-- dump date 20120504_152712 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 886377000001 SEQ_END SEQ_END NC_015945.1 3842422 3842422 DR NC_015945.1; contig end 3842422..3842422 Muricauda ruestringensis DSM 13258 YP_004786481.1 CDS Murru_0001 NC_015945.1 108 1532 D PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA; COGs: COG0593 ATPase involved in DNA replication initiation; HAMAP: Chromosomal replication control, initiator DnaA; InterPro IPR003593:IPR013159:IPR001957:IPR013317; KEGG: fbc:FB2170_13478 chromosomal replication initiation protein; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal; SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core; SPTR: Chromosomal replication initiator protein dnaA; TIGRFAM: Chromosomal replication control, initiator DnaA; chromosomal replication initiator protein dnaA 108..1532 Muricauda ruestringensis DSM 13258 11056333 YP_004786482.1 CDS Murru_0002 NC_015945.1 1717 2169 D PFAM: Low molecular weight phosphotyrosine protein phosphatase; COGs: COG0394 Protein-tyrosine-phosphatase; InterPro IPR017867; KEGG: fbc:FB2170_13483 phosphotyrosine protein phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; PRIAM: Acid phosphatase; SMART: Protein-tyrosine phosphatase, low molecular weight; SPTR: Low molecular weight phosphotyrosine protein phosphatase; protein tyrosine phosphatase 1717..2169 Muricauda ruestringensis DSM 13258 11052809 YP_004786483.1 CDS Murru_0003 NC_015945.1 2174 2902 D PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; COGs: COG0313 methyltransferase; InterPro IPR000878; KEGG: fbc:FB2170_13488 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; PFAM: Tetrapyrrole methylase; SPTR: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 2174..2902 Muricauda ruestringensis DSM 13258 11052810 YP_004786484.1 CDS Murru_0004 NC_015945.1 2949 3593 R KEGG: fbc:FB2170_13493 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2949..3593) Muricauda ruestringensis DSM 13258 11052811 YP_004786485.1 CDS Murru_0005 NC_015945.1 3754 4797 R PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family; COGs: COG1559 periplasmic solute-binding protein; InterPro IPR003770; KEGG: fbc:FB2170_13498 hypothetical protein; PFAM: Uncharacterised protein family UPF0755; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0755; aminodeoxychorismate lyase complement(3754..4797) Muricauda ruestringensis DSM 13258 11052812 YP_004786486.1 CDS Murru_0006 NC_015945.1 4787 5320 R PFAM: Acetyltransferase (GNAT) family; COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: fbc:FB2170_13503 putative acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Putative acetyltransferase; N-acetyltransferase GCN5 complement(4787..5320) Muricauda ruestringensis DSM 13258 11052813 YP_004786487.1 CDS Murru_0007 NC_015945.1 5308 6090 R PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; COGs: COG0253 Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; InterPro IPR001653; KEGG: fbc:FB2170_13508 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; SPTR: Diaminopimelate epimerase; TIGRFAM: Diaminopimelate epimerase; diaminopimelate epimerase complement(5308..6090) Muricauda ruestringensis DSM 13258 11052814 YP_004786488.1 CDS Murru_0008 NC_015945.1 6226 7623 D PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478:IPR001254; KEGG: fbc:FB2170_13513 putative heat shock-related protease; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; PRIAM: HtrA2 peptidase; SMART: PDZ/DHR/GLGF; SPTR: Putative heat shock-related protease; HtrA2 peptidase 6226..7623 Muricauda ruestringensis DSM 13258 11052815 YP_004786489.1 CDS Murru_0009 NC_015945.1 7754 9202 D PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR020828:IPR006424:IPR020829; KEGG: fbc:FB2170_13518 glyceraldehyde 3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; SPTR: Glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase 7754..9202 Muricauda ruestringensis DSM 13258 11052816 YP_004786490.1 CDS Murru_0010 NC_015945.1 9309 9914 D KEGG: rbi:RB2501_16144 tRNA (guanine-N(1)-)-methyltransferase; SPTR: tRNA (Guanine-N(1)-)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase 9309..9914 Muricauda ruestringensis DSM 13258 11052817 YP_004786491.1 CDS Murru_0011 NC_015945.1 10196 10879 D PFAM: tRNA (Guanine-1)-methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; COGs: COG0336 tRNA-(guanine-N1)-methyltransferase; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; InterPro IPR002649:IPR016009; KEGG: fbc:FB2170_13533 tRNA (guanine-N(1)-)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase; PRIAM: tRNA (guanine-N(1)-)-methyltransferase; SPTR: tRNA (guanine-N(1)-)-methyltransferase; TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; tRNA (guanine-N(1)-)-methyltransferase 10196..10879 Muricauda ruestringensis DSM 13258 11052818 YP_004786492.1 CDS Murru_0012 NC_015945.1 11012 11362 D PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type; COGs: COG0335 Ribosomal protein L19; HAMAP: Ribosomal protein L19; InterPro IPR001857; KEGG: rbi:RB2501_16154 50S ribosomal protein L19; PFAM: Ribosomal protein L19; SPTR: 50S ribosomal protein L19; TIGRFAM: Ribosomal protein L19; 50S ribosomal protein L19 11012..11362 Muricauda ruestringensis DSM 13258 11052819 YP_004786493.1 CDS Murru_0013 NC_015945.1 11510 11653 D hypothetical protein 11510..11653 Muricauda ruestringensis DSM 13258 11052820 YP_004786494.1 CDS Murru_0014 NC_015945.1 11990 14209 D PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type; COGs: COG2838 Monomeric isocitrate dehydrogenase; InterPro IPR004436; KEGG: fbc:FB2170_13543 isocitrate dehydrogenase; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; PRIAM: Isocitrate dehydrogenase (NADP(+)); SPTR: Isocitrate dehydrogenase [NADP]; TIGRFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; isocitrate dehydrogenase 11990..14209 Muricauda ruestringensis DSM 13258 11052821 YP_004786495.1 CDS Murru_0015 NC_015945.1 14294 15613 R PFAM: GntP family permease; TIGRFAM: gluconate transporter; COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: sth:STH2489 GntP family permease; PFAM: Gluconate transporter; SPTR: GntP family permease; TIGRFAM: Gluconate transporter; gluconate transporter complement(14294..15613) Muricauda ruestringensis DSM 13258 11052822 YP_004786496.1 CDS Murru_0016 NC_015945.1 15671 15907 D KEGG: fbc:FB2170_13563 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 15671..15907 Muricauda ruestringensis DSM 13258 11052823 YP_004786497.1 CDS Murru_0017 NC_015945.1 15904 16623 R KEGG: rbi:RB2501_00025 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(15904..16623) Muricauda ruestringensis DSM 13258 11052824 YP_004786498.1 CDS Murru_0018 NC_015945.1 16726 17814 D PFAM: M42 glutamyl aminopeptidase; COGs: COG1363 Cellulase M and related protein; InterPro IPR008007; KEGG: fbc:FB2170_13578 endoglucanase; PFAM: Peptidase M42; PRIAM: Cellulase; SPTR: Aminopeptidase; cellulase 16726..17814 Muricauda ruestringensis DSM 13258 11052825 YP_004786499.1 CDS Murru_0019 NC_015945.1 17897 18445 D PFAM: Protein of unknown function DUF91; NUDIX domain; COGs: COG1443 Isopentenyldiphosphate isomerase; InterPro IPR000086; KEGG: fbc:FB2170_13583 NUDIX family hydrolase; PFAM: NUDIX hydrolase domain; SPTR: Hydrolase of MutT (Nudix) family protein; NUDIX hydrolase 17897..18445 Muricauda ruestringensis DSM 13258 11052826 YP_004786500.1 CDS Murru_0020 NC_015945.1 18429 19817 R PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; COGs: COG0124 Histidyl-tRNA synthetase; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; InterPro IPR015807:IPR002314:IPR004154; KEGG: rbi:RB2501_00040 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Anticodon-binding; PRIAM: Histidine--tRNA ligase; SPTR: Histidyl-tRNA synthetase; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; histidyl-tRNA synthetase complement(18429..19817) Muricauda ruestringensis DSM 13258 11052827 YP_004786501.1 CDS Murru_0021 NC_015945.1 20110 20583 R KEGG: rbi:RB2501_00051 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(20110..20583) Muricauda ruestringensis DSM 13258 11052828 YP_004786502.1 CDS Murru_0022 NC_015945.1 20769 21239 D KEGG: zpr:ZPR_1634 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 20769..21239 Muricauda ruestringensis DSM 13258 11052829 YP_004786503.1 CDS Murru_0023 NC_015945.1 21410 21667 R hypothetical protein complement(21410..21667) Muricauda ruestringensis DSM 13258 11052830 YP_004786504.1 CDS Murru_0024 NC_015945.1 22133 22390 R hypothetical protein complement(22133..22390) Muricauda ruestringensis DSM 13258 11052831 YP_004786505.1 CDS Murru_0025 NC_015945.1 22793 23245 R PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9; COGs: COG0359 Ribosomal protein L9; HAMAP: Ribosomal protein L9, bacteria/chloroplast; InterPro IPR020594:IPR020070:IPR020069; KEGG: fbc:FB2170_13598 50S ribosomal protein L9; PFAM: Ribosomal protein L9, C-terminal; Ribosomal protein L9, N-terminal; SPTR: 50S ribosomal protein L9; TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; 50S ribosomal protein L9 complement(22793..23245) Muricauda ruestringensis DSM 13258 11052832 YP_004786506.1 CDS Murru_0026 NC_015945.1 23259 23555 R PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18; COGs: COG0238 Ribosomal protein S18; HAMAP: Ribosomal protein S18; InterPro IPR001648; KEGG: rbi:RB2501_00061 30S ribosomal protein S18; PFAM: Ribosomal protein S18; SPTR: 30S ribosomal protein S18; TIGRFAM: Ribosomal protein S18; 30S ribosomal protein S18 complement(23259..23555) Muricauda ruestringensis DSM 13258 11052833 YP_004786507.1 CDS Murru_0027 NC_015945.1 23560 23898 R PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6; COGs: COG0360 Ribosomal protein S6; HAMAP: Ribosomal protein S6, plastid/chloroplast; InterPro IPR000529:IPR020814; KEGG: rbi:RB2501_00066 30S ribosomal protein S6; PFAM: Ribosomal protein S6; SPTR: 30S ribosomal protein S6; TIGRFAM: Ribosomal protein S6; 30S ribosomal protein S6 complement(23560..23898) Muricauda ruestringensis DSM 13258 11052834 YP_004786508.1 CDS Murru_0028 NC_015945.1 24135 24827 D PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: fbc:FB2170_13613 two-component system response regulator; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Two-component system response regulator protein; LytTR family two component transcriptional regulator 24135..24827 Muricauda ruestringensis DSM 13258 11052835 YP_004786509.1 CDS Murru_0029 NC_015945.1 24828 27284 R PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N'; COGs: COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; InterPro IPR014001:IPR001650:IPR005259:IPR011545; KEGG: fbc:FB2170_13618 primosomal protein N'; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: Primosomal protein N'; TIGRFAM: Primosomal protein n; primosomal protein N' complement(24828..27284) Muricauda ruestringensis DSM 13258 11052836 YP_004786510.1 CDS Murru_0030 NC_015945.1 27288 27737 R PFAM: Uncharacterized protein conserved in bacteria (DUF2147); InterPro IPR019223; KEGG: fbc:FB2170_13623 hypothetical protein; PFAM: Protein of unknown function DUF2147; SPTR: Putative uncharacterized protein; hypothetical protein complement(27288..27737) Muricauda ruestringensis DSM 13258 11052837 YP_004786511.1 CDS Murru_0031 NC_015945.1 27712 28692 R PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); COGs: COG1295 membrane protein; InterPro IPR004664; KEGG: fbc:FB2170_13628 ribonuclease BN; PFAM: Ribonuclease BN-related; SPTR: Ribonuclease BN; ribonuclease BN complement(27712..28692) Muricauda ruestringensis DSM 13258 11052838 YP_004786512.1 CDS Murru_0032 NC_015945.1 28693 29550 R PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR004393:IPR022412:IPR002638; KEGG: fbc:FB2170_13633 putative nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal; PRIAM: Nicotinate-nucleotide diphosphorylase (carboxylating); SPTR: Putative nicotinate-nucleotide pyrophosphorylase; TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase complement(28693..29550) Muricauda ruestringensis DSM 13258 11052839 YP_004786513.1 CDS Murru_0033 NC_015945.1 29643 30116 D PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH; COGs: COG1576 conserved hypothetical protein; HAMAP: SPOUT methyltransferase, predicted; InterPro IPR003742; KEGG: fbc:FB2170_13638 hypothetical protein; PFAM: SPOUT methyltransferase, predicted; SPTR: Ribosomal RNA large subunit methyltransferase H; ribosomal RNA large subunit methyltransferase H 29643..30116 Muricauda ruestringensis DSM 13258 11052840 YP_004786514.1 CDS Murru_0034 NC_015945.1 30198 32090 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like; D-3-phosphoglycerate dehydrogenase; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140:IPR002912; KEGG: fbc:FB2170_13643 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; Amino acid-binding ACT; SPTR: D-3-phosphoglycerate dehydrogenase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein complement(30198..32090) Muricauda ruestringensis DSM 13258 11052841 YP_004786515.1 CDS Murru_0035 NC_015945.1 32434 32886 R PFAM: Isoprenylcysteine carboxyl methyltransferase (ICMT) family; COGs: COG2020 Putative protein-S-isoprenylcysteine methyltransferase; KEGG: rbi:RB2501_00116 putative protein-S-isoprenylcysteine methyltransferase; SPTR: Predicted protein-S-isoprenylcysteine methyltransferase; putative protein-S-isoprenylcysteine methyltransferase complement(32434..32886) Muricauda ruestringensis DSM 13258 11052842 YP_004786516.1 CDS Murru_0036 NC_015945.1 32946 33527 D PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; COGs: COG0127 Xanthosine triphosphate pyrophosphatase; HAMAP: Nucleoside-triphosphatase; InterPro IPR002637:IPR020922; KEGG: fjo:Fjoh_2403 putative deoxyribonucleoside-triphosphatase; PFAM: Ham1-like protein; PRIAM: Nucleoside-triphosphatase; SPTR: Nucleoside-triphosphatase; TIGRFAM: Ham1-like protein; nucleoside-triphosphatase rdgB 32946..33527 Muricauda ruestringensis DSM 13258 11052843 YP_004786517.1 CDS Murru_0037 NC_015945.1 33672 35432 D PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001:IPR001650:IPR011545; KEGG: fbc:FB2170_13688 DEAD box family ATP-dependent RNA helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent RNA helicase, DEAD/DEAH box family protein; DEAD/DEAH box helicase 33672..35432 Muricauda ruestringensis DSM 13258 11052844 YP_004786518.1 CDS Murru_0038 NC_015945.1 35508 36290 D KEGG: fbc:FB2170_13698 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 35508..36290 Muricauda ruestringensis DSM 13258 11052845 YP_004786519.1 CDS Murru_0039 NC_015945.1 36389 38071 D PFAM: Alpha amylase, catalytic domain; COGs: COG0366 Glycosidase; InterPro IPR006589:IPR006047; KEGG: fbc:FB2170_13703 periplasmic alpha-amylase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; PRIAM: Cyclomaltodextrin glucanotransferase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Periplasmic alpha-amylase; cyclomaltodextrin glucanotransferase 36389..38071 Muricauda ruestringensis DSM 13258 11052846 YP_004786520.1 CDS Murru_0040 NC_015945.1 38074 38442 R PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; COGs: COG3324 protein related to lactoylglutathione lyase; InterPro IPR004360; KEGG: rbi:RB2501_00141 putative glyoxalase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Putative glyoxalase; bleomycin resistance protein complement(38074..38442) Muricauda ruestringensis DSM 13258 11052847 YP_004786521.1 CDS Murru_0041 NC_015945.1 38458 38985 R PFAM: Polyketide cyclase / dehydrase and lipid transport; InterPro IPR019587; KEGG: fbc:FB2170_13713 hypothetical protein; PFAM: Polyketide cyclase/dehydrase; SPTR: Putative uncharacterized protein; polyketide cyclase/dehydrase complement(38458..38985) Muricauda ruestringensis DSM 13258 11052848 YP_004786522.1 CDS Murru_0042 NC_015945.1 39028 39681 R PFAM: SpoU rRNA Methylase family; COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: fbc:FB2170_13718 SpoU protein; PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: SpoU protein; tRNA/rRNA methyltransferase SpoU complement(39028..39681) Muricauda ruestringensis DSM 13258 11052849 YP_004786523.1 CDS Murru_0043 NC_015945.1 39784 40791 D PFAM: Glycosyl hydrolases family 43; COGs: COG3507 Beta-xylosidase; InterPro IPR006710; KEGG: dfe:Dfer_0193 glycoside hydrolase family 43; PFAM: Glycoside hydrolase, family 43; SPTR: Putative endo-1,4-beta-xylanase; glycoside hydrolase 39784..40791 Muricauda ruestringensis DSM 13258 11052850 YP_004786524.1 CDS Murru_0044 NC_015945.1 40877 41629 D PFAM: DJ-1/PfpI family; COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR002818; KEGG: gfo:GFO_3027 hypothetical protein; PFAM: ThiJ/PfpI; SPTR: Putative uncharacterized protein; ThiJ/PfpI domain-containing protein 40877..41629 Muricauda ruestringensis DSM 13258 11052851 YP_004786525.1 CDS Murru_0045 NC_015945.1 41653 42351 D PFAM: Sir2 family; COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; HAMAP: NAD-dependent histone deacetylase, silent information regulator Sir2; InterPro IPR003000; KEGG: cat:CA2559_08031 hypothetical protein; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2; SPTR: Putative uncharacterized protein; NAD-dependent deacetylase 41653..42351 Muricauda ruestringensis DSM 13258 11052852 YP_004786526.1 CDS Murru_0046 NC_015945.1 42335 42787 R KEGG: fbc:FB2170_13728 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(42335..42787) Muricauda ruestringensis DSM 13258 11052853 YP_004786527.1 CDS Murru_0047 NC_015945.1 42823 43395 D KEGG: fbc:FB2170_13733 adenylosuccinate lyase; SPTR: Adenylosuccinate lyase; adenylosuccinate lyase 42823..43395 Muricauda ruestringensis DSM 13258 11052854 YP_004786528.1 CDS Murru_0048 NC_015945.1 43442 44785 D PFAM: Lyase; Adenylosuccinate lyase C-terminal; TIGRFAM: adenylosuccinate lyase; COGs: COG0015 Adenylosuccinate lyase; InterPro IPR004769:IPR022761:IPR013539; KEGG: cat:CA2559_06215 adenylosuccinate lyase; PFAM: Adenylosuccinate lyase C-terminal/plant; Lyase 1, N-terminal; PRIAM: Adenylosuccinate lyase; SPTR: Adenylosuccinate lyase; TIGRFAM: Adenylosuccinate lyase; adenylosuccinate lyase 43442..44785 Muricauda ruestringensis DSM 13258 11052855 YP_004786529.1 CDS Murru_0049 NC_015945.1 45154 45969 R PFAM: Mechanosensitive ion channel; Conserved TM helix; COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: fbc:FB2170_13748 mechanosensitive ion channel family protein; PFAM: Mechanosensitive ion channel MscS; SPTR: Mechanosensitive ion channel family protein; mechanosensitive ion channel protein MscS complement(45154..45969) Muricauda ruestringensis DSM 13258 11052856 YP_004786530.1 CDS Murru_0050 NC_015945.1 46099 46638 R KEGG: fbc:FB2170_13753 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(46099..46638) Muricauda ruestringensis DSM 13258 11052857 YP_004786531.1 CDS Murru_0051 NC_015945.1 46752 47291 R KEGG: fbc:FB2170_13763 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(46752..47291) Muricauda ruestringensis DSM 13258 11052858 YP_004786532.1 CDS Murru_0052 NC_015945.1 47303 47737 R KEGG: fbc:FB2170_13768 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(47303..47737) Muricauda ruestringensis DSM 13258 11052859 YP_004786533.1 CDS Murru_0053 NC_015945.1 47724 48233 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: fbc:FB2170_13773 putative ECF family RNA polymerase sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: Putative RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(47724..48233) Muricauda ruestringensis DSM 13258 11052860 YP_004786534.1 CDS Murru_0054 NC_015945.1 48447 49946 D PFAM: Peptidase family S41; COGs: COG0793 Periplasmic protease; InterPro IPR005151; KEGG: fbc:FB2170_13778 carboxyl-terminal protease; PFAM: Peptidase S41; SPTR: Carboxyl-terminal protease; peptidase S41 48447..49946 Muricauda ruestringensis DSM 13258 11052861 YP_004786535.1 CDS Murru_0055 NC_015945.1 50096 50938 R PFAM: Enoyl-CoA hydratase/isomerase family; TIGRFAM: naphthoate synthase (dihydroxynaphthoic acid synthetase); COGs: COG0447 Dihydroxynaphthoic acid synthase; InterPro IPR010198:IPR001753; KEGG: ran:Riean_0298 1,4-dihydroxy-2-naphthoate synthase; PFAM: Crotonase, core; PRIAM: Naphthoate synthase; SPTR: Naphthoate synthase; TIGRFAM: Naphthoate synthase; naphthoate synthase complement(50096..50938) Muricauda ruestringensis DSM 13258 11052862 YP_004786536.1 CDS Murru_0056 NC_015945.1 51136 51723 D PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: lby:Lbys_0815 transcriptional regulator, crp/fnr family; PFAM: Cyclic nucleotide-binding domain; SPTR: Cyclic nucleotide binding regulatory protein; putative Crp/Fnr family transcriptional regulator 51136..51723 Muricauda ruestringensis DSM 13258 11052863 YP_004786537.1 CDS Murru_0057 NC_015945.1 51789 52229 D PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain; COGs: COG2128 conserved hypothetical protein; InterPro IPR004675:IPR003779; KEGG: chu:CHU_1943 hypothetical protein; PFAM: Carboxymuconolactone decarboxylase; SPTR: Alkylhydroperoxidase; TIGRFAM: Alkylhydroperoxidase AhpD core; alkylhydroperoxidase 51789..52229 Muricauda ruestringensis DSM 13258 11052864 YP_004786538.1 CDS Murru_0058 NC_015945.1 52423 53010 D KEGG: hch:HCH_06797 Tfp pilus assembly protein, major pilin PilA; SPTR: Putative uncharacterized protein; hypothetical protein 52423..53010 Muricauda ruestringensis DSM 13258 11052865 YP_004786539.1 CDS Murru_0059 NC_015945.1 53050 55902 R PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterPro IPR006275:IPR005481:IPR005479:IPR005480; KEGG: fbc:FB2170_13823 carbamoyl-phosphate synthase large subunit; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Carbamoyl-phosphate synthetase, large subunit, oligomerisation; PRIAM: Carbamoyl-phosphate synthase (ammonia); SPTR: Carbamoyl-phosphate synthase, large subunit; TIGRFAM: Carbamoyl-phosphate synthase, large subunit; carbamoyl-phosphate synthase large subunit complement(53050..55902) Muricauda ruestringensis DSM 13258 11052866 YP_004786540.1 CDS Murru_0060 NC_015945.1 55996 56154 R PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; HAMAP: Ribosomal protein L34; InterPro IPR000271; KEGG: coc:Coch_0279 ribosomal protein L34; PFAM: Ribosomal protein L34; SPTR: 50S ribosomal protein L34; TIGRFAM: Ribosomal protein L34; 50S ribosomal protein L34 complement(55996..56154) Muricauda ruestringensis DSM 13258 11052867 YP_004786541.1 CDS Murru_0061 NC_015945.1 56324 56839 D KEGG: fbc:FB2170_13833 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 56324..56839 Muricauda ruestringensis DSM 13258 11052868 YP_004786542.1 CDS Murru_0062 NC_015945.1 56848 57003 R hypothetical protein complement(56848..57003) Muricauda ruestringensis DSM 13258 11052869 YP_004786543.1 CDS Murru_0063 NC_015945.1 57107 57355 D KEGG: cts:Ctha_0277 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 57107..57355 Muricauda ruestringensis DSM 13258 11052870 YP_004786544.1 CDS Murru_0064 NC_015945.1 57356 57778 D PFAM: PIN domain; InterPro IPR002716; KEGG: zpr:ZPR_4525 PilT domain-containing protein; PFAM: PilT protein, N-terminal; SPTR: PilT domain-containing protein; PilT protein domain-containing protein 57356..57778 Muricauda ruestringensis DSM 13258 11052871 YP_004786545.1 CDS Murru_0065 NC_015945.1 58050 58943 D KEGG: fjo:Fjoh_0893 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 58050..58943 Muricauda ruestringensis DSM 13258 11052872 YP_004786546.1 CDS Murru_0066 NC_015945.1 59067 60032 R PFAM: Transglycosylase SLT domain; InterPro IPR008258; KEGG: fbc:FB2170_13838 putative membrane-bound lytic murein transglycosylase; PFAM: Lytic transglycosylase-like, catalytic; SPTR: Putative membrane-bound lytic murein transglycosylase; lytic transglycosylase complement(59067..60032) Muricauda ruestringensis DSM 13258 11052873 YP_004786547.1 CDS Murru_0067 NC_015945.1 60081 60743 R KEGG: fbc:FB2170_13843 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein complement(60081..60743) Muricauda ruestringensis DSM 13258 11052874 YP_004786548.1 CDS Murru_0068 NC_015945.1 60908 61201 D KEGG: fbc:FB2170_13848 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 60908..61201 Muricauda ruestringensis DSM 13258 11052875 YP_004786549.1 CDS Murru_0069 NC_015945.1 61254 62582 R PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; radical SAM methylthiotransferase, MiaB/RimO family; COGs: COG0621 2-methylthioadenine synthetase; InterProIPR006638:IPR005839:IPR006467:IPR013848:IPR 007197; KEGG: zpr:ZPR_2038 possible 2-methylthioadenine synthetase; PFAM: Methylthiotransferase, N-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein; TIGRFAM: MiaB-like tRNA modifying enzyme; Methylthiotransferase; MiaB-like tRNA modifying enzyme complement(61254..62582) Muricauda ruestringensis DSM 13258 11052876 YP_004786550.1 CDS Murru_0070 NC_015945.1 62843 64144 D PFAM: Alpha-L-fucosidase; COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933; KEGG: fbc:FB2170_04995 putative exported alpha-L-fucosidase protein; PFAM: Glycoside hydrolase, family 29; SMART: Glycoside hydrolase, family 29; SPTR: Putative exported alpha-L-fucosidase protein; glycoside hydrolase 62843..64144 Muricauda ruestringensis DSM 13258 11052877 YP_004786551.1 CDS Murru_0071 NC_015945.1 64160 64567 D PFAM: Antibiotic biosynthesis monooxygenase; InterPro IPR007138; KEGG: rbi:RB2501_12207 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Putative uncharacterized protein; antibiotic biosynthesis monooxygenase 64160..64567 Muricauda ruestringensis DSM 13258 11052878 YP_004786552.1 CDS Murru_0072 NC_015945.1 64722 66767 D PFAM: Amidohydrolase family; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: mtt:Ftrac_0661 amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase family protein; amidohydrolase 64722..66767 Muricauda ruestringensis DSM 13258 11052879 YP_004786553.1 CDS Murru_0073 NC_015945.1 66902 68494 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: rbi:RB2501_06320 beta-lactamase precursor (penicillin-binding protein); PFAM: Beta-lactamase-related; SPTR: Hypothetical beta-lactamase (Penicillin-binding protein); beta-lactamase 66902..68494 Muricauda ruestringensis DSM 13258 11052880 YP_004786554.1 CDS Murru_0074 NC_015945.1 68733 69938 D PFAM: Domain of unknown function (DUF955); InterPro IPR010359; KEGG: shl:Shal_0836 hypothetical protein; PFAM: Protein of unknown function DUF955; SPTR: Putative uncharacterized protein; hypothetical protein 68733..69938 Muricauda ruestringensis DSM 13258 11052881 YP_004786555.1 CDS Murru_0075 NC_015945.1 69931 70869 D PFAM: HNH endonuclease; KEGG: cpc:Cpar_1031 HNH endonuclease; SPTR: HNH endonuclease; hypothetical protein 69931..70869 Muricauda ruestringensis DSM 13258 11052882 YP_004786556.1 CDS Murru_0076 NC_015945.1 71075 71449 D hypothetical protein 71075..71449 Muricauda ruestringensis DSM 13258 11052883 YP_004786557.1 CDS Murru_0077 NC_015945.1 71514 73142 D PFAM: Calcineurin-like phosphoesterase; 5'-nucleotidase, C-terminal domain; COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR004843:IPR008334; KEGG: gfo:GFO_1276 periplasmic 5'-nucleotidase; PFAM: 5'-Nucleotidase, C-terminal; Metallo-dependent phosphatase; PRIAM: 5'-nucleotidase; SPTR: Periplasmic 5'-nucleotidase; 5'-nucleotidase 71514..73142 Muricauda ruestringensis DSM 13258 11052884 YP_004786558.1 CDS Murru_0078 NC_015945.1 73152 73550 D PFAM: DoxX; InterPro IPR011637; KEGG: gfo:GFO_1274 DoxX domain; PFAM: Uncharacterised protein family YphA; SPTR: Membrane protein containing DoxX domain; DoxX family protein 73152..73550 Muricauda ruestringensis DSM 13258 11052885 YP_004786559.1 CDS Murru_0079 NC_015945.1 73552 73977 D PFAM: DsrE/DsrF-like family; KEGG: cat:CA2559_11798 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 73552..73977 Muricauda ruestringensis DSM 13258 11052886 YP_004786560.1 CDS Murru_0080 NC_015945.1 74063 75877 R PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: putative hydrolase, CocE/NonD family; COGs: COG2936 acyl esterase; InterPro IPR013736:IPR005674:IPR000383; KEGG: fbc:FB2170_11806 acylase; SMART: Peptidase S15/CocE/NonD, C-terminal; SPTR: Acylase, putative; TIGRFAM: CocE/NonD hydrolase; hydrolase complement(74063..75877) Muricauda ruestringensis DSM 13258 11052887 YP_004786561.1 CDS Murru_0081 NC_015945.1 75966 76691 R PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: mtt:Ftrac_1295 two component transcriptional regulator, LytTR family; PFAM: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SMART: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SPTR: Two-component system, regulatory protein; LytTR family two component transcriptional regulator complement(75966..76691) Muricauda ruestringensis DSM 13258 11052888 YP_004786562.1 CDS Murru_0082 NC_015945.1 76688 77749 R PFAM: Histidine kinase; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559:IPR003594; KEGG: mtt:Ftrac_1294 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; ATPase-like, ATP-binding domain; SPTR: Putative transmembrane sensor histidine kinase transcription regulator protein; putative signal transduction histidine kinase complement(76688..77749) Muricauda ruestringensis DSM 13258 11052889 YP_004786563.1 CDS Murru_0084 NC_015945.1 78691 79869 R TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; KEGG: fps:FP1134 sugar phosphate nucleotydyl transferase; SPTR: 50S ribosomal protein L34; sugar phosphate nucleotidyl transferase complement(78691..79869) Muricauda ruestringensis DSM 13258 11052891 YP_004786564.1 CDS Murru_0085 NC_015945.1 79953 80222 R PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; COGs: COG0254 Ribosomal protein L31; InterPro IPR002150; KEGG: rbi:RB2501_00331 50S ribosomal protein L31 type B; PFAM: Ribosomal protein L31; SPTR: 50S ribosomal protein L31; TIGRFAM: Ribosomal protein L31; 50S ribosomal protein L31 complement(79953..80222) Muricauda ruestringensis DSM 13258 11052892 YP_004786565.1 CDS Murru_0086 NC_015945.1 80382 80903 D KEGG: fbc:FB2170_13868 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 80382..80903 Muricauda ruestringensis DSM 13258 11052893 YP_004786566.1 CDS Murru_0087 NC_015945.1 80945 81892 D PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fbc:FB2170_13873 putative glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Putative glycosyltransferase; family 2 glycosyl transferase 80945..81892 Muricauda ruestringensis DSM 13258 11052894 YP_004786567.1 CDS Murru_0088 NC_015945.1 81951 83657 D PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; COGs: COG1109 Phosphomannomutase; InterPro IPR005844:IPR005845:IPR005846; KEGG: fbc:FB2170_13878 phosphoglucomutase phosphomannomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; SPTR: Phosphoglucomutase phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I 81951..83657 Muricauda ruestringensis DSM 13258 11052895 YP_004786568.1 CDS Murru_0089 NC_015945.1 83662 85488 D PFAM: ABC transporter; ABC transporter transmembrane region; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: fbc:FB2170_13883 MsbA family ABC transporter ATP-binding protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein, MsbA family; xenobiotic-transporting ATPase 83662..85488 Muricauda ruestringensis DSM 13258 11052896 YP_004786569.1 CDS Murru_0090 NC_015945.1 85779 86810 R PFAM: BNR/Asp-box repeat; KEGG: fbc:FB2170_13908 putative oxidoreductase; SPTR: Putative oxidoreductase; putative oxidoreductase complement(85779..86810) Muricauda ruestringensis DSM 13258 11052897 YP_004786570.1 CDS Murru_0091 NC_015945.1 86870 88081 D PFAM: NOL1/NOP2/sun family; TIGRFAM: ribosomal RNA small subunit methyltransferase RsmB; COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR001678; KEGG: fbc:FB2170_13918 putative sun protein; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; SPTR: Putative sun protein; Fmu (Sun) domain-containing protein 86870..88081 Muricauda ruestringensis DSM 13258 11052898 YP_004786571.1 CDS Murru_0092 NC_015945.1 88202 89044 D PFAM: short chain dehydrogenase; COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: cpi:Cpin_6378 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 88202..89044 Muricauda ruestringensis DSM 13258 11052899 YP_004786572.1 CDS Murru_0093 NC_015945.1 89100 90002 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: fjo:Fjoh_4692 helix-turn-helix domain-containing protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family protein; AraC family transcriptional regulator 89100..90002 Muricauda ruestringensis DSM 13258 11052900 YP_004786573.1 CDS Murru_0094 NC_015945.1 90295 91887 R TIGRFAM: amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; KEGG: fbc:FB2170_13923 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(90295..91887) Muricauda ruestringensis DSM 13258 11052901 YP_004786574.1 CDS Murru_0095 NC_015945.1 92690 96391 D PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase, single chain form; COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain; InterPro IPR000728:IPR010918; KEGG: fbc:FB2170_13928 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: Phosphoribosylformylglycinamidine synthase; phosphoribosylformylglycinamidine synthase 92690..96391 Muricauda ruestringensis DSM 13258 11052902 YP_004786575.1 CDS Murru_0096 NC_015945.1 96519 98288 D PFAM: AMP-binding enzyme; COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: rbi:RB2501_00401 putative long chain fatty-acid CoA ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: Probable long chain fatty-acid CoA ligase; long-chain-fatty-acid--CoA ligase 96519..98288 Muricauda ruestringensis DSM 13258 11052903 YP_004786576.1 CDS Murru_0097 NC_015945.1 98494 99636 R PFAM: Mycoplasma protein of unknown function, DUF285; InterPro IPR011889:IPR005046; KEGG: mtt:Ftrac_0811 lipoprotein; PFAM: Protein of unknown function DUF285, lipoprotein predicted; SPTR: Transmembrane protein, putative; TIGRFAM: Bacterial surface protein 26-residue repeat; lipoprotein complement(98494..99636) Muricauda ruestringensis DSM 13258 11052904 YP_004786577.1 CDS Murru_0098 NC_015945.1 99837 100286 D PFAM: MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: fbc:FB2170_13958 hypothetical protein; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Putative uncharacterized protein; MarR family transcriptional regulator 99837..100286 Muricauda ruestringensis DSM 13258 11052905 YP_004786578.1 CDS Murru_0099 NC_015945.1 100302 102728 D PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176:IPR006108:IPR001753; KEGG: fbc:FB2170_13963 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase/carnithine racemase fusion; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; SPTR: 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase/carnithine racemase fusion; 3-hydroxyacyl-CoA dehydrogenase 100302..102728 Muricauda ruestringensis DSM 13258 11052906 YP_004786579.1 CDS Murru_0100 NC_015945.1 102762 103121 D PFAM: S23 ribosomal protein; InterPro IPR008815; KEGG: mtt:Ftrac_1685 s23 ribosomal protein; PFAM: 23S rRNA-associated protein; SPTR: Putative uncharacterized protein; S23 ribosomal protein 102762..103121 Muricauda ruestringensis DSM 13258 11052907 YP_004786580.1 CDS Murru_0101 NC_015945.1 103172 104365 D PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR020616:IPR020617; KEGG: cat:CA2559_06175 acetyl-CoA acyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; PRIAM: Acetyl-CoA C-acyltransferase; SPTR: Acetyl-CoA acyltransferase; TIGRFAM: Thiolase; acetyl-CoA acetyltransferase 103172..104365 Muricauda ruestringensis DSM 13258 11052908 YP_004786581.1 CDS Murru_0102 NC_015945.1 104396 104752 D PFAM: S23 ribosomal protein; InterPro IPR008815; KEGG: mtt:Ftrac_1685 s23 ribosomal protein; PFAM: 23S rRNA-associated protein; SPTR: Putative uncharacterized protein; S23 ribosomal protein 104396..104752 Muricauda ruestringensis DSM 13258 11052909 YP_004786582.1 CDS Murru_0103 NC_015945.1 104793 106604 D PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: fbc:FB2170_13973 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; PRIAM: Butyryl-CoA dehydrogenase; SPTR: Acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase 104793..106604 Muricauda ruestringensis DSM 13258 11052910 YP_004786583.1 CDS Murru_0104 NC_015945.1 106789 108588 R PFAM: Glycosyl hydrolases family 15; COGs: COG3387 Glucoamylase and related glycosyl hydrolase; InterPro IPR011613; KEGG: fbc:FB2170_13993 glycoside hydrolase, family 15; PFAM: Glycoside hydrolase 15-related; SPTR: Glycoside hydrolase, family 15; glycoside hydrolase 15-like protein complement(106789..108588) Muricauda ruestringensis DSM 13258 11052911 YP_004786584.1 CDS Murru_0105 NC_015945.1 108692 110902 D PFAM: Trehalose-phosphatase; Glycosyltransferase family 20; TIGRFAM: trehalose-phosphatase; alpha,alpha-trehalose-phosphate synthase [UDP-forming]; HAD-superfamily hydrolase, subfamily IIB; COGs: COG0380 Trehalose-6-phosphate synthase; InterPro IPR003337:IPR006379:IPR001830; KEGG: fbc:FB2170_13998 trehalose-6-phosphate synthase; PFAM: Glycosyl transferase, family 20; Trehalose-phosphatase; PRIAM: Alpha,alpha-trehalose-phosphate synthase (UDP-forming)., Trehalose-phosphatase; SPTR: Trehalose-6-phosphate synthase; TIGRFAM: Trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; trehalose-phosphatase 108692..110902 Muricauda ruestringensis DSM 13258 11052912 YP_004786585.1 CDS Murru_0106 NC_015945.1 110899 112419 D PFAM: SnoaL-like polyketide cyclase; COGs: COG4538 conserved hypothetical protein; InterPro IPR009959; KEGG: fbc:FB2170_14003 putative steroid delta-isomerase domain-containing protein; PFAM: Protein of unknown function DUF1486; SPTR: Putative steroid delta-isomerase domain protein; hypothetical protein 110899..112419 Muricauda ruestringensis DSM 13258 11052913 YP_004786586.1 CDS Murru_0107 NC_015945.1 112457 113788 D PFAM: Peptidase family M28; COGs: COG2234 aminopeptidase; InterPro IPR003961:IPR007484; KEGG: fbc:FB2170_14008 leucine aminopeptidase-like protein; PFAM: Peptidase M28; Fibronectin, type III; SMART: Fibronectin, type III; SPTR: Leucine aminopeptidase-related protein; peptidase M28 112457..113788 Muricauda ruestringensis DSM 13258 11052914 YP_004786587.1 CDS Murru_0108 NC_015945.1 113975 115585 D PFAM: Peptidase family M1; COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: fbc:FB2170_14013 aminopeptidase M1 family protein; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; SPTR: Aminopeptidase M1 family protein; peptidase M1 membrane alanine aminopeptidase 113975..115585 Muricauda ruestringensis DSM 13258 11052915 YP_004786588.1 CDS Murru_0109 NC_015945.1 115770 119153 R PFAM: Trehalose utilisation; PKD domain; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR022409:IPR000601:IPR003088; KEGG: fbc:FB2170_14068 putative glycosyl hydrolase; PFAM: PKD domain; Cytochrome c, class I; SMART: PKD/Chitinase domain; SPTR: Putative glycosyl hydrolase (Putative secreted protein); PKD domain-containing protein complement(115770..119153) Muricauda ruestringensis DSM 13258 11052916 YP_004786589.1 CDS Murru_0110 NC_015945.1 119377 120687 R PFAM: Major Facilitator Superfamily; COGs: COG2271 Sugar phosphate permease; InterPro IPR011701; KEGG: fbc:FB2170_09426 major facilitator superfamily transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily (MFS_1) transporter; major facilitator superfamily protein complement(119377..120687) Muricauda ruestringensis DSM 13258 11052917 YP_004786590.1 CDS Murru_0111 NC_015945.1 120736 122142 D PFAM: Amidohydrolase family; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: zpr:ZPR_2069 putative amidohydrolase family protein; PFAM: Amidohydrolase 1; SPTR: Putative amidohydrolase family protein; amidohydrolase 120736..122142 Muricauda ruestringensis DSM 13258 11052918 YP_004786591.1 CDS Murru_0112 NC_015945.1 122237 122929 D PFAM: Protein of unknown function (DUF2490); InterPro IPR019619; KEGG: rbi:RB2501_00581 hypothetical protein; PFAM: Protein of unknown function DUF2490; SPTR: Putative uncharacterized protein; hypothetical protein 122237..122929 Muricauda ruestringensis DSM 13258 11052919 YP_004786592.1 CDS Murru_0113 NC_015945.1 122994 123581 D PFAM: Copper/zinc superoxide dismutase (SODC); COGs: COG2032 Cu/Zn superoxide dismutase; InterPro IPR001424; KEGG: rbi:RB2501_00596 copper/zinc superoxide dismutase; PFAM: Superoxide dismutase, copper/zinc binding; SPTR: Superoxide dismutase [Cu-Zn]; superoxide dismutase copper/zinc binding protein 122994..123581 Muricauda ruestringensis DSM 13258 11052920 YP_004786593.1 CDS Murru_0114 NC_015945.1 123686 124312 D PFAM: YceI-like domain; InterPro IPR007372; KEGG: fbc:FB2170_14108 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: Putative uncharacterized protein; hypothetical protein 123686..124312 Muricauda ruestringensis DSM 13258 11052921 YP_004786594.1 CDS Murru_0115 NC_015945.1 124389 124916 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR007630; KEGG: rbi:RB2501_00601 putative RNA polymerase sigma factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 4; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 124389..124916 Muricauda ruestringensis DSM 13258 11052922 YP_004786595.1 CDS Murru_0116 NC_015945.1 124919 125716 D PFAM: Anti-sigma-K factor rskA; InterPro IPR018764; KEGG: rbi:RB2501_00606 hypothetical protein; PFAM: Anti-sigma K factor RskA; SPTR: Putative uncharacterized protein; anti-sigma-K factor RskA 124919..125716 Muricauda ruestringensis DSM 13258 11052923 YP_004786596.1 CDS Murru_0117 NC_015945.1 125713 126693 R PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA); COGs: COG0598 Mg2+ and Co2+ transporter; InterPro IPR002523; KEGG: zpr:ZPR_2010 magnesium and cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like; SPTR: Mg and Co transport protein CorA; Mg2 transporter protein CorA family protein complement(125713..126693) Muricauda ruestringensis DSM 13258 11052924 YP_004786597.1 CDS Murru_0118 NC_015945.1 126764 127300 D PFAM: Mechanosensitive ion channel; InterPro IPR006685; KEGG: zpr:ZPR_2321 small-conductance mechanosensitive ion channel protein; PFAM: Mechanosensitive ion channel MscS; SPTR: Putative uncharacterized protein; mechanosensitive ion channel protein MscS 126764..127300 Muricauda ruestringensis DSM 13258 11052925 YP_004786598.1 CDS Murru_0119 NC_015945.1 127391 128680 R InterPro IPR019734; KEGG: rbi:RB2501_00621 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(127391..128680) Muricauda ruestringensis DSM 13258 11052926 YP_004786599.1 CDS Murru_0120 NC_015945.1 