-- dump date 20120504_152716 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_004786481.1 344201338 11056333 108..1532 1 NC_015945.1 PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA; COGs: COG0593 ATPase involved in DNA replication initiation; HAMAP: Chromosomal replication control, initiator DnaA; InterPro IPR003593:IPR013159:IPR001957:IPR013317; KEGG: fbc:FB2170_13478 chromosomal replication initiation protein; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal; SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core; SPTR: Chromosomal replication initiator protein dnaA; TIGRFAM: Chromosomal replication control, initiator DnaA; chromosomal replication initiator protein dnaA 1532 11056333 Murru_0001 Muricauda ruestringensis DSM 13258 chromosomal replication initiator protein dnaA YP_004786481.1 108 D 886377 CDS YP_004786482.1 344201339 11052809 1717..2169 1 NC_015945.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase; COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: fbc:FB2170_13483 phosphotyrosine protein phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; PRIAM: Acid phosphatase; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Low molecular weight phosphotyrosine protein phosphatase; protein tyrosine phosphatase 2169 11052809 Murru_0002 Muricauda ruestringensis DSM 13258 protein tyrosine phosphatase YP_004786482.1 1717 D 886377 CDS YP_004786483.1 344201340 11052810 2174..2902 1 NC_015945.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; COGs: COG0313 methyltransferase; InterPro IPR000878; KEGG: fbc:FB2170_13488 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; PFAM: Tetrapyrrole methylase; SPTR: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 2902 11052810 Murru_0003 Muricauda ruestringensis DSM 13258 uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004786483.1 2174 D 886377 CDS YP_004786484.1 344201341 11052811 complement(2949..3593) 1 NC_015945.1 KEGG: fbc:FB2170_13493 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3593 11052811 Murru_0004 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786484.1 2949 R 886377 CDS YP_004786485.1 344201342 11052812 complement(3754..4797) 1 NC_015945.1 PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family; COGs: COG1559 periplasmic solute-binding protein; InterPro IPR003770; KEGG: fbc:FB2170_13498 hypothetical protein; PFAM: Uncharacterised protein family UPF0755; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0755; aminodeoxychorismate lyase 4797 11052812 Murru_0005 Muricauda ruestringensis DSM 13258 aminodeoxychorismate lyase YP_004786485.1 3754 R 886377 CDS YP_004786486.1 344201343 11052813 complement(4787..5320) 1 NC_015945.1 PFAM: Acetyltransferase (GNAT) family; COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: fbc:FB2170_13503 putative acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Putative acetyltransferase; N-acetyltransferase GCN5 5320 11052813 Murru_0006 Muricauda ruestringensis DSM 13258 N-acetyltransferase GCN5 YP_004786486.1 4787 R 886377 CDS YP_004786487.1 344201344 11052814 complement(5308..6090) 1 NC_015945.1 PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; COGs: COG0253 Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; InterPro IPR001653; KEGG: fbc:FB2170_13508 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; SPTR: Diaminopimelate epimerase; TIGRFAM: Diaminopimelate epimerase; diaminopimelate epimerase 6090 11052814 Murru_0007 Muricauda ruestringensis DSM 13258 diaminopimelate epimerase YP_004786487.1 5308 R 886377 CDS YP_004786488.1 344201345 11052815 6226..7623 1 NC_015945.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478:IPR001254; KEGG: fbc:FB2170_13513 putative heat shock-related protease; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; PRIAM: HtrA2 peptidase; SMART: PDZ/DHR/GLGF; SPTR: Putative heat shock-related protease; HtrA2 peptidase 7623 11052815 Murru_0008 Muricauda ruestringensis DSM 13258 HtrA2 peptidase YP_004786488.1 6226 D 886377 CDS YP_004786489.1 344201346 11052816 7754..9202 1 NC_015945.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR020828:IPR006424:IPR020829; KEGG: fbc:FB2170_13518 glyceraldehyde 3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; SPTR: Glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase 9202 11052816 Murru_0009 Muricauda ruestringensis DSM 13258 glyceraldehyde-3-phosphate dehydrogenase YP_004786489.1 7754 D 886377 CDS YP_004786490.1 344201347 11052817 9309..9914 1 NC_015945.1 KEGG: rbi:RB2501_16144 tRNA (guanine-N(1)-)-methyltransferase; SPTR: tRNA (Guanine-N(1)-)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase 9914 11052817 Murru_0010 Muricauda ruestringensis DSM 13258 tRNA (guanine-N(1)-)-methyltransferase YP_004786490.1 9309 D 886377 CDS YP_004786491.1 344201348 11052818 10196..10879 1 NC_015945.1 PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; COGs: COG0336 tRNA-(guanine-N1)-methyltransferase; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; InterPro IPR002649:IPR016009; KEGG: fbc:FB2170_13533 tRNA (guanine-N(1)-)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; PRIAM: tRNA (guanine-N(1)-)-methyltransferase; SPTR: tRNA (guanine-N(1)-)-methyltransferase; TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; tRNA (guanine-N(1)-)-methyltransferase 10879 11052818 Murru_0011 Muricauda ruestringensis DSM 13258 tRNA (guanine-N(1)-)-methyltransferase YP_004786491.1 10196 D 886377 CDS YP_004786492.1 344201349 11052819 11012..11362 1 NC_015945.1 PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type; COGs: COG0335 Ribosomal protein L19; HAMAP: Ribosomal protein L19; InterPro IPR001857; KEGG: rbi:RB2501_16154 50S ribosomal protein L19; PFAM: Ribosomal protein L19; SPTR: 50S ribosomal protein L19; TIGRFAM: Ribosomal protein L19; 50S ribosomal protein L19 11362 11052819 Murru_0012 Muricauda ruestringensis DSM 13258 50S ribosomal protein L19 YP_004786492.1 11012 D 886377 CDS YP_004786493.1 344201350 11052820 11510..11653 1 NC_015945.1 hypothetical protein 11653 11052820 Murru_0013 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786493.1 11510 D 886377 CDS YP_004786494.1 344201351 11052821 11990..14209 1 NC_015945.1 PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type; COGs: COG2838 Monomeric isocitrate dehydrogenase; InterPro IPR004436; KEGG: fbc:FB2170_13543 isocitrate dehydrogenase; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; PRIAM: Isocitrate dehydrogenase (NADP(+)); SPTR: Isocitrate dehydrogenase [NADP]; TIGRFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; isocitrate dehydrogenase 14209 11052821 Murru_0014 Muricauda ruestringensis DSM 13258 isocitrate dehydrogenase YP_004786494.1 11990 D 886377 CDS YP_004786495.1 344201352 11052822 complement(14294..15613) 1 NC_015945.1 PFAM: GntP family permease; TIGRFAM: gluconate transporter; COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: sth:STH2489 GntP family permease; PFAM: Gluconate transporter; SPTR: GntP family permease; TIGRFAM: Gluconate transporter; gluconate transporter 15613 11052822 Murru_0015 Muricauda ruestringensis DSM 13258 gluconate transporter YP_004786495.1 14294 R 886377 CDS YP_004786496.1 344201353 11052823 15671..15907 1 NC_015945.1 KEGG: fbc:FB2170_13563 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 15907 11052823 Murru_0016 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786496.1 15671 D 886377 CDS YP_004786497.1 344201354 11052824 complement(15904..16623) 1 NC_015945.1 KEGG: rbi:RB2501_00025 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 16623 11052824 Murru_0017 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786497.1 15904 R 886377 CDS YP_004786498.1 344201355 11052825 16726..17814 1 NC_015945.1 PFAM: M42 glutamyl aminopeptidase; COGs: COG1363 Cellulase M and related protein; InterPro IPR008007; KEGG: fbc:FB2170_13578 endoglucanase; PFAM: Peptidase M42; PRIAM: Cellulase; SPTR: Aminopeptidase; cellulase 17814 11052825 Murru_0018 Muricauda ruestringensis DSM 13258 cellulase YP_004786498.1 16726 D 886377 CDS YP_004786499.1 344201356 11052826 17897..18445 1 NC_015945.1 PFAM: Protein of unknown function DUF91; NUDIX domain; COGs: COG1443 Isopentenyldiphosphate isomerase; InterPro IPR000086; KEGG: fbc:FB2170_13583 NUDIX family hydrolase; PFAM: NUDIX hydrolase domain; SPTR: Hydrolase of MutT (Nudix) family protein; NUDIX hydrolase 18445 11052826 Murru_0019 Muricauda ruestringensis DSM 13258 NUDIX hydrolase YP_004786499.1 17897 D 886377 CDS YP_004786500.1 344201357 11052827 complement(18429..19817) 1 NC_015945.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; COGs: COG0124 Histidyl-tRNA synthetase; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; InterPro IPR015807:IPR002314:IPR004154; KEGG: rbi:RB2501_00040 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Anticodon-binding; PRIAM: Histidine--tRNA ligase; SPTR: Histidyl-tRNA synthetase; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; histidyl-tRNA synthetase 19817 11052827 Murru_0020 Muricauda ruestringensis DSM 13258 histidyl-tRNA synthetase YP_004786500.1 18429 R 886377 CDS YP_004786501.1 344201358 11052828 complement(20110..20583) 1 NC_015945.1 KEGG: rbi:RB2501_00051 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 20583 11052828 Murru_0021 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786501.1 20110 R 886377 CDS YP_004786502.1 344201359 11052829 20769..21239 1 NC_015945.1 KEGG: zpr:ZPR_1634 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 21239 11052829 Murru_0022 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786502.1 20769 D 886377 CDS YP_004786503.1 344201360 11052830 complement(21410..21667) 1 NC_015945.1 hypothetical protein 21667 11052830 Murru_0023 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786503.1 21410 R 886377 CDS YP_004786504.1 344201361 11052831 complement(22133..22390) 1 NC_015945.1 hypothetical protein 22390 11052831 Murru_0024 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786504.1 22133 R 886377 CDS YP_004786505.1 344201362 11052832 complement(22793..23245) 1 NC_015945.1 PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9; COGs: COG0359 Ribosomal protein L9; HAMAP: Ribosomal protein L9, bacteria/chloroplast; InterPro IPR020594:IPR020070:IPR020069; KEGG: fbc:FB2170_13598 50S ribosomal protein L9; PFAM: Ribosomal protein L9, C-terminal; Ribosomal protein L9, N-terminal; SPTR: 50S ribosomal protein L9; TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; 50S ribosomal protein L9 23245 11052832 Murru_0025 Muricauda ruestringensis DSM 13258 50S ribosomal protein L9 YP_004786505.1 22793 R 886377 CDS YP_004786506.1 344201363 11052833 complement(23259..23555) 1 NC_015945.1 PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18; COGs: COG0238 Ribosomal protein S18; HAMAP: Ribosomal protein S18; InterPro IPR001648; KEGG: rbi:RB2501_00061 30S ribosomal protein S18; PFAM: Ribosomal protein S18; SPTR: 30S ribosomal protein S18; TIGRFAM: Ribosomal protein S18; 30S ribosomal protein S18 23555 11052833 Murru_0026 Muricauda ruestringensis DSM 13258 30S ribosomal protein S18 YP_004786506.1 23259 R 886377 CDS YP_004786507.1 344201364 11052834 complement(23560..23898) 1 NC_015945.1 PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6; COGs: COG0360 Ribosomal protein S6; HAMAP: Ribosomal protein S6, plastid/chloroplast; InterPro IPR000529:IPR020814; KEGG: rbi:RB2501_00066 30S ribosomal protein S6; PFAM: Ribosomal protein S6; SPTR: 30S ribosomal protein S6; TIGRFAM: Ribosomal protein S6; 30S ribosomal protein S6 23898 11052834 Murru_0027 Muricauda ruestringensis DSM 13258 30S ribosomal protein S6 YP_004786507.1 23560 R 886377 CDS YP_004786508.1 344201365 11052835 24135..24827 1 NC_015945.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: fbc:FB2170_13613 two-component system response regulator; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Two-component system response regulator protein; LytTR family two component transcriptional regulator 24827 11052835 Murru_0028 Muricauda ruestringensis DSM 13258 LytTR family two component transcriptional regulator YP_004786508.1 24135 D 886377 CDS YP_004786509.1 344201366 11052836 complement(24828..27284) 1 NC_015945.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N'; COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; InterPro IPR014001:IPR001650:IPR005259:IPR011545; KEGG: fbc:FB2170_13618 primosomal protein N'; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: Primosomal protein N'; TIGRFAM: Primosomal protein n; primosomal protein N' 27284 11052836 Murru_0029 Muricauda ruestringensis DSM 13258 primosomal protein N' YP_004786509.1 24828 R 886377 CDS YP_004786510.1 344201367 11052837 complement(27288..27737) 1 NC_015945.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2147); InterPro IPR019223; KEGG: fbc:FB2170_13623 hypothetical protein; PFAM: Protein of unknown function DUF2147; SPTR: Putative uncharacterized protein; hypothetical protein 27737 11052837 Murru_0030 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786510.1 27288 R 886377 CDS YP_004786511.1 344201368 11052838 complement(27712..28692) 1 NC_015945.1 PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); COGs: COG1295 membrane protein; InterPro IPR004664; KEGG: fbc:FB2170_13628 ribonuclease BN; PFAM: Ribonuclease BN-related; SPTR: Ribonuclease BN; ribonuclease BN 28692 11052838 Murru_0031 Muricauda ruestringensis DSM 13258 ribonuclease BN YP_004786511.1 27712 R 886377 CDS YP_004786512.1 344201369 11052839 complement(28693..29550) 1 NC_015945.1 PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR004393:IPR022412:IPR002638; KEGG: fbc:FB2170_13633 putative nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal; PRIAM: Nicotinate-nucleotide diphosphorylase (carboxylating); SPTR: Putative nicotinate-nucleotide pyrophosphorylase; TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase 29550 11052839 Murru_0032 Muricauda ruestringensis DSM 13258 nicotinate-nucleotide pyrophosphorylase YP_004786512.1 28693 R 886377 CDS YP_004786513.1 344201370 11052840 29643..30116 1 NC_015945.1 PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH; COGs: COG1576 conserved hypothetical protein; HAMAP: SPOUT methyltransferase, predicted; InterPro IPR003742; KEGG: fbc:FB2170_13638 hypothetical protein; PFAM: SPOUT methyltransferase, predicted; SPTR: Ribosomal RNA large subunit methyltransferase H; ribosomal RNA large subunit methyltransferase H 30116 11052840 Murru_0033 Muricauda ruestringensis DSM 13258 ribosomal RNA large subunit methyltransferase H YP_004786513.1 29643 D 886377 CDS YP_004786514.1 344201371 11052841 complement(30198..32090) 1 NC_015945.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; D-3-phosphoglycerate dehydrogenase; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140:IPR002912; KEGG: fbc:FB2170_13643 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; Amino acid-binding ACT; SPTR: D-3-phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein 32090 11052841 Murru_0034 Muricauda ruestringensis DSM 13258 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein YP_004786514.1 30198 R 886377 CDS YP_004786515.1 344201372 11052842 complement(32434..32886) 1 NC_015945.1 PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family; COGs: COG2020 Putative protein-S-isoprenylcysteine methyltransferase; KEGG: rbi:RB2501_00116 putative protein-S-isoprenylcysteine methyltransferase; SPTR: Predicted protein-S-isoprenylcysteine methyltransferase; putative protein-S-isoprenylcysteine methyltransferase 32886 11052842 Murru_0035 Muricauda ruestringensis DSM 13258 putative protein-S-isoprenylcysteine methyltransferase YP_004786515.1 32434 R 886377 CDS YP_004786516.1 344201373 11052843 32946..33527 1 NC_015945.1 PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; COGs: COG0127 Xanthosine triphosphate pyrophosphatase; HAMAP: Nucleoside-triphosphatase; InterPro IPR002637:IPR020922; KEGG: fjo:Fjoh_2403 putative deoxyribonucleoside-triphosphatase; PFAM: Ham1-like protein; PRIAM: Nucleoside-triphosphatase; SPTR: Nucleoside-triphosphatase; TIGRFAM: Ham1-like protein; nucleoside-triphosphatase rdgB 33527 11052843 Murru_0036 Muricauda ruestringensis DSM 13258 nucleoside-triphosphatase rdgB YP_004786516.1 32946 D 886377 CDS YP_004786517.1 344201374 11052844 33672..35432 1 NC_015945.1 PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001:IPR001650:IPR011545; KEGG: fbc:FB2170_13688 DEAD box family ATP-dependent RNA helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent RNA helicase, DEAD/DEAH box family protein; DEAD/DEAH box helicase 35432 11052844 Murru_0037 Muricauda ruestringensis DSM 13258 DEAD/DEAH box helicase YP_004786517.1 33672 D 886377 CDS YP_004786518.1 344201375 11052845 35508..36290 1 NC_015945.1 KEGG: fbc:FB2170_13698 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 36290 11052845 Murru_0038 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786518.1 35508 D 886377 CDS YP_004786519.1 344201376 11052846 36389..38071 1 NC_015945.1 PFAM: Alpha amylase, catalytic domain; COGs: COG0366 Glycosidase; InterPro IPR006589:IPR006047; KEGG: fbc:FB2170_13703 periplasmic alpha-amylase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; PRIAM: Cyclomaltodextrin glucanotransferase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Periplasmic alpha-amylase; cyclomaltodextrin glucanotransferase 38071 11052846 Murru_0039 Muricauda ruestringensis DSM 13258 cyclomaltodextrin glucanotransferase YP_004786519.1 36389 D 886377 CDS YP_004786520.1 344201377 11052847 complement(38074..38442) 1 NC_015945.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; COGs: COG3324 protein related to lactoylglutathione lyase; InterPro IPR004360; KEGG: rbi:RB2501_00141 putative glyoxalase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Putative glyoxalase; bleomycin resistance protein 38442 11052847 Murru_0040 Muricauda ruestringensis DSM 13258 bleomycin resistance protein YP_004786520.1 38074 R 886377 CDS YP_004786521.1 344201378 11052848 complement(38458..38985) 1 NC_015945.1 PFAM: Polyketide cyclase / dehydrase and lipid transport; InterPro IPR019587; KEGG: fbc:FB2170_13713 hypothetical protein; PFAM: Polyketide cyclase/dehydrase; SPTR: Putative uncharacterized protein; polyketide cyclase/dehydrase 38985 11052848 Murru_0041 Muricauda ruestringensis DSM 13258 polyketide cyclase/dehydrase YP_004786521.1 38458 R 886377 CDS YP_004786522.1 344201379 11052849 complement(39028..39681) 1 NC_015945.1 PFAM: SpoU rRNA Methylase family; COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: fbc:FB2170_13718 SpoU protein; PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: SpoU protein; tRNA/rRNA methyltransferase SpoU 39681 11052849 Murru_0042 Muricauda ruestringensis DSM 13258 tRNA/rRNA methyltransferase SpoU YP_004786522.1 39028 R 886377 CDS YP_004786523.1 344201380 11052850 39784..40791 1 NC_015945.1 PFAM: Glycosyl hydrolases family 43; COGs: COG3507 Beta-xylosidase; InterPro IPR006710; KEGG: dfe:Dfer_0193 glycoside hydrolase family 43; PFAM: Glycoside hydrolase, family 43; SPTR: Putative endo-1,4-beta-xylanase; glycoside hydrolase 40791 11052850 Murru_0043 Muricauda ruestringensis DSM 13258 glycoside hydrolase YP_004786523.1 39784 D 886377 CDS YP_004786524.1 344201381 11052851 40877..41629 1 NC_015945.1 PFAM: DJ-1/PfpI family; COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR002818; KEGG: gfo:GFO_3027 hypothetical protein; PFAM: ThiJ/PfpI; SPTR: Putative uncharacterized protein; ThiJ/PfpI domain-containing protein 41629 11052851 Murru_0044 Muricauda ruestringensis DSM 13258 ThiJ/PfpI domain-containing protein YP_004786524.1 40877 D 886377 CDS YP_004786525.1 344201382 11052852 41653..42351 1 NC_015945.1 PFAM: Sir2 family; COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; HAMAP: NAD-dependent histone deacetylase, silent information regulator Sir2; InterPro IPR003000; KEGG: cat:CA2559_08031 hypothetical protein; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2; SPTR: Putative uncharacterized protein; NAD-dependent deacetylase 42351 11052852 Murru_0045 Muricauda ruestringensis DSM 13258 NAD-dependent deacetylase YP_004786525.1 41653 D 886377 CDS YP_004786526.1 344201383 11052853 complement(42335..42787) 1 NC_015945.1 KEGG: fbc:FB2170_13728 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 42787 11052853 Murru_0046 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786526.1 42335 R 886377 CDS YP_004786527.1 344201384 11052854 42823..43395 1 NC_015945.1 KEGG: fbc:FB2170_13733 adenylosuccinate lyase; SPTR: Adenylosuccinate lyase; adenylosuccinate lyase 43395 11052854 Murru_0047 Muricauda ruestringensis DSM 13258 adenylosuccinate lyase YP_004786527.1 42823 D 886377 CDS YP_004786528.1 344201385 11052855 43442..44785 1 NC_015945.1 PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase; COGs: COG0015 Adenylosuccinate lyase; InterPro IPR004769:IPR022761:IPR013539; KEGG: cat:CA2559_06215 adenylosuccinate lyase; PFAM: Adenylosuccinate lyase C-terminal/plant; Lyase 1, N-terminal; PRIAM: Adenylosuccinate lyase; SPTR: Adenylosuccinate lyase; TIGRFAM: Adenylosuccinate lyase; adenylosuccinate lyase 44785 11052855 Murru_0048 Muricauda ruestringensis DSM 13258 adenylosuccinate lyase YP_004786528.1 43442 D 886377 CDS YP_004786529.1 344201386 11052856 complement(45154..45969) 1 NC_015945.1 PFAM: Mechanosensitive ion channel; Conserved TM helix; COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: fbc:FB2170_13748 mechanosensitive ion channel family protein; PFAM: Mechanosensitive ion channel MscS; SPTR: Mechanosensitive ion channel family protein; mechanosensitive ion channel protein MscS 45969 11052856 Murru_0049 Muricauda ruestringensis DSM 13258 mechanosensitive ion channel protein MscS YP_004786529.1 45154 R 886377 CDS YP_004786530.1 344201387 11052857 complement(46099..46638) 1 NC_015945.1 KEGG: fbc:FB2170_13753 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 46638 11052857 Murru_0050 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786530.1 46099 R 886377 CDS YP_004786531.1 344201388 11052858 complement(46752..47291) 1 NC_015945.1 KEGG: fbc:FB2170_13763 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 47291 11052858 Murru_0051 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786531.1 46752 R 886377 CDS YP_004786532.1 344201389 11052859 complement(47303..47737) 1 NC_015945.1 KEGG: fbc:FB2170_13768 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 47737 11052859 Murru_0052 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786532.1 47303 R 886377 CDS YP_004786533.1 344201390 11052860 complement(47724..48233) 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: fbc:FB2170_13773 putative ECF family RNA polymerase sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: Putative RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 48233 11052860 Murru_0053 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004786533.1 47724 R 886377 CDS YP_004786534.1 344201391 11052861 48447..49946 1 NC_015945.1 PFAM: Peptidase family S41; COGs: COG0793 Periplasmic protease; InterPro IPR005151; KEGG: fbc:FB2170_13778 carboxyl-terminal protease; PFAM: Peptidase S41; SPTR: Carboxyl-terminal protease; peptidase S41 49946 11052861 Murru_0054 Muricauda ruestringensis DSM 13258 peptidase S41 YP_004786534.1 48447 D 886377 CDS YP_004786535.1 344201392 11052862 complement(50096..50938) 1 NC_015945.1 PFAM: Enoyl-CoA hydratase/isomerase family; TIGRFAM: naphthoate synthase (dihydroxynaphthoic acid synthetase); COGs: COG0447 Dihydroxynaphthoic acid synthase; InterPro IPR010198:IPR001753; KEGG: ran:Riean_0298 1,4-dihydroxy-2-naphthoate synthase; PFAM: Crotonase, core; PRIAM: Naphthoate synthase; SPTR: Naphthoate synthase; TIGRFAM: Naphthoate synthase; naphthoate synthase 50938 11052862 Murru_0055 Muricauda ruestringensis DSM 13258 naphthoate synthase YP_004786535.1 50096 R 886377 CDS YP_004786536.1 344201393 11052863 51136..51723 1 NC_015945.1 PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: lby:Lbys_0815 transcriptional regulator, crp/fnr family; PFAM: Cyclic nucleotide-binding domain; SPTR: Cyclic nucleotide binding regulatory protein; putative Crp/Fnr family transcriptional regulator 51723 11052863 Murru_0056 Muricauda ruestringensis DSM 13258 putative Crp/Fnr family transcriptional regulator YP_004786536.1 51136 D 886377 CDS YP_004786537.1 344201394 11052864 51789..52229 1 NC_015945.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain; COGs: COG2128 conserved hypothetical protein; InterPro IPR004675:IPR003779; KEGG: chu:CHU_1943 hypothetical protein; PFAM: Carboxymuconolactone decarboxylase; SPTR: Alkylhydroperoxidase; TIGRFAM: Alkylhydroperoxidase AhpD core; alkylhydroperoxidase 52229 11052864 Murru_0057 Muricauda ruestringensis DSM 13258 alkylhydroperoxidase YP_004786537.1 51789 D 886377 CDS YP_004786538.1 344201395 11052865 52423..53010 1 NC_015945.1 KEGG: hch:HCH_06797 Tfp pilus assembly protein, major pilin PilA; SPTR: Putative uncharacterized protein; hypothetical protein 53010 11052865 Murru_0058 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786538.1 52423 D 886377 CDS YP_004786539.1 344201396 11052866 complement(53050..55902) 1 NC_015945.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterPro IPR006275:IPR005481:IPR005479:IPR005480; KEGG: fbc:FB2170_13823 carbamoyl-phosphate synthase large subunit; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Carbamoyl-phosphate synthetase, large subunit, oligomerisation; PRIAM: Carbamoyl-phosphate synthase (ammonia); SPTR: Carbamoyl-phosphate synthase, large subunit; TIGRFAM: Carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit 55902 11052866 Murru_0059 Muricauda ruestringensis DSM 13258 carbamoyl-phosphate synthase large subunit YP_004786539.1 53050 R 886377 CDS YP_004786540.1 344201397 11052867 complement(55996..56154) 1 NC_015945.1 PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; HAMAP: Ribosomal protein L34; InterPro IPR000271; KEGG: coc:Coch_0279 ribosomal protein L34; PFAM: Ribosomal protein L34; SPTR: 50S ribosomal protein L34; TIGRFAM: Ribosomal protein L34; 50S ribosomal protein L34 56154 11052867 Murru_0060 Muricauda ruestringensis DSM 13258 50S ribosomal protein L34 YP_004786540.1 55996 R 886377 CDS YP_004786541.1 344201398 11052868 56324..56839 1 NC_015945.1 KEGG: fbc:FB2170_13833 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 56839 11052868 Murru_0061 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786541.1 56324 D 886377 CDS YP_004786542.1 344201399 11052869 complement(56848..57003) 1 NC_015945.1 hypothetical protein 57003 11052869 Murru_0062 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786542.1 56848 R 886377 CDS YP_004786543.1 344201400 11052870 57107..57355 1 NC_015945.1 KEGG: cts:Ctha_0277 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 57355 11052870 Murru_0063 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786543.1 57107 D 886377 CDS YP_004786544.1 344201401 11052871 57356..57778 1 NC_015945.1 PFAM: PIN domain; InterPro IPR002716; KEGG: zpr:ZPR_4525 PilT domain-containing protein; PFAM: PilT protein, N-terminal; SPTR: PilT domain-containing protein; PilT protein domain-containing protein 57778 11052871 Murru_0064 Muricauda ruestringensis DSM 13258 PilT protein domain-containing protein YP_004786544.1 57356 D 886377 CDS YP_004786545.1 344201402 11052872 58050..58943 1 NC_015945.1 KEGG: fjo:Fjoh_0893 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 58943 11052872 Murru_0065 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786545.1 58050 D 886377 CDS YP_004786546.1 344201403 11052873 complement(59067..60032) 1 NC_015945.1 PFAM: Transglycosylase SLT domain; InterPro IPR008258; KEGG: fbc:FB2170_13838 putative membrane-bound lytic murein transglycosylase; PFAM: Lytic transglycosylase-like, catalytic; SPTR: Putative membrane-bound lytic murein transglycosylase; lytic transglycosylase 60032 11052873 Murru_0066 Muricauda ruestringensis DSM 13258 lytic transglycosylase YP_004786546.1 59067 R 886377 CDS YP_004786547.1 344201404 11052874 complement(60081..60743) 1 NC_015945.1 KEGG: fbc:FB2170_13843 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 60743 11052874 Murru_0067 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786547.1 60081 R 886377 CDS YP_004786548.1 344201405 11052875 60908..61201 1 NC_015945.1 KEGG: fbc:FB2170_13848 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 61201 11052875 Murru_0068 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786548.1 60908 D 886377 CDS YP_004786549.1 344201406 11052876 complement(61254..62582) 1 NC_015945.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; radical SAM methylthiotransferase, MiaB/RimO family; COGs: COG0621 2-methylthioadenine synthetase; InterProIPR006638:IPR005839:IPR006467:IPR013848:IPR 007197; KEGG: zpr:ZPR_2038 possible 2-methylthioadenine synthetase; PFAM: Methylthiotransferase, N-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein; TIGRFAM: MiaB-like tRNA modifying enzyme; Methylthiotransferase; MiaB-like tRNA modifying enzyme 62582 11052876 Murru_0069 Muricauda ruestringensis DSM 13258 MiaB-like tRNA modifying enzyme YP_004786549.1 61254 R 886377 CDS YP_004786550.1 344201407 11052877 62843..64144 1 NC_015945.1 PFAM: Alpha-L-fucosidase; COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933; KEGG: fbc:FB2170_04995 putative exported alpha-L-fucosidase protein; PFAM: Glycoside hydrolase, family 29; SMART: Glycoside hydrolase, family 29; SPTR: Putative exported alpha-L-fucosidase protein; glycoside hydrolase 64144 11052877 Murru_0070 Muricauda ruestringensis DSM 13258 glycoside hydrolase YP_004786550.1 62843 D 886377 CDS YP_004786551.1 344201408 11052878 64160..64567 1 NC_015945.1 PFAM: Antibiotic biosynthesis monooxygenase; InterPro IPR007138; KEGG: rbi:RB2501_12207 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Putative uncharacterized protein; antibiotic biosynthesis monooxygenase 64567 11052878 Murru_0071 Muricauda ruestringensis DSM 13258 antibiotic biosynthesis monooxygenase YP_004786551.1 64160 D 886377 CDS YP_004786552.1 344201409 11052879 64722..66767 1 NC_015945.1 PFAM: Amidohydrolase family; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: mtt:Ftrac_0661 amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase family protein; amidohydrolase 66767 11052879 Murru_0072 Muricauda ruestringensis DSM 13258 amidohydrolase YP_004786552.1 64722 D 886377 CDS YP_004786553.1 344201410 11052880 66902..68494 1 NC_015945.1 PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: rbi:RB2501_06320 beta-lactamase precursor (penicillin-binding protein); PFAM: Beta-lactamase-related; SPTR: Hypothetical beta-lactamase (Penicillin-binding protein); beta-lactamase 68494 11052880 Murru_0073 Muricauda ruestringensis DSM 13258 beta-lactamase YP_004786553.1 66902 D 886377 CDS YP_004786554.1 344201411 11052881 68733..69938 1 NC_015945.1 PFAM: Domain of unknown function (DUF955); InterPro IPR010359; KEGG: shl:Shal_0836 hypothetical protein; PFAM: Protein of unknown function DUF955; SPTR: Putative uncharacterized protein; hypothetical protein 69938 11052881 Murru_0074 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786554.1 68733 D 886377 CDS YP_004786555.1 344201412 11052882 69931..70869 1 NC_015945.1 PFAM: HNH endonuclease; KEGG: cpc:Cpar_1031 HNH endonuclease; SPTR: HNH endonuclease; hypothetical protein 70869 11052882 Murru_0075 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786555.1 69931 D 886377 CDS YP_004786556.1 344201413 11052883 71075..71449 1 NC_015945.1 hypothetical protein 71449 11052883 Murru_0076 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786556.1 71075 D 886377 CDS YP_004786557.1 344201414 11052884 71514..73142 1 NC_015945.1 PFAM: Calcineurin-like phosphoesterase; 5'-nucleotidase, C-terminal domain; COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR004843:IPR008334; KEGG: gfo:GFO_1276 periplasmic 5'-nucleotidase; PFAM: 5'-Nucleotidase, C-terminal; Metallo-dependent phosphatase; PRIAM: 5'-nucleotidase; SPTR: Periplasmic 5'-nucleotidase; 5'-nucleotidase 73142 11052884 Murru_0077 Muricauda ruestringensis DSM 13258 5'-nucleotidase YP_004786557.1 71514 D 886377 CDS YP_004786558.1 344201415 11052885 73152..73550 1 NC_015945.1 PFAM: DoxX; InterPro IPR011637; KEGG: gfo:GFO_1274 DoxX domain; PFAM: Uncharacterised protein family YphA; SPTR: Membrane protein containing DoxX domain; DoxX family protein 73550 11052885 Murru_0078 Muricauda ruestringensis DSM 13258 DoxX family protein YP_004786558.1 73152 D 886377 CDS YP_004786559.1 344201416 11052886 73552..73977 1 NC_015945.1 PFAM: DsrE/DsrF-like family; KEGG: cat:CA2559_11798 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 73977 11052886 Murru_0079 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786559.1 73552 D 886377 CDS YP_004786560.1 344201417 11052887 complement(74063..75877) 1 NC_015945.1 PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: putative hydrolase, CocE/NonD family; COGs: COG2936 acyl esterase; InterPro IPR013736:IPR005674:IPR000383; KEGG: fbc:FB2170_11806 acylase; SMART: Peptidase S15/CocE/NonD, C-terminal; SPTR: Acylase, putative; TIGRFAM: CocE/NonD hydrolase; hydrolase 75877 11052887 Murru_0080 Muricauda ruestringensis DSM 13258 hydrolase YP_004786560.1 74063 R 886377 CDS YP_004786561.1 344201418 11052888 complement(75966..76691) 1 NC_015945.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: mtt:Ftrac_1295 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SMART: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SPTR: Two-component system, regulatory protein; LytTR family two component transcriptional regulator 76691 11052888 Murru_0081 Muricauda ruestringensis DSM 13258 LytTR family two component transcriptional regulator YP_004786561.1 75966 R 886377 CDS YP_004786562.1 344201419 11052889 complement(76688..77749) 1 NC_015945.1 PFAM: Histidine kinase; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559:IPR003594; KEGG: mtt:Ftrac_1294 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; ATPase-like, ATP-binding domain; SPTR: Putative transmembrane sensor histidine kinase transcription regulator protein; putative signal transduction histidine kinase 77749 11052889 Murru_0082 Muricauda ruestringensis DSM 13258 putative signal transduction histidine kinase YP_004786562.1 76688 R 886377 CDS YP_004786563.1 344201420 11052891 complement(78691..79869) 1 NC_015945.1 TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; KEGG: fps:FP1134 sugar phosphate nucleotydyl transferase; SPTR: 50S ribosomal protein L34; sugar phosphate nucleotidyl transferase 79869 11052891 Murru_0084 Muricauda ruestringensis DSM 13258 sugar phosphate nucleotidyl transferase YP_004786563.1 78691 R 886377 CDS YP_004786564.1 344201421 11052892 complement(79953..80222) 1 NC_015945.1 PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; COGs: COG0254 Ribosomal protein L31; InterPro IPR002150; KEGG: rbi:RB2501_00331 50S ribosomal protein L31 type B; PFAM: Ribosomal protein L31; SPTR: 50S ribosomal protein L31; TIGRFAM: Ribosomal protein L31; 50S ribosomal protein L31 80222 11052892 Murru_0085 Muricauda ruestringensis DSM 13258 50S ribosomal protein L31 YP_004786564.1 79953 R 886377 CDS YP_004786565.1 344201422 11052893 80382..80903 1 NC_015945.1 KEGG: fbc:FB2170_13868 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 80903 11052893 Murru_0086 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786565.1 80382 D 886377 CDS YP_004786566.1 344201423 11052894 80945..81892 1 NC_015945.1 PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fbc:FB2170_13873 putative glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Putative glycosyltransferase; family 2 glycosyl transferase 81892 11052894 Murru_0087 Muricauda ruestringensis DSM 13258 family 2 glycosyl transferase YP_004786566.1 80945 D 886377 CDS YP_004786567.1 344201424 11052895 81951..83657 1 NC_015945.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; COGs: COG1109 Phosphomannomutase; InterPro IPR005844:IPR005845:IPR005846; KEGG: fbc:FB2170_13878 phosphoglucomutase phosphomannomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; SPTR: Phosphoglucomutase phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 83657 11052895 Murru_0088 Muricauda ruestringensis DSM 13258 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I YP_004786567.1 81951 D 886377 CDS YP_004786568.1 344201425 11052896 83662..85488 1 NC_015945.1 PFAM: ABC transporter; ABC transporter transmembrane region; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: fbc:FB2170_13883 MsbA family ABC transporter ATP-binding protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein, MsbA family; xenobiotic-transporting ATPase 85488 11052896 Murru_0089 Muricauda ruestringensis DSM 13258 xenobiotic-transporting ATPase YP_004786568.1 83662 D 886377 CDS YP_004786569.1 344201426 11052897 complement(85779..86810) 1 NC_015945.1 PFAM: BNR/Asp-box repeat; KEGG: fbc:FB2170_13908 putative oxidoreductase; SPTR: Putative oxidoreductase; putative oxidoreductase 86810 11052897 Murru_0090 Muricauda ruestringensis DSM 13258 putative oxidoreductase YP_004786569.1 85779 R 886377 CDS YP_004786570.1 344201427 11052898 86870..88081 1 NC_015945.1 PFAM: NOL1/NOP2/sun family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB; COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR001678; KEGG: fbc:FB2170_13918 putative sun protein; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; SPTR: Putative sun protein; Fmu (Sun) domain-containing protein 88081 11052898 Murru_0091 Muricauda ruestringensis DSM 13258 Fmu (Sun) domain-containing protein YP_004786570.1 86870 D 886377 CDS YP_004786571.1 344201428 11052899 88202..89044 1 NC_015945.1 PFAM: short chain dehydrogenase; COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: cpi:Cpin_6378 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 89044 11052899 Murru_0092 Muricauda ruestringensis DSM 13258 3-oxoacyl-ACP reductase YP_004786571.1 88202 D 886377 CDS YP_004786572.1 344201429 11052900 89100..90002 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: fjo:Fjoh_4692 helix-turn-helix domain-containing protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family protein; AraC family transcriptional regulator 90002 11052900 Murru_0093 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004786572.1 89100 D 886377 CDS YP_004786573.1 344201430 11052901 complement(90295..91887) 1 NC_015945.1 TIGRFAM: amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; KEGG: fbc:FB2170_13923 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 91887 11052901 Murru_0094 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786573.1 90295 R 886377 CDS YP_004786574.1 344201431 11052902 92690..96391 1 NC_015945.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, single chain form; COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain; InterPro IPR000728:IPR010918; KEGG: fbc:FB2170_13928 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: Phosphoribosylformylglycinamidine synthase; phosphoribosylformylglycinamidine synthase 96391 11052902 Murru_0095 Muricauda ruestringensis DSM 13258 phosphoribosylformylglycinamidine synthase YP_004786574.1 92690 D 886377 CDS YP_004786575.1 344201432 11052903 96519..98288 1 NC_015945.1 PFAM: AMP-binding enzyme; COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: rbi:RB2501_00401 putative long chain fatty-acid CoA ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: Probable long chain fatty-acid CoA ligase; long-chain-fatty-acid--CoA ligase 98288 11052903 Murru_0096 Muricauda ruestringensis DSM 13258 long-chain-fatty-acid--CoA ligase YP_004786575.1 96519 D 886377 CDS YP_004786576.1 344201433 11052904 complement(98494..99636) 1 NC_015945.1 PFAM: Mycoplasma protein of unknown function, DUF285; InterPro IPR011889:IPR005046; KEGG: mtt:Ftrac_0811 lipoprotein; PFAM: Protein of unknown function DUF285, lipoprotein predicted; SPTR: Transmembrane protein, putative; TIGRFAM: Bacterial surface protein 26-residue repeat; lipoprotein 99636 11052904 Murru_0097 Muricauda ruestringensis DSM 13258 lipoprotein YP_004786576.1 98494 R 886377 CDS YP_004786577.1 344201434 11052905 99837..100286 1 NC_015945.1 PFAM: MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: fbc:FB2170_13958 hypothetical protein; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Putative uncharacterized protein; MarR family transcriptional regulator 100286 11052905 Murru_0098 Muricauda ruestringensis DSM 13258 MarR family transcriptional regulator YP_004786577.1 99837 D 886377 CDS YP_004786578.1 344201435 11052906 100302..102728 1 NC_015945.1 PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176:IPR006108:IPR001753; KEGG: fbc:FB2170_13963 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase/carnithine racemase fusion; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; SPTR: 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase/carnithine racemase fusion; 3-hydroxyacyl-CoA dehydrogenase 102728 11052906 Murru_0099 Muricauda ruestringensis DSM 13258 3-hydroxyacyl-CoA dehydrogenase YP_004786578.1 100302 D 886377 CDS YP_004786579.1 344201436 11052907 102762..103121 1 NC_015945.1 PFAM: S23 ribosomal protein; InterPro IPR008815; KEGG: mtt:Ftrac_1685 s23 ribosomal protein; PFAM: 23S rRNA-associated protein; SPTR: Putative uncharacterized protein; S23 ribosomal protein 103121 11052907 Murru_0100 Muricauda ruestringensis DSM 13258 S23 ribosomal protein YP_004786579.1 102762 D 886377 CDS YP_004786580.1 344201437 11052908 103172..104365 1 NC_015945.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR020616:IPR020617; KEGG: cat:CA2559_06175 acetyl-CoA acyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; PRIAM: Acetyl-CoA C-acyltransferase; SPTR: Acetyl-CoA acyltransferase; TIGRFAM: Thiolase; acetyl-CoA acetyltransferase 104365 11052908 Murru_0101 Muricauda ruestringensis DSM 13258 acetyl-CoA acetyltransferase YP_004786580.1 103172 D 886377 CDS YP_004786581.1 344201438 11052909 104396..104752 1 NC_015945.1 PFAM: S23 ribosomal protein; InterPro IPR008815; KEGG: mtt:Ftrac_1685 s23 ribosomal protein; PFAM: 23S rRNA-associated protein; SPTR: Putative uncharacterized protein; S23 ribosomal protein 104752 11052909 Murru_0102 Muricauda ruestringensis DSM 13258 S23 ribosomal protein YP_004786581.1 104396 D 886377 CDS YP_004786582.1 344201439 11052910 104793..106604 1 NC_015945.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: fbc:FB2170_13973 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; PRIAM: Butyryl-CoA dehydrogenase; SPTR: Acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase 106604 11052910 Murru_0103 Muricauda ruestringensis DSM 13258 butyryl-CoA dehydrogenase YP_004786582.1 104793 D 886377 CDS YP_004786583.1 344201440 11052911 complement(106789..108588) 1 NC_015945.1 PFAM: Glycosyl hydrolases family 15; COGs: COG3387 Glucoamylase and related glycosyl hydrolase; InterPro IPR011613; KEGG: fbc:FB2170_13993 glycoside hydrolase, family 15; PFAM: Glycoside hydrolase 15-related; SPTR: Glycoside hydrolase, family 15; glycoside hydrolase 15-like protein 108588 11052911 Murru_0104 Muricauda ruestringensis DSM 13258 glycoside hydrolase 15-like protein YP_004786583.1 106789 R 886377 CDS YP_004786584.1 344201441 11052912 108692..110902 1 NC_015945.1 PFAM: Trehalose-phosphatase; Glycosyltransferase family 20; TIGRFAM: trehalose-phosphatase; alpha,alpha-trehalose-phosphate synthase [UDP-forming]; HAD-superfamily hydrolase, subfamily IIB; COGs: COG0380 Trehalose-6-phosphate synthase; InterPro IPR003337:IPR006379:IPR001830; KEGG: fbc:FB2170_13998 trehalose-6-phosphate synthase; PFAM: Glycosyl transferase, family 20; Trehalose-phosphatase; PRIAM: Alpha,alpha-trehalose-phosphate synthase (UDP-forming)., Trehalose-phosphatase; SPTR: Trehalose-6-phosphate synthase; TIGRFAM: Trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; trehalose-phosphatase 110902 11052912 Murru_0105 Muricauda ruestringensis DSM 13258 trehalose-phosphatase YP_004786584.1 108692 D 886377 CDS YP_004786585.1 344201442 11052913 110899..112419 1 NC_015945.1 PFAM: SnoaL-like polyketide cyclase; COGs: COG4538 conserved hypothetical protein; InterPro IPR009959; KEGG: fbc:FB2170_14003 putative steroid delta-isomerase domain-containing protein; PFAM: Protein of unknown function DUF1486; SPTR: Putative steroid delta-isomerase domain protein; hypothetical protein 112419 11052913 Murru_0106 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786585.1 110899 D 886377 CDS YP_004786586.1 344201443 11052914 112457..113788 1 NC_015945.1 PFAM: Peptidase family M28; COGs: COG2234 aminopeptidase; InterPro IPR003961:IPR007484; KEGG: fbc:FB2170_14008 leucine aminopeptidase-like protein; PFAM: Peptidase M28; Fibronectin, type III; SMART: Fibronectin, type III; SPTR: Leucine aminopeptidase-related protein; peptidase M28 113788 11052914 Murru_0107 Muricauda ruestringensis DSM 13258 peptidase M28 YP_004786586.1 112457 D 886377 CDS YP_004786587.1 344201444 11052915 113975..115585 1 NC_015945.1 PFAM: Peptidase family M1; COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: fbc:FB2170_14013 aminopeptidase M1 family protein; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; SPTR: Aminopeptidase M1 family protein; peptidase M1 membrane alanine aminopeptidase 115585 11052915 Murru_0108 Muricauda ruestringensis DSM 13258 peptidase M1 membrane alanine aminopeptidase YP_004786587.1 113975 D 886377 CDS YP_004786588.1 344201445 11052916 complement(115770..119153) 1 NC_015945.1 PFAM: Trehalose utilisation; PKD domain; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR022409:IPR000601:IPR003088; KEGG: fbc:FB2170_14068 putative glycosyl hydrolase; PFAM: PKD domain; Cytochrome c, class I; SMART: PKD/Chitinase domain; SPTR: Putative glycosyl hydrolase (Putative secreted protein); PKD domain-containing protein 119153 11052916 Murru_0109 Muricauda ruestringensis DSM 13258 PKD domain-containing protein YP_004786588.1 115770 R 886377 CDS YP_004786589.1 344201446 11052917 complement(119377..120687) 1 NC_015945.1 PFAM: Major Facilitator Superfamily; COGs: COG2271 Sugar phosphate permease; InterPro IPR011701; KEGG: fbc:FB2170_09426 major facilitator superfamily transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily (MFS_1) transporter; major facilitator superfamily protein 120687 11052917 Murru_0110 Muricauda ruestringensis DSM 13258 major facilitator superfamily protein YP_004786589.1 119377 R 886377 CDS YP_004786590.1 344201447 11052918 120736..122142 1 NC_015945.1 PFAM: Amidohydrolase family; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: zpr:ZPR_2069 putative amidohydrolase family protein; PFAM: Amidohydrolase 1; SPTR: Putative amidohydrolase family protein; amidohydrolase 122142 11052918 Murru_0111 Muricauda ruestringensis DSM 13258 amidohydrolase YP_004786590.1 120736 D 886377 CDS YP_004786591.1 344201448 11052919 122237..122929 1 NC_015945.1 PFAM: Protein of unknown function (DUF2490); InterPro IPR019619; KEGG: rbi:RB2501_00581 hypothetical protein; PFAM: Protein of unknown function DUF2490; SPTR: Putative uncharacterized protein; hypothetical protein 122929 11052919 Murru_0112 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786591.1 122237 D 886377 CDS YP_004786592.1 344201449 11052920 122994..123581 1 NC_015945.1 PFAM: Copper/zinc superoxide dismutase (SODC); COGs: COG2032 Cu/Zn superoxide dismutase; InterPro IPR001424; KEGG: rbi:RB2501_00596 copper/zinc superoxide dismutase; PFAM: Superoxide dismutase, copper/zinc binding; SPTR: Superoxide dismutase [Cu-Zn]; superoxide dismutase copper/zinc binding protein 123581 11052920 Murru_0113 Muricauda ruestringensis DSM 13258 superoxide dismutase copper/zinc binding protein YP_004786592.1 122994 D 886377 CDS YP_004786593.1 344201450 11052921 123686..124312 1 NC_015945.1 PFAM: YceI-like domain; InterPro IPR007372; KEGG: fbc:FB2170_14108 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: Putative uncharacterized protein; hypothetical protein 124312 11052921 Murru_0114 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786593.1 123686 D 886377 CDS YP_004786594.1 344201451 11052922 124389..124916 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR007630; KEGG: rbi:RB2501_00601 putative RNA polymerase sigma factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 124916 11052922 Murru_0115 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004786594.1 124389 D 886377 CDS YP_004786595.1 344201452 11052923 124919..125716 1 NC_015945.1 PFAM: Anti-sigma-K factor rskA; InterPro IPR018764; KEGG: rbi:RB2501_00606 hypothetical protein; PFAM: Anti-sigma K factor RskA; SPTR: Putative uncharacterized protein; anti-sigma-K factor RskA 125716 11052923 Murru_0116 Muricauda ruestringensis DSM 13258 anti-sigma-K factor RskA YP_004786595.1 124919 D 886377 CDS YP_004786596.1 344201453 11052924 complement(125713..126693) 1 NC_015945.1 PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA); COGs: COG0598 Mg2+ and Co2+ transporter; InterPro IPR002523; KEGG: zpr:ZPR_2010 magnesium and cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like; SPTR: Mg and Co transport protein CorA; Mg2 transporter protein CorA family protein 126693 11052924 Murru_0117 Muricauda ruestringensis DSM 13258 Mg2 transporter protein CorA family protein YP_004786596.1 125713 R 886377 CDS YP_004786597.1 344201454 11052925 126764..127300 1 NC_015945.1 PFAM: Mechanosensitive ion channel; InterPro IPR006685; KEGG: zpr:ZPR_2321 small-conductance mechanosensitive ion channel protein; PFAM: Mechanosensitive ion channel MscS; SPTR: Putative uncharacterized protein; mechanosensitive ion channel protein MscS 127300 11052925 Murru_0118 Muricauda ruestringensis DSM 13258 mechanosensitive ion channel protein MscS YP_004786597.1 126764 D 886377 CDS YP_004786598.1 344201455 11052926 complement(127391..128680) 1 NC_015945.1 InterPro IPR019734; KEGG: rbi:RB2501_00621 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 128680 11052926 Murru_0119 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786598.1 127391 R 886377 CDS YP_004786599.1 344201456 11052927 complement(128856..129596) 1 NC_015945.1 KEGG: rbi:RB2501_00626 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 129596 11052927 Murru_0120 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786599.1 128856 R 886377 CDS YP_004786600.1 344201457 11052928 complement(129617..130309) 1 NC_015945.1 KEGG: rbi:RB2501_00631 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 130309 11052928 Murru_0121 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786600.1 129617 R 886377 CDS YP_004786601.1 344201458 11052929 130476..131666 1 NC_015945.1 PFAM: LETM1-like protein; InterPro IPR011685; KEGG: fbc:FB2170_14113 hypothetical protein; PFAM: LETM1-like; SPTR: Putative uncharacterized protein; LETM1-like domain-containing protein 131666 11052929 Murru_0122 Muricauda ruestringensis DSM 13258 LETM1-like domain-containing protein YP_004786601.1 130476 D 886377 CDS YP_004786602.1 344201459 11052930 complement(131757..132512) 1 NC_015945.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: fbc:FB2170_14118 two-component system response regulator; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Two-component system response regulator; LytTR family two component transcriptional regulator 132512 11052930 Murru_0123 Muricauda ruestringensis DSM 13258 LytTR family two component transcriptional regulator YP_004786602.1 131757 R 886377 CDS YP_004786603.1 344201460 11052931 complement(132553..132837) 1 NC_015945.1 KEGG: fbc:FB2170_14123 hypothetical protein; SPTR: Putative integron gene cassette protein; hypothetical protein 132837 11052931 Murru_0124 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786603.1 132553 R 886377 CDS YP_004786604.1 344201461 11052932 complement(132843..133175) 1 NC_015945.1 KEGG: fbc:FB2170_14128 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 133175 11052932 Murru_0125 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786604.1 132843 R 886377 CDS YP_004786605.1 344201462 11052933 complement(133180..133485) 1 NC_015945.1 KEGG: fbc:FB2170_14128 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 133485 11052933 Murru_0126 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786605.1 133180 R 886377 CDS YP_004786606.1 344201463 11052934 complement(133488..133832) 1 NC_015945.1 KEGG: fbc:FB2170_14133 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 133832 11052934 Murru_0127 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786606.1 133488 R 886377 CDS YP_004786607.1 344201464 11052936 complement(134431..135759) 1 NC_015945.1 PFAM: Histidine kinase; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: rbi:RB2501_00661 hypothetical protein; PFAM: Signal transduction histidine kinase, internal region; SPTR: Putative uncharacterized protein; putative signal transduction histidine kinase 135759 11052936 Murru_0129 Muricauda ruestringensis DSM 13258 putative signal transduction histidine kinase YP_004786607.1 134431 R 886377 CDS YP_004786608.1 344201465 11052937 complement(135766..136389) 1 NC_015945.1 KEGG: fbc:FB2170_14143 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 136389 11052937 Murru_0130 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786608.1 135766 R 886377 CDS YP_004786609.1 344201466 11052938 136700..137311 1 NC_015945.1 PFAM: Putative FMN-binding domain; COGs: COG2808 Transcriptional regulator; InterPro IPR007396; KEGG: fbc:FB2170_14218 putative transcriptional regulator; PFAM: Negative transcriptional regulator; SPTR: Probable transcriptional regulator; FMN-binding negative transcriptional regulator 137311 11052938 Murru_0131 Muricauda ruestringensis DSM 13258 FMN-binding negative transcriptional regulator YP_004786609.1 136700 D 886377 CDS YP_004786610.1 344201467 11052939 complement(137315..139102) 1 NC_015945.1 PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: rbi:RB2501_06865 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein 139102 11052939 Murru_0132 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786610.1 137315 R 886377 CDS YP_004786611.1 344201468 11052940 139375..139854 1 NC_015945.1 PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: sli:Slin_6080 transcriptional regulator, MarR family with acetyltransferase activity; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Transcriptional regulator, MarR family; N-acetyltransferase GCN5 139854 11052940 Murru_0133 Muricauda ruestringensis DSM 13258 N-acetyltransferase GCN5 YP_004786611.1 139375 D 886377 CDS YP_004786612.1 344201469 11052941 139973..140395 1 NC_015945.1 PFAM: DoxX; InterPro IPR011637; KEGG: fjo:Fjoh_2545 DoxX family protein; PFAM: Uncharacterised protein family YphA; SPTR: DoxX family protein; DoxX family protein 140395 11052941 Murru_0134 Muricauda ruestringensis DSM 13258 DoxX family protein YP_004786612.1 139973 D 886377 CDS YP_004786613.1 344201470 11052942 complement(140397..142559) 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; InterPro IPR012910; KEGG: fbc:FB2170_14293 hypothetical protein; PFAM: TonB-dependent receptor, plug; SPTR: Putative uncharacterized protein; TonB-dependent receptor plug 142559 11052942 Murru_0135 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004786613.1 140397 R 886377 CDS YP_004786614.1 344201471 11052943 142773..143192 1 NC_015945.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2141); COGs: COG4704 conserved hypothetical protein; InterPro IPR018673; KEGG: rbi:RB2501_00691 hypothetical protein; PFAM: Protein of unknown function DUF2141; SPTR: Putative uncharacterized protein; hypothetical protein 143192 11052943 Murru_0136 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786614.1 142773 D 886377 CDS YP_004786615.1 344201472 11052944 143471..144412 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: fbc:FB2170_14333 LysR family transcriptional regulator; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; SPTR: Transcriptional regulator, LysR family protein; LysR family transcriptional regulator 144412 11052944 Murru_0137 Muricauda ruestringensis DSM 13258 LysR family transcriptional regulator YP_004786615.1 143471 D 886377 CDS YP_004786616.1 344201473 11052945 complement(144445..144642) 1 NC_015945.1 KEGG: fbc:FB2170_14343 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 144642 11052945 Murru_0138 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786616.1 144445 R 886377 CDS YP_004786617.1 344201474 11052946 144764..146047 1 NC_015945.1 PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; COGs: COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4); InterPro IPR000667; KEGG: fbc:FB2170_14348 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; SPTR: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; peptidase S13 D-Ala-D-Ala carboxypeptidase C 146047 11052946 Murru_0139 Muricauda ruestringensis DSM 13258 peptidase S13 D-Ala-D-Ala carboxypeptidase C YP_004786617.1 144764 D 886377 CDS YP_004786618.1 344201475 11052947 complement(146041..146745) 1 NC_015945.1 PFAM: NUDIX domain; TIGRFAM: nudix-type nucleoside diphosphatase, YffH/AdpP family; InterPro IPR004385:IPR000086; KEGG: fbc:FB2170_14353 hypothetical protein; PFAM: NUDIX hydrolase domain; SPTR: Putative uncharacterized protein; TIGRFAM: Nucleoside diphosphate pyrophosphatase; nucleoside diphosphate pyrophosphatase 146745 11052947 Murru_0140 Muricauda ruestringensis DSM 13258 nucleoside diphosphate pyrophosphatase YP_004786618.1 146041 R 886377 CDS YP_004786619.1 344201476 11052948 146756..148312 1 NC_015945.1 PFAM: MlrC C-terminus; Protein of unknown function (DUF1485); COGs: COG5476 conserved hypothetical protein; InterPro IPR015995:IPR010799; KEGG: rbi:RB2501_00721 hypothetical protein; PFAM: Microcystin LR degradation protein MlrC, N-terminal; Microcystin LR degradation protein MlrC, C-terminal; SPTR: Putative uncharacterized protein; microcystin LR degradation protein MlrC 148312 11052948 Murru_0141 Muricauda ruestringensis DSM 13258 microcystin LR degradation protein MlrC YP_004786619.1 146756 D 886377 CDS YP_004786620.1 344201477 11052949 complement(148309..148962) 1 NC_015945.1 PFAM: Conserved hypothetical protein (DUF2461); TIGRFAM: TIGR02453 family protein; COGs: COG5587 conserved hypothetical protein; InterPro IPR012808; KEGG: gfo:GFO_0463 hypothetical protein; PFAM: Conserved hypothetical protein CHP02453; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02453; hypothetical protein 148962 11052949 Murru_0142 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786620.1 148309 R 886377 CDS YP_004786621.1 344201478 11052950 complement(149035..149397) 1 NC_015945.1 PFAM: S23 ribosomal protein; InterPro IPR008815; KEGG: fba:FIC_01190 S23 ribosomal protein; PFAM: 23S rRNA-associated protein; SPTR: S23 ribosomal protein; S23 ribosomal protein 149397 11052950 Murru_0143 Muricauda ruestringensis DSM 13258 S23 ribosomal protein YP_004786621.1 149035 R 886377 CDS YP_004786622.1 344201479 11052951 complement(149466..150266) 1 NC_015945.1 PFAM: Protein of unknown function DUF124; TIGRFAM: TIGR00266 family protein; COGs: COG2013 conserved hypothetical protein; InterPro IPR002838; KEGG: fbc:FB2170_14358 hypothetical protein; PFAM: Protein of unknown function DUF124; SPTR: Putative uncharacterized protein; TIGRFAM: Protein of unknown function DUF124; hypothetical protein 150266 11052951 Murru_0144 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786622.1 149466 R 886377 CDS YP_004786623.1 344201480 11052952 complement(150351..150806) 1 NC_015945.1 KEGG: cat:CA2559_09568 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 150806 11052952 Murru_0145 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786623.1 150351 R 886377 CDS YP_004786624.1 344201481 11052953 150974..151456 1 NC_015945.1 COGs: COG3296 conserved hypothetical protein; KEGG: fbc:FB2170_14368 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 151456 11052953 Murru_0146 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786624.1 150974 D 886377 CDS YP_004786625.1 344201482 11052954 151456..152256 1 NC_015945.1 PFAM: Domain of unknown function (DUF3471); KEGG: cpi:Cpin_6175 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 152256 11052954 Murru_0147 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786625.1 151456 D 886377 CDS YP_004786626.1 344201483 11052955 152502..152831 1 NC_015945.1 PFAM: Transcriptional regulator PadR-like family; COGs: COG1695 transcriptional regulator protein; InterPro IPR005149; KEGG: fbc:FB2170_14378 putative PadR family transcriptional regulatory protein; PFAM: Transcription regulator PadR N-terminal-like; SPTR: Putative uncharacterized protein; PadR-like family transcriptional regulator 152831 11052955 Murru_0148 Muricauda ruestringensis DSM 13258 PadR-like family transcriptional regulator YP_004786626.1 152502 D 886377 CDS YP_004786627.1 344201484 11052956 152841..154568 1 NC_015945.1 PFAM: PspC domain; COGs: COG1983 Putative stress-responsive transcriptional regulator protein; InterPro IPR007168; KEGG: fbc:FB2170_14383 hypothetical protein; PFAM: Phage shock domain; SPTR: Putative uncharacterized protein; phage shock protein PspC 154568 11052956 Murru_0149 Muricauda ruestringensis DSM 13258 phage shock protein PspC YP_004786627.1 152841 D 886377 CDS YP_004786628.1 344201485 11052957 154607..155209 1 NC_015945.1 PFAM: Protein of unknown function (DUF2807); KEGG: phe:Phep_1934 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 155209 11052957 Murru_0150 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786628.1 154607 D 886377 CDS YP_004786629.1 344201486 11052958 155416..156138 1 NC_015945.1 PFAM: Protein of unknown function (DUF2807); KEGG: rbi:RB2501_00761 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 156138 11052958 Murru_0151 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786629.1 155416 D 886377 CDS YP_004786630.1 344201487 11052959 156164..156388 1 NC_015945.1 hypothetical protein 156388 11052959 Murru_0152 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786630.1 156164 D 886377 CDS YP_004786631.1 344201488 11052960 156429..157439 1 NC_015945.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013342; KEGG: fbc:FB2170_14398 chloromuconate cycloisomerase YkfB1; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: Chloromuconate cycloisomerase YkfB1; mandelate racemase/muconate lactonizing protein 157439 11052960 Murru_0153 Muricauda ruestringensis DSM 13258 mandelate racemase/muconate lactonizing protein YP_004786631.1 156429 D 886377 CDS YP_004786632.1 344201489 11052961 157439..158500 1 NC_015945.1 COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839; KEGG: fbc:FB2170_14403 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/classII; SPTR: 8-amino-7-oxononanoate synthase; class I and II aminotransferase 158500 11052961 Murru_0154 Muricauda ruestringensis DSM 13258 class I and II aminotransferase YP_004786632.1 157439 D 886377 CDS YP_004786633.1 344201490 11052962 158545..159747 1 NC_015945.1 PFAM: NlpC/P60 family; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: gfo:GFO_3330 NlpC/P60 family protein; PFAM: NLP/P60; SPTR: NlpC/P60 family protein; NLP/P60 protein 159747 11052962 Murru_0155 Muricauda ruestringensis DSM 13258 NLP/P60 protein YP_004786633.1 158545 D 886377 CDS YP_004786634.1 344201491 11052963 complement(159822..161213) 1 NC_015945.1 KEGG: zpr:ZPR_3797 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 161213 11052963 Murru_0156 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786634.1 159822 R 886377 CDS YP_004786635.1 344201492 11052964 complement(161225..164392) 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: zpr:ZPR_3798 putative outer membrane protein, probably involved in nutrient binding; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein, probably involved in nutrient binding; TonB-dependent receptor plug 164392 11052964 Murru_0157 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004786635.1 161225 R 886377 CDS YP_004786636.1 344201493 11052965 164687..165130 1 NC_015945.1 KEGG: fbc:FB2170_14408 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 165130 11052965 Murru_0158 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786636.1 164687 D 886377 CDS YP_004786637.1 344201494 11052966 complement(165301..166269) 1 NC_015945.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; COGs: COG0492 Thioredoxin reductase; InterPro IPR005982:IPR013027; KEGG: fbc:FB2170_14413 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Thioredoxin-disulfide reductase; SPTR: Thioredoxin reductase; TIGRFAM: Thioredoxin reductase; thioredoxin reductase 166269 11052966 Murru_0159 Muricauda ruestringensis DSM 13258 thioredoxin reductase YP_004786637.1 165301 R 886377 CDS YP_004786638.1 344201495 11052967 complement(166819..168189) 1 NC_015945.1 PFAM: RimK-like ATP-grasp domain; Protein of unknown function (DUF785); TIGRFAM: alpha-L-glutamate ligases, RimK family; COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR004666:IPR008503:IPR013651; KEGG: rbi:RB2501_05245 putative ribosomal protein S6 modification protein; PFAM: ATP-grasp fold, RimK-type; Protein of unknown function DUF785; SPTR: Alpha-L-glutamate ligase, RimK family; TIGRFAM: S6 modification enzyme RimK; RimK family alpha-L-glutamate ligase 168189 11052967 Murru_0160 Muricauda ruestringensis DSM 13258 RimK family alpha-L-glutamate ligase YP_004786638.1 166819 R 886377 CDS YP_004786639.1 344201496 11052968 complement(168203..168988) 1 NC_015945.1 PFAM: Uncharacterised ACR, YagE family COG1723; COGs: COG1723 conserved hypothetical protein; InterPro IPR003734; KEGG: cat:CA2559_00505 hypothetical protein; PFAM: Protein of unknown function DUF155; SPTR: Putative uncharacterized protein; hypothetical protein 168988 11052968 Murru_0161 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786639.1 168203 R 886377 CDS YP_004786640.1 344201497 11052969 complement(169172..169480) 1 NC_015945.1 KEGG: gfo:GFO_1491 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 169480 11052969 Murru_0162 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786640.1 169172 R 886377 CDS YP_004786641.1 344201498 11052970 complement(169483..170457) 1 NC_015945.1 PFAM: Deoxyhypusine synthase; TIGRFAM: deoxyhypusine synthase; COGs: COG1899 Deoxyhypusine synthase; InterPro IPR002773; KEGG: cat:CA2559_00515 hypothetical protein; PFAM: Deoxyhypusine synthase; SPTR: Deoxyhypusine synthase; deoxyhypusine synthase 170457 11052970 Murru_0163 Muricauda ruestringensis DSM 13258 deoxyhypusine synthase YP_004786641.1 169483 R 886377 CDS YP_004786642.1 344201499 11052971 complement(170511..171383) 1 NC_015945.1 PFAM: Arginase family; TIGRFAM: agmatinase; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR005925:IPR006035; KEGG: cat:CA2559_00520 arginase; PFAM: Ureohydrolase; PRIAM: Agmatinase; SPTR: Arginase; TIGRFAM: Putative agmatinase; agmatinase 171383 11052971 Murru_0164 Muricauda ruestringensis DSM 13258 agmatinase YP_004786642.1 170511 R 886377 CDS YP_004786643.1 344201500 11052972 complement(171564..173018) 1 NC_015945.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR022644:IPR022643; KEGG: cat:CA2559_00525 putative arginine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal; Orn/DAP/Arg decarboxylase 2, C-terminal; SPTR: Putative arginine decarboxylase; Orn/DAP/Arg decarboxylase 2, N-terminal 173018 11052972 Murru_0165 Muricauda ruestringensis DSM 13258 Orn/DAP/Arg decarboxylase 2, N-terminal YP_004786643.1 171564 R 886377 CDS YP_004786644.1 344201501 11052973 complement(173482..175686) 1 NC_015945.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR006311:IPR008274; KEGG: rbi:RB2501_02795 isoquinoline 1-oxidoreductase subunit beta; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; PRIAM: Isoquinoline 1-oxidoreductase; SPTR: Isoquinoline 1-oxidoreductase, beta subunit; Isoquinoline 1-oxidoreductase 175686 11052973 Murru_0166 Muricauda ruestringensis DSM 13258 Isoquinoline 1-oxidoreductase YP_004786644.1 173482 R 886377 CDS YP_004786645.1 344201502 11052974 complement(175704..176159) 1 NC_015945.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR001041:IPR002888; KEGG: rbi:RB2501_01016 isoquinoline 1-oxidoreductase subunit alpha; PFAM: [2Fe-2S]-binding; Ferredoxin; PRIAM: Isoquinoline 1-oxidoreductase; SPTR: Isoquinoline 1-oxidoreductase, alpha subunit; Isoquinoline 1-oxidoreductase 176159 11052974 Murru_0167 Muricauda ruestringensis DSM 13258 Isoquinoline 1-oxidoreductase YP_004786645.1 175704 R 886377 CDS YP_004786646.1 344201503 11052975 complement(176353..177183) 1 NC_015945.1 PFAM: Endonuclease/Exonuclease/phosphatase family; COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: zpr:ZPR_3540 endonuclease/exonuclease/phosphatase family protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase family protein; endonuclease/exonuclease/phosphatase 177183 11052975 Murru_0168 Muricauda ruestringensis DSM 13258 endonuclease/exonuclease/phosphatase YP_004786646.1 176353 R 886377 CDS YP_004786647.1 344201504 11052976 177603..178598 1 NC_015945.1 KEGG: mtt:Ftrac_3621 hypothetical protein; SPTR: Putative outer membrane insertion C-signal; hypothetical protein 178598 11052976 Murru_0169 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786647.1 177603 D 886377 CDS YP_004786648.1 344201505 11052977 178588..180129 1 NC_015945.1 PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: mtt:Ftrac_3622 phosphoesterase pa-phosphatase related protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: Vanadium chloroperoxidase-related protein; phosphoesterase PA-phosphatase-like protein 180129 11052977 Murru_0170 Muricauda ruestringensis DSM 13258 phosphoesterase PA-phosphatase-like protein YP_004786648.1 178588 D 886377 CDS YP_004786649.1 344201506 11052978 complement(180130..180741) 1 NC_015945.1 PFAM: 2OG-Fe(II) oxygenase superfamily; COGs: COG3145 Alkylated DNA repair protein; InterPro IPR005123; KEGG: fjo:Fjoh_1572 2OG-Fe(II) oxygenase; PFAM: Oxoglutarate/iron-dependent oxygenase; SPTR: DNA-N1-methyladenine dioxygenase; 2OG-Fe(II) oxygenase 180741 11052978 Murru_0171 Muricauda ruestringensis DSM 13258 2OG-Fe(II) oxygenase YP_004786649.1 180130 R 886377 CDS YP_004786650.1 344201507 11052979 complement(180710..180976) 1 NC_015945.1 PFAM: Metal binding domain of Ada; KEGG: fjo:Fjoh_1573 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 180976 11052979 Murru_0172 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786650.1 180710 R 886377 CDS YP_004786651.1 344201508 11052980 complement(180978..181691) 1 NC_015945.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2086); COGs: COG3826 conserved hypothetical protein; InterPro IPR006620:IPR018655; KEGG: fjo:Fjoh_1574 hypothetical protein; PFAM: Protein of unknown function DUF2086; SMART: Prolyl 4-hydroxylase, alpha subunit; SPTR: Uncharacterized protein; hypothetical protein 181691 11052980 Murru_0173 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786651.1 180978 R 886377 CDS YP_004786652.1 344201509 11052981 complement(181728..182576) 1 NC_015945.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; TIGRFAM: O-6-methylguanine DNA methyltransferase; COGs: COG0350 Methylated DNA-protein cysteine methyltransferase; InterPro IPR018060:IPR014048:IPR000005; KEGG: fjo:Fjoh_1575 methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: DNA-O6-methylguanine--protein-cysteine S-methyltransferase / Transcriptional regulator Ada; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; AraC family transcriptional regulator 182576 11052981 Murru_0174 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004786652.1 181728 R 886377 CDS YP_004786653.1 344201510 11052982 complement(182656..183684) 1 NC_015945.1 PFAM: HTH domain; COGs: COG2378 transcriptional regulator protein; InterPro IPR001034:IPR013196; KEGG: fjo:Fjoh_0788 helix-turn-helix, type 11 domain-containing protein; SMART: HTH transcriptional regulator, DeoR N-terminal; SPTR: Transcriptional regulator, DeoR family protein; regulatory protein DeoR 183684 11052982 Murru_0175 Muricauda ruestringensis DSM 13258 regulatory protein DeoR YP_004786653.1 182656 R 886377 CDS YP_004786654.1 344201511 11052983 183854..184348 1 NC_015945.1 PFAM: DinB family; COGs: COG2318 conserved hypothetical protein; InterPro IPR007837; KEGG: fjo:Fjoh_0790 DinB family protein; PFAM: DinB; SPTR: Putative uncharacterized protein; DinB family protein 184348 11052983 Murru_0176 Muricauda ruestringensis DSM 13258 DinB family protein YP_004786654.1 183854 D 886377 CDS YP_004786655.1 344201512 11052984 184361..184579 1 NC_015945.1 KEGG: fjo:Fjoh_2550 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 184579 11052984 Murru_0177 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786655.1 184361 D 886377 CDS YP_004786656.1 344201513 11052985 complement(184694..187708) 1 NC_015945.1 PFAM: BNR/Asp-box repeat; KEGG: sus:Acid_5900 hypothetical protein; SPTR: Glycosyl hydrolase, BNR repeat-containing protein; hypothetical protein 187708 11052985 Murru_0178 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786656.1 184694 R 886377 CDS YP_004786657.1 344201514 11052986 187962..188399 1 NC_015945.1 KEGG: gfo:GFO_0612 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 188399 11052986 Murru_0179 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786657.1 187962 D 886377 CDS YP_004786658.1 344201515 11052987 complement(189403..190383) 1 NC_015945.1 PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR018060:IPR002818:IPR000005; KEGG: chu:CHU_3787 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; ThiJ/PfpI; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family with amidase-like domain; AraC family transcriptional regulator 190383 11052987 Murru_0180 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004786658.1 189403 R 886377 CDS YP_004786659.1 344201516 11052988 190536..191069 1 NC_015945.1 PFAM: RibD C-terminal domain; COGs: COG0262 Dihydrofolate reductase; InterPro IPR002734; KEGG: lic:LIC10659 hypothetical protein; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; SPTR: Putative uncharacterized protein; bifunctional deaminase-reductase domain-containing protein 191069 11052988 Murru_0181 Muricauda ruestringensis DSM 13258 bifunctional deaminase-reductase domain-containing protein YP_004786659.1 190536 D 886377 CDS YP_004786660.1 344201517 11052989 191071..191580 1 NC_015945.1 KEGG: phe:Phep_1306 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 191580 11052989 Murru_0182 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786660.1 191071 D 886377 CDS YP_004786661.1 344201518 11052990 191570..191986 1 NC_015945.1 COGs: COG3607 lactoylglutathione lyase; InterPro IPR004360; KEGG: cpi:Cpin_6132 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase; bleomycin resistance protein 191986 11052990 Murru_0183 Muricauda ruestringensis DSM 13258 bleomycin resistance protein YP_004786661.1 191570 D 886377 CDS YP_004786662.1 344201519 11052991 192031..192441 1 NC_015945.1 COGs: COG3607 lactoylglutathione lyase; KEGG: bbe:BBR47_14640 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 192441 11052991 Murru_0184 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786662.1 192031 D 886377 CDS YP_004786663.1 344201520 11052992 192575..192997 1 NC_015945.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; COGs: COG2764 conserved hypothetical protein; InterPro IPR004360; KEGG: dfe:Dfer_5411 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Putative uncharacterized protein; bleomycin resistance protein 192997 11052992 Murru_0185 Muricauda ruestringensis DSM 13258 bleomycin resistance protein YP_004786663.1 192575 D 886377 CDS YP_004786664.1 344201521 11052993 193026..193328 1 NC_015945.1 KEGG: cpi:Cpin_5777 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 193328 11052993 Murru_0186 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786664.1 193026 D 886377 CDS YP_004786665.1 344201522 11052994 193360..193770 1 NC_015945.1 KEGG: chl:Chy400_2639 hypothetical protein; SPTR: Putative DNA-binding protein; hypothetical protein 193770 11052994 Murru_0187 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786665.1 193360 D 886377 CDS YP_004786666.1 344201523 11052995 complement(194126..194992) 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR014284:IPR009042:IPR007627:IPR007624:IPR 007630; KEGG: rbi:RB2501_15004 putative sigma factor A; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4; SPTR: Putative sigma factor A; TIGRFAM: RNA polymerase sigma-70; RpoD subfamily RNA polymerase sigma-70 subunit 194992 11052995 Murru_0188 Muricauda ruestringensis DSM 13258 RpoD subfamily RNA polymerase sigma-70 subunit YP_004786666.1 194126 R 886377 CDS YP_004786667.1 344201524 11052996 complement(195008..195742) 1 NC_015945.1 PFAM: Protein of unknown function DUF88; InterPro IPR021139; KEGG: mtt:Ftrac_2290 hypothetical protein; PFAM: Domain of unknown function DUF88; SPTR: Protein containing DUF88; hypothetical protein 195742 11052996 Murru_0189 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786667.1 195008 R 886377 CDS YP_004786668.1 344201525 11052997 complement(195751..195945) 1 NC_015945.1 PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; KEGG: coc:Coch_0829 30S ribosomal protein S21; SPTR: 30S ribosomal protein S21; 30S ribosomal protein S21 195945 11052997 Murru_0190 Muricauda ruestringensis DSM 13258 30S ribosomal protein S21 YP_004786668.1 195751 R 886377 CDS YP_004786669.1 344201526 11052998 complement(196703..197956) 1 NC_015945.1 KEGG: fbc:FB2170_15283 putative outer membrane protein; SPTR: Putative outer membrane protein; putative outer membrane protein 197956 11052998 Murru_0191 Muricauda ruestringensis DSM 13258 putative outer membrane protein YP_004786669.1 196703 R 886377 CDS YP_004786670.1 344201527 11052999 complement(197937..199268) 1 NC_015945.1 KEGG: fbc:FB2170_15278 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 199268 11052999 Murru_0192 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786670.1 197937 R 886377 CDS YP_004786671.1 344201528 11053000 199526..200377 1 NC_015945.1 KEGG: fjo:Fjoh_1684 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 200377 11053000 Murru_0193 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786671.1 199526 D 886377 CDS YP_004786672.1 344201529 11053001 200403..201398 1 NC_015945.1 InterPro IPR006652; KEGG: fbc:FB2170_15273 hypothetical protein; PFAM: Kelch repeat type 1; SPTR: Putative uncharacterized protein; Kelch repeat type 1-containing protein 201398 11053001 Murru_0194 Muricauda ruestringensis DSM 13258 Kelch repeat type 1-containing protein YP_004786672.1 200403 D 886377 CDS YP_004786673.1 344201530 11053002 201438..201764 1 NC_015945.1 KEGG: fjo:Fjoh_1682 hypothetical protein; SPTR: Hypothetical lipoprotein; hypothetical protein 201764 11053002 Murru_0195 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786673.1 201438 D 886377 CDS YP_004786674.1 344201531 11053003 201761..202789 1 NC_015945.1 PFAM: Histidine kinase; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: fjo:Fjoh_1681 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Signal transduction histidine kinase, LytS; putative signal transduction histidine kinase 202789 11053003 Murru_0196 Muricauda ruestringensis DSM 13258 putative signal transduction histidine kinase YP_004786674.1 201761 D 886377 CDS YP_004786675.1 344201532 11053004 202791..203528 1 NC_015945.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: fbc:FB2170_15253 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SMART: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SPTR: Two-component system response regulator; LytTR family two component transcriptional regulator 203528 11053004 Murru_0197 Muricauda ruestringensis DSM 13258 LytTR family two component transcriptional regulator YP_004786675.1 202791 D 886377 CDS YP_004786676.1 344201533 11053005 203629..204252 1 NC_015945.1 PFAM: Bacterial regulatory proteins, tetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: cpi:Cpin_2914 transcriptional regulator, TetR family; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; TetR family transcriptional regulator 204252 11053005 Murru_0198 Muricauda ruestringensis DSM 13258 TetR family transcriptional regulator YP_004786676.1 203629 D 886377 CDS YP_004786677.1 344201534 11053006 204249..205589 1 NC_015945.1 PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; KEGG: ppn:Palpr_2718 outer membrane efflux protein; SPTR: Outer membrane efflux protein; outer membrane efflux protein 205589 11053006 Murru_0199 Muricauda ruestringensis DSM 13258 outer membrane efflux protein YP_004786677.1 204249 D 886377 CDS YP_004786678.1 344201535 11053007 205570..206490 1 NC_015945.1 PFAM: HlyD family secretion protein; COGs: COG1566 Multidrug resistance efflux pump; KEGG: cts:Ctha_1317 putative ABC transport system, lipoprotein; SPTR: Putative ABC transport system, lipoprotein; putative ABC transport system, lipoprotein 206490 11053007 Murru_0200 Muricauda ruestringensis DSM 13258 putative ABC transport system, lipoprotein YP_004786678.1 205570 D 886377 CDS YP_004786679.1 344201536 11053008 206514..207383 1 NC_015945.1 KEGG: fba:FIC_01675 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 207383 11053008 Murru_0201 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786679.1 206514 D 886377 CDS YP_004786680.1 344201537 11053009 207427..208332 1 NC_015945.1 PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: coc:Coch_0115 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; sulfate-transporting ATPase 208332 11053009 Murru_0202 Muricauda ruestringensis DSM 13258 sulfate-transporting ATPase YP_004786680.1 207427 D 886377 CDS YP_004786681.1 344201538 11053010 208329..209057 1 NC_015945.1 PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: dfe:Dfer_5639 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; sulfate-transporting ATPase 209057 11053010 Murru_0203 Muricauda ruestringensis DSM 13258 sulfate-transporting ATPase YP_004786681.1 208329 D 886377 CDS YP_004786682.1 344201539 11053011 209070..210176 1 NC_015945.1 PFAM: ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525; KEGG: cts:Ctha_1313 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; ABC transporter 210176 11053011 Murru_0204 Muricauda ruestringensis DSM 13258 ABC transporter YP_004786682.1 209070 D 886377 CDS YP_004786683.1 344201540 11053012 210178..211299 1 NC_015945.1 PFAM: ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525; KEGG: cts:Ctha_1312 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2; ABC transporter 211299 11053012 Murru_0205 Muricauda ruestringensis DSM 13258 ABC transporter YP_004786683.1 210178 D 886377 CDS YP_004786684.1 344201541 11053013 211299..212066 1 NC_015945.1 PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein; COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: chu:CHU_3379 hypothetical protein; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; SPTR: Putative uncharacterized protein; TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; hypothetical protein 212066 11053013 Murru_0206 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786684.1 211299 D 886377 CDS YP_004786685.1 344201542 11053014 212012..212455 1 NC_015945.1 KEGG: fba:FIC_01674 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 212455 11053014 Murru_0207 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786685.1 212012 D 886377 CDS YP_004786686.1 344201543 11053015 212452..212904 1 NC_015945.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2141); COGs: COG4704 conserved hypothetical protein; InterPro IPR018673; KEGG: mtt:Ftrac_2693 hypothetical protein; PFAM: Protein of unknown function DUF2141; SPTR: Putative uncharacterized protein; hypothetical protein 212904 11053015 Murru_0208 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786686.1 212452 D 886377 CDS YP_004786687.1 344201544 11053016 212905..213798 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 213798 11053016 Murru_0209 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786687.1 212905 D 886377 CDS YP_004786688.1 344201545 11053017 213809..214651 1 NC_015945.1 PFAM: ATP cone domain; Restriction endonuclease; InterPro IPR007560; KEGG: zpr:ZPR_3407 putative nuclease; PFAM: Restriction endonuclease, type IV-like, Mrr; SPTR: Putative uncharacterized protein; restriction endonuclease 214651 11053017 Murru_0210 Muricauda ruestringensis DSM 13258 restriction endonuclease YP_004786688.1 213809 D 886377 CDS YP_004786689.1 344201546 11053018 214659..215261 1 NC_015945.1 KEGG: cpi:Cpin_1413 metal dependent phosphohydrolase; SPTR: Metal dependent phosphohydrolase; metal dependent phosphohydrolase 215261 11053018 Murru_0211 Muricauda ruestringensis DSM 13258 metal dependent phosphohydrolase YP_004786689.1 214659 D 886377 CDS YP_004786690.1 344201547 11053019 complement(215336..217189) 1 NC_015945.1 PFAM: Sulfate transporter family; STAS domain; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547:IPR002645; KEGG: fbc:FB2170_06670 sulfate transporter/antisigma-factor antagonist; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Sulfate transporter/antisigma-factor antagonist STAS; sulfate transporter 217189 11053019 Murru_0212 Muricauda ruestringensis DSM 13258 sulfate transporter YP_004786690.1 215336 R 886377 CDS YP_004786691.1 344201548 11053020 complement(217437..217838) 1 NC_015945.1 KEGG: rbi:RB2501_10807 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 217838 11053020 Murru_0213 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786691.1 217437 R 886377 CDS YP_004786692.1 344201549 11053021 complement(217835..218254) 1 NC_015945.1 PFAM: Transcription elongation factor, GreA/GreB, C-term; COGs: COG0782 Transcription elongation factor; InterPro IPR001437; KEGG: rbi:RB2501_10812 nucleoside diphosphate kinase regulator; PFAM: Transcription elongation factor, GreA/GreB, C-terminal; SPTR: Transcription elongation factor; GreA/GreB family elongation factor 218254 11053021 Murru_0214 Muricauda ruestringensis DSM 13258 GreA/GreB family elongation factor YP_004786692.1 217835 R 886377 CDS YP_004786693.1 344201550 11053022 complement(218326..219618) 1 NC_015945.1 PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006096:IPR006097; KEGG: rbi:RB2501_10817 glutamate dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; PRIAM: Glutamate dehydrogenase (NAD(P)(+)); SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; SPTR: Glutamate dehydrogenase; glutamate dehydrogenase (NAD(P)(+)) 219618 11053022 Murru_0215 Muricauda ruestringensis DSM 13258 glutamate dehydrogenase (NAD(P)(+)) YP_004786693.1 218326 R 886377 CDS YP_004786694.1 344201551 11053023 complement(219661..219819) 1 NC_015945.1 hypothetical protein 219819 11053023 Murru_0216 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786694.1 219661 R 886377 CDS YP_004786695.1 344201552 11053024 complement(219853..220065) 1 NC_015945.1 hypothetical protein 220065 11053024 Murru_0217 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786695.1 219853 R 886377 CDS YP_004786696.1 344201553 11053025 complement(220284..221612) 1 NC_015945.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078:IPR002197; KEGG: rbi:RB2501_10832 two component, sigma54 specific, transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family protein; two component sigma-54 specific Fis family transcriptional regulator 221612 11053025 Murru_0218 Muricauda ruestringensis DSM 13258 two component sigma-54 specific Fis family transcriptional regulator YP_004786696.1 220284 R 886377 CDS YP_004786697.1 344201554 11053026 complement(221618..222736) 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: rbi:RB2501_10837 sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Sensor histidine kinase; histidine kinase 222736 11053026 Murru_0219 Muricauda ruestringensis DSM 13258 histidine kinase YP_004786697.1 221618 R 886377 CDS YP_004786698.1 344201555 11053027 223446..225158 1 NC_015945.1 KEGG: bpl:BURPS1106A_3673 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 225158 11053027 Murru_0220 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786698.1 223446 D 886377 CDS YP_004786699.1 344201556 11053028 225235..226122 1 NC_015945.1 PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); InterPro IPR007409; KEGG: sbm:Shew185_2567 hypothetical protein; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; SPTR: Putative uncharacterized protein; Restriction endonuclease, type I, EcoRI, R subunit/Type III 226122 11053028 Murru_0221 Muricauda ruestringensis DSM 13258 Restriction endonuclease, type I, EcoRI, R subunit/Type III YP_004786699.1 225235 D 886377 CDS YP_004786700.1 344201557 11053029 226383..226601 1 NC_015945.1 PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: pdi:BDI_2133 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; helix-turn-helix domain-containing protein 226601 11053029 Murru_0222 Muricauda ruestringensis DSM 13258 helix-turn-helix domain-containing protein YP_004786700.1 226383 D 886377 CDS YP_004786701.1 344201558 11053030 226594..227829 1 NC_015945.1 PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm); COGs: COG0270 Site-specific DNA methylase; InterPro IPR001525; KEGG: bth:BT_4754 putative cytosine-specific methyltransferase; PFAM: C-5 cytosine methyltransferase; SPTR: Cytosine-specific methyltransferase; TIGRFAM: C-5 cytosine methyltransferase; DNA-cytosine methyltransferase 227829 11053030 Murru_0223 Muricauda ruestringensis DSM 13258 DNA-cytosine methyltransferase YP_004786701.1 226594 D 886377 CDS YP_004786702.1 344201559 11053031 227832..230201 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594; KEGG: pap:PSPA7_2516 putative prophage encoded two-component system histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Two-component system sensor histidine kinase; histidine kinase 230201 11053031 Murru_0224 Muricauda ruestringensis DSM 13258 histidine kinase YP_004786702.1 227832 D 886377 CDS YP_004786703.1 344201560 11053032 230198..231109 1 NC_015945.1 KEGG: yen:YE1683 putative prophage encoded two-component system response regulator; SPTR: Putative uncharacterized protein; hypothetical protein 231109 11053032 Murru_0225 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786703.1 230198 D 886377 CDS YP_004786704.1 344201561 11053033 complement(231363..232460) 1 NC_015945.1 KEGG: zpr:ZPR_4419 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 232460 11053033 Murru_0226 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786704.1 231363 R 886377 CDS YP_004786705.1 344201562 11053034 complement(232462..233256) 1 NC_015945.1 PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; InterPro IPR014284:IPR007627; KEGG: zpr:ZPR_4420 RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; sigma-70 family RNA polymerase sigma factor 233256 11053034 Murru_0227 Muricauda ruestringensis DSM 13258 sigma-70 family RNA polymerase sigma factor YP_004786705.1 232462 R 886377 CDS YP_004786706.1 344201563 11053035 233452..233841 1 NC_015945.1 PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: zpr:ZPR_1314 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; helix-turn-helix domain-containing protein 233841 11053035 Murru_0228 Muricauda ruestringensis DSM 13258 helix-turn-helix domain-containing protein YP_004786706.1 233452 D 886377 CDS YP_004786707.1 344201564 11053036 234069..235301 1 NC_015945.1 KEGG: cbk:CLL_A1928 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 235301 11053036 Murru_0229 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786707.1 234069 D 886377 CDS YP_004786708.1 344201565 11053037 complement(235479..236501) 1 NC_015945.1 KEGG: gfo:GFO_1355 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 236501 11053037 Murru_0230 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786708.1 235479 R 886377 CDS YP_004786709.1 344201566 11053038 complement(236507..237091) 1 NC_015945.1 KEGG: zpr:ZPR_4414 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 237091 11053038 Murru_0231 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786709.1 236507 R 886377 CDS YP_004786710.1 344201567 11053039 complement(237355..238593) 1 NC_015945.1 PFAM: Phage integrase family; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: zpr:ZPR_1513 putative transposase; PFAM: Integrase, catalytic core, phage; SPTR: Putative transposase; integrase family protein 238593 11053039 Murru_0232 Muricauda ruestringensis DSM 13258 integrase family protein YP_004786710.1 237355 R 886377 CDS YP_004786711.1 344201568 11053041 239061..240179 1 NC_015945.1 PFAM: Glucose / Sorbosone dehydrogenase; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR012938; KEGG: fbc:FB2170_09801 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 240179 11053041 Murru_0233 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786711.1 239061 D 886377 CDS YP_004786712.1 344201569 11053042 complement(240192..241007) 1 NC_015945.1 PFAM: SIS domain; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase; COGs: COG2103 sugar phosphate isomerase; HAMAP: N-acetylmuramic acid 6-phosphate etherase; InterPro IPR005488:IPR001347; KEGG: fbc:FB2170_09791 hypothetical protein; PFAM: Sugar isomerase (SIS); SPTR: Putative uncharacterized protein; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase; N-acetylmuramic acid 6-phosphate etherase 241007 11053042 Murru_0234 Muricauda ruestringensis DSM 13258 N-acetylmuramic acid 6-phosphate etherase YP_004786712.1 240192 R 886377 CDS YP_004786713.1 344201570 11053043 complement(241012..241761) 1 NC_015945.1 PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR014036; KEGG: fbc:FB2170_09786 DeoR family transcriptional regulator; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal; SPTR: Transcriptional regulator, DeoR family protein; DeoR family transcriptional regulator 241761 11053043 Murru_0235 Muricauda ruestringensis DSM 13258 DeoR family transcriptional regulator YP_004786713.1 241012 R 886377 CDS YP_004786714.1 344201571 11053044 241934..243871 1 NC_015945.1 PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; GlcNAc-PI de-N-acetylase; TIGRFAM: glucosamine-6-phosphate isomerase; COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; InterPro IPR004547:IPR006148:IPR003737; KEGG: rbi:RB2501_01555 glucosamine-6-phosphate deaminase-like protein; PFAM: Glucosamine/galactosamine-6-phosphate isomerase; N-acetylglucosaminyl phosphatidylinositol deacetylase; PRIAM: Glucosamine-6-phosphate deaminase; SPTR: Glucosamine-6-phosphate deaminase; TIGRFAM: Glucosamine-6-phosphate isomerase; glucosamine-6-phosphate isomerase 243871 11053044 Murru_0236 Muricauda ruestringensis DSM 13258 glucosamine-6-phosphate isomerase YP_004786714.1 241934 D 886377 CDS YP_004786715.1 344201572 11053045 244083..245363 1 NC_015945.1 PFAM: Major Facilitator Superfamily; KEGG: rbi:RB2501_01560 putative transmembrane permease; SPTR: Putative transmembrane permease; putative transmembrane permease 245363 11053045 Murru_0237 Muricauda ruestringensis DSM 13258 putative transmembrane permease YP_004786715.1 244083 D 886377 CDS YP_004786716.1 344201573 11053046 245356..246942 1 NC_015945.1 PFAM: Glycosyl hydrolase family 3 N terminal domain; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764; KEGG: fbc:FB2170_09766 glycosyl hydrolase, family 3; PFAM: Glycoside hydrolase, family 3, N-terminal; PRIAM: Beta-N-acetylhexosaminidase; SPTR: Glycosyl hydrolase, family 3; beta-N-acetylhexosaminidase 246942 11053046 Murru_0238 Muricauda ruestringensis DSM 13258 beta-N-acetylhexosaminidase YP_004786716.1 245356 D 886377 CDS YP_004786717.1 344201574 11053047 246939..247604 1 NC_015945.1 PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: cyj:Cyan7822_5970 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase domain family; type 11 methyltransferase 247604 11053047 Murru_0239 Muricauda ruestringensis DSM 13258 type 11 methyltransferase YP_004786717.1 246939 D 886377 CDS YP_004786718.1 344201575 11053048 247601..248689 1 NC_015945.1 PFAM: Uncharacterised protein family (UPF0075); COGs: COG2377 molecular chaperone distantly related to HSP70-fold metalloprotease; InterPro IPR005338; KEGG: fbc:FB2170_09751 hypothetical protein; PFAM: Anhydro-N-acetylmuramic acid kinase; SPTR: Putative uncharacterized protein; hypothetical protein 248689 11053048 Murru_0240 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786718.1 247601 D 886377 CDS YP_004786719.1 344201576 11053049 complement(248686..249900) 1 NC_015945.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein; COGs: COG2814 Arabinose efflux permease; InterPro IPR004812:IPR011701; KEGG: fbc:FB2170_09721 bicyclomycin resistance protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Bicyclomycin resistance protein; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter 249900 11053049 Murru_0241 Muricauda ruestringensis DSM 13258 Bcr/CflA subfamily drug resistance transporter YP_004786719.1 248686 R 886377 CDS YP_004786720.1 344201577 11053050 250076..251137 1 NC_015945.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: fbc:FB2170_06050 putative myo-inositol 2-dehydrogenase; PFAM: Oxidoreductase, N-terminal; SPTR: Probable Myo-inositol 2-dehydrogenase; oxidoreductase domain-containing protein 251137 11053050 Murru_0242 Muricauda ruestringensis DSM 13258 oxidoreductase domain-containing protein YP_004786720.1 250076 D 886377 CDS YP_004786721.1 344201578 11053051 complement(251450..252991) 1 NC_015945.1 PFAM: Carboxyl transferase domain; COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR000022; KEGG: fbc:FB2170_09716 putative propionyl-CoA carboxylase beta chain protein; PFAM: Carboxyl transferase; PRIAM: Propionyl-CoA carboxylase; SPTR: Putative propionyl-CoA carboxylase beta chain protein; propionyl-CoA carboxylase 252991 11053051 Murru_0243 Muricauda ruestringensis DSM 13258 propionyl-CoA carboxylase YP_004786721.1 251450 R 886377 CDS YP_004786722.1 344201579 11053052 complement(252997..254439) 1 NC_015945.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR005482:IPR005481:IPR005479; KEGG: fbc:FB2170_09711 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; PRIAM: Pyruvate carboxylase; SMART: Biotin carboxylase, C-terminal; SPTR: Acetyl-CoA carboxylase, biotin carboxylase; pyruvate carboxylase 254439 11053052 Murru_0244 Muricauda ruestringensis DSM 13258 pyruvate carboxylase YP_004786722.1 252997 R 886377 CDS YP_004786723.1 344201580 11053053 complement(254446..254946) 1 NC_015945.1 PFAM: Biotin-requiring enzyme; COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR000089; KEGG: fbc:FB2170_09706 pyruvate carboxylase; PFAM: Biotin/lipoyl attachment; SPTR: Biotin carboxyl carrier protein of acyl-CoA carboxylase; biotin/lipoyl attachment domain-containing protein 254946 11053053 Murru_0245 Muricauda ruestringensis DSM 13258 biotin/lipoyl attachment domain-containing protein YP_004786723.1 254446 R 886377 CDS YP_004786724.1 344201581 11053054 255183..255791 1 NC_015945.1 PFAM: Phosphoribulokinase / Uridine kinase family; TIGRFAM: uridine kinase; COGs: COG0572 Uridine kinase; InterPro IPR000764:IPR006083; KEGG: fbc:FB2170_09646 uridine kinase; PFAM: Phosphoribulokinase/uridine kinase; PRIAM: Uridine kinase; SPTR: Uridine kinase; TIGRFAM: Uridine kinase; uridine kinase 255791 11053054 Murru_0246 Muricauda ruestringensis DSM 13258 uridine kinase YP_004786724.1 255183 D 886377 CDS YP_004786725.1 344201582 11053055 255793..256125 1 NC_015945.1 PFAM: Septum formation initiator; InterPro IPR007060; KEGG: fbc:FB2170_09641 uridine kinase; PFAM: Septum formation initiator; SPTR: Uridine kinase; septum formation initiator 256125 11053055 Murru_0247 Muricauda ruestringensis DSM 13258 septum formation initiator YP_004786725.1 255793 D 886377 CDS YP_004786726.1 344201583 11053056 256118..257503 1 NC_015945.1 PFAM: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006099; KEGG: fps:FP1121 methylmalonyl-CoA mutase small subunit; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; PRIAM: Methylmalonyl-CoA mutase; SPTR: Putative methylmalonyl-CoA mutase small subunit; methylmalonyl-CoA mutase 257503 11053056 Murru_0248 Muricauda ruestringensis DSM 13258 methylmalonyl-CoA mutase YP_004786726.1 256118 D 886377 CDS YP_004786727.1 344201584 11053057 257496..259604 1 NC_015945.1 PFAM: Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase C-terminal domain; COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006098:IPR006159:IPR006099:IPR006158; KEGG: gfo:GFO_0809 methylmalonyl-CoA mutase; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Cobalamin (vitamin B12)-binding; PRIAM: Methylmalonyl-CoA mutase; SPTR: Methylmalonyl-CoA mutase large subunit; TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; Methylmalonyl-CoA mutase, C-terminal; methylmalonyl-CoA mutase large subunit 259604 11053057 Murru_0249 Muricauda ruestringensis DSM 13258 methylmalonyl-CoA mutase large subunit YP_004786727.1 257496 D 886377 CDS YP_004786728.1 344201585 11053058 259739..260512 1 NC_015945.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: fbc:FB2170_09631 SpoOJ regulator protein; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: SpoOJ regulator protein; Cobyrinic acid ac-diamide synthase 260512 11053058 Murru_0250 Muricauda ruestringensis DSM 13258 Cobyrinic acid ac-diamide synthase YP_004786728.1 259739 D 886377 CDS YP_004786729.1 344201586 11053059 260513..261418 1 NC_015945.1 PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115:IPR004437; KEGG: fbc:FB2170_09626 putative chromosome partitioning protein ParB; PFAM: ParB-like nuclease; SMART: ParB-like nuclease; SPTR: Putative chromosome partitioning protein parB; TIGRFAM: ParB-like partition protein; parB-like partition protein 261418 11053059 Murru_0251 Muricauda ruestringensis DSM 13258 parB-like partition protein YP_004786729.1 260513 D 886377 CDS YP_004786730.1 344201587 11053060 261432..262067 1 NC_015945.1 KEGG: rbi:RB2501_01620 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 262067 11053060 Murru_0252 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786730.1 261432 D 886377 CDS YP_004786731.1 344201588 11053061 262071..262772 1 NC_015945.1 PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; COGs: COG0289 Dihydrodipicolinate reductase; HAMAP: Dihydrodipicolinate reductase, bacterial/plant; InterPro IPR011770:IPR000846:IPR022663; KEGG: fbc:FB2170_09616 dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase, C-terminal; Dihydrodipicolinate reductase, N-terminal; PRIAM: Dihydrodipicolinate reductase; SPTR: Dihydrodipicolinate reductase; TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; dihydrodipicolinate reductase 262772 11053061 Murru_0253 Muricauda ruestringensis DSM 13258 dihydrodipicolinate reductase YP_004786731.1 262071 D 886377 CDS YP_004786732.1 344201589 11053062 262823..264562 1 NC_015945.1 PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; InterPro IPR000223:IPR019759; KEGG: fbc:FB2170_09611 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; signal peptidase I 264562 11053062 Murru_0254 Muricauda ruestringensis DSM 13258 signal peptidase I YP_004786732.1 262823 D 886377 CDS YP_004786733.1 344201590 11053063 264585..265217 1 NC_015945.1 PFAM: WbqC-like protein family; InterPro IPR014985; KEGG: fbc:FB2170_09606 hypothetical protein; PFAM: WbqC-like protein family; SPTR: Putative uncharacterized protein; WbqC-like family protein 265217 11053063 Murru_0255 Muricauda ruestringensis DSM 13258 WbqC-like family protein YP_004786733.1 264585 D 886377 CDS YP_004786734.1 344201591 11053064 265210..265518 1 NC_015945.1 KEGG: fbc:FB2170_09601 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 265518 11053064 Murru_0256 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786734.1 265210 D 886377 CDS YP_004786735.1 344201592 11053065 complement(265507..266544) 1 NC_015945.1 PFAM: Endonuclease/Exonuclease/phosphatase family; COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: fbc:FB2170_09596 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Putative uncharacterized protein; endonuclease/exonuclease/phosphatase 266544 11053065 Murru_0257 Muricauda ruestringensis DSM 13258 endonuclease/exonuclease/phosphatase YP_004786735.1 265507 R 886377 CDS YP_004786736.1 344201593 11053066 complement(266551..267411) 1 NC_015945.1 PFAM: Rhomboid family; COGs: COG0705 membrane protein; InterPro IPR022764; KEGG: fbc:FB2170_09591 putative transmembrane rhomboid family protein; PFAM: Peptidase S54, rhomboid domain; SPTR: Putative transmembrane rhomboid family protein; peptidase S54, rhomboid domain-containing protein 267411 11053066 Murru_0258 Muricauda ruestringensis DSM 13258 peptidase S54, rhomboid domain-containing protein YP_004786736.1 266551 R 886377 CDS YP_004786737.1 344201594 11053067 complement(267415..268149) 1 NC_015945.1 PFAM: Rhomboid family; COGs: COG0705 membrane protein; InterPro IPR022764; KEGG: fbc:FB2170_09586 putative transmembrane rhomboid family protein; PFAM: Peptidase S54, rhomboid domain; SPTR: Putative transmembrane rhomboid family protein; peptidase S54, rhomboid domain-containing protein 268149 11053067 Murru_0259 Muricauda ruestringensis DSM 13258 peptidase S54, rhomboid domain-containing protein YP_004786737.1 267415 R 886377 CDS YP_004786738.1 344201595 11053068 complement(268150..269997) 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL; COGs: COG0323 DNA mismatch repair enzyme (predicted ATPase); HAMAP: DNA mismatch repair protein, MutL; InterProIPR014790:IPR014763:IPR020667:IPR003594:IPR 013507; KEGG: fbc:FB2170_09581 putative DNA mismatch repair protein; PFAM: DNA mismatch repair protein, C-terminal; ATPase-like, ATP-binding domain; MutL, C-terminal, dimerisation; SMART: MutL, C-terminal, dimerisation; SPTR: DNA mismatch repair protein mutL; TIGRFAM: DNA mismatch repair protein, N-terminal; DNA mismatch repair protein mutL 269997 11053068 Murru_0260 Muricauda ruestringensis DSM 13258 DNA mismatch repair protein mutL YP_004786738.1 268150 R 886377 CDS YP_004786739.1 344201596 11053069 complement(269997..270281) 1 NC_015945.1 KEGG: rbi:RB2501_01665 riboflavin synthase subunit beta; SPTR: Riboflavin synthase subunit beta; riboflavin synthase subunit beta 270281 11053069 Murru_0261 Muricauda ruestringensis DSM 13258 riboflavin synthase subunit beta YP_004786739.1 269997 R 886377 CDS YP_004786740.1 344201597 11053070 complement(270480..270962) 1 NC_015945.1 PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; COGs: COG0054 Riboflavin synthase beta-chain; HAMAP: 6,7-dimethyl-8-ribityllumazine synthase; InterPro IPR002180; KEGG: fbc:FB2170_09571 riboflavin synthase subunit beta; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; SPTR: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase 270962 11053070 Murru_0262 Muricauda ruestringensis DSM 13258 6,7-dimethyl-8-ribityllumazine synthase YP_004786740.1 270480 R 886377 CDS YP_004786741.1 344201598 11053071 complement(270966..271727) 1 NC_015945.1 PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440; KEGG: fbc:FB2170_09566 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: Putative uncharacterized protein; hypothetical protein 271727 11053071 Murru_0263 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786741.1 270966 R 886377 CDS YP_004786742.1 344201599 11053072 271855..272934 1 NC_015945.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein; COGs: COG1195 Recombinational DNA repair ATPase (RecF pathway); HAMAP: DNA-binding, RecF; InterPro IPR001238:IPR003395; KEGG: fbc:FB2170_09561 DNA replication and repair protein RecF; PFAM: RecF/RecN/SMC; SPTR: DNA replication and repair protein recF; TIGRFAM: DNA-binding, RecF; DNA replication and repair protein RecF 272934 11053072 Murru_0264 Muricauda ruestringensis DSM 13258 DNA replication and repair protein RecF YP_004786742.1 271855 D 886377 CDS YP_004786743.1 344201600 11053073 272939..273361 1 NC_015945.1 KEGG: fbc:FB2170_09556 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 273361 11053073 Murru_0265 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786743.1 272939 D 886377 CDS YP_004786744.1 344201601 11053074 273361..273657 1 NC_015945.1 PFAM: Protein of unknown function (DUF721); InterPro IPR007922; KEGG: fbc:FB2170_09551 hypothetical protein; PFAM: Protein of unknown function DUF721/UPF0232; SPTR: Putative uncharacterized protein; hypothetical protein 273657 11053074 Murru_0266 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786744.1 273361 D 886377 CDS YP_004786745.1 344201602 11053075 complement(273784..274203) 1 NC_015945.1 PFAM: Nucleoside diphosphate kinase; COGs: COG0105 Nucleoside diphosphate kinase; HAMAP: Nucleoside diphosphate kinase; InterPro IPR001564; KEGG: fbc:FB2170_09546 nucleoside-diphosphate kinase; PFAM: Nucleoside diphosphate kinase; PRIAM: Nucleoside-diphosphate kinase; SMART: Nucleoside diphosphate kinase; SPTR: Nucleoside diphosphate kinase; manually curated; nucleoside diphosphate kinase 274203 11053075 Murru_0267 Muricauda ruestringensis DSM 13258 nucleoside diphosphate kinase YP_004786745.1 273784 R 886377 CDS YP_004786746.1 344201603 11053076 complement(274253..275287) 1 NC_015945.1 PFAM: PhoD-like phosphatase; COGs: COG3540 Phosphodiesterase/alkaline phosphatase D; KEGG: gfo:GFO_0789 phosphodiesterase/alkaline phosphatase D-like protein; SPTR: Phosphodiesterase/alkaline phosphatase D-like protein; phosphodiesterase/alkaline phosphatase D-like protein 275287 11053076 Murru_0268 Muricauda ruestringensis DSM 13258 phosphodiesterase/alkaline phosphatase D-like protein YP_004786746.1 274253 R 886377 CDS YP_004786747.1 344201604 11053077 275362..276378 1 NC_015945.1 PFAM: DHH family; DHHA1 domain; COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667:IPR003156; KEGG: fbc:FB2170_09541 hypothetical protein; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR: Putative uncharacterized protein; phosphoesterase RecJ domain-containing protein 276378 11053077 Murru_0269 Muricauda ruestringensis DSM 13258 phosphoesterase RecJ domain-containing protein YP_004786747.1 275362 D 886377 CDS YP_004786748.1 344201605 11053078 276375..276923 1 NC_015945.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; TIGRFAM: peptidyl-prolyl isomerase, gliding motility-associated; InterPro IPR019869:IPR001179; KEGG: fbc:FB2170_09536 putative peptidyl-prolylisomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Putative peptidyl-prolylisomerase; TIGRFAM: Gliding motility-associated, peptidyl-prolyl isomerase, GldI; peptidyl-prolyl isomerase, gliding motility-associated 276923 11053078 Murru_0270 Muricauda ruestringensis DSM 13258 peptidyl-prolyl isomerase, gliding motility-associated YP_004786748.1 276375 D 886377 CDS YP_004786749.1 344201606 11053079 276935..278038 1 NC_015945.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130:IPR001179; KEGG: fbc:FB2170_09531 peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 278038 11053079 Murru_0271 Muricauda ruestringensis DSM 13258 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_004786749.1 276935 D 886377 CDS YP_004786750.1 344201607 11053080 278091..279215 1 NC_015945.1 KEGG: fbc:FB2170_09516 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 279215 11053080 Murru_0272 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786750.1 278091 D 886377 CDS YP_004786751.1 344201608 11053081 279275..282220 1 NC_015945.1 PFAM: Amidohydrolase family; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: fbc:FB2170_09511 hypothetical protein; PFAM: Amidohydrolase 1; SPTR: Secreted enzyme; amidohydrolase 282220 11053081 Murru_0273 Muricauda ruestringensis DSM 13258 amidohydrolase YP_004786751.1 279275 D 886377 CDS YP_004786752.1 344201609 11053082 282231..283529 1 NC_015945.1 COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR013108; KEGG: fbc:FB2170_09506 putative amidohydrolase; PFAM: Amidohydrolase 3; SPTR: Predicted amidohydrolase; amidohydrolase 283529 11053082 Murru_0274 Muricauda ruestringensis DSM 13258 amidohydrolase YP_004786752.1 282231 D 886377 CDS YP_004786753.1 344201610 11053083 complement(283587..284384) 1 NC_015945.1 KEGG: rbi:RB2501_03395 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 284384 11053083 Murru_0275 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786753.1 283587 R 886377 CDS YP_004786754.1 344201611 11053084 284434..285255 1 NC_015945.1 PFAM: SpoU rRNA Methylase family; COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: cat:CA2559_08786 putative rRNA methylase; PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: 23S rRNA methyltransferase; tRNA/rRNA methyltransferase SpoU 285255 11053084 Murru_0276 Muricauda ruestringensis DSM 13258 tRNA/rRNA methyltransferase SpoU YP_004786754.1 284434 D 886377 CDS YP_004786755.1 344201612 11053085 285259..286491 1 NC_015945.1 PFAM: Peptidase family M48; COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: fbc:FB2170_09331 STE24 endopeptidase; PFAM: Peptidase M48; PRIAM: Ste24 endopeptidase; SPTR: Ste24 endopeptidase; Ste24 endopeptidase 286491 11053085 Murru_0277 Muricauda ruestringensis DSM 13258 Ste24 endopeptidase YP_004786755.1 285259 D 886377 CDS YP_004786756.1 344201613 11053086 286536..288740 1 NC_015945.1 PFAM: HD domain; Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family; COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterProIPR003607:IPR007685:IPR004811:IPR006674:IPR 004095; KEGG: rbi:RB2501_01775 GTP pyrophosphokinase; PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD subdomain; TGS; PRIAM: GTP diphosphokinase; SMART: RelA/SpoT; Metal-dependent phosphohydrolase, HD domain; SPTR: GTP pyrophosphokinase; TIGRFAM: RelA/SpoT protein; (p)ppGpp synthetase I SpoT/RelA 288740 11053086 Murru_0278 Muricauda ruestringensis DSM 13258 (p)ppGpp synthetase I SpoT/RelA YP_004786756.1 286536 D 886377 CDS YP_004786757.1 344201614 11053087 288782..289237 1 NC_015945.1 PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: fbc:FB2170_09321 ferric uptake regulation protein; PFAM: Ferric-uptake regulator; SPTR: Ferric uptake regulation protein; Fur family ferric uptake regulator 289237 11053087 Murru_0279 Muricauda ruestringensis DSM 13258 Fur family ferric uptake regulator YP_004786757.1 288782 D 886377 CDS YP_004786758.1 344201615 11053088 289250..290518 1 NC_015945.1 PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase; COGs: COG0104 Adenylosuccinate synthase; HAMAP: Adenylosuccinate synthetase; InterPro IPR001114; KEGG: fbc:FB2170_09316 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; PRIAM: Adenylosuccinate synthase; SMART: Adenylosuccinate synthetase; SPTR: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; adenylosuccinate synthetase 290518 11053088 Murru_0280 Muricauda ruestringensis DSM 13258 adenylosuccinate synthetase YP_004786758.1 289250 D 886377 CDS YP_004786759.1 344201616 11053089 290628..291107 1 NC_015945.1 PFAM: Ferritin-like domain; COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR008331; KEGG: chu:CHU_2021 DNA-binding protein; DPS family protein; PFAM: Ferritin/Dps protein; SPTR: DNA-binding protein; DPS family protein; ferritin Dps family protein 291107 11053089 Murru_0281 Muricauda ruestringensis DSM 13258 ferritin Dps family protein YP_004786759.1 290628 D 886377 CDS YP_004786760.1 344201617 11053090 291286..292989 1 NC_015945.1 KEGG: fbc:FB2170_09271 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 292989 11053090 Murru_0282 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786760.1 291286 D 886377 CDS YP_004786761.1 344201618 11053091 292989..294185 1 NC_015945.1 PFAM: Aminotransferase class-III; COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR005814; KEGG: fbc:FB2170_09266 acetylornithine aminotransferase; PFAM: Aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: Acetylornithine aminotransferase; acetylornithine transaminase 294185 11053091 Murru_0283 Muricauda ruestringensis DSM 13258 acetylornithine transaminase YP_004786761.1 292989 D 886377 CDS YP_004786762.1 344201619 11053092 294272..295672 1 NC_015945.1 PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440; KEGG: fbc:FB2170_09261 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: TPR repeat protein; hypothetical protein 295672 11053092 Murru_0284 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786762.1 294272 D 886377 CDS YP_004786763.1 344201620 11053093 295694..296611 1 NC_015945.1 PFAM: Domain of unknown function (DUF368); COGs: COG2035 membrane protein; InterPro IPR007163; KEGG: fbc:FB2170_09256 hypothetical protein; PFAM: Protein of unknown function DUF368; SPTR: Putative uncharacterized protein; hypothetical protein 296611 11053093 Murru_0285 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786763.1 295694 D 886377 CDS YP_004786764.1 344201621 11053094 296631..297668 1 NC_015945.1 PFAM: Domain of unknown function (DUF368); COGs: COG2035 membrane protein; InterPro IPR007163; KEGG: fbc:FB2170_09251 hypothetical protein; PFAM: Protein of unknown function DUF368; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 297668 11053094 Murru_0286 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786764.1 296631 D 886377 CDS YP_004786765.1 344201622 11053095 297643..298374 1 NC_015945.1 PFAM: Shikimate dehydrogenase substrate binding domain; TIGRFAM: shikimate 5-dehydrogenase; COGs: COG0169 Shikimate 5-dehydrogenase; InterPro IPR013708:IPR006151; KEGG: fbc:FB2170_09246 putative shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; SPTR: Putative shikimate 5-dehydrogenase; shikimate dehydrogenase 298374 11053095 Murru_0287 Muricauda ruestringensis DSM 13258 shikimate dehydrogenase YP_004786765.1 297643 D 886377 CDS YP_004786766.1 344201623 11053096 298517..300604 1 NC_015945.1 PFAM: Domain of Unknown Function (DUF349); InterPro IPR007139; KEGG: fbc:FB2170_09241 hypothetical protein; PFAM: Protein of unknown function DUF349; SPTR: Putative uncharacterized protein; hypothetical protein 300604 11053096 Murru_0288 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786766.1 298517 D 886377 CDS YP_004786767.1 344201624 11053097 complement(300681..301100) 1 NC_015945.1 PFAM: CBS domain; COGs: COG2524 transcriptional regulator protein; InterPro IPR000644; KEGG: fbc:FB2170_09236 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: Putative uncharacterized protein; putative signal transduction protein 301100 11053097 Murru_0289 Muricauda ruestringensis DSM 13258 putative signal transduction protein YP_004786767.1 300681 R 886377 CDS YP_004786768.1 344201625 11053098 complement(301174..302745) 1 NC_015945.1 PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG; COGs: COG1418 HD superfamily hydrolase; HAMAP: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; InterProIPR004087:IPR003607:IPR017705:IPR006675:IPR 018111:IPR006674; KEGG: fbc:FB2170_09191 hypothetical protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; K Homology, type 1, subgroup; SMART: Metal-dependent phosphohydrolase, HD domain; K Homology; SPTR: Putative uncharacterized protein; TIGRFAM: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; Uncharacterised protein family HDIG; 2,3 cyclic-nucleotide 2-phosphodiesterase 302745 11053098 Murru_0290 Muricauda ruestringensis DSM 13258 2,3 cyclic-nucleotide 2-phosphodiesterase YP_004786768.1 301174 R 886377 CDS YP_004786769.1 344201626 11053100 complement(302962..303255) 1 NC_015945.1 PFAM: Cell division protein ZapA; KEGG: fbc:FB2170_09186 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 303255 11053100 Murru_0291 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786769.1 302962 R 886377 CDS YP_004786770.1 344201627 11053101 complement(303270..303563) 1 NC_015945.1 KEGG: fbc:FB2170_09181 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 303563 11053101 Murru_0292 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786770.1 303270 R 886377 CDS YP_004786771.1 344201628 11053102 303733..305424 1 NC_015945.1 PFAM: Peptidase family M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: fbc:FB2170_09176 putative peptidase; PFAM: Peptidase M23; SPTR: Putative peptidase; peptidase M23 305424 11053102 Murru_0293 Muricauda ruestringensis DSM 13258 peptidase M23 YP_004786771.1 303733 D 886377 CDS YP_004786772.1 344201629 11053103 305637..306284 1 NC_015945.1 KEGG: fbc:FB2170_09166 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 306284 11053103 Murru_0294 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786772.1 305637 D 886377 CDS YP_004786773.1 344201630 11053104 complement(306287..307435) 1 NC_015945.1 PFAM: Aminotransferase class-V; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: fbc:FB2170_09161 putative cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Putative cysteine desulfurase; cysteine desulfurase 307435 11053104 Murru_0295 Muricauda ruestringensis DSM 13258 cysteine desulfurase YP_004786773.1 306287 R 886377 CDS YP_004786774.1 344201631 11053105 307546..308067 1 NC_015945.1 KEGG: fbc:FB2170_09156 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 308067 11053105 Murru_0296 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786774.1 307546 D 886377 CDS YP_004786775.1 344201632 11053106 complement(308064..308606) 1 NC_015945.1 PFAM: Smr domain; InterPro IPR002625; KEGG: fbc:FB2170_09151 hypothetical protein; PFAM: Smr protein/MutS2 C-terminal; SPTR: Putative uncharacterized protein; Smr protein/MutS2 308606 11053106 Murru_0297 Muricauda ruestringensis DSM 13258 Smr protein/MutS2 YP_004786775.1 308064 R 886377 CDS YP_004786776.1 344201633 11053107 308618..308998 1 NC_015945.1 PFAM: Protein of unknown function (DUF2752); KEGG: fbc:FB2170_09146 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 308998 11053107 Murru_0298 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786776.1 308618 D 886377 CDS YP_004786777.1 344201634 11053108 309011..309334 1 NC_015945.1 KEGG: fbc:FB2170_09141 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 309334 11053108 Murru_0299 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786777.1 309011 D 886377 CDS YP_004786778.1 344201635 11053109 309345..309656 1 NC_015945.1 PFAM: Interferon-induced transmembrane protein; KEGG: fbc:FB2170_09136 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 309656 11053109 Murru_0300 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786778.1 309345 D 886377 CDS YP_004786779.1 344201636 11053110 complement(309653..311854) 1 NC_015945.1 PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; COGs: COG0514 Superfamily II DNA helicase; InterProIPR014001:IPR001650:IPR018982:IPR002121:IPR 004589:IPR011545; KEGG: fbc:FB2170_00545 ATP-dependent DNA helicase RecQ; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; RQC domain; Helicase/RNase D C-terminal, HRDC domain; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; RQC domain; Helicase/RNase D C-terminal, HRDC domain; SPTR: ATP-dependent DNA helicase recQ; TIGRFAM: DNA helicase, ATP-dependent, RecQ type; RecQ familyATP-dependent DNA helicase 311854 11053110 Murru_0301 Muricauda ruestringensis DSM 13258 RecQ familyATP-dependent DNA helicase YP_004786779.1 309653 R 886377 CDS YP_004786780.1 344201637 11053111 312040..313005 1 NC_015945.1 PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR004800:IPR001347:IPR000644; KEGG: fbc:FB2170_00550 hypothetical protein; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core; PRIAM: Arabinose-5-phosphate isomerase; SPTR: Putative uncharacterized protein; TIGRFAM: KpsF/GutQ; KpsF/GutQ family protein 313005 11053111 Murru_0302 Muricauda ruestringensis DSM 13258 KpsF/GutQ family protein YP_004786780.1 312040 D 886377 CDS YP_004786781.1 344201638 11053112 313005..313844 1 NC_015945.1 PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC; COGs: COG0805 Sec-independent protein secretion pathway component TatC; InterPro IPR019822:IPR002033; KEGG: fbc:FB2170_00555 sec-independent protein translocase TatC; PFAM: Sec-independent periplasmic protein translocase; SPTR: Sec-independent protein translocase TatC; TIGRFAM: Twin arginine-targeting protein translocase, TatC; Sec-independent protein translocase subunit TatC 313844 11053112 Murru_0303 Muricauda ruestringensis DSM 13258 Sec-independent protein translocase subunit TatC YP_004786781.1 313005 D 886377 CDS YP_004786782.1 344201639 11053113 313837..314187 1 NC_015945.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain; COGs: COG0599 gamma-carboxymuconolactone decarboxylase subunit; InterPro IPR004675:IPR003779; KEGG: gfo:GFO_0589 carboxymuconolactone decarboxylase family protein; PFAM: Carboxymuconolactone decarboxylase; SPTR: Alkylhydroperoxidase like protein, AhpD family; TIGRFAM: Alkylhydroperoxidase AhpD core; alkylhydroperoxidase 314187 11053113 Murru_0304 Muricauda ruestringensis DSM 13258 alkylhydroperoxidase YP_004786782.1 313837 D 886377 CDS YP_004786783.1 344201640 11053114 314245..314985 1 NC_015945.1 PFAM: ABC transporter; COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_00560 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; manually curated; sulfate-transporting ATPase 314985 11053114 Murru_0305 Muricauda ruestringensis DSM 13258 sulfate-transporting ATPase YP_004786783.1 314245 D 886377 CDS YP_004786784.1 344201641 11053115 complement(314988..315713) 1 NC_015945.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; COGs: COG1183 Phosphatidylserine synthase; InterPro IPR000462; KEGG: fbc:FB2170_00565 putative phosphatidylserine synthase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: Putative phosphatidylserine synthase; CDP-alcohol phosphatidyltransferase 315713 11053115 Murru_0306 Muricauda ruestringensis DSM 13258 CDP-alcohol phosphatidyltransferase YP_004786784.1 314988 R 886377 CDS YP_004786785.1 344201642 11053116 315765..316985 1 NC_015945.1 KEGG: fbc:FB2170_00570 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 316985 11053116 Murru_0307 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786785.1 315765 D 886377 CDS YP_004786786.1 344201643 11053117 317007..318878 1 NC_015945.1 PFAM: ABC transporter; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_00575 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; ABC transporter-like protein 318878 11053117 Murru_0308 Muricauda ruestringensis DSM 13258 ABC transporter-like protein YP_004786786.1 317007 D 886377 CDS YP_004786787.1 344201644 11053118 318880..319377 1 NC_015945.1 KEGG: fbc:FB2170_00580 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 319377 11053118 Murru_0309 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786787.1 318880 D 886377 CDS YP_004786788.1 344201645 11053119 319395..319556 1 NC_015945.1 hypothetical protein 319556 11053119 Murru_0310 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786788.1 319395 D 886377 CDS YP_004786789.1 344201646 11053120 319611..320171 1 NC_015945.1 PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase; COGs: COG2096 conserved hypothetical protein; InterPro IPR017858:IPR002779; KEGG: fbc:FB2170_00590 putative vitamin B12 related cobalamin adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT/PduO type; PRIAM: Cob(I)yrinic acid a,c-diamide adenosyltransferase; SPTR: Putative vitamin B12 related Cobalamin adenosyltransferase; TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal; ATP/cobalamin adenosyltransferase 320171 11053120 Murru_0311 Muricauda ruestringensis DSM 13258 ATP/cobalamin adenosyltransferase YP_004786789.1 319611 D 886377 CDS YP_004786790.1 344201647 11053121 320294..320518 1 NC_015945.1 PFAM: Protein of unknown function (DUF2795); KEGG: fbc:FB2170_00595 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 320518 11053121 Murru_0312 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786790.1 320294 D 886377 CDS YP_004786791.1 344201648 11053122 320653..324015 1 NC_015945.1 PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit; COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); HAMAP: SecA protein; InterPro IPR011115:IPR011130:IPR000185:IPR011116; KEGG: fbc:FB2170_00600 translocase; PFAM: SecA DEAD-like, N-terminal; SecA preprotein, cross-linking domain; SecA Wing/Scaffold; SMART: SecA DEAD-like, N-terminal; SecA preprotein, cross-linking domain; SPTR: Protein translocase subunit secA; TIGRFAM: SecA protein; protein translocase subunit secA 324015 11053122 Murru_0313 Muricauda ruestringensis DSM 13258 protein translocase subunit secA YP_004786791.1 320653 D 886377 CDS YP_004786792.1 344201649 11053123 324175..325392 1 NC_015945.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG3920 Signal transduction histidine kinase; InterPro IPR003594:IPR011495; KEGG: fbc:FB2170_00610 signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Signal transduction histidine kinase; signal transduction histidine kinase 325392 11053123 Murru_0314 Muricauda ruestringensis DSM 13258 signal transduction histidine kinase YP_004786792.1 324175 D 886377 CDS YP_004786793.1 344201650 11053124 complement(325457..325561) 1 NC_015945.1 hypothetical protein 325561 11053124 Murru_0315 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786793.1 325457 R 886377 CDS YP_004786794.1 344201651 11053125 complement(325564..325860) 1 NC_015945.1 KEGG: fbc:FB2170_11316 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 325860 11053125 Murru_0316 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786794.1 325564 R 886377 CDS YP_004786795.1 344201652 11053126 326124..326819 1 NC_015945.1 PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; COGs: COG0225 Peptide methionine sulfoxide reductase; HAMAP: Peptide methionine sulphoxide reductase MsrA; InterPro IPR002569; KEGG: rbi:RB2501_11597 peptide methionine sulfoxide reductase; PFAM: Peptide methionine sulphoxide reductase MsrA; PRIAM: Peptide-methionine (S)-S-oxide reductase; SPTR: Peptide methionine sulfoxide reductase msrA 2; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; peptide methionine sulfoxide reductase MsrA 326819 11053126 Murru_0317 Muricauda ruestringensis DSM 13258 peptide methionine sulfoxide reductase MsrA YP_004786795.1 326124 D 886377 CDS YP_004786796.1 344201653 11053127 complement(326905..328365) 1 NC_015945.1 KEGG: fbc:FB2170_00685 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 328365 11053127 Murru_0318 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786796.1 326905 R 886377 CDS YP_004786797.1 344201654 11053128 complement(328337..328939) 1 NC_015945.1 KEGG: fbc:FB2170_00690 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 328939 11053128 Murru_0319 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786797.1 328337 R 886377 CDS YP_004786798.1 344201655 11053129 complement(328929..329465) 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: fbc:FB2170_00695 RNA polymerase sigma-E factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 329465 11053129 Murru_0320 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004786798.1 328929 R 886377 CDS YP_004786799.1 344201656 11053130 complement(329714..330139) 1 NC_015945.1 PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, Ohr subfamily; COGs: COG1764 redox protein regulator of disulfide bond formation; InterPro IPR019953:IPR003718; KEGG: cat:CA2559_09146 organic hydroperoxide resistance protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: Organic hydroperoxide resistance protein; TIGRFAM: Peroxiredoxin, organic hydroperoxide resistance-related; Ohr subfamily peroxiredoxin 330139 11053130 Murru_0321 Muricauda ruestringensis DSM 13258 Ohr subfamily peroxiredoxin YP_004786799.1 329714 R 886377 CDS YP_004786800.1 344201657 11053131 330351..331394 1 NC_015945.1 PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase; COGs: COG1703 Putative periplasmic protein kinase ArgK and related GTPase of G3E family; InterPro IPR005129; KEGG: zpr:ZPR_1074 protein kinase ArgK; PFAM: ArgK protein; SPTR: Protein kinase ArgK; TIGRFAM: ArgK protein; LAO/AO transport system ATPase 331394 11053131 Murru_0322 Muricauda ruestringensis DSM 13258 LAO/AO transport system ATPase YP_004786800.1 330351 D 886377 CDS YP_004786801.1 344201658 11053132 331594..332556 1 NC_015945.1 PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fbc:FB2170_00710 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase; family 2 glycosyl transferase 332556 11053132 Murru_0323 Muricauda ruestringensis DSM 13258 family 2 glycosyl transferase YP_004786801.1 331594 D 886377 CDS YP_004786802.1 344201659 11053133 332537..333409 1 NC_015945.1 PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; InterPro IPR022791; KEGG: rbi:RB2501_11557 hypothetical protein; PFAM: Lysylphosphatidylglycerol synthetase/UPF0104; SPTR: Putative uncharacterized protein; lysylphosphatidylglycerol synthetase 333409 11053133 Murru_0324 Muricauda ruestringensis DSM 13258 lysylphosphatidylglycerol synthetase YP_004786802.1 332537 D 886377 CDS YP_004786803.1 344201660 11053134 complement(333406..335064) 1 NC_015945.1 COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: fbc:FB2170_00720 dolichyl-phosphate-mannose-protein mannosyltransferase family protein; PFAM: Glycosyl transferase, family 39; SPTR: Dolichyl-phosphate-mannose-protein mannosyltransferase-family protein; glycosyl transferase family protein 335064 11053134 Murru_0325 Muricauda ruestringensis DSM 13258 glycosyl transferase family protein YP_004786803.1 333406 R 886377 CDS YP_004786804.1 344201661 11053135 complement(335061..335630) 1 NC_015945.1 PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: fbc:FB2170_00725 hypothetical protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: Putative uncharacterized protein; phosphoesterase PA-phosphatase-like protein 335630 11053135 Murru_0326 Muricauda ruestringensis DSM 13258 phosphoesterase PA-phosphatase-like protein YP_004786804.1 335061 R 886377 CDS YP_004786805.1 344201662 11053136 complement(335630..335857) 1 NC_015945.1 KEGG: fbc:FB2170_00730 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 335857 11053136 Murru_0327 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786805.1 335630 R 886377 CDS YP_004786806.1 344201663 11053137 complement(336224..337591) 1 NC_015945.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: fbc:FB2170_00735 putative transport protein, multidrug efflux protein; PFAM: Multi antimicrobial extrusion protein; SPTR: Putative transport protein, multidrug efflux protein; TIGRFAM: Multi antimicrobial extrusion protein; MATE efflux family protein 337591 11053137 Murru_0328 Muricauda ruestringensis DSM 13258 MATE efflux family protein YP_004786806.1 336224 R 886377 CDS YP_004786807.1 344201664 11053138 complement(337674..338447) 1 NC_015945.1 PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein; COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR011551:IPR004518; KEGG: fbc:FB2170_00740 MazG family protein; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core; SPTR: MazG family protein; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial; MazG family protein 338447 11053138 Murru_0329 Muricauda ruestringensis DSM 13258 MazG family protein YP_004786807.1 337674 R 886377 CDS YP_004786808.1 344201665 11053139 338734..339378 1 NC_015945.1 PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; KEGG: fbc:FB2170_00800 hypothetical protein; PFAM: Lipase, GDSL; SPTR: Putative secreted protein; G-D-S-L family lipolytic protein 339378 11053139 Murru_0330 Muricauda ruestringensis DSM 13258 G-D-S-L family lipolytic protein YP_004786808.1 338734 D 886377 CDS YP_004786809.1 344201666 11053140 339391..340968 1 NC_015945.1 PFAM: Glycosyl hydrolase family 20, catalytic domain; Glycosyl hydrolase family 20, domain 2; COGs: COG3525 N-acetyl-beta-hexosaminidase; InterPro IPR015882:IPR015883; KEGG: fbc:FB2170_00805 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Acetylhexosaminidase, subunit a/b; PRIAM: Beta-N-acetylhexosaminidase; SPTR: Beta-N-acetylhexosaminidase; beta-N-acetylhexosaminidase 340968 11053140 Murru_0331 Muricauda ruestringensis DSM 13258 beta-N-acetylhexosaminidase YP_004786809.1 339391 D 886377 CDS YP_004786810.1 344201667 11053141 complement(340972..341415) 1 NC_015945.1 KEGG: fbc:FB2170_00815 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 341415 11053141 Murru_0332 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786810.1 340972 R 886377 CDS YP_004786811.1 344201668 11053142 complement(341471..342061) 1 NC_015945.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; COGs: COG0242 N-formylmethionyl-tRNA deformylase; HAMAP: Formylmethionine deformylase; InterPro IPR000181; KEGG: cat:CA2559_06160 peptide deformylase; PFAM: Formylmethionine deformylase; PRIAM: Peptide deformylase; SPTR: Peptide deformylase; TIGRFAM: Formylmethionine deformylase; peptide deformylase 342061 11053142 Murru_0333 Muricauda ruestringensis DSM 13258 peptide deformylase YP_004786811.1 341471 R 886377 CDS YP_004786812.1 344201669 11053143 complement(342066..342476) 1 NC_015945.1 PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF; COGs: COG0816 endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); HAMAP: Resolvase, holliday junction-type, YqgF-like; InterPro IPR006641:IPR005227; KEGG: fbc:FB2170_00825 Holliday junction resolvase-like protein; PFAM: Resolvase, holliday junction-type, YqgF-like; SMART: Resolvase, RNase H-like fold; SPTR: Putative Holliday junction resolvase; TIGRFAM: Resolvase, holliday junction-type, YqgF-like; Holliday junction resolvase 342476 11053143 Murru_0334 Muricauda ruestringensis DSM 13258 Holliday junction resolvase YP_004786812.1 342066 R 886377 CDS YP_004786813.1 344201670 11053144 342544..343392 1 NC_015945.1 TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; COGs: COG2171 Tetrahydrodipicolinate N-succinyltransferase; InterPro IPR001451; KEGG: fbc:FB2170_00830 hypothetical protein; PRIAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; SPTR: Putative uncharacterized protein; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 343392 11053144 Murru_0335 Muricauda ruestringensis DSM 13258 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_004786813.1 342544 D 886377 CDS YP_004786814.1 344201671 11053145 complement(343393..344439) 1 NC_015945.1 KEGG: lrf:LAR_1288 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 344439 11053145 Murru_0336 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786814.1 343393 R 886377 CDS YP_004786815.1 344201672 11053146 344534..345652 1 NC_015945.1 PFAM: UDP-galactopyranose mutase; FAD binding domain; TIGRFAM: UDP-galactopyranose mutase; COGs: COG0562 UDP-galactopyranose mutase; InterPro IPR004379:IPR003953:IPR015899; KEGG: dfe:Dfer_3361 UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase, C-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; PRIAM: UDP-galactopyranose mutase; SPTR: UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase; UDP-galactopyranose mutase 345652 11053146 Murru_0337 Muricauda ruestringensis DSM 13258 UDP-galactopyranose mutase YP_004786815.1 344534 D 886377 CDS YP_004786816.1 344201673 11053147 345843..346646 1 NC_015945.1 PFAM: Glycosyl transferase family 2; InterPro IPR001173; KEGG: rbi:RB2501_11472 putative beta-1,4-glucosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Probable beta-1,4-glucosyltransferase; family 2 glycosyl transferase 346646 11053147 Murru_0338 Muricauda ruestringensis DSM 13258 family 2 glycosyl transferase YP_004786816.1 345843 D 886377 CDS YP_004786817.1 344201674 11053148 complement(346628..347461) 1 NC_015945.1 PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: rbi:RB2501_11467 putative glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Putative glycosyltransferase; family 2 glycosyl transferase 347461 11053148 Murru_0339 Muricauda ruestringensis DSM 13258 family 2 glycosyl transferase YP_004786817.1 346628 R 886377 CDS YP_004786818.1 344201675 11053149 347528..348376 1 NC_015945.1 PFAM: Glycosyl transferase family 64 domain; KEGG: rbi:RB2501_11462 Zn-dependent alcohol dehydrogenase, class III; SPTR: Putative uncharacterized protein; Zn-dependent alcohol dehydrogenase 348376 11053149 Murru_0340 Muricauda ruestringensis DSM 13258 Zn-dependent alcohol dehydrogenase YP_004786818.1 347528 D 886377 CDS YP_004786819.1 344201676 11053150 348348..348908 1 NC_015945.1 PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; COGs: COG0009 Putative translation factor (SUA5); InterPro IPR004388:IPR006070; KEGG: fbc:FB2170_00860 hypothetical protein; PFAM: Sua5/YciO/YrdC, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; Sua5/YciO/YrdC/YwlC family protein 348908 11053150 Murru_0341 Muricauda ruestringensis DSM 13258 Sua5/YciO/YrdC/YwlC family protein YP_004786819.1 348348 D 886377 CDS YP_004786820.1 344201677 11053151 348911..350341 1 NC_015945.1 PFAM: HD domain; Poly A polymerase head domain; TIGRFAM: uncharacterized domain HDIG; COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR002646:IPR006674; KEGG: fbc:FB2170_00865 putative polyA polymerase; PFAM: Poly A polymerase, head domain; Metal-dependent phosphohydrolase, HD subdomain; PRIAM: tRNA cytidylyltransferase; SPTR: Putative polyA polymerase; polynucleotide adenylyltransferase/metal dependent phosphohydrolase 350341 11053151 Murru_0342 Muricauda ruestringensis DSM 13258 polynucleotide adenylyltransferase/metal dependent phosphohydrolase YP_004786820.1 348911 D 886377 CDS YP_004786821.1 344201678 11053152 350338..351351 1 NC_015945.1 PFAM: Cytochrome oxidase assembly protein; COGs: COG1612 Uncharacterized protein required for cytochrome oxidase assembly; HAMAP: Heme A synthase/Protoheme IX farnesyltransferase; InterPro IPR003780; KEGG: fbc:FB2170_00870 cytochrome oxidase assembly; PFAM: Heme A synthase/Protoheme IX farnesyltransferase; SPTR: Heme A synthase; Heme A synthase 351351 11053152 Murru_0343 Muricauda ruestringensis DSM 13258 Heme A synthase YP_004786821.1 350338 D 886377 CDS YP_004786822.1 344201679 11053153 351394..351897 1 NC_015945.1 PFAM: Plasmid pRiA4b ORF-3-like protein; KEGG: fbc:FB2170_00875 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 351897 11053153 Murru_0344 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786822.1 351394 D 886377 CDS YP_004786823.1 344201680 11053154 351943..353001 1 NC_015945.1 KEGG: fbc:FB2170_00880 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 353001 11053154 Murru_0345 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786823.1 351943 D 886377 CDS YP_004786824.1 344201681 11053155 complement(352998..354074) 1 NC_015945.1 KEGG: fbc:FB2170_00885 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 354074 11053155 Murru_0346 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786824.1 352998 R 886377 CDS YP_004786825.1 344201682 11053156 354153..355049 1 NC_015945.1 PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_00890 hypothetical protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; ABC transporter-like protein 355049 11053156 Murru_0347 Muricauda ruestringensis DSM 13258 ABC transporter-like protein YP_004786825.1 354153 D 886377 CDS YP_004786826.1 344201683 11053157 355061..355894 1 NC_015945.1 KEGG: fbc:FB2170_00895 excinuclease ABC subunit B; SPTR: Excinuclease ABC subunit B; excinuclease ABC subunit B 355894 11053157 Murru_0348 Muricauda ruestringensis DSM 13258 excinuclease ABC subunit B YP_004786826.1 355061 D 886377 CDS YP_004786827.1 344201684 11053158 355960..357948 1 NC_015945.1 PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit; COGs: COG0556 Helicase subunit of the DNA excision repair complex; HAMAP: Excinuclease ABC, B subunit; InterProIPR014001:IPR001650:IPR004807:IPR006935:IPR 001943; KEGG: fbc:FB2170_00910 excinuclease ABC subunit B; PFAM: Helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: UvrABC system protein B; TIGRFAM: Excinuclease ABC, B subunit; UvrABC system protein B 357948 11053158 Murru_0349 Muricauda ruestringensis DSM 13258 UvrABC system protein B YP_004786827.1 355960 D 886377 CDS YP_004786828.1 344201685 11053159 complement(358039..358464) 1 NC_015945.1 PFAM: Hsp20/alpha crystallin family; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: fbc:FB2170_00915 putative heat-shock related protein; PFAM: Heat shock protein Hsp20; SPTR: Putative heat-shock related protein; heat shock protein Hsp20 358464 11053159 Murru_0350 Muricauda ruestringensis DSM 13258 heat shock protein Hsp20 YP_004786828.1 358039 R 886377 CDS YP_004786829.1 344201686 11053160 complement(358580..358981) 1 NC_015945.1 KEGG: rbi:RB2501_11392 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 358981 11053160 Murru_0351 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786829.1 358580 R 886377 CDS YP_004786830.1 344201687 11053161 complement(359097..359432) 1 NC_015945.1 KEGG: fbc:FB2170_00935 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 359432 11053161 Murru_0352 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786830.1 359097 R 886377 CDS YP_004786831.1 344201688 11053162 complement(359785..360978) 1 NC_015945.1 PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit; COGs: COG0045 Succinyl-CoA synthetase beta subunit; HAMAP: Succinyl-CoA synthetase, beta subunit; InterPro IPR005809:IPR013650:IPR005811; KEGG: fbc:FB2170_00940 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; PRIAM: Succinate--CoA ligase (ADP-forming); SPTR: Succinyl-CoA ligase [ADP-forming] subunit beta; TIGRFAM: Succinyl-CoA synthetase, beta subunit; succinyl-CoA ligase subunit beta 360978 11053162 Murru_0353 Muricauda ruestringensis DSM 13258 succinyl-CoA ligase subunit beta YP_004786831.1 359785 R 886377 CDS YP_004786832.1 344201689 11053163 complement(361098..361736) 1 NC_015945.1 PFAM: ATP-dependent protease La (LON) domain; COGs: COG2802 Uncharacterized protein similar to the N-terminal domain of Lon protease; InterPro IPR003111; KEGG: fbc:FB2170_00945 ATP-dependent protease La domain-containing protein; PFAM: Peptidase S16, lon N-terminal; SMART: Peptidase S16, lon N-terminal; SPTR: ATP-dependent protease La domain protein; peptidase S16 lon domain-containing protein 361736 11053163 Murru_0354 Muricauda ruestringensis DSM 13258 peptidase S16 lon domain-containing protein YP_004786832.1 361098 R 886377 CDS YP_004786833.1 344201690 11053164 361898..363136 1 NC_015945.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR002986:IPR022644:IPR022643; KEGG: fbc:FB2170_00950 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal; Orn/DAP/Arg decarboxylase 2, C-terminal; PRIAM: Diaminopimelate decarboxylase; SPTR: Diaminopimelate decarboxylase; TIGRFAM: Diaminopimelate decarboxylase; diaminopimelate decarboxylase 363136 11053164 Murru_0355 Muricauda ruestringensis DSM 13258 diaminopimelate decarboxylase YP_004786833.1 361898 D 886377 CDS YP_004786834.1 344201691 11053165 363236..363751 1 NC_015945.1 PFAM: Protein of unknown function, DUF255; COGs: COG2143 Thioredoxin-related protein; InterPro IPR004879; KEGG: fbc:FB2170_00955 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 363751 11053165 Murru_0356 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786834.1 363236 D 886377 CDS YP_004786835.1 344201692 11053166 complement(363784..365256) 1 NC_015945.1 PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; COGs: COG0516 IMP dehydrogenase/GMP reductase; InterPro IPR000644:IPR005990:IPR001093; KEGG: zpr:ZPR_0865 IMP dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; PRIAM: IMP dehydrogenase; SMART: Cystathionine beta-synthase, core; SPTR: Inosine-5'-monophosphate dehydrogenase; TIGRFAM: IMP dehydrogenase; inosine-5'-monophosphate dehydrogenase 365256 11053166 Murru_0357 Muricauda ruestringensis DSM 13258 inosine-5'-monophosphate dehydrogenase YP_004786835.1 363784 R 886377 CDS YP_004786836.1 344201693 11053167 365392..365760 1 NC_015945.1 KEGG: fps:FP1497 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 365760 11053167 Murru_0358 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786836.1 365392 D 886377 CDS YP_004786837.1 344201694 11053168 complement(365935..366441) 1 NC_015945.1 KEGG: fbc:FB2170_00965 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 366441 11053168 Murru_0359 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786837.1 365935 R 886377 CDS YP_004786838.1 344201695 11053169 366713..368935 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG4772 Outer membrane receptor for Fe3+-dicitrate; InterPro IPR012910:IPR000531; KEGG: rbi:RB2501_11352 putative TonB-dependent outer membrane protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Putative TonB-dependent outer membrane protein; TonB-dependent receptor 368935 11053169 Murru_0360 Muricauda ruestringensis DSM 13258 TonB-dependent receptor YP_004786838.1 366713 D 886377 CDS YP_004786839.1 344201696 11053170 complement(369096..369959) 1 NC_015945.1 PFAM: HMGL-like; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891; KEGG: fbc:FB2170_00980 hydroxymethylglutaryl-CoA lyase like protein; PFAM: Pyruvate carboxyltransferase; PRIAM: Hydroxymethylglutaryl-CoA lyase; SPTR: Hydroxymethylglutaryl-CoA lyase like protein; manually curated; hydroxymethylglutaryl-CoA lyase 369959 11053170 Murru_0361 Muricauda ruestringensis DSM 13258 hydroxymethylglutaryl-CoA lyase YP_004786839.1 369096 R 886377 CDS YP_004786840.1 344201697 11053171 complement(369981..370637) 1 NC_015945.1 PFAM: LysE type translocator; COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: fbc:FB2170_00985 lysine exporter protein LysE/YggA; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Lysine exporter protein (LYSE/YGGA); lysine exporter protein LysE/YggA 370637 11053171 Murru_0362 Muricauda ruestringensis DSM 13258 lysine exporter protein LysE/YggA YP_004786840.1 369981 R 886377 CDS YP_004786841.1 344201698 11053172 complement(370644..371684) 1 NC_015945.1 PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2; COGs: COG0167 Dihydroorotate dehydrogenase; HAMAP: Dihydroorotate dehydrogenase, class 2; InterPro IPR005719:IPR012135; KEGG: fbc:FB2170_00995 dihydroorotate dehydrogenase; PFAM: Dihydroorotate dehydrogenase, class 1/ 2; PRIAM: Dihydroorotate oxidase; SPTR: Dihydroorotate dehydrogenase; TIGRFAM: Dihydroorotate dehydrogenase, class 2; dihydroorotate dehydrogenase 371684 11053172 Murru_0363 Muricauda ruestringensis DSM 13258 dihydroorotate dehydrogenase YP_004786841.1 370644 R 886377 CDS YP_004786842.1 344201699 11053173 complement(371741..372160) 1 NC_015945.1 KEGG: fbc:FB2170_01000 peptidase T; SPTR: Peptidase T; peptidase T 372160 11053173 Murru_0364 Muricauda ruestringensis DSM 13258 peptidase T YP_004786842.1 371741 R 886377 CDS YP_004786843.1 344201700 11053174 372264..373493 1 NC_015945.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T; COGs: COG2195 Di- and tripeptidase; HAMAP: Peptidase M20B, tripeptide aminopeptidase; InterPro IPR010161:IPR002933:IPR011650; KEGG: fbc:FB2170_01005 peptidase T; PFAM: Peptidase M20, dimerisation; Peptidase M20; PRIAM: Tripeptide aminopeptidase; SPTR: Peptidase T; TIGRFAM: Peptidase M20B, tripeptide aminopeptidase; peptidase T 373493 11053174 Murru_0365 Muricauda ruestringensis DSM 13258 peptidase T YP_004786843.1 372264 D 886377 CDS YP_004786844.1 344201701 11053175 373463..374086 1 NC_015945.1 PFAM: Domain of unknown function (DU1801); COGs: COG4430 conserved hypothetical protein; InterPro IPR014922; KEGG: rbi:RB2501_11317 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: Putative uncharacterized protein; hypothetical protein 374086 11053175 Murru_0366 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786844.1 373463 D 886377 CDS YP_004786845.1 344201702 11053176 374246..374764 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 374764 11053176 Murru_0367 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786845.1 374246 D 886377 CDS YP_004786846.1 344201703 11053178 375063..375434 1 NC_015945.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: lby:Lbys_3047 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Putative uncharacterized protein; bleomycin resistance protein 375434 11053178 Murru_0369 Muricauda ruestringensis DSM 13258 bleomycin resistance protein YP_004786846.1 375063 D 886377 CDS YP_004786847.1 344201704 11053180 375905..376465 1 NC_015945.1 InterPro IPR005625; KEGG: ran:Riean_1759 DNA mismatch repair protein; PFAM: PepSY-associated TM helix; SPTR: Putative uncharacterized protein; PepSY-associated TM helix domain-containing protein 376465 11053180 Murru_0371 Muricauda ruestringensis DSM 13258 PepSY-associated TM helix domain-containing protein YP_004786847.1 375905 D 886377 CDS YP_004786848.1 344201705 11053181 complement(376586..377983) 1 NC_015945.1 PFAM: PA domain; Peptidase family M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: fbc:FB2170_01100 peptidase, M28D family protein; PFAM: Peptidase M28; SPTR: Peptidase, M28D family protein; peptidase M28 377983 11053181 Murru_0372 Muricauda ruestringensis DSM 13258 peptidase M28 YP_004786848.1 376586 R 886377 CDS YP_004786849.1 344201706 11053182 complement(377980..378864) 1 NC_015945.1 PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family; COGs: COG2326 conserved hypothetical protein; InterPro IPR022300:IPR022488; KEGG: fbc:FB2170_01105 hypothetical protein; PFAM: Polyphosphate kinase-2-related; SPTR: Putative uncharacterized protein; TIGRFAM: Polyphosphate:nucleotide phosphotransferase, PPK2; polyphosphate:nucleotide phosphotransferase 378864 11053182 Murru_0373 Muricauda ruestringensis DSM 13258 polyphosphate:nucleotide phosphotransferase YP_004786849.1 377980 R 886377 CDS YP_004786850.1 344201707 11053183 379047..379757 1 NC_015945.1 KEGG: fbc:FB2170_01110 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 379757 11053183 Murru_0374 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786850.1 379047 D 886377 CDS YP_004786851.1 344201708 11053184 complement(379760..380923) 1 NC_015945.1 PFAM: Response regulator receiver domain; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078; KEGG: fbc:FB2170_01115 C4-dicarboxylate transport transcriptional regulatory protein; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core; SPTR: C4-dicarboxylate transport transcriptional regulatory protein; putative two component sigma-54 specific transcriptional regulator 380923 11053184 Murru_0375 Muricauda ruestringensis DSM 13258 putative two component sigma-54 specific transcriptional regulator YP_004786851.1 379760 R 886377 CDS YP_004786852.1 344201709 11053185 complement(380934..381830) 1 NC_015945.1 KEGG: fbc:FB2170_01120 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 381830 11053185 Murru_0376 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786852.1 380934 R 886377 CDS YP_004786853.1 344201710 11053186 complement(381837..382724) 1 NC_015945.1 PFAM: Mechanosensitive ion channel; COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: rbi:RB2501_11207 putative efflux protein; PFAM: Mechanosensitive ion channel MscS; SPTR: Putative efflux protein; mechanosensitive ion channel protein MscS 382724 11053186 Murru_0377 Muricauda ruestringensis DSM 13258 mechanosensitive ion channel protein MscS YP_004786853.1 381837 R 886377 CDS YP_004786854.1 344201711 11053187 complement(382731..384068) 1 NC_015945.1 COGs: COG1668 ABC-type Na+ efflux pump permease component; KEGG: fbc:FB2170_01125 ABC transporter permease; SPTR: ABC transporter, permease protein, putative; ABC transporter permease 384068 11053187 Murru_0378 Muricauda ruestringensis DSM 13258 ABC transporter permease YP_004786854.1 382731 R 886377 CDS YP_004786855.1 344201712 11053188 complement(384058..384996) 1 NC_015945.1 PFAM: ABC transporter; COGs: COG4152 ABC-type uncharacterized transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_01130 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; ABC transporter-like protein 384996 11053188 Murru_0379 Muricauda ruestringensis DSM 13258 ABC transporter-like protein YP_004786855.1 384058 R 886377 CDS YP_004786856.1 344201713 11053189 complement(385258..386379) 1 NC_015945.1 PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ; COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; HAMAP: Chaperone DnaJ; InterPro IPR001623:IPR012724:IPR001305:IPR002939; KEGG: fbc:FB2170_01135 chaperone protein DnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, cysteine-rich domain; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Chaperone protein dnaJ; chaperone protein dnaJ 386379 11053189 Murru_0380 Muricauda ruestringensis DSM 13258 chaperone protein dnaJ YP_004786856.1 385258 R 886377 CDS YP_004786857.1 344201714 11053190 complement(386386..386961) 1 NC_015945.1 PFAM: GrpE; COGs: COG0576 Molecular chaperone GrpE (heat shock protein); HAMAP: GrpE nucleotide exchange factor; InterPro IPR000740; KEGG: fbc:FB2170_01140 GrpE protein; PFAM: GrpE nucleotide exchange factor; SPTR: Protein grpE; protein grpE 386961 11053190 Murru_0381 Muricauda ruestringensis DSM 13258 protein grpE YP_004786857.1 386386 R 886377 CDS YP_004786858.1 344201715 11053191 complement(387112..388056) 1 NC_015945.1 PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein; COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR010099:IPR005913:IPR013549; KEGG: fbc:FB2170_01145 cell division inhibitor; PFAM: Domain of unknown function DUF1731, C-terminal; dTDP-4-dehydrorhamnose reductase; SPTR: Cell division inhibitor; hypothetical protein 388056 11053191 Murru_0382 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786858.1 387112 R 886377 CDS YP_004786859.1 344201716 11053192 complement(388188..388853) 1 NC_015945.1 PFAM: Protein of unknown function (DUF752); COGs: COG4121 conserved hypothetical protein; InterPro IPR008471; KEGG: fbc:FB2170_01150 hypothetical protein; PFAM: Domain of unknown function DUF752; SPTR: Putative uncharacterized protein; hypothetical protein 388853 11053192 Murru_0383 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786859.1 388188 R 886377 CDS YP_004786860.1 344201717 11053193 complement(388850..389326) 1 NC_015945.1 KEGG: fbc:FB2170_01155 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 389326 11053193 Murru_0384 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786860.1 388850 R 886377 CDS YP_004786861.1 344201718 11053194 389433..390503 1 NC_015945.1 PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II; COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR005786:IPR001544; KEGG: rbi:RB2501_11167 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV; PRIAM: Branched-chain-amino-acid transaminase; SPTR: Branched-chain-amino-acid aminotransferase; TIGRFAM: Branched-chain amino acid aminotransferase II; branched-chain amino acid aminotransferase 390503 11053194 Murru_0385 Muricauda ruestringensis DSM 13258 branched-chain amino acid aminotransferase YP_004786861.1 389433 D 886377 CDS YP_004786862.1 344201719 11053195 complement(390537..390923) 1 NC_015945.1 PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; KEGG: fbc:FB2170_01172 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 390923 11053195 Murru_0386 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786862.1 390537 R 886377 CDS YP_004786863.1 344201720 11053196 390963..391151 1 NC_015945.1 KEGG: fbc:FB2170_01177 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 391151 11053196 Murru_0387 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786863.1 390963 D 886377 CDS YP_004786864.1 344201721 11053197 391270..391449 1 NC_015945.1 hypothetical protein 391449 11053197 Murru_0388 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786864.1 391270 D 886377 CDS YP_004786865.1 344201722 11053198 391466..391840 1 NC_015945.1 PFAM: CrcB-like protein; TIGRFAM: crcB protein; COGs: COG0239 Integral membrane protein possibly involved in chromosome condensation; HAMAP: Camphor resistance CrcB protein; InterPro IPR003691; KEGG: fbc:FB2170_01182 hypothetical protein; PFAM: Camphor resistance CrcB protein; SPTR: Protein CrcB homolog; TIGRFAM: Camphor resistance CrcB protein; CrcB-like protein 391840 11053198 Murru_0389 Muricauda ruestringensis DSM 13258 CrcB-like protein YP_004786865.1 391466 D 886377 CDS YP_004786866.1 344201723 11053199 392110..392448 1 NC_015945.1 PFAM: Nitrogen regulatory protein P-II; COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: rbi:RB2501_11137 P-II family protein; PFAM: Nitrogen regulatory protein PII; SMART: Nitrogen regulatory protein PII; SPTR: P-II family protein; nitrogen regulatory protein P-II 392448 11053199 Murru_0390 Muricauda ruestringensis DSM 13258 nitrogen regulatory protein P-II YP_004786866.1 392110 D 886377 CDS YP_004786867.1 344201724 11053200 392481..393761 1 NC_015945.1 PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; COGs: COG0004 Ammonia permease; InterPro IPR001905; KEGG: zpr:ZPR_3134 ammonium transporter; PFAM: Ammonium transporter; SPTR: Ammonium transporter; TIGRFAM: Ammonium transporter; ammonium transporter 393761 11053200 Murru_0391 Muricauda ruestringensis DSM 13258 ammonium transporter YP_004786867.1 392481 D 886377 CDS YP_004786868.1 344201725 11053201 393896..394951 1 NC_015945.1 KEGG: rbi:RB2501_11127 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 394951 11053201 Murru_0392 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786868.1 393896 D 886377 CDS YP_004786869.1 344201726 11053202 complement(395006..395644) 1 NC_015945.1 PFAM: Protein of unknown function (DUF1684); COGs: COG3358 conserved hypothetical protein; InterPro IPR012467; KEGG: fbc:FB2170_01202 hypothetical protein; PFAM: Protein of unknown function DUF1684; SPTR: Putative uncharacterized protein; hypothetical protein 395644 11053202 Murru_0393 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786869.1 395006 R 886377 CDS YP_004786870.1 344201727 11053203 complement(395709..397130) 1 NC_015945.1 KEGG: fbc:FB2170_01217 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 397130 11053203 Murru_0394 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786870.1 395709 R 886377 CDS YP_004786871.1 344201728 11053204 complement(397193..397645) 1 NC_015945.1 PFAM: AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019888:IPR019887; KEGG: rbi:RB2501_11112 putative transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; SPTR: Probable transcriptional regulatory protein, AsnC family protein; AsnC family transcriptional regulator 397645 11053204 Murru_0395 Muricauda ruestringensis DSM 13258 AsnC family transcriptional regulator YP_004786871.1 397193 R 886377 CDS YP_004786872.1 344201729 11053205 397767..398168 1 NC_015945.1 KEGG: fbc:FB2170_01232 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 398168 11053205 Murru_0396 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786872.1 397767 D 886377 CDS YP_004786873.1 344201730 11053206 complement(398178..401753) 1 NC_015945.1 PFAM: ArgK protein; Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase C-terminal domain; COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006158:IPR005129:IPR006099; KEGG: gfo:GFO_0483 methylmalonyl-CoA mutase-like protein; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; ArgK protein; Cobalamin (vitamin B12)-binding; PRIAM: Methylmalonyl-CoA mutase; SPTR: Methylmalonyl-CoA mutase-like protein; methylmalonyl-CoA mutase 401753 11053206 Murru_0397 Muricauda ruestringensis DSM 13258 methylmalonyl-CoA mutase YP_004786873.1 398178 R 886377 CDS YP_004786874.1 344201731 11053207 401779..402627 1 NC_015945.1 PFAM: Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase; COGs: COG0788 Formyltetrahydrofolate hydrolase; InterPro IPR004810:IPR002912:IPR002376; KEGG: fbc:FB2170_01237 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT; PRIAM: Formyltetrahydrofolate deformylase; SPTR: Formyltetrahydrofolate deformylase; TIGRFAM: Formyltetrahydrofolate deformylase; formyltetrahydrofolate deformylase 402627 11053207 Murru_0398 Muricauda ruestringensis DSM 13258 formyltetrahydrofolate deformylase YP_004786874.1 401779 D 886377 CDS YP_004786875.1 344201732 11053208 402846..404198 1 NC_015945.1 PFAM: Major Facilitator Superfamily; COGs: COG2211 Na+/melibiose symporter and related transporter; InterPro IPR011701; KEGG: zpr:ZPR_2820 sugar (GPH):cation symporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Sugar (GPH):cation symporter; major facilitator superfamily protein 404198 11053208 Murru_0399 Muricauda ruestringensis DSM 13258 major facilitator superfamily protein YP_004786875.1 402846 D 886377 CDS YP_004786876.1 344201733 11053209 404308..406599 1 NC_015945.1 PFAM: Glycosyl hydrolase family 65, C-terminal domain; Glycosyl hydrolase family 65, N-terminal domain; Glycosyl hydrolase family 65 central catalytic domain; COGs: COG1554 Trehalose and maltose hydrolase (possible phosphorylase); InterPro IPR005196:IPR005195:IPR005194; KEGG: fbc:FB2170_08179 trehalose/maltose hydrolase (phosphorylase); PFAM: Glycoside hydrolase, family 65, central catalytic; Glycoside hydrolase, family 65, N-terminal; Glycoside hydrolase, family 65, C-terminal; PRIAM: Kojibiose phosphorylase; SPTR: Trehalose/maltose hydrolase (Phosphorylase); Kojibiose phosphorylase 406599 11053209 Murru_0400 Muricauda ruestringensis DSM 13258 Kojibiose phosphorylase YP_004786876.1 404308 D 886377 CDS YP_004786877.1 344201734 11053210 406711..407415 1 NC_015945.1 KEGG: fbc:FB2170_01242 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 407415 11053210 Murru_0401 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786877.1 406711 D 886377 CDS YP_004786878.1 344201735 11053211 complement(407600..408124) 1 NC_015945.1 KEGG: fbc:FB2170_01267 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 408124 11053211 Murru_0402 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786878.1 407600 R 886377 CDS YP_004786879.1 344201736 11053212 408323..408514 1 NC_015945.1 KEGG: fbc:FB2170_01277 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 408514 11053212 Murru_0403 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786879.1 408323 D 886377 CDS YP_004786880.1 344201737 11053213 complement(408531..409352) 1 NC_015945.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2; COGs: COG0284 Orotidine-5'-phosphate decarboxylase; HAMAP: Orotidine 5'-phosphate decarboxylase, type 2; InterPro IPR001754:IPR011995; KEGG: fbc:FB2170_01282 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase domain; PRIAM: Orotidine-5'-phosphate decarboxylase; SMART: Orotidine 5'-phosphate decarboxylase domain; SPTR: Orotidine 5'-phosphate decarboxylase; TIGRFAM: Orotidine 5'-phosphate decarboxylase, type 2; Orotidine 5'-phosphate decarboxylase 409352 11053213 Murru_0404 Muricauda ruestringensis DSM 13258 Orotidine 5'-phosphate decarboxylase YP_004786880.1 408531 R 886377 CDS YP_004786881.1 344201738 11053214 complement(409394..410470) 1 NC_015945.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1; COGs: COG0216 Protein chain release factor A; HAMAP: Peptide chain release factor 1; InterPro IPR005139:IPR004373:IPR000352; KEGG: fbc:FB2170_01287 peptide chain release factor 1; PFAM: Peptide chain release factor class I/class II; Peptide chain release factor; SMART: Peptide chain release factor; SPTR: Peptide chain release factor 1; TIGRFAM: Peptide chain release factor 1; peptide chain release factor 1 410470 11053214 Murru_0405 Muricauda ruestringensis DSM 13258 peptide chain release factor 1 YP_004786881.1 409394 R 886377 CDS YP_004786882.1 344201739 11053215 complement(410540..411835) 1 NC_015945.1 PFAM: Protein of unknown function (DUF3570); KEGG: fbc:FB2170_01292 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 411835 11053215 Murru_0406 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786882.1 410540 R 886377 CDS YP_004786883.1 344201740 11053216 complement(411870..412079) 1 NC_015945.1 KEGG: fbc:FB2170_01297 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 412079 11053216 Murru_0407 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786883.1 411870 R 886377 CDS YP_004786884.1 344201741 11053217 complement(412092..413087) 1 NC_015945.1 PFAM: ApbE family; COGs: COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; InterPro IPR003374; KEGG: fbc:FB2170_01302 membrane-associated lipoprotein involved in thiamine biosynthesis; PFAM: Thiamine synthesis ApbE/UPF0280; SPTR: Membrane-associated lipoprotein involved in thiamine biosynthesis; ApbE family lipoprotein 413087 11053217 Murru_0408 Muricauda ruestringensis DSM 13258 ApbE family lipoprotein YP_004786884.1 412092 R 886377 CDS YP_004786885.1 344201742 11053218 complement(413084..413521) 1 NC_015945.1 PFAM: Protein of unknown function, DUF255; KEGG: fbc:FB2170_01307 putative thioredoxin disulfide isomerase; SPTR: Putative thioredoxin disulfide isomerase; putative thioredoxin disulfide isomerase 413521 11053218 Murru_0409 Muricauda ruestringensis DSM 13258 putative thioredoxin disulfide isomerase YP_004786885.1 413084 R 886377 CDS YP_004786886.1 344201743 11053219 complement(413542..413982) 1 NC_015945.1 PFAM: Rieske [2Fe-2S] domain; InterPro IPR017941; KEGG: fbc:FB2170_01312 hypothetical protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Putative uncharacterized protein; Rieske (2Fe-2S) domain-containing protein 413982 11053219 Murru_0410 Muricauda ruestringensis DSM 13258 Rieske (2Fe-2S) domain-containing protein YP_004786886.1 413542 R 886377 CDS YP_004786887.1 344201744 11053220 complement(414031..415209) 1 NC_015945.1 PFAM: AIR synthase related protein, C-terminal domain; COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR010918; KEGG: fbc:FB2170_01317 putative phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase-related protein, C-terminal; PRIAM: Phosphoribosylformylglycinamidine cyclo-ligase; SPTR: Phosphoribosylformylglycinamidine cyclo-ligase; phosphoribosylformylglycinamidine cyclo-ligase 415209 11053220 Murru_0411 Muricauda ruestringensis DSM 13258 phosphoribosylformylglycinamidine cyclo-ligase YP_004786887.1 414031 R 886377 CDS YP_004786888.1 344201745 11053221 complement(415290..417476) 1 NC_015945.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal; COGs: COG3968 Uncharacterized protein related to glutamine synthetase; InterPro IPR008146; KEGG: fbc:FB2170_01322 glutamine synthetase; PFAM: Glutamine synthetase, catalytic domain; SPTR: Glutamine synthetase; glutamine synthetase 417476 11053221 Murru_0412 Muricauda ruestringensis DSM 13258 glutamine synthetase YP_004786888.1 415290 R 886377 CDS YP_004786889.1 344201746 11053222 complement(417479..417622) 1 NC_015945.1 hypothetical protein 417622 11053222 Murru_0413 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786889.1 417479 R 886377 CDS YP_004786890.1 344201747 11053223 417688..418698 1 NC_015945.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; COGs: COG0174 Glutamine synthetase; InterPro IPR008147:IPR008146; KEGG: fbc:FB2170_01327 glutamine synthetase II; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp; PRIAM: Glutamate--ammonia ligase; SPTR: Glutamine synthetase; glutamate--ammonia ligase 418698 11053223 Murru_0414 Muricauda ruestringensis DSM 13258 glutamate--ammonia ligase YP_004786890.1 417688 D 886377 CDS YP_004786891.1 344201748 11053224 complement(418760..419698) 1 NC_015945.1 PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein; COGs: COG0530 Ca2+/Na+ antiporter; InterPro IPR004481:IPR004837; KEGG: fbc:FB2170_01337 sodium/calcium exchanger; PFAM: Sodium/calcium exchanger membrane region; SPTR: Sodium/calcium exchanger; TIGRFAM: K+-dependent Na+/Ca+ exchanger-like; CaCA family Na+/Ca+ antiporter 419698 11053224 Murru_0415 Muricauda ruestringensis DSM 13258 CaCA family Na+/Ca+ antiporter YP_004786891.1 418760 R 886377 CDS YP_004786892.1 344201749 11053225 419849..420208 1 NC_015945.1 PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: fbc:FB2170_01342 putative antibiotic resistance-related regulatory protein; PFAM: Penicillinase repressor; SPTR: Putative antibiotic resistance-related regulatory protein; CopY family transcriptional repressor 420208 11053225 Murru_0416 Muricauda ruestringensis DSM 13258 CopY family transcriptional repressor YP_004786892.1 419849 D 886377 CDS YP_004786893.1 344201750 11053226 420223..421950 1 NC_015945.1 PFAM: BlaR1 peptidase M56; TonB-dependent Receptor Plug Domain; InterPro IPR008756; KEGG: rbi:RB2501_11012 hypothetical protein; PFAM: Peptidase M56, BlaR1; SPTR: Putative uncharacterized protein; peptidase M56 BlaR1 421950 11053226 Murru_0417 Muricauda ruestringensis DSM 13258 peptidase M56 BlaR1 YP_004786893.1 420223 D 886377 CDS YP_004786894.1 344201751 11053227 422474..422623 1 NC_015945.1 KEGG: fbc:FB2170_01362 adenine phosphoribosyltransferase; SPTR: Putative uncharacterized protein; adenine phosphoribosyltransferase 422623 11053227 Murru_0418 Muricauda ruestringensis DSM 13258 adenine phosphoribosyltransferase YP_004786894.1 422474 D 886377 CDS YP_004786895.1 344201752 11053228 complement(422614..423126) 1 NC_015945.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase; COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; HAMAP: Adenine phosphoribosyl transferase; InterPro IPR005764:IPR000836; KEGG: fbc:FB2170_01367 adenine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Adenine phosphoribosyltransferase; TIGRFAM: Adenine phosphoribosyl transferase; adenine phosphoribosyltransferase 423126 11053228 Murru_0419 Muricauda ruestringensis DSM 13258 adenine phosphoribosyltransferase YP_004786895.1 422614 R 886377 CDS YP_004786896.1 344201753 11053230 423619..425301 1 NC_015945.1 PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: zpr:ZPR_1605 mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase); PFAM: Sulfatase; SPTR: Mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase); sulfatase 425301 11053230 Murru_0420 Muricauda ruestringensis DSM 13258 sulfatase YP_004786896.1 423619 D 886377 CDS YP_004786897.1 344201754 11053231 425368..426468 1 NC_015945.1 PFAM: Formylglycine-generating sulfatase enzyme; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: zpr:ZPR_2997 sulfatase-modifying factor; PFAM: Sulphatase-modifying factor; SPTR: Sulfatase-modifying factor; sulfatase-modifying factor protein 426468 11053231 Murru_0421 Muricauda ruestringensis DSM 13258 sulfatase-modifying factor protein YP_004786897.1 425368 D 886377 CDS YP_004786898.1 344201755 11053232 426481..427293 1 NC_015945.1 PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: fjo:Fjoh_2992 helix-turn-helix domain-containing protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family; AraC family transcriptional regulator 427293 11053232 Murru_0422 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004786898.1 426481 D 886377 CDS YP_004786899.1 344201756 11053233 427377..429851 1 NC_015945.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1455 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor domain protein; TonB-dependent receptor plug 429851 11053233 Murru_0423 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004786899.1 427377 D 886377 CDS YP_004786900.1 344201757 11053234 complement(429943..430797) 1 NC_015945.1 PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; KEGG: fbc:FB2170_00390 putative universal stress protein UspA; SPTR: Putative universal stress protein UspA; putative universal stress protein UspA 430797 11053234 Murru_0424 Muricauda ruestringensis DSM 13258 putative universal stress protein UspA YP_004786900.1 429943 R 886377 CDS YP_004786901.1 344201758 11053235 complement(430804..431661) 1 NC_015945.1 PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: fbc:FB2170_00395 putative universal stress protein UspA; PFAM: UspA; SPTR: Putative universal stress protein UspA; UspA domain-containing protein 431661 11053235 Murru_0425 Muricauda ruestringensis DSM 13258 UspA domain-containing protein YP_004786901.1 430804 R 886377 CDS YP_004786902.1 344201759 11053236 431686..431853 1 NC_015945.1 hypothetical protein 431853 11053236 Murru_0426 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786902.1 431686 D 886377 CDS YP_004786903.1 344201760 11053237 431888..432961 1 NC_015945.1 PFAM: HlyD family secretion protein; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fbc:FB2170_14523 hypothetical protein; PFAM: Secretion protein HlyD; SPTR: Putative uncharacterized protein; TIGRFAM: Secretion protein HlyD; manually curated; RND family efflux transporter MFP subunit 432961 11053237 Murru_0427 Muricauda ruestringensis DSM 13258 RND family efflux transporter MFP subunit YP_004786903.1 431888 D 886377 CDS YP_004786904.1 344201761 11053238 432958..434220 1 NC_015945.1 PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: fbc:FB2170_14528 hypothetical protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: ABC-type transport system; hypothetical protein 434220 11053238 Murru_0428 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786904.1 432958 D 886377 CDS YP_004786905.1 344201762 11053239 434231..434908 1 NC_015945.1 PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: rbi:RB2501_11877 ATPase; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; phosphonate-transporting ATPase 434908 11053239 Murru_0429 Muricauda ruestringensis DSM 13258 phosphonate-transporting ATPase YP_004786905.1 434231 D 886377 CDS YP_004786906.1 344201763 11053240 complement(434902..435777) 1 NC_015945.1 PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: mtt:Ftrac_0166 UspA domain-containing protein; PFAM: UspA; SPTR: UspA domain protein; UspA domain-containing protein 435777 11053240 Murru_0430 Muricauda ruestringensis DSM 13258 UspA domain-containing protein YP_004786906.1 434902 R 886377 CDS YP_004786907.1 344201764 11053241 435984..436448 1 NC_015945.1 PFAM: Hsp20/alpha crystallin family; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: fbc:FB2170_00355 small heat shock protein; PFAM: Heat shock protein Hsp20; SPTR: Small heat shock protein; heat shock protein Hsp20 436448 11053241 Murru_0431 Muricauda ruestringensis DSM 13258 heat shock protein Hsp20 YP_004786907.1 435984 D 886377 CDS YP_004786908.1 344201765 11053242 436551..439196 1 NC_015945.1 PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG0474 Cation transport ATPase; InterProIPR004014:IPR001757:IPR008250:IPR005834:IPR 006068; KEGG: cyc:PCC7424_1933 ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: ATPase, P-type, ATPase-associated domain; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; PRIAM: Calcium-transporting ATPase; SMART: ATPase, P-type cation-transporter, N-terminal; SPTR: ATPase, P-type (Transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; P-type HAD superfamily ATPase 439196 11053242 Murru_0432 Muricauda ruestringensis DSM 13258 P-type HAD superfamily ATPase YP_004786908.1 436551 D 886377 CDS YP_004786909.1 344201766 11053243 439480..442026 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR001610:IPR003018:IPR003661:IPR 003594:IPR013655:IPR013767; KEGG: dfe:Dfer_5317 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; PAS fold-3; PAS fold; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; PAC motif; GAF; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS; multi-sensor signal transduction histidine kinase 442026 11053243 Murru_0433 Muricauda ruestringensis DSM 13258 multi-sensor signal transduction histidine kinase YP_004786909.1 439480 D 886377 CDS YP_004786910.1 344201767 11053244 442031..443110 1 NC_015945.1 PFAM: Bacterial regulatory proteins, crp family; Response regulator receiver domain; Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR001789:IPR000595:IPR001808; KEGG: dfe:Dfer_5316 transcriptional regulator, Crp/Fnr family; PFAM: Signal transduction response regulator, receiver domain; Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: Signal transduction response regulator, receiver domain; Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SPTR: Response Regulator Receiver Signal Transduction Histidine Kinase; Crp/Fnr family transcriptional regulator 443110 11053244 Murru_0434 Muricauda ruestringensis DSM 13258 Crp/Fnr family transcriptional regulator YP_004786910.1 442031 D 886377 CDS YP_004786911.1 344201768 11053245 complement(443171..444154) 1 NC_015945.1 PFAM: mce related protein; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: fbc:FB2170_00460 virulence factor Mce family protein; PFAM: Mammalian cell entry-related; SPTR: Virulence factor Mce family protein; mammalian cell entry domain-containing protein 444154 11053245 Murru_0435 Muricauda ruestringensis DSM 13258 mammalian cell entry domain-containing protein YP_004786911.1 443171 R 886377 CDS YP_004786912.1 344201769 11053246 complement(444156..444935) 1 NC_015945.1 PFAM: ABC transporter; COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_00465 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; phosphonate-transporting ATPase 444935 11053246 Murru_0436 Muricauda ruestringensis DSM 13258 phosphonate-transporting ATPase YP_004786912.1 444156 R 886377 CDS YP_004786913.1 344201770 11053247 complement(444932..445723) 1 NC_015945.1 PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: fbc:FB2170_00470 organic solvents resistance ABC transporter; PFAM: Domain of unknown function DUF140; SPTR: ABC-type transport system involved in resistance to organic solvents; TIGRFAM: Domain of unknown function DUF140; hypothetical protein 445723 11053247 Murru_0437 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786913.1 444932 R 886377 CDS YP_004786914.1 344201771 11053248 445745..445906 1 NC_015945.1 hypothetical protein 445906 11053248 Murru_0438 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786914.1 445745 D 886377 CDS YP_004786915.1 344201772 11053249 complement(445894..446280) 1 NC_015945.1 hypothetical protein 446280 11053249 Murru_0439 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786915.1 445894 R 886377 CDS YP_004786916.1 344201773 11053250 446325..446780 1 NC_015945.1 KEGG: fjo:Fjoh_4129 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 446780 11053250 Murru_0440 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786916.1 446325 D 886377 CDS YP_004786917.1 344201774 11053251 complement(446989..448704) 1 NC_015945.1 PFAM: Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; InterPro IPR013344:IPR013509:IPR000788; KEGG: tye:THEYE_A0131 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; PRIAM: Ribonucleoside-diphosphate reductase; SPTR: Ribonucleoside-diphosphate reductase; TIGRFAM: Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; ribonucleoside-diphosphate reductase 448704 11053251 Murru_0441 Muricauda ruestringensis DSM 13258 ribonucleoside-diphosphate reductase YP_004786917.1 446989 R 886377 CDS YP_004786918.1 344201775 11053252 complement(448754..449602) 1 NC_015945.1 PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: fbc:FB2170_14468 putative universal stress protein UspA; PFAM: UspA; SPTR: Putative universal stress protein UspA; UspA domain-containing protein 449602 11053252 Murru_0442 Muricauda ruestringensis DSM 13258 UspA domain-containing protein YP_004786918.1 448754 R 886377 CDS YP_004786919.1 344201776 11053253 complement(449760..449933) 1 NC_015945.1 hypothetical protein 449933 11053253 Murru_0443 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786919.1 449760 R 886377 CDS YP_004786920.1 344201777 11053254 complement(449999..450544) 1 NC_015945.1 KEGG: dal:Dalk_0238 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 450544 11053254 Murru_0444 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786920.1 449999 R 886377 CDS YP_004786921.1 344201778 11053255 complement(450541..450792) 1 NC_015945.1 KEGG: chu:CHU_0965 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 450792 11053255 Murru_0445 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786921.1 450541 R 886377 CDS YP_004786922.1 344201779 11053256 451080..451745 1 NC_015945.1 PFAM: Dienelactone hydrolase family; KEGG: afr:AFE_2085 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 451745 11053256 Murru_0446 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786922.1 451080 D 886377 CDS YP_004786923.1 344201780 11053257 451738..452373 1 NC_015945.1 PFAM: Phosphoribosyl transferase domain; COGs: COG1926 phosphoribosyltransferase; InterPro IPR000836; KEGG: ddi:DDB_G0284365 hypothetical protein; PFAM: Phosphoribosyltransferase; SPTR: Putative uncharacterized protein; phosphoribosyltransferase 452373 11053257 Murru_0447 Muricauda ruestringensis DSM 13258 phosphoribosyltransferase YP_004786923.1 451738 D 886377 CDS YP_004786924.1 344201781 11053258 complement(452299..452598) 1 NC_015945.1 hypothetical protein 452598 11053258 Murru_0448 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786924.1 452299 R 886377 CDS YP_004786925.1 344201782 11053259 complement(452719..453357) 1 NC_015945.1 PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: tpd:Teth39_0637 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; type 11 methyltransferase 453357 11053259 Murru_0449 Muricauda ruestringensis DSM 13258 type 11 methyltransferase YP_004786925.1 452719 R 886377 CDS YP_004786926.1 344201783 11053260 complement(453491..453697) 1 NC_015945.1 PFAM: Protein of unknown function (DUF1458); InterPro IPR009923; KEGG: cat:CA2559_01085 hypothetical protein; PFAM: Dodecin flavoprotein; SPTR: Putative uncharacterized protein; hypothetical protein 453697 11053260 Murru_0450 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786926.1 453491 R 886377 CDS YP_004786927.1 344201784 11053261 complement(453745..454224) 1 NC_015945.1 PFAM: Protein of unknown function (DUF2874); KEGG: fbc:FB2170_04930 nicotinic acid mononucleotide adenyltransferase; SPTR: Nicotinic acid mononucleotide adenyltransferase; nicotinic acid mononucleotide adenyltransferase 454224 11053261 Murru_0451 Muricauda ruestringensis DSM 13258 nicotinic acid mononucleotide adenyltransferase YP_004786927.1 453745 R 886377 CDS YP_004786928.1 344201785 11053262 454516..456915 1 NC_015945.1 PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: phosphoenolpyruvate synthase; COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterPro IPR006319:IPR002192:IPR008279:IPR000121; KEGG: min:Minf_0020 phosphoenolpyruvate synthase/pyruvate phosphate dikinase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme; PRIAM: Pyruvate, water dikinase; SPTR: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; TIGRFAM: Phosphoenolpyruvate synthase; phosphoenolpyruvate synthase 456915 11053262 Murru_0452 Muricauda ruestringensis DSM 13258 phosphoenolpyruvate synthase YP_004786928.1 454516 D 886377 CDS YP_004786929.1 344201786 11053263 457691..458092 1 NC_015945.1 PFAM: Domain of unknown function DUF302; COGs: COG3439 conserved hypothetical protein; InterPro IPR005180; KEGG: fbc:FB2170_00455 hypothetical protein; PFAM: Domain of unknown function DUF302; SPTR: Putative uncharacterized protein; hypothetical protein 458092 11053263 Murru_0453 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786929.1 457691 D 886377 CDS YP_004786930.1 344201787 11053264 458114..458284 1 NC_015945.1 KEGG: ccb:Clocel_4267 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 458284 11053264 Murru_0454 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786930.1 458114 D 886377 CDS YP_004786931.1 344201788 11053265 complement(458327..459088) 1 NC_015945.1 PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: fbc:FB2170_00420 hypothetical protein; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Putative uncharacterized protein; 3-oxoacyl-ACP reductase 459088 11053265 Murru_0455 Muricauda ruestringensis DSM 13258 3-oxoacyl-ACP reductase YP_004786931.1 458327 R 886377 CDS YP_004786932.1 344201789 11053266 complement(459085..459762) 1 NC_015945.1 PFAM: KWG Leptospira; InterPro IPR011647; KEGG: fbc:FB2170_00415 hypothetical protein; PFAM: KWG Leptospira; SPTR: Putative uncharacterized protein; KWG repeat-containing protein 459762 11053266 Murru_0456 Muricauda ruestringensis DSM 13258 KWG repeat-containing protein YP_004786932.1 459085 R 886377 CDS YP_004786933.1 344201790 11053267 complement(459873..460325) 1 NC_015945.1 PFAM: Uncharacterized conserved protein (DUF2267); COGs: COG5502 conserved hypothetical protein; KEGG: fbc:FB2170_00410 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 460325 11053267 Murru_0457 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786933.1 459873 R 886377 CDS YP_004786934.1 344201791 11053268 460675..461217 1 NC_015945.1 COGs: COG4635 Flavodoxin; InterPro IPR003680; KEGG: htu:Htur_4324 protoporphyrinogen oxidase; PFAM: Flavodoxin-like fold; SPTR: Protoporphyrinogen oxidase; NAD(P)H dehydrogenase (quinone) 461217 11053268 Murru_0458 Muricauda ruestringensis DSM 13258 NAD(P)H dehydrogenase (quinone) YP_004786934.1 460675 D 886377 CDS YP_004786935.1 344201792 11053269 461273..461728 1 NC_015945.1 PFAM: Uncharacterized conserved protein (DUF2267); COGs: COG5502 conserved hypothetical protein; KEGG: fbc:FB2170_00410 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 461728 11053269 Murru_0459 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786935.1 461273 D 886377 CDS YP_004786936.1 344201793 11053270 461890..462720 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: rbi:RB2501_03440 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family protein; AraC family transcriptional regulator 462720 11053270 Murru_0460 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004786936.1 461890 D 886377 CDS YP_004786937.1 344201794 11053271 462811..463356 1 NC_015945.1 PFAM: Cupin domain; InterPro IPR013096; KEGG: rbi:RB2501_03435 polyketide synthesis domain-containing protein; PFAM: Cupin 2, conserved barrel; SPTR: Polyketide synthesis domain protein; cupin 2 barrel domain-containing protein 463356 11053271 Murru_0461 Muricauda ruestringensis DSM 13258 cupin 2 barrel domain-containing protein YP_004786937.1 462811 D 886377 CDS YP_004786938.1 344201795 11053272 complement(463795..464238) 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 464238 11053272 Murru_0462 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786938.1 463795 R 886377 CDS YP_004786939.1 344201796 11053273 complement(464278..466053) 1 NC_015945.1 KEGG: rbi:RB2501_14364 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 466053 11053273 Murru_0463 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786939.1 464278 R 886377 CDS YP_004786940.1 344201797 11053274 complement(466065..467381) 1 NC_015945.1 KEGG: rbi:RB2501_14359 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 467381 11053274 Murru_0464 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786940.1 466065 R 886377 CDS YP_004786941.1 344201798 11053275 complement(467378..468685) 1 NC_015945.1 KEGG: rbi:RB2501_14359 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 468685 11053275 Murru_0465 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786941.1 467378 R 886377 CDS YP_004786942.1 344201799 11053276 complement(468685..471492) 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_12426 putative TonB-dependent outer membrane receptor protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative TonB-dependent outer membrane receptor protein; TonB-dependent receptor plug 471492 11053276 Murru_0466 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004786942.1 468685 R 886377 CDS YP_004786943.1 344201800 11053277 complement(471785..472387) 1 NC_015945.1 hypothetical protein 472387 11053277 Murru_0467 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786943.1 471785 R 886377 CDS YP_004786944.1 344201801 11053278 complement(472552..472827) 1 NC_015945.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; InterPro IPR003769; KEGG: fbc:FB2170_01622 ribosomal protein L11 methyltransferase; PFAM: Adaptor protein ClpS, core; SPTR: Ribosomal protein L11 methyltransferase; ATP-dependent Clp protease adaptor protein ClpS 472827 11053278 Murru_0468 Muricauda ruestringensis DSM 13258 ATP-dependent Clp protease adaptor protein ClpS YP_004786944.1 472552 R 886377 CDS YP_004786945.1 344201802 11053279 complement(472851..473684) 1 NC_015945.1 PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase; COGs: COG2264 Ribosomal protein L11 methylase; InterPro IPR010456; KEGG: fbc:FB2170_01627 ribosomal protein L11 methyltransferase; PFAM: Ribosomal L11 methyltransferase, PrmA; SPTR: Ribosomal protein L11 methyltransferase; ribosomal L11 methyltransferase 473684 11053279 Murru_0469 Muricauda ruestringensis DSM 13258 ribosomal L11 methyltransferase YP_004786945.1 472851 R 886377 CDS YP_004786946.1 344201803 11053280 complement(473688..474437) 1 NC_015945.1 PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; COGs: COG0149 Triosephosphate isomerase; InterPro IPR000652; KEGG: fbc:FB2170_01632 triosephosphate isomerase; PFAM: Triosephosphate isomerase; PRIAM: Triose-phosphate isomerase; SPTR: Triosephosphate isomerase; TIGRFAM: Triosephosphate isomerase; triosephosphate isomerase 474437 11053280 Murru_0470 Muricauda ruestringensis DSM 13258 triosephosphate isomerase YP_004786946.1 473688 R 886377 CDS YP_004786947.1 344201804 11053281 complement(474623..475762) 1 NC_015945.1 PFAM: DoxX; InterPro IPR011637; KEGG: fbc:FB2170_01637 hypothetical protein; PFAM: Uncharacterised protein family YphA; SPTR: Putative uncharacterized protein; DoxX family protein 475762 11053281 Murru_0471 Muricauda ruestringensis DSM 13258 DoxX family protein YP_004786947.1 474623 R 886377 CDS YP_004786948.1 344201805 11053282 complement(475932..476477) 1 NC_015945.1 PFAM: Domain of Unknown Function (DUF1599); InterPro IPR011630; KEGG: fbc:FB2170_01642 hypothetical protein; PFAM: Domain of unknown function DUF1599; SPTR: Putative uncharacterized protein; hypothetical protein 476477 11053282 Murru_0472 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786948.1 475932 R 886377 CDS YP_004786949.1 344201806 11053283 476573..477406 1 NC_015945.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase; COGs: COG0294 Dihydropteroate synthase; InterPro IPR006390:IPR000489; KEGG: fps:FP1425 dihydropteroate synthase; PFAM: Pterin-binding; PRIAM: Dihydropteroate synthase; SPTR: Dihydropteroate synthase; TIGRFAM: Dihydropteroate synthase; manually curated; dihydropteroate synthase 477406 11053283 Murru_0473 Muricauda ruestringensis DSM 13258 dihydropteroate synthase YP_004786949.1 476573 D 886377 CDS YP_004786950.1 344201807 11053284 477451..478239 1 NC_015945.1 PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: TIGR00159 family protein; COGs: COG1624 conserved hypothetical protein; InterPro IPR014046:IPR003390; KEGG: fbc:FB2170_01652 hypothetical protein; PFAM: DNA integrity scanning protein, DisA, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00159; hypothetical protein 478239 11053284 Murru_0474 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786950.1 477451 D 886377 CDS YP_004786951.1 344201808 11053285 478560..480464 1 NC_015945.1 KEGG: lby:Lbys_2407 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 480464 11053285 Murru_0475 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786951.1 478560 D 886377 CDS YP_004786952.1 344201809 11053286 480472..480903 1 NC_015945.1 hypothetical protein 480903 11053286 Murru_0476 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786952.1 480472 D 886377 CDS YP_004786953.1 344201810 11053287 480919..481326 1 NC_015945.1 hypothetical protein 481326 11053287 Murru_0477 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786953.1 480919 D 886377 CDS YP_004786954.1 344201811 11053288 complement(481348..483120) 1 NC_015945.1 PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: fbc:FB2170_01657 ATPase; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ATPase; xenobiotic-transporting ATPase 483120 11053288 Murru_0478 Muricauda ruestringensis DSM 13258 xenobiotic-transporting ATPase YP_004786954.1 481348 R 886377 CDS YP_004786955.1 344201812 11053289 complement(483104..483868) 1 NC_015945.1 PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; COGs: COG0101 Pseudouridylate synthase; HAMAP: Pseudouridine synthase I, TruA; InterPro IPR001406:IPR020097; KEGG: gfo:GFO_0425 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; SPTR: tRNA pseudouridine synthase A 1; TIGRFAM: Pseudouridine synthase I, TruA; tRNA pseudouridine synthase A 483868 11053289 Murru_0479 Muricauda ruestringensis DSM 13258 tRNA pseudouridine synthase A YP_004786955.1 483104 R 886377 CDS YP_004786956.1 344201813 11053290 483948..484442 1 NC_015945.1 TIGRFAM: phosphoesterase, MJ0936 family; COGs: COG0622 phosphoesterase; InterPro IPR000979:IPR004843; KEGG: fbc:FB2170_01667 hypothetical protein; PFAM: Metallo-dependent phosphatase; SPTR: Putative uncharacterized protein; TIGRFAM: Phosphodiesterase MJ0936; phosphodiesterase 484442 11053290 Murru_0480 Muricauda ruestringensis DSM 13258 phosphodiesterase YP_004786956.1 483948 D 886377 CDS YP_004786957.1 344201814 11053291 complement(484509..484919) 1 NC_015945.1 KEGG: fbc:FB2170_01672 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 484919 11053291 Murru_0481 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786957.1 484509 R 886377 CDS YP_004786958.1 344201815 11053292 485111..486730 1 NC_015945.1 PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho; COGs: COG1158 Transcription termination factor; InterProIPR011112:IPR011129:IPR003593:IPR004665:IPR 011113:IPR000194; KEGG: fbc:FB2170_01677 transcription termination factor Rho; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, RNA-binding; Rho termination factor, N-terminal; SMART: Cold shock protein; Rho termination factor, N-terminal; ATPase, AAA+ type, core; SPTR: Transcription termination factor Rho; TIGRFAM: Transcription termination factor Rho; transcription termination factor Rho 486730 11053292 Murru_0482 Muricauda ruestringensis DSM 13258 transcription termination factor Rho YP_004786958.1 485111 D 886377 CDS YP_004786959.1 344201816 11053293 486861..487502 1 NC_015945.1 KEGG: fbc:FB2170_01682 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 487502 11053293 Murru_0483 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786959.1 486861 D 886377 CDS YP_004786960.1 344201817 11053294 487509..488198 1 NC_015945.1 KEGG: fbc:FB2170_01687 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 488198 11053294 Murru_0484 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786960.1 487509 D 886377 CDS YP_004786961.1 344201818 11053295 488292..488978 1 NC_015945.1 KEGG: fbc:FB2170_01692 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 488978 11053295 Murru_0485 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786961.1 488292 D 886377 CDS YP_004786962.1 344201819 11053296 complement(489041..489292) 1 NC_015945.1 PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20; HAMAP: Ribosomal protein S20; InterPro IPR002583; KEGG: rbi:RB2501_10542 30S ribosomal protein S20; PFAM: Ribosomal protein S20; SPTR: 30S ribosomal protein S20; TIGRFAM: Ribosomal protein S20; 30S ribosomal protein S20 489292 11053296 Murru_0486 Muricauda ruestringensis DSM 13258 30S ribosomal protein S20 YP_004786962.1 489041 R 886377 CDS YP_004786963.1 344201820 11053299 complement(489626..491101) 1 NC_015945.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); Prolyl-tRNA synthetase, C-terminal; TIGRFAM: prolyl-tRNA synthetase, family I; COGs: COG0442 Prolyl-tRNA synthetase; HAMAP: Prolyl-tRNA synthetase, class IIa, eukaryotic-type; InterPro IPR016061:IPR004499:IPR002314:IPR004154; KEGG: fbc:FB2170_01706 prolyl-tRNA synthetase; PFAM: Prolyl-tRNA synthetase, class II, C-terminal; Anticodon-binding; Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; PRIAM: Proline--tRNA ligase; SMART: Prolyl-tRNA synthetase, class II, C-terminal; SPTR: Prolyl-tRNA synthetase; TIGRFAM: Prolyl-tRNA synthetase, class IIa, eukaryotic-type; prolyl-tRNA synthetase 491101 11053299 Murru_0487 Muricauda ruestringensis DSM 13258 prolyl-tRNA synthetase YP_004786963.1 489626 R 886377 CDS YP_004786964.1 344201821 11053300 491196..492488 1 NC_015945.1 KEGG: rbi:RB2501_10527 prolyl-tRNA synthetase; SPTR: Prolyl-tRNA synthetase; prolyl-tRNA synthetase 492488 11053300 Murru_0488 Muricauda ruestringensis DSM 13258 prolyl-tRNA synthetase YP_004786964.1 491196 D 886377 CDS YP_004786965.1 344201822 11053301 492525..494027 1 NC_015945.1 PFAM: Uncharacterised protein family (UPF0164); Outer membrane protein transport protein (OMPP1/FadL/TodX); InterPro IPR005017; KEGG: fbc:FB2170_01726 hypothetical protein; PFAM: Membrane protein, aromatic hydrocarbon degradation; SPTR: Putative uncharacterized protein; aromatic hydrocarbon degradation membrane protein 494027 11053301 Murru_0489 Muricauda ruestringensis DSM 13258 aromatic hydrocarbon degradation membrane protein YP_004786965.1 492525 D 886377 CDS YP_004786966.1 344201823 11053302 complement(494079..495518) 1 NC_015945.1 KEGG: rbi:RB2501_10517 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 495518 11053302 Murru_0490 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786966.1 494079 R 886377 CDS YP_004786967.1 344201824 11053303 complement(495633..497435) 1 NC_015945.1 KEGG: fbc:FB2170_01736 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 497435 11053303 Murru_0491 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786967.1 495633 R 886377 CDS YP_004786968.1 344201825 11053304 497569..498249 1 NC_015945.1 PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; COGs: COG0302 GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; InterPro IPR001474:IPR020602; KEGG: fbc:FB2170_01741 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: GTP cyclohydrolase I; SPTR: GTP cyclohydrolase 1 2; TIGRFAM: GTP cyclohydrolase I; GTP cyclohydrolase 1 498249 11053304 Murru_0492 Muricauda ruestringensis DSM 13258 GTP cyclohydrolase 1 YP_004786968.1 497569 D 886377 CDS YP_004786969.1 344201826 11053305 498265..499746 1 NC_015945.1 PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; COGs: COG0215 Cysteinyl-tRNA synthetase; InterPro IPR015273:IPR015803; KEGG: fbc:FB2170_01746 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia; Cysteinyl-tRNA synthetase, class Ia, DALR; PRIAM: Cysteine--tRNA ligase; SMART: Cysteinyl-tRNA synthetase, class Ia, DALR; SPTR: Cysteinyl-tRNA synthetase; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; cysteinyl-tRNA synthetase 499746 11053305 Murru_0493 Muricauda ruestringensis DSM 13258 cysteinyl-tRNA synthetase YP_004786969.1 498265 D 886377 CDS YP_004786970.1 344201827 11053306 499800..500021 1 NC_015945.1 PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD; COGs: COG0759 conserved hypothetical protein; HAMAP: Protein of unknown function DUF37; InterPro IPR002696; KEGG: fbc:FB2170_01751 hypothetical protein; PFAM: Protein of unknown function DUF37; SPTR: UPF0161 protein FB2170_01751; TIGRFAM: Protein of unknown function DUF37; hypothetical protein 500021 11053306 Murru_0494 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786970.1 499800 D 886377 CDS YP_004786971.1 344201828 11053307 500089..501051 1 NC_015945.1 PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; COGs: COG0682 Prolipoprotein diacylglyceryltransferase; HAMAP: Prolipoprotein diacylglyceryl transferase; InterPro IPR001640; KEGG: fbc:FB2170_01756 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; SPTR: Prolipoprotein diacylglyceryl transferase; TIGRFAM: Prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 501051 11053307 Murru_0495 Muricauda ruestringensis DSM 13258 prolipoprotein diacylglyceryl transferase YP_004786971.1 500089 D 886377 CDS YP_004786972.1 344201829 11053308 501053..501541 1 NC_015945.1 PFAM: Uncharacterized ACR, COG1430; COGs: COG1430 conserved hypothetical protein; InterPro IPR003795; KEGG: fbc:FB2170_01761 hypothetical protein; PFAM: Protein of unknown function DUF192; SPTR: Putative uncharacterized protein; hypothetical protein 501541 11053308 Murru_0496 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786972.1 501053 D 886377 CDS YP_004786973.1 344201830 11053309 501542..502075 1 NC_015945.1 COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: fbc:FB2170_01766 YkkB; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: YkkB; N-acetyltransferase GCN5 502075 11053309 Murru_0497 Muricauda ruestringensis DSM 13258 N-acetyltransferase GCN5 YP_004786973.1 501542 D 886377 CDS YP_004786974.1 344201831 11053310 502107..503357 1 NC_015945.1 PFAM: ABC transporter; COGs: COG1119 ABC-type molybdenum transport system ATPase component/photorepair protein PhrA; InterPro IPR003593:IPR003439; KEGG: rbi:RB2501_10482 putative anion transport protein (ABC superfamily, ATP-binding protein); PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative anion transport protein (ABC superfamily, ATP-binding protein); ABC transporter-like protein 503357 11053310 Murru_0498 Muricauda ruestringensis DSM 13258 ABC transporter-like protein YP_004786974.1 502107 D 886377 CDS YP_004786975.1 344201832 11053311 503859..505322 1 NC_015945.1 PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: rbi:RB2501_12587 hypothetical protein; PFAM: Glycosyl transferase, group 1; SPTR: Putative uncharacterized protein; group 1 glycosyl transferase 505322 11053311 Murru_0499 Muricauda ruestringensis DSM 13258 group 1 glycosyl transferase YP_004786975.1 503859 D 886377 CDS YP_004786976.1 344201833 11053312 complement(505390..508356) 1 NC_015945.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; COGs: COG0342 Preprotein translocase subunit SecD; InterProIPR005791:IPR022645:IPR005665:IPR022646:IPR 022813; KEGG: fbc:FB2170_01786 putative protein-export transmembrane SecDF protein; PFAM: Preprotein translocase, SecD/SecF/SecDF; SecD/SecF/SecDF export membrane protein, GG motif, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein, bacteria; SecF protein; protein-export membrane protein SecD 508356 11053312 Murru_0500 Muricauda ruestringensis DSM 13258 protein-export membrane protein SecD YP_004786976.1 505390 R 886377 CDS YP_004786977.1 344201834 11053313 complement(508581..509507) 1 NC_015945.1 PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase, NAD-dependent; COGs: COG0039 Malate/lactate dehydrogenase; HAMAP: Malate dehydrogenase, NAD-dependent; InterPro IPR011275:IPR001236:IPR022383; KEGG: fbc:FB2170_01791 putative malate dehydrogenase; PFAM: Lactate/malate dehydrogenase, N-terminal; Lactate/malate dehydrogenase, C-terminal; PRIAM: L-lactate dehydrogenase; SPTR: Malate dehydrogenase; malate dehydrogenase 509507 11053313 Murru_0501 Muricauda ruestringensis DSM 13258 malate dehydrogenase YP_004786977.1 508581 R 886377 CDS YP_004786978.1 344201835 11053314 509754..510125 1 NC_015945.1 KEGG: fbc:FB2170_01796 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 510125 11053314 Murru_0502 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786978.1 509754 D 886377 CDS YP_004786979.1 344201836 11053315 complement(510203..511213) 1 NC_015945.1 KEGG: fbc:FB2170_01801 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 511213 11053315 Murru_0503 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786979.1 510203 R 886377 CDS YP_004786980.1 344201837 11053316 complement(511286..513226) 1 NC_015945.1 PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit; COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR003594:IPR001241:IPR011557:IPR013506:IPR 006171:IPR002288; KEGG: fbc:FB2170_01806 DNA gyrase subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, domain 2; ATPase-like, ATP-binding domain; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit B/N-terminal; ATPase-like, ATP-binding domain; SPTR: DNA gyrase subunit B; TIGRFAM: DNA gyrase, subunit B; DNA gyrase subunit B 513226 11053316 Murru_0504 Muricauda ruestringensis DSM 13258 DNA gyrase subunit B YP_004786980.1 511286 R 886377 CDS YP_004786981.1 344201838 11053317 complement(513483..515153) 1 NC_015945.1 PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR006426:IPR000583:IPR001962; KEGG: fbc:FB2170_01811 asparagine synthetase B; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II; PRIAM: Asparagine synthase (glutamine-hydrolyzing); SPTR: Asparagine synthetase B; TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; asparagine synthase 515153 11053317 Murru_0505 Muricauda ruestringensis DSM 13258 asparagine synthase YP_004786981.1 513483 R 886377 CDS YP_004786982.1 344201839 11053318 515393..515926 1 NC_015945.1 PFAM: Protein of unknown function (DUF2911); KEGG: fbc:FB2170_01816 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 515926 11053318 Murru_0506 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786982.1 515393 D 886377 CDS YP_004786983.1 344201840 11053319 complement(516016..517635) 1 NC_015945.1 PFAM: Amidohydrolase family; COGs: COG1574 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR013108; KEGG: cat:CA2559_09378 predicted metal-dependent amidohydrolase with the TIM-barrel fold; PFAM: Amidohydrolase 3; SPTR: Predicted metal-dependent amidohydrolase with the TIM-barrel fold; amidohydrolase 517635 11053319 Murru_0507 Muricauda ruestringensis DSM 13258 amidohydrolase YP_004786983.1 516016 R 886377 CDS YP_004786984.1 344201841 11053320 complement(517717..519462) 1 NC_015945.1 KEGG: fbc:FB2170_01876 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 519462 11053320 Murru_0508 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786984.1 517717 R 886377 CDS YP_004786985.1 344201842 11053321 complement(519475..522498) 1 NC_015945.1 PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440; KEGG: fbc:FB2170_01881 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein; hypothetical protein 522498 11053321 Murru_0509 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786985.1 519475 R 886377 CDS YP_004786986.1 344201843 11053322 522811..523356 1 NC_015945.1 PFAM: LemA family; COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: opr:Ocepr_0058 LemA family protein; PFAM: LemA; SPTR: LemA protein; LemA family protein 523356 11053322 Murru_0510 Muricauda ruestringensis DSM 13258 LemA family protein YP_004786986.1 522811 D 886377 CDS YP_004786987.1 344201844 11053323 523372..524475 1 NC_015945.1 PFAM: Protein of unknown function (DUF3137); KEGG: mtt:Ftrac_0043 galanin; SPTR: Putative uncharacterized protein; hypothetical protein 524475 11053323 Murru_0511 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786987.1 523372 D 886377 CDS YP_004786988.1 344201845 11053324 524569..525252 1 NC_015945.1 PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; COGs: COG2884 ATPase involved in cell division; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_01886 cell division ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Cell division ATP-binding protein; phosphonate-transporting ATPase 525252 11053324 Murru_0512 Muricauda ruestringensis DSM 13258 phosphonate-transporting ATPase YP_004786988.1 524569 D 886377 CDS YP_004786989.1 344201846 11053325 525350..526108 1 NC_015945.1 PFAM: ROK family; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: rbi:RB2501_10397 ROK family protein; PFAM: ROK; PRIAM: Polyphosphate--glucose phosphotransferase; SPTR: ROK family protein; polyphosphate--glucose phosphotransferase 526108 11053325 Murru_0513 Muricauda ruestringensis DSM 13258 polyphosphate--glucose phosphotransferase YP_004786989.1 525350 D 886377 CDS YP_004786990.1 344201847 11053326 complement(526321..528120) 1 NC_015945.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain; COGs: COG1217 membrane GTPase involved in stress response; InterProIPR000640:IPR005225:IPR006298:IPR000795:IPR 004161; KEGG: zpr:ZPR_3619 GTP-binding protein TypA; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SMART: Translation elongation factor EFG/EF2, C-terminal; SPTR: GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; GTP-binding protein TypA 528120 11053326 Murru_0514 Muricauda ruestringensis DSM 13258 GTP-binding protein TypA YP_004786990.1 526321 R 886377 CDS YP_004786991.1 344201848 11053327 complement(528220..528759) 1 NC_015945.1 KEGG: gfo:GFO_2811 secreted protein; SPTR: Secreted protein; hypothetical protein 528759 11053327 Murru_0515 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786991.1 528220 R 886377 CDS YP_004786992.1 344201849 11053328 complement(528814..529371) 1 NC_015945.1 KEGG: gfo:GFO_2811 secreted protein; SPTR: Putative uncharacterized protein; hypothetical protein 529371 11053328 Murru_0516 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786992.1 528814 R 886377 CDS YP_004786993.1 344201850 11053329 complement(529437..530018) 1 NC_015945.1 KEGG: gfo:GFO_2811 secreted protein; SPTR: Putative uncharacterized protein; hypothetical protein 530018 11053329 Murru_0517 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786993.1 529437 R 886377 CDS YP_004786994.1 344201851 11053330 530092..530910 1 NC_015945.1 PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; COGs: COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; InterPro IPR006269:IPR006218; KEGG: rbi:RB2501_10387 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-8-phosphooctulonate synthase; SPTR: 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; 2-dehydro-3-deoxyphosphooctonate aldolase 530910 11053330 Murru_0518 Muricauda ruestringensis DSM 13258 2-dehydro-3-deoxyphosphooctonate aldolase YP_004786994.1 530092 D 886377 CDS YP_004786995.1 344201852 11053331 531075..533537 1 NC_015945.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; PEGA domain; COGs: COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; InterPro IPR010105:IPR013229:IPR012910:IPR000531; KEGG: gfo:GFO_2191 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; PEGA; SPTR: Ferrichrome-iron receptor; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 533537 11053331 Murru_0519 Muricauda ruestringensis DSM 13258 TonB-dependent siderophore receptor YP_004786995.1 531075 D 886377 CDS YP_004786996.1 344201853 11053332 533548..534264 1 NC_015945.1 PFAM: Nickel uptake substrate-specific transmembrane region; InterPro IPR019613; KEGG: zpr:ZPR_2531 polyferredoxin-like protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: Polyferredoxin-like protein; nickel transport complex transmembrane protein NikM 534264 11053332 Murru_0520 Muricauda ruestringensis DSM 13258 nickel transport complex transmembrane protein NikM YP_004786996.1 533548 D 886377 CDS YP_004786997.1 344201854 11053333 534268..534600 1 NC_015945.1 KEGG: fjo:Fjoh_1254 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 534600 11053333 Murru_0521 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786997.1 534268 D 886377 CDS YP_004786998.1 344201855 11053334 534604..534903 1 NC_015945.1 KEGG: fjo:Fjoh_1253 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 534903 11053334 Murru_0522 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004786998.1 534604 D 886377 CDS YP_004786999.1 344201856 11053335 534908..536479 1 NC_015945.1 COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625; KEGG: fjo:Fjoh_1252 PepSY-associated TM helix domain-containing protein; PFAM: PepSY-associated TM helix; SPTR: Membrane protein, putative; PepSY-associated TM helix domain-containing protein 536479 11053335 Murru_0523 Muricauda ruestringensis DSM 13258 PepSY-associated TM helix domain-containing protein YP_004786999.1 534908 D 886377 CDS YP_004787000.1 344201857 11053336 complement(536476..536844) 1 NC_015945.1 PFAM: Domain of unknown function (DU1801); InterPro IPR014922; KEGG: rbi:RB2501_10382 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: Protein of unknown function DUF1801; SPTR: Putative uncharacterized protein; hypothetical protein 536844 11053336 Murru_0524 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787000.1 536476 R 886377 CDS YP_004787001.1 344201858 11053337 complement(536867..537736) 1 NC_015945.1 PFAM: Protein of unknown function (DUF808); COGs: COG2354 conserved hypothetical protein; InterPro IPR008526; KEGG: gfo:GFO_2648 hypothetical protein; PFAM: Protein of unknown function DUF808; SPTR: Conserved hypothetical transmembrane protein; hypothetical protein 537736 11053337 Murru_0525 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787001.1 536867 R 886377 CDS YP_004787002.1 344201859 11053338 complement(537836..538294) 1 NC_015945.1 PFAM: Putative small multi-drug export protein; COGs: COG2426 membrane protein; InterPro IPR009577; KEGG: fbc:FB2170_06600 putative small multidrug export protein; PFAM: Putative small multi-drug export; SPTR: Putative small multidrug export protein; small multi-drug export protein 538294 11053338 Murru_0526 Muricauda ruestringensis DSM 13258 small multi-drug export protein YP_004787002.1 537836 R 886377 CDS YP_004787003.1 344201860 11053339 538509..539624 1 NC_015945.1 PFAM: PHP domain; InterPro IPR004013; KEGG: rbi:RB2501_10377 hypothetical protein; PFAM: PHP, C-terminal; SPTR: Putative uncharacterized protein; PHP domain-containing protein 539624 11053339 Murru_0527 Muricauda ruestringensis DSM 13258 PHP domain-containing protein YP_004787003.1 538509 D 886377 CDS YP_004787004.1 344201861 11053340 complement(539626..539895) 1 NC_015945.1 hypothetical protein 539895 11053340 Murru_0528 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787004.1 539626 R 886377 CDS YP_004787005.1 344201862 11053341 complement(539976..541181) 1 NC_015945.1 PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; COGs: COG0686 Alanine dehydrogenase; InterPro IPR007886; KEGG: fbc:FB2170_01970 hypothetical protein; PFAM: Alanine dehydrogenase/PNT, N-terminal; PRIAM: Saccharopine dehydrogenase (NADP(+), L-lysine-forming); SPTR: Putative uncharacterized protein; tmRNA as predicted by Rfam (RF00023), score 156.25; saccharopine dehydrogenase 541181 11053341 Murru_R0006 Muricauda ruestringensis DSM 13258 saccharopine dehydrogenase YP_004787005.1 539976 R 886377 CDS YP_004787006.1 344201863 11053343 543560..543676 1 NC_015945.1 hypothetical protein 543676 11053343 Murru_0531 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787006.1 543560 D 886377 CDS YP_004787007.1 344201864 11053346 complement(546027..547418) 1 NC_015945.1 KEGG: psp:PSPPH_4348 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 547418 11053346 Murru_0534 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787007.1 546027 R 886377 CDS YP_004787008.1 344201865 11053347 complement(547435..549204) 1 NC_015945.1 KEGG: pat:Patl_1033 endonuclease I; SPTR: Extracellular nuclease; hypothetical protein 549204 11053347 Murru_0535 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787008.1 547435 R 886377 CDS YP_004787009.1 344201866 11053348 complement(549225..550709) 1 NC_015945.1 PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: zpr:ZPR_4168 sodium:sulfate symporter; PFAM: Sodium/sulphate symporter; SPTR: Sodium-dependent transporter; TIGRFAM: Sodium/sulphate symporter; anion transporter 550709 11053348 Murru_0536 Muricauda ruestringensis DSM 13258 anion transporter YP_004787009.1 549225 R 886377 CDS YP_004787010.1 344201867 11053349 complement(550706..551488) 1 NC_015945.1 KEGG: amu:Amuc_1270 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 551488 11053349 Murru_0537 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787010.1 550706 R 886377 CDS YP_004787011.1 344201868 11053350 complement(551513..552931) 1 NC_015945.1 PFAM: SusD family; KEGG: dfe:Dfer_1701 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 552931 11053350 Murru_0538 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787011.1 551513 R 886377 CDS YP_004787012.1 344201869 11053351 complement(552949..556200) 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1702 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein probably involved in nutrient binding; TonB-dependent receptor plug 556200 11053351 Murru_0539 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004787012.1 552949 R 886377 CDS YP_004787013.1 344201870 11053352 556370..557530 1 NC_015945.1 KEGG: zpr:ZPR_0363 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 557530 11053352 Murru_0540 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787013.1 556370 D 886377 CDS YP_004787014.1 344201871 11053353 complement(557540..559156) 1 NC_015945.1 PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); COGs: COG1866 Phosphoenolpyruvate carboxykinase (ATP); HAMAP: Phosphoenolpyruvate carboxykinase, ATP-utilising; InterPro IPR001272; KEGG: fbc:FB2170_07734 phosphoenolpyruvate carboxykinase; PFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; SPTR: Phosphoenolpyruvate carboxykinase [ATP] 1; TIGRFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; phosphoenolpyruvate carboxykinase 559156 11053353 Murru_0541 Muricauda ruestringensis DSM 13258 phosphoenolpyruvate carboxykinase YP_004787014.1 557540 R 886377 CDS YP_004787015.1 344201872 11053354 complement(559253..559468) 1 NC_015945.1 hypothetical protein 559468 11053354 Murru_0542 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787015.1 559253 R 886377 CDS YP_004787016.1 344201873 11053355 complement(559850..561913) 1 NC_015945.1 PFAM: F5/8 type C domain; Alpha-L-fucosidase; COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933:IPR000421; KEGG: fbc:FB2170_02090 putative lipoprotein; PFAM: Coagulation factor 5/8 type, C-terminal; Glycoside hydrolase, family 29; PRIAM: Alpha-L-fucosidase; SMART: Glycoside hydrolase, family 29; SPTR: Putative lipoprotein; alpha-L-fucosidase 561913 11053355 Murru_0543 Muricauda ruestringensis DSM 13258 alpha-L-fucosidase YP_004787016.1 559850 R 886377 CDS YP_004787017.1 344201874 11053356 complement(561996..562697) 1 NC_015945.1 PFAM: LrgB-like family; TIGRFAM: TIGR00659 family protein; COGs: COG1346 Putative effector of murein hydrolase; InterPro IPR007300; KEGG: zpr:ZPR_4311 LrgB-like family protein; PFAM: LrgB-like protein; SPTR: LrgB-like family protein; LrgB family protein 562697 11053356 Murru_0544 Muricauda ruestringensis DSM 13258 LrgB family protein YP_004787017.1 561996 R 886377 CDS YP_004787018.1 344201875 11053357 complement(562694..563026) 1 NC_015945.1 PFAM: LrgA family; COGs: COG1380 Putative effector of murein hydrolase LrgA; InterPro IPR005538; KEGG: zpr:ZPR_4312 putative transmembrane protein; PFAM: Uncharacterised protein family LrgA/YohJ; SPTR: Putative transmembrane protein; LrgA family protein 563026 11053357 Murru_0545 Muricauda ruestringensis DSM 13258 LrgA family protein YP_004787018.1 562694 R 886377 CDS YP_004787019.1 344201876 11053358 complement(563213..565813) 1 NC_015945.1 PFAM: Kelch motif; Sodium:solute symporter family; TIGRFAM: transporter, SSS family; cyclically-permuted mutatrotase family protein; COGs: COG0591 Na+/proline symporter; InterPro IPR006652:IPR019900:IPR001734; KEGG: fbc:FB2170_03920 hypothetical protein; PFAM: Sodium/solute symporter; Kelch repeat type 1; SMART: Kelch repeat type 1; SPTR: Putative uncharacterized protein; TIGRFAM: Sodium/solute symporter, subgroup; SSS sodium solute transporter superfamily protein 565813 11053358 Murru_0546 Muricauda ruestringensis DSM 13258 SSS sodium solute transporter superfamily protein YP_004787019.1 563213 R 886377 CDS YP_004787020.1 344201877 11053359 complement(565803..567890) 1 NC_015945.1 PFAM: Glycosyl hydrolase family 20, catalytic domain; Glycosyl hydrolase family 20, domain 2; COGs: COG3525 N-acetyl-beta-hexosaminidase; InterPro IPR015882:IPR015883; KEGG: amu:Amuc_1815 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Acetylhexosaminidase, subunit a/b; SPTR: Beta-N-acetylhexosaminidase; glycoside hydrolase 567890 11053359 Murru_0547 Muricauda ruestringensis DSM 13258 glycoside hydrolase YP_004787020.1 565803 R 886377 CDS YP_004787021.1 344201878 11053360 complement(567897..569495) 1 NC_015945.1 PFAM: BNR/Asp-box repeat; COGs: COG4409 Neuraminidase (sialidase); KEGG: coc:Coch_0016 exo-alpha-sialidase; SPTR: SiaC; exo-alpha-sialidase 569495 11053360 Murru_0548 Muricauda ruestringensis DSM 13258 exo-alpha-sialidase YP_004787021.1 567897 R 886377 CDS YP_004787022.1 344201879 11053361 complement(569495..570661) 1 NC_015945.1 PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); COGs: COG2942 N-acyl-D-glucosamine 2-epimerase; InterPro IPR010819; KEGG: fbc:FB2170_03930 N-acyl-D-glucosamine 2-epimerase; PFAM: N-acylglucosamine 2-epimerase; PRIAM: N-acylglucosamine 2-epimerase; SPTR: N-acyl-D-glucosamine 2-epimerase; N-acylglucosamine 2-epimerase 570661 11053361 Murru_0549 Muricauda ruestringensis DSM 13258 N-acylglucosamine 2-epimerase YP_004787022.1 569495 R 886377 CDS YP_004787023.1 344201880 11053362 570790..571518 1 NC_015945.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG2186 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: phe:Phep_3580 GntR domain protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; SPTR: Putative GntR family regulatory protein; GntR family transcriptional regulator 571518 11053362 Murru_0550 Muricauda ruestringensis DSM 13258 GntR family transcriptional regulator YP_004787023.1 570790 D 886377 CDS YP_004787024.1 344201881 11053363 complement(571818..573320) 1 NC_015945.1 PFAM: SusD family; InterPro IPR012944; KEGG: sli:Slin_2626 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 573320 11053363 Murru_0551 Muricauda ruestringensis DSM 13258 RagB/SusD domain-containing protein YP_004787024.1 571818 R 886377 CDS YP_004787025.1 344201882 11053364 complement(573331..576636) 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: pdi:BDI_2944 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein probably involved in nutrient binding; TonB-dependent receptor plug 576636 11053364 Murru_0552 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004787025.1 573331 R 886377 CDS YP_004787026.1 344201883 11053365 complement(576724..577647) 1 NC_015945.1 PFAM: Dihydrodipicolinate synthetase family; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220; KEGG: fbc:FB2170_03935 putative N-acetylneuraminate lyase (sialic acid lyase); PFAM: Dihydrodipicolinate synthetase; PRIAM: N-acetylneuraminate lyase; SPTR: Putative N-acetylneuraminate lyase (Sialic acid lyase); N-acetylneuraminate lyase 577647 11053365 Murru_0553 Muricauda ruestringensis DSM 13258 N-acetylneuraminate lyase YP_004787026.1 576724 R 886377 CDS YP_004787027.1 344201884 11053366 578008..578685 1 NC_015945.1 PFAM: HPP family; COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR007065; KEGG: chu:CHU_1999 CBS domain-containing protein; PFAM: HPP; SPTR: CBS-domain-containing membrane protein; HPP family protein 578685 11053366 Murru_0554 Muricauda ruestringensis DSM 13258 HPP family protein YP_004787027.1 578008 D 886377 CDS YP_004787028.1 344201885 11053367 complement(578945..580768) 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; InterPro IPR019734:IPR018060:IPR001440:IPR000005; KEGG: fba:FIC_01251 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; Tetratricopeptide TPR-1; SMART: Helix-turn-helix, AraC type, DNA binding domain; Tetratricopeptide repeat; SPTR: TPR-repeat-containing protein; AraC type helix-turn-helix domain-containing protein 580768 11053367 Murru_0555 Muricauda ruestringensis DSM 13258 AraC type helix-turn-helix domain-containing protein YP_004787028.1 578945 R 886377 CDS YP_004787029.1 344201886 11053368 complement(581319..584675) 1 NC_015945.1 PFAM: ASPIC and UnbV; FG-GAP repeat; InterPro IPR013517:IPR011519; KEGG: dfe:Dfer_4948 ASPIC/UnbV domain protein; PFAM: ASPIC/UnbV; FG-GAP; SPTR: Putative uncharacterized protein; ASPIC/UnbV domain-containing protein 584675 11053368 Murru_0556 Muricauda ruestringensis DSM 13258 ASPIC/UnbV domain-containing protein YP_004787029.1 581319 R 886377 CDS YP_004787030.1 344201887 11053369 complement(584808..586562) 1 NC_015945.1 PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_4950 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 586562 11053369 Murru_0557 Muricauda ruestringensis DSM 13258 RagB/SusD domain-containing protein YP_004787030.1 584808 R 886377 CDS YP_004787031.1 344201888 11053370 complement(586585..589791) 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_4949 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug 589791 11053370 Murru_0558 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004787031.1 586585 R 886377 CDS YP_004787032.1 344201889 11053371 complement(590041..590748) 1 NC_015945.1 KEGG: fbc:FB2170_14763 Tat (twin-arginine translocation) pathway signal sequence domain-containing protein; SPTR: Tat (Twin-arginine translocation) pathway signal sequence domain protein; Tat (twin-arginine translocation) pathway signal sequence domain-containing protein 590748 11053371 Murru_0559 Muricauda ruestringensis DSM 13258 Tat (twin-arginine translocation) pathway signal sequence domain-containing protein YP_004787032.1 590041 R 886377 CDS YP_004787033.1 344201890 11053372 complement(590753..592474) 1 NC_015945.1 PFAM: FAD binding domain; GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR003953; KEGG: fbc:FB2170_14768 GMC oxidoreductase family protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: GMC oxidoreductase family protein; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 592474 11053372 Murru_0560 Muricauda ruestringensis DSM 13258 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_004787033.1 590753 R 886377 CDS YP_004787034.1 344201891 11053373 complement(592616..593740) 1 NC_015945.1 KEGG: fbc:FB2170_04745 putative C-type cytochrome; SPTR: Probable c-type cytochrome; putative C-type cytochrome 593740 11053373 Murru_0561 Muricauda ruestringensis DSM 13258 putative C-type cytochrome YP_004787034.1 592616 R 886377 CDS YP_004787035.1 344201892 11053374 593953..594048 1 NC_015945.1 hypothetical protein 594048 11053374 Murru_0562 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787035.1 593953 D 886377 CDS YP_004787036.1 344201893 11053375 complement(594125..595018) 1 NC_015945.1 PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: fbc:FB2170_09396 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; hypothetical protein 595018 11053375 Murru_0563 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787036.1 594125 R 886377 CDS YP_004787037.1 344201894 11053376 595631..596785 1 NC_015945.1 PFAM: Galactokinase galactose-binding signature; GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: galactokinase; COGs: COG0153 Galactokinase; InterPro IPR000705:IPR019539:IPR006204:IPR013750; KEGG: fbc:FB2170_14568 galactokinase; PFAM: GHMP kinase; Galactokinase galactose-binding domain; GHMP kinase, C-terminal; PRIAM: Galactokinase; SPTR: Galactokinase; TIGRFAM: Galactokinase; galactokinase 596785 11053376 Murru_0564 Muricauda ruestringensis DSM 13258 galactokinase YP_004787037.1 595631 D 886377 CDS YP_004787038.1 344201895 11053377 complement(596856..600182) 1 NC_015945.1 PFAM: ASPIC and UnbV; FG-GAP repeat; InterPro IPR011519:IPR013517; KEGG: dfe:Dfer_4738 ASPIC/UnbV domain protein; PFAM: ASPIC/UnbV; FG-GAP; SPTR: ASPIC/UnbV domain protein; ASPIC/UnbV domain-containing protein 600182 11053377 Murru_0565 Muricauda ruestringensis DSM 13258 ASPIC/UnbV domain-containing protein YP_004787038.1 596856 R 886377 CDS YP_004787039.1 344201896 11053378 complement(600304..602181) 1 NC_015945.1 PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_0301 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 602181 11053378 Murru_0566 Muricauda ruestringensis DSM 13258 RagB/SusD domain-containing protein YP_004787039.1 600304 R 886377 CDS YP_004787040.1 344201897 11053379 complement(602192..605416) 1 NC_015945.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_0300 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug; TonB-dependent receptor 605416 11053379 Murru_0567 Muricauda ruestringensis DSM 13258 TonB-dependent receptor YP_004787040.1 602192 R 886377 CDS YP_004787041.1 344201898 11053380 605717..606733 1 NC_015945.1 PFAM: Bacterial regulatory proteins, gntR family; COGs: COG1609 Transcriptional regulators; InterPro IPR000524; KEGG: fbc:FB2170_04715 FucR; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: FucR; regulatory protein GntR HTH 606733 11053380 Murru_0568 Muricauda ruestringensis DSM 13258 regulatory protein GntR HTH YP_004787041.1 605717 D 886377 CDS YP_004787042.1 344201899 11053381 606777..609983 1 NC_015945.1 PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; Beta galactosidase small chain; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104:IPR006102:IPR006103:IPR004199; KEGG: zpr:ZPR_1388 beta-galactosidase; PFAM: Glycoside hydrolase, family 2, TIM barrel; Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; Glycoside hydrolase, family 42, domain 5; PRIAM: Beta-galactosidase; SPTR: Beta-galactosidase; beta-galactosidase 609983 11053381 Murru_0569 Muricauda ruestringensis DSM 13258 beta-galactosidase YP_004787042.1 606777 D 886377 CDS YP_004787043.1 344201900 11053382 610041..610973 1 NC_015945.1 PFAM: Xylose isomerase-like TIM barrel; COGs: COG3622 Hydroxypyruvate isomerase; InterPro IPR012307; KEGG: fbc:FB2170_04990 putative glyoxylate-induced protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Probable glyoxylate-induced protein; xylose isomerase domain-containing protein 610973 11053382 Murru_0570 Muricauda ruestringensis DSM 13258 xylose isomerase domain-containing protein YP_004787043.1 610041 D 886377 CDS YP_004787044.1 344201901 11053383 610989..611948 1 NC_015945.1 PFAM: Formylglycine-generating sulfatase enzyme; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: rbi:RB2501_00861 hypothetical protein; PFAM: Sulphatase-modifying factor; SPTR: Putative uncharacterized protein; sulfatase-modifying factor protein 611948 11053383 Murru_0571 Muricauda ruestringensis DSM 13258 sulfatase-modifying factor protein YP_004787044.1 610989 D 886377 CDS YP_004787045.1 344201902 11053384 611974..613305 1 NC_015945.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: rbi:RB2501_00856 putative oxidoreductase; PFAM: Oxidoreductase, N-terminal; SPTR: Probable oxidoreductase; oxidoreductase domain-containing protein 613305 11053384 Murru_0572 Muricauda ruestringensis DSM 13258 oxidoreductase domain-containing protein YP_004787045.1 611974 D 886377 CDS YP_004787046.1 344201903 11053385 613617..613748 1 NC_015945.1 hypothetical protein 613748 11053385 Murru_0573 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787046.1 613617 D 886377 CDS YP_004787047.1 344201904 11053386 complement(613705..614049) 1 NC_015945.1 hypothetical protein 614049 11053386 Murru_0574 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787047.1 613705 R 886377 CDS YP_004787048.1 344201905 11053387 614356..615330 1 NC_015945.1 PFAM: Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: gfo:GFO_1576 transmembrane family 2 fatty acid desaturase; PFAM: Fatty acid desaturase, type 1; PRIAM: Linoleoyl-CoA desaturase; SPTR: Transmembrane family 2 fatty acid desaturase; Linoleoyl-CoA desaturase 615330 11053387 Murru_0575 Muricauda ruestringensis DSM 13258 Linoleoyl-CoA desaturase YP_004787048.1 614356 D 886377 CDS YP_004787049.1 344201906 11053388 615337..616491 1 NC_015945.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001:IPR001650:IPR011545; KEGG: rde:RD1_3138 putative ATP-dependent RNA helicase, putative; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent RNA helicase RhlE; DEAD/DEAH box helicase 616491 11053388 Murru_0576 Muricauda ruestringensis DSM 13258 DEAD/DEAH box helicase YP_004787049.1 615337 D 886377 CDS YP_004787050.1 344201907 11053389 616519..616713 1 NC_015945.1 PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1278 Cold shock protein; InterPro IPR011129:IPR002059; KEGG: phe:Phep_0530 cold-shock protein DNA-binding; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Putative cold shock protein; cold-shock DNA-binding domain-containing protein 616713 11053389 Murru_0577 Muricauda ruestringensis DSM 13258 cold-shock DNA-binding domain-containing protein YP_004787050.1 616519 D 886377 CDS YP_004787051.1 344201908 11053390 616745..616939 1 NC_015945.1 PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1278 Cold shock protein; InterPro IPR011129:IPR002059; KEGG: gfo:GFO_1578 cold shock-like protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold shock-like protein; cold-shock DNA-binding domain-containing protein 616939 11053390 Murru_0578 Muricauda ruestringensis DSM 13258 cold-shock DNA-binding domain-containing protein YP_004787051.1 616745 D 886377 CDS YP_004787052.1 344201909 11053392 complement(617534..619138) 1 NC_015945.1 PFAM: Calcineurin-like phosphoesterase; COGs: COG1409 phosphohydrolase; InterPro IPR004843; KEGG: fbc:FB2170_06300 putative phosphohydrolase; PFAM: Metallo-dependent phosphatase; SPTR: Predicted phosphohydrolase; metallophosphoesterase 619138 11053392 Murru_0580 Muricauda ruestringensis DSM 13258 metallophosphoesterase YP_004787052.1 617534 R 886377 CDS YP_004787053.1 344201910 11053393 complement(619138..620508) 1 NC_015945.1 PFAM: Aminotransferase class-III; COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterPro IPR005814; KEGG: dfe:Dfer_3092 4-aminobutyrate aminotransferase; PFAM: Aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: 4-aminobutyrate aminotransferase; acetylornithine transaminase 620508 11053393 Murru_0581 Muricauda ruestringensis DSM 13258 acetylornithine transaminase YP_004787053.1 619138 R 886377 CDS YP_004787054.1 344201911 11053394 complement(620486..621754) 1 NC_015945.1 KEGG: dfe:Dfer_0342 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 621754 11053394 Murru_0582 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787054.1 620486 R 886377 CDS YP_004787055.1 344201912 11053395 complement(621757..623400) 1 NC_015945.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; PA14 domain; COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR011658:IPR002591; KEGG: dfe:Dfer_3093 PA14 domain protein; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SMART: PA14; SPTR: Putative uncharacterized protein; type I phosphodiesterase/nucleotide pyrophosphatase 623400 11053395 Murru_0583 Muricauda ruestringensis DSM 13258 type I phosphodiesterase/nucleotide pyrophosphatase YP_004787055.1 621757 R 886377 CDS YP_004787056.1 344201913 11053396 complement(623436..624890) 1 NC_015945.1 KEGG: sru:SRU_2860 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 624890 11053396 Murru_0584 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787056.1 623436 R 886377 CDS YP_004787057.1 344201914 11053397 complement(624910..628197) 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1098 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Outer membrane protein; TonB-dependent receptor plug 628197 11053397 Murru_0585 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004787057.1 624910 R 886377 CDS YP_004787058.1 344201915 11053398 628479..629045 1 NC_015945.1 PFAM: Cupin domain; Helix-turn-helix; InterPro IPR001387:IPR013096; KEGG: ppn:Palpr_0226 cupin 2 conserved barrel domain protein; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; helix-turn-helix domain-containing protein 629045 11053398 Murru_0586 Muricauda ruestringensis DSM 13258 helix-turn-helix domain-containing protein YP_004787058.1 628479 D 886377 CDS YP_004787059.1 344201916 11053399 complement(629046..629720) 1 NC_015945.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; phosphonatase-like hydrolase; COGs: COG0546 phosphatase; InterPro IPR006439:IPR005834; KEGG: rba:RB5862 phosphatase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Probable phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase 629720 11053399 Murru_0587 Muricauda ruestringensis DSM 13258 HAD-superfamily hydrolase YP_004787059.1 629046 R 886377 CDS YP_004787060.1 344201917 11053400 complement(629717..630889) 1 NC_015945.1 PFAM: FAD dependent oxidoreductase; TIGRFAM: FAD dependent oxidoreductase TIGR03364; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR017741:IPR006076; KEGG: rba:RB5861 putative oxidase; PFAM: FAD dependent oxidoreductase; SPTR: Putative uncharacterized protein; TIGRFAM: FAD-dependent oxidoreductase, HpnW; FAD dependent oxidoreductase 630889 11053400 Murru_0588 Muricauda ruestringensis DSM 13258 FAD dependent oxidoreductase YP_004787060.1 629717 R 886377 CDS YP_004787061.1 344201918 11053401 complement(630879..632159) 1 NC_015945.1 KEGG: ilo:IL2592 hypothetical protein; SPTR: Uncharacterized conserved membrane protein, probable transporter; hypothetical protein 632159 11053401 Murru_0589 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787061.1 630879 R 886377 CDS YP_004787062.1 344201919 11053402 complement(632423..632941) 1 NC_015945.1 hypothetical protein 632941 11053402 Murru_0590 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787062.1 632423 R 886377 CDS YP_004787063.1 344201920 11053403 complement(633409..634173) 1 NC_015945.1 PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: dfe:Dfer_3433 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; hypothetical protein 634173 11053403 Murru_0591 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787063.1 633409 R 886377 CDS YP_004787064.1 344201921 11053404 634337..634636 1 NC_015945.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR005746:IPR013766; KEGG: fbc:FB2170_14483 thioredoxin C-2; PFAM: Thioredoxin domain; SPTR: Thioredoxin C-2; TIGRFAM: Thioredoxin; thioredoxin 634636 11053404 Murru_0592 Muricauda ruestringensis DSM 13258 thioredoxin YP_004787064.1 634337 D 886377 CDS YP_004787065.1 344201922 11053405 complement(634649..635488) 1 NC_015945.1 PFAM: Universal stress protein family; InterPro IPR006016; KEGG: fbc:FB2170_00390 putative universal stress protein UspA; PFAM: UspA; SPTR: Putative universal stress protein UspA; UspA domain-containing protein 635488 11053405 Murru_0593 Muricauda ruestringensis DSM 13258 UspA domain-containing protein YP_004787065.1 634649 R 886377 CDS YP_004787066.1 344201923 11053406 complement(635514..636359) 1 NC_015945.1 PFAM: Universal stress protein family; InterPro IPR006016; KEGG: fbc:FB2170_14473 universal stress protein family; PFAM: UspA; SPTR: Universal stress protein family; UspA domain-containing protein 636359 11053406 Murru_0594 Muricauda ruestringensis DSM 13258 UspA domain-containing protein YP_004787066.1 635514 R 886377 CDS YP_004787067.1 344201924 11053407 complement(636659..638278) 1 NC_015945.1 PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG4146 symporter; InterPro IPR019900:IPR001734; KEGG: gfo:GFO_0701 sodium:solute symporter family protein; PFAM: Sodium/solute symporter; SPTR: Sodium:solute symporter family protein; TIGRFAM: Sodium/solute symporter, subgroup; SSS sodium solute transporter superfamily protein 638278 11053407 Murru_0595 Muricauda ruestringensis DSM 13258 SSS sodium solute transporter superfamily protein YP_004787067.1 636659 R 886377 CDS YP_004787068.1 344201925 11053408 complement(638288..639475) 1 NC_015945.1 PFAM: Aldose 1-epimerase; TIGRFAM: galactose mutarotase; COGs: COG2017 Galactose mutarotase; InterPro IPR008183; KEGG: rbi:RB2501_09535 aldose 1-epimerase; PFAM: Aldose 1-epimerase; PRIAM: Aldose 1-epimerase; SPTR: Aldose 1-epimerase; aldose 1-epimerase 639475 11053408 Murru_0596 Muricauda ruestringensis DSM 13258 aldose 1-epimerase YP_004787068.1 638288 R 886377 CDS YP_004787069.1 344201926 11053409 complement(639498..641003) 1 NC_015945.1 PFAM: L-arabinose isomerase; L-arabinose isomerase C-terminal domain; COGs: COG2160 L-arabinose isomerase; HAMAP: L-arabinose isomerase; InterPro IPR003762; KEGG: zpr:ZPR_2148 L-arabinose isomerase; PFAM: L-arabinose isomerase; PRIAM: L-arabinose isomerase; SPTR: L-arabinose isomerase; L-arabinose isomerase 641003 11053409 Murru_0597 Muricauda ruestringensis DSM 13258 L-arabinose isomerase YP_004787069.1 639498 R 886377 CDS YP_004787070.1 344201927 11053410 complement(641018..641719) 1 NC_015945.1 PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: fjo:Fjoh_1120 L-ribulose-5-phosphate 4-epimerase; PFAM: Class II aldolase/adducin, N-terminal; PRIAM: L-ribulose-5-phosphate 4-epimerase; SPTR: L-ribulose-5-phosphate 4-epimerase; L-ribulose-5-phosphate 4-epimerase 641719 11053410 Murru_0598 Muricauda ruestringensis DSM 13258 L-ribulose-5-phosphate 4-epimerase YP_004787070.1 641018 R 886377 CDS YP_004787071.1 344201928 11053411 complement(641727..643400) 1 NC_015945.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: L-ribulokinase; COGs: COG1069 Ribulose kinase; InterPro IPR005929:IPR018484:IPR018485; KEGG: gfo:GFO_0697 ribulokinase; PFAM: Carbohydrate kinase, FGGY, C-terminal; Carbohydrate kinase, FGGY, N-terminal; PRIAM: Ribulokinase; SPTR: Ribulokinase; TIGRFAM: L-ribulokinase; L-ribulokinase 643400 11053411 Murru_0599 Muricauda ruestringensis DSM 13258 L-ribulokinase YP_004787071.1 641727 R 886377 CDS YP_004787072.1 344201929 11053412 complement(643673..645643) 1 NC_015945.1 PFAM: Putative glycosyl hydrolase of unknown function (DUF1680); COGs: COG3533 conserved hypothetical protein; InterPro IPR012878; KEGG: bth:BT_3674 hypothetical protein; PFAM: Protein of unknown function DUF1680; SPTR: Putative uncharacterized protein; hypothetical protein 645643 11053412 Murru_0600 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787072.1 643673 R 886377 CDS YP_004787073.1 344201930 11053413 complement(645671..647203) 1 NC_015945.1 PFAM: Alpha-L-arabinofuranosidase C-terminus; COGs: COG3534 Alpha-L-arabinofuranosidase; InterPro IPR010720; KEGG: zpr:ZPR_2141 alpha-L-arabinofuranosidase; PFAM: Alpha-L-arabinofuranosidase, C-terminal; SMART: Alpha-L-arabinofuranosidase, C-terminal; SPTR: Alpha-L-arabinofuranosidase; alpha-L-arabinofuranosidase 647203 11053413 Murru_0601 Muricauda ruestringensis DSM 13258 alpha-L-arabinofuranosidase YP_004787073.1 645671 R 886377 CDS YP_004787074.1 344201931 11053414 647588..648325 1 NC_015945.1 PFAM: NUDIX domain; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086; KEGG: rbi:RB2501_09560 hypothetical protein; PFAM: NUDIX hydrolase domain; SPTR: Putative uncharacterized protein; NUDIX hydrolase 648325 11053414 Murru_0602 Muricauda ruestringensis DSM 13258 NUDIX hydrolase YP_004787074.1 647588 D 886377 CDS YP_004787075.1 344201932 11053415 complement(648347..650497) 1 NC_015945.1 PFAM: F5/8 type C domain; Glycosyl hydrolases family 43; COGs: COG3507 Beta-xylosidase; InterPro IPR006558:IPR006710:IPR000421; KEGG: lby:Lbys_0109 glycoside hydrolase family 43; PFAM: Glycoside hydrolase, family 43; Coagulation factor 5/8 type, C-terminal; SMART: LamG-like jellyroll fold; SPTR: Coagulation factor 5/8 type domain protein; glycoside hydrolase 650497 11053415 Murru_0603 Muricauda ruestringensis DSM 13258 glycoside hydrolase YP_004787075.1 648347 R 886377 CDS YP_004787076.1 344201933 11053416 complement(650522..653263) 1 NC_015945.1 KEGG: zpr:ZPR_1375 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 653263 11053416 Murru_0604 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787076.1 650522 R 886377 CDS YP_004787077.1 344201934 11053417 complement(653301..654998) 1 NC_015945.1 PFAM: Bacterial protein of unknown function (DUF885); COGs: COG4805 conserved hypothetical protein; InterPro IPR010281; KEGG: zpr:ZPR_1377 X-Pro dipeptidyl-peptidase; PFAM: Protein of unknown function DUF885; SPTR: X-Pro dipeptidyl-peptidase; hypothetical protein 654998 11053417 Murru_0605 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787077.1 653301 R 886377 CDS YP_004787078.1 344201935 11053418 complement(655195..658263) 1 NC_015945.1 PFAM: Putative glycosyl hydrolase of unknown function (DUF1680); Bacterial Ig-like domain (group 4); COGs: COG3533 conserved hypothetical protein; InterPro IPR012878; KEGG: cpi:Cpin_4617 protein of unknown function DUF1680; PFAM: Protein of unknown function DUF1680; SPTR: Putative uncharacterized protein; hypothetical protein 658263 11053418 Murru_0606 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787078.1 655195 R 886377 CDS YP_004787079.1 344201936 11053419 complement(658304..660556) 1 NC_015945.1 PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469:IPR001375; KEGG: zpr:ZPR_1379 prolyl oligopeptidase family; SPTR: Prolyl oligopeptidase family; prolyl oligopeptidase family 660556 11053419 Murru_0607 Muricauda ruestringensis DSM 13258 prolyl oligopeptidase family YP_004787079.1 658304 R 886377 CDS YP_004787080.1 344201937 11053420 complement(660704..661948) 1 NC_015945.1 PFAM: FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: zpr:ZPR_1382 D-amino acid dehydrogenase; PFAM: FAD dependent oxidoreductase; PRIAM: D-amino-acid dehydrogenase; SPTR: D-amino acid dehydrogenase; D-amino-acid dehydrogenase 661948 11053420 Murru_0608 Muricauda ruestringensis DSM 13258 D-amino-acid dehydrogenase YP_004787080.1 660704 R 886377 CDS YP_004787081.1 344201938 11053421 complement(661964..662971) 1 NC_015945.1 PFAM: Proline racemase; COGs: COG3938 Proline racemase; InterPro IPR008794; KEGG: fbc:FB2170_10616 proline racemase; PFAM: Proline racemase; PRIAM: 4-hydroxyproline epimerase; SPTR: Proline racemase; 4-hydroxyproline epimerase 662971 11053421 Murru_0609 Muricauda ruestringensis DSM 13258 4-hydroxyproline epimerase YP_004787081.1 661964 R 886377 CDS YP_004787082.1 344201939 11053422 complement(663024..664547) 1 NC_015945.1 PFAM: Aldehyde dehydrogenase family; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: fbc:FB2170_10611 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; PRIAM: Aldehyde dehydrogenase (NADP(+)); SPTR: Aldehyde dehydrogenase; aldehyde dehydrogenase 664547 11053422 Murru_0610 Muricauda ruestringensis DSM 13258 aldehyde dehydrogenase YP_004787082.1 663024 R 886377 CDS YP_004787083.1 344201940 11053423 complement(664544..665467) 1 NC_015945.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; HAMAP: Dihydrodipicolinate synthase; InterPro IPR002220; KEGG: zpr:ZPR_1385 dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase; PRIAM: Dihydrodipicolinate synthase; SPTR: Dihydrodipicolinate synthetase; dihydrodipicolinate synthase 665467 11053423 Murru_0611 Muricauda ruestringensis DSM 13258 dihydrodipicolinate synthase YP_004787083.1 664544 R 886377 CDS YP_004787084.1 344201941 11053424 665600..666442 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: zpr:ZPR_1386 activator protein MtlR; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Activator protein MtlR; AraC family transcriptional regulator 666442 11053424 Murru_0612 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004787084.1 665600 D 886377 CDS YP_004787085.1 344201942 11053425 complement(666606..668204) 1 NC_015945.1 PFAM: SusD family; InterPro IPR012944; KEGG: bvu:BVU_1134 hypothetical protein; PFAM: RagB/SusD; SPTR: Putative uncharacterized protein; RagB/SusD domain-containing protein 668204 11053425 Murru_0613 Muricauda ruestringensis DSM 13258 RagB/SusD domain-containing protein YP_004787085.1 666606 R 886377 CDS YP_004787086.1 344201943 11053426 complement(668217..671213) 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: bvu:BVU_1133 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative uncharacterized protein; TonB-dependent receptor plug 671213 11053426 Murru_0614 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004787086.1 668217 R 886377 CDS YP_004787087.1 344201944 11053427 671601..672971 1 NC_015945.1 PFAM: Exonuclease; GIY-YIG catalytic domain; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR013520:IPR000305:IPR006055; KEGG: fbc:FB2170_02150 DNA polymerase III subunit epsilon; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal; PRIAM: DNA-directed DNA polymerase; SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; SPTR: DNA polymerase III, epsilon subunit; DNA-directed DNA polymerase 672971 11053427 Murru_0615 Muricauda ruestringensis DSM 13258 DNA-directed DNA polymerase YP_004787087.1 671601 D 886377 CDS YP_004787088.1 344201945 11053428 complement(672984..673760) 1 NC_015945.1 PFAM: Aldose 1-epimerase; InterPro IPR008183; KEGG: fbc:FB2170_02195 hypothetical protein; PFAM: Aldose 1-epimerase; SPTR: Putative uncharacterized protein; aldose 1-epimerase 673760 11053428 Murru_0616 Muricauda ruestringensis DSM 13258 aldose 1-epimerase YP_004787088.1 672984 R 886377 CDS YP_004787089.1 344201946 11053429 complement(673760..675058) 1 NC_015945.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650; KEGG: fbc:FB2170_02200 putative hydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; SPTR: Peptidase M20; peptidase M20 675058 11053429 Murru_0617 Muricauda ruestringensis DSM 13258 peptidase M20 YP_004787089.1 673760 R 886377 CDS YP_004787090.1 344201947 11053430 complement(675123..676364) 1 NC_015945.1 PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: fbc:FB2170_02210 ABC transporter permease; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: ABC transporter permease protein; hypothetical protein 676364 11053430 Murru_0618 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787090.1 675123 R 886377 CDS YP_004787091.1 344201948 11053431 676368..677591 1 NC_015945.1 PFAM: Protein of unknown function (DUF1343); COGs: COG3876 conserved hypothetical protein; InterPro IPR008302; KEGG: fbc:FB2170_02215 hypothetical protein; PFAM: Uncharacterised conserved protein UCP016719; SPTR: Putative uncharacterized protein; hypothetical protein 677591 11053431 Murru_0619 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787091.1 676368 D 886377 CDS YP_004787092.1 344201949 11053432 complement(677722..678570) 1 NC_015945.1 PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: rbi:RB2501_10207 sterol desaturase-related protein; PFAM: Fatty acid hydroxylase; SPTR: Sterol desaturase-related protein; fatty acid hydroxylase 678570 11053432 Murru_0620 Muricauda ruestringensis DSM 13258 fatty acid hydroxylase YP_004787092.1 677722 R 886377 CDS YP_004787093.1 344201950 11053433 complement(678592..679086) 1 NC_015945.1 PFAM: Uncharacterised protein family (UPF0153); InterPro IPR005358; KEGG: fbc:FB2170_02220 hypothetical protein; PFAM: Uncharacterised protein family UPF0153; SPTR: Putative uncharacterized protein; hypothetical protein 679086 11053433 Murru_0621 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787093.1 678592 R 886377 CDS YP_004787094.1 344201951 11053434 679314..680024 1 NC_015945.1 PFAM: Tellurite resistance protein TehB; InterPro IPR013216; KEGG: fbc:FB2170_02230 putative methyltransferase; PFAM: Methyltransferase type 11; SPTR: Putative methyltransferase; type 11 methyltransferase 680024 11053434 Murru_0622 Muricauda ruestringensis DSM 13258 type 11 methyltransferase YP_004787094.1 679314 D 886377 CDS YP_004787095.1 344201952 11053435 680066..680866 1 NC_015945.1 KEGG: fbc:FB2170_02235 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 680866 11053435 Murru_0623 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787095.1 680066 D 886377 CDS YP_004787096.1 344201953 11053436 complement(680876..681526) 1 NC_015945.1 PFAM: Radical SAM superfamily; COGs: COG0602 Organic radical activating protein; InterPro IPR007197; KEGG: fbc:FB2170_02240 hypothetical protein; PFAM: Radical SAM; SPTR: Putative uncharacterized protein; radical SAM protein 681526 11053436 Murru_0624 Muricauda ruestringensis DSM 13258 radical SAM protein YP_004787096.1 680876 R 886377 CDS YP_004787097.1 344201954 11053437 complement(681542..681994) 1 NC_015945.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: sti:Sthe_1579 endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; SPTR: Putative endoribonuclease with L-PSP Domain; endoribonuclease L-PSP 681994 11053437 Murru_0625 Muricauda ruestringensis DSM 13258 endoribonuclease L-PSP YP_004787097.1 681542 R 886377 CDS YP_004787098.1 344201955 11053438 682051..683553 1 NC_015945.1 PFAM: Bacterial protein of unknown function (DUF853); COGs: COG0433 ATPase; InterPro IPR008571; KEGG: fbc:FB2170_02245 hypothetical protein; PFAM: Protein of unknown function DUF853, nucleotide triphosphate hydrolase, putative; SPTR: Putative uncharacterized protein; hypothetical protein 683553 11053438 Murru_0626 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787098.1 682051 D 886377 CDS YP_004787099.1 344201956 11053439 683561..684109 1 NC_015945.1 KEGG: fbc:FB2170_02250 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 684109 11053439 Murru_0627 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787099.1 683561 D 886377 CDS YP_004787100.1 344201957 11053440 complement(684120..684542) 1 NC_015945.1 PFAM: HxlR-like helix-turn-helix; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: fbc:FB2170_02255 putative transcriptional regulator; PFAM: Helix-turn-helix, HxlR type; SPTR: Predicted transcriptional regulator; HxlR family transcriptional regulator 684542 11053440 Murru_0628 Muricauda ruestringensis DSM 13258 HxlR family transcriptional regulator YP_004787100.1 684120 R 886377 CDS YP_004787101.1 344201958 11053441 684640..685479 1 NC_015945.1 PFAM: Putative lysophospholipase; TAP-like protein; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: rbi:RB2501_10120 hydrolase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Hydrolase, putative; alpha/beta hydrolase fold protein 685479 11053441 Murru_0629 Muricauda ruestringensis DSM 13258 alpha/beta hydrolase fold protein YP_004787101.1 684640 D 886377 CDS YP_004787102.1 344201959 11053442 685513..685935 1 NC_015945.1 COGs: COG3565 dioxygenase of extradiol dioxygenase family; InterPro IPR004360; KEGG: fbc:FB2170_02265 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase; bleomycin resistance protein 685935 11053442 Murru_0630 Muricauda ruestringensis DSM 13258 bleomycin resistance protein YP_004787102.1 685513 D 886377 CDS YP_004787103.1 344201960 11053443 complement(685937..686563) 1 NC_015945.1 PFAM: Predicted membrane protein (DUF2306); InterPro IPR018750; KEGG: fbc:FB2170_02285 hypothetical protein; PFAM: Protein of unknown function DUF2306, membrane; SPTR: Putative uncharacterized protein; hypothetical protein 686563 11053443 Murru_0631 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787103.1 685937 R 886377 CDS YP_004787104.1 344201961 11053444 686684..686824 1 NC_015945.1 hypothetical protein 686824 11053444 Murru_0632 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787104.1 686684 D 886377 CDS YP_004787105.1 344201962 11053445 complement(686830..687708) 1 NC_015945.1 PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; InterPro IPR020630:IPR020631:IPR000672; KEGG: fbc:FB2170_02300 putative methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; PRIAM: Methenyltetrahydrofolate cyclohydrolase; SPTR: Bifunctional protein folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD 687708 11053445 Murru_0633 Muricauda ruestringensis DSM 13258 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD YP_004787105.1 686830 R 886377 CDS YP_004787106.1 344201963 11053446 complement(687813..689141) 1 NC_015945.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein; COGs: COG0541 Signal recognition particle GTPase; InterProIPR013822:IPR000897:IPR004125:IPR004780:IPR 003593; KEGG: fbc:FB2170_02305 signal recognition particle protein; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core; SPTR: Signal recognition particle protein; TIGRFAM: Signal recognition particle, SRP; signal recognition particle protein 689141 11053446 Murru_0634 Muricauda ruestringensis DSM 13258 signal recognition particle protein YP_004787106.1 687813 R 886377 CDS YP_004787107.1 344201964 11053447 689445..690431 1 NC_015945.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: pdi:BDI_2233 transposase; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; SPTR: Transposase; transposase IS116/IS110/IS902 family protein 690431 11053447 Murru_0635 Muricauda ruestringensis DSM 13258 transposase IS116/IS110/IS902 family protein YP_004787107.1 689445 D 886377 CDS YP_004787108.1 344201965 11053448 complement(690648..692408) 1 NC_015945.1 KEGG: rbi:RB2501_10070 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 692408 11053448 Murru_0636 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787108.1 690648 R 886377 CDS YP_004787109.1 344201966 11053449 692522..693022 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: fbc:FB2170_02320 ECF family RNA polymerase sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 693022 11053449 Murru_0637 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004787109.1 692522 D 886377 CDS YP_004787110.1 344201967 11053450 693245..694159 1 NC_015945.1 PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: fbc:FB2170_02325 hypothetical protein; PFAM: FecR protein; SPTR: Putative uncharacterized protein; anti-FecI sigma factor FecR 694159 11053450 Murru_0638 Muricauda ruestringensis DSM 13258 anti-FecI sigma factor FecR YP_004787110.1 693245 D 886377 CDS YP_004787111.1 344201968 11053451 694137..696704 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; InterPro IPR012910; KEGG: fbc:FB2170_02330 putative outer membrane protein; PFAM: TonB-dependent receptor, plug; SPTR: Putative outer membrane protein probably involved in nutrient binding; TonB-dependent receptor plug 696704 11053451 Murru_0639 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004787111.1 694137 D 886377 CDS YP_004787112.1 344201969 11053452 696796..697155 1 NC_015945.1 PFAM: Protein of unknown function (DUF559); COGs: COG2852 conserved hypothetical protein; InterPro IPR007569; KEGG: mtt:Ftrac_2668 hypothetical protein; PFAM: Domain of unknown function DUF559; SPTR: Putative uncharacterized protein; hypothetical protein 697155 11053452 Murru_0640 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787112.1 696796 D 886377 CDS YP_004787113.1 344201970 11053453 complement(697198..698976) 1 NC_015945.1 PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; COGs: COG0018 Arginyl-tRNA synthetase; HAMAP: Arginyl-tRNA synthetase, class Ic; InterProIPR005148:IPR000494:IPR015945:IPR008909:IPR 001278; KEGG: fbc:FB2170_02350 arginyl-tRNA synthetase; PFAM: DALR anticodon binding; Arginyl-tRNA synthetase, class Ic, core; Arginyl tRNA synthetase, class Ic, N-terminal; EGF receptor, L domain; PRIAM: Arginine--tRNA ligase; SMART: DALR anticodon binding; SPTR: Arginyl-tRNA synthetase; TIGRFAM: Arginyl-tRNA synthetase, class Ic; arginyl-tRNA synthetase 698976 11053453 Murru_0641 Muricauda ruestringensis DSM 13258 arginyl-tRNA synthetase YP_004787113.1 697198 R 886377 CDS YP_004787114.1 344201971 11053454 699070..699495 1 NC_015945.1 KEGG: rbi:RB2501_10035 arginyl-tRNA synthetase; SPTR: Arginyl-tRNA synthetase; arginyl-tRNA synthetase 699495 11053454 Murru_0642 Muricauda ruestringensis DSM 13258 arginyl-tRNA synthetase YP_004787114.1 699070 D 886377 CDS YP_004787115.1 344201972 11053455 699492..700916 1 NC_015945.1 PFAM: Protein of unknown function (DUF2867); NmrA-like family; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR013120; KEGG: rbi:RB2501_10030 hypothetical protein; PFAM: Male sterility, NAD-binding; SPTR: Putative uncharacterized protein; hypothetical protein 700916 11053455 Murru_0643 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787115.1 699492 D 886377 CDS YP_004787116.1 344201973 11053456 701238..702752 1 NC_015945.1 KEGG: fbc:FB2170_04645 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 702752 11053456 Murru_0644 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787116.1 701238 D 886377 CDS YP_004787117.1 344201974 11053457 702916..703062 1 NC_015945.1 hypothetical protein 703062 11053457 Murru_0645 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787117.1 702916 D 886377 CDS YP_004787118.1 344201975 11053458 complement(703211..704146) 1 NC_015945.1 COGs: COG4874 Uncharacterized protein containing a pentein-type domain; KEGG: fbc:FB2170_02355 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 704146 11053458 Murru_0646 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787118.1 703211 R 886377 CDS YP_004787119.1 344201976 11053459 complement(704200..705186) 1 NC_015945.1 PFAM: Amidinotransferase; COGs: COG1834 N-Dimethylarginine dimethylaminohydrolase; InterPro IPR003198; KEGG: fbc:FB2170_02360 DdaH family protein; PFAM: Amidinotransferase; SPTR: DdaH family protein; amidinotransferase 705186 11053459 Murru_0647 Muricauda ruestringensis DSM 13258 amidinotransferase YP_004787119.1 704200 R 886377 CDS YP_004787120.1 344201977 11053460 705341..705850 1 NC_015945.1 hypothetical protein 705850 11053460 Murru_0648 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787120.1 705341 D 886377 CDS YP_004787121.1 344201978 11053461 complement(705908..707191) 1 NC_015945.1 PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type); COGs: COG0372 Citrate synthase; InterPro IPR002020:IPR010953; KEGG: rbi:RB2501_10015 citrate synthase; PFAM: Citrate synthase-like; PRIAM: Citrate (Si)-synthase; SPTR: Citrate synthase; TIGRFAM: Citrate synthase, type II; citrate synthase I 707191 11053461 Murru_0649 Muricauda ruestringensis DSM 13258 citrate synthase I YP_004787121.1 705908 R 886377 CDS YP_004787122.1 344201979 11053462 complement(707311..708849) 1 NC_015945.1 PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type; COGs: COG0297 Glycogen synthase; InterPro IPR013534:IPR001296; KEGG: fbc:FB2170_02370 glycogen synthase; PFAM: Starch synthase, catalytic domain; Glycosyl transferase, group 1; PRIAM: Starch synthase; SPTR: Glycogen synthase; starch synthase 708849 11053462 Murru_0650 Muricauda ruestringensis DSM 13258 starch synthase YP_004787122.1 707311 R 886377 CDS YP_004787123.1 344201980 11053463 complement(708968..710260) 1 NC_015945.1 PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase; COGs: COG0148 Enolase; HAMAP: Enolase; InterPro IPR020811:IPR020810:IPR000941; KEGG: fbc:FB2170_02375 enolase; PFAM: Enolase, C-terminal; Enolase, N-terminal; PRIAM: Phosphopyruvate hydratase; SPTR: Enolase; TIGRFAM: Enolase; enolase 710260 11053463 Murru_0651 Muricauda ruestringensis DSM 13258 enolase YP_004787123.1 708968 R 886377 CDS YP_004787124.1 344201981 11053464 complement(710543..711655) 1 NC_015945.1 PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; COGs: COG0505 Carbamoylphosphate synthase small subunit; InterPro IPR002474:IPR000991:IPR006274; KEGG: fbc:FB2170_02380 carbamoyl-phosphate synthase small subunit; PFAM: Glutamine amidotransferase class-I, C-terminal; Carbamoyl-phosphate synthase, small subunit, N-terminal; PRIAM: Carbamoyl-phosphate synthase (glutamine-hydrolyzing); SPTR: Carbamoyl-phosphate synthase, small subunit; TIGRFAM: Carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit 711655 11053464 Murru_0652 Muricauda ruestringensis DSM 13258 carbamoyl-phosphate synthase small subunit YP_004787124.1 710543 R 886377 CDS YP_004787125.1 344201982 11053465 complement(711753..712265) 1 NC_015945.1 PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17; COGs: COG0203 Ribosomal protein L17; HAMAP: Ribosomal protein L17; InterPro IPR000456; KEGG: fbc:FB2170_02385 putative 50S ribosomal protein L17; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; 50S ribosomal protein L17 712265 11053465 Murru_0653 Muricauda ruestringensis DSM 13258 50S ribosomal protein L17 YP_004787125.1 711753 R 886377 CDS YP_004787126.1 344201983 11053466 complement(712326..713318) 1 NC_015945.1 PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type; COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit; HAMAP: DNA-directed RNA polymerase, alpha subunit; InterProIPR011261:IPR011262:IPR011260:IPR011773:IPR 011263; KEGG: fbc:FB2170_02390 DNA-directed RNA polymerase subunit alpha; PFAM: DNA-directed RNA polymerase, insert domain; DNA-directed RNA polymerase, dimerisation; RNA polymerase, alpha subunit, C-terminal; SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; SPTR: DNA-directed RNA polymerase alpha subunit; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; DNA-directed RNA polymerase subunit alpha 713318 11053466 Murru_0654 Muricauda ruestringensis DSM 13258 DNA-directed RNA polymerase subunit alpha YP_004787126.1 712326 R 886377 CDS YP_004787127.1 344201984 11053467 complement(713340..713945) 1 NC_015945.1 PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type; COGs: COG0522 Ribosomal protein S4 and related protein; InterPro IPR001912:IPR002942:IPR005709; KEGG: rbi:RB2501_09980 30S ribosomal protein S4; PFAM: Ribosomal protein S4/S9, N-terminal; RNA-binding S4; SMART: RNA-binding S4; SPTR: 30S ribosomal protein S4; TIGRFAM: Ribosomal protein S4, bacterial-type; 30S ribosomal protein S4 713945 11053467 Murru_0655 Muricauda ruestringensis DSM 13258 30S ribosomal protein S4 YP_004787127.1 713340 R 886377 CDS YP_004787128.1 344201985 11053468 complement(714055..714447) 1 NC_015945.1 PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; COGs: COG0100 Ribosomal protein S11; InterPro IPR001971:IPR019981; KEGG: fbc:FB2170_02400 30S ribosomal protein S11; PFAM: Ribosomal protein S11; SPTR: 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; 30S ribosomal protein S11 714447 11053468 Murru_0656 Muricauda ruestringensis DSM 13258 30S ribosomal protein S11 YP_004787128.1 714055 R 886377 CDS YP_004787129.1 344201986 11053469 complement(714460..714834) 1 NC_015945.1 PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13; COGs: COG0099 Ribosomal protein S13; InterPro IPR001892:IPR019980; KEGG: rbi:RB2501_09970 30S ribosomal protein S13; PFAM: Ribosomal protein S13; SPTR: 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; 30S ribosomal protein S13 714834 11053469 Murru_0657 Muricauda ruestringensis DSM 13258 30S ribosomal protein S13 YP_004787129.1 714460 R 886377 CDS YP_004787130.1 344201987 11053470 complement(714837..714953) 1 NC_015945.1 PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; HAMAP: Ribosomal protein L36; InterPro IPR000473; KEGG: cat:CA2559_05830 ribosomal protein L36; PFAM: Ribosomal protein L36; SPTR: 50S ribosomal protein L36; TIGRFAM: Ribosomal protein L36; manually curated; 50S ribosomal protein L36 714953 11053470 Murru_0658 Muricauda ruestringensis DSM 13258 50S ribosomal protein L36 YP_004787130.1 714837 R 886377 CDS YP_004787131.1 344201988 11053471 complement(714958..715173) 1 NC_015945.1 PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1; COGs: COG0361 Translation initiation factor 1 (IF-1); HAMAP: Translation initiation factor IF-1; InterPro IPR006196:IPR004368; KEGG: zpr:ZPR_3854 translation initiation factor IF-1; PFAM: RNA-binding domain, S1, IF1 type; SPTR: Translation initiation factor IF-1; TIGRFAM: Translation initiation factor IF-1; translation initiation factor IF-1 715173 11053471 Murru_0659 Muricauda ruestringensis DSM 13258 translation initiation factor IF-1 YP_004787131.1 714958 R 886377 CDS YP_004787132.1 344201989 11053472 complement(715177..716520) 1 NC_015945.1 PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; COGs: COG0201 Preprotein translocase subunit SecY; InterPro IPR002208; KEGG: fbc:FB2170_02420 preprotein translocase SecY; PFAM: SecY protein; SPTR: Preprotein translocase subunit secY; TIGRFAM: SecY protein; preprotein translocase subunit SecY 716520 11053472 Murru_0660 Muricauda ruestringensis DSM 13258 preprotein translocase subunit SecY YP_004787132.1 715177 R 886377 CDS YP_004787133.1 344201990 11053473 complement(716531..716983) 1 NC_015945.1 PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle; COGs: COG0200 Ribosomal protein L15; InterPro IPR005749; KEGG: fbc:FB2170_02425 putative 50S ribosomal protein L15; SPTR: 50S ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; 50S ribosomal protein L15 716983 11053473 Murru_0661 Muricauda ruestringensis DSM 13258 50S ribosomal protein L15 YP_004787133.1 716531 R 886377 CDS YP_004787134.1 344201991 11053474 complement(716997..717176) 1 NC_015945.1 PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle; COGs: COG1841 Ribosomal protein L30/L7E; InterPro IPR016082:IPR005996; KEGG: fbc:FB2170_02430 50S ribosomal protein L30; PFAM: Ribosomal protein L30, ferredoxin-like fold domain; SPTR: 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; 50S ribosomal protein L30 717176 11053474 Murru_0662 Muricauda ruestringensis DSM 13258 50S ribosomal protein L30 YP_004787134.1 716997 R 886377 CDS YP_004787135.1 344201992 11053475 complement(717189..717713) 1 NC_015945.1 PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type; COGs: COG0098 Ribosomal protein S5; InterPro IPR013810:IPR005324:IPR005712; KEGG: rbi:RB2501_09940 30S ribosomal protein S5; PFAM: Ribosomal protein S5, N-terminal; Ribosomal protein S5, C-terminal; SPTR: 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; 30S ribosomal protein S5 717713 11053475 Murru_0663 Muricauda ruestringensis DSM 13258 30S ribosomal protein S5 YP_004787135.1 717189 R 886377 CDS YP_004787136.1 344201993 11053476 complement(717720..718073) 1 NC_015945.1 PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type; COGs: COG0256 Ribosomal protein L18; InterPro IPR005484:IPR004389; KEGG: fbc:FB2170_02440 50S ribosomal protein L18; PFAM: Ribosomal protein L18/L5; SPTR: 50S ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; 50S ribosomal protein L18 718073 11053476 Murru_0664 Muricauda ruestringensis DSM 13258 50S ribosomal protein L18 YP_004787136.1 717720 R 886377 CDS YP_004787137.1 344201994 11053477 complement(718085..718627) 1 NC_015945.1 PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type; COGs: COG0097 Ribosomal protein L6P/L9E; InterPro IPR020040:IPR019906; KEGG: fbc:FB2170_02445 50S ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; SPTR: 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; 50S ribosomal protein L6 718627 11053477 Murru_0665 Muricauda ruestringensis DSM 13258 50S ribosomal protein L6 YP_004787137.1 718085 R 886377 CDS YP_004787138.1 344201995 11053478 complement(718647..719045) 1 NC_015945.1 PFAM: Ribosomal protein S8; COGs: COG0096 Ribosomal protein S8; InterPro IPR000630; KEGG: fbc:FB2170_02450 30S ribosomal protein S8; PFAM: Ribosomal protein S8; SPTR: 30S ribosomal protein S8; 30S ribosomal protein S8 719045 11053478 Murru_0666 Muricauda ruestringensis DSM 13258 30S ribosomal protein S8 YP_004787138.1 718647 R 886377 CDS YP_004787139.1 344201996 11053479 complement(719064..719333) 1 NC_015945.1 PFAM: Ribosomal protein S14p/S29e; COGs: COG0199 Ribosomal protein S14; HAMAP: Ribosomal protein S14, bacterial/plastid; InterPro IPR001209:IPR023036; KEGG: fbc:FB2170_02455 30S ribosomal protein S14; PFAM: Ribosomal protein S14; SPTR: 30S ribosomal protein S14; 30S ribosomal protein S14 719333 11053479 Murru_0667 Muricauda ruestringensis DSM 13258 30S ribosomal protein S14 YP_004787139.1 719064 R 886377 CDS YP_004787140.1 344201997 11053480 complement(719335..719886) 1 NC_015945.1 PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5; COGs: COG0094 Ribosomal protein L5; InterPro IPR002132; KEGG: rbi:RB2501_09915 50S ribosomal protein L5; PFAM: Ribosomal protein L5; SPTR: 50S ribosomal protein L5; 50S ribosomal protein L5 719886 11053480 Murru_0668 Muricauda ruestringensis DSM 13258 50S ribosomal protein L5 YP_004787140.1 719335 R 886377 CDS YP_004787141.1 344201998 11053481 complement(719889..720200) 1 NC_015945.1 PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle; COGs: COG0198 Ribosomal protein L24; InterPro IPR005824:IPR003256; KEGG: fbc:FB2170_02465 50S ribosomal protein L24; PFAM: KOW; SMART: KOW; SPTR: 50S ribosomal protein L24; TIGRFAM: Ribosomal protein L24; 50S ribosomal protein L24 720200 11053481 Murru_0669 Muricauda ruestringensis DSM 13258 50S ribosomal protein L24 YP_004787141.1 719889 R 886377 CDS YP_004787142.1 344201999 11053482 complement(720217..720585) 1 NC_015945.1 PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle; COGs: COG0093 Ribosomal protein L14; InterPro IPR000218:IPR005745; KEGG: rbi:RB2501_09905 50S ribosomal protein L14; PFAM: Ribosomal protein L14b/L23e; SPTR: 50S ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; 50S ribosomal protein L14 720585 11053482 Murru_0670 Muricauda ruestringensis DSM 13258 50S ribosomal protein L14 YP_004787142.1 720217 R 886377 CDS YP_004787143.1 344202000 11053483 complement(720588..720845) 1 NC_015945.1 PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; COGs: COG0186 Ribosomal protein S17; InterPro IPR000266:IPR019984; KEGG: fbc:FB2170_02475 30S ribosomal protein S17; PFAM: Ribosomal protein S17; SPTR: 30S ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; 30S ribosomal protein S17 720845 11053483 Murru_0671 Muricauda ruestringensis DSM 13258 30S ribosomal protein S17 YP_004787143.1 720588 R 886377 CDS YP_004787144.1 344202001 11053484 complement(720859..721050) 1 NC_015945.1 PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; InterPro IPR001854; KEGG: rbi:RB2501_09895 50S ribosomal protein L29; PFAM: Ribosomal protein L29; SPTR: 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29; 50S ribosomal protein L29 721050 11053484 Murru_0672 Muricauda ruestringensis DSM 13258 50S ribosomal protein L29 YP_004787144.1 720859 R 886377 CDS YP_004787145.1 344202002 11053485 complement(721070..721489) 1 NC_015945.1 PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle; COGs: COG0197 Ribosomal protein L16/L10E; HAMAP: Ribosomal protein L16; InterPro IPR016180:IPR000114; KEGG: fbc:FB2170_02485 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; SPTR: 50S ribosomal protein L16; TIGRFAM: Ribosomal protein L16; 50S ribosomal protein L16 721489 11053485 Murru_0673 Muricauda ruestringensis DSM 13258 50S ribosomal protein L16 YP_004787145.1 721070 R 886377 CDS YP_004787146.1 344202003 11053486 complement(721509..722219) 1 NC_015945.1 PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type; COGs: COG0092 Ribosomal protein S3; InterProIPR008282:IPR004044:IPR001351:IPR005704:IPR 004087; KEGG: rbi:RB2501_09885 30S ribosomal protein S3; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; SMART: K Homology; SPTR: 30S ribosomal protein S3; TIGRFAM: Ribosomal protein S3, bacterial; 30S ribosomal protein S3 722219 11053486 Murru_0674 Muricauda ruestringensis DSM 13258 30S ribosomal protein S3 YP_004787146.1 721509 R 886377 CDS YP_004787147.1 344202004 11053487 complement(722229..722636) 1 NC_015945.1 PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type; COGs: COG0091 Ribosomal protein L22; InterPro IPR001063:IPR005727; KEGG: fbc:FB2170_02495 50S ribosomal protein L22; PFAM: Ribosomal protein L22/L17; SPTR: 50S ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; 50S ribosomal protein L22 722636 11053487 Murru_0675 Muricauda ruestringensis DSM 13258 50S ribosomal protein L22 YP_004787147.1 722229 R 886377 CDS YP_004787148.1 344202005 11053488 complement(722644..722922) 1 NC_015945.1 PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle; COGs: COG0185 Ribosomal protein S19; InterPro IPR002222:IPR005732; KEGG: coc:Coch_1151 30S ribosomal protein S19; PFAM: Ribosomal protein S19/S15; SPTR: 30S ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; 30S ribosomal protein S19 722922 11053488 Murru_0676 Muricauda ruestringensis DSM 13258 30S ribosomal protein S19 YP_004787148.1 722644 R 886377 CDS YP_004787149.1 344202006 11053489 complement(722934..723758) 1 NC_015945.1 PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar; COGs: COG0090 Ribosomal protein L2; InterPro IPR022666:IPR022669:IPR005880; KEGG: rbi:RB2501_09870 50S ribosomal protein L2; PFAM: Ribosomal protein L2, C-terminal; Ribosomal Proteins L2, RNA binding domain; SPTR: 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; 50S ribosomal protein L2 723758 11053489 Murru_0677 Muricauda ruestringensis DSM 13258 50S ribosomal protein L2 YP_004787149.1 722934 R 886377 CDS YP_004787150.1 344202007 11053490 complement(723768..724058) 1 NC_015945.1 PFAM: Ribosomal protein L23; COGs: COG0089 Ribosomal protein L23; InterPro IPR013025; KEGG: fbc:FB2170_02510 putative 50S ribosomal protein L23; PFAM: Ribosomal protein L25/L23; SPTR: 50S ribosomal protein L23; 50S ribosomal protein L25 724058 11053490 Murru_0678 Muricauda ruestringensis DSM 13258 50S ribosomal protein L25 YP_004787150.1 723768 R 886377 CDS YP_004787151.1 344202008 11053491 complement(724066..724695) 1 NC_015945.1 PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle; COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: fbc:FB2170_02515 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; 50S ribosomal protein L4 724695 11053491 Murru_0679 Muricauda ruestringensis DSM 13258 50S ribosomal protein L4 YP_004787151.1 724066 R 886377 CDS YP_004787152.1 344202009 11053492 complement(724695..725312) 1 NC_015945.1 PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial; COGs: COG0087 Ribosomal protein L3; InterPro IPR000597:IPR019927; KEGG: fbc:FB2170_02520 50S ribosomal protein L3; PFAM: Ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; 50S ribosomal protein L3 725312 11053492 Murru_0680 Muricauda ruestringensis DSM 13258 50S ribosomal protein L3 YP_004787152.1 724695 R 886377 CDS YP_004787153.1 344202010 11053493 complement(725477..725782) 1 NC_015945.1 PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle; COGs: COG0051 Ribosomal protein S10; HAMAP: Ribosomal protein S10 subgroup; InterPro IPR001848:IPR005731; KEGG: fbc:FB2170_02525 30S ribosomal protein S10; PFAM: Ribosomal protein S10; SPTR: 30S ribosomal protein S10; TIGRFAM: Ribosomal protein S10 subgroup; 30S ribosomal protein S10 725782 11053493 Murru_0681 Muricauda ruestringensis DSM 13258 30S ribosomal protein S10 YP_004787153.1 725477 R 886377 CDS YP_004787154.1 344202011 11053494 complement(725795..727921) 1 NC_015945.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; COGs: COG0480 Translation elongation factors (GTPase); InterProIPR000795:IPR004161:IPR005517:IPR000640:IPR 004540:IPR005225; KEGG: fbc:FB2170_02530 elongation factor EF-2; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; SMART: Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; SPTR: Elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; translation elongation factor G 727921 11053494 Murru_0682 Muricauda ruestringensis DSM 13258 translation elongation factor G YP_004787154.1 725795 R 886377 CDS YP_004787155.1 344202012 11053495 complement(727930..728406) 1 NC_015945.1 PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle; COGs: COG0049 Ribosomal protein S7; InterPro IPR000235:IPR005717; KEGG: gfo:GFO_2842 30S ribosomal protein S7; PFAM: Ribosomal protein S7; SPTR: 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; 30S ribosomal protein S7 728406 11053495 Murru_0683 Muricauda ruestringensis DSM 13258 30S ribosomal protein S7 YP_004787155.1 727930 R 886377 CDS YP_004787156.1 344202013 11053496 complement(728426..728800) 1 NC_015945.1 PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle; COGs: COG0048 Ribosomal protein S12; InterPro IPR006032:IPR005679; KEGG: fbc:FB2170_02540 30S ribosomal protein S12; PFAM: Ribosomal protein S12/S23; SPTR: 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacteria; 30S ribosomal protein S12 728800 11053496 Murru_0684 Muricauda ruestringensis DSM 13258 30S ribosomal protein S12 YP_004787156.1 728426 R 886377 CDS YP_004787157.1 344202014 11053497 729295..732519 1 NC_015945.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: rbi:RB2501_09830 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein probably involved in nutrient binding; TonB-dependent receptor plug 732519 11053497 Murru_0685 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004787157.1 729295 D 886377 CDS YP_004787158.1 344202015 11053498 732541..734265 1 NC_015945.1 KEGG: rbi:RB2501_09825 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 734265 11053498 Murru_0686 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787158.1 732541 D 886377 CDS YP_004787159.1 344202016 11053499 734285..735169 1 NC_015945.1 KEGG: zpr:ZPR_3680 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 735169 11053499 Murru_0687 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787159.1 734285 D 886377 CDS YP_004787160.1 344202017 11053500 735305..736048 1 NC_015945.1 KEGG: fbc:FB2170_02565 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 736048 11053500 Murru_0688 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787160.1 735305 D 886377 CDS YP_004787161.1 344202018 11053501 736082..737422 1 NC_015945.1 PFAM: Arylsulfotransferase (ASST); KEGG: fbc:FB2170_02560 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 737422 11053501 Murru_0689 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787161.1 736082 D 886377 CDS YP_004787162.1 344202019 11053502 737514..738245 1 NC_015945.1 PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; COGs: COG0566 rRNA methylase; InterPro IPR013123:IPR001537:IPR004441; KEGG: fbc:FB2170_02570 putative tRNA/rRNA methyltransferase; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SMART: RNA 2-O ribose methyltransferase, substrate binding; SPTR: Putative tRNA/rRNA methyltransferase; TIGRFAM: RNA methyltransferase TrmH, group 3; TrmH family RNA methyltransferase 738245 11053502 Murru_0690 Muricauda ruestringensis DSM 13258 TrmH family RNA methyltransferase YP_004787162.1 737514 D 886377 CDS YP_004787163.1 344202020 11053503 complement(738242..738970) 1 NC_015945.1 PFAM: Rhomboid family; InterPro IPR022764; KEGG: fbc:FB2170_02575 putative transmembrane protein; PFAM: Peptidase S54, rhomboid domain; SPTR: Putative transmembrane protein; peptidase S54, rhomboid domain-containing protein 738970 11053503 Murru_0691 Muricauda ruestringensis DSM 13258 peptidase S54, rhomboid domain-containing protein YP_004787163.1 738242 R 886377 CDS YP_004787164.1 344202021 11053504 739091..740368 1 NC_015945.1 PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA); COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR003959:IPR003593; KEGG: fbc:FB2170_02580 putative AAA family ATPase protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: Putative AAA family ATPase protein; AAA ATPase 740368 11053504 Murru_0692 Muricauda ruestringensis DSM 13258 AAA ATPase YP_004787164.1 739091 D 886377 CDS YP_004787165.1 344202022 11053505 complement(740365..741183) 1 NC_015945.1 KEGG: fbc:FB2170_02585 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 741183 11053505 Murru_0693 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787165.1 740365 R 886377 CDS YP_004787166.1 344202023 11053506 complement(741221..742681) 1 NC_015945.1 KEGG: fbc:FB2170_02590 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 742681 11053506 Murru_0694 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787166.1 741221 R 886377 CDS YP_004787167.1 344202024 11053507 complement(742678..743223) 1 NC_015945.1 KEGG: fbc:FB2170_02595 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 743223 11053507 Murru_0695 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787167.1 742678 R 886377 CDS YP_004787168.1 344202025 11053508 complement(743281..743970) 1 NC_015945.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD superfamily (subfamily IA) hydrolase, TIGR02254; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834:IPR011951:IPR006439; KEGG: fbc:FB2170_02600 haloacid dehalogenase-like hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase 743970 11053508 Murru_0696 Muricauda ruestringensis DSM 13258 HAD-superfamily hydrolase YP_004787168.1 743281 R 886377 CDS YP_004787169.1 344202026 11053509 complement(743963..745258) 1 NC_015945.1 KEGG: rbi:RB2501_09785 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 745258 11053509 Murru_0697 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787169.1 743963 R 886377 CDS YP_004787170.1 344202027 11053510 complement(745271..745969) 1 NC_015945.1 PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: fbc:FB2170_02610 putative DNA repair protein; PFAM: Uncharacterised protein family UPF0758; SPTR: Putative DNA repair protein; TIGRFAM: Uncharacterised protein family UPF0758; DNA repair protein RadC 745969 11053510 Murru_0698 Muricauda ruestringensis DSM 13258 DNA repair protein RadC YP_004787170.1 745271 R 886377 CDS YP_004787171.1 344202028 11053511 746023..746472 1 NC_015945.1 PFAM: Protein of unknown function (DUF1569); KEGG: rbi:RB2501_09775 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 746472 11053511 Murru_0699 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787171.1 746023 D 886377 CDS YP_004787172.1 344202029 11053512 complement(746476..747369) 1 NC_015945.1 PFAM: Mur ligase family, catalytic domain; Mur ligase middle domain; COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; InterPro IPR000713:IPR013221; KEGG: fbc:FB2170_02620 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; PFAM: Mur ligase, N-terminal; Mur ligase, central; PRIAM: UDP-N-acetylmuramate--L-alanine ligase; SPTR:UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl -meso-diaminopimelateligase; UDP-N-acetylmuramate--L-alanine ligase 747369 11053512 Murru_0700 Muricauda ruestringensis DSM 13258 UDP-N-acetylmuramate--L-alanine ligase YP_004787172.1 746476 R 886377 CDS YP_004787173.1 344202030 11053513 747467..747778 1 NC_015945.1 PFAM: Cupin domain; InterPro IPR013096; KEGG: rbi:RB2501_09765 putative pectin degradation protein; PFAM: Cupin 2, conserved barrel; SPTR: Possible pectin degradation protein; cupin 2 barrel domain-containing protein 747778 11053513 Murru_0701 Muricauda ruestringensis DSM 13258 cupin 2 barrel domain-containing protein YP_004787173.1 747467 D 886377 CDS YP_004787174.1 344202031 11053514 747782..748567 1 NC_015945.1 PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: fbc:FB2170_02630 putative short-chain dehydrogenase/reductase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Putative short-chain dehydrogenase/reductase; 3-oxoacyl-ACP reductase 748567 11053514 Murru_0702 Muricauda ruestringensis DSM 13258 3-oxoacyl-ACP reductase YP_004787174.1 747782 D 886377 CDS YP_004787175.1 344202032 11053515 748661..749038 1 NC_015945.1 PFAM: DoxX; InterPro IPR011637; KEGG: fbc:FB2170_02640 hypothetical protein; PFAM: Uncharacterised protein family YphA; SPTR: Putative uncharacterized protein; DoxX family protein 749038 11053515 Murru_0703 Muricauda ruestringensis DSM 13258 DoxX family protein YP_004787175.1 748661 D 886377 CDS YP_004787176.1 344202033 11053516 complement(749102..749827) 1 NC_015945.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: zpr:ZPR_4679 two-component system regulatory protein; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Two-component system regulatory protein; LytTR family two component transcriptional regulator 749827 11053516 Murru_0704 Muricauda ruestringensis DSM 13258 LytTR family two component transcriptional regulator YP_004787176.1 749102 R 886377 CDS YP_004787177.1 344202034 11053517 complement(749824..750882) 1 NC_015945.1 PFAM: Histidine kinase; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559:IPR003594; KEGG: zpr:ZPR_4680 DEAD/DEAH box helicase-like protein; PFAM: Signal transduction histidine kinase, internal region; ATPase-like, ATP-binding domain; SPTR: DEAD/DEAH box helicase-like protein; putative signal transduction histidine kinase 750882 11053517 Murru_0705 Muricauda ruestringensis DSM 13258 putative signal transduction histidine kinase YP_004787177.1 749824 R 886377 CDS YP_004787178.1 344202035 11053518 complement(751384..751908) 1 NC_015945.1 KEGG: fbc:FB2170_02645 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 751908 11053518 Murru_0706 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787178.1 751384 R 886377 CDS YP_004787179.1 344202036 11053519 complement(751974..752975) 1 NC_015945.1 PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; COGs: COG0536 GTPase; HAMAP: GTP-binding protein Obg/CgtA; InterPro IPR006169:IPR002917:IPR014100; KEGG: fbc:FB2170_02650 putative Spo0B-related GTP-binding protein; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related; SPTR: GTPase obg; TIGRFAM: GTP-binding protein Obg/CgtA; GTPase ObgE 752975 11053519 Murru_0707 Muricauda ruestringensis DSM 13258 GTPase ObgE YP_004787179.1 751974 R 886377 CDS YP_004787180.1 344202037 11053520 complement(753010..754116) 1 NC_015945.1 PFAM: Phosphoribosyl transferase domain; Adenylate kinase; TIGRFAM: hypoxanthine phosphoribosyltransferase; COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; HAMAP: Adenylate kinase; InterPro IPR000836:IPR000850:IPR005904:IPR006259; KEGG: fbc:FB2170_02655 adenylate kinase; PFAM: Adenylate kinase; Phosphoribosyltransferase; PRIAM: Hypoxanthine phosphoribosyltransferase., Adenylate kinase; SPTR: Adenylate kinase; TIGRFAM: Adenylate kinase, subfamily; Hypoxanthine phosphoribosyl transferase; adenylate kinase 754116 11053520 Murru_0708 Muricauda ruestringensis DSM 13258 adenylate kinase YP_004787180.1 753010 R 886377 CDS YP_004787181.1 344202038 11053521 754234..755388 1 NC_015945.1 PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein; COGs: COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase); InterPro IPR003135:IPR005875; KEGG: fbc:FB2170_02660 phosphoribosylaminoimidazole carboxylase; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; PRIAM: Phosphoribosylaminoimidazole carboxylase; SPTR: Phosphoribosylaminoimidazole carboxylase; TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; phosphoribosylaminoimidazole carboxylase ATPase subunit 755388 11053521 Murru_0709 Muricauda ruestringensis DSM 13258 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_004787181.1 754234 D 886377 CDS YP_004787182.1 344202039 11053522 755392..755883 1 NC_015945.1 PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein; COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; InterPro IPR000031; KEGG: fbc:FB2170_02665 phosphoribosylaminoimidazole carboxylase catalytic subunit; PFAM: Phosphoribosylaminoimidazole carboxylase, core; PRIAM: Phosphoribosylaminoimidazole carboxylase; SPTR: Phosphoribosylaminoimidazole carboxylase catalytic subunit; TIGRFAM: Phosphoribosylaminoimidazole carboxylase, core; phosphoribosylaminoimidazole carboxylase catalytic subunit 755883 11053522 Murru_0710 Muricauda ruestringensis DSM 13258 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_004787182.1 755392 D 886377 CDS YP_004787183.1 344202040 11053523 755907..756299 1 NC_015945.1 hypothetical protein 756299 11053523 Murru_0711 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787183.1 755907 D 886377 CDS YP_004787184.1 344202041 11053524 756305..758326 1 NC_015945.1 PFAM: Peptidase family M3; COGs: COG0339 Zn-dependent oligopeptidase; InterPro IPR001567; KEGG: fbc:FB2170_02670 putative peptidyl-dipeptidase; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; PRIAM: Oligopeptidase A; SPTR: Putative peptidyl-dipeptidase; oligopeptidase A 758326 11053524 Murru_0712 Muricauda ruestringensis DSM 13258 oligopeptidase A YP_004787184.1 756305 D 886377 CDS YP_004787185.1 344202042 11053525 758476..760335 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR013767:IPR013655:IPR003594:IPR000014:IPR 001610; KEGG: chu:CHU_3217 two-component sensor histidine kinase; PFAM: PAS fold-3; PAS fold; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; PAC motif; PAS; SPTR: Two-component sensor histidine kinase; TIGRFAM: PAS; PAS/PAC sensor signal transduction histidine kinase 760335 11053525 Murru_0713 Muricauda ruestringensis DSM 13258 PAS/PAC sensor signal transduction histidine kinase YP_004787185.1 758476 D 886377 CDS YP_004787186.1 344202043 11053526 760348..760746 1 NC_015945.1 PFAM: Response regulator receiver domain; InterPro IPR001789; KEGG: cpi:Cpin_5595 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Response regulator receiver protein; response regulator receiver 760746 11053526 Murru_0714 Muricauda ruestringensis DSM 13258 response regulator receiver YP_004787186.1 760348 D 886377 CDS YP_004787187.1 344202044 11053527 760959..761513 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-70 factor, TIGR02943 family; RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: fbc:FB2170_02680 RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 761513 11053527 Murru_0715 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004787187.1 760959 D 886377 CDS YP_004787188.1 344202045 11053528 761516..761746 1 NC_015945.1 KEGG: fbc:FB2170_02685 glycine dehydrogenase; SPTR: Glycine dehydrogenase; glycine dehydrogenase 761746 11053528 Murru_0716 Muricauda ruestringensis DSM 13258 glycine dehydrogenase YP_004787188.1 761516 D 886377 CDS YP_004787189.1 344202046 11053529 complement(761743..762567) 1 NC_015945.1 KEGG: fbc:FB2170_02690 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 762567 11053529 Murru_0717 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787189.1 761743 R 886377 CDS YP_004787190.1 344202047 11053530 762588..765545 1 NC_015945.1 PFAM: Glycine cleavage system P-protein; TIGRFAM: glycine dehydrogenase (decarboxylating); COGs: COG1003 Glycine cleavage system protein P (pyridoxal-binding) C-terminal domain; HAMAP: Glycine cleavage system P protein, homodimeric; InterPro IPR020580:IPR003437; KEGG: fbc:FB2170_02695 glycine dehydrogenase; PFAM: Glycine cleavage system P-protein, N-terminal; SPTR: Glycine dehydrogenase [decarboxylating]; TIGRFAM: Glycine cleavage system P protein, homodimeric; glycine dehydrogenase 765545 11053530 Murru_0718 Muricauda ruestringensis DSM 13258 glycine dehydrogenase YP_004787190.1 762588 D 886377 CDS YP_004787191.1 344202048 11053531 765714..766772 1 NC_015945.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterPro IPR013751:IPR013747; KEGG: fbc:FB2170_02700 3-oxoacyl-(acyl carrier protein) synthase; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase III; SPTR: 3-oxoacyl-(Acyl carrier protein) synthase; beta-ketoacyl-acyl-carrier-protein synthase III 766772 11053531 Murru_0719 Muricauda ruestringensis DSM 13258 beta-ketoacyl-acyl-carrier-protein synthase III YP_004787191.1 765714 D 886377 CDS YP_004787192.1 344202049 11053532 767479..768003 1 NC_015945.1 KEGG: fbc:FB2170_02705 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 768003 11053532 Murru_0720 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787192.1 767479 D 886377 CDS YP_004787193.1 344202050 11053533 768189..769034 1 NC_015945.1 PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: gfo:GFO_2879 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2; family 2 glycosyl transferase 769034 11053533 Murru_0721 Muricauda ruestringensis DSM 13258 family 2 glycosyl transferase YP_004787193.1 768189 D 886377 CDS YP_004787194.1 344202051 11053534 769181..769930 1 NC_015945.1 KEGG: fnu:FN0653 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 769930 11053534 Murru_0722 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787194.1 769181 D 886377 CDS YP_004787195.1 344202052 11053535 770081..770848 1 NC_015945.1 KEGG: fnu:FN0653 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 770848 11053535 Murru_0723 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787195.1 770081 D 886377 CDS YP_004787196.1 344202053 11053536 770958..771872 1 NC_015945.1 PFAM: Tetratricopeptide repeat; InterPro IPR001440:IPR013105:IPR019734; KEGG: cyc:PCC7424_1361 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: TPR repeat-containing protein; hypothetical protein 771872 11053536 Murru_0724 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787196.1 770958 D 886377 CDS YP_004787197.1 344202054 11053537 complement(771885..773555) 1 NC_015945.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; InterPro IPR002591; KEGG: fbc:FB2170_17301 putative alkaline phosphatase; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR: Putative alkaline phosphatase; type I phosphodiesterase/nucleotide pyrophosphatase 773555 11053537 Murru_0725 Muricauda ruestringensis DSM 13258 type I phosphodiesterase/nucleotide pyrophosphatase YP_004787197.1 771885 R 886377 CDS YP_004787198.1 344202055 11053538 773625..774410 1 NC_015945.1 PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: rbi:RB2501_09685 hypothetical protein; PFAM: Domain of unknown function DUF140; SPTR: Putative uncharacterized protein; hypothetical protein 774410 11053538 Murru_0726 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787198.1 773625 D 886377 CDS YP_004787199.1 344202056 11053539 774410..775177 1 NC_015945.1 PFAM: ABC transporter; COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003439:IPR003593; KEGG: fbc:FB2170_17311 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; Fe(3+)-transporting ATPase 775177 11053539 Murru_0727 Muricauda ruestringensis DSM 13258 Fe(3+)-transporting ATPase YP_004787199.1 774410 D 886377 CDS YP_004787200.1 344202057 11053540 complement(775522..776979) 1 NC_015945.1 PFAM: Domain of unknown function (DUF389); TIGRFAM: uncharacterized hydrophobic domain; COGs: COG1808 membrane protein; InterPro IPR005240; KEGG: rbi:RB2501_09675 putative integral membrane protein; PFAM: Protein of unknown function DUF389; SPTR: Putative integral membrane protein; hypothetical protein 776979 11053540 Murru_0728 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787200.1 775522 R 886377 CDS YP_004787201.1 344202058 11053541 complement(776983..778062) 1 NC_015945.1 PFAM: Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR005835; KEGG: fbc:FB2170_17321 putative mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; PRIAM: Mannose-1-phosphate guanylyltransferase; SPTR: Putative mannose-1-phosphate guanylyltransferase; mannose-1-phosphate guanylyltransferase 778062 11053541 Murru_0729 Muricauda ruestringensis DSM 13258 mannose-1-phosphate guanylyltransferase YP_004787201.1 776983 R 886377 CDS YP_004787202.1 344202059 11053542 complement(778174..778773) 1 NC_015945.1 PFAM: SprT-like family; KEGG: fbc:FB2170_17326 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 778773 11053542 Murru_0730 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787202.1 778174 R 886377 CDS YP_004787203.1 344202060 11053543 complement(778821..779498) 1 NC_015945.1 PFAM: short chain dehydrogenase; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: fbc:FB2170_17351 short-chain dehydrogenase/reductase family oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Oxidoreductase, short-chain dehydrogenase/reductase family protein; short-chain dehydrogenase/reductase SDR 779498 11053543 Murru_0731 Muricauda ruestringensis DSM 13258 short-chain dehydrogenase/reductase SDR YP_004787203.1 778821 R 886377 CDS YP_004787204.1 344202061 11053544 complement(779591..780580) 1 NC_015945.1 PFAM: Peptidase family M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: fbc:FB2170_17356 putative peptidase, M28 family protein; PFAM: Peptidase M28; SPTR: Putative peptidase, M28 family protein; peptidase M28 780580 11053544 Murru_0732 Muricauda ruestringensis DSM 13258 peptidase M28 YP_004787204.1 779591 R 886377 CDS YP_004787205.1 344202062 11053545 complement(780692..782326) 1 NC_015945.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089:IPR004167:IPR001078:IPR006257; KEGG: fbc:FB2170_17361 dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; SPTR: Dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex; TIGRFAM: Dihydrolipoamide acetyltransferase, long form; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 782326 11053545 Murru_0733 Muricauda ruestringensis DSM 13258 pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase YP_004787205.1 780692 R 886377 CDS YP_004787206.1 344202063 11053546 complement(782331..783329) 1 NC_015945.1 PFAM: Dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, alpha subunit; COGs: COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type alpha subunit; InterPro IPR001017:IPR017597; KEGG: rbi:RB2501_09640 pyruvate dehydrogenase E1 component subunit alpha; PFAM: Dehydrogenase, E1 component; PRIAM: Pyruvate dehydrogenase (acetyl-transferring); SPTR: Pyruvate dehydrogenase E1 component, alpha subunit; TIGRFAM: Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha 783329 11053546 Murru_0734 Muricauda ruestringensis DSM 13258 pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha YP_004787206.1 782331 R 886377 CDS YP_004787207.1 344202064 11053547 complement(783411..783902) 1 NC_015945.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric; COGs: COG0295 Cytidine deaminase; InterPro IPR002125:IPR006262; KEGG: fbc:FB2170_17371 cytidine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: Cytidine deaminase; TIGRFAM: Cytidine deaminase, homotetrameric; cytidine deaminase 783902 11053547 Murru_0735 Muricauda ruestringensis DSM 13258 cytidine deaminase YP_004787207.1 783411 R 886377 CDS YP_004787208.1 344202065 11053548 complement(783977..785122) 1 NC_015945.1 KEGG: fbc:FB2170_17381 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 785122 11053548 Murru_0736 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787208.1 783977 R 886377 CDS YP_004787209.1 344202066 11053549 785517..787166 1 NC_015945.1 PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldJ; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532:IPR019865; KEGG: fbc:FB2170_17391 lipoprotein; PFAM: Sulphatase-modifying factor; SPTR: Lipoprotein, putative; TIGRFAM: Gliding motility-associated lipoprotein GldJ; gliding motility-associated lipoprotein GldJ 787166 11053549 Murru_0737 Muricauda ruestringensis DSM 13258 gliding motility-associated lipoprotein GldJ YP_004787209.1 785517 D 886377 CDS YP_004787210.1 344202067 11053550 787239..788507 1 NC_015945.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase; InterPro IPR000713:IPR013221:IPR004101:IPR005863; KEGG: fbc:FB2170_17396 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate- D-alanyl-D -alanyl ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; PRIAM:UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-a lanineligase; SPTR:UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-al anineligase; TIGRFAM: UDP-MurNAc-pentapeptide synthetase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanyl ligase 788507 11053550 Murru_0738 Muricauda ruestringensis DSM 13258 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanyl ligase YP_004787210.1 787239 D 886377 CDS YP_004787211.1 344202068 11053551 complement(788528..788767) 1 NC_015945.1 PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: chu:CHU_2935 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; helix-turn-helix domain-containing protein 788767 11053551 Murru_0739 Muricauda ruestringensis DSM 13258 helix-turn-helix domain-containing protein YP_004787211.1 788528 R 886377 CDS YP_004787212.1 344202069 11053552 788897..789058 1 NC_015945.1 hypothetical protein 789058 11053552 Murru_0740 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787212.1 788897 D 886377 CDS YP_004787213.1 344202070 11053554 complement(789167..789580) 1 NC_015945.1 PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: 6-pyruvoyl tetrahydropterin synthase/QueD family protein; COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: dfe:Dfer_0467 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; PFAM: 6-pyruvoyl tetrahydropterin synthase-related; SPTR: Putative uncharacterized protein; hypothetical protein 789580 11053554 Murru_0741 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787213.1 789167 R 886377 CDS YP_004787214.1 344202071 11053555 789750..790433 1 NC_015945.1 PFAM: Metallo-beta-lactamase superfamily; COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; HAMAP: Uncharacterised protein family UPF0173, metal-dependent hydrolase; InterPro IPR001279:IPR022877; KEGG: gfo:GFO_2312 metallo-beta-lactamase domain-containing protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: UPF0173 metal-dependent hydrolase M23134_04293; metal-dependent hydrolase 790433 11053555 Murru_0742 Muricauda ruestringensis DSM 13258 metal-dependent hydrolase YP_004787214.1 789750 D 886377 CDS YP_004787215.1 344202072 11053556 791010..792737 1 NC_015945.1 KEGG: cpi:Cpin_1033 TPR repeat-containing protein; SPTR: Tetratricopeptide repeat domain protein; hypothetical protein 792737 11053556 Murru_0743 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787215.1 791010 D 886377 CDS YP_004787216.1 344202073 11053557 792929..793489 1 NC_015945.1 KEGG: fbc:FB2170_04930 nicotinic acid mononucleotide adenyltransferase; SPTR: Nicotinic acid mononucleotide adenyltransferase; hypothetical protein 793489 11053557 Murru_0744 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787216.1 792929 D 886377 CDS YP_004787217.1 344202074 11053559 793791..794174 1 NC_015945.1 hypothetical protein 794174 11053559 Murru_0746 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787217.1 793791 D 886377 CDS YP_004787218.1 344202075 11053560 complement(794143..795300) 1 NC_015945.1 KEGG: ote:Oter_2274 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 795300 11053560 Murru_0747 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787218.1 794143 R 886377 CDS YP_004787219.1 344202076 11053561 complement(795322..798564) 1 NC_015945.1 PFAM: PKD domain; InterPro IPR000601; KEGG: fjo:Fjoh_1123 PKD domain-containing protein; PFAM: PKD domain; SPTR: PKD domain containing protein; PKD domain-containing protein 798564 11053561 Murru_0748 Muricauda ruestringensis DSM 13258 PKD domain-containing protein YP_004787219.1 795322 R 886377 CDS YP_004787220.1 344202077 11053562 complement(798682..798978) 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 798978 11053562 Murru_0749 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787220.1 798682 R 886377 CDS YP_004787221.1 344202078 11053563 complement(799004..799249) 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 799249 11053563 Murru_0750 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787221.1 799004 R 886377 CDS YP_004787222.1 344202079 11053564 complement(799321..800298) 1 NC_015945.1 PFAM: Integrase core domain; COGs: COG2801 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: lby:Lbys_0529 integrase catalytic region; PFAM: Integrase, catalytic core; SPTR: Helix-turn-helix, Fis-type protein; integrase catalytic subunit 800298 11053564 Murru_0751 Muricauda ruestringensis DSM 13258 integrase catalytic subunit YP_004787222.1 799321 R 886377 CDS YP_004787223.1 344202080 11053565 complement(800313..800660) 1 NC_015945.1 PFAM: Transposase; InterPro IPR002514; KEGG: mch:Mchl_5506 transposase IS3/IS911 family protein; PFAM: Transposase IS3/IS911family; SPTR: Transposase subfamily protein; transposase IS3/IS911 family protein 800660 11053565 Murru_0752 Muricauda ruestringensis DSM 13258 transposase IS3/IS911 family protein YP_004787223.1 800313 R 886377 CDS YP_004787224.1 344202081 11053566 complement(800746..801042) 1 NC_015945.1 KEGG: pdi:BDI_2138 integrase; SPTR: Tyrosine type site-specific recombinase; integrase 801042 11053566 Murru_0753 Muricauda ruestringensis DSM 13258 integrase YP_004787224.1 800746 R 886377 CDS YP_004787225.1 344202082 11053568 complement(801419..802630) 1 NC_015945.1 PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR013221:IPR001645; KEGG: fbc:FB2170_17411 folylpolyglutamate synthase; PFAM: Mur ligase, central; PRIAM: Tetrahydrofolate synthase; SPTR: Folylpolyglutamate synthase; TIGRFAM: Folylpolyglutamate synthetase; bifunctional folylpolyglutamate synthase/dihydrofolate synthase 802630 11053568 Murru_0754 Muricauda ruestringensis DSM 13258 bifunctional folylpolyglutamate synthase/dihydrofolate synthase YP_004787225.1 801419 R 886377 CDS YP_004787226.1 344202083 11053569 complement(802630..803514) 1 NC_015945.1 KEGG: fbc:FB2170_17416 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 803514 11053569 Murru_0755 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787226.1 802630 R 886377 CDS YP_004787227.1 344202084 11053570 complement(803514..803900) 1 NC_015945.1 PFAM: Biopolymer transport protein ExbD/TolR; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: rbi:RB2501_09385 putative tansport related protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative tansport related protein; biopolymer transport protein ExbD/TolR 803900 11053570 Murru_0756 Muricauda ruestringensis DSM 13258 biopolymer transport protein ExbD/TolR YP_004787227.1 803514 R 886377 CDS YP_004787228.1 344202085 11053571 complement(803911..804603) 1 NC_015945.1 PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: fbc:FB2170_17426 putative biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Putative biopolymer transport protein; MotA/TolQ/ExbB proton channel 804603 11053571 Murru_0757 Muricauda ruestringensis DSM 13258 MotA/TolQ/ExbB proton channel YP_004787228.1 803911 R 886377 CDS YP_004787229.1 344202086 11053572 complement(804662..806050) 1 NC_015945.1 PFAM: Citrate transporter; COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR004680; KEGG: rbi:RB2501_09375 putative Na+/H+ antiporter; PFAM: Divalent ion symporter; SPTR: Sodium:proton antiporter; citrate transporter 806050 11053572 Murru_0758 Muricauda ruestringensis DSM 13258 citrate transporter YP_004787229.1 804662 R 886377 CDS YP_004787230.1 344202087 11053573 806288..807430 1 NC_015945.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: fbc:FB2170_17441 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; PRIAM: Butyryl-CoA dehydrogenase; SPTR: Acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase 807430 11053573 Murru_0759 Muricauda ruestringensis DSM 13258 butyryl-CoA dehydrogenase YP_004787230.1 806288 D 886377 CDS YP_004787231.1 344202088 11053574 807735..812243 1 NC_015945.1 PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583:IPR006982:IPR002932:IPR002489; KEGG: fbc:FB2170_17446 glutamate synthase; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; PRIAM: Glutamate synthase (ferredoxin); SPTR: Glutamate synthase (Ferredoxin); glutamate synthase 812243 11053574 Murru_0760 Muricauda ruestringensis DSM 13258 glutamate synthase YP_004787231.1 807735 D 886377 CDS YP_004787232.1 344202089 11053575 812252..813718 1 NC_015945.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027:IPR006005; KEGG: rbi:RB2501_09355 NADPH-dependent glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Glutamate synthase (NADPH); SPTR: NADPH-dependent glutamate synthase, small subunit; TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 1; glutamate synthase NADH/NADPH small subunit 813718 11053575 Murru_0761 Muricauda ruestringensis DSM 13258 glutamate synthase NADH/NADPH small subunit YP_004787232.1 812252 D 886377 CDS YP_004787233.1 344202090 11053576 813951..814892 1 NC_015945.1 KEGG: rbi:RB2501_09335 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 814892 11053576 Murru_0762 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787233.1 813951 D 886377 CDS YP_004787234.1 344202091 11053582 complement(820483..822552) 1 NC_015945.1 KEGG: fbc:FB2170_08984 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 822552 11053582 Murru_0763 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787234.1 820483 R 886377 CDS YP_004787235.1 344202092 11053583 complement(822653..824131) 1 NC_015945.1 PFAM: SusD family; InterPro IPR012944; KEGG: ran:Riean_0046 hypothetical protein; PFAM: RagB/SusD; SPTR: Putative uncharacterized protein; RagB/SusD domain-containing protein 824131 11053583 Murru_0764 Muricauda ruestringensis DSM 13258 RagB/SusD domain-containing protein YP_004787235.1 822653 R 886377 CDS YP_004787236.1 344202093 11053584 complement(824143..827376) 1 NC_015945.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: gfo:GFO_2844 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB dependent/ligand-gated channel; TonB-dependent receptor plug 827376 11053584 Murru_0765 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004787236.1 824143 R 886377 CDS YP_004787237.1 344202094 11053585 827610..828206 1 NC_015945.1 PFAM: Ribonuclease HII; COGs: COG0164 Ribonuclease HII; InterPro IPR001352; KEGG: fbc:FB2170_08979 ribonuclease HII; PFAM: Ribonuclease HII/HIII; PRIAM: Ribonuclease H; SPTR: Ribonuclease HII; ribonuclease H 828206 11053585 Murru_0766 Muricauda ruestringensis DSM 13258 ribonuclease H YP_004787237.1 827610 D 886377 CDS YP_004787238.1 344202095 11053586 828236..830692 1 NC_015945.1 KEGG: fbc:FB2170_08974 ribonuclease HII; SPTR: Ribonuclease HII; ribonuclease HII 830692 11053586 Murru_0767 Muricauda ruestringensis DSM 13258 ribonuclease HII YP_004787238.1 828236 D 886377 CDS YP_004787239.1 344202096 11053587 830816..832129 1 NC_015945.1 PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: rbi:RB2501_09300 outer membrane protein-like peptidoglycan-associated (LipO)protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: Outer membrane protein-like peptidoglycan-associated (Lipo)protein; OmpA/MotB domain-containing protein 832129 11053587 Murru_0768 Muricauda ruestringensis DSM 13258 OmpA/MotB domain-containing protein YP_004787239.1 830816 D 886377 CDS YP_004787240.1 344202097 11053588 832136..832828 1 NC_015945.1 KEGG: fbc:FB2170_08969 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 832828 11053588 Murru_0769 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787240.1 832136 D 886377 CDS YP_004787241.1 344202098 11053589 complement(833003..833830) 1 NC_015945.1 KEGG: shw:Sputw3181_2134 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 833830 11053589 Murru_0770 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787241.1 833003 R 886377 CDS YP_004787242.1 344202099 11053590 complement(834244..834783) 1 NC_015945.1 hypothetical protein 834783 11053590 Murru_0771 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787242.1 834244 R 886377 CDS YP_004787243.1 344202100 11053591 complement(834854..835315) 1 NC_015945.1 hypothetical protein 835315 11053591 Murru_0772 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787243.1 834854 R 886377 CDS YP_004787244.1 344202101 11053592 complement(835393..836022) 1 NC_015945.1 KEGG: fps:FP2138 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 836022 11053592 Murru_0773 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787244.1 835393 R 886377 CDS YP_004787245.1 344202102 11053593 836052..836198 1 NC_015945.1 hypothetical protein 836198 11053593 Murru_0774 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787245.1 836052 D 886377 CDS YP_004787246.1 344202103 11053594 complement(836441..837127) 1 NC_015945.1 KEGG: mtt:Ftrac_3797 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 837127 11053594 Murru_0775 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787246.1 836441 R 886377 CDS YP_004787247.1 344202104 11053595 complement(837277..837993) 1 NC_015945.1 PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B; COGs: COG0321 Lipoate-protein ligase B; HAMAP: Octanoyltransferase; InterPro IPR004143:IPR000544; KEGG: fbc:FB2170_08964 lipoate-protein ligase B; PFAM: Biotin/lipoate A/B protein ligase; PRIAM: Lipoyl(octanoyl) transferase; SPTR: Octanoyltransferase; TIGRFAM: Octanoyltransferase; Octanoyltransferase 837993 11053595 Murru_0776 Muricauda ruestringensis DSM 13258 Octanoyltransferase YP_004787247.1 837277 R 886377 CDS YP_004787248.1 344202105 11053596 complement(838026..838763) 1 NC_015945.1 KEGG: fbc:FB2170_08959 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 838763 11053596 Murru_0777 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787248.1 838026 R 886377 CDS YP_004787249.1 344202106 11053597 complement(838771..838926) 1 NC_015945.1 PFAM: Uncharacterized protein family UPF0057; KEGG: cat:CA2559_05515 hypothetical protein; SPTR: Ric1 protein; manually curated; hypothetical protein 838926 11053597 Murru_0778 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787249.1 838771 R 886377 CDS YP_004787250.1 344202107 11053598 839020..840063 1 NC_015945.1 PFAM: Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792; KEGG: bmd:BMD_1419 two-component response regulator LiaR; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: DNA-binding response regulator; LuxR family transcriptional regulator 840063 11053598 Murru_0779 Muricauda ruestringensis DSM 13258 LuxR family transcriptional regulator YP_004787250.1 839020 D 886377 CDS YP_004787251.1 344202108 11053599 840163..840705 1 NC_015945.1 PFAM: Thioredoxin; InterPro IPR013766; KEGG: fbc:FB2170_05425 hypothetical protein; PFAM: Thioredoxin domain; SPTR: Putative uncharacterized protein; thioredoxin domain-containing protein 840705 11053599 Murru_0780 Muricauda ruestringensis DSM 13258 thioredoxin domain-containing protein YP_004787251.1 840163 D 886377 CDS YP_004787252.1 344202109 11053600 840771..842462 1 NC_015945.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase, class II; InterPro IPR004365:IPR004364:IPR002313; KEGG: fbc:FB2170_08944 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; PRIAM: Lysine--tRNA ligase; SPTR: Lysyl-tRNA synthetase; TIGRFAM: Lysyl-tRNA synthetase, class II; lysyl-tRNA synthetase 842462 11053600 Murru_0781 Muricauda ruestringensis DSM 13258 lysyl-tRNA synthetase YP_004787252.1 840771 D 886377 CDS YP_004787253.1 344202110 11053601 842622..845711 1 NC_015945.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: ran:Riean_1607 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Ferric enterobactin receptor; TonB-dependent receptor plug 845711 11053601 Murru_0782 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004787253.1 842622 D 886377 CDS YP_004787254.1 344202111 11053602 845922..847352 1 NC_015945.1 PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: fbc:FB2170_08919 anion transporter; PFAM: Sodium/sulphate symporter; SPTR: Anion transporter; TIGRFAM: Sodium/sulphate symporter; anion transporter 847352 11053602 Murru_0783 Muricauda ruestringensis DSM 13258 anion transporter YP_004787254.1 845922 D 886377 CDS YP_004787255.1 344202112 11053603 complement(847515..847628) 1 NC_015945.1 hypothetical protein 847628 11053603 Murru_0784 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787255.1 847515 R 886377 CDS YP_004787256.1 344202113 11053604 complement(847798..848520) 1 NC_015945.1 KEGG: fbc:FB2170_15618 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 848520 11053604 Murru_0785 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787256.1 847798 R 886377 CDS YP_004787257.1 344202114 11053605 848787..851288 1 NC_015945.1 KEGG: cat:CA2559_05500 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 851288 11053605 Murru_0786 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787257.1 848787 D 886377 CDS YP_004787258.1 344202115 11053606 851450..851644 1 NC_015945.1 hypothetical protein 851644 11053606 Murru_0787 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787258.1 851450 D 886377 CDS YP_004787259.1 344202116 11053607 852256..852855 1 NC_015945.1 KEGG: kko:Kkor_1792 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 852855 11053607 Murru_0788 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787259.1 852256 D 886377 CDS YP_004787260.1 344202117 11053608 852852..853577 1 NC_015945.1 PFAM: Protein of unknown function (DUF3307); KEGG: mtt:Ftrac_1036 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 853577 11053608 Murru_0789 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787260.1 852852 D 886377 CDS YP_004787261.1 344202118 11053609 complement(853764..854318) 1 NC_015945.1 PFAM: FMN-binding domain; InterPro IPR007329; KEGG: fbc:FB2170_00970 FMN-binding protein; PFAM: FMN-binding; SMART: FMN-binding; SPTR: FMN-binding protein; FMN-binding domain-containing protein 854318 11053609 Murru_0790 Muricauda ruestringensis DSM 13258 FMN-binding domain-containing protein YP_004787261.1 853764 R 886377 CDS YP_004787262.1 344202119 11053610 complement(854302..855228) 1 NC_015945.1 KEGG: rbi:RB2501_09440 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 855228 11053610 Murru_0791 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787262.1 854302 R 886377 CDS YP_004787263.1 344202120 11053611 855334..857499 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: zpr:ZPR_0402 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent outer membrane receptor; TonB-dependent receptor plug 857499 11053611 Murru_0792 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004787263.1 855334 D 886377 CDS YP_004787264.1 344202121 11053612 857505..859031 1 NC_015945.1 KEGG: zpr:ZPR_0403 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 859031 11053612 Murru_0793 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787264.1 857505 D 886377 CDS YP_004787265.1 344202122 11053613 859450..859845 1 NC_015945.1 PFAM: ArsC family; KEGG: rbi:RB2501_14744 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 859845 11053613 Murru_0794 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787265.1 859450 D 886377 CDS YP_004787266.1 344202123 11053614 860121..860252 1 NC_015945.1 KEGG: pmz:HMPREF0659_A7232 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 860252 11053614 Murru_0795 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787266.1 860121 D 886377 CDS YP_004787267.1 344202124 11053615 860332..860943 1 NC_015945.1 KEGG: mmh:Mmah_0474 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 860943 11053615 Murru_0796 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787267.1 860332 D 886377 CDS YP_004787268.1 344202125 11053616 complement(861082..861291) 1 NC_015945.1 hypothetical protein 861291 11053616 Murru_0797 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787268.1 861082 R 886377 CDS YP_004787269.1 344202126 11053617 861451..861645 1 NC_015945.1 PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: cpi:Cpin_2560 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; helix-turn-helix domain-containing protein 861645 11053617 Murru_0798 Muricauda ruestringensis DSM 13258 helix-turn-helix domain-containing protein YP_004787269.1 861451 D 886377 CDS YP_004787270.1 344202127 11053618 complement(861912..862232) 1 NC_015945.1 KEGG: fbc:FB2170_03415 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 862232 11053618 Murru_0799 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787270.1 861912 R 886377 CDS YP_004787271.1 344202128 11053619 complement(862484..863761) 1 NC_015945.1 PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; HAMAP: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; InterPro IPR005814:IPR004639; KEGG: fbc:FB2170_08894 glutamate-1-semialdehyde 2,1-aminomutase; PFAM: Aminotransferase class-III; PRIAM: Glutamate-1-semialdehyde 2,1-aminomutase; SPTR: Glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; glutamate-1-semialdehyde 2,1-aminomutase 863761 11053619 Murru_0800 Muricauda ruestringensis DSM 13258 glutamate-1-semialdehyde 2,1-aminomutase YP_004787271.1 862484 R 886377 CDS YP_004787272.1 344202129 11053620 complement(864571..865419) 1 NC_015945.1 PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; LysM domain; COGs: COG1705 Muramidase (flagellum-specific); InterPro IPR002901:IPR018392:IPR013338:IPR002482; KEGG: fbc:FB2170_08889 hemagglutinin; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Peptidoglycan-binding lysin domain; SMART: Lysozyme domain, subfamily 2; Peptidoglycan-binding Lysin subgroup; SPTR: Hemagglutinin; mannosyl-glycoprotein endo-beta-N-acetylglucosamidase 865419 11053620 Murru_0801 Muricauda ruestringensis DSM 13258 mannosyl-glycoprotein endo-beta-N-acetylglucosamidase YP_004787272.1 864571 R 886377 CDS YP_004787273.1 344202130 11053621 complement(865416..866321) 1 NC_015945.1 PFAM: Pyridoxal-phosphate dependent enzyme; COGs: COG2515 1-aminocyclopropane-1-carboxylate deaminase; KEGG: fjo:Fjoh_1912 1-aminocyclopropane-1-carboxylate deaminase-like protein; PRIAM: 1-aminocyclopropane-1-carboxylate deaminase; SPTR: 1-aminocyclopropane-1-carboxylate deaminase-like protein; 1-aminocyclopropane-1-carboxylate deaminase 866321 11053621 Murru_0802 Muricauda ruestringensis DSM 13258 1-aminocyclopropane-1-carboxylate deaminase YP_004787273.1 865416 R 886377 CDS YP_004787274.1 344202131 11053622 866426..866737 1 NC_015945.1 KEGG: fjo:Fjoh_1222 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 866737 11053622 Murru_0803 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787274.1 866426 D 886377 CDS YP_004787275.1 344202132 11053623 866734..867033 1 NC_015945.1 PFAM: Plasmid stabilisation system protein; KEGG: gfo:GFO_0929 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 867033 11053623 Murru_0804 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787275.1 866734 D 886377 CDS YP_004787276.1 344202133 11053624 complement(867068..867397) 1 NC_015945.1 KEGG: fbc:FB2170_08879 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 867397 11053624 Murru_0805 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787276.1 867068 R 886377 CDS YP_004787277.1 344202134 11053625 867631..867792 1 NC_015945.1 KEGG: gfo:GFO_0236 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 867792 11053625 Murru_0806 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787277.1 867631 D 886377 CDS YP_004787278.1 344202135 11053626 867853..868422 1 NC_015945.1 KEGG: fbc:FB2170_08869 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 868422 11053626 Murru_0807 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787278.1 867853 D 886377 CDS YP_004787279.1 344202136 11053627 868639..870390 1 NC_015945.1 PFAM: Biopterin-dependent aromatic amino acid hydroxylase; COGs: COG3186 Phenylalanine-4-hydroxylase; InterPro IPR019774; KEGG: rbi:RB2501_09225 phenylalanine 4-monooxygenase; PFAM: Aromatic amino acid hydroxylase, C-terminal; PRIAM: Phenylalanine 4-monooxygenase; SPTR: Putative uncharacterized protein; phenylalanine 4-monooxygenase 870390 11053627 Murru_0808 Muricauda ruestringensis DSM 13258 phenylalanine 4-monooxygenase YP_004787279.1 868639 D 886377 CDS YP_004787280.1 344202137 11053628 complement(870405..871019) 1 NC_015945.1 KEGG: rbi:RB2501_09215 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 871019 11053628 Murru_0809 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787280.1 870405 R 886377 CDS YP_004787281.1 344202138 11053629 complement(871016..871987) 1 NC_015945.1 PFAM: GSCFA family; InterPro IPR014982; KEGG: fbc:FB2170_08849 hypothetical protein; PFAM: GSCFA; SPTR: Putative uncharacterized protein; GSCFA domain-containing protein 871987 11053629 Murru_0810 Muricauda ruestringensis DSM 13258 GSCFA domain-containing protein YP_004787281.1 871016 R 886377 CDS YP_004787282.1 344202139 11053630 complement(872217..874829) 1 NC_015945.1 PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase; COGs: COG0013 Alanyl-tRNA synthetase; InterPro IPR018164:IPR012947:IPR003156:IPR002318; KEGG: fbc:FB2170_08839 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1; SMART: Threonyl/alanyl tRNA synthetase, SAD; SPTR: Alanyl-tRNA synthetase; TIGRFAM: Alanyl-tRNA synthetase, class IIc; alanyl-tRNA synthetase 874829 11053630 Murru_0811 Muricauda ruestringensis DSM 13258 alanyl-tRNA synthetase YP_004787282.1 872217 R 886377 CDS YP_004787283.1 344202140 11053631 874933..875910 1 NC_015945.1 PFAM: Peptidase family M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: fbc:FB2170_08834 putative peptidase; PFAM: Peptidase M23; SPTR: Putative peptidase; peptidase M23 875910 11053631 Murru_0812 Muricauda ruestringensis DSM 13258 peptidase M23 YP_004787283.1 874933 D 886377 CDS YP_004787284.1 344202141 11053632 875910..876239 1 NC_015945.1 PFAM: MerR family regulatory protein; InterPro IPR000551; KEGG: fbc:FB2170_08829 putative transcriptional regulator protein; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; SPTR: Putative transcriptional regulator protein; regulatory protein MerR 876239 11053632 Murru_0813 Muricauda ruestringensis DSM 13258 regulatory protein MerR YP_004787284.1 875910 D 886377 CDS YP_004787285.1 344202142 11053633 876259..876858 1 NC_015945.1 PFAM: LemA family; COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: cat:CA2559_04770 hypothetical protein; PFAM: LemA; SPTR: Putative uncharacterized protein; LemA family protein 876858 11053633 Murru_0814 Muricauda ruestringensis DSM 13258 LemA family protein YP_004787285.1 876259 D 886377 CDS YP_004787286.1 344202143 11053634 876862..877299 1 NC_015945.1 PFAM: Domain of unknown function (DUF477); COGs: COG3762 membrane protein; InterPro IPR007621; KEGG: fbc:FB2170_08819 hypothetical protein; PFAM: Protein of unknown function DUF477; SPTR: Putative uncharacterized protein; hypothetical protein 877299 11053634 Murru_0815 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787286.1 876862 D 886377 CDS YP_004787287.1 344202144 11053635 877301..878068 1 NC_015945.1 PFAM: Domain of unknown function (DUF477); COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: fbc:FB2170_08814 hypothetical protein; PFAM: Protein of unknown function DUF477; SPTR: Putative uncharacterized protein; hypothetical protein 878068 11053635 Murru_0816 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787287.1 877301 D 886377 CDS YP_004787288.1 344202145 11053636 878121..878600 1 NC_015945.1 hypothetical protein 878600 11053636 Murru_0817 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787288.1 878121 D 886377 CDS YP_004787289.1 344202146 11053637 878814..884375 1 NC_015945.1 PFAM: Alpha-macro-globulin thiol-ester bond-forming region; MG2 domain; Alpha-2-macroglobulin family; Alpha-2-macroglobulin family N-terminal region; Alpha-2-macroglobulin MG1 domain; COGs: COG2373 Large extracellular alpha-helical protein; InterPro IPR002890:IPR011625; KEGG: fbc:FB2170_06835 putative outer membrane protein; PFAM: Alpha-2-macroglobulin, N-terminal; Alpha-2-macroglobulin, N-terminal 2; SPTR: Putative outer membrane protein; alpha-2-macroglobulin domain-containing protein 884375 11053637 Murru_0818 Muricauda ruestringensis DSM 13258 alpha-2-macroglobulin domain-containing protein YP_004787289.1 878814 D 886377 CDS YP_004787290.1 344202147 11053638 884335..886758 1 NC_015945.1 PFAM: Penicillin-Binding Protein C-terminus Family; Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1C; COGs: COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC; InterPro IPR001264:IPR001460:IPR009647:IPR011815; KEGG: fbc:FB2170_06870 putative penicillin-binding protein; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; Penicillin-binding, C-terminal; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Putative penicillin-binding protein; TIGRFAM: Penicillin-binding protein 1C; penicillin-binding protein 1C 886758 11053638 Murru_0819 Muricauda ruestringensis DSM 13258 penicillin-binding protein 1C YP_004787290.1 884335 D 886377 CDS YP_004787291.1 344202148 11053639 886831..887595 1 NC_015945.1 COGs: COG3440 restriction endonuclease; KEGG: dly:Dehly_1381 putative restriction endonuclease; SPTR: Putative restriction endonuclease; putative restriction endonuclease 887595 11053639 Murru_0820 Muricauda ruestringensis DSM 13258 putative restriction endonuclease YP_004787291.1 886831 D 886377 CDS YP_004787292.1 344202149 11053641 complement(887835..889136) 1 NC_015945.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain; COGs: COG1160 GTPase; HAMAP: GTP-binding, EngA; InterPro IPR002917:IPR005225:IPR016484; KEGG: fbc:FB2170_08809 GTP-binding protein EngA; PFAM: GTP-binding protein, HSR1-related; SPTR: GTP-binding protein engA; TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; GTP-binding protein engA 889136 11053641 Murru_0822 Muricauda ruestringensis DSM 13258 GTP-binding protein engA YP_004787292.1 887835 R 886377 CDS YP_004787293.1 344202150 11053642 889213..889728 1 NC_015945.1 KEGG: fbc:FB2170_08804 GTP-binding protein EngA; SPTR: GTP-binding protein EngA; hypothetical protein 889728 11053642 Murru_0823 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787293.1 889213 D 886377 CDS YP_004787294.1 344202151 11053643 complement(889725..890606) 1 NC_015945.1 PFAM: GTPase of unknown function; KH domain; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain; COGs: COG1159 GTPase; HAMAP: GTP-binding protein Era; InterPro IPR002917:IPR004044:IPR005225:IPR005662; KEGG: fbc:FB2170_08799 putative GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2; SPTR: GTP-binding protein era homolog; TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; GTP-binding protein Era-like-protein 890606 11053643 Murru_0824 Muricauda ruestringensis DSM 13258 GTP-binding protein Era-like-protein YP_004787294.1 889725 R 886377 CDS YP_004787295.1 344202152 11053644 complement(890596..891960) 1 NC_015945.1 PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein; COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: rbi:RB2501_09165 sodium/alanine symporter; PFAM: Sodium:alanine symporter; SPTR: Sodium/alanine symporter; TIGRFAM: Sodium:alanine symporter; amino acid carrier protein 891960 11053644 Murru_0825 Muricauda ruestringensis DSM 13258 amino acid carrier protein YP_004787295.1 890596 R 886377 CDS YP_004787296.1 344202153 11053646 892432..893952 1 NC_015945.1 COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: rbi:RB2501_11087 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family protein; AraC family transcriptional regulator 893952 11053646 Murru_0826 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004787296.1 892432 D 886377 CDS YP_004787297.1 344202154 11053648 894876..898118 1 NC_015945.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_02545 putative outer membrane protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein, probably involved in nutrient binding; TonB-dependent receptor plug 898118 11053648 Murru_0828 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004787297.1 894876 D 886377 CDS YP_004787298.1 344202155 11053649 898149..899864 1 NC_015945.1 PFAM: SusD family; KEGG: fbc:FB2170_02550 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 899864 11053649 Murru_0829 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787298.1 898149 D 886377 CDS YP_004787299.1 344202156 11053650 899888..900688 1 NC_015945.1 KEGG: fbc:FB2170_01262 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 900688 11053650 Murru_0830 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787299.1 899888 D 886377 CDS YP_004787300.1 344202157 11053651 complement(900858..901142) 1 NC_015945.1 hypothetical protein 901142 11053651 Murru_0831 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787300.1 900858 R 886377 CDS YP_004787301.1 344202158 11053652 901189..902385 1 NC_015945.1 PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: gfo:GFO_0750 major facilitator superfamily permease arabinose polymer transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily permease-possibly arabinose polymer transporter; major facilitator superfamily protein 902385 11053652 Murru_0832 Muricauda ruestringensis DSM 13258 major facilitator superfamily protein YP_004787301.1 901189 D 886377 CDS YP_004787302.1 344202159 11053653 902477..903304 1 NC_015945.1 PFAM: Glycosyl hydrolases family 16; Putative secretory protein (DUF2401); COGs: COG2273 Beta-glucanase/Beta-glucan synthetase; InterPro IPR000757; KEGG: fbc:FB2170_09211 beta-glucanase; PFAM: Glycoside hydrolase, family 16; PRIAM: Glucan endo-1,3-beta-D-glucosidase; SPTR: Beta-glucanase; glucan endo-1,3-beta-D-glucosidase 903304 11053653 Murru_0833 Muricauda ruestringensis DSM 13258 glucan endo-1,3-beta-D-glucosidase YP_004787302.1 902477 D 886377 CDS YP_004787303.1 344202160 11053654 complement(903345..903527) 1 NC_015945.1 KEGG: zpr:ZPR_4140 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 903527 11053654 Murru_0834 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787303.1 903345 R 886377 CDS YP_004787304.1 344202161 11053655 complement(903531..904856) 1 NC_015945.1 PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fbc:FB2170_08734 putative outer membrane protein; PFAM: Outer membrane efflux protein; SPTR: Putative outer membrane protein TolC; outer membrane efflux protein 904856 11053655 Murru_0835 Muricauda ruestringensis DSM 13258 outer membrane efflux protein YP_004787304.1 903531 R 886377 CDS YP_004787305.1 344202162 11053656 complement(904856..908149) 1 NC_015945.1 PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: fbc:FB2170_08729 RND family efflux transporter; PFAM: Acriflavin resistance protein; SPTR: RND family efflux transporter; acriflavin resistance protein 908149 11053656 Murru_0836 Muricauda ruestringensis DSM 13258 acriflavin resistance protein YP_004787305.1 904856 R 886377 CDS YP_004787306.1 344202163 11053657 complement(908161..909282) 1 NC_015945.1 COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fbc:FB2170_08724 secretion protein HlyD; SPTR: Secretion protein HlyD; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 909282 11053657 Murru_0837 Muricauda ruestringensis DSM 13258 RND family efflux transporter MFP subunit YP_004787306.1 908161 R 886377 CDS YP_004787307.1 344202164 11053658 complement(909431..910318) 1 NC_015945.1 PFAM: Leucine Rich Repeat; InterPro IPR001611:IPR003591; KEGG: fbc:FB2170_08714 hypothetical protein; PFAM: Leucine-rich repeat; SPTR: Putative uncharacterized protein; hypothetical protein 910318 11053658 Murru_0838 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787307.1 909431 R 886377 CDS YP_004787308.1 344202165 11053659 complement(910454..912367) 1 NC_015945.1 PFAM: ABC transporter; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439:IPR003593; KEGG: fbc:FB2170_08709 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; ABC transporter-like protein 912367 11053659 Murru_0839 Muricauda ruestringensis DSM 13258 ABC transporter-like protein YP_004787308.1 910454 R 886377 CDS YP_004787309.1 344202166 11053660 912433..912834 1 NC_015945.1 KEGG: fbc:FB2170_08704 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 912834 11053660 Murru_0840 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787309.1 912433 D 886377 CDS YP_004787310.1 344202167 11053661 complement(912831..913886) 1 NC_015945.1 PFAM: FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: fbc:FB2170_08699 hypothetical protein; PFAM: FAD dependent oxidoreductase; SPTR: Putative uncharacterized protein; FAD dependent oxidoreductase 913886 11053661 Murru_0841 Muricauda ruestringensis DSM 13258 FAD dependent oxidoreductase YP_004787310.1 912831 R 886377 CDS YP_004787311.1 344202168 11053662 complement(914006..914908) 1 NC_015945.1 TIGRFAM: gliding motility associated protein GldN; InterPro IPR019847; KEGG: fbc:FB2170_08694 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Gliding motility associated protein GldN; gliding motility associated protein GldN 914908 11053662 Murru_0842 Muricauda ruestringensis DSM 13258 gliding motility associated protein GldN YP_004787311.1 914006 R 886377 CDS YP_004787312.1 344202169 11053663 complement(914935..916503) 1 NC_015945.1 PFAM: GldM C-terminal domain; GldM N-terminal domain; TIGRFAM: gliding motility-associated protein GldM; InterPro IPR019859; KEGG: fbc:FB2170_08689 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Gliding motility-associated protein GldM; gliding motility-associated protein GldM 916503 11053663 Murru_0843 Muricauda ruestringensis DSM 13258 gliding motility-associated protein GldM YP_004787312.1 914935 R 886377 CDS YP_004787313.1 344202170 11053664 complement(916572..917228) 1 NC_015945.1 TIGRFAM: gliding motility-associated protein GldL; InterPro IPR019852; KEGG: rbi:RB2501_09010 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Gliding motility-associated protein, GldL; gliding motility-associated protein GldL 917228 11053664 Murru_0844 Muricauda ruestringensis DSM 13258 gliding motility-associated protein GldL YP_004787313.1 916572 R 886377 CDS YP_004787314.1 344202171 11053665 complement(917321..918700) 1 NC_015945.1 PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldK; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532:IPR019866; KEGG: fbc:FB2170_08679 lipoprotein; PFAM: Sulphatase-modifying factor; SPTR: Lipoprotein, putative; TIGRFAM: Gliding motility-associated lipoprotein GldK; gliding motility-associated lipoprotein GldK 918700 11053665 Murru_0845 Muricauda ruestringensis DSM 13258 gliding motility-associated lipoprotein GldK YP_004787314.1 917321 R 886377 CDS YP_004787315.1 344202172 11053666 complement(918824..919981) 1 NC_015945.1 PFAM: Arginase family; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR006035; KEGG: fbc:FB2170_08674 hypothetical protein; PFAM: Ureohydrolase; SPTR: Putative uncharacterized protein; arginase/agmatinase/formiminoglutamase 919981 11053666 Murru_0846 Muricauda ruestringensis DSM 13258 arginase/agmatinase/formiminoglutamase YP_004787315.1 918824 R 886377 CDS YP_004787316.1 344202173 11053667 complement(919983..922469) 1 NC_015945.1 PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial; COGs: COG0550 Topoisomerase IA; InterProIPR006171:IPR013497:IPR005733:IPR003601:IPR 003602; KEGG: fbc:FB2170_08669 DNA topoisomerase I; PFAM: DNA topoisomerase, type IA, central; Toprim domain; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain; SPTR: DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial-type; DNA topoisomerase I 922469 11053667 Murru_0847 Muricauda ruestringensis DSM 13258 DNA topoisomerase I YP_004787316.1 919983 R 886377 CDS YP_004787317.1 344202174 11053668 922660..925797 1 NC_015945.1 PFAM: BNR/Asp-box repeat; InterPro IPR002860; KEGG: fbc:FB2170_08664 hypothetical protein; PFAM: BNR repeat; SPTR: Putative uncharacterized protein; glycosyl hydrolase family protein 925797 11053668 Murru_0848 Muricauda ruestringensis DSM 13258 glycosyl hydrolase family protein YP_004787317.1 922660 D 886377 CDS YP_004787318.1 344202175 11053669 complement(925862..926590) 1 NC_015945.1 KEGG: cat:CA2559_00710 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 926590 11053669 Murru_0849 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787318.1 925862 R 886377 CDS YP_004787319.1 344202176 11053670 926722..928185 1 NC_015945.1 PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family; COGs: COG0621 2-methylthioadenine synthetase; HAMAP: tRNA-i(6)A37 modification enzyme MiaB; InterProIPR013848:IPR007197:IPR002792:IPR005839:IPR 006463:IPR006638; KEGG: zpr:ZPR_4153 tRNA-i(6)A37 modification enzyme MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: tRNA-i(6)A37 modification enzyme MiaB; TIGRFAM: Methylthiotransferase; tRNA-i(6)A37 modification enzyme MiaB; (dimethylallyl)adenosine tRNA methylthiotransferase MiaB 928185 11053670 Murru_0850 Muricauda ruestringensis DSM 13258 (dimethylallyl)adenosine tRNA methylthiotransferase MiaB YP_004787319.1 926722 D 886377 CDS YP_004787320.1 344202177 11053671 928283..929563 1 NC_015945.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078:IPR002197:IPR003593; KEGG: fbc:FB2170_08614 transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; SPTR: Transcriptional regulator; Fis family sigma-54 specific transcriptional regulator 929563 11053671 Murru_0851 Muricauda ruestringensis DSM 13258 Fis family sigma-54 specific transcriptional regulator YP_004787320.1 928283 D 886377 CDS YP_004787321.1 344202178 11053672 929583..930110 1 NC_015945.1 KEGG: rbi:RB2501_08975 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 930110 11053672 Murru_0852 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787321.1 929583 D 886377 CDS YP_004787322.1 344202179 11053673 930117..931034 1 NC_015945.1 KEGG: fbc:FB2170_08604 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 931034 11053673 Murru_0853 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787322.1 930117 D 886377 CDS YP_004787323.1 344202180 11053674 931031..931393 1 NC_015945.1 PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit; COGs: COG1314 Preprotein translocase subunit SecG; InterPro IPR004692; KEGG: rbi:RB2501_08965 hypothetical protein; PFAM: Preprotein translocase SecG subunit; SPTR: Putative uncharacterized protein; TIGRFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG 931393 11053674 Murru_0854 Muricauda ruestringensis DSM 13258 preprotein translocase subunit SecG YP_004787323.1 931031 D 886377 CDS YP_004787324.1 344202181 11053675 931540..931818 1 NC_015945.1 PFAM: Chaperonin 10 Kd subunit; COGs: COG0234 Co-chaperonin GroES (HSP10); HAMAP: Chaperonin Cpn10; InterPro IPR020818; KEGG: fbc:FB2170_08594 co-chaperonin GroES; PFAM: Chaperonin Cpn10; SMART: Chaperonin Cpn10; SPTR: 10 kDa chaperonin; molecular chaperone GroES 931818 11053675 Murru_0855 Muricauda ruestringensis DSM 13258 molecular chaperone GroES YP_004787324.1 931540 D 886377 CDS YP_004787325.1 344202182 11053676 931920..933554 1 NC_015945.1 PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL; COGs: COG0459 Chaperonin GroEL (HSP60 family); HAMAP: Chaperonin Cpn60; InterPro IPR002423:IPR001844; KEGG: rbi:RB2501_08955 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1; SPTR: 60 kDa chaperonin; TIGRFAM: Chaperonin Cpn60; 60 kDa chaperonin 933554 11053676 Murru_0856 Muricauda ruestringensis DSM 13258 60 kDa chaperonin YP_004787325.1 931920 D 886377 CDS YP_004787326.1 344202183 11053677 complement(933991..935721) 1 NC_015945.1 PFAM: Protein of unknown function (DUF3347); TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: cat:CA2559_11703 putative cation efflux system transmembrane protein; SPTR: Putative cation efflux system transmembrane protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 935721 11053677 Murru_0857 Muricauda ruestringensis DSM 13258 RND family efflux transporter MFP subunit YP_004787326.1 933991 R 886377 CDS YP_004787327.1 344202184 11053678 complement(935726..936433) 1 NC_015945.1 KEGG: rbi:RB2501_00791 hypothetical protein; SPTR: Uncharacterized conserved secreted or membrane protein; hypothetical protein 936433 11053678 Murru_0858 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787327.1 935726 R 886377 CDS YP_004787328.1 344202185 11053679 complement(936441..938939) 1 NC_015945.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2217 Cation transport ATPase; InterProIPR006121:IPR008250:IPR005834:IPR006403:IPR 006416:IPR001757; KEGG: cat:CA2559_11723 heavy-metal transporting P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; PRIAM: Copper-exporting ATPase; SPTR: Heavy-metal transporting P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; heavy metal translocating P-type ATPase 938939 11053679 Murru_0859 Muricauda ruestringensis DSM 13258 heavy metal translocating P-type ATPase YP_004787328.1 936441 R 886377 CDS YP_004787329.1 344202186 11053680 complement(939011..939562) 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: rbi:RB2501_00801 putative regulatory protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Putative regulatory protein; manually curated; AraC family transcriptional regulator 939562 11053680 Murru_0860 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004787329.1 939011 R 886377 CDS YP_004787330.1 344202187 11053681 complement(939586..939912) 1 NC_015945.1 KEGG: gfo:GFO_1342 copper-translocating P-type ATPase; hypothetical protein 939912 11053681 Murru_0861 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787330.1 939586 R 886377 CDS YP_004787331.1 344202188 11053682 complement(939929..941149) 1 NC_015945.1 PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: cat:CA2559_11753 metal ion efflux outer membrane protein family protein, putative; PFAM: Outer membrane efflux protein; SPTR: Putative uncharacterized protein; outer membrane efflux protein 941149 11053682 Murru_0862 Muricauda ruestringensis DSM 13258 outer membrane efflux protein YP_004787331.1 939929 R 886377 CDS YP_004787332.1 344202189 11053683 complement(941146..944883) 1 NC_015945.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 Putative silver efflux pump; InterPro IPR001036; KEGG: rbi:RB2501_04740 putative copper/silver resistance-related transport membrane protein; PFAM: Acriflavin resistance protein; SPTR: Putative copper/silver resistance-related transport membrane protein; acriflavin resistance protein 944883 11053683 Murru_0863 Muricauda ruestringensis DSM 13258 acriflavin resistance protein YP_004787332.1 941146 R 886377 CDS YP_004787333.1 344202190 11053684 complement(944976..945332) 1 NC_015945.1 KEGG: zpr:ZPR_4261 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 945332 11053684 Murru_0864 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787333.1 944976 R 886377 CDS YP_004787334.1 344202191 11053685 945500..945952 1 NC_015945.1 PFAM: GAF domain; COGs: COG1956 GAF domain-containing protein; InterPro IPR003018; KEGG: fbc:FB2170_08564 hypothetical protein; PFAM: GAF; SPTR: Putative uncharacterized protein; putative GAF sensor protein 945952 11053685 Murru_0865 Muricauda ruestringensis DSM 13258 putative GAF sensor protein YP_004787334.1 945500 D 886377 CDS YP_004787335.1 344202192 11053686 946046..947575 1 NC_015945.1 PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); InterPro IPR011607:IPR013982:IPR002695; KEGG: fbc:FB2170_08559 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain; PRIAM: Phosphoribosylaminoimidazolecarboxamide formyltransferase; SMART: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain; SPTR: Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: AICARFT/IMPCHase bienzyme; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 947575 11053686 Murru_0866 Muricauda ruestringensis DSM 13258 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_004787335.1 946046 D 886377 CDS YP_004787336.1 344202193 11053687 947631..948659 1 NC_015945.1 PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: fbc:FB2170_08554 cell shape-determining protein MreB; PFAM: Cell shape determining protein MreB/Mrl; SPTR: Cell shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; MreB/Mrl family cell shape determining protein 948659 11053687 Murru_0867 Muricauda ruestringensis DSM 13258 MreB/Mrl family cell shape determining protein YP_004787336.1 947631 D 886377 CDS YP_004787337.1 344202194 11053688 948725..949537 1 NC_015945.1 PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; COGs: COG1792 Cell shape-determining protein; InterPro IPR007221; KEGG: fbc:FB2170_08549 putative rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; SPTR: Putative rod shape-determining protein MreC; Rod shape-determining protein MreC 949537 11053688 Murru_0868 Muricauda ruestringensis DSM 13258 Rod shape-determining protein MreC YP_004787337.1 948725 D 886377 CDS YP_004787338.1 344202195 11053689 949534..950040 1 NC_015945.1 KEGG: fbc:FB2170_08544 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 950040 11053689 Murru_0869 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787338.1 949534 D 886377 CDS YP_004787339.1 344202196 11053690 950095..951963 1 NC_015945.