128856 129596 R KEGG: rbi:RB2501_00626 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(128856..129596) Muricauda ruestringensis DSM 13258 11052927 YP_004786600.1 CDS Murru_0121 NC_015945.1 129617 130309 R KEGG: rbi:RB2501_00631 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(129617..130309) Muricauda ruestringensis DSM 13258 11052928 YP_004786601.1 CDS Murru_0122 NC_015945.1 130476 131666 D PFAM: LETM1-like protein; InterPro IPR011685; KEGG: fbc:FB2170_14113 hypothetical protein; PFAM: LETM1-like; SPTR: Putative uncharacterized protein; LETM1-like domain-containing protein 130476..131666 Muricauda ruestringensis DSM 13258 11052929 YP_004786602.1 CDS Murru_0123 NC_015945.1 131757 132512 R PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: fbc:FB2170_14118 two-component system response regulator; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Two-component system response regulator; LytTR family two component transcriptional regulator complement(131757..132512) Muricauda ruestringensis DSM 13258 11052930 YP_004786603.1 CDS Murru_0124 NC_015945.1 132553 132837 R KEGG: fbc:FB2170_14123 hypothetical protein; SPTR: Putative integron gene cassette protein; hypothetical protein complement(132553..132837) Muricauda ruestringensis DSM 13258 11052931 YP_004786604.1 CDS Murru_0125 NC_015945.1 132843 133175 R KEGG: fbc:FB2170_14128 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(132843..133175) Muricauda ruestringensis DSM 13258 11052932 YP_004786605.1 CDS Murru_0126 NC_015945.1 133180 133485 R KEGG: fbc:FB2170_14128 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(133180..133485) Muricauda ruestringensis DSM 13258 11052933 YP_004786606.1 CDS Murru_0127 NC_015945.1 133488 133832 R KEGG: fbc:FB2170_14133 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(133488..133832) Muricauda ruestringensis DSM 13258 11052934 YP_004786607.1 CDS Murru_0129 NC_015945.1 134431 135759 R PFAM: Histidine kinase; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: rbi:RB2501_00661 hypothetical protein; PFAM: Signal transduction histidine kinase, internal region; SPTR: Putative uncharacterized protein; putative signal transduction histidine kinase complement(134431..135759) Muricauda ruestringensis DSM 13258 11052936 YP_004786608.1 CDS Murru_0130 NC_015945.1 135766 136389 R KEGG: fbc:FB2170_14143 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(135766..136389) Muricauda ruestringensis DSM 13258 11052937 YP_004786609.1 CDS Murru_0131 NC_015945.1 136700 137311 D PFAM: Putative FMN-binding domain; COGs: COG2808 Transcriptional regulator; InterPro IPR007396; KEGG: fbc:FB2170_14218 putative transcriptional regulator; PFAM: Negative transcriptional regulator; SPTR: Probable transcriptional regulator; FMN-binding negative transcriptional regulator 136700..137311 Muricauda ruestringensis DSM 13258 11052938 YP_004786610.1 CDS Murru_0132 NC_015945.1 137315 139102 R PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: rbi:RB2501_06865 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein complement(137315..139102) Muricauda ruestringensis DSM 13258 11052939 YP_004786611.1 CDS Murru_0133 NC_015945.1 139375 139854 D PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: sli:Slin_6080 transcriptional regulator, MarR family with acetyltransferase activity; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Transcriptional regulator, MarR family; N-acetyltransferase GCN5 139375..139854 Muricauda ruestringensis DSM 13258 11052940 YP_004786612.1 CDS Murru_0134 NC_015945.1 139973 140395 D PFAM: DoxX; InterPro IPR011637; KEGG: fjo:Fjoh_2545 DoxX family protein; PFAM: Uncharacterised protein family YphA; SPTR: DoxX family protein; DoxX family protein 139973..140395 Muricauda ruestringensis DSM 13258 11052941 YP_004786613.1 CDS Murru_0135 NC_015945.1 140397 142559 R PFAM: TonB-dependent Receptor Plug Domain; InterPro IPR012910; KEGG: fbc:FB2170_14293 hypothetical protein; PFAM: TonB-dependent receptor, plug; SPTR: Putative uncharacterized protein; TonB-dependent receptor plug complement(140397..142559) Muricauda ruestringensis DSM 13258 11052942 YP_004786614.1 CDS Murru_0136 NC_015945.1 142773 143192 D PFAM: Uncharacterized protein conserved in bacteria (DUF2141); COGs: COG4704 conserved hypothetical protein; InterPro IPR018673; KEGG: rbi:RB2501_00691 hypothetical protein; PFAM: Protein of unknown function DUF2141; SPTR: Putative uncharacterized protein; hypothetical protein 142773..143192 Muricauda ruestringensis DSM 13258 11052943 YP_004786615.1 CDS Murru_0137 NC_015945.1 143471 144412 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: fbc:FB2170_14333 LysR family transcriptional regulator; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; SPTR: Transcriptional regulator, LysR family protein; LysR family transcriptional regulator 143471..144412 Muricauda ruestringensis DSM 13258 11052944 YP_004786616.1 CDS Murru_0138 NC_015945.1 144445 144642 R KEGG: fbc:FB2170_14343 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(144445..144642) Muricauda ruestringensis DSM 13258 11052945 YP_004786617.1 CDS Murru_0139 NC_015945.1 144764 146047 D PFAM: D-Ala-D-Ala carboxypeptidase 3 (S13) family; COGs: COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4); InterPro IPR000667; KEGG: fbc:FB2170_14348 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; SPTR: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; peptidase S13 D-Ala-D-Ala carboxypeptidase C 144764..146047 Muricauda ruestringensis DSM 13258 11052946 YP_004786618.1 CDS Murru_0140 NC_015945.1 146041 146745 R PFAM: NUDIX domain; TIGRFAM: nudix-type nucleoside diphosphatase, YffH/AdpP family; InterPro IPR004385:IPR000086; KEGG: fbc:FB2170_14353 hypothetical protein; PFAM: NUDIX hydrolase domain; SPTR: Putative uncharacterized protein; TIGRFAM: Nucleoside diphosphate pyrophosphatase; nucleoside diphosphate pyrophosphatase complement(146041..146745) Muricauda ruestringensis DSM 13258 11052947 YP_004786619.1 CDS Murru_0141 NC_015945.1 146756 148312 D PFAM: MlrC C-terminus; Protein of unknown function (DUF1485); COGs: COG5476 conserved hypothetical protein; InterPro IPR015995:IPR010799; KEGG: rbi:RB2501_00721 hypothetical protein; PFAM: Microcystin LR degradation protein MlrC, N-terminal; Microcystin LR degradation protein MlrC, C-terminal; SPTR: Putative uncharacterized protein; microcystin LR degradation protein MlrC 146756..148312 Muricauda ruestringensis DSM 13258 11052948 YP_004786620.1 CDS Murru_0142 NC_015945.1 148309 148962 R PFAM: Conserved hypothetical protein (DUF2461); TIGRFAM: TIGR02453 family protein; COGs: COG5587 conserved hypothetical protein; InterPro IPR012808; KEGG: gfo:GFO_0463 hypothetical protein; PFAM: Conserved hypothetical protein CHP02453; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02453; hypothetical protein complement(148309..148962) Muricauda ruestringensis DSM 13258 11052949 YP_004786621.1 CDS Murru_0143 NC_015945.1 149035 149397 R PFAM: S23 ribosomal protein; InterPro IPR008815; KEGG: fba:FIC_01190 S23 ribosomal protein; PFAM: 23S rRNA-associated protein; SPTR: S23 ribosomal protein; S23 ribosomal protein complement(149035..149397) Muricauda ruestringensis DSM 13258 11052950 YP_004786622.1 CDS Murru_0144 NC_015945.1 149466 150266 R PFAM: Protein of unknown function DUF124; TIGRFAM: TIGR00266 family protein; COGs: COG2013 conserved hypothetical protein; InterPro IPR002838; KEGG: fbc:FB2170_14358 hypothetical protein; PFAM: Protein of unknown function DUF124; SPTR: Putative uncharacterized protein; TIGRFAM: Protein of unknown function DUF124; hypothetical protein complement(149466..150266) Muricauda ruestringensis DSM 13258 11052951 YP_004786623.1 CDS Murru_0145 NC_015945.1 150351 150806 R KEGG: cat:CA2559_09568 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(150351..150806) Muricauda ruestringensis DSM 13258 11052952 YP_004786624.1 CDS Murru_0146 NC_015945.1 150974 151456 D COGs: COG3296 conserved hypothetical protein; KEGG: fbc:FB2170_14368 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 150974..151456 Muricauda ruestringensis DSM 13258 11052953 YP_004786625.1 CDS Murru_0147 NC_015945.1 151456 152256 D PFAM: Domain of unknown function (DUF3471); KEGG: cpi:Cpin_6175 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 151456..152256 Muricauda ruestringensis DSM 13258 11052954 YP_004786626.1 CDS Murru_0148 NC_015945.1 152502 152831 D PFAM: Transcriptional regulator PadR-like family; COGs: COG1695 transcriptional regulator protein; InterPro IPR005149; KEGG: fbc:FB2170_14378 putative PadR family transcriptional regulatory protein; PFAM: Transcription regulator PadR N-terminal-like; SPTR: Putative uncharacterized protein; PadR-like family transcriptional regulator 152502..152831 Muricauda ruestringensis DSM 13258 11052955 YP_004786627.1 CDS Murru_0149 NC_015945.1 152841 154568 D PFAM: PspC domain; COGs: COG1983 Putative stress-responsive transcriptional regulator protein; InterPro IPR007168; KEGG: fbc:FB2170_14383 hypothetical protein; PFAM: Phage shock domain; SPTR: Putative uncharacterized protein; phage shock protein PspC 152841..154568 Muricauda ruestringensis DSM 13258 11052956 YP_004786628.1 CDS Murru_0150 NC_015945.1 154607 155209 D PFAM: Protein of unknown function (DUF2807); KEGG: phe:Phep_1934 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 154607..155209 Muricauda ruestringensis DSM 13258 11052957 YP_004786629.1 CDS Murru_0151 NC_015945.1 155416 156138 D PFAM: Protein of unknown function (DUF2807); KEGG: rbi:RB2501_00761 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 155416..156138 Muricauda ruestringensis DSM 13258 11052958 YP_004786630.1 CDS Murru_0152 NC_015945.1 156164 156388 D hypothetical protein 156164..156388 Muricauda ruestringensis DSM 13258 11052959 YP_004786631.1 CDS Murru_0153 NC_015945.1 156429 157439 D PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR013342; KEGG: fbc:FB2170_14398 chloromuconate cycloisomerase YkfB1; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: Chloromuconate cycloisomerase YkfB1; mandelate racemase/muconate lactonizing protein 156429..157439 Muricauda ruestringensis DSM 13258 11052960 YP_004786632.1 CDS Murru_0154 NC_015945.1 157439 158500 D COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839; KEGG: fbc:FB2170_14403 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/classII; SPTR: 8-amino-7-oxononanoate synthase; class I and II aminotransferase 157439..158500 Muricauda ruestringensis DSM 13258 11052961 YP_004786633.1 CDS Murru_0155 NC_015945.1 158545 159747 D PFAM: NlpC/P60 family; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: gfo:GFO_3330 NlpC/P60 family protein; PFAM: NLP/P60; SPTR: NlpC/P60 family protein; NLP/P60 protein 158545..159747 Muricauda ruestringensis DSM 13258 11052962 YP_004786634.1 CDS Murru_0156 NC_015945.1 159822 161213 R KEGG: zpr:ZPR_3797 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(159822..161213) Muricauda ruestringensis DSM 13258 11052963 YP_004786635.1 CDS Murru_0157 NC_015945.1 161225 164392 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: zpr:ZPR_3798 putative outer membrane protein, probably involved in nutrient binding; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein, probably involved in nutrient binding; TonB-dependent receptor plug complement(161225..164392) Muricauda ruestringensis DSM 13258 11052964 YP_004786636.1 CDS Murru_0158 NC_015945.1 164687 165130 D KEGG: fbc:FB2170_14408 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 164687..165130 Muricauda ruestringensis DSM 13258 11052965 YP_004786637.1 CDS Murru_0159 NC_015945.1 165301 166269 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; COGs: COG0492 Thioredoxin reductase; InterPro IPR005982:IPR013027; KEGG: fbc:FB2170_14413 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Thioredoxin-disulfide reductase; SPTR: Thioredoxin reductase; TIGRFAM: Thioredoxin reductase; thioredoxin reductase complement(165301..166269) Muricauda ruestringensis DSM 13258 11052966 YP_004786638.1 CDS Murru_0160 NC_015945.1 166819 168189 R PFAM: RimK-like ATP-grasp domain; Protein of unknown function (DUF785); TIGRFAM: alpha-L-glutamate ligases, RimK family; COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR004666:IPR008503:IPR013651; KEGG: rbi:RB2501_05245 putative ribosomal protein S6 modification protein; PFAM: ATP-grasp fold, RimK-type; Protein of unknown function DUF785; SPTR: Alpha-L-glutamate ligase, RimK family; TIGRFAM: S6 modification enzyme RimK; RimK family alpha-L-glutamate ligase complement(166819..168189) Muricauda ruestringensis DSM 13258 11052967 YP_004786639.1 CDS Murru_0161 NC_015945.1 168203 168988 R PFAM: Uncharacterised ACR, YagE family COG1723; COGs: COG1723 conserved hypothetical protein; InterPro IPR003734; KEGG: cat:CA2559_00505 hypothetical protein; PFAM: Protein of unknown function DUF155; SPTR: Putative uncharacterized protein; hypothetical protein complement(168203..168988) Muricauda ruestringensis DSM 13258 11052968 YP_004786640.1 CDS Murru_0162 NC_015945.1 169172 169480 R KEGG: gfo:GFO_1491 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(169172..169480) Muricauda ruestringensis DSM 13258 11052969 YP_004786641.1 CDS Murru_0163 NC_015945.1 169483 170457 R PFAM: Deoxyhypusine synthase; TIGRFAM: deoxyhypusine synthase; COGs: COG1899 Deoxyhypusine synthase; InterPro IPR002773; KEGG: cat:CA2559_00515 hypothetical protein; PFAM: Deoxyhypusine synthase; SPTR: Deoxyhypusine synthase; deoxyhypusine synthase complement(169483..170457) Muricauda ruestringensis DSM 13258 11052970 YP_004786642.1 CDS Murru_0164 NC_015945.1 170511 171383 R PFAM: Arginase family; TIGRFAM: agmatinase; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR005925:IPR006035; KEGG: cat:CA2559_00520 arginase; PFAM: Ureohydrolase; PRIAM: Agmatinase; SPTR: Arginase; TIGRFAM: Putative agmatinase; agmatinase complement(170511..171383) Muricauda ruestringensis DSM 13258 11052971 YP_004786643.1 CDS Murru_0165 NC_015945.1 171564 173018 R PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR022644:IPR022643; KEGG: cat:CA2559_00525 putative arginine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal; Orn/DAP/Arg decarboxylase 2, C-terminal; SPTR: Putative arginine decarboxylase; Orn/DAP/Arg decarboxylase 2, N-terminal complement(171564..173018) Muricauda ruestringensis DSM 13258 11052972 YP_004786644.1 CDS Murru_0166 NC_015945.1 173482 175686 R PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR006311:IPR008274; KEGG: rbi:RB2501_02795 isoquinoline 1-oxidoreductase subunit beta; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; PRIAM: Isoquinoline 1-oxidoreductase; SPTR: Isoquinoline 1-oxidoreductase, beta subunit; Isoquinoline 1-oxidoreductase complement(173482..175686) Muricauda ruestringensis DSM 13258 11052973 YP_004786645.1 CDS Murru_0167 NC_015945.1 175704 176159 R PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR001041:IPR002888; KEGG: rbi:RB2501_01016 isoquinoline 1-oxidoreductase subunit alpha; PFAM: [2Fe-2S]-binding; Ferredoxin; PRIAM: Isoquinoline 1-oxidoreductase; SPTR: Isoquinoline 1-oxidoreductase, alpha subunit; Isoquinoline 1-oxidoreductase complement(175704..176159) Muricauda ruestringensis DSM 13258 11052974 YP_004786646.1 CDS Murru_0168 NC_015945.1 176353 177183 R PFAM: Endonuclease/Exonuclease/phosphatase family; COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: zpr:ZPR_3540 endonuclease/exonuclease/phosphatase family protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase family protein; endonuclease/exonuclease/phosphatase complement(176353..177183) Muricauda ruestringensis DSM 13258 11052975 YP_004786647.1 CDS Murru_0169 NC_015945.1 177603 178598 D KEGG: mtt:Ftrac_3621 hypothetical protein; SPTR: Putative outer membrane insertion C-signal; hypothetical protein 177603..178598 Muricauda ruestringensis DSM 13258 11052976 YP_004786648.1 CDS Murru_0170 NC_015945.1 178588 180129 D PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: mtt:Ftrac_3622 phosphoesterase pa-phosphatase related protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: Vanadium chloroperoxidase-related protein; phosphoesterase PA-phosphatase-like protein 178588..180129 Muricauda ruestringensis DSM 13258 11052977 YP_004786649.1 CDS Murru_0171 NC_015945.1 180130 180741 R PFAM: 2OG-Fe(II) oxygenase superfamily; COGs: COG3145 Alkylated DNA repair protein; InterPro IPR005123; KEGG: fjo:Fjoh_1572 2OG-Fe(II) oxygenase; PFAM: Oxoglutarate/iron-dependent oxygenase; SPTR: DNA-N1-methyladenine dioxygenase; 2OG-Fe(II) oxygenase complement(180130..180741) Muricauda ruestringensis DSM 13258 11052978 YP_004786650.1 CDS Murru_0172 NC_015945.1 180710 180976 R PFAM: Metal binding domain of Ada; KEGG: fjo:Fjoh_1573 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(180710..180976) Muricauda ruestringensis DSM 13258 11052979 YP_004786651.1 CDS Murru_0173 NC_015945.1 180978 181691 R PFAM: Uncharacterized protein conserved in bacteria (DUF2086); COGs: COG3826 conserved hypothetical protein; InterPro IPR006620:IPR018655; KEGG: fjo:Fjoh_1574 hypothetical protein; PFAM: Protein of unknown function DUF2086; SMART: Prolyl 4-hydroxylase, alpha subunit; SPTR: Uncharacterized protein; hypothetical protein complement(180978..181691) Muricauda ruestringensis DSM 13258 11052980 YP_004786652.1 CDS Murru_0174 NC_015945.1 181728 182576 R PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; TIGRFAM: O-6-methylguanine DNA methyltransferase; COGs: COG0350 Methylated DNA-protein cysteine methyltransferase; InterPro IPR018060:IPR014048:IPR000005; KEGG: fjo:Fjoh_1575 methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: DNA-O6-methylguanine--protein-cysteine S-methyltransferase / Transcriptional regulator Ada; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; AraC family transcriptional regulator complement(181728..182576) Muricauda ruestringensis DSM 13258 11052981 YP_004786653.1 CDS Murru_0175 NC_015945.1 182656 183684 R PFAM: HTH domain; COGs: COG2378 transcriptional regulator protein; InterPro IPR001034:IPR013196; KEGG: fjo:Fjoh_0788 helix-turn-helix, type 11 domain-containing protein; SMART: HTH transcriptional regulator, DeoR N-terminal; SPTR: Transcriptional regulator, DeoR family protein; regulatory protein DeoR complement(182656..183684) Muricauda ruestringensis DSM 13258 11052982 YP_004786654.1 CDS Murru_0176 NC_015945.1 183854 184348 D PFAM: DinB family; COGs: COG2318 conserved hypothetical protein; InterPro IPR007837; KEGG: fjo:Fjoh_0790 DinB family protein; PFAM: DinB; SPTR: Putative uncharacterized protein; DinB family protein 183854..184348 Muricauda ruestringensis DSM 13258 11052983 YP_004786655.1 CDS Murru_0177 NC_015945.1 184361 184579 D KEGG: fjo:Fjoh_2550 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 184361..184579 Muricauda ruestringensis DSM 13258 11052984 YP_004786656.1 CDS Murru_0178 NC_015945.1 184694 187708 R PFAM: BNR/Asp-box repeat; KEGG: sus:Acid_5900 hypothetical protein; SPTR: Glycosyl hydrolase, BNR repeat-containing protein; hypothetical protein complement(184694..187708) Muricauda ruestringensis DSM 13258 11052985 YP_004786657.1 CDS Murru_0179 NC_015945.1 187962 188399 D KEGG: gfo:GFO_0612 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 187962..188399 Muricauda ruestringensis DSM 13258 11052986 YP_004786658.1 CDS Murru_0180 NC_015945.1 189403 190383 R PFAM: DJ-1/PfpI family; Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR018060:IPR002818:IPR000005; KEGG: chu:CHU_3787 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; ThiJ/PfpI; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family with amidase-like domain; AraC family transcriptional regulator complement(189403..190383) Muricauda ruestringensis DSM 13258 11052987 YP_004786659.1 CDS Murru_0181 NC_015945.1 190536 191069 D PFAM: RibD C-terminal domain; COGs: COG0262 Dihydrofolate reductase; InterPro IPR002734; KEGG: lic:LIC10659 hypothetical protein; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; SPTR: Putative uncharacterized protein; bifunctional deaminase-reductase domain-containing protein 190536..191069 Muricauda ruestringensis DSM 13258 11052988 YP_004786660.1 CDS Murru_0182 NC_015945.1 191071 191580 D KEGG: phe:Phep_1306 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 191071..191580 Muricauda ruestringensis DSM 13258 11052989 YP_004786661.1 CDS Murru_0183 NC_015945.1 191570 191986 D COGs: COG3607 lactoylglutathione lyase; InterPro IPR004360; KEGG: cpi:Cpin_6132 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase; bleomycin resistance protein 191570..191986 Muricauda ruestringensis DSM 13258 11052990 YP_004786662.1 CDS Murru_0184 NC_015945.1 192031 192441 D COGs: COG3607 lactoylglutathione lyase; KEGG: bbe:BBR47_14640 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 192031..192441 Muricauda ruestringensis DSM 13258 11052991 YP_004786663.1 CDS Murru_0185 NC_015945.1 192575 192997 D PFAM: 3-demethylubiquinone-9 3-methyltransferase; COGs: COG2764 conserved hypothetical protein; InterPro IPR004360; KEGG: dfe:Dfer_5411 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Putative uncharacterized protein; bleomycin resistance protein 192575..192997 Muricauda ruestringensis DSM 13258 11052992 YP_004786664.1 CDS Murru_0186 NC_015945.1 193026 193328 D KEGG: cpi:Cpin_5777 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 193026..193328 Muricauda ruestringensis DSM 13258 11052993 YP_004786665.1 CDS Murru_0187 NC_015945.1 193360 193770 D KEGG: chl:Chy400_2639 hypothetical protein; SPTR: Putative DNA-binding protein; hypothetical protein 193360..193770 Muricauda ruestringensis DSM 13258 11052994 YP_004786666.1 CDS Murru_0188 NC_015945.1 194126 194992 R PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR014284:IPR009042:IPR007627:IPR007624:IPR 007630; KEGG: rbi:RB2501_15004 putative sigma factor A; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 4; SPTR: Putative sigma factor A; TIGRFAM: RNA polymerase sigma-70; RpoD subfamily RNA polymerase sigma-70 subunit complement(194126..194992) Muricauda ruestringensis DSM 13258 11052995 YP_004786667.1 CDS Murru_0189 NC_015945.1 195008 195742 R PFAM: Protein of unknown function DUF88; InterPro IPR021139; KEGG: mtt:Ftrac_2290 hypothetical protein; PFAM: Domain of unknown function DUF88; SPTR: Protein containing DUF88; hypothetical protein complement(195008..195742) Muricauda ruestringensis DSM 13258 11052996 YP_004786668.1 CDS Murru_0190 NC_015945.1 195751 195945 R PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; KEGG: coc:Coch_0829 30S ribosomal protein S21; SPTR: 30S ribosomal protein S21; 30S ribosomal protein S21 complement(195751..195945) Muricauda ruestringensis DSM 13258 11052997 YP_004786669.1 CDS Murru_0191 NC_015945.1 196703 197956 R KEGG: fbc:FB2170_15283 putative outer membrane protein; SPTR: Putative outer membrane protein; putative outer membrane protein complement(196703..197956) Muricauda ruestringensis DSM 13258 11052998 YP_004786670.1 CDS Murru_0192 NC_015945.1 197937 199268 R KEGG: fbc:FB2170_15278 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(197937..199268) Muricauda ruestringensis DSM 13258 11052999 YP_004786671.1 CDS Murru_0193 NC_015945.1 199526 200377 D KEGG: fjo:Fjoh_1684 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 199526..200377 Muricauda ruestringensis DSM 13258 11053000 YP_004786672.1 CDS Murru_0194 NC_015945.1 200403 201398 D InterPro IPR006652; KEGG: fbc:FB2170_15273 hypothetical protein; PFAM: Kelch repeat type 1; SPTR: Putative uncharacterized protein; Kelch repeat type 1-containing protein 200403..201398 Muricauda ruestringensis DSM 13258 11053001 YP_004786673.1 CDS Murru_0195 NC_015945.1 201438 201764 D KEGG: fjo:Fjoh_1682 hypothetical protein; SPTR: Hypothetical lipoprotein; hypothetical protein 201438..201764 Muricauda ruestringensis DSM 13258 11053002 YP_004786674.1 CDS Murru_0196 NC_015945.1 201761 202789 D PFAM: Histidine kinase; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: fjo:Fjoh_1681 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Signal transduction histidine kinase, LytS; putative signal transduction histidine kinase 201761..202789 Muricauda ruestringensis DSM 13258 11053003 YP_004786675.1 CDS Murru_0197 NC_015945.1 202791 203528 D PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: fbc:FB2170_15253 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SMART: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SPTR: Two-component system response regulator; LytTR family two component transcriptional regulator 202791..203528 Muricauda ruestringensis DSM 13258 11053004 YP_004786676.1 CDS Murru_0198 NC_015945.1 203629 204252 D PFAM: Bacterial regulatory proteins, tetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: cpi:Cpin_2914 transcriptional regulator, TetR family; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; TetR family transcriptional regulator 203629..204252 Muricauda ruestringensis DSM 13258 11053005 YP_004786677.1 CDS Murru_0199 NC_015945.1 204249 205589 D PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; KEGG: ppn:Palpr_2718 outer membrane efflux protein; SPTR: Outer membrane efflux protein; outer membrane efflux protein 204249..205589 Muricauda ruestringensis DSM 13258 11053006 YP_004786678.1 CDS Murru_0200 NC_015945.1 205570 206490 D PFAM: HlyD family secretion protein; COGs: COG1566 Multidrug resistance efflux pump; KEGG: cts:Ctha_1317 putative ABC transport system, lipoprotein; SPTR: Putative ABC transport system, lipoprotein; putative ABC transport system, lipoprotein 205570..206490 Muricauda ruestringensis DSM 13258 11053007 YP_004786679.1 CDS Murru_0201 NC_015945.1 206514 207383 D KEGG: fba:FIC_01675 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 206514..207383 Muricauda ruestringensis DSM 13258 11053008 YP_004786680.1 CDS Murru_0202 NC_015945.1 207427 208332 D PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: coc:Coch_0115 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; sulfate-transporting ATPase 207427..208332 Muricauda ruestringensis DSM 13258 11053009 YP_004786681.1 CDS Murru_0203 NC_015945.1 208329 209057 D PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: dfe:Dfer_5639 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; sulfate-transporting ATPase 208329..209057 Muricauda ruestringensis DSM 13258 11053010 YP_004786682.1 CDS Murru_0204 NC_015945.1 209070 210176 D PFAM: ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525; KEGG: cts:Ctha_1313 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; ABC transporter 209070..210176 Muricauda ruestringensis DSM 13258 11053011 YP_004786683.1 CDS Murru_0205 NC_015945.1 210178 211299 D PFAM: ABC-2 type transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525; KEGG: cts:Ctha_1312 ABC-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2; ABC transporter 210178..211299 Muricauda ruestringensis DSM 13258 11053012 YP_004786684.1 CDS Murru_0206 NC_015945.1 211299 212066 D PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein; COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: chu:CHU_3379 hypothetical protein; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; SPTR: Putative uncharacterized protein; TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; hypothetical protein 211299..212066 Muricauda ruestringensis DSM 13258 11053013 YP_004786685.1 CDS Murru_0207 NC_015945.1 212012 212455 D KEGG: fba:FIC_01674 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 212012..212455 Muricauda ruestringensis DSM 13258 11053014 YP_004786686.1 CDS Murru_0208 NC_015945.1 212452 212904 D PFAM: Uncharacterized protein conserved in bacteria (DUF2141); COGs: COG4704 conserved hypothetical protein; InterPro IPR018673; KEGG: mtt:Ftrac_2693 hypothetical protein; PFAM: Protein of unknown function DUF2141; SPTR: Putative uncharacterized protein; hypothetical protein 212452..212904 Muricauda ruestringensis DSM 13258 11053015 YP_004786687.1 CDS Murru_0209 NC_015945.1 212905 213798 D SPTR: Putative uncharacterized protein; hypothetical protein 212905..213798 Muricauda ruestringensis DSM 13258 11053016 YP_004786688.1 CDS Murru_0210 NC_015945.1 213809 214651 D PFAM: ATP cone domain; Restriction endonuclease; InterPro IPR007560; KEGG: zpr:ZPR_3407 putative nuclease; PFAM: Restriction endonuclease, type IV-like, Mrr; SPTR: Putative uncharacterized protein; restriction endonuclease 213809..214651 Muricauda ruestringensis DSM 13258 11053017 YP_004786689.1 CDS Murru_0211 NC_015945.1 214659 215261 D KEGG: cpi:Cpin_1413 metal dependent phosphohydrolase; SPTR: Metal dependent phosphohydrolase; metal dependent phosphohydrolase 214659..215261 Muricauda ruestringensis DSM 13258 11053018 YP_004786690.1 CDS Murru_0212 NC_015945.1 215336 217189 R PFAM: Sulfate transporter family; STAS domain; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547:IPR002645; KEGG: fbc:FB2170_06670 sulfate transporter/antisigma-factor antagonist; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Sulfate transporter/antisigma-factor antagonist STAS; sulfate transporter complement(215336..217189) Muricauda ruestringensis DSM 13258 11053019 YP_004786691.1 CDS Murru_0213 NC_015945.1 217437 217838 R KEGG: rbi:RB2501_10807 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(217437..217838) Muricauda ruestringensis DSM 13258 11053020 YP_004786692.1 CDS Murru_0214 NC_015945.1 217835 218254 R PFAM: Transcription elongation factor, GreA/GreB, C-term; COGs: COG0782 Transcription elongation factor; InterPro IPR001437; KEGG: rbi:RB2501_10812 nucleoside diphosphate kinase regulator; PFAM: Transcription elongation factor, GreA/GreB, C-terminal; SPTR: Transcription elongation factor; GreA/GreB family elongation factor complement(217835..218254) Muricauda ruestringensis DSM 13258 11053021 YP_004786693.1 CDS Murru_0215 NC_015945.1 218326 219618 R PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006096:IPR006097; KEGG: rbi:RB2501_10817 glutamate dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; PRIAM: Glutamate dehydrogenase (NAD(P)(+)); SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; SPTR: Glutamate dehydrogenase; glutamate dehydrogenase (NAD(P)(+)) complement(218326..219618) Muricauda ruestringensis DSM 13258 11053022 YP_004786694.1 CDS Murru_0216 NC_015945.1 219661 219819 R hypothetical protein complement(219661..219819) Muricauda ruestringensis DSM 13258 11053023 YP_004786695.1 CDS Murru_0217 NC_015945.1 219853 220065 R hypothetical protein complement(219853..220065) Muricauda ruestringensis DSM 13258 11053024 YP_004786696.1 CDS Murru_0218 NC_015945.1 220284 221612 R PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078:IPR002197; KEGG: rbi:RB2501_10832 two component, sigma54 specific, transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family protein; two component sigma-54 specific Fis family transcriptional regulator complement(220284..221612) Muricauda ruestringensis DSM 13258 11053025 YP_004786697.1 CDS Murru_0219 NC_015945.1 221618 222736 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: rbi:RB2501_10837 sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Sensor histidine kinase; histidine kinase complement(221618..222736) Muricauda ruestringensis DSM 13258 11053026 YP_004786698.1 CDS Murru_0220 NC_015945.1 223446 225158 D KEGG: bpl:BURPS1106A_3673 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 223446..225158 Muricauda ruestringensis DSM 13258 11053027 YP_004786699.1 CDS Murru_0221 NC_015945.1 225235 226122 D PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); InterPro IPR007409; KEGG: sbm:Shew185_2567 hypothetical protein; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; SPTR: Putative uncharacterized protein; Restriction endonuclease, type I, EcoRI, R subunit/Type III 225235..226122 Muricauda ruestringensis DSM 13258 11053028 YP_004786700.1 CDS Murru_0222 NC_015945.1 226383 226601 D PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: pdi:BDI_2133 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; helix-turn-helix domain-containing protein 226383..226601 Muricauda ruestringensis DSM 13258 11053029 YP_004786701.1 CDS Murru_0223 NC_015945.1 226594 227829 D PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm); COGs: COG0270 Site-specific DNA methylase; InterPro IPR001525; KEGG: bth:BT_4754 putative cytosine-specific methyltransferase; PFAM: C-5 cytosine methyltransferase; SPTR: Cytosine-specific methyltransferase; TIGRFAM: C-5 cytosine methyltransferase; DNA-cytosine methyltransferase 226594..227829 Muricauda ruestringensis DSM 13258 11053030 YP_004786702.1 CDS Murru_0224 NC_015945.1 227832 230201 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594; KEGG: pap:PSPA7_2516 putative prophage encoded two-component system histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Two-component system sensor histidine kinase; histidine kinase 227832..230201 Muricauda ruestringensis DSM 13258 11053031 YP_004786703.1 CDS Murru_0225 NC_015945.1 230198 231109 D KEGG: yen:YE1683 putative prophage encoded two-component system response regulator; SPTR: Putative uncharacterized protein; hypothetical protein 230198..231109 Muricauda ruestringensis DSM 13258 11053032 YP_004786704.1 CDS Murru_0226 NC_015945.1 231363 232460 R KEGG: zpr:ZPR_4419 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(231363..232460) Muricauda ruestringensis DSM 13258 11053033 YP_004786705.1 CDS Murru_0227 NC_015945.1 232462 233256 R PFAM: Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; InterPro IPR014284:IPR007627; KEGG: zpr:ZPR_4420 RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; sigma-70 family RNA polymerase sigma factor complement(232462..233256) Muricauda ruestringensis DSM 13258 11053034 YP_004786706.1 CDS Murru_0228 NC_015945.1 233452 233841 D PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: zpr:ZPR_1314 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; helix-turn-helix domain-containing protein 233452..233841 Muricauda ruestringensis DSM 13258 11053035 YP_004786707.1 CDS Murru_0229 NC_015945.1 234069 235301 D KEGG: cbk:CLL_A1928 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 234069..235301 Muricauda ruestringensis DSM 13258 11053036 YP_004786708.1 CDS Murru_0230 NC_015945.1 235479 236501 R KEGG: gfo:GFO_1355 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(235479..236501) Muricauda ruestringensis DSM 13258 11053037 YP_004786709.1 CDS Murru_0231 NC_015945.1 236507 237091 R KEGG: zpr:ZPR_4414 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(236507..237091) Muricauda ruestringensis DSM 13258 11053038 YP_004786710.1 CDS Murru_0232 NC_015945.1 237355 238593 R PFAM: Phage integrase family; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: zpr:ZPR_1513 putative transposase; PFAM: Integrase, catalytic core, phage; SPTR: Putative transposase; integrase family protein complement(237355..238593) Muricauda ruestringensis DSM 13258 11053039 YP_004786711.1 CDS Murru_0233 NC_015945.1 239061 240179 D PFAM: Glucose / Sorbosone dehydrogenase; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR012938; KEGG: fbc:FB2170_09801 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 239061..240179 Muricauda ruestringensis DSM 13258 11053041 YP_004786712.1 CDS Murru_0234 NC_015945.1 240192 241007 R PFAM: SIS domain; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase; COGs: COG2103 sugar phosphate isomerase; HAMAP: N-acetylmuramic acid 6-phosphate etherase; InterPro IPR005488:IPR001347; KEGG: fbc:FB2170_09791 hypothetical protein; PFAM: Sugar isomerase (SIS); SPTR: Putative uncharacterized protein; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase; N-acetylmuramic acid 6-phosphate etherase complement(240192..241007) Muricauda ruestringensis DSM 13258 11053042 YP_004786713.1 CDS Murru_0235 NC_015945.1 241012 241761 R PFAM: Bacterial regulatory proteins, deoR family; DeoR-like helix-turn-helix domain; COGs: COG1349 Transcriptional regulators of sugar metabolism; InterPro IPR001034:IPR014036; KEGG: fbc:FB2170_09786 DeoR family transcriptional regulator; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal; SPTR: Transcriptional regulator, DeoR family protein; DeoR family transcriptional regulator complement(241012..241761) Muricauda ruestringensis DSM 13258 11053043 YP_004786714.1 CDS Murru_0236 NC_015945.1 241934 243871 D PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; GlcNAc-PI de-N-acetylase; TIGRFAM: glucosamine-6-phosphate isomerase; COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; InterPro IPR004547:IPR006148:IPR003737; KEGG: rbi:RB2501_01555 glucosamine-6-phosphate deaminase-like protein; PFAM: Glucosamine/galactosamine-6-phosphate isomerase; N-acetylglucosaminyl phosphatidylinositol deacetylase; PRIAM: Glucosamine-6-phosphate deaminase; SPTR: Glucosamine-6-phosphate deaminase; TIGRFAM: Glucosamine-6-phosphate isomerase; glucosamine-6-phosphate isomerase 241934..243871 Muricauda ruestringensis DSM 13258 11053044 YP_004786715.1 CDS Murru_0237 NC_015945.1 244083 245363 D PFAM: Major Facilitator Superfamily; KEGG: rbi:RB2501_01560 putative transmembrane permease; SPTR: Putative transmembrane permease; putative transmembrane permease 244083..245363 Muricauda ruestringensis DSM 13258 11053045 YP_004786716.1 CDS Murru_0238 NC_015945.1 245356 246942 D PFAM: Glycosyl hydrolase family 3 N terminal domain; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764; KEGG: fbc:FB2170_09766 glycosyl hydrolase, family 3; PFAM: Glycoside hydrolase, family 3, N-terminal; PRIAM: Beta-N-acetylhexosaminidase; SPTR: Glycosyl hydrolase, family 3; beta-N-acetylhexosaminidase 245356..246942 Muricauda ruestringensis DSM 13258 11053046 YP_004786717.1 CDS Murru_0239 NC_015945.1 246939 247604 D PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: cyj:Cyan7822_5970 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase domain family; type 11 methyltransferase 246939..247604 Muricauda ruestringensis DSM 13258 11053047 YP_004786718.1 CDS Murru_0240 NC_015945.1 247601 248689 D PFAM: Uncharacterised protein family (UPF0075); COGs: COG2377 molecular chaperone distantly related to HSP70-fold metalloprotease; InterPro IPR005338; KEGG: fbc:FB2170_09751 hypothetical protein; PFAM: Anhydro-N-acetylmuramic acid kinase; SPTR: Putative uncharacterized protein; hypothetical protein 247601..248689 Muricauda ruestringensis DSM 13258 11053048 YP_004786719.1 CDS Murru_0241 NC_015945.1 248686 249900 R PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; Multidrug resistance protein; COGs: COG2814 Arabinose efflux permease; InterPro IPR004812:IPR011701; KEGG: fbc:FB2170_09721 bicyclomycin resistance protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Bicyclomycin resistance protein; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; Bcr/CflA subfamily drug resistance transporter complement(248686..249900) Muricauda ruestringensis DSM 13258 11053049 YP_004786720.1 CDS Murru_0242 NC_015945.1 250076 251137 D PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: fbc:FB2170_06050 putative myo-inositol 2-dehydrogenase; PFAM: Oxidoreductase, N-terminal; SPTR: Probable Myo-inositol 2-dehydrogenase; oxidoreductase domain-containing protein 250076..251137 Muricauda ruestringensis DSM 13258 11053050 YP_004786721.1 CDS Murru_0243 NC_015945.1 251450 252991 R PFAM: Carboxyl transferase domain; COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR000022; KEGG: fbc:FB2170_09716 putative propionyl-CoA carboxylase beta chain protein; PFAM: Carboxyl transferase; PRIAM: Propionyl-CoA carboxylase; SPTR: Putative propionyl-CoA carboxylase beta chain protein; propionyl-CoA carboxylase complement(251450..252991) Muricauda ruestringensis DSM 13258 11053051 YP_004786722.1 CDS Murru_0244 NC_015945.1 252997 254439 R PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR005482:IPR005481:IPR005479; KEGG: fbc:FB2170_09711 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; PRIAM: Pyruvate carboxylase; SMART: Biotin carboxylase, C-terminal; SPTR: Acetyl-CoA carboxylase, biotin carboxylase; pyruvate carboxylase complement(252997..254439) Muricauda ruestringensis DSM 13258 11053052 YP_004786723.1 CDS Murru_0245 NC_015945.1 254446 254946 R PFAM: Biotin-requiring enzyme; COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR000089; KEGG: fbc:FB2170_09706 pyruvate carboxylase; PFAM: Biotin/lipoyl attachment; SPTR: Biotin carboxyl carrier protein of acyl-CoA carboxylase; biotin/lipoyl attachment domain-containing protein complement(254446..254946) Muricauda ruestringensis DSM 13258 11053053 YP_004786724.1 CDS Murru_0246 NC_015945.1 255183 255791 D PFAM: Phosphoribulokinase / Uridine kinase family; TIGRFAM: uridine kinase; COGs: COG0572 Uridine kinase; InterPro IPR000764:IPR006083; KEGG: fbc:FB2170_09646 uridine kinase; PFAM: Phosphoribulokinase/uridine kinase; PRIAM: Uridine kinase; SPTR: Uridine kinase; TIGRFAM: Uridine kinase; uridine kinase 255183..255791 Muricauda ruestringensis DSM 13258 11053054 YP_004786725.1 CDS Murru_0247 NC_015945.1 255793 256125 D PFAM: Septum formation initiator; InterPro IPR007060; KEGG: fbc:FB2170_09641 uridine kinase; PFAM: Septum formation initiator; SPTR: Uridine kinase; septum formation initiator 255793..256125 Muricauda ruestringensis DSM 13258 11053055 YP_004786726.1 CDS Murru_0248 NC_015945.1 256118 257503 D PFAM: Methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006099; KEGG: fps:FP1121 methylmalonyl-CoA mutase small subunit; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; PRIAM: Methylmalonyl-CoA mutase; SPTR: Putative methylmalonyl-CoA mutase small subunit; methylmalonyl-CoA mutase 256118..257503 Muricauda ruestringensis DSM 13258 11053056 YP_004786727.1 CDS Murru_0249 NC_015945.1 257496 259604 D PFAM: Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase C-terminal domain; COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006098:IPR006159:IPR006099:IPR006158; KEGG: gfo:GFO_0809 methylmalonyl-CoA mutase; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Cobalamin (vitamin B12)-binding; PRIAM: Methylmalonyl-CoA mutase; SPTR: Methylmalonyl-CoA mutase large subunit; TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; Methylmalonyl-CoA mutase, C-terminal; methylmalonyl-CoA mutase large subunit 257496..259604 Muricauda ruestringensis DSM 13258 11053057 YP_004786728.1 CDS Murru_0250 NC_015945.1 259739 260512 D PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: fbc:FB2170_09631 SpoOJ regulator