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311:IPR001460; KEGG: rbi:RB2501_08925 putative penicillin-binding protein 2; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Putative penicillin-binding protein 2; peptidoglycan glycosyltransferase 951963 11053690 Murru_0870 Muricauda ruestringensis DSM 13258 peptidoglycan glycosyltransferase YP_004787339.1 950095 D 886377 CDS YP_004787340.1 344202197 11053691 951953..953236 1 NC_015945.1 PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: fbc:FB2170_08534 rod shape-determining protein RodA; PFAM: Cell cycle protein; SPTR: Rod shape-determining protein RodA; cell cycle protein 953236 11053691 Murru_0871 Muricauda ruestringensis DSM 13258 cell cycle protein YP_004787340.1 951953 D 886377 CDS YP_004787341.1 344202198 11053692 complement(953233..954030) 1 NC_015945.1 PFAM: DNA/RNA non-specific endonuclease; COGs: COG1864 DNA/RNA endonuclease G NUC1; InterPro IPR001604:IPR020821; KEGG: fbc:FB2170_08529 endonuclease; PFAM: DNA/RNA non-specific endonuclease; SMART: Extracellular Endonuclease, subunit A; DNA/RNA non-specific endonuclease; SPTR: Endonuclease; DNA/RNA non-specific endonuclease 954030 11053692 Murru_0872 Muricauda ruestringensis DSM 13258 DNA/RNA non-specific endonuclease YP_004787341.1 953233 R 886377 CDS YP_004787342.1 344202199 11053693 complement(954113..956284) 1 NC_015945.1 PFAM: C-terminal domain of tail specific protease (DUF3340); Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); COGs: COG0793 Periplasmic protease; InterPro IPR001478:IPR005151:IPR004447; KEGG: fbc:FB2170_08494 putative periplasmic tail-specific proteinase; PFAM: Peptidase S41; PDZ/DHR/GLGF; PRIAM: C-terminal processing peptidase; SMART: Peptidase S41; PDZ/DHR/GLGF; SPTR: Probable periplasmic tail-specific proteinase; TIGRFAM: Peptidase S41A, C-terminal peptidase; carboxyl-terminal protease 956284 11053693 Murru_0873 Muricauda ruestringensis DSM 13258 carboxyl-terminal protease YP_004787342.1 954113 R 886377 CDS YP_004787343.1 344202200 11053694 956486..957265 1 NC_015945.1 PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; COGs: COG0496 acid phosphatase; HAMAP: Survival protein SurE-like phosphatase/nucleotidase; InterPro IPR002828; KEGG: fbc:FB2170_08489 acid phosphatase; PFAM: Survival protein SurE-like phosphatase/nucleotidase; SPTR: 5'-nucleotidase surE; TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; bifunctional 5'-3'-nucleotidase/exopolyphosphatase SurE 957265 11053694 Murru_0874 Muricauda ruestringensis DSM 13258 bifunctional 5'-3'-nucleotidase/exopolyphosphatase SurE YP_004787343.1 956486 D 886377 CDS YP_004787344.1 344202201 11053695 957255..957542 1 NC_015945.1 KEGG: fbc:FB2170_08484 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 957542 11053695 Murru_0875 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787344.1 957255 D 886377 CDS YP_004787345.1 344202202 11053696 957639..958751 1 NC_015945.1 PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; COGs: COG0763 Lipid A disaccharide synthetase; InterPro IPR003835; KEGG: fbc:FB2170_08479 lipid-A-disaccharide synthase; PFAM: Glycosyl transferase, family 19; PRIAM: Lipid-A-disaccharide synthase; SPTR: Lipid-A-disaccharide synthase; TIGRFAM: Glycosyl transferase, family 19; lipid-A-disaccharide synthase 958751 11053696 Murru_0876 Muricauda ruestringensis DSM 13258 lipid-A-disaccharide synthase YP_004787345.1 957639 D 886377 CDS YP_004787346.1 344202203 11053697 958785..959342 1 NC_015945.1 PFAM: NlpC/P60 family; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: fbc:FB2170_08474 hypothetical protein; PFAM: NLP/P60; SPTR: Putative uncharacterized protein; NLP/P60 protein 959342 11053697 Murru_0877 Muricauda ruestringensis DSM 13258 NLP/P60 protein YP_004787346.1 958785 D 886377 CDS YP_004787347.1 344202204 11053698 959362..961368 1 NC_015945.1 PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein; COGs: COG0658 membrane metal-binding protein; InterPro IPR004477; KEGG: fbc:FB2170_08469 competence protein; PFAM: ComEC/Rec2-related protein; SPTR: Competence protein; TIGRFAM: ComEC/Rec2-related protein; ComEC/Rec2-like protein 961368 11053698 Murru_0878 Muricauda ruestringensis DSM 13258 ComEC/Rec2-like protein YP_004787347.1 959362 D 886377 CDS YP_004787348.1 344202205 11053699 complement(961365..962927) 1 NC_015945.1 PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial; COGs: COG3104 Dipeptide/tripeptide permease; InterPro IPR000109:IPR005279; KEGG: fbc:FB2170_08464 dipeptide/tripeptide permease; PFAM: Oligopeptide transporter; SPTR: Di-/tripeptide transporter; TIGRFAM: Amino acid/peptide transporter; amino acid/peptide transporter 962927 11053699 Murru_0879 Muricauda ruestringensis DSM 13258 amino acid/peptide transporter YP_004787348.1 961365 R 886377 CDS YP_004787349.1 344202206 11053700 complement(962943..965102) 1 NC_015945.1 PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469:IPR001375; KEGG: fbc:FB2170_08459 dipeptidyl aminopeptidase IV; PFAM: Peptidase S9B, dipeptidylpeptidase IV N-terminal; Peptidase S9, prolyl oligopeptidase, catalytic domain; PRIAM: Dipeptidyl-peptidase IV; SPTR: Dipeptidyl aminopeptidase IV; dipeptidyl-peptidase IV 965102 11053700 Murru_0880 Muricauda ruestringensis DSM 13258 dipeptidyl-peptidase IV YP_004787349.1 962943 R 886377 CDS YP_004787350.1 344202207 11053701 965279..966595 1 NC_015945.1 PFAM: Hydroxymethylglutaryl-coenzyme A reductase; TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative; COGs: COG1257 Hydroxymethylglutaryl-CoA reductase; InterPro IPR004553; KEGG: fbc:FB2170_08454 hydroxymethylglutaryl CoA reductase; PRIAM: Hydroxymethylglutaryl-CoA reductase; SPTR: Hydroxymethylglutaryl CoA reductase; TIGRFAM: Hydroxymethylglutaryl-CoA reductase, bacterial type; hydroxymethylglutaryl-CoA reductase, degradative 966595 11053701 Murru_0881 Muricauda ruestringensis DSM 13258 hydroxymethylglutaryl-CoA reductase, degradative YP_004787350.1 965279 D 886377 CDS YP_004787351.1 344202208 11053702 966598..967506 1 NC_015945.1 KEGG: fbc:FB2170_08449 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 967506 11053702 Murru_0882 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787351.1 966598 D 886377 CDS YP_004787352.1 344202209 11053703 967518..968246 1 NC_015945.1 PFAM: Metallo-beta-lactamase superfamily; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: fbc:FB2170_01851 beta-lactamase II; PFAM: Beta-lactamase-like; PRIAM: Beta-lactamase; SMART: Beta-lactamase-like; SPTR: Beta-lactamase II; beta-lactamase 968246 11053703 Murru_0883 Muricauda ruestringensis DSM 13258 beta-lactamase YP_004787352.1 967518 D 886377 CDS YP_004787353.1 344202210 11053704 968397..969089 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: fbc:FB2170_01247 DNA binding protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Putative uncharacterized protein; AraC family transcriptional regulator 969089 11053704 Murru_0884 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004787353.1 968397 D 886377 CDS YP_004787354.1 344202211 11053705 969094..969207 1 NC_015945.1 hypothetical protein 969207 11053705 Murru_0885 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787354.1 969094 D 886377 CDS YP_004787355.1 344202212 11053706 969530..972703 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: sli:Slin_6039 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug 972703 11053706 Murru_0886 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004787355.1 969530 D 886377 CDS YP_004787356.1 344202213 11053707 972716..974143 1 NC_015945.1 KEGG: cpi:Cpin_1461 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 974143 11053707 Murru_0887 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787356.1 972716 D 886377 CDS YP_004787357.1 344202214 11053708 974170..975012 1 NC_015945.1 hypothetical protein 975012 11053708 Murru_0888 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787357.1 974170 D 886377 CDS YP_004787358.1 344202215 11053709 975212..975772 1 NC_015945.1 hypothetical protein 975772 11053709 Murru_0889 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787358.1 975212 D 886377 CDS YP_004787359.1 344202216 11053710 complement(975836..977956) 1 NC_015945.1 PFAM: PPIC-type PPIASE domain; InterPro IPR000297; KEGG: fbc:FB2170_08444 peptidylprolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: Peptidylprolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 977956 11053710 Murru_0890 Muricauda ruestringensis DSM 13258 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004787359.1 975836 R 886377 CDS YP_004787360.1 344202217 11053711 complement(978041..979330) 1 NC_015945.1 PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550:IPR000644:IPR005170; KEGG: fbc:FB2170_08439 putative transmembrane CBS domain transporter; PFAM: Cystathionine beta-synthase, core; Domain of unknown function DUF21; Transporter-associated domain; SPTR: Putative transmembrane CBS domain transporter; hypothetical protein 979330 11053711 Murru_0891 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787360.1 978041 R 886377 CDS YP_004787361.1 344202218 11053712 complement(979333..979536) 1 NC_015945.1 KEGG: fbc:FB2170_08434 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 979536 11053712 Murru_0892 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787361.1 979333 R 886377 CDS YP_004787362.1 344202219 11053713 complement(979538..980137) 1 NC_015945.1 PFAM: Protein of unknown function (DUF1239); InterPro IPR010664; KEGG: fbc:FB2170_08429 hypothetical protein; PFAM: Lipopolysccharide assembly, LptC-related; SPTR: Putative uncharacterized protein; hypothetical protein 980137 11053713 Murru_0893 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787362.1 979538 R 886377 CDS YP_004787363.1 344202220 11053714 complement(980137..981507) 1 NC_015945.1 KEGG: rbi:RB2501_08830 TPR domain-containing protein; SPTR: TPR domain protein; hypothetical protein 981507 11053714 Murru_0894 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787363.1 980137 R 886377 CDS YP_004787364.1 344202221 11053715 complement(981611..982876) 1 NC_015945.1 KEGG: fbc:FB2170_08419 putative outer membrane protein; SPTR: Putative outer membrane protein; putative outer membrane protein 982876 11053715 Murru_0895 Muricauda ruestringensis DSM 13258 putative outer membrane protein YP_004787364.1 981611 R 886377 CDS YP_004787365.1 344202222 11053716 complement(982877..983605) 1 NC_015945.1 PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III; COGs: COG1521 Putative transcriptional regulator protein; HAMAP: Type III pantothenate kinase; InterPro IPR004619; KEGG: fbc:FB2170_08414 putative regulatory protein; PFAM: Type III pantothenate kinase; SPTR: Type III pantothenate kinase; TIGRFAM: Type III pantothenate kinase; putative Baf family transcriptional acitvator 983605 11053716 Murru_0896 Muricauda ruestringensis DSM 13258 putative Baf family transcriptional acitvator YP_004787365.1 982877 R 886377 CDS YP_004787366.1 344202223 11053718 984292..984873 1 NC_015945.1 KEGG: bvu:BVU_3655 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 984873 11053718 Murru_0897 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787366.1 984292 D 886377 CDS YP_004787367.1 344202224 11053719 984863..985309 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 985309 11053719 Murru_0898 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787367.1 984863 D 886377 CDS YP_004787368.1 344202225 11053720 complement(985608..986318) 1 NC_015945.1 PFAM: TIR domain; InterPro IPR000157; KEGG: lby:Lbys_0435 tir protein; PFAM: Toll-Interleukin receptor; SMART: Toll-Interleukin receptor; SPTR: Putative uncharacterized protein; TIR protein 986318 11053720 Murru_0899 Muricauda ruestringensis DSM 13258 TIR protein YP_004787368.1 985608 R 886377 CDS YP_004787369.1 344202226 11053721 complement(986443..986682) 1 NC_015945.1 PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: fjo:Fjoh_4552 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; helix-turn-helix domain-containing protein 986682 11053721 Murru_0900 Muricauda ruestringensis DSM 13258 helix-turn-helix domain-containing protein YP_004787369.1 986443 R 886377 CDS YP_004787370.1 344202227 11053722 986780..987238 1 NC_015945.1 hypothetical protein 987238 11053722 Murru_0901 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787370.1 986780 D 886377 CDS YP_004787371.1 344202228 11053723 complement(987277..988314) 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: rbi:RB2501_05395 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulatory protein; AraC family transcriptional regulator 988314 11053723 Murru_0902 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004787371.1 987277 R 886377 CDS YP_004787372.1 344202229 11053724 988528..989223 1 NC_015945.1 PFAM: Uncharacterised ACR, COG2135; COGs: COG2135 conserved hypothetical protein; InterPro IPR003738; KEGG: rbi:RB2501_08510 hypothetical protein; PFAM: Protein of unknown function DUF159; SPTR: Putative uncharacterized protein; hypothetical protein 989223 11053724 Murru_0903 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787372.1 988528 D 886377 CDS YP_004787373.1 344202230 11053725 989393..989554 1 NC_015945.1 PFAM: Protein of unknown function (DUF1328); HAMAP: Protein of unknown function DUF1328; InterPro IPR009760; KEGG: fjo:Fjoh_4310 hypothetical protein; PFAM: Protein of unknown function DUF1328; SPTR: Putative uncharacterized protein; hypothetical protein 989554 11053725 Murru_0904 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787373.1 989393 D 886377 CDS YP_004787374.1 344202231 11053726 989598..989840 1 NC_015945.1 KEGG: zpr:ZPR_3512 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 989840 11053726 Murru_0905 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787374.1 989598 D 886377 CDS YP_004787375.1 344202232 11053727 989979..991400 1 NC_015945.1 PFAM: Phospholipase D Active site motif; COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: fbc:FB2170_14418 cardiolipin synthetase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; SPTR: Phospholipase D; phospholipase D 991400 11053727 Murru_0906 Muricauda ruestringensis DSM 13258 phospholipase D YP_004787375.1 989979 D 886377 CDS YP_004787376.1 344202233 11053728 991473..991958 1 NC_015945.1 KEGG: gfo:GFO_1631 secreted protein; SPTR: Putative uncharacterized protein; hypothetical protein 991958 11053728 Murru_0907 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787376.1 991473 D 886377 CDS YP_004787377.1 344202234 11053729 992152..992784 1 NC_015945.1 KEGG: cat:CA2559_09178 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 992784 11053729 Murru_0908 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787377.1 992152 D 886377 CDS YP_004787378.1 344202235 11053730 complement(992779..994302) 1 NC_015945.1 PFAM: GH3 auxin-responsive promoter; InterPro IPR004993; KEGG: cat:CA2559_12318 hypothetical protein; PFAM: GH3 auxin-responsive promoter; SPTR: Putative uncharacterized protein; GH3 auxin-responsive promoter 994302 11053730 Murru_0909 Muricauda ruestringensis DSM 13258 GH3 auxin-responsive promoter YP_004787378.1 992779 R 886377 CDS YP_004787379.1 344202236 11053731 complement(994386..994682) 1 NC_015945.1 hypothetical protein 994682 11053731 Murru_0910 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787379.1 994386 R 886377 CDS YP_004787380.1 344202237 11053732 994990..995217 1 NC_015945.1 KEGG: rbi:RB2501_14879 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 995217 11053732 Murru_0911 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787380.1 994990 D 886377 CDS YP_004787381.1 344202238 11053733 995515..995616 1 NC_015945.1 hypothetical protein 995616 11053733 Murru_0912 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787381.1 995515 D 886377 CDS YP_004787382.1 344202239 11053734 complement(995725..997272) 1 NC_015945.1 PFAM: Glycosyl hydrolases family 32 C terminal; Glycosyl hydrolases family 32 N-terminal domain; COGs: COG1621 Beta-fructosidase (levanase/invertase); InterPro IPR013148:IPR013189:IPR001362; KEGG: gfo:GFO_0009 glycosy hydrolase family protein; PFAM: Glycosyl hydrolases family 32, N-terminal; Glycosyl hydrolase family 32, C-terminal; PRIAM: Fructan beta-fructosidase; SMART: Glycoside hydrolase, family 32; SPTR: Levanase; fructan beta-fructosidase 997272 11053734 Murru_0913 Muricauda ruestringensis DSM 13258 fructan beta-fructosidase YP_004787382.1 995725 R 886377 CDS YP_004787383.1 344202240 11053735 997477..998085 1 NC_015945.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2064); COGs: COG3222 conserved hypothetical protein; InterPro IPR018641; KEGG: cat:CA2559_05025 hypothetical protein; PFAM: Protein of unknown function DUF2064; SPTR: Putative uncharacterized protein; hypothetical protein 998085 11053735 Murru_0914 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787383.1 997477 D 886377 CDS YP_004787384.1 344202241 11053736 998090..998905 1 NC_015945.1 PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family; COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR000845:IPR011268:IPR011270; KEGG: fbc:FB2170_08394 purine nucleoside phosphorylase; PFAM: Nucleoside phosphorylase domain; PRIAM: Purine-nucleoside phosphorylase; SPTR: Purine nucleoside phosphorylase; TIGRFAM: Purine nucleoside phosphorylase I, inosine/guanosine-specific; Inosine guanosine/xanthosine phosphorylase; purine nucleoside phosphorylase I 998905 11053736 Murru_0915 Muricauda ruestringensis DSM 13258 purine nucleoside phosphorylase I YP_004787384.1 998090 D 886377 CDS YP_004787385.1 344202242 11053737 998902..999867 1 NC_015945.1 PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: fbc:FB2170_08389 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; type 11 methyltransferase 999867 11053737 Murru_0916 Muricauda ruestringensis DSM 13258 type 11 methyltransferase YP_004787385.1 998902 D 886377 CDS YP_004787386.1 344202243 11053738 complement(999873..1000922) 1 NC_015945.1 PFAM: N-acetylmuramoyl-L-alanine amidase; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: rbi:RB2501_08745 putative cell wall biosynthesis related protein; PFAM: Cell wall hydrolase/autolysin, catalytic; SPTR: Putative cell wall biosynthesis related protein; cell wall hydrolase/autolysin 1000922 11053738 Murru_0917 Muricauda ruestringensis DSM 13258 cell wall hydrolase/autolysin YP_004787386.1 999873 R 886377 CDS YP_004787387.1 344202244 11053739 complement(1000897..1001826) 1 NC_015945.1 PFAM: N-acetylmuramoyl-L-alanine amidase; KEGG: fbc:FB2170_08364 putative cell wall biosynthesis related protein; SPTR: Putative cell wall biosynthesis related protein; putative cell wall biosynthesis-like protein 1001826 11053739 Murru_0918 Muricauda ruestringensis DSM 13258 putative cell wall biosynthesis-like protein YP_004787387.1 1000897 R 886377 CDS YP_004787388.1 344202245 11053740 complement(1001922..1002941) 1 NC_015945.1 KEGG: fbc:FB2170_08349 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1002941 11053740 Murru_0919 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787388.1 1001922 R 886377 CDS YP_004787389.1 344202246 11053741 1003071..1004420 1 NC_015945.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027; KEGG: fbc:FB2170_08334 NADH oxidase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Rubredoxin--NAD(+) reductase; SPTR: NADH oxidase; rubredoxin--NAD(+) reductase 1004420 11053741 Murru_0920 Muricauda ruestringensis DSM 13258 rubredoxin--NAD(+) reductase YP_004787389.1 1003071 D 886377 CDS YP_004787390.1 344202247 11053742 1004474..1006084 1 NC_015945.1 InterPro IPR001450; KEGG: rbi:RB2501_08730 pyridine nucleotide-disulphide oxidoreductase domain-containing protein; PFAM: 4Fe-4S binding domain; SPTR: Pyridine nucleotide-disulphide oxidoreductase domain protein; 4Fe-4S ferredoxin 1006084 11053742 Murru_0921 Muricauda ruestringensis DSM 13258 4Fe-4S ferredoxin YP_004787390.1 1004474 D 886377 CDS YP_004787391.1 344202248 11053743 1006377..1007066 1 NC_015945.1 PFAM: Glycosyl transferase family 2; InterPro IPR001173; KEGG: fbc:FB2170_08319 group 2 family glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 2 family protein; family 2 glycosyl transferase 1007066 11053743 Murru_0922 Muricauda ruestringensis DSM 13258 family 2 glycosyl transferase YP_004787391.1 1006377 D 886377 CDS YP_004787392.1 344202249 11053744 1007066..1008550 1 NC_015945.1 PFAM: Glycosyl transferase family 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: rbi:RB2501_08720 glycosyltransferase; PFAM: Glycosyl transferase, family 2; PRIAM: Glucomannan 4-beta-mannosyltransferase; SPTR: Glycosyltransferase; glucomannan 4-beta-mannosyltransferase 1008550 11053744 Murru_0923 Muricauda ruestringensis DSM 13258 glucomannan 4-beta-mannosyltransferase YP_004787392.1 1007066 D 886377 CDS YP_004787393.1 344202250 11053745 1008560..1009912 1 NC_015945.1 PFAM: Protein of unknown function (DUF2029); KEGG: fbc:FB2170_08309 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1009912 11053745 Murru_0924 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787393.1 1008560 D 886377 CDS YP_004787394.1 344202251 11053746 1010133..1010747 1 NC_015945.1 PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: rbi:RB2501_08710 hypothetical protein; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Putative uncharacterized protein; N-acetyltransferase GCN5 1010747 11053746 Murru_0925 Muricauda ruestringensis DSM 13258 N-acetyltransferase GCN5 YP_004787394.1 1010133 D 886377 CDS YP_004787395.1 344202252 11053747 1010891..1012078 1 NC_015945.1 PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; COGs: COG0137 Argininosuccinate synthase; InterPro IPR001518; KEGG: fbc:FB2170_08294 argininosuccinate synthase; PFAM: Argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: Argininosuccinate synthase; argininosuccinate synthase 1012078 11053747 Murru_0926 Muricauda ruestringensis DSM 13258 argininosuccinate synthase YP_004787395.1 1010891 D 886377 CDS YP_004787396.1 344202253 11053748 1012167..1013153 1 NC_015945.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form; COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase, type 1; InterPro IPR000534:IPR012280:IPR000706; KEGG: fbc:FB2170_08289 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation domain; PRIAM: N-acetyl-gamma-glutamyl-phosphate reductase; SMART: Semialdehyde dehydrogenase, NAD-binding; SPTR: N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, type 1; N-acetyl-gamma-glutamyl-phosphate reductase 1013153 11053748 Murru_0927 Muricauda ruestringensis DSM 13258 N-acetyl-gamma-glutamyl-phosphate reductase YP_004787396.1 1012167 D 886377 CDS YP_004787397.1 344202254 11053749 1013350..1014144 1 NC_015945.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR004455:IPR000304; KEGG: fbc:FB2170_08284 putative pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; PRIAM: Pyrroline-5-carboxylate reductase; SPTR: Putative pyrroline-5-carboxylate reductase; TIGRFAM: Pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 1014144 11053749 Murru_0928 Muricauda ruestringensis DSM 13258 pyrroline-5-carboxylate reductase YP_004787397.1 1013350 D 886377 CDS YP_004787398.1 344202255 11053750 1014194..1015321 1 NC_015945.1 PFAM: Aminotransferase class-III; COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR005814; KEGG: fbc:FB2170_08279 acetylornithine aminotransferase; PFAM: Aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: Acetylornithine aminotransferase; acetylornithine transaminase 1015321 11053750 Murru_0929 Muricauda ruestringensis DSM 13258 acetylornithine transaminase YP_004787398.1 1014194 D 886377 CDS YP_004787399.1 344202256 11053751 1015318..1016256 1 NC_015945.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; COGs: COG0078 Ornithine carbamoyltransferase; InterPro IPR006132:IPR006131; KEGG: fbc:FB2170_08264 putative ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; PRIAM: N-acetylornithine carbamoyltransferase; SPTR: Putative ornithine carbamoyltransferase; N-acetylornithine carbamoyltransferase 1016256 11053751 Murru_0930 Muricauda ruestringensis DSM 13258 N-acetylornithine carbamoyltransferase YP_004787399.1 1015318 D 886377 CDS YP_004787400.1 344202257 11053752 1016253..1016999 1 NC_015945.1 PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: fbc:FB2170_08259 oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Oxidoreductase; 3-oxoacyl-ACP reductase 1016999 11053752 Murru_0931 Muricauda ruestringensis DSM 13258 3-oxoacyl-ACP reductase YP_004787400.1 1016253 D 886377 CDS YP_004787401.1 344202258 11053753 1017001..1017780 1 NC_015945.1 PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase; COGs: COG0548 Acetylglutamate kinase; InterPro IPR001048:IPR004662; KEGG: fbc:FB2170_08254 putative acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; PRIAM: Acetylglutamate kinase; SPTR: Acetylglutamate kinase; TIGRFAM: Acetylglutamate kinase; acetylglutamate kinase 1017780 11053753 Murru_0932 Muricauda ruestringensis DSM 13258 acetylglutamate kinase YP_004787401.1 1017001 D 886377 CDS YP_004787402.1 344202259 11053754 1017777..1018847 1 NC_015945.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650; KEGG: fbc:FB2170_08249 acetylornithine deacetylase; PFAM: Peptidase M20; Peptidase M20, dimerisation; PRIAM: Succinyl-diaminopimelate desuccinylase; SPTR: Acetylornithine deacetylase; succinyl-diaminopimelate desuccinylase 1018847 11053754 Murru_0933 Muricauda ruestringensis DSM 13258 succinyl-diaminopimelate desuccinylase YP_004787402.1 1017777 D 886377 CDS YP_004787403.1 344202260 11053755 1018937..1020223 1 NC_015945.1 PFAM: Lyase; TIGRFAM: argininosuccinate lyase; COGs: COG0165 Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; InterPro IPR022761:IPR009049; KEGG: fbc:FB2170_08244 argininosuccinate lyase; PFAM: Lyase 1, N-terminal; PRIAM: Argininosuccinate lyase; SPTR: Argininosuccinate lyase; TIGRFAM: Argininosuccinate lyase; argininosuccinate lyase 1020223 11053755 Murru_0934 Muricauda ruestringensis DSM 13258 argininosuccinate lyase YP_004787403.1 1018937 D 886377 CDS YP_004787404.1 344202261 11053756 1020373..1021125 1 NC_015945.1 hypothetical protein 1021125 11053756 Murru_0935 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787404.1 1020373 D 886377 CDS YP_004787405.1 344202262 11053757 1021404..1022243 1 NC_015945.1 KEGG: sth:STH1871 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1022243 11053757 Murru_0936 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787405.1 1021404 D 886377 CDS YP_004787406.1 344202263 11053758 1022535..1024724 1 NC_015945.1 PFAM: Domain of unknown function (DUF1083); KEGG: fbc:FB2170_11461 putative membrane associated hydrolase; SPTR: Putative membrane associated hydrolase; putative membrane associated hydrolase 1024724 11053758 Murru_0937 Muricauda ruestringensis DSM 13258 putative membrane associated hydrolase YP_004787406.1 1022535 D 886377 CDS YP_004787407.1 344202264 11053759 1024874..1025128 1 NC_015945.1 PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein; InterPro IPR006442; KEGG: ran:Riean_1832 prevent-host-death family protein; PFAM: Prevent-host-death protein; SPTR: Putative uncharacterized protein; TIGRFAM: Prevent-host-death protein; prevent-host-death family protein 1025128 11053759 Murru_0938 Muricauda ruestringensis DSM 13258 prevent-host-death family protein YP_004787407.1 1024874 D 886377 CDS YP_004787408.1 344202265 11053760 1025131..1025388 1 NC_015945.1 PFAM: Plasmid encoded toxin Txe; TIGRFAM: toxin-antitoxin system, toxin component, Txe/YoeB family; COGs: COG4115 conserved hypothetical protein; InterPro IPR009614; KEGG: ran:Riean_1833 addiction module toxin, txe/yoeb family; PFAM: Addiction module toxin, Txe/YoeB; SPTR: Toxin YoeB; TIGRFAM: Addiction module toxin, Txe/YoeB; Txe/YoeB family addiction module toxin 1025388 11053760 Murru_0939 Muricauda ruestringensis DSM 13258 Txe/YoeB family addiction module toxin YP_004787408.1 1025131 D 886377 CDS YP_004787409.1 344202266 11053761 complement(1025473..1026330) 1 NC_015945.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR002942:IPR006145:IPR000748; KEGG: rbi:RB2501_08660 ribosomal large subunit pseudouridine synthase B; PFAM: RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; SMART: RNA-binding S4; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; pseudouridine synthase Rsu 1026330 11053761 Murru_0940 Muricauda ruestringensis DSM 13258 pseudouridine synthase Rsu YP_004787409.1 1025473 R 886377 CDS YP_004787410.1 344202267 11053762 complement(1026373..1027278) 1 NC_015945.1 PFAM: UbiA prenyltransferase family; COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537; KEGG: rbi:RB2501_08655 hypothetical protein; PFAM: UbiA prenyltransferase; SPTR: Putative uncharacterized protein; UbiA prenyltransferase 1027278 11053762 Murru_0941 Muricauda ruestringensis DSM 13258 UbiA prenyltransferase YP_004787410.1 1026373 R 886377 CDS YP_004787411.1 344202268 11053763 complement(1027289..1028227) 1 NC_015945.1 PFAM: GHMP kinases N terminal domain; COGs: COG1577 Mevalonate kinase; InterPro IPR006204; KEGG: fbc:FB2170_08219 hypothetical protein; PFAM: GHMP kinase; SPTR: Putative uncharacterized protein; GHMP kinase 1028227 11053763 Murru_0942 Muricauda ruestringensis DSM 13258 GHMP kinase YP_004787411.1 1027289 R 886377 CDS YP_004787412.1 344202269 11053764 complement(1028368..1029453) 1 NC_015945.1 PFAM: GHMP kinases N terminal domain; TIGRFAM: diphosphomevalonate decarboxylase; COGs: COG3407 Mevalonate pyrophosphate decarboxylase; InterPro IPR006204:IPR005935; KEGG: fbc:FB2170_08214 diphosphomevalonate decarboxylase; PFAM: GHMP kinase; SPTR: Diphosphomevalonate decarboxylase; TIGRFAM: Diphosphomevalonate decarboxylase; diphosphomevalonate decarboxylase 1029453 11053764 Murru_0943 Muricauda ruestringensis DSM 13258 diphosphomevalonate decarboxylase YP_004787412.1 1028368 R 886377 CDS YP_004787413.1 344202270 11053765 1029548..1030024 1 NC_015945.1 PFAM: TspO/MBR family; COGs: COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog); InterPro IPR004307; KEGG: cat:CA2559_04610 integral membrane protein; PFAM: TspO/MBR-related protein; SPTR: Integral membrane protein; TspO and MBR-like protein 1030024 11053765 Murru_0944 Muricauda ruestringensis DSM 13258 TspO and MBR-like protein YP_004787413.1 1029548 D 886377 CDS YP_004787414.1 344202271 11053766 complement(1030026..1030574) 1 NC_015945.1 PFAM: Protein of unknown function (DUF1697); COGs: COG3797 conserved hypothetical protein; InterPro IPR012545; KEGG: fbc:FB2170_08199 hypothetical protein; PFAM: Protein of unknown function DUF1697; SPTR: Putative uncharacterized protein; hypothetical protein 1030574 11053766 Murru_0945 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787414.1 1030026 R 886377 CDS YP_004787415.1 344202272 11053767 1030620..1032116 1 NC_015945.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase; COGs: COG0554 Glycerol kinase; HAMAP: Glycerol kinase; InterPro IPR018484:IPR018485:IPR005999; KEGG: zpr:ZPR_0767 glycerol kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; PRIAM: Glycerol kinase; SPTR: Glycerol kinase; TIGRFAM: Glycerol kinase; glycerol kinase 1032116 11053767 Murru_0946 Muricauda ruestringensis DSM 13258 glycerol kinase YP_004787415.1 1030620 D 886377 CDS YP_004787416.1 344202273 11053768 1032151..1032879 1 NC_015945.1 PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins; COGs: COG0580 Glycerol uptake facilitator and related permease (Major Intrinsic Protein Family); InterPro IPR000425; KEGG: zpr:ZPR_0768 putative glycerol diffusion channel; PFAM: Major intrinsic protein; SPTR: Putative glycerol diffusion channel; major intrinsic protein 1032879 11053768 Murru_0947 Muricauda ruestringensis DSM 13258 major intrinsic protein YP_004787416.1 1032151 D 886377 CDS YP_004787417.1 344202274 11053769 complement(1032885..1034150) 1 NC_015945.1 PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; COGs: COG2081 flavoprotein; InterPro IPR004792; KEGG: fbc:FB2170_08194 hypothetical protein; PFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like; SPTR: HI0933-like protein; TIGRFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like; hypothetical protein 1034150 11053769 Murru_0948 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787417.1 1032885 R 886377 CDS YP_004787418.1 344202275 11053770 complement(1034150..1034845) 1 NC_015945.1 PFAM: Glycerophosphoryl diester phosphodiesterase family; COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: fbc:FB2170_08189 glcerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; SPTR: Glcerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase 1034845 11053770 Murru_0949 Muricauda ruestringensis DSM 13258 glycerophosphoryl diester phosphodiesterase YP_004787418.1 1034150 R 886377 CDS YP_004787419.1 344202276 11053771 complement(1034950..1036821) 1 NC_015945.1 PFAM: Alpha amylase, catalytic domain; COGs: COG0366 Glycosidase; InterPro IPR006047:IPR006589; KEGG: fbc:FB2170_08184 putative glycosidase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Putative glycosidase; alpha amylase 1036821 11053771 Murru_0950 Muricauda ruestringensis DSM 13258 alpha amylase YP_004787419.1 1034950 R 886377 CDS YP_004787420.1 344202277 11053772 complement(1036853..1037872) 1 NC_015945.1 PFAM: Bacterial regulatory proteins, lacI family; family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: fbc:FB2170_08169 putative LacI family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; LacI family transcriptional regulator 1037872 11053772 Murru_0951 Muricauda ruestringensis DSM 13258 LacI family transcriptional regulator YP_004787420.1 1036853 R 886377 CDS YP_004787421.1 344202278 11053773 1038230..1041313 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: rbi:RB2501_08585 outer membrane protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Outer membrane protein; TonB-dependent receptor 1041313 11053773 Murru_0952 Muricauda ruestringensis DSM 13258 TonB-dependent receptor YP_004787421.1 1038230 D 886377 CDS YP_004787422.1 344202279 11053774 1041324..1042955 1 NC_015945.1 PFAM: SusD family; InterPro IPR012944; KEGG: rbi:RB2501_08580 hypothetical protein; PFAM: RagB/SusD; SPTR: Putative outer membrane protein, probably involved in nutrient binding; RagB/SusD domain-containing protein 1042955 11053774 Murru_0953 Muricauda ruestringensis DSM 13258 RagB/SusD domain-containing protein YP_004787422.1 1041324 D 886377 CDS YP_004787423.1 344202280 11053775 1043122..1046424 1 NC_015945.1 PFAM: ASPIC and UnbV; FG-GAP repeat; InterPro IPR013517; KEGG: rbi:RB2501_08575 hypothetical protein; PFAM: FG-GAP; SPTR: Putative uncharacterized protein; FG-GAP repeat-containing protein 1046424 11053775 Murru_0954 Muricauda ruestringensis DSM 13258 FG-GAP repeat-containing protein YP_004787423.1 1043122 D 886377 CDS YP_004787424.1 344202281 11053776 1046421..1049768 1 NC_015945.1 PFAM: ASPIC and UnbV; InterPro IPR011519:IPR013517; KEGG: rbi:RB2501_08570 hypothetical protein; PFAM: ASPIC/UnbV; FG-GAP; SPTR: Putative uncharacterized protein; ASPIC/UnbV domain-containing protein 1049768 11053776 Murru_0955 Muricauda ruestringensis DSM 13258 ASPIC/UnbV domain-containing protein YP_004787424.1 1046421 D 886377 CDS YP_004787425.1 344202282 11053777 1049761..1053000 1 NC_015945.1 PFAM: ASPIC and UnbV; FG-GAP repeat; InterPro IPR013517; KEGG: rbi:RB2501_08565 hypothetical protein; PFAM: FG-GAP; SPTR: ASPIC-like protein; FG-GAP repeat-containing protein 1053000 11053777 Murru_0956 Muricauda ruestringensis DSM 13258 FG-GAP repeat-containing protein YP_004787425.1 1049761 D 886377 CDS YP_004787426.1 344202283 11053778 1052993..1054342 1 NC_015945.1 PFAM: PAP2 superfamily; KEGG: rbi:RB2501_08560 phosphoesterase, PA-phosphatase related protein; SPTR: Phosphoesterase, PA-phosphatase related protein; phosphoesterase, PA-phosphatase-like protein 1054342 11053778 Murru_0957 Muricauda ruestringensis DSM 13258 phosphoesterase, PA-phosphatase-like protein YP_004787426.1 1052993 D 886377 CDS YP_004787427.1 344202284 11053779 1054365..1055264 1 NC_015945.1 PFAM: Bacterial transcription activator, effector binding domain; KEGG: rbi:RB2501_08555 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1055264 11053779 Murru_0958 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787427.1 1054365 D 886377 CDS YP_004787428.1 344202285 11053780 1055257..1056114 1 NC_015945.1 KEGG: fbc:FB2170_08119 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1056114 11053780 Murru_0959 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787428.1 1055257 D 886377 CDS YP_004787429.1 344202286 11053781 complement(1056100..1056249) 1 NC_015945.1 hypothetical protein 1056249 11053781 Murru_0960 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787429.1 1056100 R 886377 CDS YP_004787430.1 344202287 11053782 1056273..1058360 1 NC_015945.1 PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; COGs: COG0514 Superfamily II DNA helicase; InterProIPR011545:IPR001650:IPR018982:IPR002121:IPR 006293:IPR004589:IPR014001; KEGG: cat:CA2559_01900 ATP-dependent DNA helicase RecQ; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; RQC domain; Helicase/RNase D C-terminal, HRDC domain; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; RQC domain; Helicase/RNase D C-terminal, HRDC domain; SPTR: ATP-dependent DNA helicase recQ; TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type; ATP-dependent DNA helicase RecQ 1058360 11053782 Murru_0961 Muricauda ruestringensis DSM 13258 ATP-dependent DNA helicase RecQ YP_004787430.1 1056273 D 886377 CDS YP_004787431.1 344202288 11053783 complement(1058382..1062101) 1 NC_015945.1 PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: fbc:FB2170_08114 hypothetical protein; PFAM: Metallo-dependent phosphatase; SPTR: Putative uncharacterized protein; metallophosphoesterase 1062101 11053783 Murru_0962 Muricauda ruestringensis DSM 13258 metallophosphoesterase YP_004787431.1 1058382 R 886377 CDS YP_004787432.1 344202289 11053784 1062149..1063342 1 NC_015945.1 PFAM: HD domain; InterPro IPR006674:IPR003607; KEGG: fbc:FB2170_08109 hypothetical protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Putative uncharacterized protein; metal-dependent phosphohydrolase HD sub domain-containing protein 1063342 11053784 Murru_0963 Muricauda ruestringensis DSM 13258 metal-dependent phosphohydrolase HD sub domain-containing protein YP_004787432.1 1062149 D 886377 CDS YP_004787433.1 344202290 11053785 complement(1063346..1065721) 1 NC_015945.1 KEGG: fbc:FB2170_08104 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1065721 11053785 Murru_0964 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787433.1 1063346 R 886377 CDS YP_004787434.1 344202291 11053786 1065794..1066735 1 NC_015945.1 PFAM: Calcineurin-like phosphoesterase; KEGG: fbc:FB2170_08099 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1066735 11053786 Murru_0965 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787434.1 1065794 D 886377 CDS YP_004787435.1 344202292 11053787 1066738..1067901 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: rbi:RB2501_08520 DNA binding protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: DNA binding protein; AraC family transcriptional regulator 1067901 11053787 Murru_0966 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004787435.1 1066738 D 886377 CDS YP_004787436.1 344202293 11053788 1067991..1069133 1 NC_015945.1 PFAM: Acyltransferase family; KEGG: rbi:RB2501_08515 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1069133 11053788 Murru_0967 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787436.1 1067991 D 886377 CDS YP_004787437.1 344202294 11053789 1069209..1069871 1 NC_015945.1 KEGG: rbi:RB2501_08455 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1069871 11053789 Murru_0968 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787437.1 1069209 D 886377 CDS YP_004787438.1 344202295 11053790 complement(1069882..1072050) 1 NC_015945.1 PFAM: Penicillin amidase; COGs: COG2366 Protein related to penicillin acylase; InterPro IPR002692; KEGG: fbc:FB2170_07894 penicillin amidase family protein; PFAM: Peptidase S45, penicillin amidase; PRIAM: Glutaryl-7-aminocephalosporanic-acid acylase; SPTR: Penicillin amidase family protein; glutaryl-7-aminocephalosporanic-acid acylase 1072050 11053790 Murru_0969 Muricauda ruestringensis DSM 13258 glutaryl-7-aminocephalosporanic-acid acylase YP_004787438.1 1069882 R 886377 CDS YP_004787439.1 344202296 11053791 complement(1072102..1073142) 1 NC_015945.1 PFAM: Domain of unknown function (DUF477); COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: pmr:PMI2644 hypothetical protein; PFAM: Protein of unknown function DUF477; SPTR: Putative membrane protein; hypothetical protein 1073142 11053791 Murru_0970 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787439.1 1072102 R 886377 CDS YP_004787440.1 344202297 11053792 1073262..1074998 1 NC_015945.1 PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR001140:IPR003439:IPR003593; KEGG: fbc:FB2170_07889 ABC transporter ATP-binding and permease; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding and permease; xenobiotic-transporting ATPase 1074998 11053792 Murru_0971 Muricauda ruestringensis DSM 13258 xenobiotic-transporting ATPase YP_004787440.1 1073262 D 886377 CDS YP_004787441.1 344202298 11053793 1075132..1076751 1 NC_015945.1 PFAM: Pentapeptide repeats (8 copies); InterPro IPR001646; KEGG: cat:CA2559_03095 hypothetical protein; PFAM: Pentapeptide repeat; SPTR: Putative uncharacterized protein; pentapeptide repeat-containing protein 1076751 11053793 Murru_0972 Muricauda ruestringensis DSM 13258 pentapeptide repeat-containing protein YP_004787441.1 1075132 D 886377 CDS YP_004787442.1 344202299 11053794 complement(1076773..1077105) 1 NC_015945.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; InterPro IPR001041; KEGG: rbi:RB2501_08445 ferredoxin; PFAM: Ferredoxin; SPTR: Ferredoxin; ferredoxin 1077105 11053794 Murru_0973 Muricauda ruestringensis DSM 13258 ferredoxin YP_004787442.1 1076773 R 886377 CDS YP_004787443.1 344202300 11053795 complement(1077162..1078220) 1 NC_015945.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG0492 Thioredoxin reductase; HAMAP: Ferredoxin--NADP reductase, type 2; InterPro IPR013027:IPR022890; KEGG: rbi:RB2501_08440 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Ferredoxin--NADP(+) reductase; SPTR: Thioredoxin reductase; ferredoxin--NADP reductase 1078220 11053795 Murru_0974 Muricauda ruestringensis DSM 13258 ferredoxin--NADP reductase YP_004787443.1 1077162 R 886377 CDS YP_004787444.1 344202301 11053796 complement(1078284..1078529) 1 NC_015945.1 PFAM: NifU-like domain; COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: rbi:RB2501_08435 hypothetical protein; PFAM: NIF system FeS cluster assembly, NifU, C-terminal; SPTR: Putative uncharacterized protein; nitrogen-fixing NifU domain-containing protein 1078529 11053796 Murru_0975 Muricauda ruestringensis DSM 13258 nitrogen-fixing NifU domain-containing protein YP_004787444.1 1078284 R 886377 CDS YP_004787445.1 344202302 11053797 complement(1078532..1079671) 1 NC_015945.1 PFAM: ParA/MinD ATPase like; ATPase MipZ; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR019591; KEGG: fbc:FB2170_07879 hypothetical protein; PFAM: ATPase-like, ParA/MinD; SPTR: Putative uncharacterized protein; ParA/MinD-like ATPase 1079671 11053797 Murru_0976 Muricauda ruestringensis DSM 13258 ParA/MinD-like ATPase YP_004787445.1 1078532 R 886377 CDS YP_004787446.1 344202303 11053798 1079898..1081565 1 NC_015945.1 PFAM: Amidase; COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR000120; KEGG: sli:Slin_6324 amidase; PFAM: Amidase; PRIAM: Amidase; SPTR: Glutamyl-tRNA(Gln) amidotransferase subunit A; amidase 1081565 11053798 Murru_0977 Muricauda ruestringensis DSM 13258 amidase YP_004787446.1 1079898 D 886377 CDS YP_004787447.1 344202304 11053799 complement(1081562..1081885) 1 NC_015945.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; COGs: COG3695 methylated DNA-protein cysteine methyltransferase; InterPro IPR014048; KEGG: fbc:FB2170_07819 putative 6-O-methylguanine DNA methyltransferase family protein; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; SPTR: Putative 6-O-methylguanine DNA methyltransferase family protein; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; methylated-DNA--protein-cysteine methyltransferase 1081885 11053799 Murru_0978 Muricauda ruestringensis DSM 13258 methylated-DNA--protein-cysteine methyltransferase YP_004787447.1 1081562 R 886377 CDS YP_004787448.1 344202305 11053800 complement(1081887..1082522) 1 NC_015945.1 PFAM: LysE type translocator; InterPro IPR001123; KEGG: fbc:FB2170_07814 hypothetical protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Putative uncharacterized protein; lysine exporter protein LysE/YggA 1082522 11053800 Murru_0979 Muricauda ruestringensis DSM 13258 lysine exporter protein LysE/YggA YP_004787448.1 1081887 R 886377 CDS YP_004787449.1 344202306 11053801 complement(1082526..1083194) 1 NC_015945.1 PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; COGs: COG0220 S-adenosylmethionine-dependent methyltransferase; HAMAP: tRNA (guanine-N-7) methyltransferase; InterPro IPR003358; KEGG: cat:CA2559_01795 putative methyltransferase; PFAM: tRNA (guanine-N-7) methyltransferase; SPTR: tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N-7) methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 1083194 11053801 Murru_0980 Muricauda ruestringensis DSM 13258 tRNA (guanine-N(7)-)-methyltransferase YP_004787449.1 1082526 R 886377 CDS YP_004787450.1 344202307 11053802 1083281..1084393 1 NC_015945.1 PFAM: Glycosyltransferase family 28 C-terminal domain; TIGRFAM: conserved hypothetical protein; KEGG: fjo:Fjoh_0541 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1084393 11053802 Murru_0981 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787450.1 1083281 D 886377 CDS YP_004787451.1 344202308 11053803 complement(1084318..1085373) 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG5002 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: rbi:RB2501_08410 sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 1085373 11053803 Murru_0982 Muricauda ruestringensis DSM 13258 integral membrane sensor signal transduction histidine kinase YP_004787451.1 1084318 R 886377 CDS YP_004787452.1 344202309 11053804 complement(1085373..1086059) 1 NC_015945.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: fbc:FB2170_07794 response regulator DrrA; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SPTR: Response regulator DrrA; two component winged helix family transcriptional regulator 1086059 11053804 Murru_0983 Muricauda ruestringensis DSM 13258 two component winged helix family transcriptional regulator YP_004787452.1 1085373 R 886377 CDS YP_004787453.1 344202310 11053805 1086272..1088641 1 NC_015945.1 KEGG: amc:MADE_03437 putative lipoprotein; SPTR: Putative lipoprotein; putative lipoprotein 1088641 11053805 Murru_0984 Muricauda ruestringensis DSM 13258 putative lipoprotein YP_004787453.1 1086272 D 886377 CDS YP_004787454.1 344202311 11053806 1088739..1091564 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: mtt:Ftrac_2803 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Outer membrane protein, putative; TonB-dependent receptor 1091564 11053806 Murru_0985 Muricauda ruestringensis DSM 13258 TonB-dependent receptor YP_004787454.1 1088739 D 886377 CDS YP_004787455.1 344202312 11053807 1091718..1092029 1 NC_015945.1 KEGG: rbi:RB2501_08400 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1092029 11053807 Murru_0986 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787455.1 1091718 D 886377 CDS YP_004787456.1 344202313 11053808 complement(1091928..1092125) 1 NC_015945.1 hypothetical protein 1092125 11053808 Murru_0987 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787456.1 1091928 R 886377 CDS YP_004787457.1 344202314 11053809 1092176..1092499 1 NC_015945.1 KEGG: fbc:FB2170_07784 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1092499 11053809 Murru_0988 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787457.1 1092176 D 886377 CDS YP_004787458.1 344202315 11053810 1092563..1093549 1 NC_015945.1 PFAM: Acyl-protein synthetase, LuxE; KEGG: fbc:FB2170_07779 putative acyl protein synthase/acyl-CoA reductase-like protein; SPTR: Possible acyl protein synthase/acyl-CoA reductase-like protein; putative acyl protein synthase/acyl-CoA reductase-like protein 1093549 11053810 Murru_0989 Muricauda ruestringensis DSM 13258 putative acyl protein synthase/acyl-CoA reductase-like protein YP_004787458.1 1092563 D 886377 CDS YP_004787459.1 344202316 11053811 complement(1093551..1094846) 1 NC_015945.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase; COGs: COG0162 Tyrosyl-tRNA synthetase; HAMAP: Tyrosyl-tRNA synthetase, class Ib; InterPro IPR002305:IPR002307; KEGG: fbc:FB2170_07774 tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; PRIAM: Tyrosine--tRNA ligase; SPTR: Tyrosyl-tRNA synthetase; TIGRFAM: Tyrosyl-tRNA synthetase, class Ib; tyrosyl-tRNA synthetase 1094846 11053811 Murru_0990 Muricauda ruestringensis DSM 13258 tyrosyl-tRNA synthetase YP_004787459.1 1093551 R 886377 CDS YP_004787460.1 344202317 11053812 1094932..1095936 1 NC_015945.1 PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: fbc:FB2170_07769 3-beta hydroxysteroid dehydrogenase/isomerase family protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: 3-beta hydroxysteroid dehydrogenase/isomerase family protein; NAD-dependent epimerase/dehydratase 1095936 11053812 Murru_0991 Muricauda ruestringensis DSM 13258 NAD-dependent epimerase/dehydratase YP_004787460.1 1094932 D 886377 CDS YP_004787461.1 344202318 11053813 complement(1095920..1096363) 1 NC_015945.1 KEGG: fbc:FB2170_07764 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1096363 11053813 Murru_0992 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787461.1 1095920 R 886377 CDS YP_004787462.1 344202319 11053814 complement(1096367..1097701) 1 NC_015945.1 PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type; COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR006680; KEGG: fbc:FB2170_07759 dihydroorotase; PFAM: Amidohydrolase 1; PRIAM: Allantoinase; SPTR: Dihydroorotase; Allantoinase 1097701 11053814 Murru_0993 Muricauda ruestringensis DSM 13258 Allantoinase YP_004787462.1 1096367 R 886377 CDS YP_004787463.1 344202320 11053815 complement(1097704..1098432) 1 NC_015945.1 PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fbc:FB2170_07754 dolichol-phosphate mannosyltransferase; PFAM: Glycosyl transferase, family 2; PRIAM: Dolichyl-phosphate beta-D-mannosyltransferase; SPTR: Dolichol-phosphate mannosyltransferase; dolichyl-phosphate beta-D-mannosyltransferase 1098432 11053815 Murru_0994 Muricauda ruestringensis DSM 13258 dolichyl-phosphate beta-D-mannosyltransferase YP_004787463.1 1097704 R 886377 CDS YP_004787464.1 344202321 11053816 1098554..1100209 1 NC_015945.1 COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; KEGG: fbc:FB2170_07749 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1100209 11053816 Murru_0995 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787464.1 1098554 D 886377 CDS YP_004787465.1 344202322 11053817 1100209..1100865 1 NC_015945.1 KEGG: fbc:FB2170_07744 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1100865 11053817 Murru_0996 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787465.1 1100209 D 886377 CDS YP_004787466.1 344202323 11053818 1100872..1101615 1 NC_015945.1 PFAM: Uroporphyrinogen-III synthase HemD; COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: fbc:FB2170_07739 putative uroporphyrinogen-III synthase; PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; SPTR: Possible uroporphyrinogen-III synthase; uroporphyrinogen III synthase HEM4 1101615 11053818 Murru_0997 Muricauda ruestringensis DSM 13258 uroporphyrinogen III synthase HEM4 YP_004787466.1 1100872 D 886377 CDS YP_004787467.1 344202324 11053819 complement(1101684..1103300) 1 NC_015945.1 PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); COGs: COG1866 Phosphoenolpyruvate carboxykinase (ATP); HAMAP: Phosphoenolpyruvate carboxykinase, ATP-utilising; InterPro IPR001272; KEGG: fbc:FB2170_07734 phosphoenolpyruvate carboxykinase; PFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; SPTR: Phosphoenolpyruvate carboxykinase [ATP] 1; TIGRFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; phosphoenolpyruvate carboxykinase 1103300 11053819 Murru_0998 Muricauda ruestringensis DSM 13258 phosphoenolpyruvate carboxykinase YP_004787467.1 1101684 R 886377 CDS YP_004787468.1 344202325 11053820 complement(1103364..1103756) 1 NC_015945.1 PFAM: Protein of unknown function (DUF423); COGs: COG2363 Uncharacterized small membrane protein; InterPro IPR006696; KEGG: fbc:FB2170_07729 hypothetical protein; PFAM: Protein of unknown function DUF423; SPTR: Putative uncharacterized protein; hypothetical protein 1103756 11053820 Murru_0999 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787468.1 1103364 R 886377 CDS YP_004787469.1 344202326 11053821 1103836..1105209 1 NC_015945.1 PFAM: Saccharopine dehydrogenase; COGs: COG1748 Saccharopine dehydrogenase and related protein; InterPro IPR005097; KEGG: fbc:FB2170_07724 saccharopine dehydrogenase; PFAM: Saccharopine dehydrogenase / Homospermidine synthase; PRIAM: Saccharopine dehydrogenase (NADP(+), L-glutamate-forming); SPTR: Saccharopine dehydrogenase, putative; saccharopine dehydrogenase 1105209 11053821 Murru_1000 Muricauda ruestringensis DSM 13258 saccharopine dehydrogenase YP_004787469.1 1103836 D 886377 CDS YP_004787470.1 344202327 11053822 1105258..1105728 1 NC_015945.1 PFAM: Bacterial regulatory protein, arsR family; AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019887:IPR019888; KEGG: rbi:RB2501_08330 putative AsnC-family transcriptional regulatory protein; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; SPTR: Putative AsnC-family transcriptional regulatory protein; AsnC family transcriptional regulator 1105728 11053822 Murru_1001 Muricauda ruestringensis DSM 13258 AsnC family transcriptional regulator YP_004787470.1 1105258 D 886377 CDS YP_004787471.1 344202328 11053823 1105768..1106088 1 NC_015945.1 KEGG: phe:Phep_0799 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1106088 11053823 Murru_1002 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787471.1 1105768 D 886377 CDS YP_004787472.1 344202329 11053824 1106197..1106715 1 NC_015945.1 PFAM: Ferritin-like domain; COGs: COG1528 Ferritin-like protein; InterPro IPR008331; KEGG: zpr:ZPR_0482 ferritin-like protein; PFAM: Ferritin/Dps protein; SPTR: Ferritin-like protein; ferritin Dps family protein 1106715 11053824 Murru_1003 Muricauda ruestringensis DSM 13258 ferritin Dps family protein YP_004787472.1 1106197 D 886377 CDS YP_004787473.1 344202330 11053825 complement(1106873..1107415) 1 NC_015945.1 PFAM: DinB family; KEGG: fbc:FB2170_04375 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1107415 11053825 Murru_1004 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787473.1 1106873 R 886377 CDS YP_004787474.1 344202331 11053826 complement(1107425..1107766) 1 NC_015945.1 PFAM: HxlR-like helix-turn-helix; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: cps:CPS_3596 putative transcriptional regulator; PFAM: Helix-turn-helix, HxlR type; SPTR: Putative transcriptional regulator; HxlR family transcriptional regulator 1107766 11053826 Murru_1005 Muricauda ruestringensis DSM 13258 HxlR family transcriptional regulator YP_004787474.1 1107425 R 886377 CDS YP_004787475.1 344202332 11053827 complement(1107896..1108597) 1 NC_015945.1 PFAM: Putative neutral zinc metallopeptidase; COGs: COG2738 Zn-dependent protease; InterPro IPR007395; KEGG: fbc:FB2170_07714 hypothetical protein; PFAM: Peptidase, membrane zinc metallopeptidase, putative; SPTR: Putative uncharacterized protein; peptidase membrane zinc metallopeptidase 1108597 11053827 Murru_1006 Muricauda ruestringensis DSM 13258 peptidase membrane zinc metallopeptidase YP_004787475.1 1107896 R 886377 CDS YP_004787476.1 344202333 11053828 complement(1108695..1109795) 1 NC_015945.1 PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase; COGs: COG0686 Alanine dehydrogenase; InterPro IPR007886:IPR007698:IPR008141; KEGG: rbi:RB2501_08320 putative alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal; PRIAM: Alanine dehydrogenase; SPTR: Putative alanine dehydrogenase; TIGRFAM: Alanine dehydrogenase/pyridine nucleotide transhydrogenase; alanine dehydrogenase 1109795 11053828 Murru_1007 Muricauda ruestringensis DSM 13258 alanine dehydrogenase YP_004787476.1 1108695 R 886377 CDS YP_004787477.1 344202334 11053829 complement(1109806..1109907) 1 NC_015945.1 hypothetical protein 1109907 11053829 Murru_1008 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787477.1 1109806 R 886377 CDS YP_004787478.1 344202335 11053830 complement(1110049..1110159) 1 NC_015945.1 hypothetical protein 1110159 11053830 Murru_1009 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787478.1 1110049 R 886377 CDS YP_004787479.1 344202336 11053831 complement(1110181..1113240) 1 NC_015945.1 PFAM: tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (M); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; COGs: COG0495 Leucyl-tRNA synthetase; InterPro IPR015413:IPR002300:IPR013155:IPR002302; KEGG: fbc:FB2170_07704 leucyl-tRNA synthetase; PFAM: Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Aminoacyl-tRNA synthetase, class I (M); Aminoacyl-tRNA synthetase, class Ia; PRIAM: Leucine--tRNA ligase; SPTR: Leucyl-tRNA synthetase; TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; leucyl-tRNA synthetase 1113240 11053831 Murru_1010 Muricauda ruestringensis DSM 13258 leucyl-tRNA synthetase YP_004787479.1 1110181 R 886377 CDS YP_004787480.1 344202337 11053832 1113330..1114208 1 NC_015945.1 PFAM: Predicted permease; COGs: COG2177 Cell division protein; InterPro IPR003838; KEGG: fbc:FB2170_07694 putative cell division protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative cell division protein; hypothetical protein 1114208 11053832 Murru_1011 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787480.1 1113330 D 886377 CDS YP_004787481.1 344202338 11053833 1114218..1114484 1 NC_015945.1 PFAM: Protein of unknown function (DUF3098); KEGG: fbc:FB2170_07689 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1114484 11053833 Murru_1012 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787481.1 1114218 D 886377 CDS YP_004787482.1 344202339 11053834 1114486..1115280 1 NC_015945.1 PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP; COGs: COG1968 Uncharacterized bacitracin resistance protein; HAMAP: Bacitracin resistance protein BacA; InterPro IPR003824; KEGG: fbc:FB2170_07684 putative bacitracin resistance protein; PFAM: Bacitracin resistance protein BacA; SPTR: Undecaprenyl-diphosphatase; undecaprenyl-diphosphatase 1115280 11053834 Murru_1013 Muricauda ruestringensis DSM 13258 undecaprenyl-diphosphatase YP_004787482.1 1114486 D 886377 CDS YP_004787483.1 344202340 11053835 1115312..1116016 1 NC_015945.1 PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase II, TruB; InterPro IPR002501:IPR014780; KEGG: fbc:FB2170_07679 putative tRNA pseudouridine synthase; PFAM: Pseudouridine synthase II; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase II, TruB; tRNA pseudouridine synthase B 1116016 11053835 Murru_1014 Muricauda ruestringensis DSM 13258 tRNA pseudouridine synthase B YP_004787483.1 1115312 D 886377 CDS YP_004787484.1 344202341 11053836 1116065..1116784 1 NC_015945.1 TIGRFAM: TonB family C-terminal domain; KEGG: rbi:RB2501_08285 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1116784 11053836 Murru_1015 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787484.1 1116065 D 886377 CDS YP_004787485.1 344202342 11053837 complement(1116767..1117447) 1 NC_015945.1 KEGG: fbc:FB2170_07669 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1117447 11053837 Murru_1016 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787485.1 1116767 R 886377 CDS YP_004787486.1 344202343 11053838 complement(1117471..1118886) 1 NC_015945.1 PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; KEGG: rbi:RB2501_08275 outer membrane efflux protein; SPTR: Putative uncharacterized protein; outer membrane efflux protein 1118886 11053838 Murru_1017 Muricauda ruestringensis DSM 13258 outer membrane efflux protein YP_004787486.1 1117471 R 886377 CDS YP_004787487.1 344202344 11053839 complement(1118870..1120225) 1 NC_015945.1 COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR000089; KEGG: rbi:RB2501_08270 hypothetical protein; PFAM: Biotin/lipoyl attachment; SPTR: Putative uncharacterized protein; biotin/lipoyl attachment domain-containing protein 1120225 11053839 Murru_1018 Muricauda ruestringensis DSM 13258 biotin/lipoyl attachment domain-containing protein YP_004787487.1 1118870 R 886377 CDS YP_004787488.1 344202345 11053840 complement(1120231..1121898) 1 NC_015945.1 PFAM: ABC transporter; ABC transporter transmembrane region; Bacterial protein of unknown function (DUF939); COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR003439; KEGG: rbi:RB2501_08265 HlyB/MsbA family ABC transporter; PFAM: ABC transporter-like; PRIAM: Xenobiotic-transporting ATPase; SPTR: HlyB/MsbA family ABC transporter; xenobiotic-transporting ATPase 1121898 11053840 Murru_1019 Muricauda ruestringensis DSM 13258 xenobiotic-transporting ATPase YP_004787488.1 1120231 R 886377 CDS YP_004787489.1 344202346 11053841 complement(1121891..1122565) 1 NC_015945.1 InterPro IPR001647; KEGG: fbc:FB2170_07659 hypothetical protein; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Putative uncharacterized protein; regulatory protein TetR 1122565 11053841 Murru_1020 Muricauda ruestringensis DSM 13258 regulatory protein TetR YP_004787489.1 1121891 R 886377 CDS YP_004787490.1 344202347 11053842 1122697..1123260 1 NC_015945.1 PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I; COGs: COG2818 3-methyladenine DNA glycosylase; InterPro IPR005019:IPR004597; KEGG: zpr:ZPR_4445 DNA-3-methyladenine glycosylase; PFAM: Methyladenine glycosylase; PRIAM: DNA-3-methyladenine glycosylase I; SPTR: DNA-3-methyladenine glycosidase I; TIGRFAM: DNA-3-methyladenine glycosylase I; DNA-3-methyladenine glycosylase I 1123260 11053842 Murru_1021 Muricauda ruestringensis DSM 13258 DNA-3-methyladenine glycosylase I YP_004787490.1 1122697 D 886377 CDS YP_004787491.1 344202348 11053843 complement(1123294..1123950) 1 NC_015945.1 PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase; COGs: COG2360 Leu/Phe-tRNA-protein transferase; HAMAP: Leucyl/phenylalanyl-tRNA-protein transferase; InterPro IPR004616; KEGG: fbc:FB2170_07614 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: Leucyl/phenylalanyl-tRNA-protein transferase; PRIAM: Leucyltransferase; SPTR: Leucyl/phenylalanyl-tRNA--protein transferase; TIGRFAM: Leucyl/phenylalanyl-tRNA-protein transferase; leucyl/phenylalanyl-tRNA--protein transferase 1123950 11053843 Murru_1022 Muricauda ruestringensis DSM 13258 leucyl/phenylalanyl-tRNA--protein transferase YP_004787491.1 1123294 R 886377 CDS YP_004787492.1 344202349 11053844 complement(1124039..1124416) 1 NC_015945.1 PFAM: Protein of unknown function (DUF3127); KEGG: fbc:FB2170_07609 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1124416 11053844 Murru_1023 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787492.1 1124039 R 886377 CDS YP_004787493.1 344202350 11053845 1124539..1125690 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: fbc:FB2170_07594 sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Sensor histidine kinase; manually curated; integral membrane sensor signal transduction histidine kinase 1125690 11053845 Murru_1024 Muricauda ruestringensis DSM 13258 integral membrane sensor signal transduction histidine kinase YP_004787493.1 1124539 D 886377 CDS YP_004787494.1 344202351 11053846 1125694..1126038 1 NC_015945.1 KEGG: fbc:FB2170_07589 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1126038 11053846 Murru_1025 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787494.1 1125694 D 886377 CDS YP_004787495.1 344202352 11053847 complement(1126035..1126424) 1 NC_015945.1 PFAM: HIT domain; COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: cat:CA2559_01700 HIT family protein; PFAM: Histidine triad (HIT) protein; SPTR: HIT family protein; histidine triad (HIT) protein 1126424 11053847 Murru_1026 Muricauda ruestringensis DSM 13258 histidine triad (HIT) protein YP_004787495.1 1126035 R 886377 CDS YP_004787496.1 344202353 11053848 complement(1126493..1126969) 1 NC_015945.1 PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA; COGs: COG0782 Transcription elongation factor; HAMAP: Transcription elongation factor greA; InterPro IPR022691:IPR001437:IPR006359; KEGG: rbi:RB2501_08190 transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB, N-terminal; Transcription elongation factor, GreA/GreB, C-terminal; SPTR: Transcription elongation factor; TIGRFAM: Transcription elongation factor GreA; transcription elongation factor GreA 1126969 11053848 Murru_1027 Muricauda ruestringensis DSM 13258 transcription elongation factor GreA YP_004787496.1 1126493 R 886377 CDS YP_004787497.1 344202354 11053849 1127066..1127590 1 NC_015945.1 KEGG: rbi:RB2501_08185 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1127590 11053849 Murru_1028 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787497.1 1127066 D 886377 CDS YP_004787498.1 344202355 11053850 1127600..1128586 1 NC_015945.1 PFAM: Aldo/keto reductase family; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR023210; KEGG: fjo:Fjoh_2503 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain; SPTR: Aldo/keto reductase; NADP-dependent oxidoreductase domain-containing protein 1128586 11053850 Murru_1029 Muricauda ruestringensis DSM 13258 NADP-dependent oxidoreductase domain-containing protein YP_004787498.1 1127600 D 886377 CDS YP_004787499.1 344202356 11053851 complement(1128735..1130984) 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_07564 hypothetical protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Putative uncharacterized protein; TonB-dependent receptor 1130984 11053851 Murru_1030 Muricauda ruestringensis DSM 13258 TonB-dependent receptor YP_004787499.1 1128735 R 886377 CDS YP_004787500.1 344202357 11053852 1131261..1133699 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; CHASE3 domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR001789; KEGG: cat:CA2559_01510 two-component system sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; SPTR: Two-component system sensor histidine kinase; multi-sensor hybrid histidine kinase 1133699 11053852 Murru_1031 Muricauda ruestringensis DSM 13258 multi-sensor hybrid histidine kinase YP_004787500.1 1131261 D 886377 CDS YP_004787501.1 344202358 11053853 complement(1133674..1135017) 1 NC_015945.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR002078:IPR002197:IPR003593; KEGG: fjo:Fjoh_0638 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; two component sigma-54 specific Fis family transcriptional regulator 1135017 11053853 Murru_1032 Muricauda ruestringensis DSM 13258 two component sigma-54 specific Fis family transcriptional regulator YP_004787501.1 1133674 R 886377 CDS YP_004787502.1 344202359 11053854 complement(1135149..1135451) 1 NC_015945.1 PFAM: Protein of unknown function (DUF2874); KEGG: rbi:RB2501_08160 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1135451 11053854 Murru_1033 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787502.1 1135149 R 886377 CDS YP_004787503.1 344202360 11053855 1135798..1136025 1 NC_015945.1 hypothetical protein 1136025 11053855 Murru_1034 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787503.1 1135798 D 886377 CDS YP_004787504.1 344202361 11053856 complement(1136281..1137819) 1 NC_015945.1 KEGG: fbc:FB2170_07559 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1137819 11053856 Murru_1035 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787504.1 1136281 R 886377 CDS YP_004787505.1 344202362 11053857 complement(1137812..1138381) 1 NC_015945.1 TIGRFAM: nicotinamide-nucleotide adenylyltransferase, NadR type; COGs: COG3172 ATPase/kinase involved in NAD metabolism; KEGG: fbc:FB2170_07554 putative transcriptional regulatory protein NadR; SPTR: NadR-like transcriptional regulator; putative transcriptional regulatory protein NadR 1138381 11053857 Murru_1036 Muricauda ruestringensis DSM 13258 putative transcriptional regulatory protein NadR YP_004787505.1 1137812 R 886377 CDS YP_004787506.1 344202363 11053858 complement(1138342..1138977) 1 NC_015945.1 PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC; COGs: COG3201 Nicotinamide mononucleotide transporter; InterPro IPR006419; KEGG: rbi:RB2501_08150 hypothetical protein; PFAM: Nicotinamide mononucleotide transporter PnuC; SPTR: Putative uncharacterized protein; TIGRFAM: Nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC 1138977 11053858 Murru_1037 Muricauda ruestringensis DSM 13258 nicotinamide mononucleotide transporter PnuC YP_004787506.1 1138342 R 886377 CDS YP_004787507.1 344202364 11053859 complement(1138961..1139221) 1 NC_015945.1 PFAM: Domain of unknown function DUF77; KEGG: fbc:FB2170_07544 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1139221 11053859 Murru_1038 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787507.1 1138961 R 886377 CDS YP_004787508.1 344202365 11053860 complement(1139261..1139902) 1 NC_015945.1 PFAM: 4'-phosphopantetheinyl transferase superfamily; KEGG: fbc:FB2170_07539 siderophore (surfactin) biosynthesis regulatory protein; SPTR: Siderophore (Surfactin) biosynthesis regulatory protein; siderophore (surfactin) biosynthesis regulatory protein 1139902 11053860 Murru_1039 Muricauda ruestringensis DSM 13258 siderophore (surfactin) biosynthesis regulatory protein YP_004787508.1 1139261 R 886377 CDS YP_004787509.1 344202366 11053861 1139977..1141293 1 NC_015945.1 PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase; COGs: COG0499 S-adenosylhomocysteine hydrolase; HAMAP: Adenosylhomocysteinase; InterPro IPR000043:IPR015878; KEGG: fbc:FB2170_07534 S-adenosyl-L-homocysteine hydrolase; PFAM: Adenosylhomocysteinase; S-adenosyl-L-homocysteine hydrolase, NAD binding; PRIAM: Adenosylhomocysteinase; SPTR: Adenosylhomocysteinase; TIGRFAM: Adenosylhomocysteinase; adenosylhomocysteinase 1141293 11053861 Murru_1040 Muricauda ruestringensis DSM 13258 adenosylhomocysteinase YP_004787509.1 1139977 D 886377 CDS YP_004787510.1 344202367 11053862 complement(1141364..1141942) 1 NC_015945.1 PFAM: Domain of unknown function (DUF3332); KEGG: rbi:RB2501_08130 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1141942 11053862 Murru_1041 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787510.1 1141364 R 886377 CDS YP_004787511.1 344202368 11053863 1142076..1143185 1 NC_015945.1 PFAM: Alanine racemase, N-terminal domain; COGs: COG3616 amino acid aldolase or racemase; InterPro IPR001608; KEGG: dfe:Dfer_1026 alanine racemase domain protein; PFAM: Alanine racemase, N-terminal; SPTR: Alanine racemase domain protein; alanine racemase domain-containing protein 1143185 11053863 Murru_1042 Muricauda ruestringensis DSM 13258 alanine racemase domain-containing protein YP_004787511.1 1142076 D 886377 CDS YP_004787512.1 344202369 11053864 1143356..1143994 1 NC_015945.1 hypothetical protein 1143994 11053864 Murru_1043 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787512.1 1143356 D 886377 CDS YP_004787513.1 344202370 11053866 complement(1144443..1144703) 1 NC_015945.1 PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; COGs: COG0211 Ribosomal protein L27; HAMAP: Ribosomal protein L27; InterPro IPR001684; KEGG: fbc:FB2170_07524 50S ribosomal protein L27; PFAM: Ribosomal protein L27; SPTR: 50S ribosomal protein L27; TIGRFAM: Ribosomal protein L27; 50S ribosomal protein L27 1144703 11053866 Murru_1045 Muricauda ruestringensis DSM 13258 50S ribosomal protein L27 YP_004787513.1 1144443 R 886377 CDS YP_004787514.1 344202371 11053867 complement(1144728..1145273) 1 NC_015945.1 PFAM: Ribosomal prokaryotic L21 protein; Rho termination factor, N-terminal domain; TIGRFAM: ribosomal protein L21; COGs: COG0261 Ribosomal protein L21; HAMAP: Ribosomal protein L21; InterPro IPR001787:IPR011112; KEGG: rbi:RB2501_08120 putative 50S ribosomal protein L21; PFAM: Ribosomal protein L21; Rho termination factor, N-terminal; SMART: Rho termination factor, N-terminal; SPTR: 50S ribosomal protein L21; TIGRFAM: Ribosomal protein L21; 50S ribosomal protein L21 1145273 11053867 Murru_1046 Muricauda ruestringensis DSM 13258 50S ribosomal protein L21 YP_004787514.1 1144728 R 886377 CDS YP_004787515.1 344202372 11053868 complement(1145369..1145824) 1 NC_015945.1 KEGG: rbi:RB2501_08115 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1145824 11053868 Murru_1047 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787515.1 1145369 R 886377 CDS YP_004787516.1 344202373 11053869 1146007..1147329 1 NC_015945.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: fbc:FB2170_07514 putative zinc protease; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; SPTR: Probable peptidase; peptidase M16 domain-containing protein 1147329 11053869 Murru_1048 Muricauda ruestringensis DSM 13258 peptidase M16 domain-containing protein YP_004787516.1 1146007 D 886377 CDS YP_004787517.1 344202374 11053870 1147331..1149403 1 NC_015945.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: fbc:FB2170_07509 putative metallopeptidase, M16 family protein; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; SPTR: Putative metallopeptidase, M16 family protein; peptidase M16 domain-containing protein 1149403 11053870 Murru_1049 Muricauda ruestringensis DSM 13258 peptidase M16 domain-containing protein YP_004787517.1 1147331 D 886377 CDS YP_004787518.1 344202375 11053871 complement(1149577..1151673) 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent copper receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_14943 TonB dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB dependent receptor, putative; TonB-dependent receptor 1151673 11053871 Murru_1050 Muricauda ruestringensis DSM 13258 TonB-dependent receptor YP_004787518.1 1149577 R 886377 CDS YP_004787519.1 344202376 11053872 complement(1151754..1152077) 1 NC_015945.1 KEGG: fbc:FB2170_14938 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 1152077 11053872 Murru_1051 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787519.1 1151754 R 886377 CDS YP_004787520.1 344202377 11053873 1152281..1152715 1 NC_015945.1 KEGG: fbc:FB2170_07489 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1152715 11053873 Murru_1052 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787520.1 1152281 D 886377 CDS YP_004787521.1 344202378 11053874 complement(1152722..1153279) 1 NC_015945.1 TIGRFAM: gliding motility-associated lipoprotein GldD; InterPro IPR019850; KEGG: rbi:RB2501_08085 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Gliding motility-associated lipoprotein, GldD; gliding motility-associated lipoprotein GldD 1153279 11053874 Murru_1053 Muricauda ruestringensis DSM 13258 gliding motility-associated lipoprotein GldD YP_004787521.1 1152722 R 886377 CDS YP_004787522.1 344202379 11053875 complement(1153269..1154579) 1 NC_015945.1 PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; TIGRFAM: gliding motility-associated protein GldE; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550:IPR000644:IPR005170:IPR019862; KEGG: fbc:FB2170_07479 putative transmembrane CorC/HlyC family transporter associated protein; PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated domain; SMART: Cystathionine beta-synthase, core; SPTR: Putative transmembrane CorC/HlyC family transporter associated protein; TIGRFAM: Gliding motility-associated protein GldE; gliding motility-associated protein GldE 1154579 11053875 Murru_1054 Muricauda ruestringensis DSM 13258 gliding motility-associated protein GldE YP_004787522.1 1153269 R 886377 CDS YP_004787523.1 344202380 11053876 complement(1154607..1155068) 1 NC_015945.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424:IPR011344; KEGG: fbc:FB2170_07474 single-strand binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; single-strand binding protein 1155068 11053876 Murru_1055 Muricauda ruestringensis DSM 13258 single-strand binding protein YP_004787523.1 1154607 R 886377 CDS YP_004787524.1 344202381 11053877 complement(1155254..1156291) 1 NC_015945.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase; COGs: COG1194 A/G-specific DNA glycosylase; InterPro IPR003265:IPR003651:IPR005760; KEGG: fbc:FB2170_07469 A/G-specific adenine glycosylase; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; SMART: HhH-GPD domain; SPTR: A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase MutY, bacterial form; A/G-specific adenine glycosylase 1156291 11053877 Murru_1056 Muricauda ruestringensis DSM 13258 A/G-specific adenine glycosylase YP_004787524.1 1155254 R 886377 CDS YP_004787525.1 344202382 11053878 1156416..1156706 1 NC_015945.1 PFAM: Bacterial DNA-binding protein; COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: fbc:FB2170_07464 DNA-binding protein HU; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; SPTR: Histone family protein DNA-binding protein; histone family protein DNA-binding protein 1156706 11053878 Murru_1057 Muricauda ruestringensis DSM 13258 histone family protein DNA-binding protein YP_004787525.1 1156416 D 886377 CDS YP_004787526.1 344202383 11053879 1156977..1158527 1 NC_015945.1 PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; COGs: COG1530 Ribonuclease G and E; InterPro IPR019307:IPR004659; KEGG: fbc:FB2170_07459 ribonuclease G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; SPTR: Ribonuclease G; TIGRFAM: Ribonuclease E/G; Rne/Rng family ribonuclease 1158527 11053879 Murru_1058 Muricauda ruestringensis DSM 13258 Rne/Rng family ribonuclease YP_004787526.1 1156977 D 886377 CDS YP_004787527.1 344202384 11053880 1158615..1160984 1 NC_015945.1 COGs: COG3408 Glycogen debranching protein; KEGG: rbi:RB2501_08055 putative glycogen debranching enzyme; SPTR: Predicted glycogen debranching enzyme; putative glycogen debranching protein 1160984 11053880 Murru_1059 Muricauda ruestringensis DSM 13258 putative glycogen debranching protein YP_004787527.1 1158615 D 886377 CDS YP_004787528.1 344202385 11053881 1160991..1161476 1 NC_015945.1 PFAM: RecX family; COGs: COG2137 conserved hypothetical protein; InterPro IPR003783; KEGG: fbc:FB2170_07449 putative transcriptional regulatory protein; PFAM: Regulatory protein RecX; SPTR: Regulatory protein RecX; regulatory protein RecX 1161476 11053881 Murru_1060 Muricauda ruestringensis DSM 13258 regulatory protein RecX YP_004787528.1 1160991 D 886377 CDS YP_004787529.1 344202386 11053882 complement(1161485..1162354) 1 NC_015945.1 InterPro IPR003347; KEGG: fbc:FB2170_07444 hypothetical protein; SMART: Transcription factor jumonji/aspartyl beta-hydroxylase; SPTR: JmjC domain protein; transcription factor jumonji jmjC domain-containing protein 1162354 11053882 Murru_1061 Muricauda ruestringensis DSM 13258 transcription factor jumonji jmjC domain-containing protein YP_004787529.1 1161485 R 886377 CDS YP_004787530.1 344202387 11053884 complement(1162521..1164350) 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_07439 TonB-dependent receptor domain-containing protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor domain protein; TonB-dependent receptor 1164350 11053884 Murru_1063 Muricauda ruestringensis DSM 13258 TonB-dependent receptor YP_004787530.1 1162521 R 886377 CDS YP_004787531.1 344202388 11053885 1164438..1165934 1 NC_015945.1 PFAM: Bacterial regulatory proteins, gntR family; COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR000524; KEGG: fbc:FB2170_07434 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family, with aminotransferase domain; GntR family transcriptional regulator 1165934 11053885 Murru_1064 Muricauda ruestringensis DSM 13258 GntR family transcriptional regulator YP_004787531.1 1164438 D 886377 CDS YP_004787532.1 344202389 11053886 1166191..1167687 1 NC_015945.1 PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: fbc:FB2170_07429 hypothetical protein; PFAM: Glycosyl transferase, family 39; SPTR: Putative uncharacterized protein; glycosyl transferase family protein 1167687 11053886 Murru_1065 Muricauda ruestringensis DSM 13258 glycosyl transferase family protein YP_004787532.1 1166191 D 886377 CDS YP_004787533.1 344202390 11053887 1167861..1169543 1 NC_015945.1 PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: afw:Anae109_0521 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 39; SPTR: Glycosyl transferase family 39; glycosyl transferase family protein 1169543 11053887 Murru_1066 Muricauda ruestringensis DSM 13258 glycosyl transferase family protein YP_004787533.1 1167861 D 886377 CDS YP_004787534.1 344202391 11053889 complement(1169944..1170330) 1 NC_015945.1 KEGG: fbc:FB2170_07424 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1170330 11053889 Murru_1068 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787534.1 1169944 R 886377 CDS YP_004787535.1 344202392 11053890 complement(1170327..1170509) 1 NC_015945.1 hypothetical protein 1170509 11053890 Murru_1069 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787535.1 1170327 R 886377 CDS YP_004787536.1 344202393 11053891 1170574..1172370 1 NC_015945.1 PFAM: M61 glycyl aminopeptidase; COGs: COG3975 protease with the C-terminal PDZ domain; InterPro IPR007963:IPR001478; KEGG: fbc:FB2170_07419 hypothetical protein; PFAM: Peptidase M61; SMART: PDZ/DHR/GLGF; SPTR: Putative uncharacterized protein; peptidase M61 domain-containing protein 1172370 11053891 Murru_1070 Muricauda ruestringensis DSM 13258 peptidase M61 domain-containing protein YP_004787536.1 1170574 D 886377 CDS YP_004787537.1 344202394 11053892 1172371..1172901 1 NC_015945.1 PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: mxa:MXAN_2839 acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Acetyltransferase, GNAT family; N-acetyltransferase GCN5 1172901 11053892 Murru_1071 Muricauda ruestringensis DSM 13258 N-acetyltransferase GCN5 YP_004787537.1 1172371 D 886377 CDS YP_004787538.1 344202395 11053893 complement(1173107..1174249) 1 NC_015945.1 PFAM: Putative esterase; KEGG: fbc:FB2170_07364 putative hydrolase; SPTR: Predicted hydrolase of the alpha/beta superfamily protein; putative hydrolase 1174249 11053893 Murru_1072 Muricauda ruestringensis DSM 13258 putative hydrolase YP_004787538.1 1173107 R 886377 CDS YP_004787539.1 344202396 11053894 complement(1174275..1175240) 1 NC_015945.1 PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; InterPro IPR022791:IPR005242; KEGG: fbc:FB2170_07369 putative dolichol-P-glucose synthetase; PFAM: Lysylphosphatidylglycerol synthetase/UPF0104; SPTR: Putative dolichol-P-glucose synthetase; lysylphosphatidylglycerol synthetase 1175240 11053894 Murru_1073 Muricauda ruestringensis DSM 13258 lysylphosphatidylglycerol synthetase YP_004787539.1 1174275 R 886377 CDS YP_004787540.1 344202397 11053895 complement(1175244..1175594) 1 NC_015945.1 PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase; COGs: COG0853 Aspartate 1-decarboxylase; HAMAP: Aspartate decarboxylase; InterPro IPR003190; KEGG: rbi:RB2501_07965 aspartate alpha-decarboxylase; PFAM: Aspartate decarboxylase; PRIAM: Aspartate 1-decarboxylase; SPTR: Aspartate 1-decarboxylase; TIGRFAM: Aspartate decarboxylase; aspartate 1-decarboxylase 1175594 11053895 Murru_1074 Muricauda ruestringensis DSM 13258 aspartate 1-decarboxylase YP_004787540.1 1175244 R 886377 CDS YP_004787541.1 344202398 11053896 complement(1175607..1176455) 1 NC_015945.1 PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain; COGs: COG0414 Panthothenate synthetase; HAMAP: Pantoate-beta-alanine ligase; InterPro IPR003721:IPR004821; KEGG: rbi:RB2501_07970 putative pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; SPTR: Pantothenate synthetase; TIGRFAM: Pantoate-beta-alanine ligase; Cytidyltransferase-related; pantothenate synthetase 1176455 11053896 Murru_1075 Muricauda ruestringensis DSM 13258 pantothenate synthetase YP_004787541.1 1175607 R 886377 CDS YP_004787542.1 344202399 11053897 1176519..1177367 1 NC_015945.1 PFAM: Starch synthase catalytic domain; COGs: COG0297 Glycogen synthase; InterPro IPR013534; KEGG: fbc:FB2170_07384 glycogen synthase-like protein; PFAM: Starch synthase, catalytic domain; PRIAM: Starch synthase; SPTR: Glycogen synthase-related protein; starch synthase 1177367 11053897 Murru_1076 Muricauda ruestringensis DSM 13258 starch synthase YP_004787542.1 1176519 D 886377 CDS YP_004787543.1 344202400 11053898 1177373..1179181 1 NC_015945.1 KEGG: fbc:FB2170_07389 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1179181 11053898 Murru_1077 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787543.1 1177373 D 886377 CDS YP_004787544.1 344202401 11053899 1179306..1181153 1 NC_015945.1 PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing); COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains; HAMAP: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; InterPro IPR000583:IPR001347:IPR005855; KEGG: fbc:FB2170_07394 glucosamine--fructose-6-phosphate aminotransferase; PFAM: Sugar isomerase (SIS); Glutamine amidotransferase, class-II; PRIAM: Glutamine--fructose-6-phosphate transaminase (isomerizing); SPTR: Glucosamine--fructose-6-phosphate aminotransferase; TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; glucosamine--fructose-6-phosphate aminotransferase 1181153 11053899 Murru_1078 Muricauda ruestringensis DSM 13258 glucosamine--fructose-6-phosphate aminotransferase YP_004787544.1 1179306 D 886377 CDS YP_004787545.1 344202402 11053900 1181362..1184148 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; InterPro IPR012910:IPR000531; KEGG: rbi:RB2501_07995 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; TonB-dependent receptor 1184148 11053900 Murru_1079 Muricauda ruestringensis DSM 13258 TonB-dependent receptor YP_004787545.1 1181362 D 886377 CDS YP_004787546.1 344202403 11053901 1184311..1185819 1 NC_015945.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit; COGs: COG0055 F0F1-type ATP synthase beta subunit; HAMAP: ATPase, F1 complex, beta subunit; InterProIPR004100:IPR000194:IPR000793:IPR005722:IPR 003593; KEGG: fbc:FB2170_07404 ATP synthase subunit B; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP synthase subunit beta; TIGRFAM: ATPase, F1 complex, beta subunit; ATP synthase subunit beta 1185819 11053901 Murru_1080 Muricauda ruestringensis DSM 13258 ATP synthase subunit beta YP_004787546.1 1184311 D 886377 CDS YP_004787547.1 344202404 11053902 1185847..1186125 1 NC_015945.1 PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; COGs: COG0355 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit); InterPro IPR020546; KEGG: fbc:FB2170_07409 ATP synthase F1 subunit epsilon; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; SPTR: ATP synthase F1, epsilon subunit; ATPase F1 subunit delta/epsilon subunit 1186125 11053902 Murru_1081 Muricauda ruestringensis DSM 13258 ATPase F1 subunit delta/epsilon subunit YP_004787547.1 1185847 D 886377 CDS YP_004787548.1 344202405 11053903 1186387..1187745 1 NC_015945.1 PFAM: ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA; COGs: COG1066 ATP-dependent serine protease; InterPro IPR004504:IPR003593; KEGG: fbc:FB2170_07359 putative DNA repair protein; SMART: ATPase, AAA+ type, core; SPTR: DNA repair protein radA; TIGRFAM: DNA repair protein RadA; DNA repair protein RadA 1187745 11053903 Murru_1082 Muricauda ruestringensis DSM 13258 DNA repair protein RadA YP_004787548.1 1186387 D 886377 CDS YP_004787549.1 344202406 11053904 1187963..1190119 1 NC_015945.1 PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Cytochrome c; PQQ enzyme repeat; COGs: COG4993 Glucose dehydrogenase; InterPro IPR019551:IPR002372:IPR019556:IPR018391; KEGG: lby:Lbys_1799 quinoprotein glucose dehydrogenase; PFAM: PQQ-dependent enzyme, N-terminal; Pyrrolo-quinoline quinone repeat; PQQ-dependent enzyme, C-terminal; PRIAM: Quinoprotein glucose dehydrogenase; SPTR: PQQ-dependent enzyme-like protein; quinoprotein glucose dehydrogenase 1190119 11053904 Murru_1083 Muricauda ruestringensis DSM 13258 quinoprotein glucose dehydrogenase YP_004787549.1 1187963 D 886377 CDS YP_004787550.1 344202407 11053905 complement(1190121..1191161) 1 NC_015945.1 PFAM: Aldo/keto reductase family; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR023210; KEGG: fbc:FB2170_07349 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain; SPTR: Aldo/keto reductase; NADP-dependent oxidoreductase domain-containing protein 1191161 11053905 Murru_1084 Muricauda ruestringensis DSM 13258 NADP-dependent oxidoreductase domain-containing protein YP_004787550.1 1190121 R 886377 CDS YP_004787551.1 344202408 11053906 complement(1191222..1191986) 1 NC_015945.1 PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth); COGs: COG0708 Exonuclease III; InterPro IPR005135:IPR000097:IPR004808; KEGG: fbc:FB2170_07334 exodeoxyribonuclease; PFAM: Endonuclease/exonuclease/phosphatase; PRIAM: Exodeoxyribonuclease III; SPTR: Exodeoxyribonuclease; TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; exodeoxyribonuclease III Xth 1191986 11053906 Murru_1085 Muricauda ruestringensis DSM 13258 exodeoxyribonuclease III Xth YP_004787551.1 1191222 R 886377 CDS YP_004787552.1 344202409 11053907 1192122..1192676 1 NC_015945.1 PFAM: Isochorismatase family; COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: ran:Riean_0018 isochorismatase hydrolase; PFAM: Isochorismatase-like; SPTR: Isochorismatase; isochorismatase hydrolase 1192676 11053907 Murru_1086 Muricauda ruestringensis DSM 13258 isochorismatase hydrolase YP_004787552.1 1192122 D 886377 CDS YP_004787553.1 344202410 11053908 1192711..1193814 1 NC_015945.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: rbi:RB2501_03990 NADH-dependent dyhydrogenase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Putative oxidoreductase family, NAD-binding Rossmann fold protein; oxidoreductase domain-containing protein 1193814 11053908 Murru_1087 Muricauda ruestringensis DSM 13258 oxidoreductase domain-containing protein YP_004787553.1 1192711 D 886377 CDS YP_004787554.1 344202411 11053909 1193826..1195907 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG4772 Outer membrane receptor for Fe3+-dicitrate; InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_07314 paral putative outer membrane receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Paral putative outer membrane receptor; TonB-dependent receptor 1195907 11053909 Murru_1088 Muricauda ruestringensis DSM 13258 TonB-dependent receptor YP_004787554.1 1193826 D 886377 CDS YP_004787555.1 344202412 11053910 1195918..1196400 1 NC_015945.1 PFAM: Bacterial transcription activator, effector binding domain; COGs: COG3708 conserved hypothetical protein; InterPro IPR010499; KEGG: fjo:Fjoh_2178 transcription activator, effector binding; PFAM: Bacterial transcription activator, effector binding; SMART: Bacterial transcription activator, effector binding; SPTR: Transcription activator, effector binding; transcription activator effector binding protein 1196400 11053910 Murru_1089 Muricauda ruestringensis DSM 13258 transcription activator effector binding protein YP_004787555.1 1195918 D 886377 CDS YP_004787556.1 344202413 11053911 complement(1196428..1196535) 1 NC_015945.1 hypothetical protein 1196535 11053911 Murru_1090 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787556.1 1196428 R 886377 CDS YP_004787557.1 344202414 11053912 complement(1196568..1196786) 1 NC_015945.1 hypothetical protein 1196786 11053912 Murru_1091 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787557.1 1196568 R 886377 CDS YP_004787558.1 344202415 11053913 1196956..1197468 1 NC_015945.1 PFAM: Protein of unknown function (DUF3124); KEGG: gfo:GFO_0139 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1197468 11053913 Murru_1092 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787558.1 1196956 D 886377 CDS YP_004787559.1 344202416 11053914 1197573..1199240 1 NC_015945.1 PFAM: Formate--tetrahydrofolate ligase; COGs: COG2759 Formyltetrahydrofolate synthetase; HAMAP: Formate-tetrahydrofolate ligase, FTHFS; InterPro IPR000559; KEGG: mtt:Ftrac_2297 formate-tetrahydrofolate ligase; PFAM: Formate-tetrahydrofolate ligase, FTHFS; PRIAM: Formate--tetrahydrofolate ligase; SPTR: Formate--tetrahydrofolate ligase; Formate--tetrahydrofolate ligase 1199240 11053914 Murru_1093 Muricauda ruestringensis DSM 13258 Formate--tetrahydrofolate ligase YP_004787559.1 1197573 D 886377 CDS YP_004787560.1 344202417 11053915 complement(1199244..1200785) 1 NC_015945.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type; COGs: COG0423 Glycyl-tRNA synthetase (class II); InterPro IPR002314:IPR004154:IPR002315; KEGG: fbc:FB2170_07245 glycyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Anticodon-binding; SPTR: Glycyl-tRNA synthetase; TIGRFAM: Glycyl-tRNA synthetase, alpha2 dimer; glycyl-tRNA synthetase 1200785 11053915 Murru_1094 Muricauda ruestringensis DSM 13258 glycyl-tRNA synthetase YP_004787560.1 1199244 R 886377 CDS YP_004787561.1 344202418 11053916 complement(1200822..1201718) 1 NC_015945.1 KEGG: rbi:RB2501_07920 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1201718 11053916 Murru_1095 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787561.1 1200822 R 886377 CDS YP_004787562.1 344202419 11053917 1201753..1202463 1 NC_015945.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein; COGs: COG1040 amidophosphoribosyltransferase; KEGG: fbc:FB2170_07235 putative amidophosphoribosyl-transferase; SPTR: Putative amidophosphoribosyl-transferase; putative amidophosphoribosyl-transferase 1202463 11053917 Murru_1096 Muricauda ruestringensis DSM 13258 putative amidophosphoribosyl-transferase YP_004787562.1 1201753 D 886377 CDS YP_004787563.1 344202420 11053918 1202529..1204148 1 NC_015945.1 KEGG: fbc:FB2170_07230 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1204148 11053918 Murru_1097 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787563.1 1202529 D 886377 CDS YP_004787564.1 344202421 11053919 complement(1204132..1204908) 1 NC_015945.1 PFAM: Carbon-nitrogen hydrolase; COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: fbc:FB2170_07225 putative amidohydrolase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Putative amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1204908 11053919 Murru_1098 Muricauda ruestringensis DSM 13258 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004787564.1 1204132 R 886377 CDS YP_004787565.1 344202422 11053920 complement(1204909..1205385) 1 NC_015945.1 PFAM: Ankyrin repeat; COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110; KEGG: rbi:RB2501_07900 hypothetical protein; PFAM: Ankyrin repeat; SPTR: Putative uncharacterized protein; ankyrin 1205385 11053920 Murru_1099 Muricauda ruestringensis DSM 13258 ankyrin YP_004787565.1 1204909 R 886377 CDS YP_004787566.1 344202423 11053921 complement(1205489..1207714) 1 NC_015945.1 PFAM: Peroxidase; TIGRFAM: catalase/peroxidase HPI; COGs: COG0376 Catalase (peroxidase I); HAMAP: Catalase-peroxidase haem; InterPro IPR002016:IPR000763; KEGG: avn:Avin_05880 heme catalase/peroxidase HPI; PFAM: Haem peroxidase, plant/fungal/bacterial; PRIAM: Catalase; SPTR: Catalase-peroxidase; TIGRFAM: Catalase-peroxidase haem; catalase 1207714 11053921 Murru_1100 Muricauda ruestringensis DSM 13258 catalase YP_004787566.1 1205489 R 886377 CDS YP_004787567.1 344202424 11053922 1207993..1208607 1 NC_015945.1 PFAM: Protein of unknown function (DUF664); KEGG: fbc:FB2170_07210 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1208607 11053922 Murru_1101 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787567.1 1207993 D 886377 CDS YP_004787568.1 344202425 11053923 1208654..1209235 1 NC_015945.1 KEGG: gfo:GFO_3003 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1209235 11053923 Murru_1102 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787568.1 1208654 D 886377 CDS YP_004787569.1 344202426 11053924 complement(1209290..1209787) 1 NC_015945.1 hypothetical protein 1209787 11053924 Murru_1103 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787569.1 1209290 R 886377 CDS YP_004787570.1 344202427 11053925 complement(1209867..1210346) 1 NC_015945.1 hypothetical protein 1210346 11053925 Murru_1104 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787570.1 1209867 R 886377 CDS YP_004787571.1 344202428 11053926 complement(1210300..1211703) 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 1211703 11053926 Murru_1105 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787571.1 1210300 R 886377 CDS YP_004787572.1 344202429 11053927 complement(1211723..1212037) 1 NC_015945.1 hypothetical protein 1212037 11053927 Murru_1106 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787572.1 1211723 R 886377 CDS YP_004787573.1 344202430 11053928 complement(1212194..1213558) 1 NC_015945.1 KEGG: rbi:RB2501_07895 extracellular nuclease; SPTR: Extracellular nuclease; extracellular nuclease 1213558 11053928 Murru_1107 Muricauda ruestringensis DSM 13258 extracellular nuclease YP_004787573.1 1212194 R 886377 CDS YP_004787574.1 344202431 11053929 complement(1213570..1216305) 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; KEGG: coc:Coch_0578 TonB-dependent receptor; SPTR: TonB-dependent receptor; TonB-dependent receptor 1216305 11053929 Murru_1108 Muricauda ruestringensis DSM 13258 TonB-dependent receptor YP_004787574.1 1213570 R 886377 CDS YP_004787575.1 344202432 11053930 1216407..1217444 1 NC_015945.1 PFAM: Endonuclease/Exonuclease/phosphatase family; InterPro IPR005135; KEGG: fbc:FB2170_07175 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Putative uncharacterized protein; endonuclease/exonuclease/phosphatase 1217444 11053930 Murru_1109 Muricauda ruestringensis DSM 13258 endonuclease/exonuclease/phosphatase YP_004787575.1 1216407 D 886377 CDS YP_004787576.1 344202433 11053931 complement(1217472..1217909) 1 NC_015945.1 KEGG: fbc:FB2170_07165 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1217909 11053931 Murru_1110 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787576.1 1217472 R 886377 CDS YP_004787577.1 344202434 11053932 complement(1218008..1220656) 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531:IPR017690; KEGG: rbi:RB2501_07870 putative TonB-dependent outer membrane receptor protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Putative TonB-dependent outer membrane receptor protein; TIGRFAM: Outer membrane insertion C-terminal signal, omp85; outer membrane insertion C-terminal signal protein 1220656 11053932 Murru_1111 Muricauda ruestringensis DSM 13258 outer membrane insertion C-terminal signal protein YP_004787577.1 1218008 R 886377 CDS YP_004787578.1 344202435 11053933 complement(1220829..1222466) 1 NC_015945.1 PFAM: Phosphoglucose isomerase; COGs: COG0166 Glucose-6-phosphate isomerase; HAMAP: Phosphoglucose isomerase (PGI); InterPro IPR001672; KEGG: fbc:FB2170_07155 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI); PRIAM: Glucose-6-phosphate isomerase; SPTR: Glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 1222466 11053933 Murru_1112 Muricauda ruestringensis DSM 13258 glucose-6-phosphate isomerase YP_004787578.1 1220829 R 886377 CDS YP_004787579.1 344202436 11053934 complement(1222466..1223749) 1 NC_015945.1 PFAM: Peptidase family M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: fbc:FB2170_07150 peptidase, M23/M37 family protein; PFAM: Peptidase M23; SPTR: Peptidase, M23/M37 family protein; peptidase M23 1223749 11053934 Murru_1113 Muricauda ruestringensis DSM 13258 peptidase M23 YP_004787579.1 1222466 R 886377 CDS YP_004787580.1 344202437 11053935 complement(1223758..1224732) 1 NC_015945.1 PFAM: Tryptophan 2,3-dioxygenase; COGs: COG3483 Tryptophan 2 3-dioxygenase (vermilion); InterPro IPR004981; KEGG: rbi:RB2501_07855 tryptophan 2,3-dioxygenase; PFAM: Tryptophan 2,3-dioxygenase; SPTR: Tryptophan 2,3-dioxygenase; tryptophan 23-dioxygenase 1224732 11053935 Murru_1114 Muricauda ruestringensis DSM 13258 tryptophan 23-dioxygenase YP_004787580.1 1223758 R 886377 CDS YP_004787581.1 344202438 11053936 complement(1224744..1225526) 1 NC_015945.1 PFAM: Protein of unknown function (DUF3108); KEGG: fbc:FB2170_07145 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1225526 11053936 Murru_1115 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787581.1 1224744 R 886377 CDS YP_004787582.1 344202439 11053937 complement(1225863..1228130) 1 NC_015945.1 PFAM: Patatin-like phospholipase; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641:IPR010827; KEGG: rbi:RB2501_07835 putative patatin-like phospholipase; PFAM: Patatin/Phospholipase A2-related; Surface antigen variable number; SPTR: Putative patatin-like phospholipase; patatin 1228130 11053937 Murru_1116 Muricauda ruestringensis DSM 13258 patatin YP_004787582.1 1225863 R 886377 CDS YP_004787583.1 344202440 11053938 complement(1228134..1229927) 1 NC_015945.1 PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit; COGs: COG0322 Nuclease subunit of the excinuclease complex; HAMAP: Excinuclease ABC, C subunit; InterPro IPR000305:IPR001943:IPR001162:IPR004791; KEGG: fbc:FB2170_07130 excinuclease ABC subunit C; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; SMART: Excinuclease ABC, C subunit, N-terminal; SPTR: UvrABC system protein C; TIGRFAM: Excinuclease ABC, C subunit; UvrABC system protein C 1229927 11053938 Murru_1117 Muricauda ruestringensis DSM 13258 UvrABC system protein C YP_004787583.1 1228134 R 886377 CDS YP_004787584.1 344202441 11053939 1230268..1230360 1 NC_015945.1 hypothetical protein 1230360 11053939 Murru_1118 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787584.1 1230268 D 886377 CDS YP_004787585.1 344202442 11053940 1230404..1230967 1 NC_015945.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase; COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: zpr:ZPR_0180 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 1230967 11053940 Murru_1119 Muricauda ruestringensis DSM 13258 5-formyltetrahydrofolate cyclo-ligase YP_004787585.1 1230404 D 886377 CDS YP_004787586.1 344202443 11053941 complement(1230955..1231605) 1 NC_015945.1 PFAM: Signal peptidase (SPase) II; COGs: COG0597 Lipoprotein signal peptidase; HAMAP: Peptidase A8, signal peptidase II; InterPro IPR001872; KEGG: fbc:FB2170_07120 putative signal peptidase; PFAM: Peptidase A8, signal peptidase II; SPTR: Lipoprotein signal peptidase 1; lipoprotein signal peptidase 1231605 11053941 Murru_1120 Muricauda ruestringensis DSM 13258 lipoprotein signal peptidase YP_004787586.1 1230955 R 886377 CDS YP_004787587.1 344202444 11053942 complement(1231639..1232259) 1 NC_015945.1 KEGG: fbc:FB2170_07115 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1232259 11053942 Murru_1121 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787587.1 1231639 R 886377 CDS YP_004787588.1 344202445 11053943 complement(1232288..1232671) 1 NC_015945.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; KEGG: rbi:RB2501_07805 putative regulatory protein; SPTR: Putative regulatory protein; putative regulatory protein 1232671 11053943 Murru_1122 Muricauda ruestringensis DSM 13258 putative regulatory protein YP_004787588.1 1232288 R 886377 CDS YP_004787589.1 344202446 11053944 complement(1232675..1236076) 1 NC_015945.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: isoleucyl-tRNA synthetase; COGs: COG0060 Isoleucyl-tRNA synthetase; HAMAP: Isoleucyl-tRNA synthetase, class Ia; InterPro IPR002300:IPR013155:IPR002301; KEGG: fbc:FB2170_07105 isoleucyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; PRIAM: Isoleucine--tRNA ligase; SPTR: Isoleucyl-tRNA synthetase; TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; isoleucyl-tRNA synthetase 1236076 11053944 Murru_1123 Muricauda ruestringensis DSM 13258 isoleucyl-tRNA synthetase YP_004787589.1 1232675 R 886377 CDS YP_004787590.1 344202447 11053945 1236257..1236550 1 NC_015945.1 InterPro IPR012556; KEGG: rbi:RB2501_07795 hypothetical protein; PFAM: Entericidin EcnAB; SPTR: Putative uncharacterized protein; entericidin EcnAB 1236550 11053945 Murru_1124 Muricauda ruestringensis DSM 13258 entericidin EcnAB YP_004787590.1 1236257 D 886377 CDS YP_004787591.1 344202448 11053946 complement(1236728..1239148) 1 NC_015945.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_07095 hypothetical protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Putative uncharacterized protein; TonB-dependent receptor 1239148 11053946 Murru_1125 Muricauda ruestringensis DSM 13258 TonB-dependent receptor YP_004787591.1 1236728 R 886377 CDS YP_004787592.1 344202449 11053947 complement(1239151..1239870) 1 NC_015945.1 PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO; COGs: COG1381 Recombinational DNA repair protein (RecF pathway); HAMAP: Recombination protein O, RecO; InterPro IPR003717; KEGG: fbc:FB2170_07090 DNA repair protein; PFAM: Recombination protein O, RecO; SPTR: DNA repair protein recO; TIGRFAM: Recombination protein O, RecO; DNA repair protein recO 1239870 11053947 Murru_1126 Muricauda ruestringensis DSM 13258 DNA repair protein recO YP_004787592.1 1239151 R 886377 CDS YP_004787593.1 344202450 11053948 complement(1239956..1241296) 1 NC_015945.1 PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097:IPR006096; KEGG: rbi:RB2501_07780 glutamate dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; PRIAM: Glutamate dehydrogenase (NADP(+)); SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; SPTR: Glutamate dehydrogenase; manually curated; glutamate dehydrogenase (NADP(+)) 1241296 11053948 Murru_1127 Muricauda ruestringensis DSM 13258 glutamate dehydrogenase (NADP(+)) YP_004787593.1 1239956 R 886377 CDS YP_004787594.1 344202451 11053949 complement(1241425..1242600) 1 NC_015945.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: fbc:FB2170_07025 Cys/Met metabolism PLP-dependent enzyme superfamily protein; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cystathionine gamma-lyase; SPTR: Cys/Met metabolism PLP-dependent enzyme superfamily protein; cystathionine gamma-synthase 1242600 11053949 Murru_1128 Muricauda ruestringensis DSM 13258 cystathionine gamma-synthase YP_004787594.1 1241425 R 886377 CDS YP_004787595.1 344202452 11053950 1242666..1243406 1 NC_015945.1 PFAM: Protein of unknown function (DUF3298); KEGG: fbc:FB2170_07020 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1243406 11053950 Murru_1129 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787595.1 1242666 D 886377 CDS YP_004787596.1 344202453 11053951 complement(1243403..1243870) 1 NC_015945.1 KEGG: fbc:FB2170_07015 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1243870 11053951 Murru_1130 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787596.1 1243403 R 886377 CDS YP_004787597.1 344202454 11053952 1244045..1244398 1 NC_015945.1 PFAM: ArsC family; COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006660; KEGG: fbc:FB2170_06980 hypothetical protein; PFAM: Arsenate reductase-like; SPTR: Putative uncharacterized protein; arsenate reductase 1244398 11053952 Murru_1131 Muricauda ruestringensis DSM 13258 arsenate reductase YP_004787597.1 1244045 D 886377 CDS YP_004787598.1 344202455 11053953 1244395..1245288 1 NC_015945.1 PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: rbi:RB2501_07760 hypothetical protein; PFAM: Drug/metabolite transporter; SPTR: Putative uncharacterized protein; hypothetical protein 1245288 11053953 Murru_1132 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787598.1 1244395 D 886377 CDS YP_004787599.1 344202456 11053954 1245713..1246288 1 NC_015945.1 PFAM: Thioredoxin; KEGG: zpr:ZPR_0960 thioredoxin-like protein; SPTR: Thioredoxin-like protein; hypothetical protein 1246288 11053954 Murru_1133 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787599.1 1245713 D 886377 CDS YP_004787600.1 344202457 11053955 1246318..1246518 1 NC_015945.1 hypothetical protein 1246518 11053955 Murru_1134 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787600.1 1246318 D 886377 CDS YP_004787601.1 344202458 11053956 1246602..1247300 1 NC_015945.1 PFAM: Protein of unknown function (Porph_ging); InterPro IPR019115; KEGG: fps:FP0331 hypothetical protein; PFAM: Uncharacterised protein family, bacteroidetes; SPTR: Putative uncharacterized protein; hypothetical protein 1247300 11053956 Murru_1135 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787601.1 1246602 D 886377 CDS YP_004787602.1 344202459 11053957 1247297..1249969 1 NC_015945.1 KEGG: zpr:ZPR_0173 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1249969 11053957 Murru_1136 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787602.1 1247297 D 886377 CDS YP_004787603.1 344202460 11053958 complement(1250111..1250593) 1 NC_015945.1 PFAM: Acyl-ACP thioesterase; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; COGs: COG0824 thioesterase; KEGG: fbc:FB2170_06965 hypothetical protein; SPTR: Thioesterase-like protein; hypothetical protein 1250593 11053958 Murru_1137 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787603.1 1250111 R 886377 CDS YP_004787604.1 344202461 11053959 1250711..1251688 1 NC_015945.1 PFAM: 2-nitropropane dioxygenase; COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136; KEGG: fbc:FB2170_06960 2-nitropropane dioxygenase family protein; PFAM: 2-nitropropane dioxygenase, NPD; SPTR: 2-nitropropane dioxygenase family protein; 2-nitropropane dioxygenase 1251688 11053959 Murru_1138 Muricauda ruestringensis DSM 13258 2-nitropropane dioxygenase YP_004787604.1 1250711 D 886377 CDS YP_004787605.1 344202462 11053960 1251711..1252670 1 NC_015945.1 PFAM: alpha/beta hydrolase fold; COGs: COG0429 hydrolase of the alpha/beta-hydrolase fold; InterPro IPR000073; KEGG: fbc:FB2170_06950 hypothetical protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Putative uncharacterized protein; alpha/beta hydrolase fold protein 1252670 11053960 Murru_1139 Muricauda ruestringensis DSM 13258 alpha/beta hydrolase fold protein YP_004787605.1 1251711 D 886377 CDS YP_004787606.1 344202463 11053961 1252803..1253267 1 NC_015945.1 PFAM: Cytochrome c; InterPro IPR003088; KEGG: fbc:FB2170_06945 mulitcopper oxidase domain-containing protein; PFAM: Cytochrome c, class I; SPTR: Mulitcopper oxidase domain protein; cytochrome c class I 1253267 11053961 Murru_1140 Muricauda ruestringensis DSM 13258 cytochrome c class I YP_004787606.1 1252803 D 886377 CDS YP_004787607.1 344202464 11053962 1253350..1254057 1 NC_015945.1 KEGG: mtt:Ftrac_2749 membrane or secreted protein; SPTR: Putative uncharacterized protein; membrane or secreted protein 1254057 11053962 Murru_1141 Muricauda ruestringensis DSM 13258 membrane or secreted protein YP_004787607.1 1253350 D 886377 CDS YP_004787608.1 344202465 11053963 1254123..1254674 1 NC_015945.1 PFAM: RibD C-terminal domain; COGs: COG0262 Dihydrofolate reductase; InterPro IPR002734; KEGG: phe:Phep_0878 bifunctional deaminase-reductase domain protein; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; SPTR: Bifunctional deaminase-reductase domain protein; bifunctional deaminase-reductase domain-containing protein 1254674 11053963 Murru_1142 Muricauda ruestringensis DSM 13258 bifunctional deaminase-reductase domain-containing protein YP_004787608.1 1254123 D 886377 CDS YP_004787609.1 344202466 11053964 1254857..1255276 1 NC_015945.1 PFAM: META domain; InterPro IPR005184; KEGG: fjo:Fjoh_0275 protein of unknown function DUF306, MetA and HslJ; PFAM: Domain of unknown function DUF306, Meta/HslJ; SPTR: Putative uncharacterized protein; hypothetical protein 1255276 11053964 Murru_1143 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787609.1 1254857 D 886377 CDS YP_004787610.1 344202467 11053965 1255273..1256097 1 NC_015945.1 PFAM: META domain; COGs: COG3187 Heat shock protein; InterPro IPR005184; KEGG: fjo:Fjoh_4623 protein of unknown function DUF306, MetA and HslJ; PFAM: Domain of unknown function DUF306, Meta/HslJ; SPTR: Putative uncharacterized protein; hypothetical protein 1256097 11053965 Murru_1144 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787610.1 1255273 D 886377 CDS YP_004787611.1 344202468 11053966 1256100..1256696 1 NC_015945.1 PFAM: DinB family; KEGG: fbc:FB2170_02190 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1256696 11053966 Murru_1145 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787611.1 1256100 D 886377 CDS YP_004787612.1 344202469 11053967 complement(1256808..1257767) 1 NC_015945.1 KEGG: fbc:FB2170_06895 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1257767 11053967 Murru_1146 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787612.1 1256808 R 886377 CDS YP_004787613.1 344202470 11053968 1257853..1258854 1 NC_015945.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; COGs: COG0240 Glycerol-3-phosphate dehydrogenase; InterPro IPR011128:IPR006109; KEGG: cat:CA2559_02220 glycerol-3-phosphate dehydrogenase; PFAM: Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal; Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal; PRIAM: Glycerol-3-phosphate dehydrogenase (NAD(P)(+)); SPTR: Glycerol-3-phosphate dehydrogenase; glycerol-3-phosphate dehydrogenase 1258854 11053968 Murru_1147 Muricauda ruestringensis DSM 13258 glycerol-3-phosphate dehydrogenase YP_004787613.1 1257853 D 886377 CDS YP_004787614.1 344202471 11053969 complement(1258863..1259501) 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 1259501 11053969 Murru_1148 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787614.1 1258863 R 886377 CDS YP_004787615.1 344202472 11053970 complement(1259531..1262212) 1 NC_015945.1 KEGG: zpr:ZPR_0173 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1262212 11053970 Murru_1149 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787615.1 1259531 R 886377 CDS YP_004787616.1 344202473 11053971 complement(1262254..1263015) 1 NC_015945.1 PFAM: Protein of unknown function (Porph_ging); InterPro IPR019115; KEGG: zpr:ZPR_0166 hypothetical protein; PFAM: Uncharacterised protein family, bacteroidetes; SPTR: Putative uncharacterized protein; hypothetical protein 1263015 11053971 Murru_1150 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787616.1 1262254 R 886377 CDS YP_004787617.1 344202474 11053972 complement(1263142..1263342) 1 NC_015945.1 hypothetical protein 1263342 11053972 Murru_1151 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787617.1 1263142 R 886377 CDS YP_004787618.1 344202475 11053973 1263438..1263545 1 NC_015945.1 hypothetical protein 1263545 11053973 Murru_1152 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787618.1 1263438 D 886377 CDS YP_004787619.1 344202476 11053974 complement(1263664..1264368) 1 NC_015945.1 PFAM: Protein of unknown function (Porph_ging); InterPro IPR019115; KEGG: zpr:ZPR_0171 hypothetical protein; PFAM: Uncharacterised protein family, bacteroidetes; SPTR: Putative uncharacterized protein; hypothetical protein 1264368 11053974 Murru_1153 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787619.1 1263664 R 886377 CDS YP_004787620.1 344202477 11053975 complement(1264383..1265021) 1 NC_015945.1 PFAM: Protein of unknown function (Porph_ging); InterPro IPR019115; KEGG: fps:FP0266 hypothetical protein; PFAM: Uncharacterised protein family, bacteroidetes; SPTR: Putative uncharacterized protein; hypothetical protein 1265021 11053975 Murru_1154 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787620.1 1264383 R 886377 CDS YP_004787621.1 344202478 11053976 complement(1265071..1265163) 1 NC_015945.1 hypothetical protein 1265163 11053976 Murru_1155 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787621.1 1265071 R 886377 CDS YP_004787622.1 344202479 11053977 complement(1265187..1265399) 1 NC_015945.1 hypothetical protein 1265399 11053977 Murru_1156 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787622.1 1265187 R 886377 CDS YP_004787623.1 344202480 11053978 1265497..1265607 1 NC_015945.1 hypothetical protein 1265607 11053978 Murru_1157 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787623.1 1265497 D 886377 CDS YP_004787624.1 344202481 11053979 complement(1265629..1266348) 1 NC_015945.1 PFAM: Protein of unknown function (Porph_ging); InterPro IPR019115; KEGG: zpr:ZPR_0171 hypothetical protein; PFAM: Uncharacterised protein family, bacteroidetes; SPTR: Putative uncharacterized protein; hypothetical protein 1266348 11053979 Murru_1158 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787624.1 1265629 R 886377 CDS YP_004787625.1 344202482 11053980 complement(1266408..1266608) 1 NC_015945.1 hypothetical protein 1266608 11053980 Murru_1159 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787625.1 1266408 R 886377 CDS YP_004787626.1 344202483 11053981 complement(1266891..1268558) 1 NC_015945.1 PFAM: FAD dependent oxidoreductase; COGs: COG0578 Glycerol-3-phosphate dehydrogenase; InterPro IPR006076; KEGG: fbc:FB2170_06880 GlpD; PFAM: FAD dependent oxidoreductase; PRIAM: Glycerol-3-phosphate dehydrogenase; SPTR: GlpD; glycerol-3-phosphate dehydrogenase 1268558 11053981 Murru_1160 Muricauda ruestringensis DSM 13258 glycerol-3-phosphate dehydrogenase YP_004787626.1 1266891 R 886377 CDS YP_004787627.1 344202484 11053982 complement(1268562..1268870) 1 NC_015945.1 PFAM: Antibiotic biosynthesis monooxygenase; COGs: COG2329 Uncharacterized protein involved in biosynthesis of extracellular polysaccharides; InterPro IPR007138; KEGG: fbc:FB2170_06865 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Putative uncharacterized protein; antibiotic biosynthesis monooxygenase 1268870 11053982 Murru_1161 Muricauda ruestringensis DSM 13258 antibiotic biosynthesis monooxygenase YP_004787627.1 1268562 R 886377 CDS YP_004787628.1 344202485 11053983 complement(1268871..1269227) 1 NC_015945.1 KEGG: fbc:FB2170_06860 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1269227 11053983 Murru_1162 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787628.1 1268871 R 886377 CDS YP_004787629.1 344202486 11053984 1269288..1269818 1 NC_015945.1 PFAM: Colicin V production protein; InterPro IPR003825; KEGG: fbc:FB2170_06855 hypothetical protein; PFAM: Colicin V production, CvpA; SPTR: Putative uncharacterized protein; colicin V production protein 1269818 11053984 Murru_1163 Muricauda ruestringensis DSM 13258 colicin V production protein YP_004787629.1 1269288 D 886377 CDS YP_004787630.1 344202487 11053985 1270007..1270519 1 NC_015945.1 PFAM: Cysteine-rich secretory protein family; COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044; KEGG: fbc:FB2170_06830 allergen V5/TPX-1 related protein; PFAM: CAP domain; SPTR: Allergen V5/Tpx-1 related protein; hypothetical protein 1270519 11053985 Murru_1164 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787630.1 1270007 D 886377 CDS YP_004787631.1 344202488 11053986 1270625..1271167 1 NC_015945.1 PFAM: 3-hydroxyanthranilic acid dioxygenase; TIGRFAM: 3-hydroxyanthranilate 3,4-dioxygenase; InterPro IPR010329; KEGG: fbc:FB2170_06825 3-hydroxyanthranilate 3,4-dioxygenase; PFAM: 3-hydroxyanthranilic acid dioxygenase; PRIAM: 3-hydroxyanthranilate 3,4-dioxygenase; SPTR: 3-hydroxyanthranilate 3,4-dioxygenase; TIGRFAM: 3-hydroxyanthranilic acid dioxygenase; 3-hydroxyanthranilate 3,4-dioxygenase 1271167 11053986 Murru_1165 Muricauda ruestringensis DSM 13258 3-hydroxyanthranilate 3,4-dioxygenase YP_004787631.1 1270625 D 886377 CDS YP_004787632.1 344202489 11053987 1271164..1271538 1 NC_015945.1 PFAM: Protein of unknown function (DUF1304); COGs: COG3759 membrane protein; InterPro IPR009732; KEGG: fbc:FB2170_06820 hypothetical protein; PFAM: Protein of unknown function DUF1304; SPTR: Putative uncharacterized protein; hypothetical protein 1271538 11053987 Murru_1166 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787632.1 1271164 D 886377 CDS YP_004787633.1 344202490 11053988 1271609..1273162 1 NC_015945.1 PFAM: Aldehyde dehydrogenase family; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: zpr:ZPR_0298 aldehyde dehydrogenase family protein; PFAM: Aldehyde dehydrogenase domain; PRIAM: L-aminoadipate-semialdehyde dehydrogenase; SPTR: Aldehyde dehydrogenase family protein; L-aminoadipate-semialdehyde dehydrogenase 1273162 11053988 Murru_1167 Muricauda ruestringensis DSM 13258 L-aminoadipate-semialdehyde dehydrogenase YP_004787633.1 1271609 D 886377 CDS YP_004787634.1 344202491 11053989 1273256..1273372 1 NC_015945.1 hypothetical protein 1273372 11053989 Murru_1168 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787634.1 1273256 D 886377 CDS YP_004787635.1 344202492 11053990 1273547..1274083 1 NC_015945.1 KEGG: rbi:RB2501_07680 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1274083 11053990 Murru_1169 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787635.1 1273547 D 886377 CDS YP_004787636.1 344202493 11053991 complement(1274111..1275106) 1 NC_015945.1 PFAM: Fatty acid desaturase; InterPro IPR005067; KEGG: fbc:FB2170_06790 putative acyl-[acyl-carrier protein] desaturase; PFAM: Fatty acid desaturase, type 2; PRIAM: Acyl-[acyl-carrier-protein] desaturase; SPTR: Putative acyl-[acyl-carrier protein] desaturase; acyl-(acyl-carrier-protein) desaturase 1275106 11053991 Murru_1170 Muricauda ruestringensis DSM 13258 acyl-(acyl-carrier-protein) desaturase YP_004787636.1 1274111 R 886377 CDS YP_004787637.1 344202494 11053992 complement(1275152..1275877) 1 NC_015945.1 PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: fbc:FB2170_06785 serine/threonine protein phosphatase; PFAM: Metallo-dependent phosphatase; SPTR: Serine/threonine protein phosphatase; metallophosphoesterase 1275877 11053992 Murru_1171 Muricauda ruestringensis DSM 13258 metallophosphoesterase YP_004787637.1 1275152 R 886377 CDS YP_004787638.1 344202495 11053993 1276030..1276974 1 NC_015945.1 PFAM: pfkB family carbohydrate kinase; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: fbc:FB2170_06765 fructokinase; PFAM: Carbohydrate/purine kinase; PRIAM: Fructokinase; SPTR: Fructokinase; fructokinase 1276974 11053993 Murru_1172 Muricauda ruestringensis DSM 13258 fructokinase YP_004787638.1 1276030 D 886377 CDS YP_004787639.1 344202496 11053994 complement(1276988..1278124) 1 NC_015945.1 PFAM: Divergent AAA domain; InterPro IPR007421; KEGG: fbc:FB2170_06735 hypothetical protein; PFAM: ATPase, AAA-4; SPTR: Putative uncharacterized protein; AAA ATPase 1278124 11053994 Murru_1173 Muricauda ruestringensis DSM 13258 AAA ATPase YP_004787639.1 1276988 R 886377 CDS YP_004787640.1 344202497 11053995 complement(1278121..1278876) 1 NC_015945.1 PFAM: short chain dehydrogenase; COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: fbc:FB2170_06730 short chain dehydrogenase/reductase family oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: Serine 3-dehydrogenase; SPTR: Oxidoreductase, short chain dehydrogenase/reductase family protein; serine 3-dehydrogenase 1278876 11053995 Murru_1174 Muricauda ruestringensis DSM 13258 serine 3-dehydrogenase YP_004787640.1 1278121 R 886377 CDS YP_004787641.1 344202498 11053996 complement(1278887..1279759) 1 NC_015945.1 PFAM: Aldo/keto reductase family; COGs: COG4989 oxidoreductase; InterPro IPR023210; KEGG: fbc:FB2170_06725 hypothetical protein; PFAM: NADP-dependent oxidoreductase domain; SPTR: Putative uncharacterized protein; NADP-dependent oxidoreductase domain-containing protein 1279759 11053996 Murru_1175 Muricauda ruestringensis DSM 13258 NADP-dependent oxidoreductase domain-containing protein YP_004787641.1 1278887 R 886377 CDS YP_004787642.1 344202499 11053997 1279919..1280920 1 NC_015945.1 PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0714 MoxR-like ATPase; InterPro IPR011703; KEGG: fbc:FB2170_06720 putative magnesium chelatase; PFAM: ATPase, AAA-3; SPTR: Putative magnesium chelatase; ATPase 1280920 11053997 Murru_1176 Muricauda ruestringensis DSM 13258 ATPase YP_004787642.1 1279919 D 886377 CDS YP_004787643.1 344202500 11053998 1280990..1281856 1 NC_015945.1 PFAM: Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881:IPR002035; KEGG: fbc:FB2170_06715 hypothetical protein; PFAM: Domain of unknown function DUF58; von Willebrand factor, type A; SPTR: Putative uncharacterized protein; hypothetical protein 1281856 11053998 Murru_1177 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787643.1 1280990 D 886377 CDS YP_004787644.1 344202501 11053999 1281856..1283517 1 NC_015945.1 KEGG: fbc:FB2170_06710 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1283517 11053999 Murru_1178 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787644.1 1281856 D 886377 CDS YP_004787645.1 344202502 11054000 1283518..1284516 1 NC_015945.1 PFAM: von Willebrand factor type A domain; InterPro IPR002035; KEGG: fbc:FB2170_06705 BatA protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: BatA protein; von Willebrand factor type A 1284516 11054000 Murru_1179 Muricauda ruestringensis DSM 13258 von Willebrand factor type A YP_004787645.1 1283518 D 886377 CDS YP_004787646.1 344202503 11054001 1284520..1285566 1 NC_015945.1 PFAM: von Willebrand factor type A domain; InterPro IPR002035; KEGG: fbc:FB2170_06700 aerotolerance-related membrane protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: Aerotolerance-related membrane protein; von Willebrand factor type A 1285566 11054001 Murru_1180 Muricauda ruestringensis DSM 13258 von Willebrand factor type A YP_004787646.1 1284520 D 886377 CDS YP_004787647.1 344202504 11054002 1285559..1286452 1 NC_015945.1 PFAM: Tetratricopeptide repeat; InterPro IPR001440:IPR019734; KEGG: fbc:FB2170_06695 aerotolerance-related exported protein; PFAM: Tetratricopeptide TPR-1; SPTR: Aerotolerance-related exported protein; hypothetical protein 1286452 11054002 Murru_1181 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787647.1 1285559 D 886377 CDS YP_004787648.1 344202505 11054003 1286452..1288245 1 NC_015945.1 KEGG: fbc:FB2170_06690 aerotolerance-related exported protein; SPTR: Aerotolerance-related exported protein; aerotolerance-related exported protein 1288245 11054003 Murru_1182 Muricauda ruestringensis DSM 13258 aerotolerance-related exported protein YP_004787648.1 1286452 D 886377 CDS YP_004787649.1 344202506 11054004 1288242..1289006 1 NC_015945.1 PFAM: Tetratricopeptide repeat; Bacterial SH3 domain; InterPro IPR001440:IPR013247:IPR019734:IPR003646; KEGG: fbc:FB2170_06685 TRP domain-containing protein BatE; PFAM: Tetratricopeptide TPR-1; SH3, type 3; SMART: SH3-like domain, bacterial; Tetratricopeptide repeat; SPTR: BatE, TRP domain containing protein; hypothetical protein 1289006 11054004 Murru_1183 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787649.1 1288242 D 886377 CDS YP_004787650.1 344202507 11054005 1289064..1289372 1 NC_015945.1 hypothetical protein 1289372 11054005 Murru_1184 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787650.1 1289064 D 886377 CDS YP_004787651.1 344202508 11054006 1289459..1291042 1 NC_015945.1 PFAM: Sulfate transporter family; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547; KEGG: rbi:RB2501_07590 sulfate transporter; PFAM: Sulphate transporter; SPTR: Sulfate transporter; sulfate transporter 1291042 11054006 Murru_1185 Muricauda ruestringensis DSM 13258 sulfate transporter YP_004787651.1 1289459 D 886377 CDS YP_004787652.1 344202509 11054007 1291054..1291680 1 NC_015945.1 PFAM: Carbonic anhydrase; COGs: COG0288 Carbonic anhydrase; InterPro IPR001765; KEGG: rbi:RB2501_07585 carbonic anhydrase; PFAM: Carbonic anhydrase; SMART: Carbonic anhydrase; SPTR: Prokaryotic-type carbonic anhydrase; carbonic anhydrase 1291680 11054007 Murru_1186 Muricauda ruestringensis DSM 13258 carbonic anhydrase YP_004787652.1 1291054 D 886377 CDS YP_004787653.1 344202510 11054008 1291783..1293636 1 NC_015945.1 PFAM: Sulfate transporter family; STAS domain; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547:IPR002645; KEGG: rbi:RB2501_07580 putative sulfate permease; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Probable sulfate permease; sulfate transporter 1293636 11054008 Murru_1187 Muricauda ruestringensis DSM 13258 sulfate transporter YP_004787653.1 1291783 D 886377 CDS YP_004787654.1 344202511 11054009 1293649..1294341 1 NC_015945.1 PFAM: Alkaline phytoceramidase (aPHC); KEGG: gfo:GFO_3423 membrane protein; SPTR: Membrane protein; membrane protein 1294341 11054009 Murru_1188 Muricauda ruestringensis DSM 13258 membrane protein YP_004787654.1 1293649 D 886377 CDS YP_004787655.1 344202512 11054010 1294334..1295353 1 NC_015945.1 PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain 1, bacterial; InterPro IPR004188:IPR002319:IPR004529:IPR022911; KEGG: fbc:FB2170_06665 phenylalanyl-tRNA synthetase subunit alpha; PFAM: Phenylalanyl-tRNA synthetase; Phenylalanyl-tRNA synthetase, class II, N-terminal; SPTR: Phenylalanyl-tRNA synthetase alpha chain; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 1295353 11054010 Murru_1189 Muricauda ruestringensis DSM 13258 phenylalanyl-tRNA synthetase subunit alpha YP_004787655.1 1294334 D 886377 CDS YP_004787656.1 344202513 11054011 1295362..1295760 1 NC_015945.1 KEGG: fbc:FB2170_06660 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1295760 11054011 Murru_1190 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787656.1 1295362 D 886377 CDS YP_004787657.1 344202514 11054012 1295864..1296343 1 NC_015945.1 KEGG: zpr:ZPR_0294 transcriptional regulator; SPTR: Transcriptional regulator; transcriptional regulator 1296343 11054012 Murru_1191 Muricauda ruestringensis DSM 13258 transcriptional regulator YP_004787657.1 1295864 D 886377 CDS YP_004787658.1 344202515 11054013 1296336..1297472 1 NC_015945.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: gfo:GFO_3397 HlyD family secretion protein; PFAM: Secretion protein HlyD; SPTR: HlyD family secretion protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 1297472 11054013 Murru_1192 Muricauda ruestringensis DSM 13258 RND family efflux transporter MFP subunit YP_004787658.1 1296336 D 886377 CDS YP_004787659.1 344202516 11054014 1297505..1300648 1 NC_015945.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036:IPR004764; KEGG: gfo:GFO_3396 AcrB/AcrD/AcrF family membrane transporter; PFAM: Acriflavin resistance protein; SPTR: AcrB/AcrD/AcrF family membrane transport protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 1300648 11054014 Murru_1193 Muricauda ruestringensis DSM 13258 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_004787659.1 1297505 D 886377 CDS YP_004787660.1 344202517 11054015 1300668..1302068 1 NC_015945.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR003423:IPR010131; KEGG: zpr:ZPR_0291 OprM-like outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Putative outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein 1302068 11054015 Murru_1194 Muricauda ruestringensis DSM 13258 NodT family RND efflux system outer membrane lipoprotein YP_004787660.1 1300668 D 886377 CDS YP_004787661.1 344202518 11054016 1302085..1302687 1 NC_015945.1 PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: cat:CA2559_10053 putative TetR transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Putative TetR transcriptional regulator; regulatory protein TetR 1302687 11054016 Murru_1195 Muricauda ruestringensis DSM 13258 regulatory protein TetR YP_004787661.1 1302085 D 886377 CDS YP_004787662.1 344202519 11054017 1302862..1304157 1 NC_015945.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidase, hydantoinase/carbamoylase family; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650:IPR010158; KEGG: rbi:RB2501_12582 N-carbamoyl-L-amino acid amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; PRIAM: N-carbamoyl-L-amino-acid hydrolase; SPTR: N-carbamoyl-L-amino acid amidohydrolase; TIGRFAM: Amidase, hydantoinase/carbamoylase; amidase 1304157 11054017 Murru_1196 Muricauda ruestringensis DSM 13258 amidase YP_004787662.1 1302862 D 886377 CDS YP_004787663.1 344202520 11054018 complement(1304196..1304486) 1 NC_015945.1 PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: gfo:GFO_0945 HTH_3 family transcriptional regulator protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: HTH_3 family transcriptional regulator protein; helix-turn-helix domain-containing protein 1304486 11054018 Murru_1197 Muricauda ruestringensis DSM 13258 helix-turn-helix domain-containing protein YP_004787663.1 1304196 R 886377 CDS YP_004787664.1 344202521 11054020 complement(1304879..1305577) 1 NC_015945.1 PFAM: YhhN-like protein; COGs: COG3714 membrane protein; InterPro IPR012506; KEGG: ppr:PBPRA0147 hypothetical protein; PFAM: YhhN-like; SPTR: YhhN-like protein; hypothetical protein 1305577 11054020 Murru_1199 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787664.1 1304879 R 886377 CDS YP_004787665.1 344202522 11054021 complement(1305571..1306044) 1 NC_015945.1 PFAM: CYTH domain; COGs: COG2954 conserved hypothetical protein; InterPro IPR008172; KEGG: fbc:FB2170_06650 hypothetical protein; PFAM: Adenylate cyclase; SPTR: Adenylate cyclase; adenylate cyclase 1306044 11054021 Murru_1200 Muricauda ruestringensis DSM 13258 adenylate cyclase YP_004787665.1 1305571 R 886377 CDS YP_004787666.1 344202523 11054022 1306072..1307172 1 NC_015945.1 PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family; COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; HAMAP: DNA polymerase IV; InterPro IPR001126:IPR022880; KEGG: fbc:FB2170_06605 DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like; PRIAM: DNA-directed DNA polymerase; SPTR: DNA polymerase IV; DNA polymerase IV 1307172 11054022 Murru_1201 Muricauda ruestringensis DSM 13258 DNA polymerase IV YP_004787666.1 1306072 D 886377 CDS YP_004787667.1 344202524 11054023 complement(1307304..1310084) 1 NC_015945.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: fbc:FB2170_12151 peptidase, M16 family protein; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; SPTR: Peptidase, M16 family protein; peptidase M16 domain-containing protein 1310084 11054023 Murru_1202 Muricauda ruestringensis DSM 13258 peptidase M16 domain-containing protein YP_004787667.1 1307304 R 886377 CDS YP_004787668.1 344202525 11054024 1310311..1310889 1 NC_015945.1 PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: fjo:Fjoh_2965 TetR family transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family protein; regulatory protein TetR 1310889 11054024 Murru_1203 Muricauda ruestringensis DSM 13258 regulatory protein TetR YP_004787668.1 1310311 D 886377 CDS YP_004787669.1 344202526 11054025 complement(1310955..1312397) 1 NC_015945.1 PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; COGs: COG0469 Pyruvate kinase; InterPro IPR015793:IPR015795:IPR001697; KEGG: fbc:FB2170_06580 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, C-terminal-like; PRIAM: Pyruvate kinase; SPTR: Pyruvate kinase; TIGRFAM: Pyruvate kinase; pyruvate kinase 1312397 11054025 Murru_1204 Muricauda ruestringensis DSM 13258 pyruvate kinase YP_004787669.1 1310955 R 886377 CDS YP_004787670.1 344202527 11054026 complement(1312400..1312870) 1 NC_015945.1 KEGG: fbc:FB2170_06575 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1312870 11054026 Murru_1205 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787670.1 1312400 R 886377 CDS YP_004787671.1 344202528 11054027 complement(1312977..1313714) 1 NC_015945.1 PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial; COGs: COG0571 dsRNA-specific ribonuclease; HAMAP: Ribonuclease III, bacterial; InterPro IPR000999:IPR001159:IPR011907; KEGG: rbi:RB2501_07545 putative ribonuclease III; PFAM: Ribonuclease III; Double-stranded RNA-binding; PRIAM: Ribonuclease III; SMART: Ribonuclease III; Double-stranded RNA-binding; SPTR: Putative ribonuclease III; TIGRFAM: Ribonuclease III, bacterial; ribonuclease 3 1313714 11054027 Murru_1206 Muricauda ruestringensis DSM 13258 ribonuclease 3 YP_004787671.1 1312977 R 886377 CDS YP_004787672.1 344202529 11054028 complement(1313724..1314974) 1 NC_015945.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR014030:IPR014031:IPR017568:IPR020841; KEGG: rbi:RB2501_07540 putative 3-oxoacyl-[acyl-carrier-protein] synthase II; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase II; SMART: Polyketide synthase, beta-ketoacyl synthase domain; SPTR: Putative 3-oxoacyl-[acyl-carrier-protein] synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; 3-oxoacyl-ACP synthase 1314974 11054028 Murru_1207 Muricauda ruestringensis DSM 13258 3-oxoacyl-ACP synthase YP_004787672.1 1313724 R 886377 CDS YP_004787673.1 344202530 11054029 complement(1315077..1315310) 1 NC_015945.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; COGs: COG0236 Acyl carrier protein; HAMAP: Acyl carrier protein (ACP); InterPro IPR006163:IPR003231; KEGG: rbi:RB2501_07535 acyl carrier protein; PFAM: Phosphopantetheine-binding; SPTR: Acyl carrier protein; TIGRFAM: Acyl carrier protein (ACP); acyl carrier protein 1315310 11054029 Murru_1208 Muricauda ruestringensis DSM 13258 acyl carrier protein YP_004787673.1 1315077 R 886377 CDS YP_004787674.1 344202531 11054030 1315473..1316036 1 NC_015945.1 PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; InterPro IPR002376; KEGG: fbc:FB2170_06555 phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal; PRIAM: Phosphoribosylglycinamide formyltransferase; SPTR: Phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase 1316036 11054030 Murru_1209 Muricauda ruestringensis DSM 13258 phosphoribosylglycinamide formyltransferase YP_004787674.1 1315473 D 886377 CDS YP_004787675.1 344202532 11054031 1316037..1316672 1 NC_015945.1 PFAM: RNase H; Caulimovirus viroplasmin; COGs: COG3341 double-stranded RNA/RNA-DNA hybrid binding protein; KEGG: fbc:FB2170_06550 ribonuclease H-like protein; SPTR: Ribonuclease H-related protein; ribonuclease H-like protein 1316672 11054031 Murru_1210 Muricauda ruestringensis DSM 13258 ribonuclease H-like protein YP_004787675.1 1316037 D 886377 CDS YP_004787676.1 344202533 11054032 1316967..1317893 1 NC_015945.1 PFAM: pfkB family carbohydrate kinase; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: fbc:FB2170_06545 carbohydrate kinase, PfkB family protein; PFAM: Carbohydrate/purine kinase; SPTR: Carbohydrate kinase, PfkB family protein; PfkB domain-containing protein 1317893 11054032 Murru_1211 Muricauda ruestringensis DSM 13258 PfkB domain-containing protein YP_004787676.1 1316967 D 886377 CDS YP_004787677.1 344202534 11054033 1317938..1319836 1 NC_015945.1 PFAM: Glutamine amidotransferases class-II; COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; InterPro IPR000583; KEGG: fbc:FB2170_06540 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; PRIAM: Amidophosphoribosyltransferase; SPTR: Amidophosphoribosyltransferase; Amidophosphoribosyltransferase 1319836 11054033 Murru_1212 Muricauda ruestringensis DSM 13258 Amidophosphoribosyltransferase YP_004787677.1 1317938 D 886377 CDS YP_004787678.1 344202535 11054034 complement(1320494..1321102) 1 NC_015945.1 PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain; COGs: COG0605 Superoxide dismutase; InterPro IPR019831:IPR019832; KEGG: fbc:FB2170_06535 superoxide dismutase, Mn family protein; PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; PRIAM: Superoxide dismutase; SPTR: Superoxide dismutase; Superoxide dismutase 1321102 11054034 Murru_1213 Muricauda ruestringensis DSM 13258 Superoxide dismutase YP_004787678.1 1320494 R 886377 CDS YP_004787679.1 344202536 11054035 1321221..1324343 1 NC_015945.1 PFAM: UvrD/REP helicase; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212; KEGG: fbc:FB2170_06530 ATP-dependent helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: ATP-dependent helicase; UvrD/REP helicase 1324343 11054035 Murru_1214 Muricauda ruestringensis DSM 13258 UvrD/REP helicase YP_004787679.1 1321221 D 886377 CDS YP_004787680.1 344202537 11054036 1324358..1325551 1 NC_015945.1 PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 2-amino-3-ketobutyrate coenzyme A ligase; COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839:IPR011282; KEGG: fbc:FB2170_06525 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: Aminotransferase, class I/classII; PRIAM: Glycine C-acetyltransferase; SPTR: 2-amino-3-ketobutyrate coenzyme A ligase; TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; 2-amino-3-ketobutyrate CoA ligase 1325551 11054036 Murru_1215 Muricauda ruestringensis DSM 13258 2-amino-3-ketobutyrate CoA ligase YP_004787680.1 1324358 D 886377 CDS YP_004787681.1 344202538 11054037 1325675..1327033 1 NC_015945.1 PFAM: OmpA family; Thrombospondin type 3 repeat; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR003367:IPR006665; KEGG: rbi:RB2501_07490 thrombospondin type 3 repeat:OmpA/MotB; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Thrombospondin, type 3-like repeat; SPTR: Thrombospondin type 3 repeat:OmpA/MotB; OmpA/MotB domain-containing protein 1327033 11054037 Murru_1216 Muricauda ruestringensis DSM 13258 OmpA/MotB domain-containing protein YP_004787681.1 1325675 D 886377 CDS YP_004787682.1 344202539 11054038 1327096..1329828 1 NC_015945.1 KEGG: fbc:FB2170_06515 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 1329828 11054038 Murru_1217 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787682.1 1327096 D 886377 CDS YP_004787683.1 344202540 11054039 complement(1329829..1330539) 1 NC_015945.1 PFAM: short chain dehydrogenase; COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: fbc:FB2170_06510 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short chain dehydrogenase; 3-oxoacyl-ACP reductase 1330539 11054039 Murru_1218 Muricauda ruestringensis DSM 13258 3-oxoacyl-ACP reductase YP_004787683.1 1329829 R 886377 CDS YP_004787684.1 344202541 11054040 1330675..1331634 1 NC_015945.1 PFAM: WD40-like Beta Propeller Repeat; InterPro IPR011659; KEGG: dfe:Dfer_1770 WD40 domain protein beta propeller; PFAM: WD40-like Beta Propeller; SPTR: Putative uncharacterized protein; WD40-like beta Propeller containing protein 1331634 11054040 Murru_1219 Muricauda ruestringensis DSM 13258 WD40-like beta Propeller containing protein YP_004787684.1 1330675 D 886377 CDS YP_004787685.1 344202542 11054041 complement(1331577..1331726) 1 NC_015945.1 hypothetical protein 1331726 11054041 Murru_1220 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787685.1 1331577 R 886377 CDS YP_004787686.1 344202543 11054042 1331848..1332231 1 NC_015945.1 KEGG: dfe:Dfer_0503 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1332231 11054042 Murru_1221 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787686.1 1331848 D 886377 CDS YP_004787687.1 344202544 11054043 1332312..1333181 1 NC_015945.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: fbc:FB2170_04365 hypothetical protein; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase; manually curated; pseudouridine synthase 1333181 11054043 Murru_1222 Muricauda ruestringensis DSM 13258 pseudouridine synthase YP_004787687.1 1332312 D 886377 CDS YP_004787688.1 344202545 11054045 complement(1333350..1334147) 1 NC_015945.1 PFAM: Universal stress protein family; InterPro IPR006016; KEGG: fbc:FB2170_06460 hypothetical protein; PFAM: UspA; SPTR: Putative uncharacterized protein; UspA domain-containing protein 1334147 11054045 Murru_1223 Muricauda ruestringensis DSM 13258 UspA domain-containing protein YP_004787688.1 1333350 R 886377 CDS YP_004787689.1 344202546 11054046 1334201..1334701 1 NC_015945.1 PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: fbc:FB2170_06455 putative acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Predicted acetyltransferase; N-acetyltransferase GCN5 1334701 11054046 Murru_1224 Muricauda ruestringensis DSM 13258 N-acetyltransferase GCN5 YP_004787689.1 1334201 D 886377 CDS YP_004787690.1 344202547 11054047 1334714..1336048 1 NC_015945.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: fbc:FB2170_06450 hypothetical protein; PFAM: Multi antimicrobial extrusion protein; SPTR: Putative uncharacterized protein; TIGRFAM: Multi antimicrobial extrusion protein; MATE efflux family protein 1336048 11054047 Murru_1225 Muricauda ruestringensis DSM 13258 MATE efflux family protein YP_004787690.1 1334714 D 886377 CDS YP_004787691.1 344202548 11054048 1336091..1336858 1 NC_015945.1 PFAM: Enoyl-CoA hydratase/isomerase family; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: fbc:FB2170_06445 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core; SPTR: Enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1336858 11054048 Murru_1226 Muricauda ruestringensis DSM 13258 enoyl-CoA hydratase/isomerase YP_004787691.1 1336091 D 886377 CDS YP_004787692.1 344202549 11054049 1336863..1337003 1 NC_015945.1 hypothetical protein 1337003 11054049 Murru_1227 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787692.1 1336863 D 886377 CDS YP_004787693.1 344202550 11054050 1337015..1337107 1 NC_015945.1 hypothetical protein 1337107 11054050 Murru_1228 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787693.1 1337015 D 886377 CDS YP_004787694.1 344202551 11054051 1337167..1337430 1 NC_015945.1 KEGG: fps:FP1231 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1337430 11054051 Murru_1229 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787694.1 1337167 D 886377 CDS YP_004787695.1 344202552 11054052 1337427..1337693 1 NC_015945.1 InterPro IPR007712; KEGG: mar:MAE_55750 hypothetical protein; PFAM: Plasmid stabilisation system; SPTR: Putative uncharacterized protein; plasmid stabilization system 1337693 11054052 Murru_1230 Muricauda ruestringensis DSM 13258 plasmid stabilization system YP_004787695.1 1337427 D 886377 CDS YP_004787696.1 344202553 11054053 1337700..1338467 1 NC_015945.1 COGs: COG2908 conserved hypothetical protein; InterPro IPR004843; KEGG: fbc:FB2170_06395 putative UDP-2,3-diacylglucosamine hydrolase; PFAM: Metallo-dependent phosphatase; SPTR: Putative UDP-2,3-diacylglucosamine hydrolase; metallophosphoesterase 1338467 11054053 Murru_1231 Muricauda ruestringensis DSM 13258 metallophosphoesterase YP_004787696.1 1337700 D 886377 CDS YP_004787697.1 344202554 11054054 complement(1338464..1339723) 1 NC_015945.1 PFAM: Bacterial protein of unknown function (DUF894); InterPro IPR011701; KEGG: rbi:RB2501_13114 putative transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Putative transporter; major facilitator superfamily protein 1339723 11054054 Murru_1232 Muricauda ruestringensis DSM 13258 major facilitator superfamily protein YP_004787697.1 1338464 R 886377 CDS YP_004787698.1 344202555 11054055 complement(1339730..1341418) 1 NC_015945.1 PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR001667:IPR003156:IPR004610; KEGG: fbc:FB2170_06385 single-stranded-DNA-specific exonuclease RecJ; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR: Single-stranded-DNA-specific exonuclease recJ; TIGRFAM: Bacterial RecJ exonuclease; single-stranded-DNA-specific exonuclease RecJ 1341418 11054055 Murru_1233 Muricauda ruestringensis DSM 13258 single-stranded-DNA-specific exonuclease RecJ YP_004787698.1 1339730 R 886377 CDS YP_004787699.1 344202556 11054056 complement(1341486..1341776) 1 NC_015945.1 PFAM: GIY-YIG catalytic domain; COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: fjo:Fjoh_0254 excinuclease ABC subunit C; PFAM: Excinuclease ABC, C subunit, N-terminal; SMART: Excinuclease ABC, C subunit, N-terminal; SPTR: Predicted endonuclease containing a URI domain; excinuclease ABC C subunit domain-containing protein 1341776 11054056 Murru_1234 Muricauda ruestringensis DSM 13258 excinuclease ABC C subunit domain-containing protein YP_004787699.1 1341486 R 886377 CDS YP_004787700.1 344202557 11054057 complement(1341777..1341917) 1 NC_015945.1 hypothetical protein 1341917 11054057 Murru_1235 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787700.1 1341777 R 886377 CDS YP_004787701.1 344202558 11054058 complement(1342036..1342458) 1 NC_015945.1 PFAM: OsmC-like protein; COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: fbc:FB2170_06380 hypothetical protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: OsmC family protein; OsmC family protein 1342458 11054058 Murru_1236 Muricauda ruestringensis DSM 13258 OsmC family protein YP_004787701.1 1342036 R 886377 CDS YP_004787702.1 344202559 11054059 1342514..1343116 1 NC_015945.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain; InterPro IPR003779; KEGG: cat:CA2559_02815 probable fusion protein; PFAM: Carboxymuconolactone decarboxylase; SPTR: Carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 1343116 11054059 Murru_1237 Muricauda ruestringensis DSM 13258 carboxymuconolactone decarboxylase YP_004787702.1 1342514 D 886377 CDS YP_004787703.1 344202560 11054060 1343272..1343442 1 NC_015945.1 hypothetical protein 1343442 11054060 Murru_1238 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787703.1 1343272 D 886377 CDS YP_004787704.1 344202561 11054061 complement(1343435..1344007) 1 NC_015945.1 PFAM: Uracil DNA glycosylase superfamily; COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005122; KEGG: fbc:FB2170_06375 hypothetical protein; PFAM: Uracil-DNA glycosylase-like; SPTR: Putative uncharacterized protein; uracil-DNA glycosylase 1344007 11054061 Murru_1239 Muricauda ruestringensis DSM 13258 uracil-DNA glycosylase YP_004787704.1 1343435 R 886377 CDS YP_004787705.1 344202562 11054062 complement(1344098..1344571) 1 NC_015945.1 KEGG: vsp:VS_II1421 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1344571 11054062 Murru_1240 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787705.1 1344098 R 886377 CDS YP_004787706.1 344202563 11054063 complement(1344596..1344946) 1 NC_015945.1 KEGG: sil:SPO0259 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1344946 11054063 Murru_1241 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787706.1 1344596 R 886377 CDS YP_004787707.1 344202564 11054064 complement(1344956..1345306) 1 NC_015945.1 KEGG: srm:SRM_01474 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1345306 11054064 Murru_1242 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787707.1 1344956 R 886377 CDS YP_004787708.1 344202565 11054065 complement(1345383..1346450) 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: dsa:Desal_2278 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Putative uncharacterized protein; AraC family transcriptional regulator 1346450 11054065 Murru_1243 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004787708.1 1345383 R 886377 CDS YP_004787709.1 344202566 11054066 1346614..1347021 1 NC_015945.1 KEGG: mtt:Ftrac_3770 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1347021 11054066 Murru_1244 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787709.1 1346614 D 886377 CDS YP_004787710.1 344202567 11054067 1347021..1347218 1 NC_015945.1 PFAM: Helix-turn-helix; COGs: COG1476 transcriptional regulator protein; InterPro IPR001387; KEGG: mtt:Ftrac_3771 transcriptional regulator, xre family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, PBSX family protein; XRE family transcriptional regulator 1347218 11054067 Murru_1245 Muricauda ruestringensis DSM 13258 XRE family transcriptional regulator YP_004787710.1 1347021 D 886377 CDS YP_004787711.1 344202568 11054068 complement(1347215..1347889) 1 NC_015945.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; COGs: COG0313 methyltransferase; HAMAP: Ribosomal RNA small subunit methyltransferase I; InterPro IPR000878:IPR008189; KEGG: fps:FP1061 methyltransferase; PFAM: Tetrapyrrole methylase; SPTR: Methyltransferase; TIGRFAM: Uncharacterised protein family UPF0011; ribosomal RNA small subunit methyltransferase I 1347889 11054068 Murru_1246 Muricauda ruestringensis DSM 13258 ribosomal RNA small subunit methyltransferase I YP_004787711.1 1347215 R 886377 CDS YP_004787712.1 344202569 11054069 complement(1348089..1348778) 1 NC_015945.1 KEGG: fbc:FB2170_06350 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1348778 11054069 Murru_1247 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787712.1 1348089 R 886377 CDS YP_004787713.1 344202570 11054070 1348934..1349578 1 NC_015945.1 PFAM: Thymidine kinase; COGs: COG1435 Thymidine kinase; InterPro IPR001267; KEGG: fbc:FB2170_06340 putative thymidine kinase; PFAM: Thymidine kinase; PRIAM: Thymidine kinase; SPTR: Thymidine kinase; thymidine kinase 1349578 11054070 Murru_1248 Muricauda ruestringensis DSM 13258 thymidine kinase YP_004787713.1 1348934 D 886377 CDS YP_004787714.1 344202571 11054071 1349571..1350680 1 NC_015945.1 PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase; COGs: COG0787 Alanine racemase; HAMAP: Alanine racemase; InterPro IPR000821:IPR001608:IPR011079; KEGG: fbc:FB2170_06335 alanine racemase; PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal; PRIAM: Alanine racemase; SPTR: Alanine racemase; TIGRFAM: Alanine racemase; alanine racemase 1350680 11054071 Murru_1249 Muricauda ruestringensis DSM 13258 alanine racemase YP_004787714.1 1349571 D 886377 CDS YP_004787715.1 344202572 11054072 1350733..1351140 1 NC_015945.1 PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein; COGs: COG1970 Large-conductance mechanosensitive channel; HAMAP: Large-conductance mechanosensitive channel; InterPro IPR001185; KEGG: pru:PRU_1675 large conductance mechanosensitive channel protein; PFAM: Large-conductance mechanosensitive channel; SPTR: Large-conductance mechanosensitive channel; TIGRFAM: Large-conductance mechanosensitive channel; Large-conductance mechanosensitive channel 1351140 11054072 Murru_1250 Muricauda ruestringensis DSM 13258 Large-conductance mechanosensitive channel YP_004787715.1 1350733 D 886377 CDS YP_004787716.1 344202573 11054073 1351334..1352347 1 NC_015945.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms); COGs: COG0136 Aspartate-semialdehyde dehydrogenase; InterPro IPR000534:IPR012280:IPR005986; KEGG: fbc:FB2170_06325 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD-binding; PRIAM: Aspartate-semialdehyde dehydrogenase; SMART: Semialdehyde dehydrogenase, NAD-binding; SPTR: Aspartate-semialdehyde dehydrogenase; TIGRFAM: Aspartate-semialdehyde dehydrogenase, bacterial; aspartate-semialdehyde dehydrogenase 1352347 11054073 Murru_1251 Muricauda ruestringensis DSM 13258 aspartate-semialdehyde dehydrogenase YP_004787716.1 1351334 D 886377 CDS YP_004787717.1 344202574 11054074 complement(1352382..1353116) 1 NC_015945.1 PFAM: Protein of unknown function (Porph_ging); InterPro IPR019115; KEGG: zpr:ZPR_0171 hypothetical protein; PFAM: Uncharacterised protein family, bacteroidetes; SPTR: Putative uncharacterized protein; hypothetical protein 1353116 11054074 Murru_1252 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787717.1 1352382 R 886377 CDS YP_004787718.1 344202575 11054075 complement(1353123..1353314) 1 NC_015945.1 hypothetical protein 1353314 11054075 Murru_1253 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787718.1 1353123 R 886377 CDS YP_004787719.1 344202576 11054076 1353532..1355685 1 NC_015945.1 PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family; COGs: COG1505 Serine protease of the peptidase family S9A; InterPro IPR004106:IPR001375; KEGG: fbc:FB2170_06320 prolyl endopeptidase; PFAM: Peptidase S9A, oligopeptidase, N-terminal beta-propeller; Peptidase S9, prolyl oligopeptidase, catalytic domain; PRIAM: Prolyl oligopeptidase; SPTR: Prolyl endopeptidase; prolyl oligopeptidase 1355685 11054076 Murru_1254 Muricauda ruestringensis DSM 13258 prolyl oligopeptidase YP_004787719.1 1353532 D 886377 CDS YP_004787720.1 344202577 11054077 1355751..1356746 1 NC_015945.1 PFAM: ABC transporter; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_06315 iron(III) ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Iron(III) ABC transporter ATP-binding protein; Fe(3+)-transporting ATPase 1356746 11054077 Murru_1255 Muricauda ruestringensis DSM 13258 Fe(3+)-transporting ATPase YP_004787720.1 1355751 D 886377 CDS YP_004787721.1 344202578 11054078 1356724..1357128 1 NC_015945.1 PFAM: RF-1 domain; COGs: COG1186 Protein chain release factor B; InterPro IPR000352; KEGG: fbc:FB2170_06310 class I peptide chain release factor; PFAM: Peptide chain release factor class I/class II; SPTR: Class I peptide chain release factor; manually curated; class I peptide chain release factor 1357128 11054078 Murru_1256 Muricauda ruestringensis DSM 13258 class I peptide chain release factor YP_004787721.1 1356724 D 886377 CDS YP_004787722.1 344202579 11054079 1357300..1357797 1 NC_015945.1 KEGG: pjd:Pjdr2_2700 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1357797 11054079 Murru_1257 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787722.1 1357300 D 886377 CDS YP_004787723.1 344202580 11054080 1358225..1360840 1 NC_015945.1 PFAM: Zinc carboxypeptidase; InterPro IPR000834; KEGG: sus:Acid_6585 hypothetical protein; PFAM: Peptidase M14, carboxypeptidase A; SPTR: Putative uncharacterized protein; peptidase M14 carboxypeptidase A 1360840 11054080 Murru_1258 Muricauda ruestringensis DSM 13258 peptidase M14 carboxypeptidase A YP_004787723.1 1358225 D 886377 CDS YP_004787724.1 344202581 11054081 1360920..1362032 1 NC_015945.1 KEGG: bfs:BF1081 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1362032 11054081 Murru_1259 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787724.1 1360920 D 886377 CDS YP_004787725.1 344202582 11054082 complement(1362047..1362802) 1 NC_015945.1 PFAM: Sulfite exporter TauE/SafE; InterPro IPR002781; KEGG: rbi:RB2501_07325 hypothetical protein; PFAM: Protein of unknown function DUF81; SPTR: Putative uncharacterized protein; hypothetical protein 1362802 11054082 Murru_1260 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787725.1 1362047 R 886377 CDS YP_004787726.1 344202583 11054083 1362871..1364673 1 NC_015945.1 PFAM: Sodium:solute symporter family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: rbi:RB2501_07330 sodium/glucose cotransporter; PFAM: Sodium/solute symporter; SPTR: Na+/solute symporter; Na+/solute symporter 1364673 11054083 Murru_1261 Muricauda ruestringensis DSM 13258 Na+/solute symporter YP_004787726.1 1362871 D 886377 CDS YP_004787727.1 344202584 11054084 complement(1364674..1365315) 1 NC_015945.1 PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit; COGs: COG0307 Riboflavin synthase alpha chain; InterPro IPR001783; KEGG: fps:FP2383 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; PRIAM: Riboflavin synthase; SPTR: Riboflavin synthase, alpha subunit; TIGRFAM: Lumazine-binding protein; riboflavin synthase subunit alpha 1365315 11054084 Murru_1262 Muricauda ruestringensis DSM 13258 riboflavin synthase subunit alpha YP_004787727.1 1364674 R 886377 CDS YP_004787728.1 344202585 11054085 1365323..1366375 1 NC_015945.1 PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; COGs: COG1995 Pyridoxal phosphate biosynthesis protein; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; InterPro IPR005255; KEGG: cat:CA2559_02330 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; PRIAM: 4-hydroxythreonine-4-phosphate dehydrogenase; SPTR: 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 1366375 11054085 Murru_1263 Muricauda ruestringensis DSM 13258 4-hydroxythreonine-4-phosphate dehydrogenase YP_004787728.1 1365323 D 886377 CDS YP_004787729.1 344202586 11054086 1366441..1367019 1 NC_015945.1 PFAM: Uncharacterized ACR, COG1399; InterPro IPR003772; KEGG: rbi:RB2501_07350 hypothetical protein; PFAM: Protein of unknown function DUF177; SPTR: Putative uncharacterized protein; hypothetical protein 1367019 11054086 Murru_1264 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787729.1 1366441 D 886377 CDS YP_004787730.1 344202587 11054087 1367027..1367227 1 NC_015945.1 PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; HAMAP: Ribosomal protein L32p; InterPro IPR002677; KEGG: fbc:FB2170_06265 50S ribosomal protein L32; PFAM: Ribosomal protein L32p; SPTR: 50S ribosomal protein L32; TIGRFAM: Ribosomal protein L32p; 50S ribosomal protein L32 1367227 11054087 Murru_1265 Muricauda ruestringensis DSM 13258 50S ribosomal protein L32 YP_004787730.1 1367027 D 886377 CDS YP_004787731.1 344202588 11054088 1367403..1368398 1 NC_015945.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); InterPro IPR004655:IPR013751:IPR013747; KEGG: cat:CA2559_02345 3-oxoacyl-(acyl carrier protein) synthase; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase I; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase 3 1; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); 3-oxoacyl-ACP synthase 1368398 11054088 Murru_1266 Muricauda ruestringensis DSM 13258 3-oxoacyl-ACP synthase YP_004787731.1 1367403 D 886377 CDS YP_004787732.1 344202589 11054089 1368425..1368928 1 NC_015945.1 PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; COGs: COG0511 Biotin carboxyl carrier protein; InterPro IPR000089:IPR001249; KEGG: fbc:FB2170_06275 acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: Biotin/lipoyl attachment; SPTR: Acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1368928 11054089 Murru_1267 Muricauda ruestringensis DSM 13258 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_004787732.1 1368425 D 886377 CDS YP_004787733.1 344202590 11054090 1369013..1370371 1 NC_015945.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR005482:IPR005481:IPR005479:IPR004549; KEGG: fbc:FB2170_06280 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; PRIAM: Biotin carboxylase; SMART: Biotin carboxylase, C-terminal; SPTR: Acetyl-CoA carboxylase, biotin carboxylase; TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; acetyl-CoA carboxylase, biotin carboxylase 1370371 11054090 Murru_1268 Muricauda ruestringensis DSM 13258 acetyl-CoA carboxylase, biotin carboxylase YP_004787733.1 1369013 D 886377 CDS YP_004787734.1 344202591 11054091 1370512..1371630 1 NC_015945.1 PFAM: FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: fbc:FB2170_06285 oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Oxidoreductase; FAD dependent oxidoreductase 1371630 11054091 Murru_1269 Muricauda ruestringensis DSM 13258 FAD dependent oxidoreductase YP_004787734.1 1370512 D 886377 CDS YP_004787735.1 344202592 11054092 complement(1371908..1372570) 1 NC_015945.1 PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_07874 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; phosphonate-transporting ATPase 1372570 11054092 Murru_1270 Muricauda ruestringensis DSM 13258 phosphonate-transporting ATPase YP_004787735.1 1371908 R 886377 CDS YP_004787736.1 344202593 11054093 complement(1372580..1375012) 1 NC_015945.1 PFAM: Predicted permease; TIGRFAM: Acidobacterial duplicated orphan permease; InterPro IPR003838; KEGG: fbc:FB2170_07854 ABC transporter permease; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: ABC transporter, permease protein; hypothetical protein 1375012 11054093 Murru_1271 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787736.1 1372580 R 886377 CDS YP_004787737.1 344202594 11054094 complement(1375032..1377431) 1 NC_015945.1 PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: fbc:FB2170_07864 putative ABC transporter permease; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative ABC transporter permease; hypothetical protein 1377431 11054094 Murru_1272 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787737.1 1375032 R 886377 CDS YP_004787738.1 344202595 11054095 complement(1377500..1379914) 1 NC_015945.1 PFAM: Predicted permease; InterPro IPR003838; KEGG: sli:Slin_2206 protein of unknown function DUF214; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative ABC transporter permease; hypothetical protein 1379914 11054095 Murru_1273 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787738.1 1377500 R 886377 CDS YP_004787739.1 344202596 11054096 complement(1379937..1382354) 1 NC_015945.1 PFAM: Predicted permease; TIGRFAM: Acidobacterial duplicated orphan permease; InterPro IPR003838; KEGG: dfe:Dfer_4840 protein of unknown function DUF214; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative uncharacterized protein; hypothetical protein 1382354 11054096 Murru_1274 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787739.1 1379937 R 886377 CDS YP_004787740.1 344202597 11054097 complement(1382377..1384812) 1 NC_015945.1 PFAM: Predicted permease; TIGRFAM: Acidobacterial duplicated orphan permease; InterPro IPR003838; KEGG: fbc:FB2170_07859 putative ABC transporter permease; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative ABC transporter permease; hypothetical protein 1384812 11054097 Murru_1275 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787740.1 1382377 R 886377 CDS YP_004787741.1 344202598 11054098 complement(1384852..1385547) 1 NC_015945.1 PFAM: ABC transporter; TIGRFAM: putative bacteriocin export ABC transporter, lactococcin 972 group; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_07844 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; phosphonate-transporting ATPase 1385547 11054098 Murru_1276 Muricauda ruestringensis DSM 13258 phosphonate-transporting ATPase YP_004787741.1 1384852 R 886377 CDS YP_004787742.1 344202599 11054099 complement(1385616..1386866) 1 NC_015945.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fbc:FB2170_07839 RND family efflux transporter MFP subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, MFP component, RND family protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 1386866 11054099 Murru_1277 Muricauda ruestringensis DSM 13258 RND family efflux transporter MFP subunit YP_004787742.1 1385616 R 886377 CDS YP_004787743.1 344202600 11054100 complement(1386874..1388208) 1 NC_015945.1 PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fbc:FB2170_07834 putative outer membrane transport/efflux protein; PFAM: Outer membrane efflux protein; SPTR: Putative outer membrane transport/efflux protein; outer membrane efflux protein 1388208 11054100 Murru_1278 Muricauda ruestringensis DSM 13258 outer membrane efflux protein YP_004787743.1 1386874 R 886377 CDS YP_004787744.1 344202601 11054101 1388413..1389777 1 NC_015945.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078:IPR002197; KEGG: fbc:FB2170_07829 two-component system response regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core; SPTR: Two-component system response regulator; two component sigma-54 specific Fis family transcriptional regulator 1389777 11054101 Murru_1279 Muricauda ruestringensis DSM 13258 two component sigma-54 specific Fis family transcriptional regulator YP_004787744.1 1388413 D 886377 CDS YP_004787745.1 344202602 11054102 1389777..1391129 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR000014:IPR003594; KEGG: fbc:FB2170_07824 putative two-component system sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; PAS; SPTR: Putative two-component system sensor histidine kinase; multi-sensor signal transduction histidine kinase 1391129 11054102 Murru_1280 Muricauda ruestringensis DSM 13258 multi-sensor signal transduction histidine kinase YP_004787745.1 1389777 D 886377 CDS YP_004787746.1 344202603 11054103 1391137..1391577 1 NC_015945.1 PFAM: Transcription elongation factor, GreA/GreB, C-term; KEGG: fbc:FB2170_06295 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1391577 11054103 Murru_1281 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787746.1 1391137 D 886377 CDS YP_004787747.1 344202604 11054104 1391738..1392862 1 NC_015945.1 PFAM: Putative esterase; COGs: COG2382 Enterochelin esterase; InterPro IPR000801; KEGG: fbc:FB2170_09501 putative esterase; PFAM: Putative esterase; SPTR: Putative esterase; esterase 1392862 11054104 Murru_1282 Muricauda ruestringensis DSM 13258 esterase YP_004787747.1 1391738 D 886377 CDS YP_004787748.1 344202605 11054105 1392965..1393849 1 NC_015945.1 InterPro IPR011659; KEGG: sdn:Sden_2087 hypothetical protein; PFAM: WD40-like Beta Propeller; SPTR: Putative uncharacterized protein; WD40-like beta Propeller containing protein 1393849 11054105 Murru_1283 Muricauda ruestringensis DSM 13258 WD40-like beta Propeller containing protein YP_004787748.1 1392965 D 886377 CDS YP_004787749.1 344202606 11054106 complement(1394078..1394713) 1 NC_015945.1 KEGG: rbi:RB2501_10822 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1394713 11054106 Murru_1284 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787749.1 1394078 R 886377 CDS YP_004787750.1 344202607 11054107 complement(1394846..1395205) 1 NC_015945.1 KEGG: gfo:GFO_1058 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1395205 11054107 Murru_1285 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787750.1 1394846 R 886377 CDS YP_004787751.1 344202608 11054108 complement(1395248..1395664) 1 NC_015945.1 PFAM: Transcription elongation factor, GreA/GreB, C-term; COGs: COG0782 Transcription elongation factor; InterPro IPR001437; KEGG: cat:CA2559_13443 GreA/GreB family elongation factor; PFAM: Transcription elongation factor, GreA/GreB, C-terminal; SPTR: Putative uncharacterized protein; GreA/GreB family elongation factor 1395664 11054108 Murru_1286 Muricauda ruestringensis DSM 13258 GreA/GreB family elongation factor YP_004787751.1 1395248 R 886377 CDS YP_004787752.1 344202609 11054109 complement(1395868..1397193) 1 NC_015945.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078:IPR002197; KEGG: cat:CA2559_13448 two component, sigma54 specific, transcriptional regulator, fis family protein; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family protein; two component sigma-54 specific Fis family transcriptional regulator 1397193 11054109 Murru_1287 Muricauda ruestringensis DSM 13258 two component sigma-54 specific Fis family transcriptional regulator YP_004787752.1 1395868 R 886377 CDS YP_004787753.1 344202610 11054110 complement(1397199..1398290) 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003661:IPR003594; KEGG: rbi:RB2501_10837 sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Sensor histidine kinase; histidine kinase 1398290 11054110 Murru_1288 Muricauda ruestringensis DSM 13258 histidine kinase YP_004787753.1 1397199 R 886377 CDS YP_004787754.1 344202611 11054111 complement(1398467..1399678) 1 NC_015945.1 PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Putative esterase; COGs: COG2382 Enterochelin esterase; InterPro IPR000801; KEGG: rbi:RB2501_09110 putative glycosyl hydrolase exoenzyme; PFAM: Putative esterase; SPTR: Putative glycosyl hydrolase exoenzyme; esterase 1399678 11054111 Murru_1289 Muricauda ruestringensis DSM 13258 esterase YP_004787754.1 1398467 R 886377 CDS YP_004787755.1 344202612 11054113 complement(1400096..1400503) 1 NC_015945.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase; InterPro IPR004360:IPR017515; KEGG: fps:FP0237 lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Methylmalonyl-CoA epimerase; TIGRFAM: Methylmalonyl-CoA epimerase; methylmalonyl-CoA epimerase 1400503 11054113 Murru_1290 Muricauda ruestringensis DSM 13258 methylmalonyl-CoA epimerase YP_004787755.1 1400096 R 886377 CDS YP_004787756.1 344202613 11054114 1400606..1401001 1 NC_015945.1 PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; COGs: COG0858 Ribosome-binding factor A; HAMAP: Ribosome-binding factor A; InterPro IPR000238; KEGG: fbc:FB2170_06195 putative ribosome-binding factor A; PFAM: Ribosome-binding factor A; SPTR: Ribosome-binding factor A; TIGRFAM: Ribosome-binding factor A; ribosome-binding factor A 1401001 11054114 Murru_1291 Muricauda ruestringensis DSM 13258 ribosome-binding factor A YP_004787756.1 1400606 D 886377 CDS YP_004787757.1 344202614 11054115 1401004..1402209 1 NC_015945.1 PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: fbc:FB2170_06190 hypothetical protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative uncharacterized protein; hypothetical protein 1402209 11054115 Murru_1292 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787757.1 1401004 D 886377 CDS YP_004787758.1 344202615 11054116 complement(1402206..1403198) 1 NC_015945.1 PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family; COGs: COG0042 tRNA-dihydrouridine synthase; InterPro IPR001269:IPR004652; KEGG: rbi:RB2501_07020 putative TIM-barrel enzyme, putative dehydrogenase, contains a highly conserved dihydrouridine synthase domain; PFAM: tRNA-dihydrouridine synthase; SPTR: tRNA-dihydrouridine synthase; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3; nifR3 family TIM-barrel protein 1403198 11054116 Murru_1293 Muricauda ruestringensis DSM 13258 nifR3 family TIM-barrel protein YP_004787758.1 1402206 R 886377 CDS YP_004787759.1 344202616 11054117 complement(1403251..1405671) 1 NC_015945.1 InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_04060 hypothetical protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Putative uncharacterized protein; TonB-dependent receptor 1405671 11054117 Murru_1294 Muricauda ruestringensis DSM 13258 TonB-dependent receptor YP_004787759.1 1403251 R 886377 CDS YP_004787760.1 344202617 11054118 1405754..1407619 1 NC_015945.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain; COGs: COG0481 Membrane GTPase LepA; HAMAP: GTP-binding protein LepA; InterProIPR006297:IPR000795:IPR004161:IPR000640:IPR 013842:IPR005225; KEGG: rbi:RB2501_06995 GTP-binding protein LepA; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SPTR: Elongation factor 4; TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; GTP-binding protein lepA 1407619 11054118 Murru_1295 Muricauda ruestringensis DSM 13258 GTP-binding protein lepA YP_004787760.1 1405754 D 886377 CDS YP_004787761.1 344202618 11054119 complement(1407870..1408310) 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 1408310 11054119 Murru_1296 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787761.1 1407870 R 886377 CDS YP_004787762.1 344202619 11054120 complement(1408501..1410270) 1 NC_015945.1 PFAM: TrkA-C domain; Citrate transporter; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR004680:IPR006037; KEGG: zpr:ZPR_3645 transport protein; PFAM: Divalent ion symporter; Regulator of K+ conductance, C-terminal; SPTR: Transport protein; citrate transporter 1410270 11054120 Murru_1297 Muricauda ruestringensis DSM 13258 citrate transporter YP_004787762.1 1408501 R 886377 CDS YP_004787763.1 344202620 11054121 complement(1410393..1412246) 1 NC_015945.1 PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; COGs: COG0025 NhaP-type Na+/H+ and K+/H+ antiporter; InterPro IPR006153:IPR003148; KEGG: rbi:RB2501_06990 Na(+):H(+) antiporter, CPA1 family protein; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; SPTR: Na(+):H(+) antiporter, CPA1 family protein; sodium/hydrogen exchanger 1412246 11054121 Murru_1298 Muricauda ruestringensis DSM 13258 sodium/hydrogen exchanger YP_004787763.1 1410393 R 886377 CDS YP_004787764.1 344202621 11054122 1412456..1413322 1 NC_015945.1 PFAM: Metallo-beta-lactamase superfamily; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: fbc:FB2170_06125 metallo-beta-lactamase superfamily protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: Metallo-beta-lactamase superfamily protein; beta-lactamase domain-containing protein 1413322 11054122 Murru_1299 Muricauda ruestringensis DSM 13258 beta-lactamase domain-containing protein YP_004787764.1 1412456 D 886377 CDS YP_004787765.1 344202622 11054123 1413349..1414998 1 NC_015945.1 PFAM: Subtilase family; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: fbc:FB2170_06120 serine protease / subtilase peptidase; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; PRIAM: Subtilisin; SPTR: Serine protease / subtilase peptidase; subtilisin 1414998 11054123 Murru_1300 Muricauda ruestringensis DSM 13258 subtilisin YP_004787765.1 1413349 D 886377 CDS YP_004787766.1 344202623 11054124 1415002..1416855 1 NC_015945.1 PFAM: Peptidase family M1; COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: fbc:FB2170_06115 Zn-dependent aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; SPTR: Zn-dependent aminopeptidase, putative; peptidase M1 membrane alanine aminopeptidase 1416855 11054124 Murru_1301 Muricauda ruestringensis DSM 13258 peptidase M1 membrane alanine aminopeptidase YP_004787766.1 1415002 D 886377 CDS YP_004787767.1 344202624 11054126 complement(1417359..1418345) 1 NC_015945.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: zpr:ZPR_4669 transposase IS116/IS110/IS902 family; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; SPTR: Transposase; transposase IS116/IS110/IS902 family protein 1418345 11054126 Murru_1303 Muricauda ruestringensis DSM 13258 transposase IS116/IS110/IS902 family protein YP_004787767.1 1417359 R 886377 CDS YP_004787768.1 344202625 11054127 1418687..1419181 1 NC_015945.1 PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; HAMAP: Ribonuclease P; InterPro IPR000100; KEGG: fbc:FB2170_06100 ribonuclease P; PFAM: Ribonuclease P; SPTR: Ribonuclease P protein component; TIGRFAM: Ribonuclease P; ribonuclease P protein component 1419181 11054127 Murru_1304 Muricauda ruestringensis DSM 13258 ribonuclease P protein component YP_004787768.1 1418687 D 886377 CDS YP_004787769.1 344202626 11054128 1419165..1420790 1 NC_015945.1 PFAM: Peptidase family S41; TIGRFAM: C-terminal peptidase (prc); COGs: COG0793 Periplasmic protease; InterPro IPR001478:IPR005151:IPR004447; KEGG: fbc:FB2170_06095 carboxy-terminal processing protease; PFAM: Peptidase S41; SMART: Peptidase S41; PDZ/DHR/GLGF; SPTR: Carboxy-terminal processing protease; TIGRFAM: Peptidase S41A, C-terminal peptidase; carboxyl-terminal protease 1420790 11054128 Murru_1305 Muricauda ruestringensis DSM 13258 carboxyl-terminal protease YP_004787769.1 1419165 D 886377 CDS YP_004787770.1 344202627 11054129 1420941..1421891 1 NC_015945.1 PFAM: Predicted membrane protein (DUF2157); COGs: COG4984 membrane protein; InterPro IPR018677; KEGG: bth:BT_1823 hypothetical protein; PFAM: Protein of unknown function DUF2157, membrane; SPTR: Putative uncharacterized protein; hypothetical protein 1421891 11054129 Murru_1306 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787770.1 1420941 D 886377 CDS YP_004787771.1 344202628 11054130 1421879..1422958 1 NC_015945.1 KEGG: bth:BT_1824 putative permease; SPTR: Permease; hypothetical protein 1422958 11054130 Murru_1307 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787771.1 1421879 D 886377 CDS YP_004787772.1 344202629 11054131 1422945..1423433 1 NC_015945.1 COGs: COG4929 Uncharacterized membrane-anchored protein; KEGG: bth:BT_1825 hypothetical protein; SPTR: Membrane protein; hypothetical protein 1423433 11054131 Murru_1308 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787772.1 1422945 D 886377 CDS YP_004787773.1 344202630 11054132 1423449..1424696 1 NC_015945.1 PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm); COGs: COG0270 Site-specific DNA methylase; InterPro IPR001525; KEGG: fbc:FB2170_06040 DNA (cytosine-5-)-methyltransferase; PFAM: C-5 cytosine methyltransferase; SPTR: Cytosine-specific methyltransferase; TIGRFAM: C-5 cytosine methyltransferase; DNA-cytosine methyltransferase 1424696 11054132 Murru_1309 Muricauda ruestringensis DSM 13258 DNA-cytosine methyltransferase YP_004787773.1 1423449 D 886377 CDS YP_004787774.1 344202631 11054133 1424674..1425282 1 NC_015945.1 KEGG: fbc:FB2170_06035 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 1425282 11054133 Murru_1310 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787774.1 1424674 D 886377 CDS YP_004787775.1 344202632 11054134 1425394..1426185 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 1426185 11054134 Murru_1311 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787775.1 1425394 D 886377 CDS YP_004787776.1 344202633 11054135 complement(1426385..1426825) 1 NC_015945.1 PFAM: Acetyltransferase (GNAT) family; COGs: COG2153 acyltransferase; InterPro IPR000182; KEGG: fbc:FB2170_05985 putative acetyltransferase YybD; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Probable acetyltransferase YybD; N-acetyltransferase GCN5 1426825 11054135 Murru_1312 Muricauda ruestringensis DSM 13258 N-acetyltransferase GCN5 YP_004787776.1 1426385 R 886377 CDS YP_004787777.1 344202634 11054136 complement(1426825..1427748) 1 NC_015945.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: fbc:FB2170_05980 cobalt/zinc/cadmium cation efflux pump protein; PFAM: Cation efflux protein; SPTR: Cobalt/zinc/cadmium cation efflux pump protein; TIGRFAM: Cation efflux protein; cation diffusion facilitator family transporter 1427748 11054136 Murru_1313 Muricauda ruestringensis DSM 13258 cation diffusion facilitator family transporter YP_004787777.1 1426825 R 886377 CDS YP_004787778.1 344202635 11054137 complement(1427754..1428185) 1 NC_015945.1 PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family; COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500:IPR004785; KEGG: fbc:FB2170_05975 ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; PRIAM: Ribose-5-phosphate isomerase; SPTR: Ribose 5-phosphate isomerase B, putative; TIGRFAM: Ribose/galactose isomerase; Ribose 5-phosphate isomerase B; RpiB/LacA/LacB family sugar-phosphate isomerase 1428185 11054137 Murru_1314 Muricauda ruestringensis DSM 13258 RpiB/LacA/LacB family sugar-phosphate isomerase YP_004787778.1 1427754 R 886377 CDS YP_004787779.1 344202636 11054138 1428779..1430962 1 NC_015945.1 PFAM: Ribonuclease B OB domain; RNB domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases; COGs: COG0557 Exoribonuclease R; InterProIPR011129:IPR001900:IPR022967:IPR013223:IPR 003029:IPR011805:IPR004476; KEGG: fbc:FB2170_05970 putative exoribonuclease; PFAM: Ribonuclease II/R; Ribonuclease B, N-terminal OB domain; Ribosomal protein S1, RNA-binding domain; SMART: Ribonuclease II/R; Cold shock protein; RNA-binding domain, S1; SPTR: Putative exoribonuclease; TIGRFAM: Ribonuclease R, bacterial; Ribonuclease II/ribonuclease R, bacteria; ribonuclease R 1430962 11054138 Murru_1315 Muricauda ruestringensis DSM 13258 ribonuclease R YP_004787779.1 1428779 D 886377 CDS YP_004787780.1 344202637 11054139 1431015..1431695 1 NC_015945.1 PFAM: Protein of unknown function (DUF2807); KEGG: fbc:FB2170_05965 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1431695 11054139 Murru_1316 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787780.1 1431015 D 886377 CDS YP_004787781.1 344202638 11054140 1431699..1432361 1 NC_015945.1 PFAM: LysE type translocator; InterPro IPR001123; KEGG: fbc:FB2170_05960 hypothetical protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Putative uncharacterized protein; lysine exporter protein LysE/YggA 1432361 11054140 Murru_1317 Muricauda ruestringensis DSM 13258 lysine exporter protein LysE/YggA YP_004787781.1 1431699 D 886377 CDS YP_004787782.1 344202639 11054142 complement(1432619..1432975) 1 NC_015945.1 PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain; COGs: COG1539 Dihydroneopterin aldolase; InterPro IPR006157:IPR006156; KEGG: rbi:RB2501_06880 dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase; SMART: Dihydroneopterin aldolase; SPTR: Dihydroneopterin aldolase; TIGRFAM: Dihydroneopterin aldolase subgroup; Dihydroneopterin aldolase; manually curated; dihydroneopterin aldolase 1432975 11054142 Murru_1318 Muricauda ruestringensis DSM 13258 dihydroneopterin aldolase YP_004787782.1 1432619 R 886377 CDS YP_004787783.1 344202640 11054143 complement(1433021..1433980) 1 NC_015945.1 PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: rbi:RB2501_06875 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein 1433980 11054143 Murru_1319 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787783.1 1433021 R 886377 CDS YP_004787784.1 344202641 11054144 complement(1434003..1447619) 1 NC_015945.1 InterPro IPR008454:IPR001434; KEGG: rbi:RB2501_06870 hypothetical protein; PFAM: Collagen-binding surface protein Cna-like, B-type domain; SPTR: Putative uncharacterized protein; TIGRFAM: Domain of unknown function DUF11; hypothetical protein 1447619 11054144 Murru_1320 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787784.1 1434003 R 886377 CDS YP_004787785.1 344202642 11054145 complement(1447633..1449702) 1 NC_015945.1 PFAM: Protein of unknown function (DUF3308); Sporulation related domain; TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR007730:IPR019861; KEGG: rbi:RB2501_06865 hypothetical protein; PFAM: Sporulation-related domain; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein 1449702 11054145 Murru_1321 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787785.1 1447633 R 886377 CDS YP_004787786.1 344202643 11054146 complement(1449709..1451967) 1 NC_015945.1 KEGG: rbi:RB2501_06860 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1451967 11054146 Murru_1322 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787786.1 1449709 R 886377 CDS YP_004787787.1 344202644 11054147 1452232..1453917 1 NC_015945.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase; COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; HAMAP: Glutaminyl-tRNA synthetase, bacterial; InterPro IPR022861:IPR020058:IPR020059:IPR004514; KEGG: fbc:FB2170_05925 glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; PRIAM: Glutamine--tRNA ligase; SPTR: Glutaminyl-tRNA synthetase; TIGRFAM: Glutaminyl-tRNA synthetase, class Ic; glutaminyl-tRNA synthetase 1453917 11054147 Murru_1323 Muricauda ruestringensis DSM 13258 glutaminyl-tRNA synthetase YP_004787787.1 1452232 D 886377 CDS YP_004787788.1 344202645 11054148 1454234..1454563 1 NC_015945.1 KEGG: fbc:FB2170_00375 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1454563 11054148 Murru_1324 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787788.1 1454234 D 886377 CDS YP_004787789.1 344202646 11054149 1454567..1454917 1 NC_015945.1 PFAM: Protein of unknown function (DUF1469); KEGG: fbc:FB2170_00370 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1454917 11054149 Murru_1325 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787789.1 1454567 D 886377 CDS YP_004787790.1 344202647 11054150 1454914..1455129 1 NC_015945.1 KEGG: rbi:RB2501_06840 glutaminyl-tRNA synthetase; SPTR: Glutaminyl-tRNA synthetase; glutaminyl-tRNA synthetase 1455129 11054150 Murru_1326 Muricauda ruestringensis DSM 13258 glutaminyl-tRNA synthetase YP_004787790.1 1454914 D 886377 CDS YP_004787791.1 344202648 11054151 1455225..1455362 1 NC_015945.1 hypothetical protein 1455362 11054151 Murru_1327 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787791.1 1455225 D 886377 CDS YP_004787792.1 344202649 11054152 complement(1455424..1456359) 1 NC_015945.1 PFAM: SPFH domain / Band 7 family; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107; KEGG: rbi:RB2501_06835 membrane protease protein family protein; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: Membrane protease protein family protein; hypothetical protein 1456359 11054152 Murru_1328 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787792.1 1455424 R 886377 CDS YP_004787793.1 344202650 11054153 complement(1456453..1457949) 1 NC_015945.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family; COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR020058:IPR004527; KEGG: fbc:FB2170_05915 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; PRIAM: Glutamate--tRNA ligase; SPTR: Glutamyl-tRNA synthetase; TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; glutamyl-tRNA synthetase 1457949 11054153 Murru_1329 Muricauda ruestringensis DSM 13258 glutamyl-tRNA synthetase YP_004787793.1 1456453 R 886377 CDS YP_004787794.1 344202651 11054154 1458115..1461534 1 NC_015945.1 KEGG: fbc:FB2170_05905 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1461534 11054154 Murru_1330 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787794.1 1458115 D 886377 CDS YP_004787795.1 344202652 11054155 1461527..1461946 1 NC_015945.1 PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family; COGs: COG0319 metal-dependent hydrolase; HAMAP: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; InterPro IPR002036; KEGG: fbc:FB2170_05900 hypothetical protein; PFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; SPTR: Putative metalloprotease FB2170_05900; TIGRFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; metalloprotease ybeY 1461946 11054155 Murru_1331 Muricauda ruestringensis DSM 13258 metalloprotease ybeY YP_004787795.1 1461527 D 886377 CDS YP_004787796.1 344202653 11054156 1461949..1463817 1 NC_015945.1 PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A; COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; HAMAP: Glucose-inhibited division protein A; InterPro IPR004416:IPR002218; KEGG: fbc:FB2170_05895 glucose-inhibited division protein A; PFAM: Glucose-inhibited division protein A-related; SPTR: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TIGRFAM: Glucose-inhibited division protein A; tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG 1463817 11054156 Murru_1332 Muricauda ruestringensis DSM 13258 tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG YP_004787796.1 1461949 D 886377 CDS YP_004787797.1 344202654 11054157 1464184..1465014 1 NC_015945.1 PFAM: Methyltransferase domain; InterPro IPR013217; KEGG: fbc:FB2170_05890 hypothetical protein; PFAM: Methyltransferase type 12; SPTR: Methyltransferase type 11; type 12 methyltransferase 1465014 11054157 Murru_1333 Muricauda ruestringensis DSM 13258 type 12 methyltransferase YP_004787797.1 1464184 D 886377 CDS YP_004787798.1 344202655 11054158 1465256..1465762 1 NC_015945.1 PFAM: Outer membrane protein (OmpH-like); InterPro IPR005632; KEGG: fbc:FB2170_05885 hypothetical protein; PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH); SPTR: Putative uncharacterized protein; outer membrane chaperone Skp 1465762 11054158 Murru_1334 Muricauda ruestringensis DSM 13258 outer membrane chaperone Skp YP_004787798.1 1465256 D 886377 CDS YP_004787799.1 344202656 11054159 complement(1465818..1466267) 1 NC_015945.1 COGs: COG4270 membrane protein; KEGG: zpr:ZPR_0737 membrane protein; SPTR: Membrane protein; membrane protein 1466267 11054159 Murru_1335 Muricauda ruestringensis DSM 13258 membrane protein YP_004787799.1 1465818 R 886377 CDS YP_004787800.1 344202657 11054160 complement(1466318..1466884) 1 NC_015945.1 PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: zpr:ZPR_0736 protein containing cyclic nucleotide-binding domain; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain; SPTR: Protein containing cyclic nucleotide-binding domain; putative Crp/Fnr family transcriptional regulator 1466884 11054160 Murru_1336 Muricauda ruestringensis DSM 13258 putative Crp/Fnr family transcriptional regulator YP_004787800.1 1466318 R 886377 CDS YP_004787801.1 344202658 11054161 complement(1466901..1467080) 1 NC_015945.1 hypothetical protein 1467080 11054161 Murru_1337 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787801.1 1466901 R 886377 CDS YP_004787802.1 344202659 11054162 complement(1467169..1467564) 1 NC_015945.1 KEGG: fbc:FB2170_05880 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1467564 11054162 Murru_1338 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787802.1 1467169 R 886377 CDS YP_004787803.1 344202660 11054163 1467654..1467881 1 NC_015945.1 hypothetical protein 1467881 11054163 Murru_1339 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787803.1 1467654 D 886377 CDS YP_004787804.1 344202661 11054164 complement(1467794..1468945) 1 NC_015945.1 TIGRFAM: DNA polymerase III, delta' subunit; COGs: COG2812 DNA polymerase III gamma/tau subunits; KEGG: rbi:RB2501_06795 putative DNA polymerase III subunit delta; SPTR: Putative DNA polymerase III, delta subunit; putative DNA polymerase III subunit delta 1468945 11054164 Murru_1340 Muricauda ruestringensis DSM 13258 putative DNA polymerase III subunit delta YP_004787804.1 1467794 R 886377 CDS YP_004787805.1 344202662 11054165 1469326..1470066 1 NC_015945.1 KEGG: rbi:RB2501_07210 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1470066 11054165 Murru_1341 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787805.1 1469326 D 886377 CDS YP_004787806.1 344202663 11054166 complement(1470127..1471080) 1 NC_015945.1 KEGG: rbi:RB2501_04620 putative lipoprotein; SPTR: Putative lipoprotein; putative lipoprotein 1471080 11054166 Murru_1342 Muricauda ruestringensis DSM 13258 putative lipoprotein YP_004787806.1 1470127 R 886377 CDS YP_004787807.1 344202664 11054167 complement(1471146..1471253) 1 NC_015945.1 hypothetical protein 1471253 11054167 Murru_1343 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787807.1 1471146 R 886377 CDS YP_004787808.1 344202665 11054168 1471505..1472695 1 NC_015945.1 PFAM: Phosphoglycerate kinase; COGs: COG0126 3-phosphoglycerate kinase; HAMAP: Phosphoglycerate kinase; InterPro IPR001576; KEGG: fbc:FB2170_05870 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: Phosphoglycerate kinase; phosphoglycerate kinase 1472695 11054168 Murru_1344 Muricauda ruestringensis DSM 13258 phosphoglycerate kinase YP_004787808.1 1471505 D 886377 CDS YP_004787809.1 344202666 11054169 1472813..1474414 1 NC_015945.1 PFAM: Transglycosylase SLT domain; LysM domain; COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR002482:IPR008258:IPR018392; KEGG: fbc:FB2170_05865 membrane-bound lytic murein transglycosylase; PFAM: Lytic transglycosylase-like, catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Membrane-bound lytic murein transglycosylase, putative; lytic transglycosylase 1474414 11054169 Murru_1345 Muricauda ruestringensis DSM 13258 lytic transglycosylase YP_004787809.1 1472813 D 886377 CDS YP_004787810.1 344202667 11054170 1474427..1475425 1 NC_015945.1 KEGG: fbc:FB2170_05860 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1475425 11054170 Murru_1346 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787810.1 1474427 D 886377 CDS YP_004787811.1 344202668 11054171 complement(1475609..1475779) 1 NC_015945.1 KEGG: fbc:FB2170_04085 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1475779 11054171 Murru_1347 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787811.1 1475609 R 886377 CDS YP_004787812.1 344202669 11054172 complement(1476028..1478034) 1 NC_015945.1 PFAM: WD40-like Beta Propeller Repeat; Cna protein B-type domain; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR008454:IPR006665; KEGG: fbc:FB2170_05845 OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; Collagen-binding surface protein Cna-like, B-type domain; SPTR: OmpA family protein; OmpA/MotB domain-containing protein 1478034 11054172 Murru_1348 Muricauda ruestringensis DSM 13258 OmpA/MotB domain-containing protein YP_004787812.1 1476028 R 886377 CDS YP_004787813.1 344202670 11054173 complement(1478297..1478494) 1 NC_015945.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; HAMAP: Twin-arginine translocation protein TatA/E; InterPro IPR006312:IPR003369; KEGG: ran:Riean_1452 twin-arginine translocation protein, TatA/e family subunit; PFAM: Bacterial sec-independent translocation protein MttA/Hcf106; SPTR: Sec-independent protein translocase protein tatA/E homolog; TIGRFAM: Twin-arginine translocation protein TatA/E; Sec-independent protein translocase protein tatA/E-like protein 1478494 11054173 Murru_1349 Muricauda ruestringensis DSM 13258 Sec-independent protein translocase protein tatA/E-like protein YP_004787813.1 1478297 R 886377 CDS YP_004787814.1 344202671 11054174 1478662..1479531 1 NC_015945.1 PFAM: Peptidase family M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: rbi:RB2501_06755 putative peptidase; PFAM: Peptidase M23; SPTR: Putative peptidase; peptidase M23 1479531 11054174 Murru_1350 Muricauda ruestringensis DSM 13258 peptidase M23 YP_004787814.1 1478662 D 886377 CDS YP_004787815.1 344202672 11054175 1479532..1481031 1 NC_015945.1 PFAM: GH3 auxin-responsive promoter; InterPro IPR004993; KEGG: fbc:FB2170_05830 putative auxin-regulated protein; PFAM: GH3 auxin-responsive promoter; SPTR: Putative auxin-regulated protein; manually curated; GH3 auxin-responsive promoter 1481031 11054175 Murru_1351 Muricauda ruestringensis DSM 13258 GH3 auxin-responsive promoter YP_004787815.1 1479532 D 886377 CDS YP_004787816.1 344202673 11054176 1481081..1482769 1 NC_015945.1 KEGG: rbi:RB2501_06745 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1482769 11054176 Murru_1352 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787816.1 1481081 D 886377 CDS YP_004787817.1 344202674 11054177 1482773..1483822 1 NC_015945.1 KEGG: cat:CA2559_02905 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1483822 11054177 Murru_1353 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787817.1 1482773 D 886377 CDS YP_004787818.1 344202675 11054178 1483890..1484666 1 NC_015945.1 PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase; COGs: COG1091 dTDP-4-dehydrorhamnose reductase; InterPro IPR005913; KEGG: fbc:FB2170_05800 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; PRIAM: dTDP-4-dehydrorhamnose reductase; SPTR: dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 1484666 11054178 Murru_1354 Muricauda ruestringensis DSM 13258 dTDP-4-dehydrorhamnose reductase YP_004787818.1 1483890 D 886377 CDS YP_004787819.1 344202676 11054179 1484726..1485787 1 NC_015945.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR001509:IPR005888; KEGG: fps:FP1294 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: dTDP-glucose 4,6-dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 1485787 11054179 Murru_1355 Muricauda ruestringensis DSM 13258 dTDP-glucose 4,6-dehydratase YP_004787819.1 1484726 D 886377 CDS YP_004787820.1 344202677 11054180 1485794..1486663 1 NC_015945.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form; COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005835:IPR005907; KEGG: zpr:ZPR_2100 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; PRIAM: Glucose-1-phosphate thymidylyltransferase; SPTR: Glucose-1-phosphate thymidylyltransferase; TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; glucose-1-phosphate thymidylyltransferase 1486663 11054180 Murru_1356 Muricauda ruestringensis DSM 13258 glucose-1-phosphate thymidylyltransferase YP_004787820.1 1485794 D 886377 CDS YP_004787821.1 344202678 11054181 1486660..1487208 1 NC_015945.1 PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase; InterPro IPR000888; KEGG: fps:FP2479 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase-related; PRIAM: dTDP-4-dehydrorhamnose 3,5-epimerase; SPTR: DTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase-related; dTDP-4-dehydrorhamnose 3,5-epimerase 1487208 11054181 Murru_1357 Muricauda ruestringensis DSM 13258 dTDP-4-dehydrorhamnose 3,5-epimerase YP_004787821.1 1486660 D 886377 CDS YP_004787822.1 344202679 11054182 1487220..1488032 1 NC_015945.1 PFAM: Potyvirus P1 protease; Inositol monophosphatase family; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, bacterial; COGs: COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; InterPro IPR000760:IPR006240; KEGG: fbc:FB2170_04590 CysQ, sulfite synthesis pathway protein; PFAM: Inositol monophosphatase; SPTR: CysQ, sulfite synthesis pathway protein; TIGRFAM: 3(2),5 -bisphosphate nucleotidase, bacterial; 3'(2'),5'-bisphosphate nucleotidase 1488032 11054182 Murru_1358 Muricauda ruestringensis DSM 13258 3'(2'),5'-bisphosphate nucleotidase YP_004787822.1 1487220 D 886377 CDS YP_004787823.1 344202680 11054183 1488033..1488467 1 NC_015945.1 PFAM: Predicted membrane protein (DUF2061); InterPro IPR018638; KEGG: rbi:RB2501_13309 hypothetical protein; PFAM: Protein of unknown function DUF2061, membrane; SPTR: Putative uncharacterized protein; hypothetical protein 1488467 11054183 Murru_1359 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787823.1 1488033 D 886377 CDS YP_004787824.1 344202681 11054184 1488449..1489039 1 NC_015945.1 PFAM: Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK); COGs: COG0529 Adenylylsulfate kinase and related kinase; HAMAP: Adenylylsulphate kinase, C-terminal; InterPro IPR002891; KEGG: fbc:FB2170_04595 adenylylsulfate kinase; PFAM: Adenylylsulphate kinase, C-terminal; PRIAM: Adenylyl-sulfate kinase; SPTR: Adenylyl-sulfate kinase; TIGRFAM: Adenylylsulphate kinase, C-terminal; adenylylsulfate kinase 1489039 11054184 Murru_1360 Muricauda ruestringensis DSM 13258 adenylylsulfate kinase YP_004787824.1 1488449 D 886377 CDS YP_004787825.1 344202682 11054185 1489039..1489944 1 NC_015945.1 PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit; COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR002500:IPR011784; KEGG: rbi:RB2501_13299 sulfate adenylyltransferase subunit 2; PFAM: Phosphoadenosine phosphosulphate reductase; PRIAM: Sulfate adenylyltransferase; SPTR: Sulfate adenylyltransferase subunit 2; TIGRFAM: Sulphate adenylyltransferase, small subunit; sulfate adenylyltransferase 1489944 11054185 Murru_1361 Muricauda ruestringensis DSM 13258 sulfate adenylyltransferase YP_004787825.1 1489039 D 886377 CDS YP_004787826.1 344202683 11054186 1489952..1491205 1 NC_015945.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain; COGs: COG2895 GTPase - Sulfate adenylate transferase subunit 1; InterPro IPR000795:IPR004161:IPR011779; KEGG: fbc:FB2170_04605 sulfate adenylyltransferase large subunit; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; PRIAM: Sulfate adenylyltransferase; SPTR: Sulfate adenylyltransferase, large subunit; TIGRFAM: Sulphate adenylyltransferase, large subunit; sulfate adenylyltransferase 1491205 11054186 Murru_1362 Muricauda ruestringensis DSM 13258 sulfate adenylyltransferase YP_004787826.1 1489952 D 886377 CDS YP_004787827.1 344202684 11054188 1492695..1494149 1 NC_015945.1 KEGG: cbi:CLJ_B3312 hypothetical protein; SPTR: ABC transporter ATP-binding protein; hypothetical protein 1494149 11054188 Murru_1364 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787827.1 1492695 D 886377 CDS YP_004787828.1 344202685 11054189 1494343..1495590 1 NC_015945.1 PFAM: Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: pdi:BDI_1414 putative O-antigen transporter; PFAM: Polysaccharide biosynthesis protein; SPTR: RfbX protein; manually curated; polysaccharide biosynthesis protein 1495590 11054189 Murru_1365 Muricauda ruestringensis DSM 13258 polysaccharide biosynthesis protein YP_004787828.1 1494343 D 886377 CDS YP_004787829.1 344202686 11054190 1495590..1496024 1 NC_015945.1 COGs: COG1045 Serine acetyltransferase; InterPro IPR001451; KEGG: cpo:COPRO5265_0054 serine acetyltransferase (SAT); PFAM: Bacterial transferase hexapeptide repeat; SPTR: Serine acetyltransferase; transferase 1496024 11054190 Murru_1366 Muricauda ruestringensis DSM 13258 transferase YP_004787829.1 1495590 D 886377 CDS YP_004787830.1 344202687 11054191 1496021..1496941 1 NC_015945.1 PFAM: Sulfotransferase domain; InterPro IPR000863; KEGG: mif:Metin_0222 sulfotransferase; PFAM: Sulfotransferase domain; SPTR: Sulfotransferase; sulfotransferase 1496941 11054191 Murru_1367 Muricauda ruestringensis DSM 13258 sulfotransferase YP_004787830.1 1496021 D 886377 CDS YP_004787831.1 344202688 11054192 1496957..1498321 1 NC_015945.1 PFAM: O-Antigen ligase; InterPro IPR007016; KEGG: cno:NT01CX_1531 hypothetical protein; PFAM: O-antigen ligase-related; SPTR: Putative uncharacterized protein; O-antigen polymerase 1498321 11054192 Murru_1368 Muricauda ruestringensis DSM 13258 O-antigen polymerase YP_004787831.1 1496957 D 886377 CDS YP_004787832.1 344202689 11054193 1498305..1499135 1 NC_015945.1 PFAM: Glycosyl transferase family 2; InterPro IPR001173; KEGG: ckn:Calkro_0047 glycosyl transferase family 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2; family 2 glycosyl transferase 1499135 11054193 Murru_1369 Muricauda ruestringensis DSM 13258 family 2 glycosyl transferase YP_004787832.1 1498305 D 886377 CDS YP_004787833.1 344202690 11054194 1499128..1500360 1 NC_015945.1 PFAM: O-Antigen ligase; KEGG: fjo:Fjoh_1031 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1500360 11054194 Murru_1370 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787833.1 1499128 D 886377 CDS YP_004787834.1 344202691 11054195 complement(1500342..1501418) 1 NC_015945.1 PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cno:NT01CX_1528 glycosyl transferase, group 1 family protein, putative; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1; group 1 glycosyl transferase 1501418 11054195 Murru_1371 Muricauda ruestringensis DSM 13258 group 1 glycosyl transferase YP_004787834.1 1500342 R 886377 CDS YP_004787835.1 344202692 11054196 1501540..1502892 1 NC_015945.1 PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR017475; KEGG: fbc:FB2170_05740 glycosyltransferase; PFAM: Bacterial sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Glycosyltransferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 1502892 11054196 Murru_1372 Muricauda ruestringensis DSM 13258 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_004787835.1 1501540 D 886377 CDS YP_004787836.1 344202693 11054197 1502991..1503977 1 NC_015945.1 PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: fbc:FB2170_05735 UDP-glucuronate decarboxylase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: UDP-glucuronate decarboxylase; SPTR: UDP-glucuronate decarboxylase; UDP-glucuronate decarboxylase 1503977 11054197 Murru_1373 Muricauda ruestringensis DSM 13258 UDP-glucuronate decarboxylase YP_004787836.1 1502991 D 886377 CDS YP_004787837.1 344202694 11054198 1504186..1505457 1 NC_015945.1 PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; COGs: COG0151 Phosphoribosylamine-glycine ligase; HAMAP: Phosphoribosylglycinamide synthetase; InterPro IPR000115:IPR020562:IPR020561:IPR020560; KEGG: fbc:FB2170_05730 putative phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; PRIAM: Phosphoribosylamine--glycine ligase; SPTR: Phosphoglycerate kinase; TIGRFAM: Phosphoribosylglycinamide synthetase; phosphoribosylamine--glycine ligase 1505457 11054198 Murru_1374 Muricauda ruestringensis DSM 13258 phosphoribosylamine--glycine ligase YP_004787837.1 1504186 D 886377 CDS YP_004787838.1 344202695 11054199 complement(1505452..1505673) 1 NC_015945.1 KEGG: rbi:RB2501_06645 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1505673 11054199 Murru_1375 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787838.1 1505452 R 886377 CDS YP_004787839.1 344202696 11054200 1505713..1506642 1 NC_015945.1 KEGG: fbc:FB2170_05720 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1506642 11054200 Murru_1376 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787839.1 1505713 D 886377 CDS YP_004787840.1 344202697 11054201 1506685..1507290 1 NC_015945.1 KEGG: fbc:FB2170_05715 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1507290 11054201 Murru_1377 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787840.1 1506685 D 886377 CDS YP_004787841.1 344202698 11054202 1507274..1508335 1 NC_015945.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: fbc:FB2170_05710 heptosyltransferase; PFAM: Glycosyl transferase, family 9; SPTR: Heptosyltransferase; glycosyl transferase family protein 1508335 11054202 Murru_1378 Muricauda ruestringensis DSM 13258 glycosyl transferase family protein YP_004787841.1 1507274 D 886377 CDS YP_004787842.1 344202699 11054203 1508455..1509282 1 NC_015945.1 hypothetical protein 1509282 11054203 Murru_1379 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787842.1 1508455 D 886377 CDS YP_004787843.1 344202700 11054204 1509300..1509917 1 NC_015945.1 hypothetical protein 1509917 11054204 Murru_1380 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787843.1 1509300 D 886377 CDS YP_004787844.1 344202701 11054205 complement(1509943..1511031) 1 NC_015945.1 PFAM: Radical SAM superfamily; Protein of unknown function (DUF3641); COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: fbc:FB2170_05700 hypothetical protein; PFAM: Radical SAM; SPTR: Putative uncharacterized protein; radical SAM protein 1511031 11054205 Murru_1381 Muricauda ruestringensis DSM 13258 radical SAM protein YP_004787844.1 1509943 R 886377 CDS YP_004787845.1 344202702 11054206 complement(1511046..1511381) 1 NC_015945.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain; InterPro IPR003779:IPR004675; KEGG: fbc:FB2170_05695 carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase; SPTR: Carboxymuconolactone decarboxylase; TIGRFAM: Alkylhydroperoxidase AhpD core; alkylhydroperoxidase 1511381 11054206 Murru_1382 Muricauda ruestringensis DSM 13258 alkylhydroperoxidase YP_004787845.1 1511046 R 886377 CDS YP_004787846.1 344202703 11054207 complement(1511695..1512255) 1 NC_015945.1 PFAM: Fasciclin domain; COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: rbi:RB2501_10307 hypothetical protein; PFAM: FAS1 domain; SMART: FAS1 domain; SPTR: Putative uncharacterized protein; beta-Ig-H3/fasciclin 1512255 11054207 Murru_1383 Muricauda ruestringensis DSM 13258 beta-Ig-H3/fasciclin YP_004787846.1 1511695 R 886377 CDS YP_004787847.1 344202704 11054208 1512414..1513187 1 NC_015945.1 PFAM: Patatin-like phospholipase; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: rbi:RB2501_06605 hypothetical protein; PFAM: Patatin/Phospholipase A2-related; SPTR: Putative uncharacterized protein; patatin 1513187 11054208 Murru_1384 Muricauda ruestringensis DSM 13258 patatin YP_004787847.1 1512414 D 886377 CDS YP_004787848.1 344202705 11054209 complement(1513200..1514246) 1 NC_015945.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterPro IPR008333:IPR001433:IPR001041; KEGG: fbc:FB2170_05685 phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: Ferredoxin; Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding; SPTR: Phenylacetate-CoA oxygenase/reductase, PaaK subunit; ferredoxin 1514246 11054209 Murru_1385 Muricauda ruestringensis DSM 13258 ferredoxin YP_004787848.1 1513200 R 886377 CDS YP_004787849.1 344202706 11054210 1514367..1515836 1 NC_015945.1 KEGG: rbi:RB2501_06595 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1515836 11054210 Murru_1386 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787849.1 1514367 D 886377 CDS YP_004787850.1 344202707 11054211 1515857..1516552 1 NC_015945.1 PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_05660 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative ATP-binding component of ABC transporter protein; ABC transporter-like protein 1516552 11054211 Murru_1387 Muricauda ruestringensis DSM 13258 ABC transporter-like protein YP_004787850.1 1515857 D 886377 CDS YP_004787851.1 344202708 11054212 1516684..1519185 1 NC_015945.1 KEGG: fbc:FB2170_05655 TPR domain-containing protein; SPTR: TPR domain protein; hypothetical protein 1519185 11054212 Murru_1388 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787851.1 1516684 D 886377 CDS YP_004787852.1 344202709 11054213 1519207..1519626 1 NC_015945.1 PFAM: Protein of unknown function, DUF583; COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: fbc:FB2170_05650 hypothetical protein; PFAM: Protein of unknown function DUF583; SPTR: Putative uncharacterized protein; hypothetical protein 1519626 11054213 Murru_1389 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787852.1 1519207 D 886377 CDS YP_004787853.1 344202710 11054214 1519604..1519831 1 NC_015945.1 KEGG: mtt:Ftrac_2565 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1519831 11054214 Murru_1390 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787853.1 1519604 D 886377 CDS YP_004787854.1 344202711 11054215 1519828..1520217 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 1520217 11054215 Murru_1391 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787854.1 1519828 D 886377 CDS YP_004787855.1 344202712 11054216 1520300..1521469 1 NC_015945.1 PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); COGs: COG0356 F0F1-type ATP synthase subunit a; HAMAP: ATPase, F0 complex, subunit A; InterPro IPR000568; KEGG: mtt:Ftrac_2567 ATP synthase f0 subcomplex A subunit; PFAM: ATPase, F0 complex, subunit A; SPTR: ATP synthase subunit a; TIGRFAM: ATPase, F0 complex, subunit A; ATP synthase subunit a 1521469 11054216 Murru_1392 Muricauda ruestringensis DSM 13258 ATP synthase subunit a YP_004787855.1 1520300 D 886377 CDS YP_004787856.1 344202713 11054217 1521505..1521699 1 NC_015945.1 PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c; HAMAP: ATPase, F0 complex, subunit C; InterPro IPR000454:IPR002379; KEGG: fjo:Fjoh_1056 H+-transporting two-sector ATPase, C subunit; PFAM: ATPase, F0/V0 complex, subunit C; SPTR: Putative uncharacterized protein; ATP synthase subunit c 1521699 11054217 Murru_1393 Muricauda ruestringensis DSM 13258 ATP synthase subunit c YP_004787856.1 1521505 D 886377 CDS YP_004787857.1 344202714 11054218 1521777..1522277 1 NC_015945.1 PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b; COGs: COG0711 F0F1-type ATP synthase subunit b; HAMAP: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; InterPro IPR002146:IPR005864; KEGG: fbc:FB2170_05620 ATP synthase F0 subunit B; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; SPTR: ATP synthase subunit b; TIGRFAM: ATPase, F0 complex, subunit B, bacterial; ATP synthase subunit b 1522277 11054218 Murru_1394 Muricauda ruestringensis DSM 13258 ATP synthase subunit b YP_004787857.1 1521777 D 886377 CDS YP_004787858.1 344202715 11054219 1522282..1522821 1 NC_015945.1 PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit; COGs: COG0712 F0F1-type ATP synthase delta subunit (mitochondrial oligomycin sensitivity protein); HAMAP: ATPase, F1 complex, OSCP/delta subunit; InterPro IPR000711; KEGG: fbc:FB2170_05615 ATP synthase subunit D; PFAM: ATPase, F1 complex, OSCP/delta subunit; SPTR: ATP synthase subunit D; TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; ATP synthase subunit delta 1522821 11054219 Murru_1395 Muricauda ruestringensis DSM 13258 ATP synthase subunit delta YP_004787858.1 1522282 D 886377 CDS YP_004787859.1 344202716 11054220 1522824..1524404 1 NC_015945.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit; COGs: COG0056 F0F1-type ATP synthase alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; InterPro IPR005294:IPR004100:IPR000194:IPR000793; KEGG: rbi:RB2501_06545 F0F1 ATP synthase subunit alpha; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; SPTR: ATP synthase subunit alpha; TIGRFAM: ATPase, F1 complex, alpha subunit; ATP synthase subunit alpha 1524404 11054220 Murru_1396 Muricauda ruestringensis DSM 13258 ATP synthase subunit alpha YP_004787859.1 1522824 D 886377 CDS YP_004787860.1 344202717 11054221 1524422..1524760 1 NC_015945.1 PFAM: S23 ribosomal protein; TIGRFAM: TIGR02436 family protein; InterPro IPR012657; KEGG: nam:NAMH_1650 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02436; hypothetical protein 1524760 11054221 Murru_1397 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787860.1 1524422 D 886377 CDS YP_004787861.1 344202718 11054222 1524791..1525651 1 NC_015945.1 PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit; COGs: COG0224 F0F1-type ATP synthase gamma subunit; HAMAP: ATPase, F1 complex, gamma subunit; InterPro IPR000131; KEGG: rbi:RB2501_06540 ATP synthase F1 subunit gamma; PFAM: ATPase, F1 complex, gamma subunit; SPTR: ATP synthase gamma chain; TIGRFAM: ATPase, F1 complex, gamma subunit; ATP synthase subunit gamma 1525651 11054222 Murru_1398 Muricauda ruestringensis DSM 13258 ATP synthase subunit gamma YP_004787861.1 1524791 D 886377 CDS YP_004787862.1 344202719 11054223 1525789..1527252 1 NC_015945.1 PFAM: Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: rbi:RB2501_06530 polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 1527252 11054223 Murru_1399 Muricauda ruestringensis DSM 13258 polysaccharide biosynthesis protein YP_004787862.1 1525789 D 886377 CDS YP_004787863.1 344202720 11054224 1527242..1527676 1 NC_015945.1 PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut); COGs: COG0756 dUTPase; HAMAP: DeoxyUTP pyrophosphatase; InterPro IPR008181:IPR008180; KEGG: cat:CA2559_03550 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: DeoxyUTP pyrophosphatase domain; PRIAM: dUTP diphosphatase; SPTR: Deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: DeoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase 1527676 11054224 Murru_1400 Muricauda ruestringensis DSM 13258 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_004787863.1 1527242 D 886377 CDS YP_004787864.1 344202721 11054225 1527764..1528780 1 NC_015945.1 PFAM: Nucleotidyl transferase; COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005835; KEGG: fjo:Fjoh_1064 nucleotidyl transferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate thymidyltransferase; manually curated; nucleotidyltransferase 1528780 11054225 Murru_1401 Muricauda ruestringensis DSM 13258 nucleotidyltransferase YP_004787864.1 1527764 D 886377 CDS YP_004787865.1 344202722 11054226 1528850..1529746 1 NC_015945.1 KEGG: rbi:RB2501_06520 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1529746 11054226 Murru_1402 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787865.1 1528850 D 886377 CDS YP_004787866.1 344202723 11054227 1529746..1530525 1 NC_015945.1 KEGG: fbc:FB2170_05585 deoxyuridine 5'-triphosphate nucleotidohydrolase; SPTR: Deoxyuridine 5'-triphosphate nucleotidohydrolase; deoxyuridine 5'-triphosphate nucleotidohydrolase 1530525 11054227 Murru_1403 Muricauda ruestringensis DSM 13258 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_004787866.1 1529746 D 886377 CDS YP_004787867.1 344202724 11054228 1530527..1531753 1 NC_015945.1 PFAM: Peptidase family M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: fbc:FB2170_05580 putative peptidase; PFAM: Peptidase M23; SPTR: Putative peptidase; peptidase M23 1531753 11054228 Murru_1404 Muricauda ruestringensis DSM 13258 peptidase M23 YP_004787867.1 1530527 D 886377 CDS YP_004787868.1 344202725 11054229 1531758..1532594 1 NC_015945.1 PFAM: Aldo/keto reductase family; COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR023210; KEGG: fbc:FB2170_05575 aldo/keto reductase family oxidoreductase; PFAM: NADP-dependent oxidoreductase domain; PRIAM: Methylglyoxal reductase (NADPH-dependent); SPTR: Oxidoreductase, aldo/keto reductase family protein; methylglyoxal reductase 1532594 11054229 Murru_1405 Muricauda ruestringensis DSM 13258 methylglyoxal reductase YP_004787868.1 1531758 D 886377 CDS YP_004787869.1 344202726 11054230 complement(1532598..1533110) 1 NC_015945.1 PFAM: Thioesterase superfamily; COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: fbc:FB2170_05570 thioesterase domain-containing protein; PFAM: Thioesterase superfamily; SPTR: Thioesterase superfamily protein; thioesterase superfamily protein 1533110 11054230 Murru_1406 Muricauda ruestringensis DSM 13258 thioesterase superfamily protein YP_004787869.1 1532598 R 886377 CDS YP_004787870.1 344202727 11054231 complement(1533172..1534116) 1 NC_015945.1 PFAM: Sporulation related domain; InterPro IPR007730; KEGG: fbc:FB2170_05560 hypothetical protein; PFAM: Sporulation-related domain; SPTR: Putative uncharacterized protein; manually curated; sporulation domain-containing protein 1534116 11054231 Murru_1407 Muricauda ruestringensis DSM 13258 sporulation domain-containing protein YP_004787870.1 1533172 R 886377 CDS YP_004787871.1 344202728 11054232 1534222..1535328 1 NC_015945.1 PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA; COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488; KEGG: gfo:GFO_3252 smf family protein; PFAM: DNA recombination-mediator protein A; SPTR: DNA processing protein; TIGRFAM: DNA recombination-mediator protein A; DNA protecting protein DprA 1535328 11054232 Murru_1408 Muricauda ruestringensis DSM 13258 DNA protecting protein DprA YP_004787871.1 1534222 D 886377 CDS YP_004787872.1 344202729 11054233 complement(1535416..1536555) 1 NC_015945.1 PFAM: SPFH domain / Band 7 family; COGs: COG4260 Putative virion core protein (lumpy skin disease virus); KEGG: fbc:FB2170_06775 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1536555 11054233 Murru_1409 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787872.1 1535416 R 886377 CDS YP_004787873.1 344202730 11054234 complement(1536659..1537786) 1 NC_015945.1 PFAM: Peptidase family S58; COGs: COG3191 L-aminopeptidase/D-esterase; InterPro IPR005321; KEGG: fbc:FB2170_11636 peptidase family T4; PFAM: Peptidase S58, DmpA; SPTR: Peptidase family T4; peptidase S58 DmpA 1537786 11054234 Murru_1410 Muricauda ruestringensis DSM 13258 peptidase S58 DmpA YP_004787873.1 1536659 R 886377 CDS YP_004787874.1 344202731 11054235 complement(1537797..1538300) 1 NC_015945.1 KEGG: zpr:ZPR_3644 putative metal-dependent hydrolase; SPTR: Putative uncharacterized protein; putative metal-dependent hydrolase 1538300 11054235 Murru_1411 Muricauda ruestringensis DSM 13258 putative metal-dependent hydrolase YP_004787874.1 1537797 R 886377 CDS YP_004787875.1 344202732 11054236 complement(1538316..1539740) 1 NC_015945.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: fbc:FB2170_09286 hypothetical protein; PFAM: Oxidoreductase, N-terminal; SPTR: Putative uncharacterized protein; oxidoreductase domain-containing protein 1539740 11054236 Murru_1412 Muricauda ruestringensis DSM 13258 oxidoreductase domain-containing protein YP_004787875.1 1538316 R 886377 CDS YP_004787876.1 344202733 11054237 complement(1539750..1540541) 1 NC_015945.1 PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: rbi:RB2501_06280 putative secreted glycosyl hydrolase; PFAM: Protein of unknown function DUF1080; SPTR: Probable secreted glycosyl hydrolase; hypothetical protein 1540541 11054237 Murru_1413 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787876.1 1539750 R 886377 CDS YP_004787877.1 344202734 11054238 1540649..1543783 1 NC_015945.1 PFAM: BNR/Asp-box repeat; InterPro IPR002860; KEGG: rbi:RB2501_06335 hypothetical protein; PFAM: BNR repeat; SPTR: Putative uncharacterized protein; glycosyl hydrolase family protein 1543783 11054238 Murru_1414 Muricauda ruestringensis DSM 13258 glycosyl hydrolase family protein YP_004787877.1 1540649 D 886377 CDS YP_004787878.1 344202735 11054239 1543970..1547095 1 NC_015945.1 PFAM: BNR/Asp-box repeat; InterPro IPR002860; KEGG: fbc:FB2170_05110 hypothetical protein; PFAM: BNR repeat; SPTR: Putative uncharacterized protein; glycosyl hydrolase family protein 1547095 11054239 Murru_1415 Muricauda ruestringensis DSM 13258 glycosyl hydrolase family protein YP_004787878.1 1543970 D 886377 CDS YP_004787879.1 344202736 11054240 1547114..1547659 1 NC_015945.1 PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: TIGR00701 family protein; COGs: COG1981 membrane protein; InterPro IPR005265; KEGG: fbc:FB2170_05100 hypothetical protein; PFAM: Uncharacterised protein family UPF0093; SPTR: Putative uncharacterized protein; hypothetical protein 1547659 11054240 Murru_1416 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787879.1 1547114 D 886377 CDS YP_004787880.1 344202737 11054241 1547748..1548236 1 NC_015945.1 PFAM: DNA mismatch endonuclease Vsr; Protein of unknown function (DUF559); TIGRFAM: DNA mismatch endonuclease Vsr; COGs: COG3727 DNA G:T-mismatch repair endonuclease; InterPro IPR004603:IPR007569; KEGG: fbc:FB2170_05415 putative very-short-patch-repair endonuclease; PFAM: DNA mismatch endonuclease vsr; Domain of unknown function DUF559; SPTR: Putative very-short-patch-repair endonuclease; TIGRFAM: DNA mismatch endonuclease vsr; DNA mismatch endonuclease Vsr 1548236 11054241 Murru_1417 Muricauda ruestringensis DSM 13258 DNA mismatch endonuclease Vsr YP_004787880.1 1547748 D 886377 CDS YP_004787881.1 344202738 11054242 complement(1548211..1548915) 1 NC_015945.1 PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: sss:SSUSC84_1375 putative DNA-binding phage protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative phage repressor; helix-turn-helix domain-containing protein 1548915 11054242 Murru_1418 Muricauda ruestringensis DSM 13258 helix-turn-helix domain-containing protein YP_004787881.1 1548211 R 886377 CDS YP_004787882.1 344202739 11054243 1549056..1549376 1 NC_015945.1 hypothetical protein 1549376 11054243 Murru_1419 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787882.1 1549056 D 886377 CDS YP_004787883.1 344202740 11054244 complement(1549362..1549880) 1 NC_015945.1 PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: fbc:FB2170_05445 transcriptional regulator; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Transcriptional regulator; N-acetyltransferase GCN5 1549880 11054244 Murru_1420 Muricauda ruestringensis DSM 13258 N-acetyltransferase GCN5 YP_004787883.1 1549362 R 886377 CDS YP_004787884.1 344202741 11054245 complement(1549966..1550070) 1 NC_015945.1 hypothetical protein 1550070 11054245 Murru_1421 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787884.1 1549966 R 886377 CDS YP_004787885.1 344202742 11054246 complement(1550202..1550855) 1 NC_015945.1 PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; COGs: COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit; InterPro IPR004165:IPR012791; KEGG: gfo:GFO_3238 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B; PFAM: Coenzyme A transferase; PRIAM: 3-oxoacid CoA-transferase; SMART: Coenzyme A transferase; SPTR: Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B; TIGRFAM: 3-oxoacid CoA-transferase, subunit B; 3-oxoacid CoA-transferase subunit B 1550855 11054246 Murru_1422 Muricauda ruestringensis DSM 13258 3-oxoacid CoA-transferase subunit B YP_004787885.1 1550202 R 886377 CDS YP_004787886.1 344202743 11054247 complement(1550855..1551196) 1 NC_015945.1 KEGG: fbc:FB2170_05460 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1551196 11054247 Murru_1423 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787886.1 1550855 R 886377 CDS YP_004787887.1 344202744 11054248 complement(1551193..1551894) 1 NC_015945.1 PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; COGs: COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase alpha subunit; InterPro IPR004165:IPR012792; KEGG: fbc:FB2170_05465 3-oxoacid CoA-transferase subunit A; PFAM: Coenzyme A transferase; PRIAM: 3-oxoacid CoA-transferase; SMART: Coenzyme A transferase; SPTR: 3-oxoacid CoA-transferase subunit A; TIGRFAM: 3-oxoacid CoA-transferase, subunit A; 3-oxoacid CoA-transferase subunit A 1551894 11054248 Murru_1424 Muricauda ruestringensis DSM 13258 3-oxoacid CoA-transferase subunit A YP_004787887.1 1551193 R 886377 CDS YP_004787888.1 344202745 11054249 complement(1551995..1554325) 1 NC_015945.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; COGs: COG5009 Membrane carboxypeptidase/penicillin-binding protein; InterPro IPR001264:IPR001460; KEGG: rbi:RB2501_06430 penicillin-binding protein 1A (PBP-1a); PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Penicillin-binding protein 1A (PBP-1a); peptidoglycan glycosyltransferase 1554325 11054249 Murru_1425 Muricauda ruestringensis DSM 13258 peptidoglycan glycosyltransferase YP_004787888.1 1551995 R 886377 CDS YP_004787889.1 344202746 11054250 complement(1554325..1554816) 1 NC_015945.1 TIGRFAM: gliding motility-associated lipoprotein GldH; InterPro IPR020018; KEGG: zpr:ZPR_0091 gliding motility lipoprotein GldH-like protein; SPTR: Gliding motility lipoprotein gldH-like protein; TIGRFAM: Gliding motility-associated lipoprotein, GldH; gliding motility-associated lipoprotein GldH 1554816 11054250 Murru_1426 Muricauda ruestringensis DSM 13258 gliding motility-associated lipoprotein GldH YP_004787889.1 1554325 R 886377 CDS YP_004787890.1 344202747 11054251 complement(1554806..1555963) 1 NC_015945.1 PFAM: PSP1 C-terminal conserved region; COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557; KEGG: zpr:ZPR_0090 PSP1 domain-containing protein; PFAM: PSP1, C-terminal; SPTR: PSP1 domain protein; PSP1 domain-containing protein 1555963 11054251 Murru_1427 Muricauda ruestringensis DSM 13258 PSP1 domain-containing protein YP_004787890.1 1554806 R 886377 CDS YP_004787891.1 344202748 11054252 complement(1556169..1557200) 1 NC_015945.1 PFAM: Rhodanese-like domain; COGs: COG1054 sulfurtransferase; HAMAP: Uncharacterised protein family UPF0176; InterPro IPR020936:IPR001763; KEGG: fbc:FB2170_05490 hypothetical protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: UPF0176 protein FB2170_05490; hypothetical protein 1557200 11054252 Murru_1428 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787891.1 1556169 R 886377 CDS YP_004787892.1 344202749 11054253 1557476..1558483 1 NC_015945.1 PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA; COGs: COG0468 RecA/RadA recombinase; HAMAP: DNA recombination and repair protein RecA; InterPro IPR013765:IPR003593; KEGG: fbc:FB2170_05505 recombinase A; PFAM: DNA recombination and repair protein RecA; SMART: ATPase, AAA+ type, core; SPTR: Protein recA; TIGRFAM: DNA recombination and repair protein RecA; protein recA 1558483 11054253 Murru_1429 Muricauda ruestringensis DSM 13258 protein recA YP_004787892.1 1557476 D 886377 CDS YP_004787893.1 344202750 11054254 1558584..1559024 1 NC_015945.1 KEGG: fbc:FB2170_05510 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1559024 11054254 Murru_1430 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787893.1 1558584 D 886377 CDS YP_004787894.1 344202751 11054255 1559054..1559584 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: rbi:RB2501_06465 putative RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: Putative RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 1559584 11054255 Murru_1431 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004787894.1 1559054 D 886377 CDS YP_004787895.1 344202752 11054256 1559597..1561048 1 NC_015945.1 KEGG: rbi:RB2501_06470 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1561048 11054256 Murru_1432 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787895.1 1559597 D 886377 CDS YP_004787896.1 344202753 11054257 1561122..1562357 1 NC_015945.1 PFAM: Histidine kinase; GAF domain; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR003018:IPR010559; KEGG: dfe:Dfer_1503 putative phytochrome sensor protein; PFAM: Signal transduction histidine kinase, internal region; GAF; SMART: GAF; SPTR: Putative orphan protein ; putative GGDEF protein; putative signal transduction histidine kinase 1562357 11054257 Murru_1433 Muricauda ruestringensis DSM 13258 putative signal transduction histidine kinase YP_004787896.1 1561122 D 886377 CDS YP_004787897.1 344202754 11054258 1562361..1564211 1 NC_015945.1 PFAM: Histidine kinase; 7TM diverse intracellular signalling; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: cpi:Cpin_1400 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Possible sensor protein; putative signal transduction histidine kinase 1564211 11054258 Murru_1434 Muricauda ruestringensis DSM 13258 putative signal transduction histidine kinase YP_004787897.1 1562361 D 886377 CDS YP_004787898.1 344202755 11054259 complement(1564217..1564954) 1 NC_015945.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: fbc:FB2170_05530 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase; phospholipid/glycerol acyltransferase 1564954 11054259 Murru_1435 Muricauda ruestringensis DSM 13258 phospholipid/glycerol acyltransferase YP_004787898.1 1564217 R 886377 CDS YP_004787899.1 344202756 11054260 1565012..1565254 1 NC_015945.1 PFAM: Transglycosylase associated protein; InterPro IPR007341; KEGG: lby:Lbys_3051 transglycosylase-associated protein; PFAM: Transglycosylase-associated protein; SPTR: Putative membrane protein; transglycosylase 1565254 11054260 Murru_1436 Muricauda ruestringensis DSM 13258 transglycosylase YP_004787899.1 1565012 D 886377 CDS YP_004787900.1 344202757 11054261 1565342..1566310 1 NC_015945.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; COGs: COG0180 Tryptophanyl-tRNA synthetase; InterPro IPR002305:IPR002306; KEGG: fbc:FB2170_05535 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; PRIAM: Tryptophan--tRNA ligase; SPTR: Tryptophanyl-tRNA synthetase; TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; tryptophanyl-tRNA synthetase 1566310 11054261 Murru_1437 Muricauda ruestringensis DSM 13258 tryptophanyl-tRNA synthetase YP_004787900.1 1565342 D 886377 CDS YP_004787901.1 344202758 11054262 complement(1566609..1567682) 1 NC_015945.1 PFAM: Radical SAM superfamily; COGs: COG1533 DNA repair photolyase; InterPro IPR006638:IPR007197; KEGG: fbc:FB2170_05080 radical SAM; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein; radical SAM protein 1567682 11054262 Murru_1438 Muricauda ruestringensis DSM 13258 radical SAM protein YP_004787901.1 1566609 R 886377 CDS YP_004787902.1 344202759 11054263 complement(1568662..1569624) 1 NC_015945.1 KEGG: pyo:PY00324 hypothetical protein; SPTR: Putative uncharacterized protein PY00324; hypothetical protein 1569624 11054263 Murru_1439 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787902.1 1568662 R 886377 CDS YP_004787903.1 344202760 11054264 complement(1570345..1571898) 1 NC_015945.1 KEGG: fbc:FB2170_05085 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1571898 11054264 Murru_1440 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787903.1 1570345 R 886377 CDS YP_004787904.1 344202761 11054265 complement(1571923..1572705) 1 NC_015945.1 PFAM: Enoyl-CoA hydratase/isomerase family; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: fbc:FB2170_05090 enoyl-CoA hydratase; PFAM: Crotonase, core; PRIAM: Enoyl-CoA hydratase; SPTR: Enoyl-CoA hydratase; enoyl-CoA hydratase 1572705 11054265 Murru_1441 Muricauda ruestringensis DSM 13258 enoyl-CoA hydratase YP_004787904.1 1571923 R 886377 CDS YP_004787905.1 344202762 11054266 complement(1572748..1574160) 1 NC_015945.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR003661:IPR003594:IPR003660; KEGG: rbi:RB2501_05875 sensory transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Sensory transduction histidine kinase; integral membrane sensor signal transduction histidine kinase 1574160 11054266 Murru_1442 Muricauda ruestringensis DSM 13258 integral membrane sensor signal transduction histidine kinase YP_004787905.1 1572748 R 886377 CDS YP_004787906.1 344202763 11054267 complement(1574668..1575414) 1 NC_015945.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR001041:IPR004489; KEGG: rbi:RB2501_06375 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; PFAM: Ferredoxin; SPTR: Succinate dehydrogenase; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein 1575414 11054267 Murru_1443 Muricauda ruestringensis DSM 13258 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_004787906.1 1574668 R 886377 CDS YP_004787907.1 344202764 11054268 complement(1575442..1575834) 1 NC_015945.1 PFAM: S23 ribosomal protein; InterPro IPR008815; KEGG: ppn:Palpr_1064 hypothetical protein; PFAM: 23S rRNA-associated protein; SPTR: Putative uncharacterized protein; S23 ribosomal protein 1575834 11054268 Murru_1444 Muricauda ruestringensis DSM 13258 S23 ribosomal protein YP_004787907.1 1575442 R 886377 CDS YP_004787908.1 344202765 11054269 complement(1575890..1577893) 1 NC_015945.1 PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR003953:IPR004112:IPR011280; KEGG: zpr:ZPR_0231 succinate dehydrogenase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; PRIAM: Succinate dehydrogenase; SPTR: Succinate dehydrogenase; TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, low-GC Gram-positive bacteria; succinate dehydrogenase or fumarate reductase, flavoprotein subunit 1577893 11054269 Murru_1445 Muricauda ruestringensis DSM 13258 succinate dehydrogenase or fumarate reductase, flavoprotein subunit YP_004787908.1 1575890 R 886377 CDS YP_004787909.1 344202766 11054270 complement(1577896..1578564) 1 NC_015945.1 TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; InterPro IPR011138; KEGG: rbi:RB2501_06365 succinate dehydrogenase, cytochrome b558 subunit; SPTR: Succinate dehydrogenase, cytochrome b558 subunit; TIGRFAM: Succinate dehydrogenase, cytochrome b558 subunit; succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 1578564 11054270 Murru_1446 Muricauda ruestringensis DSM 13258 succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family YP_004787909.1 1577896 R 886377 CDS YP_004787910.1 344202767 11054271 1578737..1579627 1 NC_015945.1 PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR013651:IPR004666; KEGG: fbc:FB2170_05395 ribosomal protein S6 modification protein; PFAM: ATP-grasp fold, RimK-type; SPTR: Ribosomal protein S6 modification protein; TIGRFAM: S6 modification enzyme RimK; RimK family alpha-L-glutamate ligase 1579627 11054271 Murru_1447 Muricauda ruestringensis DSM 13258 RimK family alpha-L-glutamate ligase YP_004787910.1 1578737 D 886377 CDS YP_004787911.1 344202768 11054272 complement(1579649..1580080) 1 NC_015945.1 KEGG: zpr:ZPR_3566 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1580080 11054272 Murru_1448 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787911.1 1579649 R 886377 CDS YP_004787912.1 344202769 11054273 complement(1580265..1580654) 1 NC_015945.1 PFAM: Protein of unknown function (DUF2721); KEGG: rbi:RB2501_06355 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1580654 11054273 Murru_1449 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787912.1 1580265 R 886377 CDS YP_004787913.1 344202770 11054274 1580734..1582026 1 NC_015945.1 PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase family M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR007865:IPR000994; KEGG: fbc:FB2170_05355 Xaa-Pro aminopeptidase; PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; SPTR: Xaa-Pro aminopeptidase; peptidase M24 1582026 11054274 Murru_1450 Muricauda ruestringensis DSM 13258 peptidase M24 YP_004787913.1 1580734 D 886377 CDS YP_004787914.1 344202771 11054275 1582032..1582208 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 1582208 11054275 Murru_1451 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787914.1 1582032 D 886377 CDS YP_004787915.1 344202772 11054276 1582280..1583374 1 NC_015945.1 PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: rbi:RB2501_10852 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase 1583374 11054276 Murru_1452 Muricauda ruestringensis DSM 13258 beta-lactamase YP_004787915.1 1582280 D 886377 CDS YP_004787916.1 344202773 11054277 1583598..1584245 1 NC_015945.1 PFAM: Cation efflux family; COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: ppn:Palpr_1037 cation efflux protein; PFAM: Cation efflux protein; SPTR: Putative uncharacterized protein; cation efflux protein 1584245 11054277 Murru_1453 Muricauda ruestringensis DSM 13258 cation efflux protein YP_004787916.1 1583598 D 886377 CDS YP_004787917.1 344202774 11054278 1584433..1585242 1 NC_015945.1 PFAM: Domain of unknown function (DUF1963); hypothetical protein 1585242 11054278 Murru_1454 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787917.1 1584433 D 886377 CDS YP_004787918.1 344202775 11054279 1585270..1585878 1 NC_015945.1 PFAM: Methyltransferase domain; InterPro IPR013217; KEGG: fbc:FB2170_01567 hypothetical protein; PFAM: Methyltransferase type 12; SPTR: Putative uncharacterized protein; type 12 methyltransferase 1585878 11054279 Murru_1455 Muricauda ruestringensis DSM 13258 type 12 methyltransferase YP_004787918.1 1585270 D 886377 CDS YP_004787919.1 344202776 11054280 complement(1585875..1587182) 1 NC_015945.1 PFAM: Branched-chain amino acid transport protein; TIGRFAM: branched-chain amino acid uptake carrier; COGs: COG1114 Branched-chain amino acid permease; InterPro IPR004685; KEGG: fbc:FB2170_05320 branched-chain amino acid transport system carrier protein; PFAM: Branched-chain amino acid transport system II carrier protein; SPTR: Branched-chain amino acid transport system carrier protein; TIGRFAM: Branched-chain amino acid transport system II carrier protein; branched-chain amino acid transport system II carrier protein 1587182 11054280 Murru_1456 Muricauda ruestringensis DSM 13258 branched-chain amino acid transport system II carrier protein YP_004787919.1 1585875 R 886377 CDS YP_004787920.1 344202777 11054281 1587426..1587680 1 NC_015945.1 KEGG: rbi:RB2501_05890 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1587680 11054281 Murru_1457 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787920.1 1587426 D 886377 CDS YP_004787921.1 344202778 11054282 complement(1587800..1588852) 1 NC_015945.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase; COGs: COG0611 Thiamine monophosphate kinase; InterPro IPR000728:IPR010918:IPR006283; KEGG: fbc:FB2170_05310 putative thiamine-monophosphate kinase; PFAM: AIR synthase-related protein; AIR synthase-related protein, C-terminal; PRIAM: Thiamine-phosphate kinase; SPTR: Putative thiamine-monophosphate kinase; TIGRFAM: Thiamine-monophosphate kinase; thiamine-monophosphate kinase 1588852 11054282 Murru_1458 Muricauda ruestringensis DSM 13258 thiamine-monophosphate kinase YP_004787921.1 1587800 R 886377 CDS YP_004787922.1 344202779 11054283 1589100..1589429 1 NC_015945.1 PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; COGs: COG0316 conserved hypothetical protein; InterPro IPR000361:IPR016092; KEGG: rbi:RB2501_05910 scaffold protein for iron-sulfur cluster assembly; PFAM: FeS cluster biogenesis; SPTR: Scaffold protein for iron-sulfur cluster assembly; TIGRFAM: FeS cluster insertion; iron-sulfur cluster assembly accessory protein 1589429 11054283 Murru_1459 Muricauda ruestringensis DSM 13258 iron-sulfur cluster assembly accessory protein YP_004787922.1 1589100 D 886377 CDS YP_004787923.1 344202780 11054284 1589470..1590915 1 NC_015945.1 PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825:IPR010231; KEGG: zpr:ZPR_0215 cysteine desulfurase activator complex subunit SufB; PFAM: SUF system FeS cluster assembly, SufBD; SPTR: Cysteine desulfurase activator complex subunit SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; FeS assembly protein SufB 1590915 11054284 Murru_1460 Muricauda ruestringensis DSM 13258 FeS assembly protein SufB YP_004787923.1 1589470 D 886377 CDS YP_004787924.1 344202781 11054285 1590952..1591701 1 NC_015945.1 PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC; COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR003593:IPR003439:IPR010230; KEGG: fps:FP2392 Fe-S assembly ATPase, SufC; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Fe-S assembly ATPase, SufC; TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; FeS assembly ATPase SufC 1591701 11054285 Murru_1461 Muricauda ruestringensis DSM 13258 FeS assembly ATPase SufC YP_004787924.1 1590952 D 886377 CDS YP_004787925.1 344202782 11054286 1591745..1592134 1 NC_015945.1 PFAM: S23 ribosomal protein; InterPro IPR008815; KEGG: zpr:ZPR_0216 S23 ribosomal protein; PFAM: 23S rRNA-associated protein; SPTR: S23 ribosomal protein; S23 ribosomal protein 1592134 11054286 Murru_1462 Muricauda ruestringensis DSM 13258 S23 ribosomal protein YP_004787925.1 1591745 D 886377 CDS YP_004787926.1 344202783 11054287 1592172..1593494 1 NC_015945.1 PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825:IPR011542; KEGG: fbc:FB2170_05275 FeS assembly protein SufD; PFAM: SUF system FeS cluster assembly, SufBD; SPTR: FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD; FeS assembly protein SufD 1593494 11054287 Murru_1463 Muricauda ruestringensis DSM 13258 FeS assembly protein SufD YP_004787926.1 1592172 D 886377 CDS YP_004787927.1 344202784 11054288 1593593..1594264 1 NC_015945.1 KEGG: zpr:ZPR_1870 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1594264 11054288 Murru_1464 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787927.1 1593593 D 886377 CDS YP_004787928.1 344202785 11054289 1594264..1595490 1 NC_015945.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192:IPR010970; KEGG: fbc:FB2170_05270 cysteine desulphurase SufS; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Selenocysteine lyase; SPTR: Cysteine desulfurase; TIGRFAM: Cysteine desulfurase, SufS; SufS subfamily cysteine desulfurase 1595490 11054289 Murru_1465 Muricauda ruestringensis DSM 13258 SufS subfamily cysteine desulfurase YP_004787928.1 1594264 D 886377 CDS YP_004787929.1 344202786 11054290 1595563..1595985 1 NC_015945.1 PFAM: Fe-S metabolism associated domain; COGs: COG2166 SufE protein probably involved in Fe-S center assembly; InterPro IPR003808; KEGG: fbc:FB2170_05265 hypothetical protein; PFAM: Fe-S metabolism associated SufE; SPTR: Putative uncharacterized protein; Fe-S metabolism associated SufE 1595985 11054290 Murru_1466 Muricauda ruestringensis DSM 13258 Fe-S metabolism associated SufE YP_004787929.1 1595563 D 886377 CDS YP_004787930.1 344202787 11054291 1595992..1596321 1 NC_015945.1 PFAM: Domain of unknown function DUF59; TIGRFAM: FeS assembly SUF system protein; COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR002744; KEGG: rbi:RB2501_05940 hypothetical protein; PFAM: Domain of unknown function DUF59; SPTR: Putative uncharacterized protein; hypothetical protein 1596321 11054291 Murru_1467 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787930.1 1595992 D 886377 CDS YP_004787931.1 344202788 11054292 1596582..1597091 1 NC_015945.1 PFAM: Protein of unknown function (DUF2480); InterPro IPR018914; KEGG: fbc:FB2170_05255 hypothetical protein; PFAM: Protein of unknown function DUF2480; SPTR: Putative uncharacterized protein; hypothetical protein 1597091 11054292 Murru_1468 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787931.1 1596582 D 886377 CDS YP_004787932.1 344202789 11054293 1597361..1598293 1 NC_015945.1 PFAM: Protein of unknown function (DUF3078); KEGG: rbi:RB2501_05950 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1598293 11054293 Murru_1469 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787932.1 1597361 D 886377 CDS YP_004787933.1 344202790 11054294 1598974..1601922 1 NC_015945.1 PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Bacterial regulatory helix-turn-helix proteins, AraC family; Tetratricopeptide repeat; COGs: COG0642 Signal transduction histidine kinase; InterProIPR019734:IPR003661:IPR003594:IPR001789:IPR 018060:IPR001440:IPR000005; KEGG: rbi:RB2501_14219 putative two-component system sensor kinase/response regulator fusion protein; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Tetratricopeptide TPR-1; Signal transduction response regulator, receiver domain; HTH transcriptional regulator, AraC; SMART: Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Tetratricopeptide repeat; Helix-turn-helix, AraC type, DNA binding domain; SPTR: Putative two-component system sensor kinase/response regulator fusion protein; ATP-binding protein 1601922 11054294 Murru_1470 Muricauda ruestringensis DSM 13258 ATP-binding protein YP_004787933.1 1598974 D 886377 CDS YP_004787934.1 344202791 11054295 1602068..1602640 1 NC_015945.1 KEGG: rbi:RB2501_14214 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1602640 11054295 Murru_1471 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787934.1 1602068 D 886377 CDS YP_004787935.1 344202792 11054296 1602689..1603402 1 NC_015945.1 KEGG: kol:Kole_0169 fibronectin type III domain protein; SPTR: Fibronectin type III domain protein; hypothetical protein 1603402 11054296 Murru_1472 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787935.1 1602689 D 886377 CDS YP_004787936.1 344202793 11054297 complement(1603431..1604642) 1 NC_015945.1 PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain; COGs: COG2262 GTPase; InterPro IPR002917:IPR016496:IPR005225; KEGG: fbc:FB2170_05245 GTP-binding protein HflX; PFAM: GTP-binding protein, HSR1-related; SPTR: GTP-binding protein HflX; TIGRFAM: GTP-binding protein, HflX; Small GTP-binding protein; GTP-binding proten HflX 1604642 11054297 Murru_1473 Muricauda ruestringensis DSM 13258 GTP-binding proten HflX YP_004787936.1 1603431 R 886377 CDS YP_004787937.1 344202794 11054298 1604672..1605688 1 NC_015945.1 PFAM: Endonuclease/Exonuclease/phosphatase family; InterPro IPR005135; KEGG: fbc:FB2170_05240 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Putative uncharacterized protein; endonuclease/exonuclease/phosphatase 1605688 11054298 Murru_1474 Muricauda ruestringensis DSM 13258 endonuclease/exonuclease/phosphatase YP_004787937.1 1604672 D 886377 CDS YP_004787938.1 344202795 11054299 1605841..1608033 1 NC_015945.1 PFAM: Subtilase family; InterPro IPR003961:IPR000209; KEGG: mtt:Ftrac_1522 fibronectin type III domain protein; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; Fibronectin, type III; SMART: Fibronectin, type III; SPTR: Putative surface protein; peptidase S8 and S53 subtilisin kexin sedolisin 1608033 11054299 Murru_1475 Muricauda ruestringensis DSM 13258 peptidase S8 and S53 subtilisin kexin sedolisin YP_004787938.1 1605841 D 886377 CDS YP_004787939.1 344202796 11054300 complement(1608073..1608786) 1 NC_015945.1 PFAM: Predicted 3'-5' exonuclease related to the exonuclease domain of PolB; InterPro IPR019288; KEGG: fbc:FB2170_05225 hypothetical protein; PFAM: 3'-5' exonuclease, PolB-like; SPTR: Putative uncharacterized protein; 3'-5' exonuclease 1608786 11054300 Murru_1476 Muricauda ruestringensis DSM 13258 3'-5' exonuclease YP_004787939.1 1608073 R 886377 CDS YP_004787940.1 344202797 11054301 complement(1608796..1609266) 1 NC_015945.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; COGs: COG0350 Methylated DNA-protein cysteine methyltransferase; InterPro IPR014048; KEGG: fbc:FB2170_05215 methylated-DNA--protein-cysteine S-methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; SPTR: Methylated-DNA--protein-cysteine S-methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; methylated-DNA--protein-cysteine methyltransferase 1609266 11054301 Murru_1477 Muricauda ruestringensis DSM 13258 methylated-DNA--protein-cysteine methyltransferase YP_004787940.1 1608796 R 886377 CDS YP_004787941.1 344202798 11054302 complement(1609266..1610387) 1 NC_015945.1 PFAM: CBS domain; Domain of unknown function DUF21; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550:IPR000644; KEGG: fbc:FB2170_05210 hypothetical protein; PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; SPTR: Putative uncharacterized protein; hypothetical protein 1610387 11054302 Murru_1478 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787941.1 1609266 R 886377 CDS YP_004787942.1 344202799 11054303 complement(1610428..1611813) 1 NC_015945.1 PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: fbc:FB2170_05205 beta-N-acetylglucosaminidase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase 1611813 11054303 Murru_1479 Muricauda ruestringensis DSM 13258 beta-lactamase YP_004787942.1 1610428 R 886377 CDS YP_004787943.1 344202800 11054304 complement(1611791..1611976) 1 NC_015945.1 hypothetical protein 1611976 11054304 Murru_1480 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787943.1 1611791 R 886377 CDS YP_004787944.1 344202801 11054305 complement(1611999..1613285) 1 NC_015945.1 KEGG: pru:PRU_0337 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1613285 11054305 Murru_1481 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787944.1 1611999 R 886377 CDS YP_004787945.1 344202802 11054306 complement(1613304..1614293) 1 NC_015945.1 PFAM: Delta-aminolevulinic acid dehydratase; COGs: COG0113 Delta-aminolevulinic acid dehydratase; InterPro IPR001731; KEGG: fbc:FB2170_05200 delta-aminolevulinic acid dehydratase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase; PRIAM: Porphobilinogen synthase; SPTR: Delta-aminolevulinic acid dehydratase; porphobilinogen synthase 1614293 11054306 Murru_1482 Muricauda ruestringensis DSM 13258 porphobilinogen synthase YP_004787945.1 1613304 R 886377 CDS YP_004787946.1 344202803 11054307 complement(1614343..1615131) 1 NC_015945.1 PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family; COGs: COG0384 epimerase PhzC/PhzF homolog; InterPro IPR003719; KEGG: fbc:FB2170_05190 putative epimerase PhzC/PhzF-like protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein; SPTR: Predicted epimerase PhzC/PhzF-like protein; TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein; phenazine biosynthesis protein PhzF family protein 1615131 11054307 Murru_1483 Muricauda ruestringensis DSM 13258 phenazine biosynthesis protein PhzF family protein YP_004787946.1 1614343 R 886377 CDS YP_004787947.1 344202804 11054308 complement(1615184..1616167) 1 NC_015945.1 PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam); COGs: COG0338 Site-specific DNA methylase; InterPro IPR012327; KEGG: hps:HPSH_07080 adenine-specific DNA metylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; SPTR: Adenine-specific DNA metylase; TIGRFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase 1616167 11054308 Murru_1484 Muricauda ruestringensis DSM 13258 DNA adenine methylase YP_004787947.1 1615184 R 886377 CDS YP_004787948.1 344202805 11054309 complement(1616164..1617012) 1 NC_015945.1 PFAM: Restriction endonuclease EcoRV; InterPro IPR015314; KEGG: hps:HPSH_07075 type II restriction endonuclease; PFAM: Restriction endonuclease, type II, EcoRV; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Type II restriction endonuclease; type II site-specific deoxyribonuclease 1617012 11054309 Murru_1485 Muricauda ruestringensis DSM 13258 type II site-specific deoxyribonuclease YP_004787948.1 1616164 R 886377 CDS YP_004787949.1 344202806 11054310 complement(1617107..1618009) 1 NC_015945.1 PFAM: Coproporphyrinogen III oxidase; COGs: COG0408 Coproporphyrinogen III oxidase; InterPro IPR001260; KEGG: fbc:FB2170_05175 coproporphyrinogen III oxidase; PFAM: Coproporphyrinogen III oxidase; PRIAM: Coproporphyrinogen oxidase; SPTR: Coproporphyrinogen III oxidase; coproporphyrinogen oxidase 1618009 11054310 Murru_1486 Muricauda ruestringensis DSM 13258 coproporphyrinogen oxidase YP_004787949.1 1617107 R 886377 CDS YP_004787950.1 344202807 11054311 complement(1618012..1618497) 1 NC_015945.1 KEGG: zpr:ZPR_0109 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1618497 11054311 Murru_1487 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787950.1 1618012 R 886377 CDS YP_004787951.1 344202808 11054312 complement(1618494..1619519) 1 NC_015945.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase; COGs: COG0407 Uroporphyrinogen-III decarboxylase; HAMAP: Uroporphyrinogen decarboxylase HemE; InterPro IPR006361:IPR000257; KEGG: fbc:FB2170_05165 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); PRIAM: Uroporphyrinogen decarboxylase; SPTR: Uroporphyrinogen decarboxylase; TIGRFAM: Uroporphyrinogen decarboxylase HemE; uroporphyrinogen decarboxylase 1619519 11054312 Murru_1488 Muricauda ruestringensis DSM 13258 uroporphyrinogen decarboxylase YP_004787951.1 1618494 R 886377 CDS YP_004787952.1 344202809 11054313 complement(1619609..1620268) 1 NC_015945.1 PFAM: Uroporphyrinogen-III synthase HemD; COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: gfo:GFO_3225 uroporphyrinogen-III synthase; PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; SPTR: DNA methylase, putative; uroporphyrinogen III synthase HEM4 1620268 11054313 Murru_1489 Muricauda ruestringensis DSM 13258 uroporphyrinogen III synthase HEM4 YP_004787952.1 1619609 R 886377 CDS YP_004787953.1 344202810 11054314 complement(1620246..1621172) 1 NC_015945.1 PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase; COGs: COG0181 Porphobilinogen deaminase; InterPro IPR022417:IPR022418:IPR000860; KEGG: cat:CA2559_03640 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase, N-terminal; Porphobilinogen deaminase, C-terminal domain; SPTR: Porphobilinogen deaminase; TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; porphobilinogen deaminase 1621172 11054314 Murru_1490 Muricauda ruestringensis DSM 13258 porphobilinogen deaminase YP_004787953.1 1620246 R 886377 CDS YP_004787954.1 344202811 11054315 complement(1621169..1622425) 1 NC_015945.1 PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase; COGs: COG0373 Glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; InterPro IPR000343:IPR015895:IPR006151:IPR015896; KEGG: fbc:FB2170_05155 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain; SPTR: Glutamyl-tRNA reductase; TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; glutamyl-tRNA reductase 1622425 11054315 Murru_1491 Muricauda ruestringensis DSM 13258 glutamyl-tRNA reductase YP_004787954.1 1621169 R 886377 CDS YP_004787955.1 344202812 11054316 1622606..1623514 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: fbc:FB2170_05150 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator; AraC family transcriptional regulator 1623514 11054316 Murru_1492 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004787955.1 1622606 D 886377 CDS YP_004787956.1 344202813 11054317 1623525..1624280 1 NC_015945.1 PFAM: Trehalose utilisation; COGs: COG3828 conserved hypothetical protein; KEGG: sli:Slin_4030 PKD domain containing protein; SPTR: PKD domain containing protein; PKD domain-containing protein 1624280 11054317 Murru_1493 Muricauda ruestringensis DSM 13258 PKD domain-containing protein YP_004787956.1 1623525 D 886377 CDS YP_004787957.1 344202814 11054318 complement(1624266..1625117) 1 NC_015945.1 PFAM: Protein of unknown function (DUF1460); InterPro IPR010846; KEGG: rbi:RB2501_06030 hypothetical protein; PFAM: Protein of unknown function DUF1460; SPTR: Putative uncharacterized protein; hypothetical protein 1625117 11054318 Murru_1494 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787957.1 1624266 R 886377 CDS YP_004787958.1 344202815 11054319 complement(1625107..1626243) 1 NC_015945.1 PFAM: Mechanosensitive ion channel; COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: rbi:RB2501_06035 membrane protein; PFAM: Mechanosensitive ion channel MscS; SPTR: Membrane protein; mechanosensitive ion channel protein MscS 1626243 11054319 Murru_1495 Muricauda ruestringensis DSM 13258 mechanosensitive ion channel protein MscS YP_004787958.1 1625107 R 886377 CDS YP_004787959.1 344202816 11054320 1626294..1627373 1 NC_015945.1 PFAM: Ferrochelatase; TIGRFAM: ferrochelatase; COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); HAMAP: Ferrochelatase; InterPro IPR001015; KEGG: fbc:FB2170_05140 ferrochelatase; PFAM: Ferrochelatase; PRIAM: Ferrochelatase; SPTR: Ferrochelatase; TIGRFAM: Ferrochelatase; ferrochelatase 1627373 11054320 Murru_1496 Muricauda ruestringensis DSM 13258 ferrochelatase YP_004787959.1 1626294 D 886377 CDS YP_004787960.1 344202817 11054321 1627404..1628780 1 NC_015945.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: rbi:RB2501_06050 Na+-driven multidrug efflux pump; PFAM: Multi antimicrobial extrusion protein; SPTR: Na+-driven multidrug efflux pump; TIGRFAM: Multi antimicrobial extrusion protein; MATE efflux family protein 1628780 11054321 Murru_1497 Muricauda ruestringensis DSM 13258 MATE efflux family protein YP_004787960.1 1627404 D 886377 CDS YP_004787961.1 344202818 11054322 1628834..1629934 1 NC_015945.1 PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; COGs: COG2706 3-carboxymuconate cyclase; KEGG: fbc:FB2170_05130 hypothetical protein; PRIAM: 6-phosphogluconolactonase; SPTR: Putative uncharacterized protein; 6-phosphogluconolactonase 1629934 11054322 Murru_1498 Muricauda ruestringensis DSM 13258 6-phosphogluconolactonase YP_004787961.1 1628834 D 886377 CDS YP_004787962.1 344202819 11054323 complement(1630088..1630732) 1 NC_015945.1 KEGG: ehi:EHI_131230 actin; SPTR: Actin, putative; hypothetical protein 1630732 11054323 Murru_1499 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787962.1 1630088 R 886377 CDS YP_004787963.1 344202820 11054324 complement(1630753..1630959) 1 NC_015945.1 hypothetical protein 1630959 11054324 Murru_1500 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787963.1 1630753 R 886377 CDS YP_004787964.1 344202821 11054325 complement(1631020..1631952) 1 NC_015945.1 PFAM: Prolyl oligopeptidase family; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR001375; KEGG: fps:FP1243 peptidase; SPTR: Probable peptidase; peptidase 1631952 11054325 Murru_1501 Muricauda ruestringensis DSM 13258 peptidase YP_004787964.1 1631020 R 886377 CDS YP_004787965.1 344202822 11054326 complement(1631962..1633056) 1 NC_015945.1 KEGG: fbc:FB2170_06780 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1633056 11054326 Murru_1502 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787965.1 1631962 R 886377 CDS YP_004787966.1 344202823 11054327 1633312..1633485 1 NC_015945.1 hypothetical protein 1633485 11054327 Murru_1503 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787966.1 1633312 D 886377 CDS YP_004787967.1 344202824 11054328 complement(1633713..1635137) 1 NC_015945.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: rbi:RB2501_05855 putative dehydrogenase; PFAM: Oxidoreductase, N-terminal; SPTR: Putative dehydrogenase; oxidoreductase domain-containing protein 1635137 11054328 Murru_1504 Muricauda ruestringensis DSM 13258 oxidoreductase domain-containing protein YP_004787967.1 1633713 R 886377 CDS YP_004787968.1 344202825 11054329 complement(1635201..1635863) 1 NC_015945.1 PFAM: HD domain; COGs: COG1418 HD superfamily hydrolase; InterPro IPR003607:IPR006674; KEGG: gfo:GFO_3211 HD domain-containing protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: HD superfamily phosphohydrolase; metal dependent phosphohydrolase 1635863 11054329 Murru_1505 Muricauda ruestringensis DSM 13258 metal dependent phosphohydrolase YP_004787968.1 1635201 R 886377 CDS YP_004787969.1 344202826 11054330 complement(1635860..1636594) 1 NC_015945.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: fbc:FB2170_05070 1-acyl-sn-glycerol-3-phosphate acetyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: 1-acyl-sn-glycerol-3-phosphate acetyltransferase, putative; manually curated; phospholipid/glycerol acyltransferase 1636594 11054330 Murru_1506 Muricauda ruestringensis DSM 13258 phospholipid/glycerol acyltransferase YP_004787969.1 1635860 R 886377 CDS YP_004787970.1 344202827 11054331 complement(1636830..1637240) 1 NC_015945.1 PFAM: Protein of unknown function (DUF1094); InterPro IPR009474; KEGG: fbc:FB2170_05065 hypothetical protein; PFAM: Uncharacterised protein family UPF0403; SPTR: Putative uncharacterized protein; hypothetical protein 1637240 11054331 Murru_1507 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787970.1 1636830 R 886377 CDS YP_004787971.1 344202828 11054332 1637363..1638100 1 NC_015945.1 PFAM: DnaJ domain; Tellurite resistance protein TerB; COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR001623; KEGG: fbc:FB2170_05060 putative heat shock protein DnaJ; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Putative heat shock protein DnaJ; heat shock protein DnaJ domain-containing protein 1638100 11054332 Murru_1508 Muricauda ruestringensis DSM 13258 heat shock protein DnaJ domain-containing protein YP_004787971.1 1637363 D 886377 CDS YP_004787972.1 344202829 11054333 complement(1638097..1639329) 1 NC_015945.1 COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625; KEGG: zpr:ZPR_0424 putative sulfite reductase flavoprotein component; SPTR: Putative sulfite reductase flavoprotein component; putative sulfite reductase flavoprotein component 1639329 11054333 Murru_1509 Muricauda ruestringensis DSM 13258 putative sulfite reductase flavoprotein component YP_004787972.1 1638097 R 886377 CDS YP_004787973.1 344202830 11054334 1639372..1639956 1 NC_015945.1 KEGG: fbc:FB2170_05055 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1639956 11054334 Murru_1510 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787973.1 1639372 D 886377 CDS YP_004787974.1 344202831 11054335 1640041..1640478 1 NC_015945.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; COGs: COG2131 Deoxycytidylate deaminase; InterPro IPR002125; KEGG: fbc:FB2170_05050 deoxycytidylate deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: Deoxycytidylate deaminase; CMP/dCMP deaminase zinc-binding protein 1640478 11054335 Murru_1511 Muricauda ruestringensis DSM 13258 CMP/dCMP deaminase zinc-binding protein YP_004787974.1 1640041 D 886377 CDS YP_004787975.1 344202832 11054336 1640494..1642122 1 NC_015945.1 PFAM: Peptidase family S41; TIGRFAM: C-terminal peptidase (prc); COGs: COG0793 Periplasmic protease; InterPro IPR001478:IPR005151:IPR004447; KEGG: fbc:FB2170_05045 carboxy-terminal processing protease; PFAM: Peptidase S41; SMART: Peptidase S41; PDZ/DHR/GLGF; SPTR: Carboxy-terminal processing protease; TIGRFAM: Peptidase S41A, C-terminal peptidase; carboxyl-terminal protease 1642122 11054336 Murru_1512 Muricauda ruestringensis DSM 13258 carboxyl-terminal protease YP_004787975.1 1640494 D 886377 CDS YP_004787976.1 344202833 11054337 complement(1642124..1642324) 1 NC_015945.1 KEGG: fbc:FB2170_05040 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1642324 11054337 Murru_1513 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787976.1 1642124 R 886377 CDS YP_004787977.1 344202834 11054338 complement(1642334..1642918) 1 NC_015945.1 PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family; COGs: COG2095 Multiple antibiotic transporter; InterPro IPR002771; KEGG: fbc:FB2170_05035 putative transmembrane protein; PFAM: Multiple antibiotic resistance (MarC)-related; SPTR: Multiple antibiotic resistance (MarC)-related protein; TIGRFAM: Multiple antibiotic resistance (MarC)-related; multiple antibiotic resistance (MarC)-like protein 1642918 11054338 Murru_1514 Muricauda ruestringensis DSM 13258 multiple antibiotic resistance (MarC)-like protein YP_004787977.1 1642334 R 886377 CDS YP_004787978.1 344202835 11054339 1643042..1643611 1 NC_015945.1 PFAM: Protein of unknown function (DUF3109); KEGG: fbc:FB2170_05030 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1643611 11054339 Murru_1515 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787978.1 1643042 D 886377 CDS YP_004787979.1 344202836 11054340 complement(1643604..1645571) 1 NC_015945.1 PFAM: Histidine kinase; Tetratricopeptide repeat; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR019734:IPR001440:IPR013105:IPR010559; KEGG: fbc:FB2170_05025 putative two-component system sensor histidine kinase; PFAM: Signal transduction histidine kinase, internal region; Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: Putative two-component system sensor histidine kinase; putative signal transduction histidine kinase 1645571 11054340 Murru_1516 Muricauda ruestringensis DSM 13258 putative signal transduction histidine kinase YP_004787979.1 1643604 R 886377 CDS YP_004787980.1 344202837 11054341 complement(1645587..1646321) 1 NC_015945.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: fbc:FB2170_05020 autolysin response regulator; PFAM: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Autolysin response regulator; LytTR family two component transcriptional regulator 1646321 11054341 Murru_1517 Muricauda ruestringensis DSM 13258 LytTR family two component transcriptional regulator YP_004787980.1 1645587 R 886377 CDS YP_004787981.1 344202838 11054342 complement(1647445..1648098) 1 NC_015945.1 KEGG: fbc:FB2170_04985 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1648098 11054342 Murru_1518 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787981.1 1647445 R 886377 CDS YP_004787982.1 344202839 11054343 complement(1648098..1649816) 1 NC_015945.1 PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076:IPR000172; KEGG: rbi:RB2501_05745 GMC family oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; FAD dependent oxidoreductase; SPTR: Oxidoreductase, GMC family protein; glucose-methanol-choline oxidoreductase 1649816 11054343 Murru_1519 Muricauda ruestringensis DSM 13258 glucose-methanol-choline oxidoreductase YP_004787982.1 1648098 R 886377 CDS YP_004787983.1 344202840 11054344 1649953..1650951 1 NC_015945.1 PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: fbc:FB2170_04975 AP endonuclease, family 2; PFAM: Xylose isomerase, TIM barrel domain; SPTR: AP endonuclease, family 2; xylose isomerase domain-containing protein 1650951 11054344 Murru_1520 Muricauda ruestringensis DSM 13258 xylose isomerase domain-containing protein YP_004787983.1 1649953 D 886377 CDS YP_004787984.1 344202841 11054345 1650975..1651418 1 NC_015945.1 PFAM: DinB family; COGs: COG2318 conserved hypothetical protein; InterPro IPR007837; KEGG: rbi:RB2501_05735 hypothetical protein; PFAM: DinB; SPTR: Putative uncharacterized protein; DinB family protein 1651418 11054345 Murru_1521 Muricauda ruestringensis DSM 13258 DinB family protein YP_004787984.1 1650975 D 886377 CDS YP_004787985.1 344202842 11054346 1651442..1652671 1 NC_015945.1 PFAM: Nucleoside H+ symporter; TIGRFAM: nucleoside transporter; KEGG: zpr:ZPR_2440 nucleoside:proton symporter; SPTR: Nucleoside:H+ symporter; nucleoside:proton symporter 1652671 11054346 Murru_1522 Muricauda ruestringensis DSM 13258 nucleoside:proton symporter YP_004787985.1 1651442 D 886377 CDS YP_004787986.1 344202843 11054347 1652700..1653938 1 NC_015945.1 PFAM: Major Facilitator Superfamily; InterPro IPR011701; KEGG: rbi:RB2501_05725 hypothetical protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Putative uncharacterized protein; major facilitator superfamily protein 1653938 11054347 Murru_1523 Muricauda ruestringensis DSM 13258 major facilitator superfamily protein YP_004787986.1 1652700 D 886377 CDS YP_004787987.1 344202844 11054348 1653961..1655097 1 NC_015945.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: rbi:RB2501_05720 Gfo/Idh/MocA family oxidoreductase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase, Gfo/Idh/MocA family protein; oxidoreductase domain-containing protein 1655097 11054348 Murru_1524 Muricauda ruestringensis DSM 13258 oxidoreductase domain-containing protein YP_004787987.1 1653961 D 886377 CDS YP_004787988.1 344202845 11054349 complement(1655151..1655615) 1 NC_015945.1 PFAM: ASCH domain; COGs: COG4405 conserved hypothetical protein; InterPro IPR007374; KEGG: fbc:FB2170_04955 hypothetical protein; PFAM: ASCH domain; SPTR: Putative uncharacterized protein; ASCH domain-containing protein 1655615 11054349 Murru_1525 Muricauda ruestringensis DSM 13258 ASCH domain-containing protein YP_004787988.1 1655151 R 886377 CDS YP_004787989.1 344202846 11054350 1655778..1656830 1 NC_015945.1 PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307:IPR011418; KEGG: fbc:FB2170_04950 hypothetical protein; PFAM: Xylose isomerase, TIM barrel domain; AP endonuclease, family 2, C-terminal; SPTR: Putative uncharacterized protein; xylose isomerase domain-containing protein 1656830 11054350 Murru_1526 Muricauda ruestringensis DSM 13258 xylose isomerase domain-containing protein YP_004787989.1 1655778 D 886377 CDS YP_004787990.1 344202847 11054351 1656827..1657588 1 NC_015945.1 PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: rbi:RB2501_05695 putative secreted glycosyl hydrolase; PFAM: Protein of unknown function DUF1080; SPTR: Probable secreted glycosyl hydrolase; hypothetical protein 1657588 11054351 Murru_1527 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787990.1 1656827 D 886377 CDS YP_004787991.1 344202848 11054352 1657590..1658345 1 NC_015945.1 PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: rbi:RB2501_05690 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: Putative multi-domain protein; hypothetical protein 1658345 11054352 Murru_1528 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787991.1 1657590 D 886377 CDS YP_004787992.1 344202849 11054353 1658431..1659288 1 NC_015945.1 PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); Uncharacterized protein conserved in bacteria (DUF2333); TIGRFAM: TIGR00255 family protein; COGs: COG1561 Uncharacterized stress-induced protein; InterPro IPR013527:IPR013551:IPR005229; KEGG: fbc:FB2170_04945 hypothetical protein; PFAM: YicC-like, N-terminal; Domain of unknown function DUF1732; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00255; hypothetical protein 1659288 11054353 Murru_1529 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787992.1 1658431 D 886377 CDS YP_004787993.1 344202850 11054354 1659285..1659881 1 NC_015945.1 PFAM: Guanylate kinase; TIGRFAM: guanylate kinase; COGs: COG0194 Guanylate kinase; HAMAP: Guanylate kinase, sub-group; InterPro IPR008144:IPR008145:IPR017665; KEGG: fbc:FB2170_04940 guanylate kinase; PFAM: Guanylate kinase; PRIAM: Guanylate kinase; SMART: Guanylate kinase/L-type calcium channel; SPTR: Guanylate kinase; TIGRFAM: Guanylate kinase, sub-group; guanylate kinase 1659881 11054354 Murru_1530 Muricauda ruestringensis DSM 13258 guanylate kinase YP_004787993.1 1659285 D 886377 CDS YP_004787994.1 344202851 11054355 1659885..1660469 1 NC_015945.1 PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain; COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase; HAMAP: Probable nicotinate-nucleotide adenylyltransferase; InterPro IPR004820:IPR005248:IPR004821; KEGG: fbc:FB2170_04935 nicotinic acid mononucleotide adenyltransferase; PFAM: Cytidylyltransferase; PRIAM: Nicotinate-nucleotide adenylyltransferase; SPTR: Probable nicotinate-nucleotide adenylyltransferase; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; nicotinate-nucleotide adenylyltransferase 1660469 11054355 Murru_1531 Muricauda ruestringensis DSM 13258 nicotinate-nucleotide adenylyltransferase YP_004787994.1 1659885 D 886377 CDS YP_004787995.1 344202852 11054356 complement(1660472..1661578) 1 NC_015945.1 PFAM: Domain of unknown function (DUF377); COGs: COG2152 glycosylase; InterPro IPR007184; KEGG: zpr:ZPR_0445 glycosidase, PH1107-related protein; PFAM: Glycosidase, PH1107-related; SPTR: Glycosidase, PH1107-related protein; glycosidase-like protein 1661578 11054356 Murru_1532 Muricauda ruestringensis DSM 13258 glycosidase-like protein YP_004787995.1 1660472 R 886377 CDS YP_004787996.1 344202853 11054357 complement(1661584..1662282) 1 NC_015945.1 KEGG: fbc:FB2170_04915 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1662282 11054357 Murru_1533 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004787996.1 1661584 R 886377 CDS YP_004787997.1 344202854 11054358 complement(1662335..1664629) 1 NC_015945.1 PFAM: Phosphate transporter family; COGs: COG0306 Phosphate/sulphate permease; KEGG: fbc:FB2170_04910 phosphate sodium symporter; SPTR: Phosphate sodium symporter; phosphate sodium symporter 1664629 11054358 Murru_1534 Muricauda ruestringensis DSM 13258 phosphate sodium symporter YP_004787997.1 1662335 R 886377 CDS YP_004787998.1 344202855 11054359 complement(1664702..1665916) 1 NC_015945.1 PFAM: Phosphate-selective porin O and P; InterPro IPR010870; KEGG: fbc:FB2170_04855 phosphate-selective porin O and P; PFAM: Phosphate-selective porin O/P; SPTR: Phosphate-selective porin O and P; phosphate-selective porin O and P 1665916 11054359 Murru_1535 Muricauda ruestringensis DSM 13258 phosphate-selective porin O and P YP_004787998.1 1664702 R 886377 CDS YP_004787999.1 344202856 11054360 1666384..1667742 1 NC_015945.1 PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative; COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR006674:IPR003607:IPR006261; KEGG: fbc:FB2170_04850 dGTP triphosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; PRIAM: dGTPase; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: dGTP triphosphohydrolase; TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; deoxyguanosinetriphosphate triphosphohydrolase 1667742 11054360 Murru_1536 Muricauda ruestringensis DSM 13258 deoxyguanosinetriphosphate triphosphohydrolase YP_004787999.1 1666384 D 886377 CDS YP_004788000.1 344202857 11054361 complement(1667955..1669013) 1 NC_015945.1 PFAM: Protein of unknown function (DUF3078); KEGG: fbc:FB2170_04815 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1669013 11054361 Murru_1537 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788000.1 1667955 R 886377 CDS YP_004788001.1 344202858 11054362 complement(1669004..1670815) 1 NC_015945.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase; COGs: COG1154 Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; InterPro IPR005475:IPR005476:IPR005477; KEGG: fbc:FB2170_04810 1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: 1-deoxy-D-xylulose-5-phosphate synthase; SMART: Transketolase-like, pyrimidine-binding domain; SPTR: 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: Deoxyxylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 1670815 11054362 Murru_1538 Muricauda ruestringensis DSM 13258 1-deoxy-D-xylulose-5-phosphate synthase YP_004788001.1 1669004 R 886377 CDS YP_004788002.1 344202859 11054363 1670867..1671316 1 NC_015945.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; COGs: COG0590 Cytosine/adenosine deaminase; InterPro IPR002125; KEGG: fbc:FB2170_04805 putative cytosine/adenosine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: Putative cytosine/adenosine deaminase; CMP/dCMP deaminase zinc-binding protein 1671316 11054363 Murru_1539 Muricauda ruestringensis DSM 13258 CMP/dCMP deaminase zinc-binding protein YP_004788002.1 1670867 D 886377 CDS YP_004788003.1 344202860 11054364 complement(1671372..1671566) 1 NC_015945.1 PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1278 Cold shock protein; InterPro IPR002059:IPR011129; KEGG: fbc:FB2170_04800 hypothetical protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Putative uncharacterized protein; cold-shock DNA-binding domain-containing protein 1671566 11054364 Murru_1540 Muricauda ruestringensis DSM 13258 cold-shock DNA-binding domain-containing protein YP_004788003.1 1671372 R 886377 CDS YP_004788004.1 344202861 11054365 complement(1671648..1671908) 1 NC_015945.1 KEGG: fbc:FB2170_04795 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1671908 11054365 Murru_1541 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788004.1 1671648 R 886377 CDS YP_004788005.1 344202862 11054366 complement(1671905..1673689) 1 NC_015945.1 PFAM: CBS domain; Voltage gated chloride channel; COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807:IPR000644; KEGG: rbi:RB2501_05610 putative transport related, membrane protein; PFAM: Chloride channel, voltage gated; Cystathionine beta-synthase, core; SPTR: Putative transport related, membrane protein; Cl- channel voltage-gated family protein 1673689 11054366 Murru_1542 Muricauda ruestringensis DSM 13258 Cl- channel voltage-gated family protein YP_004788005.1 1671905 R 886377 CDS YP_004788006.1 344202863 11054367 complement(1673753..1675501) 1 NC_015945.1 PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type; COGs: COG0173 Aspartyl-tRNA synthetase; InterPro IPR004365:IPR004364:IPR004115:IPR004524; KEGG: cat:CA2559_01940 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain; PRIAM: Aspartate--tRNA ligase; SPTR: Aspartyl-tRNA synthetase; TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; aspartyl-tRNA synthetase 1675501 11054367 Murru_1543 Muricauda ruestringensis DSM 13258 aspartyl-tRNA synthetase YP_004788006.1 1673753 R 886377 CDS YP_004788007.1 344202864 11054368 1675866..1676216 1 NC_015945.1 KEGG: rbi:RB2501_05660 nicotinic acid mononucleotide adenyltransferase; SPTR: Nicotinic acid mononucleotide adenyltransferase; nicotinic acid mononucleotide adenyltransferase 1676216 11054368 Murru_1544 Muricauda ruestringensis DSM 13258 nicotinic acid mononucleotide adenyltransferase YP_004788007.1 1675866 D 886377 CDS YP_004788008.1 344202865 11054369 complement(1676295..1679789) 1 NC_015945.1 PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: rbi:RB2501_05600 AcrB/AcrD/AcrF family protein; PFAM: Acriflavin resistance protein; SPTR: AcrB/AcrD/AcrF family protein; acriflavin resistance protein 1679789 11054369 Murru_1545 Muricauda ruestringensis DSM 13258 acriflavin resistance protein YP_004788008.1 1676295 R 886377 CDS YP_004788009.1 344202866 11054370 complement(1679799..1680983) 1 NC_015945.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fbc:FB2170_04775 RND family efflux transporter MFP subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 1680983 11054370 Murru_1546 Muricauda ruestringensis DSM 13258 RND family efflux transporter MFP subunit YP_004788009.1 1679799 R 886377 CDS YP_004788010.1 344202867 11054371 complement(1681008..1682339) 1 NC_015945.1 PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fbc:FB2170_04770 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein, putative; outer membrane efflux protein 1682339 11054371 Murru_1547 Muricauda ruestringensis DSM 13258 outer membrane efflux protein YP_004788010.1 1681008 R 886377 CDS YP_004788011.1 344202868 11054372 complement(1682340..1682945) 1 NC_015945.1 PFAM: Bacterial regulatory proteins, tetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: rbi:RB2501_05585 hypothetical protein; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, tetR family protein; TetR family transcriptional regulator 1682945 11054372 Murru_1548 Muricauda ruestringensis DSM 13258 TetR family transcriptional regulator YP_004788011.1 1682340 R 886377 CDS YP_004788012.1 344202869 11054373 complement(1683037..1683183) 1 NC_015945.1 hypothetical protein 1683183 11054373 Murru_1549 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788012.1 1683037 R 886377 CDS YP_004788013.1 344202870 11054374 complement(1683158..1683592) 1 NC_015945.1 KEGG: rbi:RB2501_05580 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1683592 11054374 Murru_1550 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788013.1 1683158 R 886377 CDS YP_004788014.1 344202871 11054375 complement(1683582..1684130) 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: rbi:RB2501_05575 sigma-24 factor FecI; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: Sigma-24 (FecI); TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 1684130 11054375 Murru_1551 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004788014.1 1683582 R 886377 CDS YP_004788015.1 344202872 11054376 1684305..1685288 1 NC_015945.1 PFAM: Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: fbc:FB2170_04750 putative isoprenoid biosynthesis related protein; PFAM: Polyprenyl synthetase; PRIAM: Geranyltranstransferase; SPTR: Putative isoprenyl synthetase; geranyltranstransferase 1685288 11054376 Murru_1552 Muricauda ruestringensis DSM 13258 geranyltranstransferase YP_004788015.1 1684305 D 886377 CDS YP_004788016.1 344202873 11054377 complement(1685285..1686427) 1 NC_015945.1 PFAM: Lycopene cyclase protein; TIGRFAM: lycopene cyclase family protein; InterPro IPR008671; KEGG: rbi:RB2501_05565 lycopene cyclase; PFAM: Lycopene cyclase-type, FAD-binding; SPTR: Lycopene cyclase; Lycopene beta and epsilon cyclase 1686427 11054377 Murru_1553 Muricauda ruestringensis DSM 13258 Lycopene beta and epsilon cyclase YP_004788016.1 1685285 R 886377 CDS YP_004788017.1 344202874 11054378 complement(1686469..1686804) 1 NC_015945.1 PFAM: Protein of unknown function DUF86; COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: tba:TERMP_00142 hypothetical protein; PFAM: Protein of unknown function DUF86; SPTR: Putative toxin-antitoxin system, antitoxin component; hypothetical protein 1686804 11054378 Murru_1554 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788017.1 1686469 R 886377 CDS YP_004788018.1 344202875 11054379 complement(1686797..1687087) 1 NC_015945.1 PFAM: Nucleotidyltransferase domain; COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: dfe:Dfer_3676 DNA polymerase beta domain protein region; PFAM: Nucleotidyl transferase domain; SPTR: DNA polymerase beta domain protein region; DNA polymerase beta domain-containing protein 1687087 11054379 Murru_1555 Muricauda ruestringensis DSM 13258 DNA polymerase beta domain-containing protein YP_004788018.1 1686797 R 886377 CDS YP_004788019.1 344202876 11054380 complement(1687161..1689431) 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: rbi:RB2501_05560 putative TonB-dependent outer membrane receptor protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative TonB-dependent outer membrane receptor protein; TonB-dependent receptor plug 1689431 11054380 Murru_1556 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004788019.1 1687161 R 886377 CDS YP_004788020.1 344202877 11054381 1689472..1690167 1 NC_015945.1 PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR022687:IPR001367:IPR007167:IPR022689; KEGG: rbi:RB2501_05555 iron dependent repressor; PFAM: Iron dependent repressor; Iron dependent repressor, N-terminal; Ferrous iron transporter, FeoA subunit; SMART: Iron dependent repressor, diptheria toxin type; SPTR: Iron dependent repressor; DtxR family iron (metal) dependent repressor 1690167 11054381 Murru_1557 Muricauda ruestringensis DSM 13258 DtxR family iron (metal) dependent repressor YP_004788020.1 1689472 D 886377 CDS YP_004788021.1 344202878 11054382 1690167..1690988 1 NC_015945.1 PFAM: ZIP Zinc transporter; COGs: COG0428 divalent heavy-metal cations transporter; InterPro IPR003689; KEGG: fbc:FB2170_04695 GufA protein; PFAM: Zinc/iron permease; SPTR: GufA protein; zinc/iron permease 1690988 11054382 Murru_1558 Muricauda ruestringensis DSM 13258 zinc/iron permease YP_004788021.1 1690167 D 886377 CDS YP_004788022.1 344202879 11054383 complement(1690995..1692122) 1 NC_015945.1 TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fbc:FB2170_10626 cation efflux system protein; SPTR: Cation efflux system protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 1692122 11054383 Murru_1559 Muricauda ruestringensis DSM 13258 RND family efflux transporter MFP subunit YP_004788022.1 1690995 R 886377 CDS YP_004788023.1 344202880 11054384 complement(1692125..1696474) 1 NC_015945.1 PFAM: Outer membrane efflux protein; AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 Putative silver efflux pump; InterPro IPR001036:IPR004763; KEGG: fbc:FB2170_10631 putative transport-related membrane protein; PFAM: Acriflavin resistance protein; SPTR: Putative transport-related membrane protein; TIGRFAM: Heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump 1696474 11054384 Murru_1560 Muricauda ruestringensis DSM 13258 CzcA family heavy metal efflux pump YP_004788023.1 1692125 R 886377 CDS YP_004788024.1 344202881 11054385 complement(1696552..1696950) 1 NC_015945.1 KEGG: fbc:FB2170_10636 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1696950 11054385 Murru_1561 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788024.1 1696552 R 886377 CDS YP_004788025.1 344202882 11054386 complement(1697042..1700158) 1 NC_015945.1 PFAM: BNR/Asp-box repeat; KEGG: sli:Slin_1570 glycosyl hydrolase BNR repeat-containing protein; SPTR: Putative glycosyl hydrolase, BNR repeat; glycosyl hydrolase family protein 1700158 11054386 Murru_1562 Muricauda ruestringensis DSM 13258 glycosyl hydrolase family protein YP_004788025.1 1697042 R 886377 CDS YP_004788026.1 344202883 11054387 complement(1700236..1700727) 1 NC_015945.1 KEGG: fba:FIC_02077 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1700727 11054387 Murru_1563 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788026.1 1700236 R 886377 CDS YP_004788027.1 344202884 11054388 complement(1700734..1701210) 1 NC_015945.1 KEGG: mtt:Ftrac_3185 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1701210 11054388 Murru_1564 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788027.1 1700734 R 886377 CDS YP_004788028.1 344202885 11054389 complement(1701217..1701972) 1 NC_015945.1 PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: gob:Gobs_3235 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 1701972 11054389 Murru_1565 Muricauda ruestringensis DSM 13258 3-oxoacyl-ACP reductase YP_004788028.1 1701217 R 886377 CDS YP_004788029.1 344202886 11054390 1702078..1702503 1 NC_015945.1 KEGG: fbc:FB2170_04655 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1702503 11054390 Murru_1566 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788029.1 1702078 D 886377 CDS YP_004788030.1 344202887 11054391 1702537..1702944 1 NC_015945.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2141); COGs: COG4704 conserved hypothetical protein; InterPro IPR018673; KEGG: rbi:RB2501_05535 hypothetical protein; PFAM: Protein of unknown function DUF2141; SPTR: Putative uncharacterized protein; hypothetical protein 1702944 11054391 Murru_1567 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788030.1 1702537 D 886377 CDS YP_004788031.1 344202888 11054392 1702955..1703347 1 NC_015945.1 PFAM: Protein of unknown function (DUF423); COGs: COG2363 Uncharacterized small membrane protein; InterPro IPR006696; KEGG: fbc:FB2170_04650 hypothetical protein; PFAM: Protein of unknown function DUF423; SPTR: Putative uncharacterized protein; hypothetical protein 1703347 11054392 Murru_1568 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788031.1 1702955 D 886377 CDS YP_004788032.1 344202889 11054393 complement(1703344..1704057) 1 NC_015945.1 KEGG: zpr:ZPR_3205 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1704057 11054393 Murru_1569 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788032.1 1703344 R 886377 CDS YP_004788033.1 344202890 11054394 complement(1704162..1704914) 1 NC_015945.1 KEGG: zpr:ZPR_3204 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1704914 11054394 Murru_1570 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788033.1 1704162 R 886377 CDS YP_004788034.1 344202891 11054395 complement(1704935..1705771) 1 NC_015945.1 KEGG: zpr:ZPR_3203 anti-ECFsigma factor, ChrR; SPTR: Anti-ECFsigma factor, ChrR; anti-ECF sigma factor ChrR 1705771 11054395 Murru_1571 Muricauda ruestringensis DSM 13258 anti-ECF sigma factor ChrR YP_004788034.1 1704935 R 886377 CDS YP_004788035.1 344202892 11054396 complement(1705723..1706268) 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: zpr:ZPR_3202 RNA polymerase, sigma-24 subunit, ECF subfamily protein; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily protein; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 1706268 11054396 Murru_1572 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004788035.1 1705723 R 886377 CDS YP_004788036.1 344202893 11054397 complement(1706466..1706609) 1 NC_015945.1 hypothetical protein 1706609 11054397 Murru_1573 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788036.1 1706466 R 886377 CDS YP_004788037.1 344202894 11054398 complement(1706617..1708833) 1 NC_015945.1 PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain; COGs: COG0370 Fe2+ transport system protein B; InterProIPR002917:IPR011619:IPR011642:IPR011640:IPR 005225:IPR003373; KEGG: fbc:FB2170_04635 hypothetical protein; PFAM: Ferrous iron transport protein B, N-terminal; GTP-binding protein, HSR1-related; Nucleoside recognition; Ferrous iron transport protein B, C-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Ferrous iron transport protein B; Small GTP-binding protein; ferrous iron transport protein B 1708833 11054398 Murru_1574 Muricauda ruestringensis DSM 13258 ferrous iron transport protein B YP_004788037.1 1706617 R 886377 CDS YP_004788038.1 344202895 11054399 complement(1708830..1709072) 1 NC_015945.1 PFAM: FeoA domain; InterPro IPR007167; KEGG: fbc:FB2170_04630 putative ferrous iron transport protein A; PFAM: Ferrous iron transporter, FeoA subunit; SMART: Ferrous iron transporter, FeoA subunit; SPTR: Probable ferrous iron transport protein A; FeoA family protein 1709072 11054399 Murru_1575 Muricauda ruestringensis DSM 13258 FeoA family protein YP_004788038.1 1708830 R 886377 CDS YP_004788039.1 344202896 11054400 complement(1709162..1709836) 1 NC_015945.1 PFAM: SCO1/SenC; COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: fbc:FB2170_04625 hypothetical protein; PFAM: Copper chaperone SCO1/SenC; SPTR: Putative uncharacterized protein; electron transport protein SCO1/SenC 1709836 11054400 Murru_1576 Muricauda ruestringensis DSM 13258 electron transport protein SCO1/SenC YP_004788039.1 1709162 R 886377 CDS YP_004788040.1 344202897 11054401 1709964..1711343 1 NC_015945.1 PFAM: Peptidase family M50; TIGRFAM: RIP metalloprotease RseP; COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR008915; KEGG: fbc:FB2170_04620 membrane-associated zinc metalloprotease; PFAM: Peptidase M50; SPTR: Membrane-associated zinc metalloprotease; peptidase M50 1711343 11054401 Murru_1577 Muricauda ruestringensis DSM 13258 peptidase M50 YP_004788040.1 1709964 D 886377 CDS YP_004788041.1 344202898 11054403 1712403..1712726 1 NC_015945.1 hypothetical protein 1712726 11054403 Murru_1578 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788041.1 1712403 D 886377 CDS YP_004788042.1 344202899 11054404 1712756..1712848 1 NC_015945.1 hypothetical protein 1712848 11054404 Murru_1579 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788042.1 1712756 D 886377 CDS YP_004788043.1 344202900 11054406 1713414..1714079 1 NC_015945.1 PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; COGs: COG0450 Peroxiredoxin; InterPro IPR000866:IPR019479; KEGG: zpr:ZPR_1796 antioxidant, AhpC/TSA family protein; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Peroxiredoxin, C-terminal; PRIAM: Peroxiredoxin; SPTR: Antioxidant, AhpC/TSA family protein; peroxiredoxin 1714079 11054406 Murru_1581 Muricauda ruestringensis DSM 13258 peroxiredoxin YP_004788043.1 1713414 D 886377 CDS YP_004788044.1 344202901 11054407 1714136..1715476 1 NC_015945.1 PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279:IPR001763; KEGG: rbi:RB2501_09155 rhodanese-like protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; Rhodanese-like; SPTR: Rhodanese-like protein; beta-lactamase domain-containing protein 1715476 11054407 Murru_1582 Muricauda ruestringensis DSM 13258 beta-lactamase domain-containing protein YP_004788044.1 1714136 D 886377 CDS YP_004788045.1 344202902 11054408 1715473..1715952 1 NC_015945.1 PFAM: Ferritin-like domain; COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR008331; KEGG: psm:PSM_A3059 DNA-binding DPS protein; PFAM: Ferritin/Dps protein; SPTR: DNA-binding DPS protein; ferritin Dps family protein 1715952 11054408 Murru_1583 Muricauda ruestringensis DSM 13258 ferritin Dps family protein YP_004788045.1 1715473 D 886377 CDS YP_004788046.1 344202903 11054409 1716048..1717382 1 NC_015945.1 PFAM: Bacterial Cytochrome Ubiquinol Oxidase; COGs: COG1271 Cytochrome bd-type quinol oxidase subunit 1; InterPro IPR002585; KEGG: fjo:Fjoh_4879 cytochrome bd ubiquinol oxidase, subunit I; PFAM: Cytochrome d ubiquinol oxidase, subunit I; SPTR: Cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I 1717382 11054409 Murru_1584 Muricauda ruestringensis DSM 13258 cytochrome bd ubiquinol oxidase subunit I YP_004788046.1 1716048 D 886377 CDS YP_004788047.1 344202904 11054410 1717385..1718461 1 NC_015945.1 PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB); COGs: COG1294 Cytochrome bd-type quinol oxidase subunit 2; InterPro IPR003317; KEGG: fjo:Fjoh_4878 cytochrome d ubiquinol oxidase, subunit II; PFAM: Cytochrome d ubiquinol oxidase, subunit II; SPTR: Cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome d ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II 1718461 11054410 Murru_1585 Muricauda ruestringensis DSM 13258 cytochrome d ubiquinol oxidase subunit II YP_004788047.1 1717385 D 886377 CDS YP_004788048.1 344202905 11054412 complement(1719209..1719613) 1 NC_015945.1 PFAM: Response regulator receiver domain; InterPro IPR001789; KEGG: chu:CHU_3216 two-component response regulator, CheY-like; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Two-component response regulator, CheY-like; response regulator receiver 1719613 11054412 Murru_1586 Muricauda ruestringensis DSM 13258 response regulator receiver YP_004788048.1 1719209 R 886377 CDS YP_004788049.1 344202906 11054413 complement(1719716..1720129) 1 NC_015945.1 PFAM: YeeE/YedE family (DUF395); InterPro IPR007272; KEGG: zpr:ZPR_2396 YeeE/YedE domain-containing protein; PFAM: Domain of unknown function DUF395, YeeE/YedE; SPTR: YeeE/YedE domain-containing protein; hypothetical protein 1720129 11054413 Murru_1587 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788049.1 1719716 R 886377 CDS YP_004788050.1 344202907 11054414 complement(1720126..1720710) 1 NC_015945.1 PFAM: YeeE/YedE family (DUF395); InterPro IPR007272; KEGG: fbc:FB2170_01597 hypothetical protein; PFAM: Domain of unknown function DUF395, YeeE/YedE; SPTR: Putative uncharacterized protein; hypothetical protein 1720710 11054414 Murru_1588 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788050.1 1720126 R 886377 CDS YP_004788051.1 344202908 11054415 complement(1720743..1720946) 1 NC_015945.1 PFAM: Protein of unknown function (DUF2892); KEGG: fps:FP1808 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1720946 11054415 Murru_1589 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788051.1 1720743 R 886377 CDS YP_004788052.1 344202909 11054416 complement(1720957..1721262) 1 NC_015945.1 KEGG: fbc:FB2170_14843 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1721262 11054416 Murru_1590 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788052.1 1720957 R 886377 CDS YP_004788053.1 344202910 11054417 complement(1721368..1724562) 1 NC_015945.1 PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: fbc:FB2170_14848 transporter, AcrB/D/F family protein; PFAM: Acriflavin resistance protein; SPTR: Transporter, AcrB/D/F family protein; acriflavin resistance protein 1724562 11054417 Murru_1591 Muricauda ruestringensis DSM 13258 acriflavin resistance protein YP_004788053.1 1721368 R 886377 CDS YP_004788054.1 344202911 11054418 complement(1724579..1725670) 1 NC_015945.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fbc:FB2170_14853 acriflavin resistance protein AcrE; PFAM: Secretion protein HlyD; SPTR: Secretion protein HlyD; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 1725670 11054418 Murru_1592 Muricauda ruestringensis DSM 13258 RND family efflux transporter MFP subunit YP_004788054.1 1724579 R 886377 CDS YP_004788055.1 344202912 11054419 complement(1725678..1726982) 1 NC_015945.1 PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fbc:FB2170_14858 outer membrane efflux family protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux family protein, putative; outer membrane efflux protein 1726982 11054419 Murru_1593 Muricauda ruestringensis DSM 13258 outer membrane efflux protein YP_004788055.1 1725678 R 886377 CDS YP_004788056.1 344202913 11054420 complement(1727147..1727245) 1 NC_015945.1 KEGG: fbc:FB2170_14868 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1727245 11054420 Murru_1594 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788056.1 1727147 R 886377 CDS YP_004788057.1 344202914 11054421 complement(1727288..1728745) 1 NC_015945.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: fbc:FB2170_14873 sulfide-quinone reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Sulfide-quinone reductase, putative; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1728745 11054421 Murru_1595 Muricauda ruestringensis DSM 13258 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004788057.1 1727288 R 886377 CDS YP_004788058.1 344202915 11054422 complement(1729367..1729573) 1 NC_015945.1 PFAM: Protein of unknown function (DUF2892); KEGG: zpr:ZPR_1809 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1729573 11054422 Murru_1596 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788058.1 1729367 R 886377 CDS YP_004788059.1 344202916 11054423 1729963..1730841 1 NC_015945.1 PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: fbc:FB2170_14978 putative transmembrane protein; PFAM: Fatty acid hydroxylase; SPTR: Probable transmembrane protein; fatty acid hydroxylase 1730841 11054423 Murru_1597 Muricauda ruestringensis DSM 13258 fatty acid hydroxylase YP_004788059.1 1729963 D 886377 CDS YP_004788060.1 344202917 11054424 complement(1730845..1731444) 1 NC_015945.1 PFAM: Protein of unknown function (DUF3365); KEGG: fbc:FB2170_14983 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1731444 11054424 Murru_1598 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788060.1 1730845 R 886377 CDS YP_004788061.1 344202918 11054425 complement(1731444..1731713) 1 NC_015945.1 PFAM: Heavy-metal-associated domain; KEGG: fbc:FB2170_14988 heavy metal transport/detoxification protein; SPTR: Heavy metal transport/detoxification protein; manually curated; heavy metal transport/detoxification protein 1731713 11054425 Murru_1599 Muricauda ruestringensis DSM 13258 heavy metal transport/detoxification protein YP_004788061.1 1731444 R 886377 CDS YP_004788062.1 344202919 11054426 complement(1731730..1732074) 1 NC_015945.1 PFAM: Rhodanese-like domain; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: zpr:ZPR_1797 rhodanese-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Rhodanese-like protein; rhodanese-like protein 1732074 11054426 Murru_1600 Muricauda ruestringensis DSM 13258 rhodanese-like protein YP_004788062.1 1731730 R 886377 CDS YP_004788063.1 344202920 11054427 complement(1732182..1733591) 1 NC_015945.1 PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279:IPR001763; KEGG: fbc:FB2170_02165 metallo-beta-lactamase superfamily protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; Rhodanese-like; SPTR: Metallo-beta-lactamase superfamily protein; beta-lactamase domain-containing protein 1733591 11054427 Murru_1601 Muricauda ruestringensis DSM 13258 beta-lactamase domain-containing protein YP_004788063.1 1732182 R 886377 CDS YP_004788064.1 344202921 11054428 complement(1733648..1735381) 1 NC_015945.1 PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547:IPR002645:IPR001902; KEGG: rbi:RB2501_07240 sulfate transporter; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Sulfate transporter; TIGRFAM: Sulphate anion transporter; sulfate transporter 1735381 11054428 Murru_1602 Muricauda ruestringensis DSM 13258 sulfate transporter YP_004788064.1 1733648 R 886377 CDS YP_004788065.1 344202922 11054429 complement(1735443..1736075) 1 NC_015945.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595:IPR001808; KEGG: rbi:RB2501_07235 Crp family transcriptional regulator; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SPTR: Transcriptional regulator, Crp family protein; Crp/Fnr family transcriptional regulator 1736075 11054429 Murru_1603 Muricauda ruestringensis DSM 13258 Crp/Fnr family transcriptional regulator YP_004788065.1 1735443 R 886377 CDS YP_004788066.1 344202923 11054430 complement(1736190..1737314) 1 NC_015945.1 PFAM: Metalloenzyme superfamily; KEGG: pha:PSHAa1861 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1737314 11054430 Murru_1604 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788066.1 1736190 R 886377 CDS YP_004788067.1 344202924 11054431 1737607..1739088 1 NC_015945.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484:IPR018485; KEGG: rbi:RB2501_04535 putative xylulose kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; PRIAM: Xylulokinase; SPTR: Putative xylulose kinase; Xylulokinase 1739088 11054431 Murru_1605 Muricauda ruestringensis DSM 13258 Xylulokinase YP_004788067.1 1737607 D 886377 CDS YP_004788068.1 344202925 11054432 1739104..1740429 1 NC_015945.1 PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase; COGs: COG2115 Xylose isomerase; HAMAP: Xylose isomerase; InterPro IPR012307:IPR001998:IPR013452; KEGG: rbi:RB2501_04540 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; PRIAM: Xylose isomerase; SPTR: Xylose isomerase; TIGRFAM: Xylose isomerase, bacterial type; Xylose isomerase 1740429 11054432 Murru_1606 Muricauda ruestringensis DSM 13258 Xylose isomerase YP_004788068.1 1739104 D 886377 CDS YP_004788069.1 344202926 11054433 1740489..1742138 1 NC_015945.1 PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG4146 symporter; InterPro IPR001734:IPR019900; KEGG: rbi:RB2501_08550 putative symporter YidK; PFAM: Sodium/solute symporter; SPTR: Putative sodium/myo-inositol cotransporter; TIGRFAM: Sodium/solute symporter, subgroup; SSS sodium solute transporter superfamily protein 1742138 11054433 Murru_1607 Muricauda ruestringensis DSM 13258 SSS sodium solute transporter superfamily protein YP_004788069.1 1740489 D 886377 CDS YP_004788070.1 344202927 11054434 complement(1742288..1742980) 1 NC_015945.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: fjo:Fjoh_2165 LytTR family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SMART: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SPTR: Two-component system response regulator protein; LytTR family two component transcriptional regulator 1742980 11054434 Murru_1608 Muricauda ruestringensis DSM 13258 LytTR family two component transcriptional regulator YP_004788070.1 1742288 R 886377 CDS YP_004788071.1 344202928 11054435 complement(1742984..1743982) 1 NC_015945.1 PFAM: Histidine kinase; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: gfo:GFO_2163 two-component system sensor histidine kinase; PFAM: Signal transduction histidine kinase, internal region; SPTR: Putative two-component system sensor but no kinase domain; putative signal transduction histidine kinase 1743982 11054435 Murru_1609 Muricauda ruestringensis DSM 13258 putative signal transduction histidine kinase YP_004788071.1 1742984 R 886377 CDS YP_004788072.1 344202929 11054436 1744250..1744810 1 NC_015945.1 PFAM: YceI-like domain; COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: rbi:RB2501_00491 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like; SPTR: Putative uncharacterized protein; hypothetical protein 1744810 11054436 Murru_1610 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788072.1 1744250 D 886377 CDS YP_004788073.1 344202930 11054437 1745352..1746146 1 NC_015945.1 KEGG: fbc:FB2170_06990 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1746146 11054437 Murru_1611 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788073.1 1745352 D 886377 CDS YP_004788074.1 344202931 11054438 1746143..1748908 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_12426 putative TonB-dependent outer membrane receptor protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative TonB-dependent outer membrane receptor protein; TonB-dependent receptor plug 1748908 11054438 Murru_1612 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004788074.1 1746143 D 886377 CDS YP_004788075.1 344202932 11054439 1748920..1750089 1 NC_015945.1 KEGG: fbc:FB2170_07000 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1750089 11054439 Murru_1613 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788075.1 1748920 D 886377 CDS YP_004788076.1 344202933 11054440 1750102..1751850 1 NC_015945.1 KEGG: fbc:FB2170_07005 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1751850 11054440 Murru_1614 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788076.1 1750102 D 886377 CDS YP_004788077.1 344202934 11054441 1752029..1752337 1 NC_015945.1 KEGG: rbi:RB2501_05250 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1752337 11054441 Murru_1615 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788077.1 1752029 D 886377 CDS YP_004788078.1 344202935 11054442 complement(1752342..1753283) 1 NC_015945.1 PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: fbc:FB2170_04450 putative oxidoreductase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: L-threonine 3-dehydrogenase; SPTR: Putative oxidoreductase protein; L-threonine 3-dehydrogenase 1753283 11054442 Murru_1616 Muricauda ruestringensis DSM 13258 L-threonine 3-dehydrogenase YP_004788078.1 1752342 R 886377 CDS YP_004788079.1 344202936 11054443 1753348..1753845 1 NC_015945.1 KEGG: fbc:FB2170_04445 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1753845 11054443 Murru_1617 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788079.1 1753348 D 886377 CDS YP_004788080.1 344202937 11054444 1753835..1754335 1 NC_015945.1 KEGG: cat:CA2559_04740 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1754335 11054444 Murru_1618 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788080.1 1753835 D 886377 CDS YP_004788081.1 344202938 11054445 complement(1754337..1755038) 1 NC_015945.1 KEGG: rbi:RB2501_05225 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1755038 11054445 Murru_1619 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788081.1 1754337 R 886377 CDS YP_004788082.1 344202939 11054446 complement(1755120..1755929) 1 NC_015945.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR006115; KEGG: fbc:FB2170_04415 hypothetical protein; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; SPTR: Putative uncharacterized protein; manually curated; 6-phosphogluconate dehydrogenase 1755929 11054446 Murru_1620 Muricauda ruestringensis DSM 13258 6-phosphogluconate dehydrogenase YP_004788082.1 1755120 R 886377 CDS YP_004788083.1 344202940 11054447 complement(1755922..1758192) 1 NC_015945.1 PFAM: Peptidase family M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: fbc:FB2170_04410 peptidase, M20/M25/M40 family protein; PFAM: Peptidase M28; SPTR: Peptidase, M20/M25/M40 family protein; manually curated; peptidase M28 1758192 11054447 Murru_1621 Muricauda ruestringensis DSM 13258 peptidase M28 YP_004788083.1 1755922 R 886377 CDS YP_004788084.1 344202941 11054448 1758228..1758785 1 NC_015945.1 PFAM: CBS domain; COGs: COG2524 transcriptional regulator protein; InterPro IPR000644; KEGG: rbi:RB2501_05205 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain protein; putative signal transduction protein 1758785 11054448 Murru_1622 Muricauda ruestringensis DSM 13258 putative signal transduction protein YP_004788084.1 1758228 D 886377 CDS YP_004788085.1 344202942 11054449 complement(1758798..1759151) 1 NC_015945.1 KEGG: fbc:FB2170_04400 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1759151 11054449 Murru_1623 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788085.1 1758798 R 886377 CDS YP_004788086.1 344202943 11054450 complement(1759161..1759733) 1 NC_015945.1 PFAM: Pentapeptide repeats (8 copies); InterPro IPR001646; KEGG: fbc:FB2170_04390 hypothetical protein; PFAM: Pentapeptide repeat; SPTR: Putative uncharacterized protein; pentapeptide repeat-containing protein 1759733 11054450 Murru_1624 Muricauda ruestringensis DSM 13258 pentapeptide repeat-containing protein YP_004788086.1 1759161 R 886377 CDS YP_004788087.1 344202944 11054451 complement(1759733..1762882) 1 NC_015945.1 PFAM: BNR/Asp-box repeat; InterPro IPR002860; KEGG: fbc:FB2170_04380 hypothetical protein; PFAM: BNR repeat; SPTR: Putative uncharacterized protein; glycosyl hydrolase family protein 1762882 11054451 Murru_1625 Muricauda ruestringensis DSM 13258 glycosyl hydrolase family protein YP_004788087.1 1759733 R 886377 CDS YP_004788088.1 344202945 11054452 complement(1763132..1763623) 1 NC_015945.1 KEGG: fbc:FB2170_04395 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1763623 11054452 Murru_1626 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788088.1 1763132 R 886377 CDS YP_004788089.1 344202946 11054453 complement(1763657..1764355) 1 NC_015945.1 PFAM: Protein of unknown function (DUF541); InterPro IPR007497; KEGG: rbi:RB2501_03085 hypothetical protein; PFAM: Protein of unknown function DUF541; SPTR: Putative uncharacterized protein; hypothetical protein 1764355 11054453 Murru_1627 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788089.1 1763657 R 886377 CDS YP_004788090.1 344202947 11054454 1764479..1765615 1 NC_015945.1 PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase; COGs: COG1929 Glycerate kinase; InterPro IPR004381; KEGG: fbc:FB2170_06465 hypothetical protein; PFAM: Glycerate kinase; PRIAM: Glycerate kinase; SPTR: Putative uncharacterized protein; TIGRFAM: Glycerate kinase; glycerate kinase 1765615 11054454 Murru_1628 Muricauda ruestringensis DSM 13258 glycerate kinase YP_004788090.1 1764479 D 886377 CDS YP_004788091.1 344202948 11054455 complement(1765612..1766214) 1 NC_015945.1 PFAM: Acetyltransferase (GNAT) family; COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: vfm:VFMJ11_A0648 acetyltransferase, GNAT family; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Acetyltransferase, gnat family; N-acetyltransferase GCN5 1766214 11054455 Murru_1629 Muricauda ruestringensis DSM 13258 N-acetyltransferase GCN5 YP_004788091.1 1765612 R 886377 CDS YP_004788092.1 344202949 11054456 complement(1766422..1766892) 1 NC_015945.1 KEGG: rbi:RB2501_15084 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1766892 11054456 Murru_1630 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788092.1 1766422 R 886377 CDS YP_004788093.1 344202950 11054457 complement(1766946..1767440) 1 NC_015945.1 PFAM: Ferritin-like domain; COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR008331; KEGG: mtt:Ftrac_2175 ferritin dps family protein; PFAM: Ferritin/Dps protein; SPTR: Starvation-inducible DNA-binding protein homolog; ferritin Dps family protein 1767440 11054457 Murru_1631 Muricauda ruestringensis DSM 13258 ferritin Dps family protein YP_004788093.1 1766946 R 886377 CDS YP_004788094.1 344202951 11054458 complement(1767688..1767945) 1 NC_015945.1 hypothetical protein 1767945 11054458 Murru_1632 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788094.1 1767688 R 886377 CDS YP_004788095.1 344202952 11054459 1768111..1768443 1 NC_015945.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424:IPR011344; KEGG: fbc:FB2170_04360 single-strand binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; single-strand binding protein 1768443 11054459 Murru_1633 Muricauda ruestringensis DSM 13258 single-strand binding protein YP_004788095.1 1768111 D 886377 CDS YP_004788096.1 344202953 11054460 1768585..1768989 1 NC_015945.1 KEGG: rbi:RB2501_05175 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1768989 11054460 Murru_1634 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788096.1 1768585 D 886377 CDS YP_004788097.1 344202954 11054461 complement(1769192..1770745) 1 NC_015945.1 PFAM: Peptidase family M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: gfo:GFO_3448 M28 family peptidase; PFAM: Peptidase M28; SPTR: Peptidase, M28 family protein; peptidase M28 1770745 11054461 Murru_1635 Muricauda ruestringensis DSM 13258 peptidase M28 YP_004788097.1 1769192 R 886377 CDS YP_004788098.1 344202955 11054462 complement(1771066..1771908) 1 NC_015945.1 PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: rbi:RB2501_05160 PAP2 family protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: PAP2 family protein; phosphoesterase PA-phosphatase-like protein 1771908 11054462 Murru_1636 Muricauda ruestringensis DSM 13258 phosphoesterase PA-phosphatase-like protein YP_004788098.1 1771066 R 886377 CDS YP_004788099.1 344202956 11054463 complement(1771939..1772841) 1 NC_015945.1 PFAM: Histone deacetylase domain; COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: gfo:GFO_3101 histone deacetylase family protein; PFAM: Histone deacetylase superfamily; PRIAM: Histone deacetylase; SPTR: Histone deacetylase superfamily protein; histone deacetylase 1772841 11054463 Murru_1637 Muricauda ruestringensis DSM 13258 histone deacetylase YP_004788099.1 1771939 R 886377 CDS YP_004788100.1 344202957 11054464 complement(1772843..1774975) 1 NC_015945.1 PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; COGs: COG2183 Transcriptional accessory protein; InterProIPR018974:IPR003029:IPR006641:IPR022967:IPR 004509; KEGG: fbc:FB2170_04335 putative RNA binding protein with S1 RNA-binding domain; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA-binding domain; SMART: Resolvase, RNase H-like fold; RNA-binding domain, S1; SPTR: Putative RNA binding protein with S1 RNA-binding domain; TIGRFAM: Competence protein ComEA, helix-hairpin-helix domain; competence protein ComEA 1774975 11054464 Murru_1638 Muricauda ruestringensis DSM 13258 competence protein ComEA YP_004788100.1 1772843 R 886377 CDS YP_004788101.1 344202958 11054465 complement(1775108..1777204) 1 NC_015945.1 PFAM: Anticodon-binding domain; tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase; COGs: COG0143 Methionyl-tRNA synthetase; HAMAP: Methionyl-tRNA synthetase; InterPro IPR015413:IPR002547:IPR014758:IPR004495; KEGG: fbc:FB2170_04330 methionyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding domain; PRIAM: Methionine--tRNA ligase; SPTR: Methionyl-tRNA synthetase; TIGRFAM: Methionyl-tRNA synthetase, class Ia; Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal; methionyl-tRNA synthetase 1777204 11054465 Murru_1639 Muricauda ruestringensis DSM 13258 methionyl-tRNA synthetase YP_004788101.1 1775108 R 886377 CDS YP_004788102.1 344202959 11054466 complement(1777347..1779059) 1 NC_015945.1 PFAM: Protein of unknown function (DUF1501); COGs: COG4102 conserved hypothetical protein; InterPro IPR010869:IPR006311; KEGG: fbc:FB2170_04325 hypothetical protein; PFAM: Protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; hypothetical protein 1779059 11054466 Murru_1640 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788102.1 1777347 R 886377 CDS YP_004788103.1 344202960 11054467 complement(1779070..1780581) 1 NC_015945.1 PFAM: Protein of unknown function (DUF1800); COGs: COG5267 conserved hypothetical protein; InterPro IPR014917; KEGG: rbi:RB2501_05140 putative signal peptide protein; PFAM: Protein of unknown function DUF1800; SPTR: Probable signal peptide protein; hypothetical protein 1780581 11054467 Murru_1641 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788103.1 1779070 R 886377 CDS YP_004788104.1 344202961 11054468 1780748..1781107 1 NC_015945.1 PFAM: Uncharacterised protein family UPF0102; COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; HAMAP: Uncharacterised protein family UPF0102; InterPro IPR003509; KEGG: fbc:FB2170_04315 hypothetical protein; PFAM: Uncharacterised protein family UPF0102; SPTR: UPF0102 protein FB2170_04315; hypothetical protein 1781107 11054468 Murru_1642 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788104.1 1780748 D 886377 CDS YP_004788105.1 344202962 11054469 1781162..1781821 1 NC_015945.1 KEGG: fbc:FB2170_04310 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1781821 11054469 Murru_1643 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788105.1 1781162 D 886377 CDS YP_004788106.1 344202963 11054470 1781894..1783876 1 NC_015945.1 PFAM: Protein of unknown function (DUF3352); KEGG: mtt:Ftrac_3005 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1783876 11054470 Murru_1644 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788106.1 1781894 D 886377 CDS YP_004788107.1 344202964 11054471 1783979..1785190 1 NC_015945.1 PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: fbc:FB2170_05440 hypothetical protein; PFAM: Beta-lactamase-related; SPTR: Putative uncharacterized protein; beta-lactamase 1785190 11054471 Murru_1645 Muricauda ruestringensis DSM 13258 beta-lactamase YP_004788107.1 1783979 D 886377 CDS YP_004788108.1 344202965 11054472 1785221..1785988 1 NC_015945.1 hypothetical protein 1785988 11054472 Murru_1646 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788108.1 1785221 D 886377 CDS YP_004788109.1 344202966 11054473 complement(1785965..1789423) 1 NC_015945.1 PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd); COGs: COG1197 Transcription-repair coupling factor (superfamily II helicase); InterProIPR003711:IPR011545:IPR001650:IPR005118:IPR 014001:IPR004576; KEGG: fbc:FB2170_04290 transcription-repair coupling factor; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Transcription factor CarD; Helicase, C-terminal; Transcription-repair-coupling factor domain; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: Transcription-repair coupling factor; TIGRFAM: Transcription-repair coupling factor; transcription-repair coupling factor 1789423 11054473 Murru_1647 Muricauda ruestringensis DSM 13258 transcription-repair coupling factor YP_004788109.1 1785965 R 886377 CDS YP_004788110.1 344202967 11054474 complement(1789688..1790320) 1 NC_015945.1 PFAM: Calcineurin-like phosphoesterase; TIGRFAM: putative phosphoesterase, SbcD/Mre11-related; COGs: COG1407 ICC-like phosphoesterase; InterPro IPR004843; KEGG: gfo:GFO_3152 phosphoesterase domain-containing protein; PFAM: Metallo-dependent phosphatase; SPTR: Metallophosphoesterase; metallophosphoesterase 1790320 11054474 Murru_1648 Muricauda ruestringensis DSM 13258 metallophosphoesterase YP_004788110.1 1789688 R 886377 CDS YP_004788111.1 344202968 11054475 complement(1790508..1792970) 1 NC_015945.1 PFAM: Helicase conserved C-terminal domain; DEAD/H associated; DEAD/DEAH box helicase; COGs: COG1201 Lhr-like helicase; InterPro IPR011545:IPR001650:IPR013701:IPR014001; KEGG: cat:CA2559_02265 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; PFAM: DEAD/H associated; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; manually curated; DEAD/DEAH box helicase 1792970 11054475 Murru_1649 Muricauda ruestringensis DSM 13258 DEAD/DEAH box helicase YP_004788111.1 1790508 R 886377 CDS YP_004788112.1 344202969 11054476 1793069..1793497 1 NC_015945.1 KEGG: rbi:RB2501_05090 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1793497 11054476 Murru_1650 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788112.1 1793069 D 886377 CDS YP_004788113.1 344202970 11054477 complement(1793494..1794501) 1 NC_015945.1 PFAM: Fructose-1-6-bisphosphatase; COGs: COG0158 Fructose-1 6-bisphosphatase; HAMAP: Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase; InterPro IPR000146; KEGG: fbc:FB2170_04280 fructose-1,6-bisphosphatase; PFAM: Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase; PRIAM: Fructose-bisphosphatase; SPTR: Fructose-1,6-bisphosphatase; fructose-1,6-bisphosphatase class 1 1794501 11054477 Murru_1651 Muricauda ruestringensis DSM 13258 fructose-1,6-bisphosphatase class 1 YP_004788113.1 1793494 R 886377 CDS YP_004788114.1 344202971 11054478 1794613..1795095 1 NC_015945.1 PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: fbc:FB2170_04275 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1795095 11054478 Murru_1652 Muricauda ruestringensis DSM 13258 N-acetyltransferase GCN5 YP_004788114.1 1794613 D 886377 CDS YP_004788115.1 344202972 11054479 1795124..1796374 1 NC_015945.1 PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase; COGs: COG0527 Aspartokinase; InterPro IPR001048:IPR001341; KEGG: fbc:FB2170_04270 aspartate kinase III; PFAM: Aspartate/glutamate/uridylate kinase; SPTR: Aspartokinase; TIGRFAM: Aspartate kinase domain; aspartate kinase 1796374 11054479 Murru_1653 Muricauda ruestringensis DSM 13258 aspartate kinase YP_004788115.1 1795124 D 886377 CDS YP_004788116.1 344202973 11054480 1796453..1798273 1 NC_015945.1 PFAM: Acyltransferase; COGs: COG3176 Putative hemolysin; InterPro IPR002123; KEGG: fbc:FB2170_04265 putative hemolysin; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Putative hemolysin; phospholipid/glycerol acyltransferase 1798273 11054480 Murru_1654 Muricauda ruestringensis DSM 13258 phospholipid/glycerol acyltransferase YP_004788116.1 1796453 D 886377 CDS YP_004788117.1 344202974 11054481 complement(1798270..1798761) 1 NC_015945.1 PFAM: Acetyltransferase (GNAT) family; COGs: COG1247 Sortase and related acyltransferase; InterPro IPR000182; KEGG: fbc:FB2170_04260 phosphinothricin N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Phosphinothricin N-acetyltransferase; N-acetyltransferase GCN5 1798761 11054481 Murru_1655 Muricauda ruestringensis DSM 13258 N-acetyltransferase GCN5 YP_004788117.1 1798270 R 886377 CDS YP_004788118.1 344202975 11054482 complement(1798951..1799340) 1 NC_015945.1 KEGG: lby:Lbys_1638 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1799340 11054482 Murru_1656 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788118.1 1798951 R 886377 CDS YP_004788119.1 344202976 11054483 complement(1799391..1799777) 1 NC_015945.1 KEGG: fbc:FB2170_04240 glyoxalase; SPTR: Glyoxalase; glyoxalase 1799777 11054483 Murru_1657 Muricauda ruestringensis DSM 13258 glyoxalase YP_004788119.1 1799391 R 886377 CDS YP_004788120.1 344202977 11054484 complement(1799767..1800231) 1 NC_015945.1 PFAM: Domain of unknown function (DU1801); InterPro IPR014922; KEGG: fbc:FB2170_04235 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: Putative uncharacterized protein; hypothetical protein 1800231 11054484 Murru_1658 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788120.1 1799767 R 886377 CDS YP_004788121.1 344202978 11054485 complement(1800292..1801224) 1 NC_015945.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: fbc:FB2170_04230 putative dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; PRIAM: Phosphoglycerate dehydrogenase; SPTR: Predicted dehydrogenase; phosphoglycerate dehydrogenase 1801224 11054485 Murru_1659 Muricauda ruestringensis DSM 13258 phosphoglycerate dehydrogenase YP_004788121.1 1800292 R 886377 CDS YP_004788122.1 344202979 11054486 complement(1801244..1801609) 1 NC_015945.1 PFAM: Cupin domain; InterPro IPR013096; KEGG: fbc:FB2170_04225 hypothetical protein; PFAM: Cupin 2, conserved barrel; SPTR: Putative uncharacterized protein; cupin 2 barrel domain-containing protein 1801609 11054486 Murru_1660 Muricauda ruestringensis DSM 13258 cupin 2 barrel domain-containing protein YP_004788122.1 1801244 R 886377 CDS YP_004788123.1 344202980 11054487 complement(1801623..1801988) 1 NC_015945.1 PFAM: SnoaL-like polyketide cyclase; InterPro IPR009959; KEGG: dsa:Desal_1939 protein of unknown function DUF1486; PFAM: Protein of unknown function DUF1486; SPTR: Putative uncharacterized protein; hypothetical protein 1801988 11054487 Murru_1661 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788123.1 1801623 R 886377 CDS YP_004788124.1 344202981 11054488 complement(1802014..1803366) 1 NC_015945.1 PFAM: MgtE intracellular N domain; CBS domain; Divalent cation transporter; TIGRFAM: Mg2+ transporter (mgtE); COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); InterPro IPR006668:IPR000644:IPR006667:IPR006669; KEGG: fbc:FB2170_04220 magnesium transporter; PFAM: MgtE magnesium transporter, integral membrane; Magnesium transporter, MgtE intracellular domain; Cystathionine beta-synthase, core; SMART: Magnesium transporter, MgtE intracellular domain; Cystathionine beta-synthase, core; SPTR: Magnesium transporter; TIGRFAM: Divalent cation transporter; magnesium transporter 1803366 11054488 Murru_1662 Muricauda ruestringensis DSM 13258 magnesium transporter YP_004788124.1 1802014 R 886377 CDS YP_004788125.1 344202982 11054489 complement(1803353..1804225) 1 NC_015945.1 PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase; COGs: COG0030 Dimethyladenosine transferase (rRNA methylation); HAMAP: Ribosomal RNA adenine dimethylase; InterPro IPR001737:IPR020598:IPR011530; KEGG: fbc:FB2170_04215 dimethyladenosine transferase; PFAM: Ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase, N-terminal; SPTR: Dimethyladenosine transferase; TIGRFAM: Ribosomal RNA adenine dimethylase; ribosomal RNA small subunit methyltransferase A 1804225 11054489 Murru_1663 Muricauda ruestringensis DSM 13258 ribosomal RNA small subunit methyltransferase A YP_004788125.1 1803353 R 886377 CDS YP_004788126.1 344202983 11054490 complement(1804244..1804552) 1 NC_015945.1 PFAM: AIG2-like family; InterPro IPR009288; KEGG: fjo:Fjoh_4897 hypothetical protein; PFAM: AIG2-like; SPTR: Putative uncharacterized protein; AIG2 family protein 1804552 11054490 Murru_1664 Muricauda ruestringensis DSM 13258 AIG2 family protein YP_004788126.1 1804244 R 886377 CDS YP_004788127.1 344202984 11054491 complement(1804556..1804873) 1 NC_015945.1 KEGG: fbc:FB2170_04210 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1804873 11054491 Murru_1665 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788127.1 1804556 R 886377 CDS YP_004788128.1 344202985 11054492 complement(1805025..1806782) 1 NC_015945.1 InterPro IPR001440:IPR019734; KEGG: fbc:FB2170_04205 tetratricopeptide repeat domain-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: Tetratricopeptide repeat domain protein; hypothetical protein 1806782 11054492 Murru_1666 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788128.1 1805025 R 886377 CDS YP_004788129.1 344202986 11054493 complement(1806887..1808158) 1 NC_015945.1 PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase; COGs: COG0172 Seryl-tRNA synthetase; InterPro IPR015866:IPR002314:IPR002317; KEGG: fbc:FB2170_04200 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synthetase, class IIa, N-terminal; PRIAM: Serine--tRNA ligase; SPTR: Seryl-tRNA synthetase; TIGRFAM: Seryl-tRNA synthetase, class IIa; seryl-tRNA synthetase 1808158 11054493 Murru_1667 Muricauda ruestringensis DSM 13258 seryl-tRNA synthetase YP_004788129.1 1806887 R 886377 CDS YP_004788130.1 344202987 11054494 complement(1808209..1809525) 1 NC_015945.1 PFAM: Vitamin K-dependent gamma-carboxylase; InterPro IPR007782:IPR011020; KEGG: fbc:FB2170_04190 gamma-glutamyl carboxylase-like protein; PFAM: Vitamin K-dependent gamma-carboxylase; SMART: HTTM; SPTR: Gamma-glutamyl carboxylase-like protein; Vitamin K-dependent gamma-carboxylase 1809525 11054494 Murru_1668 Muricauda ruestringensis DSM 13258 Vitamin K-dependent gamma-carboxylase YP_004788130.1 1808209 R 886377 CDS YP_004788131.1 344202988 11054495 complement(1809526..1810455) 1 NC_015945.1 PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; COGs: COG0196 FAD synthase; InterPro IPR015864:IPR015865:IPR002606; KEGG: fbc:FB2170_04185 riboflavin kinase / FAD synthetase; PFAM: Riboflavin kinase; FAD synthetase; PRIAM: FAD synthetase., Riboflavin kinase; SMART: Riboflavin kinase; SPTR: Riboflavin kinase / FAD synthetase; TIGRFAM: Riboflavin kinase/FAD synthetase; riboflavin biosynthesis protein RibF 1810455 11054495 Murru_1669 Muricauda ruestringensis DSM 13258 riboflavin biosynthesis protein RibF YP_004788131.1 1809526 R 886377 CDS YP_004788132.1 344202989 11054496 1810513..1814307 1 NC_015945.1 PFAM: Developmentally Regulated MAPK Interacting Protein; Proprotein convertase P-domain; InterPro IPR002884; KEGG: fbc:FB2170_04180 hypothetical protein; PFAM: Proprotein convertase, P; SPTR: Putative uncharacterized protein; Proprotein convertase P 1814307 11054496 Murru_1670 Muricauda ruestringensis DSM 13258 Proprotein convertase P YP_004788132.1 1810513 D 886377 CDS YP_004788133.1 344202990 11054497 1814304..1814990 1 NC_015945.1 KEGG: fbc:FB2170_04175 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1814990 11054497 Murru_1671 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788133.1 1814304 D 886377 CDS YP_004788134.1 344202991 11054498 complement(1814992..1815621) 1 NC_015945.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; COGs: COG0193 Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; InterPro IPR001328; KEGG: fbc:FB2170_04170 peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; PRIAM: Aminoacyl-tRNA hydrolase; SPTR: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 1815621 11054498 Murru_1672 Muricauda ruestringensis DSM 13258 peptidyl-tRNA hydrolase YP_004788134.1 1814992 R 886377 CDS YP_004788135.1 344202992 11054499 complement(1815709..1816362) 1 NC_015945.1 PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form; COGs: COG1825 Ribosomal protein L25 (general stress protein Ctc); HAMAP: Ribosomal protein L25, long-form; InterPro IPR020055:IPR001021; KEGG: fbc:FB2170_04165 putative ribosomal L25p family stress protein; PFAM: Ribosomal protein L25, short-form; SPTR: 50S ribosomal protein L25; TIGRFAM: Ribosomal protein L25, long-form; 50S ribosomal protein L25 1816362 11054499 Murru_1673 Muricauda ruestringensis DSM 13258 50S ribosomal protein L25 YP_004788135.1 1815709 R 886377 CDS YP_004788136.1 344202993 11054500 complement(1816469..1817410) 1 NC_015945.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR000836:IPR005946; KEGG: fbc:FB2170_04160 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: Ribose-phosphate pyrophosphokinase; TIGRFAM: Phosphoribosyl pyrophosphokinase; ribose-phosphate pyrophosphokinase 1817410 11054500 Murru_1674 Muricauda ruestringensis DSM 13258 ribose-phosphate pyrophosphokinase YP_004788136.1 1816469 R 886377 CDS YP_004788137.1 344202994 11054502 complement(1817833..1818009) 1 NC_015945.1 hypothetical protein 1818009 11054502 Murru_1675 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788137.1 1817833 R 886377 CDS YP_004788138.1 344202995 11054503 1818483..1819757 1 NC_015945.1 PFAM: ATP cone domain; Ribonucleotide reductase, small chain; COGs: COG0208 Ribonucleotide reductase beta subunit; InterPro IPR005144:IPR000358; KEGG: srm:SRM_00153 ribonucleoside-diphosphate reductase beta subunit; PFAM: ATP-cone; Ribonucleotide reductase; SPTR: Ribonucleoside-diphosphate reductase, beta subunit 1; ATP-cone domain-containing protein 1819757 11054503 Murru_1676 Muricauda ruestringensis DSM 13258 ATP-cone domain-containing protein YP_004788138.1 1818483 D 886377 CDS YP_004788139.1 344202996 11054504 1819761..1821551 1 NC_015945.1 PFAM: Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha chain; InterPro IPR013509:IPR000788:IPR013350; KEGG: hla:Hlac_2944 ribonucleotide-diphosphate reductase subunit alpha; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; PRIAM: Ribonucleoside-diphosphate reductase; SPTR: Ribonucleotide-diphosphate reductase alpha subunit; TIGRFAM: Ribonucleoside-diphosphate reductase alpha chain; ribonucleoside-diphosphate reductase subunit alpha 1821551 11054504 Murru_1677 Muricauda ruestringensis DSM 13258 ribonucleoside-diphosphate reductase subunit alpha YP_004788139.1 1819761 D 886377 CDS YP_004788140.1 344202997 11054505 complement(1821638..1821811) 1 NC_015945.1 hypothetical protein 1821811 11054505 Murru_1678 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788140.1 1821638 R 886377 CDS YP_004788141.1 344202998 11054506 1821869..1825210 1 NC_015945.1 PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain; InterPro IPR001434; KEGG: fjo:Fjoh_3971 hypothetical protein; PFAM: Domain of unknown function DUF11; SPTR: Conserved repeat domain protein; TIGRFAM: Domain of unknown function DUF11; hypothetical protein 1825210 11054506 Murru_1679 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788141.1 1821869 D 886377 CDS YP_004788142.1 344202999 11054507 1825213..1826154 1 NC_015945.1 PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: fjo:Fjoh_3972 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein 1826154 11054507 Murru_1680 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788142.1 1825213 D 886377 CDS YP_004788143.1 344203000 11054508 1826258..1826839 1 NC_015945.1 TIGRFAM: siroheme synthase, N-terminal domain; COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); InterPro IPR006367; KEGG: gfo:GFO_0329 siroheme synthase; SPTR: Siroheme synthase (Precorrin-2 oxidase); TIGRFAM: Sirohaem synthase, N-terminal; siroheme synthase 1826839 11054508 Murru_1681 Muricauda ruestringensis DSM 13258 siroheme synthase YP_004788143.1 1826258 D 886377 CDS YP_004788144.1 344203001 11054509 complement(1826961..1827713) 1 NC_015945.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: dfe:Dfer_1279 two component transcriptional regulator, LytTR family; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Response regulator; LytTR family two component transcriptional regulator 1827713 11054509 Murru_1682 Muricauda ruestringensis DSM 13258 LytTR family two component transcriptional regulator YP_004788144.1 1826961 R 886377 CDS YP_004788145.1 344203002 11054510 complement(1827724..1829649) 1 NC_015945.1 PFAM: Histidine kinase; 7TM diverse intracellular signalling; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559:IPR003594; KEGG: fba:FIC_00181 sensor histidine kinase; PFAM: Signal transduction histidine kinase, internal region; ATPase-like, ATP-binding domain; SPTR: Possible sensor protein; putative signal transduction histidine kinase 1829649 11054510 Murru_1683 Muricauda ruestringensis DSM 13258 putative signal transduction histidine kinase YP_004788145.1 1827724 R 886377 CDS YP_004788146.1 344203003 11054511 complement(1830522..1831196) 1 NC_015945.1 hypothetical protein 1831196 11054511 Murru_1684 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788146.1 1830522 R 886377 CDS YP_004788147.1 344203004 11054512 complement(1831406..1831780) 1 NC_015945.1 hypothetical protein 1831780 11054512 Murru_1685 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788147.1 1831406 R 886377 CDS YP_004788148.1 344203005 11054513 complement(1832009..1833019) 1 NC_015945.1 KEGG: sus:Acid_4398 dienelactone hydrolase; SPTR: Dienelactone hydrolase; hypothetical protein 1833019 11054513 Murru_1686 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788148.1 1832009 R 886377 CDS YP_004788149.1 344203006 11054514 complement(1833038..1833988) 1 NC_015945.1 PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: rbi:RB2501_06875 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein 1833988 11054514 Murru_1687 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788149.1 1833038 R 886377 CDS YP_004788150.1 344203007 11054515 complement(1834000..1837440) 1 NC_015945.1 KEGG: fbc:FB2170_05945 putative hemagglutinin/hemolysin-like protein; SPTR: Putative hemagglutinin/hemolysin-related protein; hypothetical protein 1837440 11054515 Murru_1688 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788150.1 1834000 R 886377 CDS YP_004788151.1 344203008 11054516 complement(1837804..1839945) 1 NC_015945.1 PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR003367:IPR006665; KEGG: fps:FP1920 OmpA family outer membrane protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Thrombospondin, type 3-like repeat; SPTR: Probable outer membrane protein, OmpA family; OmpA/MotB domain-containing protein 1839945 11054516 Murru_1689 Muricauda ruestringensis DSM 13258 OmpA/MotB domain-containing protein YP_004788151.1 1837804 R 886377 CDS YP_004788152.1 344203009 11054517 complement(1840540..1840872) 1 NC_015945.1 PFAM: Domain of unknown function (DUF1508); COGs: COG3422 conserved hypothetical protein; InterPro IPR010879; KEGG: rbi:RB2501_10572 hypothetical protein; PFAM: Domain of unknown function DUF1508; SPTR: Putative uncharacterized protein; hypothetical protein 1840872 11054517 Murru_1690 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788152.1 1840540 R 886377 CDS YP_004788153.1 344203010 11054518 complement(1841056..1842255) 1 NC_015945.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase; COGs: COG0014 Gamma-glutamyl phosphate reductase; InterPro IPR000965; KEGG: cat:CA2559_12653 hypothetical protein; PRIAM: Glutamate-5-semialdehyde dehydrogenase; SPTR: Gamma-glutamyl phosphate reductase; TIGRFAM: Gamma-glutamyl phosphate reductase GPR; manually curated; gamma-glutamyl phosphate reductase 1842255 11054518 Murru_1691 Muricauda ruestringensis DSM 13258 gamma-glutamyl phosphate reductase YP_004788153.1 1841056 R 886377 CDS YP_004788154.1 344203011 11054519 complement(1842255..1843031) 1 NC_015945.1 PFAM: Amino acid kinase family; TIGRFAM: glutamate 5-kinase; COGs: COG0263 Glutamate 5-kinase; InterPro IPR001048; KEGG: rbi:RB2501_13504 gamma-glutamyl kinase; PFAM: Aspartate/glutamate/uridylate kinase; PRIAM: Glutamate 5-kinase; SPTR: Gamma-glutamyl kinase; glutamate 5-kinase 1843031 11054519 Murru_1692 Muricauda ruestringensis DSM 13258 glutamate 5-kinase YP_004788154.1 1842255 R 886377 CDS YP_004788155.1 344203012 11054520 complement(1843035..1843841) 1 NC_015945.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR004455:IPR000304; KEGG: zpr:ZPR_2279 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; PRIAM: Pyrroline-5-carboxylate reductase; SPTR: Pyrroline-5-carboxylate reductase; TIGRFAM: Pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 1843841 11054520 Murru_1693 Muricauda ruestringensis DSM 13258 pyrroline-5-carboxylate reductase YP_004788155.1 1843035 R 886377 CDS YP_004788156.1 344203013 11054521 complement(1843877..1844068) 1 NC_015945.1 KEGG: rbi:RB2501_03410 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1844068 11054521 Murru_1694 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788156.1 1843877 R 886377 CDS YP_004788157.1 344203014 11054522 complement(1844099..1844296) 1 NC_015945.1 PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; HAMAP: Ribosomal protein S21; InterPro IPR001911; KEGG: zpr:ZPR_1153 30S ribosomal protein S21; SPTR: Putative ribosomal protein S21; TIGRFAM: Ribosomal protein S21; 30S ribosomal protein S21 1844296 11054522 Murru_1695 Muricauda ruestringensis DSM 13258 30S ribosomal protein S21 YP_004788157.1 1844099 R 886377 CDS YP_004788158.1 344203015 11054523 complement(1844305..1844748) 1 NC_015945.1 InterPro IPR000182; KEGG: mtt:Ftrac_3253 gcn5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Putative uncharacterized protein; N-acetyltransferase GCN5 1844748 11054523 Murru_1696 Muricauda ruestringensis DSM 13258 N-acetyltransferase GCN5 YP_004788158.1 1844305 R 886377 CDS YP_004788159.1 344203016 11054524 complement(1845421..1846515) 1 NC_015945.1 PFAM: Protein of unknown function (DUF1624); KEGG: fbc:FB2170_12486 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1846515 11054524 Murru_1697 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788159.1 1845421 R 886377 CDS YP_004788160.1 344203017 11054525 complement(1846769..1847566) 1 NC_015945.1 PFAM: Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792; KEGG: gfo:GFO_3486 LuxR family transcriptional regulator protein; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: LuxR family transcriptional regulator protein; LuxR family transcriptional regulator 1847566 11054525 Murru_1698 Muricauda ruestringensis DSM 13258 LuxR family transcriptional regulator YP_004788160.1 1846769 R 886377 CDS YP_004788161.1 344203018 11054526 1847730..1849319 1 NC_015945.1 KEGG: ssl:SS1G_10991 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1849319 11054526 Murru_1699 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788161.1 1847730 D 886377 CDS YP_004788162.1 344203019 11054527 1849333..1850541 1 NC_015945.1 PFAM: MORN repeat variant; InterPro IPR011652; KEGG: mtt:Ftrac_1184 MORN variant repeat-containing protein; PFAM: MORN variant; SPTR: Hypothetical exported 24-amino acid repeat protein; MORN repeat-containing protein 1850541 11054527 Murru_1700 Muricauda ruestringensis DSM 13258 MORN repeat-containing protein YP_004788162.1 1849333 D 886377 CDS YP_004788163.1 344203020 11054528 complement(1850675..1851598) 1 NC_015945.1 PFAM: Bacterial regulatory proteins, luxR family; PAS fold; TIGRFAM: PAS domain S-box; InterPro IPR013655:IPR000014; KEGG: cpi:Cpin_1033 TPR repeat-containing protein; PFAM: PAS fold-3; SMART: PAS; SPTR: Tetratricopeptide repeat domain protein; TIGRFAM: PAS; PAS sensor protein 1851598 11054528 Murru_1701 Muricauda ruestringensis DSM 13258 PAS sensor protein YP_004788163.1 1850675 R 886377 CDS YP_004788164.1 344203021 11054529 1852039..1853262 1 NC_015945.1 hypothetical protein 1853262 11054529 Murru_1702 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788164.1 1852039 D 886377 CDS YP_004788165.1 344203022 11054530 1853365..1854009 1 NC_015945.1 hypothetical protein 1854009 11054530 Murru_1703 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788165.1 1853365 D 886377 CDS YP_004788166.1 344203023 11054531 1854094..1855551 1 NC_015945.1 PFAM: Amidohydrolase family; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR013108; KEGG: kko:Kkor_2183 amidohydrolase; PFAM: Amidohydrolase 3; SPTR: Amidohydrolase family protein; amidohydrolase 1855551 11054531 Murru_1704 Muricauda ruestringensis DSM 13258 amidohydrolase YP_004788166.1 1854094 D 886377 CDS YP_004788167.1 344203024 11054532 1855614..1857422 1 NC_015945.1 PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: phe:Phep_3062 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase 1857422 11054532 Murru_1705 Muricauda ruestringensis DSM 13258 beta-lactamase YP_004788167.1 1855614 D 886377 CDS YP_004788168.1 344203025 11054533 1857578..1858606 1 NC_015945.1 PFAM: Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; COGs: COG4927 choloylglycine hydrolase; InterPro IPR005079; KEGG: bcz:pE33L466_0332 choloylglycine hydrolase; PFAM: Peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; SPTR: Choloylglycine hydrolase; peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 1858606 11054533 Murru_1706 Muricauda ruestringensis DSM 13258 peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase YP_004788168.1 1857578 D 886377 CDS YP_004788169.1 344203026 11054534 1858612..1859541 1 NC_015945.1 PFAM: Polysaccharide deacetylase; InterPro IPR002509; KEGG: mtt:Ftrac_3433 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase domain protein; polysaccharide deacetylase 1859541 11054534 Murru_1707 Muricauda ruestringensis DSM 13258 polysaccharide deacetylase YP_004788169.1 1858612 D 886377 CDS YP_004788170.1 344203027 11054535 1859604..1861307 1 NC_015945.1 PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: gau:GAU_3453 beta-lactamase family protein; PFAM: Beta-lactamase-related; SPTR: Putative 6-aminohexanoate-dimer hydrolase; beta-lactamase 1861307 11054535 Murru_1708 Muricauda ruestringensis DSM 13258 beta-lactamase YP_004788170.1 1859604 D 886377 CDS YP_004788171.1 344203028 11054536 1861344..1862045 1 NC_015945.1 KEGG: gfo:GFO_3458 secreted protein; SPTR: Putative uncharacterized protein; hypothetical protein 1862045 11054536 Murru_1709 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788171.1 1861344 D 886377 CDS YP_004788172.1 344203029 11054537 1862060..1863274 1 NC_015945.1 PFAM: FG-GAP repeat; InterPro IPR013517; KEGG: rba:RB105 cysteine proteinase; PFAM: FG-GAP; SPTR: Probable cysteine proteinase; FG-GAP repeat-containing protein 1863274 11054537 Murru_1710 Muricauda ruestringensis DSM 13258 FG-GAP repeat-containing protein YP_004788172.1 1862060 D 886377 CDS YP_004788173.1 344203030 11054538 complement(1863652..1866879) 1 NC_015945.1 PFAM: N-6 DNA Methylase; COGs: COG4889 helicase; KEGG: fba:FIC_01029 adenine specific DNA methyltransferase; SPTR: Adenine specific DNA methyltransferase; adenine specific DNA methyltransferase 1866879 11054538 Murru_1711 Muricauda ruestringensis DSM 13258 adenine specific DNA methyltransferase YP_004788173.1 1863652 R 886377 CDS YP_004788174.1 344203031 11054540 complement(1867392..1868321) 1 NC_015945.1 PFAM: Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: fbc:FB2170_03940 hypothetical protein; PFAM: Domain of unknown function DUF58; SPTR: Putative uncharacterized protein; hypothetical protein 1868321 11054540 Murru_1712 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788174.1 1867392 R 886377 CDS YP_004788175.1 344203032 11054541 complement(1868533..1868850) 1 NC_015945.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766:IPR005746; KEGG: fbc:FB2170_03945 thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin; TIGRFAM: Thioredoxin; thioredoxin 1868850 11054541 Murru_1713 Muricauda ruestringensis DSM 13258 thioredoxin YP_004788175.1 1868533 R 886377 CDS YP_004788176.1 344203033 11054542 complement(1868953..1873338) 1 NC_015945.1 PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; Exonuclease; TIGRFAM: DNA-directed DNA polymerase III (polc); COGs: COG0587 DNA polymerase III alpha subunit; InterProIPR013520:IPR004013:IPR011708:IPR004365:IPR 006055:IPR003141:IPR004805; KEGG: zpr:ZPR_4431 DNA polymerase III subunit alpha-1; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Exonuclease, RNase T/DNA polymerase III; Nucleic acid binding, OB-fold, tRNA/helicase-type; PRIAM: DNA-directed DNA polymerase; SMART: Polymerase/histidinol phosphatase, N-terminal; Exonuclease; SPTR: DNA polymerase III subunit alpha-1; TIGRFAM: DNA polymerase III, alpha subunit; DNA polymerase III subunit alpha 1873338 11054542 Murru_1714 Muricauda ruestringensis DSM 13258 DNA polymerase III subunit alpha YP_004788176.1 1868953 R 886377 CDS YP_004788177.1 344203034 11054543 complement(1873484..1873939) 1 NC_015945.1 PFAM: Domain of unknown function (DUF2383); TIGRFAM: conserved hypothetical protein; InterPro IPR019052:IPR011971; KEGG: rbi:RB2501_04250 hypothetical protein; PFAM: Domain of unknown function DUF2383; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02284; hypothetical protein 1873939 11054543 Murru_1715 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788177.1 1873484 R 886377 CDS YP_004788178.1 344203035 11054544 1874204..1874785 1 NC_015945.1 PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; COGs: COG0228 Ribosomal protein S16; HAMAP: Ribosomal protein S16; InterPro IPR000307; KEGG: gfo:GFO_3030 30S ribosomal protein S16; PFAM: Ribosomal protein S16; SPTR: 30S ribosomal protein S16; TIGRFAM: Ribosomal protein S16; 30S ribosomal protein S16 1874785 11054544 Murru_1716 Muricauda ruestringensis DSM 13258 30S ribosomal protein S16 YP_004788178.1 1874204 D 886377 CDS YP_004788179.1 344203036 11054545 1874798..1875325 1 NC_015945.1 PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM; COGs: COG0806 RimM protein required for 16S rRNA processing; HAMAP: 16S rRNA processing protein RimM; InterPro IPR007903:IPR011961; KEGG: fbc:FB2170_03965 16S rRNA-processing protein; PFAM: PRC-barrel; SPTR: Ribosome maturation factor rimM; TIGRFAM: 16S rRNA processing protein RimM; ribosome maturation factor rimM 1875325 11054545 Murru_1717 Muricauda ruestringensis DSM 13258 ribosome maturation factor rimM YP_004788179.1 1874798 D 886377 CDS YP_004788180.1 344203037 11054546 complement(1875471..1875974) 1 NC_015945.1 KEGG: bfs:BF3160 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1875974 11054546 Murru_1718 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788180.1 1875471 R 886377 CDS YP_004788181.1 344203038 11054547 1876141..1876875 1 NC_015945.1 PFAM: Methyltransferase small domain; COGs: COG4123 O-methyltransferase; InterPro IPR007848; KEGG: fbc:FB2170_03980 hypothetical protein; PFAM: Methyltransferase small; SPTR: tRNA (adenine-N(6)-)-methyltransferase; methyltransferase small 1876875 11054547 Murru_1719 Muricauda ruestringensis DSM 13258 methyltransferase small YP_004788181.1 1876141 D 886377 CDS YP_004788182.1 344203039 11054548 1877031..1878209 1 NC_015945.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: fbc:FB2170_04000 acyl-CoA dehydrogenase-like protein; PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA oxidase/dehydrogenase, type 1; PRIAM: Glutaryl-CoA dehydrogenase; SPTR: Acyl-CoA dehydrogenase-like protein; glutaryl-CoA dehydrogenase 1878209 11054548 Murru_1720 Muricauda ruestringensis DSM 13258 glutaryl-CoA dehydrogenase YP_004788182.1 1877031 D 886377 CDS YP_004788183.1 344203040 11054549 complement(1878223..1880523) 1 NC_015945.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006656:IPR006657:IPR010046; KEGG: fbc:FB2170_04020 oxidoreductase alpha (molybdopterin) subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding domain; PRIAM: Nitrate reductase; SPTR: Oxidoreductase alpha (Molybdopterin) subunit; TIGRFAM: Oxidoreductase alpha (molybdopterin) subunit; oxidoreductase alpha (molybdopterin) subunit 1880523 11054549 Murru_1721 Muricauda ruestringensis DSM 13258 oxidoreductase alpha (molybdopterin) subunit YP_004788183.1 1878223 R 886377 CDS YP_004788184.1 344203041 11054550 1880667..1881926 1 NC_015945.1 PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; InterPro IPR001126; KEGG: fps:FP0389 UmuC protein; PFAM: DNA-repair protein, UmuC-like; PRIAM: DNA-directed DNA polymerase; SPTR: Nucleotidyltransferase/DNA polymerase involved in DNA repair; DNA-directed DNA polymerase 1881926 11054550 Murru_1722 Muricauda ruestringensis DSM 13258 DNA-directed DNA polymerase YP_004788184.1 1880667 D 886377 CDS YP_004788185.1 344203042 11054551 1881923..1882372 1 NC_015945.1 PFAM: Peptidase S24-like; COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase); InterPro IPR019759; KEGG: fjo:Fjoh_1967 putative prophage repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Putative UmuD/RumA DNA repair protein; peptidase S24/S26A/S26B 1882372 11054551 Murru_1723 Muricauda ruestringensis DSM 13258 peptidase S24/S26A/S26B YP_004788185.1 1881923 D 886377 CDS YP_004788186.1 344203043 11054552 complement(1883169..1884140) 1 NC_015945.1 PFAM: Arginase family; TIGRFAM: formimidoylglutamase; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; HAMAP: Formiminoglutamase; InterPro IPR006035:IPR005923; KEGG: fbc:FB2170_03650 formiminoglutamase; PFAM: Ureohydrolase; PRIAM: Formimidoylglutamase; SPTR: Formimidoylglutamase; TIGRFAM: Formiminoglutamase; Formimidoylglutamase 1884140 11054552 Murru_1724 Muricauda ruestringensis DSM 13258 Formimidoylglutamase YP_004788186.1 1883169 R 886377 CDS YP_004788187.1 344203044 11054553 complement(1884145..1886148) 1 NC_015945.1 PFAM: Urocanase; TIGRFAM: urocanate hydratase; COGs: COG2987 Urocanate hydratase; InterPro IPR000193; KEGG: fbc:FB2170_03630 urocanate hydratase; PFAM: Urocanase; PRIAM: Urocanate hydratase; SPTR: Urocanate hydratase; urocanate hydratase 1886148 11054553 Murru_1725 Muricauda ruestringensis DSM 13258 urocanate hydratase YP_004788187.1 1884145 R 886377 CDS YP_004788188.1 344203045 11054554 complement(1886160..1887386) 1 NC_015945.1 PFAM: Amidohydrolase family; TIGRFAM: imidazolonepropionase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680:IPR005920; KEGG: fbc:FB2170_03625 imidazolonepropionase; PFAM: Amidohydrolase 1; PRIAM: Imidazolonepropionase; SPTR: Imidazolonepropionase; TIGRFAM: Imidazolonepropionase; imidazolonepropionase 1887386 11054554 Murru_1726 Muricauda ruestringensis DSM 13258 imidazolonepropionase YP_004788188.1 1886160 R 886377 CDS YP_004788189.1 344203046 11054555 complement(1887388..1888965) 1 NC_015945.1 PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; COGs: COG2986 Histidine ammonia-lyase; InterPro IPR001106:IPR005921; KEGG: fbc:FB2170_03620 histidine ammonia-lyase; PFAM: Phenylalanine/histidine ammonia-lyase; PRIAM: Histidine ammonia-lyase; SPTR: Histidine ammonia-lyase; TIGRFAM: Histidine ammonia-lyase; histidine ammonia-lyase 1888965 11054555 Murru_1727 Muricauda ruestringensis DSM 13258 histidine ammonia-lyase YP_004788189.1 1887388 R 886377 CDS YP_004788190.1 344203047 11054556 1889040..1889927 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: fbc:FB2170_03615 als operon regulatory protein AlsR; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; SPTR: Als operon regulatory protein AlsR, putative; LysR family transcriptional regulator 1889927 11054556 Murru_1728 Muricauda ruestringensis DSM 13258 LysR family transcriptional regulator YP_004788190.1 1889040 D 886377 CDS YP_004788191.1 344203048 11054557 1890117..1890671 1 NC_015945.1 PFAM: Nitroreductase family; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: rbi:RB2501_04095 hypothetical protein; PFAM: Nitroreductase-like; SPTR: Putative uncharacterized protein; nitroreductase 1890671 11054557 Murru_1729 Muricauda ruestringensis DSM 13258 nitroreductase YP_004788191.1 1890117 D 886377 CDS YP_004788192.1 344203049 11054558 complement(1890668..1891180) 1 NC_015945.1 PFAM: Protein of unknown function (DUF456); COGs: COG2839 conserved hypothetical protein; InterPro IPR007403; KEGG: fbc:FB2170_03610 hypothetical protein; PFAM: Protein of unknown function DUF456; SPTR: Putative uncharacterized protein; hypothetical protein 1891180 11054558 Murru_1730 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788192.1 1890668 R 886377 CDS YP_004788193.1 344203050 11054559 1891295..1891735 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 1891735 11054559 Murru_1731 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788193.1 1891295 D 886377 CDS YP_004788194.1 344203051 11054560 1891910..1894135 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: cat:CA2559_04680 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; TonB-dependent receptor 1894135 11054560 Murru_1732 Muricauda ruestringensis DSM 13258 TonB-dependent receptor YP_004788194.1 1891910 D 886377 CDS YP_004788195.1 344203052 11054561 1894446..1894808 1 NC_015945.1 PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: fbc:FB2170_03605 putative antibiotic resistance-related regulatory protein; PFAM: Penicillinase repressor; SPTR: Putative antibiotic resistance-related regulatory protein; CopY family transcriptional repressor 1894808 11054561 Murru_1733 Muricauda ruestringensis DSM 13258 CopY family transcriptional repressor YP_004788195.1 1894446 D 886377 CDS YP_004788196.1 344203053 11054562 1894805..1896733 1 NC_015945.1 PFAM: BlaR1 peptidase M56; Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR008756:IPR006260; KEGG: fbc:FB2170_03600 TonB; PFAM: Peptidase M56, BlaR1; TonB, C-terminal; SPTR: TonB; TIGRFAM: TonB, C-terminal; TonB family protein 1896733 11054562 Murru_1734 Muricauda ruestringensis DSM 13258 TonB family protein YP_004788196.1 1894805 D 886377 CDS YP_004788197.1 344203054 11054563 1896755..1897900 1 NC_015945.1 InterPro IPR001440:IPR019734; KEGG: fbc:FB2170_03595 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: TPR repeat protein:HAT (Half-A-TPR) repeat; hypothetical protein 1897900 11054563 Murru_1735 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788197.1 1896755 D 886377 CDS YP_004788198.1 344203055 11054564 1897945..1898424 1 NC_015945.1 KEGG: fbc:FB2170_03585 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1898424 11054564 Murru_1736 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788198.1 1897945 D 886377 CDS YP_004788199.1 344203056 11054565 1898426..1898977 1 NC_015945.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; COGs: COG0817 Holliday junction resolvasome endonuclease subunit; HAMAP: Crossover junction endodeoxyribonuclease RuvC; InterPro IPR002176; KEGG: fbc:FB2170_03580 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC; PRIAM: Crossover junction endodeoxyribonuclease; SPTR: Crossover junction endodeoxyribonuclease ruvC; TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; Crossover junction endodeoxyribonuclease ruvC 1898977 11054565 Murru_1737 Muricauda ruestringensis DSM 13258 Crossover junction endodeoxyribonuclease ruvC YP_004788199.1 1898426 D 886377 CDS YP_004788200.1 344203057 11054566 1899075..1900223 1 NC_015945.1 PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR007197:IPR010723:IPR006638:IPR004559; KEGG: fjo:Fjoh_1376 putative oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Coproporphyrinogen III oxidase; TIGRFAM: Putative oxygen-independent coproporphyrinogen III oxidase; oxygen-independent coproporphyrinogen III oxidase 1900223 11054566 Murru_1738 Muricauda ruestringensis DSM 13258 oxygen-independent coproporphyrinogen III oxidase YP_004788200.1 1899075 D 886377 CDS YP_004788201.1 344203058 11054567 1900307..1901059 1 NC_015945.1 PFAM: Putative cyclase; KEGG: fbc:FB2170_03570 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1901059 11054567 Murru_1739 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788201.1 1900307 D 886377 CDS YP_004788202.1 344203059 11054568 1901060..1901419 1 NC_015945.1 KEGG: fbc:FB2170_03560 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1901419 11054568 Murru_1740 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788202.1 1901060 D 886377 CDS YP_004788203.1 344203060 11054569 1901412..1902035 1 NC_015945.1 KEGG: fbc:FB2170_03555 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1902035 11054569 Murru_1741 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788203.1 1901412 D 886377 CDS YP_004788204.1 344203061 11054570 1902038..1902439 1 NC_015945.1 PFAM: Stress responsive A/B Barrel Domain; InterPro IPR013097; KEGG: rbi:RB2501_04055 hypothetical protein; PFAM: Stress responsive alpha-beta barrel; SMART: Stress responsive alpha-beta barrel; SPTR: Putative uncharacterized protein; stress responsive alpha-beta barrel domain-containing protein 1902439 11054570 Murru_1742 Muricauda ruestringensis DSM 13258 stress responsive alpha-beta barrel domain-containing protein YP_004788204.1 1902038 D 886377 CDS YP_004788205.1 344203062 11054571 1902436..1902795 1 NC_015945.1 PFAM: Protein of unknown function (DUF419); COGs: COG2315 conserved hypothetical protein; InterPro IPR007351; KEGG: fbc:FB2170_03545 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1902795 11054571 Murru_1743 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788205.1 1902436 D 886377 CDS YP_004788206.1 344203063 11054572 1902803..1904572 1 NC_015945.1 PFAM: MutS domain V; COGs: COG0249 Mismatch repair ATPase (MutS family); InterPro IPR000432; KEGG: fbc:FB2170_03535 DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS, C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal; SPTR: DNA mismatch repair protein mutS; DNA mismatch repair protein MutS domain-containing protein 1904572 11054572 Murru_1744 Muricauda ruestringensis DSM 13258 DNA mismatch repair protein MutS domain-containing protein YP_004788206.1 1902803 D 886377 CDS YP_004788207.1 344203064 11054573 complement(1904569..1905669) 1 NC_015945.1 KEGG: fbc:FB2170_03455 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1905669 11054573 Murru_1745 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788207.1 1904569 R 886377 CDS YP_004788208.1 344203065 11054574 complement(1905773..1907815) 1 NC_015945.1 PFAM: BlaR1 peptidase M56; COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component; InterPro IPR008756; KEGG: fbc:FB2170_03450 TonB; PFAM: Peptidase M56, BlaR1; SPTR: TonB; peptidase M56 BlaR1 1907815 11054574 Murru_1746 Muricauda ruestringensis DSM 13258 peptidase M56 BlaR1 YP_004788208.1 1905773 R 886377 CDS YP_004788209.1 344203066 11054575 complement(1907818..1908183) 1 NC_015945.1 PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: fbc:FB2170_03445 putative antibiotic resistance-related regulatory protein; PFAM: Penicillinase repressor; SPTR: Putative antibiotic resistance-related regulatory protein; CopY family transcriptional repressor 1908183 11054575 Murru_1747 Muricauda ruestringensis DSM 13258 CopY family transcriptional repressor YP_004788209.1 1907818 R 886377 CDS YP_004788210.1 344203067 11054576 1908290..1908898 1 NC_015945.1 PFAM: PhnA protein; TIGRFAM: alkylphosphonate utilization operon protein PhnA; COGs: COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism; InterPro IPR013987:IPR013988:IPR013991; KEGG: fbc:FB2170_03440 phosphonate metabolism Zn-ribbon-containing protein; PFAM: PhnA protein, C-terminal; PhnA protein, N-terminal; SMART: PhnA protein N-terminal, proteobacterial; SPTR: Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism; PhnA protein 1908898 11054576 Murru_1748 Muricauda ruestringensis DSM 13258 PhnA protein YP_004788210.1 1908290 D 886377 CDS YP_004788211.1 344203068 11054577 complement(1908895..1910283) 1 NC_015945.