protein; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: SpoOJ regulator protein; Cobyrinic acid ac-diamide synthase 259739..260512 Muricauda ruestringensis DSM 13258 11053058 YP_004786729.1 CDS Murru_0251 NC_015945.1 260513 261418 D PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115:IPR004437; KEGG: fbc:FB2170_09626 putative chromosome partitioning protein ParB; PFAM: ParB-like nuclease; SMART: ParB-like nuclease; SPTR: Putative chromosome partitioning protein parB; TIGRFAM: ParB-like partition protein; parB-like partition protein 260513..261418 Muricauda ruestringensis DSM 13258 11053059 YP_004786730.1 CDS Murru_0252 NC_015945.1 261432 262067 D KEGG: rbi:RB2501_01620 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 261432..262067 Muricauda ruestringensis DSM 13258 11053060 YP_004786731.1 CDS Murru_0253 NC_015945.1 262071 262772 D PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; COGs: COG0289 Dihydrodipicolinate reductase; HAMAP: Dihydrodipicolinate reductase, bacterial/plant; InterPro IPR011770:IPR000846:IPR022663; KEGG: fbc:FB2170_09616 dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase, C-terminal; Dihydrodipicolinate reductase, N-terminal; PRIAM: Dihydrodipicolinate reductase; SPTR: Dihydrodipicolinate reductase; TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; dihydrodipicolinate reductase 262071..262772 Muricauda ruestringensis DSM 13258 11053061 YP_004786732.1 CDS Murru_0254 NC_015945.1 262823 264562 D PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; InterPro IPR000223:IPR019759; KEGG: fbc:FB2170_09611 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; signal peptidase I 262823..264562 Muricauda ruestringensis DSM 13258 11053062 YP_004786733.1 CDS Murru_0255 NC_015945.1 264585 265217 D PFAM: WbqC-like protein family; InterPro IPR014985; KEGG: fbc:FB2170_09606 hypothetical protein; PFAM: WbqC-like protein family; SPTR: Putative uncharacterized protein; WbqC-like family protein 264585..265217 Muricauda ruestringensis DSM 13258 11053063 YP_004786734.1 CDS Murru_0256 NC_015945.1 265210 265518 D KEGG: fbc:FB2170_09601 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 265210..265518 Muricauda ruestringensis DSM 13258 11053064 YP_004786735.1 CDS Murru_0257 NC_015945.1 265507 266544 R PFAM: Endonuclease/Exonuclease/phosphatase family; COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: fbc:FB2170_09596 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Putative uncharacterized protein; endonuclease/exonuclease/phosphatase complement(265507..266544) Muricauda ruestringensis DSM 13258 11053065 YP_004786736.1 CDS Murru_0258 NC_015945.1 266551 267411 R PFAM: Rhomboid family; COGs: COG0705 membrane protein; InterPro IPR022764; KEGG: fbc:FB2170_09591 putative transmembrane rhomboid family protein; PFAM: Peptidase S54, rhomboid domain; SPTR: Putative transmembrane rhomboid family protein; peptidase S54, rhomboid domain-containing protein complement(266551..267411) Muricauda ruestringensis DSM 13258 11053066 YP_004786737.1 CDS Murru_0259 NC_015945.1 267415 268149 R PFAM: Rhomboid family; COGs: COG0705 membrane protein; InterPro IPR022764; KEGG: fbc:FB2170_09586 putative transmembrane rhomboid family protein; PFAM: Peptidase S54, rhomboid domain; SPTR: Putative transmembrane rhomboid family protein; peptidase S54, rhomboid domain-containing protein complement(267415..268149) Muricauda ruestringensis DSM 13258 11053067 YP_004786738.1 CDS Murru_0260 NC_015945.1 268150 269997 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL; COGs: COG0323 DNA mismatch repair enzyme (predicted ATPase); HAMAP: DNA mismatch repair protein, MutL; InterProIPR014790:IPR014763:IPR020667:IPR003594:IPR 013507; KEGG: fbc:FB2170_09581 putative DNA mismatch repair protein; PFAM: DNA mismatch repair protein, C-terminal; ATPase-like, ATP-binding domain; MutL, C-terminal, dimerisation; SMART: MutL, C-terminal, dimerisation; SPTR: DNA mismatch repair protein mutL; TIGRFAM: DNA mismatch repair protein, N-terminal; DNA mismatch repair protein mutL complement(268150..269997) Muricauda ruestringensis DSM 13258 11053068 YP_004786739.1 CDS Murru_0261 NC_015945.1 269997 270281 R KEGG: rbi:RB2501_01665 riboflavin synthase subunit beta; SPTR: Riboflavin synthase subunit beta; riboflavin synthase subunit beta complement(269997..270281) Muricauda ruestringensis DSM 13258 11053069 YP_004786740.1 CDS Murru_0262 NC_015945.1 270480 270962 R PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; COGs: COG0054 Riboflavin synthase beta-chain; HAMAP: 6,7-dimethyl-8-ribityllumazine synthase; InterPro IPR002180; KEGG: fbc:FB2170_09571 riboflavin synthase subunit beta; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; SPTR: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; 6,7-dimethyl-8-ribityllumazine synthase complement(270480..270962) Muricauda ruestringensis DSM 13258 11053070 YP_004786741.1 CDS Murru_0263 NC_015945.1 270966 271727 R PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440; KEGG: fbc:FB2170_09566 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: Putative uncharacterized protein; hypothetical protein complement(270966..271727) Muricauda ruestringensis DSM 13258 11053071 YP_004786742.1 CDS Murru_0264 NC_015945.1 271855 272934 D PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: recF protein; COGs: COG1195 Recombinational DNA repair ATPase (RecF pathway); HAMAP: DNA-binding, RecF; InterPro IPR001238:IPR003395; KEGG: fbc:FB2170_09561 DNA replication and repair protein RecF; PFAM: RecF/RecN/SMC; SPTR: DNA replication and repair protein recF; TIGRFAM: DNA-binding, RecF; DNA replication and repair protein RecF 271855..272934 Muricauda ruestringensis DSM 13258 11053072 YP_004786743.1 CDS Murru_0265 NC_015945.1 272939 273361 D KEGG: fbc:FB2170_09556 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 272939..273361 Muricauda ruestringensis DSM 13258 11053073 YP_004786744.1 CDS Murru_0266 NC_015945.1 273361 273657 D PFAM: Protein of unknown function (DUF721); InterPro IPR007922; KEGG: fbc:FB2170_09551 hypothetical protein; PFAM: Protein of unknown function DUF721/UPF0232; SPTR: Putative uncharacterized protein; hypothetical protein 273361..273657 Muricauda ruestringensis DSM 13258 11053074 YP_004786745.1 CDS Murru_0267 NC_015945.1 273784 274203 R PFAM: Nucleoside diphosphate kinase; COGs: COG0105 Nucleoside diphosphate kinase; HAMAP: Nucleoside diphosphate kinase; InterPro IPR001564; KEGG: fbc:FB2170_09546 nucleoside-diphosphate kinase; PFAM: Nucleoside diphosphate kinase; PRIAM: Nucleoside-diphosphate kinase; SMART: Nucleoside diphosphate kinase; SPTR: Nucleoside diphosphate kinase; manually curated; nucleoside diphosphate kinase complement(273784..274203) Muricauda ruestringensis DSM 13258 11053075 YP_004786746.1 CDS Murru_0268 NC_015945.1 274253 275287 R PFAM: PhoD-like phosphatase; COGs: COG3540 Phosphodiesterase/alkaline phosphatase D; KEGG: gfo:GFO_0789 phosphodiesterase/alkaline phosphatase D-like protein; SPTR: Phosphodiesterase/alkaline phosphatase D-like protein; phosphodiesterase/alkaline phosphatase D-like protein complement(274253..275287) Muricauda ruestringensis DSM 13258 11053076 YP_004786747.1 CDS Murru_0269 NC_015945.1 275362 276378 D PFAM: DHH family; DHHA1 domain; COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667:IPR003156; KEGG: fbc:FB2170_09541 hypothetical protein; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR: Putative uncharacterized protein; phosphoesterase RecJ domain-containing protein 275362..276378 Muricauda ruestringensis DSM 13258 11053077 YP_004786748.1 CDS Murru_0270 NC_015945.1 276375 276923 D PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; TIGRFAM: peptidyl-prolyl isomerase, gliding motility-associated; InterPro IPR019869:IPR001179; KEGG: fbc:FB2170_09536 putative peptidyl-prolylisomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Putative peptidyl-prolylisomerase; TIGRFAM: Gliding motility-associated, peptidyl-prolyl isomerase, GldI; peptidyl-prolyl isomerase, gliding motility-associated 276375..276923 Muricauda ruestringensis DSM 13258 11053078 YP_004786749.1 CDS Murru_0271 NC_015945.1 276935 278038 D PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130:IPR001179; KEGG: fbc:FB2170_09531 peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase 276935..278038 Muricauda ruestringensis DSM 13258 11053079 YP_004786750.1 CDS Murru_0272 NC_015945.1 278091 279215 D KEGG: fbc:FB2170_09516 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 278091..279215 Muricauda ruestringensis DSM 13258 11053080 YP_004786751.1 CDS Murru_0273 NC_015945.1 279275 282220 D PFAM: Amidohydrolase family; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: fbc:FB2170_09511 hypothetical protein; PFAM: Amidohydrolase 1; SPTR: Secreted enzyme; amidohydrolase 279275..282220 Muricauda ruestringensis DSM 13258 11053081 YP_004786752.1 CDS Murru_0274 NC_015945.1 282231 283529 D COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR013108; KEGG: fbc:FB2170_09506 putative amidohydrolase; PFAM: Amidohydrolase 3; SPTR: Predicted amidohydrolase; amidohydrolase 282231..283529 Muricauda ruestringensis DSM 13258 11053082 YP_004786753.1 CDS Murru_0275 NC_015945.1 283587 284384 R KEGG: rbi:RB2501_03395 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(283587..284384) Muricauda ruestringensis DSM 13258 11053083 YP_004786754.1 CDS Murru_0276 NC_015945.1 284434 285255 D PFAM: SpoU rRNA Methylase family; COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: cat:CA2559_08786 putative rRNA methylase; PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: 23S rRNA methyltransferase; tRNA/rRNA methyltransferase SpoU 284434..285255 Muricauda ruestringensis DSM 13258 11053084 YP_004786755.1 CDS Murru_0277 NC_015945.1 285259 286491 D PFAM: Peptidase family M48; COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: fbc:FB2170_09331 STE24 endopeptidase; PFAM: Peptidase M48; PRIAM: Ste24 endopeptidase; SPTR: Ste24 endopeptidase; Ste24 endopeptidase 285259..286491 Muricauda ruestringensis DSM 13258 11053085 YP_004786756.1 CDS Murru_0278 NC_015945.1 286536 288740 D PFAM: HD domain; Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family; COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterProIPR003607:IPR007685:IPR004811:IPR006674:IPR 004095; KEGG: rbi:RB2501_01775 GTP pyrophosphokinase; PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD subdomain; TGS; PRIAM: GTP diphosphokinase; SMART: RelA/SpoT; Metal-dependent phosphohydrolase, HD domain; SPTR: GTP pyrophosphokinase; TIGRFAM: RelA/SpoT protein; (p)ppGpp synthetase I SpoT/RelA 286536..288740 Muricauda ruestringensis DSM 13258 11053086 YP_004786757.1 CDS Murru_0279 NC_015945.1 288782 289237 D PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: fbc:FB2170_09321 ferric uptake regulation protein; PFAM: Ferric-uptake regulator; SPTR: Ferric uptake regulation protein; Fur family ferric uptake regulator 288782..289237 Muricauda ruestringensis DSM 13258 11053087 YP_004786758.1 CDS Murru_0280 NC_015945.1 289250 290518 D PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase; COGs: COG0104 Adenylosuccinate synthase; HAMAP: Adenylosuccinate synthetase; InterPro IPR001114; KEGG: fbc:FB2170_09316 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; PRIAM: Adenylosuccinate synthase; SMART: Adenylosuccinate synthetase; SPTR: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; adenylosuccinate synthetase 289250..290518 Muricauda ruestringensis DSM 13258 11053088 YP_004786759.1 CDS Murru_0281 NC_015945.1 290628 291107 D PFAM: Ferritin-like domain; COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR008331; KEGG: chu:CHU_2021 DNA-binding protein; DPS family protein; PFAM: Ferritin/Dps protein; SPTR: DNA-binding protein; DPS family protein; ferritin Dps family protein 290628..291107 Muricauda ruestringensis DSM 13258 11053089 YP_004786760.1 CDS Murru_0282 NC_015945.1 291286 292989 D KEGG: fbc:FB2170_09271 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 291286..292989 Muricauda ruestringensis DSM 13258 11053090 YP_004786761.1 CDS Murru_0283 NC_015945.1 292989 294185 D PFAM: Aminotransferase class-III; COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR005814; KEGG: fbc:FB2170_09266 acetylornithine aminotransferase; PFAM: Aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: Acetylornithine aminotransferase; acetylornithine transaminase 292989..294185 Muricauda ruestringensis DSM 13258 11053091 YP_004786762.1 CDS Murru_0284 NC_015945.1 294272 295672 D PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440; KEGG: fbc:FB2170_09261 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: TPR repeat protein; hypothetical protein 294272..295672 Muricauda ruestringensis DSM 13258 11053092 YP_004786763.1 CDS Murru_0285 NC_015945.1 295694 296611 D PFAM: Domain of unknown function (DUF368); COGs: COG2035 membrane protein; InterPro IPR007163; KEGG: fbc:FB2170_09256 hypothetical protein; PFAM: Protein of unknown function DUF368; SPTR: Putative uncharacterized protein; hypothetical protein 295694..296611 Muricauda ruestringensis DSM 13258 11053093 YP_004786764.1 CDS Murru_0286 NC_015945.1 296631 297668 D PFAM: Domain of unknown function (DUF368); COGs: COG2035 membrane protein; InterPro IPR007163; KEGG: fbc:FB2170_09251 hypothetical protein; PFAM: Protein of unknown function DUF368; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 296631..297668 Muricauda ruestringensis DSM 13258 11053094 YP_004786765.1 CDS Murru_0287 NC_015945.1 297643 298374 D PFAM: Shikimate dehydrogenase substrate binding domain; TIGRFAM: shikimate 5-dehydrogenase; COGs: COG0169 Shikimate 5-dehydrogenase; InterPro IPR013708:IPR006151; KEGG: fbc:FB2170_09246 putative shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; SPTR: Putative shikimate 5-dehydrogenase; shikimate dehydrogenase 297643..298374 Muricauda ruestringensis DSM 13258 11053095 YP_004786766.1 CDS Murru_0288 NC_015945.1 298517 300604 D PFAM: Domain of Unknown Function (DUF349); InterPro IPR007139; KEGG: fbc:FB2170_09241 hypothetical protein; PFAM: Protein of unknown function DUF349; SPTR: Putative uncharacterized protein; hypothetical protein 298517..300604 Muricauda ruestringensis DSM 13258 11053096 YP_004786767.1 CDS Murru_0289 NC_015945.1 300681 301100 R PFAM: CBS domain; COGs: COG2524 transcriptional regulator protein; InterPro IPR000644; KEGG: fbc:FB2170_09236 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: Putative uncharacterized protein; putative signal transduction protein complement(300681..301100) Muricauda ruestringensis DSM 13258 11053097 YP_004786768.1 CDS Murru_0290 NC_015945.1 301174 302745 R PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG; COGs: COG1418 HD superfamily hydrolase; HAMAP: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; InterProIPR004087:IPR003607:IPR017705:IPR006675:IPR 018111:IPR006674; KEGG: fbc:FB2170_09191 hypothetical protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; K Homology, type 1, subgroup; SMART: Metal-dependent phosphohydrolase, HD domain; K Homology; SPTR: Putative uncharacterized protein; TIGRFAM: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; Uncharacterised protein family HDIG; 2,3 cyclic-nucleotide 2-phosphodiesterase complement(301174..302745) Muricauda ruestringensis DSM 13258 11053098 YP_004786769.1 CDS Murru_0291 NC_015945.1 302962 303255 R PFAM: Cell division protein ZapA; KEGG: fbc:FB2170_09186 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(302962..303255) Muricauda ruestringensis DSM 13258 11053100 YP_004786770.1 CDS Murru_0292 NC_015945.1 303270 303563 R KEGG: fbc:FB2170_09181 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(303270..303563) Muricauda ruestringensis DSM 13258 11053101 YP_004786771.1 CDS Murru_0293 NC_015945.1 303733 305424 D PFAM: Peptidase family M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: fbc:FB2170_09176 putative peptidase; PFAM: Peptidase M23; SPTR: Putative peptidase; peptidase M23 303733..305424 Muricauda ruestringensis DSM 13258 11053102 YP_004786772.1 CDS Murru_0294 NC_015945.1 305637 306284 D KEGG: fbc:FB2170_09166 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 305637..306284 Muricauda ruestringensis DSM 13258 11053103 YP_004786773.1 CDS Murru_0295 NC_015945.1 306287 307435 R PFAM: Aminotransferase class-V; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: fbc:FB2170_09161 putative cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Putative cysteine desulfurase; cysteine desulfurase complement(306287..307435) Muricauda ruestringensis DSM 13258 11053104 YP_004786774.1 CDS Murru_0296 NC_015945.1 307546 308067 D KEGG: fbc:FB2170_09156 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 307546..308067 Muricauda ruestringensis DSM 13258 11053105 YP_004786775.1 CDS Murru_0297 NC_015945.1 308064 308606 R PFAM: Smr domain; InterPro IPR002625; KEGG: fbc:FB2170_09151 hypothetical protein; PFAM: Smr protein/MutS2 C-terminal; SPTR: Putative uncharacterized protein; Smr protein/MutS2 complement(308064..308606) Muricauda ruestringensis DSM 13258 11053106 YP_004786776.1 CDS Murru_0298 NC_015945.1 308618 308998 D PFAM: Protein of unknown function (DUF2752); KEGG: fbc:FB2170_09146 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 308618..308998 Muricauda ruestringensis DSM 13258 11053107 YP_004786777.1 CDS Murru_0299 NC_015945.1 309011 309334 D KEGG: fbc:FB2170_09141 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 309011..309334 Muricauda ruestringensis DSM 13258 11053108 YP_004786778.1 CDS Murru_0300 NC_015945.1 309345 309656 D PFAM: Interferon-induced transmembrane protein; KEGG: fbc:FB2170_09136 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 309345..309656 Muricauda ruestringensis DSM 13258 11053109 YP_004786779.1 CDS Murru_0301 NC_015945.1 309653 311854 R PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; COGs: COG0514 Superfamily II DNA helicase; InterProIPR014001:IPR001650:IPR018982:IPR002121:IPR 004589:IPR011545; KEGG: fbc:FB2170_00545 ATP-dependent DNA helicase RecQ; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; RQC domain; Helicase/RNase D C-terminal, HRDC domain; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; RQC domain; Helicase/RNase D C-terminal, HRDC domain; SPTR: ATP-dependent DNA helicase recQ; TIGRFAM: DNA helicase, ATP-dependent, RecQ type; RecQ familyATP-dependent DNA helicase complement(309653..311854) Muricauda ruestringensis DSM 13258 11053110 YP_004786780.1 CDS Murru_0302 NC_015945.1 312040 313005 D PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR004800:IPR001347:IPR000644; KEGG: fbc:FB2170_00550 hypothetical protein; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core; PRIAM: Arabinose-5-phosphate isomerase; SPTR: Putative uncharacterized protein; TIGRFAM: KpsF/GutQ; KpsF/GutQ family protein 312040..313005 Muricauda ruestringensis DSM 13258 11053111 YP_004786781.1 CDS Murru_0303 NC_015945.1 313005 313844 D PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC; COGs: COG0805 Sec-independent protein secretion pathway component TatC; InterPro IPR019822:IPR002033; KEGG: fbc:FB2170_00555 sec-independent protein translocase TatC; PFAM: Sec-independent periplasmic protein translocase; SPTR: Sec-independent protein translocase TatC; TIGRFAM: Twin arginine-targeting protein translocase, TatC; Sec-independent protein translocase subunit TatC 313005..313844 Muricauda ruestringensis DSM 13258 11053112 YP_004786782.1 CDS Murru_0304 NC_015945.1 313837 314187 D PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain; COGs: COG0599 gamma-carboxymuconolactone decarboxylase subunit; InterPro IPR004675:IPR003779; KEGG: gfo:GFO_0589 carboxymuconolactone decarboxylase family protein; PFAM: Carboxymuconolactone decarboxylase; SPTR: Alkylhydroperoxidase like protein, AhpD family; TIGRFAM: Alkylhydroperoxidase AhpD core; alkylhydroperoxidase 313837..314187 Muricauda ruestringensis DSM 13258 11053113 YP_004786783.1 CDS Murru_0305 NC_015945.1 314245 314985 D PFAM: ABC transporter; COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_00560 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; manually curated; sulfate-transporting ATPase 314245..314985 Muricauda ruestringensis DSM 13258 11053114 YP_004786784.1 CDS Murru_0306 NC_015945.1 314988 315713 R PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; COGs: COG1183 Phosphatidylserine synthase; InterPro IPR000462; KEGG: fbc:FB2170_00565 putative phosphatidylserine synthase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: Putative phosphatidylserine synthase; CDP-alcohol phosphatidyltransferase complement(314988..315713) Muricauda ruestringensis DSM 13258 11053115 YP_004786785.1 CDS Murru_0307 NC_015945.1 315765 316985 D KEGG: fbc:FB2170_00570 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 315765..316985 Muricauda ruestringensis DSM 13258 11053116 YP_004786786.1 CDS Murru_0308 NC_015945.1 317007 318878 D PFAM: ABC transporter; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_00575 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; ABC transporter-like protein 317007..318878 Muricauda ruestringensis DSM 13258 11053117 YP_004786787.1 CDS Murru_0309 NC_015945.1 318880 319377 D KEGG: fbc:FB2170_00580 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 318880..319377 Muricauda ruestringensis DSM 13258 11053118 YP_004786788.1 CDS Murru_0310 NC_015945.1 319395 319556 D hypothetical protein 319395..319556 Muricauda ruestringensis DSM 13258 11053119 YP_004786789.1 CDS Murru_0311 NC_015945.1 319611 320171 D PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase; COGs: COG2096 conserved hypothetical protein; InterPro IPR017858:IPR002779; KEGG: fbc:FB2170_00590 putative vitamin B12 related cobalamin adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT/PduO type; PRIAM: Cob(I)yrinic acid a,c-diamide adenosyltransferase; SPTR: Putative vitamin B12 related Cobalamin adenosyltransferase; TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal; ATP/cobalamin adenosyltransferase 319611..320171 Muricauda ruestringensis DSM 13258 11053120 YP_004786790.1 CDS Murru_0312 NC_015945.1 320294 320518 D PFAM: Protein of unknown function (DUF2795); KEGG: fbc:FB2170_00595 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 320294..320518 Muricauda ruestringensis DSM 13258 11053121 YP_004786791.1 CDS Murru_0313 NC_015945.1 320653 324015 D PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit; COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); HAMAP: SecA protein; InterPro IPR011115:IPR011130:IPR000185:IPR011116; KEGG: fbc:FB2170_00600 translocase; PFAM: SecA DEAD-like, N-terminal; SecA preprotein, cross-linking domain; SecA Wing/Scaffold; SMART: SecA DEAD-like, N-terminal; SecA preprotein, cross-linking domain; SPTR: Protein translocase subunit secA; TIGRFAM: SecA protein; protein translocase subunit secA 320653..324015 Muricauda ruestringensis DSM 13258 11053122 YP_004786792.1 CDS Murru_0314 NC_015945.1 324175 325392 D PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG3920 Signal transduction histidine kinase; InterPro IPR003594:IPR011495; KEGG: fbc:FB2170_00610 signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Signal transduction histidine kinase; signal transduction histidine kinase 324175..325392 Muricauda ruestringensis DSM 13258 11053123 YP_004786793.1 CDS Murru_0315 NC_015945.1 325457 325561 R hypothetical protein complement(325457..325561) Muricauda ruestringensis DSM 13258 11053124 YP_004786794.1 CDS Murru_0316 NC_015945.1 325564 325860 R KEGG: fbc:FB2170_11316 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(325564..325860) Muricauda ruestringensis DSM 13258 11053125 YP_004786795.1 CDS Murru_0317 NC_015945.1 326124 326819 D PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; COGs: COG0225 Peptide methionine sulfoxide reductase; HAMAP: Peptide methionine sulphoxide reductase MsrA; InterPro IPR002569; KEGG: rbi:RB2501_11597 peptide methionine sulfoxide reductase; PFAM: Peptide methionine sulphoxide reductase MsrA; PRIAM: Peptide-methionine (S)-S-oxide reductase; SPTR: Peptide methionine sulfoxide reductase msrA 2; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; peptide methionine sulfoxide reductase MsrA 326124..326819 Muricauda ruestringensis DSM 13258 11053126 YP_004786796.1 CDS Murru_0318 NC_015945.1 326905 328365 R KEGG: fbc:FB2170_00685 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(326905..328365) Muricauda ruestringensis DSM 13258 11053127 YP_004786797.1 CDS Murru_0319 NC_015945.1 328337 328939 R KEGG: fbc:FB2170_00690 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(328337..328939) Muricauda ruestringensis DSM 13258 11053128 YP_004786798.1 CDS Murru_0320 NC_015945.1 328929 329465 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: fbc:FB2170_00695 RNA polymerase sigma-E factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(328929..329465) Muricauda ruestringensis DSM 13258 11053129 YP_004786799.1 CDS Murru_0321 NC_015945.1 329714 330139 R PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, Ohr subfamily; COGs: COG1764 redox protein regulator of disulfide bond formation; InterPro IPR019953:IPR003718; KEGG: cat:CA2559_09146 organic hydroperoxide resistance protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: Organic hydroperoxide resistance protein; TIGRFAM: Peroxiredoxin, organic hydroperoxide resistance-related; Ohr subfamily peroxiredoxin complement(329714..330139) Muricauda ruestringensis DSM 13258 11053130 YP_004786800.1 CDS Murru_0322 NC_015945.1 330351 331394 D PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase; COGs: COG1703 Putative periplasmic protein kinase ArgK and related GTPase of G3E family; InterPro IPR005129; KEGG: zpr:ZPR_1074 protein kinase ArgK; PFAM: ArgK protein; SPTR: Protein kinase ArgK; TIGRFAM: ArgK protein; LAO/AO transport system ATPase 330351..331394 Muricauda ruestringensis DSM 13258 11053131 YP_004786801.1 CDS Murru_0323 NC_015945.1 331594 332556 D PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fbc:FB2170_00710 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase; family 2 glycosyl transferase 331594..332556 Muricauda ruestringensis DSM 13258 11053132 YP_004786802.1 CDS Murru_0324 NC_015945.1 332537 333409 D PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; InterPro IPR022791; KEGG: rbi:RB2501_11557 hypothetical protein; PFAM: Lysylphosphatidylglycerol synthetase/UPF0104; SPTR: Putative uncharacterized protein; lysylphosphatidylglycerol synthetase 332537..333409 Muricauda ruestringensis DSM 13258 11053133 YP_004786803.1 CDS Murru_0325 NC_015945.1 333406 335064 R COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: fbc:FB2170_00720 dolichyl-phosphate-mannose-protein mannosyltransferase family protein; PFAM: Glycosyl transferase, family 39; SPTR: Dolichyl-phosphate-mannose-protein mannosyltransferase-family protein; glycosyl transferase family protein complement(333406..335064) Muricauda ruestringensis DSM 13258 11053134 YP_004786804.1 CDS Murru_0326 NC_015945.1 335061 335630 R PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: fbc:FB2170_00725 hypothetical protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: Putative uncharacterized protein; phosphoesterase PA-phosphatase-like protein complement(335061..335630) Muricauda ruestringensis DSM 13258 11053135 YP_004786805.1 CDS Murru_0327 NC_015945.1 335630 335857 R KEGG: fbc:FB2170_00730 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(335630..335857) Muricauda ruestringensis DSM 13258 11053136 YP_004786806.1 CDS Murru_0328 NC_015945.1 336224 337591 R PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: fbc:FB2170_00735 putative transport protein, multidrug efflux protein; PFAM: Multi antimicrobial extrusion protein; SPTR: Putative transport protein, multidrug efflux protein; TIGRFAM: Multi antimicrobial extrusion protein; MATE efflux family protein complement(336224..337591) Muricauda ruestringensis DSM 13258 11053137 YP_004786807.1 CDS Murru_0329 NC_015945.1 337674 338447 R PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein; COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR011551:IPR004518; KEGG: fbc:FB2170_00740 MazG family protein; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core; SPTR: MazG family protein; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial; MazG family protein complement(337674..338447) Muricauda ruestringensis DSM 13258 11053138 YP_004786808.1 CDS Murru_0330 NC_015945.1 338734 339378 D PFAM: GDSL-like Lipase/Acylhydrolase; InterPro IPR001087; KEGG: fbc:FB2170_00800 hypothetical protein; PFAM: Lipase, GDSL; SPTR: Putative secreted protein; G-D-S-L family lipolytic protein 338734..339378 Muricauda ruestringensis DSM 13258 11053139 YP_004786809.1 CDS Murru_0331 NC_015945.1 339391 340968 D PFAM: Glycosyl hydrolase family 20, catalytic domain; Glycosyl hydrolase family 20, domain 2; COGs: COG3525 N-acetyl-beta-hexosaminidase; InterPro IPR015882:IPR015883; KEGG: fbc:FB2170_00805 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Acetylhexosaminidase, subunit a/b; PRIAM: Beta-N-acetylhexosaminidase; SPTR: Beta-N-acetylhexosaminidase; beta-N-acetylhexosaminidase 339391..340968 Muricauda ruestringensis DSM 13258 11053140 YP_004786810.1 CDS Murru_0332 NC_015945.1 340972 341415 R KEGG: fbc:FB2170_00815 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(340972..341415) Muricauda ruestringensis DSM 13258 11053141 YP_004786811.1 CDS Murru_0333 NC_015945.1 341471 342061 R PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; COGs: COG0242 N-formylmethionyl-tRNA deformylase; HAMAP: Formylmethionine deformylase; InterPro IPR000181; KEGG: cat:CA2559_06160 peptide deformylase; PFAM: Formylmethionine deformylase; PRIAM: Peptide deformylase; SPTR: Peptide deformylase; TIGRFAM: Formylmethionine deformylase; peptide deformylase complement(341471..342061) Muricauda ruestringensis DSM 13258 11053142 YP_004786812.1 CDS Murru_0334 NC_015945.1 342066 342476 R PFAM: Uncharacterised protein family (UPF0081); TIGRFAM: RNAse H-fold protein YqgF; COGs: COG0816 endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); HAMAP: Resolvase, holliday junction-type, YqgF-like; InterPro IPR006641:IPR005227; KEGG: fbc:FB2170_00825 Holliday junction resolvase-like protein; PFAM: Resolvase, holliday junction-type, YqgF-like; SMART: Resolvase, RNase H-like fold; SPTR: Putative Holliday junction resolvase; TIGRFAM: Resolvase, holliday junction-type, YqgF-like; Holliday junction resolvase complement(342066..342476) Muricauda ruestringensis DSM 13258 11053143 YP_004786813.1 CDS Murru_0335 NC_015945.1 342544 343392 D TIGRFAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; COGs: COG2171 Tetrahydrodipicolinate N-succinyltransferase; InterPro IPR001451; KEGG: fbc:FB2170_00830 hypothetical protein; PRIAM: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; SPTR: Putative uncharacterized protein; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 342544..343392 Muricauda ruestringensis DSM 13258 11053144 YP_004786814.1 CDS Murru_0336 NC_015945.1 343393 344439 R KEGG: lrf:LAR_1288 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(343393..344439) Muricauda ruestringensis DSM 13258 11053145 YP_004786815.1 CDS Murru_0337 NC_015945.1 344534 345652 D PFAM: UDP-galactopyranose mutase; FAD binding domain; TIGRFAM: UDP-galactopyranose mutase; COGs: COG0562 UDP-galactopyranose mutase; InterPro IPR004379:IPR003953:IPR015899; KEGG: dfe:Dfer_3361 UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase, C-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; PRIAM: UDP-galactopyranose mutase; SPTR: UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase; UDP-galactopyranose mutase 344534..345652 Muricauda ruestringensis DSM 13258 11053146 YP_004786816.1 CDS Murru_0338 NC_015945.1 345843 346646 D PFAM: Glycosyl transferase family 2; InterPro IPR001173; KEGG: rbi:RB2501_11472 putative beta-1,4-glucosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Probable beta-1,4-glucosyltransferase; family 2 glycosyl transferase 345843..346646 Muricauda ruestringensis DSM 13258 11053147 YP_004786817.1 CDS Murru_0339 NC_015945.1 346628 347461 R PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: rbi:RB2501_11467 putative glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Putative glycosyltransferase; family 2 glycosyl transferase complement(346628..347461) Muricauda ruestringensis DSM 13258 11053148 YP_004786818.1 CDS Murru_0340 NC_015945.1 347528 348376 D PFAM: Glycosyl transferase family 64 domain; KEGG: rbi:RB2501_11462 Zn-dependent alcohol dehydrogenase, class III; SPTR: Putative uncharacterized protein; Zn-dependent alcohol dehydrogenase 347528..348376 Muricauda ruestringensis DSM 13258 11053149 YP_004786819.1 CDS Murru_0341 NC_015945.1 348348 348908 D PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; COGs: COG0009 Putative translation factor (SUA5); InterPro IPR004388:IPR006070; KEGG: fbc:FB2170_00860 hypothetical protein; PFAM: Sua5/YciO/YrdC, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; Sua5/YciO/YrdC/YwlC family protein 348348..348908 Muricauda ruestringensis DSM 13258 11053150 YP_004786820.1 CDS Murru_0342 NC_015945.1 348911 350341 D PFAM: HD domain; Poly A polymerase head domain; TIGRFAM: uncharacterized domain HDIG; COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR002646:IPR006674; KEGG: fbc:FB2170_00865 putative polyA polymerase; PFAM: Poly A polymerase, head domain; Metal-dependent phosphohydrolase, HD subdomain; PRIAM: tRNA cytidylyltransferase; SPTR: Putative polyA polymerase; polynucleotide adenylyltransferase/metal dependent phosphohydrolase 348911..350341 Muricauda ruestringensis DSM 13258 11053151 YP_004786821.1 CDS Murru_0343 NC_015945.1 350338 351351 D PFAM: Cytochrome oxidase assembly protein; COGs: COG1612 Uncharacterized protein required for cytochrome oxidase assembly; HAMAP: Heme A synthase/Protoheme IX farnesyltransferase; InterPro IPR003780; KEGG: fbc:FB2170_00870 cytochrome oxidase assembly; PFAM: Heme A synthase/Protoheme IX farnesyltransferase; SPTR: Heme A synthase; Heme A synthase 350338..351351 Muricauda ruestringensis DSM 13258 11053152 YP_004786822.1 CDS Murru_0344 NC_015945.1 351394 351897 D PFAM: Plasmid pRiA4b ORF-3-like protein; KEGG: fbc:FB2170_00875 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 351394..351897 Muricauda ruestringensis DSM 13258 11053153 YP_004786823.1 CDS Murru_0345 NC_015945.1 351943 353001 D KEGG: fbc:FB2170_00880 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 351943..353001 Muricauda ruestringensis DSM 13258 11053154 YP_004786824.1 CDS Murru_0346 NC_015945.1 352998 354074 R KEGG: fbc:FB2170_00885 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(352998..354074) Muricauda ruestringensis DSM 13258 11053155 YP_004786825.1 CDS Murru_0347 NC_015945.1 354153 355049 D PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_00890 hypothetical protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; ABC transporter-like protein 354153..355049 Muricauda ruestringensis DSM 13258 11053156 YP_004786826.1 CDS Murru_0348 NC_015945.1 355061 355894 D KEGG: fbc:FB2170_00895 excinuclease ABC subunit B; SPTR: Excinuclease ABC subunit B; excinuclease ABC subunit B 355061..355894 Muricauda ruestringensis DSM 13258 11053157 YP_004786827.1 CDS Murru_0349 NC_015945.1 355960 357948 D PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit; COGs: COG0556 Helicase subunit of the DNA excision repair complex; HAMAP: Excinuclease ABC, B subunit; InterProIPR014001:IPR001650:IPR004807:IPR006935:IPR 001943; KEGG: fbc:FB2170_00910 excinuclease ABC subunit B; PFAM: Helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: UvrABC system protein B; TIGRFAM: Excinuclease ABC, B subunit; UvrABC system protein B 355960..357948 Muricauda ruestringensis DSM 13258 11053158 YP_004786828.1 CDS Murru_0350 NC_015945.1 358039 358464 R PFAM: Hsp20/alpha crystallin family; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: fbc:FB2170_00915 putative heat-shock related protein; PFAM: Heat shock protein Hsp20; SPTR: Putative heat-shock related protein; heat shock protein Hsp20 complement(358039..358464) Muricauda ruestringensis DSM 13258 11053159 YP_004786829.1 CDS Murru_0351 NC_015945.1 358580 358981 R KEGG: rbi:RB2501_11392 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(358580..358981) Muricauda ruestringensis DSM 13258 11053160 YP_004786830.1 CDS Murru_0352 NC_015945.1 359097 359432 R KEGG: fbc:FB2170_00935 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(359097..359432) Muricauda ruestringensis DSM 13258 11053161 YP_004786831.1 CDS Murru_0353 NC_015945.1 359785 360978 R PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit; COGs: COG0045 Succinyl-CoA synthetase beta subunit; HAMAP: Succinyl-CoA synthetase, beta subunit; InterPro IPR005809:IPR013650:IPR005811; KEGG: fbc:FB2170_00940 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; PRIAM: Succinate--CoA ligase (ADP-forming); SPTR: Succinyl-CoA ligase [ADP-forming] subunit beta; TIGRFAM: Succinyl-CoA synthetase, beta subunit; succinyl-CoA ligase subunit beta complement(359785..360978) Muricauda ruestringensis DSM 13258 11053162 YP_004786832.1 CDS Murru_0354 NC_015945.1 361098 361736 R PFAM: ATP-dependent protease La (LON) domain; COGs: COG2802 Uncharacterized protein similar to the N-terminal domain of Lon protease; InterPro IPR003111; KEGG: fbc:FB2170_00945 ATP-dependent protease La domain-containing protein; PFAM: Peptidase S16, lon N-terminal; SMART: Peptidase S16, lon N-terminal; SPTR: ATP-dependent protease La domain protein; peptidase S16 lon domain-containing protein complement(361098..361736) Muricauda ruestringensis DSM 13258 11053163 YP_004786833.1 CDS Murru_0355 NC_015945.1 361898 363136 D PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR002986:IPR022644:IPR022643; KEGG: fbc:FB2170_00950 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal; Orn/DAP/Arg decarboxylase 2, C-terminal; PRIAM: Diaminopimelate decarboxylase; SPTR: Diaminopimelate decarboxylase; TIGRFAM: Diaminopimelate decarboxylase; diaminopimelate decarboxylase 361898..363136 Muricauda ruestringensis DSM 13258 11053164 YP_004786834.1 CDS Murru_0356 NC_015945.1 363236 363751 D PFAM: Protein of unknown function, DUF255; COGs: COG2143 Thioredoxin-related protein; InterPro IPR004879; KEGG: fbc:FB2170_00955 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 363236..363751 Muricauda ruestringensis DSM 13258 11053165 YP_004786835.1 CDS Murru_0357 NC_015945.1 363784 365256 R PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; COGs: COG0516 IMP dehydrogenase/GMP reductase; InterPro IPR000644:IPR005990:IPR001093; KEGG: zpr:ZPR_0865 IMP dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; PRIAM: IMP dehydrogenase; SMART: Cystathionine beta-synthase, core; SPTR: Inosine-5'-monophosphate dehydrogenase; TIGRFAM: IMP dehydrogenase; inosine-5'-monophosphate dehydrogenase complement(363784..365256) Muricauda ruestringensis DSM 13258 11053166 YP_004786836.1 CDS Murru_0358 NC_015945.1 365392 365760 D KEGG: fps:FP1497 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 365392..365760 Muricauda ruestringensis DSM 13258 11053167 YP_004786837.1 CDS Murru_0359 NC_015945.1 365935 366441 R KEGG: fbc:FB2170_00965 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(365935..366441) Muricauda ruestringensis DSM 13258 11053168 YP_004786838.1 CDS Murru_0360 NC_015945.1 366713 368935 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG4772 Outer membrane receptor for Fe3+-dicitrate; InterPro IPR012910:IPR000531; KEGG: rbi:RB2501_11352 putative TonB-dependent outer membrane protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Putative TonB-dependent outer membrane protein; TonB-dependent receptor 366713..368935 Muricauda ruestringensis DSM 13258 11053169 YP_004786839.1 CDS Murru_0361 NC_015945.1 369096 369959 R PFAM: HMGL-like; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891; KEGG: fbc:FB2170_00980 hydroxymethylglutaryl-CoA lyase like protein; PFAM: Pyruvate carboxyltransferase; PRIAM: Hydroxymethylglutaryl-CoA lyase; SPTR: Hydroxymethylglutaryl-CoA lyase like protein; manually curated; hydroxymethylglutaryl-CoA lyase complement(369096..369959) Muricauda ruestringensis DSM 13258 11053170 YP_004786840.1 CDS Murru_0362 NC_015945.1 369981 370637 R PFAM: LysE type translocator; COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: fbc:FB2170_00985 lysine exporter protein LysE/YggA; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Lysine exporter protein (LYSE/YGGA); lysine exporter protein LysE/YggA complement(369981..370637) Muricauda ruestringensis DSM 13258 11053171 YP_004786841.1 CDS Murru_0363 NC_015945.1 370644 371684 R PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase, subfamily 2; COGs: COG0167 Dihydroorotate dehydrogenase; HAMAP: Dihydroorotate dehydrogenase, class 2; InterPro IPR005719:IPR012135; KEGG: fbc:FB2170_00995 dihydroorotate dehydrogenase; PFAM: Dihydroorotate dehydrogenase, class 1/ 2; PRIAM: Dihydroorotate oxidase; SPTR: Dihydroorotate dehydrogenase; TIGRFAM: Dihydroorotate dehydrogenase, class 2; dihydroorotate dehydrogenase complement(370644..371684) Muricauda ruestringensis DSM 13258 11053172 YP_004786842.1 CDS Murru_0364 NC_015945.1 371741 372160 R KEGG: fbc:FB2170_01000 peptidase T; SPTR: Peptidase T; peptidase T complement(371741..372160) Muricauda ruestringensis DSM 13258 11053173 YP_004786843.1 CDS Murru_0365 NC_015945.1 372264 373493 D PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: peptidase T; COGs: COG2195 Di- and tripeptidase; HAMAP: Peptidase M20B, tripeptide aminopeptidase; InterPro IPR010161:IPR002933:IPR011650; KEGG: fbc:FB2170_01005 peptidase T; PFAM: Peptidase M20, dimerisation; Peptidase M20; PRIAM: Tripeptide aminopeptidase; SPTR: Peptidase T; TIGRFAM: Peptidase M20B, tripeptide aminopeptidase; peptidase T 372264..373493 Muricauda ruestringensis DSM 13258 11053174 YP_004786844.1 CDS Murru_0366 NC_015945.1 373463 374086 D PFAM: Domain of unknown function (DU1801); COGs: COG4430 conserved hypothetical protein; InterPro IPR014922; KEGG: rbi:RB2501_11317 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: Putative uncharacterized protein; hypothetical protein 373463..374086 Muricauda ruestringensis DSM 13258 11053175 YP_004786845.1 CDS Murru_0367 NC_015945.1 374246 374764 D SPTR: Putative uncharacterized protein; hypothetical protein 374246..374764 Muricauda ruestringensis DSM 