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650; KEGG: fbc:FB2170_03435 putative succinyl-diaminopimelate desuccinylase; PFAM: Peptidase M20; Peptidase M20, dimerisation; PRIAM: Beta-Ala-His dipeptidase; SPTR: Putative succinyl-diaminopimelate desuccinylase; beta-Ala-His dipeptidase 1910283 11054577 Murru_1749 Muricauda ruestringensis DSM 13258 beta-Ala-His dipeptidase YP_004788211.1 1908895 R 886377 CDS YP_004788212.1 344203069 11054579 complement(1910780..1911934) 1 NC_015945.1 KEGG: ppn:Palpr_1952 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1911934 11054579 Murru_1750 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788212.1 1910780 R 886377 CDS YP_004788213.1 344203070 11054580 1912061..1913062 1 NC_015945.1 KEGG: fjo:Fjoh_4751 transcriptional regulator-like protein; SPTR: Putative uncharacterized protein; hypothetical protein 1913062 11054580 Murru_1751 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788213.1 1912061 D 886377 CDS YP_004788214.1 344203071 11054581 1913119..1915620 1 NC_015945.1 PFAM: N-6 DNA Methylase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Type I restriction modification DNA specificity domain; COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356:IPR003594; KEGG: rbi:RB2501_07120 type I restriction-modification system, M subunit; PFAM: DNA methylase, adenine-specific; ATPase-like, ATP-binding domain; SPTR: Putative DNA restriction-modification system, DNA methylase; N-6 DNA methylase 1915620 11054581 Murru_1752 Muricauda ruestringensis DSM 13258 N-6 DNA methylase YP_004788214.1 1913119 D 886377 CDS YP_004788215.1 344203072 11054582 1915623..1916801 1 NC_015945.1 KEGG: rbi:RB2501_07115 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1916801 11054582 Murru_1753 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788215.1 1915623 D 886377 CDS YP_004788216.1 344203073 11054583 1916866..1918146 1 NC_015945.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2130); COGs: COG4487 conserved hypothetical protein; InterPro IPR019219; KEGG: llo:LLO_2961 coiled-coil protein; PFAM: Protein of unknown function DUF2130; SPTR: Putative uncharacterized protein; hypothetical protein 1918146 11054583 Murru_1754 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788216.1 1916866 D 886377 CDS YP_004788217.1 344203074 11054584 1918150..1919787 1 NC_015945.1 PFAM: N-6 DNA Methylase; HsdM N-terminal domain; COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356; KEGG: gur:Gura_2095 N-6 DNA methylase; PFAM: DNA methylase, adenine-specific; SPTR: Type I restriction modification system M subunit (Site-specific DNA-methyltransferase subunit); N-6 DNA methylase 1919787 11054584 Murru_1755 Muricauda ruestringensis DSM 13258 N-6 DNA methylase YP_004788217.1 1918150 D 886377 CDS YP_004788218.1 344203075 11054585 1919789..1920949 1 NC_015945.1 PFAM: Type I restriction modification DNA specificity domain; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: spx:SPG_0813 type I restriction-modification system subunit S; PFAM: Restriction endonuclease, type I, S subunit, EcoBI; SPTR: Restriction modification system DNA specificity domain; restriction modification system DNA specificity domain-containing protein 1920949 11054585 Murru_1756 Muricauda ruestringensis DSM 13258 restriction modification system DNA specificity domain-containing protein YP_004788218.1 1919789 D 886377 CDS YP_004788219.1 344203076 11054586 1921087..1922319 1 NC_015945.1 PFAM: 'Cold-shock' DNA-binding domain; InterPro IPR002059:IPR011129; KEGG: cyp:PCC8801_1879 hypothetical protein; PFAM: Cold-shock protein, DNA-binding; SPTR: Putative uncharacterized protein; DNA-binding cold-shock protein 1922319 11054586 Murru_1757 Muricauda ruestringensis DSM 13258 DNA-binding cold-shock protein YP_004788219.1 1921087 D 886377 CDS YP_004788220.1 344203077 11054587 1922335..1922892 1 NC_015945.1 PFAM: Protein of unknown function (DUF1643); InterPro IPR012441; KEGG: mtt:Ftrac_0456 hypothetical protein; PFAM: Protein of unknown function DUF1643; SPTR: Putative uncharacterized protein; hypothetical protein 1922892 11054587 Murru_1758 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788220.1 1922335 D 886377 CDS YP_004788221.1 344203078 11054588 1922906..1926391 1 NC_015945.1 PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Helicase conserved C-terminal domain; Domain of unknown function (DUF3559); Type III restriction enzyme, res subunit; COGs: COG4096 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterPro IPR007409:IPR006935:IPR001650:IPR014001; KEGG: mtt:Ftrac_1394 type I site-specific deoxyribonuclease; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Helicase, C-terminal; PRIAM: Type I site-specific deoxyribonuclease; SMART: DEAD-like helicase, N-terminal; SPTR: Type I restriction enzyme, R protein; Type I site-specific deoxyribonuclease 1926391 11054588 Murru_1759 Muricauda ruestringensis DSM 13258 Type I site-specific deoxyribonuclease YP_004788221.1 1922906 D 886377 CDS YP_004788222.1 344203079 11054589 1926466..1928223 1 NC_015945.1 KEGG: she:Shewmr4_1714 hypothetical protein; hypothetical protein 1928223 11054589 Murru_1760 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788222.1 1926466 D 886377 CDS YP_004788223.1 344203080 11054590 complement(1928799..1929146) 1 NC_015945.1 hypothetical protein 1929146 11054590 Murru_1761 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788223.1 1928799 R 886377 CDS YP_004788224.1 344203081 11054591 complement(1929177..1929524) 1 NC_015945.1 KEGG: zpr:ZPR_2787 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1929524 11054591 Murru_1762 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788224.1 1929177 R 886377 CDS YP_004788225.1 344203082 11054592 complement(1929535..1930740) 1 NC_015945.1 PFAM: HEPN domain; KEGG: zpr:ZPR_1524 nucleotidyltransferase substrate binding subunit; SPTR: Nucleotidyltransferase substrate binding subunit; hypothetical protein 1930740 11054592 Murru_1763 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788225.1 1929535 R 886377 CDS YP_004788226.1 344203083 11054593 1930885..1931286 1 NC_015945.1 PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: gfo:GFO_0674 HTH_3 family transcriptional regulator protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: HTH_3 family transcriptional regulator protein; helix-turn-helix domain-containing protein 1931286 11054593 Murru_1764 Muricauda ruestringensis DSM 13258 helix-turn-helix domain-containing protein YP_004788226.1 1930885 D 886377 CDS YP_004788227.1 344203084 11054594 1931395..1931577 1 NC_015945.1 hypothetical protein 1931577 11054594 Murru_1765 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788227.1 1931395 D 886377 CDS YP_004788228.1 344203085 11054595 1931574..1932050 1 NC_015945.1 PFAM: Domain of unknown function (DUF1814); KEGG: dol:Dole_1128 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1932050 11054595 Murru_1766 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788228.1 1931574 D 886377 CDS YP_004788229.1 344203086 11054596 1932521..1933474 1 NC_015945.1 KEGG: vco:VC0395_0845 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1933474 11054596 Murru_1767 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788229.1 1932521 D 886377 CDS YP_004788230.1 344203087 11054597 complement(1933705..1934919) 1 NC_015945.1 PFAM: Phage integrase family; InterPro IPR002104; KEGG: zpr:ZPR_3365 tyrosine type site-specific recombinase; PFAM: Integrase, catalytic core, phage; SPTR: Tyrosine type site-specific recombinase; integrase family protein 1934919 11054597 Murru_1768 Muricauda ruestringensis DSM 13258 integrase family protein YP_004788230.1 1933705 R 886377 CDS YP_004788231.1 344203088 11054598 complement(1935214..1935420) 1 NC_015945.1 hypothetical protein 1935420 11054598 Murru_1769 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788231.1 1935214 R 886377 CDS YP_004788232.1 344203089 11054599 1935984..1936373 1 NC_015945.1 PFAM: Response regulator receiver domain; InterPro IPR001789; KEGG: rbi:RB2501_13034 hypothetical protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Putative uncharacterized protein; response regulator receiver 1936373 11054599 Murru_1770 Muricauda ruestringensis DSM 13258 response regulator receiver YP_004788232.1 1935984 D 886377 CDS YP_004788233.1 344203090 11054600 1936459..1937916 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR013655:IPR003594:IPR001610:IPR000014; KEGG: rbi:RB2501_07205 histidine kinase sensor protein; PFAM: ATPase-like, ATP-binding domain; PAS fold-3; SMART: ATPase-like, ATP-binding domain; PAC motif; SPTR: Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS; PAS/PAC sensor signal transduction histidine kinase 1937916 11054600 Murru_1771 Muricauda ruestringensis DSM 13258 PAS/PAC sensor signal transduction histidine kinase YP_004788233.1 1936459 D 886377 CDS YP_004788234.1 344203091 11054601 complement(1937921..1938856) 1 NC_015945.1 PFAM: Pyridoxal-phosphate dependent enzyme; COGs: COG1171 Threonine dehydratase; InterPro IPR001926; KEGG: zpr:ZPR_3642 serine racemase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Serine racemase; SPTR: Serine racemase; serine racemase 1938856 11054601 Murru_1772 Muricauda ruestringensis DSM 13258 serine racemase YP_004788234.1 1937921 R 886377 CDS YP_004788235.1 344203092 11054602 complement(1938917..1939825) 1 NC_015945.1 PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: fbc:FB2170_03675 putative universal stress protein UspA; PFAM: UspA; SPTR: Putative universal stress protein UspA; UspA domain-containing protein 1939825 11054602 Murru_1773 Muricauda ruestringensis DSM 13258 UspA domain-containing protein YP_004788235.1 1938917 R 886377 CDS YP_004788236.1 344203093 11054603 complement(1939907..1940596) 1 NC_015945.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595:IPR001808; KEGG: fbc:FB2170_03680 transcriptional regulator; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SPTR: Transcriptional regulatory protein; Crp/Fnr family transcriptional regulator 1940596 11054603 Murru_1774 Muricauda ruestringensis DSM 13258 Crp/Fnr family transcriptional regulator YP_004788236.1 1939907 R 886377 CDS YP_004788237.1 344203094 11054604 1940716..1943100 1 NC_015945.1 PFAM: E1-E2 ATPase; Putative metal-binding domain of cation transport ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2217 Cation transport ATPase; InterPro IPR008250:IPR005834:IPR006416:IPR001757; KEGG: fbc:FB2170_03685 cation transport ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; PRIAM: Copper-exporting ATPase; SPTR: Cation transport ATPase, E1-E2 family protein; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; heavy metal translocating P-type ATPase 1943100 11054604 Murru_1775 Muricauda ruestringensis DSM 13258 heavy metal translocating P-type ATPase YP_004788237.1 1940716 D 886377 CDS YP_004788238.1 344203095 11054605 1943160..1943369 1 NC_015945.1 PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; InterPro IPR004714; KEGG: gfo:GFO_1432 cbb3-type cytochrome oxidase maturation protein; PFAM: Cytochrome oxidase maturation protein cbb3-type; SPTR: Cbb3-type cytochrome oxidase maturation protein; TIGRFAM: Cytochrome oxidase maturation protein cbb3-type; cbb3-type cytochrome oxidase maturation protein 1943369 11054605 Murru_1776 Muricauda ruestringensis DSM 13258 cbb3-type cytochrome oxidase maturation protein YP_004788238.1 1943160 D 886377 CDS YP_004788239.1 344203096 11054606 1943372..1945555 1 NC_015945.1 PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883:IPR003468:IPR004677; KEGG: rbi:RB2501_04155 putative bifunctional cbb3-type cytochrome c oxidase subunit I/II; PFAM: Cytochrome c oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Probable cytochrome oxidase subunit (Cbb3-type); TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome c oxidase, monohaem subunit/FixO; cytochrome c oxidase, cbb3-type subunit I 1945555 11054606 Murru_1777 Muricauda ruestringensis DSM 13258 cytochrome c oxidase, cbb3-type subunit I YP_004788239.1 1943372 D 886377 CDS YP_004788240.1 344203097 11054607 1945639..1945827 1 NC_015945.1 PFAM: Cbb3-type cytochrome oxidase component FixQ; KEGG: rbi:RB2501_04160 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1945827 11054607 Murru_1778 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788240.1 1945639 D 886377 CDS YP_004788241.1 344203098 11054608 1945832..1946725 1 NC_015945.1 PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; COGs: COG2010 Cytochrome c mono- and diheme variants; InterPro IPR003088; KEGG: fbc:FB2170_03705 cytochrome-c oxidase FixP chain; PFAM: Cytochrome c, class I; SPTR: Cytochrome-c oxidase fixP chain; cytochrome c class I 1946725 11054608 Murru_1779 Muricauda ruestringensis DSM 13258 cytochrome c class I YP_004788241.1 1945832 D 886377 CDS YP_004788242.1 344203099 11054609 1946855..1948264 1 NC_015945.1 PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG; COGs: COG0348 Polyferredoxin; InterPro IPR014116; KEGG: fbc:FB2170_03710 putative iron-sulfur protein; SPTR: Probable iron-sulfur protein; TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG; cytochrome c oxidase accessory protein CcoG 1948264 11054609 Murru_1780 Muricauda ruestringensis DSM 13258 cytochrome c oxidase accessory protein CcoG YP_004788242.1 1946855 D 886377 CDS YP_004788243.1 344203100 11054610 1948276..1948722 1 NC_015945.1 PFAM: FixH; KEGG: fbc:FB2170_03715 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1948722 11054610 Murru_1781 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788243.1 1948276 D 886377 CDS YP_004788244.1 344203101 11054611 1948725..1949435 1 NC_015945.1 COGs: COG2836 conserved hypothetical protein; KEGG: fbc:FB2170_03720 integral membrane protein; SPTR: Integral membrane protein; integral membrane protein 1949435 11054611 Murru_1782 Muricauda ruestringensis DSM 13258 integral membrane protein YP_004788244.1 1948725 D 886377 CDS YP_004788245.1 344203102 11054612 1949450..1950718 1 NC_015945.1 PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR003702; KEGG: mtt:Ftrac_2521 acetyl-CoA hydrolase/transferase; PFAM: Acetyl-CoA hydrolase/transferase; SPTR: 4-Hydroxybutyrate CoA-transferase; acetyl-CoA hydrolase/transferase 1950718 11054612 Murru_1783 Muricauda ruestringensis DSM 13258 acetyl-CoA hydrolase/transferase YP_004788245.1 1949450 D 886377 CDS YP_004788246.1 344203103 11054613 complement(1950813..1951637) 1 NC_015945.1 PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: fbc:FB2170_03830 universal stress protein; PFAM: UspA; SPTR: Universal stress protein; UspA domain-containing protein 1951637 11054613 Murru_1784 Muricauda ruestringensis DSM 13258 UspA domain-containing protein YP_004788246.1 1950813 R 886377 CDS YP_004788247.1 344203104 11054614 complement(1951655..1953028) 1 NC_015945.1 PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR007197:IPR010723:IPR006638:IPR004558; KEGG: fbc:FB2170_03835 coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; PRIAM: Coproporphyrinogen dehydrogenase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Coproporphyrinogen III oxidase; TIGRFAM: Oxygen-independent coproporphyrinogen III oxidase HemN; oxygen-independent coproporphyrinogen III oxidase 1953028 11054614 Murru_1785 Muricauda ruestringensis DSM 13258 oxygen-independent coproporphyrinogen III oxidase YP_004788247.1 1951655 R 886377 CDS YP_004788248.1 344203105 11054615 1953199..1955043 1 NC_015945.1 PFAM: CBS domain; COGs: COG2524 transcriptional regulator protein; InterPro IPR000644; KEGG: rbi:RB2501_06960 CBS domain pair protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain pair protein; putative signal transduction protein 1955043 11054615 Murru_1786 Muricauda ruestringensis DSM 13258 putative signal transduction protein YP_004788248.1 1953199 D 886377 CDS YP_004788249.1 344203106 11054616 1955046..1956248 1 NC_015945.1 PFAM: Succinylglutamate desuccinylase / Aspartoacylase family; TIGRFAM: succinylglutamate desuccinylase; InterPro IPR007036; KEGG: fbc:FB2170_06110 hypothetical protein; PFAM: Succinylglutamate desuccinylase/aspartoacylase; SPTR: Putative uncharacterized protein; succinylglutamate desuccinylase 1956248 11054616 Murru_1787 Muricauda ruestringensis DSM 13258 succinylglutamate desuccinylase YP_004788249.1 1955046 D 886377 CDS YP_004788250.1 344203107 11054617 complement(1956301..1957029) 1 NC_015945.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR006260; KEGG: fbc:FB2170_08094 TonB; PFAM: TonB, C-terminal; SPTR: TonB; TIGRFAM: TonB, C-terminal; TonB family protein 1957029 11054617 Murru_1788 Muricauda ruestringensis DSM 13258 TonB family protein YP_004788250.1 1956301 R 886377 CDS YP_004788251.1 344203108 11054618 complement(1957248..1958216) 1 NC_015945.1 PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase); COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: fbc:FB2170_07529 putative ROK family transcriptional repressor; PFAM: ROK; PRIAM: Glucokinase; SPTR: Putative ROK family transcriptional repressor; glucokinase 1958216 11054618 Murru_1789 Muricauda ruestringensis DSM 13258 glucokinase YP_004788251.1 1957248 R 886377 CDS YP_004788252.1 344203109 11054619 1958413..1959204 1 NC_015945.1 PFAM: Universal stress protein family; InterPro IPR006016; KEGG: rbi:RB2501_02930 hypothetical protein; PFAM: UspA; SPTR: Putative uncharacterized protein; UspA domain-containing protein 1959204 11054619 Murru_1790 Muricauda ruestringensis DSM 13258 UspA domain-containing protein YP_004788252.1 1958413 D 886377 CDS YP_004788253.1 344203110 11054620 1959284..1960603 1 NC_015945.1 PFAM: Phosphofructokinase; COGs: COG0205 6-phosphofructokinase; InterPro IPR000023; KEGG: rbi:RB2501_13019 diphosphate--fructose-6-phosphate 1-phosphotransferase; PFAM: Phosphofructokinase domain; PRIAM: 6-phosphofructokinase; SPTR: Diphosphate--fructose-6-phosphate 1-phosphotransferase; 6-phosphofructokinase 1960603 11054620 Murru_1791 Muricauda ruestringensis DSM 13258 6-phosphofructokinase YP_004788253.1 1959284 D 886377 CDS YP_004788254.1 344203111 11054621 1960683..1960982 1 NC_015945.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; KEGG: fbc:FB2170_14558 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1960982 11054621 Murru_1792 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788254.1 1960683 D 886377 CDS YP_004788255.1 344203112 11054622 1961031..1961657 1 NC_015945.1 KEGG: fbc:FB2170_14428 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1961657 11054622 Murru_1793 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788255.1 1961031 D 886377 CDS YP_004788256.1 344203113 11054623 complement(1961654..1961803) 1 NC_015945.1 hypothetical protein 1961803 11054623 Murru_1794 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788256.1 1961654 R 886377 CDS YP_004788257.1 344203114 11054624 complement(1961909..1963300) 1 NC_015945.1 PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family; InterPro IPR005828:IPR003663; KEGG: fbc:FB2170_03315 xylose transporter; PFAM: General substrate transporter; SPTR: Xylose transporter; TIGRFAM: Sugar/inositol transporter; sugar transporter 1963300 11054624 Murru_1795 Muricauda ruestringensis DSM 13258 sugar transporter YP_004788257.1 1961909 R 886377 CDS YP_004788258.1 344203115 11054625 complement(1963335..1964576) 1 NC_015945.1 PFAM: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); COGs: COG1519 3-deoxy-D-manno-octulosonic-acid transferase; InterPro IPR007507; KEGG: fbc:FB2170_03305 3-deoxy-D-manno-octulosonic-acid transferase; PFAM: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; SPTR: 3-deoxy-D-manno-octulosonic-acid transferase; three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 1964576 11054625 Murru_1796 Muricauda ruestringensis DSM 13258 three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein YP_004788258.1 1963335 R 886377 CDS YP_004788259.1 344203116 11054626 1964675..1965814 1 NC_015945.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: fbc:FB2170_03300 pigmentation and extracellular proteinase regulator; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Pigmentation and extracellular proteinase regulator; DegT/DnrJ/EryC1/StrS aminotransferase 1965814 11054626 Murru_1797 Muricauda ruestringensis DSM 13258 DegT/DnrJ/EryC1/StrS aminotransferase YP_004788259.1 1964675 D 886377 CDS YP_004788260.1 344203117 11054627 1965818..1966834 1 NC_015945.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase; COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR001509:IPR005886; KEGG: fbc:FB2170_03295 putative UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: UDP-glucose 4-epimerase; SPTR: Putative UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 1966834 11054627 Murru_1798 Muricauda ruestringensis DSM 13258 UDP-glucose 4-epimerase YP_004788260.1 1965818 D 886377 CDS YP_004788261.1 344203118 11054628 1966877..1967233 1 NC_015945.1 KEGG: fbc:FB2170_03285 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1967233 11054628 Murru_1799 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788261.1 1966877 D 886377 CDS YP_004788262.1 344203119 11054629 complement(1967241..1968368) 1 NC_015945.1 PFAM: Protein of unknown function (DUF1624); COGs: COG4299 conserved hypothetical protein; KEGG: cpi:Cpin_1463 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1968368 11054629 Murru_1800 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788262.1 1967241 R 886377 CDS YP_004788263.1 344203120 11054630 1968551..1971349 1 NC_015945.1 PFAM: Dehydrogenase E1 component; Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; COGs: COG0567 2-oxoglutarate dehydrogenase complex dehydrogenase (E1); InterPro IPR001017:IPR005475:IPR011603; KEGG: fbc:FB2170_03275 2-oxoglutarate dehydrogenase, E1 component; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; PRIAM: Oxoglutarate dehydrogenase (succinyl-transferring); SMART: Transketolase-like, pyrimidine-binding domain; SPTR: 2-oxoglutarate dehydrogenase, E1 component; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; 2-oxoglutarate dehydrogenase, E1 subunit 1971349 11054630 Murru_1801 Muricauda ruestringensis DSM 13258 2-oxoglutarate dehydrogenase, E1 subunit YP_004788263.1 1968551 D 886377 CDS YP_004788264.1 344203121 11054631 1971373..1972593 1 NC_015945.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component); COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089:IPR004167:IPR001078:IPR006255; KEGG: rbi:RB2501_03900 dihydrolipoamide succinyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; PRIAM: Dihydrolipoyllysine-residue succinyltransferase; SPTR: 2-oxoglutarate dehydrogenase complex,dihydrolipoamidesuccinyltransferase; TIGRFAM: Dihydrolipoamide succinyltransferase; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 1972593 11054631 Murru_1802 Muricauda ruestringensis DSM 13258 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase YP_004788264.1 1971373 D 886377 CDS YP_004788265.1 344203122 11054632 complement(1972667..1973107) 1 NC_015945.1 PFAM: Retroviral aspartyl protease; KEGG: fbc:FB2170_03265 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1973107 11054632 Murru_1803 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788265.1 1972667 R 886377 CDS YP_004788266.1 344203123 11054633 1973233..1974000 1 NC_015945.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; COGs: COG0084 Mg-dependent DNase; InterPro IPR001130:IPR015991; KEGG: fbc:FB2170_03260 putative Mg-dependent DNase; PFAM: Deoxyribonuclease, TatD-related; SPTR: Putative Mg-dependent DNase; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; TatD family hydrolase 1974000 11054633 Murru_1804 Muricauda ruestringensis DSM 13258 TatD family hydrolase YP_004788266.1 1973233 D 886377 CDS YP_004788267.1 344203124 11054634 1974004..1975035 1 NC_015945.1 PFAM: Asparaginase; TIGRFAM: L-asparaginases, type I; COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D; InterPro IPR006034:IPR006033; KEGG: fbc:FB2170_03255 L-asparaginase I; PFAM: Asparaginase/glutaminase; PRIAM: 1-alkyl-2-acetylglycerophosphocholine esterase; SMART: Asparaginase/glutaminase; SPTR: L-asparaginase I; TIGRFAM: L-asparaginase, type I; type I L-asparaginase 1975035 11054634 Murru_1805 Muricauda ruestringensis DSM 13258 type I L-asparaginase YP_004788267.1 1974004 D 886377 CDS YP_004788268.1 344203125 11054636 1975268..1975996 1 NC_015945.1 PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: fbc:FB2170_03250 putative biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Putative biopolymer transport protein; MotA/TolQ/ExbB proton channel 1975996 11054636 Murru_1806 Muricauda ruestringensis DSM 13258 MotA/TolQ/ExbB proton channel YP_004788268.1 1975268 D 886377 CDS YP_004788269.1 344203126 11054637 1976023..1976460 1 NC_015945.1 KEGG: fbc:FB2170_03245 hypothetical protein; SPTR: Membrane protein; hypothetical protein 1976460 11054637 Murru_1807 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788269.1 1976023 D 886377 CDS YP_004788270.1 344203127 11054638 1976474..1977079 1 NC_015945.1 PFAM: Biopolymer transport protein ExbD/TolR; InterPro IPR003400; KEGG: fbc:FB2170_03240 hypothetical protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative uncharacterized protein; biopolymer transport protein ExbD/TolR 1977079 11054638 Murru_1808 Muricauda ruestringensis DSM 13258 biopolymer transport protein ExbD/TolR YP_004788270.1 1976474 D 886377 CDS YP_004788271.1 344203128 11054639 1977092..1977574 1 NC_015945.1 PFAM: Biopolymer transport protein ExbD/TolR; InterPro IPR003400; KEGG: rbi:RB2501_03865 hypothetical protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative uncharacterized protein; biopolymer transport protein ExbD/TolR 1977574 11054639 Murru_1809 Muricauda ruestringensis DSM 13258 biopolymer transport protein ExbD/TolR YP_004788271.1 1977092 D 886377 CDS YP_004788272.1 344203129 11054640 1977647..1978348 1 NC_015945.1 KEGG: fbc:FB2170_03230 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1978348 11054640 Murru_1810 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788272.1 1977647 D 886377 CDS YP_004788273.1 344203130 11054641 complement(1978343..1978945) 1 NC_015945.1 KEGG: fbc:FB2170_03225 putative transmembrane protein; SPTR: Putative transmembrane protein; hypothetical protein 1978945 11054641 Murru_1811 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788273.1 1978343 R 886377 CDS YP_004788274.1 344203131 11054642 complement(1978945..1980402) 1 NC_015945.1 PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor; COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR007046:IPR007634:IPR000394; KEGG: rbi:RB2501_03850 RNA polymerase sigma-54; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; SPTR: RNA polymerase sigma-54; TIGRFAM: RNA polymerase sigma factor 54; RNA polymerase sigma-54 subunit RpoN 1980402 11054642 Murru_1812 Muricauda ruestringensis DSM 13258 RNA polymerase sigma-54 subunit RpoN YP_004788274.1 1978945 R 886377 CDS YP_004788275.1 344203132 11054643 complement(1980452..1981885) 1 NC_015945.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase; COGs: COG0017 Aspartyl/asparaginyl-tRNA synthetase; HAMAP: Asparaginyl-tRNA synthetase, class IIb; InterPro IPR004365:IPR004364:IPR004522; KEGG: fbc:FB2170_03215 asparaginyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; PRIAM: Asparagine--tRNA ligase; SPTR: Asparaginyl-tRNA synthetase; TIGRFAM: Asparaginyl-tRNA synthetase, class IIb; asparaginyl-tRNA synthetase 1981885 11054643 Murru_1813 Muricauda ruestringensis DSM 13258 asparaginyl-tRNA synthetase YP_004788275.1 1980452 R 886377 CDS YP_004788276.1 344203133 11054644 complement(1981976..1984375) 1 NC_015945.1 PFAM: MMPL family; COGs: COG1033 exporter of the RND superfamily protein; KEGG: rbi:RB2501_03840 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1984375 11054644 Murru_1814 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788276.1 1981976 R 886377 CDS YP_004788277.1 344203134 11054645 complement(1984451..1985005) 1 NC_015945.1 PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor; COGs: COG0233 Ribosome recycling factor; HAMAP: Ribosome recycling factor, bacterial-like; InterPro IPR002661:IPR015998; KEGG: rbi:RB2501_03835 ribosome recycling factor; PFAM: Ribosome recycling factor; SPTR: Ribosome-recycling factor; TIGRFAM: Ribosome recycling factor; ribosome-recycling factor 1985005 11054645 Murru_1815 Muricauda ruestringensis DSM 13258 ribosome-recycling factor YP_004788277.1 1984451 R 886377 CDS YP_004788278.1 344203135 11054646 complement(1985048..1985755) 1 NC_015945.1 PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase; COGs: COG0528 Uridylate kinase; InterPro IPR001048:IPR015963; KEGG: fbc:FB2170_03195 uridylate kinase; PFAM: Aspartate/glutamate/uridylate kinase; PRIAM: UMP kinase; SPTR: Uridylate kinase; TIGRFAM: Uridylate kinase, bacteria; uridylate kinase 1985755 11054646 Murru_1816 Muricauda ruestringensis DSM 13258 uridylate kinase YP_004788278.1 1985048 R 886377 CDS YP_004788279.1 344203136 11054647 complement(1985888..1986712) 1 NC_015945.1 PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts; COGs: COG0264 Translation elongation factor Ts; HAMAP: Translation elongation factor EFTs/EF1B; InterPro IPR000449:IPR014039:IPR001816; KEGG: fbc:FB2170_03190 elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal; SPTR: Elongation factor Ts; TIGRFAM: Translation elongation factor EFTs/EF1B; elongation factor Ts 1986712 11054647 Murru_1817 Muricauda ruestringensis DSM 13258 elongation factor Ts YP_004788279.1 1985888 R 886377 CDS YP_004788280.1 344203137 11054648 complement(1986793..1987893) 1 NC_015945.1 PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; COGs: COG0052 Ribosomal protein S2; InterPro IPR001865:IPR000445:IPR003583:IPR005706; KEGG: fbc:FB2170_03185 30S ribosomal protein S2; PFAM: Ribosomal protein S2; Helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding motif, class 1; SPTR: 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; 30S ribosomal protein S2 1987893 11054648 Murru_1818 Muricauda ruestringensis DSM 13258 30S ribosomal protein S2 YP_004788280.1 1986793 R 886377 CDS YP_004788281.1 344203138 11054649 complement(1988122..1988508) 1 NC_015945.1 PFAM: Ribosomal protein S9/S16; COGs: COG0103 Ribosomal protein S9; InterPro IPR000754; KEGG: zpr:ZPR_0515 30S ribosomal protein S9; PFAM: Ribosomal protein S9; SPTR: 30S ribosomal protein S9; 30S ribosomal protein S9 1988508 11054649 Murru_1819 Muricauda ruestringensis DSM 13258 30S ribosomal protein S9 YP_004788281.1 1988122 R 886377 CDS YP_004788282.1 344203139 11054650 complement(1988508..1988963) 1 NC_015945.1 PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type; COGs: COG0102 Ribosomal protein L13; InterPro IPR005823:IPR005822; KEGG: fbc:FB2170_03175 50S ribosomal protein L13; PFAM: Ribosomal protein L13; SPTR: 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; 50S ribosomal protein L13 1988963 11054650 Murru_1820 Muricauda ruestringensis DSM 13258 50S ribosomal protein L13 YP_004788282.1 1988508 R 886377 CDS YP_004788283.1 344203140 11054651 1989210..1991861 1 NC_015945.1 PFAM: Domain of unknown function (DUF1083); KEGG: fbc:FB2170_03170 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1991861 11054651 Murru_1821 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788283.1 1989210 D 886377 CDS YP_004788284.1 344203141 11054652 complement(1992023..1993123) 1 NC_015945.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; HAMAP: Histidinol-phosphate aminotransferase; InterPro IPR004839:IPR005861; KEGG: amu:Amuc_2138 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: Histidinol-phosphate transaminase; SPTR: Histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 1993123 11054652 Murru_1822 Muricauda ruestringensis DSM 13258 histidinol-phosphate aminotransferase YP_004788284.1 1992023 R 886377 CDS YP_004788285.1 344203142 11054653 complement(1993139..1993435) 1 NC_015945.1 PFAM: Plasmid stabilisation system protein; COGs: COG3668 Plasmid stabilization system protein; InterPro IPR007712; KEGG: dak:DaAHT2_1800 plasmid stabilization system; PFAM: Plasmid stabilisation system; SPTR: Putative uncharacterized protein; plasmid stabilization system 1993435 11054653 Murru_1823 Muricauda ruestringensis DSM 13258 plasmid stabilization system YP_004788285.1 1993139 R 886377 CDS YP_004788286.1 344203143 11054654 complement(1993432..1993656) 1 NC_015945.1 PFAM: Uncharacterised protein family (UPF0156); TIGRFAM: putative addiction module antidote protein, CC2985 family; InterPro IPR005360; KEGG: rbi:RB2501_13544 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Putative addiction module antidote protein, CC2985; addiction module antidote protein 1993656 11054654 Murru_1824 Muricauda ruestringensis DSM 13258 addiction module antidote protein YP_004788286.1 1993432 R 886377 CDS YP_004788287.1 344203144 11054655 complement(1993840..1994709) 1 NC_015945.1 PFAM: Flavin reductase like domain; COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR002563; KEGG: mtt:Ftrac_3079 flavin reductase domain protein fmn-binding protein; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding; SPTR: Putative uncharacterized protein; FMN-binding flavin reductase domain-containing protein 1994709 11054655 Murru_1825 Muricauda ruestringensis DSM 13258 FMN-binding flavin reductase domain-containing protein YP_004788287.1 1993840 R 886377 CDS YP_004788288.1 344203145 11054656 complement(1994860..1996080) 1 NC_015945.1 PFAM: Domain of unknown function (DUF1969); Fumarylacetoacetate (FAA) hydrolase family; TIGRFAM: fumarylacetoacetase; COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR005959:IPR015377:IPR002529; KEGG: ran:Riean_0663 fumarylacetoacetase; PFAM: Fumarylacetoacetase, N-terminal; Fumarylacetoacetase, C-terminal-like; PRIAM: Fumarylacetoacetase; SPTR: Fumarylacetoacetase; TIGRFAM: Fumarylacetoacetase; fumarylacetoacetase 1996080 11054656 Murru_1826 Muricauda ruestringensis DSM 13258 fumarylacetoacetase YP_004788288.1 1994860 R 886377 CDS YP_004788289.1 344203146 11054657 complement(1996239..1997396) 1 NC_015945.1 PFAM: homogentisate 1,2-dioxygenase; TIGRFAM: homogentisate 1,2-dioxygenase; COGs: COG3508 Homogentisate 1 2-dioxygenase; InterPro IPR005708; KEGG: rbi:RB2501_04125 homogentisate 1,2-dioxygenase; PFAM: Homogentisate 1,2-dioxygenase; SPTR: Homogentisate 1,2-dioxygenase; homogentisate 12-dioxygenase 1997396 11054657 Murru_1827 Muricauda ruestringensis DSM 13258 homogentisate 12-dioxygenase YP_004788289.1 1996239 R 886377 CDS YP_004788290.1 344203147 11054658 complement(1997478..1998611) 1 NC_015945.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; COGs: COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins; InterPro IPR005956:IPR004360; KEGG: dfe:Dfer_2107 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; PRIAM: 4-hydroxyphenylpyruvate dioxygenase; SPTR: 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvate dioxygenase 1998611 11054658 Murru_1828 Muricauda ruestringensis DSM 13258 4-hydroxyphenylpyruvate dioxygenase YP_004788290.1 1997478 R 886377 CDS YP_004788291.1 344203148 11054659 1998731..1999246 1 NC_015945.1 PFAM: MarR family; InterPro IPR000835; KEGG: dfe:Dfer_3933 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; regulatory protein MarR 1999246 11054659 Murru_1829 Muricauda ruestringensis DSM 13258 regulatory protein MarR YP_004788291.1 1998731 D 886377 CDS YP_004788292.1 344203149 11054660 complement(1999222..1999971) 1 NC_015945.1 PFAM: Sulfite exporter TauE/SafE; InterPro IPR002781; KEGG: fbc:FB2170_09461 hypothetical protein; PFAM: Protein of unknown function DUF81; SPTR: Putative uncharacterized protein; hypothetical protein 1999971 11054660 Murru_1830 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788292.1 1999222 R 886377 CDS YP_004788293.1 344203150 11054661 2000151..2000714 1 NC_015945.1 hypothetical protein 2000714 11054661 Murru_1831 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788293.1 2000151 D 886377 CDS YP_004788294.1 344203151 11054662 complement(2000785..2004060) 1 NC_015945.1 PFAM: WD40-like Beta Propeller Repeat; Peptidase family S41; COGs: COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system; InterPro IPR011659:IPR005151; KEGG: gau:GAU_2322 tricorn protease; PFAM: Peptidase S41; WD40-like Beta Propeller; SMART: Peptidase S41; SPTR: Peptidase S41; peptidase S41 2004060 11054662 Murru_1832 Muricauda ruestringensis DSM 13258 peptidase S41 YP_004788294.1 2000785 R 886377 CDS YP_004788295.1 344203152 11054663 complement(2004164..2004439) 1 NC_015945.1 PFAM: Thioredoxin; KEGG: sua:Saut_0307 thioredoxin domain-containing protein; SPTR: Thioredoxin-like protein; thioredoxin domain-containing protein 2004439 11054663 Murru_1833 Muricauda ruestringensis DSM 13258 thioredoxin domain-containing protein YP_004788295.1 2004164 R 886377 CDS YP_004788296.1 344203153 11054664 complement(2004460..2005278) 1 NC_015945.1 PFAM: NIPSNAP; InterPro IPR012577; KEGG: fbc:FB2170_01866 hypothetical protein; PFAM: NIPSNAP; SPTR: Putative uncharacterized protein; NIPSNAP family containing protein 2005278 11054664 Murru_1834 Muricauda ruestringensis DSM 13258 NIPSNAP family containing protein YP_004788296.1 2004460 R 886377 CDS YP_004788297.1 344203154 11054665 complement(2005518..2006180) 1 NC_015945.1 KEGG: lic:LIC12005 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2006180 11054665 Murru_1835 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788297.1 2005518 R 886377 CDS YP_004788298.1 344203155 11054666 complement(2006348..2006860) 1 NC_015945.1 KEGG: shl:Shal_2177 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2006860 11054666 Murru_1836 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788298.1 2006348 R 886377 CDS YP_004788299.1 344203156 11054667 complement(2006888..2009722) 1 NC_015945.1 PFAM: 3'-5' exonuclease; 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I; COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterProIPR018320:IPR020046:IPR020047:IPR002562:IPR 001098:IPR002421:IPR008918; KEGG: fbc:FB2170_03150 DNA polymerase I; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, alpha-helical arch, N-terminal; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; SMART: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 3'-5' exonuclease; SPTR: DNA polymerase I; TIGRFAM: DNA polymerase 1; DNA polymerase I 2009722 11054667 Murru_1837 Muricauda ruestringensis DSM 13258 DNA polymerase I YP_004788299.1 2006888 R 886377 CDS YP_004788300.1 344203157 11054668 complement(2009889..2010890) 1 NC_015945.1 PFAM: Asparaginase; COGs: COG1446 Asparaginase; InterPro IPR006311:IPR000246; KEGG: fbc:FB2170_03145 asparaginase; PFAM: Peptidase T2, asparaginase 2; PRIAM:N(4)-(beta-N-acetylglucosaminyl)-L-asparagina se; SPTR: Asparaginase; N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase 2010890 11054668 Murru_1838 Muricauda ruestringensis DSM 13258 N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase YP_004788300.1 2009889 R 886377 CDS YP_004788301.1 344203158 11054669 2010931..2011650 1 NC_015945.1 PFAM: CutC family; COGs: COG3142 Uncharacterized protein involved in copper resistance; InterPro IPR005627; KEGG: fbc:FB2170_03140 copper homeostasis protein; PFAM: CutC; SPTR: Copper homeostasis protein; CutC family protein 2011650 11054669 Murru_1839 Muricauda ruestringensis DSM 13258 CutC family protein YP_004788301.1 2010931 D 886377 CDS YP_004788302.1 344203159 11054670 2011705..2012940 1 NC_015945.1 PFAM: Calcineurin-like phosphoesterase; COGs: COG1408 phosphohydrolase; InterPro IPR004843; KEGG: fbc:FB2170_03135 hypothetical protein; PFAM: Metallo-dependent phosphatase; SPTR: Putative uncharacterized protein; metallophosphoesterase 2012940 11054670 Murru_1840 Muricauda ruestringensis DSM 13258 metallophosphoesterase YP_004788302.1 2011705 D 886377 CDS YP_004788303.1 344203160 11054671 complement(2012985..2013446) 1 NC_015945.1 PFAM: CBS domain; COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR000644; KEGG: fbc:FB2170_09526 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain protein; hypothetical protein 2013446 11054671 Murru_1841 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788303.1 2012985 R 886377 CDS YP_004788304.1 344203161 11054672 2013716..2014015 1 NC_015945.1 PFAM: Thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766; KEGG: fbc:FB2170_03130 putative thioredoxin; PFAM: Thioredoxin domain; SPTR: Putative thioredoxin; thioredoxin domain-containing protein 2014015 11054672 Murru_1842 Muricauda ruestringensis DSM 13258 thioredoxin domain-containing protein YP_004788304.1 2013716 D 886377 CDS YP_004788305.1 344203162 11054673 complement(2014175..2017507) 1 NC_015945.1 PFAM: Protein of unknown function (DUF2723); KEGG: fbc:FB2170_03125 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2017507 11054673 Murru_1843 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788305.1 2014175 R 886377 CDS YP_004788306.1 344203163 11054675 complement(2017809..2018411) 1 NC_015945.1 KEGG: mtt:Ftrac_1734 fe-S-cluster oxidoreductase; SPTR: Fe-S-cluster oxidoreductase; fe-S-cluster oxidoreductase 2018411 11054675 Murru_1844 Muricauda ruestringensis DSM 13258 fe-S-cluster oxidoreductase YP_004788306.1 2017809 R 886377 CDS YP_004788307.1 344203164 11054676 complement(2018629..2022066) 1 NC_015945.1 PFAM: PA14 domain; InterPro IPR003367:IPR001304:IPR011658; KEGG: fjo:Fjoh_1720 C-type lectin domain-containing protein; PFAM: C-type lectin; Thrombospondin, type 3-like repeat; SMART: PA14; SPTR: Putative uncharacterized protein; C-type lectin domain-containing protein 2022066 11054676 Murru_1845 Muricauda ruestringensis DSM 13258 C-type lectin domain-containing protein YP_004788307.1 2018629 R 886377 CDS YP_004788308.1 344203165 11054677 2022386..2022847 1 NC_015945.1 PFAM: Uncharacterised BCR, YhbC family COG0779; HAMAP: Ribosome maturation factor RimP; InterPro IPR003728; KEGG: fbc:FB2170_03110 hypothetical protein; PFAM: Ribosome maturation factor RimP; SPTR: Ribosome maturation factor rimP; ribosome maturation factor rimP 2022847 11054677 Murru_1846 Muricauda ruestringensis DSM 13258 ribosome maturation factor rimP YP_004788308.1 2022386 D 886377 CDS YP_004788309.1 344203166 11054678 2022860..2024092 1 NC_015945.1 PFAM: NusA N-terminal domain; TIGRFAM: transcription termination factor NusA; COGs: COG0195 Transcription elongation factor; InterPro IPR010213:IPR013735; KEGG: fbc:FB2170_03105 transcription elongation factor NusA; PFAM: Transcription factor NusA, N-terminal; SPTR: Transcription elongation factor NusA; TIGRFAM: Transcription termination factor NusA; NusA antitermination factor 2024092 11054678 Murru_1847 Muricauda ruestringensis DSM 13258 NusA antitermination factor YP_004788309.1 2022860 D 886377 CDS YP_004788310.1 344203167 11054679 2024135..2026876 1 NC_015945.1 PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2; COGs: COG0532 Translation initiation factor 2 (IF-2; GTPase); InterProIPR000178:IPR005225:IPR006847:IPR000795:IPR 004161; KEGG: fbc:FB2170_03100 translation initiation factor IF-2; PFAM: Protein synthesis factor, GTP-binding; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2; SPTR: Translation initiation factor IF-2; TIGRFAM: Translation initiation factor aIF-2, bacterial-like; Small GTP-binding protein; translation initiation factor IF-2 2026876 11054679 Murru_1848 Muricauda ruestringensis DSM 13258 translation initiation factor IF-2 YP_004788310.1 2024135 D 886377 CDS YP_004788311.1 344203168 11054680 complement(2026928..2027299) 1 NC_015945.1 PFAM: Sporulation related domain; InterPro IPR007730; KEGG: fbc:FB2170_03095 translation initiation factor IF-2; PFAM: Sporulation-related domain; SPTR: Translation initiation factor IF-2; sporulation domain-containing protein 2027299 11054680 Murru_1849 Muricauda ruestringensis DSM 13258 sporulation domain-containing protein YP_004788311.1 2026928 R 886377 CDS YP_004788312.1 344203169 11054681 2027535..2028902 1 NC_015945.1 PFAM: Class III cytochrome C family; Cytochrome c; InterPro IPR003088; KEGG: fbc:FB2170_03090 cytochrome c3; PFAM: Cytochrome c, class I; SPTR: Cytochrome c3; cytochrome c class I 2028902 11054681 Murru_1850 Muricauda ruestringensis DSM 13258 cytochrome c class I YP_004788312.1 2027535 D 886377 CDS YP_004788313.1 344203170 11054682 2028935..2032054 1 NC_015945.1 COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006311:IPR001450; KEGG: fbc:FB2170_03085 molybdopterin oxidoreductase, iron-sulfur binding subunit; PFAM: 4Fe-4S binding domain; SPTR: Molybdopterin oxidoreductase, iron-sulfur binding subunit; 4Fe-4S ferredoxin 2032054 11054682 Murru_1851 Muricauda ruestringensis DSM 13258 4Fe-4S ferredoxin YP_004788313.1 2028935 D 886377 CDS YP_004788314.1 344203171 11054683 2032088..2033839 1 NC_015945.1 PFAM: Polysulphide reductase, NrfD; COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: fbc:FB2170_03080 molybdopterin oxidoredutase membrane subunit; PFAM: Polysulphide reductase, NrfD; SPTR: Molybdopterin oxidoredutase membrane subunit; polysulfide reductase NrfD 2033839 11054683 Murru_1852 Muricauda ruestringensis DSM 13258 polysulfide reductase NrfD YP_004788314.1 2032088 D 886377 CDS YP_004788315.1 344203172 11054684 2033842..2034369 1 NC_015945.1 PFAM: Protein of unknown function (DUF3341); KEGG: rbi:RB2501_03705 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2034369 11054684 Murru_1853 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788315.1 2033842 D 886377 CDS YP_004788316.1 344203173 11054685 2034374..2034943 1 NC_015945.1 PFAM: Cytochrome c; InterPro IPR003088; KEGG: fbc:FB2170_03070 hypothetical protein; PFAM: Cytochrome c, class I; SPTR: Putative uncharacterized protein; cytochrome c class I 2034943 11054685 Murru_1854 Muricauda ruestringensis DSM 13258 cytochrome c class I YP_004788316.1 2034374 D 886377 CDS YP_004788317.1 344203174 11054686 2034961..2036298 1 NC_015945.1 KEGG: rbi:RB2501_03695 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2036298 11054686 Murru_1855 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788317.1 2034961 D 886377 CDS YP_004788318.1 344203175 11054687 2036332..2037456 1 NC_015945.1 PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane domain; COGs: COG1622 Heme/copper-type cytochrome/quinol oxidase subunit 2; InterPro IPR011759:IPR002429; KEGG: fbc:FB2170_03060 putative alternative cytochrome c oxidase polypeptide II transmembrane protein; PFAM: Cytochrome C oxidase subunit II, transmembrane domain; Cytochrome c oxidase subunit II C-terminal; SPTR: Cytochrome c oxidase subunit 2; cytochrome C oxidase subunit II transmembrane region 2037456 11054687 Murru_1856 Muricauda ruestringensis DSM 13258 cytochrome C oxidase subunit II transmembrane region YP_004788318.1 2036332 D 886377 CDS YP_004788319.1 344203176 11054688 2037494..2039317 1 NC_015945.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I; COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: fbc:FB2170_03055 putative cytochrome c oxidase polypeptide I; PFAM: Cytochrome c oxidase, subunit I; SPTR: Probable cytochrome c oxidase polypeptide i (Cytochrome bb3 subunit 1) oxidoreductase protein; cytochrome c oxidase subunit I 2039317 11054688 Murru_1857 Muricauda ruestringensis DSM 13258 cytochrome c oxidase subunit I YP_004788319.1 2037494 D 886377 CDS YP_004788320.1 344203177 11054689 2039441..2040265 1 NC_015945.1 PFAM: Protein of unknown function (DUF2807); KEGG: fbc:FB2170_03050 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2040265 11054689 Murru_1858 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788320.1 2039441 D 886377 CDS YP_004788321.1 344203178 11054690 complement(2040269..2042521) 1 NC_015945.1 PFAM: Acyl-CoA oxidase; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090:IPR002655; KEGG: rbi:RB2501_03675 acyl-coenzyme A oxidase I; PFAM: Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase, C-terminal; PRIAM: Acyl-CoA oxidase; SPTR: Acyl-coenzyme A oxidase I, putative; acyl-CoA oxidase 2042521 11054690 Murru_1859 Muricauda ruestringensis DSM 13258 acyl-CoA oxidase YP_004788321.1 2040269 R 886377 CDS YP_004788322.1 344203179 11054691 2042648..2043670 1 NC_015945.1 PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit; COGs: COG2255 Holliday junction resolvasome helicase subunit; HAMAP: DNA helicase, Holliday junction RuvB type; InterProIPR004605:IPR008824:IPR003959:IPR008823:IPR 003593; KEGG: fbc:FB2170_03040 Holliday junction DNA helicase RuvB; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal; SMART: ATPase, AAA+ type, core; SPTR: Holliday junction ATP-dependent DNA helicase ruvB; TIGRFAM: DNA helicase, Holliday junction RuvB type; Holliday junction DNA helicase subunit RuvB 2043670 11054691 Murru_1860 Muricauda ruestringensis DSM 13258 Holliday junction DNA helicase subunit RuvB YP_004788322.1 2042648 D 886377 CDS YP_004788323.1 344203180 11054692 2043955..2044947 1 NC_015945.1 PFAM: Cytochrome c; COGs: COG3258 Cytochrome c; KEGG: mtt:Ftrac_3649 cytochrome c family protein; SPTR: Putative uncharacterized protein; cytochrome c family protein 2044947 11054692 Murru_1861 Muricauda ruestringensis DSM 13258 cytochrome c family protein YP_004788323.1 2043955 D 886377 CDS YP_004788324.1 344203181 11054693 2044960..2045634 1 NC_015945.1 InterPro IPR006311; KEGG: cpi:Cpin_2598 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2045634 11054693 Murru_1862 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788324.1 2044960 D 886377 CDS YP_004788325.1 344203182 11054694 2045638..2046048 1 NC_015945.1 PFAM: DsrE/DsrF-like family; COGs: COG1416 conserved hypothetical protein; KEGG: slt:Slit_1694 domain of unknown function DUF1791; SPTR: Putative uncharacterized protein; hypothetical protein 2046048 11054694 Murru_1863 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788325.1 2045638 D 886377 CDS YP_004788326.1 344203183 11054695 2046054..2046479 1 NC_015945.1 PFAM: GIY-YIG catalytic domain; COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: gfo:GFO_0169 excinuclease ABC subunit C; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: Protein containing N-terminal domain of the UvrABC system protein C; excinuclease ABC C subunit domain-containing protein 2046479 11054695 Murru_1864 Muricauda ruestringensis DSM 13258 excinuclease ABC C subunit domain-containing protein YP_004788326.1 2046054 D 886377 CDS YP_004788327.1 344203184 11054696 2046507..2047430 1 NC_015945.1 PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative; COGs: COG1600 Uncharacterized Fe-S protein; InterPro IPR013542:IPR001450; KEGG: gfo:GFO_0176 4Fe-4S binding domain-containing protein; PFAM: Domain of unknown function DUF1730; 4Fe-4S binding domain; SPTR: Iron-sulfur cluster binding protein; hypothetical protein 2047430 11054696 Murru_1865 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788327.1 2046507 D 886377 CDS YP_004788328.1 344203185 11054697 2047597..2049894 1 NC_015945.1 PFAM: Malic enzyme, NAD binding domain; Phosphate acetyl/butaryl transferase; Malic enzyme, N-terminal domain; TIGRFAM: phosphate acetyltransferase; COGs: COG0281 Malic enzyme; InterPro IPR012301:IPR012302:IPR002505; KEGG: fbc:FB2170_03030 putative NADP-dependent malic enzyme; PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; Phosphate acetyl/butaryl transferase; SMART: Malic enzyme, NAD-binding; SPTR: Putative NADP-dependent malic enzyme; NAD-binding malic protein 2049894 11054697 Murru_1866 Muricauda ruestringensis DSM 13258 NAD-binding malic protein YP_004788328.1 2047597 D 886377 CDS YP_004788329.1 344203186 11054698 2049918..2050499 1 NC_015945.1 PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit; COGs: COG0632 Holliday junction resolvasome DNA-binding subunit; HAMAP: Bacterial DNA recombination protein RuvA; InterPro IPR000085:IPR013849:IPR011114:IPR003583; KEGG: fbc:FB2170_03025 Holliday junction DNA helicase motor protein; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal; SPTR: Holliday junction ATP-dependent DNA helicase ruvA; TIGRFAM: Bacterial DNA recombination protein RuvA; Holliday junction DNA helicase subunit RuvA 2050499 11054698 Murru_1867 Muricauda ruestringensis DSM 13258 Holliday junction DNA helicase subunit RuvA YP_004788329.1 2049918 D 886377 CDS YP_004788330.1 344203187 11054699 2050505..2057608 1 NC_015945.1 KEGG: fbc:FB2170_03020 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 2057608 11054699 Murru_1868 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788330.1 2050505 D 886377 CDS YP_004788331.1 344203188 11054700 2057712..2058092 1 NC_015945.1 PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein; COGs: COG0509 Glycine cleavage system H protein (lipoate-binding); HAMAP: Glycine cleavage H-protein; InterPro IPR017453:IPR002930; KEGG: gfo:GFO_0183 glycine cleavage system protein H; PFAM: Glycine cleavage H-protein; SPTR: Glycine cleavage system H protein; TIGRFAM: Glycine cleavage H-protein, subgroup; glycine cleavage system H protein 2058092 11054700 Murru_1869 Muricauda ruestringensis DSM 13258 glycine cleavage system H protein YP_004788331.1 2057712 D 886377 CDS YP_004788332.1 344203189 11054701 2058142..2058492 1 NC_015945.1 PFAM: VanZ like family; InterPro IPR006976; KEGG: rbi:RB2501_03605 hypothetical protein; PFAM: VanZ-like; SPTR: Putative uncharacterized protein; VanZ family protein 2058492 11054701 Murru_1870 Muricauda ruestringensis DSM 13258 VanZ family protein YP_004788332.1 2058142 D 886377 CDS YP_004788333.1 344203190 11054702 2058556..2059260 1 NC_015945.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR006260; KEGG: rbi:RB2501_03600 TonB; PFAM: TonB, C-terminal; SPTR: TonB; TIGRFAM: TonB, C-terminal; TonB family protein 2059260 11054702 Murru_1871 Muricauda ruestringensis DSM 13258 TonB family protein YP_004788333.1 2058556 D 886377 CDS YP_004788334.1 344203191 11054703 2059418..2060320 1 NC_015945.1 PFAM: UbiA prenyltransferase family; TIGRFAM: protoheme IX farnesyltransferase; COGs: COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor); HAMAP: Protohaem IX farnesyltransferase; InterPro IPR006369:IPR000537; KEGG: fbc:FB2170_02995 protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; SPTR: Protoheme IX farnesyltransferase; TIGRFAM: Protohaem IX farnesyltransferase; Protoheme IX farnesyltransferase 2060320 11054703 Murru_1872 Muricauda ruestringensis DSM 13258 Protoheme IX farnesyltransferase YP_004788334.1 2059418 D 886377 CDS YP_004788335.1 344203192 11054704 2060322..2060903 1 NC_015945.1 PFAM: Cytochrome c oxidase subunit III; COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: fbc:FB2170_02990 cytochrome o ubiquinol oxidase subunit III; PFAM: Cytochrome c oxidase, subunit III; SPTR: Cytochrome o ubiquinol oxidase subunit III; cytochrome c oxidase subunit III 2060903 11054704 Murru_1873 Muricauda ruestringensis DSM 13258 cytochrome c oxidase subunit III YP_004788335.1 2060322 D 886377 CDS YP_004788336.1 344203193 11054705 2060996..2061970 1 NC_015945.1 PFAM: Cytochrome c oxidase subunit III; COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: fbc:FB2170_02985 cytochrome c oxidase subunit III; PFAM: Cytochrome c oxidase, subunit III; SPTR: Cytochrome c oxidase subunit III; cytochrome c oxidase subunit III 2061970 11054705 Murru_1874 Muricauda ruestringensis DSM 13258 cytochrome c oxidase subunit III YP_004788336.1 2060996 D 886377 CDS YP_004788337.1 344203194 11054706 2061986..2062369 1 NC_015945.1 KEGG: rbi:RB2501_03580 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2062369 11054706 Murru_1875 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788337.1 2061986 D 886377 CDS YP_004788338.1 344203195 11054707 2062440..2063072 1 NC_015945.1 KEGG: fbc:FB2170_02975 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2063072 11054707 Murru_1876 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788338.1 2062440 D 886377 CDS YP_004788339.1 344203196 11054708 2063053..2063796 1 NC_015945.1 PFAM: SCO1/SenC; COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: fbc:FB2170_02970 YpmQ; PFAM: Copper chaperone SCO1/SenC; SPTR: YpmQ; electron transport protein SCO1/SenC 2063796 11054708 Murru_1877 Muricauda ruestringensis DSM 13258 electron transport protein SCO1/SenC YP_004788339.1 2063053 D 886377 CDS YP_004788340.1 344203197 11054709 2063793..2064329 1 NC_015945.1 PFAM: Protein of unknown function (DUF420); COGs: COG2322 membrane protein; InterPro IPR007352; KEGG: fbc:FB2170_02965 hypothetical protein; PFAM: Protein of unknown function DUF420; SPTR: Putative uncharacterized protein; hypothetical protein 2064329 11054709 Murru_1878 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788340.1 2063793 D 886377 CDS YP_004788341.1 344203198 11054710 2064337..2064549 1 NC_015945.1 KEGG: fbc:FB2170_02960 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2064549 11054710 Murru_1879 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788341.1 2064337 D 886377 CDS YP_004788342.1 344203199 11054712 2064898..2065599 1 NC_015945.1 PFAM: ABC transporter; TIGRFAM: putative bacteriocin export ABC transporter, lactococcin 972 group; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: rbi:RB2501_03535 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; phosphonate-transporting ATPase 2065599 11054712 Murru_1881 Muricauda ruestringensis DSM 13258 phosphonate-transporting ATPase YP_004788342.1 2064898 D 886377 CDS YP_004788343.1 344203200 11054713 2065592..2066821 1 NC_015945.1 PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: rbi:RB2501_03530 putative ABC transporter; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative ABC transporter; hypothetical protein 2066821 11054713 Murru_1882 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788343.1 2065592 D 886377 CDS YP_004788344.1 344203201 11054714 2066824..2068080 1 NC_015945.1 PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: rbi:RB2501_03525 putative ATP-binding component of ABC transporter; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative ATP-binding component of ABC transporter; hypothetical protein 2068080 11054714 Murru_1883 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788344.1 2066824 D 886377 CDS YP_004788345.1 344203202 11054715 2068119..2069237 1 NC_015945.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: rbi:RB2501_03520 membrane fusion efflux protein; PFAM: Secretion protein HlyD; SPTR: Membrane fusion efflux protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 2069237 11054715 Murru_1884 Muricauda ruestringensis DSM 13258 RND family efflux transporter MFP subunit YP_004788345.1 2068119 D 886377 CDS YP_004788346.1 344203203 11054716 2069280..2070629 1 NC_015945.1 PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fbc:FB2170_02920 putative outer membrane transport/efflux protein; PFAM: Outer membrane efflux protein; SPTR: Putative outer membrane transport/efflux protein; outer membrane efflux protein 2070629 11054716 Murru_1885 Muricauda ruestringensis DSM 13258 outer membrane efflux protein YP_004788346.1 2069280 D 886377 CDS YP_004788347.1 344203204 11054717 2070637..2071326 1 NC_015945.1 PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ; COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone; InterPro IPR022496:IPR000905; KEGG: fbc:FB2170_02915 putative glycoprotease family exported protein; PFAM: Peptidase M22, glycoprotease; SPTR: Putative glycoprotease family exported protein; TIGRFAM: Conserved hypothetical protein CHP03725, YeaZ; hypothetical protein 2071326 11054717 Murru_1886 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788347.1 2070637 D 886377 CDS YP_004788348.1 344203205 11054718 complement(2071323..2072150) 1 NC_015945.1 PFAM: Mechanosensitive ion channel; Conserved TM helix; COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: rbi:RB2501_03500 small-conductance mechanosensitive channel; PFAM: Mechanosensitive ion channel MscS; SPTR: Small-conductance mechanosensitive channel; mechanosensitive ion channel protein MscS 2072150 11054718 Murru_1887 Muricauda ruestringensis DSM 13258 mechanosensitive ion channel protein MscS YP_004788348.1 2071323 R 886377 CDS YP_004788349.1 344203206 11054719 complement(2072234..2074333) 1 NC_015945.1 PFAM: Protein of unknown function, DUF255; Glycosyl hydrolase family 76; COGs: COG1331 Highly conserved protein containing a thioredoxin domain; InterPro IPR004879; KEGG: cat:CA2559_01090 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2074333 11054719 Murru_1888 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788349.1 2072234 R 886377 CDS YP_004788350.1 344203207 11054720 complement(2074401..2074601) 1 NC_015945.1 PFAM: Protein of unknown function (DUF1458); InterPro IPR009923; KEGG: fbc:FB2170_02910 hypothetical protein; PFAM: Dodecin flavoprotein; SPTR: Putative uncharacterized protein; hypothetical protein 2074601 11054720 Murru_1889 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788350.1 2074401 R 886377 CDS YP_004788351.1 344203208 11054721 complement(2074674..2075597) 1 NC_015945.1 PFAM: Scaffold protein Nfu/NifU N terminal; NifU-like domain; COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR014824:IPR001075; KEGG: fbc:FB2170_02905 NifU-like protein; PFAM: NIF system FeS cluster assembly, NifU, C-terminal; NIF system FeS cluster assembly, NifU-like scaffold, N-terminal; SMART: NIF system FeS cluster assembly, NifU-like scaffold, N-terminal; SPTR: NifU related protein; nitrogen-fixing NifU domain-containing protein 2075597 11054721 Murru_1890 Muricauda ruestringensis DSM 13258 nitrogen-fixing NifU domain-containing protein YP_004788351.1 2074674 R 886377 CDS YP_004788352.1 344203209 11054722 2075696..2076691 1 NC_015945.1 PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: fbc:FB2170_02900 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein 2076691 11054722 Murru_1891 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788352.1 2075696 D 886377 CDS YP_004788353.1 344203210 11054723 complement(2077007..2078182) 1 NC_015945.1 PFAM: von Willebrand factor type A domain; InterPro IPR002035; KEGG: fbc:FB2170_02895 hypothetical protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: Putative uncharacterized protein; von Willebrand factor type A 2078182 11054723 Murru_1892 Muricauda ruestringensis DSM 13258 von Willebrand factor type A YP_004788353.1 2077007 R 886377 CDS YP_004788354.1 344203211 11054724 2078381..2080597 1 NC_015945.1 PFAM: Histidine kinase; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR001440:IPR010559:IPR019734; KEGG: fbc:FB2170_02885 histidine kinase; PFAM: Signal transduction histidine kinase, internal region; Tetratricopeptide TPR-1; SPTR: Histidine kinase; putative signal transduction histidine kinase 2080597 11054724 Murru_1893 Muricauda ruestringensis DSM 13258 putative signal transduction histidine kinase YP_004788354.1 2078381 D 886377 CDS YP_004788355.1 344203212 11054725 2080594..2081328 1 NC_015945.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: fbc:FB2170_02880 response regulator; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Response regulator; LytTR family two component transcriptional regulator 2081328 11054725 Murru_1894 Muricauda ruestringensis DSM 13258 LytTR family two component transcriptional regulator YP_004788355.1 2080594 D 886377 CDS YP_004788356.1 344203213 11054726 2081417..2081926 1 NC_015945.1 COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451; KEGG: fbc:FB2170_02875 hexapeptide transferase family protein; SPTR: Hexapeptide transferase family protein; hexapeptide transferase family protein 2081926 11054726 Murru_1895 Muricauda ruestringensis DSM 13258 hexapeptide transferase family protein YP_004788356.1 2081417 D 886377 CDS YP_004788357.1 344203214 11054727 2081974..2082858 1 NC_015945.1 PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR004410:IPR014043:IPR020801; KEGG: fbc:FB2170_02870 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; PRIAM: [Acyl-carrier-protein] S-malonyltransferase; SMART: Polyketide synthase, acyl transferase domain; SPTR: Malonyl CoA-acyl carrier protein transacylase; TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 2082858 11054727 Murru_1896 Muricauda ruestringensis DSM 13258 malonyl CoA-acyl carrier protein transacylase YP_004788357.1 2081974 D 886377 CDS YP_004788358.1 344203215 11054728 2083000..2087808 1 NC_015945.1 PFAM: Calx-beta domain; InterPro IPR001434:IPR003644; KEGG: rbi:RB2501_03425 putative aggregation factor core protein MAFp3, isoform C; PFAM: Na-Ca exchanger/integrin-beta4; SMART: Na-Ca exchanger/integrin-beta4; SPTR: Probable aggregation factor core protein MAFp3, isoform C; TIGRFAM: Domain of unknown function DUF11; hypothetical protein 2087808 11054728 Murru_1897 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788358.1 2083000 D 886377 CDS YP_004788359.1 344203216 11054729 2087810..2088799 1 NC_015945.1 PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: rbi:RB2501_03420 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein 2088799 11054729 Murru_1898 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788359.1 2087810 D 886377 CDS YP_004788360.1 344203217 11054730 2088801..2090747 1 NC_015945.1 PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR006665; KEGG: fbc:FB2170_02855 OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: OmpA family protein; OmpA/MotB domain-containing protein 2090747 11054730 Murru_1899 Muricauda ruestringensis DSM 13258 OmpA/MotB domain-containing protein YP_004788360.1 2088801 D 886377 CDS YP_004788361.1 344203218 11054731 complement(2090749..2091993) 1 NC_015945.1 PFAM: Natural resistance-associated macrophage protein; COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; KEGG: rbi:RB2501_03405 NRAMP family protein; SPTR: Transporter, NRAMP family protein; NRAMP family protein 2091993 11054731 Murru_1900 Muricauda ruestringensis DSM 13258 NRAMP family protein YP_004788361.1 2090749 R 886377 CDS YP_004788362.1 344203219 11054732 complement(2092268..2094643) 1 NC_015945.1 PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR011659:IPR002469:IPR001375; KEGG: gfo:GFO_3446 secreted dipeptidyl-peptidase IV family protein; SPTR: Secreted dipeptidyl-peptidase IV family protein; secreted dipeptidyl-peptidase IV family protein 2094643 11054732 Murru_1901 Muricauda ruestringensis DSM 13258 secreted dipeptidyl-peptidase IV family protein YP_004788362.1 2092268 R 886377 CDS YP_004788363.1 344203220 11054733 2094867..2096591 1 NC_015945.1 PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR003953; KEGG: rbi:RB2501_09520 GMC oxidoreductase family protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: GMC oxidoreductase family protein; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 2096591 11054733 Murru_1902 Muricauda ruestringensis DSM 13258 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_004788363.1 2094867 D 886377 CDS YP_004788364.1 344203221 11054734 2096596..2097306 1 NC_015945.1 KEGG: rbi:RB2501_09525 Tat (twin-arginine translocation) pathway signal sequence domain-containing protein; SPTR: Tat (Twin-arginine translocation) pathway signal sequence domain protein; Tat (twin-arginine translocation) pathway signal sequence domain-containing protein 2097306 11054734 Murru_1903 Muricauda ruestringensis DSM 13258 Tat (twin-arginine translocation) pathway signal sequence domain-containing protein YP_004788364.1 2096596 D 886377 CDS YP_004788365.1 344203222 11054736 complement(2098594..2098854) 1 NC_015945.1 PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: ppn:Palpr_2287 excinuclease ABC C subunit domain protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: GIY-YIG domain protein; manually curated; excinuclease ABC C subunit domain-containing protein 2098854 11054736 Murru_1904 Muricauda ruestringensis DSM 13258 excinuclease ABC C subunit domain-containing protein YP_004788365.1 2098594 R 886377 CDS YP_004788366.1 344203223 11054738 complement(2099112..2101733) 1 NC_015945.1 PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS; COGs: COG0249 Mismatch repair ATPase (MutS family); HAMAP: DNA mismatch repair protein MutS, type 1; InterProIPR005748:IPR007695:IPR007860:IPR007696:IPR 007861:IPR000432; KEGG: fbc:FB2170_02830 DNA mismatch repair protein; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS, clamp; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; SPTR: DNA mismatch repair protein mutS; TIGRFAM: DNA mismatch repair protein MutS, type 1; DNA mismatch repair protein mutS 2101733 11054738 Murru_1905 Muricauda ruestringensis DSM 13258 DNA mismatch repair protein mutS YP_004788366.1 2099112 R 886377 CDS YP_004788367.1 344203224 11054739 2102025..2102558 1 NC_015945.1 PFAM: SpoU rRNA Methylase family; COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: fbc:FB2170_02825 putative SpoU rRNA methylase family protein; PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: Putative SpoU rRNA methylase family protein; tRNA/rRNA methyltransferase SpoU 2102558 11054739 Murru_1906 Muricauda ruestringensis DSM 13258 tRNA/rRNA methyltransferase SpoU YP_004788367.1 2102025 D 886377 CDS YP_004788368.1 344203225 11054740 complement(2102680..2103825) 1 NC_015945.1 PFAM: Deoxynucleoside kinase; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; InterPro IPR000550:IPR002624; KEGG: fbc:FB2170_02820 deoxyguanosine kinase/deoxyadenosine kinase subunit; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; Deoxynucleoside kinase; PRIAM:2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase., Deoxyadenosine kinase; SPTR: Deoxyguanosine kinase/deoxyadenosine kinase subunit; TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 2103825 11054740 Murru_1907 Muricauda ruestringensis DSM 13258 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_004788368.1 2102680 R 886377 CDS YP_004788369.1 344203226 11054741 2103895..2105655 1 NC_015945.1 PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 67K type; COGs: COG0616 Periplasmic serine protease (ClpP class); InterPro IPR004634:IPR004635:IPR002142; KEGG: fbc:FB2170_02815 putative protease IV; PFAM: Peptidase S49; SPTR: Putative protease IV; TIGRFAM: Peptidase S49, protease IV; Peptidase S49, SppA; signal peptide peptidase SppA, 67K type 2105655 11054741 Murru_1908 Muricauda ruestringensis DSM 13258 signal peptide peptidase SppA, 67K type YP_004788369.1 2103895 D 886377 CDS YP_004788370.1 344203227 11054742 2105696..2106403 1 NC_015945.1 PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein; COGs: COG1738 conserved hypothetical protein; InterPro IPR003744; KEGG: fbc:FB2170_02810 hypothetical protein; PFAM: Protein of unknown function DUF165; SPTR: Putative uncharacterized protein; TIGRFAM: Protein of unknown function DUF165; hypothetical protein 2106403 11054742 Murru_1909 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788370.1 2105696 D 886377 CDS YP_004788371.1 344203228 11054743 2106440..2109145 1 NC_015945.1 PFAM: AsmA family; InterPro IPR007844; KEGG: fbc:FB2170_02805 putative outer membrane protein; PFAM: AsmA; SPTR: Putative outer membrane protein; AsmA family protein 2109145 11054743 Murru_1910 Muricauda ruestringensis DSM 13258 AsmA family protein YP_004788371.1 2106440 D 886377 CDS YP_004788372.1 344203229 11054744 complement(2109155..2109379) 1 NC_015945.1 hypothetical protein 2109379 11054744 Murru_1911 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788372.1 2109155 R 886377 CDS YP_004788373.1 344203230 11054745 complement(2109459..2110262) 1 NC_015945.1 PFAM: Protein of unknown function (DUF2797); KEGG: fbc:FB2170_02800 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2110262 11054745 Murru_1912 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788373.1 2109459 R 886377 CDS YP_004788374.1 344203231 11054746 2110361..2111875 1 NC_015945.1 PFAM: GH3 auxin-responsive promoter; InterPro IPR004993; KEGG: fbc:FB2170_02795 putative auxin-regulated protein; PFAM: GH3 auxin-responsive promoter; SPTR: Putative auxin-regulated protein; GH3 auxin-responsive promoter 2111875 11054746 Murru_1913 Muricauda ruestringensis DSM 13258 GH3 auxin-responsive promoter YP_004788374.1 2110361 D 886377 CDS YP_004788375.1 344203232 11054747 2112050..2112592 1 NC_015945.1 KEGG: fbc:FB2170_02790 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2112592 11054747 Murru_1914 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788375.1 2112050 D 886377 CDS YP_004788376.1 344203233 11054748 complement(2112594..2113829) 1 NC_015945.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX); COGs: COG1219 ATP-dependent protease Clp ATPase subunit; HAMAP: Clp protease, ATP-binding subunit ClpX; InterProIPR004487:IPR010603:IPR013093:IPR019489:IPR 003593; KEGG: fbc:FB2170_02785 ATP-dependent protease ATP-binding subunit; PFAM: ATPase, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent protease ATP-binding subunit; TIGRFAM: Clp protease, ATP-binding subunit ClpX; sigma 54 interacting domain-containing protein 2113829 11054748 Murru_1915 Muricauda ruestringensis DSM 13258 sigma 54 interacting domain-containing protein YP_004788376.1 2112594 R 886377 CDS YP_004788377.1 344203234 11054749 complement(2113918..2114595) 1 NC_015945.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; COGs: COG0740 Protease subunit of ATP-dependent Clp protease; HAMAP: Peptidase S14, ClpP; InterPro IPR001907; KEGG: fbc:FB2170_02780 ATP-dependent Clp protease proteolytic subunit 2; PFAM: Peptidase S14, ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit 1; ATP-dependent Clp protease proteolytic subunit 2114595 11054749 Murru_1916 Muricauda ruestringensis DSM 13258 ATP-dependent Clp protease proteolytic subunit YP_004788377.1 2113918 R 886377 CDS YP_004788378.1 344203235 11054750 complement(2114686..2116008) 1 NC_015945.1 PFAM: Bacterial trigger factor protein (TF) C-terminus; Bacterial trigger factor protein (TF); TIGRFAM: trigger factor; COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); InterPro IPR005215:IPR008881; KEGG: fbc:FB2170_02770 FKBP-type peptidyl-prolyl cis-transisomerase; PFAM: Trigger factor, ribosome-binding, bacterial; SPTR: FKBP-type peptidyl-prolyl cis-transisomerase (Trigger factor); TIGRFAM: Trigger factor; trigger factor 2116008 11054750 Murru_1917 Muricauda ruestringensis DSM 13258 trigger factor YP_004788378.1 2114686 R 886377 CDS YP_004788379.1 344203236 11054751 complement(2116108..2116452) 1 NC_015945.1 PFAM: Membrane protein of unknown function; InterPro IPR007165; KEGG: fbc:FB2170_02765 hypothetical protein; PFAM: Membrane protein of unknown function; SPTR: Putative uncharacterized protein; hypothetical protein 2116452 11054751 Murru_1918 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788379.1 2116108 R 886377 CDS YP_004788380.1 344203237 11054752 complement(2116525..2118027) 1 NC_015945.1 KEGG: rbi:RB2501_03300 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2118027 11054752 Murru_1919 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788380.1 2116525 R 886377 CDS YP_004788381.1 344203238 11054753 complement(2118164..2118934) 1 NC_015945.1 PFAM: alpha/beta hydrolase fold; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: fbc:FB2170_02755 alpha/beta fold family hydrolase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Hydrolase, alpha/beta fold family, putative; alpha/beta hydrolase fold protein 2118934 11054753 Murru_1920 Muricauda ruestringensis DSM 13258 alpha/beta hydrolase fold protein YP_004788381.1 2118164 R 886377 CDS YP_004788382.1 344203239 11054754 complement(2118934..2119650) 1 NC_015945.1 PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase; COGs: COG0854 Pyridoxal phosphate biosynthesis protein; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; InterPro IPR004569; KEGG: fbc:FB2170_02750 pyridoxal phosphate biosynthetic protein; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; PRIAM: Pyridoxine 5'-phosphate synthase; SPTR: Pyridoxine 5'-phosphate synthase; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; pyridoxine 5'-phosphate synthase 2119650 11054754 Murru_1921 Muricauda ruestringensis DSM 13258 pyridoxine 5'-phosphate synthase YP_004788382.1 2118934 R 886377 CDS YP_004788383.1 344203240 11054755 2119737..2120393 1 NC_015945.1 PFAM: CBS domain; InterPro IPR000644; KEGG: fbc:FB2170_02745 acetoin utilization protein; PFAM: Cystathionine beta-synthase, core; SPTR: Acetoin utilization protein, putative; hypothetical protein 2120393 11054755 Murru_1922 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788383.1 2119737 D 886377 CDS YP_004788384.1 344203241 11054756 2120395..2121276 1 NC_015945.1 PFAM: ATP-NAD kinase; COGs: COG0061 sugar kinase; HAMAP: Inorganic polyphosphate/ATP-NAD kinase, predicted; InterPro IPR002504; KEGG: fbc:FB2170_02740 inorganic polyphosphate/ATP-NAD kinase; PFAM: Inorganic polyphosphate/ATP-NAD kinase, predicted; SPTR: Probable inorganic polyphosphate/ATP-NAD kinase; inorganic polyphosphate/ATP-NAD kinase 2121276 11054756 Murru_1923 Muricauda ruestringensis DSM 13258 inorganic polyphosphate/ATP-NAD kinase YP_004788384.1 2120395 D 886377 CDS YP_004788385.1 344203242 11054757 2121389..2122072 1 NC_015945.1 KEGG: fbc:FB2170_02735 inorganic polyphosphate/ATP-NAD kinase; SPTR: Inorganic polyphosphate/ATP-NAD kinase; inorganic polyphosphate/ATP-NAD kinase 2122072 11054757 Murru_1924 Muricauda ruestringensis DSM 13258 inorganic polyphosphate/ATP-NAD kinase YP_004788385.1 2121389 D 886377 CDS YP_004788386.1 344203243 11054758 2122038..2122814 1 NC_015945.1 PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; COGs: COG0020 Undecaprenyl pyrophosphate synthase; HAMAP:Di-trans-poly-cis-decaprenylcistransferase-li ke; InterPro IPR001441; KEGG: fbc:FB2170_02730 undecaprenyl pyrophosphate synthetase; PFAM:Di-trans-poly-cis-decaprenylcistransferase-lik e; PRIAM: Di-trans,poly-cis-decaprenylcistransferase; SPTR: Undecaprenyl pyrophosphate synthetase; TIGRFAM:Di-trans-poly-cis-decaprenylcistransferase- like; undecaprenyl pyrophosphate synthase 2122814 11054758 Murru_1925 Muricauda ruestringensis DSM 13258 undecaprenyl pyrophosphate synthase YP_004788386.1 2122038 D 886377 CDS YP_004788387.1 344203244 11054759 2122786..2125449 1 NC_015945.1 PFAM: Surface antigen variable number repeat; TIGRFAM: outer membrane protein assembly complex, YaeT protein; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR016474:IPR010827:IPR000184; KEGG: fbc:FB2170_02725 putative outer membrane protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Putative outer membrane protein; TIGRFAM: Outer membrane assembly protein, YaeT; outer membrane protein assembly complex, YaeT protein 2125449 11054759 Murru_1926 Muricauda ruestringensis DSM 13258 outer membrane protein assembly complex, YaeT protein YP_004788387.1 2122786 D 886377 CDS YP_004788388.1 344203245 11054760 2125548..2126369 1 NC_015945.1 PFAM: Outer membrane protein (OmpH-like); InterPro IPR005632; KEGG: fbc:FB2170_02720 cationic outer membrane protein; PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH); SPTR: Cationic outer membrane protein; outer membrane chaperone Skp 2126369 11054760 Murru_1927 Muricauda ruestringensis DSM 13258 outer membrane chaperone Skp YP_004788388.1 2125548 D 886377 CDS YP_004788389.1 344203246 11054761 2126419..2126928 1 NC_015945.1 PFAM: Outer membrane protein (OmpH-like); InterPro IPR005632; KEGG: fbc:FB2170_02715 hypothetical protein; PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH); SPTR: Putative uncharacterized protein; outer membrane chaperone Skp 2126928 11054761 Murru_1928 Muricauda ruestringensis DSM 13258 outer membrane chaperone Skp YP_004788389.1 2126419 D 886377 CDS YP_004788390.1 344203247 11054762 2127013..2127792 1 NC_015945.1 PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase; COGs: COG0796 Glutamate racemase; HAMAP: Glutamate racemase; InterPro IPR004391:IPR015942; KEGG: fbc:FB2170_17296 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; PRIAM: Glutamate racemase; SPTR: Glutamate racemase; TIGRFAM: Glutamate racemase; glutamate racemase 2127792 11054762 Murru_1929 Muricauda ruestringensis DSM 13258 glutamate racemase YP_004788390.1 2127013 D 886377 CDS YP_004788391.1 344203248 11054763 complement(2127796..2128287) 1 NC_015945.1 PFAM: Dihydrofolate reductase; COGs: COG0262 Dihydrofolate reductase; InterPro IPR001796; KEGG: fbc:FB2170_17291 DfrA; PFAM: Dihydrofolate reductase domain; SPTR: Dihydrofolate reductase; dihydrofolate reductase subunit 2128287 11054763 Murru_1930 Muricauda ruestringensis DSM 13258 dihydrofolate reductase subunit YP_004788391.1 2127796 R 886377 CDS YP_004788392.1 344203249 11054764 complement(2128284..2128676) 1 NC_015945.1 KEGG: fbc:FB2170_17286 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2128676 11054764 Murru_1931 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788392.1 2128284 R 886377 CDS YP_004788393.1 344203250 11054765 2128731..2129810 1 NC_015945.1 PFAM: Aminotransferase class-V; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: zpr:ZPR_3672 class-V aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Selenocysteine lyase; class V aminotransferase 2129810 11054765 Murru_1932 Muricauda ruestringensis DSM 13258 class V aminotransferase YP_004788393.1 2128731 D 886377 CDS YP_004788394.1 344203251 11054766 2129968..2130264 1 NC_015945.1 PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); InterPro IPR004193; KEGG: fbc:FB2170_17281 putative isoamylase protein; PFAM: Glycoside hydrolase, family 13, N-terminal; SPTR: Putative isoamylase protein; glycoside hydrolase 2130264 11054766 Murru_1933 Muricauda ruestringensis DSM 13258 glycoside hydrolase YP_004788394.1 2129968 D 886377 CDS YP_004788395.1 344203252 11054767 complement(2130355..2130585) 1 NC_015945.1 KEGG: mtt:Ftrac_1254 hypothetical protein; hypothetical protein 2130585 11054767 Murru_1934 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788395.1 2130355 R 886377 CDS YP_004788396.1 344203253 11054768 complement(2130802..2131635) 1 NC_015945.1 PFAM: Putative esterase; COGs: COG2819 hydrolase of the alpha/beta superfamily; InterPro IPR000801; KEGG: mtt:Ftrac_1320 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Putative esterase; SPTR: Putative uncharacterized protein; esterase 2131635 11054768 Murru_1935 Muricauda ruestringensis DSM 13258 esterase YP_004788396.1 2130802 R 886377 CDS YP_004788397.1 344203254 11054769 complement(2131708..2132136) 1 NC_015945.1 PFAM: Stress responsive A/B Barrel Domain; InterPro IPR013097; KEGG: fbc:FB2170_00990 hypothetical protein; PFAM: Stress responsive alpha-beta barrel; SMART: Stress responsive alpha-beta barrel; SPTR: Stress responsive alpha-beta barrel domain protein; stress responsive alpha-beta barrel domain-containing protein 2132136 11054769 Murru_1936 Muricauda ruestringensis DSM 13258 stress responsive alpha-beta barrel domain-containing protein YP_004788397.1 2131708 R 886377 CDS YP_004788398.1 344203255 11054770 complement(2132407..2133312) 1 NC_015945.1 PFAM: RES domain; KEGG: ppn:Palpr_0141 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2133312 11054770 Murru_1937 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788398.1 2132407 R 886377 CDS YP_004788399.1 344203256 11054771 complement(2133361..2134185) 1 NC_015945.1 PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase; COGs: COG0207 Thymidylate synthase; HAMAP: Thymidylate synthase; InterPro IPR000398; KEGG: fbc:FB2170_17276 thymidylate synthase; PFAM: Thymidylate synthase; PRIAM: Thymidylate synthase; SPTR: Thymidylate synthase; TIGRFAM: Thymidylate synthase; Thymidylate synthase 2134185 11054771 Murru_1938 Muricauda ruestringensis DSM 13258 Thymidylate synthase YP_004788399.1 2133361 R 886377 CDS YP_004788400.1 344203257 11054772 complement(2134651..2136111) 1 NC_015945.1 PFAM: Na+ dependent nucleoside transporter C-terminus; Na+ dependent nucleoside transporter N-terminus; Nucleoside recognition; TIGRFAM: nucleoside transporter; COGs: COG1972 Nucleoside permease; InterPro IPR002668:IPR011642:IPR011657; KEGG: fbc:FB2170_17271 nucleoside transporter; PFAM: Na dependent nucleoside transporter, C-terminal; Na dependent nucleoside transporter; Nucleoside recognition; SPTR: Nucleoside transporter; Na+ dependent nucleoside transporter domain-containing protein 2136111 11054772 Murru_1939 Muricauda ruestringensis DSM 13258 Na+ dependent nucleoside transporter domain-containing protein YP_004788400.1 2134651 R 886377 CDS YP_004788401.1 344203258 11054773 complement(2136125..2136754) 1 NC_015945.1 PFAM: Uncharacterised ACR, COG1259; UvrB/uvrC motif; COGs: COG1259 conserved hypothetical protein; InterPro IPR003729:IPR001943; KEGG: fbc:FB2170_17266 hypothetical protein; PFAM: Domain of unknown function DUF151; UvrB/UvrC protein; SPTR: Putative uncharacterized protein; hypothetical protein 2136754 11054773 Murru_1940 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788401.1 2136125 R 886377 CDS YP_004788402.1 344203259 11054774 complement(2136844..2137812) 1 NC_015945.1 PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain; COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730:IPR014731; KEGG: fbc:FB2170_17261 electron transfer flavoprotein subunit alpha; PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha 2137812 11054774 Murru_1941 Muricauda ruestringensis DSM 13258 electron transfer flavoprotein subunit alpha YP_004788402.1 2136844 R 886377 CDS YP_004788403.1 344203260 11054775 complement(2138001..2138747) 1 NC_015945.1 PFAM: Electron transfer flavoprotein domain; COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014730; KEGG: fbc:FB2170_17256 electron transfer flavoprotein subunit beta; PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein (Beta subunit); electron transfer flavoprotein subunit alpha/beta 2138747 11054775 Murru_1942 Muricauda ruestringensis DSM 13258 electron transfer flavoprotein subunit alpha/beta YP_004788403.1 2138001 R 886377 CDS YP_004788404.1 344203261 11054776 2138916..2139896 1 NC_015945.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR005475:IPR005476; KEGG: zpr:ZPR_3658 pyruvate dehydrogenase E1 component subunit beta; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: Pyruvate dehydrogenase (acetyl-transferring); SMART: Transketolase-like, pyrimidine-binding domain; SPTR: Pyruvate dehydrogenase E1 component; pyruvate dehydrogenase (acetyl-transferring) 2139896 11054776 Murru_1943 Muricauda ruestringensis DSM 13258 pyruvate dehydrogenase (acetyl-transferring) YP_004788404.1 2138916 D 886377 CDS YP_004788405.1 344203262 11054777 2140050..2142545 1 NC_015945.1 KEGG: fbc:FB2170_17246 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2142545 11054777 Murru_1944 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788405.1 2140050 D 886377 CDS YP_004788406.1 344203263 11054778 2142784..2143311 1 NC_015945.1 PFAM: Inorganic pyrophosphatase; COGs: COG0221 Inorganic pyrophosphatase; HAMAP: Inorganic pyrophosphatase; InterPro IPR008162; KEGG: fbc:FB2170_17241 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase; PRIAM: Inorganic diphosphatase; SPTR: Inorganic pyrophosphatase; inorganic pyrophosphatase 2143311 11054778 Murru_1945 Muricauda ruestringensis DSM 13258 inorganic pyrophosphatase YP_004788406.1 2142784 D 886377 CDS YP_004788407.1 344203264 11054779 2143428..2145830 1 NC_015945.1 PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase; COGs: COG3808 Inorganic pyrophosphatase; HAMAP: Pyrophosphate-energised proton pump; InterPro IPR004131; KEGG: rbi:RB2501_03175 membrane-bound proton-translocating pyrophosphatase; PFAM: Pyrophosphate-energised proton pump; PRIAM: Inorganic diphosphatase; SPTR: Inorganic H+ pyrophosphatase; TIGRFAM: Pyrophosphate-energised proton pump; pyrophosphate-energized proton pump 2145830 11054779 Murru_1946 Muricauda ruestringensis DSM 13258 pyrophosphate-energized proton pump YP_004788407.1 2143428 D 886377 CDS YP_004788408.1 344203265 11054780 complement(2145915..2146631) 1 NC_015945.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR006260; KEGG: fbc:FB2170_03005 TonB; PFAM: TonB, C-terminal; SPTR: TonB; TIGRFAM: TonB, C-terminal; TonB family protein 2146631 11054780 Murru_1947 Muricauda ruestringensis DSM 13258 TonB family protein YP_004788408.1 2145915 R 886377 CDS YP_004788409.1 344203266 11054781 complement(2146773..2148050) 1 NC_015945.1 PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: rbi:RB2501_00846 hypothetical protein; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase 2148050 11054781 Murru_1948 Muricauda ruestringensis DSM 13258 beta-lactamase YP_004788409.1 2146773 R 886377 CDS YP_004788410.1 344203267 11054782 complement(2148152..2148769) 1 NC_015945.1 PFAM: Deoxynucleoside kinase; COGs: COG1428 Deoxynucleoside kinase; InterPro IPR001977:IPR002624; KEGG: fbc:FB2170_17221 deoxynucleoside kinase subfamily; PFAM: Deoxynucleoside kinase; Dephospho-CoA kinase; PRIAM: Deoxyadenosine kinase; SPTR: Deoxynucleoside kinase subfamily, putative; deoxyadenosine kinase 2148769 11054782 Murru_1949 Muricauda ruestringensis DSM 13258 deoxyadenosine kinase YP_004788410.1 2148152 R 886377 CDS YP_004788411.1 344203268 11054783 2149096..2150349 1 NC_015945.1 PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, N-terminal domain; S-adenosylmethionine synthetase, central domain; TIGRFAM: S-adenosylmethionine synthetase; COGs: COG0192 S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthetase; InterPro IPR002133:IPR022628:IPR022629:IPR022630; KEGG: fbc:FB2170_17206 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase, C-terminal; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal; PRIAM: Methionine adenosyltransferase; SPTR: S-adenosylmethionine synthase; TIGRFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthase 2150349 11054783 Murru_1950 Muricauda ruestringensis DSM 13258 S-adenosylmethionine synthase YP_004788411.1 2149096 D 886377 CDS YP_004788412.1 344203269 11054784 complement(2150357..2150473) 1 NC_015945.1 hypothetical protein 2150473 11054784 Murru_1951 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788412.1 2150357 R 886377 CDS YP_004788413.1 344203270 11054785 2150553..2152487 1 NC_015945.1 PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: putative hydrolase, CocE/NonD family; COGs: COG2936 acyl esterase; InterPro IPR005674:IPR000383:IPR013736; KEGG: cat:CA2559_08881 alpha-amino acid ester hydrolase; SMART: Peptidase S15/CocE/NonD, C-terminal; SPTR: X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: CocE/NonD hydrolase; hydrolase 2152487 11054785 Murru_1952 Muricauda ruestringensis DSM 13258 hydrolase YP_004788413.1 2150553 D 886377 CDS YP_004788414.1 344203271 11054786 2152817..2154091 1 NC_015945.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase; COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterPro IPR006235:IPR000277; KEGG: fps:FP0257 O-acetylhomoserine aminocarboxypropyltransferase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cysteine synthase; SPTR: Probable O-acetylhomoserine aminocarboxypropyltransferase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; O-acetylhomoserine/O-acetylserine sulfhydrylase 2154091 11054786 Murru_1953 Muricauda ruestringensis DSM 13258 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_004788414.1 2152817 D 886377 CDS YP_004788415.1 344203272 11054787 2154120..2157500 1 NC_015945.1 PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; Amino acid kinase family; alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase; aspartate kinase; COGs: COG0527 Aspartokinase; InterProIPR001341:IPR000073:IPR001048:IPR005106:IPR 001342; KEGG: fbc:FB2170_17196 bifunctional aspartokinase I/homoserine dehydrogenase I; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/glutamate/uridylate kinase; Alpha/beta hydrolase fold-1; Aspartate/homoserine dehydrogenase, NAD-binding; PRIAM: Aspartate kinase., Homoserine dehydrogenase; SPTR: Bifunctional aspartokinase I/homoserine dehydrogenase I; TIGRFAM: Aspartate kinase domain; aspartate kinase 2157500 11054787 Murru_1954 Muricauda ruestringensis DSM 13258 aspartate kinase YP_004788415.1 2154120 D 886377 CDS YP_004788416.1 344203273 11054788 2157576..2158742 1 NC_015945.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine sulfhydrylase; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: fbc:FB2170_17191 O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Methionine gamma-lyase; SPTR: O-succinylhomoserine sulfhydrylase; methionine gamma-lyase 2158742 11054788 Murru_1955 Muricauda ruestringensis DSM 13258 methionine gamma-lyase YP_004788416.1 2157576 D 886377 CDS YP_004788417.1 344203274 11054789 2158798..2159205 1 NC_015945.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: fbc:FB2170_17186 BadM/Rrf2 family transcriptional regulator; PFAM: Transcription regulator Rrf2; SPTR: Transcriptional regulator, BadM/Rrf2 family protein; TIGRFAM: Transcription regulator Rrf2; BadM/Rrf2 family transcriptional regulator 2159205 11054789 Murru_1956 Muricauda ruestringensis DSM 13258 BadM/Rrf2 family transcriptional regulator YP_004788417.1 2158798 D 886377 CDS YP_004788418.1 344203275 11054790 2159384..2159647 1 NC_015945.1 PFAM: Predicted membrane protein (DUF2061); InterPro IPR018638; KEGG: fbc:FB2170_17181 hypothetical protein; PFAM: Protein of unknown function DUF2061, membrane; SPTR: Putative uncharacterized protein; hypothetical protein 2159647 11054790 Murru_1957 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788418.1 2159384 D 886377 CDS YP_004788419.1 344203276 11054791 2159659..2160282 1 NC_015945.1 PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: phosophoadenylyl-sulfate reductase (thioredoxin); COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR002500; KEGG: fbc:FB2170_17176 putative 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase; PFAM: Phosphoadenosine phosphosulphate reductase; SPTR: Possible 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase; phosphoadenosine phosphosulfate reductase 2160282 11054791 Murru_1958 Muricauda ruestringensis DSM 13258 phosphoadenosine phosphosulfate reductase YP_004788419.1 2159659 D 886377 CDS YP_004788420.1 344203277 11054792 2160337..2161284 1 NC_015945.1 PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit; COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR011784:IPR002500; KEGG: fbc:FB2170_17171 sulfate adenylyltransferase subunit 2; PFAM: Phosphoadenosine phosphosulphate reductase; PRIAM: Sulfate adenylyltransferase; SPTR: Sulfate adenylyltransferase subunit 2; TIGRFAM: Sulphate adenylyltransferase, small subunit; sulfate adenylyltransferase 2161284 11054792 Murru_1959 Muricauda ruestringensis DSM 13258 sulfate adenylyltransferase YP_004788420.1 2160337 D 886377 CDS YP_004788421.1 344203278 11054793 2161333..2162580 1 NC_015945.1 PFAM: Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain; COGs: COG2895 GTPase - Sulfate adenylate transferase subunit 1; InterPro IPR011779:IPR000795; KEGG: fbc:FB2170_17166 sulfate adenylyltransferase subunit 1; PFAM: Protein synthesis factor, GTP-binding; PRIAM: Sulfate adenylyltransferase; SPTR: Sulfate adenylyltransferase subunit 1; TIGRFAM: Sulphate adenylyltransferase, large subunit; sulfate adenylyltransferase 2162580 11054793 Murru_1960 Muricauda ruestringensis DSM 13258 sulfate adenylyltransferase YP_004788421.1 2161333 D 886377 CDS YP_004788422.1 344203279 11054794 2162655..2164745 1 NC_015945.1 PFAM: HEPN domain; Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; COGs: COG0155 Sulfite reductase beta subunit (hemoprotein); InterPro IPR005117:IPR006067:IPR007842; KEGG: fbc:FB2170_17161 putative sulfite reductase; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; HEPN; PRIAM: Ferredoxin--nitrite reductase; SPTR: Probable sulfite reductase; ferredoxin--nitrite reductase 2164745 11054794 Murru_1961 Muricauda ruestringensis DSM 13258 ferredoxin--nitrite reductase YP_004788422.1 2162655 D 886377 CDS YP_004788423.1 344203280 11054795 2164738..2165514 1 NC_015945.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR006366:IPR000878; KEGG: fbc:FB2170_17156 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; PRIAM: Uroporphyrinogen-III C-methyltransferase; SPTR: Uroporphyrin-III C-methyltransferase; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; uroporphyrin-III C-methyltransferase 2165514 11054795 Murru_1962 Muricauda ruestringensis DSM 13258 uroporphyrin-III C-methyltransferase YP_004788423.1 2164738 D 886377 CDS YP_004788424.1 344203281 11054796 2165588..2166649 1 NC_015945.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG0492 Thioredoxin reductase; HAMAP: Ferredoxin--NADP reductase, type 2; InterPro IPR013027:IPR022890; KEGG: rbi:RB2501_03115 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Ferredoxin--NADP(+) reductase; SPTR: Thioredoxin reductase; ferredoxin--NADP reductase 2166649 11054796 Murru_1963 Muricauda ruestringensis DSM 13258 ferredoxin--NADP reductase YP_004788424.1 2165588 D 886377 CDS YP_004788425.1 344203282 11054797 2166737..2167654 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: fjo:Fjoh_4278 helix-turn-helix domain-containing protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family; AraC family transcriptional regulator 2167654 11054797 Murru_1964 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004788425.1 2166737 D 886377 CDS YP_004788426.1 344203283 11054798 2167898..2168659 1 NC_015945.1 PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: fjo:Fjoh_4280 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Possible oxidoreductase; short-chain dehydrogenase/reductase SDR 2168659 11054798 Murru_1965 Muricauda ruestringensis DSM 13258 short-chain dehydrogenase/reductase SDR YP_004788426.1 2167898 D 886377 CDS YP_004788427.1 344203284 11054799 2169020..2170021 1 NC_015945.1 PFAM: Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; COGs: COG0646 Methionine synthase I (cobalamin-dependent) methyltransferase domain; InterPro IPR003726; KEGG: fbc:FB2170_17141 5-methyltetrahydrofolate--homocysteine methyltransferase; PFAM: Homocysteine S-methyltransferase; PRIAM: Methionine synthase; SPTR: 5-methyltetrahydrofolate--homocysteine methyltransferase; methionine synthase 2170021 11054799 Murru_1966 Muricauda ruestringensis DSM 13258 methionine synthase YP_004788427.1 2169020 D 886377 CDS YP_004788428.1 344203285 11054800 2170031..2172787 1 NC_015945.1 PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; COGs: COG1410 Methionine synthase I cobalamin-binding domain; InterProIPR011822:IPR000489:IPR003759:IPR006158:IPR 004223; KEGG: fbc:FB2170_17131 5-methyltetrahydrofolate--homocysteine methyltransferase; PFAM: Vitamin B12-dependent methionine synthase, activation domain; Pterin-binding; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; PRIAM: Methionine synthase; SPTR: 5-methyltetrahydrofolate--homocysteine methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; methionine synthase 2172787 11054800 Murru_1967 Muricauda ruestringensis DSM 13258 methionine synthase YP_004788428.1 2170031 D 886377 CDS YP_004788429.1 344203286 11054801 2172791..2173744 1 NC_015945.1 PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form; COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR004620:IPR003171; KEGG: fbc:FB2170_17126 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; PRIAM: Methylenetetrahydrofolate reductase (NAD(P)H); SPTR: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 2173744 11054801 Murru_1968 Muricauda ruestringensis DSM 13258 5,10-methylenetetrahydrofolate reductase YP_004788429.1 2172791 D 886377 CDS YP_004788430.1 344203287 11054802 2173915..2175015 1 NC_015945.1 PFAM: Lipid A 3-O-deacylase (PagL); InterPro IPR018550; KEGG: fbc:FB2170_17121 hypothetical protein; PFAM: Lipid A 3-O-deacylase-related; SPTR: Putative uncharacterized protein; lipid A 3-O-deacylase-like protein 2175015 11054802 Murru_1969 Muricauda ruestringensis DSM 13258 lipid A 3-O-deacylase-like protein YP_004788430.1 2173915 D 886377 CDS YP_004788431.1 344203288 11054803 2175012..2175815 1 NC_015945.1 PFAM: Protein of unknown function (DUF2807); KEGG: fbc:FB2170_17116 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2175815 11054803 Murru_1970 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788431.1 2175012 D 886377 CDS YP_004788432.1 344203289 11054804 2175891..2177003 1 NC_015945.1 PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: fbc:FB2170_17111 FmtA-like protein; PFAM: Beta-lactamase-related; SPTR: FmtA-like protein; manually curated; beta-lactamase 2177003 11054804 Murru_1971 Muricauda ruestringensis DSM 13258 beta-lactamase YP_004788432.1 2175891 D 886377 CDS YP_004788433.1 344203290 11054805 complement(2177000..2178451) 1 NC_015945.1 PFAM: Pyridoxal-dependent decarboxylase conserved domain; COGs: COG0076 Glutamate decarboxylase and related PLP-dependent protein; InterPro IPR002129; KEGG: cat:CA2559_04970 decarboxylase, pyridoxal-dependent; PFAM: Pyridoxal phosphate-dependent decarboxylase; PRIAM: Aromatic-L-amino-acid decarboxylase; SPTR: Decarboxylase, pyridoxal-dependent; aromatic-L-amino-acid decarboxylase 2178451 11054805 Murru_1972 Muricauda ruestringensis DSM 13258 aromatic-L-amino-acid decarboxylase YP_004788433.1 2177000 R 886377 CDS YP_004788434.1 344203291 11054806 complement(2178546..2179439) 1 NC_015945.1 PFAM: ABC transporter; TIGRFAM: gliding motility-associated ABC transporter ATP-binding subunit GldA; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR019864:IPR003439:IPR003593; KEGG: rbi:RB2501_03070 ABC-type multidrug transport system ATPase; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type multidrug transporter, ATP-binding protein; gliding motility-associated protein; TIGRFAM: Gliding motility-associated ABC transporter ATP-binding subunit GldA; gliding motility-associated ABC transporter ATP-binding subunit GldA 2179439 11054806 Murru_1973 Muricauda ruestringensis DSM 13258 gliding motility-associated ABC transporter ATP-binding subunit GldA YP_004788434.1 2178546 R 886377 CDS YP_004788435.1 344203292 11054807 2179977..2180807 1 NC_015945.1 PFAM: Prephenate dehydratase; COGs: COG0077 Prephenate dehydratase; InterPro IPR001086; KEGG: fbc:FB2170_17106 putative prefrenate dehydratase; PFAM: Prephenate dehydratase; PRIAM: Prephenate dehydratase; SPTR: Putative prefrenate dehydratase; Prephenate dehydratase 2180807 11054807 Murru_1974 Muricauda ruestringensis DSM 13258 Prephenate dehydratase YP_004788435.1 2179977 D 886377 CDS YP_004788436.1 344203293 11054808 2180807..2181949 1 NC_015945.1 PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: fbc:FB2170_17101 putative aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: LL-diaminopimelate aminotransferase; SPTR: Putative aminotransferase; LL-diaminopimelate aminotransferase 2181949 11054808 Murru_1975 Muricauda ruestringensis DSM 13258 LL-diaminopimelate aminotransferase YP_004788436.1 2180807 D 886377 CDS YP_004788437.1 344203294 11054809 2181953..2182813 1 NC_015945.1 PFAM: Prephenate dehydrogenase; COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099; KEGG: fbc:FB2170_17096 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; PRIAM: Prephenate dehydrogenase; SPTR: Prephenate dehydrogenase; prephenate dehydrogenase 2182813 11054809 Murru_1976 Muricauda ruestringensis DSM 13258 prephenate dehydrogenase YP_004788437.1 2181953 D 886377 CDS YP_004788438.1 344203295 11054810 2182822..2183904 1 NC_015945.1 PFAM: Chorismate mutase type II; DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006218:IPR020822:IPR002701; KEGG: rbi:RB2501_03045 putative phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase; PFAM: DAHP synthetase I/KDSA; Chorismate mutase, type II; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SMART: Chorismate mutase; SPTR: Putative phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase; 3-deoxy-7-phosphoheptulonate synthase 2183904 11054810 Murru_1977 Muricauda ruestringensis DSM 13258 3-deoxy-7-phosphoheptulonate synthase YP_004788438.1 2182822 D 886377 CDS YP_004788439.1 344203296 11054811 2184039..2184713 1 NC_015945.1 PFAM: Protein of unknown function (DUF2807); KEGG: fbc:FB2170_17086 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2184713 11054811 Murru_1978 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788439.1 2184039 D 886377 CDS YP_004788440.1 344203297 11054812 complement(2184770..2185408) 1 NC_015945.1 KEGG: gfo:GFO_0344 secreted protein; SPTR: Secreted protein; hypothetical protein 2185408 11054812 Murru_1979 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788440.1 2184770 R 886377 CDS YP_004788441.1 344203298 11054813 complement(2185569..2186009) 1 NC_015945.1 KEGG: rbi:RB2501_03035 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2186009 11054813 Murru_1980 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788441.1 2185569 R 886377 CDS YP_004788442.1 344203299 11054814 2186104..2187042 1 NC_015945.1 PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A; COGs: COG1162 GTPase; HAMAP: Ribosome biogenesis GTPase RsgA, putative; InterPro IPR004881; KEGG: fbc:FB2170_17071 ribosome-associated GTPase; PFAM: Ribosome biogenesis GTPase RsgA, putative; SPTR: Putative ribosome biogenesis GTPase RsgA 2; TIGRFAM: Ribosome biogenesis GTPase RsgA, putative; ribosome biogenesis GTPase RsgA 2187042 11054814 Murru_1981 Muricauda ruestringensis DSM 13258 ribosome biogenesis GTPase RsgA YP_004788442.1 2186104 D 886377 CDS YP_004788443.1 344203300 11054815 2187042..2187494 1 NC_015945.1 PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; COGs: COG1490 D-Tyr-tRNAtyr deacylase; HAMAP: D-tyrosyl-tRNA(Tyr) deacylase; InterPro IPR003732; KEGG: fbc:FB2170_17066 D-tyrosyl-tRNA deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; SPTR: D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase 2187494 11054815 Murru_1982 Muricauda ruestringensis DSM 13258 D-tyrosyl-tRNA(Tyr) deacylase YP_004788443.1 2187042 D 886377 CDS YP_004788444.1 344203301 11054816 2187578..2189479 1 NC_015945.1 PFAM: Transglutaminase-like superfamily; KEGG: fjo:Fjoh_0511 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2189479 11054816 Murru_1983 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788444.1 2187578 D 886377 CDS YP_004788445.1 344203302 11054817 2189476..2191488 1 NC_015945.1 PFAM: Transglutaminase-like superfamily; InterPro IPR002931; KEGG: fjo:Fjoh_0510 hypothetical protein; PFAM: Transglutaminase-like; SPTR: Putative uncharacterized protein; transglutaminase 2191488 11054817 Murru_1984 Muricauda ruestringensis DSM 13258 transglutaminase YP_004788445.1 2189476 D 886377 CDS YP_004788446.1 344203303 11054818 2191496..2193457 1 NC_015945.1 KEGG: zpr:ZPR_3234 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2193457 11054818 Murru_1985 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788446.1 2191496 D 886377 CDS YP_004788447.1 344203304 11054819 2193504..2193830 1 NC_015945.1 PFAM: MazG nucleotide pyrophosphohydrolase domain; InterPro IPR004518; KEGG: fps:FP0242 hypothetical protein; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core; SPTR: Putative uncharacterized protein; MazG nucleotide pyrophosphohydrolase 2193830 11054819 Murru_1986 Muricauda ruestringensis DSM 13258 MazG nucleotide pyrophosphohydrolase YP_004788447.1 2193504 D 886377 CDS YP_004788448.1 344203305 11054820 2193900..2195129 1 NC_015945.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase; InterPro IPR001986:IPR006264; KEGG: fbc:FB2170_17056 putative 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: Enolpyruvate transferase domain; PRIAM: 3-phosphoshikimate 1-carboxyvinyltransferase; SPTR: 3-phosphoshikimate 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase 2195129 11054820 Murru_1987 Muricauda ruestringensis DSM 13258 3-phosphoshikimate 1-carboxyvinyltransferase YP_004788448.1 2193900 D 886377 CDS YP_004788449.1 344203306 11054821 2195215..2196264 1 NC_015945.1 PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); HAMAP: Queuosine biosynthesis protein; InterPro IPR003699; KEGG: fbc:FB2170_17051 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; SPTR: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: Queuosine biosynthesis protein; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 2196264 11054821 Murru_1988 Muricauda ruestringensis DSM 13258 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_004788449.1 2195215 D 886377 CDS YP_004788450.1 344203307 11054822 2196498..2197538 1 NC_015945.1 PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase; COGs: COG0820 Fe-S-cluster redox enzyme; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; InterPro IPR004383:IPR007197:IPR006638; KEGG: fbc:FB2170_17046 radical SAM enzyme, Cfr family protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Ribosomal RNA large subunit methyltransferase N; TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; ribosomal RNA large subunit methyltransferase N 2197538 11054822 Murru_1989 Muricauda ruestringensis DSM 13258 ribosomal RNA large subunit methyltransferase N YP_004788450.1 2196498 D 886377 CDS YP_004788451.1 344203308 11054823 2197718..2198692 1 NC_015945.1 PFAM: Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: fbc:FB2170_17041 polyprenyl synthetase; PFAM: Polyprenyl synthetase; PRIAM: Trans-hexaprenyltranstransferase; SPTR: Polyprenyl synthetase; manually curated; trans-hexaprenyltranstransferase 2198692 11054823 Murru_1990 Muricauda ruestringensis DSM 13258 trans-hexaprenyltranstransferase YP_004788451.1 2197718 D 886377 CDS YP_004788452.1 344203309 11054824 2198802..2199377 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: fbc:FB2170_17036 putative ECF family RNA polymerase sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: Putative RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 2199377 11054824 Murru_1991 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004788452.1 2198802 D 886377 CDS YP_004788453.1 344203310 11054825 2199382..2200107 1 NC_015945.1 KEGG: fbc:FB2170_17031 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2200107 11054825 Murru_1992 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788453.1 2199382 D 886377 CDS YP_004788454.1 344203311 11054826 2200193..2201263 1 NC_015945.1 KEGG: fbc:FB2170_17026 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2201263 11054826 Murru_1993 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788454.1 2200193 D 886377 CDS YP_004788455.1 344203312 11054827 complement(2201333..2201575) 1 NC_015945.1 KEGG: fbc:FB2170_17021 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2201575 11054827 Murru_1994 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788455.1 2201333 R 886377 CDS YP_004788456.1 344203313 11054828 2201722..2202312 1 NC_015945.1 PFAM: 2OG-Fe(II) oxygenase superfamily; COGs: COG3751 proline hydroxylase; InterPro IPR005123:IPR006620; KEGG: svo:SVI_4108 SM-20 domain-containing protein; PFAM: Oxoglutarate/iron-dependent oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit; SPTR: 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 2202312 11054828 Murru_1995 Muricauda ruestringensis DSM 13258 2OG-Fe(II) oxygenase YP_004788456.1 2201722 D 886377 CDS YP_004788457.1 344203314 11054829 complement(2202313..2202621) 1 NC_015945.1 KEGG: mtt:Ftrac_2067 phosphoribosylpyrophosphate synthetase; SPTR: Putative uncharacterized protein; phosphoribosylpyrophosphate synthetase 2202621 11054829 Murru_1996 Muricauda ruestringensis DSM 13258 phosphoribosylpyrophosphate synthetase YP_004788457.1 2202313 R 886377 CDS YP_004788458.1 344203315 11054830 complement(2202937..2204760) 1 NC_015945.1 PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: putative hydrolase, CocE/NonD family; COGs: COG2936 acyl esterase; InterPro IPR000383:IPR013736; KEGG: fbc:FB2170_10211 x-prolyl-dipeptidyl aminopeptidase; PRIAM: Xaa-Pro dipeptidyl-peptidase; SMART: Peptidase S15/CocE/NonD, C-terminal; SPTR: X-prolyl-dipeptidyl aminopeptidase; Xaa-Pro dipeptidyl-peptidase 2204760 11054830 Murru_1997 Muricauda ruestringensis DSM 13258 Xaa-Pro dipeptidyl-peptidase YP_004788458.1 2202937 R 886377 CDS YP_004788459.1 344203316 11054831 2204986..2206959 1 NC_015945.1 PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core; COGs: COG0358 DNA primase; InterPro IPR006295:IPR002694:IPR013264:IPR006171; KEGG: fbc:FB2170_17016 putative DNA primase; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain; SPTR: Putative DNA primase; TIGRFAM: DNA primase, DnaG; DNA primase 2206959 11054831 Murru_1998 Muricauda ruestringensis DSM 13258 DNA primase YP_004788459.1 2204986 D 886377 CDS YP_004788460.1 344203317 11054832 complement(2207027..2207656) 1 NC_015945.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: fbc:FB2170_17011 two component transcriptional regulator, LuxR family protein; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SPTR: Two component transcriptional regulator, LuxR family protein; two component LuxR family transcriptional regulator 2207656 11054832 Murru_1999 Muricauda ruestringensis DSM 13258 two component LuxR family transcriptional regulator YP_004788460.1 2207027 R 886377 CDS YP_004788461.1 344203318 11054833 complement(2207815..2208603) 1 NC_015945.1 PFAM: NAD synthase; TIGRFAM: NAD+ synthetase; COGs: COG0171 NAD synthase; InterPro IPR003694:IPR022310; KEGG: rbi:RB2501_02950 putative NH(3)-dependent NAD synthetase; PFAM: NAD/GMP synthase; SPTR: NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD synthase; NAD+ synthetase 2208603 11054833 Murru_2000 Muricauda ruestringensis DSM 13258 NAD+ synthetase YP_004788461.1 2207815 R 886377 CDS YP_004788462.1 344203319 11054834 2208634..2209656 1 NC_015945.1 TIGRFAM: gliding motility-associated lipoprotein GldB; InterPro IPR019853; KEGG: fbc:FB2170_17001 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Gliding motility-associated lipoprotein, GldB; gliding motility-associated lipoprotein GldB 2209656 11054834 Murru_2001 Muricauda ruestringensis DSM 13258 gliding motility-associated lipoprotein GldB YP_004788462.1 2208634 D 886377 CDS YP_004788463.1 344203320 11054835 2209660..2209995 1 NC_015945.1 TIGRFAM: gliding motility-associated protein GldC; InterPro IPR019854; KEGG: fbc:FB2170_16996 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Gliding motility-associated protein, GldC; gliding motility-associated protein GldC 2209995 11054835 Murru_2002 Muricauda ruestringensis DSM 13258 gliding motility-associated protein GldC YP_004788463.1 2209660 D 886377 CDS YP_004788464.1 344203321 11054836 complement(2210162..2210659) 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 2210659 11054836 Murru_2003 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788464.1 2210162 R 886377 CDS YP_004788465.1 344203322 11054837 complement(2210916..2211644) 1 NC_015945.1 PFAM: Pirin; COGs: COG1741 Pirin-related protein; InterPro IPR003829; KEGG: fba:FIC_00549 possible pirin family protein; PFAM: Pirin, N-terminal; SPTR: Putative Pirin family proteins; Pirin domain-containing protein 2211644 11054837 Murru_2004 Muricauda ruestringensis DSM 13258 Pirin domain-containing protein YP_004788465.1 2210916 R 886377 CDS YP_004788466.1 344203323 11054838 complement(2211749..2212363) 1 NC_015945.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; COGs: COG0218 GTPase; HAMAP: GTP-binding protein, ribosome biogenesis, YsxC; InterPro IPR019987:IPR002917; KEGG: fbc:FB2170_16976 putative GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; SPTR: Probable GTP-binding protein engB; TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC; GTP-binding protein engB 2212363 11054838 Murru_2005 Muricauda ruestringensis DSM 13258 GTP-binding protein engB YP_004788466.1 2211749 R 886377 CDS YP_004788467.1 344203324 11054839 complement(2212366..2213130) 1 NC_015945.1 PFAM: alpha/beta hydrolase fold; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: rbi:RB2501_02910 beta-D-galactosidase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Beta-D-galactosidase, putative; alpha/beta hydrolase fold protein 2213130 11054839 Murru_2006 Muricauda ruestringensis DSM 13258 alpha/beta hydrolase fold protein YP_004788467.1 2212366 R 886377 CDS YP_004788468.1 344203325 11054840 2213395..2213850 1 NC_015945.1 PFAM: MraZ protein; TIGRFAM: mraZ protein; COGs: COG2001 conserved hypothetical protein; HAMAP: MraZ; InterPro IPR003444:IPR020603; KEGG: rbi:RB2501_02900 MraZ protein; PFAM: MraZ domain; SPTR: Protein MraZ; TIGRFAM: MraZ; protein mraZ 2213850 11054840 Murru_2007 Muricauda ruestringensis DSM 13258 protein mraZ YP_004788468.1 2213395 D 886377 CDS YP_004788469.1 344203326 11054841 2213843..2214745 1 NC_015945.1 PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW; COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW; InterPro IPR002903; KEGG: fbc:FB2170_16956 S-adenosyl-methyltransferase MraW; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; SPTR: Ribosomal RNA small subunit methyltransferase H; TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; ribosomal RNA small subunit methyltransferase H 2214745 11054841 Murru_2008 Muricauda ruestringensis DSM 13258 ribosomal RNA small subunit methyltransferase H YP_004788469.1 2213843 D 886377 CDS YP_004788470.1 344203327 11054842 2214861..2215178 1 NC_015945.1 KEGG: fbc:FB2170_16951 S-adenosyl-methyltransferase MraW; SPTR: S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 2215178 11054842 Murru_2009 Muricauda ruestringensis DSM 13258 S-adenosyl-methyltransferase MraW YP_004788470.1 2214861 D 886377 CDS YP_004788471.1 344203328 11054843 2215178..2217187 1 NC_015945.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; PASTA domain; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR001460:IPR005543; KEGG: fbc:FB2170_16946 penicillin-binding protein; PFAM: Penicillin-binding protein, transpeptidase; PASTA; PRIAM: Peptidoglycan glycosyltransferase; SMART: PASTA; SPTR: Penicillin-binding protein; peptidoglycan glycosyltransferase 2217187 11054843 Murru_2010 Muricauda ruestringensis DSM 13258 peptidoglycan glycosyltransferase YP_004788471.1 2215178 D 886377 CDS YP_004788472.1 344203329 11054844 2217184..2218647 1 NC_015945.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; HAMAP:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-di aminopimelateligase; InterPro IPR005761:IPR000713:IPR013221:IPR004101; KEGG: fbc:FB2170_16941 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; PRIAM:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelateligase; SPTR: UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelateligase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 2218647 11054844 Murru_2011 Muricauda ruestringensis DSM 13258 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase YP_004788472.1 2217184 D 886377 CDS YP_004788473.1 344203330 11054845 2218711..2219931 1 NC_015945.1 PFAM: Glycosyl transferase family 4; Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; InterPro IPR003524:IPR018480:IPR000715; KEGG: rbi:RB2501_02875 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; SPTR:Phospho-N-acetylmuramoyl-pentapeptide-transfer ase; TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase 2219931 11054845 Murru_2012 Muricauda ruestringensis DSM 13258 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_004788473.1 2218711 D 886377 CDS YP_004788474.1 344203331 11054846 2219932..2221266 1 NC_015945.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; COGs: COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase; InterPro IPR005762:IPR013221:IPR004101; KEGG: fbc:FB2170_16931 putative UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: Mur ligase, central; Mur ligase, C-terminal; PRIAM: UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; SPTR: UDP-N-acetylmuramoylalanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase 2221266 11054846 Murru_2013 Muricauda ruestringensis DSM 13258 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_004788474.1 2219932 D 886377 CDS YP_004788475.1 344203332 11054847 2221270..2222475 1 NC_015945.1 PFAM: Cell cycle protein; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: fbc:FB2170_16926 putative transmembrane rod-shape determining protein; PFAM: Cell cycle protein; SPTR: Putative transmembrane rod-shape determining protein; cell cycle protein 2222475 11054847 Murru_2014 Muricauda ruestringensis DSM 13258 cell cycle protein YP_004788475.1 2221270 D 886377 CDS YP_004788476.1 344203333 11054848 2222462..2223550 1 NC_015945.1 PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; HAMAP: N-acetylglucosaminyltransferase, MurG; InterPro IPR006009:IPR004276:IPR007235; KEGG: fbc:FB2170_16921 N-acetylglucosaminyl transferase; PFAM: Glycosyl transferase, family 28, C-terminal; Glycosyl transferase, family 28; SPTR:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: N-acetylglucosaminyltransferase, MurG; UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N- acetylglucosamine transferase 2223550 11054848 Murru_2015 Muricauda ruestringensis DSM 13258 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N- acetylglucosamine transferase YP_004788476.1 2222462 D 886377 CDS YP_004788477.1 344203334 11054849 2223547..2224896 1 NC_015945.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase; COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; InterPro IPR005758:IPR000713:IPR013221:IPR004101; KEGG: fbc:FB2170_16916 UDP-N-acetylmuramate--L-alanine ligase; PFAM: Mur ligase, C-terminal; Mur ligase, central; Mur ligase, N-terminal; PRIAM: UDP-N-acetylmuramate--L-alanine ligase; SPTR: UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate--L-alanine ligase 2224896 11054849 Murru_2016 Muricauda ruestringensis DSM 13258 UDP-N-acetylmuramate--L-alanine ligase YP_004788477.1 2223547 D 886377 CDS YP_004788478.1 344203335 11054850 2224886..2225605 1 NC_015945.1 KEGG: fbc:FB2170_16911 putative cell division protein; SPTR: Putative cell division protein; putative cell division protein 2225605 11054850 Murru_2017 Muricauda ruestringensis DSM 13258 putative cell division protein YP_004788478.1 2224886 D 886377 CDS YP_004788479.1 344203336 11054851 2225609..2226937 1 NC_015945.1 PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; COGs: COG0849 Actin-like ATPase involved in cell division; InterPro IPR020823:IPR003494; KEGG: fbc:FB2170_16906 cell division protein FtsA; PFAM: Cell division protein FtsA domain; SMART: Cell division protein FtsA domain; SPTR: Cell division protein FtsA; TIGRFAM: Cell division protein family FtsA; cell division protein FtsA 2226937 11054851 Murru_2018 Muricauda ruestringensis DSM 13258 cell division protein FtsA YP_004788479.1 2225609 D 886377 CDS YP_004788480.1 344203337 11054852 2226965..2228968 1 NC_015945.1 PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ; COGs: COG0206 Cell division GTPase; InterPro IPR000158:IPR003008:IPR018316; KEGG: fbc:FB2170_16901 cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; SMART: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; SPTR: Cell division protein ftsZ; TIGRFAM: Cell division protein FtsZ, N-terminal; cell division protein FtsZ 2228968 11054852 Murru_2019 Muricauda ruestringensis DSM 13258 cell division protein FtsZ YP_004788480.1 2226965 D 886377 CDS YP_004788481.1 344203338 11054853 2229069..2229521 1 NC_015945.1 PFAM: Yqey-like protein; COGs: COG1610 conserved hypothetical protein; InterPro IPR019004; KEGG: fbc:FB2170_16896 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2229521 11054853 Murru_2020 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788481.1 2229069 D 886377 CDS YP_004788482.1 344203339 11054855 complement(2229666..2230199) 1 NC_015945.1 PFAM: RibD C-terminal domain; COGs: COG0262 Dihydrofolate reductase; InterPro IPR002734; KEGG: scl:sce1370 dihydrofolate reductase family protein; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; SPTR: Riboflavin biosynthesis protein RibD; bifunctional deaminase-reductase domain-containing protein 2230199 11054855 Murru_2021 Muricauda ruestringensis DSM 13258 bifunctional deaminase-reductase domain-containing protein YP_004788482.1 2229666 R 886377 CDS YP_004788483.1 344203340 11054856 complement(2230207..2230602) 1 NC_015945.1 KEGG: hoh:Hoch_1634 hypothetical protein; SPTR: Conserved uncharacterized protein; hypothetical protein 2230602 11054856 Murru_2022 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788483.1 2230207 R 886377 CDS YP_004788484.1 344203341 11054857 complement(2230631..2231164) 1 NC_015945.1 KEGG: fbc:FB2170_14273 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2231164 11054857 Murru_2023 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788484.1 2230631 R 886377 CDS YP_004788485.1 344203342 11054858 complement(2231221..2231757) 1 NC_015945.1 PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: fps:FP0009 cAMP-binding protein; PFAM: Cyclic nucleotide-binding domain; SPTR: Probable cAMP-binding protein; putative Crp/Fnr family transcriptional regulator 2231757 11054858 Murru_2024 Muricauda ruestringensis DSM 13258 putative Crp/Fnr family transcriptional regulator YP_004788485.1 2231221 R 886377 CDS YP_004788486.1 344203343 11054859 complement(2231795..2232346) 1 NC_015945.1 KEGG: apb:SAR116_0491 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2232346 11054859 Murru_2025 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788486.1 2231795 R 886377 CDS YP_004788487.1 344203344 11054860 complement(2232771..2233349) 1 NC_015945.1 KEGG: cpi:Cpin_2200 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2233349 11054860 Murru_2026 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788487.1 2232771 R 886377 CDS YP_004788488.1 344203345 11054861 complement(2233640..2234242) 1 NC_015945.1 KEGG: fjo:Fjoh_1346 hypothetical protein; SPTR: Hypothetical lipoprotein; hypothetical protein 2234242 11054861 Murru_2027 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788488.1 2233640 R 886377 CDS YP_004788489.1 344203346 11054862 2234652..2235101 1 NC_015945.1 KEGG: cat:CA2559_01845 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2235101 11054862 Murru_2028 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788489.1 2234652 D 886377 CDS YP_004788490.1 344203347 11054863 2235162..2235647 1 NC_015945.1 KEGG: fps:FP0701 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2235647 11054863 Murru_2029 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788490.1 2235162 D 886377 CDS YP_004788491.1 344203348 11054864 2235635..2236351 1 NC_015945.1 PFAM: Protein of unknown function (DUF833); KEGG: fps:FP0700 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2236351 11054864 Murru_2030 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788491.1 2235635 D 886377 CDS YP_004788492.1 344203349 11054865 2236357..2237397 1 NC_015945.1 KEGG: fps:FP0699 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2237397 11054865 Murru_2031 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788492.1 2236357 D 886377 CDS YP_004788493.1 344203350 11054866 complement(2237405..2237878) 1 NC_015945.1 PFAM: Glutathione peroxidase; COGs: COG0386 Glutathione peroxidase; InterPro IPR000889; KEGG: mtt:Ftrac_0469 peroxiredoxin; PFAM: Glutathione peroxidase; PRIAM: Peroxiredoxin; SPTR: Glutathione peroxidase; peroxiredoxin 2237878 11054866 Murru_2032 Muricauda ruestringensis DSM 13258 peroxiredoxin YP_004788493.1 2237405 R 886377 CDS YP_004788494.1 344203351 11054867 complement(2237881..2238309) 1 NC_015945.1 KEGG: mtt:Ftrac_0470 hypothetical protein; SPTR: Membrane protein; hypothetical protein 2238309 11054867 Murru_2033 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788494.1 2237881 R 886377 CDS YP_004788495.1 344203352 11054868 complement(2238392..2239378) 1 NC_015945.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: putative bacillithiol system thiol disulfide oxidoreductase, YpdA family; COGs: COG0492 Thioredoxin reductase; InterPro IPR013027; KEGG: rbi:RB2501_02750 pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Pyridine nucleotide-disulphide oxidoreductase, putative; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2239378 11054868 Murru_2034 Muricauda ruestringensis DSM 13258 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004788495.1 2238392 R 886377 CDS YP_004788496.1 344203353 11054869 complement(2239378..2240037) 1 NC_015945.1 PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: fbc:FB2170_16851 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Ribulose-phosphate 3-epimerase; TIGRFAM: Ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase 2240037 11054869 Murru_2035 Muricauda ruestringensis DSM 13258 ribulose-phosphate 3-epimerase YP_004788496.1 2239378 R 886377 CDS YP_004788497.1 344203354 11054870 complement(2240225..2241088) 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR014284:IPR009042:IPR007627:IPR007624:IPR 007630; KEGG: rbi:RB2501_02735 putative sigma factor A; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 3; SPTR: Putative sigma factor A; TIGRFAM: RNA polymerase sigma-70; RpoD subfamily RNA polymerase sigma-70 subunit 2241088 11054870 Murru_2036 Muricauda ruestringensis DSM 13258 RpoD subfamily RNA polymerase sigma-70 subunit YP_004788497.1 2240225 R 886377 CDS YP_004788498.1 344203355 11054871 complement(2241413..2243644) 1 NC_015945.1 PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase; COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); HAMAP: Polyribonucleotide nucleotidyltransferase; InterProIPR012162:IPR001247:IPR015847:IPR015848:IPR 018111:IPR003029:IPR004087:IPR022967; KEGG: cat:CA2559_12288 putative polyribonucleotide nucleotidyltransferase; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA-binding domain; PRIAM: Polyribonucleotide nucleotidyltransferase; SMART: RNA-binding domain, S1; K Homology; SPTR: Polyribonucleotide nucleotidyltransferase; TIGRFAM: Polyribonucleotide nucleotidyltransferase; polyribonucleotide nucleotidyltransferase 2243644 11054871 Murru_2037 Muricauda ruestringensis DSM 13258 polyribonucleotide nucleotidyltransferase YP_004788498.1 2241413 R 886377 CDS YP_004788499.1 344203356 11054872 complement(2243867..2244136) 1 NC_015945.1 PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle; COGs: COG0184 Ribosomal protein S15P/S13E; InterPro IPR005290:IPR000589; KEGG: fbc:FB2170_16806 putative 30S ribosomal protein S15; PFAM: Ribosomal protein S15; SPTR: 30S ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; 30S ribosomal protein S15 2244136 11054872 Murru_2038 Muricauda ruestringensis DSM 13258 30S ribosomal protein S15 YP_004788499.1 2243867 R 886377 CDS YP_004788500.1 344203357 11054873 complement(2244454..2245314) 1 NC_015945.1 PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; COGs: COG0777 Acetyl-CoA carboxylase beta subunit; HAMAP: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; InterPro IPR000438:IPR000022; KEGG: fbc:FB2170_16796 acetyl-CoA carboxylase, carboxyl transferase subunit beta; PFAM: Carboxyl transferase; PRIAM: Acetyl-CoA carboxylase; SPTR: Acetyl-CoA carboxylase, carboxyl transferase subunit beta; TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta 2245314 11054873 Murru_2039 Muricauda ruestringensis DSM 13258 acetyl-coenzyme A carboxylase carboxyl transferase subunit beta YP_004788500.1 2244454 R 886377 CDS YP_004788501.1 344203358 11054874 complement(2245342..2246409) 1 NC_015945.1 PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, yeast/E. coli subtype; COGs: COG0191 Fructose/tagatose bisphosphate aldolase; InterPro IPR006411:IPR000771; KEGG: fbc:FB2170_16791 fructose-bisphosphate aldolase; PFAM: Ketose-bisphosphate aldolase, class-II; PRIAM: Fructose-bisphosphate aldolase; SPTR: Fructose-bisphosphate aldolase; TIGRFAM: Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype; Ketose-bisphosphate aldolase, class-II; fructose-bisphosphate aldolase 2246409 11054874 Murru_2040 Muricauda ruestringensis DSM 13258 fructose-bisphosphate aldolase YP_004788501.1 2245342 R 886377 CDS YP_004788502.1 344203359 11054875 complement(2246462..2249050) 1 NC_015945.1 PFAM: Surface antigen; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: rbi:RB2501_02705 hypothetical protein; PFAM: Bacterial surface antigen (D15); SPTR: Putative uncharacterized protein; surface antigen (D15) 2249050 11054875 Murru_2041 Muricauda ruestringensis DSM 13258 surface antigen (D15) YP_004788502.1 2246462 R 886377 CDS YP_004788503.1 344203360 11054876 2249075..2249791 1 NC_015945.1 PFAM: SpoU rRNA Methylase family; COGs: COG0566 rRNA methylase; InterPro IPR013123:IPR001537; KEGG: fbc:FB2170_16781 putative tRNA/rRNA methyltransferase; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SPTR: Putative tRNA/rRNA methyltransferase; tRNA/rRNA methyltransferase SpoU 2249791 11054876 Murru_2042 Muricauda ruestringensis DSM 13258 tRNA/rRNA methyltransferase SpoU YP_004788503.1 2249075 D 886377 CDS YP_004788504.1 344203361 11054877 complement(2250112..2250804) 1 NC_015945.1 KEGG: rbi:RB2501_02695 PorT protein; SPTR: PorT protein; PorT protein 2250804 11054877 Murru_2043 Muricauda ruestringensis DSM 13258 PorT protein YP_004788504.1 2250112 R 886377 CDS YP_004788505.1 344203362 11054878 complement(2250809..2251537) 1 NC_015945.1 PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; HAMAP: UbiE/COQ5 methyltransferase; InterPro IPR004033; KEGG: fbc:FB2170_16771 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; SPTR: Menaquinone biosynthesis methyltransferase ubiE; TIGRFAM: UbiE/COQ5 methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase ubiE 2251537 11054878 Murru_2044 Muricauda ruestringensis DSM 13258 ubiquinone/menaquinone biosynthesis methyltransferase ubiE YP_004788505.1 2250809 R 886377 CDS YP_004788506.1 344203363 11054879 2251732..2253081 1 NC_015945.1 PFAM: TrkA-N domain; TrkA-C domain; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148:IPR006037; KEGG: rbi:RB2501_02685 potassium transporter peripheral membrane component; PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; SPTR: Putative potassium uptake protein; TrkA-N domain-containing protein 2253081 11054879 Murru_2045 Muricauda ruestringensis DSM 13258 TrkA-N domain-containing protein YP_004788506.1 2251732 D 886377 CDS YP_004788507.1 344203364 11054880 2253081..2254571 1 NC_015945.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445; KEGG: rbi:RB2501_02680 trk system K+ uptake protein TrkH; PFAM: Cation transporter; SPTR: Trk system K+ uptake protein TrkH; cation transporter 2254571 11054880 Murru_2046 Muricauda ruestringensis DSM 13258 cation transporter YP_004788507.1 2253081 D 886377 CDS YP_004788508.1 344203365 11054881 complement(2254662..2255849) 1 NC_015945.1 PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: rbi:RB2501_02675 putative aspartate aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: Aspartate transaminase; SPTR: Putative aspartate aminotransferase; aspartate transaminase 2255849 11054881 Murru_2047 Muricauda ruestringensis DSM 13258 aspartate transaminase YP_004788508.1 2254662 R 886377 CDS YP_004788509.1 344203366 11054882 complement(2255863..2256966) 1 NC_015945.1 PFAM: Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: fbc:FB2170_16751 linoleoyl-CoA desaturase; PFAM: Fatty acid desaturase, type 1; PRIAM: Linoleoyl-CoA desaturase; SPTR: Linoleoyl-CoA desaturase; Linoleoyl-CoA desaturase 2256966 11054882 Murru_2048 Muricauda ruestringensis DSM 13258 Linoleoyl-CoA desaturase YP_004788509.1 2255863 R 886377 CDS YP_004788510.1 344203367 11054883 2257080..2257718 1 NC_015945.1 PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB; COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division; HAMAP: rRNA small subunit methyltransferase G; InterPro IPR003682; KEGG: fbc:FB2170_16746 glucose-inhibited division protein B; PFAM: rRNA small subunit methyltransferase G; SPTR: Ribosomal RNA small subunit methyltransferase G; TIGRFAM: rRNA small subunit methyltransferase G; ribosomal RNA small subunit methyltransferase G 2257718 11054883 Murru_2049 Muricauda ruestringensis DSM 13258 ribosomal RNA small subunit methyltransferase G YP_004788510.1 2257080 D 886377 CDS YP_004788511.1 344203368 11054884 complement(2257730..2259979) 1 NC_015945.1 PFAM: Myotubularin protein; InterPro IPR001440:IPR019734; KEGG: ptm:GSPATT00030916001 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: Chromosome undetermined scaffold_119, whole genome shotgun sequence; hypothetical protein 2259979 11054884 Murru_2050 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788511.1 2257730 R 886377 CDS YP_004788512.1 344203369 11054885 complement(2260188..2260310) 1 NC_015945.1 hypothetical protein 2260310 11054885 Murru_2051 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788512.1 2260188 R 886377 CDS YP_004788513.1 344203370 11054886 complement(2260459..2261223) 1 NC_015945.1 PFAM: Creatinine amidohydrolase; COGs: COG1402 Uncharacterized protein putative amidase; InterPro IPR003785; KEGG: fbc:FB2170_16431 hypothetical protein; PFAM: Creatininase; SPTR: Putative uncharacterized protein; creatininase 2261223 11054886 Murru_2052 Muricauda ruestringensis DSM 13258 creatininase YP_004788513.1 2260459 R 886377 CDS YP_004788514.1 344203371 11054887 complement(2261298..2262926) 1 NC_015945.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 1; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR005931:IPR015590; KEGG: fbc:FB2170_16741 delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde dehydrogenase domain; PRIAM: 1-pyrroline-5-carboxylate dehydrogenase; SPTR: Delta-1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 1; delta-1-pyrroline-5-carboxylate dehydrogenase 2262926 11054887 Murru_2053 Muricauda ruestringensis DSM 13258 delta-1-pyrroline-5-carboxylate dehydrogenase YP_004788514.1 2261298 R 886377 CDS YP_004788515.1 344203372 11054888 complement(2262999..2263385) 1 NC_015945.1 PFAM: Protein of unknown function (DUF525); COGs: COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport; InterPro IPR007474; KEGG: rbi:RB2501_02645 ApaG; PFAM: ApaG domain; SPTR: Putative uncharacterized protein; ApaG domain-containing protein 2263385 11054888 Murru_2054 Muricauda ruestringensis DSM 13258 ApaG domain-containing protein YP_004788515.1 2262999 R 886377 CDS YP_004788516.1 344203373 11054889 complement(2263391..2264590) 1 NC_015945.1 PFAM: Protein of unknown function (DUF3667); KEGG: fbc:FB2170_16731 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2264590 11054889 Murru_2055 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788516.1 2263391 R 886377 CDS YP_004788517.1 344203374 11054890 complement(2264622..2265866) 1 NC_015945.1 KEGG: fbc:FB2170_16726 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2265866 11054890 Murru_2056 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788517.1 2264622 R 886377 CDS YP_004788518.1 344203375 11054891 2266018..2267370 1 NC_015945.1 PFAM: Na(+)-translocating NADH-quinone reductase subunit A (NQRA); NQRA C-terminal domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit; COGs: COG1726 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrA; InterPro IPR008703; KEGG: fbc:FB2170_16721 Na(+)-translocating NADH-quinone reductase subunit A; PFAM: NADH-quinone reductase, Na(+)-translocating, subunit A; SPTR: Na(+)-translocating NADH-quinone reductase subunit A; TIGRFAM: NADH-quinone reductase, Na(+)-translocating, subunit A; NADH:ubiquinone oxidoreductase subunit A 2267370 11054891 Murru_2057 Muricauda ruestringensis DSM 13258 NADH:ubiquinone oxidoreductase subunit A YP_004788518.1 2266018 D 886377 CDS YP_004788519.1 344203376 11054892 2267378..2268622 1 NC_015945.1 PFAM: NQR2, RnfD, RnfE family; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; COGs: COG1805 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrB; InterPro IPR010966:IPR004338; KEGG: fbc:FB2170_16716 Na(+)-translocating NADH-quinone reductase subunit B; PFAM: NADH-quinone reductase NQR2/RnfD; SPTR: Na(+)-translocating NADH-quinone reductase subunit B; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; NADH:ubiquinone oxidoreductase subunit B 2268622 11054892 Murru_2058 Muricauda ruestringensis DSM 13258 NADH:ubiquinone oxidoreductase subunit B YP_004788519.1 2267378 D 886377 CDS YP_004788520.1 344203377 11054893 2268625..2269374 1 NC_015945.1 PFAM: FMN-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; COGs: COG2869 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrC; InterPro IPR010204:IPR007329; KEGG: rbi:RB2501_02620 Na(+)-translocating NADH-quinone reductase subunit C; PFAM: FMN-binding; SMART: FMN-binding; SPTR: Na(+)-translocating NADH-quinone reductase subunit C; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; NADH:ubiquinone oxidoreductase subunit C 2269374 11054893 Murru_2059 Muricauda ruestringensis DSM 13258 NADH:ubiquinone oxidoreductase subunit C YP_004788520.1 2268625 D 886377 CDS YP_004788521.1 344203378 11054894 2269376..2270023 1 NC_015945.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; COGs: COG1347 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrD; InterPro IPR011292:IPR003667; KEGG: rbi:RB2501_02615 Na(+)-translocating NADH-quinone reductase subunit D; PFAM: Electron transport complex, Rnf/Nqr; SPTR: NADH-ubiquinone oxidoreductase; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; NADH:ubiquinone oxidoreductase subunit D 2270023 11054894 Murru_2060 Muricauda ruestringensis DSM 13258 NADH:ubiquinone oxidoreductase subunit D YP_004788521.1 2269376 D 886377 CDS YP_004788522.1 344203379 11054895 2270035..2270784 1 NC_015945.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; COGs: COG2209 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrE; InterPro IPR010967:IPR003667; KEGG: fbc:FB2170_16701 NADH:ubiquinone oxidoreductase, Na translocating, E subunit; PFAM: Electron transport complex, Rnf/Nqr; SPTR: NADH:ubiquinone oxidoreductase, Na translocating, E subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; NADH:ubiquinone oxidoreductase subunit E 2270784 11054895 Murru_2061 Muricauda ruestringensis DSM 13258 NADH:ubiquinone oxidoreductase subunit E YP_004788522.1 2270035 D 886377 CDS YP_004788523.1 344203380 11054896 2270788..2272098 1 NC_015945.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit; COGs: COG2871 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrF; InterPro IPR010205:IPR001041:IPR008333:IPR001433; KEGG: fbc:FB2170_16696 Na(+)-translocating NADH-quinone reductase subunit F; PFAM: Oxidoreductase FAD/NAD(P)-binding; Ferredoxin; Oxidoreductase, FAD-binding domain; PRIAM: Ferredoxin--NAD(+) reductase; SPTR: Na(+)-translocating NADH-quinone reductase subunit F; TIGRFAM: NADH-quinone reductase, Na(+)-translocating, F subunit; NADH:ubiquinone oxidoreductase subunit F 2272098 11054896 Murru_2062 Muricauda ruestringensis DSM 13258 NADH:ubiquinone oxidoreductase subunit F YP_004788523.1 2270788 D 886377 CDS YP_004788524.1 344203381 11054897 2272186..2272545 1 NC_015945.1 KEGG: rbi:RB2501_02600 Na(+)-translocating NADH-quinone reductase subunit F; SPTR: Na(+)-translocating NADH-quinone reductase subunit F; Na(+)-translocating NADH-quinone reductase subunit F 2272545 11054897 Murru_2063 Muricauda ruestringensis DSM 13258 Na(+)-translocating NADH-quinone reductase subunit F YP_004788524.1 2272186 D 886377 CDS YP_004788525.1 344203382 11054898 2272546..2273742 1 NC_015945.1 PFAM: ApbE family; COGs: COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; InterPro IPR003374; KEGG: fbc:FB2170_16686 thiamine biosynthesis lipoprotein ApbE; PFAM: Thiamine synthesis ApbE/UPF0280; SPTR: Thiamine biosynthesis lipoprotein ApbE; ApbE family lipoprotein 2273742 11054898 Murru_2064 Muricauda ruestringensis DSM 13258 ApbE family lipoprotein YP_004788525.1 2272546 D 886377 CDS YP_004788526.1 344203383 11054899 complement(2273937..2274824) 1 NC_015945.1 PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: fjo:Fjoh_1761 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: SAM-dependent methyltransferase; type 11 methyltransferase 2274824 11054899 Murru_2065 Muricauda ruestringensis DSM 13258 type 11 methyltransferase YP_004788526.1 2273937 R 886377 CDS YP_004788527.1 344203384 11054900 complement(2274896..2275714) 1 NC_015945.1 PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I; COGs: COG0024 Methionine aminopeptidase; InterPro IPR002467:IPR000994; KEGG: fbc:FB2170_16676 methionine aminopeptidase, type I; PFAM: Peptidase M24, structural domain; PRIAM: Methionyl aminopeptidase; SPTR: Methionine aminopeptidase; TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; methionine aminopeptidase 2275714 11054900 Murru_2066 Muricauda ruestringensis DSM 13258 methionine aminopeptidase YP_004788527.1 2274896 R 886377 CDS YP_004788528.1 344203385 11054901 complement(2275923..2277440) 1 NC_015945.1 PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; COGs: COG0696 Phosphoglyceromutase; HAMAP: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; InterPro IPR005995:IPR011258:IPR006124; KEGG: rbi:RB2501_02575 phosphoglyceromutase; PFAM: BPG-independent PGAM, N-terminal; Metalloenzyme; PRIAM: Phosphoglycerate mutase; SPTR: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2277440 11054901 Murru_2067 Muricauda ruestringensis DSM 13258 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_004788528.1 2275923 R 886377 CDS YP_004788529.1 344203386 11054902 2277649..2278041 1 NC_015945.1 PFAM: Ankyrin repeat; InterPro IPR002110; KEGG: fbc:FB2170_16666 ankyrin; SPTR: Ankyrin; ankyrin repeat-containing protein 2278041 11054902 Murru_2068 Muricauda ruestringensis DSM 13258 ankyrin repeat-containing protein YP_004788529.1 2277649 D 886377 CDS YP_004788530.1 344203387 11054903 complement(2278145..2278312) 1 NC_015945.1 KEGG: fbc:FB2170_16661 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2278312 11054903 Murru_2069 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788530.1 2278145 R 886377 CDS YP_004788531.1 344203388 11054904 complement(2278433..2279203) 1 NC_015945.1 PFAM: Peptidase family M48; COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR001915; KEGG: fbc:FB2170_16656 hypothetical protein; PFAM: Peptidase M48; SPTR: Putative uncharacterized protein; peptidase M48 Ste24p 2279203 11054904 Murru_2070 Muricauda ruestringensis DSM 13258 peptidase M48 Ste24p YP_004788531.1 2278433 R 886377 CDS YP_004788532.1 344203389 11054905 complement(2279243..2279974) 1 NC_015945.1 PFAM: D-alanyl-D-alanine carboxypeptidase; COGs: COG1876 D-alanyl-D-alanine carboxypeptidase; InterPro IPR003709; KEGG: fbc:FB2170_16651 D-alanyl-D-alanine carboxypeptidase family protein; PFAM: Peptidase M15B/M15C, D,D-carboxypeptidase VanY/endolysins; SPTR: D-alanyl-D-alanine carboxypeptidase family protein; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin 2279974 11054905 Murru_2071 Muricauda ruestringensis DSM 13258 peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin YP_004788532.1 2279243 R 886377 CDS YP_004788533.1 344203390 11054906 complement(2280473..2281639) 1 NC_015945.1 KEGG: fbc:FB2170_16621 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2281639 11054906 Murru_2072 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788533.1 2280473 R 886377 CDS YP_004788534.1 344203391 11054907 complement(2281639..2283369) 1 NC_015945.1 KEGG: rbi:RB2501_02535 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2283369 11054907 Murru_2073 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788534.1 2281639 R 886377 CDS YP_004788535.1 344203392 11054908 2283594..2284334 1 NC_015945.1 KEGG: fbc:FB2170_16611 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2284334 11054908 Murru_2074 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788535.1 2283594 D 886377 CDS YP_004788536.1 344203393 11054909 2284331..2285125 1 NC_015945.1 KEGG: fbc:FB2170_16606 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2285125 11054909 Murru_2075 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788536.1 2284331 D 886377 CDS YP_004788537.1 344203394 11054910 2285559..2286077 1 NC_015945.1 KEGG: fbc:FB2170_16596 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2286077 11054910 Murru_2076 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788537.1 2285559 D 886377 CDS YP_004788538.1 344203395 11054911 2286138..2288456 1 NC_015945.1 COGs: COG0308 Aminopeptidase N; KEGG: rbi:RB2501_02515 Zn-dependent aminopeptidase; SPTR: Zn-dependent aminopeptidase; Zn-dependent aminopeptidase 2288456 11054911 Murru_2077 Muricauda ruestringensis DSM 13258 Zn-dependent aminopeptidase YP_004788538.1 2286138 D 886377 CDS YP_004788539.1 344203396 11054912 2288467..2288811 1 NC_015945.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; InterPro IPR003369; KEGG: rbi:RB2501_02510 hypothetical protein; PFAM: Bacterial sec-independent translocation protein MttA/Hcf106; SPTR: Putative uncharacterized protein; sec-independent translocation protein mttA/Hcf106 2288811 11054912 Murru_2078 Muricauda ruestringensis DSM 13258 sec-independent translocation protein mttA/Hcf106 YP_004788539.1 2288467 D 886377 CDS YP_004788540.1 344203397 11054913 2288818..2289390 1 NC_015945.1 PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: fbc:FB2170_16581 PAP2 superfamily protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: PAP2 superfamily protein; phosphoesterase PA-phosphatase-like protein 2289390 11054913 Murru_2079 Muricauda ruestringensis DSM 13258 phosphoesterase PA-phosphatase-like protein YP_004788540.1 2288818 D 886377 CDS YP_004788541.1 344203398 11054914 complement(2289356..2289997) 1 NC_015945.1 PFAM: O-methyltransferase; COGs: COG4122 O-methyltransferase; InterPro IPR002935; KEGG: fbc:FB2170_16576 O-methyltransferase family protein; PFAM: O-methyltransferase, family 3; PRIAM: Caffeoyl-CoA O-methyltransferase; SPTR: O-methyltransferase family protein; caffeoyl-CoA O-methyltransferase 2289997 11054914 Murru_2080 Muricauda ruestringensis DSM 13258 caffeoyl-CoA O-methyltransferase YP_004788541.1 2289356 R 886377 CDS YP_004788542.1 344203399 11054915 2290225..2290689 1 NC_015945.1 PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: fbc:FB2170_16571 putative acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Predicted acetyltransferase; N-acetyltransferase GCN5 2290689 11054915 Murru_2081 Muricauda ruestringensis DSM 13258 N-acetyltransferase GCN5 YP_004788542.1 2290225 D 886377 CDS YP_004788543.1 344203400 11054916 2291068..2292336 1 NC_015945.1 PFAM: Aminotransferase class-V; TIGRFAM: kynureninase; COGs: COG3844 Kynureninase; InterPro IPR010111; KEGG: fbc:FB2170_16566 kynureninase; PRIAM: Kynureninase; SPTR: Kynureninase; TIGRFAM: Kynureninase; kynureninase 2292336 11054916 Murru_2082 Muricauda ruestringensis DSM 13258 kynureninase YP_004788543.1 2291068 D 886377 CDS YP_004788544.1 344203401 11054917 2292378..2293526 1 NC_015945.1 PFAM: Major Facilitator Superfamily; COGs: COG0738 Fucose permease; InterPro IPR011701; KEGG: fbc:FB2170_16556 putative transport protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Putative transport protein; major facilitator superfamily protein 2293526 11054917 Murru_2083 Muricauda ruestringensis DSM 13258 major facilitator superfamily protein YP_004788544.1 2292378 D 886377 CDS YP_004788545.1 344203402 11054918 complement(2293597..2294043) 1 NC_015945.1 KEGG: zpr:ZPR_4594 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2294043 11054918 Murru_2084 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788545.1 2293597 R 886377 CDS YP_004788546.1 344203403 11054919 complement(2294219..2294899) 1 NC_015945.1 KEGG: fbc:FB2170_16551 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2294899 11054919 Murru_2085 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788546.1 2294219 R 886377 CDS YP_004788547.1 344203404 11054920 2294986..2295615 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: sli:Slin_4745 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: ECF sigma factor SigX; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 2295615 11054920 Murru_2086 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004788547.1 2294986 D 886377 CDS YP_004788548.1 344203405 11054921 2295616..2295807 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 2295807 11054921 Murru_2087 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788548.1 2295616 D 886377 CDS YP_004788549.1 344203406 11054922 2295834..2296661 1 NC_015945.1 PFAM: Mechanosensitive ion channel; Conserved TM helix; InterPro IPR008910; KEGG: sli:Slin_4747 TM helix repeat-containing protein; PFAM: Conserved TM helix; SPTR: Putative cytoplasmic membrane protein; TM helix repeat-containing protein 2296661 11054922 Murru_2088 Muricauda ruestringensis DSM 13258 TM helix repeat-containing protein YP_004788549.1 2295834 D 886377 CDS YP_004788550.1 344203407 11054923 2296738..2297286 1 NC_015945.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; COGs: COG0740 Protease subunit of ATP-dependent Clp protease; HAMAP: Peptidase S14, ClpP; InterPro IPR001907; KEGG: fbc:FB2170_16546 protease subunit of ATP-dependent Clp protease; PFAM: Peptidase S14, ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit 2; ATP-dependent Clp protease proteolytic subunit 2297286 11054923 Murru_2089 Muricauda ruestringensis DSM 13258 ATP-dependent Clp protease proteolytic subunit YP_004788550.1 2296738 D 886377 CDS YP_004788551.1 344203408 11054924 2297563..2298921 1 NC_015945.1 PFAM: FAD binding domain; COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR006076; KEGG: fbc:FB2170_16541 monooxygenase family protein; PFAM: FAD dependent oxidoreductase; PRIAM: Kynurenine 3-monooxygenase; SPTR: Monooxygenase family protein; kynurenine 3-monooxygenase 2298921 11054924 Murru_2090 Muricauda ruestringensis DSM 13258 kynurenine 3-monooxygenase YP_004788551.1 2297563 D 886377 CDS YP_004788552.1 344203409 11054925 complement(2299562..2300341) 1 NC_015945.1 PFAM: Putative zinc ribbon domain; COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: fbc:FB2170_16536 hypothetical protein; PFAM: Protein of unknown function DUF164; SPTR: Putative uncharacterized protein; hypothetical protein 2300341 11054925 Murru_2091 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788552.1 2299562 R 886377 CDS YP_004788553.1 344203410 11054926 complement(2300347..2301441) 1 NC_015945.1 PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family; COGs: COG0327 conserved hypothetical protein; InterPro IPR002678; KEGG: fbc:FB2170_16531 hypothetical protein; PFAM: NGG1p interacting factor 3, NIF3; SPTR: Putative uncharacterized protein; TIGRFAM: NGG1p interacting factor 3, NIF3; NGG1p interacting factor 3 protein, NIF3 2301441 11054926 Murru_2092 Muricauda ruestringensis DSM 13258 NGG1p interacting factor 3 protein, NIF3 YP_004788553.1 2300347 R 886377 CDS YP_004788554.1 344203411 11054927 2301490..2302488 1 NC_015945.1 PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; COGs: COG1663 Tetraacyldisaccharide-1-P 4'-kinase; HAMAP: Tetraacyldisaccharide 4'-kinase; InterPro IPR003758; KEGG: fbc:FB2170_16526 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide 4'-kinase; PRIAM: Tetraacyldisaccharide 4'-kinase; SPTR: Tetraacyldisaccharide 4'-kinase; TIGRFAM: Tetraacyldisaccharide 4'-kinase; tetraacyldisaccharide 4'-kinase 2302488 11054927 Murru_2093 Muricauda ruestringensis DSM 13258 tetraacyldisaccharide 4'-kinase YP_004788554.1 2301490 D 886377 CDS YP_004788555.1 344203412 11054928 complement(2302648..2304870) 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR001789; KEGG: fbc:FB2170_16521 multi-sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Multi-sensor hybrid histidine kinase; histidine kinase 2304870 11054928 Murru_2094 Muricauda ruestringensis DSM 13258 histidine kinase YP_004788555.1 2302648 R 886377 CDS YP_004788556.1 344203413 11054929 complement(2304867..2305877) 1 NC_015945.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR006424:IPR020828:IPR020829; KEGG: fbc:FB2170_16516 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; SPTR: Glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase 2305877 11054929 Murru_2095 Muricauda ruestringensis DSM 13258 glyceraldehyde-3-phosphate dehydrogenase YP_004788556.1 2304867 R 886377 CDS YP_004788557.1 344203414 11054930 complement(2305895..2306770) 1 NC_015945.1 PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase; COGs: COG0320 Lipoate synthase; HAMAP: Lipoate synthase; InterPro IPR003698:IPR007197:IPR006638; KEGG: fbc:FB2170_16511 lipoyl synthase; PFAM: Radical SAM; PRIAM: Lipoyl synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Lipoyl synthase; TIGRFAM: Lipoate synthase; lipoyl synthase 2306770 11054930 Murru_2096 Muricauda ruestringensis DSM 13258 lipoyl synthase YP_004788557.1 2305895 R 886377 CDS YP_004788558.1 344203415 11054931 complement(2306834..2307394) 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: fbc:FB2170_16506 RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 2307394 11054931 Murru_2097 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004788558.1 2306834 R 886377 CDS YP_004788559.1 344203416 11054932 complement(2307425..2307634) 1 NC_015945.1 KEGG: fbc:FB2170_16501 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2307634 11054932 Murru_2098 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788559.1 2307425 R 886377 CDS YP_004788560.1 344203417 11054933 complement(2307711..2308469) 1 NC_015945.1 PFAM: Anti-sigma-K factor rskA; KEGG: fbc:FB2170_16496 RNA polymerase sigma-70 factor; SPTR: RNA polymerase sigma-70 factor; RNA polymerase sigma-70 factor 2308469 11054933 Murru_2099 Muricauda ruestringensis DSM 13258 RNA polymerase sigma-70 factor YP_004788560.1 2307711 R 886377 CDS YP_004788561.1 344203418 11054934 complement(2308466..2309032) 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: fbc:FB2170_16491 RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 2309032 11054934 Murru_2100 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004788561.1 2308466 R 886377 CDS YP_004788562.1 344203419 11054935 complement(2309236..2310252) 1 NC_015945.1 PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; COGs: COG0812 UDP-N-acetylmuramate dehydrogenase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; InterPro IPR003170:IPR006094:IPR011601; KEGG: fbc:FB2170_16481 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; PRIAM: UDP-N-acetylmuramate dehydrogenase; SPTR: UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase 2310252 11054935 Murru_2101 Muricauda ruestringensis DSM 13258 UDP-N-acetylenolpyruvoylglucosamine reductase YP_004788562.1 2309236 R 886377 CDS YP_004788563.1 344203420 11054936 complement(2310252..2311442) 1 NC_015945.1 PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: fbc:FB2170_16476 aspartate aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: Aspartate transaminase; SPTR: Aspartate aminotransferase; aspartate transaminase 2311442 11054936 Murru_2102 Muricauda ruestringensis DSM 13258 aspartate transaminase YP_004788563.1 2310252 R 886377 CDS YP_004788564.1 344203421 11054937 2311590..2312933 1 NC_015945.1 PFAM: PDZ domain (Also known as DHR or GLGF); InterPro IPR001478; KEGG: fbc:FB2170_16471 aspartate aminotransferase; PFAM: PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: Aspartate aminotransferase; PDZ/DHR/GLGF domain-containing protein 2312933 11054937 Murru_2103 Muricauda ruestringensis DSM 13258 PDZ/DHR/GLGF domain-containing protein YP_004788564.1 2311590 D 886377 CDS YP_004788565.1 344203422 11054938 complement(2312997..2313383) 1 NC_015945.1 PFAM: Protein of unknown function (DUF1573); InterPro IPR011467; KEGG: rbi:RB2501_02385 hypothetical protein; PFAM: Protein of unknown function DUF1573; SPTR: Putative uncharacterized protein; hypothetical protein 2313383 11054938 Murru_2104 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788565.1 2312997 R 886377 CDS YP_004788566.1 344203423 11054939 2313582..2316212 1 NC_015945.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; COGs: COG0525 Valyl-tRNA synthetase; HAMAP: Valyl-tRNA synthetase; InterPro IPR002303:IPR002300:IPR013155:IPR019499; KEGG: fbc:FB2170_16461 putative valyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA-binding arm; PRIAM: Valine--tRNA ligase; SPTR: Putative valyl-tRNA synthetase; TIGRFAM: Valyl-tRNA synthetase; valyl-tRNA synthetase 2316212 11054939 Murru_2105 Muricauda ruestringensis DSM 13258 valyl-tRNA synthetase YP_004788566.1 2313582 D 886377 CDS YP_004788567.1 344203424 11054940 2316232..2316333 1 NC_015945.1 hypothetical protein 2316333 11054940 Murru_2106 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788567.1 2316232 D 886377 CDS YP_004788568.1 344203425 11054941 2316317..2317705 1 NC_015945.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: fbc:FB2170_09301 Gfo/Idh/MocA family oxidoreductase; PFAM: Oxidoreductase, N-terminal; PRIAM: Alpha-N-acetylgalactosaminidase; SPTR: Oxidoreductase, Gfo/Idh/MocA family protein; Alpha-N-acetylgalactosaminidase 2317705 11054941 Murru_2107 Muricauda ruestringensis DSM 13258 Alpha-N-acetylgalactosaminidase YP_004788568.1 2316317 D 886377 CDS YP_004788569.1 344203426 11054942 2317720..2318772 1 NC_015945.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; COGs: COG0153 Galactokinase; InterPro IPR006204:IPR013750; KEGG: lby:Lbys_2575 galactokinase; PFAM: GHMP kinase; GHMP kinase, C-terminal; PRIAM: Galactokinase; SPTR: GHMP kinase; galactokinase 2318772 11054942 Murru_2108 Muricauda ruestringensis DSM 13258 galactokinase YP_004788569.1 2317720 D 886377 CDS YP_004788570.1 344203427 11054943 2318772..2319611 1 NC_015945.1 PFAM: Nucleotidyl transferase; KEGG: bfa:Bfae_28250 dTDP-glucose pyrophosphorylase; SPTR: Glucose-1-phosphate thymidylyltransferase; dTDP-glucose pyrophosphorylase 2319611 11054943 Murru_2109 Muricauda ruestringensis DSM 13258 dTDP-glucose pyrophosphorylase YP_004788570.1 2318772 D 886377 CDS YP_004788571.1 344203428 11054944 2319664..2320932 1 NC_015945.1 PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: fbc:FB2170_16436 hypothetical protein; PFAM: Fatty acid hydroxylase; SPTR: Putative uncharacterized protein; fatty acid hydroxylase 2320932 11054944 Murru_2110 Muricauda ruestringensis DSM 13258 fatty acid hydroxylase YP_004788571.1 2319664 D 886377 CDS YP_004788572.1 344203429 11054945 complement(2320929..2321192) 1 NC_015945.1 PFAM: Acyl CoA binding protein; KEGG: fbc:FB2170_16426 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2321192 11054945 Murru_2111 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788572.1 2320929 R 886377 CDS YP_004788573.1 344203430 11054946 complement(2321185..2321850) 1 NC_015945.1 PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor-related protein; COGs: COG0688 Phosphatidylserine decarboxylase; HAMAP: Phosphatidylserine decarboxylase-related protein; InterPro IPR004428:IPR003817; KEGG: fbc:FB2170_16421 phosphatidylserine decarboxylase; PFAM: Phosphatidylserine decarboxylase-related; PRIAM: Phosphatidylserine decarboxylase; SPTR: Phosphatidylserine decarboxylase proenzyme; TIGRFAM: Phosphatidylserine decarboxylase-related protein; phosphatidylserine decarboxylase 2321850 11054946 Murru_2112 Muricauda ruestringensis DSM 13258 phosphatidylserine decarboxylase YP_004788573.1 2321185 R 886377 CDS YP_004788574.1 344203431 11054947 complement(2321840..2322643) 1 NC_015945.1 PFAM: Cytidylyltransferase family; COGs: COG0575 CDP-diglyceride synthetase; InterPro IPR000374; KEGG: fbc:FB2170_16416 phosphatidate cytidylyltransferase; PFAM: Phosphatidate cytidylyltransferase; SPTR: Phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase 2322643 11054947 Murru_2113 Muricauda ruestringensis DSM 13258 phosphatidate cytidylyltransferase YP_004788574.1 2321840 R 886377 CDS YP_004788575.1 344203432 11054948 complement(2322648..2323256) 1 NC_015945.1 PFAM: Uncharacterised ACR, YkgG family COG1556; InterPro IPR003741; KEGG: fbc:FB2170_16411 hypothetical protein; PFAM: Domain of unknown function DUF162; SPTR: Putative uncharacterized protein; lactate utilization protein B/C 2323256 11054948 Murru_2114 Muricauda ruestringensis DSM 13258 lactate utilization protein B/C YP_004788575.1 2322648 R 886377 CDS YP_004788576.1 344203433 11054949 complement(2323324..2325276) 1 NC_015945.1 PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; COGs: COG0465 ATP-dependent Zn protease; InterProIPR005936:IPR011546:IPR003959:IPR000642:IPR 003593; KEGG: fbc:FB2170_16406 putative transmembrane AAA-metalloprotease FtsH; PFAM: ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; Peptidase M41; PRIAM: Microtubule-severing ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative transmembrane AAA-metalloprotease FtsH; TIGRFAM: Peptidase M41, FtsH; ATP-dependent metalloprotease FtsH 2325276 11054949 Murru_2115 Muricauda ruestringensis DSM 13258 ATP-dependent metalloprotease FtsH YP_004788576.1 2323324 R 886377 CDS YP_004788577.1 344203434 11054950 complement(2325283..2325660) 1 NC_015945.1 PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein; COGs: COG0799 Iojap protein; InterPro IPR004394; KEGG: rbi:RB2501_02315 hypothetical protein; PFAM: Ribosome-associated, Iojap-like; SPTR: Putative uncharacterized protein; TIGRFAM: Ribosome-associated, Iojap-like; iojap family protein 2325660 11054950 Murru_2116 Muricauda ruestringensis DSM 13258 iojap family protein YP_004788577.1 2325283 R 886377 CDS YP_004788578.1 344203435 11054951 2325743..2326486 1 NC_015945.1 PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR004408:IPR004143; KEGG: fbc:FB2170_16396 putative biotin--(acetyl-CoA carboxylase) synthetase; PFAM: Biotin/lipoate A/B protein ligase; SPTR: Putative biotin--(Acetyl-CoA carboxylase) synthetase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; biotin--acetyl-CoA-carboxylase ligase 2326486 11054951 Murru_2117 Muricauda ruestringensis DSM 13258 biotin--acetyl-CoA-carboxylase ligase YP_004788578.1 2325743 D 886377 CDS YP_004788579.1 344203436 11054952 complement(2326480..2326878) 1 NC_015945.1 KEGG: fbc:FB2170_16391 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2326878 11054952 Murru_2118 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788579.1 2326480 R 886377 CDS YP_004788580.1 344203437 11054953 complement(2326888..2327526) 1 NC_015945.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase; COGs: COG0461 Orotate phosphoribosyltransferase; InterPro IPR004467:IPR000836; KEGG: fbc:FB2170_16386 orotate phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; PRIAM: Orotate phosphoribosyltransferase; SPTR: Orotate phosphoribosyltransferase; TIGRFAM: Orotate phosphoribosyl transferase, clade 1; orotate phosphoribosyltransferase 2327526 11054953 Murru_2119 Muricauda ruestringensis DSM 13258 orotate phosphoribosyltransferase YP_004788580.1 2326888 R 886377 CDS YP_004788581.1 344203438 11054954 2327534..2328133 1 NC_015945.1 PFAM: NUDIX domain; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086; KEGG: fbc:FB2170_16381 orotate phosphoribosyltransferase; PFAM: NUDIX hydrolase domain; SPTR: Orotate phosphoribosyltransferase; NUDIX hydrolase 2328133 11054954 Murru_2120 Muricauda ruestringensis DSM 13258 NUDIX hydrolase YP_004788581.1 2327534 D 886377 CDS YP_004788582.1 344203439 11054955 complement(2328126..2329898) 1 NC_015945.1 PFAM: Zinc carboxypeptidase; InterPro IPR000834; KEGG: gfo:GFO_2688 M14 family peptidase; PFAM: Peptidase M14, carboxypeptidase A; SPTR: Peptidase, family M14; manually curated; peptidase M14 carboxypeptidase A 2329898 11054955 Murru_2121 Muricauda ruestringensis DSM 13258 peptidase M14 carboxypeptidase A YP_004788582.1 2328126 R 886377 CDS YP_004788583.1 344203440 11054956 complement(2329967..2330392) 1 NC_015945.1 PFAM: Response regulator receiver domain; InterPro IPR001789; KEGG: fbc:FB2170_16376 response regulator; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Response regulator; response regulator receiver 2330392 11054956 Murru_2122 Muricauda ruestringensis DSM 13258 response regulator receiver YP_004788583.1 2329967 R 886377 CDS YP_004788584.1 344203441 11054957 complement(2330367..2332193) 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR000014:IPR003594:IPR013655:IPR013656; KEGG: rbi:RB2501_02280 histidine kinase sensor protein; PFAM: ATPase-like, ATP-binding domain; PAS fold-4; PAS fold-3; SMART: ATPase-like, ATP-binding domain; PAS; SPTR: Histidine kinase sensor protein; TIGRFAM: PAS; PAS/PAC sensor signal transduction histidine kinase 2332193 11054957 Murru_2123 Muricauda ruestringensis DSM 13258 PAS/PAC sensor signal transduction histidine kinase YP_004788584.1 2330367 R 886377 CDS YP_004788585.1 344203442 11054958 complement(2332385..2332843) 1 NC_015945.1 PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain; COGs: COG0669 Phosphopantetheine adenylyltransferase; HAMAP: Coenzyme A biosynthesis protein; InterPro IPR004821:IPR001980:IPR004820; KEGG: fbc:FB2170_16366 phosphopantetheine adenylyltransferase; PFAM: Cytidylyltransferase; PRIAM: Pantetheine-phosphate adenylyltransferase; SPTR: Phosphopantetheine adenylyltransferase; TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; phosphopantetheine adenylyltransferase 2332843 11054958 Murru_2124 Muricauda ruestringensis DSM 13258 phosphopantetheine adenylyltransferase YP_004788585.1 2332385 R 886377 CDS YP_004788586.1 344203443 11054959 complement(2332877..2333851) 1 NC_015945.1 PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase; COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; HAMAP: D-alanine--D-alanine ligase; InterPro IPR005905:IPR011127:IPR011095; KEGG: fbc:FB2170_16361 D-alanylalanine synthetase; PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; PRIAM: D-alanine--D-alanine ligase; SPTR: D-alanine--D-alanine ligase; TIGRFAM: D-alanine--D-alanine ligase; D-alanine--D-alanine ligase 2333851 11054959 Murru_2125 Muricauda ruestringensis DSM 13258 D-alanine--D-alanine ligase YP_004788586.1 2332877 R 886377 CDS YP_004788587.1 344203444 11054960 2333931..2334518 1 NC_015945.1 PFAM: PASTA domain; COGs: COG2815 conserved hypothetical protein; InterPro IPR005543; KEGG: fbc:FB2170_16356 hypothetical protein; PFAM: PASTA; SMART: PASTA; SPTR: Putative uncharacterized protein; protein PASTA domain-containing protein 2334518 11054960 Murru_2126 Muricauda ruestringensis DSM 13258 protein PASTA domain-containing protein YP_004788587.1 2333931 D 886377 CDS YP_004788588.1 344203445 11054961 2334521..2335552 1 NC_015945.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR002942:IPR006225:IPR006145; KEGG: fbc:FB2170_16351 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; SMART: RNA-binding S4; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RluC/RluD; RluA family pseudouridine synthase 2335552 11054961 Murru_2127 Muricauda ruestringensis DSM 13258 RluA family pseudouridine synthase YP_004788588.1 2334521 D 886377 CDS YP_004788589.1 344203446 11054962 2335642..2336403 1 NC_015945.1 PFAM: Protein of unknown function (DUF328); COGs: COG3022 conserved hypothetical protein; HAMAP: Uncharacterised protein family UPF0246; InterPro IPR005583; KEGG: fbc:FB2170_16346 hypothetical protein; PFAM: Uncharacterised protein family UPF0246; SPTR: UPF0246 protein FB2170_16346; hypothetical protein 2336403 11054962 Murru_2128 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788589.1 2335642 D 886377 CDS YP_004788590.1 344203447 11054963 2336579..2339125 1 NC_015945.1 PFAM: Phosphoenolpyruvate carboxylase; COGs: COG2352 Phosphoenolpyruvate carboxylase; InterPro IPR021135; KEGG: fbc:FB2170_16331 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase; PRIAM: Phosphoenolpyruvate carboxylase; SPTR: Phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 2339125 11054963 Murru_2129 Muricauda ruestringensis DSM 13258 phosphoenolpyruvate carboxylase YP_004788590.1 2336579 D 886377 CDS YP_004788591.1 344203448 11054964 2339231..2339926 1 NC_015945.1 KEGG: fbc:FB2170_16336 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2339926 11054964 Murru_2130 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788591.1 2339231 D 886377 CDS YP_004788592.1 344203449 11054965 complement(2339923..2340780) 1 NC_015945.1 KEGG: ppn:Palpr_1021 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2340780 11054965 Murru_2131 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788592.1 2339923 R 886377 CDS YP_004788593.1 344203450 11054966 complement(2340796..2341146) 1 NC_015945.1 KEGG: zpr:ZPR_1349 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2341146 11054966 Murru_2132 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788593.1 2340796 R 886377 CDS YP_004788594.1 344203451 11054967 complement(2341177..2342703) 1 NC_015945.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650; KEGG: fbc:FB2170_16321 putative peptidase; PFAM: Peptidase M20, dimerisation; Peptidase M20; SPTR: Putative peptidase; peptidase dimerization domain-containing protein 2342703 11054967 Murru_2133 Muricauda ruestringensis DSM 13258 peptidase dimerization domain-containing protein YP_004788594.1 2341177 R 886377 CDS YP_004788595.1 344203452 11054968 complement(2342723..2343484) 1 NC_015945.1 PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; COGs: COG0159 Tryptophan synthase alpha chain; HAMAP: Tryptophan synthase, alpha chain; InterPro IPR002028; KEGG: fjo:Fjoh_4899 tryptophan synthase subunit alpha; PFAM: Tryptophan synthase, alpha chain; PRIAM: Tryptophan synthase; SPTR: Tryptophan synthase alpha chain; TIGRFAM: Tryptophan synthase, alpha chain; tryptophan synthase subunit alpha 2343484 11054968 Murru_2134 Muricauda ruestringensis DSM 13258 tryptophan synthase subunit alpha YP_004788595.1 2342723 R 886377 CDS YP_004788596.1 344203453 11054969 complement(2343692..2344876) 1 NC_015945.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; COGs: COG0133 Tryptophan synthase beta chain; HAMAP: Tryptophan synthase beta chain/beta chain-like; InterPro IPR006654:IPR023026:IPR001926; KEGG: fbc:FB2170_16306 tryptophan synthase subunit beta; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Tryptophan synthase; SPTR: Tryptophan synthase beta chain; TIGRFAM: Tryptophan synthase, beta chain; tryptophan synthase subunit beta 2344876 11054969 Murru_2135 Muricauda ruestringensis DSM 13258 tryptophan synthase subunit beta YP_004788596.1 2343692 R 886377 CDS YP_004788597.1 344203454 11054970 complement(2344889..2345590) 1 NC_015945.1 PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR001240; KEGG: fbc:FB2170_16301 putative N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); PRIAM: Phosphoribosylanthranilate isomerase; SPTR: N-(5'-phosphoribosyl)anthranilate isomerase; manually curated; phosphoribosylanthranilate isomerase 2345590 11054970 Murru_2136 Muricauda ruestringensis DSM 13258 phosphoribosylanthranilate isomerase YP_004788597.1 2344889 R 886377 CDS YP_004788598.1 344203455 11054971 complement(2345722..2346507) 1 NC_015945.1 PFAM: Indole-3-glycerol phosphate synthase; COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR013798; KEGG: zpr:ZPR_0832 indole-3-glycerolphosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; PRIAM: Indole-3-glycerol-phosphate synthase; SPTR: Indole-3-glycerol phosphate synthase; Indole-3-glycerol phosphate synthase 2346507 11054971 Murru_2137 Muricauda ruestringensis DSM 13258 Indole-3-glycerol phosphate synthase YP_004788598.1 2345722 R 886377 CDS YP_004788599.1 344203456 11054972 complement(2346635..2347630) 1 NC_015945.1 PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase; COGs: COG0547 Anthranilate phosphoribosyltransferase; HAMAP: Anthranilate phosphoribosyl transferase; InterPro IPR005940:IPR017459:IPR000312; KEGG: fbc:FB2170_16291 anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; PRIAM: Anthranilate phosphoribosyltransferase; SPTR: Anthranilate phosphoribosyltransferase; TIGRFAM: Anthranilate phosphoribosyl transferase; anthranilate phosphoribosyltransferase 2347630 11054972 Murru_2138 Muricauda ruestringensis DSM 13258 anthranilate phosphoribosyltransferase YP_004788599.1 2346635 R 886377 CDS YP_004788600.1 344203457 11054973 complement(2347765..2348331) 1 NC_015945.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterPro IPR006221:IPR000991; KEGG: fbc:FB2170_16286 anthranilate synthase component II; PFAM: Glutamine amidotransferase class-I, C-terminal; PRIAM: Anthranilate synthase; SPTR: Anthranilate synthase component II; TIGRFAM: Anthranilate synthase, glutamine amidotransferase domain; glutamine amidotransferase of anthranilate synthase 2348331 11054973 Murru_2139 Muricauda ruestringensis DSM 13258 glutamine amidotransferase of anthranilate synthase YP_004788600.1 2347765 R 886377 CDS YP_004788601.1 344203458 11054974 complement(2348334..2349752) 1 NC_015945.1 PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region; COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR006805:IPR015890; KEGG: fbc:FB2170_16281 anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; PRIAM: Anthranilate synthase; SPTR: Anthranilate synthase component I; anthranilate synthase 2349752 11054974 Murru_2140 Muricauda ruestringensis DSM 13258 anthranilate synthase YP_004788601.1 2348334 R 886377 CDS YP_004788602.1 344203459 11054975 complement(2349792..2350076) 1 NC_015945.1 PFAM: GIY-YIG catalytic domain; COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: hdn:Hden_0288 excinuclease ABC C subunit domain protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SMART: Excinuclease ABC, C subunit, N-terminal; SPTR: Endo/excinuclease amino terminal domain protein; excinuclease ABC C subunit domain-containing protein 2350076 11054975 Murru_2141 Muricauda ruestringensis DSM 13258 excinuclease ABC C subunit domain-containing protein YP_004788602.1 2349792 R 886377 CDS YP_004788603.1 344203460 11054976 complement(2350357..2350929) 1 NC_015945.1 PFAM: YceI-like domain; COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: fbc:FB2170_16276 YCE I like family protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like; SPTR: YCE I like family protein; hypothetical protein 2350929 11054976 Murru_2142 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788603.1 2350357 R 886377 CDS YP_004788604.1 344203461 11054977 complement(2350972..2351604) 1 NC_015945.1 PFAM: Nitroreductase family; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: fps:FP0515 nitroreductase; PFAM: Nitroreductase-like; SPTR: Putative uncharacterized protein; nitroreductase 2351604 11054977 Murru_2143 Muricauda ruestringensis DSM 13258 nitroreductase YP_004788604.1 2350972 R 886377 CDS YP_004788605.1 344203462 11054978 complement(2351610..2352056) 1 NC_015945.1 PFAM: MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: fbc:FB2170_16271 hypothetical 161 kDa transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; MarR family transcriptional regulator 2352056 11054978 Murru_2144 Muricauda ruestringensis DSM 13258 MarR family transcriptional regulator YP_004788605.1 2351610 R 886377 CDS YP_004788606.1 344203463 11054979 2352191..2352745 1 NC_015945.1 PFAM: AhpC/TSA family; InterPro IPR000866; KEGG: rbi:RB2501_02175 thioredoxin family protein; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Redoxin; alkyl hydroperoxide reductase 2352745 11054979 Murru_2145 Muricauda ruestringensis DSM 13258 alkyl hydroperoxide reductase YP_004788606.1 2352191 D 886377 CDS YP_004788607.1 344203464 11054980 2352752..2353384 1 NC_015945.1 PFAM: AhpC/TSA family; InterPro IPR000866; KEGG: cat:CA2559_06425 hypothetical protein; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Thiol-disulfide isomerase or thioredoxin; alkyl hydroperoxide reductase 2353384 11054980 Murru_2146 Muricauda ruestringensis DSM 13258 alkyl hydroperoxide reductase YP_004788607.1 2352752 D 886377 CDS YP_004788608.1 344203465 11054981 2353465..2353776 1 NC_015945.1 PFAM: Rhodanese-like domain; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: rbi:RB2501_02165 rhodanese-like domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Rhodanese-like domain protein; rhodanese-like protein 2353776 11054981 Murru_2147 Muricauda ruestringensis DSM 13258 rhodanese-like protein YP_004788608.1 2353465 D 886377 CDS YP_004788609.1 344203466 11054982 2353798..2355078 1 NC_015945.1 PFAM: Protein of unknown function (DUF2851); KEGG: fbc:FB2170_16261 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2355078 11054982 Murru_2148 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788609.1 2353798 D 886377 CDS YP_004788610.1 344203467 11054983 2355087..2355314 1 NC_015945.1 PFAM: PspC domain; KEGG: rbi:RB2501_02160 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2355314 11054983 Murru_2149 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788610.1 2355087 D 886377 CDS YP_004788611.1 344203468 11054984 2355317..2356324 1 NC_015945.1 PFAM: TrkA-N domain; Ion channel; TrkA-C domain; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR013099:IPR003148:IPR006037; KEGG: rbi:RB2501_02155 potassium uptake protein, TrkA family; PFAM: Regulator of K+ conductance, N-terminal; Ion transport 2; Regulator of K+ conductance, C-terminal; SPTR: Potassium uptake protein, TrkA family; TrkA-N domain-containing protein 2356324 11054984 Murru_2150 Muricauda ruestringensis DSM 13258 TrkA-N domain-containing protein YP_004788611.1 2355317 D 886377 CDS YP_004788612.1 344203469 11054985 2356410..2358473 1 NC_015945.1 PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein; COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: rbi:RB2501_02150 sodium/alanine symporter; PFAM: Sodium:alanine symporter; SPTR: Sodium/alanine symporter; TIGRFAM: Sodium:alanine symporter; amino acid carrier protein 2358473 11054985 Murru_2151 Muricauda ruestringensis DSM 13258 amino acid carrier protein YP_004788612.1 2356410 D 886377 CDS YP_004788613.1 344203470 11054986 2358493..2359347 1 NC_015945.1 COGs: COG1555 DNA uptake protein and related DNA-binding protein; KEGG: fbc:FB2170_16241 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2359347 11054986 Murru_2152 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788613.1 2358493 D 886377 CDS YP_004788614.1 344203471 11054987 2359358..2360527 1 NC_015945.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: zpr:ZPR_1152 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; PRIAM: Isovaleryl-CoA dehydrogenase; SPTR: Acyl-CoA dehydrogenase; isovaleryl-CoA dehydrogenase 2360527 11054987 Murru_2153 Muricauda ruestringensis DSM 13258 isovaleryl-CoA dehydrogenase YP_004788614.1 2359358 D 886377 CDS YP_004788615.1 344203472 11054988 2360621..2360815 1 NC_015945.1 PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; HAMAP: Ribosomal protein S21; InterPro IPR001911; KEGG: fbc:FB2170_16231 30S ribosomal protein S21; PFAM: Ribosomal protein S21; SPTR: 30S ribosomal protein S21; TIGRFAM: Ribosomal protein S21; 30S ribosomal protein S21 2360815 11054988 Murru_2154 Muricauda ruestringensis DSM 13258 30S ribosomal protein S21 YP_004788615.1 2360621 D 886377 CDS YP_004788616.1 344203473 11054989 2360913..2361803 1 NC_015945.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR004107:IPR002104; KEGG: fbc:FB2170_16226 putative site-specific recombinase; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: Putative site-specific recombinase; tyrosine recombinase XerC 2361803 11054989 Murru_2155 Muricauda ruestringensis DSM 13258 tyrosine recombinase XerC YP_004788616.1 2360913 D 886377 CDS YP_004788617.1 344203474 11054990 2361858..2362160 1 NC_015945.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; InterPro IPR003489; KEGG: fbc:FB2170_16221 sigma-54 modulation protein; SPTR: Sigma-54 modulation protein; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; ribosomal subunit interface protein 2362160 11054990 Murru_2156 Muricauda ruestringensis DSM 13258 ribosomal subunit interface protein YP_004788617.1 2361858 D 886377 CDS YP_004788618.1 344203475 11054995 2362802..2363989 1 NC_015945.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; COGs: COG0050 GTPase - translation elongation factors; InterProIPR004541:IPR005225:IPR000795:IPR004161:IPR 004160; KEGG: rbi:RB2501_02110 elongation factor Tu; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; SPTR: Elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; translation elongation factor Tu 2363989 11054995 Murru_2157 Muricauda ruestringensis DSM 13258 translation elongation factor Tu YP_004788618.1 2362802 D 886377 CDS YP_004788619.1 344203476 11054997 2364158..2364346 1 NC_015945.1 PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial; InterPro IPR005807; KEGG: fbc:FB2170_16211 elongation factor Tu; SPTR: Elongation factor Tu; TIGRFAM: SecE subunit of protein translocation complex; preprotein translocase subunit SecE 2364346 11054997 Murru_2158 Muricauda ruestringensis DSM 13258 preprotein translocase subunit SecE YP_004788619.1 2364158 D 886377 CDS YP_004788620.1 344203477 11054998 2364359..2364910 1 NC_015945.1 PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; COGs: COG0250 Transcription antiterminator; InterPro IPR006645:IPR005824:IPR001062; KEGG: rbi:RB2501_02100 putative transcription antitermination protein; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; SMART: Transcription antitermination protein, NusG, N-terminal; KOW; SPTR: Transcription antitermination protein nusG; TIGRFAM: Transcription antitermination protein, NusG; NusG antitermination factor 2364910 11054998 Murru_2159 Muricauda ruestringensis DSM 13258 NusG antitermination factor YP_004788620.1 2364359 D 886377 CDS YP_004788621.1 344203478 11054999 2364978..2365415 1 NC_015945.1 PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11; COGs: COG0080 Ribosomal protein L11; InterPro IPR000911:IPR006519:IPR020784:IPR020783; KEGG: fbc:FB2170_16201 50S ribosomal protein L11; PFAM: Ribosomal protein L11, N-terminal domain; Ribosomal protein L11, C-terminal domain; SMART: Ribosomal protein L11; SPTR: 50S ribosomal protein L11; TIGRFAM: Ribosomal protein L11, bacterial-type; 50S ribosomal protein L11 2365415 11054999 Murru_2160 Muricauda ruestringensis DSM 13258 50S ribosomal protein L11 YP_004788621.1 2364978 D 886377 CDS YP_004788622.1 344203479 11055000 2365438..2366130 1 NC_015945.1 PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast; COGs: COG0081 Ribosomal protein L1; InterPro IPR005878:IPR002143; KEGG: rbi:RB2501_02090 50S ribosomal protein L1; PFAM: Ribosomal protein L1; SPTR: 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; 50S ribosomal protein L1 2366130 11055000 Murru_2161 Muricauda ruestringensis DSM 13258 50S ribosomal protein L1 YP_004788622.1 2365438 D 886377 CDS YP_004788623.1 344203480 11055001 2366154..2366672 1 NC_015945.1 PFAM: Ribosomal protein L10; COGs: COG0244 Ribosomal protein L10; HAMAP: Ribosomal protein L10; InterPro IPR022973:IPR001790; KEGG: rbi:RB2501_02085 50S ribosomal protein L10; PFAM: Ribosomal protein L10/acidic P0; SPTR: 50S ribosomal protein L10; 50S ribosomal protein L10 2366672 11055001 Murru_2162 Muricauda ruestringensis DSM 13258 50S ribosomal protein L10 YP_004788623.1 2366154 D 886377 CDS YP_004788624.1 344203481 11055002 2366728..2367111 1 NC_015945.1 PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12; COGs: COG0222 Ribosomal protein L7/L12; HAMAP: Ribosomal protein L7/L12; InterPro IPR000206:IPR013823; KEGG: rbi:RB2501_02080 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal; SPTR: 50S ribosomal protein L7/L12; TIGRFAM: Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 2367111 11055002 Murru_2163 Muricauda ruestringensis DSM 13258 50S ribosomal protein L7/L12 YP_004788624.1 2366728 D 886377 CDS YP_004788625.1 344203482 11055003 2367240..2371049 1 NC_015945.1 PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit; COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; HAMAP: DNA-directed RNA polymerase, beta subunit, bacterial-type; InterProIPR010243:IPR007644:IPR007642:IPR007645:IPR 019462:IPR007120:IPR007641; KEGG: rbi:RB2501_02075 DNA-directed RNA polymerase subunit beta; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 2; RNA polymerase, beta subunit, protrusion; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7; SPTR: DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; DNA-directed RNA polymerase subunit beta 2371049 11055003 Murru_2164 Muricauda ruestringensis DSM 13258 DNA-directed RNA polymerase subunit beta YP_004788625.1 2367240 D 886377 CDS YP_004788626.1 344203483 11055004 2371088..2375386 1 NC_015945.1 PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form; COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit; HAMAP: DNA-directed RNA polymerase, subunit beta-prime; InterProIPR006592:IPR012754:IPR007080:IPR000722:IPR 007066:IPR007083:IPR007081; KEGG: fbc:FB2170_16176 DNA-directed RNA polymerase subunit beta'; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5; SMART: RNA polymerase, N-terminal; SPTR: DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; DNA-directed RNA polymerase subunit beta' 2375386 11055004 Murru_2165 Muricauda ruestringensis DSM 13258 DNA-directed RNA polymerase subunit beta' YP_004788626.1 2371088 D 886377 CDS YP_004788627.1 344203484 11055005 2375440..2375751 1 NC_015945.1 PFAM: Protein of unknown function (DUF3467); KEGG: fbc:FB2170_16171 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2375751 11055005 Murru_2166 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788627.1 2375440 D 886377 CDS YP_004788628.1 344203485 11055006 complement(2375905..2376336) 1 NC_015945.1 KEGG: fbc:FB2170_11181 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2376336 11055006 Murru_2167 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788628.1 2375905 R 886377 CDS YP_004788629.1 344203486 11055007 complement(2376444..2378078) 1 NC_015945.1 PFAM: Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3; COGs: COG4108 Peptide chain release factor RF-3; InterPro IPR004548:IPR005225:IPR000795; KEGG: fbc:FB2170_16166 peptide chain release factor 3; PFAM: Protein synthesis factor, GTP-binding; SPTR: Peptide chain release factor 3; TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein; peptide chain release factor 3 2378078 11055007 Murru_2168 Muricauda ruestringensis DSM 13258 peptide chain release factor 3 YP_004788629.1 2376444 R 886377 CDS YP_004788630.1 344203487 11055008 2378430..2382218 1 NC_015945.1 InterPro IPR003367; KEGG: fbc:FB2170_16161 AraC family transcriptional regulator; SPTR: Transcriptional regulator, AraC family with parallel beta-helix repeat; hypothetical protein 2382218 11055008 Murru_2169 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788630.1 2378430 D 886377 CDS YP_004788631.1 344203488 11055009 2382231..2383178 1 NC_015945.1 PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: rbi:RB2501_02045 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein 2383178 11055009 Murru_2170 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788631.1 2382231 D 886377 CDS YP_004788632.1 344203489 11055010 2383190..2385139 1 NC_015945.1 PFAM: WD40-like Beta Propeller Repeat; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR006665; KEGG: fbc:FB2170_16151 OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: OmpA family protein; OmpA/MotB domain-containing protein 2385139 11055010 Murru_2171 Muricauda ruestringensis DSM 13258 OmpA/MotB domain-containing protein YP_004788632.1 2383190 D 886377 CDS YP_004788633.1 344203490 11055011 2385349..2385486 1 NC_015945.1 hypothetical protein 2385486 11055011 Murru_2172 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788633.1 2385349 D 886377 CDS YP_004788634.1 344203491 11055012 2385554..2387170 1 NC_015945.1 PFAM: Collagen triple helix repeat (20 copies); InterPro IPR008160; KEGG: bcy:Bcer98_2389 triple helix repeat-containing collagen; PFAM: Collagen triple helix repeat; SPTR: Collagen triple helix repeat; collagen triple helix repeat-containing protein 2387170 11055012 Murru_2173 Muricauda ruestringensis DSM 13258 collagen triple helix repeat-containing protein YP_004788634.1 2385554 D 886377 CDS YP_004788635.1 344203492 11055013 2387194..2389221 1 NC_015945.1 InterPro IPR003367; KEGG: fbc:FB2170_16126 VCBS protein; SPTR: VCBS protein; VCBS protein 2389221 11055013 Murru_2174 Muricauda ruestringensis DSM 13258 VCBS protein YP_004788635.1 2387194 D 886377 CDS YP_004788636.1 344203493 11055014 2389225..2390178 1 NC_015945.1 PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: fbc:FB2170_16121 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein 2390178 11055014 Murru_2175 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788636.1 2389225 D 886377 CDS YP_004788637.1 344203494 11055015 2390235..2390768 1 NC_015945.1 PFAM: NUDIX domain; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; COGs: COG1443 Isopentenyldiphosphate isomerase; HAMAP: Isopentenyl-diphosphate delta-isomerase, type 1; InterPro IPR011876:IPR000086; KEGG: fbc:FB2170_16116 putative isopentenyl-diphosphate delta-isomerase; PFAM: NUDIX hydrolase domain; PRIAM: Isopentenyl-diphosphate Delta-isomerase; SPTR: Putative isopentenyl-diphosphate delta-isomerase; TIGRFAM: Isopentenyl-diphosphate delta-isomerase, type 1; Isopentenyl-diphosphate Delta-isomerase 2390768 11055015 Murru_2176 Muricauda ruestringensis DSM 13258 Isopentenyl-diphosphate Delta-isomerase YP_004788637.1 2390235 D 886377 CDS YP_004788638.1 344203495 11055016 2390765..2391172 1 NC_015945.1 PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: 6-pyruvoyl tetrahydropterin synthase/QueD family protein; COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: fbc:FB2170_16111 putative 6-pyruvoyl tetrahydropterin synthase; PFAM: 6-pyruvoyl tetrahydropterin synthase-related; SPTR: Putative 6-pyruvoyl tetrahydropterin synthase; hypothetical protein 2391172 11055016 Murru_2177 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788638.1 2390765 D 886377 CDS YP_004788639.1 344203496 11055017 2391174..2392142 1 NC_015945.1 PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I; COGs: COG1482 Phosphomannose isomerase; InterPro IPR001250; KEGG: fbc:FB2170_16106 mannose-6-phosphate isomerase; PFAM: Mannose-6-phosphate isomerase, type I; PRIAM: Mannose-6-phosphate isomerase; SPTR: Mannose-6-phosphate isomerase; TIGRFAM: Mannose-6-phosphate isomerase, type I; mannose-6-phosphate isomerase 2392142 11055017 Murru_2178 Muricauda ruestringensis DSM 13258 mannose-6-phosphate isomerase YP_004788639.1 2391174 D 886377 CDS YP_004788640.1 344203497 11055018 2392171..2392443 1 NC_015945.1 KEGG: fbc:FB2170_16101 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2392443 11055018 Murru_2179 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788640.1 2392171 D 886377 CDS YP_004788641.1 344203498 11055019 complement(2392440..2393141) 1 NC_015945.1 KEGG: fbc:FB2170_16096 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2393141 11055019 Murru_2180 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788641.1 2392440 R 886377 CDS YP_004788642.1 344203499 11055020 complement(2393184..2394446) 1 NC_015945.1 PFAM: Protein of unknown function (DUF819); COGs: COG5505 integral membrane protein; InterPro IPR008537; KEGG: fbc:FB2170_16091 hypothetical protein; PFAM: Protein of unknown function DUF819; SPTR: Putative uncharacterized protein; hypothetical protein 2394446 11055020 Murru_2181 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788642.1 2393184 R 886377 CDS YP_004788643.1 344203500 11055021 complement(2394602..2396800) 1 NC_015945.1 PFAM: Domain of unknown function (DUF1083); KEGG: fbc:FB2170_16081 putative membrane associated hydrolase; SPTR: Putative membrane associated hydrolase; putative membrane associated hydrolase 2396800 11055021 Murru_2182 Muricauda ruestringensis DSM 13258 putative membrane associated hydrolase YP_004788643.1 2394602 R 886377 CDS YP_004788644.1 344203501 11055022 2396953..2397723 1 NC_015945.1 PFAM: S1/P1 Nuclease; InterPro IPR003154; KEGG: fbc:FB2170_16071 putative S1/P1 nuclease; PFAM: S1/P1 nuclease; SPTR: Putative S1/P1 Nuclease; S1/P1 nuclease 2397723 11055022 Murru_2183 Muricauda ruestringensis DSM 13258 S1/P1 nuclease YP_004788644.1 2396953 D 886377 CDS YP_004788645.1 344203502 11055023 complement(2397729..2398601) 1 NC_015945.1 PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: fbc:FB2170_16056 activator protein MtlR; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Activator protein MtlR; AraC family transcriptional regulator 2398601 11055023 Murru_2184 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004788645.1 2397729 R 886377 CDS YP_004788646.1 344203503 11055024 2398817..2399194 1 NC_015945.1 KEGG: fbc:FB2170_16051 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2399194 11055024 Murru_2185 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788646.1 2398817 D 886377 CDS YP_004788647.1 344203504 11055025 complement(2399244..2399876) 1 NC_015945.1 PFAM: MOSC domain; COGs: COG2258 conserved hypothetical protein; InterPro IPR005302; KEGG: fbc:FB2170_16046 hypothetical protein; PFAM: Molybdenum cofactor sulfurase, C-terminal; SPTR: Putative uncharacterized protein; MOSC domain-containing protein 2399876 11055025 Murru_2186 Muricauda ruestringensis DSM 13258 MOSC domain-containing protein YP_004788647.1 2399244 R 886377 CDS YP_004788648.1 344203505 11055026 complement(2399945..2400298) 1 NC_015945.1 KEGG: gfo:GFO_0526 membrane protein; SPTR: Membrane protein; membrane protein 2400298 11055026 Murru_2187 Muricauda ruestringensis DSM 13258 membrane protein YP_004788648.1 2399945 R 886377 CDS YP_004788649.1 344203506 11055027 2400433..2401011 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: fjo:Fjoh_1133 ECF subfamily RNA polymerase sigma-24 factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 2401011 11055027 Murru_2188 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004788649.1 2400433 D 886377 CDS YP_004788650.1 344203507 11055028 2401004..2401414 1 NC_015945.1 KEGG: fjo:Fjoh_1132 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2401414 11055028 Murru_2189 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788650.1 2401004 D 886377 CDS YP_004788651.1 344203508 11055029 complement(2401579..2403078) 1 NC_015945.1 PFAM: Bacterial Ig-like domain (group 2); IPT/TIG domain; InterPro IPR002909:IPR003343; KEGG: phe:Phep_2967 hypothetical protein; PFAM: Bacterial Ig-like, group 2; Cell surface receptor IPT/TIG; SMART: Bacterial Ig-like, group 2; Cell surface receptor IPT/TIG; SPTR: Putative uncharacterized protein; Ig domain-containing protein 2403078 11055029 Murru_2190 Muricauda ruestringensis DSM 13258 Ig domain-containing protein YP_004788651.1 2401579 R 886377 CDS YP_004788652.1 344203509 11055030 complement(2403178..2403537) 1 NC_015945.1 COGs: COG4270 membrane protein; KEGG: gfo:GFO_2346 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 2403537 11055030 Murru_2191 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788652.1 2403178 R 886377 CDS YP_004788653.1 344203510 11055031 complement(2403600..2405486) 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein; COGs: COG0326 Molecular chaperone HSP90 family; InterPro IPR003594:IPR020576; KEGG: fbc:FB2170_16006 heat shock protein 90; PFAM: Heat shock protein Hsp90, C-terminal; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Heat shock protein 90; Heat shock protein Hsp90 2405486 11055031 Murru_2192 Muricauda ruestringensis DSM 13258 Heat shock protein Hsp90 YP_004788653.1 2403600 R 886377 CDS YP_004788654.1 344203511 11055032 2405822..2406478 1 NC_015945.1 KEGG: zpr:ZPR_1192 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2406478 11055032 Murru_2193 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788654.1 2405822 D 886377 CDS YP_004788655.1 344203512 11055033 2406484..2407794 1 NC_015945.1 PFAM: ABC1 family; COGs: COG0661 unusual protein kinase; InterPro IPR004147; KEGG: rbi:RB2501_01910 ABC1 family protein; PFAM: ABC-1; SPTR: ABC-1; ABC-1 domain-containing protein 2407794 11055033 Murru_2194 Muricauda ruestringensis DSM 13258 ABC-1 domain-containing protein YP_004788655.1 2406484 D 886377 CDS YP_004788656.1 344203513 11055034 2407890..2408900 1 NC_015945.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); InterPro IPR004655:IPR013751:IPR013747; KEGG: fbc:FB2170_16001 3-oxoacyl-(acyl carrier protein) synthase; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase III; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase 3 2; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); 3-oxoacyl-ACP synthase 2408900 11055034 Murru_2195 Muricauda ruestringensis DSM 13258 3-oxoacyl-ACP synthase YP_004788656.1 2407890 D 886377 CDS YP_004788657.1 344203514 11055035 complement(2409022..2411472) 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR017690:IPR012910:IPR000531; KEGG: fbc:FB2170_15996 TonB-dependent receptor domain-containing protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor domain protein; TIGRFAM: Outer membrane insertion C-terminal signal, omp85; outer membrane insertion C-terminal signal protein 2411472 11055035 Murru_2196 Muricauda ruestringensis DSM 13258 outer membrane insertion C-terminal signal protein YP_004788657.1 2409022 R 886377 CDS YP_004788658.1 344203515 11055036 2411822..2412181 1 NC_015945.1 KEGG: cat:CA2559_07570 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2412181 11055036 Murru_2197 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788658.1 2411822 D 886377 CDS YP_004788659.1 344203516 11055037 complement(2412165..2413652) 1 NC_015945.1 PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: fbc:FB2170_15986 putative cation symporter; PFAM: Sodium/solute symporter; SPTR: Putative cation symporter; Na+/solute symporter 2413652 11055037 Murru_2198 Muricauda ruestringensis DSM 13258 Na+/solute symporter YP_004788659.1 2412165 R 886377 CDS YP_004788660.1 344203517 11055038 2413729..2414349 1 NC_015945.1 PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR; COGs: COG0353 Recombinational DNA repair protein (RecF pathway); HAMAP: RecR protein; InterPro IPR006171:IPR000093:IPR015967; KEGG: fbc:FB2170_15981 recombination protein RecR; SMART: Toprim domain; SPTR: Recombination protein recR; TIGRFAM: RecR protein; Recombination protein recR 2414349 11055038 Murru_2199 Muricauda ruestringensis DSM 13258 Recombination protein recR YP_004788660.1 2413729 D 886377 CDS YP_004788661.1 344203518 11055039 2414429..2415790 1 NC_015945.1 PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089:IPR004167:IPR001078; KEGG: fbc:FB2170_15976 lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; PRIAM: Dihydrolipoyllysine-residue succinyltransferase; SPTR: Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex; dihydrolipoyllysine-residue succinyltransferase 2415790 11055039 Murru_2200 Muricauda ruestringensis DSM 13258 dihydrolipoyllysine-residue succinyltransferase YP_004788661.1 2414429 D 886377 CDS YP_004788662.1 344203519 11055040 2415863..2416636 1 NC_015945.1 PFAM: Exonuclease; COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR006055:IPR013520; KEGG: fbc:FB2170_15966 putative DNA polymerase III subunit epsilon; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease; SPTR: Putative DNA polymerase III epsilon chain; Exonuclease RNase T and DNA polymerase III 2416636 11055040 Murru_2201 Muricauda ruestringensis DSM 13258 Exonuclease RNase T and DNA polymerase III YP_004788662.1 2415863 D 886377 CDS YP_004788663.1 344203520 11055041 2416666..2417277 1 NC_015945.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family; COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: fbc:FB2170_15956 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; PFAM: Fumarylacetoacetase, C-terminal-like; SPTR: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; fumarylacetoacetate (FAA) hydrolase 2417277 11055041 Murru_2202 Muricauda ruestringensis DSM 13258 fumarylacetoacetate (FAA) hydrolase YP_004788663.1 2416666 D 886377 CDS YP_004788664.1 344203521 11055042 2417277..2417615 1 NC_015945.1 PFAM: Hpt domain; InterPro IPR008207; KEGG: rbi:RB2501_01865 hypothetical protein; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SPTR: Putative uncharacterized protein; Hpt domain-containing protein 2417615 11055042 Murru_2203 Muricauda ruestringensis DSM 13258 Hpt domain-containing protein YP_004788664.1 2417277 D 886377 CDS YP_004788665.1 344203522 11055043 2417616..2418866 1 NC_015945.1 PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain; COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR001453:IPR008135:IPR008136; KEGG: fbc:FB2170_15946 putative competence-damage inducible; PFAM: CinA, C-terminal; Molybdopterin binding; SMART: Molybdopterin binding; SPTR: CinA-like protein; TIGRFAM: Competence-induced protein CinA; CinA, C-terminal; competence/damage-inducible protein CinA 2418866 11055043 Murru_2204 Muricauda ruestringensis DSM 13258 competence/damage-inducible protein CinA YP_004788665.1 2417616 D 886377 CDS YP_004788666.1 344203523 11055044 2418941..2419168 1 NC_015945.1 PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; COGs: COG0227 Ribosomal protein L28; HAMAP: Ribosomal protein L28; InterPro IPR001383; KEGG: rbi:RB2501_01855 50S ribosomal protein L28; PFAM: Ribosomal protein L28; SPTR: 50S ribosomal protein L28; TIGRFAM: Ribosomal protein L28; 50S ribosomal protein L28 2419168 11055044 Murru_2205 Muricauda ruestringensis DSM 13258 50S ribosomal protein L28 YP_004788666.1 2418941 D 886377 CDS YP_004788667.1 344203524 11055045 2419197..2419379 1 NC_015945.1 PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; HAMAP: Ribosomal protein L33; InterPro IPR001705; KEGG: rbi:RB2501_01850 50S ribosomal protein L33; PFAM: Ribosomal protein L33; SPTR: 50S ribosomal protein L33; TIGRFAM: Ribosomal protein L33; 50S ribosomal protein L33 2419379 11055045 Murru_2206 Muricauda ruestringensis DSM 13258 50S ribosomal protein L33 YP_004788667.1 2419197 D 886377 CDS YP_004788668.1 344203525 11055046 2419418..2419570 1 NC_015945.1 KEGG: fbc:FB2170_15931 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2419570 11055046 Murru_2207 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788668.1 2419418 D 886377 CDS YP_004788669.1 344203526 11055047 2419744..2420700 1 NC_015945.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY; COGs: COG0552 Signal recognition particle GTPase; InterPro IPR013822:IPR003593:IPR000897:IPR004390; KEGG: fbc:FB2170_15926 putative recognition particle-docking protein; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core; SPTR: Putative recognition particle-docking protein; TIGRFAM: Cell division transporter substrate-binding protein FtsY; signal recognition particle-docking protein FtsY 2420700 11055047 Murru_2208 Muricauda ruestringensis DSM 13258 signal recognition particle-docking protein FtsY YP_004788669.1 2419744 D 886377 CDS YP_004788670.1 344203527 11055048 2420706..2422367 1 NC_015945.1 PFAM: Amidase; COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR000120; KEGG: rbi:RB2501_01835 amidase; PFAM: Amidase; PRIAM: Amidase; SPTR: Amidase; amidase 2422367 11055048 Murru_2209 Muricauda ruestringensis DSM 13258 amidase YP_004788670.1 2420706 D 886377 CDS YP_004788671.1 344203528 11055049 2422484..2423785 1 NC_015945.1 PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family; COGs: COG0621 2-methylthioadenine synthetase; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; InterProIPR006638:IPR005839:IPR005840:IPR013848:IPR 007197:IPR002792; KEGG: zpr:ZPR_1253 radical SAM superfamily protein, UPF0004; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: 2-methylthioadenine synthetase; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; 30S ribosomal protein S12 methylthiotransferase RimO 2423785 11055049 Murru_2210 Muricauda ruestringensis DSM 13258 30S ribosomal protein S12 methylthiotransferase RimO YP_004788671.1 2422484 D 886377 CDS YP_004788672.1 344203529 11055050 complement(2423837..2424043) 1 NC_015945.1 hypothetical protein 2424043 11055050 Murru_2211 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788672.1 2423837 R 886377 CDS YP_004788673.1 344203530 11055051 2424108..2424587 1 NC_015945.1 PFAM: DoxX; InterPro IPR011637; KEGG: fbc:FB2170_08079 hypothetical protein; PFAM: Uncharacterised protein family YphA; SPTR: Putative uncharacterized protein; DoxX family protein 2424587 11055051 Murru_2212 Muricauda ruestringensis DSM 13258 DoxX family protein YP_004788673.1 2424108 D 886377 CDS YP_004788674.1 344203531 11055052 2424584..2426200 1 NC_015945.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: fbc:FB2170_08084 hypothetical protein; PFAM: Oxidoreductase, N-terminal; SPTR: Putative uncharacterized protein; oxidoreductase domain-containing protein 2426200 11055052 Murru_2213 Muricauda ruestringensis DSM 13258 oxidoreductase domain-containing protein YP_004788674.1 2424584 D 886377 CDS YP_004788675.1 344203532 11055053 complement(2426318..2427451) 1 NC_015945.1 KEGG: fbc:FB2170_00530 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2427451 11055053 Murru_2214 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788675.1 2426318 R 886377 CDS YP_004788676.1 344203533 11055054 complement(2427462..2427719) 1 NC_015945.1 KEGG: fbc:FB2170_00525 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2427719 11055054 Murru_2215 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788676.1 2427462 R 886377 CDS YP_004788677.1 344203534 11055055 complement(2427724..2428176) 1 NC_015945.1 PFAM: Polyketide cyclase / dehydrase and lipid transport; KEGG: fbc:FB2170_00520 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2428176 11055055 Murru_2216 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788677.1 2427724 R 886377 CDS YP_004788678.1 344203535 11055056 2428243..2429175 1 NC_015945.1 KEGG: fbc:FB2170_00515 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2429175 11055056 Murru_2217 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788678.1 2428243 D 886377 CDS YP_004788679.1 344203536 11055057 2429144..2430559 1 NC_015945.1 PFAM: PPIC-type PPIASE domain; InterPro IPR015391:IPR000297; KEGG: fbc:FB2170_00510 putative exported peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SurA N-terminal; SPTR: Putative exported peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 2430559 11055057 Murru_2218 Muricauda ruestringensis DSM 13258 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004788679.1 2429144 D 886377 CDS YP_004788680.1 344203537 11055058 2430564..2431517 1 NC_015945.1 PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0714 MoxR-like ATPase; InterPro IPR011703; KEGG: fbc:FB2170_00505 methanol dehydrogenase regulator; PFAM: ATPase, AAA-3; SPTR: Methanol dehydrogenase regulator; ATPase 2431517 11055058 Murru_2219 Muricauda ruestringensis DSM 13258 ATPase YP_004788680.1 2430564 D 886377 CDS YP_004788681.1 344203538 11055059 2431622..2433889 1 NC_015945.1 PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase, mitochondrial; COGs: COG1048 Aconitase A; InterPro IPR006248:IPR001030:IPR000573; KEGG: fbc:FB2170_00500 aconitate hydratase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel; SPTR: Aconitate hydratase; TIGRFAM: Aconitase, mitochondrial-like; aconitate hydratase 2433889 11055059 Murru_2220 Muricauda ruestringensis DSM 13258 aconitate hydratase YP_004788681.1 2431622 D 886377 CDS YP_004788682.1 344203539 11055060 2434133..2434693 1 NC_015945.1 PFAM: AhpC/TSA family; KEGG: rbi:RB2501_11832 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2434693 11055060 Murru_2221 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788682.1 2434133 D 886377 CDS YP_004788683.1 344203540 11055061 2434690..2435256 1 NC_015945.1 PFAM: Redoxin; InterPro IPR013740; KEGG: fbc:FB2170_00490 thioredoxin; PFAM: Redoxin; SPTR: Thioredoxin; redoxin domain-containing protein 2435256 11055061 Murru_2222 Muricauda ruestringensis DSM 13258 redoxin domain-containing protein YP_004788683.1 2434690 D 886377 CDS YP_004788684.1 344203541 11055062 complement(2435260..2435712) 1 NC_015945.1 PFAM: Fatty acid hydroxylase superfamily; InterPro IPR006694; KEGG: rbi:RB2501_11837 beta carotene hydroxylase; PFAM: Fatty acid hydroxylase; SPTR: Beta carotene hydroxylase; fatty acid hydroxylase 2435712 11055062 Murru_2223 Muricauda ruestringensis DSM 13258 fatty acid hydroxylase YP_004788684.1 2435260 R 886377 CDS YP_004788685.1 344203542 11055063 complement(2435709..2436551) 1 NC_015945.1 PFAM: Squalene/phytoene synthase; COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR002060; KEGG: rbi:RB2501_11842 putative phytoene synthase; PFAM: Squalene/phytoene synthase; PRIAM: Phytoene synthase; SPTR: Putative phytoene synthase; phytoene synthase 2436551 11055063 Murru_2224 Muricauda ruestringensis DSM 13258 phytoene synthase YP_004788685.1 2435709 R 886377 CDS YP_004788686.1 344203543 11055064 complement(2436548..2438008) 1 NC_015945.1 PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR014105:IPR006076; KEGG: rbi:RB2501_11847 phytoene dehydrogenase; PFAM: FAD dependent oxidoreductase; SPTR: Phytoene desaturase; TIGRFAM: Zeta-phytoene desaturase; phytoene desaturase 2438008 11055064 Murru_2225 Muricauda ruestringensis DSM 13258 phytoene desaturase YP_004788686.1 2436548 R 886377 CDS YP_004788687.1 344203544 11055065 complement(2438015..2438914) 1 NC_015945.1 InterPro IPR000551; KEGG: rbi:RB2501_11852 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; SPTR: Transcriptional regulator, MerR family protein; regulatory protein MerR 2438914 11055065 Murru_2226 Muricauda ruestringensis DSM 13258 regulatory protein MerR YP_004788687.1 2438015 R 886377 CDS YP_004788688.1 344203545 11055066 2439015..2439140 1 NC_015945.1 hypothetical protein 2439140 11055066 Murru_2227 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788688.1 2439015 D 886377 CDS YP_004788689.1 344203546 11055067 complement(2439153..2440763) 1 NC_015945.1 PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein; COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: fbc:FB2170_16246 putative Na(+)-linked D-alanine glycine permease; PFAM: Sodium:alanine symporter; SPTR: Putative Na(+)-linked D-alanine glycine permease; TIGRFAM: Sodium:alanine symporter; amino acid carrier protein 2440763 11055067 Murru_2228 Muricauda ruestringensis DSM 13258 amino acid carrier protein YP_004788689.1 2439153 R 886377 CDS YP_004788690.1 344203547 11055068 complement(2440870..2441973) 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 2441973 11055068 Murru_2229 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788690.1 2440870 R 886377 CDS YP_004788691.1 344203548 11055070 2442478..2443749 1 NC_015945.1 PFAM: Mechanosensitive ion channel; COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: rbi:RB2501_10842 putative membrane transport protein; PFAM: Mechanosensitive ion channel MscS; SPTR: Putative membrane transport protein; mechanosensitive ion channel protein MscS 2443749 11055070 Murru_2230 Muricauda ruestringensis DSM 13258 mechanosensitive ion channel protein MscS YP_004788691.1 2442478 D 886377 CDS YP_004788692.1 344203549 11055071 complement(2443753..2444457) 1 NC_015945.1 PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD); COGs: COG0813 Purine-nucleoside phosphorylase; HAMAP: Purine nucleoside phosphorylase; InterPro IPR004402:IPR000845; KEGG: fbc:FB2170_00405 purine nucleoside phosphorylase; PFAM: Nucleoside phosphorylase domain; PRIAM: Purine-nucleoside phosphorylase; SPTR: Purine nucleoside phosphorylase; TIGRFAM: Purine nucleoside phosphorylase; purine nucleoside phosphorylase 2444457 11055071 Murru_2231 Muricauda ruestringensis DSM 13258 purine nucleoside phosphorylase YP_004788692.1 2443753 R 886377 CDS YP_004788693.1 344203550 11055072 complement(2444467..2445105) 1 NC_015945.1 PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase; COGs: COG0274 Deoxyribose-phosphate aldolase; HAMAP: Deoxyribose-phosphate aldolase, type 1; InterPro IPR011343:IPR022979:IPR002915; KEGG: ipo:Ilyop_1462 deoxyribose-phosphate aldolase; PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; PRIAM: Deoxyribose-phosphate aldolase; SPTR: Deoxyribose-phosphate aldolase; TIGRFAM: Deoxyribose-phosphate aldolase; Deoxyribose-phosphate aldolase 2445105 11055072 Murru_2232 Muricauda ruestringensis DSM 13258 Deoxyribose-phosphate aldolase YP_004788693.1 2444467 R 886377 CDS YP_004788694.1 344203551 11055073 complement(2445107..2445511) 1 NC_015945.1 KEGG: fbc:FB2170_14548 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2445511 11055073 Murru_2233 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788694.1 2445107 R 886377 CDS YP_004788695.1 344203552 11055074 complement(2445666..2446724) 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR000014:IPR003661:IPR003594:IPR013655; KEGG: mtt:Ftrac_2914 pas/pac sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; PAS fold-3; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Two-component system sensor histidine kinase; TIGRFAM: PAS; PAS/PAC sensor signal transduction histidine kinase 2446724 11055074 Murru_2234 Muricauda ruestringensis DSM 13258 PAS/PAC sensor signal transduction histidine kinase YP_004788695.1 2445666 R 886377 CDS YP_004788696.1 344203553 11055076 2447348..2447860 1 NC_015945.1 PFAM: Shikimate kinase; COGs: COG0703 Shikimate kinase; HAMAP: Shikimate kinase; InterPro IPR000623; KEGG: rbi:RB2501_12317 shikimate kinase; PFAM: Shikimate kinase; PRIAM: Shikimate kinase; SPTR: Shikimate kinase; shikimate kinase 2447860 11055076 Murru_2235 Muricauda ruestringensis DSM 13258 shikimate kinase YP_004788696.1 2447348 D 886377 CDS YP_004788697.1 344203554 11055077 complement(2447852..2448349) 1 NC_015945.1 PFAM: Phosphoribosyl transferase domain; COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; InterPro IPR000836; KEGG: rbi:RB2501_12322 pyrimidine regulatory protein PyrR; PFAM: Phosphoribosyltransferase; SPTR: Pyrimidine regulatory protein PyrR; phosphoribosyltransferase 2448349 11055077 Murru_2236 Muricauda ruestringensis DSM 13258 phosphoribosyltransferase YP_004788697.1 2447852 R 886377 CDS YP_004788698.1 344203555 11055078 complement(2448386..2448757) 1 NC_015945.1 PFAM: S4 domain; COGs: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); InterPro IPR002942; KEGG: fbc:FB2170_00080 heat shock protein 15; PFAM: RNA-binding S4; SMART: RNA-binding S4; SPTR: Heat shock protein 15; RNA-binding S4 domain-containing protein 2448757 11055078 Murru_2237 Muricauda ruestringensis DSM 13258 RNA-binding S4 domain-containing protein YP_004788698.1 2448386 R 886377 CDS YP_004788699.1 344203556 11055079 2448836..2449783 1 NC_015945.1 KEGG: rbi:RB2501_12337 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2449783 11055079 Murru_2238 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788699.1 2448836 D 886377 CDS YP_004788700.1 344203557 11055080 complement(2449860..2450471) 1 NC_015945.1 KEGG: fbc:FB2170_00070 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2450471 11055080 Murru_2239 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788700.1 2449860 R 886377 CDS YP_004788701.1 344203558 11055081 complement(2450521..2451474) 1 NC_015945.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR005475:IPR005476; KEGG: rbi:RB2501_12347 transketolase, C-terminal subunit; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: 1-deoxy-D-xylulose-5-phosphate synthase; SMART: Transketolase-like, pyrimidine-binding domain; SPTR: Transketolase, C-terminal subunit; 1-deoxy-D-xylulose-5-phosphate synthase 2451474 11055081 Murru_2240 Muricauda ruestringensis DSM 13258 1-deoxy-D-xylulose-5-phosphate synthase YP_004788701.1 2450521 R 886377 CDS YP_004788702.1 344203559 11055082 complement(2451493..2452338) 1 NC_015945.1 PFAM: Transketolase, thiamine diphosphate binding domain; COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474; KEGG: rbi:RB2501_12352 transketolase, N-terminal subunit; PFAM: Transketolase, N-terminal; PRIAM: Transketolase; SPTR: Transketolase, N-terminal subunit; transketolase 2452338 11055082 Murru_2241 Muricauda ruestringensis DSM 13258 transketolase YP_004788702.1 2451493 R 886377 CDS YP_004788703.1 344203560 11055083 2452495..2453625 1 NC_015945.1 PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming; COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase; HAMAP: Queuine tRNA-ribosyltransferase; InterPro IPR004803:IPR002616; KEGG: fjo:Fjoh_0045 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; PRIAM: tRNA-guanine transglycosylase; SPTR: Queuine tRNA-ribosyltransferase; TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 2453625 11055083 Murru_2242 Muricauda ruestringensis DSM 13258 queuine tRNA-ribosyltransferase YP_004788703.1 2452495 D 886377 CDS YP_004788704.1 344203561 11055084 2453625..2454707 1 NC_015945.1 PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: rbi:RB2501_12362 hypothetical protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Putative uncharacterized protein; YjgP/YjgQ family permease 2454707 11055084 Murru_2243 Muricauda ruestringensis DSM 13258 YjgP/YjgQ family permease YP_004788704.1 2453625 D 886377 CDS YP_004788705.1 344203562 11055085 2454822..2455775 1 NC_015945.1 PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; COGs: COG0825 Acetyl-CoA carboxylase alpha subunit; HAMAP: Acetyl-CoA carboxylase, alpha subunit; InterPro IPR001095; KEGG: fbc:FB2170_00050 acetyl-CoA carboxylase subunit alpha; PFAM: Acetyl-CoA carboxylase, alpha subunit; PRIAM: Acetyl-CoA carboxylase; SPTR: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: Acetyl-CoA carboxylase, alpha subunit; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 2455775 11055085 Murru_2244 Muricauda ruestringensis DSM 13258 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha YP_004788705.1 2454822 D 886377 CDS YP_004788706.1 344203563 11055086 2455943..2457490 1 NC_015945.1 PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase; COGs: COG0305 Replicative DNA helicase; InterPro IPR003593:IPR007692:IPR007693:IPR007694; KEGG: fbc:FB2170_00045 replicative DNA helicase; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; SMART: ATPase, AAA+ type, core; SPTR: Replicative DNA helicase; TIGRFAM: DNA helicase, DnaB type; replicative DNA helicase 2457490 11055086 Murru_2245 Muricauda ruestringensis DSM 13258 replicative DNA helicase YP_004788706.1 2455943 D 886377 CDS YP_004788707.1 344203564 11055087 2457504..2458781 1 NC_015945.1 KEGG: fbc:FB2170_00040 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2458781 11055087 Murru_2246 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788707.1 2457504 D 886377 CDS YP_004788708.1 344203565 11055088 complement(2458778..2459677) 1 NC_015945.1 hypothetical protein 2459677 11055088 Murru_2247 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788708.1 2458778 R 886377 CDS YP_004788709.1 344203566 11055089 complement(2459787..2460674) 1 NC_015945.1 PFAM: Dienelactone hydrolase family; COGs: COG0412 Dienelactone hydrolase; InterPro IPR002925; KEGG: dfe:Dfer_3354 carboxymethylenebutenolidase; PFAM: Dienelactone hydrolase; PRIAM: Carboxymethylenebutenolidase; SPTR: Dienelactone hydrolase family protein; carboxymethylenebutenolidase 2460674 11055089 Murru_2248 Muricauda ruestringensis DSM 13258 carboxymethylenebutenolidase YP_004788709.1 2459787 R 886377 CDS YP_004788710.1 344203567 11055090 complement(2460762..2461553) 1 NC_015945.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; COGs: COG0561 hydrolase of the HAD superfamily; InterPro IPR000150:IPR006379:IPR013200; KEGG: rbi:RB2501_12382 putative hydrolase of the HAD superfamily protein; PFAM: HAD superfamily hydrolase-like, type 3; PRIAM: Sugar-phosphatase; SPTR: Predicted hydrolase of the HAD superfamily protein; TIGRFAM: Cof protein; HAD-superfamily hydrolase, subfamily IIB; cof family hydrolase 2461553 11055090 Murru_2249 Muricauda ruestringensis DSM 13258 cof family hydrolase YP_004788710.1 2460762 R 886377 CDS YP_004788711.1 344203568 11055091 2461653..2462075 1 NC_015945.1 PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: fbc:FB2170_00030 hypothetical protein; PFAM: Uncharacterised protein family UPF0047; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0047; hypothetical protein 2462075 11055091 Murru_2250 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788711.1 2461653 D 886377 CDS YP_004788712.1 344203569 11055092 complement(2462193..2462537) 1 NC_015945.1 PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20; COGs: COG0292 Ribosomal protein L20; HAMAP: Ribosomal protein L20; InterPro IPR005813; KEGG: fbc:FB2170_00020 50S ribosomal protein L20; PFAM: Ribosomal protein L20; SPTR: 50S ribosomal protein L20; TIGRFAM: Ribosomal protein L20; 50S ribosomal protein L20 2462537 11055092 Murru_2251 Muricauda ruestringensis DSM 13258 50S ribosomal protein L20 YP_004788712.1 2462193 R 886377 CDS YP_004788713.1 344203570 11055093 complement(2462629..2462826) 1 NC_015945.1 PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; HAMAP: Ribosomal protein L35, non-mitochondrial; InterPro IPR001706:IPR021137; KEGG: rbi:RB2501_12397 50S ribosomal protein L35; PFAM: Ribosomal protein L35; SPTR: 50S ribosomal protein L35; TIGRFAM: Ribosomal protein L35, non-mitochondrial; 50S ribosomal protein L35 2462826 11055093 Murru_2252 Muricauda ruestringensis DSM 13258 50S ribosomal protein L35 YP_004788713.1 2462629 R 886377 CDS YP_004788714.1 344203571 11055094 complement(2462875..2463318) 1 NC_015945.1 PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; COGs: COG0290 Translation initiation factor 3 (IF-3); InterPro IPR001288:IPR019814:IPR019815; KEGG: cat:CA2559_00820 translation initiation factor IF-3; PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal; SPTR: Translation initiation factor IF-3; TIGRFAM: Translation initiation factor 3; translation initiation factor IF-3 2463318 11055094 Murru_2253 Muricauda ruestringensis DSM 13258 translation initiation factor IF-3 YP_004788714.1 2462875 R 886377 CDS YP_004788715.1 344203572 11055095 complement(2463463..2465403) 1 NC_015945.1 PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase; COGs: COG0441 Threonyl-tRNA synthetase; InterProIPR012947:IPR002320:IPR004095:IPR002314:IPR 004154; KEGG: fbc:FB2170_00005 threonyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding; SMART: Threonyl/alanyl tRNA synthetase, SAD; SPTR: Threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; threonyl-tRNA synthetase 2465403 11055095 Murru_2254 Muricauda ruestringensis DSM 13258 threonyl-tRNA synthetase YP_004788715.1 2463463 R 886377 CDS YP_004788716.1 344203573 11055101 2471153..2471788 1 NC_015945.1 PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family; COGs: COG1272 membrane protein hemolysin III homolog; InterPro IPR005744:IPR004254; KEGG: rbi:RB2501_16204 putative hemolysin III; PFAM: Hly-III-related; SPTR: Probable hemolysin III; TIGRFAM: HylII; hemolysin III family channel protein 2471788 11055101 Murru_2255 Muricauda ruestringensis DSM 13258 hemolysin III family channel protein YP_004788716.1 2471153 D 886377 CDS YP_004788717.1 344203574 11055102 complement(2471809..2474055) 1 NC_015945.1 KEGG: fbc:FB2170_09026 fibronectin type III domain-containing protein; SPTR: Fibronectin type III domain protein; fibronectin type III domain-containing protein 2474055 11055102 Murru_2256 Muricauda ruestringensis DSM 13258 fibronectin type III domain-containing protein YP_004788717.1 2471809 R 886377 CDS YP_004788718.1 344203575 11055103 complement(2474111..2475868) 1 NC_015945.1 KEGG: fbc:FB2170_09026 fibronectin type III domain-containing protein; SPTR: Fibronectin type III domain protein; fibronectin type III domain-containing protein 2475868 11055103 Murru_2257 Muricauda ruestringensis DSM 13258 fibronectin type III domain-containing protein YP_004788718.1 2474111 R 886377 CDS YP_004788719.1 344203576 11055104 complement(2476011..2476697) 1 NC_015945.1 KEGG: fbc:FB2170_09091 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2476697 11055104 Murru_2258 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788719.1 2476011 R 886377 CDS YP_004788720.1 344203577 11055105 2476754..2477908 1 NC_015945.1 PFAM: Putative RNA methylase family UPF0020; THUMP domain; COGs: COG0116 N6-adenine-specific DNA methylase; InterPro IPR004114:IPR000241; KEGG: fbc:FB2170_09096 putative methylase; PFAM: Putative RNA methylase; THUMP; PRIAM: rRNA (guanine-N(2)-)-methyltransferase; SMART: THUMP; SPTR: Putative methylase; rRNA (guanine-N(2)-)-methyltransferase 2477908 11055105 Murru_2259 Muricauda ruestringensis DSM 13258 rRNA (guanine-N(2)-)-methyltransferase YP_004788720.1 2476754 D 886377 CDS YP_004788721.1 344203578 11055106 2478010..2478546 1 NC_015945.1 hypothetical protein 2478546 11055106 Murru_2260 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788721.1 2478010 D 886377 CDS YP_004788722.1 344203579 11055108 complement(2478934..2479275) 1 NC_015945.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; COGs: COG3324 protein related to lactoylglutathione lyase; InterPro IPR004360; KEGG: rbi:RB2501_11967 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Putative uncharacterized protein; bleomycin resistance protein 2479275 11055108 Murru_2262 Muricauda ruestringensis DSM 13258 bleomycin resistance protein YP_004788722.1 2478934 R 886377 CDS YP_004788723.1 344203580 11055109 complement(2479277..2480032) 1 NC_015945.1 KEGG: fbc:FB2170_09106 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2480032 11055109 Murru_2263 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788723.1 2479277 R 886377 CDS YP_004788724.1 344203581 11055110 complement(2480013..2480531) 1 NC_015945.1 KEGG: fbc:FB2170_09111 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2480531 11055110 Murru_2264 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788724.1 2480013 R 886377 CDS YP_004788725.1 344203582 11055111 complement(2480562..2481974) 1 NC_015945.1 PFAM: tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR001566:IPR010280; KEGG: fbc:FB2170_09116 putative RNA methyltransferase; PFAM: (Uracil-5)-methyltransferase; SPTR: Putative RNA methyltransferase; TIGRFAM: 23S rRNA methyltransferase/RumA; TrmA family RNA methyltransferase 2481974 11055111 Murru_2265 Muricauda ruestringensis DSM 13258 TrmA family RNA methyltransferase YP_004788725.1 2480562 R 886377 CDS YP_004788726.1 344203583 11055112 2482209..2483453 1 NC_015945.1 PFAM: Aminotransferase class-III; TIGRFAM: ornithine aminotransferase; COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR010164:IPR005814; KEGG: fps:FP0739 ornithine--oxo-acid transaminase; PFAM: Aminotransferase class-III; PRIAM: Ornithine aminotransferase; SPTR: Ornithine aminotransferase (Glutamate-1-semialdehyde 2,1-aminomutase); TIGRFAM: Ornithine aminotransferase; ornithine aminotransferase 2483453 11055112 Murru_2266 Muricauda ruestringensis DSM 13258 ornithine aminotransferase YP_004788726.1 2482209 D 886377 CDS YP_004788727.1 344203584 11055113 2483860..2484351 1 NC_015945.1 TIGRFAM: PAS domain S-box; KEGG: zpr:ZPR_4320 thioesterase superfamily protein; SPTR: Multi-sensor Hybrid Histidine Kinase; thioesterase superfamily protein 2484351 11055113 Murru_2267 Muricauda ruestringensis DSM 13258 thioesterase superfamily protein YP_004788727.1 2483860 D 886377 CDS YP_004788728.1 344203585 11055114 2484641..2485240 1 NC_015945.1 PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC; COGs: COG3201 Nicotinamide mononucleotide transporter; InterPro IPR006419; KEGG: cpi:Cpin_0720 nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; SPTR: Putative membrane transporter involved in nicotinamide mononucleotide transport; TIGRFAM: Nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC 2485240 11055114 Murru_2268 Muricauda ruestringensis DSM 13258 nicotinamide mononucleotide transporter PnuC YP_004788728.1 2484641 D 886377 CDS YP_004788729.1 344203586 11055115 2485209..2486225 1 NC_015945.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; KEGG: gym:GYMC10_2928 acyl-CoA dehydrogenase type 2 domain protein; SPTR: Acyl-CoA dehydrogenase-like; hypothetical protein 2486225 11055115 Murru_2269 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788729.1 2485209 D 886377 CDS YP_004788730.1 344203587 11055116 complement(2486385..2488697) 1 NC_015945.1 PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764:IPR002772; KEGG: sli:Slin_1258 glycoside hydrolase family 3 domain protein; PFAM: Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal; PRIAM: Xylan 1,4-beta-xylosidase; SPTR: Periplasmic beta-glucosidase/beta-xylosidase; xylan 1,4-beta-xylosidase 2488697 11055116 Murru_2270 Muricauda ruestringensis DSM 13258 xylan 1,4-beta-xylosidase YP_004788730.1 2486385 R 886377 CDS YP_004788731.1 344203588 11055117 complement(2488785..2489816) 1 NC_015945.1 PFAM: Putative esterase; COGs: COG0627 esterase; InterPro IPR000801; KEGG: lby:Lbys_0275 esterase; PFAM: Putative esterase; SPTR: Esterase; esterase 2489816 11055117 Murru_2271 Muricauda ruestringensis DSM 13258 esterase YP_004788731.1 2488785 R 886377 CDS YP_004788732.1 344203589 11055118 complement(2489827..2490138) 1 NC_015945.1 KEGG: amt:Amet_4242 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2490138 11055118 Murru_2272 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788732.1 2489827 R 886377 CDS YP_004788733.1 344203590 11055119 complement(2490142..2491479) 1 NC_015945.1 PFAM: Protein of unknown function (DUF1446); InterPro IPR010839; KEGG: bpy:Bphyt_4091 protein of unknown function DUF1446; PFAM: Protein of unknown function DUF1446; SPTR: Putative uncharacterized protein; hypothetical protein 2491479 11055119 Murru_2273 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788733.1 2490142 R 886377 CDS YP_004788734.1 344203591 11055120 complement(2491481..2492779) 1 NC_015945.1 PFAM: Citrate transporter; TIGRFAM: citrate transporter, CitMHS family; COGs: COG2851 H+/citrate symporter; InterPro IPR014738:IPR004680; KEGG: rpf:Rpic12D_3734 citrate/H+ symporter, CitMHS family; PFAM: Divalent ion symporter; SPTR: Citrate transporter; TIGRFAM: Citrate transporter; CitMHS family citrate/H+ symporter 2492779 11055120 Murru_2274 Muricauda ruestringensis DSM 13258 CitMHS family citrate/H+ symporter YP_004788734.1 2491481 R 886377 CDS YP_004788735.1 344203592 11055121 complement(2492822..2494333) 1 NC_015945.1 PFAM: Protein of unknown function (DUF1593); InterPro IPR011483; KEGG: rbi:RB2501_13119 hypothetical protein; PFAM: Protein of unknown function DUF1593; SPTR: Putative uncharacterized protein; hypothetical protein 2494333 11055121 Murru_2275 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788735.1 2492822 R 886377 CDS YP_004788736.1 344203593 11055122 complement(2494362..2495729) 1 NC_015945.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: fbc:FB2170_14798 hypothetical protein; PFAM: Oxidoreductase, N-terminal; SPTR: Putative uncharacterized protein; oxidoreductase domain-containing protein 2495729 11055122 Murru_2276 Muricauda ruestringensis DSM 13258 oxidoreductase domain-containing protein YP_004788736.1 2494362 R 886377 CDS YP_004788737.1 344203594 11055123 complement(2495729..2496322) 1 NC_015945.1 TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; InterPro IPR006311; KEGG: fbc:FB2170_10299 hypothetical protein; SPTR: Putative acetate--CoA ligase; hypothetical protein 2496322 11055123 Murru_2277 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788737.1 2495729 R 886377 CDS YP_004788738.1 344203595 11055124 complement(2496325..2498031) 1 NC_015945.1 PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076; KEGG: rbi:RB2501_02785 GMC family oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Oxidoreductase, GMC family protein; FAD dependent oxidoreductase 2498031 11055124 Murru_2278 Muricauda ruestringensis DSM 13258 FAD dependent oxidoreductase YP_004788738.1 2496325 R 886377 CDS YP_004788739.1 344203596 11055125 complement(2498101..2498817) 1 NC_015945.1 PFAM: NUDIX domain; InterPro IPR000086; KEGG: sli:Slin_0652 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: Putative uncharacterized protein; NUDIX hydrolase 2498817 11055125 Murru_2279 Muricauda ruestringensis DSM 13258 NUDIX hydrolase YP_004788739.1 2498101 R 886377 CDS YP_004788740.1 344203597 11055126 2499506..2502709 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: zpr:ZPR_1629 TonB-dependent receptor Plug domain protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative uncharacterized protein; TonB-dependent receptor plug 2502709 11055126 Murru_2280 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004788740.1 2499506 D 886377 CDS YP_004788741.1 344203598 11055127 2502714..2504417 1 NC_015945.1 PFAM: SusD family; InterPro IPR012944; KEGG: zpr:ZPR_3072 putative outer membrane protein; PFAM: RagB/SusD; SPTR: Putative outer membrane protein; RagB/SusD domain-containing protein 2504417 11055127 Murru_2281 Muricauda ruestringensis DSM 13258 RagB/SusD domain-containing protein YP_004788741.1 2502714 D 886377 CDS YP_004788742.1 344203599 11055128 2504636..2508049 1 NC_015945.1 PFAM: ASPIC and UnbV; FG-GAP repeat; InterPro IPR013517:IPR011519; KEGG: dfe:Dfer_4948 ASPIC/UnbV domain protein; PFAM: ASPIC/UnbV; FG-GAP; SPTR: Putative uncharacterized protein; ASPIC/UnbV domain-containing protein 2508049 11055128 Murru_2282 Muricauda ruestringensis DSM 13258 ASPIC/UnbV domain-containing protein YP_004788742.1 2504636 D 886377 CDS YP_004788743.1 344203600 11055129 complement(2508292..2509584) 1 NC_015945.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; COGs: COG2195 Di- and tripeptidase; InterPro IPR002933:IPR011650; KEGG: sli:Slin_3913 peptidase M20; PFAM: Peptidase M20, dimerisation; Peptidase M20; SPTR: Peptidase M20; peptidase dimerization domain-containing protein 2509584 11055129 Murru_2283 Muricauda ruestringensis DSM 13258 peptidase dimerization domain-containing protein YP_004788743.1 2508292 R 886377 CDS YP_004788744.1 344203601 11055130 complement(2509660..2510538) 1 NC_015945.1 PFAM: Aminotransferase class IV; TIGRFAM: D-amino acid aminotransferase; COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: rbi:RB2501_10712 aminotransferase, class IV; PFAM: Aminotransferase, class IV; PRIAM: D-amino-acid transaminase; SPTR: Aminotransferase, class IV; D-amino-acid transaminase 2510538 11055130 Murru_2284 Muricauda ruestringensis DSM 13258 D-amino-acid transaminase YP_004788744.1 2509660 R 886377 CDS YP_004788745.1 344203602 11055131 2511059..2511580 1 NC_015945.1 PFAM: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); COGs: COG4502 conserved hypothetical protein; InterPro IPR010708; KEGG: rbi:RB2501_10642 5'(3')-deoxyribonucleotidase; SPTR: 5'(3')-deoxyribonucleotidase; 5'(3')-deoxyribonucleotidase 2511580 11055131 Murru_2285 Muricauda ruestringensis DSM 13258 5'(3')-deoxyribonucleotidase YP_004788745.1 2511059 D 886377 CDS YP_004788746.1 344203603 11055132 2511593..2512315 1 NC_015945.1 PFAM: Phospholipase/Carboxylesterase; COGs: COG4099 peptidase; KEGG: fbc:FB2170_09811 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2512315 11055132 Murru_2286 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788746.1 2511593 D 886377 CDS YP_004788747.1 344203604 11055133 2512321..2513043 1 NC_015945.1 PFAM: D-ala-D-ala dipeptidase; COGs: COG2173 D-alanyl-D-alanine dipeptidase; InterPro IPR000755; KEGG: fbc:FB2170_14738 putative peptidase; PFAM: Peptidase M15D, VanX D-ala-D-ala dipeptidase; SPTR: Probable peptidase; peptidase M15D vanX D-ala-D-ala dipeptidase 2513043 11055133 Murru_2287 Muricauda ruestringensis DSM 13258 peptidase M15D vanX D-ala-D-ala dipeptidase YP_004788747.1 2512321 D 886377 CDS YP_004788748.1 344203605 11055134 complement(2513040..2514218) 1 NC_015945.1 KEGG: fbc:FB2170_09831 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2514218 11055134 Murru_2288 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788748.1 2513040 R 886377 CDS YP_004788749.1 344203606 11055135 complement(2514226..2515326) 1 NC_015945.1 PFAM: Domain of unknown function DUF20; COGs: COG0628 permease; InterPro IPR002549; KEGG: rbi:RB2501_13204 hypothetical protein; PFAM: Uncharacterised protein family UPF0118; SPTR: Putative uncharacterized protein; hypothetical protein 2515326 11055135 Murru_2289 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788749.1 2514226 R 886377 CDS YP_004788750.1 344203607 11055136 complement(2515330..2515926) 1 NC_015945.1 KEGG: fbc:FB2170_09841 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2515926 11055136 Murru_2290 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788750.1 2515330 R 886377 CDS YP_004788751.1 344203608 11055137 complement(2516047..2516754) 1 NC_015945.1 PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; COGs: COG1385 conserved hypothetical protein; InterPro IPR006700; KEGG: fbc:FB2170_09846 hypothetical protein; PFAM: Ribosomal RNA small subunit methyltransferase E; SPTR: Putative uncharacterized protein; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; ribosomal RNA small subunit methyltransferase E 2516754 11055137 Murru_2291 Muricauda ruestringensis DSM 13258 ribosomal RNA small subunit methyltransferase E YP_004788751.1 2516047 R 886377 CDS YP_004788752.1 344203609 11055138 complement(2516892..2517920) 1 NC_015945.1 PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family; COGs: COG0533 Metal-dependent protease with possible chaperone activity; HAMAP: Peptidase M22, O-sialoglycoprotein peptidase; InterPro IPR022450:IPR017861:IPR000905; KEGG: fbc:FB2170_09856 putative glycoprotease; PFAM: Peptidase M22, glycoprotease; PRIAM: O-sialoglycoprotein endopeptidase; SPTR: Probable O-sialoglycoprotein endopeptidase; TIGRFAM: Peptidase M22, O-sialoglycoprotein peptidase; Peptidase M22, glycoprotease, subgroup; O-sialoglycoprotein endopeptidase 2517920 11055138 Murru_2292 Muricauda ruestringensis DSM 13258 O-sialoglycoprotein endopeptidase YP_004788752.1 2516892 R 886377 CDS YP_004788753.1 344203610 11055139 2517993..2522444 1 NC_015945.1 PFAM: Family of unknown function (DUF490); InterPro IPR007452; KEGG: fbc:FB2170_09861 hypothetical protein; PFAM: Protein of unknown function DUF490; SPTR: Putative uncharacterized protein; hypothetical protein 2522444 11055139 Murru_2293 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788753.1 2517993 D 886377 CDS YP_004788754.1 344203611 11055140 2522589..2523575 1 NC_015945.1 PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase; COGs: COG0205 6-phosphofructokinase; HAMAP: Phosphofructokinase; InterPro IPR012828:IPR022953:IPR000023; KEGG: fbc:FB2170_09866 6-phosphofructokinase; PFAM: Phosphofructokinase domain; PRIAM: 6-phosphofructokinase; SPTR: 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; 6-phosphofructokinase 2523575 11055140 Murru_2294 Muricauda ruestringensis DSM 13258 6-phosphofructokinase YP_004788754.1 2522589 D 886377 CDS YP_004788755.1 344203612 11055141 2523598..2524599 1 NC_015945.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR020828:IPR006424:IPR020829; KEGG: fbc:FB2170_09871 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; SPTR: Glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase 2524599 11055141 Murru_2295 Muricauda ruestringensis DSM 13258 glyceraldehyde-3-phosphate dehydrogenase YP_004788755.1 2523598 D 886377 CDS YP_004788756.1 344203613 11055142 2524674..2525525 1 NC_015945.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family; COGs: COG2971 N-acetylglucosamine kinase; KEGG: fbc:FB2170_09876 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2525525 11055142 Murru_2296 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788756.1 2524674 D 886377 CDS YP_004788757.1 344203614 11055143 complement(2525518..2525898) 1 NC_015945.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006056:IPR006175; KEGG: rbi:RB2501_13249 hypothetical protein; PFAM: Endoribonuclease L-PSP; SPTR: Putative uncharacterized protein; TIGRFAM: YjgF-like protein; endoribonuclease L-PSP 2525898 11055143 Murru_2297 Muricauda ruestringensis DSM 13258 endoribonuclease L-PSP YP_004788757.1 2525518 R 886377 CDS YP_004788758.1 344203615 11055144 complement(2525946..2528639) 1 NC_015945.1 COGs: COG1452 Organic solvent tolerance protein OstA; KEGG: fbc:FB2170_09886 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2528639 11055144 Murru_2298 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788758.1 2525946 R 886377 CDS YP_004788759.1 344203616 11055145 2528770..2529960 1 NC_015945.1 PFAM: N-acetylmuramoyl-L-alanine amidase; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: rbi:RB2501_13259 putative N-acetylmuramoyl-L-alanine amidase AmiA; PFAM: Cell wall hydrolase/autolysin, catalytic; PRIAM: N-acetylmuramoyl-L-alanine amidase; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: Putative N-acetylmuramoyl-L-alanine amidase amiA; N-acetylmuramoyl-L-alanine amidase 2529960 11055145 Murru_2299 Muricauda ruestringensis DSM 13258 N-acetylmuramoyl-L-alanine amidase YP_004788759.1 2528770 D 886377 CDS YP_004788760.1 344203617 11055146 2530026..2531012 1 NC_015945.1 PFAM: mce related protein; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: fbc:FB2170_09896 hypothetical protein; PFAM: Mammalian cell entry-related; SPTR: Putative uncharacterized protein; mammalian cell entry domain-containing protein 2531012 11055146 Murru_2300 Muricauda ruestringensis DSM 13258 mammalian cell entry domain-containing protein YP_004788760.1 2530026 D 886377 CDS YP_004788761.1 344203618 11055147 2531013..2532338 1 NC_015945.1 COGs: COG0247 Fe-S oxidoreductase; KEGG: fbc:FB2170_09901 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2532338 11055147 Murru_2301 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788761.1 2531013 D 886377 CDS YP_004788762.1 344203619 11055148 2532349..2533140 1 NC_015945.1 PFAM: Cysteine-rich domain; COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017; KEGG: gfo:GFO_1636 cysteine-rich domain-containing protein; PFAM: Cysteine-rich domain; SPTR: Fe-S oxidoreductase, possible dehydrogenase subunit; hypothetical protein 2533140 11055148 Murru_2302 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788762.1 2532349 D 886377 CDS YP_004788763.1 344203620 11055149 2533198..2533680 1 NC_015945.1 KEGG: fbc:FB2170_09911 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2533680 11055149 Murru_2303 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788763.1 2533198 D 886377 CDS YP_004788764.1 344203621 11055150 2533880..2536792 1 NC_015945.1 PFAM: Glycosyl hydrolase family 3 N terminal domain; Beta-lactamase; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764:IPR001466; KEGG: fbc:FB2170_09916 beta-N-acetylglucosaminidase; PFAM: Glycoside hydrolase, family 3, N-terminal; Beta-lactamase-related; PRIAM: Beta-N-acetylhexosaminidase; SPTR: Beta-N-acetylglucosaminidase; beta-N-acetylhexosaminidase 2536792 11055150 Murru_2304 Muricauda ruestringensis DSM 13258 beta-N-acetylhexosaminidase YP_004788764.1 2533880 D 886377 CDS YP_004788765.1 344203622 11055151 2536822..2537964 1 NC_015945.1 PFAM: Glycosyl transferases group 1; TIGRFAM: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: fbc:FB2170_09921 group 1 family glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase group 1; group 1 glycosyl transferase 2537964 11055151 Murru_2305 Muricauda ruestringensis DSM 13258 group 1 glycosyl transferase YP_004788765.1 2536822 D 886377 CDS YP_004788766.1 344203623 11055152 2538060..2538428 1 NC_015945.1 KEGG: fbc:FB2170_09926 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2538428 11055152 Murru_2306 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788766.1 2538060 D 886377 CDS YP_004788767.1 344203624 11055153 2538569..2539726 1 NC_015945.1 PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: fbc:FB2170_09931 OmpA/MotB family outer membrane protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: Outer membrane protein, OmpA/MotB family; OmpA/MotB domain-containing protein 2539726 11055153 Murru_2307 Muricauda ruestringensis DSM 13258 OmpA/MotB domain-containing protein YP_004788767.1 2538569 D 886377 CDS YP_004788768.1 344203625 11055154 2539790..2540236 1 NC_015945.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: coc:Coch_0731 transcriptional regulator, BadM/Rrf2 family; PFAM: Transcription regulator Rrf2; SPTR: Rrf2 family protein; TIGRFAM: Transcription regulator Rrf2; BadM/Rrf2 family transcriptional regulator 2540236 11055154 Murru_2308 Muricauda ruestringensis DSM 13258 BadM/Rrf2 family transcriptional regulator YP_004788768.1 2539790 D 886377 CDS YP_004788769.1 344203626 11055155 2540499..2545289 1 NC_015945.1 PFAM: Di-glucose binding within endoplasmic reticulum; PKD domain; COGs: COG3291 FOG: PKD repeat; InterPro IPR022409:IPR000601; KEGG: fbc:FB2170_12586 hypothetical protein; PFAM: PKD domain; SMART: PKD/Chitinase domain; SPTR: Putative uncharacterized protein; PKD domain-containing protein 2545289 11055155 Murru_2309 Muricauda ruestringensis DSM 13258 PKD domain-containing protein YP_004788769.1 2540499 D 886377 CDS YP_004788770.1 344203627 11055156 2545305..2546981 1 NC_015945.1 TIGRFAM: conserved hypothetical protein, HNE_0200 family; KEGG: fbc:FB2170_12591 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2546981 11055156 Murru_2310 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788770.1 2545305 D 886377 CDS YP_004788771.1 344203628 11055157 complement(2547202..2547609) 1 NC_015945.1 PFAM: Cytochrome c; KEGG: fbc:FB2170_12596 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2547609 11055157 Murru_2311 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788771.1 2547202 R 886377 CDS YP_004788772.1 344203629 11055158 complement(2547698..2548567) 1 NC_015945.1 KEGG: fbc:FB2170_12601 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2548567 11055158 Murru_2312 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788772.1 2547698 R 886377 CDS YP_004788773.1 344203630 11055159 complement(2548570..2548953) 1 NC_015945.1 KEGG: fbc:FB2170_12606 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2548953 11055159 Murru_2313 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788773.1 2548570 R 886377 CDS YP_004788774.1 344203631 11055160 complement(2549150..2550301) 1 NC_015945.1 PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: fbc:FB2170_09956 WlaE protein; PFAM: Glycosyl transferase, group 1; SPTR: Wlae protein; group 1 glycosyl transferase 2550301 11055160 Murru_2314 Muricauda ruestringensis DSM 13258 group 1 glycosyl transferase YP_004788774.1 2549150 R 886377 CDS YP_004788775.1 344203632 11055161 complement(2550379..2551449) 1 NC_015945.1 KEGG: fbc:FB2170_09986 putative hexapeptide transferase family protein; SPTR: Putative hexapeptide transferase family protein; putative hexapeptide transferase family protein 2551449 11055161 Murru_2315 Muricauda ruestringensis DSM 13258 putative hexapeptide transferase family protein YP_004788775.1 2550379 R 886377 CDS YP_004788776.1 344203633 11055162 complement(2551550..2552479) 1 NC_015945.1 KEGG: fbc:FB2170_09966 hypothetical protein; SPTR: Glycosyltransferase; hypothetical protein 2552479 11055162 Murru_2316 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788776.1 2551550 R 886377 CDS YP_004788777.1 344203634 11055163 complement(2552543..2553661) 1 NC_015945.1 PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: fbc:FB2170_09961 lipopolysaccharide biosynthesis; PFAM: Glycosyl transferase, group 1; SPTR: Lipopolysaccharide biosynthesis; group 1 glycosyl transferase 2553661 11055163 Murru_2317 Muricauda ruestringensis DSM 13258 group 1 glycosyl transferase YP_004788777.1 2552543 R 886377 CDS YP_004788778.1 344203635 11055164 complement(2553757..2555118) 1 NC_015945.1 PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN; COGs: COG0728 membrane protein putative virulence factor; InterPro IPR004268; KEGG: rbi:RB2501_13404 virulence factor MviN-like protein; PFAM: Flagellin assembly, membrane protein MviN; SPTR: Virulence factor MVIN-like protein; virulence factor MVIN family protein 2555118 11055164 Murru_2318 Muricauda ruestringensis DSM 13258 virulence factor MVIN family protein YP_004788778.1 2553757 R 886377 CDS YP_004788779.1 344203636 11055165 complement(2555127..2556317) 1 NC_015945.1 PFAM: O-Antigen ligase; InterPro IPR007016; KEGG: fbc:FB2170_09971 hypothetical protein; PFAM: O-antigen ligase-related; SPTR: Putative uncharacterized protein; O-antigen polymerase 2556317 11055165 Murru_2319 Muricauda ruestringensis DSM 13258 O-antigen polymerase YP_004788779.1 2555127 R 886377 CDS YP_004788780.1 344203637 11055166 complement(2556317..2557387) 1 NC_015945.1 PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: rbi:RB2501_13414 WlaC protein; PFAM: Glycosyl transferase, group 1; SPTR: Wlac protein; group 1 glycosyl transferase 2557387 11055166 Murru_2320 Muricauda ruestringensis DSM 13258 group 1 glycosyl transferase YP_004788780.1 2556317 R 886377 CDS YP_004788781.1 344203638 11055167 complement(2557390..2558337) 1 NC_015945.1 KEGG: fbc:FB2170_09996 glycosyltransferase; SPTR: Glycosyltransferase; glycosyltransferase 2558337 11055167 Murru_2321 Muricauda ruestringensis DSM 13258 glycosyltransferase YP_004788781.1 2557390 R 886377 CDS YP_004788782.1 344203639 11055168 complement(2558464..2560212) 1 NC_015945.1 KEGG: fbc:FB2170_10001 pectate lyase; SPTR: Pectate lyase; pectate lyase 2560212 11055168 Murru_2322 Muricauda ruestringensis DSM 13258 pectate lyase YP_004788782.1 2558464 R 886377 CDS YP_004788783.1 344203640 11055169 complement(2561121..2562146) 1 NC_015945.1 PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: fbc:FB2170_10021 putative UDP-glucuronic acid epimerase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: UDP-glucuronate 4-epimerase; SPTR: Putative UDP-glucuronic acid epimerase; UDP-glucuronate 4-epimerase 2562146 11055169 Murru_2323 Muricauda ruestringensis DSM 13258 UDP-glucuronate 4-epimerase YP_004788783.1 2561121 R 886377 CDS YP_004788784.1 344203641 11055170 complement(2562180..2563292) 1 NC_015945.1 PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sta:STHERM_c15680 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1 family; group 1 glycosyl transferase 2563292 11055170 Murru_2324 Muricauda ruestringensis DSM 13258 group 1 glycosyl transferase YP_004788784.1 2562180 R 886377 CDS YP_004788785.1 344203642 11055171 complement(2563377..2564780) 1 NC_015945.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR017476:IPR001732:IPR014026:IPR014027; KEGG: fbc:FB2170_10026 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: UDP-glucose 6-dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase 2564780 11055171 Murru_2325 Muricauda ruestringensis DSM 13258 nucleotide sugar dehydrogenase YP_004788785.1 2563377 R 886377 CDS YP_004788786.1 344203643 11055172 2565310..2566083 1 NC_015945.1 PFAM: Polysaccharide biosynthesis/export protein; SLBB domain; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715:IPR019554; KEGG: fbc:FB2170_10041 BexD/CtrA/VexA family polysaccharide export protein; PFAM: Polysaccharide export protein; Soluble ligand binding domain; SPTR: Polysaccharide export protein, BexD/CtrA/VexA family; polysaccharide export protein 2566083 11055172 Murru_2326 Muricauda ruestringensis DSM 13258 polysaccharide export protein YP_004788786.1 2565310 D 886377 CDS YP_004788787.1 344203644 11055173 2566114..2568501 1 NC_015945.1 PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702:IPR003856; KEGG: rbi:RB2501_13484 tyrosine-protein kinase; PFAM: Lipopolysaccharide biosynthesis; SPTR: Tyrosine-protein kinase; TIGRFAM: Exopolysaccharide synthesis protein; capsular exopolysaccharide family protein 2568501 11055173 Murru_2327 Muricauda ruestringensis DSM 13258 capsular exopolysaccharide family protein YP_004788787.1 2566114 D 886377 CDS YP_004788788.1 344203645 11055174 2568583..2569446 1 NC_015945.1 PFAM: Core-2/I-Branching enzyme; InterPro IPR003406; KEGG: ele:Elen_2434 glycosyl transferase family 14; PFAM: Glycosyl transferase, family 14; SPTR: Putative uncharacterized protein; glycosyl transferase family protein 2569446 11055174 Murru_2328 Muricauda ruestringensis DSM 13258 glycosyl transferase family protein YP_004788788.1 2568583 D 886377 CDS YP_004788789.1 344203646 11055175 2569813..2579076 1 NC_015945.1 PFAM: Kelch motif; Di-glucose binding within endoplasmic reticulum; PKD domain; Putative Ig domain; COGs: COG3291 FOG: PKD repeat; InterPro IPR006652:IPR022409:IPR008009:IPR000601; KEGG: rbi:RB2501_13489 putative secreted protein; PFAM: PKD domain; Putative Ig; Kelch repeat type 1; SMART: PKD/Chitinase domain; Kelch repeat type 1; SPTR: Putative secreted protein; PKD domain-containing protein 2579076 11055175 Murru_2329 Muricauda ruestringensis DSM 13258 PKD domain-containing protein YP_004788789.1 2569813 D 886377 CDS YP_004788790.1 344203647 11055176 complement(2579414..2580784) 1 NC_015945.1 PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017475:IPR003362; KEGG: fps:FP1244 glycosyl transferase; PFAM: Bacterial sugar transferase; SPTR: Probable glycosyl transferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 2580784 11055176 Murru_2330 Muricauda ruestringensis DSM 13258 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase YP_004788790.1 2579414 R 886377 CDS YP_004788791.1 344203648 11055177 2580985..2581887 1 NC_015945.1 KEGG: fbc:FB2170_10036 putative capsular polysaccharide biosynthesis protein; SPTR: Putative capsular polysaccharide biosynthesis protein; hypothetical protein 2581887 11055177 Murru_2331 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788791.1 2580985 D 886377 CDS YP_004788792.1 344203649 11055178 2582449..2589639 1 NC_015945.1 PFAM: Kelch motif; Di-glucose binding within endoplasmic reticulum; PKD domain; Putative Ig domain; COGs: COG3291 FOG: PKD repeat; InterPro IPR006652:IPR022409:IPR008009:IPR000601; KEGG: rbi:RB2501_13489 putative secreted protein; PFAM: PKD domain; Putative Ig; Kelch repeat type 1; SMART: PKD/Chitinase domain; Kelch repeat type 1; SPTR: Putative secreted protein; PKD domain-containing protein 2589639 11055178 Murru_2332 Muricauda ruestringensis DSM 13258 PKD domain-containing protein YP_004788792.1 2582449 D 886377 CDS YP_004788793.1 344203650 11055179 complement(2589906..2590649) 1 NC_015945.1 COGs: COG4464 Capsular polysaccharide biosynthesis protein; KEGG: fbc:FB2170_10121 capsular polysaccharide biosynthesis protein; SPTR: Capsular polysaccharide biosynthesis protein, putative; capsular polysaccharide biosynthesis protein 2590649 11055179 Murru_2333 Muricauda ruestringensis DSM 13258 capsular polysaccharide biosynthesis protein YP_004788793.1 2589906 R 886377 CDS YP_004788794.1 344203651 11055180 2590911..2592182 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: rbi:RB2501_02365 two-component system sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Two-component system sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 2592182 11055180 Murru_2334 Muricauda ruestringensis DSM 13258 integral membrane sensor signal transduction histidine kinase YP_004788794.1 2590911 D 886377 CDS YP_004788795.1 344203652 11055181 2592175..2592876 1 NC_015945.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: rbi:RB2501_02360 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SPTR: Two-component system, transcriptional regulatory protein; two component winged helix family transcriptional regulator 2592876 11055181 Murru_2335 Muricauda ruestringensis DSM 13258 two component winged helix family transcriptional regulator YP_004788795.1 2592175 D 886377 CDS YP_004788796.1 344203653 11055182 2593241..2594005 1 NC_015945.1 KEGG: gfo:GFO_2193 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2594005 11055182 Murru_2336 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788796.1 2593241 D 886377 CDS YP_004788797.1 344203654 11055183 2594090..2596645 1 NC_015945.1 PFAM: Peptidase family M1; Domain of unknown function (DUF3358); COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: fjo:Fjoh_1348 peptidase M1, membrane alanine aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; PRIAM: Leucyl aminopeptidase; SPTR: Putative aminopeptidase; leucyl aminopeptidase 2596645 11055183 Murru_2337 Muricauda ruestringensis DSM 13258 leucyl aminopeptidase YP_004788797.1 2594090 D 886377 CDS YP_004788798.1 344203655 11055184 2596793..2597473 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 2597473 11055184 Murru_2338 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788798.1 2596793 D 886377 CDS YP_004788799.1 344203656 11055185 2597542..2598450 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 2598450 11055185 Murru_2339 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788799.1 2597542 D 886377 CDS YP_004788800.1 344203657 11055186 complement(2598872..2599246) 1 NC_015945.1 PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; KEGG: lby:Lbys_0800 transcription regulator; SPTR: Probable transcription regulator; transcriptional regulator 2599246 11055186 Murru_2340 Muricauda ruestringensis DSM 13258 transcriptional regulator YP_004788800.1 2598872 R 886377 CDS YP_004788801.1 344203658 11055187 2599326..2600234 1 NC_015945.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG0492 Thioredoxin reductase; InterPro IPR013027; KEGG: zpr:ZPR_2200 alkyl hydroperoxide reductase, F52a subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Alkyl hydroperoxide reductase, F52a subunit; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2600234 11055187 Murru_2341 Muricauda ruestringensis DSM 13258 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_004788801.1 2599326 D 886377 CDS YP_004788802.1 344203659 11055188 2600244..2600630 1 NC_015945.1 PFAM: MerC mercury resistance protein; KEGG: cpi:Cpin_2905 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2600630 11055188 Murru_2342 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788802.1 2600244 D 886377 CDS YP_004788803.1 344203660 11055189 complement(2600734..2601195) 1 NC_015945.1 hypothetical protein 2601195 11055189 Murru_2343 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788803.1 2600734 R 886377 CDS YP_004788804.1 344203661 11055190 complement(2601267..2601668) 1 NC_015945.1 hypothetical protein 2601668 11055190 Murru_2344 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788804.1 2601267 R 886377 CDS YP_004788805.1 344203662 11055191 complement(2601776..2602852) 1 NC_015945.1 PFAM: Trypsin; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001254; KEGG: bth:BT_0765 putative protease; PFAM: Peptidase S1/S6, chymotrypsin/Hap; SPTR: Putative protease; peptidase S1 and S6 chymotrypsin/Hap 2602852 11055191 Murru_2345 Muricauda ruestringensis DSM 13258 peptidase S1 and S6 chymotrypsin/Hap YP_004788805.1 2601776 R 886377 CDS YP_004788806.1 344203663 11055192 complement(2602870..2604042) 1 NC_015945.1 KEGG: bth:BT_0764 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2604042 11055192 Murru_2346 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788806.1 2602870 R 886377 CDS YP_004788807.1 344203664 11055193 complement(2604212..2605279) 1 NC_015945.1 PFAM: TAT (twin-arginine translocation) pathway signal sequence; LD-carboxypeptidase; COGs: COG1619 conserved hypothetical protein; InterPro IPR019546:IPR003507; KEGG: pat:Patl_4176 peptidase U61, LD-carboxypeptidase A; PFAM: Peptidase S66, LD-carboxypeptidase A; Twin-arginine translocation pathway, signal sequence, bacterial/archaeal; SPTR: Peptidase U61 LD-carboxypeptidase A; peptidase U61 LD-carboxypeptidase A 2605279 11055193 Murru_2347 Muricauda ruestringensis DSM 13258 peptidase U61 LD-carboxypeptidase A YP_004788807.1 2604212 R 886377 CDS YP_004788808.1 344203665 11055194 complement(2605416..2606735) 1 NC_015945.1 KEGG: fbc:FB2170_00540 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2606735 11055194 Murru_2348 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788808.1 2605416 R 886377 CDS YP_004788809.1 344203666 11055195 complement(2606850..2609297) 1 NC_015945.1 PFAM: Zinc carboxypeptidase; InterPro IPR000834; KEGG: fbc:FB2170_15896 zinc-dependent carboxypeptidase domain-conatining protein; PFAM: Peptidase M14, carboxypeptidase A; SMART: Peptidase M14, carboxypeptidase A; SPTR: Secreted protein containing N-terminal zinc-dependent carboxypeptidase related domain, putative; peptidase M14 carboxypeptidase A 2609297 11055195 Murru_2349 Muricauda ruestringensis DSM 13258 peptidase M14 carboxypeptidase A YP_004788809.1 2606850 R 886377 CDS YP_004788810.1 344203667 11055196 2609457..2611061 1 NC_015945.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2317); TIGRFAM: bacillithiol biosynthesis cysteine-adding enzyme BshC; COGs: COG4365 conserved hypothetical protein; HAMAP: Uncharacterised protein family UPF0747; InterPro IPR011199; KEGG: fbc:FB2170_15891 hypothetical protein; PFAM: Uncharacterised protein family UPF0747; SPTR: UPF0747 protein FB2170_15891; hypothetical protein 2611061 11055196 Murru_2350 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788810.1 2609457 D 886377 CDS YP_004788811.1 344203668 11055197 complement(2611282..2611941) 1 NC_015945.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR010972:IPR010976:IPR006402:IPR005834; KEGG: hor:Hore_00430 beta-phosphoglucomutase; PFAM: Haloacid dehalogenase-like hydrolase; PRIAM: Beta-phosphoglucomutase; SPTR: Beta-phosphoglucomutase; TIGRFAM: Beta-phosphoglucomutase; Beta-phosphoglucomutase hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; beta-phosphoglucomutase 2611941 11055197 Murru_2351 Muricauda ruestringensis DSM 13258 beta-phosphoglucomutase YP_004788811.1 2611282 R 886377 CDS YP_004788812.1 344203669 11055198 2612149..2613681 1 NC_015945.1 PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; COGs: COG0519 GMP synthase PP-ATPase domain/subunit; HAMAP: GMP synthase; InterProIPR004739:IPR001674:IPR022955:IPR000991:IPR 004506; KEGG: fbc:FB2170_15866 bifunctional GMP synthase/glutamine amidotransferase protein; PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA-specific 2-thiouridylase; PRIAM: GMP synthase (glutamine-hydrolyzing); SPTR: GMP synthase [glutamine-hydrolyzing]; TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; GMP synthase 2613681 11055198 Murru_2352 Muricauda ruestringensis DSM 13258 GMP synthase YP_004788812.1 2612149 D 886377 CDS YP_004788813.1 344203670 11055199 2613678..2615864 1 NC_015945.1 PFAM: Receptor family ligand binding region; LysM domain; InterPro IPR002482:IPR018392; KEGG: fbc:FB2170_15861 LysM-repeat-containing protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: LysM-repeat protein; peptidoglycan-binding lysin domain-containing protein 2615864 11055199 Murru_2353 Muricauda ruestringensis DSM 13258 peptidoglycan-binding lysin domain-containing protein YP_004788813.1 2613678 D 886377 CDS YP_004788814.1 344203671 11055200 2615842..2616246 1 NC_015945.1 PFAM: OsmC-like protein; COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: cat:CA2559_00995 hypothetical protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: Putative uncharacterized protein; OsmC family protein 2616246 11055200 Murru_2354 Muricauda ruestringensis DSM 13258 OsmC family protein YP_004788814.1 2615842 D 886377 CDS YP_004788815.1 344203672 11055201 2616234..2616767 1 NC_015945.1 KEGG: fbc:FB2170_15856 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2616767 11055201 Murru_2355 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788815.1 2616234 D 886377 CDS YP_004788816.1 344203673 11055202 2616885..2617079 1 NC_015945.1 hypothetical protein 2617079 11055202 Murru_2356 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788816.1 2616885 D 886377 CDS YP_004788817.1 344203674 11055203 complement(2617130..2617615) 1 NC_015945.1 hypothetical protein 2617615 11055203 Murru_2357 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788817.1 2617130 R 886377 CDS YP_004788818.1 344203675 11055204 complement(2617612..2618475) 1 NC_015945.1 PFAM: Xylose isomerase-like TIM barrel; COGs: COG3622 Hydroxypyruvate isomerase; InterPro IPR006311:IPR012307; KEGG: fbc:FB2170_15851 hypothetical protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Putative uncharacterized protein; xylose isomerase domain-containing protein 2618475 11055204 Murru_2358 Muricauda ruestringensis DSM 13258 xylose isomerase domain-containing protein YP_004788818.1 2617612 R 886377 CDS YP_004788819.1 344203676 11055205 2618519..2618761 1 NC_015945.1 COGs: COG3530 conserved hypothetical protein; KEGG: fbc:FB2170_15846 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 2618761 11055205 Murru_2359 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788819.1 2618519 D 886377 CDS YP_004788820.1 344203677 11055206 2618811..2620445 1 NC_015945.1 PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase; COGs: COG0504 CTP synthase (UTP-ammonia lyase); HAMAP: CTP synthase; InterPro IPR004468:IPR017456:IPR000991; KEGG: fbc:FB2170_15841 CTP synthetase; PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; PRIAM: CTP synthase; SPTR: CTP synthase; TIGRFAM: CTP synthase; CTP synthase 2620445 11055206 Murru_2360 Muricauda ruestringensis DSM 13258 CTP synthase YP_004788820.1 2618811 D 886377 CDS YP_004788821.1 344203678 11055207 2620512..2622380 1 NC_015945.1 PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain; COGs: COG0706 Preprotein translocase subunit YidC; HAMAP: Membrane insertion protein, OxaA/YidC, bacterial; InterPro IPR019998:IPR001708; KEGG: fbc:FB2170_15836 putative inner membrane protein translocase component YidC; PFAM: Membrane insertion protein, OxaA/YidC; SPTR: Membrane protein oxaA; TIGRFAM: Membrane insertion protein, OxaA/YidC; Membrane insertion protein, OxaA/YidC, bacterial; membrane protein OxaA 2622380 11055207 Murru_2361 Muricauda ruestringensis DSM 13258 membrane protein OxaA YP_004788821.1 2620512 D 886377 CDS YP_004788822.1 344203679 11055208 complement(2622656..2624524) 1 NC_015945.1 PFAM: Fasciclin domain; COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: fbc:FB2170_07619 putative adhesion lipoprotein; PFAM: FAS1 domain; SMART: FAS1 domain; SPTR: Putative adhesion lipoprotein; beta-Ig-H3/fasciclin 2624524 11055208 Murru_2362 Muricauda ruestringensis DSM 13258 beta-Ig-H3/fasciclin YP_004788822.1 2622656 R 886377 CDS YP_004788823.1 344203680 11055209 2624727..2625917 1 NC_015945.1 PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; HAMAP: tRNA-specific 2-thiouridylase; InterPro IPR004506; KEGG: fbc:FB2170_15813 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA-specific 2-thiouridylase; SPTR: tRNA-specific 2-thiouridylase mnmA; TIGRFAM: tRNA-specific 2-thiouridylase; tRNA-specific 2-thiouridylase mnmA 2625917 11055209 Murru_2363 Muricauda ruestringensis DSM 13258 tRNA-specific 2-thiouridylase mnmA YP_004788823.1 2624727 D 886377 CDS YP_004788824.1 344203681 11055210 2625972..2626913 1 NC_015945.1 PFAM: 2-nitropropane dioxygenase; COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136; KEGG: fbc:FB2170_15808 putative dioxygenase; PFAM: 2-nitropropane dioxygenase, NPD; SPTR: Putative dioxygenase; 2-nitropropane dioxygenase 2626913 11055210 Murru_2364 Muricauda ruestringensis DSM 13258 2-nitropropane dioxygenase YP_004788824.1 2625972 D 886377 CDS YP_004788825.1 344203682 11055211 2626963..2627436 1 NC_015945.1 KEGG: rbi:RB2501_04460 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2627436 11055211 Murru_2365 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788825.1 2626963 D 886377 CDS YP_004788826.1 344203683 11055212 complement(2627484..2628815) 1 NC_015945.1 PFAM: Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: fbc:FB2170_15553 putative transmembrane protein; PFAM: Domain of unknown function DUF58; SPTR: Putative transmembrane protein; hypothetical protein 2628815 11055212 Murru_2366 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788826.1 2627484 R 886377 CDS YP_004788827.1 344203684 11055213 complement(2628818..2629801) 1 NC_015945.1 PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0714 MoxR-like ATPase; InterPro IPR011703; KEGG: fbc:FB2170_15548 magnesium chelatase subunit I; PFAM: ATPase, AAA-3; SPTR: Magnesium chelatase subunit I; ATPase 2629801 11055213 Murru_2367 Muricauda ruestringensis DSM 13258 ATPase YP_004788827.1 2628818 R 886377 CDS YP_004788828.1 344203685 11055214 complement(2629791..2631005) 1 NC_015945.1 KEGG: fbc:FB2170_15543 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2631005 11055214 Murru_2368 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788828.1 2629791 R 886377 CDS YP_004788829.1 344203686 11055215 complement(2630998..2631729) 1 NC_015945.1 KEGG: fbc:FB2170_15538 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2631729 11055215 Murru_2369 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788829.1 2630998 R 886377 CDS YP_004788830.1 344203687 11055216 complement(2631730..2632623) 1 NC_015945.1 KEGG: fbc:FB2170_15533 hypothetical protein; SPTR: Hypothetical membrane spanning protein; hypothetical protein 2632623 11055216 Murru_2370 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788830.1 2631730 R 886377 CDS YP_004788831.1 344203688 11055217 complement(2632607..2633578) 1 NC_015945.1 PFAM: Integral membrane protein DUF95; COGs: COG1300 membrane protein; InterPro IPR002798; KEGG: fbc:FB2170_15528 hypothetical protein; PFAM: Protein of unknown function DUF95, transmembrane; SPTR: Putative uncharacterized protein; hypothetical protein 2633578 11055217 Murru_2371 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788831.1 2632607 R 886377 CDS YP_004788832.1 344203689 11055218 2633614..2634330 1 NC_015945.1 PFAM: RDD family; COGs: COG1714 membrane protein/domain; InterPro IPR010432; KEGG: fbc:FB2170_15523 putative transmembrane protein; PFAM: RDD; SPTR: Putative transmembrane protein; RDD domain-containing protein 2634330 11055218 Murru_2372 Muricauda ruestringensis DSM 13258 RDD domain-containing protein YP_004788832.1 2633614 D 886377 CDS YP_004788833.1 344203690 11055219 2634333..2634947 1 NC_015945.1 PFAM: UPF0126 domain; COGs: COG2860 membrane protein; InterPro IPR005115; KEGG: fbc:FB2170_15518 hypothetical protein; PFAM: Uncharacterised protein family UPF0126; SPTR: Putative uncharacterized protein; hypothetical protein 2634947 11055219 Murru_2373 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788833.1 2634333 D 886377 CDS YP_004788834.1 344203691 11055220 2635103..2636248 1 NC_015945.1 KEGG: rbi:RB2501_02375 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2636248 11055220 Murru_2374 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788834.1 2635103 D 886377 CDS YP_004788835.1 344203692 11055221 2636266..2636757 1 NC_015945.1 KEGG: ant:Arnit_0946 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2636757 11055221 Murru_2375 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788835.1 2636266 D 886377 CDS YP_004788836.1 344203693 11055222 complement(2636725..2637444) 1 NC_015945.1 PFAM: Dienelactone hydrolase family; COGs: COG0412 Dienelactone hydrolase; InterPro IPR002925; KEGG: fbc:FB2170_00660 dienelactone hydrolase family protein; PFAM: Dienelactone hydrolase; SPTR: Dienelactone hydrolase family protein; dienelactone hydrolase 2637444 11055222 Murru_2376 Muricauda ruestringensis DSM 13258 dienelactone hydrolase YP_004788836.1 2636725 R 886377 CDS YP_004788837.1 344203694 11055223 complement(2637499..2638215) 1 NC_015945.1 PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130; KEGG: rbi:RB2501_12597 peptidylprolyl isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; SPTR: Peptidyl-prolyl cis-trans isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 2638215 11055223 Murru_2377 Muricauda ruestringensis DSM 13258 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_004788837.1 2637499 R 886377 CDS YP_004788838.1 344203695 11055224 2638220..2638858 1 NC_015945.1 PFAM: NUDIX domain; InterPro IPR000086; KEGG: fbc:FB2170_15508 NUDIX family hydrolase; PFAM: NUDIX hydrolase domain; SPTR: Hydrolase, NUDIX family protein; NUDIX hydrolase 2638858 11055224 Murru_2378 Muricauda ruestringensis DSM 13258 NUDIX hydrolase YP_004788838.1 2638220 D 886377 CDS YP_004788839.1 344203696 11055225 2638899..2639720 1 NC_015945.1 PFAM: Acyltransferase; InterPro IPR002123; KEGG: fbc:FB2170_15503 hypothetical protein; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Putative uncharacterized protein; phospholipid/glycerol acyltransferase 2639720 11055225 Murru_2379 Muricauda ruestringensis DSM 13258 phospholipid/glycerol acyltransferase YP_004788839.1 2638899 D 886377 CDS YP_004788840.1 344203697 11055226 complement(2639717..2640361) 1 NC_015945.1 KEGG: gfo:GFO_1011 membrane protein; SPTR: Membrane protein; membrane protein 2640361 11055226 Murru_2380 Muricauda ruestringensis DSM 13258 membrane protein YP_004788840.1 2639717 R 886377 CDS YP_004788841.1 344203698 11055227 complement(2640364..2640858) 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: fbc:FB2170_15493 ECF family RNA polymerase sigma factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 2640858 11055227 Murru_2381 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004788841.1 2640364 R 886377 CDS YP_004788842.1 344203699 11055228 complement(2640932..2642359) 1 NC_015945.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168:IPR002933:IPR011650; KEGG: fbc:FB2170_15488 hypothetical protein; PFAM: Peptidase M20, dimerisation; Peptidase M20; SPTR: Putative uncharacterized protein; TIGRFAM: Peptidase M20D, amidohydrolase; amidohydrolase 2642359 11055228 Murru_2382 Muricauda ruestringensis DSM 13258 amidohydrolase YP_004788842.1 2640932 R 886377 CDS YP_004788843.1 344203700 11055229 2642452..2643768 1 NC_015945.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: fps:FP1931 NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: NADH dehydrogenase (ubiquinone); SPTR: Putative NADH dehydrogenase; NADH dehydrogenase (ubiquinone) 2643768 11055229 Murru_2383 Muricauda ruestringensis DSM 13258 NADH dehydrogenase (ubiquinone) YP_004788843.1 2642452 D 886377 CDS YP_004788844.1 344203701 11055230 2643864..2644115 1 NC_015945.1 hypothetical protein 2644115 11055230 Murru_2384 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788844.1 2643864 D 886377 CDS YP_004788845.1 344203702 11055231 2644157..2644378 1 NC_015945.1 hypothetical protein 2644378 11055231 Murru_2385 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788845.1 2644157 D 886377 CDS YP_004788846.1 344203703 11055232 complement(2644385..2645332) 1 NC_015945.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD; COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR011932:IPR004107:IPR002104; KEGG: fbc:FB2170_15478 putative tyrosine recombinase; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: Putative tyrosine recombinase; TIGRFAM: Tyrosine recombinase XerD; tyrosine recombinase XerC 2645332 11055232 Murru_2386 Muricauda ruestringensis DSM 13258 tyrosine recombinase XerC YP_004788846.1 2644385 R 886377 CDS YP_004788847.1 344203704 11055233 2645510..2646034 1 NC_015945.1 KEGG: fbc:FB2170_15458 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2646034 11055233 Murru_2387 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788847.1 2645510 D 886377 CDS YP_004788848.1 344203705 11055234 2646111..2646572 1 NC_015945.1 KEGG: lby:Lbys_1414 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2646572 11055234 Murru_2388 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788848.1 2646111 D 886377 CDS YP_004788849.1 344203706 11055235 2646677..2647189 1 NC_015945.1 PFAM: Protein of unknown function (DUF3308); KEGG: fbc:FB2170_15473 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2647189 11055235 Murru_2389 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788849.1 2646677 D 886377 CDS YP_004788850.1 344203707 11055236 2647226..2647693 1 NC_015945.1 PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II; COGs: COG0757 3-dehydroquinate dehydratase II; InterPro IPR001874; KEGG: fbc:FB2170_15453 3-dehydroquinate dehydratase; PFAM: Dehydroquinase, class II; PRIAM: 3-dehydroquinate dehydratase; SPTR: 3-dehydroquinate dehydratase; TIGRFAM: Dehydroquinase, class II; 3-dehydroquinate dehydratase 2647693 11055236 Murru_2390 Muricauda ruestringensis DSM 13258 3-dehydroquinate dehydratase YP_004788850.1 2647226 D 886377 CDS YP_004788851.1 344203708 11055237 complement(2647685..2647966) 1 NC_015945.1 TIGRFAM: integral membrane protein; KEGG: fbc:FB2170_15373 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2647966 11055237 Murru_2391 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788851.1 2647685 R 886377 CDS YP_004788852.1 344203709 11055238 complement(2647970..2649361) 1 NC_015945.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR006258:IPR013027:IPR004099; KEGG: fbc:FB2170_15363 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: Dihydrolipoyl dehydrogenase; SPTR: Dihydrolipoyl dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 2649361 11055238 Murru_2392 Muricauda ruestringensis DSM 13258 dihydrolipoamide dehydrogenase YP_004788852.1 2647970 R 886377 CDS YP_004788853.1 344203710 11055239 complement(2649481..2650017) 1 NC_015945.1 PFAM: Protein of unknown function (DUF1572); InterPro IPR011466; KEGG: fbc:FB2170_15358 hypothetical protein; PFAM: Protein of unknown function DUF1572; SPTR: Putative uncharacterized protein; hypothetical protein 2650017 11055239 Murru_2393 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788853.1 2649481 R 886377 CDS YP_004788854.1 344203711 11055240 complement(2650018..2650422) 1 NC_015945.1 PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; COGs: COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; InterPro IPR002579; KEGG: cat:CA2559_12453 SelR-like methionine sulfoxide reductase; PFAM: Methionine sulphoxide reductase B; PRIAM: Peptide-methionine (R)-S-oxide reductase; SPTR: SelR-like methionine sulfoxide reductase; TIGRFAM: Methionine sulphoxide reductase B; methionine-R-sulfoxide reductase 2650422 11055240 Murru_2394 Muricauda ruestringensis DSM 13258 methionine-R-sulfoxide reductase YP_004788854.1 2650018 R 886377 CDS YP_004788855.1 344203712 11055241 complement(2650439..2650930) 1 NC_015945.1 PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; COGs: COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; InterPro IPR002579; KEGG: rbi:RB2501_12647 methionine sulfoxide reductase B; PFAM: Methionine sulphoxide reductase B; PRIAM: Peptide-methionine (R)-S-oxide reductase; SPTR: Methionine sulfoxide reductase B; TIGRFAM: Methionine sulphoxide reductase B; methionine-R-sulfoxide reductase 2650930 11055241 Murru_2395 Muricauda ruestringensis DSM 13258 methionine-R-sulfoxide reductase YP_004788855.1 2650439 R 886377 CDS YP_004788856.1 344203713 11055242 complement(2651042..2651620) 1 NC_015945.1 KEGG: cat:CA2559_12458 dihydrolipoamide dehydrogenase; SPTR: Dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 2651620 11055242 Murru_2396 Muricauda ruestringensis DSM 13258 dihydrolipoamide dehydrogenase YP_004788856.1 2651042 R 886377 CDS YP_004788857.1 344203714 11055243 2651783..2653678 1 NC_015945.1 PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase; COGs: COG0296 1 4-alpha-glucan branching enzyme; HAMAP: 1,4-alpha-glucan-branching enzyme; InterProIPR006589:IPR006407:IPR004193:IPR006047:IPR 006048; KEGG: rbi:RB2501_12682 glycogen branching enzyme; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic domain; Alpha-amylase, C-terminal all beta; PRIAM: 1,4-alpha-glucan branching enzyme; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: 1,4-alpha-glucan-branching enzyme; TIGRFAM: 1,4-alpha-glucan-branching enzyme; 1,4-alpha-glucan-branching protein 2653678 11055243 Murru_2397 Muricauda ruestringensis DSM 13258 1,4-alpha-glucan-branching protein YP_004788857.1 2651783 D 886377 CDS YP_004788858.1 344203715 11055244 2653775..2656174 1 NC_015945.1 PFAM: Glycosyl hydrolases family 31; COGs: COG1501 Alpha-glucosidase family 31 of glycosyl hydrolase; InterPro IPR000322; KEGG: fbc:FB2170_15338 alpha-glucosidase; PFAM: Glycoside hydrolase, family 31; PRIAM: Alpha-glucosidase; SPTR: Alpha-glucosidase, family 31 of glycosyl hydrolase; Alpha-glucosidase 2656174 11055244 Murru_2398 Muricauda ruestringensis DSM 13258 Alpha-glucosidase YP_004788858.1 2653775 D 886377 CDS YP_004788859.1 344203716 11055245 2656213..2657022 1 NC_015945.1 PFAM: Peptidase family M48; COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR001915; KEGG: fbc:FB2170_15333 hypothetical protein; PFAM: Peptidase M48; SPTR: Putative uncharacterized protein; peptidase M48 Ste24p 2657022 11055245 Murru_2399 Muricauda ruestringensis DSM 13258 peptidase M48 Ste24p YP_004788859.1 2656213 D 886377 CDS YP_004788860.1 344203717 11055246 2657182..2658504 1 NC_015945.1 PFAM: Vacuole effluxer Atg22 like; COGs: COG2270 Permease of the major facilitator superfamily; KEGG: fbc:FB2170_15328 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2658504 11055246 Murru_2400 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788860.1 2657182 D 886377 CDS YP_004788861.1 344203718 11055247 2658509..2659429 1 NC_015945.1 PFAM: YdjC-like protein; COGs: COG3394 conserved hypothetical protein; InterPro IPR006879; KEGG: fjo:Fjoh_0046 YdjC family protein; PFAM: Uncharacterised protein family UPF0249/HpnK; SPTR: YdjC family protein; hypothetical protein 2659429 11055247 Murru_2401 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788861.1 2658509 D 886377 CDS YP_004788862.1 344203719 11055248 complement(2659503..2660228) 1 NC_015945.1 PFAM: Protein of unknown function (DUF2807); KEGG: fbc:FB2170_15323 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2660228 11055248 Murru_2402 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788862.1 2659503 R 886377 CDS YP_004788863.1 344203720 11055249 complement(2660262..2661359) 1 NC_015945.1 KEGG: fbc:FB2170_15318 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2661359 11055249 Murru_2403 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788863.1 2660262 R 886377 CDS YP_004788864.1 344203721 11055250 complement(2661340..2661897) 1 NC_015945.1 KEGG: fbc:FB2170_15313 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2661897 11055250 Murru_2404 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788864.1 2661340 R 886377 CDS YP_004788865.1 344203722 11055251 complement(2661900..2662457) 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: fbc:FB2170_15308 hypothetical protein; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: Putative uncharacterized protein; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 2662457 11055251 Murru_2405 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004788865.1 2661900 R 886377 CDS YP_004788866.1 344203723 11055252 2662637..2665126 1 NC_015945.1 PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La; COGs: COG0466 ATP-dependent Lon protease; InterProIPR003111:IPR003593:IPR004815:IPR003959:IPR 008269; KEGG: fbc:FB2170_15303 ATP-dependent protease; PFAM: Peptidase S16, Lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core; PRIAM: Endopeptidase La; SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; SPTR: ATP-dependent protease La; TIGRFAM: Peptidase S16, ATP-dependent protease La; anti-sigma H sporulation factor LonB 2665126 11055252 Murru_2406 Muricauda ruestringensis DSM 13258 anti-sigma H sporulation factor LonB YP_004788866.1 2662637 D 886377 CDS YP_004788867.1 344203724 11055253 2665234..2665932 1 NC_015945.1 PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase; COGs: COG0283 Cytidylate kinase; HAMAP: Cytidylate kinase; InterPro IPR003136:IPR000623:IPR011994; KEGG: fbc:FB2170_15298 cytidylate kinase; PFAM: Cytidylate kinase domain; Shikimate kinase; SPTR: Cytidylate kinase; TIGRFAM: Cytidylate kinase; cytidylate kinase 2665932 11055253 Murru_2407 Muricauda ruestringensis DSM 13258 cytidylate kinase YP_004788867.1 2665234 D 886377 CDS YP_004788868.1 344203725 11055254 complement(2665979..2666335) 1 NC_015945.1 PFAM: Helix-turn-helix; COGs: COG5499 transcription regulator containing HTH domain; InterPro IPR001387; KEGG: gfo:GFO_0922 HTH_3 family transcriptional regulator protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Predicted transcription regulator containing helix turn helix domain; XRE family transcriptional regulator 2666335 11055254 Murru_2408 Muricauda ruestringensis DSM 13258 XRE family transcriptional regulator YP_004788868.1 2665979 R 886377 CDS YP_004788869.1 344203726 11055255 complement(2666339..2666632) 1 NC_015945.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2136); COGs: COG4680 conserved hypothetical protein; InterPro IPR018669; KEGG: gfo:GFO_0923 hypothetical protein; PFAM: Protein of unknown function DUF2136; SPTR: Putative uncharacterized protein; hypothetical protein 2666632 11055255 Murru_2409 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788869.1 2666339 R 886377 CDS YP_004788870.1 344203727 11055256 complement(2666839..2668146) 1 NC_015945.1 PFAM: Predicted membrane protein (DUF2254); COGs: COG4325 membrane protein; InterPro IPR018723; KEGG: cyc:PCC7424_1901 hypothetical protein; PFAM: Protein of unknown function DUF2254, membrane; SPTR: Putative uncharacterized protein; hypothetical protein 2668146 11055256 Murru_2410 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788870.1 2666839 R 886377 CDS YP_004788871.1 344203728 11055257 complement(2668201..2668485) 1 NC_015945.1 KEGG: syp:SYNPCC7002_A0304 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2668485 11055257 Murru_2411 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788871.1 2668201 R 886377 CDS YP_004788872.1 344203729 11055258 complement(2668802..2669182) 1 NC_015945.1 PFAM: LysM domain; InterPro IPR002482:IPR018392; KEGG: rbi:RB2501_12754 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Putative uncharacterized protein; peptidoglycan-binding lysin domain-containing protein 2669182 11055258 Murru_2412 Muricauda ruestringensis DSM 13258 peptidoglycan-binding lysin domain-containing protein YP_004788872.1 2668802 R 886377 CDS YP_004788873.1 344203730 11055259 2669241..2671277 1 NC_015945.1 PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1; COGs: COG0539 Ribosomal protein S1; InterPro IPR022967:IPR003029; KEGG: fbc:FB2170_15288 putative 30S ribosomal protein S1; PFAM: Ribosomal protein S1, RNA-binding domain; SMART: RNA-binding domain, S1; SPTR: Putative 30S ribosomal protein S1; RNA binding S1 domain-containing protein 2671277 11055259 Murru_2413 Muricauda ruestringensis DSM 13258 RNA binding S1 domain-containing protein YP_004788873.1 2669241 D 886377 CDS YP_004788874.1 344203731 11055260 2671393..2671929 1 NC_015945.1 PFAM: Phosphoribosyl transferase domain; COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; InterPro IPR000836; KEGG: fbc:FB2170_15243 pyrimidine regulatory protein PyrR; PFAM: Phosphoribosyltransferase; PRIAM: Uracil phosphoribosyltransferase; SPTR: Pyrimidine regulatory protein PyrR; uracil phosphoribosyltransferase 2671929 11055260 Murru_2414 Muricauda ruestringensis DSM 13258 uracil phosphoribosyltransferase YP_004788874.1 2671393 D 886377 CDS YP_004788875.1 344203732 11055261 2671936..2672862 1 NC_015945.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; HAMAP: Aspartate carbamoyltransferase, eukaryotic; InterPro IPR002082:IPR006132:IPR006131; KEGG: fbc:FB2170_15238 aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; PRIAM: Aspartate carbamoyltransferase; SPTR: Aspartate carbamoyltransferase; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; aspartate carbamoyltransferase 2672862 11055261 Murru_2415 Muricauda ruestringensis DSM 13258 aspartate carbamoyltransferase YP_004788875.1 2671936 D 886377 CDS YP_004788876.1 344203733 11055262 2672866..2673198 1 NC_015945.1 KEGG: fbc:FB2170_15233 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2673198 11055262 Murru_2416 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788876.1 2672866 D 886377 CDS YP_004788877.1 344203734 11055263 2673195..2674103 1 NC_015945.1 PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: ribonuclease Z; COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; HAMAP: Ribonuclease Z; InterPro IPR013471:IPR001279; KEGG: fbc:FB2170_15228 ribonuclease Z; PFAM: Beta-lactamase-like; SPTR: Ribonuclease Z; ribonuclease Z 2674103 11055263 Murru_2417 Muricauda ruestringensis DSM 13258 ribonuclease Z YP_004788877.1 2673195 D 886377 CDS YP_004788878.1 344203735 11055264 2674232..2674879 1 NC_015945.1 PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase; COGs: COG0259 Pyridoxamine-phosphate oxidase; HAMAP: Pyridoxamine 5'-phosphate oxidase; InterPro IPR000659:IPR011576:IPR019576; KEGG: fbc:FB2170_15223 pyridoxamine 5-phosphate oxidase; PFAM: Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal; Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; PRIAM: Pyridoxal 5'-phosphate synthase; SPTR: Pyridoxine/pyridoxamine 5'-phosphate oxidase; TIGRFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxine/pyridoxamine 5'-phosphate oxidase 2674879 11055264 Murru_2418 Muricauda ruestringensis DSM 13258 pyridoxine/pyridoxamine 5'-phosphate oxidase YP_004788878.1 2674232 D 886377 CDS YP_004788879.1 344203736 11055265 2674890..2675378 1 NC_015945.1 PFAM: Phosphoglycerate mutase family; COGs: COG2062 Phosphohistidine phosphatase SixA; InterPro IPR013078; KEGG: fbc:FB2170_15218 phosphoglycerate mutase family domain-containing protein; PFAM: Histidine phosphatase superfamily, clade-1; SPTR: Phosphoglycerate mutase family domain protein; putative phosphohistidine phosphatase SixA 2675378 11055265 Murru_2419 Muricauda ruestringensis DSM 13258 putative phosphohistidine phosphatase SixA YP_004788879.1 2674890 D 886377 CDS YP_004788880.1 344203737 11055266 2675379..2677454 1 NC_015945.1 PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; COGs: COG0855 Polyphosphate kinase; InterPro IPR003414; KEGG: rbi:RB2501_12794 polyphosphate kinase; PFAM: Polyphosphate kinase; PRIAM: Polyphosphate kinase; SPTR: Polyphosphate kinase; TIGRFAM: Polyphosphate kinase; polyphosphate kinase 1 2677454 11055266 Murru_2420 Muricauda ruestringensis DSM 13258 polyphosphate kinase 1 YP_004788880.1 2675379 D 886377 CDS YP_004788881.1 344203738 11055267 complement(2677451..2678032) 1 NC_015945.1 PFAM: tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE); COGs: COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA; KEGG: rbi:RB2501_12809 putative tRNA-hydroxylase; PFAM: tRNA--hydroxylase; SPTR: Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA; tRNA-hydroxylase 2678032 11055267 Murru_2421 Muricauda ruestringensis DSM 13258 tRNA-hydroxylase YP_004788881.1 2677451 R 886377 CDS YP_004788882.1 344203739 11055268 2678130..2678975 1 NC_015945.1 KEGG: rbi:RB2501_12814 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2678975 11055268 Murru_2422 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788882.1 2678130 D 886377 CDS YP_004788883.1 344203740 11055269 2678980..2679888 1 NC_015945.1 PFAM: TatD related DNase; COGs: COG1099 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR001130; KEGG: rbi:RB2501_12819 hypothetical protein; PFAM: Deoxyribonuclease, TatD-related; SPTR: Putative uncharacterized protein; TatD-related deoxyribonuclease 2679888 11055269 Murru_2423 Muricauda ruestringensis DSM 13258 TatD-related deoxyribonuclease YP_004788883.1 2678980 D 886377 CDS YP_004788884.1 344203741 11055270 2679888..2680787 1 NC_015945.1 PFAM: UbiA prenyltransferase family; InterPro IPR000537; KEGG: rbi:RB2501_12824 hypothetical protein; PFAM: UbiA prenyltransferase; SPTR: Putative uncharacterized protein; UbiA prenyltransferase 2680787 11055270 Murru_2424 Muricauda ruestringensis DSM 13258 UbiA prenyltransferase YP_004788884.1 2679888 D 886377 CDS YP_004788885.1 344203742 11055271 2680791..2681960 1 NC_015945.1 PFAM: 3-dehydroquinate synthase; COGs: COG0337 3-dehydroquinate synthetase; InterPro IPR002658; KEGG: rbi:RB2501_12829 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase AroB; PRIAM: 3-dehydroquinate synthase; SPTR: 3-dehydroquinate synthase; 3-dehydroquinate synthase 2681960 11055271 Murru_2425 Muricauda ruestringensis DSM 13258 3-dehydroquinate synthase YP_004788885.1 2680791 D 886377 CDS YP_004788886.1 344203743 11055272 2681957..2683147 1 NC_015945.1 KEGG: rbi:RB2501_12834 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2683147 11055272 Murru_2426 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788886.1 2681957 D 886377 CDS YP_004788887.1 344203744 11055273 2683144..2684517 1 NC_015945.1 PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591; KEGG: rbi:RB2501_12839 hypothetical protein; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR: Putative uncharacterized protein; type I phosphodiesterase/nucleotide pyrophosphatase 2684517 11055273 Murru_2427 Muricauda ruestringensis DSM 13258 type I phosphodiesterase/nucleotide pyrophosphatase YP_004788887.1 2683144 D 886377 CDS YP_004788888.1 344203745 11055274 2684520..2684882 1 NC_015945.1 KEGG: fbc:FB2170_15208 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2684882 11055274 Murru_2428 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788888.1 2684520 D 886377 CDS YP_004788889.1 344203746 11055275 complement(2684871..2686688) 1 NC_015945.1 PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau; COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR003593:IPR012763:IPR003959; KEGG: fbc:FB2170_15203 DNA polymerase III subunit gamma/tau; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: DNA polymerase III subunit gamma/tau; TIGRFAM: DNA polymerase III, subunit gamma/ tau; DNA polymerase III subunits gamma and tau 2686688 11055275 Murru_2429 Muricauda ruestringensis DSM 13258 DNA polymerase III subunits gamma and tau YP_004788889.1 2684871 R 886377 CDS YP_004788890.1 344203747 11055277 complement(2687045..2687584) 1 NC_015945.1 PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family; COGs: COG0742 N6-adenine-specific methylase; InterPro IPR004398; KEGG: coc:Coch_1989 hypothetical protein; PFAM: RNA methyltransferase, RsmD; SPTR: Putative uncharacterized protein; TIGRFAM: RNA methyltransferase, RsmD; methyltransferase 2687584 11055277 Murru_2430 Muricauda ruestringensis DSM 13258 methyltransferase YP_004788890.1 2687045 R 886377 CDS YP_004788891.1 344203748 11055278 complement(2687584..2688342) 1 NC_015945.1 KEGG: fbc:FB2170_15188 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2688342 11055278 Murru_2431 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788891.1 2687584 R 886377 CDS YP_004788892.1 344203749 11055279 complement(2688399..2689136) 1 NC_015945.1 KEGG: rbi:RB2501_12864 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2689136 11055279 Murru_2432 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788892.1 2688399 R 886377 CDS YP_004788893.1 344203750 11055280 2689244..2690677 1 NC_015945.1 COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; KEGG: fbc:FB2170_15178 ATP-dependent exoDNAse subunit alpha; SPTR: ATP-dependent exoDNAse (Exonuclease V), alpha subunit-helicase superfamily I member; ATP-dependent exoDNAse subunit alpha 2690677 11055280 Murru_2433 Muricauda ruestringensis DSM 13258 ATP-dependent exoDNAse subunit alpha YP_004788893.1 2689244 D 886377 CDS YP_004788894.1 344203751 11055281 2690702..2691271 1 NC_015945.1 KEGG: fbc:FB2170_15173 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2691271 11055281 Murru_2434 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788894.1 2690702 D 886377 CDS YP_004788895.1 344203752 11055282 2691312..2692025 1 NC_015945.1 PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; COGs: COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; InterPro IPR004528:IPR003329; KEGG: fbc:FB2170_15168 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: Acylneuraminate cytidylyltransferase; PRIAM: 3-deoxy-manno-octulosonate cytidylyltransferase; SPTR: 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; 3-deoxy-manno-octulosonate cytidylyltransferase 2692025 11055282 Murru_2435 Muricauda ruestringensis DSM 13258 3-deoxy-manno-octulosonate cytidylyltransferase YP_004788895.1 2691312 D 886377 CDS YP_004788896.1 344203753 11055283 2692016..2692720 1 NC_015945.1 PFAM: haloacid dehalogenase-like hydrolase; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834; KEGG: fbc:FB2170_15163 hypothetical protein; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Putative uncharacterized protein; haloacid dehalogenase domain-containing protein hydrolase 2692720 11055283 Murru_2436 Muricauda ruestringensis DSM 13258 haloacid dehalogenase domain-containing protein hydrolase YP_004788896.1 2692016 D 886377 CDS YP_004788897.1 344203754 11055284 2692720..2693847 1 NC_015945.1 PFAM: Iron-containing alcohol dehydrogenase; COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR001670; KEGG: fbc:FB2170_15158 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; SPTR: Iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2693847 11055284 Murru_2437 Muricauda ruestringensis DSM 13258 iron-containing alcohol dehydrogenase YP_004788897.1 2692720 D 886377 CDS YP_004788898.1 344203755 11055285 2693881..2694423 1 NC_015945.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: fbc:FB2170_15153 hypothetical protein; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Putative uncharacterized protein; phospholipid/glycerol acyltransferase 2694423 11055285 Murru_2438 Muricauda ruestringensis DSM 13258 phospholipid/glycerol acyltransferase YP_004788898.1 2693881 D 886377 CDS YP_004788899.1 344203756 11055286 complement(2694443..2694586) 1 NC_015945.1 hypothetical protein 2694586 11055286 Murru_2439 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788899.1 2694443 R 886377 CDS YP_004788900.1 344203757 11055287 2694906..2695910 1 NC_015945.1 PFAM: Amidohydrolase; COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: rbi:RB2501_13124 hypothetical protein; PFAM: Amidohydrolase 2; SPTR: Putative uncharacterized protein; amidohydrolase 2 2695910 11055287 Murru_2440 Muricauda ruestringensis DSM 13258 amidohydrolase 2 YP_004788900.1 2694906 D 886377 CDS YP_004788901.1 344203758 11055288 complement(2695983..2696693) 1 NC_015945.1 PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family; COGs: COG0217 conserved hypothetical protein; HAMAP: Protein of unknown function DUF28; InterPro IPR002876; KEGG: rbi:RB2501_12914 hypothetical protein; PFAM: Protein of unknown function DUF28; SPTR: UPF0082 protein RB2501_12914; TIGRFAM: Protein of unknown function DUF28; hypothetical protein 2696693 11055288 Murru_2441 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788901.1 2695983 R 886377 CDS YP_004788902.1 344203759 11055289 complement(2696765..2697046) 1 NC_015945.1 PFAM: Pterin 4 alpha carbinolamine dehydratase; COGs: COG2154 Pterin-4a-carbinolamine dehydratase; HAMAP: Transcriptional coactivator/pterin dehydratase; InterPro IPR001533; KEGG: cat:CA2559_11183 pterin-4A-carbinolamine dehydratase; PFAM: Transcriptional coactivator/pterin dehydratase; SPTR: Putative pterin-4-alpha-carbinolamine dehydratase; pterin-4-alpha-carbinolamine dehydratase 2697046 11055289 Murru_2442 Muricauda ruestringensis DSM 13258 pterin-4-alpha-carbinolamine dehydratase YP_004788902.1 2696765 R 886377 CDS YP_004788903.1 344203760 11055290 complement(2697095..2697913) 1 NC_015945.1 PFAM: RmlD substrate binding domain; COGs: COG1091 dTDP-4-dehydrorhamnose reductase; InterPro IPR001509; KEGG: fbc:FB2170_15138 NAD dependent epimerase/dehydratase family protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase 2697913 11055290 Murru_2443 Muricauda ruestringensis DSM 13258 NAD-dependent epimerase/dehydratase YP_004788903.1 2697095 R 886377 CDS YP_004788904.1 344203761 11055291 complement(2697921..2699009) 1 NC_015945.1 PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: glycine cleavage system T protein; COGs: COG0404 Glycine cleavage system T protein (aminomethyltransferase); HAMAP: Aminomethyltransferase; InterPro IPR006223:IPR006222:IPR013977:IPR022903; KEGG: fbc:FB2170_15133 aminomethyltransferase; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; PRIAM: Aminomethyltransferase; SPTR: Aminomethyltransferase; TIGRFAM: Glycine cleavage system T protein; aminomethyltransferase 2699009 11055291 Murru_2444 Muricauda ruestringensis DSM 13258 aminomethyltransferase YP_004788904.1 2697921 R 886377 CDS YP_004788905.1 344203762 11055292 complement(2699111..2700406) 1 NC_015945.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; COGs: COG0498 Threonine synthase; InterPro IPR004450:IPR001926; KEGG: fbc:FB2170_15128 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Threonine synthase; SPTR: Threonine synthase; TIGRFAM: Threonine synthase; threonine synthase 2700406 11055292 Murru_2445 Muricauda ruestringensis DSM 13258 threonine synthase YP_004788905.1 2699111 R 886377 CDS YP_004788906.1 344203763 11055293 complement(2700411..2701334) 1 NC_015945.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: homoserine kinase; COGs: COG0083 Homoserine kinase; InterPro IPR000870:IPR006204:IPR013750; KEGG: fbc:FB2170_15123 homoserine kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal; SPTR: Homoserine kinase; TIGRFAM: Homoserine kinase; homoserine kinase 2701334 11055293 Murru_2446 Muricauda ruestringensis DSM 13258 homoserine kinase YP_004788906.1 2700411 R 886377 CDS YP_004788907.1 344203764 11055294 complement(2701338..2703782) 1 NC_015945.1 PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; Amino acid kinase family; ACT domain; TIGRFAM: aspartate kinase; COGs: COG0527 Aspartokinase; InterProIPR001341:IPR001048:IPR002912:IPR005106:IPR 001342; KEGG: fbc:FB2170_15118 aspartokinase/homoserine dehydrogenase; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; Aspartate/homoserine dehydrogenase, NAD-binding; PRIAM: Aspartate kinase., Homoserine dehydrogenase; SPTR: Aspartokinase/homoserine dehydrogenase; TIGRFAM: Aspartate kinase domain; aspartate kinase 2703782 11055294 Murru_2447 Muricauda ruestringensis DSM 13258 aspartate kinase YP_004788907.1 2701338 R 886377 CDS YP_004788908.1 344203765 11055295 2704041..2705579 1 NC_015945.1 PFAM: Carbohydrate kinase; YjeF-related protein N-terminus; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF N-terminal region; COGs: COG0063 sugar kinase; InterPro IPR004443:IPR000631; KEGG: fbc:FB2170_15108 putative sugar kinase; PFAM: YjeF-related protein, N-terminal; Uncharacterised protein family, carbohydrate kinase-related; SPTR: Putative sugar kinase; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; YjeF-like protein 2705579 11055295 Murru_2448 Muricauda ruestringensis DSM 13258 YjeF-like protein YP_004788908.1 2704041 D 886377 CDS YP_004788909.1 344203766 11055296 complement(2705580..2705999) 1 NC_015945.1 KEGG: fbc:FB2170_15103 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2705999 11055296 Murru_2449 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788909.1 2705580 R 886377 CDS YP_004788910.1 344203767 11055297 complement(2706160..2708715) 1 NC_015945.1 PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR003593:IPR004176:IPR003959:IPR001943:IPR 013093:IPR019489; KEGG: fbc:FB2170_15098 ATP-dependent Clp protease, ATP-binding subunit ClpC; PFAM: ATPase, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent Clp protease, ATP-binding subunit ClpC; ATPase AAA-2 domain-containing protein 2708715 11055297 Murru_2450 Muricauda ruestringensis DSM 13258 ATPase AAA-2 domain-containing protein YP_004788910.1 2706160 R 886377 CDS YP_004788911.1 344203768 11055298 2708976..2711504 1 NC_015945.1 PFAM: DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A; TIGRFAM: DNA gyrase, A subunit; COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR002205:IPR005743:IPR006691; KEGG: fbc:FB2170_15093 DNA gyrase subunit A; PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit A/C-terminal; SPTR: DNA gyrase A subunit; TIGRFAM: DNA gyrase, subunit A; DNA gyrase subunit A 2711504 11055298 Murru_2451 Muricauda ruestringensis DSM 13258 DNA gyrase subunit A YP_004788911.1 2708976 D 886377 CDS YP_004788912.1 344203769 11055299 2711545..2712807 1 NC_015945.1 PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR013105:IPR001440; KEGG: rbi:RB2501_12979 TPR repeat protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SPTR: TPR repeat protein; hypothetical protein 2712807 11055299 Murru_2452 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788912.1 2711545 D 886377 CDS YP_004788913.1 344203770 11055300 complement(2712858..2713610) 1 NC_015945.1 PFAM: NlpC/P60 family; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: gfo:GFO_1506 NlpC/P60 family protein; PFAM: NLP/P60; SPTR: NlpC/P60 family protein; NLP/P60 protein 2713610 11055300 Murru_2453 Muricauda ruestringensis DSM 13258 NLP/P60 protein YP_004788913.1 2712858 R 886377 CDS YP_004788914.1 344203771 11055301 complement(2713727..2714902) 1 NC_015945.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR020616:IPR020617; KEGG: fbc:FB2170_15078 putative acetyl-CoA acetyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: Probable acetyl-CoA acetyltransferase; TIGRFAM: Thiolase; acetyl-CoA acetyltransferase 2714902 11055301 Murru_2454 Muricauda ruestringensis DSM 13258 acetyl-CoA acetyltransferase YP_004788914.1 2713727 R 886377 CDS YP_004788915.1 344203772 11055302 2715016..2717052 1 NC_015945.1 PFAM: HD domain; 7TM-HD extracellular; 7TM receptor with intracellular HD hydrolase; TIGRFAM: uncharacterized domain HDIG; COGs: COG1480 membrane-associated HD superfamily hydrolase; InterPro IPR003607:IPR006675:IPR011621:IPR006674; KEGG: fbc:FB2170_15073 putative transmembrane HD family protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; Metal-dependent phosphohydrolase, 7TM intracellular domain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Putative transmembrane HD family protein; TIGRFAM: Uncharacterised protein family HDIG; 7TM receptor with intracellular metal dependent phosphohydrolase 2717052 11055302 Murru_2455 Muricauda ruestringensis DSM 13258 7TM receptor with intracellular metal dependent phosphohydrolase YP_004788915.1 2715016 D 886377 CDS YP_004788916.1 344203773 11055305 2717681..2718967 1 NC_015945.1 PFAM: Phage integrase family; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: zpr:ZPR_1263 putative transposase; PFAM: Integrase, catalytic core, phage; SPTR: Putative transposase; integrase family protein 2718967 11055305 Murru_2456 Muricauda ruestringensis DSM 13258 integrase family protein YP_004788916.1 2717681 D 886377 CDS YP_004788917.1 344203774 11055306 2719141..2719566 1 NC_015945.1 hypothetical protein 2719566 11055306 Murru_2457 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788917.1 2719141 D 886377 CDS YP_004788918.1 344203775 11055307 2719759..2720067 1 NC_015945.1 KEGG: gfo:GFO_1185 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 2720067 11055307 Murru_2458 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788918.1 2719759 D 886377 CDS YP_004788919.1 344203776 11055308 2720192..2724532 1 NC_015945.1 PFAM: AcrB/AcrD/AcrF family; Outer membrane efflux protein; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 Putative silver efflux pump; InterPro IPR004763:IPR001036:IPR003423; KEGG: rbi:RB2501_04925 putative transport-related, membrane protein; PFAM: Acriflavin resistance protein; Outer membrane efflux protein; SPTR: Putative transport-related, membrane protein; TIGRFAM: Heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump 2724532 11055308 Murru_2459 Muricauda ruestringensis DSM 13258 CzcA family heavy metal efflux pump YP_004788919.1 2720192 D 886377 CDS YP_004788920.1 344203777 11055309 2724537..2725736 1 NC_015945.1 TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: rbi:RB2501_04920 cation efflux system protein; SPTR: Cation efflux system protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 2725736 11055309 Murru_2460 Muricauda ruestringensis DSM 13258 RND family efflux transporter MFP subunit YP_004788920.1 2724537 D 886377 CDS YP_004788921.1 344203778 11055310 2725752..2726168 1 NC_015945.1 PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; KEGG: rbi:RB2501_04910 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2726168 11055310 Murru_2461 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788921.1 2725752 D 886377 CDS YP_004788922.1 344203779 11055311 2726180..2728177 1 NC_015945.1 PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterProIPR006404:IPR006416:IPR001757:IPR008250:IPR 005834; KEGG: rbi:RB2501_04905 cation-transporting ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; PRIAM: Zinc-exporting ATPase; SPTR: Cation-transporting ATPase, P-type, putative zinc-transporting ATPase; TIGRFAM: ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; cadmium-translocating P-type ATPase 2728177 11055311 Murru_2462 Muricauda ruestringensis DSM 13258 cadmium-translocating P-type ATPase YP_004788922.1 2726180 D 886377 CDS YP_004788923.1 344203780 11055312 complement(2728338..2728667) 1 NC_015945.1 PFAM: Uncharacterised BCR, YnfA/UPF0060 family; COGs: COG1742 conserved hypothetical protein; HAMAP: Uncharacterised protein family UPF0060; InterPro IPR003844; KEGG: mtt:Ftrac_0626 hypothetical protein; PFAM: Uncharacterised protein family UPF0060; SPTR: Putative uncharacterized protein; membrane protein ynfA 2728667 11055312 Murru_2463 Muricauda ruestringensis DSM 13258 membrane protein ynfA YP_004788923.1 2728338 R 886377 CDS YP_004788924.1 344203781 11055313 complement(2728667..2729116) 1 NC_015945.1 KEGG: hbo:Hbor_39730 Zn-dependent oxidoreductase, NADPH:quinone reductase; SPTR: Putative uncharacterized protein; hypothetical protein 2729116 11055313 Murru_2464 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788924.1 2728667 R 886377 CDS YP_004788925.1 344203782 11055314 2729206..2729397 1 NC_015945.1 hypothetical protein 2729397 11055314 Murru_2465 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788925.1 2729206 D 886377 CDS YP_004788926.1 344203783 11055315 complement(2729394..2729603) 1 NC_015945.1 KEGG: mtt:Ftrac_2119 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 2729603 11055315 Murru_2466 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788926.1 2729394 R 886377 CDS YP_004788927.1 344203784 11055316 complement(2729603..2730205) 1 NC_015945.1 PFAM: Heavy-metal-associated domain; MerT mercuric transport protein; TIGRFAM: copper ion binding protein; COGs: COG2608 Copper chaperone; InterPro IPR003457:IPR006121; KEGG: gfo:GFO_1324 heavy metal transport/detoxification domain-containing protein; PFAM: Heavy metal transport/detoxification protein; Mercuric transport protein MerT; SPTR: Membrane protein containing heavy metal transport/detoxification domain; heavy metal transport/detoxification protein 2730205 11055316 Murru_2467 Muricauda ruestringensis DSM 13258 heavy metal transport/detoxification protein YP_004788927.1 2729603 R 886377 CDS YP_004788928.1 344203785 11055317 complement(2730207..2730578) 1 NC_015945.1 PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: gfo:GFO_1325 transcription regulator ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: ArsR family transcriptional regulator protein; regulatory protein ArsR 2730578 11055317 Murru_2468 Muricauda ruestringensis DSM 13258 regulatory protein ArsR YP_004788928.1 2730207 R 886377 CDS YP_004788929.1 344203786 11055318 2731080..2731916 1 NC_015945.1 PFAM: Domain of unknown function (DUF932); KEGG: zpr:ZPR_4283 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2731916 11055318 Murru_2469 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788929.1 2731080 D 886377 CDS YP_004788930.1 344203787 11055319 2732573..2732914 1 NC_015945.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR011344:IPR000424; KEGG: zpr:ZPR_4270 single-strand binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; single-strand binding protein 2732914 11055319 Murru_2470 Muricauda ruestringensis DSM 13258 single-strand binding protein YP_004788930.1 2732573 D 886377 CDS YP_004788931.1 344203788 11055320 2732991..2733440 1 NC_015945.1 PFAM: Protein of unknown function (DUF2466); COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: zpr:ZPR_4133 putative DNA repair protein; PFAM: Uncharacterised protein family UPF0758; SPTR: Putative DNA repair protein; DNA repair protein RadC 2733440 11055320 Murru_2471 Muricauda ruestringensis DSM 13258 DNA repair protein RadC YP_004788931.1 2732991 D 886377 CDS YP_004788932.1 344203789 11055321 2733451..2733558 1 NC_015945.1 hypothetical protein 2733558 11055321 Murru_2472 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788932.1 2733451 D 886377 CDS YP_004788933.1 344203790 11055322 2733580..2733783 1 NC_015945.1 KEGG: zpr:ZPR_4132 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2733783 11055322 Murru_2473 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788933.1 2733580 D 886377 CDS YP_004788934.1 344203791 11055323 2734084..2734245 1 NC_015945.1 hypothetical protein 2734245 11055323 Murru_2474 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788934.1 2734084 D 886377 CDS YP_004788935.1 344203792 11055324 2734705..2735289 1 NC_015945.1 KEGG: gfo:GFO_1354 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2735289 11055324 Murru_2475 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788935.1 2734705 D 886377 CDS YP_004788936.1 344203793 11055325 2735292..2736311 1 NC_015945.1 KEGG: zpr:ZPR_4265 mobilization protein B; SPTR: Mobilization protein B; mobilization protein B 2736311 11055325 Murru_2476 Muricauda ruestringensis DSM 13258 mobilization protein B YP_004788936.1 2735292 D 886377 CDS YP_004788937.1 344203794 11055326 2736322..2737929 1 NC_015945.1 PFAM: Type IV secretion-system coupling protein DNA-binding domain; COGs: COG3505 Type IV secretory pathway VirD4 protein; KEGG: zpr:ZPR_4129 mobilisation protein C; SPTR: Mobilisation protein C; mobilization protein C 2737929 11055326 Murru_2477 Muricauda ruestringensis DSM 13258 mobilization protein C YP_004788937.1 2736322 D 886377 CDS YP_004788938.1 344203795 11055327 complement(2737981..2739726) 1 NC_015945.1 PFAM: Domain of unknown function DUF87; Bacterial protein of unknown function (DUF853); COGs: COG0433 ATPase; InterPro IPR002789; KEGG: tmz:Tmz1t_0482 protein of unknown function DUF87; PFAM: Domain of unknown function DUF87; SPTR: Predicted ATPase; hypothetical protein 2739726 11055327 Murru_2478 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788938.1 2737981 R 886377 CDS YP_004788939.1 344203796 11055328 complement(2739733..2740752) 1 NC_015945.1 KEGG: tdn:Suden_0238 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2740752 11055328 Murru_2479 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788939.1 2739733 R 886377 CDS YP_004788940.1 344203797 11055329 complement(2740754..2742361) 1 NC_015945.1 PFAM: N-6 DNA Methylase; InterPro IPR011639; KEGG: fps:FP1566 modification methyltransferase; SPTR: Putative uncharacterized protein; modification methyltransferase 2742361 11055329 Murru_2480 Muricauda ruestringensis DSM 13258 modification methyltransferase YP_004788940.1 2740754 R 886377 CDS YP_004788941.1 344203798 11055330 complement(2742348..2745326) 1 NC_015945.1 PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Eco57I restriction endonuclease; InterPro IPR007409:IPR011639; KEGG: fps:FP1567 endonuclease-methyltransferase fusion protein; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction modification methylase Eco57I; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Type IIS restriction enzyme Eco57I; type II site-specific deoxyribonuclease 2745326 11055330 Murru_2481 Muricauda ruestringensis DSM 13258 type II site-specific deoxyribonuclease YP_004788941.1 2742348 R 886377 CDS YP_004788942.1 344203799 11055331 complement(2745329..2745661) 1 NC_015945.1 PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: fps:FP0857 putative DNA binding protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative DNA binding protein; helix-turn-helix domain-containing protein 2745661 11055331 Murru_2482 Muricauda ruestringensis DSM 13258 helix-turn-helix domain-containing protein YP_004788942.1 2745329 R 886377 CDS YP_004788943.1 344203800 11055332 complement(2745942..2746316) 1 NC_015945.1 PFAM: Helix-turn-helix; InterPro IPR001387; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein 2746316 11055332 Murru_2483 Muricauda ruestringensis DSM 13258 helix-turn-helix domain-containing protein YP_004788943.1 2745942 R 886377 CDS YP_004788944.1 344203801 11055333 2747035..2750064 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: fjo:Fjoh_3556 TonB-dependent receptor, plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein, probably involved in nutrient binding; TonB-dependent receptor plug 2750064 11055333 Murru_2484 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004788944.1 2747035 D 886377 CDS YP_004788945.1 344203802 11055334 2750075..2751484 1 NC_015945.1 PFAM: SusD family; InterPro IPR012944; KEGG: fjo:Fjoh_3036 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 2751484 11055334 Murru_2485 Muricauda ruestringensis DSM 13258 RagB/SusD domain-containing protein YP_004788945.1 2750075 D 886377 CDS YP_004788946.1 344203803 11055335 2751471..2753780 1 NC_015945.1 KEGG: sus:Acid_7167 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2753780 11055335 Murru_2486 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788946.1 2751471 D 886377 CDS YP_004788947.1 344203804 11055336 complement(2753831..2754085) 1 NC_015945.1 hypothetical protein 2754085 11055336 Murru_2487 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788947.1 2753831 R 886377 CDS YP_004788948.1 344203805 11055337 complement(2754202..2755230) 1 NC_015945.1 KEGG: fjo:Fjoh_3038 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2755230 11055337 Murru_2488 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788948.1 2754202 R 886377 CDS YP_004788949.1 344203806 11055338 complement(2755248..2755709) 1 NC_015945.1 KEGG: fjo:Fjoh_3560 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2755709 11055338 Murru_2489 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788949.1 2755248 R 886377 CDS YP_004788950.1 344203807 11055339 complement(2755777..2756739) 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR018060:IPR000005; KEGG: zpr:ZPR_0531 AraC family transcription regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: AraC family transcription regulator; AraC family transcriptional regulator 2756739 11055339 Murru_2490 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004788950.1 2755777 R 886377 CDS YP_004788951.1 344203808 11055340 complement(2756793..2757164) 1 NC_015945.1 KEGG: gfo:GFO_1377 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2757164 11055340 Murru_2491 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788951.1 2756793 R 886377 CDS YP_004788952.1 344203809 11055341 2757540..2758379 1 NC_015945.1 PFAM: RteC protein; InterPro IPR018534; KEGG: fps:FP1540 hypothetical protein; PFAM: Tetracycline regulation of excision, RteC; SPTR: Putative uncharacterized protein; Tetracycline regulation of excision, RteC 2758379 11055341 Murru_2492 Muricauda ruestringensis DSM 13258 Tetracycline regulation of excision, RteC YP_004788952.1 2757540 D 886377 CDS YP_004788953.1 344203810 11055342 2758666..2758944 1 NC_015945.1 KEGG: zpr:ZPR_2233 putative DNA-binding protein; SPTR: Putative DNA-binding protein; putative DNA-binding protein 2758944 11055342 Murru_2493 Muricauda ruestringensis DSM 13258 putative DNA-binding protein YP_004788953.1 2758666 D 886377 CDS YP_004788954.1 344203811 11055343 2758947..2759486 1 NC_015945.1 KEGG: zpr:ZPR_1275 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2759486 11055343 Murru_2494 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788954.1 2758947 D 886377 CDS YP_004788955.1 344203812 11055344 2759483..2760145 1 NC_015945.1 KEGG: zpr:ZPR_1274 ATPase; SPTR: ATPase; ATPase 2760145 11055344 Murru_2495 Muricauda ruestringensis DSM 13258 ATPase YP_004788955.1 2759483 D 886377 CDS YP_004788956.1 344203813 11055345 2760393..2761124 1 NC_015945.1 PFAM: CAAX amino terminal protease family; InterPro IPR003675; KEGG: mtt:Ftrac_3434 abortive infection protein; PFAM: Abortive infection protein; SPTR: CAAX amino terminal protease family protein; abortive infection protein 2761124 11055345 Murru_2496 Muricauda ruestringensis DSM 13258 abortive infection protein YP_004788956.1 2760393 D 886377 CDS YP_004788957.1 344203814 11055346 2761412..2763115 1 NC_015945.1 PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: gau:GAU_3453 beta-lactamase family protein; PFAM: Beta-lactamase-related; SPTR: Putative 6-aminohexanoate-dimer hydrolase; beta-lactamase 2763115 11055346 Murru_2497 Muricauda ruestringensis DSM 13258 beta-lactamase YP_004788957.1 2761412 D 886377 CDS YP_004788958.1 344203815 11055347 2763150..2764262 1 NC_015945.1 PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: kko:Kkor_0097 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase 2764262 11055347 Murru_2498 Muricauda ruestringensis DSM 13258 beta-lactamase YP_004788958.1 2763150 D 886377 CDS YP_004788959.1 344203816 11055348 2764259..2764963 1 NC_015945.1 KEGG: gfo:GFO_3458 secreted protein; SPTR: Putative uncharacterized protein; hypothetical protein 2764963 11055348 Murru_2499 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788959.1 2764259 D 886377 CDS YP_004788960.1 344203817 11055349 2764970..2766433 1 NC_015945.1 PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: rbi:RB2501_10982 penicillin-binding protein; PFAM: Beta-lactamase-related; SPTR: Penicillin-binding protein, putative; beta-lactamase 2766433 11055349 Murru_2500 Muricauda ruestringensis DSM 13258 beta-lactamase YP_004788960.1 2764970 D 886377 CDS YP_004788961.1 344203818 11055350 2766430..2767530 1 NC_015945.1 PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: kko:Kkor_0099 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase 2767530 11055350 Murru_2501 Muricauda ruestringensis DSM 13258 beta-lactamase YP_004788961.1 2766430 D 886377 CDS YP_004788962.1 344203819 11055351 2767813..2768931 1 NC_015945.1 PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: zpr:ZPR_3293 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase 2768931 11055351 Murru_2502 Muricauda ruestringensis DSM 13258 beta-lactamase YP_004788962.1 2767813 D 886377 CDS YP_004788963.1 344203820 11055352 2769002..2769337 1 NC_015945.1 KEGG: zpr:ZPR_3294 membrane protein; SPTR: Membrane protein; membrane protein 2769337 11055352 Murru_2503 Muricauda ruestringensis DSM 13258 membrane protein YP_004788963.1 2769002 D 886377 CDS YP_004788964.1 344203821 11055353 2769321..2769899 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: zpr:ZPR_3295 RNA polymerase sigma-70 factor, ECF subfamily protein; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma-70 factor, ECF subfamily protein; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 2769899 11055353 Murru_2504 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004788964.1 2769321 D 886377 CDS YP_004788965.1 344203822 11055354 2769921..2770265 1 NC_015945.1 hypothetical protein 2770265 11055354 Murru_2505 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788965.1 2769921 D 886377 CDS YP_004788966.1 344203823 11055355 2770269..2771030 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: dfe:Dfer_4652 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family; AraC family transcriptional regulator 2771030 11055355 Murru_2506 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004788966.1 2770269 D 886377 CDS YP_004788967.1 344203824 11055357 2771551..2773008 1 NC_015945.1 PFAM: Amidohydrolase family; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: gau:GAU_1079 hypothetical protein; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase family protein; amidohydrolase 2773008 11055357 Murru_2508 Muricauda ruestringensis DSM 13258 amidohydrolase YP_004788967.1 2771551 D 886377 CDS YP_004788968.1 344203825 11055358 2773005..2773961 1 NC_015945.1 PFAM: WD40-like Beta Propeller Repeat; InterPro IPR011659; KEGG: cpi:Cpin_4395 hypothetical protein; PFAM: WD40-like Beta Propeller; SPTR: Putative uncharacterized protein; WD40-like beta Propeller containing protein 2773961 11055358 Murru_2509 Muricauda ruestringensis DSM 13258 WD40-like beta Propeller containing protein YP_004788968.1 2773005 D 886377 CDS YP_004788969.1 344203826 11055359 2773961..2774968 1 NC_015945.1 PFAM: Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; COGs: COG4927 choloylglycine hydrolase; InterPro IPR005079; KEGG: bcz:pE33L466_0332 choloylglycine hydrolase; PFAM: Peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; SPTR: Choloylglycine hydrolase; peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 2774968 11055359 Murru_2510 Muricauda ruestringensis DSM 13258 peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase YP_004788969.1 2773961 D 886377 CDS YP_004788970.1 344203827 11055360 2775020..2776039 1 NC_015945.1 PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: mtt:Ftrac_3433 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase domain protein; polysaccharide deacetylase 2776039 11055360 Murru_2511 Muricauda ruestringensis DSM 13258 polysaccharide deacetylase YP_004788970.1 2775020 D 886377 CDS YP_004788971.1 344203828 11055361 2776071..2777942 1 NC_015945.1 PFAM: IPT/TIG domain; Regulator of chromosome condensation (RCC1) repeat; COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR002909; KEGG: cki:Calkr_0021 regulator of chromosome condensation RCC1; PFAM: Cell surface receptor IPT/TIG; SMART: Cell surface receptor IPT/TIG; SPTR: Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; cell surface receptor IPT/TIG domain-containing protein 2777942 11055361 Murru_2512 Muricauda ruestringensis DSM 13258 cell surface receptor IPT/TIG domain-containing protein YP_004788971.1 2776071 D 886377 CDS YP_004788972.1 344203829 11055362 2778010..2779143 1 NC_015945.1 PFAM: Amidohydrolase family; InterPro IPR006680; KEGG: ttu:TERTU_1298 amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase; amidohydrolase 2779143 11055362 Murru_2513 Muricauda ruestringensis DSM 13258 amidohydrolase YP_004788972.1 2778010 D 886377 CDS YP_004788973.1 344203830 11055363 2779214..2779768 1 NC_015945.1 KEGG: kko:Kkor_1036 hypothetical protein; SPTR: Hydrolase, NUDIX family; hypothetical protein 2779768 11055363 Murru_2514 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788973.1 2779214 D 886377 CDS YP_004788974.1 344203831 11055364 2779834..2781201 1 NC_015945.1 PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: phe:Phep_2415 beta-lactamase; PFAM: Beta-lactamase-related; PRIAM: Serine-type D-Ala-D-Ala carboxypeptidase; SPTR: Beta-lactamase; serine-type D-Ala-D-Ala carboxypeptidase 2781201 11055364 Murru_2515 Muricauda ruestringensis DSM 13258 serine-type D-Ala-D-Ala carboxypeptidase YP_004788974.1 2779834 D 886377 CDS YP_004788975.1 344203832 11055365 2781227..2781919 1 NC_015945.1 KEGG: bbe:BBR47_31590 hypothetical protein; SPTR: Hypothetical membrane protein; hypothetical protein 2781919 11055365 Murru_2516 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788975.1 2781227 D 886377 CDS YP_004788976.1 344203833 11055366 2782468..2782986 1 NC_015945.1 hypothetical protein 2782986 11055366 Murru_2517 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788976.1 2782468 D 886377 CDS YP_004788977.1 344203834 11055367 2783223..2784221 1 NC_015945.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR020843:IPR013154:IPR013149; KEGG: pjd:Pjdr2_0556 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; PRIAM: NADPH:quinone reductase; SMART: Polyketide synthase, enoylreductase; SPTR: Alcohol dehydrogenase, zinc containing; NADPH:quinone reductase 2784221 11055367 Murru_2518 Muricauda ruestringensis DSM 13258 NADPH:quinone reductase YP_004788977.1 2783223 D 886377 CDS YP_004788978.1 344203835 11055368 complement(2784295..2785209) 1 NC_015945.1 PFAM: Bacterial regulatory proteins, luxR family; PAS fold; TIGRFAM: PAS domain S-box; InterPro IPR000014:IPR013655; KEGG: cpi:Cpin_1033 TPR repeat-containing protein; PFAM: PAS fold-3; SMART: PAS; SPTR: Tetratricopeptide repeat domain protein; TIGRFAM: PAS; PAS sensor protein 2785209 11055368 Murru_2519 Muricauda ruestringensis DSM 13258 PAS sensor protein YP_004788978.1 2784295 R 886377 CDS YP_004788979.1 344203836 11055369 2785426..2785614 1 NC_015945.1 hypothetical protein 2785614 11055369 Murru_2520 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788979.1 2785426 D 886377 CDS YP_004788980.1 344203837 11055370 2785559..2787178 1 NC_015945.1 InterPro IPR001611; KEGG: lmo:lmo0331 hypothetical protein; PFAM: Leucine-rich repeat; SPTR: Internalin-related protein; hypothetical protein 2787178 11055370 Murru_2521 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788980.1 2785559 D 886377 CDS YP_004788981.1 344203838 11055371 2787293..2788579 1 NC_015945.1 PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: rbi:RB2501_14374 putative beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Putative beta-lactamase; beta-lactamase 2788579 11055371 Murru_2522 Muricauda ruestringensis DSM 13258 beta-lactamase YP_004788981.1 2787293 D 886377 CDS YP_004788982.1 344203839 11055372 2788782..2790350 1 NC_015945.1 KEGG: fjo:Fjoh_1188 hypothetical protein; SPTR: Internalin-related protein; hypothetical protein 2790350 11055372 Murru_2523 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788982.1 2788782 D 886377 CDS YP_004788983.1 344203840 11055373 complement(2790595..2791866) 1 NC_015945.1 KEGG: dfe:Dfer_2270 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2791866 11055373 Murru_2524 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788983.1 2790595 R 886377 CDS YP_004788984.1 344203841 11055374 2791996..2793363 1 NC_015945.1 KEGG: sus:Acid_5342 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2793363 11055374 Murru_2525 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788984.1 2791996 D 886377 CDS YP_004788985.1 344203842 11055375 2793569..2794108 1 NC_015945.1 PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: lby:Lbys_2111 helix-TurN-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; helix-turn-helix domain-containing protein 2794108 11055375 Murru_2526 Muricauda ruestringensis DSM 13258 helix-turn-helix domain-containing protein YP_004788985.1 2793569 D 886377 CDS YP_004788986.1 344203843 11055376 2794213..2795682 1 NC_015945.1 PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: kko:Kkor_1240 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase 2795682 11055376 Murru_2527 Muricauda ruestringensis DSM 13258 beta-lactamase YP_004788986.1 2794213 D 886377 CDS YP_004788987.1 344203844 11055377 2796311..2798047 1 NC_015945.1 PFAM: Predicted permease; InterPro IPR003838; KEGG: cpi:Cpin_3610 protein of unknown function DUF214; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative uncharacterized protein; hypothetical protein 2798047 11055377 Murru_2528 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788987.1 2796311 D 886377 CDS YP_004788988.1 344203845 11055378 2798151..2799833 1 NC_015945.1 PFAM: Beta-lactamase; Fibrobacter succinogenes major domain (Fib_succ_major); TIGRFAM: Fibrobacter succinogenes major paralogous domain; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR011871:IPR001466; KEGG: mtt:Ftrac_1319 beta-lactamase; SPTR: Putative uncharacterized protein; hypothetical protein 2799833 11055378 Murru_2529 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788988.1 2798151 D 886377 CDS YP_004788989.1 344203846 11055379 2799965..2801662 1 NC_015945.1 PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: ava:Ava_1520 beta-lactamase; PFAM: Beta-lactamase-related; PRIAM: D-stereospecific aminopeptidase; SPTR: Beta-lactamase; D-stereospecific aminopeptidase 2801662 11055379 Murru_2530 Muricauda ruestringensis DSM 13258 D-stereospecific aminopeptidase YP_004788989.1 2799965 D 886377 CDS YP_004788990.1 344203847 11055381 complement(2802423..2803115) 1 NC_015945.1 PFAM: N-acetylmuramoyl-L-alanine amidase; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: gfo:GFO_1368 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: N-acetylmuramoyl-L-alanine amidase; cell wall hydrolase/autolysin 2803115 11055381 Murru_2532 Muricauda ruestringensis DSM 13258 cell wall hydrolase/autolysin YP_004788990.1 2802423 R 886377 CDS YP_004788991.1 344203848 11055382 2803282..2803569 1 NC_015945.1 KEGG: gfo:GFO_1367 membrane protein; SPTR: Putative uncharacterized protein; membrane protein 2803569 11055382 Murru_2533 Muricauda ruestringensis DSM 13258 membrane protein YP_004788991.1 2803282 D 886377 CDS YP_004788992.1 344203849 11055383 2803571..2803849 1 NC_015945.1 KEGG: gfo:GFO_1366 membrane protein; SPTR: Membrane protein; membrane protein 2803849 11055383 Murru_2534 Muricauda ruestringensis DSM 13258 membrane protein YP_004788992.1 2803571 D 886377 CDS YP_004788993.1 344203850 11055384 2803842..2806256 1 NC_015945.1 PFAM: Domain of unknown function DUF87; TIGRFAM: Bacteroides conjugation system ATPase, TraG family; COGs: COG3451 Type IV secretory pathway VirB4 protein; InterPro IPR022509; KEGG: zpr:ZPR_1269 type IV secretory pathway, VirB4 component; SPTR: Type IV secretory pathway, VirB4 component; TIGRFAM: Conjugation system ATPase, TraG; conjugation system ATPase, TraG family 2806256 11055384 Murru_2535 Muricauda ruestringensis DSM 13258 conjugation system ATPase, TraG family YP_004788993.1 2803842 D 886377 CDS YP_004788994.1 344203851 11055385 2806253..2806858 1 NC_015945.1 PFAM: Type IV secretion system proteins; KEGG: zpr:ZPR_1268 conserved protein found in conjugate transposon; SPTR: Conserved protein found in conjugate transposon; conjugate transposon protein 2806858 11055385 Murru_2536 Muricauda ruestringensis DSM 13258 conjugate transposon protein YP_004788994.1 2806253 D 886377 CDS YP_004788995.1 344203852 11055386 2806865..2807695 1 NC_015945.1 KEGG: zpr:ZPR_1267 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2807695 11055386 Murru_2537 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004788995.1 2806865 D 886377 CDS YP_004788996.1 344203853 11055387 2807753..2808379 1 NC_015945.1 KEGG: zpr:ZPR_1266 conserved protein found in conjugate transposon; SPTR: Conserved protein found in conjugate transposon; conjugate transposon protein 2808379 11055387 Murru_2538 Muricauda ruestringensis DSM 13258 conjugate transposon protein YP_004788996.1 2807753 D 886377 CDS YP_004788997.1 344203854 11055388 2808360..2809307 1 NC_015945.1 PFAM: Protein of unknown function (DUF3714); KEGG: zpr:ZPR_1265 conjugative transposon protein TraM; SPTR: Conjugative transposon protein TraM; conjugative transposon protein TraM 2809307 11055388 Murru_2539 Muricauda ruestringensis DSM 13258 conjugative transposon protein TraM YP_004788997.1 2808360 D 886377 CDS YP_004788998.1 344203855 11055389 2809318..2810115 1 NC_015945.1 KEGG: zpr:ZPR_1264 conserved protein found in conjugate transposon; SPTR: Conserved protein found in conjugate transposon; conjugate transposon protein 2810115 11055389 Murru_2540 Muricauda ruestringensis DSM 13258 conjugate transposon protein YP_004788998.1 2809318 D 886377 CDS YP_004788999.1 344203856 11055390 2810236..2810892 1 NC_015945.1 PFAM: Response regulator receiver domain; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789; KEGG: cat:CA2559_08901 putative nitrate/nitrite DNA-binding response regulator; PFAM: Signal transduction response regulator, receiver domain; SPTR: Putative nitrate/nitrite DNA-binding response regulator; response regulator receiver protein 2810892 11055390 Murru_2541 Muricauda ruestringensis DSM 13258 response regulator receiver protein YP_004788999.1 2810236 D 886377 CDS YP_004789000.1 344203857 11055391 2811164..2812510 1 NC_015945.1 PFAM: Sel1 repeat; COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterPro IPR006597; KEGG: lsp:Bsph_0642 suppressor of lin-12-like protein (Sel-1L); PFAM: Sel1-like; SMART: Sel1-like; SPTR: Putative uncharacterized protein; Sel1 domain-containing protein repeat-containing protein 2812510 11055391 Murru_2542 Muricauda ruestringensis DSM 13258 Sel1 domain-containing protein repeat-containing protein YP_004789000.1 2811164 D 886377 CDS YP_004789001.1 344203858 11055392 2812521..2814599 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 2814599 11055392 Murru_2543 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789001.1 2812521 D 886377 CDS YP_004789002.1 344203859 11055393 2814577..2815290 1 NC_015945.1 KEGG: fba:FIC_00903 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2815290 11055393 Murru_2544 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789002.1 2814577 D 886377 CDS YP_004789003.1 344203860 11055394 2815868..2817118 1 NC_015945.1 PFAM: Phage integrase family; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: cat:CA2559_11843 putative transposase; PFAM: Integrase, catalytic core, phage; SPTR: Putative transposase; integrase family protein 2817118 11055394 Murru_2545 Muricauda ruestringensis DSM 13258 integrase family protein YP_004789003.1 2815868 D 886377 CDS YP_004789004.1 344203861 11055395 complement(2817183..2817398) 1 NC_015945.1 hypothetical protein 2817398 11055395 Murru_2546 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789004.1 2817183 R 886377 CDS YP_004789005.1 344203862 11055396 2817475..2818023 1 NC_015945.1 KEGG: phe:Phep_2691 RNA polymerase sigma factor, sigma-70 family; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; sigma-70 family RNA polymerase sigma factor 2818023 11055396 Murru_2547 Muricauda ruestringensis DSM 13258 sigma-70 family RNA polymerase sigma factor YP_004789005.1 2817475 D 886377 CDS YP_004789006.1 344203863 11055397 2818004..2818273 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 2818273 11055397 Murru_2548 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789006.1 2818004 D 886377 CDS YP_004789007.1 344203864 11055398 2818270..2818923 1 NC_015945.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; COGs: COG0740 Protease subunit of ATP-dependent Clp protease; HAMAP: Peptidase S14, ClpP; InterPro IPR001907; KEGG: chl:Chy400_1660 endopeptidase Clp; PFAM: Peptidase S14, ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit 1; ATP-dependent Clp protease proteolytic subunit 2818923 11055398 Murru_2549 Muricauda ruestringensis DSM 13258 ATP-dependent Clp protease proteolytic subunit YP_004789007.1 2818270 D 886377 CDS YP_004789008.1 344203865 11055399 2819331..2821127 1 NC_015945.1 PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115:IPR004437; KEGG: zpr:ZPR_1757 putative partitioning protein; PFAM: ParB-like nuclease; SMART: ParB-like nuclease; SPTR: Putative partitioning protein; TIGRFAM: ParB-like partition protein; parB-like partition protein 2821127 11055399 Murru_2550 Muricauda ruestringensis DSM 13258 parB-like partition protein YP_004789008.1 2819331 D 886377 CDS YP_004789009.1 344203866 11055400 complement(2821175..2821933) 1 NC_015945.1 PFAM: Uncharacterised ACR, COG2135; COGs: COG2135 conserved hypothetical protein; InterPro IPR003738; KEGG: fbc:FB2170_11741 hypothetical protein; PFAM: Protein of unknown function DUF159; SPTR: Putative uncharacterized protein; hypothetical protein 2821933 11055400 Murru_2551 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789009.1 2821175 R 886377 CDS YP_004789010.1 344203867 11055401 2822052..2823266 1 NC_015945.1 PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; HAMAP: DNA polymerase IV; InterPro IPR001126:IPR022880; KEGG: fbc:FB2170_04080 DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like; PRIAM: DNA-directed DNA polymerase; SPTR: DNA polymerase IV 2; DNA polymerase IV 2823266 11055401 Murru_2552 Muricauda ruestringensis DSM 13258 DNA polymerase IV YP_004789010.1 2822052 D 886377 CDS YP_004789011.1 344203868 11055402 2823266..2826244 1 NC_015945.1 PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; TIGRFAM: DNA-directed DNA polymerase III (polc); COGs: COG0587 DNA polymerase III alpha subunit; InterPro IPR003141:IPR004805:IPR004013:IPR011708; KEGG: rbi:RB2501_04555 DNA polymerase III subunit alpha; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; PRIAM: DNA-directed DNA polymerase; SMART: Polymerase/histidinol phosphatase, N-terminal; SPTR: DNA polymerase III alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; DNA polymerase III subunit alpha 2826244 11055402 Murru_2553 Muricauda ruestringensis DSM 13258 DNA polymerase III subunit alpha YP_004789011.1 2823266 D 886377 CDS YP_004789012.1 344203869 11055403 2826505..2827179 1 NC_015945.1 hypothetical protein 2827179 11055403 Murru_2554 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789012.1 2826505 D 886377 CDS YP_004789013.1 344203870 11055404 2827730..2828164 1 NC_015945.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR011344:IPR000424; KEGG: fps:FP0083 hypothetical protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; single-strand binding protein 2828164 11055404 Murru_2555 Muricauda ruestringensis DSM 13258 single-strand binding protein YP_004789013.1 2827730 D 886377 CDS YP_004789014.1 344203871 11055405 2828232..2828681 1 NC_015945.1 PFAM: Protein of unknown function (DUF2466); COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: zpr:ZPR_4133 putative DNA repair protein; PFAM: Uncharacterised protein family UPF0758; SPTR: Putative DNA repair protein; DNA repair protein RadC 2828681 11055405 Murru_2556 Muricauda ruestringensis DSM 13258 DNA repair protein RadC YP_004789014.1 2828232 D 886377 CDS YP_004789015.1 344203872 11055406 2829103..2829690 1 NC_015945.1 KEGG: gfo:GFO_1354 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2829690 11055406 Murru_2557 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789015.1 2829103 D 886377 CDS YP_004789016.1 344203873 11055407 2829693..2830712 1 NC_015945.1 KEGG: gfo:GFO_1355 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2830712 11055407 Murru_2558 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789016.1 2829693 D 886377 CDS YP_004789017.1 344203874 11055408 2830724..2832319 1 NC_015945.1 PFAM: Type IV secretion-system coupling protein DNA-binding domain; COGs: COG3505 Type IV secretory pathway VirD4 protein; KEGG: zpr:ZPR_4129 mobilisation protein C; SPTR: Mobilisation protein C; mobilization protein C 2832319 11055408 Murru_2559 Muricauda ruestringensis DSM 13258 mobilization protein C YP_004789017.1 2830724 D 886377 CDS YP_004789018.1 344203875 11055409 complement(2832334..2833104) 1 NC_015945.1 KEGG: zpr:ZPR_1613 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2833104 11055409 Murru_2560 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789018.1 2832334 R 886377 CDS YP_004789019.1 344203876 11055410 2833488..2833664 1 NC_015945.1 hypothetical protein 2833664 11055410 Murru_2561 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789019.1 2833488 D 886377 CDS YP_004789020.1 344203877 11055411 2833739..2835682 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: gfo:GFO_2620 two-component system sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; SPTR: Putative transmembrane protein; putative signal transduction histidine kinase 2835682 11055411 Murru_2562 Muricauda ruestringensis DSM 13258 putative signal transduction histidine kinase YP_004789020.1 2833739 D 886377 CDS YP_004789021.1 344203878 11055412 2835697..2836362 1 NC_015945.1 COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; KEGG: gfo:GFO_2621 response regulator receiver domain-containing protein; SPTR: Putative uncharacterized protein; response regulator receiver protein 2836362 11055412 Murru_2563 Muricauda ruestringensis DSM 13258 response regulator receiver protein YP_004789021.1 2835697 D 886377 CDS YP_004789022.1 344203879 11055413 2836466..2836849 1 NC_015945.1 PFAM: PEGA domain; InterPro IPR013229; KEGG: pgn:PGN_0758 hypothetical protein; PFAM: PEGA; SPTR: Lipoprotein, putative; PEGA domain-containing protein 2836849 11055413 Murru_2564 Muricauda ruestringensis DSM 13258 PEGA domain-containing protein YP_004789022.1 2836466 D 886377 CDS YP_004789023.1 344203880 11055414 2837005..2837163 1 NC_015945.1 KEGG: vfi:VF_2604 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2837163 11055414 Murru_2565 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789023.1 2837005 D 886377 CDS YP_004789024.1 344203881 11055415 2837175..2837444 1 NC_015945.1 KEGG: nca:Noca_4656 hypothetical protein; SPTR: Putative uncharacterized protein gp05; hypothetical protein 2837444 11055415 Murru_2566 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789024.1 2837175 D 886377 CDS YP_004789025.1 344203882 11055416 2837449..2838498 1 NC_015945.1 PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); COGs: COG4748 conserved hypothetical protein; InterPro IPR007409; KEGG: zpr:ZPR_1621 restriction endonuclease; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; SPTR: Restriction endonuclease; Restriction endonuclease, type I, EcoRI, R subunit/Type III 2838498 11055416 Murru_2567 Muricauda ruestringensis DSM 13258 Restriction endonuclease, type I, EcoRI, R subunit/Type III YP_004789025.1 2837449 D 886377 CDS YP_004789026.1 344203883 11055417 2838488..2838715 1 NC_015945.1 KEGG: fba:FIC_01679 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2838715 11055417 Murru_2568 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789026.1 2838488 D 886377 CDS YP_004789027.1 344203884 11055418 complement(2838724..2839536) 1 NC_015945.1 PFAM: Endonuclease/Exonuclease/phosphatase family; InterPro IPR008185:IPR005135; KEGG: fjo:Fjoh_0034 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SMART: Deoxyribonuclease I, eukaryotic; SPTR: Endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 2839536 11055418 Murru_2569 Muricauda ruestringensis DSM 13258 endonuclease/exonuclease/phosphatase YP_004789027.1 2838724 R 886377 CDS YP_004789028.1 344203885 11055419 2839673..2840437 1 NC_015945.1 KEGG: zpr:ZPR_3306 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2840437 11055419 Murru_2570 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789028.1 2839673 D 886377 CDS YP_004789029.1 344203886 11055420 2840510..2840872 1 NC_015945.1 KEGG: rbi:RB2501_06215 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2840872 11055420 Murru_2571 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789029.1 2840510 D 886377 CDS YP_004789030.1 344203887 11055421 2841490..2843703 1 NC_015945.1 PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm); COGs: COG0270 Site-specific DNA methylase; InterPro IPR001525; KEGG: cat:CA2559_00245 site-specific DNA-methyltransferase; PFAM: C-5 cytosine methyltransferase; SPTR: Cytosine-specific methyltransferase; TIGRFAM: C-5 cytosine methyltransferase; DNA-cytosine methyltransferase 2843703 11055421 Murru_2572 Muricauda ruestringensis DSM 13258 DNA-cytosine methyltransferase YP_004789030.1 2841490 D 886377 CDS YP_004789031.1 344203888 11055422 2843700..2844878 1 NC_015945.1 KEGG: cat:CA2559_00250 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2844878 11055422 Murru_2573 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789031.1 2843700 D 886377 CDS YP_004789032.1 344203889 11055423 complement(2845110..2846891) 1 NC_015945.1 PFAM: Uncharacterized conserved protein (DUF2081); Protein of unknown function DUF262; COGs: COG3472 conserved hypothetical protein; InterPro IPR004919:IPR018651; KEGG: has:Halsa_1042 protein of unknown function DUF2081; PFAM: Domain of unknown function DUF262; Protein of unknown function DUF2081; SPTR: Putative uncharacterized protein; hypothetical protein 2846891 11055423 Murru_2574 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789032.1 2845110 R 886377 CDS YP_004789033.1 344203890 11055424 complement(2846979..2848514) 1 NC_015945.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG3666 Transposase and inactivated derivatives; InterPro IPR002559; KEGG: zpr:ZPR_3275 ISCps6, transposase; PFAM: Transposase, IS4-like; SPTR: ISCps6, transposase; transposase IS4 family protein 2848514 11055424 Murru_2575 Muricauda ruestringensis DSM 13258 transposase IS4 family protein YP_004789033.1 2846979 R 886377 CDS YP_004789034.1 344203891 11055425 complement(2848778..2849737) 1 NC_015945.1 KEGG: fjo:Fjoh_3594 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2849737 11055425 Murru_2576 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789034.1 2848778 R 886377 CDS YP_004789035.1 344203892 11055426 complement(2850205..2850459) 1 NC_015945.1 KEGG: zpr:ZPR_2241 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2850459 11055426 Murru_2577 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789035.1 2850205 R 886377 CDS YP_004789036.1 344203893 11055427 2851202..2854231 1 NC_015945.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: fjo:Fjoh_4373 TonB-dependent receptor, plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein, probably involved in nutrient binding; TonB-dependent receptor plug 2854231 11055427 Murru_2578 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004789036.1 2851202 D 886377 CDS YP_004789037.1 344203894 11055428 2854247..2855683 1 NC_015945.1 PFAM: SusD family; InterPro IPR012944; KEGG: fjo:Fjoh_3036 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 2855683 11055428 Murru_2579 Muricauda ruestringensis DSM 13258 RagB/SusD domain-containing protein YP_004789037.1 2854247 D 886377 CDS YP_004789038.1 344203895 11055429 2855764..2858073 1 NC_015945.1 KEGG: sus:Acid_7167 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2858073 11055429 Murru_2580 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789038.1 2855764 D 886377 CDS YP_004789039.1 344203896 11055430 complement(2858196..2858444) 1 NC_015945.1 hypothetical protein 2858444 11055430 Murru_2581 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789039.1 2858196 R 886377 CDS YP_004789040.1 344203897 11055431 complement(2858515..2858952) 1 NC_015945.1 PFAM: Methylamine utilisation protein MauE; KEGG: cpi:Cpin_5558 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2858952 11055431 Murru_2582 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789040.1 2858515 R 886377 CDS YP_004789041.1 344203898 11055432 complement(2859049..2859975) 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: gfo:GFO_1378 AraC family transcription regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: AraC family transcriptional regulator protein; AraC family transcriptional regulator 2859975 11055432 Murru_2583 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004789041.1 2859049 R 886377 CDS YP_004789042.1 344203899 11055433 complement(2859994..2860380) 1 NC_015945.1 KEGG: zpr:ZPR_3448 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2860380 11055433 Murru_2584 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789042.1 2859994 R 886377 CDS YP_004789043.1 344203900 11055434 2860579..2862984 1 NC_015945.1 PFAM: Aminotransferase class I and II; COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839; KEGG: gfo:GFO_1376 class-I/II aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: 8-amino-7-oxononanoate synthase; SPTR: Class-I/II aminotransferase; 8-amino-7-oxononanoate synthase 2862984 11055434 Murru_2585 Muricauda ruestringensis DSM 13258 8-amino-7-oxononanoate synthase YP_004789043.1 2860579 D 886377 CDS YP_004789044.1 344203901 11055435 2862997..2863836 1 NC_015945.1 PFAM: RteC protein; InterPro IPR018534; KEGG: fps:FP1540 hypothetical protein; PFAM: Tetracycline regulation of excision, RteC; SPTR: Putative uncharacterized protein; Tetracycline regulation of excision, RteC 2863836 11055435 Murru_2586 Muricauda ruestringensis DSM 13258 Tetracycline regulation of excision, RteC YP_004789044.1 2862997 D 886377 CDS YP_004789045.1 344203902 11055436 2864123..2864401 1 NC_015945.1 KEGG: zpr:ZPR_2233 putative DNA-binding protein; SPTR: Putative DNA-binding protein; putative DNA-binding protein 2864401 11055436 Murru_2587 Muricauda ruestringensis DSM 13258 putative DNA-binding protein YP_004789045.1 2864123 D 886377 CDS YP_004789046.1 344203903 11055437 2864404..2864943 1 NC_015945.1 KEGG: zpr:ZPR_1275 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2864943 11055437 Murru_2588 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789046.1 2864404 D 886377 CDS YP_004789047.1 344203904 11055438 2864940..2865602 1 NC_015945.1 KEGG: zpr:ZPR_1274 ATPase; SPTR: ATPase; ATPase 2865602 11055438 Murru_2589 Muricauda ruestringensis DSM 13258 ATPase YP_004789047.1 2864940 D 886377 CDS YP_004789048.1 344203905 11055439 2865605..2865880 1 NC_015945.1 hypothetical protein 2865880 11055439 Murru_2590 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789048.1 2865605 D 886377 CDS YP_004789049.1 344203906 11055440 complement(2866040..2866957) 1 NC_015945.1 PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase; COGs: COG1893 Ketopantoate reductase; InterPro IPR003710:IPR013332:IPR013752; KEGG: sli:Slin_2608 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, C-terminal; Ketopantoate reductase ApbA/PanE, N-terminal; SPTR: 2-dehydropantoate 2-reductase; TIGRFAM: Ketopantoate reductase ApbA/PanE; 2-dehydropantoate 2-reductase 2866957 11055440 Murru_2591 Muricauda ruestringensis DSM 13258 2-dehydropantoate 2-reductase YP_004789049.1 2866040 R 886377 CDS YP_004789050.1 344203907 11055441 complement(2866997..2867644) 1 NC_015945.