13258 11053176 YP_004786846.1 CDS Murru_0369 NC_015945.1 375063 375434 D PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: lby:Lbys_3047 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Putative uncharacterized protein; bleomycin resistance protein 375063..375434 Muricauda ruestringensis DSM 13258 11053178 YP_004786847.1 CDS Murru_0371 NC_015945.1 375905 376465 D InterPro IPR005625; KEGG: ran:Riean_1759 DNA mismatch repair protein; PFAM: PepSY-associated TM helix; SPTR: Putative uncharacterized protein; PepSY-associated TM helix domain-containing protein 375905..376465 Muricauda ruestringensis DSM 13258 11053180 YP_004786848.1 CDS Murru_0372 NC_015945.1 376586 377983 R PFAM: PA domain; Peptidase family M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: fbc:FB2170_01100 peptidase, M28D family protein; PFAM: Peptidase M28; SPTR: Peptidase, M28D family protein; peptidase M28 complement(376586..377983) Muricauda ruestringensis DSM 13258 11053181 YP_004786849.1 CDS Murru_0373 NC_015945.1 377980 378864 R PFAM: Polyphosphate kinase 2 (PPK2); TIGRFAM: polyphosphate:nucleotide phosphotransferase, PPK2 family; COGs: COG2326 conserved hypothetical protein; InterPro IPR022300:IPR022488; KEGG: fbc:FB2170_01105 hypothetical protein; PFAM: Polyphosphate kinase-2-related; SPTR: Putative uncharacterized protein; TIGRFAM: Polyphosphate:nucleotide phosphotransferase, PPK2; polyphosphate:nucleotide phosphotransferase complement(377980..378864) Muricauda ruestringensis DSM 13258 11053182 YP_004786850.1 CDS Murru_0374 NC_015945.1 379047 379757 D KEGG: fbc:FB2170_01110 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 379047..379757 Muricauda ruestringensis DSM 13258 11053183 YP_004786851.1 CDS Murru_0375 NC_015945.1 379760 380923 R PFAM: Response regulator receiver domain; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078; KEGG: fbc:FB2170_01115 C4-dicarboxylate transport transcriptional regulatory protein; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core; SPTR: C4-dicarboxylate transport transcriptional regulatory protein; putative two component sigma-54 specific transcriptional regulator complement(379760..380923) Muricauda ruestringensis DSM 13258 11053184 YP_004786852.1 CDS Murru_0376 NC_015945.1 380934 381830 R KEGG: fbc:FB2170_01120 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein complement(380934..381830) Muricauda ruestringensis DSM 13258 11053185 YP_004786853.1 CDS Murru_0377 NC_015945.1 381837 382724 R PFAM: Mechanosensitive ion channel; COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: rbi:RB2501_11207 putative efflux protein; PFAM: Mechanosensitive ion channel MscS; SPTR: Putative efflux protein; mechanosensitive ion channel protein MscS complement(381837..382724) Muricauda ruestringensis DSM 13258 11053186 YP_004786854.1 CDS Murru_0378 NC_015945.1 382731 384068 R COGs: COG1668 ABC-type Na+ efflux pump permease component; KEGG: fbc:FB2170_01125 ABC transporter permease; SPTR: ABC transporter, permease protein, putative; ABC transporter permease complement(382731..384068) Muricauda ruestringensis DSM 13258 11053187 YP_004786855.1 CDS Murru_0379 NC_015945.1 384058 384996 R PFAM: ABC transporter; COGs: COG4152 ABC-type uncharacterized transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_01130 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; ABC transporter-like protein complement(384058..384996) Muricauda ruestringensis DSM 13258 11053188 YP_004786856.1 CDS Murru_0380 NC_015945.1 385258 386379 R PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ; COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; HAMAP: Chaperone DnaJ; InterPro IPR001623:IPR012724:IPR001305:IPR002939; KEGG: fbc:FB2170_01135 chaperone protein DnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, cysteine-rich domain; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Chaperone protein dnaJ; chaperone protein dnaJ complement(385258..386379) Muricauda ruestringensis DSM 13258 11053189 YP_004786857.1 CDS Murru_0381 NC_015945.1 386386 386961 R PFAM: GrpE; COGs: COG0576 Molecular chaperone GrpE (heat shock protein); HAMAP: GrpE nucleotide exchange factor; InterPro IPR000740; KEGG: fbc:FB2170_01140 GrpE protein; PFAM: GrpE nucleotide exchange factor; SPTR: Protein grpE; protein grpE complement(386386..386961) Muricauda ruestringensis DSM 13258 11053190 YP_004786858.1 CDS Murru_0382 NC_015945.1 387112 388056 R PFAM: NAD dependent epimerase/dehydratase family; Domain of unknown function (DUF1731); TIGRFAM: TIGR01777 family protein; COGs: COG1090 nucleoside-diphosphate sugar epimerase; InterPro IPR010099:IPR005913:IPR013549; KEGG: fbc:FB2170_01145 cell division inhibitor; PFAM: Domain of unknown function DUF1731, C-terminal; dTDP-4-dehydrorhamnose reductase; SPTR: Cell division inhibitor; hypothetical protein complement(387112..388056) Muricauda ruestringensis DSM 13258 11053191 YP_004786859.1 CDS Murru_0383 NC_015945.1 388188 388853 R PFAM: Protein of unknown function (DUF752); COGs: COG4121 conserved hypothetical protein; InterPro IPR008471; KEGG: fbc:FB2170_01150 hypothetical protein; PFAM: Domain of unknown function DUF752; SPTR: Putative uncharacterized protein; hypothetical protein complement(388188..388853) Muricauda ruestringensis DSM 13258 11053192 YP_004786860.1 CDS Murru_0384 NC_015945.1 388850 389326 R KEGG: fbc:FB2170_01155 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(388850..389326) Muricauda ruestringensis DSM 13258 11053193 YP_004786861.1 CDS Murru_0385 NC_015945.1 389433 390503 D PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II; COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR005786:IPR001544; KEGG: rbi:RB2501_11167 branched-chain amino acid aminotransferase; PFAM: Aminotransferase, class IV; PRIAM: Branched-chain-amino-acid transaminase; SPTR: Branched-chain-amino-acid aminotransferase; TIGRFAM: Branched-chain amino acid aminotransferase II; branched-chain amino acid aminotransferase 389433..390503 Muricauda ruestringensis DSM 13258 11053194 YP_004786862.1 CDS Murru_0386 NC_015945.1 390537 390923 R PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; KEGG: fbc:FB2170_01172 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(390537..390923) Muricauda ruestringensis DSM 13258 11053195 YP_004786863.1 CDS Murru_0387 NC_015945.1 390963 391151 D KEGG: fbc:FB2170_01177 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 390963..391151 Muricauda ruestringensis DSM 13258 11053196 YP_004786864.1 CDS Murru_0388 NC_015945.1 391270 391449 D hypothetical protein 391270..391449 Muricauda ruestringensis DSM 13258 11053197 YP_004786865.1 CDS Murru_0389 NC_015945.1 391466 391840 D PFAM: CrcB-like protein; TIGRFAM: crcB protein; COGs: COG0239 Integral membrane protein possibly involved in chromosome condensation; HAMAP: Camphor resistance CrcB protein; InterPro IPR003691; KEGG: fbc:FB2170_01182 hypothetical protein; PFAM: Camphor resistance CrcB protein; SPTR: Protein CrcB homolog; TIGRFAM: Camphor resistance CrcB protein; CrcB-like protein 391466..391840 Muricauda ruestringensis DSM 13258 11053198 YP_004786866.1 CDS Murru_0390 NC_015945.1 392110 392448 D PFAM: Nitrogen regulatory protein P-II; COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: rbi:RB2501_11137 P-II family protein; PFAM: Nitrogen regulatory protein PII; SMART: Nitrogen regulatory protein PII; SPTR: P-II family protein; nitrogen regulatory protein P-II 392110..392448 Muricauda ruestringensis DSM 13258 11053199 YP_004786867.1 CDS Murru_0391 NC_015945.1 392481 393761 D PFAM: Ammonium Transporter Family; TIGRFAM: ammonium transporter; COGs: COG0004 Ammonia permease; InterPro IPR001905; KEGG: zpr:ZPR_3134 ammonium transporter; PFAM: Ammonium transporter; SPTR: Ammonium transporter; TIGRFAM: Ammonium transporter; ammonium transporter 392481..393761 Muricauda ruestringensis DSM 13258 11053200 YP_004786868.1 CDS Murru_0392 NC_015945.1 393896 394951 D KEGG: rbi:RB2501_11127 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 393896..394951 Muricauda ruestringensis DSM 13258 11053201 YP_004786869.1 CDS Murru_0393 NC_015945.1 395006 395644 R PFAM: Protein of unknown function (DUF1684); COGs: COG3358 conserved hypothetical protein; InterPro IPR012467; KEGG: fbc:FB2170_01202 hypothetical protein; PFAM: Protein of unknown function DUF1684; SPTR: Putative uncharacterized protein; hypothetical protein complement(395006..395644) Muricauda ruestringensis DSM 13258 11053202 YP_004786870.1 CDS Murru_0394 NC_015945.1 395709 397130 R KEGG: fbc:FB2170_01217 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(395709..397130) Muricauda ruestringensis DSM 13258 11053203 YP_004786871.1 CDS Murru_0395 NC_015945.1 397193 397645 R PFAM: AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019888:IPR019887; KEGG: rbi:RB2501_11112 putative transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; SPTR: Probable transcriptional regulatory protein, AsnC family protein; AsnC family transcriptional regulator complement(397193..397645) Muricauda ruestringensis DSM 13258 11053204 YP_004786872.1 CDS Murru_0396 NC_015945.1 397767 398168 D KEGG: fbc:FB2170_01232 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 397767..398168 Muricauda ruestringensis DSM 13258 11053205 YP_004786873.1 CDS Murru_0397 NC_015945.1 398178 401753 R PFAM: ArgK protein; Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase C-terminal domain; COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006158:IPR005129:IPR006099; KEGG: gfo:GFO_0483 methylmalonyl-CoA mutase-like protein; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; ArgK protein; Cobalamin (vitamin B12)-binding; PRIAM: Methylmalonyl-CoA mutase; SPTR: Methylmalonyl-CoA mutase-like protein; methylmalonyl-CoA mutase complement(398178..401753) Muricauda ruestringensis DSM 13258 11053206 YP_004786874.1 CDS Murru_0398 NC_015945.1 401779 402627 D PFAM: Formyl transferase; TIGRFAM: formyltetrahydrofolate deformylase; COGs: COG0788 Formyltetrahydrofolate hydrolase; InterPro IPR004810:IPR002912:IPR002376; KEGG: fbc:FB2170_01237 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal; Amino acid-binding ACT; PRIAM: Formyltetrahydrofolate deformylase; SPTR: Formyltetrahydrofolate deformylase; TIGRFAM: Formyltetrahydrofolate deformylase; formyltetrahydrofolate deformylase 401779..402627 Muricauda ruestringensis DSM 13258 11053207 YP_004786875.1 CDS Murru_0399 NC_015945.1 402846 404198 D PFAM: Major Facilitator Superfamily; COGs: COG2211 Na+/melibiose symporter and related transporter; InterPro IPR011701; KEGG: zpr:ZPR_2820 sugar (GPH):cation symporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Sugar (GPH):cation symporter; major facilitator superfamily protein 402846..404198 Muricauda ruestringensis DSM 13258 11053208 YP_004786876.1 CDS Murru_0400 NC_015945.1 404308 406599 D PFAM: Glycosyl hydrolase family 65, C-terminal domain; Glycosyl hydrolase family 65, N-terminal domain; Glycosyl hydrolase family 65 central catalytic domain; COGs: COG1554 Trehalose and maltose hydrolase (possible phosphorylase); InterPro IPR005196:IPR005195:IPR005194; KEGG: fbc:FB2170_08179 trehalose/maltose hydrolase (phosphorylase); PFAM: Glycoside hydrolase, family 65, central catalytic; Glycoside hydrolase, family 65, N-terminal; Glycoside hydrolase, family 65, C-terminal; PRIAM: Kojibiose phosphorylase; SPTR: Trehalose/maltose hydrolase (Phosphorylase); Kojibiose phosphorylase 404308..406599 Muricauda ruestringensis DSM 13258 11053209 YP_004786877.1 CDS Murru_0401 NC_015945.1 406711 407415 D KEGG: fbc:FB2170_01242 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 406711..407415 Muricauda ruestringensis DSM 13258 11053210 YP_004786878.1 CDS Murru_0402 NC_015945.1 407600 408124 R KEGG: fbc:FB2170_01267 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(407600..408124) Muricauda ruestringensis DSM 13258 11053211 YP_004786879.1 CDS Murru_0403 NC_015945.1 408323 408514 D KEGG: fbc:FB2170_01277 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 408323..408514 Muricauda ruestringensis DSM 13258 11053212 YP_004786880.1 CDS Murru_0404 NC_015945.1 408531 409352 R PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 2; COGs: COG0284 Orotidine-5'-phosphate decarboxylase; HAMAP: Orotidine 5'-phosphate decarboxylase, type 2; InterPro IPR001754:IPR011995; KEGG: fbc:FB2170_01282 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase domain; PRIAM: Orotidine-5'-phosphate decarboxylase; SMART: Orotidine 5'-phosphate decarboxylase domain; SPTR: Orotidine 5'-phosphate decarboxylase; TIGRFAM: Orotidine 5'-phosphate decarboxylase, type 2; Orotidine 5'-phosphate decarboxylase complement(408531..409352) Muricauda ruestringensis DSM 13258 11053213 YP_004786881.1 CDS Murru_0405 NC_015945.1 409394 410470 R PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1; COGs: COG0216 Protein chain release factor A; HAMAP: Peptide chain release factor 1; InterPro IPR005139:IPR004373:IPR000352; KEGG: fbc:FB2170_01287 peptide chain release factor 1; PFAM: Peptide chain release factor class I/class II; Peptide chain release factor; SMART: Peptide chain release factor; SPTR: Peptide chain release factor 1; TIGRFAM: Peptide chain release factor 1; peptide chain release factor 1 complement(409394..410470) Muricauda ruestringensis DSM 13258 11053214 YP_004786882.1 CDS Murru_0406 NC_015945.1 410540 411835 R PFAM: Protein of unknown function (DUF3570); KEGG: fbc:FB2170_01292 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(410540..411835) Muricauda ruestringensis DSM 13258 11053215 YP_004786883.1 CDS Murru_0407 NC_015945.1 411870 412079 R KEGG: fbc:FB2170_01297 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(411870..412079) Muricauda ruestringensis DSM 13258 11053216 YP_004786884.1 CDS Murru_0408 NC_015945.1 412092 413087 R PFAM: ApbE family; COGs: COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; InterPro IPR003374; KEGG: fbc:FB2170_01302 membrane-associated lipoprotein involved in thiamine biosynthesis; PFAM: Thiamine synthesis ApbE/UPF0280; SPTR: Membrane-associated lipoprotein involved in thiamine biosynthesis; ApbE family lipoprotein complement(412092..413087) Muricauda ruestringensis DSM 13258 11053217 YP_004786885.1 CDS Murru_0409 NC_015945.1 413084 413521 R PFAM: Protein of unknown function, DUF255; KEGG: fbc:FB2170_01307 putative thioredoxin disulfide isomerase; SPTR: Putative thioredoxin disulfide isomerase; putative thioredoxin disulfide isomerase complement(413084..413521) Muricauda ruestringensis DSM 13258 11053218 YP_004786886.1 CDS Murru_0410 NC_015945.1 413542 413982 R PFAM: Rieske [2Fe-2S] domain; InterPro IPR017941; KEGG: fbc:FB2170_01312 hypothetical protein; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Putative uncharacterized protein; Rieske (2Fe-2S) domain-containing protein complement(413542..413982) Muricauda ruestringensis DSM 13258 11053219 YP_004786887.1 CDS Murru_0411 NC_015945.1 414031 415209 R PFAM: AIR synthase related protein, C-terminal domain; COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR010918; KEGG: fbc:FB2170_01317 putative phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase-related protein, C-terminal; PRIAM: Phosphoribosylformylglycinamidine cyclo-ligase; SPTR: Phosphoribosylformylglycinamidine cyclo-ligase; phosphoribosylformylglycinamidine cyclo-ligase complement(414031..415209) Muricauda ruestringensis DSM 13258 11053220 YP_004786888.1 CDS Murru_0412 NC_015945.1 415290 417476 R PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase type III N terminal; COGs: COG3968 Uncharacterized protein related to glutamine synthetase; InterPro IPR008146; KEGG: fbc:FB2170_01322 glutamine synthetase; PFAM: Glutamine synthetase, catalytic domain; SPTR: Glutamine synthetase; glutamine synthetase complement(415290..417476) Muricauda ruestringensis DSM 13258 11053221 YP_004786889.1 CDS Murru_0413 NC_015945.1 417479 417622 R hypothetical protein complement(417479..417622) Muricauda ruestringensis DSM 13258 11053222 YP_004786890.1 CDS Murru_0414 NC_015945.1 417688 418698 D PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; COGs: COG0174 Glutamine synthetase; InterPro IPR008147:IPR008146; KEGG: fbc:FB2170_01327 glutamine synthetase II; PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp; PRIAM: Glutamate--ammonia ligase; SPTR: Glutamine synthetase; glutamate--ammonia ligase 417688..418698 Muricauda ruestringensis DSM 13258 11053223 YP_004786891.1 CDS Murru_0415 NC_015945.1 418760 419698 R PFAM: Sodium/calcium exchanger protein; TIGRFAM: K+-dependent Na+/Ca+ exchanger related-protein; COGs: COG0530 Ca2+/Na+ antiporter; InterPro IPR004481:IPR004837; KEGG: fbc:FB2170_01337 sodium/calcium exchanger; PFAM: Sodium/calcium exchanger membrane region; SPTR: Sodium/calcium exchanger; TIGRFAM: K+-dependent Na+/Ca+ exchanger-like; CaCA family Na+/Ca+ antiporter complement(418760..419698) Muricauda ruestringensis DSM 13258 11053224 YP_004786892.1 CDS Murru_0416 NC_015945.1 419849 420208 D PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: fbc:FB2170_01342 putative antibiotic resistance-related regulatory protein; PFAM: Penicillinase repressor; SPTR: Putative antibiotic resistance-related regulatory protein; CopY family transcriptional repressor 419849..420208 Muricauda ruestringensis DSM 13258 11053225 YP_004786893.1 CDS Murru_0417 NC_015945.1 420223 421950 D PFAM: BlaR1 peptidase M56; TonB-dependent Receptor Plug Domain; InterPro IPR008756; KEGG: rbi:RB2501_11012 hypothetical protein; PFAM: Peptidase M56, BlaR1; SPTR: Putative uncharacterized protein; peptidase M56 BlaR1 420223..421950 Muricauda ruestringensis DSM 13258 11053226 YP_004786894.1 CDS Murru_0418 NC_015945.1 422474 422623 D KEGG: fbc:FB2170_01362 adenine phosphoribosyltransferase; SPTR: Putative uncharacterized protein; adenine phosphoribosyltransferase 422474..422623 Muricauda ruestringensis DSM 13258 11053227 YP_004786895.1 CDS Murru_0419 NC_015945.1 422614 423126 R PFAM: Phosphoribosyl transferase domain; TIGRFAM: adenine phosphoribosyltransferase; COGs: COG0503 Adenine/guanine phosphoribosyltransferase and related PRPP-binding protein; HAMAP: Adenine phosphoribosyl transferase; InterPro IPR005764:IPR000836; KEGG: fbc:FB2170_01367 adenine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Adenine phosphoribosyltransferase; TIGRFAM: Adenine phosphoribosyl transferase; adenine phosphoribosyltransferase complement(422614..423126) Muricauda ruestringensis DSM 13258 11053228 YP_004786896.1 CDS Murru_0420 NC_015945.1 423619 425301 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: zpr:ZPR_1605 mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase); PFAM: Sulfatase; SPTR: Mucin-desulfating sulfatase (N-acetylglucosamine-6-sulfatase); sulfatase 423619..425301 Muricauda ruestringensis DSM 13258 11053230 YP_004786897.1 CDS Murru_0421 NC_015945.1 425368 426468 D PFAM: Formylglycine-generating sulfatase enzyme; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: zpr:ZPR_2997 sulfatase-modifying factor; PFAM: Sulphatase-modifying factor; SPTR: Sulfatase-modifying factor; sulfatase-modifying factor protein 425368..426468 Muricauda ruestringensis DSM 13258 11053231 YP_004786898.1 CDS Murru_0422 NC_015945.1 426481 427293 D PFAM: AraC-like ligand binding domain; Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: fjo:Fjoh_2992 helix-turn-helix domain-containing protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family; AraC family transcriptional regulator 426481..427293 Muricauda ruestringensis DSM 13258 11053232 YP_004786899.1 CDS Murru_0423 NC_015945.1 427377 429851 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1455 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor domain protein; TonB-dependent receptor plug 427377..429851 Muricauda ruestringensis DSM 13258 11053233 YP_004786900.1 CDS Murru_0424 NC_015945.1 429943 430797 R PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; KEGG: fbc:FB2170_00390 putative universal stress protein UspA; SPTR: Putative universal stress protein UspA; putative universal stress protein UspA complement(429943..430797) Muricauda ruestringensis DSM 13258 11053234 YP_004786901.1 CDS Murru_0425 NC_015945.1 430804 431661 R PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: fbc:FB2170_00395 putative universal stress protein UspA; PFAM: UspA; SPTR: Putative universal stress protein UspA; UspA domain-containing protein complement(430804..431661) Muricauda ruestringensis DSM 13258 11053235 YP_004786902.1 CDS Murru_0426 NC_015945.1 431686 431853 D hypothetical protein 431686..431853 Muricauda ruestringensis DSM 13258 11053236 YP_004786903.1 CDS Murru_0427 NC_015945.1 431888 432961 D PFAM: HlyD family secretion protein; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fbc:FB2170_14523 hypothetical protein; PFAM: Secretion protein HlyD; SPTR: Putative uncharacterized protein; TIGRFAM: Secretion protein HlyD; manually curated; RND family efflux transporter MFP subunit 431888..432961 Muricauda ruestringensis DSM 13258 11053237 YP_004786904.1 CDS Murru_0428 NC_015945.1 432958 434220 D PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: fbc:FB2170_14528 hypothetical protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: ABC-type transport system; hypothetical protein 432958..434220 Muricauda ruestringensis DSM 13258 11053238 YP_004786905.1 CDS Murru_0429 NC_015945.1 434231 434908 D PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: rbi:RB2501_11877 ATPase; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; phosphonate-transporting ATPase 434231..434908 Muricauda ruestringensis DSM 13258 11053239 YP_004786906.1 CDS Murru_0430 NC_015945.1 434902 435777 R PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: mtt:Ftrac_0166 UspA domain-containing protein; PFAM: UspA; SPTR: UspA domain protein; UspA domain-containing protein complement(434902..435777) Muricauda ruestringensis DSM 13258 11053240 YP_004786907.1 CDS Murru_0431 NC_015945.1 435984 436448 D PFAM: Hsp20/alpha crystallin family; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: fbc:FB2170_00355 small heat shock protein; PFAM: Heat shock protein Hsp20; SPTR: Small heat shock protein; heat shock protein Hsp20 435984..436448 Muricauda ruestringensis DSM 13258 11053241 YP_004786908.1 CDS Murru_0432 NC_015945.1 436551 439196 D PFAM: E1-E2 ATPase; Cation transporting ATPase, C-terminus; haloacid dehalogenase-like hydrolase; Cation transporter/ATPase, N-terminus; TIGRFAM: plasma-membrane calcium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG0474 Cation transport ATPase; InterProIPR004014:IPR001757:IPR008250:IPR005834:IPR 006068; KEGG: cyc:PCC7424_1933 ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: ATPase, P-type, ATPase-associated domain; ATPase, P-type cation-transporter, N-terminal; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, C-terminal; PRIAM: Calcium-transporting ATPase; SMART: ATPase, P-type cation-transporter, N-terminal; SPTR: ATPase, P-type (Transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; P-type HAD superfamily ATPase 436551..439196 Muricauda ruestringensis DSM 13258 11053242 YP_004786909.1 CDS Murru_0433 NC_015945.1 439480 442026 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR001610:IPR003018:IPR003661:IPR 003594:IPR013655:IPR013767; KEGG: dfe:Dfer_5317 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; PAS fold-3; PAS fold; GAF; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; PAC motif; GAF; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS; multi-sensor signal transduction histidine kinase 439480..442026 Muricauda ruestringensis DSM 13258 11053243 YP_004786910.1 CDS Murru_0434 NC_015945.1 442031 443110 D PFAM: Bacterial regulatory proteins, crp family; Response regulator receiver domain; Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR001789:IPR000595:IPR001808; KEGG: dfe:Dfer_5316 transcriptional regulator, Crp/Fnr family; PFAM: Signal transduction response regulator, receiver domain; Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: Signal transduction response regulator, receiver domain; Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SPTR: Response Regulator Receiver Signal Transduction Histidine Kinase; Crp/Fnr family transcriptional regulator 442031..443110 Muricauda ruestringensis DSM 13258 11053244 YP_004786911.1 CDS Murru_0435 NC_015945.1 443171 444154 R PFAM: mce related protein; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: fbc:FB2170_00460 virulence factor Mce family protein; PFAM: Mammalian cell entry-related; SPTR: Virulence factor Mce family protein; mammalian cell entry domain-containing protein complement(443171..444154) Muricauda ruestringensis DSM 13258 11053245 YP_004786912.1 CDS Murru_0436 NC_015945.1 444156 444935 R PFAM: ABC transporter; COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_00465 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; phosphonate-transporting ATPase complement(444156..444935) Muricauda ruestringensis DSM 13258 11053246 YP_004786913.1 CDS Murru_0437 NC_015945.1 444932 445723 R PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: fbc:FB2170_00470 organic solvents resistance ABC transporter; PFAM: Domain of unknown function DUF140; SPTR: ABC-type transport system involved in resistance to organic solvents; TIGRFAM: Domain of unknown function DUF140; hypothetical protein complement(444932..445723) Muricauda ruestringensis DSM 13258 11053247 YP_004786914.1 CDS Murru_0438 NC_015945.1 445745 445906 D hypothetical protein 445745..445906 Muricauda ruestringensis DSM 13258 11053248 YP_004786915.1 CDS Murru_0439 NC_015945.1 445894 446280 R hypothetical protein complement(445894..446280) Muricauda ruestringensis DSM 13258 11053249 YP_004786916.1 CDS Murru_0440 NC_015945.1 446325 446780 D KEGG: fjo:Fjoh_4129 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 446325..446780 Muricauda ruestringensis DSM 13258 11053250 YP_004786917.1 CDS Murru_0441 NC_015945.1 446989 448704 R PFAM: Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; InterPro IPR013344:IPR013509:IPR000788; KEGG: tye:THEYE_A0131 ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; PRIAM: Ribonucleoside-diphosphate reductase; SPTR: Ribonucleoside-diphosphate reductase; TIGRFAM: Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; ribonucleoside-diphosphate reductase complement(446989..448704) Muricauda ruestringensis DSM 13258 11053251 YP_004786918.1 CDS Murru_0442 NC_015945.1 448754 449602 R PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: fbc:FB2170_14468 putative universal stress protein UspA; PFAM: UspA; SPTR: Putative universal stress protein UspA; UspA domain-containing protein complement(448754..449602) Muricauda ruestringensis DSM 13258 11053252 YP_004786919.1 CDS Murru_0443 NC_015945.1 449760 449933 R hypothetical protein complement(449760..449933) Muricauda ruestringensis DSM 13258 11053253 YP_004786920.1 CDS Murru_0444 NC_015945.1 449999 450544 R KEGG: dal:Dalk_0238 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(449999..450544) Muricauda ruestringensis DSM 13258 11053254 YP_004786921.1 CDS Murru_0445 NC_015945.1 450541 450792 R KEGG: chu:CHU_0965 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(450541..450792) Muricauda ruestringensis DSM 13258 11053255 YP_004786922.1 CDS Murru_0446 NC_015945.1 451080 451745 D PFAM: Dienelactone hydrolase family; KEGG: afr:AFE_2085 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 451080..451745 Muricauda ruestringensis DSM 13258 11053256 YP_004786923.1 CDS Murru_0447 NC_015945.1 451738 452373 D PFAM: Phosphoribosyl transferase domain; COGs: COG1926 phosphoribosyltransferase; InterPro IPR000836; KEGG: ddi:DDB_G0284365 hypothetical protein; PFAM: Phosphoribosyltransferase; SPTR: Putative uncharacterized protein; phosphoribosyltransferase 451738..452373 Muricauda ruestringensis DSM 13258 11053257 YP_004786924.1 CDS Murru_0448 NC_015945.1 452299 452598 R hypothetical protein complement(452299..452598) Muricauda ruestringensis DSM 13258 11053258 YP_004786925.1 CDS Murru_0449 NC_015945.1 452719 453357 R PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: tpd:Teth39_0637 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; type 11 methyltransferase complement(452719..453357) Muricauda ruestringensis DSM 13258 11053259 YP_004786926.1 CDS Murru_0450 NC_015945.1 453491 453697 R PFAM: Protein of unknown function (DUF1458); InterPro IPR009923; KEGG: cat:CA2559_01085 hypothetical protein; PFAM: Dodecin flavoprotein; SPTR: Putative uncharacterized protein; hypothetical protein complement(453491..453697) Muricauda ruestringensis DSM 13258 11053260 YP_004786927.1 CDS Murru_0451 NC_015945.1 453745 454224 R PFAM: Protein of unknown function (DUF2874); KEGG: fbc:FB2170_04930 nicotinic acid mononucleotide adenyltransferase; SPTR: Nicotinic acid mononucleotide adenyltransferase; nicotinic acid mononucleotide adenyltransferase complement(453745..454224) Muricauda ruestringensis DSM 13258 11053261 YP_004786928.1 CDS Murru_0452 NC_015945.1 454516 456915 D PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: phosphoenolpyruvate synthase; COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterPro IPR006319:IPR002192:IPR008279:IPR000121; KEGG: min:Minf_0020 phosphoenolpyruvate synthase/pyruvate phosphate dikinase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme; PRIAM: Pyruvate, water dikinase; SPTR: Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; TIGRFAM: Phosphoenolpyruvate synthase; phosphoenolpyruvate synthase 454516..456915 Muricauda ruestringensis DSM 13258 11053262 YP_004786929.1 CDS Murru_0453 NC_015945.1 457691 458092 D PFAM: Domain of unknown function DUF302; COGs: COG3439 conserved hypothetical protein; InterPro IPR005180; KEGG: fbc:FB2170_00455 hypothetical protein; PFAM: Domain of unknown function DUF302; SPTR: Putative uncharacterized protein; hypothetical protein 457691..458092 Muricauda ruestringensis DSM 13258 11053263 YP_004786930.1 CDS Murru_0454 NC_015945.1 458114 458284 D KEGG: ccb:Clocel_4267 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 458114..458284 Muricauda ruestringensis DSM 13258 11053264 YP_004786931.1 CDS Murru_0455 NC_015945.1 458327 459088 R PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: fbc:FB2170_00420 hypothetical protein; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Putative uncharacterized protein; 3-oxoacyl-ACP reductase complement(458327..459088) Muricauda ruestringensis DSM 13258 11053265 YP_004786932.1 CDS Murru_0456 NC_015945.1 459085 459762 R PFAM: KWG Leptospira; InterPro IPR011647; KEGG: fbc:FB2170_00415 hypothetical protein; PFAM: KWG Leptospira; SPTR: Putative uncharacterized protein; KWG repeat-containing protein complement(459085..459762) Muricauda ruestringensis DSM 13258 11053266 YP_004786933.1 CDS Murru_0457 NC_015945.1 459873 460325 R PFAM: Uncharacterized conserved protein (DUF2267); COGs: COG5502 conserved hypothetical protein; KEGG: fbc:FB2170_00410 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(459873..460325) Muricauda ruestringensis DSM 13258 11053267 YP_004786934.1 CDS Murru_0458 NC_015945.1 460675 461217 D COGs: COG4635 Flavodoxin; InterPro IPR003680; KEGG: htu:Htur_4324 protoporphyrinogen oxidase; PFAM: Flavodoxin-like fold; SPTR: Protoporphyrinogen oxidase; NAD(P)H dehydrogenase (quinone) 460675..461217 Muricauda ruestringensis DSM 13258 11053268 YP_004786935.1 CDS Murru_0459 NC_015945.1 461273 461728 D PFAM: Uncharacterized conserved protein (DUF2267); COGs: COG5502 conserved hypothetical protein; KEGG: fbc:FB2170_00410 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 461273..461728 Muricauda ruestringensis DSM 13258 11053269 YP_004786936.1 CDS Murru_0460 NC_015945.1 461890 462720 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: rbi:RB2501_03440 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family protein; AraC family transcriptional regulator 461890..462720 Muricauda ruestringensis DSM 13258 11053270 YP_004786937.1 CDS Murru_0461 NC_015945.1 462811 463356 D PFAM: Cupin domain; InterPro IPR013096; KEGG: rbi:RB2501_03435 polyketide synthesis domain-containing protein; PFAM: Cupin 2, conserved barrel; SPTR: Polyketide synthesis domain protein; cupin 2 barrel domain-containing protein 462811..463356 Muricauda ruestringensis DSM 13258 11053271 YP_004786938.1 CDS Murru_0462 NC_015945.1 463795 464238 R SPTR: Putative uncharacterized protein; hypothetical protein complement(463795..464238) Muricauda ruestringensis DSM 13258 11053272 YP_004786939.1 CDS Murru_0463 NC_015945.1 464278 466053 R KEGG: rbi:RB2501_14364 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(464278..466053) Muricauda ruestringensis DSM 13258 11053273 YP_004786940.1 CDS Murru_0464 NC_015945.1 466065 467381 R KEGG: rbi:RB2501_14359 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(466065..467381) Muricauda ruestringensis DSM 13258 11053274 YP_004786941.1 CDS Murru_0465 NC_015945.1 467378 468685 R KEGG: rbi:RB2501_14359 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(467378..468685) Muricauda ruestringensis DSM 13258 11053275 YP_004786942.1 CDS Murru_0466 NC_015945.1 468685 471492 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_12426 putative TonB-dependent outer membrane receptor protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative TonB-dependent outer membrane receptor protein; TonB-dependent receptor plug complement(468685..471492) Muricauda ruestringensis DSM 13258 11053276 YP_004786943.1 CDS Murru_0467 NC_015945.1 471785 472387 R hypothetical protein complement(471785..472387) Muricauda ruestringensis DSM 13258 11053277 YP_004786944.1 CDS Murru_0468 NC_015945.1 472552 472827 R PFAM: ATP-dependent Clp protease adaptor protein ClpS; InterPro IPR003769; KEGG: fbc:FB2170_01622 ribosomal protein L11 methyltransferase; PFAM: Adaptor protein ClpS, core; SPTR: Ribosomal protein L11 methyltransferase; ATP-dependent Clp protease adaptor protein ClpS complement(472552..472827) Muricauda ruestringensis DSM 13258 11053278 YP_004786945.1 CDS Murru_0469 NC_015945.1 472851 473684 R PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase; COGs: COG2264 Ribosomal protein L11 methylase; InterPro IPR010456; KEGG: fbc:FB2170_01627 ribosomal protein L11 methyltransferase; PFAM: Ribosomal L11 methyltransferase, PrmA; SPTR: Ribosomal protein L11 methyltransferase; ribosomal L11 methyltransferase complement(472851..473684) Muricauda ruestringensis DSM 13258 11053279 YP_004786946.1 CDS Murru_0470 NC_015945.1 473688 474437 R PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; COGs: COG0149 Triosephosphate isomerase; InterPro IPR000652; KEGG: fbc:FB2170_01632 triosephosphate isomerase; PFAM: Triosephosphate isomerase; PRIAM: Triose-phosphate isomerase; SPTR: Triosephosphate isomerase; TIGRFAM: Triosephosphate isomerase; triosephosphate isomerase complement(473688..474437) Muricauda ruestringensis DSM 13258 11053280 YP_004786947.1 CDS Murru_0471 NC_015945.1 474623 475762 R PFAM: DoxX; InterPro IPR011637; KEGG: fbc:FB2170_01637 hypothetical protein; PFAM: Uncharacterised protein family YphA; SPTR: Putative uncharacterized protein; DoxX family protein complement(474623..475762) Muricauda ruestringensis DSM 13258 11053281 YP_004786948.1 CDS Murru_0472 NC_015945.1 475932 476477 R PFAM: Domain of Unknown Function (DUF1599); InterPro IPR011630; KEGG: fbc:FB2170_01642 hypothetical protein; PFAM: Domain of unknown function DUF1599; SPTR: Putative uncharacterized protein; hypothetical protein complement(475932..476477) Muricauda ruestringensis DSM 13258 11053282 YP_004786949.1 CDS Murru_0473 NC_015945.1 476573 477406 D PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase; COGs: COG0294 Dihydropteroate synthase; InterPro IPR006390:IPR000489; KEGG: fps:FP1425 dihydropteroate synthase; PFAM: Pterin-binding; PRIAM: Dihydropteroate synthase; SPTR: Dihydropteroate synthase; TIGRFAM: Dihydropteroate synthase; manually curated; dihydropteroate synthase 476573..477406 Muricauda ruestringensis DSM 13258 11053283 YP_004786950.1 CDS Murru_0474 NC_015945.1 477451 478239 D PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: TIGR00159 family protein; COGs: COG1624 conserved hypothetical protein; InterPro IPR014046:IPR003390; KEGG: fbc:FB2170_01652 hypothetical protein; PFAM: DNA integrity scanning protein, DisA, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00159; hypothetical protein 477451..478239 Muricauda ruestringensis DSM 13258 11053284 YP_004786951.1 CDS Murru_0475 NC_015945.1 478560 480464 D KEGG: lby:Lbys_2407 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 478560..480464 Muricauda ruestringensis DSM 13258 11053285 YP_004786952.1 CDS Murru_0476 NC_015945.1 480472 480903 D hypothetical protein 480472..480903 Muricauda ruestringensis DSM 13258 11053286 YP_004786953.1 CDS Murru_0477 NC_015945.1 480919 481326 D hypothetical protein 480919..481326 Muricauda ruestringensis DSM 13258 11053287 YP_004786954.1 CDS Murru_0478 NC_015945.1 481348 483120 R PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: fbc:FB2170_01657 ATPase; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ATPase; xenobiotic-transporting ATPase complement(481348..483120) Muricauda ruestringensis DSM 13258 11053288 YP_004786955.1 CDS Murru_0479 NC_015945.1 483104 483868 R PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; COGs: COG0101 Pseudouridylate synthase; HAMAP: Pseudouridine synthase I, TruA; InterPro IPR001406:IPR020097; KEGG: gfo:GFO_0425 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; SPTR: tRNA pseudouridine synthase A 1; TIGRFAM: Pseudouridine synthase I, TruA; tRNA pseudouridine synthase A complement(483104..483868) Muricauda ruestringensis DSM 13258 11053289 YP_004786956.1 CDS Murru_0480 NC_015945.1 483948 484442 D TIGRFAM: phosphoesterase, MJ0936 family; COGs: COG0622 phosphoesterase; InterPro IPR000979:IPR004843; KEGG: fbc:FB2170_01667 hypothetical protein; PFAM: Metallo-dependent phosphatase; SPTR: Putative uncharacterized protein; TIGRFAM: Phosphodiesterase MJ0936; phosphodiesterase 483948..484442 Muricauda ruestringensis DSM 13258 11053290 YP_004786957.1 CDS Murru_0481 NC_015945.1 484509 484919 R KEGG: fbc:FB2170_01672 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(484509..484919) Muricauda ruestringensis DSM 13258 11053291 YP_004786958.1 CDS Murru_0482 NC_015945.1 485111 486730 D PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho; COGs: COG1158 Transcription termination factor; InterProIPR011112:IPR011129:IPR003593:IPR004665:IPR 011113:IPR000194; KEGG: fbc:FB2170_01677 transcription termination factor Rho; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, RNA-binding; Rho termination factor, N-terminal; SMART: Cold shock protein; Rho termination factor, N-terminal; ATPase, AAA+ type, core; SPTR: Transcription termination factor Rho; TIGRFAM: Transcription termination factor Rho; transcription termination factor Rho 485111..486730 Muricauda ruestringensis DSM 13258 11053292 YP_004786959.1 CDS Murru_0483 NC_015945.1 486861 487502 D KEGG: fbc:FB2170_01682 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 486861..487502 Muricauda ruestringensis DSM 13258 11053293 YP_004786960.1 CDS Murru_0484 NC_015945.1 487509 488198 D KEGG: fbc:FB2170_01687 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 487509..488198 Muricauda ruestringensis DSM 13258 11053294 YP_004786961.1 CDS Murru_0485 NC_015945.1 488292 488978 D KEGG: fbc:FB2170_01692 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 488292..488978 Muricauda ruestringensis DSM 13258 11053295 YP_004786962.1 CDS Murru_0486 NC_015945.1 489041 489292 R PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20; HAMAP: Ribosomal protein S20; InterPro IPR002583; KEGG: rbi:RB2501_10542 30S ribosomal protein S20; PFAM: Ribosomal protein S20; SPTR: 30S ribosomal protein S20; TIGRFAM: Ribosomal protein S20; 30S ribosomal protein S20 complement(489041..489292) Muricauda ruestringensis DSM 13258 11053296 YP_004786963.1 CDS Murru_0487 NC_015945.1 489626 491101 R PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); Prolyl-tRNA synthetase, C-terminal; TIGRFAM: prolyl-tRNA synthetase, family I; COGs: COG0442 Prolyl-tRNA synthetase; HAMAP: Prolyl-tRNA synthetase, class IIa, eukaryotic-type; InterPro IPR016061:IPR004499:IPR002314:IPR004154; KEGG: fbc:FB2170_01706 prolyl-tRNA synthetase; PFAM: Prolyl-tRNA synthetase, class II, C-terminal; Anticodon-binding; Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; PRIAM: Proline--tRNA ligase; SMART: Prolyl-tRNA synthetase, class II, C-terminal; SPTR: Prolyl-tRNA synthetase; TIGRFAM: Prolyl-tRNA synthetase, class IIa, eukaryotic-type; prolyl-tRNA synthetase complement(489626..491101) Muricauda ruestringensis DSM 13258 11053299 YP_004786964.1 CDS Murru_0488 NC_015945.1 491196 492488 D KEGG: rbi:RB2501_10527 prolyl-tRNA synthetase; SPTR: Prolyl-tRNA synthetase; prolyl-tRNA synthetase 491196..492488 Muricauda ruestringensis DSM 13258 11053300 YP_004786965.1 CDS Murru_0489 NC_015945.1 492525 494027 D PFAM: Uncharacterised protein family (UPF0164); Outer membrane protein transport protein (OMPP1/FadL/TodX); InterPro IPR005017; KEGG: fbc:FB2170_01726 hypothetical protein; PFAM: Membrane protein, aromatic hydrocarbon degradation; SPTR: Putative uncharacterized protein; aromatic hydrocarbon degradation membrane protein 492525..494027 Muricauda ruestringensis DSM 13258 11053301 YP_004786966.1 CDS Murru_0490 NC_015945.1 494079 495518 R KEGG: rbi:RB2501_10517 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(494079..495518) Muricauda ruestringensis DSM 13258 11053302 YP_004786967.1 CDS Murru_0491 NC_015945.1 495633 497435 R KEGG: fbc:FB2170_01736 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(495633..497435) Muricauda ruestringensis DSM 13258 11053303 YP_004786968.1 CDS Murru_0492 NC_015945.1 497569 498249 D PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; COGs: COG0302 GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; InterPro IPR001474:IPR020602; KEGG: fbc:FB2170_01741 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: GTP cyclohydrolase I; SPTR: GTP cyclohydrolase 1 2; TIGRFAM: GTP cyclohydrolase I; GTP cyclohydrolase 1 497569..498249 Muricauda ruestringensis DSM 13258 11053304 YP_004786969.1 CDS Murru_0493 NC_015945.1 498265 499746 D PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; COGs: COG0215 Cysteinyl-tRNA synthetase; InterPro IPR015273:IPR015803; KEGG: fbc:FB2170_01746 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia; Cysteinyl-tRNA