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR006402:IPR006439:IPR005834; KEGG: vex:VEA_000391 2-deoxyglucose-6-phosphate hydrolase YniC; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Phosphatase YniC; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase 2867644 11055441 Murru_2592 Muricauda ruestringensis DSM 13258 HAD-superfamily hydrolase YP_004789050.1 2866997 R 886377 CDS YP_004789051.1 344203908 11055442 complement(2867635..2868285) 1 NC_015945.1 PFAM: TENA/THI-4/PQQC family; COGs: COG0819 Putative transcription activator; InterPro IPR004305; KEGG: zpr:ZPR_1973 putative transcriptional activator (TenA family protein); PFAM: TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C; SPTR: Putative transcriptional activator (TenA family protein); TenA family transcriptional activator 2868285 11055442 Murru_2593 Muricauda ruestringensis DSM 13258 TenA family transcriptional activator YP_004789051.1 2867635 R 886377 CDS YP_004789052.1 344203909 11055443 complement(2868272..2869105) 1 NC_015945.1 PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; COGs: COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; InterPro IPR004399:IPR013749; KEGG: zpr:ZPR_1974 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; PRIAM: Phosphomethylpyrimidine kinase; SPTR: Phosphomethylpyrimidine kinase; TIGRFAM: Phosphomethylpyrimidine kinase type-2; phosphomethylpyrimidine kinase 2869105 11055443 Murru_2594 Muricauda ruestringensis DSM 13258 phosphomethylpyrimidine kinase YP_004789052.1 2868272 R 886377 CDS YP_004789053.1 344203910 11055444 complement(2869102..2869740) 1 NC_015945.1 PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase; COGs: COG0352 Thiamine monophosphate synthase; HAMAP: Thiamine monophosphate synthase; InterPro IPR003733; KEGG: zpr:ZPR_1975 thiamine-phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase; SPTR: Thiamine-phosphate pyrophosphorylase 1; TIGRFAM: Thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 2869740 11055444 Murru_2595 Muricauda ruestringensis DSM 13258 thiamine-phosphate pyrophosphorylase YP_004789053.1 2869102 R 886377 CDS YP_004789054.1 344203911 11055445 complement(2869737..2870540) 1 NC_015945.1 PFAM: Hydroxyethylthiazole kinase family; TIGRFAM: hydroxyethylthiazole kinase; COGs: COG2145 Hydroxyethylthiazole kinase sugar kinase family; HAMAP: Hydroxyethylthiazole kinase; InterPro IPR000417; KEGG: zpr:ZPR_1976 hydroxyethylthiazole kinase; PFAM: Hydroxyethylthiazole kinase; PRIAM: Hydroxyethylthiazole kinase; SPTR: Hydroxyethylthiazole kinase; TIGRFAM: Hydroxyethylthiazole kinase; hydroxyethylthiazole kinase 2870540 11055445 Murru_2596 Muricauda ruestringensis DSM 13258 hydroxyethylthiazole kinase YP_004789054.1 2869737 R 886377 CDS YP_004789055.1 344203912 11055446 2871058..2871345 1 NC_015945.1 KEGG: zpr:ZPR_4001 membrane protein; SPTR: Putative uncharacterized protein; membrane protein 2871345 11055446 Murru_2597 Muricauda ruestringensis DSM 13258 membrane protein YP_004789055.1 2871058 D 886377 CDS YP_004789056.1 344203913 11055447 2871345..2871623 1 NC_015945.1 KEGG: gfo:GFO_1366 membrane protein; SPTR: Membrane protein; membrane protein 2871623 11055447 Murru_2598 Muricauda ruestringensis DSM 13258 membrane protein YP_004789056.1 2871345 D 886377 CDS YP_004789057.1 344203914 11055448 2871616..2874027 1 NC_015945.1 PFAM: Domain of unknown function DUF87; TIGRFAM: Bacteroides conjugation system ATPase, TraG family; COGs: COG3451 Type IV secretory pathway VirB4 protein; InterPro IPR022509; KEGG: zpr:ZPR_1269 type IV secretory pathway, VirB4 component; SPTR: Type IV secretory pathway, VirB4 component; TIGRFAM: Conjugation system ATPase, TraG; conjugation system ATPase, TraG family 2874027 11055448 Murru_2599 Muricauda ruestringensis DSM 13258 conjugation system ATPase, TraG family YP_004789057.1 2871616 D 886377 CDS YP_004789058.1 344203915 11055449 2874024..2874629 1 NC_015945.1 PFAM: Type IV secretion system proteins; KEGG: gfo:GFO_1364 TraI-like secreted protein; SPTR: TraI-like secreted protein; TraI-like secreted protein 2874629 11055449 Murru_2600 Muricauda ruestringensis DSM 13258 TraI-like secreted protein YP_004789058.1 2874024 D 886377 CDS YP_004789059.1 344203916 11055450 2874629..2875468 1 NC_015945.1 KEGG: zpr:ZPR_1267 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2875468 11055450 Murru_2601 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789059.1 2874629 D 886377 CDS YP_004789060.1 344203917 11055451 2875481..2876107 1 NC_015945.1 KEGG: zpr:ZPR_1266 conserved protein found in conjugate transposon; SPTR: Conserved protein found in conjugate transposon; conjugate transposon protein 2876107 11055451 Murru_2602 Muricauda ruestringensis DSM 13258 conjugate transposon protein YP_004789060.1 2875481 D 886377 CDS YP_004789061.1 344203918 11055452 2876088..2877020 1 NC_015945.1 PFAM: Protein of unknown function (DUF3714); KEGG: zpr:ZPR_1771 TraM-like protein; SPTR: TraM-like protein; TraM-like protein 2877020 11055452 Murru_2603 Muricauda ruestringensis DSM 13258 TraM-like protein YP_004789061.1 2876088 D 886377 CDS YP_004789062.1 344203919 11055453 2877017..2877808 1 NC_015945.1 KEGG: zpr:ZPR_1264 conserved protein found in conjugate transposon; SPTR: Conserved protein found in conjugate transposon; conjugate transposon protein 2877808 11055453 Murru_2604 Muricauda ruestringensis DSM 13258 conjugate transposon protein YP_004789062.1 2877017 D 886377 CDS YP_004789063.1 344203920 11055455 complement(2878758..2879678) 1 NC_015945.1 KEGG: fbc:FB2170_04820 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2879678 11055455 Murru_2606 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789063.1 2878758 R 886377 CDS YP_004789064.1 344203921 11055456 complement(2879668..2880255) 1 NC_015945.1 PFAM: YceI-like domain; InterPro IPR007372; KEGG: fbc:FB2170_04825 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: Putative uncharacterized protein; hypothetical protein 2880255 11055456 Murru_2607 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789064.1 2879668 R 886377 CDS YP_004789065.1 344203922 11055457 complement(2880206..2880643) 1 NC_015945.1 KEGG: fbc:FB2170_04830 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2880643 11055457 Murru_2608 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789065.1 2880206 R 886377 CDS YP_004789066.1 344203923 11055458 complement(2880750..2881991) 1 NC_015945.1 PFAM: Secreted repeat of unknown function; COGs: COG4315 conserved hypothetical protein; InterPro IPR005297; KEGG: fbc:FB2170_04840 putative lipoprotein; SPTR: Putative lipoprotein; hypothetical protein 2881991 11055458 Murru_2609 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789066.1 2880750 R 886377 CDS YP_004789067.1 344203924 11055459 complement(2882119..2882988) 1 NC_015945.1 KEGG: rbi:RB2501_00251 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2882988 11055459 Murru_2610 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789067.1 2882119 R 886377 CDS YP_004789068.1 344203925 11055460 complement(2882997..2883386) 1 NC_015945.1 KEGG: fjo:Fjoh_0164 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2883386 11055460 Murru_2611 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789068.1 2882997 R 886377 CDS YP_004789069.1 344203926 11055461 complement(2883376..2883951) 1 NC_015945.1 PFAM: YceI-like domain; InterPro IPR007372; KEGG: fjo:Fjoh_0167 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like; SPTR: Putative uncharacterized protein; hypothetical protein 2883951 11055461 Murru_2612 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789069.1 2883376 R 886377 CDS YP_004789070.1 344203927 11055462 complement(2883970..2884338) 1 NC_015945.1 KEGG: fjo:Fjoh_0166 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2884338 11055462 Murru_2613 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789070.1 2883970 R 886377 CDS YP_004789071.1 344203928 11055463 2884554..2885621 1 NC_015945.1 PFAM: LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR007492; KEGG: fbc:FB2170_04845 two-component system response regulator; PFAM: LytTr, DNA-binding domain; SMART: LytTr, DNA-binding domain; SPTR: Transcriptional regulator, LytTr family; response regulator receiver protein 2885621 11055463 Murru_2614 Muricauda ruestringensis DSM 13258 response regulator receiver protein YP_004789071.1 2884554 D 886377 CDS YP_004789072.1 344203929 11055464 2885791..2886003 1 NC_015945.1 hypothetical protein 2886003 11055464 Murru_2615 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789072.1 2885791 D 886377 CDS YP_004789073.1 344203930 11055465 2886094..2886990 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: fjo:Fjoh_0873 LysR family transcriptional regulator; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; SPTR: Transcriptional regulator, LysR family; LysR family transcriptional regulator 2886990 11055465 Murru_2616 Muricauda ruestringensis DSM 13258 LysR family transcriptional regulator YP_004789073.1 2886094 D 886377 CDS YP_004789074.1 344203931 11055466 2887026..2887661 1 NC_015945.1 PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; COGs: COG0450 Peroxiredoxin; InterPro IPR000866:IPR019479; KEGG: phe:Phep_2928 peroxidase; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Peroxiredoxin, C-terminal; PRIAM: Peroxidase; SPTR: Peroxidase; peroxidase 2887661 11055466 Murru_2617 Muricauda ruestringensis DSM 13258 peroxidase YP_004789074.1 2887026 D 886377 CDS YP_004789075.1 344203932 11055467 2887658..2889445 1 NC_015945.1 PFAM: Flavodoxin; FAD binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha-component; COGs: COG0369 Sulfite reductase alpha subunit (flavoprotein); InterPro IPR010199:IPR008254:IPR003097:IPR001433; KEGG: bay:RBAM_030610 YvgR; PFAM: FAD-binding, type 1; Flavodoxin/nitric oxide synthase; Oxidoreductase FAD/NAD(P)-binding; PRIAM: NADPH--hemoprotein reductase; SPTR: Sulfite reductase [NADPH] flavoprotein, alpha-component; TIGRFAM: Sulphite reductase [NADPH] flavoprotein, alpha chain; sulfite reductase (NADPH) flavoprotein, alpha chain 2889445 11055467 Murru_2618 Muricauda ruestringensis DSM 13258 sulfite reductase (NADPH) flavoprotein, alpha chain YP_004789075.1 2887658 D 886377 CDS YP_004789076.1 344203933 11055468 2889459..2891123 1 NC_015945.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase (NADPH) hemoprotein, beta-component; COGs: COG0155 Sulfite reductase beta subunit (hemoprotein); InterPro IPR011786:IPR005117:IPR006067; KEGG: afl:Aflv_1596 sulfite reductase subunit beta; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; PRIAM: Sulfite reductase (NADPH); SPTR: Sulfite reductase [NADPH] hemoprotein beta-component; TIGRFAM: Sulphite reductase (NADPH) hemoprotein, beta subunit; sulfite reductase (NADPH) hemoprotein subunit beta 2891123 11055468 Murru_2619 Muricauda ruestringensis DSM 13258 sulfite reductase (NADPH) hemoprotein subunit beta YP_004789076.1 2889459 D 886377 CDS YP_004789077.1 344203934 11055469 2891142..2892293 1 NC_015945.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: fbc:FB2170_10581 cystathionine beta-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; SPTR: Cystathionine beta-lyase; cys/Met metabolism pyridoxal-phosphate-dependent protein 2892293 11055469 Murru_2620 Muricauda ruestringensis DSM 13258 cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004789077.1 2891142 D 886377 CDS YP_004789078.1 344203935 11055470 2892384..2893673 1 NC_015945.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase; COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterPro IPR006235:IPR000277; KEGG: gfo:GFO_0316 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cysteine synthase; SPTR: O-acetylhomoserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; O-acetylhomoserine/O-acetylserine sulfhydrylase 2893673 11055470 Murru_2621 Muricauda ruestringensis DSM 13258 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_004789078.1 2892384 D 886377 CDS YP_004789079.1 344203936 11055471 2893684..2894616 1 NC_015945.1 PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase; COGs: COG1893 Ketopantoate reductase; InterPro IPR003710:IPR013332:IPR013752; KEGG: gfo:GFO_3033 ketopantoate reductase PanE/ApbA; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; PRIAM: 2-dehydropantoate 2-reductase; SPTR: 2-dehydropantoate 2-reductase; TIGRFAM: Ketopantoate reductase ApbA/PanE; 2-dehydropantoate 2-reductase 2894616 11055471 Murru_2622 Muricauda ruestringensis DSM 13258 2-dehydropantoate 2-reductase YP_004789079.1 2893684 D 886377 CDS YP_004789080.1 344203937 11055472 complement(2894835..2895614) 1 NC_015945.1 KEGG: cat:CA2559_05660 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2895614 11055472 Murru_2623 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789080.1 2894835 R 886377 CDS YP_004789081.1 344203938 11055473 complement(2895628..2897130) 1 NC_015945.1 KEGG: sli:Slin_1165 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2897130 11055473 Murru_2624 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789081.1 2895628 R 886377 CDS YP_004789082.1 344203939 11055474 complement(2897140..2900220) 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: cat:CA2559_05670 outer membrane protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein, probably involved in nutrient binding; TonB-dependent receptor plug 2900220 11055474 Murru_2625 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004789082.1 2897140 R 886377 CDS YP_004789083.1 344203940 11055475 complement(2900235..2900471) 1 NC_015945.1 hypothetical protein 2900471 11055475 Murru_2626 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789083.1 2900235 R 886377 CDS YP_004789084.1 344203941 11055476 complement(2900722..2901666) 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR018060:IPR000005; KEGG: fbc:FB2170_01247 DNA binding protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Putative uncharacterized protein; AraC family transcriptional regulator 2901666 11055476 Murru_2627 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004789084.1 2900722 R 886377 CDS YP_004789085.1 344203942 11055477 complement(2901931..2902323) 1 NC_015945.1 COGs: COG2346 Truncated hemoglobins; KEGG: rbi:RB2501_10787 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2902323 11055477 Murru_2628 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789085.1 2901931 R 886377 CDS YP_004789086.1 344203943 11055478 complement(2902445..2902804) 1 NC_015945.1 PFAM: Protein of unknown function, DUF488; COGs: COG3189 conserved hypothetical protein; InterPro IPR007438; KEGG: gfo:GFO_0722 hypothetical protein; PFAM: Protein of unknown function DUF488; SPTR: Protein containing DUF488; hypothetical protein 2902804 11055478 Murru_2629 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789086.1 2902445 R 886377 CDS YP_004789087.1 344203944 11055479 complement(2902842..2903546) 1 NC_015945.1 PFAM: short chain dehydrogenase; COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: rmr:Rmar_2639 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 2903546 11055479 Murru_2630 Muricauda ruestringensis DSM 13258 3-oxoacyl-ACP reductase YP_004789087.1 2902842 R 886377 CDS YP_004789088.1 344203945 11055480 complement(2903551..2904018) 1 NC_015945.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain; COGs: COG2128 conserved hypothetical protein; InterPro IPR004675:IPR003779; KEGG: ote:Oter_3729 alkylhydroperoxidase; PFAM: Carboxymuconolactone decarboxylase; SPTR: Alkylhydroperoxidase like protein, AhpD family; TIGRFAM: Alkylhydroperoxidase AhpD core; alkylhydroperoxidase 2904018 11055480 Murru_2631 Muricauda ruestringensis DSM 13258 alkylhydroperoxidase YP_004789088.1 2903551 R 886377 CDS YP_004789089.1 344203946 11055481 complement(2904030..2904344) 1 NC_015945.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain; COGs: COG0599 gamma-carboxymuconolactone decarboxylase subunit; InterPro IPR004675:IPR003779; KEGG: scl:sce7866 hypothetical protein; PFAM: Carboxymuconolactone decarboxylase; SPTR: Alkylhydroperoxidase; TIGRFAM: Alkylhydroperoxidase AhpD core; alkylhydroperoxidase 2904344 11055481 Murru_2632 Muricauda ruestringensis DSM 13258 alkylhydroperoxidase YP_004789089.1 2904030 R 886377 CDS YP_004789090.1 344203947 11055482 complement(2904369..2904785) 1 NC_015945.1 PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, OsmC subfamily; COGs: COG1764 redox protein regulator of disulfide bond formation; InterPro IPR019904:IPR003718; KEGG: ilo:IL2550 organic hydroperoxide reductase; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: Organic hydroperoxide reductase; TIGRFAM: Peroxiredoxin, osmotically inducible protein C, subgroup; OsmC subfamily peroxiredoxin 2904785 11055482 Murru_2633 Muricauda ruestringensis DSM 13258 OsmC subfamily peroxiredoxin YP_004789090.1 2904369 R 886377 CDS YP_004789091.1 344203948 11055483 complement(2904846..2907614) 1 NC_015945.1 PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1; COGs: COG1048 Aconitase A; InterPro IPR006249:IPR001030:IPR000573; KEGG: gfo:GFO_1390 aconitase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel; PRIAM: Aconitate hydratase; SPTR: Aconitase; TIGRFAM: Aconitase/iron regulatory protein 2; aconitate hydratase 1 2907614 11055483 Murru_2634 Muricauda ruestringensis DSM 13258 aconitate hydratase 1 YP_004789091.1 2904846 R 886377 CDS YP_004789092.1 344203949 11055484 complement(2907763..2908056) 1 NC_015945.1 PFAM: Cupin domain; InterPro IPR013096; KEGG: gfo:GFO_1392 RmlC-like cupin family protein; PFAM: Cupin 2, conserved barrel; SPTR: RmlC-like cupin family protein; cupin 2 barrel domain-containing protein 2908056 11055484 Murru_2635 Muricauda ruestringensis DSM 13258 cupin 2 barrel domain-containing protein YP_004789092.1 2907763 R 886377 CDS YP_004789093.1 344203950 11055485 complement(2908059..2908970) 1 NC_015945.1 PFAM: Tryptophan 2,3-dioxygenase; COGs: COG3483 Tryptophan 2 3-dioxygenase (vermilion); InterPro IPR004981; KEGG: fbc:FB2170_05105 hypothetical protein; PFAM: Tryptophan 2,3-dioxygenase; SPTR: Putative uncharacterized protein; tryptophan 23-dioxygenase 2908970 11055485 Murru_2636 Muricauda ruestringensis DSM 13258 tryptophan 23-dioxygenase YP_004789093.1 2908059 R 886377 CDS YP_004789094.1 344203951 11055486 complement(2908974..2909411) 1 NC_015945.1 KEGG: lby:Lbys_0337 hypothetical protein; SPTR: Putative membrane protein; hypothetical protein 2909411 11055486 Murru_2637 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789094.1 2908974 R 886377 CDS YP_004789095.1 344203952 11055487 complement(2909408..2909797) 1 NC_015945.1 PFAM: Bacterial-like globin; COGs: COG2346 Truncated hemoglobins; KEGG: gfo:GFO_1394 globin family protein; SPTR: Bacterial-like globin family protein; globin family protein 2909797 11055487 Murru_2638 Muricauda ruestringensis DSM 13258 globin family protein YP_004789095.1 2909408 R 886377 CDS YP_004789096.1 344203953 11055488 complement(2909797..2910219) 1 NC_015945.1 KEGG: gfo:GFO_1395 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2910219 11055488 Murru_2639 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789096.1 2909797 R 886377 CDS YP_004789097.1 344203954 11055489 complement(2910206..2910493) 1 NC_015945.1 KEGG: gfo:GFO_1396 secreted protein; SPTR: Secreted protein; hypothetical protein 2910493 11055489 Murru_2640 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789097.1 2910206 R 886377 CDS YP_004789098.1 344203955 11055490 complement(2910497..2911552) 1 NC_015945.1 PFAM: Cytochrome c; Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR003468:IPR003088; KEGG: gfo:GFO_1397 cbb3-type cytochrome c oxidase subunit II; PFAM: Cytochrome c oxidase, monohaem subunit/FixO; Cytochrome c, class I; SPTR: Cbb3-type cytochrome c oxidase subunit II; cytochrome C oxidase mono-heme subunit/FixO 2911552 11055490 Murru_2641 Muricauda ruestringensis DSM 13258 cytochrome C oxidase mono-heme subunit/FixO YP_004789098.1 2910497 R 886377 CDS YP_004789099.1 344203956 11055491 complement(2911521..2913347) 1 NC_015945.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883; KEGG: gfo:GFO_1398 cbb3-type cytochrome c oxidase subunit I; PFAM: Cytochrome c oxidase, subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Cbb3-type cytochrome c oxidase subunit I; cytochrome-c oxidase 2913347 11055491 Murru_2642 Muricauda ruestringensis DSM 13258 cytochrome-c oxidase YP_004789099.1 2911521 R 886377 CDS YP_004789100.1 344203957 11055492 complement(2913384..2913695) 1 NC_015945.1 hypothetical protein 2913695 11055492 Murru_2643 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789100.1 2913384 R 886377 CDS YP_004789101.1 344203958 11055493 complement(2913958..2914320) 1 NC_015945.1 KEGG: rbi:RB2501_04565 putative transmembrane protein; SPTR: Probable transmembrane protein; hypothetical protein 2914320 11055493 Murru_2644 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789101.1 2913958 R 886377 CDS YP_004789102.1 344203959 11055494 complement(2914421..2915101) 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: rbi:RB2501_04575 RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 2915101 11055494 Murru_2645 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004789102.1 2914421 R 886377 CDS YP_004789103.1 344203960 11055495 2915312..2915977 1 NC_015945.1 PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterPro IPR008333:IPR001433; KEGG: rbi:RB2501_04580 putative flavodoxin reductase; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase, FAD-binding domain; SPTR: Putative flavodoxin reductase; oxidoreductase FAD/NAD(P)-binding domain-containing protein 2915977 11055495 Murru_2646 Muricauda ruestringensis DSM 13258 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_004789103.1 2915312 D 886377 CDS YP_004789104.1 344203961 11055496 2915989..2916636 1 NC_015945.1 PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; COGs: COG0302 GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; InterPro IPR001474:IPR020602; KEGG: rbi:RB2501_04585 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: GTP cyclohydrolase I; SPTR: GTP cyclohydrolase 1 2; TIGRFAM: GTP cyclohydrolase I; GTP cyclohydrolase 1 2916636 11055496 Murru_2647 Muricauda ruestringensis DSM 13258 GTP cyclohydrolase 1 YP_004789104.1 2915989 D 886377 CDS YP_004789105.1 344203962 11055497 2916701..2917219 1 NC_015945.1 COGs: COG3652 outer membrane protein; KEGG: rbi:RB2501_04590 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2917219 11055497 Murru_2648 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789105.1 2916701 D 886377 CDS YP_004789106.1 344203963 11055498 2917224..2917574 1 NC_015945.1 PFAM: Copper binding proteins, plastocyanin/azurin family; COGs: COG3794 Plastocyanin; InterPro IPR000923; KEGG: rbi:RB2501_04595 hypothetical protein; PFAM: Blue (type 1) copper domain; SPTR: Putative uncharacterized protein; blue (type 1) copper domain-containing protein 2917574 11055498 Murru_2649 Muricauda ruestringensis DSM 13258 blue (type 1) copper domain-containing protein YP_004789106.1 2917224 D 886377 CDS YP_004789107.1 344203964 11055499 2917669..2919021 1 NC_015945.1 KEGG: rbi:RB2501_04600 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2919021 11055499 Murru_2650 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789107.1 2917669 D 886377 CDS YP_004789108.1 344203965 11055500 2919196..2919300 1 NC_015945.1 hypothetical protein 2919300 11055500 Murru_2651 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789108.1 2919196 D 886377 CDS YP_004789109.1 344203966 11055501 2919285..2920073 1 NC_015945.1 PFAM: CAAX amino terminal protease family; InterPro IPR003675; KEGG: rbi:RB2501_04605 hypothetical protein; PFAM: Abortive infection protein; SPTR: Putative uncharacterized protein; abortive infection protein 2920073 11055501 Murru_2652 Muricauda ruestringensis DSM 13258 abortive infection protein YP_004789109.1 2919285 D 886377 CDS YP_004789110.1 344203967 11055502 2920168..2923323 1 NC_015945.1 PFAM: ResB-like family; Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541; KEGG: rbi:RB2501_04610 cytochrome c assembly protein; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c assembly protein; cytochrome c assembly protein 2923323 11055502 Murru_2653 Muricauda ruestringensis DSM 13258 cytochrome c assembly protein YP_004789110.1 2920168 D 886377 CDS YP_004789111.1 344203968 11055503 complement(2923320..2924777) 1 NC_015945.1 PFAM: Pyridoxal-dependent decarboxylase conserved domain; COGs: COG0076 Glutamate decarboxylase and related PLP-dependent protein; InterPro IPR002129; KEGG: fbc:FB2170_14043 aromatic-L-amino-acid decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase; PRIAM: Aromatic-L-amino-acid decarboxylase; SPTR: Aromatic-L-amino-acid decarboxylase; aromatic-L-amino-acid decarboxylase 2924777 11055503 Murru_2654 Muricauda ruestringensis DSM 13258 aromatic-L-amino-acid decarboxylase YP_004789111.1 2923320 R 886377 CDS YP_004789112.1 344203969 11055504 complement(2924784..2925500) 1 NC_015945.1 PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterPro IPR008333:IPR001433; KEGG: rbi:RB2501_04615 putative flavodoxin reductase; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase, FAD-binding domain; SPTR: Putative flavodoxin reductase; oxidoreductase FAD/NAD(P)-binding domain-containing protein 2925500 11055504 Murru_2655 Muricauda ruestringensis DSM 13258 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_004789112.1 2924784 R 886377 CDS YP_004789113.1 344203970 11055505 complement(2925581..2925886) 1 NC_015945.1 hypothetical protein 2925886 11055505 Murru_2656 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789113.1 2925581 R 886377 CDS YP_004789114.1 344203971 11055506 complement(2925896..2926228) 1 NC_015945.1 PFAM: Bacterial-like globin; COGs: COG2346 Truncated hemoglobins; KEGG: lby:Lbys_0336 globin family protein; SPTR: Bacterial-like globin family protein; globin family protein 2926228 11055506 Murru_2657 Muricauda ruestringensis DSM 13258 globin family protein YP_004789114.1 2925896 R 886377 CDS YP_004789115.1 344203972 11055507 2926456..2926977 1 NC_015945.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase; COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: fma:FMG_1186 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 2926977 11055507 Murru_2658 Muricauda ruestringensis DSM 13258 5-formyltetrahydrofolate cyclo-ligase YP_004789115.1 2926456 D 886377 CDS YP_004789116.1 344203973 11055509 complement(2928061..2928384) 1 NC_015945.1 KEGG: fjo:Fjoh_1582 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2928384 11055509 Murru_2660 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789116.1 2928061 R 886377 CDS YP_004789117.1 344203974 11055510 complement(2928365..2928826) 1 NC_015945.1 KEGG: mtt:Ftrac_2728 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2928826 11055510 Murru_2661 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789117.1 2928365 R 886377 CDS YP_004789118.1 344203975 11055512 complement(2929629..2930063) 1 NC_015945.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: gfo:GFO_1399 Rrf2-like transcriptional regulator protein; PFAM: Transcription regulator Rrf2; SPTR: Rrf2-like transcriptional regulator protein; TIGRFAM: Transcription regulator Rrf2; BadM/Rrf2 family transcriptional regulator 2930063 11055512 Murru_2663 Muricauda ruestringensis DSM 13258 BadM/Rrf2 family transcriptional regulator YP_004789118.1 2929629 R 886377 CDS YP_004789119.1 344203976 11055513 2930117..2930287 1 NC_015945.1 hypothetical protein 2930287 11055513 Murru_2664 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789119.1 2930117 D 886377 CDS YP_004789120.1 344203977 11055514 complement(2930647..2931990) 1 NC_015945.1 PFAM: Voltage gated chloride channel; COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807; KEGG: gfo:GFO_0721 voltage gated chloride channel; PFAM: Chloride channel, voltage gated; SPTR: Voltage gated chloride channel; Cl- channel voltage-gated family protein 2931990 11055514 Murru_2665 Muricauda ruestringensis DSM 13258 Cl- channel voltage-gated family protein YP_004789120.1 2930647 R 886377 CDS YP_004789121.1 344203978 11055515 complement(2932182..2933633) 1 NC_015945.1 PFAM: Pyridoxal-dependent decarboxylase conserved domain; COGs: COG0076 Glutamate decarboxylase and related PLP-dependent protein; InterPro IPR002129; KEGG: sti:Sthe_2364 pyridoxal-dependent decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase; PRIAM: Sulfinoalanine decarboxylase; SPTR: Putative uncharacterized protein; Sulfinoalanine decarboxylase 2933633 11055515 Murru_2666 Muricauda ruestringensis DSM 13258 Sulfinoalanine decarboxylase YP_004789121.1 2932182 R 886377 CDS YP_004789122.1 344203979 11055516 complement(2934195..2934905) 1 NC_015945.1 PFAM: SCO1/SenC; COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: fbc:FB2170_14913 SCO1/SenC/PrrC family protein; PFAM: Copper chaperone SCO1/SenC; SPTR: Uncharacterized secreted protein of SCO1/SenC/PrrC family; electron transport protein SCO1/SenC 2934905 11055516 Murru_2667 Muricauda ruestringensis DSM 13258 electron transport protein SCO1/SenC YP_004789122.1 2934195 R 886377 CDS YP_004789123.1 344203980 11055517 complement(2934917..2935696) 1 NC_015945.1 PFAM: Formylglycine-generating sulfatase enzyme; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: fbc:FB2170_14918 hypothetical protein; PFAM: Sulphatase-modifying factor; SPTR: Putative uncharacterized protein; sulfatase-modifying factor protein 2935696 11055517 Murru_2668 Muricauda ruestringensis DSM 13258 sulfatase-modifying factor protein YP_004789123.1 2934917 R 886377 CDS YP_004789124.1 344203981 11055518 complement(2935718..2937157) 1 NC_015945.1 PFAM: Multicopper oxidase; Cytochrome c; TIGRFAM: nitrite reductase, copper-containing; COGs: COG2132 Putative multicopper oxidase; InterPro IPR001287:IPR011706:IPR001117:IPR003088; KEGG: fbc:FB2170_14923 putative nitrite reductase; PFAM: Cytochrome c, class I; Multicopper oxidase, type 2; Multicopper oxidase, type 1; PRIAM: Nitrite reductase (NO-forming); SPTR: Probable nitrite reductase; TIGRFAM: Nitrite reductase, copper containing; nitrite reductase 2937157 11055518 Murru_2669 Muricauda ruestringensis DSM 13258 nitrite reductase YP_004789124.1 2935718 R 886377 CDS YP_004789125.1 344203982 11055519 complement(2937267..2937572) 1 NC_015945.1 PFAM: Cyclic nucleotide-binding domain; InterPro IPR000595; KEGG: chu:CHU_2876 cyclic nucleotide binding regulatory protein; PFAM: Cyclic nucleotide-binding domain; SPTR: Putative transcriptional regulator, Crp/Fnr family; cyclic nucleotide-binding protein 2937572 11055519 Murru_2670 Muricauda ruestringensis DSM 13258 cyclic nucleotide-binding protein YP_004789125.1 2937267 R 886377 CDS YP_004789126.1 344203983 11055520 2938024..2938851 1 NC_015945.1 PFAM: Trehalose utilisation; COGs: COG3828 conserved hypothetical protein; KEGG: cce:Ccel_0213 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2938851 11055520 Murru_2671 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789126.1 2938024 D 886377 CDS YP_004789127.1 344203984 11055521 2938861..2940093 1 NC_015945.1 PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: mma:MM_3157 putative 6-aminohexanoate-dimer hydrolase; PFAM: Beta-lactamase-related; SPTR: Putative 6-aminohexanoate-dimer hydrolase; beta-lactamase 2940093 11055521 Murru_2672 Muricauda ruestringensis DSM 13258 beta-lactamase YP_004789127.1 2938861 D 886377 CDS YP_004789128.1 344203985 11055522 2940236..2941195 1 NC_015945.1 PFAM: Trehalose utilisation; COGs: COG3828 conserved hypothetical protein; KEGG: gym:GYMC10_3792 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2941195 11055522 Murru_2673 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789128.1 2940236 D 886377 CDS YP_004789129.1 344203986 11055523 2941452..2942594 1 NC_015945.1 PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; COGs: COG2706 3-carboxymuconate cyclase; InterPro IPR019405; KEGG: sus:Acid_6335 hypothetical protein; PFAM: Lactonase, 7-bladed beta propeller; SPTR: Putative uncharacterized protein; lactonase 2942594 11055523 Murru_2674 Muricauda ruestringensis DSM 13258 lactonase YP_004789129.1 2941452 D 886377 CDS YP_004789130.1 344203987 11055524 2942628..2943563 1 NC_015945.1 PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: mep:MPQ_0940 smp-30/gluconolaconase/lre domain protein; SPTR: SMP-30/Gluconolaconase/LRE-like region family; smp-30/gluconolaconase/lre domain-containing protein 2943563 11055524 Murru_2675 Muricauda ruestringensis DSM 13258 smp-30/gluconolaconase/lre domain-containing protein YP_004789130.1 2942628 D 886377 CDS YP_004789131.1 344203988 11055525 2943788..2944786 1 NC_015945.1 KEGG: sus:Acid_3986 PKD domain-containing protein; SPTR: PKD domain containing protein; PKD domain-containing protein 2944786 11055525 Murru_2676 Muricauda ruestringensis DSM 13258 PKD domain-containing protein YP_004789131.1 2943788 D 886377 CDS YP_004789132.1 344203989 11055526 complement(2945040..2945156) 1 NC_015945.1 hypothetical protein 2945156 11055526 Murru_2677 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789132.1 2945040 R 886377 CDS YP_004789133.1 344203990 11055527 complement(2945209..2945766) 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR014327:IPR007627:IPR013249; KEGG: zpr:ZPR_1753 RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 2945766 11055527 Murru_2678 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004789133.1 2945209 R 886377 CDS YP_004789134.1 344203991 11055528 2945909..2947063 1 NC_015945.1 PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: fjo:Fjoh_2007 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR; anti-FecI sigma factor FecR 2947063 11055528 Murru_2679 Muricauda ruestringensis DSM 13258 anti-FecI sigma factor FecR YP_004789134.1 2945909 D 886377 CDS YP_004789135.1 344203992 11055529 2947245..2950622 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR011662:IPR012910:IPR000531; KEGG: bvu:BVU_0389 hypothetical protein; PFAM: TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent receptor, beta-barrel; SPTR: Putative uncharacterized protein; TonB-dependent receptor plug 2950622 11055529 Murru_2680 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004789135.1 2947245 D 886377 CDS YP_004789136.1 344203993 11055530 2950633..2952207 1 NC_015945.1 PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_2208 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 2952207 11055530 Murru_2681 Muricauda ruestringensis DSM 13258 RagB/SusD domain-containing protein YP_004789136.1 2950633 D 886377 CDS YP_004789137.1 344203994 11055531 2952758..2954497 1 NC_015945.1 PFAM: Cytochrome c; Glucose / Sorbosone dehydrogenase; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR003088; KEGG: fbc:FB2170_15068 L-sorbosone dehydrogenase; PFAM: Cytochrome c, class I; SPTR: L-sorbosone dehydrogenase; cytochrome c class I 2954497 11055531 Murru_2682 Muricauda ruestringensis DSM 13258 cytochrome c class I YP_004789137.1 2952758 D 886377 CDS YP_004789138.1 344203995 11055532 2954595..2955371 1 NC_015945.1 PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: fbc:FB2170_08784 short-chain alcohol dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short-chain alcohol dehydrogenase; 3-oxoacyl-ACP reductase 2955371 11055532 Murru_2683 Muricauda ruestringensis DSM 13258 3-oxoacyl-ACP reductase YP_004789138.1 2954595 D 886377 CDS YP_004789139.1 344203996 11055533 2955422..2956276 1 NC_015945.1 PFAM: Fumarylacetoacetate (FAA) hydrolase family; COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: zpr:ZPR_4369 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase; PFAM: Fumarylacetoacetase, C-terminal-like; PRIAM: Ureidoglycolate lyase; SPTR: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase; ureidoglycolate lyase 2956276 11055533 Murru_2684 Muricauda ruestringensis DSM 13258 ureidoglycolate lyase YP_004789139.1 2955422 D 886377 CDS YP_004789140.1 344203997 11055534 2956287..2957435 1 NC_015945.1 PFAM: FMN-dependent dehydrogenase; COGs: COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase; InterPro IPR000262; KEGG: fbc:FB2170_17401 L-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase; PFAM: FMN-dependent dehydrogenase; PRIAM: L-lactate dehydrogenase (cytochrome); SPTR: L-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase; L-lactate dehydrogenase (cytochrome) 2957435 11055534 Murru_2685 Muricauda ruestringensis DSM 13258 L-lactate dehydrogenase (cytochrome) YP_004789140.1 2956287 D 886377 CDS YP_004789141.1 344203998 11055535 2957464..2957607 1 NC_015945.1 hypothetical protein 2957607 11055535 Murru_2686 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789141.1 2957464 D 886377 CDS YP_004789142.1 344203999 11055536 2957594..2960032 1 NC_015945.1 PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: phosphoenolpyruvate synthase; COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterPro IPR006319:IPR002192:IPR008279:IPR000121; KEGG: pmx:PERMA_0568 phosphoenolpyruvate synthase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme; PRIAM: Pyruvate, water dikinase; SPTR: Phosphoenolpyruvate synthase; TIGRFAM: Phosphoenolpyruvate synthase; phosphoenolpyruvate synthase 2960032 11055536 Murru_2687 Muricauda ruestringensis DSM 13258 phosphoenolpyruvate synthase YP_004789142.1 2957594 D 886377 CDS YP_004789143.1 344204000 11055537 2960220..2961449 1 NC_015945.1 PFAM: Major Facilitator Superfamily; InterPro IPR011701; KEGG: fbc:FB2170_14638 hypothetical protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; major facilitator superfamily protein 2961449 11055537 Murru_2688 Muricauda ruestringensis DSM 13258 major facilitator superfamily protein YP_004789143.1 2960220 D 886377 CDS YP_004789144.1 344204001 11055539 2962310..2962525 1 NC_015945.1 PFAM: Helix-turn-helix; TIGRFAM: transcriptional regulator, y4mF family; InterPro IPR001387; KEGG: lpn:lpg2377 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; helix-turn-helix domain-containing protein 2962525 11055539 Murru_2690 Muricauda ruestringensis DSM 13258 helix-turn-helix domain-containing protein YP_004789144.1 2962310 D 886377 CDS YP_004789145.1 344204002 11055540 2962522..2962839 1 NC_015945.1 TIGRFAM: HipA N-terminal domain; InterPro IPR017508; KEGG: lpa:lpa_03436 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: HipA, N-terminal; HipA N-terminal domain-containing protein 2962839 11055540 Murru_2691 Muricauda ruestringensis DSM 13258 HipA N-terminal domain-containing protein YP_004789145.1 2962522 D 886377 CDS YP_004789146.1 344204003 11055541 2962832..2963755 1 NC_015945.1 PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain; COGs: COG3550 conserved hypothetical protein; InterPro IPR012894:IPR012893; KEGG: lpn:lpg2370 hypothetical protein; PFAM: HipA-like, N-terminal; HipA-like, C-terminal; SPTR: Putative uncharacterized protein; HipA domain-containing protein 2963755 11055541 Murru_2692 Muricauda ruestringensis DSM 13258 HipA domain-containing protein YP_004789146.1 2962832 D 886377 CDS YP_004789147.1 344204004 11055542 complement(2964171..2967332) 1 NC_015945.1 PFAM: Peptidase family M1; KEGG: rbi:RB2501_10902 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2967332 11055542 Murru_2693 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789147.1 2964171 R 886377 CDS YP_004789148.1 344204005 11055543 complement(2967329..2968204) 1 NC_015945.1 PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: rbi:RB2501_10907 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC superfamily ATP binding cassette transporter ABC protein; phosphonate-transporting ATPase 2968204 11055543 Murru_2694 Muricauda ruestringensis DSM 13258 phosphonate-transporting ATPase YP_004789148.1 2967329 R 886377 CDS YP_004789149.1 344204006 11055544 complement(2968226..2968429) 1 NC_015945.1 PFAM: Helix-turn-helix; COGs: COG3655 transcriptional regulator protein; InterPro IPR001387; KEGG: fjo:Fjoh_1981 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator; manually curated; XRE family transcriptional regulator 2968429 11055544 Murru_2695 Muricauda ruestringensis DSM 13258 XRE family transcriptional regulator YP_004789149.1 2968226 R 886377 CDS YP_004789150.1 344204007 11055545 complement(2968433..2968942) 1 NC_015945.1 KEGG: fjo:Fjoh_1982 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2968942 11055545 Murru_2696 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789150.1 2968433 R 886377 CDS YP_004789151.1 344204008 11055547 complement(2969837..2970466) 1 NC_015945.1 PFAM: Nitroreductase family; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: rbi:RB2501_10892 hypothetical protein; PFAM: Nitroreductase-like; SPTR: Putative uncharacterized protein; nitroreductase 2970466 11055547 Murru_2698 Muricauda ruestringensis DSM 13258 nitroreductase YP_004789151.1 2969837 R 886377 CDS YP_004789152.1 344204009 11055548 complement(2970506..2970955) 1 NC_015945.1 PFAM: Protein of unknown function, DUF606; COGs: COG3238 conserved hypothetical protein; InterPro IPR006750; KEGG: fbc:FB2170_00270 hypothetical protein; PFAM: Protein of unknown function DUF606; SPTR: Putative uncharacterized protein; hypothetical protein 2970955 11055548 Murru_2699 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789152.1 2970506 R 886377 CDS YP_004789153.1 344204010 11055549 2971131..2972591 1 NC_015945.1 PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: rbi:RB2501_10862 beta-lactamase; PFAM: Beta-lactamase-related; PRIAM: D-stereospecific aminopeptidase; SPTR: Beta-lactamase; D-stereospecific aminopeptidase 2972591 11055549 Murru_2700 Muricauda ruestringensis DSM 13258 D-stereospecific aminopeptidase YP_004789153.1 2971131 D 886377 CDS YP_004789154.1 344204011 11055550 2972596..2973933 1 NC_015945.1 PFAM: Amidohydrolase family; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: rbi:RB2501_10857 amidohydrolase family enzyme; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase family enzyme; amidohydrolase 2973933 11055550 Murru_2701 Muricauda ruestringensis DSM 13258 amidohydrolase YP_004789154.1 2972596 D 886377 CDS YP_004789155.1 344204012 11055551 2973937..2974281 1 NC_015945.1 COGs: COG3232 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: fbc:FB2170_00320 putative 5-carboxymethyl-2-hydroxymuconate delta-isomerase; SPTR: Putative 5-carboxymethyl-2-hydroxymuconate delta-isomerase; putative 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2974281 11055551 Murru_2702 Muricauda ruestringensis DSM 13258 putative 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_004789155.1 2973937 D 886377 CDS YP_004789156.1 344204013 11055552 2974291..2975433 1 NC_015945.1 PFAM: Putative esterase; COGs: COG2819 hydrolase of the alpha/beta superfamily; InterPro IPR000801; KEGG: fbc:FB2170_09501 putative esterase; PFAM: Putative esterase; SPTR: Putative esterase; esterase 2975433 11055552 Murru_2703 Muricauda ruestringensis DSM 13258 esterase YP_004789156.1 2974291 D 886377 CDS YP_004789157.1 344204014 11055553 2975438..2975899 1 NC_015945.1 KEGG: rbi:RB2501_06905 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2975899 11055553 Murru_2704 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789157.1 2975438 D 886377 CDS YP_004789158.1 344204015 11055554 2976120..2977217 1 NC_015945.1 PFAM: DJ-1/PfpI family; COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR002818; KEGG: cps:CPS_1285 DJ-1/PfpI family protein; PFAM: ThiJ/PfpI; SPTR: DJ-1/PfpI family protein; ThiJ/PfpI domain-containing protein 2977217 11055554 Murru_2705 Muricauda ruestringensis DSM 13258 ThiJ/PfpI domain-containing protein YP_004789158.1 2976120 D 886377 CDS YP_004789159.1 344204016 11055555 2977225..2977320 1 NC_015945.1 hypothetical protein 2977320 11055555 Murru_2706 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789159.1 2977225 D 886377 CDS YP_004789160.1 344204017 11055556 2977305..2978201 1 NC_015945.1 KEGG: ttu:TERTU_3395 metallo-beta-lactamase domain protein; SPTR: Metallo-beta-lactamase domain protein; hypothetical protein 2978201 11055556 Murru_2707 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789160.1 2977305 D 886377 CDS YP_004789161.1 344204018 11055557 complement(2978241..2978540) 1 NC_015945.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: pla:Plav_1379 antibiotic biosynthesis monooxygenase; SPTR: Putative uncharacterized protein; antibiotic biosynthesis monooxygenase 2978540 11055557 Murru_2708 Muricauda ruestringensis DSM 13258 antibiotic biosynthesis monooxygenase YP_004789161.1 2978241 R 886377 CDS YP_004789162.1 344204019 11055558 complement(2978565..2978966) 1 NC_015945.1 PFAM: DoxX; InterPro IPR011637; KEGG: lby:Lbys_2858 DoxX family protein; PFAM: Uncharacterised protein family YphA; SPTR: DoxX protein; DoxX family protein 2978966 11055558 Murru_2709 Muricauda ruestringensis DSM 13258 DoxX family protein YP_004789162.1 2978565 R 886377 CDS YP_004789163.1 344204020 11055559 complement(2978984..2979607) 1 NC_015945.1 KEGG: lby:Lbys_2857 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2979607 11055559 Murru_2710 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789163.1 2978984 R 886377 CDS YP_004789164.1 344204021 11055560 complement(2979774..2980502) 1 NC_015945.1 PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: rbi:RB2501_10887 hypothetical protein; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Acetyltransferase, gnat family; N-acetyltransferase GCN5 2980502 11055560 Murru_2711 Muricauda ruestringensis DSM 13258 N-acetyltransferase GCN5 YP_004789164.1 2979774 R 886377 CDS YP_004789165.1 344204022 11055561 complement(2980587..2981168) 1 NC_015945.1 PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: rbi:RB2501_10872 hypothetical protein; PFAM: Cyclic nucleotide-binding domain; SPTR: Putative uncharacterized protein; putative Crp/Fnr family transcriptional regulator 2981168 11055561 Murru_2712 Muricauda ruestringensis DSM 13258 putative Crp/Fnr family transcriptional regulator YP_004789165.1 2980587 R 886377 CDS YP_004789166.1 344204023 11055562 2981338..2982018 1 NC_015945.1 KEGG: mac:MA2339 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2982018 11055562 Murru_2713 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789166.1 2981338 D 886377 CDS YP_004789167.1 344204024 11055563 complement(2982034..2982609) 1 NC_015945.1 PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: dfe:Dfer_0777 putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; SPTR: Putative transcriptional regulator, Crp/Fnr family; putative Crp/Fnr family transcriptional regulator 2982609 11055563 Murru_2714 Muricauda ruestringensis DSM 13258 putative Crp/Fnr family transcriptional regulator YP_004789167.1 2982034 R 886377 CDS YP_004789168.1 344204025 11055564 complement(2982730..2983110) 1 NC_015945.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: rbi:RB2501_10897 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Putative uncharacterized protein; bleomycin resistance protein 2983110 11055564 Murru_2715 Muricauda ruestringensis DSM 13258 bleomycin resistance protein YP_004789168.1 2982730 R 886377 CDS YP_004789169.1 344204026 11055566 2984583..2985023 1 NC_015945.1 hypothetical protein 2985023 11055566 Murru_2717 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789169.1 2984583 D 886377 CDS YP_004789170.1 344204027 11055567 2985082..2986362 1 NC_015945.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: zpr:ZPR_4375 RND family efflux transporter MFP subunit; PFAM: Secretion protein HlyD; SPTR: RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 2986362 11055567 Murru_2718 Muricauda ruestringensis DSM 13258 RND family efflux transporter MFP subunit YP_004789170.1 2985082 D 886377 CDS YP_004789171.1 344204028 11055568 2986469..2989639 1 NC_015945.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036; KEGG: zpr:ZPR_4374 hydrophobe/amphiphile efflux-1 (HAE1) family protein; PFAM: Acriflavin resistance protein; SPTR: Hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 2989639 11055568 Murru_2719 Muricauda ruestringensis DSM 13258 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_004789171.1 2986469 D 886377 CDS YP_004789172.1 344204029 11055569 2989657..2991126 1 NC_015945.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: zpr:ZPR_4373 outer membrane protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein 2991126 11055569 Murru_2720 Muricauda ruestringensis DSM 13258 NodT family RND efflux system outer membrane lipoprotein YP_004789172.1 2989657 D 886377 CDS YP_004789173.1 344204030 11055570 2991193..2992080 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: zpr:ZPR_4372 bacterial regulatory helix-turn-helix protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Bacterial regulatory helix-turn-helix protein; AraC family transcriptional regulator 2992080 11055570 Murru_2721 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004789173.1 2991193 D 886377 CDS YP_004789174.1 344204031 11055571 2992190..2992858 1 NC_015945.1 PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: zpr:ZPR_4371 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2992858 11055571 Murru_2722 Muricauda ruestringensis DSM 13258 short-chain dehydrogenase/reductase SDR YP_004789174.1 2992190 D 886377 CDS YP_004789175.1 344204032 11055572 complement(2992789..2992962) 1 NC_015945.1 hypothetical protein 2992962 11055572 Murru_2723 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789175.1 2992789 R 886377 CDS YP_004789176.1 344204033 11055574 complement(2993377..2994957) 1 NC_015945.1 InterPro IPR006680; KEGG: mtt:Ftrac_2237 amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase family enzyme; amidohydrolase 2994957 11055574 Murru_2725 Muricauda ruestringensis DSM 13258 amidohydrolase YP_004789176.1 2993377 R 886377 CDS YP_004789177.1 344204034 11055575 complement(2995198..2995737) 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: cpi:Cpin_3286 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma-70 factor, ECF subfamily protein; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 2995737 11055575 Murru_2726 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004789177.1 2995198 R 886377 CDS YP_004789178.1 344204035 11055576 2995907..2997067 1 NC_015945.1 PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: fjo:Fjoh_3336 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR; anti-FecI sigma factor FecR 2997067 11055576 Murru_2727 Muricauda ruestringensis DSM 13258 anti-FecI sigma factor FecR YP_004789178.1 2995907 D 886377 CDS YP_004789179.1 344204036 11055577 2997230..3000790 1 NC_015945.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: gfo:GFO_2846 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent outer membrane receptor; TonB-dependent receptor plug 3000790 11055577 Murru_2728 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004789179.1 2997230 D 886377 CDS YP_004789180.1 344204037 11055578 3000810..3002228 1 NC_015945.1 KEGG: fjo:Fjoh_0404 hypothetical protein; SPTR: RagB/SusD domain protein; hypothetical protein 3002228 11055578 Murru_2729 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789180.1 3000810 D 886377 CDS YP_004789181.1 344204038 11055579 3002469..3003968 1 NC_015945.1 PFAM: Serine carboxypeptidase; COGs: COG2939 Carboxypeptidase C (cathepsin A); InterPro IPR001563; KEGG: mtt:Ftrac_0656 peptidase S10 serine carboxypeptidase; PFAM: Peptidase S10, serine carboxypeptidase; SPTR: Peptidase S10 serine carboxypeptidase; peptidase S10 serine carboxypeptidase 3003968 11055579 Murru_2730 Muricauda ruestringensis DSM 13258 peptidase S10 serine carboxypeptidase YP_004789181.1 3002469 D 886377 CDS YP_004789182.1 344204039 11055580 3004015..3005622 1 NC_015945.1 PFAM: Amidohydrolase family; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: mtt:Ftrac_2237 amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase family enzyme; amidohydrolase 3005622 11055580 Murru_2731 Muricauda ruestringensis DSM 13258 amidohydrolase YP_004789182.1 3004015 D 886377 CDS YP_004789183.1 344204040 11055581 3005869..3007062 1 NC_015945.1 PFAM: Proline dehydrogenase; InterPro IPR002872; KEGG: fbc:FB2170_10826 CpmD protein involved in carbapenem biosynthesis; PFAM: Proline dehydrogenase; PRIAM: Proline dehydrogenase; SPTR: Proline dehydrogenase; proline dehydrogenase 3007062 11055581 Murru_2732 Muricauda ruestringensis DSM 13258 proline dehydrogenase YP_004789183.1 3005869 D 886377 CDS YP_004789184.1 344204041 11055582 complement(3007194..3008822) 1 NC_015945.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 1; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR005931:IPR015590; KEGG: fbc:FB2170_16741 delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde dehydrogenase domain; PRIAM: 1-pyrroline-5-carboxylate dehydrogenase; SPTR: Delta-1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 1; delta-1-pyrroline-5-carboxylate dehydrogenase 3008822 11055582 Murru_2733 Muricauda ruestringensis DSM 13258 delta-1-pyrroline-5-carboxylate dehydrogenase YP_004789184.1 3007194 R 886377 CDS YP_004789185.1 344204042 11055584 complement(3009336..3009713) 1 NC_015945.1 KEGG: rbi:RB2501_01196 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3009713 11055584 Murru_2735 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789185.1 3009336 R 886377 CDS YP_004789186.1 344204043 11055585 complement(3009703..3011568) 1 NC_015945.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: PAS domain S-box; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR000014:IPR003594:IPR011712; KEGG: fjo:Fjoh_4627 multi-sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; SPTR: Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS; putative signal transduction histidine kinase 3011568 11055585 Murru_2736 Muricauda ruestringensis DSM 13258 putative signal transduction histidine kinase YP_004789186.1 3009703 R 886377 CDS YP_004789187.1 344204044 11055586 complement(3011578..3012168) 1 NC_015945.1 KEGG: fjo:Fjoh_4626 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3012168 11055586 Murru_2737 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789187.1 3011578 R 886377 CDS YP_004789188.1 344204045 11055587 complement(3012189..3012566) 1 NC_015945.1 PFAM: Rieske [2Fe-2S] domain; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR012748:IPR017941; KEGG: fjo:Fjoh_4625 nitrite reductase (NAD(P)H), small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Nitrite reductase [NAD(P)H], small subunit; TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirD; nitrite reductase (NAD(P)H) small subunit 3012566 11055587 Murru_2738 Muricauda ruestringensis DSM 13258 nitrite reductase (NAD(P)H) small subunit YP_004789188.1 3012189 R 886377 CDS YP_004789189.1 344204046 11055588 complement(3012577..3015096) 1 NC_015945.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S] binding domain; Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; COGs: COG1251 NAD(P)H-nitrite reductase; InterProIPR012744:IPR013027:IPR007419:IPR005117:IPR 006067; KEGG: fjo:Fjoh_4624 nitrite reductase (NAD(P)H), large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; Nitrite/sulphite reductase 4Fe-4S domain; PRIAM: Nitrite reductase (NAD(P)H); SPTR: Nitrite reductase [NAD(P)H], large subunit; TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirB; nitrite reductase (NAD(P)H) large subunit 3015096 11055588 Murru_2739 Muricauda ruestringensis DSM 13258 nitrite reductase (NAD(P)H) large subunit YP_004789189.1 3012577 R 886377 CDS YP_004789190.1 344204047 11055589 3015218..3015994 1 NC_015945.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR006366:IPR000878; KEGG: sli:Slin_5405 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; PRIAM: Uroporphyrinogen-III C-methyltransferase; SPTR: Uroporphyrin-III C-methyltransferase; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; uroporphyrin-III C-methyltransferase 3015994 11055589 Murru_2740 Muricauda ruestringensis DSM 13258 uroporphyrin-III C-methyltransferase YP_004789190.1 3015218 D 886377 CDS YP_004789191.1 344204048 11055590 3016203..3017603 1 NC_015945.1 PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator); COGs: COG2223 Nitrate/nitrite transporter; InterPro IPR011701; KEGG: lbf:LBF_2686 nitrate/nitrite transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily transporter; major facilitator superfamily protein 3017603 11055590 Murru_2741 Muricauda ruestringensis DSM 13258 major facilitator superfamily protein YP_004789191.1 3016203 D 886377 CDS YP_004789192.1 344204049 11055591 3017655..3018947 1 NC_015945.1 KEGG: fbc:FB2170_14903 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3018947 11055591 Murru_2742 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789192.1 3017655 D 886377 CDS YP_004789193.1 344204050 11055592 3019046..3019729 1 NC_015945.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: fjo:Fjoh_4628 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SPTR: Two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 3019729 11055592 Murru_2743 Muricauda ruestringensis DSM 13258 two component LuxR family transcriptional regulator YP_004789193.1 3019046 D 886377 CDS YP_004789194.1 344204051 11055593 3019863..3023396 1 NC_015945.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; BFD-like [2Fe-2S] binding domain; Molybdopterin oxidoreductase Fe4S4 domain; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR006963:IPR006656:IPR006657:IPR013027:IPR 007419; KEGG: fjo:Fjoh_4633 molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase, Fe4S4 domain; Molydopterin dinucleotide-binding domain; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding domain; PRIAM: Nitrate reductase., Nitrite reductase (NAD(P)H); SMART: Molybdopterin oxidoreductase, Fe4S4 domain; SPTR: Nitrate reductase; Nitrate reductase., Nitrite reductase (NAD(P)H) 3023396 11055593 Murru_2744 Muricauda ruestringensis DSM 13258 Nitrate reductase., Nitrite reductase (NAD(P)H) YP_004789194.1 3019863 D 886377 CDS YP_004789195.1 344204052 11055594 3023401..3024840 1 NC_015945.1 PFAM: Rubredoxin; COGs: COG1773 Rubredoxin; InterPro IPR004039; KEGG: fjo:Fjoh_4634 rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubredoxin; Rubredoxin-type Fe(cys)4 protein 3024840 11055594 Murru_2745 Muricauda ruestringensis DSM 13258 Rubredoxin-type Fe(cys)4 protein YP_004789195.1 3023401 D 886377 CDS YP_004789196.1 344204053 11055597 3026290..3027141 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: cyn:Cyan7425_0099 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family; AraC family transcriptional regulator 3027141 11055597 Murru_2748 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004789196.1 3026290 D 886377 CDS YP_004789197.1 344204054 11055598 3027288..3027788 1 NC_015945.1 hypothetical protein 3027788 11055598 Murru_2749 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789197.1 3027288 D 886377 CDS YP_004789198.1 344204055 11055599 3027819..3028397 1 NC_015945.1 KEGG: rbi:RB2501_09300 outer membrane protein-like peptidoglycan-associated (LipO)protein; SPTR: Outer membrane protein-like peptidoglycan-associated (Lipo)protein; hypothetical protein 3028397 11055599 Murru_2750 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789198.1 3027819 D 886377 CDS YP_004789199.1 344204056 11055600 3028415..3029113 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 3029113 11055600 Murru_2751 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789199.1 3028415 D 886377 CDS YP_004789200.1 344204057 11055601 3029127..3029762 1 NC_015945.1 KEGG: rbi:RB2501_04445 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3029762 11055601 Murru_2752 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789200.1 3029127 D 886377 CDS YP_004789201.1 344204058 11055602 3029768..3031162 1 NC_015945.1 KEGG: rbi:RB2501_04450 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3031162 11055602 Murru_2753 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789201.1 3029768 D 886377 CDS YP_004789202.1 344204059 11055603 3031164..3031571 1 NC_015945.1 KEGG: rbi:RB2501_04455 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3031571 11055603 Murru_2754 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789202.1 3031164 D 886377 CDS YP_004789203.1 344204060 11055604 3031860..3032390 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR014284:IPR014327:IPR000792:IPR007627:IPR 013249; KEGG: gfo:GFO_1260 RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SMART: Transcription regulator LuxR, C-terminal; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 3032390 11055604 Murru_2755 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004789203.1 3031860 D 886377 CDS YP_004789204.1 344204061 11055605 complement(3032416..3033084) 1 NC_015945.1 PFAM: NUDIX domain; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086; KEGG: syp:SYNPCC7002_A2383 NUDIX hydrolase family protein; PFAM: NUDIX hydrolase domain; SPTR: NUDIX hydrolase; NUDIX hydrolase 3033084 11055605 Murru_2756 Muricauda ruestringensis DSM 13258 NUDIX hydrolase YP_004789204.1 3032416 R 886377 CDS YP_004789205.1 344204062 11055606 3033214..3034068 1 NC_015945.1 PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: has:Halsa_2366 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 3034068 11055606 Murru_2757 Muricauda ruestringensis DSM 13258 3-oxoacyl-ACP reductase YP_004789205.1 3033214 D 886377 CDS YP_004789206.1 344204063 11055607 3034105..3035289 1 NC_015945.1 PFAM: D-mannonate dehydratase (UxuA); TIGRFAM: mannonate dehydratase; COGs: COG1312 D-mannonate dehydratase; HAMAP: Mannonate dehydratase; InterPro IPR004628; KEGG: dfe:Dfer_4123 mannonate dehydratase; PFAM: Mannonate dehydratase; PRIAM: Mannonate dehydratase; SPTR: D-mannonate dehydratase; TIGRFAM: Mannonate dehydratase; mannonate dehydratase 3035289 11055607 Murru_2758 Muricauda ruestringensis DSM 13258 mannonate dehydratase YP_004789206.1 3034105 D 886377 CDS YP_004789207.1 344204064 11055608 3035289..3036716 1 NC_015945.1 PFAM: Glucuronate isomerase; COGs: COG1904 Glucuronate isomerase; HAMAP: Uronate isomerase; InterPro IPR003766; KEGG: rbi:RB2501_03985 uronate isomerase; PFAM: Uronate isomerase; PRIAM: Glucuronate isomerase; SPTR: Uronate isomerase; uronate isomerase 3036716 11055608 Murru_2759 Muricauda ruestringensis DSM 13258 uronate isomerase YP_004789207.1 3035289 D 886377 CDS YP_004789208.1 344204065 11055609 3036713..3037759 1 NC_015945.1 PFAM: pfkB family carbohydrate kinase; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: rbi:RB2501_13619 putative kinase; PFAM: Carbohydrate/purine kinase; SPTR: Putative kinase; PfkB domain-containing protein 3037759 11055609 Murru_2760 Muricauda ruestringensis DSM 13258 PfkB domain-containing protein YP_004789208.1 3036713 D 886377 CDS YP_004789209.1 344204066 11055610 3037824..3038498 1 NC_015945.1 PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase; COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; InterPro IPR000887; KEGG: fbc:FB2170_15053 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase; PFAM: KDPG/KHG aldolase; SPTR:Keto-hydroxyglutarate-aldolase/keto-deoxy-phos phogluconatealdolase; KDPG and KHG aldolase 3038498 11055610 Murru_2761 Muricauda ruestringensis DSM 13258 KDPG and KHG aldolase YP_004789209.1 3037824 D 886377 CDS YP_004789210.1 344204067 11055611 3038498..3039478 1 NC_015945.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR004682:IPR018389; KEGG: rbi:RB2501_03980 TRAP-type C4-dicarboxylate transport system, periplasmic component; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: TRAP-type C4-dicarboxylate transport system, periplasmic component; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit DctP 3039478 11055611 Murru_2762 Muricauda ruestringensis DSM 13258 TRAP dicarboxylate transporter subunit DctP YP_004789210.1 3038498 D 886377 CDS YP_004789211.1 344204068 11055612 3039478..3039936 1 NC_015945.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: rbi:RB2501_03975 putative TRAP-type C4-dicarboxylate transport system, small permease component; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: Hypothetical TRAP-type C4-dicarboxylate transport system, small permease component; tripartite AtP-independent periplasmic transporter subunit DctQ 3039936 11055612 Murru_2763 Muricauda ruestringensis DSM 13258 tripartite AtP-independent periplasmic transporter subunit DctQ YP_004789211.1 3039478 D 886377 CDS YP_004789212.1 344204069 11055613 3039942..3041237 1 NC_015945.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681:IPR010656; KEGG: rbi:RB2501_03970 hypothetical protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: Putative uncharacterized protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 3041237 11055613 Murru_2764 Muricauda ruestringensis DSM 13258 TRAP dicarboxylate transporter subunit DctM YP_004789212.1 3039942 D 886377 CDS YP_004789213.1 344204070 11055614 3041278..3042642 1 NC_015945.1 PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: fbc:FB2170_00670 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; hypothetical protein 3042642 11055614 Murru_2765 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789213.1 3041278 D 886377 CDS YP_004789214.1 344204071 11055615 3042646..3043974 1 NC_015945.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: fbc:FB2170_00675 putative dehydrogenase-like protein; PFAM: Oxidoreductase, N-terminal; SPTR: Putative dehydrogenase-related protein; oxidoreductase domain-containing protein 3043974 11055615 Murru_2766 Muricauda ruestringensis DSM 13258 oxidoreductase domain-containing protein YP_004789214.1 3042646 D 886377 CDS YP_004789215.1 344204072 11055616 3043980..3045155 1 NC_015945.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: fbc:FB2170_00680 putative hydrogenase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Putative hydrogenase; oxidoreductase domain-containing protein 3045155 11055616 Murru_2767 Muricauda ruestringensis DSM 13258 oxidoreductase domain-containing protein YP_004789215.1 3043980 D 886377 CDS YP_004789216.1 344204073 11055617 complement(3045603..3046208) 1 NC_015945.1 PFAM: MarR family; InterPro IPR000835; KEGG: fbc:FB2170_11026 transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator; regulatory protein MarR 3046208 11055617 Murru_2768 Muricauda ruestringensis DSM 13258 regulatory protein MarR YP_004789216.1 3045603 R 886377 CDS YP_004789217.1 344204074 11055618 complement(3046205..3046561) 1 NC_015945.1 PFAM: AIG2-like family; InterPro IPR009288; KEGG: ppg:PputGB1_5297 AIG2 family protein; PFAM: AIG2-like; SPTR: Putative uncharacterized protein; AIG2 family protein 3046561 11055618 Murru_2769 Muricauda ruestringensis DSM 13258 AIG2 family protein YP_004789217.1 3046205 R 886377 CDS YP_004789218.1 344204075 11055619 complement(3046558..3046821) 1 NC_015945.1 PFAM: Domain of unknown function (DUF2024); InterPro IPR018592; KEGG: fjo:Fjoh_4140 hypothetical protein; PFAM: Protein of unknown function DUF2024; SPTR: Putative uncharacterized protein; hypothetical protein 3046821 11055619 Murru_2770 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789218.1 3046558 R 886377 CDS YP_004789219.1 344204076 11055620 complement(3046892..3047620) 1 NC_015945.1 KEGG: cpi:Cpin_5104 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3047620 11055620 Murru_2771 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789219.1 3046892 R 886377 CDS YP_004789220.1 344204077 11055621 complement(3047698..3047931) 1 NC_015945.1 KEGG: fbc:FB2170_11036 thioredoxin; SPTR: Thioredoxin; thioredoxin 3047931 11055621 Murru_2772 Muricauda ruestringensis DSM 13258 thioredoxin YP_004789220.1 3047698 R 886377 CDS YP_004789221.1 344204078 11055622 complement(3048164..3049840) 1 NC_015945.1 PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR001902:IPR011547:IPR002645; KEGG: cch:Cag_1553 sulphate anion transporter; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Sulphate anion transporter; TIGRFAM: Sulphate anion transporter; sulfate transporter 3049840 11055622 Murru_2773 Muricauda ruestringensis DSM 13258 sulfate transporter YP_004789221.1 3048164 R 886377 CDS YP_004789222.1 344204079 11055624 complement(3050965..3051732) 1 NC_015945.1 PFAM: NUDIX domain; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086; KEGG: sli:Slin_0652 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: Putative uncharacterized protein; NUDIX hydrolase 3051732 11055624 Murru_2775 Muricauda ruestringensis DSM 13258 NUDIX hydrolase YP_004789222.1 3050965 R 886377 CDS YP_004789223.1 344204080 11055625 3051821..3053449 1 NC_015945.1 PFAM: Carboxylesterase; COGs: COG2272 Carboxylesterase type B; InterPro IPR002018; KEGG: rbi:RB2501_13134 putative esterase; PFAM: Carboxylesterase, type B; SPTR: Putative esterase; carboxylesterase type B 3053449 11055625 Murru_2776 Muricauda ruestringensis DSM 13258 carboxylesterase type B YP_004789223.1 3051821 D 886377 CDS YP_004789224.1 344204081 11055626 complement(3053593..3053820) 1 NC_015945.1 COGs: COG3655 transcriptional regulator protein; InterPro IPR001387; KEGG: cpi:Cpin_5711 transcriptional regulator, XRE family; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; XRE family transcriptional regulator 3053820 11055626 Murru_2777 Muricauda ruestringensis DSM 13258 XRE family transcriptional regulator YP_004789224.1 3053593 R 886377 CDS YP_004789225.1 344204082 11055627 complement(3053824..3054312) 1 NC_015945.1 PFAM: Protein of unknown function (DUF3036); KEGG: gmc:GY4MC1_3559 protein of unknown function DUF3036; SPTR: Putative uncharacterized protein; hypothetical protein 3054312 11055627 Murru_2778 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789225.1 3053824 R 886377 CDS YP_004789226.1 344204083 11055628 3054615..3054800 1 NC_015945.1 hypothetical protein 3054800 11055628 Murru_2779 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789226.1 3054615 D 886377 CDS YP_004789227.1 344204084 11055630 3055412..3055504 1 NC_015945.1 hypothetical protein 3055504 11055630 Murru_2781 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789227.1 3055412 D 886377 CDS YP_004789228.1 344204085 11055631 complement(3055501..3056097) 1 NC_015945.1 PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: ppn:Palpr_0445 transcriptional regulator, crp/fnr family; PFAM: Cyclic nucleotide-binding domain; SPTR: Putative transcriptional regulator, Crp/Fnr family; putative Crp/Fnr family transcriptional regulator 3056097 11055631 Murru_2782 Muricauda ruestringensis DSM 13258 putative Crp/Fnr family transcriptional regulator YP_004789228.1 3055501 R 886377 CDS YP_004789229.1 344204086 11055632 3056807..3062569 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR000014:IPR001610:IPR003018:IPR003661:IPR 003594:IPR013655:IPR013767:IPR013656; KEGG: mtt:Ftrac_0408 pas/pac sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; PAS fold-3; PAS fold; GAF; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAC motif; PAS; GAF; SPTR: Sensory transduction histidine kinase; TIGRFAM: PAS; multi-sensor signal transduction histidine kinase 3062569 11055632 Murru_2783 Muricauda ruestringensis DSM 13258 multi-sensor signal transduction histidine kinase YP_004789229.1 3056807 D 886377 CDS YP_004789230.1 344204087 11055633 3062566..3062991 1 NC_015945.1 PFAM: Response regulator receiver domain; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR001789; KEGG: mtt:Ftrac_0406 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Response regulator; response regulator receiver protein 3062991 11055633 Murru_2784 Muricauda ruestringensis DSM 13258 response regulator receiver protein YP_004789230.1 3062566 D 886377 CDS YP_004789231.1 344204088 11055634 3063010..3064056 1 NC_015945.1 PFAM: Response regulator receiver domain; TIGRFAM: PAS domain S-box; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR000014:IPR001789; KEGG: mtt:Ftrac_2272 pas/pac sensor protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; PAS; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS; putative PAS/PAC sensor protein 3064056 11055634 Murru_2785 Muricauda ruestringensis DSM 13258 putative PAS/PAC sensor protein YP_004789231.1 3063010 D 886377 CDS YP_004789232.1 344204089 11055635 3064028..3064414 1 NC_015945.1 PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: mtt:Ftrac_2399 response regulator receiver; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Response regulator receiver protein; response regulator receiver protein 3064414 11055635 Murru_2786 Muricauda ruestringensis DSM 13258 response regulator receiver protein YP_004789232.1 3064028 D 886377 CDS YP_004789233.1 344204090 11055636 complement(3064531..3066027) 1 NC_015945.1 PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: phe:Phep_1714 ATP-binding region ATPase domain protein; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Membrane protein, putative; integral membrane sensor signal transduction histidine kinase 3066027 11055636 Murru_2787 Muricauda ruestringensis DSM 13258 integral membrane sensor signal transduction histidine kinase YP_004789233.1 3064531 R 886377 CDS YP_004789234.1 344204091 11055637 3066481..3067668 1 NC_015945.1 PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594:IPR003018; KEGG: dfe:Dfer_1089 GAF sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; GAF; SMART: ATPase-like, ATP-binding domain; SPTR: Putative histidine kinase response regulator hybrid protein; GAF sensor signal transduction histidine kinase 3067668 11055637 Murru_2788 Muricauda ruestringensis DSM 13258 GAF sensor signal transduction histidine kinase YP_004789234.1 3066481 D 886377 CDS YP_004789235.1 344204092 11055638 3068153..3068734 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR014327:IPR007627:IPR013249; KEGG: bfs:BF1197 putative ECF-type RNA polymerase sigma factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: Putative RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 3068734 11055638 Murru_2789 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004789235.1 3068153 D 886377 CDS YP_004789236.1 344204093 11055639 3068804..3069748 1 NC_015945.1 PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: bfs:BF3641 putative transmembrane sensor/regulatory protein; PFAM: FecR protein; SPTR: Putative uncharacterized protein; anti-FecI sigma factor FecR 3069748 11055639 Murru_2790 Muricauda ruestringensis DSM 13258 anti-FecI sigma factor FecR YP_004789236.1 3068804 D 886377 CDS YP_004789237.1 344204094 11055640 3069844..3073266 1 NC_015945.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR011662:IPR012910:IPR000531; KEGG: pdi:BDI_1624 hypothetical protein; PFAM: TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent receptor, beta-barrel; SMART: Secretin/TonB, short N-terminal; SPTR: Outer membrane protein; TonB-dependent receptor plug 3073266 11055640 Murru_2791 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004789237.1 3069844 D 886377 CDS YP_004789238.1 344204095 11055641 3073284..3074858 1 NC_015945.1 PFAM: SusD family; InterPro IPR012944; KEGG: pdi:BDI_1622 hypothetical protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 3074858 11055641 Murru_2792 Muricauda ruestringensis DSM 13258 RagB/SusD domain-containing protein YP_004789238.1 3073284 D 886377 CDS YP_004789239.1 344204096 11055642 3075027..3076751 1 NC_015945.1 PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR003953; KEGG: rbi:RB2501_09520 GMC oxidoreductase family protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: GMC oxidoreductase family protein; manually curated; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 3076751 11055642 Murru_2793 Muricauda ruestringensis DSM 13258 fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein YP_004789239.1 3075027 D 886377 CDS YP_004789240.1 344204097 11055643 3076756..3077466 1 NC_015945.1 KEGG: rbi:RB2501_09525 Tat (twin-arginine translocation) pathway signal sequence domain-containing protein; SPTR: Tat (Twin-arginine translocation) pathway signal sequence domain protein; Tat (twin-arginine translocation) pathway signal sequence domain-containing protein 3077466 11055643 Murru_2794 Muricauda ruestringensis DSM 13258 Tat (twin-arginine translocation) pathway signal sequence domain-containing protein YP_004789240.1 3076756 D 886377 CDS YP_004789241.1 344204098 11055644 3077666..3080422 1 NC_015945.1 InterPro IPR000792:IPR013249; KEGG: rbi:RB2501_07285 hypothetical protein; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SMART: Transcription regulator LuxR, C-terminal; SPTR: Putative uncharacterized protein; sigma-70 region 4 type 2 3080422 11055644 Murru_2795 Muricauda ruestringensis DSM 13258 sigma-70 region 4 type 2 YP_004789241.1 3077666 D 886377 CDS YP_004789242.1 344204099 11055645 3080656..3083706 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: rbi:RB2501_07290 putative TonB-linked outer membrane protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative TonB-linked outer membrane protein; TonB-dependent receptor plug 3083706 11055645 Murru_2796 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004789242.1 3080656 D 886377 CDS YP_004789243.1 344204100 11055646 3083720..3085270 1 NC_015945.1 PFAM: SusD family; InterPro IPR012944; KEGG: rbi:RB2501_07295 hypothetical protein; PFAM: RagB/SusD; SPTR: Putative outer membrane protein probably involved in nutrient binding; RagB/SusD domain-containing protein 3085270 11055646 Murru_2797 Muricauda ruestringensis DSM 13258 RagB/SusD domain-containing protein YP_004789243.1 3083720 D 886377 CDS YP_004789244.1 344204101 11055647 3085295..3087667 1 NC_015945.1 KEGG: rbi:RB2501_07300 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3087667 11055647 Murru_2798 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789244.1 3085295 D 886377 CDS YP_004789245.1 344204102 11055648 3087722..3089098 1 NC_015945.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2329); COGs: COG5368 conserved hypothetical protein; InterPro IPR019282; KEGG: rbi:RB2501_07305 hypothetical protein; PFAM: Protein of unknown function DUF2329; SPTR: Putative uncharacterized protein; hypothetical protein 3089098 11055648 Murru_2799 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789245.1 3087722 D 886377 CDS YP_004789246.1 344204103 11055649 3089091..3090470 1 NC_015945.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2329); COGs: COG5368 conserved hypothetical protein; InterPro IPR019282; KEGG: rbi:RB2501_07310 hypothetical protein; PFAM: Protein of unknown function DUF2329; SPTR: Putative uncharacterized protein; hypothetical protein 3090470 11055649 Murru_2800 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789246.1 3089091 D 886377 CDS YP_004789247.1 344204104 11055650 3090472..3091278 1 NC_015945.1 PFAM: Phospholipase/Carboxylesterase; COGs: COG4099 peptidase; InterPro IPR003140; KEGG: rbi:RB2501_07315 hypothetical protein; PFAM: Phospholipase/carboxylesterase; SPTR: Putative uncharacterized protein; phospholipase/carboxylesterase 3091278 11055650 Murru_2801 Muricauda ruestringensis DSM 13258 phospholipase/carboxylesterase YP_004789247.1 3090472 D 886377 CDS YP_004789248.1 344204105 11055651 3091305..3093572 1 NC_015945.1 PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764:IPR002772; KEGG: gfo:GFO_0367 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal; PRIAM: Beta-glucosidase; SPTR: Glycoside hydrolase, family 3-likely beta-glucosidase; beta-glucosidase 3093572 11055651 Murru_2802 Muricauda ruestringensis DSM 13258 beta-glucosidase YP_004789248.1 3091305 D 886377 CDS YP_004789249.1 344204106 11055652 3093580..3095208 1 NC_015945.1 PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: zpr:ZPR_3504 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase; sulfatase 3095208 11055652 Murru_2803 Muricauda ruestringensis DSM 13258 sulfatase YP_004789249.1 3093580 D 886377 CDS YP_004789250.1 344204107 11055653 3095249..3096175 1 NC_015945.1 PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, TerC family; COGs: COG0861 Membrane protein TerC possibly involved in tellurium resistance; InterPro IPR005496; KEGG: fjo:Fjoh_2343 integral membrane protein TerC; PFAM: Integral membrane protein TerC; SPTR: Integral membrane protein TerC; integral membrane protein TerC 3096175 11055653 Murru_2804 Muricauda ruestringensis DSM 13258 integral membrane protein TerC YP_004789250.1 3095249 D 886377 CDS YP_004789251.1 344204108 11055654 3096205..3096303 1 NC_015945.1 hypothetical protein 3096303 11055654 Murru_2805 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789251.1 3096205 D 886377 CDS YP_004789252.1 344204109 11055655 complement(3096345..3098504) 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: rbi:RB2501_01086 putative TonB-dependent outer membrane receptor protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative TonB-dependent outer membrane receptor protein; TonB-dependent receptor plug 3098504 11055655 Murru_2806 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004789252.1 3096345 R 886377 CDS YP_004789253.1 344204110 11055656 complement(3099014..3099589) 1 NC_015945.1 PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: dfe:Dfer_0358 putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; SPTR: Cyclic nucleotide binding-regulatory protein; putative Crp/Fnr family transcriptional regulator 3099589 11055656 Murru_2807 Muricauda ruestringensis DSM 13258 putative Crp/Fnr family transcriptional regulator YP_004789253.1 3099014 R 886377 CDS YP_004789254.1 344204111 11055657 3099837..3100844 1 NC_015945.1 PFAM: Aldo/keto reductase family; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR023210; KEGG: phe:Phep_2077 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain; SPTR: Aldo/keto reductase; NADP-dependent oxidoreductase domain-containing protein 3100844 11055657 Murru_2808 Muricauda ruestringensis DSM 13258 NADP-dependent oxidoreductase domain-containing protein YP_004789254.1 3099837 D 886377 CDS YP_004789255.1 344204112 11055658 3100938..3101681 1 NC_015945.1 PFAM: NIPSNAP; InterPro IPR012577; KEGG: rbi:RB2501_11937 hypothetical protein; PFAM: NIPSNAP; SPTR: Putative uncharacterized protein; NIPSNAP family containing protein 3101681 11055658 Murru_2809 Muricauda ruestringensis DSM 13258 NIPSNAP family containing protein YP_004789255.1 3100938 D 886377 CDS YP_004789256.1 344204113 11055659 complement(3101909..3102289) 1 NC_015945.1 PFAM: Bacterial-like globin; COGs: COG2346 Truncated hemoglobins; KEGG: mtt:Ftrac_2727 globin family protein; SPTR: Bacterial-like globin family protein; globin family protein 3102289 11055659 Murru_2810 Muricauda ruestringensis DSM 13258 globin family protein YP_004789256.1 3101909 R 886377 CDS YP_004789257.1 344204114 11055660 complement(3102309..3102656) 1 NC_015945.1 KEGG: fjo:Fjoh_1582 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3102656 11055660 Murru_2811 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789257.1 3102309 R 886377 CDS YP_004789258.1 344204115 11055661 complement(3102732..3103460) 1 NC_015945.1 PFAM: Domain of Unknown function (DUF542); Hemerythrin HHE cation binding domain; TIGRFAM: iron-sulfur cluster repair di-iron protein; COGs: COG2846 Regulator of cell morphogenesis and NO signaling; InterPro IPR019903:IPR007500:IPR012312; KEGG: gfo:GFO_1401 nitric oxide-dependent regulator; PFAM: Domain of unknown function DUF542, ScdA N-terminal; Haemerythrin/HHE cation-binding motif; SPTR: Nitric oxide-dependent regulator; TIGRFAM: Iron-sulfur cluster repair di-iron protein; iron-sulfur cluster repair di-iron protein 3103460 11055661 Murru_2812 Muricauda ruestringensis DSM 13258 iron-sulfur cluster repair di-iron protein YP_004789258.1 3102732 R 886377 CDS YP_004789259.1 344204116 11055662 complement(3103525..3103959) 1 NC_015945.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: gfo:GFO_1399 Rrf2-like transcriptional regulator protein; PFAM: Transcription regulator Rrf2; SPTR: Rrf2-like transcriptional regulator protein; TIGRFAM: Transcription regulator Rrf2; BadM/Rrf2 family transcriptional regulator 3103959 11055662 Murru_2813 Muricauda ruestringensis DSM 13258 BadM/Rrf2 family transcriptional regulator YP_004789259.1 3103525 R 886377 CDS YP_004789260.1 344204117 11055663 complement(3104103..3105305) 1 NC_015945.1 KEGG: fbc:FB2170_03765 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3105305 11055663 Murru_2814 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789260.1 3104103 R 886377 CDS YP_004789261.1 344204118 11055664 complement(3105335..3106117) 1 NC_015945.1 KEGG: fbc:FB2170_03770 hypothetical protein; SPTR: Hypothetical nitrous oxide metabolic protein; hypothetical protein 3106117 11055664 Murru_2815 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789261.1 3105335 R 886377 CDS YP_004789262.1 344204119 11055665 complement(3106110..3106823) 1 NC_015945.1 PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_03775 putative ABC transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative ABC transporter; ABC transporter-like protein 3106823 11055665 Murru_2816 Muricauda ruestringensis DSM 13258 ABC transporter-like protein YP_004789262.1 3106110 R 886377 CDS YP_004789263.1 344204120 11055666 complement(3106820..3108088) 1 NC_015945.1 PFAM: Periplasmic copper-binding protein (NosD); TIGRFAM: parallel beta-helix repeat (two copies); COGs: COG3420 Nitrous oxidase accessory protein; InterPro IPR006633:IPR006626:IPR007742; KEGG: fbc:FB2170_03780 NosD; PFAM: Periplasmic copper-binding; SMART: Carbohydrate-binding/sugar hydrolysis domain; Parallel beta-helix repeat; SPTR: NosD; copper-binding protein 3108088 11055666 Murru_2817 Muricauda ruestringensis DSM 13258 copper-binding protein YP_004789263.1 3106820 R 886377 CDS YP_004789264.1 344204121 11055667 complement(3108174..3108641) 1 NC_015945.1 COGs: COG3467 flavin-nucleotide-binding protein; KEGG: rbi:RB2501_13054 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3108641 11055667 Murru_2818 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789264.1 3108174 R 886377 CDS YP_004789265.1 344204122 11055668 complement(3108644..3109078) 1 NC_015945.1 PFAM: NosL; KEGG: fbc:FB2170_03790 hypothetical protein; SPTR: Hypothetical lipoprotein; hypothetical protein 3109078 11055668 Murru_2819 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789265.1 3108644 R 886377 CDS YP_004789266.1 344204123 11055669 complement(3109081..3109701) 1 NC_015945.1 InterPro IPR019931; KEGG: rbi:RB2501_05460 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: LPXTG-motif cell wall anchor; LPXTG-motif cell wall anchor domain-containing protein 3109701 11055669 Murru_2820 Muricauda ruestringensis DSM 13258 LPXTG-motif cell wall anchor domain-containing protein YP_004789266.1 3109081 R 886377 CDS YP_004789267.1 344204124 11055670 complement(3109826..3111778) 1 NC_015945.1 PFAM: Cytochrome C oxidase subunit II, periplasmic domain; COGs: COG4263 Nitrous oxide reductase; InterPro IPR002429; KEGG: rbi:RB2501_05465 nitrous oxide reductase; PFAM: Cytochrome c oxidase subunit II C-terminal; PRIAM: Nitrous-oxide reductase; SPTR: Nitrous oxide reductase; nitrous-oxide reductase 3111778 11055670 Murru_2821 Muricauda ruestringensis DSM 13258 nitrous-oxide reductase YP_004789267.1 3109826 R 886377 CDS YP_004789268.1 344204125 11055671 complement(3111804..3112385) 1 NC_015945.1 PFAM: Fasciclin domain; COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: fbc:FB2170_03805 hypothetical protein; PFAM: FAS1 domain; SMART: FAS1 domain; SPTR: Putative uncharacterized protein; beta-Ig-H3/fasciclin 3112385 11055671 Murru_2822 Muricauda ruestringensis DSM 13258 beta-Ig-H3/fasciclin YP_004789268.1 3111804 R 886377 CDS YP_004789269.1 344204126 11055672 complement(3112391..3112903) 1 NC_015945.1 PFAM: Cytochrome c; InterPro IPR003088; KEGG: fbc:FB2170_03810 cytochrome c, class I; PFAM: Cytochrome c, class I; SPTR: Cytochrome c, class I; cytochrome c class I 3112903 11055672 Murru_2823 Muricauda ruestringensis DSM 13258 cytochrome c class I YP_004789269.1 3112391 R 886377 CDS YP_004789270.1 344204127 11055673 3113020..3113451 1 NC_015945.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: rbi:RB2501_05485 hypothetical protein; PFAM: Transcription regulator Rrf2; SPTR: Putative uncharacterized protein; TIGRFAM: Transcription regulator Rrf2; BadM/Rrf2 family transcriptional regulator 3113451 11055673 Murru_2824 Muricauda ruestringensis DSM 13258 BadM/Rrf2 family transcriptional regulator YP_004789270.1 3113020 D 886377 CDS YP_004789271.1 344204128 11055674 complement(3113469..3114056) 1 NC_015945.1 COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; HAMAP: Molybdopterin-guanine dinucleotide biosynthesis protein A; InterPro IPR013482; KEGG: fjo:Fjoh_4642 molybdopterin-guanine dinucleotide biosynthesis protein A-like protein; SPTR: Probable molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein MobA 3114056 11055674 Murru_2825 Muricauda ruestringensis DSM 13258 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_004789271.1 3113469 R 886377 CDS YP_004789272.1 344204129 11055675 complement(3114050..3114427) 1 NC_015945.1 KEGG: rbi:RB2501_01196 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3114427 11055675 Murru_2826 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789272.1 3114050 R 886377 CDS YP_004789273.1 344204130 11055676 3114623..3116239 1 NC_015945.1 PFAM: Carboxylesterase; COGs: COG2272 Carboxylesterase type B; InterPro IPR002018; KEGG: sli:Slin_4145 carboxylesterase; PFAM: Carboxylesterase, type B; SPTR: Carboxylesterase; carboxylesterase type B 3116239 11055676 Murru_2827 Muricauda ruestringensis DSM 13258 carboxylesterase type B YP_004789273.1 3114623 D 886377 CDS YP_004789274.1 344204131 11055677 complement(3116384..3117427) 1 NC_015945.1 PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR019949:IPR016048; KEGG: zpr:ZPR_1059 luciferase-like monooxygenase; PFAM: Luciferase-like, subgroup; SPTR: Putative uncharacterized protein; TIGRFAM: Luciferase family oxidoreductase, group 1; luciferase family oxidoreductase 3117427 11055677 Murru_2828 Muricauda ruestringensis DSM 13258 luciferase family oxidoreductase YP_004789274.1 3116384 R 886377 CDS YP_004789275.1 344204132 11055678 complement(3117464..3117733) 1 NC_015945.1 PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: zpr:ZPR_1058 regulatory protein, ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Regulatory protein, ArsR; regulatory protein ArsR 3117733 11055678 Murru_2829 Muricauda ruestringensis DSM 13258 regulatory protein ArsR YP_004789275.1 3117464 R 886377 CDS YP_004789276.1 344204133 11055679 complement(3117925..3119322) 1 NC_015945.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: lby:Lbys_0609 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein; oxidoreductase domain-containing protein 3119322 11055679 Murru_2830 Muricauda ruestringensis DSM 13258 oxidoreductase domain-containing protein YP_004789276.1 3117925 R 886377 CDS YP_004789277.1 344204134 11055680 complement(3119347..3120705) 1 NC_015945.1 PFAM: WD40-like Beta Propeller Repeat; COGs: COG0823 Periplasmic component of the Tol biopolymer transport system; InterPro IPR011659; KEGG: fbc:FB2170_00745 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3120705 11055680 Murru_2831 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789277.1 3119347 R 886377 CDS YP_004789278.1 344204135 11055681 complement(3120761..3121462) 1 NC_015945.1 PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: gfo:GFO_1948 GDSL-like lipase/acylhydrolase; PFAM: Lipase, GDSL; PRIAM: Arylesterase; SPTR: GDSL-like lipase/acylhydrolase; arylesterase 3121462 11055681 Murru_2832 Muricauda ruestringensis DSM 13258 arylesterase YP_004789278.1 3120761 R 886377 CDS YP_004789279.1 344204136 11055682 3121506..3122183 1 NC_015945.1 PFAM: ABC transporter; COGs: COG4181 ABC-type transport system involved in lysophospholipase L1 biosynthesis ATPase component; InterPro IPR003593:IPR003439; KEGG: gfo:GFO_1949 ABC-type transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type transporter ATP-binding protein; phosphonate-transporting ATPase 3122183 11055682 Murru_2833 Muricauda ruestringensis DSM 13258 phosphonate-transporting ATPase YP_004789279.1 3121506 D 886377 CDS YP_004789280.1 344204137 11055683 3122185..3124722 1 NC_015945.1 PFAM: Predicted permease; COGs: COG3127 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component; InterPro IPR003838; KEGG: gfo:GFO_1950 FtsX family membrane protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: FtsX family membrane protein (Predicted permease); hypothetical protein 3124722 11055683 Murru_2834 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789280.1 3122185 D 886377 CDS YP_004789281.1 344204138 11055684 3125029..3126483 1 NC_015945.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: rbi:RB2501_06065 putative outer membrane protein; PFAM: Outer membrane efflux protein; SPTR: Probable outer membrane protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein 3126483 11055684 Murru_2835 Muricauda ruestringensis DSM 13258 NodT family RND efflux system outer membrane lipoprotein YP_004789281.1 3125029 D 886377 CDS YP_004789282.1 344204139 11055685 3126473..3127681 1 NC_015945.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: rbi:RB2501_06070 putative RND efflux membrane fusion protein; PFAM: Secretion protein HlyD; SPTR: Probable RND efflux membrane fusion protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 3127681 11055685 Murru_2836 Muricauda ruestringensis DSM 13258 RND family efflux transporter MFP subunit YP_004789282.1 3126473 D 886377 CDS YP_004789283.1 344204140 11055686 3127690..3130836 1 NC_015945.1 PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: rbi:RB2501_06075 putative multidrug resistance protein; PFAM: Acriflavin resistance protein; SPTR: Probable multidrug resistance protein; acriflavin resistance protein 3130836 11055686 Murru_2837 Muricauda ruestringensis DSM 13258 acriflavin resistance protein YP_004789283.1 3127690 D 886377 CDS YP_004789284.1 344204141 11055687 3130922..3131764 1 NC_015945.1 PFAM: ATP cone domain; Restriction endonuclease; KEGG: fbc:FB2170_14453 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3131764 11055687 Murru_2838 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789284.1 3130922 D 886377 CDS YP_004789285.1 344204142 11055688 3131771..3133141 1 NC_015945.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR001279:IPR011108; KEGG: fbc:FB2170_14448 hypothetical protein; PFAM: Beta-lactamase-like; RNA-metabolising metallo-beta-lactamase; SMART: Beta-lactamase-like; SPTR: Putative uncharacterized protein; beta-lactamase domain-containing protein 3133141 11055688 Murru_2839 Muricauda ruestringensis DSM 13258 beta-lactamase domain-containing protein YP_004789285.1 3131771 D 886377 CDS YP_004789286.1 344204143 11055689 complement(3133149..3133802) 1 NC_015945.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase; COGs: COG0035 Uracil phosphoribosyltransferase; InterPro IPR000836; KEGG: fbc:FB2170_14863 uracil phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Uracil phosphoribosyltransferase; phosphoribosyltransferase 3133802 11055689 Murru_2840 Muricauda ruestringensis DSM 13258 phosphoribosyltransferase YP_004789286.1 3133149 R 886377 CDS YP_004789287.1 344204144 11055690 3133979..3134893 1 NC_015945.1 PFAM: DnaJ C terminal region; DnaJ domain; COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR001623:IPR002939; KEGG: rbi:RB2501_11867 putative chaperone; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Putative chaperone; chaperone DnaJ domain-containing protein 3134893 11055690 Murru_2841 Muricauda ruestringensis DSM 13258 chaperone DnaJ domain-containing protein YP_004789287.1 3133979 D 886377 CDS YP_004789288.1 344204145 11055691 3134900..3135190 1 NC_015945.1 KEGG: fjo:Fjoh_2373 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3135190 11055691 Murru_2842 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789288.1 3134900 D 886377 CDS YP_004789289.1 344204146 11055692 3135331..3136152 1 NC_015945.1 PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: fbc:FB2170_14553 universal stress protein; PFAM: UspA; SPTR: Universal stress protein; UspA domain-containing protein 3136152 11055692 Murru_2843 Muricauda ruestringensis DSM 13258 UspA domain-containing protein YP_004789289.1 3135331 D 886377 CDS YP_004789290.1 344204147 11055693 complement(3136153..3136560) 1 NC_015945.1 KEGG: fbc:FB2170_14548 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3136560 11055693 Murru_2844 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789290.1 3136153 R 886377 CDS YP_004789291.1 344204148 11055694 3136680..3138176 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR000014:IPR001610:IPR003661:IPR003594:IPR 013767; KEGG: zpr:ZPR_2014 sensory transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; PAC motif; SPTR: Sensor histidine kinase; TIGRFAM: PAS; PAS/PAC sensor signal transduction histidine kinase 3138176 11055694 Murru_2845 Muricauda ruestringensis DSM 13258 PAS/PAC sensor signal transduction histidine kinase YP_004789291.1 3136680 D 886377 CDS YP_004789292.1 344204149 11055695 3138154..3139203 1 NC_015945.1 PFAM: Response regulator receiver domain; Cyclic nucleotide-binding domain; COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR001789:IPR000595:IPR001808; KEGG: zpr:ZPR_2015 putative diguanylate phosphodiesterase (EAL domain) with response regulator receiver modulation; PFAM: Signal transduction response regulator, receiver domain; Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: Signal transduction response regulator, receiver domain; Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SPTR: Putative diguanylate phosphodiesterase (EAL domain) with Response Regulator Receiver modulation; response regulator receiver protein 3139203 11055695 Murru_2846 Muricauda ruestringensis DSM 13258 response regulator receiver protein YP_004789292.1 3138154 D 886377 CDS YP_004789293.1 344204150 11055696 3139291..3140127 1 NC_015945.1 PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: fbc:FB2170_14488 hypothetical protein; PFAM: UspA; SPTR: Universal stress protein; UspA domain-containing protein 3140127 11055696 Murru_2847 Muricauda ruestringensis DSM 13258 UspA domain-containing protein YP_004789293.1 3139291 D 886377 CDS YP_004789294.1 344204151 11055697 3140282..3141124 1 NC_015945.1 PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: fbc:FB2170_14468 putative universal stress protein UspA; PFAM: UspA; SPTR: Putative universal stress protein UspA; UspA domain-containing protein 3141124 11055697 Murru_2848 Muricauda ruestringensis DSM 13258 UspA domain-containing protein YP_004789294.1 3140282 D 886377 CDS YP_004789295.1 344204152 11055698 3141134..3141943 1 NC_015945.1 PFAM: Universal stress protein family; InterPro IPR006016; KEGG: fbc:FB2170_14463 putative universal stress protein UspA; PFAM: UspA; SPTR: Universal stress protein; UspA domain-containing protein 3141943 11055698 Murru_2849 Muricauda ruestringensis DSM 13258 UspA domain-containing protein YP_004789295.1 3141134 D 886377 CDS YP_004789296.1 344204153 11055699 3142002..3142853 1 NC_015945.1 PFAM: Universal stress protein family; InterPro IPR006016; KEGG: fbc:FB2170_14488 hypothetical protein; PFAM: UspA; SPTR: Universal stress protein; UspA domain-containing protein 3142853 11055699 Murru_2850 Muricauda ruestringensis DSM 13258 UspA domain-containing protein YP_004789296.1 3142002 D 886377 CDS YP_004789297.1 344204154 11055700 3142867..3143295 1 NC_015945.1 KEGG: fbc:FB2170_14458 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3143295 11055700 Murru_2851 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789297.1 3142867 D 886377 CDS YP_004789298.1 344204155 11055701 3143380..3143784 1 NC_015945.1 KEGG: fbc:FB2170_14443 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3143784 11055701 Murru_2852 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789298.1 3143380 D 886377 CDS YP_004789299.1 344204156 11055702 3143862..3144302 1 NC_015945.1 PFAM: Hsp20/alpha crystallin family; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: fbc:FB2170_00355 small heat shock protein; PFAM: Heat shock protein Hsp20; SPTR: Small heat shock protein; heat shock protein Hsp20 3144302 11055702 Murru_2853 Muricauda ruestringensis DSM 13258 heat shock protein Hsp20 YP_004789299.1 3143862 D 886377 CDS YP_004789300.1 344204157 11055703 3144354..3144797 1 NC_015945.1 KEGG: fbc:FB2170_14433 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3144797 11055703 Murru_2854 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789300.1 3144354 D 886377 CDS YP_004789301.1 344204158 11055704 3144819..3145826 1 NC_015945.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: fbc:FB2170_14423 D-lactate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; PRIAM: D-lactate dehydrogenase; SPTR: D-lactate dehydrogenase; D-lactate dehydrogenase 3145826 11055704 Murru_2855 Muricauda ruestringensis DSM 13258 D-lactate dehydrogenase YP_004789301.1 3144819 D 886377 CDS YP_004789302.1 344204159 11055705 complement(3145821..3147254) 1 NC_015945.1 PFAM: Phospholipase D Active site motif; COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: fbc:FB2170_14418 cardiolipin synthetase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; SPTR: Cardiolipin synthetase; phospholipase D 3147254 11055705 Murru_2856 Muricauda ruestringensis DSM 13258 phospholipase D YP_004789302.1 3145821 R 886377 CDS YP_004789303.1 344204160 11055706 3147626..3149266 1 NC_015945.1 PFAM: Putative modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR006311:IPR002510; KEGG: gfo:GFO_1941 DNA gyrase modulator family protein; PFAM: Peptidase U62, modulator of DNA gyrase; SPTR: DNA gyrase modulator family protein; peptidase U62 modulator of DNA gyrase 3149266 11055706 Murru_2857 Muricauda ruestringensis DSM 13258 peptidase U62 modulator of DNA gyrase YP_004789303.1 3147626 D 886377 CDS YP_004789304.1 344204161 11055707 3149294..3150610 1 NC_015945.1 PFAM: Putative modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: rbi:RB2501_09465 TldD/PmbA family protein; PFAM: Peptidase U62, modulator of DNA gyrase; SPTR: TldD/PmbA family protein; peptidase U62 modulator of DNA gyrase 3150610 11055707 Murru_2858 Muricauda ruestringensis DSM 13258 peptidase U62 modulator of DNA gyrase YP_004789304.1 3149294 D 886377 CDS YP_004789305.1 344204162 11055708 3150697..3151323 1 NC_015945.1 KEGG: rbi:RB2501_09470 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3151323 11055708 Murru_2859 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789305.1 3150697 D 886377 CDS YP_004789306.1 344204163 11055709 3151334..3152338 1 NC_015945.1 PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0714 MoxR-like ATPase; InterPro IPR011703; KEGG: rbi:RB2501_09475 MoxR protein; PFAM: ATPase, AAA-3; SPTR: MoxR protein; ATPase 3152338 11055709 Murru_2860 Muricauda ruestringensis DSM 13258 ATPase YP_004789306.1 3151334 D 886377 CDS YP_004789307.1 344204164 11055710 3152338..3153237 1 NC_015945.1 PFAM: Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: rbi:RB2501_09480 hypothetical protein; PFAM: Domain of unknown function DUF58; SPTR: Putative uncharacterized protein; hypothetical protein 3153237 11055710 Murru_2861 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789307.1 3152338 D 886377 CDS YP_004789308.1 344204165 11055711 3153238..3154509 1 NC_015945.1 PFAM: Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain; InterPro IPR011933; KEGG: rbi:RB2501_09485 hypothetical protein; PFAM: Double transmembrane domain; SPTR: Putative uncharacterized protein; TIGRFAM: Double transmembrane domain; double-transmembrane region domain-containing protein 3154509 11055711 Murru_2862 Muricauda ruestringensis DSM 13258 double-transmembrane region domain-containing protein YP_004789308.1 3153238 D 886377 CDS YP_004789309.1 344204166 11055712 3154509..3156749 1 NC_015945.1 KEGG: rbi:RB2501_09490 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3156749 11055712 Murru_2863 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789309.1 3154509 D 886377 CDS YP_004789310.1 344204167 11055713 3156742..3158505 1 NC_015945.1 KEGG: gfo:GFO_1934 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3158505 11055713 Murru_2864 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789310.1 3156742 D 886377 CDS YP_004789311.1 344204168 11055714 complement(3158553..3159434) 1 NC_015945.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: cat:CA2559_09106 cobalt-zinc-cadmium resistance protein CzcD; PFAM: Cation efflux protein; SPTR: Cobalt-zinc-cadmium resistance protein czcD; TIGRFAM: Cation efflux protein; cation diffusion facilitator family transporter 3159434 11055714 Murru_2865 Muricauda ruestringensis DSM 13258 cation diffusion facilitator family transporter YP_004789311.1 3158553 R 886377 CDS YP_004789312.1 344204169 11055715 complement(3159564..3162284) 1 NC_015945.1 PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosphate dikinase; COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterPro IPR010121:IPR002192:IPR008279:IPR000121; KEGG: rbi:RB2501_13514 pyruvate phosphate dikinase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme; PRIAM: Pyruvate, phosphate dikinase; SPTR: Pyruvate phosphate dikinase; TIGRFAM: Pyruvate, phosphate dikinase; pyruvate, phosphate dikinase 3162284 11055715 Murru_2866 Muricauda ruestringensis DSM 13258 pyruvate, phosphate dikinase YP_004789312.1 3159564 R 886377 CDS YP_004789313.1 344204170 11055716 3162626..3163228 1 NC_015945.1 PFAM: YceI-like domain; InterPro IPR007372; KEGG: rbi:RB2501_13519 tRNA modification GTPase; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like; SPTR: tRNA modification GTPase; hypothetical protein 3163228 11055716 Murru_2867 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789313.1 3162626 D 886377 CDS YP_004789314.1 344204171 11055717 3163264..3164526 1 NC_015945.1 KEGG: rbi:RB2501_13524 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3164526 11055717 Murru_2868 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789314.1 3163264 D 886377 CDS YP_004789315.1 344204172 11055718 3164605..3165204 1 NC_015945.1 PFAM: YceI-like domain; InterPro IPR007372; KEGG: rbi:RB2501_13529 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: Putative uncharacterized protein; hypothetical protein 3165204 11055718 Murru_2869 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789315.1 3164605 D 886377 CDS YP_004789316.1 344204173 11055719 3165346..3166212 1 NC_015945.1 PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: rbi:RB2501_13039 sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Sugar phosphate isomerase/epimerase; xylose isomerase domain-containing protein 3166212 11055719 Murru_2870 Muricauda ruestringensis DSM 13258 xylose isomerase domain-containing protein YP_004789316.1 3165346 D 886377 CDS YP_004789317.1 344204174 11055721 complement(3166989..3167987) 1 NC_015945.1 PFAM: Aldo/keto reductase family; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR023210; KEGG: pcu:pc0543 MocA family oxidoreductase; PFAM: NADP-dependent oxidoreductase domain; PRIAM: Aryl-alcohol dehydrogenase (NADP(+)); SPTR: Aldo/keto family dehydrogenase; aryl-alcohol dehydrogenase 3167987 11055721 Murru_2871 Muricauda ruestringensis DSM 13258 aryl-alcohol dehydrogenase YP_004789317.1 3166989 R 886377 CDS YP_004789318.1 344204175 11055722 complement(3168011..3169246) 1 NC_015945.1 PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: btk:BT9727_4773 major facilitator transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator family transporter; major facilitator superfamily protein 3169246 11055722 Murru_2872 Muricauda ruestringensis DSM 13258 major facilitator superfamily protein YP_004789318.1 3168011 R 886377 CDS YP_004789319.1 344204176 11055723 complement(3169281..3169856) 1 NC_015945.1 PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: cpi:Cpin_5404 putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; SPTR: Putative transcriptional regulator, Crp/Fnr family; putative Crp/Fnr family transcriptional regulator 3169856 11055723 Murru_2873 Muricauda ruestringensis DSM 13258 putative Crp/Fnr family transcriptional regulator YP_004789319.1 3169281 R 886377 CDS YP_004789320.1 344204177 11055724 complement(3170131..3171207) 1 NC_015945.1 COGs: COG2267 Lysophospholipase; KEGG: rpc:RPC_2739 alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold; alpha/beta hydrolase fold protein 3171207 11055724 Murru_2874 Muricauda ruestringensis DSM 13258 alpha/beta hydrolase fold protein YP_004789320.1 3170131 R 886377 CDS YP_004789321.1 344204178 11055725 3171420..3171896 1 NC_015945.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR001041:IPR002888; KEGG: rbi:RB2501_01016 isoquinoline 1-oxidoreductase subunit alpha; PFAM: [2Fe-2S]-binding; Ferredoxin; PRIAM: Isoquinoline 1-oxidoreductase; SPTR: (2Fe-2S)-binding protein; Isoquinoline 1-oxidoreductase 3171896 11055725 Murru_2875 Muricauda ruestringensis DSM 13258 Isoquinoline 1-oxidoreductase YP_004789321.1 3171420 D 886377 CDS YP_004789322.1 344204179 11055726 3171998..3174151 1 NC_015945.1 PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR006311:IPR000674:IPR008274; KEGG: dfe:Dfer_0019 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; PFAM: Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; PRIAM: Aldehyde dehydrogenase (pyrroloquinoline-quinone); SPTR: Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde dehydrogenase (pyrroloquinoline-quinone) 3174151 11055726 Murru_2876 Muricauda ruestringensis DSM 13258 aldehyde dehydrogenase (pyrroloquinoline-quinone) YP_004789322.1 3171998 D 886377 CDS YP_004789323.1 344204180 11055727 complement(3174414..3175424) 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR018060:IPR000005; KEGG: fjo:Fjoh_0538 helix-turn-helix domain-containing protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: AraC-type DNA-binding domain-containing protein-like protein; AraC family transcriptional regulator 3175424 11055727 Murru_2877 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004789323.1 3174414 R 886377 CDS YP_004789324.1 344204181 11055728 complement(3175427..3175537) 1 NC_015945.1 hypothetical protein 3175537 11055728 Murru_2878 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789324.1 3175427 R 886377 CDS YP_004789325.1 344204182 11055729 complement(3175550..3176002) 1 NC_015945.1 PFAM: Protein of unknown function (DUF1569); KEGG: coc:Coch_1869 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3176002 11055729 Murru_2879 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789325.1 3175550 R 886377 CDS YP_004789326.1 344204183 11055730 complement(3175986..3176420) 1 NC_015945.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: cpi:Cpin_5963 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase; bleomycin resistance protein 3176420 11055730 Murru_2880 Muricauda ruestringensis DSM 13258 bleomycin resistance protein YP_004789326.1 3175986 R 886377 CDS YP_004789327.1 344204184 11055731 complement(3176464..3176961) 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: cpi:Cpin_5964 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: AraC family transcriptional regulator; AraC family transcriptional regulator 3176961 11055731 Murru_2881 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004789327.1 3176464 R 886377 CDS YP_004789328.1 344204185 11055732 complement(3177054..3177701) 1 NC_015945.1 PFAM: Flavodoxin-like fold; COGs: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: cpi:Cpin_4986 ribosyldihydronicotinamide dehydrogenase (quinone); PFAM: Flavodoxin-like fold; PRIAM: NAD(P)H dehydrogenase (quinone); SPTR: Ribosyldihydronicotinamide dehydrogenase (Quinone); NAD(P)H dehydrogenase (quinone) 3177701 11055732 Murru_2882 Muricauda ruestringensis DSM 13258 NAD(P)H dehydrogenase (quinone) YP_004789328.1 3177054 R 886377 CDS YP_004789329.1 344204186 11055733 3177793..3178182 1 NC_015945.1 PFAM: HxlR-like helix-turn-helix; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: abb:ABBFA_002249 HxlR-like helix-turn-helix family protein; PFAM: Helix-turn-helix, HxlR type; SPTR: Transcriptional regulator DUF24 family; HxlR family transcriptional regulator 3178182 11055733 Murru_2883 Muricauda ruestringensis DSM 13258 HxlR family transcriptional regulator YP_004789329.1 3177793 D 886377 CDS YP_004789330.1 344204187 11055734 complement(3178249..3178605) 1 NC_015945.1 PFAM: HxlR-like helix-turn-helix; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: cpi:Cpin_2703 transcriptional regulator, HxlR family; PFAM: Helix-turn-helix, HxlR type; SPTR: Transcriptional regulator; HxlR family transcriptional regulator 3178605 11055734 Murru_2884 Muricauda ruestringensis DSM 13258 HxlR family transcriptional regulator YP_004789330.1 3178249 R 886377 CDS YP_004789331.1 344204188 11055735 3178702..3179232 1 NC_015945.1 PFAM: Flavodoxin-like fold; COGs: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: dfe:Dfer_0739 NAD(P)H dehydrogenase (quinone); PFAM: Flavodoxin-like fold; SPTR: YrkL; NAD(P)H dehydrogenase (quinone) 3179232 11055735 Murru_2885 Muricauda ruestringensis DSM 13258 NAD(P)H dehydrogenase (quinone) YP_004789331.1 3178702 D 886377 CDS YP_004789332.1 344204189 11055736 complement(3179360..3179722) 1 NC_015945.1 PFAM: HxlR-like helix-turn-helix; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: chu:CHU_2490 transcriptional regulator; PFAM: Helix-turn-helix, HxlR type; SPTR: Transcriptional regulator; HxlR family transcriptional regulator 3179722 11055736 Murru_2886 Muricauda ruestringensis DSM 13258 HxlR family transcriptional regulator YP_004789332.1 3179360 R 886377 CDS YP_004789333.1 344204190 11055737 3179819..3180328 1 NC_015945.1 PFAM: DoxX; InterPro IPR011637; KEGG: scl:sce2760 hypothetical protein; PFAM: Uncharacterised protein family YphA; SPTR: Putative uncharacterized protein; DoxX family protein 3180328 11055737 Murru_2887 Muricauda ruestringensis DSM 13258 DoxX family protein YP_004789333.1 3179819 D 886377 CDS YP_004789334.1 344204191 11055738 complement(3181100..3181465) 1 NC_015945.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2200); COGs: COG4898 conserved hypothetical protein; InterPro IPR014580; KEGG: cpi:Cpin_6024 hypothetical protein; PFAM: Uncharacterised conserved protein UCP033199; SPTR: Putative uncharacterized protein; hypothetical protein 3181465 11055738 Murru_2888 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789334.1 3181100 R 886377 CDS YP_004789335.1 344204192 11055739 complement(3181467..3181859) 1 NC_015945.1 PFAM: Domain of unknown function (DU1801); InterPro IPR014922; KEGG: phe:Phep_2410 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: Putative uncharacterized protein; hypothetical protein 3181859 11055739 Murru_2889 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789335.1 3181467 R 886377 CDS YP_004789336.1 344204193 11055740 3182497..3183615 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: gfo:GFO_0172 AraC family transcription regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: AraC family transcriptional regulator protein; AraC family transcriptional regulator 3183615 11055740 Murru_2890 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004789336.1 3182497 D 886377 CDS YP_004789337.1 344204194 11055741 3183818..3184306 1 NC_015945.1 PFAM: Protein of unknown function (DUF3225); KEGG: fbc:FB2170_05335 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3184306 11055741 Murru_2891 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789337.1 3183818 D 886377 CDS YP_004789338.1 344204195 11055742 3184407..3185606 1 NC_015945.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006090; KEGG: ara:Arad_14219 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; SPTR: Acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 3185606 11055742 Murru_2892 Muricauda ruestringensis DSM 13258 acyl-CoA dehydrogenase domain-containing protein YP_004789338.1 3184407 D 886377 CDS YP_004789339.1 344204196 11055743 3186234..3187547 1 NC_015945.1 KEGG: zpr:ZPR_1258 TPR repeat-containing protein; SPTR: Putative uncharacterized protein; hypothetical protein 3187547 11055743 Murru_2893 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789339.1 3186234 D 886377 CDS YP_004789340.1 344204197 11055744 3187550..3188689 1 NC_015945.1 KEGG: gfo:GFO_0834 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3188689 11055744 Murru_2894 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789340.1 3187550 D 886377 CDS YP_004789341.1 344204198 11055745 complement(3188692..3190719) 1 NC_015945.1 PFAM: Sulfatase; COGs: COG1368 Phosphoglycerol transferase and related protein alkaline phosphatase superfamily; InterPro IPR000917; KEGG: gfo:GFO_0833 phosphoglycerol transferase; PFAM: Sulfatase; SPTR: Phosphoglycerol transferase; sulfatase 3190719 11055745 Murru_2895 Muricauda ruestringensis DSM 13258 sulfatase YP_004789341.1 3188692 R 886377 CDS YP_004789342.1 344204199 11055746 3191055..3195026 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR001610:IPR003661:IPR003594:IPR 001789:IPR013767:IPR013655:IPR013656; KEGG: gfo:GFO_0848 two-component system sensor histidine kinase/response regulator hybrid; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-3; PAS fold; PAS fold-4; Signal transduction response regulator, receiver domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; PAC motif; Signal transduction response regulator, receiver domain; SPTR: Two-component system sensor histidine kinase/response regulator hybrid; TIGRFAM: PAS; multi-sensor hybrid histidine kinase 3195026 11055746 Murru_2896 Muricauda ruestringensis DSM 13258 multi-sensor hybrid histidine kinase YP_004789342.1 3191055 D 886377 CDS YP_004789343.1 344204200 11055747 3195104..3195820 1 NC_015945.1 PFAM: Hpt domain; InterPro IPR008207; KEGG: gfo:GFO_0847 two-component response transcriptional regulator; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SPTR: Two-component system response regulator containing Hpt phosphotransfer domain; Hpt domain-containing protein 3195820 11055747 Murru_2897 Muricauda ruestringensis DSM 13258 Hpt domain-containing protein YP_004789343.1 3195104 D 886377 CDS YP_004789344.1 344204201 11055748 3195817..3196185 1 NC_015945.1 PFAM: Response regulator receiver domain; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: gfo:GFO_0846 response regulator receiver domain-containing protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Two-component response regulator; response regulator receiver protein 3196185 11055748 Murru_2898 Muricauda ruestringensis DSM 13258 response regulator receiver protein YP_004789344.1 3195817 D 886377 CDS YP_004789345.1 344204202 11055749 3196186..3197199 1 NC_015945.1 KEGG: zpr:ZPR_2296 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3197199 11055749 Murru_2899 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789345.1 3196186 D 886377 CDS YP_004789346.1 344204203 11055750 3197218..3198651 1 NC_015945.1 PFAM: Glycosyl transferase family 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: zpr:ZPR_2297 transmembrane family-2 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Transmembrane family-2 glycosyl transferase; family 2 glycosyl transferase 3198651 11055750 Murru_2900 Muricauda ruestringensis DSM 13258 family 2 glycosyl transferase YP_004789346.1 3197218 D 886377 CDS YP_004789347.1 344204204 11055751 complement(3198909..3202034) 1 NC_015945.1 PFAM: Y_Y_Y domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Two component regulator propeller; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR011110:IPR011123; KEGG: sli:Slin_1754 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Two component regulator three Y; Two component regulator propeller; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Histidine kinase; histidine kinase 3202034 11055751 Murru_2901 Muricauda ruestringensis DSM 13258 histidine kinase YP_004789347.1 3198909 R 886377 CDS YP_004789348.1 344204205 11055753 3203269..3205644 1 NC_015945.1 PFAM: Cytochrome C and Quinol oxidase polypeptide I; COGs: COG3256 Nitric oxide reductase large subunit; KEGG: gpb:HDN1F_02620 nitric-oxide reductase, subunit B; SPTR: Putative Cytochrome c oxidase subunit I; nitric oxide reductase-like (NorZ); nitric-oxide reductase subunit B 3205644 11055753 Murru_2903 Muricauda ruestringensis DSM 13258 nitric-oxide reductase subunit B YP_004789348.1 3203269 D 886377 CDS YP_004789349.1 344204206 11055754 3205631..3205987 1 NC_015945.1 PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein; COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: cps:CPS_2933 putative 6-pyruvoyl tetrahydropterin synthase; PFAM: 6-pyruvoyl tetrahydropterin synthase-related; SPTR: PreQ(0) biosynthesis protein QueD; TIGRFAM: queuosine biosynthesis protein QueD; queuosine biosynthesis protein QueD 3205987 11055754 Murru_2904 Muricauda ruestringensis DSM 13258 queuosine biosynthesis protein QueD YP_004789349.1 3205631 D 886377 CDS YP_004789350.1 344204207 11055755 complement(3206032..3206484) 1 NC_015945.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: fbc:FB2170_03815 hypothetical protein; PFAM: Transcription regulator Rrf2; SPTR: Putative uncharacterized protein; TIGRFAM: Transcription regulator Rrf2; BadM/Rrf2 family transcriptional regulator 3206484 11055755 Murru_2905 Muricauda ruestringensis DSM 13258 BadM/Rrf2 family transcriptional regulator YP_004789350.1 3206032 R 886377 CDS YP_004789351.1 344204208 11055756 3206664..3207629 1 NC_015945.1 PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit; COGs: COG0379 Quinolinate synthase; HAMAP: Quinolinate synthase A, type 2; InterPro IPR003473:IPR023066; KEGG: mtt:Ftrac_2720 quinolinate synthetase A; PFAM: Quinolinate synthetase A; PRIAM: Quinolinate synthase; SPTR: Quinolinate synthase A; TIGRFAM: Quinolinate synthetase A; quinolinate synthase A 3207629 11055756 Murru_2906 Muricauda ruestringensis DSM 13258 quinolinate synthase A YP_004789351.1 3206664 D 886377 CDS YP_004789352.1 344204209 11055757 3207639..3209207 1 NC_015945.1 PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase; COGs: COG0029 Aspartate oxidase; InterPro IPR005288:IPR003953; KEGG: nve:NEMVE_v1g62053 hypothetical protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; PRIAM: L-aspartate oxidase; SPTR: Predicted protein; TIGRFAM: L-aspartate oxidase; L-aspartate oxidase 3209207 11055757 Murru_2907 Muricauda ruestringensis DSM 13258 L-aspartate oxidase YP_004789352.1 3207639 D 886377 CDS YP_004789353.1 344204210 11055758 complement(3209294..3211102) 1 NC_015945.1 KEGG: fbc:FB2170_02180 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3211102 11055758 Murru_2908 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789353.1 3209294 R 886377 CDS YP_004789354.1 344204211 11055759 complement(3211293..3213146) 1 NC_015945.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; COGs: COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; InterPro IPR014192; KEGG: ilo:IL0188 anaerobic ribonucleoside triphosphate reductase; SPTR: Anaerobic ribonucleoside-triphosphate reductase; TIGRFAM: Anaerobic ribonucleoside-triphosphate reductase class III; anaerobic ribonucleoside-triphosphate reductase 3213146 11055759 Murru_2909 Muricauda ruestringensis DSM 13258 anaerobic ribonucleoside-triphosphate reductase YP_004789354.1 3211293 R 886377 CDS YP_004789355.1 344204212 11055760 complement(3213155..3213604) 1 NC_015945.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; InterPro IPR014191; KEGG: cps:CPS_0093 hypothetical protein; SPTR: Anaerobic ribonucleoside-triphosphate reductase activating protein; TIGRFAM: Anaerobic ribonucleoside-triphosphate reductase activator; anaerobic ribonucleoside-triphosphate reductase activating protein 3213604 11055760 Murru_2910 Muricauda ruestringensis DSM 13258 anaerobic ribonucleoside-triphosphate reductase activating protein YP_004789355.1 3213155 R 886377 CDS YP_004789356.1 344204213 11055762 complement(3214238..3215041) 1 NC_015945.1 KEGG: fbc:FB2170_00315 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3215041 11055762 Murru_2912 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789356.1 3214238 R 886377 CDS YP_004789357.1 344204214 11055763 complement(3215572..3215931) 1 NC_015945.1 PFAM: Helix-turn-helix; COGs: COG5499 transcription regulator containing HTH domain; InterPro IPR001387; KEGG: bfr:BF4068 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; XRE family transcriptional regulator 3215931 11055763 Murru_2913 Muricauda ruestringensis DSM 13258 XRE family transcriptional regulator YP_004789357.1 3215572 R 886377 CDS YP_004789358.1 344204215 11055764 complement(3215934..3216230) 1 NC_015945.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2136); COGs: COG4680 conserved hypothetical protein; InterPro IPR018669; KEGG: bfr:BF4067 hypothetical protein; PFAM: Protein of unknown function DUF2136; SPTR: Putative uncharacterized protein; hypothetical protein 3216230 11055764 Murru_2914 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789358.1 3215934 R 886377 CDS YP_004789359.1 344204216 11055765 complement(3216307..3217677) 1 NC_015945.1 PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: small GTP-binding protein domain; tRNA modification GTPase TrmE; COGs: COG0486 GTPase; HAMAP: tRNA modification GTPase TrmE; InterPro IPR004520:IPR005225:IPR018948:IPR002917; KEGG: fps:FP0630 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related; SPTR: tRNA modification GTPase mnmE; TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; tRNA modification GTPase mnmE 3217677 11055765 Murru_2915 Muricauda ruestringensis DSM 13258 tRNA modification GTPase mnmE YP_004789359.1 3216307 R 886377 CDS YP_004789360.1 344204217 11055766 3217764..3218126 1 NC_015945.1 COGs: COG3296 conserved hypothetical protein; KEGG: rbi:RB2501_13554 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3218126 11055766 Murru_2916 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789360.1 3217764 D 886377 CDS YP_004789361.1 344204218 11055767 complement(3218183..3219301) 1 NC_015945.1 PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit; COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001:IPR022634:IPR022637:IPR022635; KEGG: fbc:FB2170_10186 DNA polymerase III subunit beta; PFAM: DNA polymerase III, beta chain, N-terminal; DNA polymerase III, beta chain, central; DNA polymerase III, beta chain, C-terminal; PRIAM: DNA-directed DNA polymerase; SMART: DNA polymerase III, beta chain; SPTR: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta chain; DNA polymerase III subunit beta 3219301 11055767 Murru_2917 Muricauda ruestringensis DSM 13258 DNA polymerase III subunit beta YP_004789361.1 3218183 R 886377 CDS YP_004789362.1 344204219 11055768 complement(3219422..3221086) 1 NC_015945.1 PFAM: ABC-type uncharacterized transport system; TIGRFAM: gliding-associated putative ABC transporter substrate-binding component GldG; InterPro IPR019863:IPR019196; KEGG: rbi:RB2501_13569 hypothetical protein; PFAM: ABC-type uncharacterised transport system; SPTR: Putative uncharacterized protein; TIGRFAM: Gliding-associated putative ABC transporter substrate-binding GldG; gliding-motility associated ABC transporter substrate-binding component GldG 3221086 11055768 Murru_2918 Muricauda ruestringensis DSM 13258 gliding-motility associated ABC transporter substrate-binding component GldG YP_004789362.1 3219422 R 886377 CDS YP_004789363.1 344204220 11055769 complement(3221086..3221817) 1 NC_015945.1 TIGRFAM: gliding motility-associated ABC transporter permease protein GldF; InterPro IPR019860; KEGG: fps:FP1089 gliding motility protein GldF; SPTR: ABC transporter permease; gliding motility-associated protein; TIGRFAM: Gliding motility-associated ABC transporter permease protein GldF; gliding motility-associated ABC transporter permease GldF 3221817 11055769 Murru_2919 Muricauda ruestringensis DSM 13258 gliding motility-associated ABC transporter permease GldF YP_004789363.1 3221086 R 886377 CDS YP_004789364.1 344204221 11055770 complement(3221920..3222210) 1 NC_015945.1 PFAM: Antibiotic biosynthesis monooxygenase; InterPro IPR007138; KEGG: gfo:GFO_1911 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Putative uncharacterized protein; antibiotic biosynthesis monooxygenase 3222210 11055770 Murru_2920 Muricauda ruestringensis DSM 13258 antibiotic biosynthesis monooxygenase YP_004789364.1 3221920 R 886377 CDS YP_004789365.1 344204222 11055771 complement(3222211..3223041) 1 NC_015945.1 PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase; COGs: COG1912 conserved hypothetical protein; InterPro IPR002747; KEGG: fbc:FB2170_10196 hypothetical protein; PFAM: Protein of unknown function DUF62; SPTR: Putative uncharacterized protein; hypothetical protein 3223041 11055771 Murru_2921 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789365.1 3222211 R 886377 CDS YP_004789366.1 344204223 11055772 3223161..3224120 1 NC_015945.1 PFAM: PhoH-like protein; COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR003714; KEGG: fbc:FB2170_10201 putative phosphate starvation-inducible PhoH-like protein; PFAM: PhoH-like protein; SPTR: Putative phosphate starvation-inducible PhoH-like protein; PhoH family protein 3224120 11055772 Murru_2922 Muricauda ruestringensis DSM 13258 PhoH family protein YP_004789366.1 3223161 D 886377 CDS YP_004789367.1 344204224 11055773 3224128..3225081 1 NC_015945.1 PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; HAMAP: SAICAR synthetase; InterPro IPR001636; KEGG: zpr:ZPR_1837 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; PRIAM: Phosphoribosylaminoimidazolesuccinocarboxamide synthase; SPTR: Phosphoribosylaminoimidazole-succinocarboxamide synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 3225081 11055773 Murru_2923 Muricauda ruestringensis DSM 13258 phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_004789367.1 3224128 D 886377 CDS YP_004789368.1 344204225 11055774 3225227..3225490 1 NC_015945.1 TIGRFAM: putative solute:sodium symporter small subunit; COGs: COG4327 membrane protein; InterPro IPR019886; KEGG: fbc:FB2170_09736 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Sodium symporter small subunit, predicted; putative solute symporter protein 3225490 11055774 Murru_2924 Muricauda ruestringensis DSM 13258 putative solute symporter protein YP_004789368.1 3225227 D 886377 CDS YP_004789369.1 344204226 11055775 3225519..3227234 1 NC_015945.1 PFAM: Sodium:solute symporter family; TIGRFAM: probable sodium:solute symporter, VC_2705 subfamily; transporter, SSS family; COGs: COG4147 symporter; InterPro IPR019899:IPR001734; KEGG: fbc:FB2170_09731 putative sodium/solute symporter; PFAM: Sodium/solute symporter; SPTR: Putative sodium/solute symporter; TIGRFAM: Sodium/solute symporter, VC2705 subfamily; putative sodium symporter protein 3227234 11055775 Murru_2925 Muricauda ruestringensis DSM 13258 putative sodium symporter protein YP_004789369.1 3225519 D 886377 CDS YP_004789370.1 344204227 11055776 3227299..3229206 1 NC_015945.1 PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase; COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR011904:IPR000873; KEGG: fbc:FB2170_09726 acetyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Acetate--CoA ligase; SPTR: Acetate/CoA ligase; TIGRFAM: Acetate-CoA ligase; acetate/CoA ligase 3229206 11055776 Murru_2926 Muricauda ruestringensis DSM 13258 acetate/CoA ligase YP_004789370.1 3227299 D 886377 CDS YP_004789371.1 344204228 11055777 complement(3229334..3229987) 1 NC_015945.1 PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR006055:IPR013520; KEGG: fjo:Fjoh_2479 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease; SPTR: DNA polymerase III, epsilon subunit; Exonuclease RNase T and DNA polymerase III 3229987 11055777 Murru_2927 Muricauda ruestringensis DSM 13258 Exonuclease RNase T and DNA polymerase III YP_004789371.1 3229334 R 886377 CDS YP_004789372.1 344204229 11055778 complement(3229987..3231906) 1 NC_015945.1 PFAM: CBS domain; Putative nucleotidyltransferase substrate binding domain; Cyclic nucleotide-binding domain; Putative nucleotidyltransferase DUF294; COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR000595:IPR000644:IPR005105:IPR018821; KEGG: fjo:Fjoh_2480 CBS domain-containing protein; PFAM: Domain of unknown function DUF294, nucleotidyltransferase putative; Cystathionine beta-synthase, core; Cyclic nucleotide-binding domain; Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; SMART: Cyclic nucleotide-binding domain; Cystathionine beta-synthase, core; SPTR: Putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase; putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase 3231906 11055778 Murru_2928 Muricauda ruestringensis DSM 13258 putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase YP_004789372.1 3229987 R 886377 CDS YP_004789373.1 344204230 11055779 3232132..3233676 1 NC_015945.1 KEGG: coc:Coch_1059 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3233676 11055779 Murru_2929 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789373.1 3232132 D 886377 CDS YP_004789374.1 344204231 11055780 3233698..3234255 1 NC_015945.1 KEGG: gfo:GFO_2811 secreted protein; SPTR: Putative uncharacterized protein; hypothetical protein 3234255 11055780 Murru_2930 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789374.1 3233698 D 886377 CDS YP_004789375.1 344204232 11055781 complement(3234261..3234887) 1 NC_015945.1 KEGG: fjo:Fjoh_1799 hypothetical protein; SPTR: Hypothetical lipoprotein; hypothetical protein 3234887 11055781 Murru_2931 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789375.1 3234261 R 886377 CDS YP_004789376.1 344204233 11055783 3235198..3235581 1 NC_015945.1 KEGG: fbc:FB2170_10364 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3235581 11055783 Murru_2932 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789376.1 3235198 D 886377 CDS YP_004789377.1 344204234 11055784 3235636..3236481 1 NC_015945.1 PFAM: Aminotransferase class IV; COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: fbc:FB2170_10369 4-amino-4-deoxychorismate lyase; PFAM: Aminotransferase, class IV; SPTR: 4-amino-4-deoxychorismate lyase, putative; class IV aminotransferase 3236481 11055784 Murru_2933 Muricauda ruestringensis DSM 13258 class IV aminotransferase YP_004789377.1 3235636 D 886377 CDS YP_004789378.1 344204235 11055785 complement(3236483..3237043) 1 NC_015945.1 PFAM: Uncharacterized ACR, COG1678; COGs: COG1678 Putative transcriptional regulator protein; InterPro IPR003774; KEGG: fbc:FB2170_10374 putative transcriptional regulator; PFAM: Protein of unknown function DUF179; SPTR: Putative transcriptional regulator; hypothetical protein 3237043 11055785 Murru_2934 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789378.1 3236483 R 886377 CDS YP_004789379.1 344204236 11055786 complement(3237165..3237437) 1 NC_015945.1 PFAM: Bacterial DNA-binding protein; COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: fbc:FB2170_10379 DNA-binding protein HU-beta; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; SPTR: Histone family protein DNA-binding protein; histone family protein DNA-binding protein 3237437 11055786 Murru_2935 Muricauda ruestringensis DSM 13258 histone family protein DNA-binding protein YP_004789379.1 3237165 R 886377 CDS YP_004789380.1 344204237 11055787 3237491..3237646 1 NC_015945.1 hypothetical protein 3237646 11055787 Murru_2936 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789380.1 3237491 D 886377 CDS YP_004789381.1 344204238 11055788 complement(3237614..3238576) 1 NC_015945.1 PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase; COGs: COG0223 Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; InterPro IPR005794:IPR002376:IPR005793; KEGG: fbc:FB2170_10384 methionyl-tRNA formyltransferase; PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; PRIAM: Methionyl-tRNA formyltransferase; SPTR: Methionyl-tRNA formyltransferase; TIGRFAM: Methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 3238576 11055788 Murru_2937 Muricauda ruestringensis DSM 13258 methionyl-tRNA formyltransferase YP_004789381.1 3237614 R 886377 CDS YP_004789382.1 344204239 11055789 complement(3238557..3240449) 1 NC_015945.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; COGs: COG0514 Superfamily II DNA helicase; InterPro IPR004589:IPR014001:IPR001650:IPR011545; KEGG: fbc:FB2170_10389 ATP-dependent DNA helicase RecQ; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent DNA helicase recQ; TIGRFAM: DNA helicase, ATP-dependent, RecQ type; RecQ familyATP-dependent DNA helicase 3240449 11055789 Murru_2938 Muricauda ruestringensis DSM 13258 RecQ familyATP-dependent DNA helicase YP_004789382.1 3238557 R 886377 CDS YP_004789383.1 344204240 11055790 complement(3240449..3241012) 1 NC_015945.1 COGs: COG3911 ATPase; KEGG: fbc:FB2170_10394 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3241012 11055790 Murru_2939 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789383.1 3240449 R 886377 CDS YP_004789384.1 344204241 11055791 3241101..3241388 1 NC_015945.1 PFAM: Protein of unknown function (DUF493); KEGG: fbc:FB2170_10399 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3241388 11055791 Murru_2940 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789384.1 3241101 D 886377 CDS YP_004789385.1 344204242 11055792 3241417..3242124 1 NC_015945.1 KEGG: fbc:FB2170_10404 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3242124 11055792 Murru_2941 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789385.1 3241417 D 886377 CDS YP_004789386.1 344204243 11055793 3242140..3243447 1 NC_015945.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; InterPro IPR005750:IPR001986; KEGG: fbc:FB2170_10409 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: Enolpyruvate transferase domain; PRIAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; SPTR: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine1- carboxyvinyltransferase 3243447 11055793 Murru_2942 Muricauda ruestringensis DSM 13258 UDP-N-acetylglucosamine1- carboxyvinyltransferase YP_004789386.1 3242140 D 886377 CDS YP_004789387.1 344204244 11055794 complement(3243448..3243858) 1 NC_015945.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein; COGs: COG3832 conserved hypothetical protein; InterPro IPR013538; KEGG: lbf:LBF_1056 hypothetical protein; PFAM: Activator of Hsp90 ATPase homologue 1-like; SPTR: Activator of Hsp90 ATPase 1 family protein; Activator of Hsp90 ATPase 1 family protein 3243858 11055794 Murru_2943 Muricauda ruestringensis DSM 13258 Activator of Hsp90 ATPase 1 family protein YP_004789387.1 3243448 R 886377 CDS YP_004789388.1 344204245 11055795 complement(3243878..3244372) 1 NC_015945.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein; COGs: COG3832 conserved hypothetical protein; InterPro IPR013538; KEGG: fjo:Fjoh_2147 activator of HSP90 ATPase 1 family protein; PFAM: Activator of Hsp90 ATPase homologue 1-like; SPTR: Activator of Hsp90 ATPase 1 family protein; Activator of Hsp90 ATPase 1 family protein 3244372 11055795 Murru_2944 Muricauda ruestringensis DSM 13258 Activator of Hsp90 ATPase 1 family protein YP_004789388.1 3243878 R 886377 CDS YP_004789389.1 344204246 11055796 complement(3244378..3244704) 1 NC_015945.1 PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: dfe:Dfer_0489 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: ArsR family transcriptional regulator; regulatory protein ArsR 3244704 11055796 Murru_2945 Muricauda ruestringensis DSM 13258 regulatory protein ArsR YP_004789389.1 3244378 R 886377 CDS YP_004789390.1 344204247 11055797 complement(3244855..3245856) 1 NC_015945.1 PFAM: Pirin C-terminal cupin domain; Pirin; COGs: COG1741 Pirin-related protein; InterPro IPR003829:IPR008778; KEGG: mtt:Ftrac_0045 pirin domain protein; PFAM: Pirin, C-terminal; Pirin, N-terminal; SPTR: Putative uncharacterized protein; Pirin domain-containing protein 3245856 11055797 Murru_2946 Muricauda ruestringensis DSM 13258 Pirin domain-containing protein YP_004789390.1 3244855 R 886377 CDS YP_004789391.1 344204248 11055798 complement(3246021..3247448) 1 NC_015945.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168:IPR002933:IPR011650; KEGG: fbc:FB2170_10424 hypothetical protein; PFAM: Peptidase M20; Peptidase M20, dimerisation; SPTR: Putative uncharacterized protein; TIGRFAM: Peptidase M20D, amidohydrolase; amidohydrolase 3247448 11055798 Murru_2947 Muricauda ruestringensis DSM 13258 amidohydrolase YP_004789391.1 3246021 R 886377 CDS YP_004789392.1 344204249 11055799 complement(3247545..3248858) 1 NC_015945.1 PFAM: FAD binding domain of DNA photolyase; DNA photolyase; COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR006050:IPR005101; KEGG: fbc:FB2170_10429 deoxyribodipyrimidine photolyase-class I; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; PRIAM: Deoxyribodipyrimidine photo-lyase; SPTR: Deoxyribodipyrimidine photolyase-class I; deoxyribodipyrimidine photo-lyase 3248858 11055799 Murru_2948 Muricauda ruestringensis DSM 13258 deoxyribodipyrimidine photo-lyase YP_004789392.1 3247545 R 886377 CDS YP_004789393.1 344204250 11055800 complement(3248858..3249550) 1 NC_015945.1 PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: zpr:ZPR_2314 short-chain dehydrogenase/reductase family protein; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short chain dehydrogenase; 3-oxoacyl-ACP reductase 3249550 11055800 Murru_2949 Muricauda ruestringensis DSM 13258 3-oxoacyl-ACP reductase YP_004789393.1 3248858 R 886377 CDS YP_004789394.1 344204251 11055801 complement(3249552..3250049) 1 NC_015945.1 KEGG: gfo:GFO_1820 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3250049 11055801 Murru_2950 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789394.1 3249552 R 886377 CDS YP_004789395.1 344204252 11055802 3250225..3251079 1 NC_015945.1 PFAM: Protein of unknown function (DUF2911); KEGG: rbi:RB2501_13729 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3251079 11055802 Murru_2951 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789395.1 3250225 D 886377 CDS YP_004789396.1 344204253 11055803 complement(3251134..3252843) 1 NC_015945.1 PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR019900:IPR001734; KEGG: rbi:RB2501_13734 sodium iodide symporter; PFAM: Sodium/solute symporter; SPTR: Sodium iodide symporter; TIGRFAM: Sodium/solute symporter, subgroup; SSS sodium solute transporter superfamily protein 3252843 11055803 Murru_2952 Muricauda ruestringensis DSM 13258 SSS sodium solute transporter superfamily protein YP_004789396.1 3251134 R 886377 CDS YP_004789397.1 344204254 11055804 complement(3252852..3252968) 1 NC_015945.1 hypothetical protein 3252968 11055804 Murru_2953 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789397.1 3252852 R 886377 CDS YP_004789398.1 344204255 11055805 complement(3252955..3255486) 1 NC_015945.1 PFAM: GlcNAc-PI de-N-acetylase; InterPro IPR003737; KEGG: fbc:FB2170_10489 hypothetical protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; SPTR: Putative uncharacterized protein; LmbE family protein 3255486 11055805 Murru_2954 Muricauda ruestringensis DSM 13258 LmbE family protein YP_004789398.1 3252955 R 886377 CDS YP_004789399.1 344204256 11055806 complement(3255579..3256535) 1 NC_015945.1 KEGG: fbc:FB2170_10499 Maf-like protein; SPTR: Maf-like protein; Maf-like protein 3256535 11055806 Murru_2955 Muricauda ruestringensis DSM 13258 Maf-like protein YP_004789399.1 3255579 R 886377 CDS YP_004789400.1 344204257 11055807 complement(3256571..3257203) 1 NC_015945.1 PFAM: Maf-like protein; TIGRFAM: MAF protein; COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; HAMAP: Maf-like protein; InterPro IPR003697; KEGG: fjo:Fjoh_2955 Maf-like protein; PFAM: Maf-like protein; SPTR: Maf-like protein KAOT1_09024; TIGRFAM: Maf-like protein; Septum formation protein Maf 3257203 11055807 Murru_2956 Muricauda ruestringensis DSM 13258 Septum formation protein Maf YP_004789400.1 3256571 R 886377 CDS YP_004789401.1 344204258 11055808 complement(3257163..3257690) 1 NC_015945.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR010023:IPR006549; KEGG: rbi:RB2501_13764 putative hydrolase; SPTR: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 3257690 11055808 Murru_2957 Muricauda ruestringensis DSM 13258 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_004789401.1 3257163 R 886377 CDS YP_004789402.1 344204259 11055809 complement(3257674..3258435) 1 NC_015945.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; Domain of unknown function (DUF2520); InterPro IPR018931; KEGG: fps:FP1419 hypothetical protein; PFAM: Domain of unknown function DUF2520; SPTR: Putative uncharacterized protein; hypothetical protein 3258435 11055809 Murru_2958 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789402.1 3257674 R 886377 CDS YP_004789403.1 344204260 11055810 3258569..3261736 1 NC_015945.1 PFAM: Cytochrome C assembly protein; ResB-like family; TIGRFAM: cytochrome c-type biogenesis protein CcsB; COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541; KEGG: fbc:FB2170_10536 cytochrome c assembly protein; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c assembly protein; cytochrome c assembly protein 3261736 11055810 Murru_2959 Muricauda ruestringensis DSM 13258 cytochrome c assembly protein YP_004789403.1 3258569 D 886377 CDS YP_004789404.1 344204261 11055811 complement(3261738..3263033) 1 NC_015945.1 PFAM: Zinc carboxypeptidase; InterPro IPR000834; KEGG: rbi:RB2501_13074 hypothetical protein; PFAM: Peptidase M14, carboxypeptidase A; SMART: Peptidase M14, carboxypeptidase A; SPTR: Putative uncharacterized protein; peptidase M14 carboxypeptidase A 3263033 11055811 Murru_2960 Muricauda ruestringensis DSM 13258 peptidase M14 carboxypeptidase A YP_004789404.1 3261738 R 886377 CDS YP_004789405.1 344204262 11055812 3263266..3264675 1 NC_015945.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: fbc:FB2170_10576 multi antimicrobial extrusion family drug/sodium antiporter; PFAM: Multi antimicrobial extrusion protein; SPTR: Multi antimicrobial extrusion family drug/sodium antiporter; TIGRFAM: Multi antimicrobial extrusion protein; MATE efflux family protein 3264675 11055812 Murru_2961 Muricauda ruestringensis DSM 13258 MATE efflux family protein YP_004789405.1 3263266 D 886377 CDS YP_004789406.1 344204263 11055813 3264711..3265904 1 NC_015945.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: fbc:FB2170_10581 cystathionine beta-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cystathionine gamma-lyase; SPTR: Cystathionine beta-lyase; cystathionine gamma-synthase 3265904 11055813 Murru_2962 Muricauda ruestringensis DSM 13258 cystathionine gamma-synthase YP_004789406.1 3264711 D 886377 CDS YP_004789407.1 344204264 11055814 3265911..3266633 1 NC_015945.1 PFAM: GlcNAc-PI de-N-acetylase; TIGRFAM: bacillithiol biosynthesis deacetylase BshB1; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: fbc:FB2170_10586 hypothetical protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; SPTR: Putative uncharacterized protein; LmbE family protein 3266633 11055814 Murru_2963 Muricauda ruestringensis DSM 13258 LmbE family protein YP_004789407.1 3265911 D 886377 CDS YP_004789408.1 344204265 11055815 complement(3266634..3268724) 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR019734:IPR003594:IPR001440; KEGG: fbc:FB2170_10591 sensor histidine kinase/response regulator; PFAM: ATPase-like, ATP-binding domain; Tetratricopeptide TPR-1; SMART: ATPase-like, ATP-binding domain; Tetratricopeptide repeat; SPTR: Sensor histidine kinase/response regulator; multi-sensor signal transduction histidine kinase 3268724 11055815 Murru_2964 Muricauda ruestringensis DSM 13258 multi-sensor signal transduction histidine kinase YP_004789408.1 3266634 R 886377 CDS YP_004789409.1 344204266 11055817 complement(3269175..3270731) 1 NC_015945.1 PFAM: PA domain; Peptidase family M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: fbc:FB2170_10596 putative aminopeptidase; PFAM: Peptidase M28; SPTR: Putative aminopeptidase; peptidase M28 3270731 11055817 Murru_2965 Muricauda ruestringensis DSM 13258 peptidase M28 YP_004789409.1 3269175 R 886377 CDS YP_004789410.1 344204267 11055818 3270865..3272121 1 NC_015945.1 PFAM: FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: fbc:FB2170_10621 D-amino acid dehydrogenase; PFAM: FAD dependent oxidoreductase; PRIAM: D-amino-acid dehydrogenase; SPTR: D-amino acid dehydrogenase; D-amino-acid dehydrogenase 3272121 11055818 Murru_2966 Muricauda ruestringensis DSM 13258 D-amino-acid dehydrogenase YP_004789410.1 3270865 D 886377 CDS YP_004789411.1 344204268 11055819 3272199..3273125 1 NC_015945.1 KEGG: fbc:FB2170_12931 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3273125 11055819 Murru_2967 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789411.1 3272199 D 886377 CDS YP_004789412.1 344204269 11055820 complement(3273129..3273773) 1 NC_015945.1 PFAM: Phospholipase/Carboxylesterase; KEGG: fbc:FB2170_12921 esterase/lipase; SPTR: Esterase/lipase, putative; esterase/lipase 3273773 11055820 Murru_2968 Muricauda ruestringensis DSM 13258 esterase/lipase YP_004789412.1 3273129 R 886377 CDS YP_004789413.1 344204270 11055821 3273836..3274258 1 NC_015945.1 PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR003736:IPR006683; KEGG: fbc:FB2170_12916 hypothetical protein; PFAM: Thioesterase superfamily; SPTR: Putative uncharacterized protein; TIGRFAM: Phenylacetic acid degradation-related protein; phenylacetic acid degradation-like protein 3274258 11055821 Murru_2969 Muricauda ruestringensis DSM 13258 phenylacetic acid degradation-like protein YP_004789413.1 3273836 D 886377 CDS YP_004789414.1 344204271 11055822 3274239..3275300 1 NC_015945.1 PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases; COGs: COG1169 Isochorismate synthase; InterPro IPR004561:IPR015890; KEGG: fbc:FB2170_12911 isochorismate synthase EntC; PFAM: Chorismate binding, C-terminal; SPTR: Isochorismate synthase entC; TIGRFAM: Isochorismate synthase; isochorismate synthase 3275300 11055822 Murru_2970 Muricauda ruestringensis DSM 13258 isochorismate synthase YP_004789414.1 3274239 D 886377 CDS YP_004789415.1 344204272 11055823 3275355..3277097 1 NC_015945.1 PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase; COGs: COG1165 2-succinyl-6-hydroxy-2 4-cyclohexadiene-1-carboxylate synthase; HAMAP: Menaquinone biosynthesis protein MenD; InterPro IPR004433; KEGG: fbc:FB2170_12906 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; PRIAM:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohex ene-1-carboxylic-acidsynthase; SPTR:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexe ne-1-carboxylatesynthase; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 3277097 11055823 Murru_2971 Muricauda ruestringensis DSM 13258 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase YP_004789415.1 3275355 D 886377 CDS YP_004789416.1 344204273 11055824 3277136..3277477 1 NC_015945.1 PFAM: Protein of unknown function (DUF2853); KEGG: fbc:FB2170_12901 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3277477 11055824 Murru_2972 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789416.1 3277136 D 886377 CDS YP_004789417.1 344204274 11055825 3277658..3278488 1 NC_015945.1 COGs: COG2996 conserved hypothetical protein; KEGG: rbi:RB2501_15729 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3278488 11055825 Murru_2973 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789417.1 3277658 D 886377 CDS YP_004789418.1 344204275 11055826 3278634..3279233 1 NC_015945.1 PFAM: Sporulation related domain; InterPro IPR007730; KEGG: fbc:FB2170_12891 hypothetical protein; PFAM: Sporulation-related domain; SPTR: Putative uncharacterized protein; sporulation domain-containing protein 3279233 11055826 Murru_2974 Muricauda ruestringensis DSM 13258 sporulation domain-containing protein YP_004789418.1 3278634 D 886377 CDS YP_004789419.1 344204276 11055827 3279236..3280144 1 NC_015945.1 PFAM: UbiA prenyltransferase family; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; COGs: COG1575 1 4-dihydroxy-2-naphthoate octaprenyltransferase; InterPro IPR004657:IPR000537; KEGG: fbc:FB2170_12886 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; SPTR: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; 1,4-dihydroxy-2-naphthoateoctaprenyltransferase 3280144 11055827 Murru_2975 Muricauda ruestringensis DSM 13258 1,4-dihydroxy-2-naphthoateoctaprenyltransferase YP_004789419.1 3279236 D 886377 CDS YP_004789420.1 344204277 11055828 3280178..3280927 1 NC_015945.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: fbc:FB2170_12881 response regulator receiver signal transduction histidine kinase; PFAM: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SMART: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SPTR: Response regulator receiver signal transduction histidine kinase; LytTR family two component transcriptional regulator 3280927 11055828 Murru_2976 Muricauda ruestringensis DSM 13258 LytTR family two component transcriptional regulator YP_004789420.1 3280178 D 886377 CDS YP_004789421.1 344204278 11055829 3281465..3283426 1 NC_015945.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG3920 Signal transduction histidine kinase; InterPro IPR003594:IPR011495; KEGG: fbc:FB2170_12866 two-component hybrid sensor and regulator; PFAM: Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Two-component hybrid sensor and regulator; signal transduction histidine kinase 3283426 11055829 Murru_2977 Muricauda ruestringensis DSM 13258 signal transduction histidine kinase YP_004789421.1 3281465 D 886377 CDS YP_004789422.1 344204279 11055830 3283482..3284534 1 NC_015945.1 PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; TIGRFAM: o-succinylbenzoate synthase; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR010196:IPR013342; KEGG: zpr:ZPR_3063 O-succinylbenzoate synthase; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: O-succinylbenzoate synthase; TIGRFAM: O-succinylbenzoic acid (OSB) synthetase; o-succinylbenzoic acid (OSB) synthetase 3284534 11055830 Murru_2978 Muricauda ruestringensis DSM 13258 o-succinylbenzoic acid (OSB) synthetase YP_004789422.1 3283482 D 886377 CDS YP_004789423.1 344204280 11055831 3284525..3285487 1 NC_015945.1 PFAM: CAAX amino terminal protease family; InterPro IPR003675; KEGG: fbc:FB2170_12846 hypothetical protein; PFAM: Abortive infection protein; SPTR: Putative uncharacterized protein; abortive infection protein 3285487 11055831 Murru_2979 Muricauda ruestringensis DSM 13258 abortive infection protein YP_004789423.1 3284525 D 886377 CDS YP_004789424.1 344204281 11055832 3285465..3286538 1 NC_015945.1 PFAM: AMP-binding enzyme; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: fbc:FB2170_12841 O-succinylbenzoic acid-CoA ligase; PFAM: AMP-dependent synthetase/ligase; SPTR: O-succinylbenzoic acid-CoA ligase; AMP-dependent synthetase and ligase 3286538 11055832 Murru_2980 Muricauda ruestringensis DSM 13258 AMP-dependent synthetase and ligase YP_004789424.1 3285465 D 886377 CDS YP_004789425.1 344204282 11055833 3286737..3288083 1 NC_015945.1 PFAM: Metallopeptidase family M24; KEGG: fbc:FB2170_12836 Xaa-Pro aminopeptidase family enzyme; SPTR: Xaa-Pro aminopeptidase family enzyme; Xaa-Pro aminopeptidase family protein 3288083 11055833 Murru_2981 Muricauda ruestringensis DSM 13258 Xaa-Pro aminopeptidase family protein YP_004789425.1 3286737 D 886377 CDS YP_004789426.1 344204283 11055834 complement(3288088..3289716) 1 NC_015945.1 PFAM: Carboxyl transferase domain; COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR000022; KEGG: fbc:FB2170_12821 propionyl-CoA carboxylase subunit beta; PFAM: Carboxyl transferase; PRIAM: Methylcrotonoyl-CoA carboxylase; SPTR: Propionyl-CoA carboxylase, beta subunit, putative; methylcrotonoyl-CoA carboxylase 3289716 11055834 Murru_2982 Muricauda ruestringensis DSM 13258 methylcrotonoyl-CoA carboxylase YP_004789426.1 3288088 R 886377 CDS YP_004789427.1 344204284 11055835 3289779..3290762 1 NC_015945.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: fbc:FB2170_12816 putative dehydrogenase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; PRIAM: Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase; SPTR: Predicted dehydrogenase; trans-1,2-dihydrobenzene-1,2-diol dehydrogenase 3290762 11055835 Murru_2983 Muricauda ruestringensis DSM 13258 trans-1,2-dihydrobenzene-1,2-diol dehydrogenase YP_004789427.1 3289779 D 886377 CDS YP_004789428.1 344204285 11055836 3290835..3291011 1 NC_015945.1 KEGG: cat:CA2559_08321 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3291011 11055836 Murru_2984 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789428.1 3290835 D 886377 CDS YP_004789429.1 344204286 11055837 3291045..3292736 1 NC_015945.1 PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_12806 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative ATP-binding component of ABC transporter; ABC transporter-like protein 3292736 11055837 Murru_2985 Muricauda ruestringensis DSM 13258 ABC transporter-like protein YP_004789429.1 3291045 D 886377 CDS YP_004789430.1 344204287 11055838 complement(3292745..3293434) 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 3293434 11055838 Murru_2986 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789430.1 3292745 R 886377 CDS YP_004789431.1 344204288 11055839 complement(3293500..3294297) 1 NC_015945.1 COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: fbc:FB2170_12801 putative metal-dependent hydrolase; SPTR: Putative metal-dependent hydrolase; putative metal-dependent hydrolase 3294297 11055839 Murru_2987 Muricauda ruestringensis DSM 13258 putative metal-dependent hydrolase YP_004789431.1 3293500 R 886377 CDS YP_004789432.1 344204289 11055840 3294464..3295354 1 NC_015945.1 KEGG: fbc:FB2170_12791 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3295354 11055840 Murru_2988 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789432.1 3294464 D 886377 CDS YP_004789433.1 344204290 11055841 complement(3295432..3296829) 1 NC_015945.1 PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: fumarate hydratase, class II; COGs: COG0114 Fumarase; HAMAP: Fumarate hydratase, class II; InterPro IPR005677:IPR022761:IPR018951; KEGG: fbc:FB2170_12786 fumarate hydratase; PFAM: Lyase 1, N-terminal; Fumarase C, C-terminal; PRIAM: Fumarate hydratase; SPTR: Fumarate hydratase; TIGRFAM: Fumarate hydratase, class II; class II fumarate hydratase 3296829 11055841 Murru_2989 Muricauda ruestringensis DSM 13258 class II fumarate hydratase YP_004789433.1 3295432 R 886377 CDS YP_004789434.1 344204291 11055842 3296968..3297141 1 NC_015945.1 KEGG: fbc:FB2170_12781 fumarate hydratase; SPTR: Fumarate hydratase; fumarate hydratase 3297141 11055842 Murru_2990 Muricauda ruestringensis DSM 13258 fumarate hydratase YP_004789434.1 3296968 D 886377 CDS YP_004789435.1 344204292 11055843 complement(3297329..3299812) 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: rbi:RB2501_15614 TonB-dependent receptor domain-containing protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor domain protein; TonB-dependent receptor 3299812 11055843 Murru_2991 Muricauda ruestringensis DSM 13258 TonB-dependent receptor YP_004789435.1 3297329 R 886377 CDS YP_004789436.1 344204293 11055844 complement(3299914..3300408) 1 NC_015945.1 KEGG: fbc:FB2170_12771 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3300408 11055844 Murru_2992 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789436.1 3299914 R 886377 CDS YP_004789437.1 344204294 11055845 complement(3300477..3300818) 1 NC_015945.1 PFAM: ArsC family; TIGRFAM: arsenate reductase (glutaredoxin); COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006659:IPR006660; KEGG: fbc:FB2170_12766 arsenate reductase; PFAM: Arsenate reductase-like; SPTR: Arsenate reductase; TIGRFAM: Arsenate reductase; arsenate reductase 3300818 11055845 Murru_2993 Muricauda ruestringensis DSM 13258 arsenate reductase YP_004789437.1 3300477 R 886377 CDS YP_004789438.1 344204295 11055846 complement(join(3300829..3301866,3301868..3301930)) 1 NC_015945.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; peptide chain release factor 2 3301930 11055846 Murru_2994 Muricauda ruestringensis DSM 13258 peptide chain release factor 2 YP_004789438.1 3300829 R 886377 CDS YP_004789439.1 344204296 11055847 3302128..3302349 1 NC_015945.1 hypothetical protein 3302349 11055847 Murru_2995 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789439.1 3302128 D 886377 CDS YP_004789440.1 344204297 11055848 3302386..3304788 1 NC_015945.1 KEGG: fbc:FB2170_12751 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3304788 11055848 Murru_2996 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789440.1 3302386 D 886377 CDS YP_004789441.1 344204298 11055849 3304797..3305822 1 NC_015945.1 PFAM: Beta-eliminating lyase; COGs: COG2008 Threonine aldolase; InterPro IPR001597; KEGG: fbc:FB2170_12746 L-allo-threonine aldolase; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase; PRIAM: Threonine aldolase; SPTR: L-allo-threonine aldolase; threonine aldolase 3305822 11055849 Murru_2997 Muricauda ruestringensis DSM 13258 threonine aldolase YP_004789441.1 3304797 D 886377 CDS YP_004789442.1 344204299 11055850 3306079..3306375 1 NC_015945.1 PFAM: GIY-YIG catalytic domain; COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: fjo:Fjoh_0254 excinuclease ABC subunit C; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: Predicted endonuclease containing a URI domain; excinuclease ABC C subunit domain-containing protein 3306375 11055850 Murru_2998 Muricauda ruestringensis DSM 13258 excinuclease ABC C subunit domain-containing protein YP_004789442.1 3306079 D 886377 CDS YP_004789443.1 344204300 11055851 complement(3306586..3306912) 1 NC_015945.1 PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family; HAMAP: Uncharacterised protein family UPF0133; InterPro IPR004401; KEGG: gfo:GFO_1796 hypothetical protein; PFAM: Uncharacterised protein family UPF0133; SPTR: UPF0133 protein GFO_1796; TIGRFAM: Uncharacterised protein family UPF0133; hypothetical protein 3306912 11055851 Murru_2999 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789443.1 3306586 R 886377 CDS YP_004789444.1 344204301 11055852 3307016..3309154 1 NC_015945.1 PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family; COGs: COG1770 Protease II; InterPro IPR004106:IPR001375; KEGG: fbc:FB2170_12726 hypothetical protein; PFAM: Peptidase S9A, oligopeptidase, N-terminal beta-propeller; Peptidase S9, prolyl oligopeptidase, catalytic domain; PRIAM: Oligopeptidase B; SPTR: Putative uncharacterized protein; oligopeptidase B 3309154 11055852 Murru_3000 Muricauda ruestringensis DSM 13258 oligopeptidase B YP_004789444.1 3307016 D 886377 CDS YP_004789445.1 344204302 11055853 3309225..3310265 1 NC_015945.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cystathionine beta-synthase; COGs: COG0031 Cysteine synthase; InterPro IPR001926; KEGG: fbc:FB2170_12721 cystathionine beta-synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Cysteine synthase; SPTR: Cystathionine beta-synthase; cysteine synthase 3310265 11055853 Murru_3001 Muricauda ruestringensis DSM 13258 cysteine synthase YP_004789445.1 3309225 D 886377 CDS YP_004789446.1 344204303 11055854 3310390..3311649 1 NC_015945.1 PFAM: Aminotransferase class I and II; COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839; KEGG: fbc:FB2170_12716 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/classII; PRIAM: 8-amino-7-oxononanoate synthase; SPTR: 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase 3311649 11055854 Murru_3002 Muricauda ruestringensis DSM 13258 8-amino-7-oxononanoate synthase YP_004789446.1 3310390 D 886377 CDS YP_004789447.1 344204304 11055855 complement(3311738..3312688) 1 NC_015945.1 PFAM: Carbon-nitrogen hydrolase; COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: fbc:FB2170_01487 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 3312688 11055855 Murru_3003 Muricauda ruestringensis DSM 13258 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004789447.1 3311738 R 886377 CDS YP_004789448.1 344204305 11055856 complement(3312776..3313573) 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: fjo:Fjoh_1287 helix-turn-helix domain-containing protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Helix-turn-helix domain protein; AraC family transcriptional regulator 3313573 11055856 Murru_3004 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004789448.1 3312776 R 886377 CDS YP_004789449.1 344204306 11055857 complement(3313830..3314516) 1 NC_015945.1 KEGG: mtt:Ftrac_1318 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3314516 11055857 Murru_3005 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789449.1 3313830 R 886377 CDS YP_004789450.1 344204307 11055858 complement(3315073..3316050) 1 NC_015945.1 PFAM: Integrase core domain; COGs: COG2801 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: lby:Lbys_0529 integrase catalytic region; PFAM: Integrase, catalytic core; SPTR: Helix-turn-helix, Fis-type protein; integrase catalytic subunit 3316050 11055858 Murru_3006 Muricauda ruestringensis DSM 13258 integrase catalytic subunit YP_004789450.1 3315073 R 886377 CDS YP_004789451.1 344204308 11055859 complement(3316065..3316412) 1 NC_015945.1 PFAM: Transposase; InterPro IPR002514; KEGG: mch:Mchl_5506 transposase IS3/IS911 family protein; PFAM: Transposase IS3/IS911family; SPTR: Transposase subfamily protein; transposase IS3/IS911 family protein 3316412 11055859 Murru_3007 Muricauda ruestringensis DSM 13258 transposase IS3/IS911 family protein YP_004789451.1 3316065 R 886377 CDS YP_004789452.1 344204309 11055860 complement(3316521..3318773) 1 NC_015945.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR003439; KEGG: cpi:Cpin_3040 ABC transporter related; PFAM: ABC transporter-like; SPTR: ABC transporter related; ABC transporter-like protein 3318773 11055860 Murru_3008 Muricauda ruestringensis DSM 13258 ABC transporter-like protein YP_004789452.1 3316521 R 886377 CDS YP_004789453.1 344204310 11055861 complement(3318964..3319551) 1 NC_015945.1 hypothetical protein 3319551 11055861 Murru_3009 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789453.1 3318964 R 886377 CDS YP_004789454.1 344204311 11055862 complement(3319779..3320135) 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 3320135 11055862 Murru_3010 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789454.1 3319779 R 886377 CDS YP_004789455.1 344204312 11055863 complement(3320353..3320946) 1 NC_015945.1 TIGRFAM: acyl carrier protein; InterPro IPR006163; KEGG: rba:RB2934 acyl carrier protein; PFAM: Phosphopantetheine-binding; SPTR: Putative uncharacterized protein; phosphopantetheine-binding protein 3320946 11055863 Murru_3011 Muricauda ruestringensis DSM 13258 phosphopantetheine-binding protein YP_004789455.1 3320353 R 886377 CDS YP_004789456.1 344204313 11055864 complement(3321099..3322214) 1 NC_015945.1 PFAM: Phage integrase family; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: cat:CA2559_00230 putative tyrosine recombinase; PFAM: Integrase, catalytic core, phage; SPTR: Tyrosine type site-specific recombinase; integrase family protein 3322214 11055864 Murru_3012 Muricauda ruestringensis DSM 13258 integrase family protein YP_004789456.1 3321099 R 886377 CDS YP_004789457.1 344204314 11055866 complement(3322625..3323407) 1 NC_015945.1 PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: mmr:Mmar10_1233 methyltransferase type 11; PFAM: Fatty acid hydroxylase; SPTR: Methyltransferase type 11; fatty acid hydroxylase 3323407 11055866 Murru_3014 Muricauda ruestringensis DSM 13258 fatty acid hydroxylase YP_004789457.1 3322625 R 886377 CDS YP_004789458.1 344204315 11055867 complement(3323527..3324396) 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: fbc:FB2170_12971 putative transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: AraC family transcriptional regulator; AraC family transcriptional regulator 3324396 11055867 Murru_3015 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004789458.1 3323527 R 886377 CDS YP_004789459.1 344204316 11055868 complement(3324583..3325701) 1 NC_015945.1 KEGG: fbc:FB2170_12711 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3325701 11055868 Murru_3016 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789459.1 3324583 R 886377 CDS YP_004789460.1 344204317 11055869 complement(3325786..3326748) 1 NC_015945.1 KEGG: rbi:RB2501_15534 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3326748 11055869 Murru_3017 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789460.1 3325786 R 886377 CDS YP_004789461.1 344204318 11055870 3326836..3327096 1 NC_015945.1 KEGG: fbc:FB2170_12701 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3327096 11055870 Murru_3018 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789461.1 3326836 D 886377 CDS YP_004789462.1 344204319 11055871 3327121..3329553 1 NC_015945.1 PFAM: Bacterial membrane protein YfhO; InterPro IPR018580; KEGG: fbc:FB2170_12696 hypothetical protein; PFAM: Uncharacterised protein family YfhO; SPTR: Putative uncharacterized protein; hypothetical protein 3329553 11055871 Murru_3019 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789462.1 3327121 D 886377 CDS YP_004789463.1 344204320 11055872 3329553..3330821 1 NC_015945.1 KEGG: fbc:FB2170_12691 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3330821 11055872 Murru_3020 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789463.1 3329553 D 886377 CDS YP_004789464.1 344204321 11055873 3330821..3332281 1 NC_015945.1 PFAM: Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: fbc:FB2170_12686 hypothetical protein; PFAM: Polysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; polysaccharide biosynthesis protein 3332281 11055873 Murru_3021 Muricauda ruestringensis DSM 13258 polysaccharide biosynthesis protein YP_004789464.1 3330821 D 886377 CDS YP_004789465.1 344204322 11055874 complement(3332332..3333546) 1 NC_015945.1 KEGG: rbi:RB2501_15509 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3333546 11055874 Murru_3022 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789465.1 3332332 R 886377 CDS YP_004789466.1 344204323 11055875 complement(3333983..3335920) 1 NC_015945.1 PFAM: WD40-like Beta Propeller Repeat; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR006665; KEGG: cat:CA2559_13643 OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: Outer membrane protein, peptidoglycan-associated lipoprotein; OmpA/MotB domain-containing protein 3335920 11055875 Murru_3023 Muricauda ruestringensis DSM 13258 OmpA/MotB domain-containing protein YP_004789466.1 3333983 R 886377 CDS YP_004789467.1 344204324 11055876 complement(3335931..3336887) 1 NC_015945.1 PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: cat:CA2559_13648 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein 3336887 11055876 Murru_3024 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789467.1 3335931 R 886377 CDS YP_004789468.1 344204325 11055877 complement(3336935..3340216) 1 NC_015945.1 InterPro IPR001434; KEGG: cat:CA2559_00005 transcriptional regulator, AraC family with parallel beta-helix repeat; SPTR: Transcriptional regulator, AraC family with Parallel beta-helix repeat; TIGRFAM: Domain of unknown function DUF11; hypothetical protein 3340216 11055877 Murru_3025 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789468.1 3336935 R 886377 CDS YP_004789469.1 344204326 11055878 complement(3340651..3342585) 1 NC_015945.1 PFAM: WD40-like Beta Propeller Repeat; Cna protein B-type domain; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR013105:IPR011659:IPR008454:IPR006665; KEGG: cat:CA2559_13643 OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Collagen-binding surface protein Cna-like, B-type domain; Tetratricopeptide TPR2; WD40-like Beta Propeller; SPTR: OmpA family protein; OmpA/MotB domain-containing protein 3342585 11055878 Murru_3026 Muricauda ruestringensis DSM 13258 OmpA/MotB domain-containing protein YP_004789469.1 3340651 R 886377 CDS YP_004789470.1 344204327 11055879 complement(3342598..3343572) 1 NC_015945.1 PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: cat:CA2559_13648 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein 3343572 11055879 Murru_3027 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789470.1 3342598 R 886377 CDS YP_004789471.1 344204328 11055880 complement(3343596..3348917) 1 NC_015945.1 TIGRFAM: conserved repeat domain; InterPro IPR001434:IPR010221; KEGG: cat:CA2559_00005 transcriptional regulator, AraC family with parallel beta-helix repeat; SPTR: Transcriptional regulator, AraC family with Parallel beta-helix repeat; TIGRFAM: Domain of unknown function DUF11; VCBS repeat; hypothetical protein 3348917 11055880 Murru_3028 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789471.1 3343596 R 886377 CDS YP_004789472.1 344204329 11055881 complement(3349438..3352215) 1 NC_015945.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR004602:IPR003439; KEGG: fbc:FB2170_12676 excinuclease ABC subunit A; PFAM: ABC transporter-like; SPTR: Excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit; excinuclease ABC subunit A 3352215 11055881 Murru_3029 Muricauda ruestringensis DSM 13258 excinuclease ABC subunit A YP_004789472.1 3349438 R 886377 CDS YP_004789473.1 344204330 11055882 3352467..3353051 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: fbc:FB2170_12661 ECF family RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma-70 factor, ECF subfamily protein; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 3353051 11055882 Murru_3030 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004789473.1 3352467 D 886377 CDS YP_004789474.1 344204331 11055883 complement(3353305..3353967) 1 NC_015945.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; TIGRFAM: endonuclease III; COGs: COG0177 EndoIII-related endonuclease; InterPro IPR003265; KEGG: fbc:FB2170_12656 putative endonuclease; PFAM: HhH-GPD domain; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD domain; SPTR: Putative endonuclease; DNA-(apurinic or apyrimidinic site) lyase 3353967 11055883 Murru_3031 Muricauda ruestringensis DSM 13258 DNA-(apurinic or apyrimidinic site) lyase YP_004789474.1 3353305 R 886377 CDS YP_004789475.1 344204332 11055884 3354029..3354475 1 NC_015945.1 PFAM: AhpC/TSA family; COGs: COG1225 Peroxiredoxin; InterPro IPR000866; KEGG: fbc:FB2170_12651 bacterioferritin comigratory protein; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; PRIAM: Peroxiredoxin; SPTR: Bacterioferritin comigratory protein; peroxiredoxin 3354475 11055884 Murru_3032 Muricauda ruestringensis DSM 13258 peroxiredoxin YP_004789475.1 3354029 D 886377 CDS YP_004789476.1 344204333 11055885 complement(3354707..3356161) 1 NC_015945.1 KEGG: rbi:RB2501_15469 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3356161 11055885 Murru_3033 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789476.1 3354707 R 886377 CDS YP_004789477.1 344204334 11055886 3356239..3357015 1 NC_015945.1 PFAM: Metallo-beta-lactamase superfamily; COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; InterPro IPR001279; KEGG: fbc:FB2170_12641 putative hydrolase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: Putative hydrolase; beta-lactamase domain-containing protein 3357015 11055886 Murru_3034 Muricauda ruestringensis DSM 13258 beta-lactamase domain-containing protein YP_004789477.1 3356239 D 886377 CDS YP_004789478.1 344204335 11055887 3357333..3357824 1 NC_015945.1 KEGG: fbc:FB2170_12636 putative hydrolase; SPTR: Putative hydrolase; putative hydrolase 3357824 11055887 Murru_3035 Muricauda ruestringensis DSM 13258 putative hydrolase YP_004789478.1 3357333 D 886377 CDS YP_004789479.1 344204336 11055888 complement(3358240..3358899) 1 NC_015945.1 PFAM: Phospholipase/Carboxylesterase; COGs: COG0400 esterase; InterPro IPR003140; KEGG: rbi:RB2501_15454 hypothetical protein; PFAM: Phospholipase/carboxylesterase; SPTR: Putative uncharacterized protein; phospholipase/carboxylesterase 3358899 11055888 Murru_3036 Muricauda ruestringensis DSM 13258 phospholipase/carboxylesterase YP_004789479.1 3358240 R 886377 CDS YP_004789480.1 344204337 11055889 complement(3358909..3359232) 1 NC_015945.1 PFAM: Chloroplast import component protein (Tic20); KEGG: fbc:FB2170_12626 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3359232 11055889 Murru_3037 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789480.1 3358909 R 886377 CDS YP_004789481.1 344204338 11055890 complement(3359232..3360485) 1 NC_015945.1 TIGRFAM: dihydroorotase, multifunctional complex type; COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR006680; KEGG: fbc:FB2170_12621 dihydroorotase; PFAM: Amidohydrolase 1; SPTR: Dihydroorotase; amidohydrolase 3360485 11055890 Murru_3038 Muricauda ruestringensis DSM 13258 amidohydrolase YP_004789481.1 3359232 R 886377 CDS YP_004789482.1 344204339 11055891 complement(3360482..3362434) 1 NC_015945.1 PFAM: Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain; InterPro IPR011933; KEGG: fbc:FB2170_12616 hypothetical protein; PFAM: Double transmembrane domain; SPTR: Putative uncharacterized protein; TIGRFAM: Double transmembrane domain; double-transmembrane region domain-containing protein 3362434 11055891 Murru_3039 Muricauda ruestringensis DSM 13258 double-transmembrane region domain-containing protein YP_004789482.1 3360482 R 886377 CDS YP_004789483.1 344204340 11055892 complement(3362618..3363625) 1 NC_015945.1 PFAM: Glycosyl transferase family 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: fbc:FB2170_12611 group 2 family glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 2 family protein; family 2 glycosyl transferase 3363625 11055892 Murru_3040 Muricauda ruestringensis DSM 13258 family 2 glycosyl transferase YP_004789483.1 3362618 R 886377 CDS YP_004789484.1 344204341 11055893 complement(3363658..3364053) 1 NC_015945.1 KEGG: fbc:FB2170_15568 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3364053 11055893 Murru_3041 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789484.1 3363658 R 886377 CDS YP_004789485.1 344204342 11055894 complement(3364055..3364750) 1 NC_015945.1 PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: rbi:RB2501_15429 putative acylhydrolase; PFAM: Lipase, GDSL; SPTR: Putative acylhydrolase; G-D-S-L family lipolytic protein 3364750 11055894 Murru_3042 Muricauda ruestringensis DSM 13258 G-D-S-L family lipolytic protein YP_004789485.1 3364055 R 886377 CDS YP_004789486.1 344204343 11055895 complement(3364783..3365052) 1 NC_015945.1 KEGG: rbi:RB2501_12252 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3365052 11055895 Murru_3043 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789486.1 3364783 R 886377 CDS YP_004789487.1 344204344 11055896 complement(3365193..3366677) 1 NC_015945.1 PFAM: Serine carboxypeptidase; COGs: COG2939 Carboxypeptidase C (cathepsin A); InterPro IPR001563; KEGG: rbi:RB2501_15419 serine carboxypeptidase; PFAM: Peptidase S10, serine carboxypeptidase; SPTR: Serine carboxypeptidase; peptidase S10 serine carboxypeptidase 3366677 11055896 Murru_3044 Muricauda ruestringensis DSM 13258 peptidase S10 serine carboxypeptidase YP_004789487.1 3365193 R 886377 CDS YP_004789488.1 344204345 11055897 3366820..3367959 1 NC_015945.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: rbi:RB2501_15414 glucose-fructose oxidoreductase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; PRIAM: Glucose-fructose oxidoreductase; SPTR: Glucose-fructose oxidoreductase; glucose-fructose oxidoreductase 3367959 11055897 Murru_3045 Muricauda ruestringensis DSM 13258 glucose-fructose oxidoreductase YP_004789488.1 3366820 D 886377 CDS YP_004789489.1 344204346 11055898 3368163..3368708 1 NC_015945.1 PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; HAMAP: metal-dependent hydrolase; KEGG: rbi:RB2501_11247 metal-dependent hydrolase; SPTR: Putative uncharacterized protein; metal-dependent hydrolase 3368708 11055898 Murru_3046 Muricauda ruestringensis DSM 13258 metal-dependent hydrolase YP_004789489.1 3368163 D 886377 CDS YP_004789490.1 344204347 11055899 complement(3368710..3369252) 1 NC_015945.1 PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: rbi:RB2501_11252 acetyltransferase (GNAT) family protein; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Acetyltransferase (GNAT) family protein; N-acetyltransferase GCN5 3369252 11055899 Murru_3047 Muricauda ruestringensis DSM 13258 N-acetyltransferase GCN5 YP_004789490.1 3368710 R 886377 CDS YP_004789491.1 344204348 11055900 complement(3369267..3369827) 1 NC_015945.1 PFAM: AhpC/TSA family; InterPro IPR000866; KEGG: fbc:FB2170_01065 hypothetical protein; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Putative uncharacterized protein; alkyl hydroperoxide reductase 3369827 11055900 Murru_3048 Muricauda ruestringensis DSM 13258 alkyl hydroperoxide reductase YP_004789491.1 3369267 R 886377 CDS YP_004789492.1 344204349 11055901 complement(3369923..3370294) 1 NC_015945.1 PFAM: Protein of unknown function (DUF3276); InterPro IPR006628; KEGG: fbc:FB2170_01040 hypothetical protein; SMART: PUR-alpha/beta/gamma, DNA/RNA-binding; SPTR: Putative uncharacterized protein; PUR-alpha/beta/gamma DNA/RNA-binding protein 3370294 11055901 Murru_3049 Muricauda ruestringensis DSM 13258 PUR-alpha/beta/gamma DNA/RNA-binding protein YP_004789492.1 3369923 R 886377 CDS YP_004789493.1 344204350 11055902 complement(3370370..3372124) 1 NC_015945.1 PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140:IPR003439:IPR003593; KEGG: fbc:FB2170_01035 MDR family ABC transporter ATP-binding protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein, MDR family; xenobiotic-transporting ATPase 3372124 11055902 Murru_3050 Muricauda ruestringensis DSM 13258 xenobiotic-transporting ATPase YP_004789493.1 3370370 R 886377 CDS YP_004789494.1 344204351 11055903 3372306..3373253 1 NC_015945.1 PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB; COGs: COG0781 Transcription termination factor; HAMAP: NusB antitermination factor; InterPro IPR011605:IPR006027; KEGG: fbc:FB2170_01030 putative N utilization substance protein; PFAM: NusB/RsmB/TIM44; SPTR: Putative N utilization substance protein; NusB antitermination factor 3373253 11055903 Murru_3051 Muricauda ruestringensis DSM 13258 NusB antitermination factor YP_004789494.1 3372306 D 886377 CDS YP_004789495.1 344204352 11055904 3373292..3373768 1 NC_015945.1 PFAM: Protein of unknown function (DUF1573); InterPro IPR011467; KEGG: fbc:FB2170_01025 hypothetical protein; PFAM: Protein of unknown function DUF1573; SPTR: Putative uncharacterized protein; hypothetical protein 3373768 11055904 Murru_3052 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789495.1 3373292 D 886377 CDS YP_004789496.1 344204353 11055905 3373782..3374075 1 NC_015945.1 PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: rbi:RB2501_11307 YajC; PFAM: Preprotein translocase YajC; SPTR: YajC; TIGRFAM: Preprotein translocase YajC; preprotein translocase subunit YajC 3374075 11055905 Murru_3053 Muricauda ruestringensis DSM 13258 preprotein translocase subunit YajC YP_004789496.1 3373782 D 886377 CDS YP_004789497.1 344204354 11055906 3374169..3375515 1 NC_015945.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: fbc:FB2170_01015 putative NADH-dependent dihydrogenase; PFAM: Oxidoreductase, N-terminal; SPTR: Probable NADH-dependent dihydrogenase; oxidoreductase domain-containing protein 3375515 11055906 Murru_3054 Muricauda ruestringensis DSM 13258 oxidoreductase domain-containing protein YP_004789497.1 3374169 D 886377 CDS YP_004789498.1 344204355 11055907 complement(3375764..3376528) 1 NC_015945.1 PFAM: Protein of unknown function (DUF2400); TIGRFAM: TIGR02757 family protein; InterPro IPR014127; KEGG: fbc:FB2170_10686 hypothetical protein; PFAM: Conserved hypothetical protein CHP02757; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02757; hypothetical protein 3376528 11055907 Murru_3055 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789498.1 3375764 R 886377 CDS YP_004789499.1 344204356 11055908 complement(3376530..3377198) 1 NC_015945.1 PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: fbc:FB2170_10691 lipoprotein releasing system ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Lipoprotein releasing system ATP-binding protein; phosphonate-transporting ATPase 3377198 11055908 Murru_3056 Muricauda ruestringensis DSM 13258 phosphonate-transporting ATPase YP_004789499.1 3376530 R 886377 CDS YP_004789500.1 344204357 11055909 3377485..3378123 1 NC_015945.1 PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; COGs: COG0450 Peroxiredoxin; InterPro IPR000866:IPR019479; KEGG: fbc:FB2170_01075 peroxidase; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Peroxiredoxin, C-terminal; PRIAM: Peroxidase; SPTR: Peroxidase; peroxidase 3378123 11055909 Murru_3057 Muricauda ruestringensis DSM 13258 peroxidase YP_004789500.1 3377485 D 886377 CDS YP_004789501.1 344204358 11055910 3378209..3378403 1 NC_015945.1 PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1278 Cold shock protein; InterPro IPR002059:IPR011129; KEGG: fbc:FB2170_01080 cold shock protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold shock protein; cold-shock DNA-binding domain-containing protein 3378403 11055910 Murru_3058 Muricauda ruestringensis DSM 13258 cold-shock DNA-binding domain-containing protein YP_004789501.1 3378209 D 886377 CDS YP_004789502.1 344204359 11055911 complement(3378951..3379883) 1 NC_015945.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130:IPR001179; KEGG: fbc:FB2170_01095 peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type; PRIAM: Peptidylprolyl isomerase; SPTR: Peptidyl-prolyl cis-trans isomerase; peptidyl-prolyl isomerase 3379883 11055911 Murru_3059 Muricauda ruestringensis DSM 13258 peptidyl-prolyl isomerase YP_004789502.1 3378951 R 886377 CDS YP_004789503.1 344204360 11055912 3380281..3380841 1 NC_015945.1 PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; COGs: COG0225 Peptide methionine sulfoxide reductase; HAMAP: Peptide methionine sulphoxide reductase MsrA; InterPro IPR002569; KEGG: gfo:GFO_1461 peptide methionine sulfoxide reductase; PFAM: Peptide methionine sulphoxide reductase MsrA; PRIAM: Peptide-methionine (S)-S-oxide reductase; SPTR: Peptide methionine sulfoxide reductase msrA 1; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; peptide methionine sulfoxide reductase MsrA 3380841 11055912 Murru_3060 Muricauda ruestringensis DSM 13258 peptide methionine sulfoxide reductase MsrA YP_004789503.1 3380281 D 886377 CDS YP_004789504.1 344204361 11055913 3380828..3381427 1 NC_015945.1 PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; COGs: COG0302 GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; InterPro IPR001474:IPR020602; KEGG: rbi:RB2501_15379 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: GTP cyclohydrolase I; SPTR: GTP cyclohydrolase 1 2; TIGRFAM: GTP cyclohydrolase I; GTP cyclohydrolase 1 3381427 11055913 Murru_3061 Muricauda ruestringensis DSM 13258 GTP cyclohydrolase 1 YP_004789504.1 3380828 D 886377 CDS YP_004789505.1 344204362 11055914 3381468..3381764 1 NC_015945.1 KEGG: fbc:FB2170_10701 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3381764 11055914 Murru_3062 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789505.1 3381468 D 886377 CDS YP_004789506.1 344204363 11055915 complement(3381883..3384153) 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: zpr:ZPR_2129 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent outer membrane receptor; TonB-dependent receptor plug 3384153 11055915 Murru_3063 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004789506.1 3381883 R 886377 CDS YP_004789507.1 344204364 11055916 complement(3384217..3384555) 1 NC_015945.1 KEGG: fbc:FB2170_10711 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3384555 11055916 Murru_3064 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789507.1 3384217 R 886377 CDS YP_004789508.1 344204365 11055917 complement(3384610..3385080) 1 NC_015945.1 KEGG: cat:CA2559_08661 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3385080 11055917 Murru_3065 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789508.1 3384610 R 886377 CDS YP_004789509.1 344204366 11055918 complement(3385159..3385653) 1 NC_015945.1 KEGG: fbc:FB2170_10721 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3385653 11055918 Murru_3066 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789509.1 3385159 R 886377 CDS YP_004789510.1 344204367 11055919 complement(3385685..3386326) 1 NC_015945.1 PFAM: Bacterial protein of unknown function (DUF937); KEGG: fbc:FB2170_10726 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 3386326 11055919 Murru_3067 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789510.1 3385685 R 886377 CDS YP_004789511.1 344204368 11055920 complement(3386403..3387356) 1 NC_015945.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: fbc:FB2170_10731 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; PRIAM: Phosphoglycerate dehydrogenase; SPTR: D-3-phosphoglycerate dehydrogenase; phosphoglycerate dehydrogenase 3387356 11055920 Murru_3068 Muricauda ruestringensis DSM 13258 phosphoglycerate dehydrogenase YP_004789511.1 3386403 R 886377 CDS YP_004789512.1 344204369 11055921 complement(3387362..3388426) 1 NC_015945.1 PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase; COGs: COG1932 Phosphoserine aminotransferase; HAMAP: Phosphoserine aminotransferase; InterPro IPR022278:IPR000192; KEGG: fbc:FB2170_10736 phosphoserine aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Phosphoserine transaminase; SPTR: Phosphoserine aminotransferase; phosphoserine aminotransferase 3388426 11055921 Murru_3069 Muricauda ruestringensis DSM 13258 phosphoserine aminotransferase YP_004789512.1 3387362 R 886377 CDS YP_004789513.1 344204370 11055922 complement(3388498..3389544) 1 NC_015945.1 PFAM: Acyl-CoA reductase (LuxC); InterPro IPR008670; KEGG: zpr:ZPR_2136 acyl-CoA reductase; PFAM: Acyl-CoA reductase; SPTR: Acyl-CoA reductase; acyl-CoA reductase 3389544 11055922 Murru_3070 Muricauda ruestringensis DSM 13258 acyl-CoA reductase YP_004789513.1 3388498 R 886377 CDS YP_004789514.1 344204371 11055923 3389630..3389983 1 NC_015945.1 InterPro IPR001450; KEGG: rbi:RB2501_15329 3Fe-4S ferredoxin:4Fe-4S ferredoxin; PFAM: 4Fe-4S binding domain; SPTR: 3Fe-4S ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 3389983 11055923 Murru_3071 Muricauda ruestringensis DSM 13258 4Fe-4S ferredoxin YP_004789514.1 3389630 D 886377 CDS YP_004789515.1 344204372 11055924 3390218..3391312 1 NC_015945.1 PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; COGs: COG0012 GTPase probable translation factor; InterPro IPR004396:IPR002917:IPR013029; KEGG: fbc:FB2170_10756 GTP-binding protein; PFAM: Domain of unknown function DUF933; GTP-binding protein, HSR1-related; SPTR: GTP-binding protein; TIGRFAM: Conserved hypothetical protein CHP00092; GTP-binding protein YchF 3391312 11055924 Murru_3072 Muricauda ruestringensis DSM 13258 GTP-binding protein YchF YP_004789515.1 3390218 D 886377 CDS YP_004789516.1 344204373 11055925 3391380..3392282 1 NC_015945.1 PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: fbc:FB2170_10761 hypothetical protein; PFAM: Drug/metabolite transporter; SPTR: Putative uncharacterized protein; hypothetical protein 3392282 11055925 Murru_3073 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789516.1 3391380 D 886377 CDS YP_004789517.1 344204374 11055926 3392385..3394253 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterPro IPR003594:IPR013506:IPR006171:IPR001241; KEGG: rbi:RB2501_15314 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, domain 2; ATPase-like, ATP-binding domain; Toprim domain; SMART: DNA topoisomerase, type IIA, subunit B/N-terminal; ATPase-like, ATP-binding domain; SPTR: DNA topoisomerase IV subunit B; DNA topoisomerase type IIA subunit B domain-containing protein 3394253 11055926 Murru_3074 Muricauda ruestringensis DSM 13258 DNA topoisomerase type IIA subunit B domain-containing protein YP_004789517.1 3392385 D 886377 CDS YP_004789518.1 344204375 11055927 3394269..3396896 1 NC_015945.1 PFAM: DNA gyrase/topoisomerase IV, subunit A; COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR002205; KEGG: fbc:FB2170_10771 DNA topoisomerase IV subunit A; PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit A/C-terminal; SPTR: DNA topoisomerase IV subunit A; DNA topoisomerase 3396896 11055927 Murru_3075 Muricauda ruestringensis DSM 13258 DNA topoisomerase YP_004789518.1 3394269 D 886377 CDS YP_004789519.1 344204376 11055928 3396960..3397922 1 NC_015945.1 PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: fbc:FB2170_10781 hypothetical protein; PFAM: Fatty acid hydroxylase; SPTR: Putative uncharacterized protein; fatty acid hydroxylase 3397922 11055928 Murru_3076 Muricauda ruestringensis DSM 13258 fatty acid hydroxylase YP_004789519.1 3396960 D 886377 CDS YP_004789520.1 344204377 11055929 complement(3397963..3398340) 1 NC_015945.1 KEGG: rbi:RB2501_15294 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3398340 11055929 Murru_3077 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789520.1 3397963 R 886377 CDS YP_004789521.1 344204378 11055930 complement(3398373..3398780) 1 NC_015945.1 PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: fjo:Fjoh_2803 bacteriophage CI repressor; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; helix-turn-helix domain-containing protein 3398780 11055930 Murru_3078 Muricauda ruestringensis DSM 13258 helix-turn-helix domain-containing protein YP_004789521.1 3398373 R 886377 CDS YP_004789522.1 344204379 11055931 3399065..3400168 1 NC_015945.1 PFAM: Zinc carboxypeptidase; InterPro IPR000834; KEGG: fbc:FB2170_10801 hypothetical protein; PFAM: Peptidase M14, carboxypeptidase A; SPTR: Putative uncharacterized protein; peptidase M14 carboxypeptidase A 3400168 11055931 Murru_3079 Muricauda ruestringensis DSM 13258 peptidase M14 carboxypeptidase A YP_004789522.1 3399065 D 886377 CDS YP_004789523.1 344204380 11055932 3400268..3400747 1 NC_015945.1 PFAM: AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019887:IPR019888; KEGG: rbi:RB2501_15279 putative transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; SPTR: Probable transcriptional regulator; AsnC family transcriptional regulator 3400747 11055932 Murru_3080 Muricauda ruestringensis DSM 13258 AsnC family transcriptional regulator YP_004789523.1 3400268 D 886377 CDS YP_004789524.1 344204381 11055933 3400766..3401284 1 NC_015945.1 PFAM: Protein of unknown function (DUF664); KEGG: fbc:FB2170_10811 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3401284 11055933 Murru_3081 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789524.1 3400766 D 886377 CDS YP_004789525.1 344204382 11055934 complement(3401286..3401612) 1 NC_015945.1 KEGG: fbc:FB2170_10816 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3401612 11055934 Murru_3082 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789525.1 3401286 R 886377 CDS YP_004789526.1 344204383 11055935 complement(3401707..3402762) 1 NC_015945.1 PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; COGs: COG0337 3-dehydroquinate synthetase; HAMAP: 3-dehydroquinate synthase AroB, subgroup; InterPro IPR016037:IPR002658; KEGG: fbc:FB2170_10821 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase AroB; PRIAM: 3-dehydroquinate synthase; SPTR: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; 3-dehydroquinate synthase 3402762 11055935 Murru_3083 Muricauda ruestringensis DSM 13258 3-dehydroquinate synthase YP_004789526.1 3401707 R 886377 CDS YP_004789527.1 344204384 11055936 3402854..3404026 1 NC_015945.1 PFAM: Proline dehydrogenase; InterPro IPR002872; KEGG: fbc:FB2170_10826 CpmD protein involved in carbapenem biosynthesis; PFAM: Proline dehydrogenase; SPTR: Proline dehydrogenase; proline dehydrogenase 3404026 11055936 Murru_3084 Muricauda ruestringensis DSM 13258 proline dehydrogenase YP_004789527.1 3402854 D 886377 CDS YP_004789528.1 344204385 11055937 3404197..3405366 1 NC_015945.1 KEGG: zpr:ZPR_4404 secretion protein HlyD family protein; SPTR: Secretion protein HlyD family protein; secretion protein HlyD family protein 3405366 11055937 Murru_3085 Muricauda ruestringensis DSM 13258 secretion protein HlyD family protein YP_004789528.1 3404197 D 886377 CDS YP_004789529.1 344204386 11055938 3405368..3407548 1 NC_015945.1 PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family; TIGRFAM: ABC-type bacteriocin transporter; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR005897:IPR005074:IPR001140:IPR003439:IPR 003593; KEGG: zpr:ZPR_4399 probable bacteriocin/lantibiotic ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; Peptidase C39, bacteriocin processing; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Probable bacteriocin/lantibiotic ABC transporter, ATP-binding protein; TIGRFAM: Peptidase C39, ABC-type bacteriocin transporter; bacteriocin ABC transporter 3407548 11055938 Murru_3086 Muricauda ruestringensis DSM 13258 bacteriocin ABC transporter YP_004789529.1 3405368 D 886377 CDS YP_004789530.1 344204387 11055939 3407560..3407871 1 NC_015945.1 PFAM: HTH domain; KEGG: cpi:Cpin_1491 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3407871 11055939 Murru_3087 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789530.1 3407560 D 886377 CDS YP_004789531.1 344204388 11055940 3408003..3408170 1 NC_015945.1 hypothetical protein 3408170 11055940 Murru_3088 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789531.1 3408003 D 886377 CDS YP_004789532.1 344204389 11055941 3408192..3408341 1 NC_015945.1 hypothetical protein 3408341 11055941 Murru_3089 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789532.1 3408192 D 886377 CDS YP_004789533.1 344204390 11055942 3408630..3408791 1 NC_015945.1 hypothetical protein 3408791 11055942 Murru_3090 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789533.1 3408630 D 886377 CDS YP_004789534.1 344204391 11055943 3408794..3409054 1 NC_015945.1 hypothetical protein 3409054 11055943 Murru_3091 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789534.1 3408794 D 886377 CDS YP_004789535.1 344204392 11055944 3409081..3410310 1 NC_015945.1 KEGG: sli:Slin_1146 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3410310 11055944 Murru_3092 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789535.1 3409081 D 886377 CDS YP_004789536.1 344204393 11055945 3410604..3410813 1 NC_015945.1 hypothetical protein 3410813 11055945 Murru_3093 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789536.1 3410604 D 886377 CDS YP_004789537.1 344204394 11055946 3410933..3411091 1 NC_015945.1 hypothetical protein 3411091 11055946 Murru_3094 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789537.1 3410933 D 886377 CDS YP_004789538.1 344204395 11055947 complement(3411106..3411591) 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: fba:FIC_01251 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: DNA-binding response regulator, AraC family protein; AraC family transcriptional regulator 3411591 11055947 Murru_3095 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004789538.1 3411106 R 886377 CDS YP_004789539.1 344204396 11055948 complement(3411699..3412076) 1 NC_015945.1 KEGG: fbc:FB2170_10831 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3412076 11055948 Murru_3096 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789539.1 3411699 R 886377 CDS YP_004789540.1 344204397 11055949 complement(3412082..3413281) 1 NC_015945.1 PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase; COGs: COG0686 Alanine dehydrogenase; InterPro IPR007886:IPR007698; KEGG: fbc:FB2170_10836 alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, N-terminal; Alanine dehydrogenase/PNT, C-terminal; PRIAM: Alanine dehydrogenase; SPTR: Alanine dehydrogenase; Alanine dehydrogenase 3413281 11055949 Murru_3097 Muricauda ruestringensis DSM 13258 Alanine dehydrogenase YP_004789540.1 3412082 R 886377 CDS YP_004789541.1 344204398 11055950 complement(3413489..3414028) 1 NC_015945.1 KEGG: fbc:FB2170_10841 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3414028 11055950 Murru_3098 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789541.1 3413489 R 886377 CDS YP_004789542.1 344204399 11055951 complement(3414123..3414257) 1 NC_015945.1 hypothetical protein 3414257 11055951 Murru_3099 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789542.1 3414123 R 886377 CDS YP_004789543.1 344204400 11055952 complement(3414432..3414848) 1 NC_015945.1 PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: fbc:FB2170_10856 hypothetical protein; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; ATPase 3414848 11055952 Murru_3100 Muricauda ruestringensis DSM 13258 ATPase YP_004789543.1 3414432 R 886377 CDS YP_004789544.1 344204401 11055953 complement(3414856..3416400) 1 NC_015945.1 PFAM: PglZ domain; Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR013973; KEGG: fbc:FB2170_10861 response regulator; PFAM: Signal transduction response regulator, receiver domain; PglZ domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Response regulator; response regulator receiver protein 3416400 11055953 Murru_3101 Muricauda ruestringensis DSM 13258 response regulator receiver protein YP_004789544.1 3414856 R 886377 CDS YP_004789545.1 344204402 11055954 3416438..3417661 1 NC_015945.1 PFAM: HD domain; COGs: COG1078 HD superfamily phosphohydrolase; InterPro IPR006674:IPR003607; KEGG: gfo:GFO_1777 metal-dependent phosphohydrolase family protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Metal-dependent phosphohydrolase family protein; metal dependent phosphohydrolase 3417661 11055954 Murru_3102 Muricauda ruestringensis DSM 13258 metal dependent phosphohydrolase YP_004789545.1 3416438 D 886377 CDS YP_004789546.1 344204403 11055955 3417685..3418719 1 NC_015945.1 PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); HAMAP: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; InterPro IPR007691:IPR020573:IPR001451; KEGG: fbc:FB2170_10871 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat; SPTR: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 3418719 11055955 Murru_3103 Muricauda ruestringensis DSM 13258 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_004789546.1 3417685 D 886377 CDS YP_004789547.1 344204404 11055956 3418703..3420115 1 NC_015945.1 PFAM: FabA-like domain; UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ; COGs: COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; HAMAP: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; InterPro IPR010084:IPR004463:IPR013114; KEGG: rbi:RB2501_15199 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; PFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; SPTR: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; UDP-3-O-acyl N-acetylglucosamine deacetylase; (3R)-hydroxymyristoyl-ACP dehydratase 3420115 11055956 Murru_3104 Muricauda ruestringensis DSM 13258 (3R)-hydroxymyristoyl-ACP dehydratase YP_004789547.1 3418703 D 886377 CDS YP_004789548.1 344204405 11055957 3420116..3420901 1 NC_015945.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; COGs: COG1043 Acyl-(acyl carrier protein); InterPro IPR010137:IPR001451; KEGG: fbc:FB2170_10881 UDP-N-acetylglucosamine acyltransferase; PFAM: Bacterial transferase hexapeptide repeat; PRIAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgluc osamineO-acyltransferase; SPTR: UDP-N-acetylglucosamine acyltransferase; TIGRFAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgl ucosamineO-acyltransferase; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 3420901 11055957 Murru_3105 Muricauda ruestringensis DSM 13258 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase YP_004789548.1 3420116 D 886377 CDS YP_004789549.1 344204406 11055958 3420906..3421472 1 NC_015945.1 PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); HAMAP: Translation elongation factor P; InterPro IPR011768:IPR013185:IPR001059:IPR015365; KEGG: fbc:FB2170_10886 elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central; SMART: Elongation factor P, C-terminal; SPTR: Elongation factor P; TIGRFAM: Translation elongation factor P; elongation factor P 3421472 11055958 Murru_3106 Muricauda ruestringensis DSM 13258 elongation factor P YP_004789549.1 3420906 D 886377 CDS YP_004789550.1 344204407 11055959 3421478..3422413 1 NC_015945.1 PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); InterPro IPR007691:IPR020573:IPR001451; KEGG: fjo:Fjoh_2900 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat; SPTR: UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 3422413 11055959 Murru_3107 Muricauda ruestringensis DSM 13258 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_004789550.1 3421478 D 886377 CDS YP_004789551.1 344204408 11055960 3422474..3423346 1 NC_015945.1 PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit; COGs: COG0074 Succinyl-CoA synthetase alpha subunit; InterPro IPR005810:IPR003781:IPR005811; KEGG: fbc:FB2170_10896 succinyl-CoA synthetase subunit alpha; PFAM: CoA-binding; ATP-citrate lyase/succinyl-CoA ligase; PRIAM: Succinate--CoA ligase (ADP-forming); SMART: CoA-binding; SPTR: Succinyl-CoA ligase [ADP-forming] subunit alpha; TIGRFAM: Succinyl-CoA ligase, alpha subunit; succinyl-CoA synthetase subunit alpha 3423346 11055960 Murru_3108 Muricauda ruestringensis DSM 13258 succinyl-CoA synthetase subunit alpha YP_004789551.1 3422474 D 886377 CDS YP_004789552.1 344204409 11055961 3423644..3424393 1 NC_015945.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR011284:IPR002198:IPR020842; KEGG: fbc:FB2170_10901 putative 3-oxoacyl-[acyl-carrier protein] reductase; PFAM: Short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; SPTR: Putative 3-oxoacyl-[acyl-carrier protein] reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-ACP reductase 3424393 11055961 Murru_3109 Muricauda ruestringensis DSM 13258 3-oxoacyl-ACP reductase YP_004789552.1 3423644 D 886377 CDS YP_004789553.1 344204410 11055962 3424399..3426432 1 NC_015945.1 KEGG: fbc:FB2170_10906 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3426432 11055962 Murru_3110 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789553.1 3424399 D 886377 CDS YP_004789554.1 344204411 11055963 3426445..3427260 1 NC_015945.1 PFAM: SPFH domain / Band 7 family; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107; KEGG: rbi:RB2501_15164 membrane protease subunit stomatin/prohibitin-like protein; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: Membrane protease subunit stomatin/prohibitin-like protein; hypothetical protein 3427260 11055963 Murru_3111 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789554.1 3426445 D 886377 CDS YP_004789555.1 344204412 11055964 3427461..3428318 1 NC_015945.1 PFAM: HisG, C-terminal domain; ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, C-terminal domain; ATP phosphoribosyltransferase; COGs: COG0040 ATP phosphoribosyltransferase; HAMAP: Histidine biosynthesis HisG, ATP phosphoribosyltransferase, subgroup; InterPro IPR020621:IPR013820:IPR013115; KEGG: fbc:FB2170_10916 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase, catalytic domain; Histidine biosynthesis HisG, C-terminal; PRIAM: ATP phosphoribosyltransferase; SPTR: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, catalytic domain; Histidine biosynthesis HisG, C-terminal; ATP phosphoribosyltransferase 3428318 11055964 Murru_3112 Muricauda ruestringensis DSM 13258 ATP phosphoribosyltransferase YP_004789555.1 3427461 D 886377 CDS YP_004789556.1 344204413 11055965 3428318..3429601 1 NC_015945.1 PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; COGs: COG0141 Histidinol dehydrogenase; HAMAP: Histidinol dehydrogenase, prokaryotic-type; InterPro IPR012131; KEGG: cat:CA2559_09011 putative histidinol dehydrogenase; PFAM: Histidinol dehydrogenase, prokaryotic-type; PRIAM: Histidinol dehydrogenase; SPTR: Histidinol dehydrogenase; TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; histidinol dehydrogenase 3429601 11055965 Murru_3113 Muricauda ruestringensis DSM 13258 histidinol dehydrogenase YP_004789556.1 3428318 D 886377 CDS YP_004789557.1 344204414 11055966 3429601..3430644 1 NC_015945.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; HAMAP: Histidinol-phosphate aminotransferase; InterPro IPR005861:IPR004839; KEGG: fbc:FB2170_10926 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: Histidinol-phosphate transaminase; SPTR: Histidinol-phosphate aminotransferase; TIGRFAM: Histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 3430644 11055966 Murru_3114 Muricauda ruestringensis DSM 13258 histidinol-phosphate aminotransferase YP_004789557.1 3429601 D 886377 CDS YP_004789558.1 344204415 11055967 3430647..3431783 1 NC_015945.1 PFAM: Imidazoleglycerol-phosphate dehydratase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain; histidinol-phosphatase; COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; HAMAP: Imidazoleglycerol-phosphate dehydratase; InterPro IPR000807:IPR005954:IPR006543:IPR013954; KEGG: fbc:FB2170_10931 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; PFAM: Imidazoleglycerol-phosphate dehydratase; Polynucleotide kinase 3 phosphatase, central region; PRIAM: Histidinol-phosphatase; SPTR: Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; TIGRFAM: Histidinol-phosphatase; Histidinol-phosphate phosphatase; imidazoleglycerol-phosphate dehydratase 3431783 11055967 Murru_3115 Muricauda ruestringensis DSM 13258 imidazoleglycerol-phosphate dehydratase YP_004789558.1 3430647 D 886377 CDS YP_004789559.1 344204416 11055968 3431864..3432448 1 NC_015945.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; COGs: COG0118 Glutamine amidotransferase; HAMAP: Imidazole glycerol phosphate synthase, subunit H; InterPro IPR010139:IPR000991; KEGG: fbc:FB2170_10936 imidazole glycerol phosphate synthase subunit; PFAM: Glutamine amidotransferase class-I, C-terminal; SPTR: Imidazole glycerol phosphate synthase subunit; TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; imidazole glycerol phosphate synthase subunit HisH 3432448 11055968 Murru_3116 Muricauda ruestringensis DSM 13258 imidazole glycerol phosphate synthase subunit HisH YP_004789559.1 3431864 D 886377 CDS YP_004789560.1 344204417 11055969 3432450..3432866 1 NC_015945.1 PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: fbc:FB2170_10941 acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Acetyltransferase; N-acetyltransferase GCN5 3432866 11055969 Murru_3117 Muricauda ruestringensis DSM 13258 N-acetyltransferase GCN5 YP_004789560.1 3432450 D 886377 CDS YP_004789561.1 344204418 11055970 3432870..3433598 1 NC_015945.1 PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; HAMAP: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; InterPro IPR023016:IPR006063:IPR006062; KEGG: zpr:ZPR_2392 phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide(ProFAR) isomerase; PFAM: Histidine biosynthesis; PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase; SPTR:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 3433598 11055970 Murru_3118 Muricauda ruestringensis DSM 13258 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_004789561.1 3432870 D 886377 CDS YP_004789562.1 344204419 11055971 3433591..3434115 1 NC_015945.1 PFAM: Protein of unknown function (DUF1572); KEGG: rbi:RB2501_15129 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3434115 11055971 Murru_3119 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789562.1 3433591 D 886377 CDS YP_004789563.1 344204420 11055972 3434326..3435081 1 NC_015945.1 PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; COGs: COG0107 Imidazoleglycerol-phosphate synthase; HAMAP: Histidine biosynthesis, HisF; InterPro IPR004651:IPR006062; KEGG: fjo:Fjoh_2872 imidazole glycerol phosphate synthase subunit HisF; PFAM: Histidine biosynthesis; PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase; SPTR: Imidazole glycerol phosphate synthase subunit hisF; TIGRFAM: Histidine biosynthesis, HisF; imidazole glycerol phosphate synthase subunit HisF 3435081 11055972 Murru_3120 Muricauda ruestringensis DSM 13258 imidazole glycerol phosphate synthase subunit HisF YP_004789563.1 3434326 D 886377 CDS YP_004789564.1 344204421 11055973 3435155..3435751 1 NC_015945.1 PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; HAMAP: Phosphoribosyl-ATP pyrophosphohydrolase; Histidine biosynthesis bifunctional protein HisIE; InterPro IPR023019:IPR008179:IPR002496:IPR021130; KEGG: gfo:GFO_1757 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; PFAM: Phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphohydrolase-like; SPTR: Histidine biosynthesis bifunctional protein HisIE; TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphatase 3435751 11055973 Murru_3121 Muricauda ruestringensis DSM 13258 phosphoribosyl-ATP pyrophosphatase YP_004789564.1 3435155 D 886377 CDS YP_004789565.1 344204422 11055974 3435815..3436978 1 NC_015945.1 COGs: COG4867 Uncharacterized protein with a von Willebrand factor type A (vWA) domain; KEGG: fbc:FB2170_11141 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3436978 11055974 Murru_3122 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789565.1 3435815 D 886377 CDS YP_004789566.1 344204423 11055975 3436987..3438456 1 NC_015945.1 COGs: COG1239 Mg-chelatase subunit ChlI; KEGG: fbc:FB2170_11151 magnesium chelatase subunit ChlI family protein; SPTR: Magnesium chelatase, subunit ChlI family protein; magnesium chelatase subunit ChlI family protein 3438456 11055975 Murru_3123 Muricauda ruestringensis DSM 13258 magnesium chelatase subunit ChlI family protein YP_004789566.1 3436987 D 886377 CDS YP_004789567.1 344204424 11055976 complement(3438457..3438969) 1 NC_015945.1 KEGG: fbc:FB2170_11176 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3438969 11055976 Murru_3124 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789567.1 3438457 R 886377 CDS YP_004789568.1 344204425 11055977 complement(3439088..3439972) 1 NC_015945.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase B; COGs: COG0031 Cysteine synthase; InterPro IPR005858:IPR005856:IPR001926; KEGG: fbc:FB2170_11201 cysteine synthase B; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Cysteine synthase; SPTR: Cysteine synthase; TIGRFAM: Cysteine synthase K/M; Cysteine synthase B; cysteine synthase 3439972 11055977 Murru_3125 Muricauda ruestringensis DSM 13258 cysteine synthase YP_004789568.1 3439088 R 886377 CDS YP_004789569.1 344204426 11055978 complement(3439965..3440756) 1 NC_015945.1 TIGRFAM: serine O-acetyltransferase; COGs: COG1045 Serine acetyltransferase; InterPro IPR001451; KEGG: fbc:FB2170_11206 hypothetical protein; PRIAM: Serine O-acetyltransferase; SPTR: Putative uncharacterized protein; Serine O-acetyltransferase 3440756 11055978 Murru_3126 Muricauda ruestringensis DSM 13258 Serine O-acetyltransferase YP_004789569.1 3439965 R 886377 CDS YP_004789570.1 344204427 11055979 3440848..3441528 1 NC_015945.1 PFAM: Conserved hypothetical protein (DUF2461); TIGRFAM: TIGR02453 family protein; COGs: COG5587 conserved hypothetical protein; InterPro IPR012808; KEGG: fbc:FB2170_11211 hypothetical protein; PFAM: Conserved hypothetical protein CHP02453; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02453; hypothetical protein 3441528 11055979 Murru_3127 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789570.1 3440848 D 886377 CDS YP_004789571.1 344204428 11055980 complement(3441517..3441930) 1 NC_015945.1 KEGG: rbi:RB2501_15064 glyoxalase family protein; SPTR: Glyoxalase family protein; glyoxalase 3441930 11055980 Murru_3128 Muricauda ruestringensis DSM 13258 glyoxalase YP_004789571.1 3441517 R 886377 CDS YP_004789572.1 344204429 11055981 3441958..3442116 1 NC_015945.1 hypothetical protein 3442116 11055981 Murru_3129 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789572.1 3441958 D 886377 CDS YP_004789573.1 344204430 11055982 3442274..3442495 1 NC_015945.1 KEGG: gfo:GFO_1133 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3442495 11055982 Murru_3130 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789573.1 3442274 D 886377 CDS YP_004789574.1 344204431 11055983 3442498..3442800 1 NC_015945.1 PFAM: Plasmid stabilisation system protein; InterPro IPR007712; KEGG: cch:Cag_1051 hypothetical protein; PFAM: Plasmid stabilisation system; SPTR: Putative uncharacterized protein; plasmid stabilization system 3442800 11055983 Murru_3131 Muricauda ruestringensis DSM 13258 plasmid stabilization system YP_004789574.1 3442498 D 886377 CDS YP_004789575.1 344204432 11055984 3442843..3443742 1 NC_015945.1 PFAM: Protein of unknown function DUF72; COGs: COG1801 conserved hypothetical protein; InterPro IPR002763; KEGG: fbc:FB2170_11221 hypothetical protein; PFAM: Protein of unknown function DUF72; SPTR: Putative uncharacterized protein; hypothetical protein 3443742 11055984 Murru_3132 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789575.1 3442843 D 886377 CDS YP_004789576.1 344204433 11055985 3444106..3444525 1 NC_015945.1 PFAM: Thioesterase superfamily; COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: rbi:RB2501_15054 4-hydroxybenzoyl-CoA thioesterase domain-containing protein; PFAM: Thioesterase superfamily; SPTR: 4-hydroxybenzoyl-CoA thioesterase domain protein; thioesterase superfamily protein 3444525 11055985 Murru_3133 Muricauda ruestringensis DSM 13258 thioesterase superfamily protein YP_004789576.1 3444106 D 886377 CDS YP_004789577.1 344204434 11055986 complement(3444522..3445805) 1 NC_015945.1 PFAM: Membrane dipeptidase (Peptidase family M19); COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR008257; KEGG: rbi:RB2501_15049 dipeptidase; PFAM: Peptidase M19, renal dipeptidase; PRIAM: Membrane dipeptidase; SPTR: Dipeptidase; membrane dipeptidase 3445805 11055986 Murru_3134 Muricauda ruestringensis DSM 13258 membrane dipeptidase YP_004789577.1 3444522 R 886377 CDS YP_004789578.1 344204435 11055987 3445934..3446716 1 NC_015945.1 KEGG: fbc:FB2170_11231 two-component system sensory/regulatory protein; SPTR: Two-component system sensory/regulatory protein (Hybrid family); hypothetical protein 3446716 11055987 Murru_3135 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789578.1 3445934 D 886377 CDS YP_004789579.1 344204436 11055988 3446729..3447082 1 NC_015945.1 hypothetical protein 3447082 11055988 Murru_3136 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789579.1 3446729 D 886377 CDS YP_004789580.1 344204437 11055989 3447171..3447269 1 NC_015945.1 KEGG: rbi:RB2501_15014 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3447269 11055989 Murru_3137 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789580.1 3447171 D 886377 CDS YP_004789581.1 344204438 11055990 3447241..3447399 1 NC_015945.1 hypothetical protein 3447399 11055990 Murru_3138 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789581.1 3447241 D 886377 CDS YP_004789582.1 344204439 11055991 complement(3447645..3448508) 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR014284:IPR009042:IPR007627:IPR007624:IPR 007630; KEGG: rbi:RB2501_15004 putative sigma factor A; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 3; SPTR: Putative sigma factor A; TIGRFAM: RNA polymerase sigma-70; RpoD subfamily RNA polymerase sigma-70 subunit 3448508 11055991 Murru_3139 Muricauda ruestringensis DSM 13258 RpoD subfamily RNA polymerase sigma-70 subunit YP_004789582.1 3447645 R 886377 CDS YP_004789583.1 344204440 11055992 3448753..3450264 1 NC_015945.1 PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR006935:IPR001650:IPR014001; KEGG: fbc:FB2170_11286 hypothetical protein; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: Putative uncharacterized protein; type III restriction protein res subunit 3450264 11055992 Murru_3140 Muricauda ruestringensis DSM 13258 type III restriction protein res subunit YP_004789583.1 3448753 D 886377 CDS YP_004789584.1 344204441 11055993 3450673..3451899 1 NC_015945.1 KEGG: fbc:FB2170_11291 putative glycosyltransferase; SPTR: Putative glycosyltransferase; putative glycosyltransferase 3451899 11055993 Murru_3141 Muricauda ruestringensis DSM 13258 putative glycosyltransferase YP_004789584.1 3450673 D 886377 CDS YP_004789585.1 344204442 11055994 complement(3452399..3454570) 1 NC_015945.1 PFAM: MutS domain V; COGs: COG1193 Mismatch repair ATPase (MutS family); InterPro IPR000432:IPR007696; KEGG: fbc:FB2170_11946 putative DNA mismatch repair MutS protein; PFAM: DNA mismatch repair protein MutS, C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; SPTR: Putative DNA mismatch repair MutS protein; DNA mismatch repair protein MutS domain-containing protein 3454570 11055994 Murru_3142 Muricauda ruestringensis DSM 13258 DNA mismatch repair protein MutS domain-containing protein YP_004789585.1 3452399 R 886377 CDS YP_004789586.1 344204443 11055995 3454808..3455473 1 NC_015945.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase; COGs: COG0692 Uracil DNA glycosylase; HAMAP: Uracil-DNA glycosylase; InterPro IPR002043:IPR005122; KEGG: fbc:FB2170_11911 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase-like; SPTR: Uracil-DNA glycosylase; TIGRFAM: Uracil-DNA glycosylase; uracil-DNA glycosylase 3455473 11055995 Murru_3143 Muricauda ruestringensis DSM 13258 uracil-DNA glycosylase YP_004789586.1 3454808 D 886377 CDS YP_004789587.1 344204444 11055996 complement(3455484..3456332) 1 NC_015945.1 PFAM: NMT1/THI5 like; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: fbc:FB2170_11906 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3456332 11055996 Murru_3144 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789587.1 3455484 R 886377 CDS YP_004789588.1 344204445 11055997 complement(3456404..3457291) 1 NC_015945.1 PFAM: Phosphorylase superfamily; COGs: COG2820 Uridine phosphorylase; InterPro IPR000845; KEGG: fbc:FB2170_11901 phosphorylase family protein; PFAM: Nucleoside phosphorylase domain; SPTR: Purine nucleoside phosphorylase II; purine or other phosphorylase family 1 3457291 11055997 Murru_3145 Muricauda ruestringensis DSM 13258 purine or other phosphorylase family 1 YP_004789588.1 3456404 R 886377 CDS YP_004789589.1 344204446 11055998 complement(3457295..3458227) 1 NC_015945.1 KEGG: fbc:FB2170_11896 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3458227 11055998 Murru_3146 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789589.1 3457295 R 886377 CDS YP_004789590.1 344204447 11055999 complement(3458372..3458701) 1 NC_015945.1 PFAM: Translation initiation factor SUI1; TIGRFAM: translation initation factor SUI1, putative, prokaryotic; COGs: COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related protein; InterPro IPR001950; KEGG: fbc:FB2170_11891 putative translation initiation factor SUI1; PFAM: Translation initiation factor SUI1; SPTR: Putative translation initiation factor SUI1; translation initiation factor SUI1 3458701 11055999 Murru_3147 Muricauda ruestringensis DSM 13258 translation initiation factor SUI1 YP_004789590.1 3458372 R 886377 CDS YP_004789591.1 344204448 11056000 complement(3458866..3459816) 1 NC_015945.1 PFAM: 2OG-Fe(II) oxygenase superfamily; COGs: COG3491 Isopenicillin N synthase and related dioxygenase; InterPro IPR005123; KEGG: fbc:FB2170_11886 oxidoreductase; PFAM: Oxoglutarate/iron-dependent oxygenase; SPTR: Oxidoreductase; 2OG-Fe(II) oxygenase 3459816 11056000 Murru_3148 Muricauda ruestringensis DSM 13258 2OG-Fe(II) oxygenase YP_004789591.1 3458866 R 886377 CDS YP_004789592.1 344204449 11056001 3459927..3461906 1 NC_015945.1 PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR001017:IPR005475:IPR005476; KEGG: cat:CA2559_10943 putative oxidoreductase; PFAM: Dehydrogenase, E1 component; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)., Pyruvate dehydrogenase (acetyl-transferring); SMART: Transketolase-like, pyrimidine-binding domain; SPTR: 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion; 2-oxoisovalerate dehydrogenase, E1 subunit 3461906 11056001 Murru_3149 Muricauda ruestringensis DSM 13258 2-oxoisovalerate dehydrogenase, E1 subunit YP_004789592.1 3459927 D 886377 CDS YP_004789593.1 344204450 11056002 3461994..3462479 1 NC_015945.1 KEGG: fbc:FB2170_11876 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3462479 11056002 Murru_3150 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789593.1 3461994 D 886377 CDS YP_004789594.1 344204451 11056003 3462484..3463176 1 NC_015945.1 PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR008816:IPR006665; KEGG: fbc:FB2170_11871 OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Rickettsia 17kDa surface antigen; SPTR: OmpA family protein; OmpA/MotB domain-containing protein 3463176 11056003 Murru_3151 Muricauda ruestringensis DSM 13258 OmpA/MotB domain-containing protein YP_004789594.1 3462484 D 886377 CDS YP_004789595.1 344204452 11056004 3463337..3463669 1 NC_015945.1 hypothetical protein 3463669 11056004 Murru_3152 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789595.1 3463337 D 886377 CDS YP_004789596.1 344204453 11056005 3463767..3464684 1 NC_015945.1 PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: fbc:FB2170_11591 hypothetical protein; PFAM: Drug/metabolite transporter; SPTR: Putative uncharacterized protein; hypothetical protein 3464684 11056005 Murru_3153 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789596.1 3463767 D 886377 CDS YP_004789597.1 344204454 11056006 3464753..3465307 1 NC_015945.1 KEGG: zpr:ZPR_2689 secreted protein; SPTR: Putative uncharacterized protein; hypothetical protein 3465307 11056006 Murru_3154 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789597.1 3464753 D 886377 CDS YP_004789598.1 344204455 11056007 3465684..3466886 1 NC_015945.1 COGs: COG2133 Glucose/sorbosone dehydrogenase; KEGG: rbi:RB2501_14849 L-sorbosone dehydrogenase; SPTR: L-sorbosone dehydrogenase; L-sorbosone dehydrogenase 3466886 11056007 Murru_3155 Muricauda ruestringensis DSM 13258 L-sorbosone dehydrogenase YP_004789598.1 3465684 D 886377 CDS YP_004789599.1 344204456 11056009 complement(3467086..3467805) 1 NC_015945.1 PFAM: Phage protein Gp37/Gp68; COGs: COG4422 Bacteriophage protein gp37; InterPro IPR011101; KEGG: chu:CHU_3680 ABC transporter; PFAM: Phage Gp37Gp68; SPTR: Putative uncharacterized protein; manually curated; Gp37Gp68 family protein 3467805 11056009 Murru_3157 Muricauda ruestringensis DSM 13258 Gp37Gp68 family protein YP_004789599.1 3467086 R 886377 CDS YP_004789600.1 344204457 11056010 complement(3467808..3468902) 1 NC_015945.1 KEGG: chu:CHU_3679 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3468902 11056010 Murru_3158 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789600.1 3467808 R 886377 CDS YP_004789601.1 344204458 11056011 complement(3468974..3469750) 1 NC_015945.1 TIGRFAM: probable DNA metabolism protein; KEGG: gfo:GFO_0357 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3469750 11056011 Murru_3159 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789601.1 3468974 R 886377 CDS YP_004789602.1 344204459 11056012 3470025..3470783 1 NC_015945.1 PFAM: Helix-turn-helix; Peptidase S24-like; InterPro IPR001387:IPR019759; KEGG: fbc:FB2170_12111 transcriptional regulator; PFAM: Helix-turn-helix type 3; Peptidase S24/S26A/S26B, conserved region; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, putative; helix-turn-helix domain-containing protein 3470783 11056012 Murru_3160 Muricauda ruestringensis DSM 13258 helix-turn-helix domain-containing protein YP_004789602.1 3470025 D 886377 CDS YP_004789603.1 344204460 11056013 complement(3470785..3471780) 1 NC_015945.1 PFAM: SMP-30/Gluconolaconase/LRE-like region; COGs: COG3386 Gluconolactonase; InterPro IPR013658; KEGG: dfe:Dfer_2426 gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE-like region; PRIAM: Gluconolactonase; SPTR: Gluconolactonase; gluconolactonase 3471780 11056013 Murru_3161 Muricauda ruestringensis DSM 13258 gluconolactonase YP_004789603.1 3470785 R 886377 CDS YP_004789604.1 344204461 11056014 complement(3471829..3472749) 1 NC_015945.1 PFAM: Prokaryotic glutathione synthetase, ATP-grasp domain; KEGG: lpp:lpp1627 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3472749 11056014 Murru_3162 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789604.1 3471829 R 886377 CDS YP_004789605.1 344204462 11056015 complement(3472761..3474443) 1 NC_015945.1 PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase; COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: rbi:RB2501_14579 gamma-glutamyltranspeptidase; PFAM: Gamma-glutamyltranspeptidase; PRIAM: Gamma-glutamyltransferase; SPTR: Gamma-glutamyltranspeptidase; TIGRFAM: Gamma-glutamyltranspeptidase; gamma-glutamyltransferase 3474443 11056015 Murru_3163 Muricauda ruestringensis DSM 13258 gamma-glutamyltransferase YP_004789605.1 3472761 R 886377 CDS YP_004789606.1 344204463 11056016 complement(3474431..3475024) 1 NC_015945.1 PFAM: Protein of unknown function, DUF479; COGs: COG3124 conserved hypothetical protein; InterPro IPR007431; KEGG: fbc:FB2170_12051 hypothetical protein; PFAM: Acyl carrier protein phosphodiesterase; SPTR: Putative uncharacterized protein; acyl carrier protein phosphodiesterase 3475024 11056016 Murru_3164 Muricauda ruestringensis DSM 13258 acyl carrier protein phosphodiesterase YP_004789606.1 3474431 R 886377 CDS YP_004789607.1 344204464 11056017 3475116..3476504 1 NC_015945.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase; COGs: COG1109 Phosphomannomutase; InterPro IPR005844:IPR005845:IPR005846:IPR005843; KEGG: rbi:RB2501_14589 phosphoglucomutase/phosphomannomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; PRIAM: Phosphoglucosamine mutase; SPTR: Phosphomannomutase; phosphoglucosamine mutase 3476504 11056017 Murru_3165 Muricauda ruestringensis DSM 13258 phosphoglucosamine mutase YP_004789607.1 3475116 D 886377 CDS YP_004789608.1 344204465 11056018 complement(3476501..3477418) 1 NC_015945.1 PFAM: Bacterial lipid A biosynthesis acyltransferase; COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: rbi:RB2501_14594 putative LipD A biosynthesis related exported protein; PFAM: Bacterial lipid A biosynthesis acyltransferase; SPTR: Putative lipd A biosynthesis related exported protein; lipid A biosynthesis acyltransferase 3477418 11056018 Murru_3166 Muricauda ruestringensis DSM 13258 lipid A biosynthesis acyltransferase YP_004789608.1 3476501 R 886377 CDS YP_004789609.1 344204466 11056019 3477472..3478122 1 NC_015945.1 PFAM: Rhomboid family; COGs: COG0705 membrane protein; InterPro IPR022764; KEGG: fbc:FB2170_12031 hypothetical protein; PFAM: Peptidase S54, rhomboid domain; SPTR: Putative uncharacterized protein; peptidase S54, rhomboid domain-containing protein 3478122 11056019 Murru_3167 Muricauda ruestringensis DSM 13258 peptidase S54, rhomboid domain-containing protein YP_004789609.1 3477472 D 886377 CDS YP_004789610.1 344204467 11056020 complement(3478600..3479721) 1 NC_015945.1 PFAM: AhpC/TSA family; InterPro IPR000866; KEGG: rbi:RB2501_14609 putative lipoprotein/thioderoxin; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Putative lipoprotein/thioderoxin; alkyl hydroperoxide reductase 3479721 11056020 Murru_3168 Muricauda ruestringensis DSM 13258 alkyl hydroperoxide reductase YP_004789610.1 3478600 R 886377 CDS YP_004789611.1 344204468 11056021 complement(3479821..3480321) 1 NC_015945.1 KEGG: rbi:RB2501_14614 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3480321 11056021 Murru_3169 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789611.1 3479821 R 886377 CDS YP_004789612.1 344204469 11056022 3480411..3483326 1 NC_015945.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; COGs: COG0247 Fe-S oxidoreductase; InterPro IPR006094:IPR004113; KEGG: fbc:FB2170_12011 FAD linked oxidase-like protein; PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; PRIAM: D-lactate dehydrogenase (cytochrome); SPTR: FAD linked oxidase-like protein; D-lactate dehydrogenase 3483326 11056022 Murru_3170 Muricauda ruestringensis DSM 13258 D-lactate dehydrogenase YP_004789612.1 3480411 D 886377 CDS YP_004789613.1 344204470 11056023 complement(3483297..3484217) 1 NC_015945.1 COGs: COG2908 conserved hypothetical protein; InterPro IPR004843; KEGG: fjo:Fjoh_4577 metallophosphoesterase; PFAM: Metallo-dependent phosphatase; SPTR: Fused predicted transporter subunit of ABC superfamily: ATP-binding component; metallophosphoesterase 3484217 11056023 Murru_3171 Muricauda ruestringensis DSM 13258 metallophosphoesterase YP_004789613.1 3483297 R 886377 CDS YP_004789614.1 344204471 11056024 3484572..3485636 1 NC_015945.1 PFAM: Chorismate synthase; TIGRFAM: chorismate synthase; COGs: COG0082 Chorismate synthase; InterPro IPR000453; KEGG: fbc:FB2170_12006 chorismate synthase; PFAM: Chorismate synthase; PRIAM: Chorismate synthase; SPTR: Chorismate synthase; TIGRFAM: Chorismate synthase; chorismate synthase 3485636 11056024 Murru_3172 Muricauda ruestringensis DSM 13258 chorismate synthase YP_004789614.1 3484572 D 886377 CDS YP_004789615.1 344204472 11056025 3485694..3487019 1 NC_015945.1 PFAM: Sodium:dicarboxylate symporter family; COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991; KEGG: rbi:RB2501_14634 proton/glutamate symporter; PFAM: Sodium:dicarboxylate symporter; SPTR: Proton/glutamate symporter; sodium:dicarboxylate symporter 3487019 11056025 Murru_3173 Muricauda ruestringensis DSM 13258 sodium:dicarboxylate symporter YP_004789615.1 3485694 D 886377 CDS YP_004789616.1 344204473 11056026 complement(3487184..3489235) 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; conserved hypothetical protein; InterPro IPR011935:IPR012910; KEGG: fbc:FB2170_11971 putative TonB-linked outer membrane protein; PFAM: TonB-dependent receptor, plug; SPTR: Putative TonB-linked outer membrane protein; TIGRFAM: Conserved hypothetical protein CHP02231; hypothetical protein 3489235 11056026 Murru_3174 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789616.1 3487184 R 886377 CDS YP_004789617.1 344204474 11056027 complement(3489347..3489760) 1 NC_015945.1 PFAM: Protein of unknown function, DUF393; COGs: COG3011 conserved hypothetical protein; InterPro IPR007263; KEGG: gfo:GFO_1625 hypothetical protein; PFAM: Putative thiol-disulphide oxidoreductase DCC; SPTR: Protein containing DUF393; thiol-disulfide oxidoreductase DCC 3489760 11056027 Murru_3175 Muricauda ruestringensis DSM 13258 thiol-disulfide oxidoreductase DCC YP_004789617.1 3489347 R 886377 CDS YP_004789618.1 344204475 11056028 complement(3489770..3490054) 1 NC_015945.1 PFAM: Acetyltransferase (GNAT) family; COGs: COG2388 acetyltransferase; KEGG: gfo:GFO_1141 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3490054 11056028 Murru_3176 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789618.1 3489770 R 886377 CDS YP_004789619.1 344204476 11056029 complement(3490061..3490267) 1 NC_015945.1 PFAM: Protein of unknown function (DUF1271); InterPro IPR010693; KEGG: bfr:BF1560 hypothetical protein; PFAM: Ferredoxin soy-like; SPTR: Putative uncharacterized protein; hypothetical protein 3490267 11056029 Murru_3177 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789619.1 3490061 R 886377 CDS YP_004789620.1 344204477 11056030 complement(3490357..3491226) 1 NC_015945.1 KEGG: mtt:Ftrac_1334 hypothetical protein; SPTR: TPR repeat-containing protein; hypothetical protein 3491226 11056030 Murru_3178 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789620.1 3490357 R 886377 CDS YP_004789621.1 344204478 11056031 complement(3491223..3491735) 1 NC_015945.1 KEGG: mtt:Ftrac_1335 hypothetical protein; hypothetical protein 3491735 11056031 Murru_3179 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789621.1 3491223 R 886377 CDS YP_004789622.1 344204479 11056032 complement(3492125..3493582) 1 NC_015945.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: rbi:RB2501_09095 putative dehydrogenase-like protein; PFAM: Oxidoreductase, N-terminal; SPTR: Putative dehydrogenase-like protein; oxidoreductase domain-containing protein 3493582 11056032 Murru_3180 Muricauda ruestringensis DSM 13258 oxidoreductase domain-containing protein YP_004789622.1 3492125 R 886377 CDS YP_004789623.1 344204480 11056033 complement(3493944..3494609) 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 3494609 11056033 Murru_3181 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789623.1 3493944 R 886377 CDS YP_004789624.1 344204481 11056034 3494934..3495203 1 NC_015945.1 hypothetical protein 3495203 11056034 Murru_3182 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789624.1 3494934 D 886377 CDS YP_004789625.1 344204482 11056035 complement(3495329..3495967) 1 NC_015945.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: fbc:FB2170_11456 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulatory protein; GntR family transcriptional regulator 3495967 11056035 Murru_3183 Muricauda ruestringensis DSM 13258 GntR family transcriptional regulator YP_004789625.1 3495329 R 886377 CDS YP_004789626.1 344204483 11056036 complement(3496019..3496495) 1 NC_015945.1 KEGG: rbi:RB2501_10637 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3496495 11056036 Murru_3184 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789626.1 3496019 R 886377 CDS YP_004789627.1 344204484 11056037 3496681..3497469 1 NC_015945.1 KEGG: rbi:RB2501_14899 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3497469 11056037 Murru_3185 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789627.1 3496681 D 886377 CDS YP_004789628.1 344204485 11056038 3497702..3499072 1 NC_015945.1 PFAM: Aldehyde dehydrogenase family; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: fbc:FB2170_12341 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; SPTR: Aldehyde dehydrogenase; aldehyde dehydrogenase 3499072 11056038 Murru_3186 Muricauda ruestringensis DSM 13258 aldehyde dehydrogenase YP_004789628.1 3497702 D 886377 CDS YP_004789629.1 344204486 11056039 3499170..3500024 1 NC_015945.1 PFAM: Universal stress protein family; SPTR: Putative uncharacterized protein; hypothetical protein 3500024 11056039 Murru_3187 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789629.1 3499170 D 886377 CDS YP_004789630.1 344204487 11056040 complement(3500283..3502043) 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 3502043 11056040 Murru_3188 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789630.1 3500283 R 886377 CDS YP_004789631.1 344204488 11056041 complement(3502057..3503787) 1 NC_015945.1 KEGG: cyc:PCC7424_4176 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3503787 11056041 Murru_3189 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789631.1 3502057 R 886377 CDS YP_004789632.1 344204489 11056042 complement(3504022..3504231) 1 NC_015945.1 PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: chu:CHU_2935 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; helix-turn-helix domain-containing protein 3504231 11056042 Murru_3190 Muricauda ruestringensis DSM 13258 helix-turn-helix domain-containing protein YP_004789632.1 3504022 R 886377 CDS YP_004789633.1 344204490 11056043 3504423..3504650 1 NC_015945.1 hypothetical protein 3504650 11056043 Murru_3191 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789633.1 3504423 D 886377 CDS YP_004789634.1 344204491 11056044 complement(3504795..3505223) 1 NC_015945.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; COGs: COG1047 FKBP-type peptidyl-prolyl cis-trans isomerase 2; InterPro IPR001179; KEGG: cat:CA2559_12583 peptidyl-prolyl cis-trans isomerase, FKBP-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; FKBP-type peptidylprolyl isomerase 3505223 11056044 Murru_3192 Muricauda ruestringensis DSM 13258 FKBP-type peptidylprolyl isomerase YP_004789634.1 3504795 R 886377 CDS YP_004789635.1 344204492 11056045 complement(3505349..3506506) 1 NC_015945.1 PFAM: Endonuclease/Exonuclease/phosphatase family; InterPro IPR005135; KEGG: mmr:Mmar10_0829 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase 3506506 11056045 Murru_3193 Muricauda ruestringensis DSM 13258 endonuclease/exonuclease/phosphatase YP_004789635.1 3505349 R 886377 CDS YP_004789636.1 344204493 11056046 3506902..3509514 1 NC_015945.1 PFAM: BNR/Asp-box repeat; KEGG: cpy:Cphy_1688 two component regulator propeller domain-containing protein; SPTR: Two component regulator propeller domain protein; hypothetical protein 3509514 11056046 Murru_3194 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789636.1 3506902 D 886377 CDS YP_004789637.1 344204494 11056047 3509511..3510206 1 NC_015945.1 KEGG: rbi:RB2501_09315 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3510206 11056047 Murru_3195 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789637.1 3509511 D 886377 CDS YP_004789638.1 344204495 11056048 3510513..3511571 1 NC_015945.1 KEGG: msv:Mesil_1976 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3511571 11056048 Murru_3196 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789638.1 3510513 D 886377 CDS YP_004789639.1 344204496 11056049 complement(3511733..3512380) 1 NC_015945.1 PFAM: Tetratricopeptide repeat; InterPro IPR001440:IPR019734; KEGG: mtt:Ftrac_1158 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein; hypothetical protein 3512380 11056049 Murru_3197 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789639.1 3511733 R 886377 CDS YP_004789640.1 344204497 11056050 complement(3512384..3512881) 1 NC_015945.1 KEGG: mtt:Ftrac_1335 hypothetical protein; hypothetical protein 3512881 11056050 Murru_3198 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789640.1 3512384 R 886377 CDS YP_004789641.1 344204498 11056051 complement(3512947..3513570) 1 NC_015945.1 PFAM: Domain of unknown function (DU1801); COGs: COG4430 conserved hypothetical protein; InterPro IPR014922; KEGG: gtn:GTNG_1580 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: Putative uncharacterized protein; hypothetical protein 3513570 11056051 Murru_3199 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789641.1 3512947 R 886377 CDS YP_004789642.1 344204499 11056052 complement(3513567..3513920) 1 NC_015945.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: nml:Namu_5280 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxylase; bleomycin resistance protein 3513920 11056052 Murru_3200 Muricauda ruestringensis DSM 13258 bleomycin resistance protein YP_004789642.1 3513567 R 886377 CDS YP_004789643.1 344204500 11056053 complement(3513941..3514522) 1 NC_015945.1 PFAM: Domain of unknown function (DU1801); COGs: COG4430 conserved hypothetical protein; InterPro IPR014922; KEGG: rbi:RB2501_13014 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: Putative uncharacterized protein; hypothetical protein 3514522 11056053 Murru_3201 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789643.1 3513941 R 886377 CDS YP_004789644.1 344204501 11056054 complement(3514527..3514913) 1 NC_015945.1 KEGG: fjo:Fjoh_2827 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3514913 11056054 Murru_3202 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789644.1 3514527 R 886377 CDS YP_004789645.1 344204502 11056055 complement(3514900..3515085) 1 NC_015945.1 hypothetical protein 3515085 11056055 Murru_3203 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789645.1 3514900 R 886377 CDS YP_004789646.1 344204503 11056056 complement(3515200..3515661) 1 NC_015945.1 PFAM: Activator of Hsp90 ATPase homolog 1-like protein; COGs: COG3832 conserved hypothetical protein; InterPro IPR013538; KEGG: chu:CHU_2913 hypothetical protein; PFAM: Activator of Hsp90 ATPase homologue 1-like; SPTR: Putative uncharacterized protein; Activator of Hsp90 ATPase 1 family protein 3515661 11056056 Murru_3204 Muricauda ruestringensis DSM 13258 Activator of Hsp90 ATPase 1 family protein YP_004789646.1 3515200 R 886377 CDS YP_004789647.1 344204504 11056057 complement(3515663..3515986) 1 NC_015945.1 PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: fjo:Fjoh_2829 regulatory protein, ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family; regulatory protein ArsR 3515986 11056057 Murru_3205 Muricauda ruestringensis DSM 13258 regulatory protein ArsR YP_004789647.1 3515663 R 886377 CDS YP_004789648.1 344204505 11056058 3516858..3519053 1 NC_015945.1 PFAM: PA domain; Peptidase family M28; Transferrin receptor-like dimerisation domain; COGs: COG2234 aminopeptidase; InterPro IPR003137:IPR007484; KEGG: rbi:RB2501_12577 hypothetical protein; PFAM: Peptidase M28; Protease-associated domain, PA; PRIAM: Glutamate carboxypeptidase II; SPTR: Putative uncharacterized protein; glutamate carboxypeptidase II 3519053 11056058 Murru_3206 Muricauda ruestringensis DSM 13258 glutamate carboxypeptidase II YP_004789648.1 3516858 D 886377 CDS YP_004789649.1 344204506 11056059 3519190..3519810 1 NC_015945.1 PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: aas:Aasi_0101 DNA repair protein RadC; PFAM: Uncharacterised protein family UPF0758; SPTR: DNA repair protein; DNA repair protein RadC 3519810 11056059 Murru_3207 Muricauda ruestringensis DSM 13258 DNA repair protein RadC YP_004789649.1 3519190 D 886377 CDS YP_004789650.1 344204507 11056060 complement(3519822..3521090) 1 NC_015945.1 SPTR: Putative uncharacterized protein; hypothetical protein 3521090 11056060 Murru_3208 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789650.1 3519822 R 886377 CDS YP_004789651.1 344204508 11056061 complement(3521098..3523332) 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594; KEGG: amr:AM1_A0018 sensor histidine kinase, putative; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Putative uncharacterized protein; histidine kinase 3523332 11056061 Murru_3209 Muricauda ruestringensis DSM 13258 histidine kinase YP_004789651.1 3521098 R 886377 CDS YP_004789652.1 344204509 11056062 complement(3523332..3524636) 1 NC_015945.1 PFAM: DNA methylase; InterPro IPR002941; KEGG: bca:BCE_5606 modification methylase, putative; PFAM: DNA methylase N-4/N-6; SPTR: Putative modification methylase; DNA methylase N-4/N-6 domain-containing protein 3524636 11056062 Murru_3210 Muricauda ruestringensis DSM 13258 DNA methylase N-4/N-6 domain-containing protein YP_004789652.1 3523332 R 886377 CDS YP_004789653.1 344204510 11056063 3524761..3524898 1 NC_015945.1 hypothetical protein 3524898 11056063 Murru_3211 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789653.1 3524761 D 886377 CDS YP_004789654.1 344204511 11056064 complement(3524924..3525304) 1 NC_015945.1 PFAM: Domain of unknown function DUF302; InterPro IPR005180; PFAM: Domain of unknown function DUF302; hypothetical protein 3525304 11056064 Murru_3212 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789654.1 3524924 R 886377 CDS YP_004789655.1 344204512 11056065 complement(3525317..3526198) 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: cpi:Cpin_4620 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Helix-turn-helix, AraC domain protein; AraC family transcriptional regulator 3526198 11056065 Murru_3213 Muricauda ruestringensis DSM 13258 AraC family transcriptional regulator YP_004789655.1 3525317 R 886377 CDS YP_004789656.1 344204513 11056066 complement(3526430..3526846) 1 NC_015945.1 PFAM: Protein of unknown function (DUF1348); COGs: COG3558 conserved hypothetical protein; InterPro IPR009783; KEGG: cpi:Cpin_7146 protein of unknown function DUF1348; PFAM: Protein of unknown function DUF1348; SPTR: Putative uncharacterized protein; hypothetical protein 3526846 11056066 Murru_3214 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789656.1 3526430 R 886377 CDS YP_004789657.1 344204514 11056067 complement(3526883..3527086) 1 NC_015945.1 hypothetical protein 3527086 11056067 Murru_3215 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789657.1 3526883 R 886377 CDS YP_004789658.1 344204515 11056068 complement(3527119..3527658) 1 NC_015945.1 PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain; COGs: COG2128 conserved hypothetical protein; InterPro IPR003779; KEGG: psl:Psta_0275 uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; SPTR: Uncharacterized peroxidase-related enzyme; carboxymuconolactone decarboxylase 3527658 11056068 Murru_3216 Muricauda ruestringensis DSM 13258 carboxymuconolactone decarboxylase YP_004789658.1 3527119 R 886377 CDS YP_004789659.1 344204516 11056070 complement(3528439..3528945) 1 NC_015945.1 hypothetical protein 3528945 11056070 Murru_3218 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789659.1 3528439 R 886377 CDS YP_004789660.1 344204517 11056071 3529001..3531862 1 NC_015945.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR004602:IPR003439; KEGG: fbc:FB2170_12131 excinuclease ABC subunit A; PFAM: ABC transporter-like; SPTR: Excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit; excinuclease ABC subunit A 3531862 11056071 Murru_3219 Muricauda ruestringensis DSM 13258 excinuclease ABC subunit A YP_004789660.1 3529001 D 886377 CDS YP_004789661.1 344204518 11056072 3531877..3532569 1 NC_015945.1 PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein; COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: fbc:FB2170_12136 hypothetical protein; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; SPTR: Putative uncharacterized protein; TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; hypothetical protein 3532569 11056072 Murru_3220 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789661.1 3531877 D 886377 CDS YP_004789662.1 344204519 11056073 3532529..3535414 1 NC_015945.1 KEGG: rbi:RB2501_14549 aminopeptidase N; SPTR: Aminopeptidase N; aminopeptidase N 3535414 11056073 Murru_3221 Muricauda ruestringensis DSM 13258 aminopeptidase N YP_004789662.1 3532529 D 886377 CDS YP_004789663.1 344204520 11056074 3535572..3537980 1 NC_015945.1 PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR001017:IPR005475:IPR005476; KEGG: fbc:FB2170_12146 pyruvate dehydrogenase E1 subunit beta; PFAM: Transketolase, C-terminal; Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; SMART: Transketolase-like, pyrimidine-binding domain; SPTR: Pyruvate dehydrogenase E1 beta subunit; transketolase 3537980 11056074 Murru_3222 Muricauda ruestringensis DSM 13258 transketolase YP_004789663.1 3535572 D 886377 CDS YP_004789664.1 344204521 11056075 3538090..3538467 1 NC_015945.1 PFAM: DoxX; COGs: COG2259 membrane protein; InterPro IPR011637; KEGG: fbc:FB2170_12156 hypothetical protein; PFAM: Uncharacterised protein family YphA; SPTR: Putative uncharacterized protein; DoxX family protein 3538467 11056075 Murru_3223 Muricauda ruestringensis DSM 13258 DoxX family protein YP_004789664.1 3538090 D 886377 CDS YP_004789665.1 344204522 11056076 complement(3538470..3539471) 1 NC_015945.1 PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR005790:IPR010372; KEGG: fbc:FB2170_12161 hypothetical protein; PFAM: DNA polymerase III, delta; SPTR: Putative uncharacterized protein; TIGRFAM: DNA polymerase III, delta subunit; DNA polymerase III subunit delta 3539471 11056076 Murru_3224 Muricauda ruestringensis DSM 13258 DNA polymerase III subunit delta YP_004789665.1 3538470 R 886377 CDS YP_004789666.1 344204523 11056077 3539498..3539944 1 NC_015945.1 PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); InterPro IPR007409; KEGG: fbc:FB2170_12166 hypothetical protein; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; SPTR: Putative uncharacterized protein; Restriction endonuclease, type I, EcoRI, R subunit/Type III 3539944 11056077 Murru_3225 Muricauda ruestringensis DSM 13258 Restriction endonuclease, type I, EcoRI, R subunit/Type III YP_004789666.1 3539498 D 886377 CDS YP_004789667.1 344204524 11056078 3539957..3540958 1 NC_015945.1 PFAM: Glycosyl transferase family 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: fbc:FB2170_12171 glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyltransferase; family 2 glycosyl transferase 3540958 11056078 Murru_3226 Muricauda ruestringensis DSM 13258 family 2 glycosyl transferase YP_004789667.1 3539957 D 886377 CDS YP_004789668.1 344204525 11056079 3541055..3541927 1 NC_015945.1 PFAM: OmpA family; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: rbi:RB2501_14509 putative flagellar motor protein MotB; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: Putative flagellar motor protein MotB; OmpA/MotB domain-containing protein 3541927 11056079 Murru_3227 Muricauda ruestringensis DSM 13258 OmpA/MotB domain-containing protein YP_004789668.1 3541055 D 886377 CDS YP_004789669.1 344204526 11056080 complement(3541981..3542601) 1 NC_015945.1 PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; COGs: COG0009 Putative translation factor (SUA5); InterPro IPR004388:IPR006070; KEGG: rbi:RB2501_14504 putative SUA5/YciO/YrdC family protein; PFAM: Sua5/YciO/YrdC, N-terminal; SPTR: Putative Sua5/yciO/yrdC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; Sua5/YciO/YrdC/YwlC family protein 3542601 11056080 Murru_3228 Muricauda ruestringensis DSM 13258 Sua5/YciO/YrdC/YwlC family protein YP_004789669.1 3541981 R 886377 CDS YP_004789670.1 344204527 11056081 3542726..3543511 1 NC_015945.1 hypothetical protein 3543511 11056081 Murru_3229 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789670.1 3542726 D 886377 CDS YP_004789671.1 344204528 11056082 complement(3543508..3545718) 1 NC_015945.1 KEGG: gau:GAU_2748 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3545718 11056082 Murru_3230 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789671.1 3543508 R 886377 CDS YP_004789672.1 344204529 11056083 complement(3545849..3546421) 1 NC_015945.1 KEGG: pru:PRU_0453 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3546421 11056083 Murru_3231 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789672.1 3545849 R 886377 CDS YP_004789673.1 344204530 11056084 complement(3546831..3549161) 1 NC_015945.1 PFAM: UvrD/REP helicase; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: fbc:FB2170_12186 putative helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: Putative helicase; UvrD/REP helicase 3549161 11056084 Murru_3232 Muricauda ruestringensis DSM 13258 UvrD/REP helicase YP_004789673.1 3546831 R 886377 CDS YP_004789674.1 344204531 11056085 3549303..3549842 1 NC_015945.1 PFAM: DsrE/DsrF-like family; KEGG: fbc:FB2170_12191 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3549842 11056085 Murru_3233 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789674.1 3549303 D 886377 CDS YP_004789675.1 344204532 11056086 3549860..3551146 1 NC_015945.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168:IPR002933:IPR011650; KEGG: rbi:RB2501_14489 peptidase M20D, amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; PRIAM: N-acetyldiaminopimelate deacetylase; SPTR: Peptidase M20D, amidohydrolase; TIGRFAM: Peptidase M20D, amidohydrolase; amidohydrolase 3551146 11056086 Murru_3234 Muricauda ruestringensis DSM 13258 amidohydrolase YP_004789675.1 3549860 D 886377 CDS YP_004789676.1 344204533 11056087 complement(3551176..3552162) 1 NC_015945.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: zpr:ZPR_4669 transposase IS116/IS110/IS902 family; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; SPTR: Transposase; transposase IS116/IS110/IS902 family protein 3552162 11056087 Murru_3235 Muricauda ruestringensis DSM 13258 transposase IS116/IS110/IS902 family protein YP_004789676.1 3551176 R 886377 CDS YP_004789677.1 344204534 11056088 3552411..3552551 1 NC_015945.1 hypothetical protein 3552551 11056088 Murru_3236 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789677.1 3552411 D 886377 CDS YP_004789678.1 344204535 11056089 3552557..3554149 1 NC_015945.1 PFAM: Conserved region in glutamate synthase; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR002932; KEGG: fbc:FB2170_12201 glutamate synthase; PFAM: Glutamate synthase, central-C; PRIAM: Glutamate synthase (NADPH); SPTR: Glutamate synthase; glutamate synthase 3554149 11056089 Murru_3237 Muricauda ruestringensis DSM 13258 glutamate synthase YP_004789678.1 3552557 D 886377 CDS YP_004789679.1 344204536 11056090 3554169..3554942 1 NC_015945.1 KEGG: fbc:FB2170_12206 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3554942 11056090 Murru_3238 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789679.1 3554169 D 886377 CDS YP_004789680.1 344204537 11056091 3555020..3555541 1 NC_015945.1 KEGG: fbc:FB2170_12211 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3555541 11056091 Murru_3239 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789680.1 3555020 D 886377 CDS YP_004789681.1 344204538 11056092 complement(3555944..3556858) 1 NC_015945.1 PFAM: Patatin-like phospholipase; InterPro IPR002641; KEGG: fbc:FB2170_12216 hypothetical protein; PFAM: Patatin/Phospholipase A2-related; SPTR: Putative uncharacterized protein; patatin 3556858 11056092 Murru_3240 Muricauda ruestringensis DSM 13258 patatin YP_004789681.1 3555944 R 886377 CDS YP_004789682.1 344204539 11056093 complement(3556855..3558945) 1 NC_015945.1 PFAM: Peptidase family M1; COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: fbc:FB2170_12221 aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; PRIAM: Membrane alanyl aminopeptidase; SPTR: Aminopeptidase; membrane alanyl aminopeptidase 3558945 11056093 Murru_3241 Muricauda ruestringensis DSM 13258 membrane alanyl aminopeptidase YP_004789682.1 3556855 R 886377 CDS YP_004789683.1 344204540 11056094 3558992..3561097 1 NC_015945.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; OB-fold nucleic acid binding domain; TIGRFAM: ATP-dependent DNA helicase RecG; COGs: COG1200 RecG-like helicase; InterProIPR004609:IPR004365:IPR011545:IPR001650:IPR 014001; KEGG: fbc:FB2170_12226 ATP-dependent DNA helicase RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent DNA helicase RecG; TIGRFAM: DNA helicase, ATP-dependent, RecG; ATP-dependent DNA helicase RecG 3561097 11056094 Murru_3242 Muricauda ruestringensis DSM 13258 ATP-dependent DNA helicase RecG YP_004789683.1 3558992 D 886377 CDS YP_004789684.1 344204541 11056095 3561298..3562710 1 NC_015945.1 PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; COGs: COG0065 3-isopropylmalate dehydratase large subunit; HAMAP: 3-isopropylmalate dehydratase, large subunit; InterPro IPR004430:IPR001030; KEGG: rbi:RB2501_14454 isopropylmalate isomerase large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; SPTR: 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase large subunit 3562710 11056095 Murru_3243 Muricauda ruestringensis DSM 13258 3-isopropylmalate dehydratase large subunit YP_004789684.1 3561298 D 886377 CDS YP_004789685.1 344204542 11056096 3562812..3563408 1 NC_015945.1 PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; COGs: COG0066 3-isopropylmalate dehydratase small subunit; InterPro IPR004431:IPR000573; KEGG: fbc:FB2170_12251 3-isopropylmalate dehydratase small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel; SPTR: 3-isopropylmalate dehydratase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; 3-isopropylmalate dehydratase small subunit 3563408 11056096 Murru_3244 Muricauda ruestringensis DSM 13258 3-isopropylmalate dehydratase small subunit YP_004789685.1 3562812 D 886377 CDS YP_004789686.1 344204543 11056097 3563439..3564956 1 NC_015945.1 PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891:IPR013709; KEGG: fbc:FB2170_12256 putative alpha-isopropylmalate synthase 2; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; PRIAM: (R)-citramalate synthase; SMART: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; SPTR: Putative alpha-isopropylmalate synthase 2; (R)-citramalate synthase 3564956 11056097 Murru_3245 Muricauda ruestringensis DSM 13258 (R)-citramalate synthase YP_004789686.1 3563439 D 886377 CDS YP_004789687.1 344204544 11056098 3565000..3566058 1 NC_015945.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; HAMAP: Isopropylmalate dehydrogenase; InterPro IPR004429:IPR001804; KEGG: phe:Phep_3428 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; PRIAM: 3-isopropylmalate dehydrogenase; SPTR: 3-isopropylmalate dehydrogenase; TIGRFAM: Isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 3566058 11056098 Murru_3246 Muricauda ruestringensis DSM 13258 3-isopropylmalate dehydrogenase YP_004789687.1 3565000 D 886377 CDS YP_004789688.1 344204545 11056099 complement(3566452..3568044) 1 NC_015945.1 PFAM: Aldehyde dehydrogenase family; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: fbc:FB2170_12276 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)); SPTR: Aldehyde dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 3568044 11056099 Murru_3247 Muricauda ruestringensis DSM 13258 glyceraldehyde-3-phosphate dehydrogenase YP_004789688.1 3566452 R 886377 CDS YP_004789689.1 344204546 11056100 complement(3568206..3569471) 1 NC_015945.1 PFAM: C-terminal regulatory domain of Threonine dehydratase; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine ammonia-lyase, biosynthetic, long form; threonine dehydratase; COGs: COG1171 Threonine dehydratase; InterPro IPR011820:IPR001926:IPR001721; KEGG: fbc:FB2170_12281 threonine dehydratase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Threonine dehydratase, C-terminal; SPTR: Threonine dehydratase; TIGRFAM: Threonine dehydratase; threonine dehydratase 3569471 11056100 Murru_3248 Muricauda ruestringensis DSM 13258 threonine dehydratase YP_004789689.1 3568206 R 886377 CDS YP_004789690.1 344204547 11056101 complement(3569490..3570965) 1 NC_015945.1 PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase; COGs: COG0059 Ketol-acid reductoisomerase; InterPro IPR013023:IPR013116:IPR000506; KEGG: fbc:FB2170_12286 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase C-terminal; Acetohydroxy acid isomeroreductase, catalytic; PRIAM: Ketol-acid reductoisomerase; SPTR: Ketol-acid reductoisomerase; TIGRFAM: Acetohydroxy acid isomeroreductase; ketol-acid reductoisomerase 3570965 11056101 Murru_3249 Muricauda ruestringensis DSM 13258 ketol-acid reductoisomerase YP_004789690.1 3569490 R 886377 CDS YP_004789691.1 344204548 11056102 complement(3570990..3571517) 1 NC_015945.1 PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit; COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR004789:IPR002912:IPR019455; KEGG: rbi:RB2501_14424 putative acetohydroxyacid synthase small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT; SPTR: Putative acetohydroxyacid synthase small subunit; TIGRFAM: Acetolactate synthase, small subunit; acetolactate synthase small subunit 3571517 11056102 Murru_3250 Muricauda ruestringensis DSM 13258 acetolactate synthase small subunit YP_004789691.1 3570990 R 886377 CDS YP_004789692.1 344204549 11056103 complement(3571596..3573329) 1 NC_015945.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR012846:IPR012001:IPR012000:IPR011766; KEGG: fbc:FB2170_12296 acetolactate synthase large subunit; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: Acetolactate synthase; SPTR: Acetolactate synthase large subunit; TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; acetolactate synthase large subunit 3573329 11056103 Murru_3251 Muricauda ruestringensis DSM 13258 acetolactate synthase large subunit YP_004789692.1 3571596 R 886377 CDS YP_004789693.1 344204550 11056104 complement(3573366..3575042) 1 NC_015945.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; HAMAP: Dihydroxy-acid dehydratase; InterPro IPR004404:IPR000581; KEGG: rbi:RB2501_14414 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: Dihydroxy-acid dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; dihydroxy-acid dehydratase 3575042 11056104 Murru_3252 Muricauda ruestringensis DSM 13258 dihydroxy-acid dehydratase YP_004789693.1 3573366 R 886377 CDS YP_004789694.1 344204551 11056105 complement(3575528..3576460) 1 NC_015945.1 KEGG: gfo:GFO_0858 secreted protein; SPTR: Putative uncharacterized protein; hypothetical protein 3576460 11056105 Murru_3253 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789694.1 3575528 R 886377 CDS YP_004789695.1 344204552 11056106 complement(3576672..3577511) 1 NC_015945.1 PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain; COGs: COG1984 Allophanate hydrolase subunit 2; InterPro IPR003778; KEGG: fbc:FB2170_12351 allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2; SPTR: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 2 3577511 11056106 Murru_3254 Muricauda ruestringensis DSM 13258 Allophanate hydrolase subunit 2 YP_004789695.1 3576672 R 886377 CDS YP_004789696.1 344204553 11056107 complement(3577504..3578238) 1 NC_015945.1 PFAM: Allophanate hydrolase subunit 1; TIGRFAM: TIGR00370 family protein; COGs: COG2049 Allophanate hydrolase subunit 1; InterPro IPR010016:IPR003833; KEGG: fbc:FB2170_12356 hypothetical protein; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00370; hypothetical protein 3578238 11056107 Murru_3255 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789696.1 3577504 R 886377 CDS YP_004789697.1 344204554 11056108 complement(3578235..3578978) 1 NC_015945.1 PFAM: LamB/YcsF family; COGs: COG1540 conserved hypothetical protein; InterPro IPR005501; KEGG: fbc:FB2170_12361 hypothetical protein; PFAM: Uncharacterised protein family UPF0271, LamB/YcsF; SPTR: Putative uncharacterized protein; LamB/YcsF family protein 3578978 11056108 Murru_3256 Muricauda ruestringensis DSM 13258 LamB/YcsF family protein YP_004789697.1 3578235 R 886377 CDS YP_004789698.1 344204555 11056109 complement(3579192..3580388) 1 NC_015945.1 PFAM: Natural resistance-associated macrophage protein; TIGRFAM: NRAMP (natural resistance-associated macrophage protein) metal ion transporters; COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; InterPro IPR001046; KEGG: fbc:FB2170_12366 NRAMP family Mn2+/Fe2+ transporter; PFAM: Natural resistance-associated macrophage protein; SPTR: Mn2+/Fe2+ transporter, NRAMP family protein; natural resistance-associated macrophage protein 3580388 11056109 Murru_3257 Muricauda ruestringensis DSM 13258 natural resistance-associated macrophage protein YP_004789698.1 3579192 R 886377 CDS YP_004789699.1 344204556 11056110 3580570..3581013 1 NC_015945.1 KEGG: fbc:FB2170_12376 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3581013 11056110 Murru_3258 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789699.1 3580570 D 886377 CDS YP_004789700.1 344204557 11056111 complement(3581010..3581420) 1 NC_015945.1 KEGG: mno:Mnod_3161 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3581420 11056111 Murru_3259 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789700.1 3581010 R 886377 CDS YP_004789701.1 344204558 11056112 complement(3581602..3583137) 1 NC_015945.1 PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein; COGs: COG0606 ATPase with chaperone activity; InterPro IPR004482:IPR000523:IPR003593; KEGG: fbc:FB2170_12411 magnesium chelatase subunit ChlI; PFAM: Magnesium chelatase, ChlI subunit; SMART: ATPase, AAA+ type, core; SPTR: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein; Mg chelatase subunit ChlI 3583137 11056112 Murru_3260 Muricauda ruestringensis DSM 13258 Mg chelatase subunit ChlI YP_004789701.1 3581602 R 886377 CDS YP_004789702.1 344204559 11056113 complement(3583245..3585632) 1 NC_015945.1 PFAM: Penicillin amidase; COGs: COG2366 Protein related to penicillin acylase; InterPro IPR002692; KEGG: fbc:FB2170_12451 penicillin amidase; PFAM: Peptidase S45, penicillin amidase; PRIAM: Acyl-homoserine-lactone acylase; SPTR: Penicillin amidase; acyl-homoserine-lactone acylase 3585632 11056113 Murru_3261 Muricauda ruestringensis DSM 13258 acyl-homoserine-lactone acylase YP_004789702.1 3583245 R 886377 CDS YP_004789703.1 344204560 11056114 complement(3585715..3587694) 1 NC_015945.1 PFAM: Cytochrome C biogenesis protein transmembrane region; Protein of unknown function, DUF255; COGs: COG4232 Thiol:disulfide interchange protein; KEGG: rbi:RB2501_14344 thiol:disulfide interchange protein DsbD; PRIAM: Protein-disulfide reductase; SPTR: Thiol:disulfide interchange protein dsbD, putative; Protein-disulfide reductase 3587694 11056114 Murru_3262 Muricauda ruestringensis DSM 13258 Protein-disulfide reductase YP_004789703.1 3585715 R 886377 CDS YP_004789704.1 344204561 11056115 complement(3587691..3589001) 1 NC_015945.1 PFAM: TilS substrate C-terminal domain; PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain; COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; HAMAP: Lysidine-tRNA(Ile) synthetase; InterPro IPR012094:IPR012795:IPR012796:IPR011063; KEGG: fbc:FB2170_12466 putative cell-cycle protein; PFAM: tRNA(Ile)-lysidine/2-thiocytidine synthase; SMART: Lysidine-tRNA(Ile) synthetase, C-terminal; SPTR: tRNA(Ile)-lysidine synthase; TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; Lysidine-tRNA(Ile) synthetase, C-terminal; tRNA(Ile)-lysidine synthase 3589001 11056115 Murru_3263 Muricauda ruestringensis DSM 13258 tRNA(Ile)-lysidine synthase YP_004789704.1 3587691 R 886377 CDS YP_004789705.1 344204562 11056116 complement(3589349..3589546) 1 NC_015945.1 hypothetical protein 3589546 11056116 Murru_3264 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789705.1 3589349 R 886377 CDS YP_004789706.1 344204563 11056117 3589582..3591468 1 NC_015945.1 PFAM: Mycoplasma protein of unknown function, DUF285; Cadherin domain; TIGRFAM: bacterial surface protein 26-residue repeat; InterPro IPR011889:IPR002126:IPR005046; KEGG: srm:PSR_61030 conserved hypothetical protein containing fibronectin, type III domain; PFAM: Protein of unknown function DUF285, lipoprotein predicted; Cadherin; SMART: Cadherin; SPTR: Putative uncharacterized protein; TIGRFAM: Bacterial surface protein 26-residue repeat; lipoprotein 3591468 11056117 Murru_3265 Muricauda ruestringensis DSM 13258 lipoprotein YP_004789706.1 3589582 D 886377 CDS YP_004789707.1 344204564 11056118 complement(3591918..3593204) 1 NC_015945.1 PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR015890; KEGG: fbc:FB2170_12476 para-aminobenzoate synthase component I; PFAM: Chorismate binding, C-terminal; PRIAM: Anthranilate synthase; SPTR: Putative uncharacterized protein; anthranilate synthase 3593204 11056118 Murru_3266 Muricauda ruestringensis DSM 13258 anthranilate synthase YP_004789707.1 3591918 R 886377 CDS YP_004789708.1 344204565 11056119 complement(3593208..3593744) 1 NC_015945.1 PFAM: NADPH-dependent FMN reductase; COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: fbc:FB2170_12481 hypothetical protein; PFAM: NADPH-dependent FMN reductase; SPTR: Putative uncharacterized protein; NADPH-dependent FMN reductase 3593744 11056119 Murru_3267 Muricauda ruestringensis DSM 13258 NADPH-dependent FMN reductase YP_004789708.1 3593208 R 886377 CDS YP_004789709.1 344204566 11056120 3593875..3595071 1 NC_015945.1 PFAM: Protein of unknown function (DUF1624); KEGG: fbc:FB2170_12486 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3595071 11056120 Murru_3268 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789709.1 3593875 D 886377 CDS YP_004789710.1 344204567 11056121 complement(3595206..3596609) 1 NC_015945.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR006258:IPR013027:IPR004099; KEGG: fbc:FB2170_12491 dihydrolipoyl dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: Dihydrolipoyl dehydrogenase; SPTR: Dihydrolipoyl dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase 3596609 11056121 Murru_3269 Muricauda ruestringensis DSM 13258 dihydrolipoamide dehydrogenase YP_004789710.1 3595206 R 886377 CDS YP_004789711.1 344204568 11056122 3596644..3597234 1 NC_015945.1 hypothetical protein 3597234 11056122 Murru_3270 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789711.1 3596644 D 886377 CDS YP_004789712.1 344204569 11056123 complement(3597698..3599356) 1 NC_015945.1 PFAM: Mycoplasma protein of unknown function, DUF285; Cadherin domain; TIGRFAM: bacterial surface protein 26-residue repeat; InterPro IPR011889:IPR002126:IPR005046; KEGG: mtt:Ftrac_0811 lipoprotein; PFAM: Protein of unknown function DUF285, lipoprotein predicted; Cadherin; SMART: Cadherin; SPTR: Putative uncharacterized protein; TIGRFAM: Bacterial surface protein 26-residue repeat; lipoprotein 3599356 11056123 Murru_3271 Muricauda ruestringensis DSM 13258 lipoprotein YP_004789712.1 3597698 R 886377 CDS YP_004789713.1 344204570 11056124 complement(3599755..3600219) 1 NC_015945.1 PFAM: AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019887:IPR019888; KEGG: fbc:FB2170_12496 putative AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; SPTR: Putative AsnC-family transcriptional regulator; AsnC family transcriptional regulator 3600219 11056124 Murru_3272 Muricauda ruestringensis DSM 13258 AsnC family transcriptional regulator YP_004789713.1 3599755 R 886377 CDS YP_004789714.1 344204571 11056125 3600292..3601590 1 NC_015945.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: fbc:FB2170_12501 cystathionine beta-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cystathionine gamma-lyase; SPTR: Cystathionine beta-lyase; cystathionine gamma-synthase 3601590 11056125 Murru_3273 Muricauda ruestringensis DSM 13258 cystathionine gamma-synthase YP_004789714.1 3600292 D 886377 CDS YP_004789715.1 344204572 11056126 3601662..3603152 1 NC_015945.1 PFAM: Na+/H+ antiporter family; TIGRFAM: Na+/H+ antiporter NhaC; COGs: COG1757 Na+/H+ antiporter; InterPro IPR004770:IPR018461; KEGG: fbc:FB2170_12506 putative Na+/H+ antiporter NnaC; PFAM: Na+/H+ antiporter NhaC-like; SPTR: Putative Na+/H+ antiporter NnaC; TIGRFAM: Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 3603152 11056126 Murru_3274 Muricauda ruestringensis DSM 13258 Na+/H+ antiporter NhaC YP_004789715.1 3601662 D 886377 CDS YP_004789716.1 344204573 11056127 3603363..3604007 1 NC_015945.1 PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; COGs: COG0450 Peroxiredoxin; InterPro IPR000866:IPR019479; KEGG: fbc:FB2170_12511 putative thioredoxin peroxidase; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Peroxiredoxin, C-terminal; PRIAM: Peroxiredoxin; SPTR: Putative thioredoxin peroxidase; peroxiredoxin 3604007 11056127 Murru_3275 Muricauda ruestringensis DSM 13258 peroxiredoxin YP_004789716.1 3603363 D 886377 CDS YP_004789717.1 344204574 11056128 3604013..3604327 1 NC_015945.1 PFAM: Thioredoxin; InterPro IPR013766; KEGG: fbc:FB2170_12516 thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin domain protein; thioredoxin domain-containing protein 3604327 11056128 Murru_3276 Muricauda ruestringensis DSM 13258 thioredoxin domain-containing protein YP_004789717.1 3604013 D 886377 CDS YP_004789718.1 344204575 11056129 3604308..3604565 1 NC_015945.1 KEGG: fps:FP1727 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3604565 11056129 Murru_3277 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789718.1 3604308 D 886377 CDS YP_004789719.1 344204576 11056130 3604704..3605069 1 NC_015945.1 PFAM: Prokaryotic diacylglycerol kinase; COGs: COG0818 Diacylglycerol kinase; InterPro IPR000829; KEGG: fbc:FB2170_12531 putative diacylglycerol kinase; PFAM: Diacylglycerol kinase, prokaryotic; SPTR: Probable diacylglycerol kinase; diacylglycerol kinase 3605069 11056130 Murru_3278 Muricauda ruestringensis DSM 13258 diacylglycerol kinase YP_004789719.1 3604704 D 886377 CDS YP_004789720.1 344204577 11056131 3605132..3607519 1 NC_015945.1 PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543:IPR018541; KEGG: rbi:RB2501_14289 FtsK/SpoIIIE family protein; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase FtsK gamma; SMART: DNA translocase FtsK gamma; SPTR: FtsK/SpoIIIE family protein; cell division protein FtsK 3607519 11056131 Murru_3279 Muricauda ruestringensis DSM 13258 cell division protein FtsK YP_004789720.1 3605132 D 886377 CDS YP_004789721.1 344204578 11056132 3607524..3608171 1 NC_015945.1 PFAM: Outer membrane lipoprotein carrier protein LolA; KEGG: fbc:FB2170_12546 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3608171 11056132 Murru_3280 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789721.1 3607524 D 886377 CDS YP_004789722.1 344204579 11056133 3608175..3609677 1 NC_015945.1 PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: fbc:FB2170_12551 hypothetical protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Putative uncharacterized protein; YjgP/YjgQ family permease 3609677 11056133 Murru_3281 Muricauda ruestringensis DSM 13258 YjgP/YjgQ family permease YP_004789722.1 3608175 D 886377 CDS YP_004789723.1 344204580 11056134 3609674..3610813 1 NC_015945.1 PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase; HAMAP: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; InterPro IPR000422:IPR000926; KEGG: fbc:FB2170_12556 putative riboflavin biosynthesis protein; PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP cyclohydrolase II, RibA; SPTR: Putative riboflavin biosynthesis protein; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; 3,4-dihydroxy-2-butanone 4-phosphate synthase 3610813 11056134 Murru_3282 Muricauda ruestringensis DSM 13258 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_004789723.1 3609674 D 886377 CDS YP_004789724.1 344204581 11056135 complement(3610733..3610906) 1 NC_015945.1 hypothetical protein 3610906 11056135 Murru_3283 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789724.1 3610733 R 886377 CDS YP_004789725.1 344204582 11056136 complement(3611052..3612914) 1 NC_015945.1 PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_13783 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor, putative; TonB-dependent receptor 3612914 11056136 Murru_3284 Muricauda ruestringensis DSM 13258 TonB-dependent receptor YP_004789725.1 3611052 R 886377 CDS YP_004789726.1 344204583 11056137 3613596..3614747 1 NC_015945.1 PFAM: Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: fbc:FB2170_13793 ABC transporter periplasmic-binding protein; PFAM: Periplasmic binding protein; SPTR: Periplasmic-binding protein of ABC transporter; ABC transporter periplasmic protein 3614747 11056137 Murru_3285 Muricauda ruestringensis DSM 13258 ABC transporter periplasmic protein YP_004789726.1 3613596 D 886377 CDS YP_004789727.1 344204584 11056138 3614748..3615779 1 NC_015945.1 PFAM: FecCD transport family; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: fbc:FB2170_13798 permease of iron(III) ABC transporter; PFAM: ABC transporter permease protein; SPTR: Permease protein of iron(III) ABC transporter; ABC transporter 3615779 11056138 Murru_3286 Muricauda ruestringensis DSM 13258 ABC transporter YP_004789727.1 3614748 D 886377 CDS YP_004789728.1 344204585 11056139 3615779..3616558 1 NC_015945.1 PFAM: ABC transporter; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439:IPR003593; KEGG: rbi:RB2501_00221 putative iron transport related ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Iron-chelate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative iron transport related ATP-binding protein; iron-chelate-transporting ATPase 3616558 11056139 Murru_3287 Muricauda ruestringensis DSM 13258 iron-chelate-transporting ATPase YP_004789728.1 3615779 D 886377 CDS YP_004789729.1 344204586 11056140 3616886..3618220 1 NC_015945.1 PFAM: RmuC family; COGs: COG1322 conserved hypothetical protein; InterPro IPR003798; KEGG: fbc:FB2170_13808 hypothetical protein; PFAM: DNA recombination RmuC; SPTR: Putative uncharacterized protein; RmuC-domain-containing protein 3618220 11056140 Murru_3288 Muricauda ruestringensis DSM 13258 RmuC-domain-containing protein YP_004789729.1 3616886 D 886377 CDS YP_004789730.1 344204587 11056141 3618233..3618598 1 NC_015945.1 KEGG: fbc:FB2170_13813 6-phosphogluconate dehydrogenase; SPTR: 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase 3618598 11056141 Murru_3289 Muricauda ruestringensis DSM 13258 6-phosphogluconate dehydrogenase YP_004789730.1 3618233 D 886377 CDS YP_004789731.1 344204588 11056142 complement(3618882..3619280) 1 NC_015945.1 PFAM: Protein of unknown function (DUF559); COGs: COG2852 conserved hypothetical protein; InterPro IPR007569; KEGG: mtt:Ftrac_0387 hypothetical protein; PFAM: Domain of unknown function DUF559; SPTR: Putative uncharacterized protein; hypothetical protein 3619280 11056142 Murru_3290 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789731.1 3618882 R 886377 CDS YP_004789732.1 344204589 11056143 3619341..3619886 1 NC_015945.1 PFAM: Thioesterase superfamily; COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: zpr:ZPR_2053 acyl-CoA thioester hydrolase; PFAM: Thioesterase superfamily; SPTR: Acyl CoA thioester hydrolase family protein; thioesterase superfamily protein 3619886 11056143 Murru_3291 Muricauda ruestringensis DSM 13258 thioesterase superfamily protein YP_004789732.1 3619341 D 886377 CDS YP_004789733.1 344204590 11056144 complement(3619867..3620592) 1 NC_015945.1 PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase; COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; InterPro IPR005900:IPR006148; KEGG: rbi:RB2501_00236 6-phosphogluconolactonase; PFAM: Glucosamine/galactosamine-6-phosphate isomerase; PRIAM: 6-phosphogluconolactonase; SPTR: 6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase, DevB-type; 6-phosphogluconolactonase 3620592 11056144 Murru_3292 Muricauda ruestringensis DSM 13258 6-phosphogluconolactonase YP_004789733.1 3619867 R 886377 CDS YP_004789734.1 344204591 11056145 complement(3620698..3622209) 1 NC_015945.1 PFAM: Glucose-6-phosphate dehydrogenase, C-terminal domain; Glucose-6-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; COGs: COG0364 Glucose-6-phosphate 1-dehydrogenase; InterPro IPR001282:IPR022674:IPR022675; KEGG: rbi:RB2501_00241 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase, C-terminal; Glucose-6-phosphate dehydrogenase, NAD-binding; PRIAM: Glucose-6-phosphate dehydrogenase; SPTR: Glucose-6-phosphate 1-dehydrogenase; TIGRFAM: Glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase 3622209 11056145 Murru_3293 Muricauda ruestringensis DSM 13258 glucose-6-phosphate 1-dehydrogenase YP_004789734.1 3620698 R 886377 CDS YP_004789735.1 344204592 11056146 3622396..3623805 1 NC_015945.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase, C-terminal domain; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; COGs: COG0362 6-phosphogluconate dehydrogenase; InterPro IPR006113:IPR006115:IPR006114; KEGG: fbc:FB2170_13818 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, C-terminal; 6-phosphogluconate dehydrogenase, NAD-binding; PRIAM: Phosphogluconate dehydrogenase (decarboxylating); SPTR: 6-phosphogluconate dehydrogenase, decarboxylating; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphogluconate dehydrogenase 3623805 11056146 Murru_3294 Muricauda ruestringensis DSM 13258 6-phosphogluconate dehydrogenase YP_004789735.1 3622396 D 886377 CDS YP_004789736.1 344204593 11056147 3623816..3624667 1 NC_015945.1 PFAM: Protein of unknown function, DUF399; COGs: COG3016 Uncharacterized iron-regulated protein; InterPro IPR007314; KEGG: mtt:Ftrac_2035 hypothetical protein; PFAM: Domain of unknown function DUF399; SPTR: Putative uncharacterized protein; hypothetical protein 3624667 11056147 Murru_3295 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789736.1 3623816 D 886377 CDS YP_004789737.1 344204594 11056148 3624759..3626786 1 NC_015945.1 PFAM: Prolyl oligopeptidase family; WD40-like Beta Propeller Repeat; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR011659:IPR001375; KEGG: srm:SRM_02249 putative peptidase; SPTR: Peptidase, S9A/B/C family; putative peptidase 3626786 11056148 Murru_3296 Muricauda ruestringensis DSM 13258 putative peptidase YP_004789737.1 3624759 D 886377 CDS YP_004789738.1 344204595 11056149 3627084..3628760 1 NC_015945.1 PFAM: Bacterial protein of unknown function (DUF885); KEGG: mtt:Ftrac_2937 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3628760 11056149 Murru_3297 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789738.1 3627084 D 886377 CDS YP_004789739.1 344204596 11056150 complement(3628841..3629596) 1 NC_015945.1 PFAM: Domain of unknown function DUF1828; InterPro IPR014960; KEGG: tye:THEYE_A1695 hypothetical protein; PFAM: Domain of unknown function DUF1828; SPTR: Putative uncharacterized protein; hypothetical protein 3629596 11056150 Murru_3298 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789739.1 3628841 R 886377 CDS YP_004789740.1 344204597 11056151 complement(3629596..3630093) 1 NC_015945.1 KEGG: tye:THEYE_A1696 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3630093 11056151 Murru_3299 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789740.1 3629596 R 886377 CDS YP_004789741.1 344204598 11056152 complement(3630479..3630802) 1 NC_015945.1 hypothetical protein 3630802 11056152 Murru_3300 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789741.1 3630479 R 886377 CDS YP_004789742.1 344204599 11056153 3630950..3631573 1 NC_015945.1 PFAM: Methyltransferase domain; KEGG: fjo:Fjoh_4631 methyltransferase type 11; SPTR: Putative uncharacterized protein; type 11 methyltransferase 3631573 11056153 Murru_3301 Muricauda ruestringensis DSM 13258 type 11 methyltransferase YP_004789742.1 3630950 D 886377 CDS YP_004789743.1 344204600 11056154 3631699..3633510 1 NC_015945.1 PFAM: Helix-turn-helix; Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001387:IPR001466; KEGG: rbi:RB2501_10657 hypothetical protein; PFAM: Beta-lactamase-related; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; XRE family transcriptional regulator 3633510 11056154 Murru_3302 Muricauda ruestringensis DSM 13258 XRE family transcriptional regulator YP_004789743.1 3631699 D 886377 CDS YP_004789744.1 344204601 11056155 3633647..3635329 1 NC_015945.1 PFAM: D-aminoacylase, C-terminal region; Amidohydrolase family; COGs: COG3653 N-acyl-D-aspartate/D-glutamate deacylase; InterPro IPR006680:IPR012855; KEGG: gau:GAU_2343 D-aminoacylase; PFAM: D-aminoacylase, C-terminal; Amidohydrolase 1; PRIAM: N-acyl-D-amino-acid deacylase; SPTR: N-acyl-D-amino-acid deacylase; N-acyl-D-amino-acid deacylase 3635329 11056155 Murru_3303 Muricauda ruestringensis DSM 13258 N-acyl-D-amino-acid deacylase YP_004789744.1 3633647 D 886377 CDS YP_004789745.1 344204602 11056156 3635511..3636956 1 NC_015945.1 PFAM: Tetratricopeptide repeat; Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466:IPR001440:IPR019734; KEGG: fjo:Fjoh_2768 beta-lactamase; PFAM: Beta-lactamase-related; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: Beta-lactamase; beta-lactamase 3636956 11056156 Murru_3304 Muricauda ruestringensis DSM 13258 beta-lactamase YP_004789745.1 3635511 D 886377 CDS YP_004789746.1 344204603 11056157 complement(3636976..3637221) 1 NC_015945.1 PFAM: ThiS family; InterPro IPR003749; KEGG: rbi:RB2501_14949 hypothetical protein; PFAM: ThiamineS; SPTR: Putative uncharacterized protein; sulfur carrier protein ThiS 3637221 11056157 Murru_3305 Muricauda ruestringensis DSM 13258 sulfur carrier protein ThiS YP_004789746.1 3636976 R 886377 CDS YP_004789747.1 344204604 11056158 3637436..3638518 1 NC_015945.1 PFAM: von Willebrand factor type A domain; InterPro IPR002035; KEGG: rbi:RB2501_14954 hypothetical protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: Putative uncharacterized protein; von Willebrand factor type A 3638518 11056158 Murru_3306 Muricauda ruestringensis DSM 13258 von Willebrand factor type A YP_004789747.1 3637436 D 886377 CDS YP_004789748.1 344204605 11056159 3638592..3639539 1 NC_015945.1 PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: fbc:FB2170_13101 putative glycosyl hydrolase; PFAM: Protein of unknown function DUF1080; SPTR: Probable large multifunctional protein-putative glycosyl hydrolase; hypothetical protein 3639539 11056159 Murru_3307 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789748.1 3638592 D 886377 CDS YP_004789749.1 344204606 11056160 complement(3639848..3640447) 1 NC_015945.1 PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: fbc:FB2170_07170 putative secreted glycosyl hydrolase; PFAM: Protein of unknown function DUF1080; SPTR: Probable secreted glycosyl hydrolase; hypothetical protein 3640447 11056160 Murru_3308 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789749.1 3639848 R 886377 CDS YP_004789750.1 344204607 11056161 complement(3640486..3641913) 1 NC_015945.1 PFAM: Zinc carboxypeptidase; InterPro IPR000834; KEGG: fbc:FB2170_11411 hypothetical protein; PFAM: Peptidase M14, carboxypeptidase A; SMART: Peptidase M14, carboxypeptidase A; SPTR: Putative uncharacterized protein; peptidase M14 carboxypeptidase A 3641913 11056161 Murru_3309 Muricauda ruestringensis DSM 13258 peptidase M14 carboxypeptidase A YP_004789750.1 3640486 R 886377 CDS YP_004789751.1 344204608 11056162 complement(3641940..3642596) 1 NC_015945.1 PFAM: N-acetylmuramoyl-L-alanine amidase; InterPro IPR002502; KEGG: fbc:FB2170_11406 hypothetical protein; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2; SPTR: Putative uncharacterized protein; N-acetylmuramoyl-L-alanine amidase family protein 3642596 11056162 Murru_3310 Muricauda ruestringensis DSM 13258 N-acetylmuramoyl-L-alanine amidase family protein YP_004789751.1 3641940 R 886377 CDS YP_004789752.1 344204609 11056163 complement(3642662..3643648) 1 NC_015945.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: zpr:ZPR_4669 transposase IS116/IS110/IS902 family; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; SPTR: Transposase; transposase IS116/IS110/IS902 family protein 3643648 11056163 Murru_3311 Muricauda ruestringensis DSM 13258 transposase IS116/IS110/IS902 family protein YP_004789752.1 3642662 R 886377 CDS YP_004789753.1 344204610 11056164 complement(3643972..3644358) 1 NC_015945.1 KEGG: fbc:FB2170_11401 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3644358 11056164 Murru_3312 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789753.1 3643972 R 886377 CDS YP_004789754.1 344204611 11056165 complement(3644391..3645878) 1 NC_015945.1 KEGG: fbc:FB2170_07339 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3645878 11056165 Murru_3313 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789754.1 3644391 R 886377 CDS YP_004789755.1 344204612 11056166 complement(3645914..3646786) 1 NC_015945.1 PFAM: Pirin C-terminal cupin domain; Pirin; COGs: COG1741 Pirin-related protein; InterPro IPR003829:IPR008778; KEGG: gfo:GFO_1142 pirin family protein; PFAM: Pirin, N-terminal; Pirin, C-terminal; SPTR: Pirin, N-terminal:Pirin, C-terminal; Pirin domain-containing protein 3646786 11056166 Murru_3314 Muricauda ruestringensis DSM 13258 Pirin domain-containing protein YP_004789755.1 3645914 R 886377 CDS YP_004789756.1 344204613 11056167 3646807..3648171 1 NC_015945.1 PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: fbc:FB2170_11396 putative hydrolase transmembrane protein; PFAM: Beta-lactamase-related; SPTR: Putative hydrolase transmembrane protein; beta-lactamase 3648171 11056167 Murru_3315 Muricauda ruestringensis DSM 13258 beta-lactamase YP_004789756.1 3646807 D 886377 CDS YP_004789757.1 344204614 11056168 complement(3648880..3650073) 1 NC_015945.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: fbc:FB2170_12561 polysaccharide biosynthesis protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: Glutamine--scyllo-inositol transaminase; SPTR: Polysaccharide biosynthesis protein; glutamine--scyllo-inositol transaminase 3650073 11056168 Murru_3316 Muricauda ruestringensis DSM 13258 glutamine--scyllo-inositol transaminase YP_004789757.1 3648880 R 886377 CDS YP_004789758.1 344204615 11056169 complement(3650088..3650840) 1 NC_015945.1 PFAM: Sulfite exporter TauE/SafE; COGs: COG0730 permease; InterPro IPR002781; KEGG: rbi:RB2501_14259 hypothetical protein; PFAM: Protein of unknown function DUF81; SPTR: Putative uncharacterized protein; hypothetical protein 3650840 11056169 Murru_3317 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789758.1 3650088 R 886377 CDS YP_004789759.1 344204616 11056171 3651331..3652560 1 NC_015945.1 PFAM: Phage integrase family; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: gfo:GFO_0671 phage integrase family protein; PFAM: Integrase, catalytic core, phage; SPTR: Phage integrase family protein; integrase family protein 3652560 11056171 Murru_3318 Muricauda ruestringensis DSM 13258 integrase family protein YP_004789759.1 3651331 D 886377 CDS YP_004789760.1 344204617 11056174 complement(3653479..3654402) 1 NC_015945.1 PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain; COGs: COG3550 conserved hypothetical protein; InterPro IPR012894:IPR012893; KEGG: lpn:lpg2370 hypothetical protein; PFAM: HipA-like, N-terminal; HipA-like, C-terminal; SPTR: Putative uncharacterized protein; HipA domain-containing protein 3654402 11056174 Murru_3321 Muricauda ruestringensis DSM 13258 HipA domain-containing protein YP_004789760.1 3653479 R 886377 CDS YP_004789761.1 344204618 11056175 complement(3654395..3654712) 1 NC_015945.1 TIGRFAM: HipA N-terminal domain; InterPro IPR017508; KEGG: lpa:lpa_03436 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: HipA, N-terminal; HipA N-terminal domain-containing protein 3654712 11056175 Murru_3322 Muricauda ruestringensis DSM 13258 HipA N-terminal domain-containing protein YP_004789761.1 3654395 R 886377 CDS YP_004789762.1 344204619 11056176 complement(3654709..3654924) 1 NC_015945.1 PFAM: Helix-turn-helix; TIGRFAM: transcriptional regulator, y4mF family; InterPro IPR001387; KEGG: lpn:lpg2377 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; helix-turn-helix domain-containing protein 3654924 11056176 Murru_3323 Muricauda ruestringensis DSM 13258 helix-turn-helix domain-containing protein YP_004789762.1 3654709 R 886377 CDS YP_004789763.1 344204620 11056177 complement(3655335..3655517) 1 NC_015945.1 hypothetical protein 3655517 11056177 Murru_3324 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789763.1 3655335 R 886377 CDS YP_004789764.1 344204621 11056178 complement(3655888..3657324) 1 NC_015945.1 PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: gfo:GFO_3598 sodium:sulfate symporter; PFAM: Sodium/sulphate symporter; SPTR: Sodium-dependent transporter; TIGRFAM: Sodium/sulphate symporter; anion transporter 3657324 11056178 Murru_3325 Muricauda ruestringensis DSM 13258 anion transporter YP_004789764.1 3655888 R 886377 CDS YP_004789765.1 344204622 11056179 complement(3657404..3660058) 1 NC_015945.1 KEGG: rmr:Rmar_2079 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3660058 11056179 Murru_3326 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789765.1 3657404 R 886377 CDS YP_004789766.1 344204623 11056180 complement(3660081..3660926) 1 NC_015945.1 PFAM: ROK family; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: fbc:FB2170_17456 ROK family protein; PFAM: ROK; SPTR: ROK family protein; ROK family protein 3660926 11056180 Murru_3327 Muricauda ruestringensis DSM 13258 ROK family protein YP_004789766.1 3660081 R 886377 CDS YP_004789767.1 344204624 11056181 complement(3660926..3662182) 1 NC_015945.1 PFAM: Major Facilitator Superfamily; COGs: COG0738 Fucose permease; InterPro IPR011701; KEGG: dfe:Dfer_4329 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Glucose/galactose transporter; major facilitator superfamily protein 3662182 11056181 Murru_3328 Muricauda ruestringensis DSM 13258 major facilitator superfamily protein YP_004789767.1 3660926 R 886377 CDS YP_004789768.1 344204625 11056182 complement(3662234..3663121) 1 NC_015945.1 PFAM: GlcNAc-PI de-N-acetylase; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: rmr:Rmar_1217 LmbE family protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; SPTR: Putative uncharacterized protein; LmbE family protein 3663121 11056182 Murru_3329 Muricauda ruestringensis DSM 13258 LmbE family protein YP_004789768.1 3662234 R 886377 CDS YP_004789769.1 344204626 11056183 complement(3663316..3664695) 1 NC_015945.1 PFAM: SusD family; InterPro IPR012944; KEGG: rmr:Rmar_2081 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: Putative outer membrane protein, probably involved in nutrient binding; RagB/SusD domain-containing protein 3664695 11056183 Murru_3330 Muricauda ruestringensis DSM 13258 RagB/SusD domain-containing protein YP_004789769.1 3663316 R 886377 CDS YP_004789770.1 344204627 11056184 complement(3664713..3668237) 1 NC_015945.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: rmr:Rmar_2082 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein, probably involved in nutrient binding; TonB-dependent receptor plug 3668237 11056184 Murru_3331 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004789770.1 3664713 R 886377 CDS YP_004789771.1 344204628 11056185 complement(3668299..3669477) 1 NC_015945.1 PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: fjo:Fjoh_2007 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Putative anti-sigma factor; anti-FecI sigma factor FecR 3669477 11056185 Murru_3332 Muricauda ruestringensis DSM 13258 anti-FecI sigma factor FecR YP_004789771.1 3668299 R 886377 CDS YP_004789772.1 344204629 11056186 complement(3669627..3670181) 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR014284:IPR014327:IPR007627:IPR013249:IPR 000792; KEGG: zpr:ZPR_0388 ECF subfamily RNA polymerase sigma-24 factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SMART: Transcription regulator LuxR, C-terminal; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 3670181 11056186 Murru_3333 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004789772.1 3669627 R 886377 CDS YP_004789773.1 344204630 11056188 3671853..3674237 1 NC_015945.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: gfo:GFO_1311 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent outer membrane receptor; TonB-dependent receptor 3674237 11056188 Murru_3335 Muricauda ruestringensis DSM 13258 TonB-dependent receptor YP_004789773.1 3671853 D 886377 CDS YP_004789774.1 344204631 11056189 3674257..3675396 1 NC_015945.1 COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625; KEGG: zpr:ZPR_4048 putative sulfite reductase flavoprotein component; PFAM: PepSY-associated TM helix; SPTR: Putative sulfite reductase flavoprotein component; PepSY-associated TM helix domain-containing protein 3675396 11056189 Murru_3336 Muricauda ruestringensis DSM 13258 PepSY-associated TM helix domain-containing protein YP_004789774.1 3674257 D 886377 CDS YP_004789775.1 344204632 11056190 complement(3675494..3675700) 1 NC_015945.1 KEGG: pin:Ping_1936 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 3675700 11056190 Murru_3337 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789775.1 3675494 R 886377 CDS YP_004789776.1 344204633 11056192 complement(3676618..3677436) 1 NC_015945.1 KEGG: cat:CA2559_05120 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3677436 11056192 Murru_3339 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789776.1 3676618 R 886377 CDS YP_004789777.1 344204634 11056194 complement(3677763..3679574) 1 NC_015945.1 PFAM: Sodium:solute symporter family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: fbc:FB2170_06235 sodium/glucose cotransporter; PFAM: Sodium/solute symporter; SPTR: Sodium/glucose cotransporter; Na+/solute symporter 3679574 11056194 Murru_3341 Muricauda ruestringensis DSM 13258 Na+/solute symporter YP_004789777.1 3677763 R 886377 CDS YP_004789778.1 344204635 11056195 complement(3679718..3680524) 1 NC_015945.1 PFAM: Endonuclease/Exonuclease/phosphatase family; COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: rba:RB8407 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Probable secreted protein; endonuclease/exonuclease/phosphatase 3680524 11056195 Murru_3342 Muricauda ruestringensis DSM 13258 endonuclease/exonuclease/phosphatase YP_004789778.1 3679718 R 886377 CDS YP_004789779.1 344204636 11056196 complement(3680528..3683920) 1 NC_015945.1 PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: dfe:Dfer_2976 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; hypothetical protein 3683920 11056196 Murru_3343 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789779.1 3680528 R 886377 CDS YP_004789780.1 344204637 11056197 complement(3684036..3685292) 1 NC_015945.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: phe:Phep_2673 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: NADH-dependent dehydrogenase; oxidoreductase domain-containing protein 3685292 11056197 Murru_3344 Muricauda ruestringensis DSM 13258 oxidoreductase domain-containing protein YP_004789780.1 3684036 R 886377 CDS YP_004789781.1 344204638 11056198 complement(3685463..3687787) 1 NC_015945.1 InterPro IPR006558; KEGG: pdi:BDI_2626 hypothetical protein; SMART: LamG-like jellyroll fold; SPTR: Putative uncharacterized protein; LamG domain-containing protein jellyroll fold domain-containing protein 3687787 11056198 Murru_3345 Muricauda ruestringensis DSM 13258 LamG domain-containing protein jellyroll fold domain-containing protein YP_004789781.1 3685463 R 886377 CDS YP_004789782.1 344204639 11056199 complement(3687918..3689363) 1 NC_015945.1 PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family; InterPro IPR005828:IPR003663; KEGG: pjd:Pjdr2_1340 sugar transporter; PFAM: General substrate transporter; SPTR: Arabinose-proton symporter; TIGRFAM: Sugar/inositol transporter; sugar transporter 3689363 11056199 Murru_3346 Muricauda ruestringensis DSM 13258 sugar transporter YP_004789782.1 3687918 R 886377 CDS YP_004789783.1 344204640 11056200 complement(3689356..3690573) 1 NC_015945.1 PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); COGs: COG2942 N-acyl-D-glucosamine 2-epimerase; InterPro IPR010819; KEGG: fbc:FB2170_03930 N-acyl-D-glucosamine 2-epimerase; PFAM: N-acylglucosamine 2-epimerase; PRIAM: N-acylglucosamine 2-epimerase; SPTR: N-acyl-D-glucosamine 2-epimerase; N-acylglucosamine 2-epimerase 3690573 11056200 Murru_3347 Muricauda ruestringensis DSM 13258 N-acylglucosamine 2-epimerase YP_004789783.1 3689356 R 886377 CDS YP_004789784.1 344204641 11056201 complement(3690598..3692745) 1 NC_015945.1 KEGG: phe:Phep_2992 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3692745 11056201 Murru_3348 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789784.1 3690598 R 886377 CDS YP_004789785.1 344204642 11056202 complement(3692907..3694667) 1 NC_015945.1 PFAM: SusD family; InterPro IPR012944; KEGG: bfs:BF3306 hypothetical protein; PFAM: RagB/SusD; SPTR: Putative outer membrane protein probably involved in nutrient binding; RagB/SusD domain-containing protein 3694667 11056202 Murru_3349 Muricauda ruestringensis DSM 13258 RagB/SusD domain-containing protein YP_004789785.1 3692907 R 886377 CDS YP_004789786.1 344204643 11056203 complement(3694682..3698128) 1 NC_015945.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR011662:IPR012910:IPR000531; KEGG: bfs:BF4256 putative outer membrane protein; PFAM: TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug domain protein; TonB-dependent receptor plug 3698128 11056203 Murru_3350 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004789786.1 3694682 R 886377 CDS YP_004789787.1 344204644 11056204 complement(3698277..3699482) 1 NC_015945.1 PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: gfo:GFO_1261 FecR family protein; PFAM: FecR protein; SPTR: FecR family protein; anti-FecI sigma factor FecR 3699482 11056204 Murru_3351 Muricauda ruestringensis DSM 13258 anti-FecI sigma factor FecR YP_004789787.1 3698277 R 886377 CDS YP_004789788.1 344204645 11056205 complement(3699555..3700133) 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR007627:IPR013249:IPR000792:IPR014284:IPR 014327; KEGG: bth:BT_3277 RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SMART: Transcription regulator LuxR, C-terminal; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 3700133 11056205 Murru_3352 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004789788.1 3699555 R 886377 CDS YP_004789789.1 344204646 11056206 complement(3700195..3700572) 1 NC_015945.1 hypothetical protein 3700572 11056206 Murru_3353 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789789.1 3700195 R 886377 CDS YP_004789790.1 344204647 11056207 complement(3700679..3701320) 1 NC_015945.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: cat:CA2559_01470 DNA-binding response regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SPTR: Putative nitrate/nitrite DNA-binding response regulator; two component LuxR family transcriptional regulator 3701320 11056207 Murru_3354 Muricauda ruestringensis DSM 13258 two component LuxR family transcriptional regulator YP_004789790.1 3700679 R 886377 CDS YP_004789791.1 344204648 11056208 complement(3701313..3703358) 1 NC_015945.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: cat:CA2559_01475 histidine kinase sensor protein; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Histidine kinase sensor protein; putative signal transduction histidine kinase 3703358 11056208 Murru_3355 Muricauda ruestringensis DSM 13258 putative signal transduction histidine kinase YP_004789791.1 3701313 R 886377 CDS YP_004789792.1 344204649 11056209 complement(3703472..3704374) 1 NC_015945.1 PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: gfo:GFO_1837 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein 3704374 11056209 Murru_3356 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789792.1 3703472 R 886377 CDS YP_004789793.1 344204650 11056210 complement(3704384..3709246) 1 NC_015945.1 InterPro IPR000601; KEGG: cat:CA2559_01455 cell wall associated biofilm protein; PFAM: PKD domain; SPTR: Cell wall associated biofilm protein; PKD domain-containing protein 3709246 11056210 Murru_3357 Muricauda ruestringensis DSM 13258 PKD domain-containing protein YP_004789793.1 3704384 R 886377 CDS YP_004789794.1 344204651 11056211 3709703..3711670 1 NC_015945.1 PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase, putative, Aquifex type; COGs: COG1048 Aconitase A; InterPro IPR001030:IPR000573:IPR006250; KEGG: rbi:RB2501_12277 aconitate hydratase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel; SPTR: Aconitate hydratase; TIGRFAM: Aconitase, putative; aconitate hydratase 3711670 11056211 Murru_3358 Muricauda ruestringensis DSM 13258 aconitate hydratase YP_004789794.1 3709703 D 886377 CDS YP_004789795.1 344204652 11056212 complement(3711791..3713248) 1 NC_015945.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR003423:IPR010131; KEGG: zpr:ZPR_1960 outer membrane efflux family protein; PFAM: Outer membrane efflux protein; SPTR: RND efflux system, outer membrane lipoprotein, NodT; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein 3713248 11056212 Murru_3359 Muricauda ruestringensis DSM 13258 NodT family RND efflux system outer membrane lipoprotein YP_004789795.1 3711791 R 886377 CDS YP_004789796.1 344204653 11056213 complement(3713208..3716477) 1 NC_015945.1 PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036:IPR004764; KEGG: fjo:Fjoh_4408 hydrophobe/amphiphile efflux-1 (HAE1) family protein; PFAM: Acriflavin resistance protein; SPTR: HAE1 efflux family protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 3716477 11056213 Murru_3360 Muricauda ruestringensis DSM 13258 hydrophobe/amphiphile efflux-1 (HAE1) family transporter YP_004789796.1 3713208 R 886377 CDS YP_004789797.1 344204654 11056214 complement(3716498..3717580) 1 NC_015945.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: dfe:Dfer_0982 efflux transporter, RND family, MFP subunit; PFAM: Secretion protein HlyD; SPTR: Secretion protein HlyD; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 3717580 11056214 Murru_3361 Muricauda ruestringensis DSM 13258 RND family efflux transporter MFP subunit YP_004789797.1 3716498 R 886377 CDS YP_004789798.1 344204655 11056215 complement(3717729..3718130) 1 NC_015945.1 hypothetical protein 3718130 11056215 Murru_3362 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789798.1 3717729 R 886377 CDS YP_004789799.1 344204656 11056216 3718529..3721936 1 NC_015945.1 PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type; COGs: COG1413 FOG: HEAT repeat; InterPro IPR004155:IPR013427; KEGG: fbc:FB2170_15793 hypothetical protein; PFAM: PBS lyase HEAT-like repeat; SPTR: Putative uncharacterized protein; TIGRFAM: Haem-binding domain, putative; heme-binding protein 3721936 11056216 Murru_3363 Muricauda ruestringensis DSM 13258 heme-binding protein YP_004789799.1 3718529 D 886377 CDS YP_004789800.1 344204657 11056217 complement(3722042..3723376) 1 NC_015945.1 PFAM: Fibronectin type III domain; InterPro IPR003961; KEGG: hoh:Hoch_5795 hypothetical protein; PFAM: Fibronectin, type III; SMART: Fibronectin, type III; SPTR: Putative uncharacterized protein; fibronectin type III domain-containing protein 3723376 11056217 Murru_3364 Muricauda ruestringensis DSM 13258 fibronectin type III domain-containing protein YP_004789800.1 3722042 R 886377 CDS YP_004789801.1 344204658 11056218 complement(3723437..3724990) 1 NC_015945.1 PFAM: D-aminoacylase, C-terminal region; COGs: COG3653 N-acyl-D-aspartate/D-glutamate deacylase; InterPro IPR006680; KEGG: fbc:FB2170_04920 amidohydrolase family protein; PFAM: Amidohydrolase 1; PRIAM: N-acyl-D-amino-acid deacylase; SPTR: Amidohydrolase family protein; N-acyl-D-amino-acid deacylase 3724990 11056218 Murru_3365 Muricauda ruestringensis DSM 13258 N-acyl-D-amino-acid deacylase YP_004789801.1 3723437 R 886377 CDS YP_004789802.1 344204659 11056219 complement(3725098..3726261) 1 NC_015945.1 SPTR: Extracellular nuclease; hypothetical protein 3726261 11056219 Murru_3366 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789802.1 3725098 R 886377 CDS YP_004789803.1 344204660 11056220 complement(3726281..3727897) 1 NC_015945.1 KEGG: fbc:FB2170_02550 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3727897 11056220 Murru_3367 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789803.1 3726281 R 886377 CDS YP_004789804.1 344204661 11056221 complement(3727919..3731323) 1 NC_015945.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: rbi:RB2501_09830 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein probably involved in nutrient binding; TonB-dependent receptor plug 3731323 11056221 Murru_3368 Muricauda ruestringensis DSM 13258 TonB-dependent receptor plug YP_004789804.1 3727919 R 886377 CDS YP_004789805.1 344204662 11056222 complement(3731491..3732639) 1 NC_015945.1 PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: zpr:ZPR_0224 putative anti-sigma factor; PFAM: FecR protein; SPTR: Putative anti-sigma factor; anti-FecI sigma factor FecR 3732639 11056222 Murru_3369 Muricauda ruestringensis DSM 13258 anti-FecI sigma factor FecR YP_004789805.1 3731491 R 886377 CDS YP_004789806.1 344204663 11056223 3732743..3733291 1 NC_015945.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: zpr:ZPR_0388 ECF subfamily RNA polymerase sigma-24 factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 3733291 11056223 Murru_3370 Muricauda ruestringensis DSM 13258 ECF subfamily RNA polymerase sigma-24 subunit YP_004789806.1 3732743 D 886377 CDS YP_004789807.1 344204664 11056224 3733414..3733989 1 NC_015945.1 PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family; COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR002818:IPR006286; KEGG: maq:Maqu_2946 PfpI family intracellular peptidase; PFAM: ThiJ/PfpI; SPTR: ThiJ/PfpI family protein; TIGRFAM: Peptidase C56, PfpI; Pfpi family intracellular protease 3733989 11056224 Murru_3371 Muricauda ruestringensis DSM 13258 Pfpi family intracellular protease YP_004789807.1 3733414 D 886377 CDS YP_004789808.1 344204665 11056225 complement(3734211..3734327) 1 NC_015945.1 hypothetical protein 3734327 11056225 Murru_3372 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789808.1 3734211 R 886377 CDS YP_004789809.1 344204666 11056226 3734367..3736745 1 NC_015945.1 PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_11121 putative outer membrane protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Outer membrane protein; TonB-dependent receptor 3736745 11056226 Murru_3373 Muricauda ruestringensis DSM 13258 TonB-dependent receptor YP_004789809.1 3734367 D 886377 CDS YP_004789810.1 344204667 11056227 3736750..3737592 1 NC_015945.1 KEGG: fbc:FB2170_11126 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3737592 11056227 Murru_3374 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789810.1 3736750 D 886377 CDS YP_004789811.1 344204668 11056228 3737673..3738020 1 NC_015945.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain; COGs: COG2005 N-terminal domain of molybdenum-binding protein; InterPro IPR000847; KEGG: dfe:Dfer_5342 putative transcriptional regulator, ModE family; PFAM: HTH transcriptional regulator, LysR; SPTR: Putative transcriptional regulator, ModE family; putative ModE family transcriptional regulator 3738020 11056228 Murru_3375 Muricauda ruestringensis DSM 13258 putative ModE family transcriptional regulator YP_004789811.1 3737673 D 886377 CDS YP_004789812.1 344204669 11056229 complement(3738017..3738772) 1 NC_015945.1 PFAM: Sulfite exporter TauE/SafE; InterPro IPR002781; KEGG: gfo:GFO_0456 hypothetical protein; PFAM: Protein of unknown function DUF81; SPTR: Membrane protein; hypothetical protein 3738772 11056229 Murru_3376 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789812.1 3738017 R 886377 CDS YP_004789813.1 344204670 11056230 complement(3738776..3739942) 1 NC_015945.1 PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain; COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR005110:IPR001453:IPR005111:IPR020817; KEGG: gfo:GFO_0455 molybdopterin biosynthesis protein MoeA; PFAM: MoeA, N-terminal and linker domain; Molybdopterin binding; MoeA, C-terminal, domain IV; SMART: Molybdopterin binding; SPTR: Molybdopterin biosynthesis protein moeA; TIGRFAM: Molybdenum cofactor synthesis; molybdenum cofactor synthesis domain-containing protein 3739942 11056230 Murru_3377 Muricauda ruestringensis DSM 13258 molybdenum cofactor synthesis domain-containing protein YP_004789813.1 3738776 R 886377 CDS YP_004789814.1 344204671 11056231 complement(3739942..3740934) 1 NC_015945.1 PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial; COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterPro IPR007197:IPR010505:IPR006638:IPR013483; KEGG: gfo:GFO_0454 molybdopterin biosynthesis MoaA protein; PFAM: Radical SAM; Molybdenum cofactor synthesis C-terminal; SMART: Elongator protein 3/MiaB/NifB; SPTR: Molybdopterin biosynthesis MoaA protein; TIGRFAM: Molybdenum cofactor biosynthesis protein A; molybdenum cofactor biosynthesis protein A 3740934 11056231 Murru_3378 Muricauda ruestringensis DSM 13258 molybdenum cofactor biosynthesis protein A YP_004789814.1 3739942 R 886377 CDS YP_004789815.1 344204672 11056232 complement(3740927..3741823) 1 NC_015945.1 PFAM: MoaC family; Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC; molybdenum cofactor synthesis domain; COGs: COG0315 Molybdenum cofactor biosynthesis enzyme; InterPro IPR002820:IPR001453:IPR020817; KEGG: gfo:GFO_0453 bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA; PFAM: Molybdopterin cofactor biosynthesis C (MoaC) domain; Molybdopterin binding; SMART: Molybdopterin binding; SPTR: Molybdenum cofactor biosynthesis bifunctional protein; TIGRFAM: Molybdenum cofactor synthesis; molybdenum cofactor synthesis domain-containing protein 3741823 11056232 Murru_3379 Muricauda ruestringensis DSM 13258 molybdenum cofactor synthesis domain-containing protein YP_004789815.1 3740927 R 886377 CDS YP_004789816.1 344204673 11056233 complement(3741824..3742267) 1 NC_015945.1 PFAM: MoaE protein; COGs: COG0314 Molybdopterin converting factor large subunit; InterPro IPR003448; KEGG: gfo:GFO_0452 molybdopterin converting factor subunit 2; PFAM: Molybdopterin biosynthesis MoaE; SPTR: Molybdopterin converting factor subunit 2; molybdopterin biosynthesis protein MoaE 3742267 11056233 Murru_3380 Muricauda ruestringensis DSM 13258 molybdopterin biosynthesis protein MoaE YP_004789816.1 3741824 R 886377 CDS YP_004789817.1 344204674 11056234 complement(3742260..3743273) 1 NC_015945.1 PFAM: MoeZ/MoeB domain; Rhodanese-like domain; ThiF family; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594:IPR007901; KEGG: gfo:GFO_0451 molybdenum cofactor biosynthesis protein; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; SPTR: Molybdenum cofactor biosynthesis protein; UBA/THIF-type NAD/FAD binding protein 3743273 11056234 Murru_3381 Muricauda ruestringensis DSM 13258 UBA/THIF-type NAD/FAD binding protein YP_004789817.1 3742260 R 886377 CDS YP_004789818.1 344204675 11056235 complement(3743270..3743506) 1 NC_015945.1 PFAM: ThiS family; InterPro IPR003749; KEGG: gfo:GFO_0450 molybdopterin cofactor biosynthesis protein; PFAM: ThiamineS; SPTR: Molybdopterin cofactor biosynthesis protein; sulfur carrier protein ThiS 3743506 11056235 Murru_3382 Muricauda ruestringensis DSM 13258 sulfur carrier protein ThiS YP_004789818.1 3743270 R 886377 CDS YP_004789819.1 344204676 11056236 complement(3743503..3744108) 1 NC_015945.1 PFAM: Uncharacterized protein family UPF0007; COGs: COG2068 Uncharacterized MobA-related protein; InterPro IPR001228; KEGG: gfo:GFO_0449 MobA-like molybdenum cofactor biosynthesis protein; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; SPTR: MobA-like molybdenum cofactor biosynthesis protein; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 3744108 11056236 Murru_3383 Muricauda ruestringensis DSM 13258 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_004789819.1 3743503 R 886377 CDS YP_004789820.1 344204677 11056237 complement(3744105..3745259) 1 NC_015945.1 PFAM: XdhC and CoxI family; COGs: COG1975 Xanthine and CO dehydrogenase maturation factor XdhC/CoxF family; InterPro IPR003777; KEGG: gfo:GFO_0448 XdhC/CoxI type molybdenum-dependent oxidoreductase accessory protein; PFAM: XdhC- CoxI; PRIAM: Xanthine dehydrogenase; SPTR: XdhC/CoxI type molybdenum-dependent oxidoreductase accessory protein; xanthine dehydrogenase 3745259 11056237 Murru_3384 Muricauda ruestringensis DSM 13258 xanthine dehydrogenase YP_004789820.1 3744105 R 886377 CDS YP_004789821.1 344204678 11056238 complement(3745256..3746410) 1 NC_015945.1 PFAM: Aminotransferase class-V; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: gfo:GFO_0447 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Cysteine desulfurase; cysteine desulfurase 3746410 11056238 Murru_3385 Muricauda ruestringensis DSM 13258 cysteine desulfurase YP_004789821.1 3745256 R 886377 CDS YP_004789822.1 344204679 11056239 3746562..3746891 1 NC_015945.1 PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: cat:CA2559_00475 transcriptional regulator, ArsR family protein; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family protein; regulatory protein ArsR 3746891 11056239 Murru_3386 Muricauda ruestringensis DSM 13258 regulatory protein ArsR YP_004789822.1 3746562 D 886377 CDS YP_004789823.1 344204680 11056240 3746940..3747407 1 NC_015945.1 KEGG: cat:CA2559_00480 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3747407 11056240 Murru_3387 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789823.1 3746940 D 886377 CDS YP_004789824.1 344204681 11056241 3747707..3748324 1 NC_015945.1 KEGG: fjo:Fjoh_3082 protein tyrosine phosphatase; SPTR: Probable arsenate reductase; protein tyrosine phosphatase 3748324 11056241 Murru_3388 Muricauda ruestringensis DSM 13258 protein tyrosine phosphatase YP_004789824.1 3747707 D 886377 CDS YP_004789825.1 344204682 11056242 3748324..3749376 1 NC_015945.1 PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein; COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR002657:IPR004706; KEGG: cat:CA2559_00490 arsenical-resistance protein; PFAM: Bile acid:sodium symporter; SPTR: Arsenite efflux transporter; TIGRFAM: Arsenical-resistance protein ACR3; arsenical-resistance protein 3749376 11056242 Murru_3389 Muricauda ruestringensis DSM 13258 arsenical-resistance protein YP_004789825.1 3748324 D 886377 CDS YP_004789826.1 344204683 11056243 3749455..3750399 1 NC_015945.1 PFAM: WD40-like Beta Propeller Repeat; COGs: COG0823 Periplasmic component of the Tol biopolymer transport system; InterPro IPR011659; KEGG: rbi:RB2501_12022 TolB protein; PFAM: WD40-like Beta Propeller; SPTR: TolB protein; WD40-like beta Propeller containing protein 3750399 11056243 Murru_3390 Muricauda ruestringensis DSM 13258 WD40-like beta Propeller containing protein YP_004789826.1 3749455 D 886377 CDS YP_004789827.1 344204684 11056244 complement(3750410..3750703) 1 NC_015945.1 hypothetical protein 3750703 11056244 Murru_3391 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789827.1 3750410 R 886377 CDS YP_004789828.1 344204685 11056245 3750899..3751843 1 NC_015945.1 KEGG: rbi:RB2501_14159 putative lipoprotein; SPTR: Probable lipoprotein; putative lipoprotein 3751843 11056245 Murru_3392 Muricauda ruestringensis DSM 13258 putative lipoprotein YP_004789828.1 3750899 D 886377 CDS YP_004789829.1 344204686 11056246 complement(3752058..3753248) 1 NC_015945.1 PFAM: Redoxin; InterPro IPR000866; KEGG: phe:Phep_1078 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; alkyl hydroperoxide reductase 3753248 11056246 Murru_3393 Muricauda ruestringensis DSM 13258 alkyl hydroperoxide reductase YP_004789829.1 3752058 R 886377 CDS YP_004789830.1 344204687 11056247 3753393..3753776 1 NC_015945.1 InterPro IPR011637; KEGG: sli:Slin_2514 hypothetical protein; PFAM: Uncharacterised protein family YphA; SPTR: Putative uncharacterized protein; DoxX family protein 3753776 11056247 Murru_3394 Muricauda ruestringensis DSM 13258 DoxX family protein YP_004789830.1 3753393 D 886377 CDS YP_004789831.1 344204688 11056248 3753924..3754715 1 NC_015945.1 hypothetical protein 3754715 11056248 Murru_3395 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789831.1 3753924 D 886377 CDS YP_004789832.1 344204689 11056249 3754948..3755298 1 NC_015945.1 PFAM: Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; export-related chaperone CsaA; COGs: COG0073 EMAP domain; InterPro IPR002547:IPR008231; KEGG: chu:CHU_3785 methionine--tRNA ligase (methionine tRNA synthetase); PFAM: tRNA-binding domain; SPTR: Methionine--tRNA ligase (Methionine tRNA synthetase); TIGRFAM: Secretion chaperone CsaA; export-related chaperone CsaA 3755298 11056249 Murru_3396 Muricauda ruestringensis DSM 13258 export-related chaperone CsaA YP_004789832.1 3754948 D 886377 CDS YP_004789833.1 344204690 11056251 complement(3755657..3757153) 1 NC_015945.1 PFAM: Sulfate transporter family; STAS domain; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547; KEGG: cat:CA2559_12953 sulfate permease family protein; PFAM: Sulphate transporter; SPTR: Sulfate permease family protein; sulfate transporter 3757153 11056251 Murru_3398 Muricauda ruestringensis DSM 13258 sulfate transporter YP_004789833.1 3755657 R 886377 CDS YP_004789834.1 344204691 11056252 complement(3757480..3758952) 1 NC_015945.1 PFAM: Sodium/hydrogen exchanger family; TrkA-C domain; COGs: COG3263 NhaP-type Na+/H+ and K+/H+ antiporter with a unique C-terminal domain; InterPro IPR006153:IPR006037; KEGG: rbi:RB2501_13614 cell volume regulation protein CvrA; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, C-terminal; SPTR: Sodium/hydrogen exchanger family/TrkA domain protein; sodium/hydrogen exchanger 3758952 11056252 Murru_3399 Muricauda ruestringensis DSM 13258 sodium/hydrogen exchanger YP_004789834.1 3757480 R 886377 CDS YP_004789835.1 344204692 11056253 3759342..3760190 1 NC_015945.1 PFAM: WD40-like Beta Propeller Repeat; InterPro IPR011659; KEGG: rbi:RB2501_14229 OmpA family protein; PFAM: WD40-like Beta Propeller; SPTR: OmpA family protein; WD40-like beta Propeller containing protein 3760190 11056253 Murru_3400 Muricauda ruestringensis DSM 13258 WD40-like beta Propeller containing protein YP_004789835.1 3759342 D 886377 CDS YP_004789836.1 344204693 11056254 3760867..3761511 1 NC_015945.1 PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: fbc:FB2170_15028 DNA-binding response regulator, LuxR family protein; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SPTR: DNA-binding response regulator, LuxR family protein; two component LuxR family transcriptional regulator 3761511 11056254 Murru_3401 Muricauda ruestringensis DSM 13258 two component LuxR family transcriptional regulator YP_004789836.1 3760867 D 886377 CDS YP_004789837.1 344204694 11056255 complement(3761638..3763566) 1 NC_015945.1 PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; COGs: COG0443 Molecular chaperone; HAMAP: Chaperone DnaK; InterPro IPR013126:IPR012725; KEGG: fbc:FB2170_12941 molecular chaperone DnaK; PFAM: Heat shock protein 70; SPTR: Chaperone protein dnaK; TIGRFAM: Chaperone DnaK; chaperone protein dnaK 3763566 11056255 Murru_3402 Muricauda ruestringensis DSM 13258 chaperone protein dnaK YP_004789837.1 3761638 R 886377 CDS YP_004789838.1 344204695 11056256 3763799..3765223 1 NC_015945.1 PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form; COGs: COG1760 L-serine deaminase; InterPro IPR005131:IPR005130:IPR004644; KEGG: fbc:FB2170_12951 L-serine dehydratase; PFAM: Serine dehydratase-like, alpha subunit; Serine dehydratase beta chain; PRIAM: L-serine ammonia-lyase; SPTR: L-serine dehydratase; TIGRFAM: Iron-sulphur-dependent L-serine dehydratase single chain form; L-serine dehydratase 1 3765223 11056256 Murru_3403 Muricauda ruestringensis DSM 13258 L-serine dehydratase 1 YP_004789838.1 3763799 D 886377 CDS YP_004789839.1 344204696 11056257 complement(3765220..3765699) 1 NC_015945.1 KEGG: fbc:FB2170_13106 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3765699 11056257 Murru_3404 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789839.1 3765220 R 886377 CDS YP_004789840.1 344204697 11056258 3765770..3766588 1 NC_015945.1 PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; COGs: COG0413 Ketopantoate hydroxymethyltransferase; HAMAP: Ketopantoate hydroxymethyltransferase; InterPro IPR003700; KEGG: fbc:FB2170_13111 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; PRIAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; SPTR: 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3766588 11056258 Murru_3405 Muricauda ruestringensis DSM 13258 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_004789840.1 3765770 D 886377 CDS YP_004789841.1 344204698 11056259 3766763..3767488 1 NC_015945.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: fbc:FB2170_13121 putative ribosomal large subunit pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Putative ribosomal large subunit pseudouridine synthase; pseudouridine synthase 3767488 11056259 Murru_3406 Muricauda ruestringensis DSM 13258 pseudouridine synthase YP_004789841.1 3766763 D 886377 CDS YP_004789842.1 344204699 11056261 3769095..3770342 1 NC_015945.1 PFAM: HMGL-like; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891; KEGG: rbi:RB2501_15799 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; PRIAM: 2-isopropylmalate synthase; SPTR: 2-isopropylmalate synthase; 2-isopropylmalate synthase 3770342 11056261 Murru_3408 Muricauda ruestringensis DSM 13258 2-isopropylmalate synthase YP_004789842.1 3769095 D 886377 CDS YP_004789843.1 344204700 11056262 3770360..3771478 1 NC_015945.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; HAMAP: Isopropylmalate dehydrogenase; InterPro IPR001804:IPR004429; KEGG: rbi:RB2501_15804 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; PRIAM: 3-isopropylmalate dehydrogenase; SPTR: 3-isopropylmalate dehydrogenase; TIGRFAM: Isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 3771478 11056262 Murru_3409 Muricauda ruestringensis DSM 13258 3-isopropylmalate dehydrogenase YP_004789843.1 3770360 D 886377 CDS YP_004789844.1 344204701 11056263 complement(3771812..3773056) 1 NC_015945.1 PFAM: Redoxin; InterPro IPR013740; KEGG: fbc:FB2170_13151 phenylalanyl-tRNA synthetase subunit beta; PFAM: Redoxin; SPTR: Phenylalanyl-tRNA synthetase beta subunit; redoxin domain-containing protein 3773056 11056263 Murru_3410 Muricauda ruestringensis DSM 13258 redoxin domain-containing protein YP_004789844.1 3771812 R 886377 CDS YP_004789845.1 344204702 11056264 3773186..3775597 1 NC_015945.1 PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; InterProIPR002547:IPR005146:IPR005147:IPR005121:IPR 004532; KEGG: fbc:FB2170_13156 phenylalanyl-tRNA synthetase subunit beta; PFAM: B3/B4 tRNA-binding domain; tRNA-binding domain; tRNA synthetase, B5; Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding; SMART: B3/B4 tRNA-binding domain; tRNA synthetase, B5; Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding; SPTR: Phenylalanyl-tRNA synthetase beta subunit; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; phenylalanyl-tRNA synthetase subunit beta 3775597 11056264 Murru_3411 Muricauda ruestringensis DSM 13258 phenylalanyl-tRNA synthetase subunit beta YP_004789845.1 3773186 D 886377 CDS YP_004789846.1 344204703 11056265 complement(3775598..3776128) 1 NC_015945.1 PFAM: Fasciclin domain; COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: fbc:FB2170_13161 hypothetical protein; PFAM: FAS1 domain; SMART: FAS1 domain; SPTR: Putative uncharacterized protein; beta-Ig-H3/fasciclin 3776128 11056265 Murru_3412 Muricauda ruestringensis DSM 13258 beta-Ig-H3/fasciclin YP_004789846.1 3775598 R 886377 CDS YP_004789847.1 344204704 11056266 3776346..3777059 1 NC_015945.1 KEGG: rbi:RB2501_15819 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3777059 11056266 Murru_3413 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789847.1 3776346 D 886377 CDS YP_004789848.1 344204705 11056267 complement(3777056..3778684) 1 NC_015945.1 PFAM: ABC transporter; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439:IPR003593; KEGG: fbc:FB2170_13171 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; ABC transporter-like protein 3778684 11056267 Murru_3414 Muricauda ruestringensis DSM 13258 ABC transporter-like protein YP_004789848.1 3777056 R 886377 CDS YP_004789849.1 344204706 11056268 3778838..3780244 1 NC_015945.1 InterPro IPR000866; KEGG: fbc:FB2170_13176 transaldolase; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Transaldolase; alkyl hydroperoxide reductase 3780244 11056268 Murru_3415 Muricauda ruestringensis DSM 13258 alkyl hydroperoxide reductase YP_004789849.1 3778838 D 886377 CDS YP_004789850.1 344204707 11056269 complement(3780304..3780960) 1 NC_015945.1 PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family; COGs: COG0176 Transaldolase; HAMAP: Transaldolase 3B, putative; InterPro IPR001585:IPR022999:IPR004731; KEGG: fbc:FB2170_13181 transaldolase; PFAM: Transaldolase; SPTR: Probable transaldolase; TIGRFAM: Transaldolase 3A/3B; transaldolase 3780960 11056269 Murru_3416 Muricauda ruestringensis DSM 13258 transaldolase YP_004789850.1 3780304 R 886377 CDS YP_004789851.1 344204708 11056270 complement(3781000..3781809) 1 NC_015945.1 PFAM: short chain dehydrogenase; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: fbc:FB2170_13186 putative oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Putative oxidoreductase; short-chain dehydrogenase/reductase SDR 3781809 11056270 Murru_3417 Muricauda ruestringensis DSM 13258 short-chain dehydrogenase/reductase SDR YP_004789851.1 3781000 R 886377 CDS YP_004789852.1 344204709 11056272 3782265..3783308 1 NC_015945.1 PFAM: Glutamine cyclotransferase; COGs: COG3823 Glutamine cyclotransferase; InterPro IPR007788; KEGG: fbc:FB2170_13191 glutamine cyclotransferase; PFAM: Glutamine cyclotransferase; SPTR: Glutamine cyclotransferase; glutamine cyclotransferase 3783308 11056272 Murru_3418 Muricauda ruestringensis DSM 13258 glutamine cyclotransferase YP_004789852.1 3782265 D 886377 CDS YP_004789853.1 344204710 11056273 3783308..3783697 1 NC_015945.1 PFAM: Acyl-ACP thioesterase; COGs: COG0824 thioesterase; KEGG: fbc:FB2170_13196 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3783697 11056273 Murru_3419 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789853.1 3783308 D 886377 CDS YP_004789854.1 344204711 11056274 3783929..3784063 1 NC_015945.1 hypothetical protein 3784063 11056274 Murru_3420 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789854.1 3783929 D 886377 CDS YP_004789855.1 344204712 11056275 3784067..3785317 1 NC_015945.1 KEGG: zpr:ZPR_1052 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3785317 11056275 Murru_3421 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789855.1 3784067 D 886377 CDS YP_004789856.1 344204713 11056276 3785366..3787303 1 NC_015945.1 KEGG: coc:Coch_0510 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3787303 11056276 Murru_3422 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789856.1 3785366 D 886377 CDS YP_004789857.1 344204714 11056277 3787305..3788486 1 NC_015945.1 KEGG: bca:BCE_3220 sterol-regulatory element binding protein (SREBP) site 2 protease family protein; SPTR: Putative uncharacterized protein; hypothetical protein 3788486 11056277 Murru_3423 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789857.1 3787305 D 886377 CDS YP_004789858.1 344204715 11056278 3788458..3789225 1 NC_015945.1 KEGG: fbc:FB2170_16601 putative outer membrane protein; SPTR: Putative uncharacterized protein; putative outer membrane protein 3789225 11056278 Murru_3424 Muricauda ruestringensis DSM 13258 putative outer membrane protein YP_004789858.1 3788458 D 886377 CDS YP_004789859.1 344204716 11056279 3789740..3790474 1 NC_015945.1 PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR007492; KEGG: fbc:FB2170_13216 LytTr DNA-binding response regulator; PFAM: LytTr, DNA-binding domain; SMART: LytTr, DNA-binding domain; SPTR: LytTr DNA-binding response regulator; LytTR family two component transcriptional regulator 3790474 11056279 Murru_3425 Muricauda ruestringensis DSM 13258 LytTR family two component transcriptional regulator YP_004789859.1 3789740 D 886377 CDS YP_004789860.1 344204717 11056280 3790613..3790786 1 NC_015945.1 hypothetical protein 3790786 11056280 Murru_3426 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789860.1 3790613 D 886377 CDS YP_004789861.1 344204718 11056281 3791147..3793207 1 NC_015945.1 PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: fbc:FB2170_13226 putative transmembrane protein; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Putative transmembrane protein; putative signal transduction histidine kinase 3793207 11056281 Murru_3427 Muricauda ruestringensis DSM 13258 putative signal transduction histidine kinase YP_004789861.1 3791147 D 886377 CDS YP_004789862.1 344204719 11056282 3793236..3793904 1 NC_015945.1 PFAM: Response regulator receiver domain; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789; KEGG: rbi:RB2501_15869 hypothetical protein; PFAM: Signal transduction response regulator, receiver domain; SPTR: Putative uncharacterized protein; response regulator receiver protein 3793904 11056282 Murru_3428 Muricauda ruestringensis DSM 13258 response regulator receiver protein YP_004789862.1 3793236 D 886377 CDS YP_004789863.1 344204720 11056283 3794080..3794748 1 NC_015945.1 KEGG: rbi:RB2501_15874 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3794748 11056283 Murru_3429 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789863.1 3794080 D 886377 CDS YP_004789864.1 344204721 11056284 complement(3794765..3796039) 1 NC_015945.1 PFAM: Serine hydroxymethyltransferase; COGs: COG0112 Glycine/serine hydroxymethyltransferase; InterPro IPR001085; KEGG: fbc:FB2170_13241 serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; PRIAM: Glycine hydroxymethyltransferase; SPTR: Serine hydroxymethyltransferase; glycine hydroxymethyltransferase 3796039 11056284 Murru_3430 Muricauda ruestringensis DSM 13258 glycine hydroxymethyltransferase YP_004789864.1 3794765 R 886377 CDS YP_004789865.1 344204722 11056285 3796294..3797478 1 NC_015945.1 KEGG: fbc:FB2170_13251 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3797478 11056285 Murru_3431 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789865.1 3796294 D 886377 CDS YP_004789866.1 344204723 11056286 complement(3797560..3797949) 1 NC_015945.1 PFAM: Protein of unknown function (DUF2847); TIGRFAM: bacillithiol system protein YtxJ; KEGG: gfo:GFO_2264 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3797949 11056286 Murru_3432 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789866.1 3797560 R 886377 CDS YP_004789867.1 344204724 11056287 3798092..3800692 1 NC_015945.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR004176:IPR003959:IPR013093:IPR019489:IPR 003593:IPR017730; KEGG: fbc:FB2170_13261 putative heat shock ClpB protein; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: Putative heat shock ClpB protein; TIGRFAM: Chaperonin ClpB; ATP-dependent chaperone ClpB 3800692 11056287 Murru_3433 Muricauda ruestringensis DSM 13258 ATP-dependent chaperone ClpB YP_004789867.1 3798092 D 886377 CDS YP_004789868.1 344204725 11056288 3800987..3802300 1 NC_015945.1 PFAM: GntP family permease; TIGRFAM: gluconate transporter; COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: fbc:FB2170_08009 putative gluconate permease; PFAM: Gluconate transporter; SPTR: Putative gluconate permease; TIGRFAM: Gluconate transporter; gluconate transporter 3802300 11056288 Murru_3434 Muricauda ruestringensis DSM 13258 gluconate transporter YP_004789868.1 3800987 D 886377 CDS YP_004789869.1 344204726 11056289 3802312..3802779 1 NC_015945.1 PFAM: Endoribonuclease L-PSP; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: fbc:FB2170_08004 putative translation initiation inhibitor; PFAM: Endoribonuclease L-PSP; SPTR: Putative translation initiation inhibitor; endoribonuclease L-PSP 3802779 11056289 Murru_3435 Muricauda ruestringensis DSM 13258 endoribonuclease L-PSP YP_004789869.1 3802312 D 886377 CDS YP_004789870.1 344204727 11056290 3802789..3803853 1 NC_015945.1 PFAM: Membrane dipeptidase (Peptidase family M19); COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR008257; KEGG: fbc:FB2170_07994 putative peptidase; PFAM: Peptidase M19, renal dipeptidase; SPTR: Putative peptidase; peptidase M19 3803853 11056290 Murru_3436 Muricauda ruestringensis DSM 13258 peptidase M19 YP_004789870.1 3802789 D 886377 CDS YP_004789871.1 344204728 11056291 3804026..3804640 1 NC_015945.1 PFAM: Bacterial regulatory proteins, tetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: fbc:FB2170_13266 hypothetical protein; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Putative uncharacterized protein; TetR family transcriptional regulator 3804640 11056291 Murru_3437 Muricauda ruestringensis DSM 13258 TetR family transcriptional regulator YP_004789871.1 3804026 D 886377 CDS YP_004789872.1 344204729 11056292 3804688..3805125 1 NC_015945.1 PFAM: Acyl-ACP thioesterase; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; COGs: COG0824 thioesterase; InterPro IPR002864; KEGG: ppr:PBPRB1178 putative thioesterase; PFAM: Acyl-ACP thioesterase; SPTR: Putative thioesterase; acyl-ACP thioesterase 3805125 11056292 Murru_3438 Muricauda ruestringensis DSM 13258 acyl-ACP thioesterase YP_004789872.1 3804688 D 886377 CDS YP_004789873.1 344204730 11056293 complement(3805269..3806672) 1 NC_015945.1 PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: rbi:RB2501_15909 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein 3806672 11056293 Murru_3439 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789873.1 3805269 R 886377 CDS YP_004789874.1 344204731 11056294 3806745..3807269 1 NC_015945.1 PFAM: Phosphoglycerate mutase family; InterPro IPR013078; KEGG: fbc:FB2170_13276 hypothetical protein; PFAM: Histidine phosphatase superfamily, clade-1; SPTR: Putative uncharacterized protein; phosphoglycerate mutase 3807269 11056294 Murru_3440 Muricauda ruestringensis DSM 13258 phosphoglycerate mutase YP_004789874.1 3806745 D 886377 CDS YP_004789875.1 344204732 11056295 complement(3807266..3808045) 1 NC_015945.1 KEGG: fbc:FB2170_13281 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3808045 11056295 Murru_3441 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789875.1 3807266 R 886377 CDS YP_004789876.1 344204733 11056296 3808090..3808551 1 NC_015945.1 PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; COGs: COG0691 tmRNA-binding protein; HAMAP: SsrA-binding protein; InterPro IPR000037; KEGG: fbc:FB2170_13286 SsrA-binding protein; PFAM: SsrA-binding protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; SsrA-binding protein 3808551 11056296 Murru_3442 Muricauda ruestringensis DSM 13258 SsrA-binding protein YP_004789876.1 3808090 D 886377 CDS YP_004789877.1 344204734 11056297 complement(3808999..3809640) 1 NC_015945.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; COGs: COG2518 Protein-L-isoaspartate carboxylmethyltransferase; HAMAP: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; InterPro IPR000682; KEGG: fbc:FB2170_13291 hypothetical protein; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; PRIAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; SPTR: Protein-L-isoaspartate O-methyltransferase; TIGRFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase 3809640 11056297 Murru_3443 Muricauda ruestringensis DSM 13258 protein-L-isoaspartate O-methyltransferase YP_004789877.1 3808999 R 886377 CDS YP_004789878.1 344204735 11056298 3809755..3810720 1 NC_015945.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: fbc:FB2170_13296 Gfo/Idh/MocA family oxidoreductase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase, Gfo/Idh/MocA family protein; oxidoreductase domain-containing protein 3810720 11056298 Murru_3444 Muricauda ruestringensis DSM 13258 oxidoreductase domain-containing protein YP_004789878.1 3809755 D 886377 CDS YP_004789879.1 344204736 11056299 3810779..3811666 1 NC_015945.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176:IPR006108; KEGG: fbc:FB2170_13301 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; PRIAM: 3-hydroxybutyryl-CoA dehydrogenase; SPTR: 3-hydroxybutyryl-CoA dehydrogenase; 3-hydroxybutyryl-CoA dehydrogenase 3811666 11056299 Murru_3445 Muricauda ruestringensis DSM 13258 3-hydroxybutyryl-CoA dehydrogenase YP_004789879.1 3810779 D 886377 CDS YP_004789880.1 344204737 11056300 3811852..3813087 1 NC_015945.1 PFAM: Protein of unknown function (DUF1015); COGs: COG4198 conserved hypothetical protein; InterPro IPR008323; KEGG: fbc:FB2170_13306 hypothetical protein; PFAM: Uncharacterised conserved protein UCP033563; SPTR: Putative uncharacterized protein; hypothetical protein 3813087 11056300 Murru_3446 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789880.1 3811852 D 886377 CDS YP_004789881.1 344204738 11056301 3813202..3813339 1 NC_015945.1 hypothetical protein 3813339 11056301 Murru_3447 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789881.1 3813202 D 886377 CDS YP_004789882.1 344204739 11056302 3813385..3814044 1 NC_015945.1 PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family; COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR001608:IPR011078; KEGG: fbc:FB2170_13311 hypothetical protein; PFAM: Alanine racemase, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; hypothetical protein 3814044 11056302 Murru_3448 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789882.1 3813385 D 886377 CDS YP_004789883.1 344204740 11056303 3814059..3815393 1 NC_015945.1 PFAM: Exonuclease; GIY-YIG catalytic domain; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR013520:IPR000305:IPR006055:IPR006054; KEGG: fbc:FB2170_13316 DNA polymerase III subunit epsilon; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal; PRIAM: DNA-directed DNA polymerase; SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; SPTR: DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; DNA polymerase III subunit epsilon 3815393 11056303 Murru_3449 Muricauda ruestringensis DSM 13258 DNA polymerase III subunit epsilon YP_004789883.1 3814059 D 886377 CDS YP_004789884.1 344204741 11056304 3815397..3816245 1 NC_015945.1 PFAM: Ion transport protein; InterPro IPR005821; KEGG: rbi:RB2501_15964 potassium channel protein; PFAM: Ion transport; SPTR: Potassium channel protein; Ion transport protein 3816245 11056304 Murru_3450 Muricauda ruestringensis DSM 13258 Ion transport protein YP_004789884.1 3815397 D 886377 CDS YP_004789885.1 344204742 11056305 3816242..3817165 1 NC_015945.1 PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase; COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA delta(2)-isopentenylpyrophosphate transferase; InterPro IPR002627:IPR018022; KEGG: fbc:FB2170_13326 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; PRIAM: tRNA isopentenyltransferase; SPTR: tRNA dimethylallyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; tRNA dimethylallyltransferase 3817165 11056305 Murru_3451 Muricauda ruestringensis DSM 13258 tRNA dimethylallyltransferase YP_004789885.1 3816242 D 886377 CDS YP_004789886.1 344204743 11056306 3817158..3817649 1 NC_015945.1 PFAM: Shikimate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; COGs: COG3265 Gluconate kinase; InterPro IPR000623:IPR006001; KEGG: fbc:FB2170_13331 putative D-gluconate kinase; PFAM: Shikimate kinase; PRIAM: Gluconokinase; SPTR: Putative D-gluconate kinase active at low temperature (Idonate catabolism); TIGRFAM: Carbohydrate kinase, thermoresistant glucokinase; thermoresistant glucokinase family carbohydrate kinase 3817649 11056306 Murru_3452 Muricauda ruestringensis DSM 13258 thermoresistant glucokinase family carbohydrate kinase YP_004789886.1 3817158 D 886377 CDS YP_004789887.1 344204744 11056307 complement(3817705..3818421) 1 NC_015945.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: fbc:FB2170_13336 two-component system transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SPTR: Two-component system, transcriptional regulatory protein; two component winged helix family transcriptional regulator 3818421 11056307 Murru_3453 Muricauda ruestringensis DSM 13258 two component winged helix family transcriptional regulator YP_004789887.1 3817705 R 886377 CDS YP_004789888.1 344204745 11056308 complement(3818431..3820014) 1 NC_015945.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG5002 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: fbc:FB2170_13341 two-component system sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Two-component system sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 3820014 11056308 Murru_3454 Muricauda ruestringensis DSM 13258 integral membrane sensor signal transduction histidine kinase YP_004789888.1 3818431 R 886377 CDS YP_004789889.1 344204746 11056309 complement(3820079..3820672) 1 NC_015945.1 PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; COGs: COG0237 Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; InterPro IPR001977; KEGG: fbc:FB2170_13346 putative dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; PRIAM: Dephospho-CoA kinase; SPTR: Putative dephospho-CoA kinase; TIGRFAM: Dephospho-CoA kinase; dephospho-CoA kinase 3820672 11056309 Murru_3455 Muricauda ruestringensis DSM 13258 dephospho-CoA kinase YP_004789889.1 3820079 R 886377 CDS YP_004789890.1 344204747 11056310 complement(3820669..3821610) 1 NC_015945.1 PFAM: YbbR-like protein; InterPro IPR012505; KEGG: fbc:FB2170_13351 hypothetical protein; PFAM: YbbR-like; SPTR: Putative uncharacterized protein; hypothetical protein 3821610 11056310 Murru_3456 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789890.1 3820669 R 886377 CDS YP_004789891.1 344204748 11056311 complement(3821628..3822629) 1 NC_015945.1 PFAM: Glycosyl transferase family 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: fbc:FB2170_13356 glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyltransferase; family 2 glycosyl transferase 3822629 11056311 Murru_3457 Muricauda ruestringensis DSM 13258 family 2 glycosyl transferase YP_004789891.1 3821628 R 886377 CDS YP_004789892.1 344204749 11056312 complement(3822763..3823605) 1 NC_015945.1 COGs: COG0623 Enoyl-(acyl-carrier-protein); KEGG: rbi:RB2501_16004 enoyl-[acyl-carrier-protein] reductase; PRIAM: Enoyl-[acyl-carrier-protein] reductase (NADH); SPTR: Enoyl-[acyl-carrier-protein] reductase; enoyl-ACP reductase 3823605 11056312 Murru_3458 Muricauda ruestringensis DSM 13258 enoyl-ACP reductase YP_004789892.1 3822763 R 886377 CDS YP_004789893.1 344204750 11056313 complement(3823774..3825426) 1 NC_015945.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN; COGs: COG0497 ATPase involved in DNA repair; InterPro IPR003395:IPR004604; KEGG: fbc:FB2170_13366 DNA repair protein; PFAM: RecF/RecN/SMC; SPTR: DNA repair protein; TIGRFAM: DNA recombination/repair protein RecN; DNA repair protein RecN 3825426 11056313 Murru_3459 Muricauda ruestringensis DSM 13258 DNA repair protein RecN YP_004789893.1 3823774 R 886377 CDS YP_004789894.1 344204751 11056314 complement(3825473..3826363) 1 NC_015945.1 KEGG: fbc:FB2170_13371 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3826363 11056314 Murru_3460 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789894.1 3825473 R 886377 CDS YP_004789895.1 344204752 11056315 complement(3826356..3827561) 1 NC_015945.1 PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic; COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR003382:IPR007085:IPR005252; KEGG: fbc:FB2170_13376 flavoprotein; PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein; PRIAM: Phosphopantothenate--cysteine ligase; SPTR: Flavoprotein; TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 3827561 11056315 Murru_3461 Muricauda ruestringensis DSM 13258 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_004789895.1 3826356 R 886377 CDS YP_004789896.1 344204753 11056316 complement(3827565..3827891) 1 NC_015945.1 PFAM: RNA polymerase Rpb6; KEGG: rbi:RB2501_16024 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3827891 11056316 Murru_3462 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789896.1 3827565 R 886377 CDS YP_004789897.1 344204754 11056317 complement(3827916..3828749) 1 NC_015945.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; COGs: COG4105 DNA uptake lipoprotein; InterPro IPR017689; KEGG: fbc:FB2170_13386 putative lipoprotein; SPTR: Conserved hypothetical lipoprotein; TIGRFAM: Outer membrane assembly lipoprotein YfiO; outer membrane assembly lipoprotein YfiO 3828749 11056317 Murru_3463 Muricauda ruestringensis DSM 13258 outer membrane assembly lipoprotein YfiO YP_004789897.1 3827916 R 886377 CDS YP_004789898.1 344204755 11056318 complement(3828858..3829748) 1 NC_015945.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; HAMAP: Dihydrodipicolinate synthase; InterPro IPR002220:IPR005263; KEGG: fps:FP1836 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase; PRIAM: Dihydrodipicolinate synthase; SPTR: Putative dihydrodipicolinate synthase; TIGRFAM: Dihydrodipicolinate synthase subfamily; dihydrodipicolinate synthase 3829748 11056318 Murru_3464 Muricauda ruestringensis DSM 13258 dihydrodipicolinate synthase YP_004789898.1 3828858 R 886377 CDS YP_004789899.1 344204756 11056319 complement(3829753..3830286) 1 NC_015945.1 KEGG: fbc:FB2170_13396 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3830286 11056319 Murru_3465 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789899.1 3829753 R 886377 CDS YP_004789900.1 344204757 11056320 3830294..3831115 1 NC_015945.1 PFAM: 5'-nucleotidase, C-terminal domain; COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR008334; KEGG: fbc:FB2170_13401 putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase; PFAM: 5'-Nucleotidase, C-terminal; SPTR: Putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase; 5'-nucleotidase 3831115 11056320 Murru_3466 Muricauda ruestringensis DSM 13258 5'-nucleotidase YP_004789900.1 3830294 D 886377 CDS YP_004789901.1 344204758 11056321 3831118..3832029 1 NC_015945.1 PFAM: Calcineurin-like phosphoesterase; COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR004843:IPR006311; KEGG: fbc:FB2170_13406 putative secreted 5'-nucleotidase; PFAM: Metallo-dependent phosphatase; PRIAM: 5'-nucleotidase; SPTR: Possible secreted 5'-nucleotidase; 5'-nucleotidase 3832029 11056321 Murru_3467 Muricauda ruestringensis DSM 13258 5'-nucleotidase YP_004789901.1 3831118 D 886377 CDS YP_004789902.1 344204759 11056322 complement(3832877..3834655) 1 NC_015945.1 PFAM: Mycoplasma protein of unknown function, DUF285; Cadherin domain; TIGRFAM: bacterial surface protein 26-residue repeat; InterPro IPR002126:IPR005046:IPR011889; KEGG: srm:PSR_61030 conserved hypothetical protein containing fibronectin, type III domain; PFAM: Protein of unknown function DUF285, lipoprotein predicted; Cadherin; SMART: Cadherin; SPTR: Transmembrane protein, putative; TIGRFAM: Bacterial surface protein 26-residue repeat; lipoprotein 3834655 11056322 Murru_3468 Muricauda ruestringensis DSM 13258 lipoprotein YP_004789902.1 3832877 R 886377 CDS YP_004789903.1 344204760 11056323 3834692..3834982 1 NC_015945.1 hypothetical protein 3834982 11056323 Murru_3469 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789903.1 3834692 D 886377 CDS YP_004789904.1 344204761 11056324 complement(3834972..3835265) 1 NC_015945.1 KEGG: fbc:FB2170_13411 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3835265 11056324 Murru_3470 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789904.1 3834972 R 886377 CDS YP_004789905.1 344204762 11056325 complement(3835262..3837262) 1 NC_015945.1 PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent; COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); HAMAP: NAD-dependent DNA ligase; InterProIPR013839:IPR004150:IPR004149:IPR001357:IPR 001679:IPR013840:IPR003583; KEGG: fbc:FB2170_13426 DNA ligase; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; BRCT; PRIAM: DNA ligase (NAD(+)); SMART: NAD-dependent DNA ligase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; BRCT; SPTR: DNA ligase; TIGRFAM: NAD-dependent DNA ligase; DNA ligase 3837262 11056325 Murru_3471 Muricauda ruestringensis DSM 13258 DNA ligase YP_004789905.1 3835262 R 886377 CDS YP_004789906.1 344204763 11056326 complement(3837259..3838176) 1 NC_015945.1 PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific; COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR007848:IPR004556:IPR019874; KEGG: fbc:FB2170_13431 protoporphyrinogen oxidase; PFAM: Methyltransferase small; SPTR: Protoporphyrinogen oxidase; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; protein-(glutamine-N5) methyltransferase 3838176 11056326 Murru_3472 Muricauda ruestringensis DSM 13258 protein-(glutamine-N5) methyltransferase YP_004789906.1 3837259 R 886377 CDS YP_004789907.1 344204764 11056327 complement(3838176..3838661) 1 NC_015945.1 PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: fbc:FB2170_13436 histone acetyltransferase HPA2-related acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Histone acetyltransferase HPA2-related acetyltransferase; N-acetyltransferase GCN5 3838661 11056327 Murru_3473 Muricauda ruestringensis DSM 13258 N-acetyltransferase GCN5 YP_004789907.1 3838176 R 886377 CDS YP_004789908.1 344204765 11056328 3838674..3839744 1 NC_015945.1 PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD; COGs: COG0117 Pyrimidine deaminase; InterPro IPR002125:IPR002734:IPR004794; KEGG: fbc:FB2170_13453 putative riboflavin biosynthesis protein; PFAM: CMP/dCMP deaminase, zinc-binding; Bacterial bifunctional deaminase-reductase, C-terminal; PRIAM: Diaminohydroxyphosphoribosylaminopyrimidine deaminase., 5-amino-6-(5-phosphoribosylamino)uracil reductase; SPTR: Putative riboflavin biosynthesis protein; TIGRFAM: Riboflavin biosynthesis protein RibD; riboflavin biosynthesis protein RibD 3839744 11056328 Murru_3474 Muricauda ruestringensis DSM 13258 riboflavin biosynthesis protein RibD YP_004789908.1 3838674 D 886377 CDS YP_004789909.1 344204766 11056329 3839737..3840339 1 NC_015945.1 TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; COGs: COG1011 hydrolase (HAD superfamily); KEGG: fbc:FB2170_13458 putative haloacid dehalogenase-like hydrolase; SPTR: Putative haloacid dehalogenase-type hydrolase; haloacid dehalogenase 3840339 11056329 Murru_3475 Muricauda ruestringensis DSM 13258 haloacid dehalogenase YP_004789909.1 3839737 D 886377 CDS YP_004789910.1 344204767 11056330 3840340..3841203 1 NC_015945.1 PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: fbc:FB2170_13463 hypothetical protein; PFAM: Drug/metabolite transporter; SPTR: Putative uncharacterized protein; hypothetical protein 3841203 11056330 Murru_3476 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789910.1 3840340 D 886377 CDS YP_004789911.1 344204768 11056331 3841203..3841817 1 NC_015945.1 PFAM: Uncharacterized protein family UPF0029; TIGRFAM: uncharacterized protein, YigZ family; COGs: COG1739 conserved hypothetical protein; InterPro IPR001498; KEGG: fbc:FB2170_13468 hypothetical protein; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; SPTR: Putative uncharacterized protein; hypothetical protein 3841817 11056331 Murru_3477 Muricauda ruestringensis DSM 13258 hypothetical protein YP_004789911.1 3841203 D 886377 CDS YP_004789912.1 344204769 11056332 complement(3841930..3842328) 1 NC_015945.1 PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; tol-pal system-associated acyl-CoA thioesterase; COGs: COG0824 thioesterase; InterPro IPR006683:IPR006684; KEGG: fbc:FB2170_13473 thioesterase family protein; PFAM: Thioesterase superfamily; SPTR: Thioesterase family protein; TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; IMG reference gene:2505693348_SP; 4-hydroxybenzoyl-CoA thioesterase 3842328 11056332 Murru_3478 Muricauda ruestringensis DSM 13258 4-hydroxybenzoyl-CoA thioesterase YP_004789912.1 3841930 R 886377 CDS