synthetase, class Ia, DALR; PRIAM: Cysteine--tRNA ligase; SMART: Cysteinyl-tRNA synthetase, class Ia, DALR; SPTR: Cysteinyl-tRNA synthetase; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; cysteinyl-tRNA synthetase 498265..499746 Muricauda ruestringensis DSM 13258 11053305 YP_004786970.1 CDS Murru_0494 NC_015945.1 499800 500021 D PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD; COGs: COG0759 conserved hypothetical protein; HAMAP: Protein of unknown function DUF37; InterPro IPR002696; KEGG: fbc:FB2170_01751 hypothetical protein; PFAM: Protein of unknown function DUF37; SPTR: UPF0161 protein FB2170_01751; TIGRFAM: Protein of unknown function DUF37; hypothetical protein 499800..500021 Muricauda ruestringensis DSM 13258 11053306 YP_004786971.1 CDS Murru_0495 NC_015945.1 500089 501051 D PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; COGs: COG0682 Prolipoprotein diacylglyceryltransferase; HAMAP: Prolipoprotein diacylglyceryl transferase; InterPro IPR001640; KEGG: fbc:FB2170_01756 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; SPTR: Prolipoprotein diacylglyceryl transferase; TIGRFAM: Prolipoprotein diacylglyceryl transferase; prolipoprotein diacylglyceryl transferase 500089..501051 Muricauda ruestringensis DSM 13258 11053307 YP_004786972.1 CDS Murru_0496 NC_015945.1 501053 501541 D PFAM: Uncharacterized ACR, COG1430; COGs: COG1430 conserved hypothetical protein; InterPro IPR003795; KEGG: fbc:FB2170_01761 hypothetical protein; PFAM: Protein of unknown function DUF192; SPTR: Putative uncharacterized protein; hypothetical protein 501053..501541 Muricauda ruestringensis DSM 13258 11053308 YP_004786973.1 CDS Murru_0497 NC_015945.1 501542 502075 D COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: fbc:FB2170_01766 YkkB; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: YkkB; N-acetyltransferase GCN5 501542..502075 Muricauda ruestringensis DSM 13258 11053309 YP_004786974.1 CDS Murru_0498 NC_015945.1 502107 503357 D PFAM: ABC transporter; COGs: COG1119 ABC-type molybdenum transport system ATPase component/photorepair protein PhrA; InterPro IPR003593:IPR003439; KEGG: rbi:RB2501_10482 putative anion transport protein (ABC superfamily, ATP-binding protein); PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative anion transport protein (ABC superfamily, ATP-binding protein); ABC transporter-like protein 502107..503357 Muricauda ruestringensis DSM 13258 11053310 YP_004786975.1 CDS Murru_0499 NC_015945.1 503859 505322 D PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: rbi:RB2501_12587 hypothetical protein; PFAM: Glycosyl transferase, group 1; SPTR: Putative uncharacterized protein; group 1 glycosyl transferase 503859..505322 Muricauda ruestringensis DSM 13258 11053311 YP_004786976.1 CDS Murru_0500 NC_015945.1 505390 508356 R PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; COGs: COG0342 Preprotein translocase subunit SecD; InterProIPR005791:IPR022645:IPR005665:IPR022646:IPR 022813; KEGG: fbc:FB2170_01786 putative protein-export transmembrane SecDF protein; PFAM: Preprotein translocase, SecD/SecF/SecDF; SecD/SecF/SecDF export membrane protein, GG motif, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein, bacteria; SecF protein; protein-export membrane protein SecD complement(505390..508356) Muricauda ruestringensis DSM 13258 11053312 YP_004786977.1 CDS Murru_0501 NC_015945.1 508581 509507 R PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase, NAD-dependent; COGs: COG0039 Malate/lactate dehydrogenase; HAMAP: Malate dehydrogenase, NAD-dependent; InterPro IPR011275:IPR001236:IPR022383; KEGG: fbc:FB2170_01791 putative malate dehydrogenase; PFAM: Lactate/malate dehydrogenase, N-terminal; Lactate/malate dehydrogenase, C-terminal; PRIAM: L-lactate dehydrogenase; SPTR: Malate dehydrogenase; malate dehydrogenase complement(508581..509507) Muricauda ruestringensis DSM 13258 11053313 YP_004786978.1 CDS Murru_0502 NC_015945.1 509754 510125 D KEGG: fbc:FB2170_01796 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 509754..510125 Muricauda ruestringensis DSM 13258 11053314 YP_004786979.1 CDS Murru_0503 NC_015945.1 510203 511213 R KEGG: fbc:FB2170_01801 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(510203..511213) Muricauda ruestringensis DSM 13258 11053315 YP_004786980.1 CDS Murru_0504 NC_015945.1 511286 513226 R PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit; COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR003594:IPR001241:IPR011557:IPR013506:IPR 006171:IPR002288; KEGG: fbc:FB2170_01806 DNA gyrase subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, domain 2; ATPase-like, ATP-binding domain; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit B/N-terminal; ATPase-like, ATP-binding domain; SPTR: DNA gyrase subunit B; TIGRFAM: DNA gyrase, subunit B; DNA gyrase subunit B complement(511286..513226) Muricauda ruestringensis DSM 13258 11053316 YP_004786981.1 CDS Murru_0505 NC_015945.1 513483 515153 R PFAM: Asparagine synthase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); COGs: COG0367 Asparagine synthase (glutamine-hydrolyzing); InterPro IPR006426:IPR000583:IPR001962; KEGG: fbc:FB2170_01811 asparagine synthetase B; PFAM: Asparagine synthase; Glutamine amidotransferase, class-II; PRIAM: Asparagine synthase (glutamine-hydrolyzing); SPTR: Asparagine synthetase B; TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; asparagine synthase complement(513483..515153) Muricauda ruestringensis DSM 13258 11053317 YP_004786982.1 CDS Murru_0506 NC_015945.1 515393 515926 D PFAM: Protein of unknown function (DUF2911); KEGG: fbc:FB2170_01816 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 515393..515926 Muricauda ruestringensis DSM 13258 11053318 YP_004786983.1 CDS Murru_0507 NC_015945.1 516016 517635 R PFAM: Amidohydrolase family; COGs: COG1574 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR013108; KEGG: cat:CA2559_09378 predicted metal-dependent amidohydrolase with the TIM-barrel fold; PFAM: Amidohydrolase 3; SPTR: Predicted metal-dependent amidohydrolase with the TIM-barrel fold; amidohydrolase complement(516016..517635) Muricauda ruestringensis DSM 13258 11053319 YP_004786984.1 CDS Murru_0508 NC_015945.1 517717 519462 R KEGG: fbc:FB2170_01876 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(517717..519462) Muricauda ruestringensis DSM 13258 11053320 YP_004786985.1 CDS Murru_0509 NC_015945.1 519475 522498 R PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR001440; KEGG: fbc:FB2170_01881 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein; hypothetical protein complement(519475..522498) Muricauda ruestringensis DSM 13258 11053321 YP_004786986.1 CDS Murru_0510 NC_015945.1 522811 523356 D PFAM: LemA family; COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: opr:Ocepr_0058 LemA family protein; PFAM: LemA; SPTR: LemA protein; LemA family protein 522811..523356 Muricauda ruestringensis DSM 13258 11053322 YP_004786987.1 CDS Murru_0511 NC_015945.1 523372 524475 D PFAM: Protein of unknown function (DUF3137); KEGG: mtt:Ftrac_0043 galanin; SPTR: Putative uncharacterized protein; hypothetical protein 523372..524475 Muricauda ruestringensis DSM 13258 11053323 YP_004786988.1 CDS Murru_0512 NC_015945.1 524569 525252 D PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; COGs: COG2884 ATPase involved in cell division; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_01886 cell division ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Cell division ATP-binding protein; phosphonate-transporting ATPase 524569..525252 Muricauda ruestringensis DSM 13258 11053324 YP_004786989.1 CDS Murru_0513 NC_015945.1 525350 526108 D PFAM: ROK family; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: rbi:RB2501_10397 ROK family protein; PFAM: ROK; PRIAM: Polyphosphate--glucose phosphotransferase; SPTR: ROK family protein; polyphosphate--glucose phosphotransferase 525350..526108 Muricauda ruestringensis DSM 13258 11053325 YP_004786990.1 CDS Murru_0514 NC_015945.1 526321 528120 R PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain; COGs: COG1217 membrane GTPase involved in stress response; InterProIPR000640:IPR005225:IPR006298:IPR000795:IPR 004161; KEGG: zpr:ZPR_3619 GTP-binding protein TypA; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SMART: Translation elongation factor EFG/EF2, C-terminal; SPTR: GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; GTP-binding protein TypA complement(526321..528120) Muricauda ruestringensis DSM 13258 11053326 YP_004786991.1 CDS Murru_0515 NC_015945.1 528220 528759 R KEGG: gfo:GFO_2811 secreted protein; SPTR: Secreted protein; hypothetical protein complement(528220..528759) Muricauda ruestringensis DSM 13258 11053327 YP_004786992.1 CDS Murru_0516 NC_015945.1 528814 529371 R KEGG: gfo:GFO_2811 secreted protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(528814..529371) Muricauda ruestringensis DSM 13258 11053328 YP_004786993.1 CDS Murru_0517 NC_015945.1 529437 530018 R KEGG: gfo:GFO_2811 secreted protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(529437..530018) Muricauda ruestringensis DSM 13258 11053329 YP_004786994.1 CDS Murru_0518 NC_015945.1 530092 530910 D PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; COGs: COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; InterPro IPR006269:IPR006218; KEGG: rbi:RB2501_10387 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-8-phosphooctulonate synthase; SPTR: 2-dehydro-3-deoxyphosphooctonate aldolase; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; 2-dehydro-3-deoxyphosphooctonate aldolase 530092..530910 Muricauda ruestringensis DSM 13258 11053330 YP_004786995.1 CDS Murru_0519 NC_015945.1 531075 533537 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; PEGA domain; COGs: COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid; InterPro IPR010105:IPR013229:IPR012910:IPR000531; KEGG: gfo:GFO_2191 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; PEGA; SPTR: Ferrichrome-iron receptor; TIGRFAM: TonB-dependent siderophore receptor; TonB-dependent siderophore receptor 531075..533537 Muricauda ruestringensis DSM 13258 11053331 YP_004786996.1 CDS Murru_0520 NC_015945.1 533548 534264 D PFAM: Nickel uptake substrate-specific transmembrane region; InterPro IPR019613; KEGG: zpr:ZPR_2531 polyferredoxin-like protein; PFAM: Nickel transport complex, NikM subunit, transmembrane; SPTR: Polyferredoxin-like protein; nickel transport complex transmembrane protein NikM 533548..534264 Muricauda ruestringensis DSM 13258 11053332 YP_004786997.1 CDS Murru_0521 NC_015945.1 534268 534600 D KEGG: fjo:Fjoh_1254 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 534268..534600 Muricauda ruestringensis DSM 13258 11053333 YP_004786998.1 CDS Murru_0522 NC_015945.1 534604 534903 D KEGG: fjo:Fjoh_1253 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 534604..534903 Muricauda ruestringensis DSM 13258 11053334 YP_004786999.1 CDS Murru_0523 NC_015945.1 534908 536479 D COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625; KEGG: fjo:Fjoh_1252 PepSY-associated TM helix domain-containing protein; PFAM: PepSY-associated TM helix; SPTR: Membrane protein, putative; PepSY-associated TM helix domain-containing protein 534908..536479 Muricauda ruestringensis DSM 13258 11053335 YP_004787000.1 CDS Murru_0524 NC_015945.1 536476 536844 R PFAM: Domain of unknown function (DU1801); InterPro IPR014922; KEGG: rbi:RB2501_10382 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: Protein of unknown function DUF1801; SPTR: Putative uncharacterized protein; hypothetical protein complement(536476..536844) Muricauda ruestringensis DSM 13258 11053336 YP_004787001.1 CDS Murru_0525 NC_015945.1 536867 537736 R PFAM: Protein of unknown function (DUF808); COGs: COG2354 conserved hypothetical protein; InterPro IPR008526; KEGG: gfo:GFO_2648 hypothetical protein; PFAM: Protein of unknown function DUF808; SPTR: Conserved hypothetical transmembrane protein; hypothetical protein complement(536867..537736) Muricauda ruestringensis DSM 13258 11053337 YP_004787002.1 CDS Murru_0526 NC_015945.1 537836 538294 R PFAM: Putative small multi-drug export protein; COGs: COG2426 membrane protein; InterPro IPR009577; KEGG: fbc:FB2170_06600 putative small multidrug export protein; PFAM: Putative small multi-drug export; SPTR: Putative small multidrug export protein; small multi-drug export protein complement(537836..538294) Muricauda ruestringensis DSM 13258 11053338 YP_004787003.1 CDS Murru_0527 NC_015945.1 538509 539624 D PFAM: PHP domain; InterPro IPR004013; KEGG: rbi:RB2501_10377 hypothetical protein; PFAM: PHP, C-terminal; SPTR: Putative uncharacterized protein; PHP domain-containing protein 538509..539624 Muricauda ruestringensis DSM 13258 11053339 YP_004787004.1 CDS Murru_0528 NC_015945.1 539626 539895 R hypothetical protein complement(539626..539895) Muricauda ruestringensis DSM 13258 11053340 YP_004787005.1 CDS Murru_R0006 NC_015945.1 539976 541181 R PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; COGs: COG0686 Alanine dehydrogenase; InterPro IPR007886; KEGG: fbc:FB2170_01970 hypothetical protein; PFAM: Alanine dehydrogenase/PNT, N-terminal; PRIAM: Saccharopine dehydrogenase (NADP(+), L-lysine-forming); SPTR: Putative uncharacterized protein; tmRNA as predicted by Rfam (RF00023), score 156.25; saccharopine dehydrogenase complement(539976..541181) Muricauda ruestringensis DSM 13258 11053341 YP_004787006.1 CDS Murru_0531 NC_015945.1 543560 543676 D hypothetical protein 543560..543676 Muricauda ruestringensis DSM 13258 11053343 YP_004787007.1 CDS Murru_0534 NC_015945.1 546027 547418 R KEGG: psp:PSPPH_4348 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(546027..547418) Muricauda ruestringensis DSM 13258 11053346 YP_004787008.1 CDS Murru_0535 NC_015945.1 547435 549204 R KEGG: pat:Patl_1033 endonuclease I; SPTR: Extracellular nuclease; hypothetical protein complement(547435..549204) Muricauda ruestringensis DSM 13258 11053347 YP_004787009.1 CDS Murru_0536 NC_015945.1 549225 550709 R PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: zpr:ZPR_4168 sodium:sulfate symporter; PFAM: Sodium/sulphate symporter; SPTR: Sodium-dependent transporter; TIGRFAM: Sodium/sulphate symporter; anion transporter complement(549225..550709) Muricauda ruestringensis DSM 13258 11053348 YP_004787010.1 CDS Murru_0537 NC_015945.1 550706 551488 R KEGG: amu:Amuc_1270 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(550706..551488) Muricauda ruestringensis DSM 13258 11053349 YP_004787011.1 CDS Murru_0538 NC_015945.1 551513 552931 R PFAM: SusD family; KEGG: dfe:Dfer_1701 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(551513..552931) Muricauda ruestringensis DSM 13258 11053350 YP_004787012.1 CDS Murru_0539 NC_015945.1 552949 556200 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1702 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein probably involved in nutrient binding; TonB-dependent receptor plug complement(552949..556200) Muricauda ruestringensis DSM 13258 11053351 YP_004787013.1 CDS Murru_0540 NC_015945.1 556370 557530 D KEGG: zpr:ZPR_0363 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 556370..557530 Muricauda ruestringensis DSM 13258 11053352 YP_004787014.1 CDS Murru_0541 NC_015945.1 557540 559156 R PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); COGs: COG1866 Phosphoenolpyruvate carboxykinase (ATP); HAMAP: Phosphoenolpyruvate carboxykinase, ATP-utilising; InterPro IPR001272; KEGG: fbc:FB2170_07734 phosphoenolpyruvate carboxykinase; PFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; SPTR: Phosphoenolpyruvate carboxykinase [ATP] 1; TIGRFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; phosphoenolpyruvate carboxykinase complement(557540..559156) Muricauda ruestringensis DSM 13258 11053353 YP_004787015.1 CDS Murru_0542 NC_015945.1 559253 559468 R hypothetical protein complement(559253..559468) Muricauda ruestringensis DSM 13258 11053354 YP_004787016.1 CDS Murru_0543 NC_015945.1 559850 561913 R PFAM: F5/8 type C domain; Alpha-L-fucosidase; COGs: COG3669 Alpha-L-fucosidase; InterPro IPR000933:IPR000421; KEGG: fbc:FB2170_02090 putative lipoprotein; PFAM: Coagulation factor 5/8 type, C-terminal; Glycoside hydrolase, family 29; PRIAM: Alpha-L-fucosidase; SMART: Glycoside hydrolase, family 29; SPTR: Putative lipoprotein; alpha-L-fucosidase complement(559850..561913) Muricauda ruestringensis DSM 13258 11053355 YP_004787017.1 CDS Murru_0544 NC_015945.1 561996 562697 R PFAM: LrgB-like family; TIGRFAM: TIGR00659 family protein; COGs: COG1346 Putative effector of murein hydrolase; InterPro IPR007300; KEGG: zpr:ZPR_4311 LrgB-like family protein; PFAM: LrgB-like protein; SPTR: LrgB-like family protein; LrgB family protein complement(561996..562697) Muricauda ruestringensis DSM 13258 11053356 YP_004787018.1 CDS Murru_0545 NC_015945.1 562694 563026 R PFAM: LrgA family; COGs: COG1380 Putative effector of murein hydrolase LrgA; InterPro IPR005538; KEGG: zpr:ZPR_4312 putative transmembrane protein; PFAM: Uncharacterised protein family LrgA/YohJ; SPTR: Putative transmembrane protein; LrgA family protein complement(562694..563026) Muricauda ruestringensis DSM 13258 11053357 YP_004787019.1 CDS Murru_0546 NC_015945.1 563213 565813 R PFAM: Kelch motif; Sodium:solute symporter family; TIGRFAM: transporter, SSS family; cyclically-permuted mutatrotase family protein; COGs: COG0591 Na+/proline symporter; InterPro IPR006652:IPR019900:IPR001734; KEGG: fbc:FB2170_03920 hypothetical protein; PFAM: Sodium/solute symporter; Kelch repeat type 1; SMART: Kelch repeat type 1; SPTR: Putative uncharacterized protein; TIGRFAM: Sodium/solute symporter, subgroup; SSS sodium solute transporter superfamily protein complement(563213..565813) Muricauda ruestringensis DSM 13258 11053358 YP_004787020.1 CDS Murru_0547 NC_015945.1 565803 567890 R PFAM: Glycosyl hydrolase family 20, catalytic domain; Glycosyl hydrolase family 20, domain 2; COGs: COG3525 N-acetyl-beta-hexosaminidase; InterPro IPR015882:IPR015883; KEGG: amu:Amuc_1815 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Acetylhexosaminidase, subunit a/b; SPTR: Beta-N-acetylhexosaminidase; glycoside hydrolase complement(565803..567890) Muricauda ruestringensis DSM 13258 11053359 YP_004787021.1 CDS Murru_0548 NC_015945.1 567897 569495 R PFAM: BNR/Asp-box repeat; COGs: COG4409 Neuraminidase (sialidase); KEGG: coc:Coch_0016 exo-alpha-sialidase; SPTR: SiaC; exo-alpha-sialidase complement(567897..569495) Muricauda ruestringensis DSM 13258 11053360 YP_004787022.1 CDS Murru_0549 NC_015945.1 569495 570661 R PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); COGs: COG2942 N-acyl-D-glucosamine 2-epimerase; InterPro IPR010819; KEGG: fbc:FB2170_03930 N-acyl-D-glucosamine 2-epimerase; PFAM: N-acylglucosamine 2-epimerase; PRIAM: N-acylglucosamine 2-epimerase; SPTR: N-acyl-D-glucosamine 2-epimerase; N-acylglucosamine 2-epimerase complement(569495..570661) Muricauda ruestringensis DSM 13258 11053361 YP_004787023.1 CDS Murru_0550 NC_015945.1 570790 571518 D PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG2186 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: phe:Phep_3580 GntR domain protein; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal; SPTR: Putative GntR family regulatory protein; GntR family transcriptional regulator 570790..571518 Muricauda ruestringensis DSM 13258 11053362 YP_004787024.1 CDS Murru_0551 NC_015945.1 571818 573320 R PFAM: SusD family; InterPro IPR012944; KEGG: sli:Slin_2626 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(571818..573320) Muricauda ruestringensis DSM 13258 11053363 YP_004787025.1 CDS Murru_0552 NC_015945.1 573331 576636 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: pdi:BDI_2944 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein probably involved in nutrient binding; TonB-dependent receptor plug complement(573331..576636) Muricauda ruestringensis DSM 13258 11053364 YP_004787026.1 CDS Murru_0553 NC_015945.1 576724 577647 R PFAM: Dihydrodipicolinate synthetase family; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; InterPro IPR002220; KEGG: fbc:FB2170_03935 putative N-acetylneuraminate lyase (sialic acid lyase); PFAM: Dihydrodipicolinate synthetase; PRIAM: N-acetylneuraminate lyase; SPTR: Putative N-acetylneuraminate lyase (Sialic acid lyase); N-acetylneuraminate lyase complement(576724..577647) Muricauda ruestringensis DSM 13258 11053365 YP_004787027.1 CDS Murru_0554 NC_015945.1 578008 578685 D PFAM: HPP family; COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR007065; KEGG: chu:CHU_1999 CBS domain-containing protein; PFAM: HPP; SPTR: CBS-domain-containing membrane protein; HPP family protein 578008..578685 Muricauda ruestringensis DSM 13258 11053366 YP_004787028.1 CDS Murru_0555 NC_015945.1 578945 580768 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; InterPro IPR019734:IPR018060:IPR001440:IPR000005; KEGG: fba:FIC_01251 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; Tetratricopeptide TPR-1; SMART: Helix-turn-helix, AraC type, DNA binding domain; Tetratricopeptide repeat; SPTR: TPR-repeat-containing protein; AraC type helix-turn-helix domain-containing protein complement(578945..580768) Muricauda ruestringensis DSM 13258 11053367 YP_004787029.1 CDS Murru_0556 NC_015945.1 581319 584675 R PFAM: ASPIC and UnbV; FG-GAP repeat; InterPro IPR013517:IPR011519; KEGG: dfe:Dfer_4948 ASPIC/UnbV domain protein; PFAM: ASPIC/UnbV; FG-GAP; SPTR: Putative uncharacterized protein; ASPIC/UnbV domain-containing protein complement(581319..584675) Muricauda ruestringensis DSM 13258 11053368 YP_004787030.1 CDS Murru_0557 NC_015945.1 584808 586562 R PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_4950 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(584808..586562) Muricauda ruestringensis DSM 13258 11053369 YP_004787031.1 CDS Murru_0558 NC_015945.1 586585 589791 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_4949 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug complement(586585..589791) Muricauda ruestringensis DSM 13258 11053370 YP_004787032.1 CDS Murru_0559 NC_015945.1 590041 590748 R KEGG: fbc:FB2170_14763 Tat (twin-arginine translocation) pathway signal sequence domain-containing protein; SPTR: Tat (Twin-arginine translocation) pathway signal sequence domain protein; Tat (twin-arginine translocation) pathway signal sequence domain-containing protein complement(590041..590748) Muricauda ruestringensis DSM 13258 11053371 YP_004787033.1 CDS Murru_0560 NC_015945.1 590753 592474 R PFAM: FAD binding domain; GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR003953; KEGG: fbc:FB2170_14768 GMC oxidoreductase family protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: GMC oxidoreductase family protein; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein complement(590753..592474) Muricauda ruestringensis DSM 13258 11053372 YP_004787034.1 CDS Murru_0561 NC_015945.1 592616 593740 R KEGG: fbc:FB2170_04745 putative C-type cytochrome; SPTR: Probable c-type cytochrome; putative C-type cytochrome complement(592616..593740) Muricauda ruestringensis DSM 13258 11053373 YP_004787035.1 CDS Murru_0562 NC_015945.1 593953 594048 D hypothetical protein 593953..594048 Muricauda ruestringensis DSM 13258 11053374 YP_004787036.1 CDS Murru_0563 NC_015945.1 594125 595018 R PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: fbc:FB2170_09396 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; hypothetical protein complement(594125..595018) Muricauda ruestringensis DSM 13258 11053375 YP_004787037.1 CDS Murru_0564 NC_015945.1 595631 596785 D PFAM: Galactokinase galactose-binding signature; GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: galactokinase; COGs: COG0153 Galactokinase; InterPro IPR000705:IPR019539:IPR006204:IPR013750; KEGG: fbc:FB2170_14568 galactokinase; PFAM: GHMP kinase; Galactokinase galactose-binding domain; GHMP kinase, C-terminal; PRIAM: Galactokinase; SPTR: Galactokinase; TIGRFAM: Galactokinase; galactokinase 595631..596785 Muricauda ruestringensis DSM 13258 11053376 YP_004787038.1 CDS Murru_0565 NC_015945.1 596856 600182 R PFAM: ASPIC and UnbV; FG-GAP repeat; InterPro IPR011519:IPR013517; KEGG: dfe:Dfer_4738 ASPIC/UnbV domain protein; PFAM: ASPIC/UnbV; FG-GAP; SPTR: ASPIC/UnbV domain protein; ASPIC/UnbV domain-containing protein complement(596856..600182) Muricauda ruestringensis DSM 13258 11053377 YP_004787039.1 CDS Murru_0566 NC_015945.1 600304 602181 R PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_0301 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein complement(600304..602181) Muricauda ruestringensis DSM 13258 11053378 YP_004787040.1 CDS Murru_0567 NC_015945.1 602192 605416 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_0300 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor plug; TonB-dependent receptor complement(602192..605416) Muricauda ruestringensis DSM 13258 11053379 YP_004787041.1 CDS Murru_0568 NC_015945.1 605717 606733 D PFAM: Bacterial regulatory proteins, gntR family; COGs: COG1609 Transcriptional regulators; InterPro IPR000524; KEGG: fbc:FB2170_04715 FucR; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: FucR; regulatory protein GntR HTH 605717..606733 Muricauda ruestringensis DSM 13258 11053380 YP_004787042.1 CDS Murru_0569 NC_015945.1 606777 609983 D PFAM: domain; Glycosyl hydrolases family 2, TIM barrel domain; Glycosyl hydrolases family 2, sugar binding domain; Beta galactosidase small chain; COGs: COG3250 Beta-galactosidase/beta-glucuronidase; InterPro IPR006104:IPR006102:IPR006103:IPR004199; KEGG: zpr:ZPR_1388 beta-galactosidase; PFAM: Glycoside hydrolase, family 2, TIM barrel; Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; Glycoside hydrolase, family 42, domain 5; PRIAM: Beta-galactosidase; SPTR: Beta-galactosidase; beta-galactosidase 606777..609983 Muricauda ruestringensis DSM 13258 11053381 YP_004787043.1 CDS Murru_0570 NC_015945.1 610041 610973 D PFAM: Xylose isomerase-like TIM barrel; COGs: COG3622 Hydroxypyruvate isomerase; InterPro IPR012307; KEGG: fbc:FB2170_04990 putative glyoxylate-induced protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Probable glyoxylate-induced protein; xylose isomerase domain-containing protein 610041..610973 Muricauda ruestringensis DSM 13258 11053382 YP_004787044.1 CDS Murru_0571 NC_015945.1 610989 611948 D PFAM: Formylglycine-generating sulfatase enzyme; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: rbi:RB2501_00861 hypothetical protein; PFAM: Sulphatase-modifying factor; SPTR: Putative uncharacterized protein; sulfatase-modifying factor protein 610989..611948 Muricauda ruestringensis DSM 13258 11053383 YP_004787045.1 CDS Murru_0572 NC_015945.1 611974 613305 D PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: rbi:RB2501_00856 putative oxidoreductase; PFAM: Oxidoreductase, N-terminal; SPTR: Probable oxidoreductase; oxidoreductase domain-containing protein 611974..613305 Muricauda ruestringensis DSM 13258 11053384 YP_004787046.1 CDS Murru_0573 NC_015945.1 613617 613748 D hypothetical protein 613617..613748 Muricauda ruestringensis DSM 13258 11053385 YP_004787047.1 CDS Murru_0574 NC_015945.1 613705 614049 R hypothetical protein complement(613705..614049) Muricauda ruestringensis DSM 13258 11053386 YP_004787048.1 CDS Murru_0575 NC_015945.1 614356 615330 D PFAM: Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: gfo:GFO_1576 transmembrane family 2 fatty acid desaturase; PFAM: Fatty acid desaturase, type 1; PRIAM: Linoleoyl-CoA desaturase; SPTR: Transmembrane family 2 fatty acid desaturase; Linoleoyl-CoA desaturase 614356..615330 Muricauda ruestringensis DSM 13258 11053387 YP_004787049.1 CDS Murru_0576 NC_015945.1 615337 616491 D PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR014001:IPR001650:IPR011545; KEGG: rde:RD1_3138 putative ATP-dependent RNA helicase, putative; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent RNA helicase RhlE; DEAD/DEAH box helicase 615337..616491 Muricauda ruestringensis DSM 13258 11053388 YP_004787050.1 CDS Murru_0577 NC_015945.1 616519 616713 D PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1278 Cold shock protein; InterPro IPR011129:IPR002059; KEGG: phe:Phep_0530 cold-shock protein DNA-binding; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Putative cold shock protein; cold-shock DNA-binding domain-containing protein 616519..616713 Muricauda ruestringensis DSM 13258 11053389 YP_004787051.1 CDS Murru_0578 NC_015945.1 616745 616939 D PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1278 Cold shock protein; InterPro IPR011129:IPR002059; KEGG: gfo:GFO_1578 cold shock-like protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold shock-like protein; cold-shock DNA-binding domain-containing protein 616745..616939 Muricauda ruestringensis DSM 13258 11053390 YP_004787052.1 CDS Murru_0580 NC_015945.1 617534 619138 R PFAM: Calcineurin-like phosphoesterase; COGs: COG1409 phosphohydrolase; InterPro IPR004843; KEGG: fbc:FB2170_06300 putative phosphohydrolase; PFAM: Metallo-dependent phosphatase; SPTR: Predicted phosphohydrolase; metallophosphoesterase complement(617534..619138) Muricauda ruestringensis DSM 13258 11053392 YP_004787053.1 CDS Murru_0581 NC_015945.1 619138 620508 R PFAM: Aminotransferase class-III; COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterPro IPR005814; KEGG: dfe:Dfer_3092 4-aminobutyrate aminotransferase; PFAM: Aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: 4-aminobutyrate aminotransferase; acetylornithine transaminase complement(619138..620508) Muricauda ruestringensis DSM 13258 11053393 YP_004787054.1 CDS Murru_0582 NC_015945.1 620486 621754 R KEGG: dfe:Dfer_0342 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(620486..621754) Muricauda ruestringensis DSM 13258 11053394 YP_004787055.1 CDS Murru_0583 NC_015945.1 621757 623400 R PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; PA14 domain; COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR011658:IPR002591; KEGG: dfe:Dfer_3093 PA14 domain protein; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SMART: PA14; SPTR: Putative uncharacterized protein; type I phosphodiesterase/nucleotide pyrophosphatase complement(621757..623400) Muricauda ruestringensis DSM 13258 11053395 YP_004787056.1 CDS Murru_0584 NC_015945.1 623436 624890 R KEGG: sru:SRU_2860 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(623436..624890) Muricauda ruestringensis DSM 13258 11053396 YP_004787057.1 CDS Murru_0585 NC_015945.1 624910 628197 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: dfe:Dfer_1098 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Outer membrane protein; TonB-dependent receptor plug complement(624910..628197) Muricauda ruestringensis DSM 13258 11053397 YP_004787058.1 CDS Murru_0586 NC_015945.1 628479 629045 D PFAM: Cupin domain; Helix-turn-helix; InterPro IPR001387:IPR013096; KEGG: ppn:Palpr_0226 cupin 2 conserved barrel domain protein; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; helix-turn-helix domain-containing protein 628479..629045 Muricauda ruestringensis DSM 13258 11053398 YP_004787059.1 CDS Murru_0587 NC_015945.1 629046 629720 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; phosphonatase-like hydrolase; COGs: COG0546 phosphatase; InterPro IPR006439:IPR005834; KEGG: rba:RB5862 phosphatase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Probable phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase complement(629046..629720) Muricauda ruestringensis DSM 13258 11053399 YP_004787060.1 CDS Murru_0588 NC_015945.1 629717 630889 R PFAM: FAD dependent oxidoreductase; TIGRFAM: FAD dependent oxidoreductase TIGR03364; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR017741:IPR006076; KEGG: rba:RB5861 putative oxidase; PFAM: FAD dependent oxidoreductase; SPTR: Putative uncharacterized protein; TIGRFAM: FAD-dependent oxidoreductase, HpnW; FAD dependent oxidoreductase complement(629717..630889) Muricauda ruestringensis DSM 13258 11053400 YP_004787061.1 CDS Murru_0589 NC_015945.1 630879 632159 R KEGG: ilo:IL2592 hypothetical protein; SPTR: Uncharacterized conserved membrane protein, probable transporter; hypothetical protein complement(630879..632159) Muricauda ruestringensis DSM 13258 11053401 YP_004787062.1 CDS Murru_0590 NC_015945.1 632423 632941 R hypothetical protein complement(632423..632941) Muricauda ruestringensis DSM 13258 11053402 YP_004787063.1 CDS Murru_0591 NC_015945.1 633409 634173 R PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: dfe:Dfer_3433 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; hypothetical protein complement(633409..634173) Muricauda ruestringensis DSM 13258 11053403 YP_004787064.1 CDS Murru_0592 NC_015945.1 634337 634636 D PFAM: Thioredoxin; TIGRFAM: thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR005746:IPR013766; KEGG: fbc:FB2170_14483 thioredoxin C-2; PFAM: Thioredoxin domain; SPTR: Thioredoxin C-2; TIGRFAM: Thioredoxin; thioredoxin 634337..634636 Muricauda ruestringensis DSM 13258 11053404 YP_004787065.1 CDS Murru_0593 NC_015945.1 634649 635488 R PFAM: Universal stress protein family; InterPro IPR006016; KEGG: fbc:FB2170_00390 putative universal stress protein UspA; PFAM: UspA; SPTR: Putative universal stress protein UspA; UspA domain-containing protein complement(634649..635488) Muricauda ruestringensis DSM 13258 11053405 YP_004787066.1 CDS Murru_0594 NC_015945.1 635514 636359 R PFAM: Universal stress protein family; InterPro IPR006016; KEGG: fbc:FB2170_14473 universal stress protein family; PFAM: UspA; SPTR: Universal stress protein family; UspA domain-containing protein complement(635514..636359) Muricauda ruestringensis DSM 13258 11053406 YP_004787067.1 CDS Murru_0595 NC_015945.1 636659 638278 R PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG4146 symporter; InterPro IPR019900:IPR001734; KEGG: gfo:GFO_0701 sodium:solute symporter family protein; PFAM: Sodium/solute symporter; SPTR: Sodium:solute symporter family protein; TIGRFAM: Sodium/solute symporter, subgroup; SSS sodium solute transporter superfamily protein complement(636659..638278) Muricauda ruestringensis DSM 13258 11053407 YP_004787068.1 CDS Murru_0596 NC_015945.1 638288 639475 R PFAM: Aldose 1-epimerase; TIGRFAM: galactose mutarotase; COGs: COG2017 Galactose mutarotase; InterPro IPR008183; KEGG: rbi:RB2501_09535 aldose 1-epimerase; PFAM: Aldose 1-epimerase; PRIAM: Aldose 1-epimerase; SPTR: Aldose 1-epimerase; aldose 1-epimerase complement(638288..639475) Muricauda ruestringensis DSM 13258 11053408 YP_004787069.1 CDS Murru_0597 NC_015945.1 639498 641003 R PFAM: L-arabinose isomerase; L-arabinose isomerase C-terminal domain; COGs: COG2160 L-arabinose isomerase; HAMAP: L-arabinose isomerase; InterPro IPR003762; KEGG: zpr:ZPR_2148 L-arabinose isomerase; PFAM: L-arabinose isomerase; PRIAM: L-arabinose isomerase; SPTR: L-arabinose isomerase; L-arabinose isomerase complement(639498..641003) Muricauda ruestringensis DSM 13258 11053409 YP_004787070.1 CDS Murru_0598 NC_015945.1 641018 641719 R PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: fjo:Fjoh_1120 L-ribulose-5-phosphate 4-epimerase; PFAM: Class II aldolase/adducin, N-terminal; PRIAM: L-ribulose-5-phosphate 4-epimerase; SPTR: L-ribulose-5-phosphate 4-epimerase; L-ribulose-5-phosphate 4-epimerase complement(641018..641719) Muricauda ruestringensis DSM 13258 11053410 YP_004787071.1 CDS Murru_0599 NC_015945.1 641727 643400 R PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: L-ribulokinase; COGs: COG1069 Ribulose kinase; InterPro IPR005929:IPR018484:IPR018485; KEGG: gfo:GFO_0697 ribulokinase; PFAM: Carbohydrate kinase, FGGY, C-terminal; Carbohydrate kinase, FGGY, N-terminal; PRIAM: Ribulokinase; SPTR: Ribulokinase; TIGRFAM: L-ribulokinase; L-ribulokinase complement(641727..643400) Muricauda ruestringensis DSM 13258 11053411 YP_004787072.1 CDS Murru_0600 NC_015945.1 643673 645643 R PFAM: Putative glycosyl hydrolase of unknown function (DUF1680); COGs: COG3533 conserved hypothetical protein; InterPro IPR012878; KEGG: bth:BT_3674 hypothetical protein; PFAM: Protein of unknown function DUF1680; SPTR: Putative uncharacterized protein; hypothetical protein complement(643673..645643) Muricauda ruestringensis DSM 13258 11053412 YP_004787073.1 CDS Murru_0601 NC_015945.1 645671 647203 R PFAM: Alpha-L-arabinofuranosidase C-terminus; COGs: COG3534 Alpha-L-arabinofuranosidase; InterPro IPR010720; KEGG: zpr:ZPR_2141 alpha-L-arabinofuranosidase; PFAM: Alpha-L-arabinofuranosidase, C-terminal; SMART: Alpha-L-arabinofuranosidase, C-terminal; SPTR: Alpha-L-arabinofuranosidase; alpha-L-arabinofuranosidase complement(645671..647203) Muricauda ruestringensis DSM 13258 11053413 YP_004787074.1 CDS Murru_0602 NC_015945.1 647588 648325 D PFAM: NUDIX domain; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086; KEGG: rbi:RB2501_09560 hypothetical protein; PFAM: NUDIX hydrolase domain; SPTR: Putative uncharacterized protein; NUDIX hydrolase 647588..648325 Muricauda ruestringensis DSM 13258 11053414 YP_004787075.1 CDS Murru_0603 NC_015945.1 648347 650497 R PFAM: F5/8 type C domain; Glycosyl hydrolases family 43; COGs: COG3507 Beta-xylosidase; InterPro IPR006558:IPR006710:IPR000421; KEGG: lby:Lbys_0109 glycoside hydrolase family 43; PFAM: Glycoside hydrolase, family 43; Coagulation factor 5/8 type, C-terminal; SMART: LamG-like jellyroll fold; SPTR: Coagulation factor 5/8 type domain protein; glycoside hydrolase complement(648347..650497) Muricauda ruestringensis DSM 13258 11053415 YP_004787076.1 CDS Murru_0604 NC_015945.1 650522 653263 R KEGG: zpr:ZPR_1375 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(650522..653263) Muricauda ruestringensis DSM 13258 11053416 YP_004787077.1 CDS Murru_0605 NC_015945.1 653301 654998 R PFAM: Bacterial protein of unknown function (DUF885); COGs: COG4805 conserved hypothetical protein; InterPro IPR010281; KEGG: zpr:ZPR_1377 X-Pro dipeptidyl-peptidase; PFAM: Protein of unknown function DUF885; SPTR: X-Pro dipeptidyl-peptidase; hypothetical protein complement(653301..654998) Muricauda ruestringensis DSM 13258 11053417 YP_004787078.1 CDS Murru_0606 NC_015945.1 655195 658263 R PFAM: Putative glycosyl hydrolase of unknown function (DUF1680); Bacterial Ig-like domain (group 4); COGs: COG3533 conserved hypothetical protein; InterPro IPR012878; KEGG: cpi:Cpin_4617 protein of unknown function DUF1680; PFAM: Protein of unknown function DUF1680; SPTR: Putative uncharacterized protein; hypothetical protein complement(655195..658263) Muricauda ruestringensis DSM 13258 11053418 YP_004787079.1 CDS Murru_0607 NC_015945.1 658304 660556 R PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469:IPR001375; KEGG: zpr:ZPR_1379 prolyl oligopeptidase family; SPTR: Prolyl oligopeptidase family; prolyl oligopeptidase family complement(658304..660556) Muricauda ruestringensis DSM 13258 11053419 YP_004787080.1 CDS Murru_0608 NC_015945.1 660704 661948 R PFAM: FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: zpr:ZPR_1382 D-amino acid dehydrogenase; PFAM: FAD dependent oxidoreductase; PRIAM: D-amino-acid dehydrogenase; SPTR: D-amino acid dehydrogenase; D-amino-acid dehydrogenase complement(660704..661948) Muricauda ruestringensis DSM 13258 11053420 YP_004787081.1 CDS Murru_0609 NC_015945.1 661964 662971 R PFAM: Proline racemase; COGs: COG3938 Proline racemase; InterPro IPR008794; KEGG: fbc:FB2170_10616 proline racemase; PFAM: Proline racemase; PRIAM: 4-hydroxyproline epimerase; SPTR: Proline racemase; 4-hydroxyproline epimerase complement(661964..662971) Muricauda ruestringensis DSM 13258 11053421 YP_004787082.1 CDS Murru_0610 NC_015945.1 663024 664547 R PFAM: Aldehyde dehydrogenase family; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: fbc:FB2170_10611 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; PRIAM: Aldehyde dehydrogenase (NADP(+)); SPTR: Aldehyde dehydrogenase; aldehyde dehydrogenase complement(663024..664547) Muricauda ruestringensis DSM 13258 11053422 YP_004787083.1 CDS Murru_0611 NC_015945.1 664544 665467 R PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; HAMAP: Dihydrodipicolinate synthase; InterPro IPR002220; KEGG: zpr:ZPR_1385 dihydrodipicolinate synthetase; PFAM: Dihydrodipicolinate synthetase; PRIAM: Dihydrodipicolinate synthase; SPTR: Dihydrodipicolinate synthetase; dihydrodipicolinate synthase complement(664544..665467) Muricauda ruestringensis DSM 13258 11053423 YP_004787084.1 CDS Murru_0612 NC_015945.1 665600 666442 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: zpr:ZPR_1386 activator protein MtlR; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Activator protein MtlR; AraC family transcriptional regulator 665600..666442 Muricauda ruestringensis DSM 13258 11053424 YP_004787085.1 CDS Murru_0613 NC_015945.1 666606 668204 R PFAM: SusD family; InterPro IPR012944; KEGG: bvu:BVU_1134 hypothetical protein; PFAM: RagB/SusD; SPTR: Putative uncharacterized protein; RagB/SusD domain-containing protein complement(666606..668204) Muricauda ruestringensis DSM 13258 11053425 YP_004787086.1 CDS Murru_0614 NC_015945.1 668217 671213 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: bvu:BVU_1133 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative uncharacterized protein; TonB-dependent receptor plug complement(668217..671213) Muricauda ruestringensis DSM 13258 11053426 YP_004787087.1 CDS Murru_0615 NC_015945.1 671601 672971 D PFAM: Exonuclease; GIY-YIG catalytic domain; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR013520:IPR000305:IPR006055; KEGG: fbc:FB2170_02150 DNA polymerase III subunit epsilon; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal; PRIAM: DNA-directed DNA polymerase; SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; SPTR: DNA polymerase III, epsilon subunit; DNA-directed DNA polymerase 671601..672971 Muricauda ruestringensis DSM 13258 11053427 YP_004787088.1 CDS Murru_0616 NC_015945.1 672984 673760 R PFAM: Aldose 1-epimerase; InterPro IPR008183; KEGG: fbc:FB2170_02195 hypothetical protein; PFAM: Aldose 1-epimerase; SPTR: Putative uncharacterized protein; aldose 1-epimerase complement(672984..673760) Muricauda ruestringensis DSM 13258 11053428 YP_004787089.1 CDS Murru_0617 NC_015945.1 673760 675058 R PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650; KEGG: fbc:FB2170_02200 putative hydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; SPTR: Peptidase M20; peptidase M20 complement(673760..675058) Muricauda ruestringensis DSM 13258 11053429 YP_004787090.1 CDS Murru_0618 NC_015945.1 675123 676364 R PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: fbc:FB2170_02210 ABC transporter permease; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: ABC transporter permease protein; hypothetical protein complement(675123..676364) Muricauda ruestringensis DSM 13258 11053430 YP_004787091.1 CDS Murru_0619 NC_015945.1 676368 677591 D PFAM: Protein of unknown function (DUF1343); COGs: COG3876 conserved hypothetical protein; InterPro IPR008302; KEGG: fbc:FB2170_02215 hypothetical protein; PFAM: Uncharacterised conserved protein UCP016719; SPTR: Putative uncharacterized protein; hypothetical protein 676368..677591 Muricauda ruestringensis DSM 13258 11053431 YP_004787092.1 CDS Murru_0620 NC_015945.1 677722 678570 R PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: rbi:RB2501_10207 sterol desaturase-related protein; PFAM: Fatty acid hydroxylase; SPTR: Sterol desaturase-related protein; fatty acid hydroxylase complement(677722..678570) Muricauda ruestringensis DSM 13258 11053432 YP_004787093.1 CDS Murru_0621 NC_015945.1 678592 679086 R PFAM: Uncharacterised protein family (UPF0153); InterPro IPR005358; KEGG: fbc:FB2170_02220 hypothetical protein; PFAM: Uncharacterised protein family UPF0153; SPTR: Putative uncharacterized protein; hypothetical protein complement(678592..679086) Muricauda ruestringensis DSM 13258 11053433 YP_004787094.1 CDS Murru_0622 NC_015945.1 679314 680024 D PFAM: Tellurite resistance protein TehB; InterPro IPR013216; KEGG: fbc:FB2170_02230 putative methyltransferase; PFAM: Methyltransferase type 11; SPTR: Putative methyltransferase; type 11 methyltransferase 679314..680024 Muricauda ruestringensis DSM 13258 11053434 YP_004787095.1 CDS Murru_0623 NC_015945.1 680066 680866 D KEGG: fbc:FB2170_02235 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 680066..680866 Muricauda ruestringensis DSM 13258 11053435 YP_004787096.1 CDS Murru_0624 NC_015945.1 680876 681526 R PFAM: Radical SAM superfamily; COGs: COG0602 Organic radical activating protein; InterPro IPR007197; KEGG: fbc:FB2170_02240 hypothetical protein; PFAM: Radical SAM; SPTR: Putative uncharacterized protein; radical SAM protein complement(680876..681526) Muricauda ruestringensis DSM 13258 11053436 YP_004787097.1 CDS Murru_0625 NC_015945.1 681542 681994 R PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: sti:Sthe_1579 endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; SPTR: Putative endoribonuclease with L-PSP Domain; endoribonuclease L-PSP complement(681542..681994) Muricauda ruestringensis DSM 13258 11053437 YP_004787098.1 CDS Murru_0626 NC_015945.1 682051 683553 D PFAM: Bacterial protein of unknown function (DUF853); COGs: COG0433 ATPase; InterPro IPR008571; KEGG: fbc:FB2170_02245 hypothetical protein; PFAM: Protein of unknown function DUF853, nucleotide triphosphate hydrolase, putative; SPTR: Putative uncharacterized protein; hypothetical protein 682051..683553 Muricauda ruestringensis DSM 13258 11053438 YP_004787099.1 CDS Murru_0627 NC_015945.1 683561 684109 D KEGG: fbc:FB2170_02250 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 683561..684109 Muricauda ruestringensis DSM 13258 11053439 YP_004787100.1 CDS Murru_0628 NC_015945.1 684120 684542 R PFAM: HxlR-like helix-turn-helix; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: fbc:FB2170_02255 putative transcriptional regulator; PFAM: Helix-turn-helix, HxlR type; SPTR: Predicted transcriptional regulator; HxlR family transcriptional regulator complement(684120..684542) Muricauda ruestringensis DSM 13258 11053440 YP_004787101.1 CDS Murru_0629 NC_015945.1 684640 685479 D PFAM: Putative lysophospholipase; TAP-like protein; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: rbi:RB2501_10120 hydrolase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Hydrolase, putative; alpha/beta hydrolase fold protein 684640..685479 Muricauda ruestringensis DSM 13258 11053441 YP_004787102.1 CDS Murru_0630 NC_015945.1 685513 685935 D COGs: COG3565 dioxygenase of extradiol dioxygenase family; InterPro IPR004360; KEGG: fbc:FB2170_02265 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase; bleomycin resistance protein 685513..685935 Muricauda ruestringensis DSM 13258 11053442 YP_004787103.1 CDS Murru_0631 NC_015945.1 685937 686563 R PFAM: Predicted membrane protein (DUF2306); InterPro IPR018750; KEGG: fbc:FB2170_02285 hypothetical protein; PFAM: Protein of unknown function DUF2306, membrane; SPTR: Putative uncharacterized protein; hypothetical protein complement(685937..686563) Muricauda ruestringensis DSM 13258 11053443 YP_004787104.1 CDS Murru_0632 NC_015945.1 686684 686824 D hypothetical protein 686684..686824 Muricauda ruestringensis DSM 13258 11053444 YP_004787105.1 CDS Murru_0633 NC_015945.1 686830 687708 R PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; InterPro IPR020630:IPR020631:IPR000672; KEGG: fbc:FB2170_02300 putative methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; PRIAM: Methenyltetrahydrofolate cyclohydrolase; SPTR: Bifunctional protein folD; bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD complement(686830..687708) Muricauda ruestringensis DSM 13258 11053445 YP_004787106.1 CDS Murru_0634 NC_015945.1 687813 689141 R PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein; COGs: COG0541 Signal recognition particle GTPase; InterProIPR013822:IPR000897:IPR004125:IPR004780:IPR 003593; KEGG: fbc:FB2170_02305 signal recognition particle protein; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core; SPTR: Signal recognition particle protein; TIGRFAM: Signal recognition particle, SRP; signal recognition particle protein complement(687813..689141) Muricauda ruestringensis DSM 13258 11053446 YP_004787107.1 CDS Murru_0635 NC_015945.1 689445 690431 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: pdi:BDI_2233 transposase; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; SPTR: Transposase; transposase IS116/IS110/IS902 family protein 689445..690431 Muricauda ruestringensis DSM 13258 11053447 YP_004787108.1 CDS Murru_0636 NC_015945.1 690648 692408 R KEGG: rbi:RB2501_10070 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(690648..692408) Muricauda ruestringensis DSM 13258 11053448 YP_004787109.1 CDS Murru_0637 NC_015945.1 692522 693022 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: fbc:FB2170_02320 ECF family RNA polymerase sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 692522..693022 Muricauda ruestringensis DSM 13258 11053449 YP_004787110.1 CDS Murru_0638 NC_015945.1 693245 694159 D PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: fbc:FB2170_02325 hypothetical protein; PFAM: FecR protein; SPTR: Putative uncharacterized protein; anti-FecI sigma factor FecR 693245..694159 Muricauda ruestringensis DSM 13258 11053450 YP_004787111.1 CDS Murru_0639 NC_015945.1 694137 696704 D PFAM: TonB-dependent Receptor Plug Domain; InterPro IPR012910; KEGG: fbc:FB2170_02330 putative outer membrane protein; PFAM: TonB-dependent receptor, plug; SPTR: Putative outer membrane protein probably involved in nutrient binding; TonB-dependent receptor plug 694137..696704 Muricauda ruestringensis DSM 13258 11053451 YP_004787112.1 CDS Murru_0640 NC_015945.1 696796 697155 D PFAM: Protein of unknown function (DUF559); COGs: COG2852 conserved hypothetical protein; InterPro IPR007569; KEGG: mtt:Ftrac_2668 hypothetical protein; PFAM: Domain of unknown function DUF559; SPTR: Putative uncharacterized protein; hypothetical protein 696796..697155 Muricauda ruestringensis DSM 13258 11053452 YP_004787113.1 CDS Murru_0641 NC_015945.1 697198 698976 R PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; COGs: COG0018 Arginyl-tRNA synthetase; HAMAP: Arginyl-tRNA synthetase, class Ic; InterProIPR005148:IPR000494:IPR015945:IPR008909:IPR 001278; KEGG: fbc:FB2170_02350 arginyl-tRNA synthetase; PFAM: DALR anticodon binding; Arginyl-tRNA synthetase, class Ic, core; Arginyl tRNA synthetase, class Ic, N-terminal; EGF receptor, L domain; PRIAM: Arginine--tRNA ligase; SMART: DALR anticodon binding; SPTR: Arginyl-tRNA synthetase; TIGRFAM: Arginyl-tRNA synthetase, class Ic; arginyl-tRNA synthetase complement(697198..698976) Muricauda ruestringensis DSM 13258 11053453 YP_004787114.1 CDS Murru_0642 NC_015945.1 699070 699495 D KEGG: rbi:RB2501_10035 arginyl-tRNA synthetase; SPTR: Arginyl-tRNA synthetase; arginyl-tRNA synthetase 699070..699495 Muricauda ruestringensis DSM 13258 11053454 YP_004787115.1 CDS Murru_0643 NC_015945.1 699492 700916 D PFAM: Protein of unknown function (DUF2867); NmrA-like family; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR013120; KEGG: rbi:RB2501_10030 hypothetical protein; PFAM: Male sterility, NAD-binding; SPTR: Putative uncharacterized protein; hypothetical protein 699492..700916 Muricauda ruestringensis DSM 13258 11053455 YP_004787116.1 CDS Murru_0644 NC_015945.1 701238 702752 D KEGG: fbc:FB2170_04645 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 701238..702752 Muricauda ruestringensis DSM 13258 11053456 YP_004787117.1 CDS Murru_0645 NC_015945.1 702916 703062 D hypothetical protein 702916..703062 Muricauda ruestringensis DSM 13258 11053457 YP_004787118.1 CDS Murru_0646 NC_015945.1 703211 704146 R COGs: COG4874 Uncharacterized protein containing a pentein-type domain; KEGG: fbc:FB2170_02355 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein complement(703211..704146) Muricauda ruestringensis DSM 13258 11053458 YP_004787119.1 CDS Murru_0647 NC_015945.1 704200 705186 R PFAM: Amidinotransferase; COGs: COG1834 N-Dimethylarginine dimethylaminohydrolase; InterPro IPR003198; KEGG: fbc:FB2170_02360 DdaH family protein; PFAM: Amidinotransferase; SPTR: DdaH family protein; amidinotransferase complement(704200..705186) Muricauda ruestringensis DSM 13258 11053459 YP_004787120.1 CDS Murru_0648 NC_015945.1 705341 705850 D hypothetical protein 705341..705850 Muricauda ruestringensis DSM 13258 11053460 YP_004787121.1 CDS Murru_0649 NC_015945.1 705908 707191 R PFAM: Citrate synthase; TIGRFAM: citrate synthase I (hexameric type); COGs: COG0372 Citrate synthase; InterPro IPR002020:IPR010953; KEGG: rbi:RB2501_10015 citrate synthase; PFAM: Citrate synthase-like; PRIAM: Citrate (Si)-synthase; SPTR: Citrate synthase; TIGRFAM: Citrate synthase, type II; citrate synthase I complement(705908..707191) Muricauda ruestringensis DSM 13258 11053461 YP_004787122.1 CDS Murru_0650 NC_015945.1 707311 708849 R PFAM: Starch synthase catalytic domain; Glycosyl transferases group 1; TIGRFAM: glycogen/starch synthases, ADP-glucose type; COGs: COG0297 Glycogen synthase; InterPro IPR013534:IPR001296; KEGG: fbc:FB2170_02370 glycogen synthase; PFAM: Starch synthase, catalytic domain; Glycosyl transferase, group 1; PRIAM: Starch synthase; SPTR: Glycogen synthase; starch synthase complement(707311..708849) Muricauda ruestringensis DSM 13258 11053462 YP_004787123.1 CDS Murru_0651 NC_015945.1 708968 710260 R PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase; COGs: COG0148 Enolase; HAMAP: Enolase; InterPro IPR020811:IPR020810:IPR000941; KEGG: fbc:FB2170_02375 enolase; PFAM: Enolase, C-terminal; Enolase, N-terminal; PRIAM: Phosphopyruvate hydratase; SPTR: Enolase; TIGRFAM: Enolase; enolase complement(708968..710260) Muricauda ruestringensis DSM 13258 11053463 YP_004787124.1 CDS Murru_0652 NC_015945.1 710543 711655 R PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; COGs: COG0505 Carbamoylphosphate synthase small subunit; InterPro IPR002474:IPR000991:IPR006274; KEGG: fbc:FB2170_02380 carbamoyl-phosphate synthase small subunit; PFAM: Glutamine amidotransferase class-I, C-terminal; Carbamoyl-phosphate synthase, small subunit, N-terminal; PRIAM: Carbamoyl-phosphate synthase (glutamine-hydrolyzing); SPTR: Carbamoyl-phosphate synthase, small subunit; TIGRFAM: Carbamoyl-phosphate synthase, small subunit; carbamoyl-phosphate synthase small subunit complement(710543..711655) Muricauda ruestringensis DSM 13258 11053464 YP_004787125.1 CDS Murru_0653 NC_015945.1 711753 712265 R PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17; COGs: COG0203 Ribosomal protein L17; HAMAP: Ribosomal protein L17; InterPro IPR000456; KEGG: fbc:FB2170_02385 putative 50S ribosomal protein L17; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; 50S ribosomal protein L17 complement(711753..712265) Muricauda ruestringensis DSM 13258 11053465 YP_004787126.1 CDS Murru_0654 NC_015945.1 712326 713318 R PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type; COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit; HAMAP: DNA-directed RNA polymerase, alpha subunit; InterProIPR011261:IPR011262:IPR011260:IPR011773:IPR 011263; KEGG: fbc:FB2170_02390 DNA-directed RNA polymerase subunit alpha; PFAM: DNA-directed RNA polymerase, insert domain; DNA-directed RNA polymerase, dimerisation; RNA polymerase, alpha subunit, C-terminal; SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; SPTR: DNA-directed RNA polymerase alpha subunit; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; DNA-directed RNA polymerase subunit alpha complement(712326..713318) Muricauda ruestringensis DSM 13258 11053466 YP_004787127.1 CDS Murru_0655 NC_015945.1 713340 713945 R PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type; COGs: COG0522 Ribosomal protein S4 and related protein; InterPro IPR001912:IPR002942:IPR005709; KEGG: rbi:RB2501_09980 30S ribosomal protein S4; PFAM: Ribosomal protein S4/S9, N-terminal; RNA-binding S4; SMART: RNA-binding S4; SPTR: 30S ribosomal protein S4; TIGRFAM: Ribosomal protein S4, bacterial-type; 30S ribosomal protein S4 complement(713340..713945) Muricauda ruestringensis DSM 13258 11053467 YP_004787128.1 CDS Murru_0656 NC_015945.1 714055 714447 R PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; COGs: COG0100 Ribosomal protein S11; InterPro IPR001971:IPR019981; KEGG: fbc:FB2170_02400 30S ribosomal protein S11; PFAM: Ribosomal protein S11; SPTR: 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; 30S ribosomal protein S11 complement(714055..714447) Muricauda ruestringensis DSM 13258 11053468 YP_004787129.1 CDS Murru_0657 NC_015945.1 714460 714834 R PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13; COGs: COG0099 Ribosomal protein S13; InterPro IPR001892:IPR019980; KEGG: rbi:RB2501_09970 30S ribosomal protein S13; PFAM: Ribosomal protein S13; SPTR: 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; 30S ribosomal protein S13 complement(714460..714834) Muricauda ruestringensis DSM 13258 11053469 YP_004787130.1 CDS Murru_0658 NC_015945.1 714837 714953 R PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; HAMAP: Ribosomal protein L36; InterPro IPR000473; KEGG: cat:CA2559_05830 ribosomal protein L36; PFAM: Ribosomal protein L36; SPTR: 50S ribosomal protein L36; TIGRFAM: Ribosomal protein L36; manually curated; 50S ribosomal protein L36 complement(714837..714953) Muricauda ruestringensis DSM 13258 11053470 YP_004787131.1 CDS Murru_0659 NC_015945.1 714958 715173 R PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1; COGs: COG0361 Translation initiation factor 1 (IF-1); HAMAP: Translation initiation factor IF-1; InterPro IPR006196:IPR004368; KEGG: zpr:ZPR_3854 translation initiation factor IF-1; PFAM: RNA-binding domain, S1, IF1 type; SPTR: Translation initiation factor IF-1; TIGRFAM: Translation initiation factor IF-1; translation initiation factor IF-1 complement(714958..715173) Muricauda ruestringensis DSM 13258 11053471 YP_004787132.1 CDS Murru_0660 NC_015945.1 715177 716520 R PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; COGs: COG0201 Preprotein translocase subunit SecY; InterPro IPR002208; KEGG: fbc:FB2170_02420 preprotein translocase SecY; PFAM: SecY protein; SPTR: Preprotein translocase subunit secY; TIGRFAM: SecY protein; preprotein translocase subunit SecY complement(715177..716520) Muricauda ruestringensis DSM 13258 11053472 YP_004787133.1 CDS Murru_0661 NC_015945.1 716531 716983 R PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle; COGs: COG0200 Ribosomal protein L15; InterPro IPR005749; KEGG: fbc:FB2170_02425 putative 50S ribosomal protein L15; SPTR: 50S ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; 50S ribosomal protein L15 complement(716531..716983) Muricauda ruestringensis DSM 13258 11053473 YP_004787134.1 CDS Murru_0662 NC_015945.1 716997 717176 R PFAM: Ribosomal protein L30p/L7e; TIGRFAM: ribosomal protein L30, bacterial/organelle; COGs: COG1841 Ribosomal protein L30/L7E; InterPro IPR016082:IPR005996; KEGG: fbc:FB2170_02430 50S ribosomal protein L30; PFAM: Ribosomal protein L30, ferredoxin-like fold domain; SPTR: 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; 50S ribosomal protein L30 complement(716997..717176) Muricauda ruestringensis DSM 13258 11053474 YP_004787135.1 CDS Murru_0663 NC_015945.1 717189 717713 R PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type; COGs: COG0098 Ribosomal protein S5; InterPro IPR013810:IPR005324:IPR005712; KEGG: rbi:RB2501_09940 30S ribosomal protein S5; PFAM: Ribosomal protein S5, N-terminal; Ribosomal protein S5, C-terminal; SPTR: 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; 30S ribosomal protein S5 complement(717189..717713) Muricauda ruestringensis DSM 13258 11053475 YP_004787136.1 CDS Murru_0664 NC_015945.1 717720 718073 R PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type; COGs: COG0256 Ribosomal protein L18; InterPro IPR005484:IPR004389; KEGG: fbc:FB2170_02440 50S ribosomal protein L18; PFAM: Ribosomal protein L18/L5; SPTR: 50S ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; 50S ribosomal protein L18 complement(717720..718073) Muricauda ruestringensis DSM 13258 11053476 YP_004787137.1 CDS Murru_0665 NC_015945.1 718085 718627 R PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type; COGs: COG0097 Ribosomal protein L6P/L9E; InterPro IPR020040:IPR019906; KEGG: fbc:FB2170_02445 50S ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; SPTR: 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; 50S ribosomal protein L6 complement(718085..718627) Muricauda ruestringensis DSM 13258 11053477 YP_004787138.1 CDS Murru_0666 NC_015945.1 718647 719045 R PFAM: Ribosomal protein S8; COGs: COG0096 Ribosomal protein S8; InterPro IPR000630; KEGG: fbc:FB2170_02450 30S ribosomal protein S8; PFAM: Ribosomal protein S8; SPTR: 30S ribosomal protein S8; 30S ribosomal protein S8 complement(718647..719045) Muricauda ruestringensis DSM 13258 11053478 YP_004787139.1 CDS Murru_0667 NC_015945.1 719064 719333 R PFAM: Ribosomal protein S14p/S29e; COGs: COG0199 Ribosomal protein S14; HAMAP: Ribosomal protein S14, bacterial/plastid; InterPro IPR001209:IPR023036; KEGG: fbc:FB2170_02455 30S ribosomal protein S14; PFAM: Ribosomal protein S14; SPTR: 30S ribosomal protein S14; 30S ribosomal protein S14 complement(719064..719333) Muricauda ruestringensis DSM 13258 11053479 YP_004787140.1 CDS Murru_0668 NC_015945.1 719335 719886 R PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5; COGs: COG0094 Ribosomal protein L5; InterPro IPR002132; KEGG: rbi:RB2501_09915 50S ribosomal protein L5; PFAM: Ribosomal protein L5; SPTR: 50S ribosomal protein L5; 50S ribosomal protein L5 complement(719335..719886) Muricauda ruestringensis DSM 13258 11053480 YP_004787141.1 CDS Murru_0669 NC_015945.1 719889 720200 R PFAM: KOW motif; TIGRFAM: ribosomal protein L24, bacterial/organelle; COGs: COG0198 Ribosomal protein L24; InterPro IPR005824:IPR003256; KEGG: fbc:FB2170_02465 50S ribosomal protein L24; PFAM: KOW; SMART: KOW; SPTR: 50S ribosomal protein L24; TIGRFAM: Ribosomal protein L24; 50S ribosomal protein L24 complement(719889..720200) Muricauda ruestringensis DSM 13258 11053481 YP_004787142.1 CDS Murru_0670 NC_015945.1 720217 720585 R PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle; COGs: COG0093 Ribosomal protein L14; InterPro IPR000218:IPR005745; KEGG: rbi:RB2501_09905 50S ribosomal protein L14; PFAM: Ribosomal protein L14b/L23e; SPTR: 50S ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; 50S ribosomal protein L14 complement(720217..720585) Muricauda ruestringensis DSM 13258 11053482 YP_004787143.1 CDS Murru_0671 NC_015945.1 720588 720845 R PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; COGs: COG0186 Ribosomal protein S17; InterPro IPR000266:IPR019984; KEGG: fbc:FB2170_02475 30S ribosomal protein S17; PFAM: Ribosomal protein S17; SPTR: 30S ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; 30S ribosomal protein S17 complement(720588..720845) Muricauda ruestringensis DSM 13258 11053483 YP_004787144.1 CDS Murru_0672 NC_015945.1 720859 721050 R PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; InterPro IPR001854; KEGG: rbi:RB2501_09895 50S ribosomal protein L29; PFAM: Ribosomal protein L29; SPTR: 50S ribosomal protein L29; TIGRFAM: Ribosomal protein L29; 50S ribosomal protein L29 complement(720859..721050) Muricauda ruestringensis DSM 13258 11053484 YP_004787145.1 CDS Murru_0673 NC_015945.1 721070 721489 R PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle; COGs: COG0197 Ribosomal protein L16/L10E; HAMAP: Ribosomal protein L16; InterPro IPR016180:IPR000114; KEGG: fbc:FB2170_02485 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; SPTR: 50S ribosomal protein L16; TIGRFAM: Ribosomal protein L16; 50S ribosomal protein L16 complement(721070..721489) Muricauda ruestringensis DSM 13258 11053485 YP_004787146.1 CDS Murru_0674 NC_015945.1 721509 722219 R PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type; COGs: COG0092 Ribosomal protein S3; InterProIPR008282:IPR004044:IPR001351:IPR005704:IPR 004087; KEGG: rbi:RB2501_09885 30S ribosomal protein S3; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; SMART: K Homology; SPTR: 30S ribosomal protein S3; TIGRFAM: Ribosomal protein S3, bacterial; 30S ribosomal protein S3 complement(721509..722219) Muricauda ruestringensis DSM 13258 11053486 YP_004787147.1 CDS Murru_0675 NC_015945.1 722229 722636 R PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type; COGs: COG0091 Ribosomal protein L22; InterPro IPR001063:IPR005727; KEGG: fbc:FB2170_02495 50S ribosomal protein L22; PFAM: Ribosomal protein L22/L17; SPTR: 50S ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; 50S ribosomal protein L22 complement(722229..722636) Muricauda ruestringensis DSM 13258 11053487 YP_004787148.1 CDS Murru_0676 NC_015945.1 722644 722922 R PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle; COGs: COG0185 Ribosomal protein S19; InterPro IPR002222:IPR005732; KEGG: coc:Coch_1151 30S ribosomal protein S19; PFAM: Ribosomal protein S19/S15; SPTR: 30S ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; 30S ribosomal protein S19 complement(722644..722922) Muricauda ruestringensis DSM 13258 11053488 YP_004787149.1 CDS Murru_0677 NC_015945.1 722934 723758 R PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar; COGs: COG0090 Ribosomal protein L2; InterPro IPR022666:IPR022669:IPR005880; KEGG: rbi:RB2501_09870 50S ribosomal protein L2; PFAM: Ribosomal protein L2, C-terminal; Ribosomal Proteins L2, RNA binding domain; SPTR: 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; 50S ribosomal protein L2 complement(722934..723758) Muricauda ruestringensis DSM 13258 11053489 YP_004787150.1 CDS Murru_0678 NC_015945.1 723768 724058 R PFAM: Ribosomal protein L23; COGs: COG0089 Ribosomal protein L23; InterPro IPR013025; KEGG: fbc:FB2170_02510 putative 50S ribosomal protein L23; PFAM: Ribosomal protein L25/L23; SPTR: 50S ribosomal protein L23; 50S ribosomal protein L25 complement(723768..724058) Muricauda ruestringensis DSM 13258 11053490 YP_004787151.1 CDS Murru_0679 NC_015945.1 724066 724695 R PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle; COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: fbc:FB2170_02515 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; 50S ribosomal protein L4 complement(724066..724695) Muricauda ruestringensis DSM 13258 11053491 YP_004787152.1 CDS Murru_0680 NC_015945.1 724695 725312 R PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial; COGs: COG0087 Ribosomal protein L3; InterPro IPR000597:IPR019927; KEGG: fbc:FB2170_02520 50S ribosomal protein L3; PFAM: Ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; 50S ribosomal protein L3 complement(724695..725312) Muricauda ruestringensis DSM 13258 11053492 YP_004787153.1 CDS Murru_0681 NC_015945.1 725477 725782 R PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle; COGs: COG0051 Ribosomal protein S10; HAMAP: Ribosomal protein S10 subgroup; InterPro IPR001848:IPR005731; KEGG: fbc:FB2170_02525 30S ribosomal protein S10; PFAM: Ribosomal protein S10; SPTR: 30S ribosomal protein S10; TIGRFAM: Ribosomal protein S10 subgroup; 30S ribosomal protein S10 complement(725477..725782) Muricauda ruestringensis DSM 13258 11053493 YP_004787154.1 CDS Murru_0682 NC_015945.1 725795 727921 R PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; COGs: COG0480 Translation elongation factors (GTPase); InterProIPR000795:IPR004161:IPR005517:IPR000640:IPR 004540:IPR005225; KEGG: fbc:FB2170_02530 elongation factor EF-2; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; SMART: Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; SPTR: Elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; translation elongation factor G complement(725795..727921) Muricauda ruestringensis DSM 13258 11053494 YP_004787155.1 CDS Murru_0683 NC_015945.1 727930 728406 R PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle; COGs: COG0049 Ribosomal protein S7; InterPro IPR000235:IPR005717; KEGG: gfo:GFO_2842 30S ribosomal protein S7; PFAM: Ribosomal protein S7; SPTR: 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; 30S ribosomal protein S7 complement(727930..728406) Muricauda ruestringensis DSM 13258 11053495 YP_004787156.1 CDS Murru_0684 NC_015945.1 728426 728800 R PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle; COGs: COG0048 Ribosomal protein S12; InterPro IPR006032:IPR005679; KEGG: fbc:FB2170_02540 30S ribosomal protein S12; PFAM: Ribosomal protein S12/S23; SPTR: 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacteria; 30S ribosomal protein S12 complement(728426..728800) Muricauda ruestringensis DSM 13258 11053496 YP_004787157.1 CDS Murru_0685 NC_015945.1 729295 732519 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: rbi:RB2501_09830 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein probably involved in nutrient binding; TonB-dependent receptor plug 729295..732519 Muricauda ruestringensis DSM 13258 11053497 YP_004787158.1 CDS Murru_0686 NC_015945.1 732541 734265 D KEGG: rbi:RB2501_09825 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 732541..734265 Muricauda ruestringensis DSM 13258 11053498 YP_004787159.1 CDS Murru_0687 NC_015945.1 734285 735169 D KEGG: zpr:ZPR_3680 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 734285..735169 Muricauda ruestringensis DSM 13258 11053499 YP_004787160.1 CDS Murru_0688 NC_015945.1 735305 736048 D KEGG: fbc:FB2170_02565 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 735305..736048 Muricauda ruestringensis DSM 13258 11053500 YP_004787161.1 CDS Murru_0689 NC_015945.1 736082 737422 D PFAM: Arylsulfotransferase (ASST); KEGG: fbc:FB2170_02560 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 736082..737422 Muricauda ruestringensis DSM 13258 11053501 YP_004787162.1 CDS Murru_0690 NC_015945.1 737514 738245 D PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; COGs: COG0566 rRNA methylase; InterPro IPR013123:IPR001537:IPR004441; KEGG: fbc:FB2170_02570 putative tRNA/rRNA methyltransferase; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SMART: RNA 2-O ribose methyltransferase, substrate binding; SPTR: Putative tRNA/rRNA methyltransferase; TIGRFAM: RNA methyltransferase TrmH, group 3; TrmH family RNA methyltransferase 737514..738245 Muricauda ruestringensis DSM 13258 11053502 YP_004787163.1 CDS Murru_0691 NC_015945.1 738242 738970 R PFAM: Rhomboid family; InterPro IPR022764; KEGG: fbc:FB2170_02575 putative transmembrane protein; PFAM: Peptidase S54, rhomboid domain; SPTR: Putative transmembrane protein; peptidase S54, rhomboid domain-containing protein complement(738242..738970) Muricauda ruestringensis DSM 13258 11053503 YP_004787164.1 CDS Murru_0692 NC_015945.1 739091 740368 D PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA); COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR003959:IPR003593; KEGG: fbc:FB2170_02580 putative AAA family ATPase protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: Putative AAA family ATPase protein; AAA ATPase 739091..740368 Muricauda ruestringensis DSM 13258 11053504 YP_004787165.1 CDS Murru_0693 NC_015945.1 740365 741183 R KEGG: fbc:FB2170_02585 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(740365..741183) Muricauda ruestringensis DSM 13258 11053505 YP_004787166.1 CDS Murru_0694 NC_015945.1 741221 742681 R KEGG: fbc:FB2170_02590 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(741221..742681) Muricauda ruestringensis DSM 13258 11053506 YP_004787167.1 CDS Murru_0695 NC_015945.1 742678 743223 R KEGG: fbc:FB2170_02595 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(742678..743223) Muricauda ruestringensis DSM 13258 11053507 YP_004787168.1 CDS Murru_0696 NC_015945.1 743281 743970 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; HAD superfamily (subfamily IA) hydrolase, TIGR02254; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834:IPR011951:IPR006439; KEGG: fbc:FB2170_02600 haloacid dehalogenase-like hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Haloacid dehalogenase-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase complement(743281..743970) Muricauda ruestringensis DSM 13258 11053508 YP_004787169.1 CDS Murru_0697 NC_015945.1 743963 745258 R KEGG: rbi:RB2501_09785 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(743963..745258) Muricauda ruestringensis DSM 13258 11053509 YP_004787170.1 CDS Murru_0698 NC_015945.1 745271 745969 R PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: fbc:FB2170_02610 putative DNA repair protein; PFAM: Uncharacterised protein family UPF0758; SPTR: Putative DNA repair protein; TIGRFAM: Uncharacterised protein family UPF0758; DNA repair protein RadC complement(745271..745969) Muricauda ruestringensis DSM 13258 11053510 YP_004787171.1 CDS Murru_0699 NC_015945.1 746023 746472 D PFAM: Protein of unknown function (DUF1569); KEGG: rbi:RB2501_09775 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 746023..746472 Muricauda ruestringensis DSM 13258 11053511 YP_004787172.1 CDS Murru_0700 NC_015945.1 746476 747369 R PFAM: Mur ligase family, catalytic domain; Mur ligase middle domain; COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; InterPro IPR000713:IPR013221; KEGG: fbc:FB2170_02620 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; PFAM: Mur ligase, N-terminal; Mur ligase, central; PRIAM: UDP-N-acetylmuramate--L-alanine ligase; SPTR:UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl -meso-diaminopimelateligase; UDP-N-acetylmuramate--L-alanine ligase complement(746476..747369) Muricauda ruestringensis DSM 13258 11053512 YP_004787173.1 CDS Murru_0701 NC_015945.1 747467 747778 D PFAM: Cupin domain; InterPro IPR013096; KEGG: rbi:RB2501_09765 putative pectin degradation protein; PFAM: Cupin 2, conserved barrel; SPTR: Possible pectin degradation protein; cupin 2 barrel domain-containing protein 747467..747778 Muricauda ruestringensis DSM 13258 11053513 YP_004787174.1 CDS Murru_0702 NC_015945.1 747782 748567 D PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: fbc:FB2170_02630 putative short-chain dehydrogenase/reductase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Putative short-chain dehydrogenase/reductase; 3-oxoacyl-ACP reductase 747782..748567 Muricauda ruestringensis DSM 13258 11053514 YP_004787175.1 CDS Murru_0703 NC_015945.1 748661 749038 D PFAM: DoxX; InterPro IPR011637; KEGG: fbc:FB2170_02640 hypothetical protein; PFAM: Uncharacterised protein family YphA; SPTR: Putative uncharacterized protein; DoxX family protein 748661..749038 Muricauda ruestringensis DSM 13258 11053515 YP_004787176.1 CDS Murru_0704 NC_015945.1 749102 749827 R PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: zpr:ZPR_4679 two-component system regulatory protein; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Two-component system regulatory protein; LytTR family two component transcriptional regulator complement(749102..749827) Muricauda ruestringensis DSM 13258 11053516 YP_004787177.1 CDS Murru_0705 NC_015945.1 749824 750882 R PFAM: Histidine kinase; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559:IPR003594; KEGG: zpr:ZPR_4680 DEAD/DEAH box helicase-like protein; PFAM: Signal transduction histidine kinase, internal region; ATPase-like, ATP-binding domain; SPTR: DEAD/DEAH box helicase-like protein; putative signal transduction histidine kinase complement(749824..750882) Muricauda ruestringensis DSM 13258 11053517 YP_004787178.1 CDS Murru_0706 NC_015945.1 751384 751908 R KEGG: fbc:FB2170_02645 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(751384..751908) Muricauda ruestringensis DSM 13258 11053518 YP_004787179.1 CDS Murru_0707 NC_015945.1 751974 752975 R PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; COGs: COG0536 GTPase; HAMAP: GTP-binding protein Obg/CgtA; InterPro IPR006169:IPR002917:IPR014100; KEGG: fbc:FB2170_02650 putative Spo0B-related GTP-binding protein; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related; SPTR: GTPase obg; TIGRFAM: GTP-binding protein Obg/CgtA; GTPase ObgE complement(751974..752975) Muricauda ruestringensis DSM 13258 11053519 YP_004787180.1 CDS Murru_0708 NC_015945.1 753010 754116 R PFAM: Phosphoribosyl transferase domain; Adenylate kinase; TIGRFAM: hypoxanthine phosphoribosyltransferase; COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; HAMAP: Adenylate kinase; InterPro IPR000836:IPR000850:IPR005904:IPR006259; KEGG: fbc:FB2170_02655 adenylate kinase; PFAM: Adenylate kinase; Phosphoribosyltransferase; PRIAM: Hypoxanthine phosphoribosyltransferase., Adenylate kinase; SPTR: Adenylate kinase; TIGRFAM: Adenylate kinase, subfamily; Hypoxanthine phosphoribosyl transferase; adenylate kinase complement(753010..754116) Muricauda ruestringensis DSM 13258 11053520 YP_004787181.1 CDS Murru_0709 NC_015945.1 754234 755388 D PFAM: ATP-grasp domain; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurK protein; COGs: COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase); InterPro IPR003135:IPR005875; KEGG: fbc:FB2170_02660 phosphoribosylaminoimidazole carboxylase; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type; PRIAM: Phosphoribosylaminoimidazole carboxylase; SPTR: Phosphoribosylaminoimidazole carboxylase; TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; phosphoribosylaminoimidazole carboxylase ATPase subunit 754234..755388 Muricauda ruestringensis DSM 13258 11053521 YP_004787182.1 CDS Murru_0710 NC_015945.1 755392 755883 D PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein; COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; InterPro IPR000031; KEGG: fbc:FB2170_02665 phosphoribosylaminoimidazole carboxylase catalytic subunit; PFAM: Phosphoribosylaminoimidazole carboxylase, core; PRIAM: Phosphoribosylaminoimidazole carboxylase; SPTR: Phosphoribosylaminoimidazole carboxylase catalytic subunit; TIGRFAM: Phosphoribosylaminoimidazole carboxylase, core; phosphoribosylaminoimidazole carboxylase catalytic subunit 755392..755883 Muricauda ruestringensis DSM 13258 11053522 YP_004787183.1 CDS Murru_0711 NC_015945.1 755907 756299 D hypothetical protein 755907..756299 Muricauda ruestringensis DSM 13258 11053523 YP_004787184.1 CDS Murru_0712 NC_015945.1 756305 758326 D PFAM: Peptidase family M3; COGs: COG0339 Zn-dependent oligopeptidase; InterPro IPR001567; KEGG: fbc:FB2170_02670 putative peptidyl-dipeptidase; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; PRIAM: Oligopeptidase A; SPTR: Putative peptidyl-dipeptidase; oligopeptidase A 756305..758326 Muricauda ruestringensis DSM 13258 11053524 YP_004787185.1 CDS Murru_0713 NC_015945.1 758476 760335 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR013767:IPR013655:IPR003594:IPR000014:IPR 001610; KEGG: chu:CHU_3217 two-component sensor histidine kinase; PFAM: PAS fold-3; PAS fold; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; PAC motif; PAS; SPTR: Two-component sensor histidine kinase; TIGRFAM: PAS; PAS/PAC sensor signal transduction histidine kinase 758476..760335 Muricauda ruestringensis DSM 13258 11053525 YP_004787186.1 CDS Murru_0714 NC_015945.1 760348 760746 D PFAM: Response regulator receiver domain; InterPro IPR001789; KEGG: cpi:Cpin_5595 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Response regulator receiver protein; response regulator receiver 760348..760746 Muricauda ruestringensis DSM 13258 11053526 YP_004787187.1 CDS Murru_0715 NC_015945.1 760959 761513 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma-70 factor, TIGR02943 family; RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: fbc:FB2170_02680 RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 760959..761513 Muricauda ruestringensis DSM 13258 11053527 YP_004787188.1 CDS Murru_0716 NC_015945.1 761516 761746 D KEGG: fbc:FB2170_02685 glycine dehydrogenase; SPTR: Glycine dehydrogenase; glycine dehydrogenase 761516..761746 Muricauda ruestringensis DSM 13258 11053528 YP_004787189.1 CDS Murru_0717 NC_015945.1 761743 762567 R KEGG: fbc:FB2170_02690 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(761743..762567) Muricauda ruestringensis DSM 13258 11053529 YP_004787190.1 CDS Murru_0718 NC_015945.1 762588 765545 D PFAM: Glycine cleavage system P-protein; TIGRFAM: glycine dehydrogenase (decarboxylating); COGs: COG1003 Glycine cleavage system protein P (pyridoxal-binding) C-terminal domain; HAMAP: Glycine cleavage system P protein, homodimeric; InterPro IPR020580:IPR003437; KEGG: fbc:FB2170_02695 glycine dehydrogenase; PFAM: Glycine cleavage system P-protein, N-terminal; SPTR: Glycine dehydrogenase [decarboxylating]; TIGRFAM: Glycine cleavage system P protein, homodimeric; glycine dehydrogenase 762588..765545 Muricauda ruestringensis DSM 13258 11053530 YP_004787191.1 CDS Murru_0719 NC_015945.1 765714 766772 D PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); InterPro IPR013751:IPR013747; KEGG: fbc:FB2170_02700 3-oxoacyl-(acyl carrier protein) synthase; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase III; SPTR: 3-oxoacyl-(Acyl carrier protein) synthase; beta-ketoacyl-acyl-carrier-protein synthase III 765714..766772 Muricauda ruestringensis DSM 13258 11053531 YP_004787192.1 CDS Murru_0720 NC_015945.1 767479 768003 D KEGG: fbc:FB2170_02705 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 767479..768003 Muricauda ruestringensis DSM 13258 11053532 YP_004787193.1 CDS Murru_0721 NC_015945.1 768189 769034 D PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: gfo:GFO_2879 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2; family 2 glycosyl transferase 768189..769034 Muricauda ruestringensis DSM 13258 11053533 YP_004787194.1 CDS Murru_0722 NC_015945.1 769181 769930 D KEGG: fnu:FN0653 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 769181..769930 Muricauda ruestringensis DSM 13258 11053534 YP_004787195.1 CDS Murru_0723 NC_015945.1 770081 770848 D KEGG: fnu:FN0653 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 770081..770848 Muricauda ruestringensis DSM 13258 11053535 YP_004787196.1 CDS Murru_0724 NC_015945.1 770958 771872 D PFAM: Tetratricopeptide repeat; InterPro IPR001440:IPR013105:IPR019734; KEGG: cyc:PCC7424_1361 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: TPR repeat-containing protein; hypothetical protein 770958..771872 Muricauda ruestringensis DSM 13258 11053536 YP_004787197.1 CDS Murru_0725 NC_015945.1 771885 773555 R PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; InterPro IPR002591; KEGG: fbc:FB2170_17301 putative alkaline phosphatase; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR: Putative alkaline phosphatase; type I phosphodiesterase/nucleotide pyrophosphatase complement(771885..773555) Muricauda ruestringensis DSM 13258 11053537 YP_004787198.1 CDS Murru_0726 NC_015945.1 773625 774410 D PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: rbi:RB2501_09685 hypothetical protein; PFAM: Domain of unknown function DUF140; SPTR: Putative uncharacterized protein; hypothetical protein 773625..774410 Muricauda ruestringensis DSM 13258 11053538 YP_004787199.1 CDS Murru_0727 NC_015945.1 774410 775177 D PFAM: ABC transporter; COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003439:IPR003593; KEGG: fbc:FB2170_17311 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; Fe(3+)-transporting ATPase 774410..775177 Muricauda ruestringensis DSM 13258 11053539 YP_004787200.1 CDS Murru_0728 NC_015945.1 775522 776979 R PFAM: Domain of unknown function (DUF389); TIGRFAM: uncharacterized hydrophobic domain; COGs: COG1808 membrane protein; InterPro IPR005240; KEGG: rbi:RB2501_09675 putative integral membrane protein; PFAM: Protein of unknown function DUF389; SPTR: Putative integral membrane protein; hypothetical protein complement(775522..776979) Muricauda ruestringensis DSM 13258 11053540 YP_004787201.1 CDS Murru_0729 NC_015945.1 776983 778062 R PFAM: Nucleotidyl transferase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR005835; KEGG: fbc:FB2170_17321 putative mannose-1-phosphate guanylyltransferase; PFAM: Nucleotidyl transferase; PRIAM: Mannose-1-phosphate guanylyltransferase; SPTR: Putative mannose-1-phosphate guanylyltransferase; mannose-1-phosphate guanylyltransferase complement(776983..778062) Muricauda ruestringensis DSM 13258 11053541 YP_004787202.1 CDS Murru_0730 NC_015945.1 778174 778773 R PFAM: SprT-like family; KEGG: fbc:FB2170_17326 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(778174..778773) Muricauda ruestringensis DSM 13258 11053542 YP_004787203.1 CDS Murru_0731 NC_015945.1 778821 779498 R PFAM: short chain dehydrogenase; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: fbc:FB2170_17351 short-chain dehydrogenase/reductase family oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Oxidoreductase, short-chain dehydrogenase/reductase family protein; short-chain dehydrogenase/reductase SDR complement(778821..779498) Muricauda ruestringensis DSM 13258 11053543 YP_004787204.1 CDS Murru_0732 NC_015945.1 779591 780580 R PFAM: Peptidase family M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: fbc:FB2170_17356 putative peptidase, M28 family protein; PFAM: Peptidase M28; SPTR: Putative peptidase, M28 family protein; peptidase M28 complement(779591..780580) Muricauda ruestringensis DSM 13258 11053544 YP_004787205.1 CDS Murru_0733 NC_015945.1 780692 782326 R PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form; COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089:IPR004167:IPR001078:IPR006257; KEGG: fbc:FB2170_17361 dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; SPTR: Dihydrolipoyllysine-residue acetyltransferase component of pyruvatedehydrogenase complex; TIGRFAM: Dihydrolipoamide acetyltransferase, long form; pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase complement(780692..782326) Muricauda ruestringensis DSM 13258 11053545 YP_004787206.1 CDS Murru_0734 NC_015945.1 782331 783329 R PFAM: Dehydrogenase E1 component; TIGRFAM: pyruvate dehydrogenase E1 component, alpha subunit; COGs: COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type alpha subunit; InterPro IPR001017:IPR017597; KEGG: rbi:RB2501_09640 pyruvate dehydrogenase E1 component subunit alpha; PFAM: Dehydrogenase, E1 component; PRIAM: Pyruvate dehydrogenase (acetyl-transferring); SPTR: Pyruvate dehydrogenase E1 component, alpha subunit; TIGRFAM: Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y; pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha complement(782331..783329) Muricauda ruestringensis DSM 13258 11053546 YP_004787207.1 CDS Murru_0735 NC_015945.1 783411 783902 R PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: cytidine deaminase, homotetrameric; COGs: COG0295 Cytidine deaminase; InterPro IPR002125:IPR006262; KEGG: fbc:FB2170_17371 cytidine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: Cytidine deaminase; TIGRFAM: Cytidine deaminase, homotetrameric; cytidine deaminase complement(783411..783902) Muricauda ruestringensis DSM 13258 11053547 YP_004787208.1 CDS Murru_0736 NC_015945.1 783977 785122 R KEGG: fbc:FB2170_17381 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(783977..785122) Muricauda ruestringensis DSM 13258 11053548 YP_004787209.1 CDS Murru_0737 NC_015945.1 785517 787166 D PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldJ; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532:IPR019865; KEGG: fbc:FB2170_17391 lipoprotein; PFAM: Sulphatase-modifying factor; SPTR: Lipoprotein, putative; TIGRFAM: Gliding motility-associated lipoprotein GldJ; gliding motility-associated lipoprotein GldJ 785517..787166 Muricauda ruestringensis DSM 13258 11053549 YP_004787210.1 CDS Murru_0738 NC_015945.1 787239 788507 D PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase; InterPro IPR000713:IPR013221:IPR004101:IPR005863; KEGG: fbc:FB2170_17396 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate- D-alanyl-D -alanyl ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; PRIAM:UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-a lanineligase; SPTR:UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-al anineligase; TIGRFAM: UDP-MurNAc-pentapeptide synthetase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6- diaminopimelate--D-alanyl-D-alanyl ligase 787239..788507 Muricauda ruestringensis DSM 13258 11053550 YP_004787211.1 CDS Murru_0739 NC_015945.1 788528 788767 R PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: chu:CHU_2935 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; helix-turn-helix domain-containing protein complement(788528..788767) Muricauda ruestringensis DSM 13258 11053551 YP_004787212.1 CDS Murru_0740 NC_015945.1 788897 789058 D hypothetical protein 788897..789058 Muricauda ruestringensis DSM 13258 11053552 YP_004787213.1 CDS Murru_0741 NC_015945.1 789167 789580 R PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: 6-pyruvoyl tetrahydropterin synthase/QueD family protein; COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: dfe:Dfer_0467 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; PFAM: 6-pyruvoyl tetrahydropterin synthase-related; SPTR: Putative uncharacterized protein; hypothetical protein complement(789167..789580) Muricauda ruestringensis DSM 13258 11053554 YP_004787214.1 CDS Murru_0742 NC_015945.1 789750 790433 D PFAM: Metallo-beta-lactamase superfamily; COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; HAMAP: Uncharacterised protein family UPF0173, metal-dependent hydrolase; InterPro IPR001279:IPR022877; KEGG: gfo:GFO_2312 metallo-beta-lactamase domain-containing protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: UPF0173 metal-dependent hydrolase M23134_04293; metal-dependent hydrolase 789750..790433 Muricauda ruestringensis DSM 13258 11053555 YP_004787215.1 CDS Murru_0743 NC_015945.1 791010 792737 D KEGG: cpi:Cpin_1033 TPR repeat-containing protein; SPTR: Tetratricopeptide repeat domain protein; hypothetical protein 791010..792737 Muricauda ruestringensis DSM 13258 11053556 YP_004787216.1 CDS Murru_0744 NC_015945.1 792929 793489 D KEGG: fbc:FB2170_04930 nicotinic acid mononucleotide adenyltransferase; SPTR: Nicotinic acid mononucleotide adenyltransferase; hypothetical protein 792929..793489 Muricauda ruestringensis DSM 13258 11053557 YP_004787217.1 CDS Murru_0746 NC_015945.1 793791 794174 D hypothetical protein 793791..794174 Muricauda ruestringensis DSM 13258 11053559 YP_004787218.1 CDS Murru_0747 NC_015945.1 794143 795300 R KEGG: ote:Oter_2274 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(794143..795300) Muricauda ruestringensis DSM 13258 11053560 YP_004787219.1 CDS Murru_0748 NC_015945.1 795322 798564 R PFAM: PKD domain; InterPro IPR000601; KEGG: fjo:Fjoh_1123 PKD domain-containing protein; PFAM: PKD domain; SPTR: PKD domain containing protein; PKD domain-containing protein complement(795322..798564) Muricauda ruestringensis DSM 13258 11053561 YP_004787220.1 CDS Murru_0749 NC_015945.1 798682 798978 R SPTR: Putative uncharacterized protein; hypothetical protein complement(798682..798978) Muricauda ruestringensis DSM 13258 11053562 YP_004787221.1 CDS Murru_0750 NC_015945.1 799004 799249 R SPTR: Putative uncharacterized protein; hypothetical protein complement(799004..799249) Muricauda ruestringensis DSM 13258 11053563 YP_004787222.1 CDS Murru_0751 NC_015945.1 799321 800298 R PFAM: Integrase core domain; COGs: COG2801 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: lby:Lbys_0529 integrase catalytic region; PFAM: Integrase, catalytic core; SPTR: Helix-turn-helix, Fis-type protein; integrase catalytic subunit complement(799321..800298) Muricauda ruestringensis DSM 13258 11053564 YP_004787223.1 CDS Murru_0752 NC_015945.1 800313 800660 R PFAM: Transposase; InterPro IPR002514; KEGG: mch:Mchl_5506 transposase IS3/IS911 family protein; PFAM: Transposase IS3/IS911family; SPTR: Transposase subfamily protein; transposase IS3/IS911 family protein complement(800313..800660) Muricauda ruestringensis DSM 13258 11053565 YP_004787224.1 CDS Murru_0753 NC_015945.1 800746 801042 R KEGG: pdi:BDI_2138 integrase; SPTR: Tyrosine type site-specific recombinase; integrase complement(800746..801042) Muricauda ruestringensis DSM 13258 11053566 YP_004787225.1 CDS Murru_0754 NC_015945.1 801419 802630 R PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR013221:IPR001645; KEGG: fbc:FB2170_17411 folylpolyglutamate synthase; PFAM: Mur ligase, central; PRIAM: Tetrahydrofolate synthase; SPTR: Folylpolyglutamate synthase; TIGRFAM: Folylpolyglutamate synthetase; bifunctional folylpolyglutamate synthase/dihydrofolate synthase complement(801419..802630) Muricauda ruestringensis DSM 13258 11053568 YP_004787226.1 CDS Murru_0755 NC_015945.1 802630 803514 R KEGG: fbc:FB2170_17416 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(802630..803514) Muricauda ruestringensis DSM 13258 11053569 YP_004787227.1 CDS Murru_0756 NC_015945.1 803514 803900 R PFAM: Biopolymer transport protein ExbD/TolR; COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: rbi:RB2501_09385 putative tansport related protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative tansport related protein; biopolymer transport protein ExbD/TolR complement(803514..803900) Muricauda ruestringensis DSM 13258 11053570 YP_004787228.1 CDS Murru_0757 NC_015945.1 803911 804603 R PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: fbc:FB2170_17426 putative biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Putative biopolymer transport protein; MotA/TolQ/ExbB proton channel complement(803911..804603) Muricauda ruestringensis DSM 13258 11053571 YP_004787229.1 CDS Murru_0758 NC_015945.1 804662 806050 R PFAM: Citrate transporter; COGs: COG1055 Na+/H+ antiporter NhaD and related arsenite permease; InterPro IPR004680; KEGG: rbi:RB2501_09375 putative Na+/H+ antiporter; PFAM: Divalent ion symporter; SPTR: Sodium:proton antiporter; citrate transporter complement(804662..806050) Muricauda ruestringensis DSM 13258 11053572 YP_004787230.1 CDS Murru_0759 NC_015945.1 806288 807430 D PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: fbc:FB2170_17441 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; PRIAM: Butyryl-CoA dehydrogenase; SPTR: Acyl-CoA dehydrogenase; butyryl-CoA dehydrogenase 806288..807430 Muricauda ruestringensis DSM 13258 11053573 YP_004787231.1 CDS Murru_0760 NC_015945.1 807735 812243 D PFAM: Conserved region in glutamate synthase; GXGXG motif; Glutamate synthase central domain; Glutamine amidotransferases class-II; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR000583:IPR006982:IPR002932:IPR002489; KEGG: fbc:FB2170_17446 glutamate synthase; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; PRIAM: Glutamate synthase (ferredoxin); SPTR: Glutamate synthase (Ferredoxin); glutamate synthase 807735..812243 Muricauda ruestringensis DSM 13258 11053574 YP_004787232.1 CDS Murru_0761 NC_015945.1 812252 813718 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: glutamate synthases, NADH/NADPH, small subunit; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027:IPR006005; KEGG: rbi:RB2501_09355 NADPH-dependent glutamate synthase, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Glutamate synthase (NADPH); SPTR: NADPH-dependent glutamate synthase, small subunit; TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 1; glutamate synthase NADH/NADPH small subunit 812252..813718 Muricauda ruestringensis DSM 13258 11053575 YP_004787233.1 CDS Murru_0762 NC_015945.1 813951 814892 D KEGG: rbi:RB2501_09335 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 813951..814892 Muricauda ruestringensis DSM 13258 11053576 YP_004787234.1 CDS Murru_0763 NC_015945.1 820483 822552 R KEGG: fbc:FB2170_08984 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(820483..822552) Muricauda ruestringensis DSM 13258 11053582 YP_004787235.1 CDS Murru_0764 NC_015945.1 822653 824131 R PFAM: SusD family; InterPro IPR012944; KEGG: ran:Riean_0046 hypothetical protein; PFAM: RagB/SusD; SPTR: Putative uncharacterized protein; RagB/SusD domain-containing protein complement(822653..824131) Muricauda ruestringensis DSM 13258 11053583 YP_004787236.1 CDS Murru_0765 NC_015945.1 824143 827376 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: gfo:GFO_2844 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB dependent/ligand-gated channel; TonB-dependent receptor plug complement(824143..827376) Muricauda ruestringensis DSM 13258 11053584 YP_004787237.1 CDS Murru_0766 NC_015945.1 827610 828206 D PFAM: Ribonuclease HII; COGs: COG0164 Ribonuclease HII; InterPro IPR001352; KEGG: fbc:FB2170_08979 ribonuclease HII; PFAM: Ribonuclease HII/HIII; PRIAM: Ribonuclease H; SPTR: Ribonuclease HII; ribonuclease H 827610..828206 Muricauda ruestringensis DSM 13258 11053585 YP_004787238.1 CDS Murru_0767 NC_015945.1 828236 830692 D KEGG: fbc:FB2170_08974 ribonuclease HII; SPTR: Ribonuclease HII; ribonuclease HII 828236..830692 Muricauda ruestringensis DSM 13258 11053586 YP_004787239.1 CDS Murru_0768 NC_015945.1 830816 832129 D PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: rbi:RB2501_09300 outer membrane protein-like peptidoglycan-associated (LipO)protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: Outer membrane protein-like peptidoglycan-associated (Lipo)protein; OmpA/MotB domain-containing protein 830816..832129 Muricauda ruestringensis DSM 13258 11053587 YP_004787240.1 CDS Murru_0769 NC_015945.1 832136 832828 D KEGG: fbc:FB2170_08969 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 832136..832828 Muricauda ruestringensis DSM 13258 11053588 YP_004787241.1 CDS Murru_0770 NC_015945.1 833003 833830 R KEGG: shw:Sputw3181_2134 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(833003..833830) Muricauda ruestringensis DSM 13258 11053589 YP_004787242.1 CDS Murru_0771 NC_015945.1 834244 834783 R hypothetical protein complement(834244..834783) Muricauda ruestringensis DSM 13258 11053590 YP_004787243.1 CDS Murru_0772 NC_015945.1 834854 835315 R hypothetical protein complement(834854..835315) Muricauda ruestringensis DSM 13258 11053591 YP_004787244.1 CDS Murru_0773 NC_015945.1 835393 836022 R KEGG: fps:FP2138 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(835393..836022) Muricauda ruestringensis DSM 13258 11053592 YP_004787245.1 CDS Murru_0774 NC_015945.1 836052 836198 D hypothetical protein 836052..836198 Muricauda ruestringensis DSM 13258 11053593 YP_004787246.1 CDS Murru_0775 NC_015945.1 836441 837127 R KEGG: mtt:Ftrac_3797 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(836441..837127) Muricauda ruestringensis DSM 13258 11053594 YP_004787247.1 CDS Murru_0776 NC_015945.1 837277 837993 R PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: lipoate-protein ligase B; COGs: COG0321 Lipoate-protein ligase B; HAMAP: Octanoyltransferase; InterPro IPR004143:IPR000544; KEGG: fbc:FB2170_08964 lipoate-protein ligase B; PFAM: Biotin/lipoate A/B protein ligase; PRIAM: Lipoyl(octanoyl) transferase; SPTR: Octanoyltransferase; TIGRFAM: Octanoyltransferase; Octanoyltransferase complement(837277..837993) Muricauda ruestringensis DSM 13258 11053595 YP_004787248.1 CDS Murru_0777 NC_015945.1 838026 838763 R KEGG: fbc:FB2170_08959 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(838026..838763) Muricauda ruestringensis DSM 13258 11053596 YP_004787249.1 CDS Murru_0778 NC_015945.1 838771 838926 R PFAM: Uncharacterized protein family UPF0057; KEGG: cat:CA2559_05515 hypothetical protein; SPTR: Ric1 protein; manually curated; hypothetical protein complement(838771..838926) Muricauda ruestringensis DSM 13258 11053597 YP_004787250.1 CDS Murru_0779 NC_015945.1 839020 840063 D PFAM: Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792; KEGG: bmd:BMD_1419 two-component response regulator LiaR; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: DNA-binding response regulator; LuxR family transcriptional regulator 839020..840063 Muricauda ruestringensis DSM 13258 11053598 YP_004787251.1 CDS Murru_0780 NC_015945.1 840163 840705 D PFAM: Thioredoxin; InterPro IPR013766; KEGG: fbc:FB2170_05425 hypothetical protein; PFAM: Thioredoxin domain; SPTR: Putative uncharacterized protein; thioredoxin domain-containing protein 840163..840705 Muricauda ruestringensis DSM 13258 11053599 YP_004787252.1 CDS Murru_0781 NC_015945.1 840771 842462 D PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase, class II; InterPro IPR004365:IPR004364:IPR002313; KEGG: fbc:FB2170_08944 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; PRIAM: Lysine--tRNA ligase; SPTR: Lysyl-tRNA synthetase; TIGRFAM: Lysyl-tRNA synthetase, class II; lysyl-tRNA synthetase 840771..842462 Muricauda ruestringensis DSM 13258 11053600 YP_004787253.1 CDS Murru_0782 NC_015945.1 842622 845711 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: ran:Riean_1607 TonB-dependent receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Ferric enterobactin receptor; TonB-dependent receptor plug 842622..845711 Muricauda ruestringensis DSM 13258 11053601 YP_004787254.1 CDS Murru_0783 NC_015945.1 845922 847352 D PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: fbc:FB2170_08919 anion transporter; PFAM: Sodium/sulphate symporter; SPTR: Anion transporter; TIGRFAM: Sodium/sulphate symporter; anion transporter 845922..847352 Muricauda ruestringensis DSM 13258 11053602 YP_004787255.1 CDS Murru_0784 NC_015945.1 847515 847628 R hypothetical protein complement(847515..847628) Muricauda ruestringensis DSM 13258 11053603 YP_004787256.1 CDS Murru_0785 NC_015945.1 847798 848520 R KEGG: fbc:FB2170_15618 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(847798..848520) Muricauda ruestringensis DSM 13258 11053604 YP_004787257.1 CDS Murru_0786 NC_015945.1 848787 851288 D KEGG: cat:CA2559_05500 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 848787..851288 Muricauda ruestringensis DSM 13258 11053605 YP_004787258.1 CDS Murru_0787 NC_015945.1 851450 851644 D hypothetical protein 851450..851644 Muricauda ruestringensis DSM 13258 11053606 YP_004787259.1 CDS Murru_0788 NC_015945.1 852256 852855 D KEGG: kko:Kkor_1792 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 852256..852855 Muricauda ruestringensis DSM 13258 11053607 YP_004787260.1 CDS Murru_0789 NC_015945.1 852852 853577 D PFAM: Protein of unknown function (DUF3307); KEGG: mtt:Ftrac_1036 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 852852..853577 Muricauda ruestringensis DSM 13258 11053608 YP_004787261.1 CDS Murru_0790 NC_015945.1 853764 854318 R PFAM: FMN-binding domain; InterPro IPR007329; KEGG: fbc:FB2170_00970 FMN-binding protein; PFAM: FMN-binding; SMART: FMN-binding; SPTR: FMN-binding protein; FMN-binding domain-containing protein complement(853764..854318) Muricauda ruestringensis DSM 13258 11053609 YP_004787262.1 CDS Murru_0791 NC_015945.1 854302 855228 R KEGG: rbi:RB2501_09440 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(854302..855228) Muricauda ruestringensis DSM 13258 11053610 YP_004787263.1 CDS Murru_0792 NC_015945.1 855334 857499 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: zpr:ZPR_0402 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent outer membrane receptor; TonB-dependent receptor plug 855334..857499 Muricauda ruestringensis DSM 13258 11053611 YP_004787264.1 CDS Murru_0793 NC_015945.1 857505 859031 D KEGG: zpr:ZPR_0403 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 857505..859031 Muricauda ruestringensis DSM 13258 11053612 YP_004787265.1 CDS Murru_0794 NC_015945.1 859450 859845 D PFAM: ArsC family; KEGG: rbi:RB2501_14744 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 859450..859845 Muricauda ruestringensis DSM 13258 11053613 YP_004787266.1 CDS Murru_0795 NC_015945.1 860121 860252 D KEGG: pmz:HMPREF0659_A7232 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 860121..860252 Muricauda ruestringensis DSM 13258 11053614 YP_004787267.1 CDS Murru_0796 NC_015945.1 860332 860943 D KEGG: mmh:Mmah_0474 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 860332..860943 Muricauda ruestringensis DSM 13258 11053615 YP_004787268.1 CDS Murru_0797 NC_015945.1 861082 861291 R hypothetical protein complement(861082..861291) Muricauda ruestringensis DSM 13258 11053616 YP_004787269.1 CDS Murru_0798 NC_015945.1 861451 861645 D PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: cpi:Cpin_2560 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; helix-turn-helix domain-containing protein 861451..861645 Muricauda ruestringensis DSM 13258 11053617 YP_004787270.1 CDS Murru_0799 NC_015945.1 861912 862232 R KEGG: fbc:FB2170_03415 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(861912..862232) Muricauda ruestringensis DSM 13258 11053618 YP_004787271.1 CDS Murru_0800 NC_015945.1 862484 863761 R PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; HAMAP: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; InterPro IPR005814:IPR004639; KEGG: fbc:FB2170_08894 glutamate-1-semialdehyde 2,1-aminomutase; PFAM: Aminotransferase class-III; PRIAM: Glutamate-1-semialdehyde 2,1-aminomutase; SPTR: Glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; glutamate-1-semialdehyde 2,1-aminomutase complement(862484..863761) Muricauda ruestringensis DSM 13258 11053619 YP_004787272.1 CDS Murru_0801 NC_015945.1 864571 865419 R PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase; LysM domain; COGs: COG1705 Muramidase (flagellum-specific); InterPro IPR002901:IPR018392:IPR013338:IPR002482; KEGG: fbc:FB2170_08889 hemagglutinin; PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Peptidoglycan-binding lysin domain; SMART: Lysozyme domain, subfamily 2; Peptidoglycan-binding Lysin subgroup; SPTR: Hemagglutinin; mannosyl-glycoprotein endo-beta-N-acetylglucosamidase complement(864571..865419) Muricauda ruestringensis DSM 13258 11053620 YP_004787273.1 CDS Murru_0802 NC_015945.1 865416 866321 R PFAM: Pyridoxal-phosphate dependent enzyme; COGs: COG2515 1-aminocyclopropane-1-carboxylate deaminase; KEGG: fjo:Fjoh_1912 1-aminocyclopropane-1-carboxylate deaminase-like protein; PRIAM: 1-aminocyclopropane-1-carboxylate deaminase; SPTR: 1-aminocyclopropane-1-carboxylate deaminase-like protein; 1-aminocyclopropane-1-carboxylate deaminase complement(865416..866321) Muricauda ruestringensis DSM 13258 11053621 YP_004787274.1 CDS Murru_0803 NC_015945.1 866426 866737 D KEGG: fjo:Fjoh_1222 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 866426..866737 Muricauda ruestringensis DSM 13258 11053622 YP_004787275.1 CDS Murru_0804 NC_015945.1 866734 867033 D PFAM: Plasmid stabilisation system protein; KEGG: gfo:GFO_0929 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 866734..867033 Muricauda ruestringensis DSM 13258 11053623 YP_004787276.1 CDS Murru_0805 NC_015945.1 867068 867397 R KEGG: fbc:FB2170_08879 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(867068..867397) Muricauda ruestringensis DSM 13258 11053624 YP_004787277.1 CDS Murru_0806 NC_015945.1 867631 867792 D KEGG: gfo:GFO_0236 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 867631..867792 Muricauda ruestringensis DSM 13258 11053625 YP_004787278.1 CDS Murru_0807 NC_015945.1 867853 868422 D KEGG: fbc:FB2170_08869 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 867853..868422 Muricauda ruestringensis DSM 13258 11053626 YP_004787279.1 CDS Murru_0808 NC_015945.1 868639 870390 D PFAM: Biopterin-dependent aromatic amino acid hydroxylase; COGs: COG3186 Phenylalanine-4-hydroxylase; InterPro IPR019774; KEGG: rbi:RB2501_09225 phenylalanine 4-monooxygenase; PFAM: Aromatic amino acid hydroxylase, C-terminal; PRIAM: Phenylalanine 4-monooxygenase; SPTR: Putative uncharacterized protein; phenylalanine 4-monooxygenase 868639..870390 Muricauda ruestringensis DSM 13258 11053627 YP_004787280.1 CDS Murru_0809 NC_015945.1 870405 871019 R KEGG: rbi:RB2501_09215 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(870405..871019) Muricauda ruestringensis DSM 13258 11053628 YP_004787281.1 CDS Murru_0810 NC_015945.1 871016 871987 R PFAM: GSCFA family; InterPro IPR014982; KEGG: fbc:FB2170_08849 hypothetical protein; PFAM: GSCFA; SPTR: Putative uncharacterized protein; GSCFA domain-containing protein complement(871016..871987) Muricauda ruestringensis DSM 13258 11053629 YP_004787282.1 CDS Murru_0811 NC_015945.1 872217 874829 R PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase; COGs: COG0013 Alanyl-tRNA synthetase; InterPro IPR018164:IPR012947:IPR003156:IPR002318; KEGG: fbc:FB2170_08839 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1; SMART: Threonyl/alanyl tRNA synthetase, SAD; SPTR: Alanyl-tRNA synthetase; TIGRFAM: Alanyl-tRNA synthetase, class IIc; alanyl-tRNA synthetase complement(872217..874829) Muricauda ruestringensis DSM 13258 11053630 YP_004787283.1 CDS Murru_0812 NC_015945.1 874933 875910 D PFAM: Peptidase family M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: fbc:FB2170_08834 putative peptidase; PFAM: Peptidase M23; SPTR: Putative peptidase; peptidase M23 874933..875910 Muricauda ruestringensis DSM 13258 11053631 YP_004787284.1 CDS Murru_0813 NC_015945.1 875910 876239 D PFAM: MerR family regulatory protein; InterPro IPR000551; KEGG: fbc:FB2170_08829 putative transcriptional regulator protein; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; SPTR: Putative transcriptional regulator protein; regulatory protein MerR 875910..876239 Muricauda ruestringensis DSM 13258 11053632 YP_004787285.1 CDS Murru_0814 NC_015945.1 876259 876858 D PFAM: LemA family; COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: cat:CA2559_04770 hypothetical protein; PFAM: LemA; SPTR: Putative uncharacterized protein; LemA family protein 876259..876858 Muricauda ruestringensis DSM 13258 11053633 YP_004787286.1 CDS Murru_0815 NC_015945.1 876862 877299 D PFAM: Domain of unknown function (DUF477); COGs: COG3762 membrane protein; InterPro IPR007621; KEGG: fbc:FB2170_08819 hypothetical protein; PFAM: Protein of unknown function DUF477; SPTR: Putative uncharacterized protein; hypothetical protein 876862..877299 Muricauda ruestringensis DSM 13258 11053634 YP_004787287.1 CDS Murru_0816 NC_015945.1 877301 878068 D PFAM: Domain of unknown function (DUF477); COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: fbc:FB2170_08814 hypothetical protein; PFAM: Protein of unknown function DUF477; SPTR: Putative uncharacterized protein; hypothetical protein 877301..878068 Muricauda ruestringensis DSM 13258 11053635 YP_004787288.1 CDS Murru_0817 NC_015945.1 878121 878600 D hypothetical protein 878121..878600 Muricauda ruestringensis DSM 13258 11053636 YP_004787289.1 CDS Murru_0818 NC_015945.1 878814 884375 D PFAM: Alpha-macro-globulin thiol-ester bond-forming region; MG2 domain; Alpha-2-macroglobulin family; Alpha-2-macroglobulin family N-terminal region; Alpha-2-macroglobulin MG1 domain; COGs: COG2373 Large extracellular alpha-helical protein; InterPro IPR002890:IPR011625; KEGG: fbc:FB2170_06835 putative outer membrane protein; PFAM: Alpha-2-macroglobulin, N-terminal; Alpha-2-macroglobulin, N-terminal 2; SPTR: Putative outer membrane protein; alpha-2-macroglobulin domain-containing protein 878814..884375 Muricauda ruestringensis DSM 13258 11053637 YP_004787290.1 CDS Murru_0819 NC_015945.1 884335 886758 D PFAM: Penicillin-Binding Protein C-terminus Family; Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein 1C; COGs: COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC; InterPro IPR001264:IPR001460:IPR009647:IPR011815; KEGG: fbc:FB2170_06870 putative penicillin-binding protein; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; Penicillin-binding, C-terminal; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Putative penicillin-binding protein; TIGRFAM: Penicillin-binding protein 1C; penicillin-binding protein 1C 884335..886758 Muricauda ruestringensis DSM 13258 11053638 YP_004787291.1 CDS Murru_0820 NC_015945.1 886831 887595 D COGs: COG3440 restriction endonuclease; KEGG: dly:Dehly_1381 putative restriction endonuclease; SPTR: Putative restriction endonuclease; putative restriction endonuclease 886831..887595 Muricauda ruestringensis DSM 13258 11053639 YP_004787292.1 CDS Murru_0822 NC_015945.1 887835 889136 R PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain; COGs: COG1160 GTPase; HAMAP: GTP-binding, EngA; InterPro IPR002917:IPR005225:IPR016484; KEGG: fbc:FB2170_08809 GTP-binding protein EngA; PFAM: GTP-binding protein, HSR1-related; SPTR: GTP-binding protein engA; TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; GTP-binding protein engA complement(887835..889136) Muricauda ruestringensis DSM 13258 11053641 YP_004787293.1 CDS Murru_0823 NC_015945.1 889213 889728 D KEGG: fbc:FB2170_08804 GTP-binding protein EngA; SPTR: GTP-binding protein EngA; hypothetical protein 889213..889728 Muricauda ruestringensis DSM 13258 11053642 YP_004787294.1 CDS Murru_0824 NC_015945.1 889725 890606 R PFAM: GTPase of unknown function; KH domain; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain; COGs: COG1159 GTPase; HAMAP: GTP-binding protein Era; InterPro IPR002917:IPR004044:IPR005225:IPR005662; KEGG: fbc:FB2170_08799 putative GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2; SPTR: GTP-binding protein era homolog; TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; GTP-binding protein Era-like-protein complement(889725..890606) Muricauda ruestringensis DSM 13258 11053643 YP_004787295.1 CDS Murru_0825 NC_015945.1 890596 891960 R PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein; COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: rbi:RB2501_09165 sodium/alanine symporter; PFAM: Sodium:alanine symporter; SPTR: Sodium/alanine symporter; TIGRFAM: Sodium:alanine symporter; amino acid carrier protein complement(890596..891960) Muricauda ruestringensis DSM 13258 11053644 YP_004787296.1 CDS Murru_0826 NC_015945.1 892432 893952 D COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: rbi:RB2501_11087 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family protein; AraC family transcriptional regulator 892432..893952 Muricauda ruestringensis DSM 13258 11053646 YP_004787297.1 CDS Murru_0828 NC_015945.1 894876 898118 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_02545 putative outer membrane protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein, probably involved in nutrient binding; TonB-dependent receptor plug 894876..898118 Muricauda ruestringensis DSM 13258 11053648 YP_004787298.1 CDS Murru_0829 NC_015945.1 898149 899864 D PFAM: SusD family; KEGG: fbc:FB2170_02550 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 898149..899864 Muricauda ruestringensis DSM 13258 11053649 YP_004787299.1 CDS Murru_0830 NC_015945.1 899888 900688 D KEGG: fbc:FB2170_01262 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 899888..900688 Muricauda ruestringensis DSM 13258 11053650 YP_004787300.1 CDS Murru_0831 NC_015945.1 900858 901142 R hypothetical protein complement(900858..901142) Muricauda ruestringensis DSM 13258 11053651 YP_004787301.1 CDS Murru_0832 NC_015945.1 901189 902385 D PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: gfo:GFO_0750 major facilitator superfamily permease arabinose polymer transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily permease-possibly arabinose polymer transporter; major facilitator superfamily protein 901189..902385 Muricauda ruestringensis DSM 13258 11053652 YP_004787302.1 CDS Murru_0833 NC_015945.1 902477 903304 D PFAM: Glycosyl hydrolases family 16; Putative secretory protein (DUF2401); COGs: COG2273 Beta-glucanase/Beta-glucan synthetase; InterPro IPR000757; KEGG: fbc:FB2170_09211 beta-glucanase; PFAM: Glycoside hydrolase, family 16; PRIAM: Glucan endo-1,3-beta-D-glucosidase; SPTR: Beta-glucanase; glucan endo-1,3-beta-D-glucosidase 902477..903304 Muricauda ruestringensis DSM 13258 11053653 YP_004787303.1 CDS Murru_0834 NC_015945.1 903345 903527 R KEGG: zpr:ZPR_4140 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(903345..903527) Muricauda ruestringensis DSM 13258 11053654 YP_004787304.1 CDS Murru_0835 NC_015945.1 903531 904856 R PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fbc:FB2170_08734 putative outer membrane protein; PFAM: Outer membrane efflux protein; SPTR: Putative outer membrane protein TolC; outer membrane efflux protein complement(903531..904856) Muricauda ruestringensis DSM 13258 11053655 YP_004787305.1 CDS Murru_0836 NC_015945.1 904856 908149 R PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: fbc:FB2170_08729 RND family efflux transporter; PFAM: Acriflavin resistance protein; SPTR: RND family efflux transporter; acriflavin resistance protein complement(904856..908149) Muricauda ruestringensis DSM 13258 11053656 YP_004787306.1 CDS Murru_0837 NC_015945.1 908161 909282 R COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fbc:FB2170_08724 secretion protein HlyD; SPTR: Secretion protein HlyD; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(908161..909282) Muricauda ruestringensis DSM 13258 11053657 YP_004787307.1 CDS Murru_0838 NC_015945.1 909431 910318 R PFAM: Leucine Rich Repeat; InterPro IPR001611:IPR003591; KEGG: fbc:FB2170_08714 hypothetical protein; PFAM: Leucine-rich repeat; SPTR: Putative uncharacterized protein; hypothetical protein complement(909431..910318) Muricauda ruestringensis DSM 13258 11053658 YP_004787308.1 CDS Murru_0839 NC_015945.1 910454 912367 R PFAM: ABC transporter; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439:IPR003593; KEGG: fbc:FB2170_08709 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; ABC transporter-like protein complement(910454..912367) Muricauda ruestringensis DSM 13258 11053659 YP_004787309.1 CDS Murru_0840 NC_015945.1 912433 912834 D KEGG: fbc:FB2170_08704 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 912433..912834 Muricauda ruestringensis DSM 13258 11053660 YP_004787310.1 CDS Murru_0841 NC_015945.1 912831 913886 R PFAM: FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: fbc:FB2170_08699 hypothetical protein; PFAM: FAD dependent oxidoreductase; SPTR: Putative uncharacterized protein; FAD dependent oxidoreductase complement(912831..913886) Muricauda ruestringensis DSM 13258 11053661 YP_004787311.1 CDS Murru_0842 NC_015945.1 914006 914908 R TIGRFAM: gliding motility associated protein GldN; InterPro IPR019847; KEGG: fbc:FB2170_08694 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Gliding motility associated protein GldN; gliding motility associated protein GldN complement(914006..914908) Muricauda ruestringensis DSM 13258 11053662 YP_004787312.1 CDS Murru_0843 NC_015945.1 914935 916503 R PFAM: GldM C-terminal domain; GldM N-terminal domain; TIGRFAM: gliding motility-associated protein GldM; InterPro IPR019859; KEGG: fbc:FB2170_08689 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Gliding motility-associated protein GldM; gliding motility-associated protein GldM complement(914935..916503) Muricauda ruestringensis DSM 13258 11053663 YP_004787313.1 CDS Murru_0844 NC_015945.1 916572 917228 R TIGRFAM: gliding motility-associated protein GldL; InterPro IPR019852; KEGG: rbi:RB2501_09010 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Gliding motility-associated protein, GldL; gliding motility-associated protein GldL complement(916572..917228) Muricauda ruestringensis DSM 13258 11053664 YP_004787314.1 CDS Murru_0845 NC_015945.1 917321 918700 R PFAM: Formylglycine-generating sulfatase enzyme; TIGRFAM: gliding motility-associated lipoprotein GldK; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532:IPR019866; KEGG: fbc:FB2170_08679 lipoprotein; PFAM: Sulphatase-modifying factor; SPTR: Lipoprotein, putative; TIGRFAM: Gliding motility-associated lipoprotein GldK; gliding motility-associated lipoprotein GldK complement(917321..918700) Muricauda ruestringensis DSM 13258 11053665 YP_004787315.1 CDS Murru_0846 NC_015945.1 918824 919981 R PFAM: Arginase family; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR006035; KEGG: fbc:FB2170_08674 hypothetical protein; PFAM: Ureohydrolase; SPTR: Putative uncharacterized protein; arginase/agmatinase/formiminoglutamase complement(918824..919981) Muricauda ruestringensis DSM 13258 11053666 YP_004787316.1 CDS Murru_0847 NC_015945.1 919983 922469 R PFAM: Toprim domain; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial; COGs: COG0550 Topoisomerase IA; InterProIPR006171:IPR013497:IPR005733:IPR003601:IPR 003602; KEGG: fbc:FB2170_08669 DNA topoisomerase I; PFAM: DNA topoisomerase, type IA, central; Toprim domain; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain; SPTR: DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial-type; DNA topoisomerase I complement(919983..922469) Muricauda ruestringensis DSM 13258 11053667 YP_004787317.1 CDS Murru_0848 NC_015945.1 922660 925797 D PFAM: BNR/Asp-box repeat; InterPro IPR002860; KEGG: fbc:FB2170_08664 hypothetical protein; PFAM: BNR repeat; SPTR: Putative uncharacterized protein; glycosyl hydrolase family protein 922660..925797 Muricauda ruestringensis DSM 13258 11053668 YP_004787318.1 CDS Murru_0849 NC_015945.1 925862 926590 R KEGG: cat:CA2559_00710 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(925862..926590) Muricauda ruestringensis DSM 13258 11053669 YP_004787319.1 CDS Murru_0850 NC_015945.1 926722 928185 D PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family; COGs: COG0621 2-methylthioadenine synthetase; HAMAP: tRNA-i(6)A37 modification enzyme MiaB; InterProIPR013848:IPR007197:IPR002792:IPR005839:IPR 006463:IPR006638; KEGG: zpr:ZPR_4153 tRNA-i(6)A37 modification enzyme MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: tRNA-i(6)A37 modification enzyme MiaB; TIGRFAM: Methylthiotransferase; tRNA-i(6)A37 modification enzyme MiaB; (dimethylallyl)adenosine tRNA methylthiotransferase MiaB 926722..928185 Muricauda ruestringensis DSM 13258 11053670 YP_004787320.1 CDS Murru_0851 NC_015945.1 928283 929563 D PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR002078:IPR002197:IPR003593; KEGG: fbc:FB2170_08614 transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; SPTR: Transcriptional regulator; Fis family sigma-54 specific transcriptional regulator 928283..929563 Muricauda ruestringensis DSM 13258 11053671 YP_004787321.1 CDS Murru_0852 NC_015945.1 929583 930110 D KEGG: rbi:RB2501_08975 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 929583..930110 Muricauda ruestringensis DSM 13258 11053672 YP_004787322.1 CDS Murru_0853 NC_015945.1 930117 931034 D KEGG: fbc:FB2170_08604 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 930117..931034 Muricauda ruestringensis DSM 13258 11053673 YP_004787323.1 CDS Murru_0854 NC_015945.1 931031 931393 D PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit; COGs: COG1314 Preprotein translocase subunit SecG; InterPro IPR004692; KEGG: rbi:RB2501_08965 hypothetical protein; PFAM: Preprotein translocase SecG subunit; SPTR: Putative uncharacterized protein; TIGRFAM: Preprotein translocase SecG subunit; preprotein translocase subunit SecG 931031..931393 Muricauda ruestringensis DSM 13258 11053674 YP_004787324.1 CDS Murru_0855 NC_015945.1 931540 931818 D PFAM: Chaperonin 10 Kd subunit; COGs: COG0234 Co-chaperonin GroES (HSP10); HAMAP: Chaperonin Cpn10; InterPro IPR020818; KEGG: fbc:FB2170_08594 co-chaperonin GroES; PFAM: Chaperonin Cpn10; SMART: Chaperonin Cpn10; SPTR: 10 kDa chaperonin; molecular chaperone GroES 931540..931818 Muricauda ruestringensis DSM 13258 11053675 YP_004787325.1 CDS Murru_0856 NC_015945.1 931920 933554 D PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL; COGs: COG0459 Chaperonin GroEL (HSP60 family); HAMAP: Chaperonin Cpn60; InterPro IPR002423:IPR001844; KEGG: rbi:RB2501_08955 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1; SPTR: 60 kDa chaperonin; TIGRFAM: Chaperonin Cpn60; 60 kDa chaperonin 931920..933554 Muricauda ruestringensis DSM 13258 11053676 YP_004787326.1 CDS Murru_0857 NC_015945.1 933991 935721 R PFAM: Protein of unknown function (DUF3347); TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: cat:CA2559_11703 putative cation efflux system transmembrane protein; SPTR: Putative cation efflux system transmembrane protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(933991..935721) Muricauda ruestringensis DSM 13258 11053677 YP_004787327.1 CDS Murru_0858 NC_015945.1 935726 936433 R KEGG: rbi:RB2501_00791 hypothetical protein; SPTR: Uncharacterized conserved secreted or membrane protein; hypothetical protein complement(935726..936433) Muricauda ruestringensis DSM 13258 11053678 YP_004787328.1 CDS Murru_0859 NC_015945.1 936441 938939 R PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2217 Cation transport ATPase; InterProIPR006121:IPR008250:IPR005834:IPR006403:IPR 006416:IPR001757; KEGG: cat:CA2559_11723 heavy-metal transporting P-type ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; PRIAM: Copper-exporting ATPase; SPTR: Heavy-metal transporting P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; heavy metal translocating P-type ATPase complement(936441..938939) Muricauda ruestringensis DSM 13258 11053679 YP_004787329.1 CDS Murru_0860 NC_015945.1 939011 939562 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: rbi:RB2501_00801 putative regulatory protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Putative regulatory protein; manually curated; AraC family transcriptional regulator complement(939011..939562) Muricauda ruestringensis DSM 13258 11053680 YP_004787330.1 CDS Murru_0861 NC_015945.1 939586 939912 R KEGG: gfo:GFO_1342 copper-translocating P-type ATPase; hypothetical protein complement(939586..939912) Muricauda ruestringensis DSM 13258 11053681 YP_004787331.1 CDS Murru_0862 NC_015945.1 939929 941149 R PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: cat:CA2559_11753 metal ion efflux outer membrane protein family protein, putative; PFAM: Outer membrane efflux protein; SPTR: Putative uncharacterized protein; outer membrane efflux protein complement(939929..941149) Muricauda ruestringensis DSM 13258 11053682 YP_004787332.1 CDS Murru_0863 NC_015945.1 941146 944883 R PFAM: AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 Putative silver efflux pump; InterPro IPR001036; KEGG: rbi:RB2501_04740 putative copper/silver resistance-related transport membrane protein; PFAM: Acriflavin resistance protein; SPTR: Putative copper/silver resistance-related transport membrane protein; acriflavin resistance protein complement(941146..944883) Muricauda ruestringensis DSM 13258 11053683 YP_004787333.1 CDS Murru_0864 NC_015945.1 944976 945332 R KEGG: zpr:ZPR_4261 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(944976..945332) Muricauda ruestringensis DSM 13258 11053684 YP_004787334.1 CDS Murru_0865 NC_015945.1 945500 945952 D PFAM: GAF domain; COGs: COG1956 GAF domain-containing protein; InterPro IPR003018; KEGG: fbc:FB2170_08564 hypothetical protein; PFAM: GAF; SPTR: Putative uncharacterized protein; putative GAF sensor protein 945500..945952 Muricauda ruestringensis DSM 13258 11053685 YP_004787335.1 CDS Murru_0866 NC_015945.1 946046 947575 D PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); InterPro IPR011607:IPR013982:IPR002695; KEGG: fbc:FB2170_08559 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain; PRIAM: Phosphoribosylaminoimidazolecarboxamide formyltransferase; SMART: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain; SPTR: Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; TIGRFAM: AICARFT/IMPCHase bienzyme; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 946046..947575 Muricauda ruestringensis DSM 13258 11053686 YP_004787336.1 CDS Murru_0867 NC_015945.1 947631 948659 D PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: fbc:FB2170_08554 cell shape-determining protein MreB; PFAM: Cell shape determining protein MreB/Mrl; SPTR: Cell shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; MreB/Mrl family cell shape determining protein 947631..948659 Muricauda ruestringensis DSM 13258 11053687 YP_004787337.1 CDS Murru_0868 NC_015945.1 948725 949537 D PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; COGs: COG1792 Cell shape-determining protein; InterPro IPR007221; KEGG: fbc:FB2170_08549 putative rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; SPTR: Putative rod shape-determining protein MreC; Rod shape-determining protein MreC 948725..949537 Muricauda ruestringensis DSM 13258 11053688 YP_004787338.1 CDS Murru_0869 NC_015945.1 949534 950040 D KEGG: fbc:FB2170_08544 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 949534..950040 Muricauda ruestringensis DSM 13258 11053689 YP_004787339.1 CDS Murru_0870 NC_015945.1 950095 951963 D PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311:IPR001460; KEGG: rbi:RB2501_08925 putative penicillin-binding protein 2; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Putative penicillin-binding protein 2; peptidoglycan glycosyltransferase 950095..951963 Muricauda ruestringensis DSM 13258 11053690 YP_004787340.1 CDS Murru_0871 NC_015945.1 951953 953236 D PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: fbc:FB2170_08534 rod shape-determining protein RodA; PFAM: Cell cycle protein; SPTR: Rod shape-determining protein RodA; cell cycle protein 951953..953236 Muricauda ruestringensis DSM 13258 11053691 YP_004787341.1 CDS Murru_0872 NC_015945.1 953233 954030 R PFAM: DNA/RNA non-specific endonuclease; COGs: COG1864 DNA/RNA endonuclease G NUC1; InterPro IPR001604:IPR020821; KEGG: fbc:FB2170_08529 endonuclease; PFAM: DNA/RNA non-specific endonuclease; SMART: Extracellular Endonuclease, subunit A; DNA/RNA non-specific endonuclease; SPTR: Endonuclease; DNA/RNA non-specific endonuclease complement(953233..954030) Muricauda ruestringensis DSM 13258 11053692 YP_004787342.1 CDS Murru_0873 NC_015945.1 954113 956284 R PFAM: C-terminal domain of tail specific protease (DUF3340); Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); COGs: COG0793 Periplasmic protease; InterPro IPR001478:IPR005151:IPR004447; KEGG: fbc:FB2170_08494 putative periplasmic tail-specific proteinase; PFAM: Peptidase S41; PDZ/DHR/GLGF; PRIAM: C-terminal processing peptidase; SMART: Peptidase S41; PDZ/DHR/GLGF; SPTR: Probable periplasmic tail-specific proteinase; TIGRFAM: Peptidase S41A, C-terminal peptidase; carboxyl-terminal protease complement(954113..956284) Muricauda ruestringensis DSM 13258 11053693 YP_004787343.1 CDS Murru_0874 NC_015945.1 956486 957265 D PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; COGs: COG0496 acid phosphatase; HAMAP: Survival protein SurE-like phosphatase/nucleotidase; InterPro IPR002828; KEGG: fbc:FB2170_08489 acid phosphatase; PFAM: Survival protein SurE-like phosphatase/nucleotidase; SPTR: 5'-nucleotidase surE; TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; bifunctional 5'-3'-nucleotidase/exopolyphosphatase SurE 956486..957265 Muricauda ruestringensis DSM 13258 11053694 YP_004787344.1 CDS Murru_0875 NC_015945.1 957255 957542 D KEGG: fbc:FB2170_08484 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 957255..957542 Muricauda ruestringensis DSM 13258 11053695 YP_004787345.1 CDS Murru_0876 NC_015945.1 957639 958751 D PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; COGs: COG0763 Lipid A disaccharide synthetase; InterPro IPR003835; KEGG: fbc:FB2170_08479 lipid-A-disaccharide synthase; PFAM: Glycosyl transferase, family 19; PRIAM: Lipid-A-disaccharide synthase; SPTR: Lipid-A-disaccharide synthase; TIGRFAM: Glycosyl transferase, family 19; lipid-A-disaccharide synthase 957639..958751 Muricauda ruestringensis DSM 13258 11053696 YP_004787346.1 CDS Murru_0877 NC_015945.1 958785 959342 D PFAM: NlpC/P60 family; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: fbc:FB2170_08474 hypothetical protein; PFAM: NLP/P60; SPTR: Putative uncharacterized protein; NLP/P60 protein 958785..959342 Muricauda ruestringensis DSM 13258 11053697 YP_004787347.1 CDS Murru_0878 NC_015945.1 959362 961368 D PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein; COGs: COG0658 membrane metal-binding protein; InterPro IPR004477; KEGG: fbc:FB2170_08469 competence protein; PFAM: ComEC/Rec2-related protein; SPTR: Competence protein; TIGRFAM: ComEC/Rec2-related protein; ComEC/Rec2-like protein 959362..961368 Muricauda ruestringensis DSM 13258 11053698 YP_004787348.1 CDS Murru_0879 NC_015945.1 961365 962927 R PFAM: POT family; TIGRFAM: amino acid/peptide transporter (Peptide:H+ symporter), bacterial; COGs: COG3104 Dipeptide/tripeptide permease; InterPro IPR000109:IPR005279; KEGG: fbc:FB2170_08464 dipeptide/tripeptide permease; PFAM: Oligopeptide transporter; SPTR: Di-/tripeptide transporter; TIGRFAM: Amino acid/peptide transporter; amino acid/peptide transporter complement(961365..962927) Muricauda ruestringensis DSM 13258 11053699 YP_004787349.1 CDS Murru_0880 NC_015945.1 962943 965102 R PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR002469:IPR001375; KEGG: fbc:FB2170_08459 dipeptidyl aminopeptidase IV; PFAM: Peptidase S9B, dipeptidylpeptidase IV N-terminal; Peptidase S9, prolyl oligopeptidase, catalytic domain; PRIAM: Dipeptidyl-peptidase IV; SPTR: Dipeptidyl aminopeptidase IV; dipeptidyl-peptidase IV complement(962943..965102) Muricauda ruestringensis DSM 13258 11053700 YP_004787350.1 CDS Murru_0881 NC_015945.1 965279 966595 D PFAM: Hydroxymethylglutaryl-coenzyme A reductase; TIGRFAM: hydroxymethylglutaryl-CoA reductase, degradative; COGs: COG1257 Hydroxymethylglutaryl-CoA reductase; InterPro IPR004553; KEGG: fbc:FB2170_08454 hydroxymethylglutaryl CoA reductase; PRIAM: Hydroxymethylglutaryl-CoA reductase; SPTR: Hydroxymethylglutaryl CoA reductase; TIGRFAM: Hydroxymethylglutaryl-CoA reductase, bacterial type; hydroxymethylglutaryl-CoA reductase, degradative 965279..966595 Muricauda ruestringensis DSM 13258 11053701 YP_004787351.1 CDS Murru_0882 NC_015945.1 966598 967506 D KEGG: fbc:FB2170_08449 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 966598..967506 Muricauda ruestringensis DSM 13258 11053702 YP_004787352.1 CDS Murru_0883 NC_015945.1 967518 968246 D PFAM: Metallo-beta-lactamase superfamily; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: fbc:FB2170_01851 beta-lactamase II; PFAM: Beta-lactamase-like; PRIAM: Beta-lactamase; SMART: Beta-lactamase-like; SPTR: Beta-lactamase II; beta-lactamase 967518..968246 Muricauda ruestringensis DSM 13258 11053703 YP_004787353.1 CDS Murru_0884 NC_015945.1 968397 969089 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: fbc:FB2170_01247 DNA binding protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Putative uncharacterized protein; AraC family transcriptional regulator 968397..969089 Muricauda ruestringensis DSM 13258 11053704 YP_004787354.1 CDS Murru_0885 NC_015945.1 969094 969207 D hypothetical protein 969094..969207 Muricauda ruestringensis DSM 13258 11053705 YP_004787355.1 CDS Murru_0886 NC_015945.1 969530 972703 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: sli:Slin_6039 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; TonB-dependent receptor plug 969530..972703 Muricauda ruestringensis DSM 13258 11053706 YP_004787356.1 CDS Murru_0887 NC_015945.1 972716 974143 D KEGG: cpi:Cpin_1461 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 972716..974143 Muricauda ruestringensis DSM 13258 11053707 YP_004787357.1 CDS Murru_0888 NC_015945.1 974170 975012 D hypothetical protein 974170..975012 Muricauda ruestringensis DSM 13258 11053708 YP_004787358.1 CDS Murru_0889 NC_015945.1 975212 975772 D hypothetical protein 975212..975772 Muricauda ruestringensis DSM 13258 11053709 YP_004787359.1 CDS Murru_0890 NC_015945.1 975836 977956 R PFAM: PPIC-type PPIASE domain; InterPro IPR000297; KEGG: fbc:FB2170_08444 peptidylprolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: Peptidylprolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase complement(975836..977956) Muricauda ruestringensis DSM 13258 11053710 YP_004787360.1 CDS Murru_0891 NC_015945.1 978041 979330 R PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550:IPR000644:IPR005170; KEGG: fbc:FB2170_08439 putative transmembrane CBS domain transporter; PFAM: Cystathionine beta-synthase, core; Domain of unknown function DUF21; Transporter-associated domain; SPTR: Putative transmembrane CBS domain transporter; hypothetical protein complement(978041..979330) Muricauda ruestringensis DSM 13258 11053711 YP_004787361.1 CDS Murru_0892 NC_015945.1 979333 979536 R KEGG: fbc:FB2170_08434 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(979333..979536) Muricauda ruestringensis DSM 13258 11053712 YP_004787362.1 CDS Murru_0893 NC_015945.1 979538 980137 R PFAM: Protein of unknown function (DUF1239); InterPro IPR010664; KEGG: fbc:FB2170_08429 hypothetical protein; PFAM: Lipopolysccharide assembly, LptC-related; SPTR: Putative uncharacterized protein; hypothetical protein complement(979538..980137) Muricauda ruestringensis DSM 13258 11053713 YP_004787363.1 CDS Murru_0894 NC_015945.1 980137 981507 R KEGG: rbi:RB2501_08830 TPR domain-containing protein; SPTR: TPR domain protein; hypothetical protein complement(980137..981507) Muricauda ruestringensis DSM 13258 11053714 YP_004787364.1 CDS Murru_0895 NC_015945.1 981611 982876 R KEGG: fbc:FB2170_08419 putative outer membrane protein; SPTR: Putative outer membrane protein; putative outer membrane protein complement(981611..982876) Muricauda ruestringensis DSM 13258 11053715 YP_004787365.1 CDS Murru_0896 NC_015945.1 982877 983605 R PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III; COGs: COG1521 Putative transcriptional regulator protein; HAMAP: Type III pantothenate kinase; InterPro IPR004619; KEGG: fbc:FB2170_08414 putative regulatory protein; PFAM: Type III pantothenate kinase; SPTR: Type III pantothenate kinase; TIGRFAM: Type III pantothenate kinase; putative Baf family transcriptional acitvator complement(982877..983605) Muricauda ruestringensis DSM 13258 11053716 YP_004787366.1 CDS Murru_0897 NC_015945.1 984292 984873 D KEGG: bvu:BVU_3655 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 984292..984873 Muricauda ruestringensis DSM 13258 11053718 YP_004787367.1 CDS Murru_0898 NC_015945.1 984863 985309 D SPTR: Putative uncharacterized protein; hypothetical protein 984863..985309 Muricauda ruestringensis DSM 13258 11053719 YP_004787368.1 CDS Murru_0899 NC_015945.1 985608 986318 R PFAM: TIR domain; InterPro IPR000157; KEGG: lby:Lbys_0435 tir protein; PFAM: Toll-Interleukin receptor; SMART: Toll-Interleukin receptor; SPTR: Putative uncharacterized protein; TIR protein complement(985608..986318) Muricauda ruestringensis DSM 13258 11053720 YP_004787369.1 CDS Murru_0900 NC_015945.1 986443 986682 R PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: fjo:Fjoh_4552 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; helix-turn-helix domain-containing protein complement(986443..986682) Muricauda ruestringensis DSM 13258 11053721 YP_004787370.1 CDS Murru_0901 NC_015945.1 986780 987238 D hypothetical protein 986780..987238 Muricauda ruestringensis DSM 13258 11053722 YP_004787371.1 CDS Murru_0902 NC_015945.1 987277 988314 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: rbi:RB2501_05395 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulatory protein; AraC family transcriptional regulator complement(987277..988314) Muricauda ruestringensis DSM 13258 11053723 YP_004787372.1 CDS Murru_0903 NC_015945.1 988528 989223 D PFAM: Uncharacterised ACR, COG2135; COGs: COG2135 conserved hypothetical protein; InterPro IPR003738; KEGG: rbi:RB2501_08510 hypothetical protein; PFAM: Protein of unknown function DUF159; SPTR: Putative uncharacterized protein; hypothetical protein 988528..989223 Muricauda ruestringensis DSM 13258 11053724 YP_004787373.1 CDS Murru_0904 NC_015945.1 989393 989554 D PFAM: Protein of unknown function (DUF1328); HAMAP: Protein of unknown function DUF1328; InterPro IPR009760; KEGG: fjo:Fjoh_4310 hypothetical protein; PFAM: Protein of unknown function DUF1328; SPTR: Putative uncharacterized protein; hypothetical protein 989393..989554 Muricauda ruestringensis DSM 13258 11053725 YP_004787374.1 CDS Murru_0905 NC_015945.1 989598 989840 D KEGG: zpr:ZPR_3512 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 989598..989840 Muricauda ruestringensis DSM 13258 11053726 YP_004787375.1 CDS Murru_0906 NC_015945.1 989979 991400 D PFAM: Phospholipase D Active site motif; COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: fbc:FB2170_14418 cardiolipin synthetase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; SPTR: Phospholipase D; phospholipase D 989979..991400 Muricauda ruestringensis DSM 13258 11053727 YP_004787376.1 CDS Murru_0907 NC_015945.1 991473 991958 D KEGG: gfo:GFO_1631 secreted protein; SPTR: Putative uncharacterized protein; hypothetical protein 991473..991958 Muricauda ruestringensis DSM 13258 11053728 YP_004787377.1 CDS Murru_0908 NC_015945.1 992152 992784 D KEGG: cat:CA2559_09178 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 992152..992784 Muricauda ruestringensis DSM 13258 11053729 YP_004787378.1 CDS Murru_0909 NC_015945.1 992779 994302 R PFAM: GH3 auxin-responsive promoter; InterPro IPR004993; KEGG: cat:CA2559_12318 hypothetical protein; PFAM: GH3 auxin-responsive promoter; SPTR: Putative uncharacterized protein; GH3 auxin-responsive promoter complement(992779..994302) Muricauda ruestringensis DSM 13258 11053730 YP_004787379.1 CDS Murru_0910 NC_015945.1 994386 994682 R hypothetical protein complement(994386..994682) Muricauda ruestringensis DSM 13258 11053731 YP_004787380.1 CDS Murru_0911 NC_015945.1 994990 995217 D KEGG: rbi:RB2501_14879 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 994990..995217 Muricauda ruestringensis DSM 13258 11053732 YP_004787381.1 CDS Murru_0912 NC_015945.1 995515 995616 D hypothetical protein 995515..995616 Muricauda ruestringensis DSM 13258 11053733 YP_004787382.1 CDS Murru_0913 NC_015945.1 995725 997272 R PFAM: Glycosyl hydrolases family 32 C terminal; Glycosyl hydrolases family 32 N-terminal domain; COGs: COG1621 Beta-fructosidase (levanase/invertase); InterPro IPR013148:IPR013189:IPR001362; KEGG: gfo:GFO_0009 glycosy hydrolase family protein; PFAM: Glycosyl hydrolases family 32, N-terminal; Glycosyl hydrolase family 32, C-terminal; PRIAM: Fructan beta-fructosidase; SMART: Glycoside hydrolase, family 32; SPTR: Levanase; fructan beta-fructosidase complement(995725..997272) Muricauda ruestringensis DSM 13258 11053734 YP_004787383.1 CDS Murru_0914 NC_015945.1 997477 998085 D PFAM: Uncharacterized protein conserved in bacteria (DUF2064); COGs: COG3222 conserved hypothetical protein; InterPro IPR018641; KEGG: cat:CA2559_05025 hypothetical protein; PFAM: Protein of unknown function DUF2064; SPTR: Putative uncharacterized protein; hypothetical protein 997477..998085 Muricauda ruestringensis DSM 13258 11053735 YP_004787384.1 CDS Murru_0915 NC_015945.1 998090 998905 D PFAM: Phosphorylase superfamily; TIGRFAM: purine nucleoside phosphorylase I, inosine and guanosine-specific; inosine guanosine and xanthosine phosphorylase family; COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR000845:IPR011268:IPR011270; KEGG: fbc:FB2170_08394 purine nucleoside phosphorylase; PFAM: Nucleoside phosphorylase domain; PRIAM: Purine-nucleoside phosphorylase; SPTR: Purine nucleoside phosphorylase; TIGRFAM: Purine nucleoside phosphorylase I, inosine/guanosine-specific; Inosine guanosine/xanthosine phosphorylase; purine nucleoside phosphorylase I 998090..998905 Muricauda ruestringensis DSM 13258 11053736 YP_004787385.1 CDS Murru_0916 NC_015945.1 998902 999867 D PFAM: Methyltransferase domain; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: fbc:FB2170_08389 hypothetical protein; PFAM: Methyltransferase type 11; SPTR: Putative uncharacterized protein; type 11 methyltransferase 998902..999867 Muricauda ruestringensis DSM 13258 11053737 YP_004787386.1 CDS Murru_0917 NC_015945.1 999873 1000922 R PFAM: N-acetylmuramoyl-L-alanine amidase; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: rbi:RB2501_08745 putative cell wall biosynthesis related protein; PFAM: Cell wall hydrolase/autolysin, catalytic; SPTR: Putative cell wall biosynthesis related protein; cell wall hydrolase/autolysin complement(999873..1000922) Muricauda ruestringensis DSM 13258 11053738 YP_004787387.1 CDS Murru_0918 NC_015945.1 1000897 1001826 R PFAM: N-acetylmuramoyl-L-alanine amidase; KEGG: fbc:FB2170_08364 putative cell wall biosynthesis related protein; SPTR: Putative cell wall biosynthesis related protein; putative cell wall biosynthesis-like protein complement(1000897..1001826) Muricauda ruestringensis DSM 13258 11053739 YP_004787388.1 CDS Murru_0919 NC_015945.1 1001922 1002941 R KEGG: fbc:FB2170_08349 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1001922..1002941) Muricauda ruestringensis DSM 13258 11053740 YP_004787389.1 CDS Murru_0920 NC_015945.1 1003071 1004420 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027; KEGG: fbc:FB2170_08334 NADH oxidase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Rubredoxin--NAD(+) reductase; SPTR: NADH oxidase; rubredoxin--NAD(+) reductase 1003071..1004420 Muricauda ruestringensis DSM 13258 11053741 YP_004787390.1 CDS Murru_0921 NC_015945.1 1004474 1006084 D InterPro IPR001450; KEGG: rbi:RB2501_08730 pyridine nucleotide-disulphide oxidoreductase domain-containing protein; PFAM: 4Fe-4S binding domain; SPTR: Pyridine nucleotide-disulphide oxidoreductase domain protein; 4Fe-4S ferredoxin 1004474..1006084 Muricauda ruestringensis DSM 13258 11053742 YP_004787391.1 CDS Murru_0922 NC_015945.1 1006377 1007066 D PFAM: Glycosyl transferase family 2; InterPro IPR001173; KEGG: fbc:FB2170_08319 group 2 family glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 2 family protein; family 2 glycosyl transferase 1006377..1007066 Muricauda ruestringensis DSM 13258 11053743 YP_004787392.1 CDS Murru_0923 NC_015945.1 1007066 1008550 D PFAM: Glycosyl transferase family 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: rbi:RB2501_08720 glycosyltransferase; PFAM: Glycosyl transferase, family 2; PRIAM: Glucomannan 4-beta-mannosyltransferase; SPTR: Glycosyltransferase; glucomannan 4-beta-mannosyltransferase 1007066..1008550 Muricauda ruestringensis DSM 13258 11053744 YP_004787393.1 CDS Murru_0924 NC_015945.1 1008560 1009912 D PFAM: Protein of unknown function (DUF2029); KEGG: fbc:FB2170_08309 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1008560..1009912 Muricauda ruestringensis DSM 13258 11053745 YP_004787394.1 CDS Murru_0925 NC_015945.1 1010133 1010747 D PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: rbi:RB2501_08710 hypothetical protein; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Putative uncharacterized protein; N-acetyltransferase GCN5 1010133..1010747 Muricauda ruestringensis DSM 13258 11053746 YP_004787395.1 CDS Murru_0926 NC_015945.1 1010891 1012078 D PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; COGs: COG0137 Argininosuccinate synthase; InterPro IPR001518; KEGG: fbc:FB2170_08294 argininosuccinate synthase; PFAM: Argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: Argininosuccinate synthase; argininosuccinate synthase 1010891..1012078 Muricauda ruestringensis DSM 13258 11053747 YP_004787396.1 CDS Murru_0927 NC_015945.1 1012167 1013153 D PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form; COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase, type 1; InterPro IPR000534:IPR012280:IPR000706; KEGG: fbc:FB2170_08289 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation domain; PRIAM: N-acetyl-gamma-glutamyl-phosphate reductase; SMART: Semialdehyde dehydrogenase, NAD-binding; SPTR: N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, type 1; N-acetyl-gamma-glutamyl-phosphate reductase 1012167..1013153 Muricauda ruestringensis DSM 13258 11053748 YP_004787397.1 CDS Murru_0928 NC_015945.1 1013350 1014144 D PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR004455:IPR000304; KEGG: fbc:FB2170_08284 putative pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; PRIAM: Pyrroline-5-carboxylate reductase; SPTR: Putative pyrroline-5-carboxylate reductase; TIGRFAM: Pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 1013350..1014144 Muricauda ruestringensis DSM 13258 11053749 YP_004787398.1 CDS Murru_0929 NC_015945.1 1014194 1015321 D PFAM: Aminotransferase class-III; COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR005814; KEGG: fbc:FB2170_08279 acetylornithine aminotransferase; PFAM: Aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: Acetylornithine aminotransferase; acetylornithine transaminase 1014194..1015321 Muricauda ruestringensis DSM 13258 11053750 YP_004787399.1 CDS Murru_0930 NC_015945.1 1015318 1016256 D PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; COGs: COG0078 Ornithine carbamoyltransferase; InterPro IPR006132:IPR006131; KEGG: fbc:FB2170_08264 putative ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; PRIAM: N-acetylornithine carbamoyltransferase; SPTR: Putative ornithine carbamoyltransferase; N-acetylornithine carbamoyltransferase 1015318..1016256 Muricauda ruestringensis DSM 13258 11053751 YP_004787400.1 CDS Murru_0931 NC_015945.1 1016253 1016999 D PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: fbc:FB2170_08259 oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Oxidoreductase; 3-oxoacyl-ACP reductase 1016253..1016999 Muricauda ruestringensis DSM 13258 11053752 YP_004787401.1 CDS Murru_0932 NC_015945.1 1017001 1017780 D PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase; COGs: COG0548 Acetylglutamate kinase; InterPro IPR001048:IPR004662; KEGG: fbc:FB2170_08254 putative acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; PRIAM: Acetylglutamate kinase; SPTR: Acetylglutamate kinase; TIGRFAM: Acetylglutamate kinase; acetylglutamate kinase 1017001..1017780 Muricauda ruestringensis DSM 13258 11053753 YP_004787402.1 CDS Murru_0933 NC_015945.1 1017777 1018847 D PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650; KEGG: fbc:FB2170_08249 acetylornithine deacetylase; PFAM: Peptidase M20; Peptidase M20, dimerisation; PRIAM: Succinyl-diaminopimelate desuccinylase; SPTR: Acetylornithine deacetylase; succinyl-diaminopimelate desuccinylase 1017777..1018847 Muricauda ruestringensis DSM 13258 11053754 YP_004787403.1 CDS Murru_0934 NC_015945.1 1018937 1020223 D PFAM: Lyase; TIGRFAM: argininosuccinate lyase; COGs: COG0165 Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; InterPro IPR022761:IPR009049; KEGG: fbc:FB2170_08244 argininosuccinate lyase; PFAM: Lyase 1, N-terminal; PRIAM: Argininosuccinate lyase; SPTR: Argininosuccinate lyase; TIGRFAM: Argininosuccinate lyase; argininosuccinate lyase 1018937..1020223 Muricauda ruestringensis DSM 13258 11053755 YP_004787404.1 CDS Murru_0935 NC_015945.1 1020373 1021125 D hypothetical protein 1020373..1021125 Muricauda ruestringensis DSM 13258 11053756 YP_004787405.1 CDS Murru_0936 NC_015945.1 1021404 1022243 D KEGG: sth:STH1871 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1021404..1022243 Muricauda ruestringensis DSM 13258 11053757 YP_004787406.1 CDS Murru_0937 NC_015945.1 1022535 1024724 D PFAM: Domain of unknown function (DUF1083); KEGG: fbc:FB2170_11461 putative membrane associated hydrolase; SPTR: Putative membrane associated hydrolase; putative membrane associated hydrolase 1022535..1024724 Muricauda ruestringensis DSM 13258 11053758 YP_004787407.1 CDS Murru_0938 NC_015945.1 1024874 1025128 D PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein; InterPro IPR006442; KEGG: ran:Riean_1832 prevent-host-death family protein; PFAM: Prevent-host-death protein; SPTR: Putative uncharacterized protein; TIGRFAM: Prevent-host-death protein; prevent-host-death family protein 1024874..1025128 Muricauda ruestringensis DSM 13258 11053759 YP_004787408.1 CDS Murru_0939 NC_015945.1 1025131 1025388 D PFAM: Plasmid encoded toxin Txe; TIGRFAM: toxin-antitoxin system, toxin component, Txe/YoeB family; COGs: COG4115 conserved hypothetical protein; InterPro IPR009614; KEGG: ran:Riean_1833 addiction module toxin, txe/yoeb family; PFAM: Addiction module toxin, Txe/YoeB; SPTR: Toxin YoeB; TIGRFAM: Addiction module toxin, Txe/YoeB; Txe/YoeB family addiction module toxin 1025131..1025388 Muricauda ruestringensis DSM 13258 11053760 YP_004787409.1 CDS Murru_0940 NC_015945.1 1025473 1026330 R PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR002942:IPR006145:IPR000748; KEGG: rbi:RB2501_08660 ribosomal large subunit pseudouridine synthase B; PFAM: RNA-binding S4; Pseudouridine synthase, RsuA and RluB/C/D/E/F; SMART: RNA-binding S4; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; pseudouridine synthase Rsu complement(1025473..1026330) Muricauda ruestringensis DSM 13258 11053761 YP_004787410.1 CDS Murru_0941 NC_015945.1 1026373 1027278 R PFAM: UbiA prenyltransferase family; COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537; KEGG: rbi:RB2501_08655 hypothetical protein; PFAM: UbiA prenyltransferase; SPTR: Putative uncharacterized protein; UbiA prenyltransferase complement(1026373..1027278) Muricauda ruestringensis DSM 13258 11053762 YP_004787411.1 CDS Murru_0942 NC_015945.1 1027289 1028227 R PFAM: GHMP kinases N terminal domain; COGs: COG1577 Mevalonate kinase; InterPro IPR006204; KEGG: fbc:FB2170_08219 hypothetical protein; PFAM: GHMP kinase; SPTR: Putative uncharacterized protein; GHMP kinase complement(1027289..1028227) Muricauda ruestringensis DSM 13258 11053763 YP_004787412.1 CDS Murru_0943 NC_015945.1 1028368 1029453 R PFAM: GHMP kinases N terminal domain; TIGRFAM: diphosphomevalonate decarboxylase; COGs: COG3407 Mevalonate pyrophosphate decarboxylase; InterPro IPR006204:IPR005935; KEGG: fbc:FB2170_08214 diphosphomevalonate decarboxylase; PFAM: GHMP kinase; SPTR: Diphosphomevalonate decarboxylase; TIGRFAM: Diphosphomevalonate decarboxylase; diphosphomevalonate decarboxylase complement(1028368..1029453) Muricauda ruestringensis DSM 13258 11053764 YP_004787413.1 CDS Murru_0944 NC_015945.1 1029548 1030024 D PFAM: TspO/MBR family; COGs: COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog); InterPro IPR004307; KEGG: cat:CA2559_04610 integral membrane protein; PFAM: TspO/MBR-related protein; SPTR: Integral membrane protein; TspO and MBR-like protein 1029548..1030024 Muricauda ruestringensis DSM 13258 11053765 YP_004787414.1 CDS Murru_0945 NC_015945.1 1030026 1030574 R PFAM: Protein of unknown function (DUF1697); COGs: COG3797 conserved hypothetical protein; InterPro IPR012545; KEGG: fbc:FB2170_08199 hypothetical protein; PFAM: Protein of unknown function DUF1697; SPTR: Putative uncharacterized protein; hypothetical protein complement(1030026..1030574) Muricauda ruestringensis DSM 13258 11053766 YP_004787415.1 CDS Murru_0946 NC_015945.1 1030620 1032116 D PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase; COGs: COG0554 Glycerol kinase; HAMAP: Glycerol kinase; InterPro IPR018484:IPR018485:IPR005999; KEGG: zpr:ZPR_0767 glycerol kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; PRIAM: Glycerol kinase; SPTR: Glycerol kinase; TIGRFAM: Glycerol kinase; glycerol kinase 1030620..1032116 Muricauda ruestringensis DSM 13258 11053767 YP_004787416.1 CDS Murru_0947 NC_015945.1 1032151 1032879 D PFAM: Major intrinsic protein; TIGRFAM: MIP family channel proteins; COGs: COG0580 Glycerol uptake facilitator and related permease (Major Intrinsic Protein Family); InterPro IPR000425; KEGG: zpr:ZPR_0768 putative glycerol diffusion channel; PFAM: Major intrinsic protein; SPTR: Putative glycerol diffusion channel; major intrinsic protein 1032151..1032879 Muricauda ruestringensis DSM 13258 11053768 YP_004787417.1 CDS Murru_0948 NC_015945.1 1032885 1034150 R PFAM: HI0933-like protein; TIGRFAM: flavoprotein, HI0933 family; COGs: COG2081 flavoprotein; InterPro IPR004792; KEGG: fbc:FB2170_08194 hypothetical protein; PFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like; SPTR: HI0933-like protein; TIGRFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like; hypothetical protein complement(1032885..1034150) Muricauda ruestringensis DSM 13258 11053769 YP_004787418.1 CDS Murru_0949 NC_015945.1 1034150 1034845 R PFAM: Glycerophosphoryl diester phosphodiesterase family; COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: fbc:FB2170_08189 glcerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; SPTR: Glcerophosphoryl diester phosphodiesterase; glycerophosphoryl diester phosphodiesterase complement(1034150..1034845) Muricauda ruestringensis DSM 13258 11053770 YP_004787419.1 CDS Murru_0950 NC_015945.1 1034950 1036821 R PFAM: Alpha amylase, catalytic domain; COGs: COG0366 Glycosidase; InterPro IPR006047:IPR006589; KEGG: fbc:FB2170_08184 putative glycosidase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: Putative glycosidase; alpha amylase complement(1034950..1036821) Muricauda ruestringensis DSM 13258 11053771 YP_004787420.1 CDS Murru_0951 NC_015945.1 1036853 1037872 R PFAM: Bacterial regulatory proteins, lacI family; family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761; KEGG: fbc:FB2170_08169 putative LacI family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI; SPTR: Transcriptional regulator, LacI family; LacI family transcriptional regulator complement(1036853..1037872) Muricauda ruestringensis DSM 13258 11053772 YP_004787421.1 CDS Murru_0952 NC_015945.1 1038230 1041313 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: rbi:RB2501_08585 outer membrane protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Outer membrane protein; TonB-dependent receptor 1038230..1041313 Muricauda ruestringensis DSM 13258 11053773 YP_004787422.1 CDS Murru_0953 NC_015945.1 1041324 1042955 D PFAM: SusD family; InterPro IPR012944; KEGG: rbi:RB2501_08580 hypothetical protein; PFAM: RagB/SusD; SPTR: Putative outer membrane protein, probably involved in nutrient binding; RagB/SusD domain-containing protein 1041324..1042955 Muricauda ruestringensis DSM 13258 11053774 YP_004787423.1 CDS Murru_0954 NC_015945.1 1043122 1046424 D PFAM: ASPIC and UnbV; FG-GAP repeat; InterPro IPR013517; KEGG: rbi:RB2501_08575 hypothetical protein; PFAM: FG-GAP; SPTR: Putative uncharacterized protein; FG-GAP repeat-containing protein 1043122..1046424 Muricauda ruestringensis DSM 13258 11053775 YP_004787424.1 CDS Murru_0955 NC_015945.1 1046421 1049768 D PFAM: ASPIC and UnbV; InterPro IPR011519:IPR013517; KEGG: rbi:RB2501_08570 hypothetical protein; PFAM: ASPIC/UnbV; FG-GAP; SPTR: Putative uncharacterized protein; ASPIC/UnbV domain-containing protein 1046421..1049768 Muricauda ruestringensis DSM 13258 11053776 YP_004787425.1 CDS Murru_0956 NC_015945.1 1049761 1053000 D PFAM: ASPIC and UnbV; FG-GAP repeat; InterPro IPR013517; KEGG: rbi:RB2501_08565 hypothetical protein; PFAM: FG-GAP; SPTR: ASPIC-like protein; FG-GAP repeat-containing protein 1049761..1053000 Muricauda ruestringensis DSM 13258 11053777 YP_004787426.1 CDS Murru_0957 NC_015945.1 1052993 1054342 D PFAM: PAP2 superfamily; KEGG: rbi:RB2501_08560 phosphoesterase, PA-phosphatase related protein; SPTR: Phosphoesterase, PA-phosphatase related protein; phosphoesterase, PA-phosphatase-like protein 1052993..1054342 Muricauda ruestringensis DSM 13258 11053778 YP_004787427.1 CDS Murru_0958 NC_015945.1 1054365 1055264 D PFAM: Bacterial transcription activator, effector binding domain; KEGG: rbi:RB2501_08555 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1054365..1055264 Muricauda ruestringensis DSM 13258 11053779 YP_004787428.1 CDS Murru_0959 NC_015945.1 1055257 1056114 D KEGG: fbc:FB2170_08119 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1055257..1056114 Muricauda ruestringensis DSM 13258 11053780 YP_004787429.1 CDS Murru_0960 NC_015945.1 1056100 1056249 R hypothetical protein complement(1056100..1056249) Muricauda ruestringensis DSM 13258 11053781 YP_004787430.1 CDS Murru_0961 NC_015945.1 1056273 1058360 D PFAM: Helicase conserved C-terminal domain; RQC domain; HRDC domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; COGs: COG0514 Superfamily II DNA helicase; InterProIPR011545:IPR001650:IPR018982:IPR002121:IPR 006293:IPR004589:IPR014001; KEGG: cat:CA2559_01900 ATP-dependent DNA helicase RecQ; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; RQC domain; Helicase/RNase D C-terminal, HRDC domain; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; RQC domain; Helicase/RNase D C-terminal, HRDC domain; SPTR: ATP-dependent DNA helicase recQ; TIGRFAM: DNA helicase, ATP-dependent, RecQ type, bacterial; DNA helicase, ATP-dependent, RecQ type; ATP-dependent DNA helicase RecQ 1056273..1058360 Muricauda ruestringensis DSM 13258 11053782 YP_004787431.1 CDS Murru_0962 NC_015945.1 1058382 1062101 R PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: fbc:FB2170_08114 hypothetical protein; PFAM: Metallo-dependent phosphatase; SPTR: Putative uncharacterized protein; metallophosphoesterase complement(1058382..1062101) Muricauda ruestringensis DSM 13258 11053783 YP_004787432.1 CDS Murru_0963 NC_015945.1 1062149 1063342 D PFAM: HD domain; InterPro IPR006674:IPR003607; KEGG: fbc:FB2170_08109 hypothetical protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Putative uncharacterized protein; metal-dependent phosphohydrolase HD sub domain-containing protein 1062149..1063342 Muricauda ruestringensis DSM 13258 11053784 YP_004787433.1 CDS Murru_0964 NC_015945.1 1063346 1065721 R KEGG: fbc:FB2170_08104 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1063346..1065721) Muricauda ruestringensis DSM 13258 11053785 YP_004787434.1 CDS Murru_0965 NC_015945.1 1065794 1066735 D PFAM: Calcineurin-like phosphoesterase; KEGG: fbc:FB2170_08099 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1065794..1066735 Muricauda ruestringensis DSM 13258 11053786 YP_004787435.1 CDS Murru_0966 NC_015945.1 1066738 1067901 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: rbi:RB2501_08520 DNA binding protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: DNA binding protein; AraC family transcriptional regulator 1066738..1067901 Muricauda ruestringensis DSM 13258 11053787 YP_004787436.1 CDS Murru_0967 NC_015945.1 1067991 1069133 D PFAM: Acyltransferase family; KEGG: rbi:RB2501_08515 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1067991..1069133 Muricauda ruestringensis DSM 13258 11053788 YP_004787437.1 CDS Murru_0968 NC_015945.1 1069209 1069871 D KEGG: rbi:RB2501_08455 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1069209..1069871 Muricauda ruestringensis DSM 13258 11053789 YP_004787438.1 CDS Murru_0969 NC_015945.1 1069882 1072050 R PFAM: Penicillin amidase; COGs: COG2366 Protein related to penicillin acylase; InterPro IPR002692; KEGG: fbc:FB2170_07894 penicillin amidase family protein; PFAM: Peptidase S45, penicillin amidase; PRIAM: Glutaryl-7-aminocephalosporanic-acid acylase; SPTR: Penicillin amidase family protein; glutaryl-7-aminocephalosporanic-acid acylase complement(1069882..1072050) Muricauda ruestringensis DSM 13258 11053790 YP_004787439.1 CDS Murru_0970 NC_015945.1 1072102 1073142 R PFAM: Domain of unknown function (DUF477); COGs: COG1512 Beta-propeller domains of methanol dehydrogenase type; InterPro IPR007621; KEGG: pmr:PMI2644 hypothetical protein; PFAM: Protein of unknown function DUF477; SPTR: Putative membrane protein; hypothetical protein complement(1072102..1073142) Muricauda ruestringensis DSM 13258 11053791 YP_004787440.1 CDS Murru_0971 NC_015945.1 1073262 1074998 D PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR001140:IPR003439:IPR003593; KEGG: fbc:FB2170_07889 ABC transporter ATP-binding and permease; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding and permease; xenobiotic-transporting ATPase 1073262..1074998 Muricauda ruestringensis DSM 13258 11053792 YP_004787441.1 CDS Murru_0972 NC_015945.1 1075132 1076751 D PFAM: Pentapeptide repeats (8 copies); InterPro IPR001646; KEGG: cat:CA2559_03095 hypothetical protein; PFAM: Pentapeptide repeat; SPTR: Putative uncharacterized protein; pentapeptide repeat-containing protein 1075132..1076751 Muricauda ruestringensis DSM 13258 11053793 YP_004787442.1 CDS Murru_0973 NC_015945.1 1076773 1077105 R PFAM: 2Fe-2S iron-sulfur cluster binding domain; InterPro IPR001041; KEGG: rbi:RB2501_08445 ferredoxin; PFAM: Ferredoxin; SPTR: Ferredoxin; ferredoxin complement(1076773..1077105) Muricauda ruestringensis DSM 13258 11053794 YP_004787443.1 CDS Murru_0974 NC_015945.1 1077162 1078220 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG0492 Thioredoxin reductase; HAMAP: Ferredoxin--NADP reductase, type 2; InterPro IPR013027:IPR022890; KEGG: rbi:RB2501_08440 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Ferredoxin--NADP(+) reductase; SPTR: Thioredoxin reductase; ferredoxin--NADP reductase complement(1077162..1078220) Muricauda ruestringensis DSM 13258 11053795 YP_004787444.1 CDS Murru_0975 NC_015945.1 1078284 1078529 R PFAM: NifU-like domain; COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: rbi:RB2501_08435 hypothetical protein; PFAM: NIF system FeS cluster assembly, NifU, C-terminal; SPTR: Putative uncharacterized protein; nitrogen-fixing NifU domain-containing protein complement(1078284..1078529) Muricauda ruestringensis DSM 13258 11053796 YP_004787445.1 CDS Murru_0976 NC_015945.1 1078532 1079671 R PFAM: ParA/MinD ATPase like; ATPase MipZ; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR019591; KEGG: fbc:FB2170_07879 hypothetical protein; PFAM: ATPase-like, ParA/MinD; SPTR: Putative uncharacterized protein; ParA/MinD-like ATPase complement(1078532..1079671) Muricauda ruestringensis DSM 13258 11053797 YP_004787446.1 CDS Murru_0977 NC_015945.1 1079898 1081565 D PFAM: Amidase; COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR000120; KEGG: sli:Slin_6324 amidase; PFAM: Amidase; PRIAM: Amidase; SPTR: Glutamyl-tRNA(Gln) amidotransferase subunit A; amidase 1079898..1081565 Muricauda ruestringensis DSM 13258 11053798 YP_004787447.1 CDS Murru_0978 NC_015945.1 1081562 1081885 R PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; COGs: COG3695 methylated DNA-protein cysteine methyltransferase; InterPro IPR014048; KEGG: fbc:FB2170_07819 putative 6-O-methylguanine DNA methyltransferase family protein; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; SPTR: Putative 6-O-methylguanine DNA methyltransferase family protein; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; methylated-DNA--protein-cysteine methyltransferase complement(1081562..1081885) Muricauda ruestringensis DSM 13258 11053799 YP_004787448.1 CDS Murru_0979 NC_015945.1 1081887 1082522 R PFAM: LysE type translocator; InterPro IPR001123; KEGG: fbc:FB2170_07814 hypothetical protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Putative uncharacterized protein; lysine exporter protein LysE/YggA complement(1081887..1082522) Muricauda ruestringensis DSM 13258 11053800 YP_004787449.1 CDS Murru_0980 NC_015945.1 1082526 1083194 R PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; COGs: COG0220 S-adenosylmethionine-dependent methyltransferase; HAMAP: tRNA (guanine-N-7) methyltransferase; InterPro IPR003358; KEGG: cat:CA2559_01795 putative methyltransferase; PFAM: tRNA (guanine-N-7) methyltransferase; SPTR: tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N-7) methyltransferase; tRNA (guanine-N(7)-)-methyltransferase complement(1082526..1083194) Muricauda ruestringensis DSM 13258 11053801 YP_004787450.1 CDS Murru_0981 NC_015945.1 1083281 1084393 D PFAM: Glycosyltransferase family 28 C-terminal domain; TIGRFAM: conserved hypothetical protein; KEGG: fjo:Fjoh_0541 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1083281..1084393 Muricauda ruestringensis DSM 13258 11053802 YP_004787451.1 CDS Murru_0982 NC_015945.1 1084318 1085373 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG5002 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: rbi:RB2501_08410 sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Sensor histidine kinase; integral membrane sensor signal transduction histidine kinase complement(1084318..1085373) Muricauda ruestringensis DSM 13258 11053803 YP_004787452.1 CDS Murru_0983 NC_015945.1 1085373 1086059 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: fbc:FB2170_07794 response regulator DrrA; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SPTR: Response regulator DrrA; two component winged helix family transcriptional regulator complement(1085373..1086059) Muricauda ruestringensis DSM 13258 11053804 YP_004787453.1 CDS Murru_0984 NC_015945.1 1086272 1088641 D KEGG: amc:MADE_03437 putative lipoprotein; SPTR: Putative lipoprotein; putative lipoprotein 1086272..1088641 Muricauda ruestringensis DSM 13258 11053805 YP_004787454.1 CDS Murru_0985 NC_015945.1 1088739 1091564 D PFAM: TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: mtt:Ftrac_2803 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Outer membrane protein, putative; TonB-dependent receptor 1088739..1091564 Muricauda ruestringensis DSM 13258 11053806 YP_004787455.1 CDS Murru_0986 NC_015945.1 1091718 1092029 D KEGG: rbi:RB2501_08400 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1091718..1092029 Muricauda ruestringensis DSM 13258 11053807 YP_004787456.1 CDS Murru_0987 NC_015945.1 1091928 1092125 R hypothetical protein complement(1091928..1092125) Muricauda ruestringensis DSM 13258 11053808 YP_004787457.1 CDS Murru_0988 NC_015945.1 1092176 1092499 D KEGG: fbc:FB2170_07784 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1092176..1092499 Muricauda ruestringensis DSM 13258 11053809 YP_004787458.1 CDS Murru_0989 NC_015945.1 1092563 1093549 D PFAM: Acyl-protein synthetase, LuxE; KEGG: fbc:FB2170_07779 putative acyl protein synthase/acyl-CoA reductase-like protein; SPTR: Possible acyl protein synthase/acyl-CoA reductase-like protein; putative acyl protein synthase/acyl-CoA reductase-like protein 1092563..1093549 Muricauda ruestringensis DSM 13258 11053810 YP_004787459.1 CDS Murru_0990 NC_015945.1 1093551 1094846 R PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase; COGs: COG0162 Tyrosyl-tRNA synthetase; HAMAP: Tyrosyl-tRNA synthetase, class Ib; InterPro IPR002305:IPR002307; KEGG: fbc:FB2170_07774 tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; PRIAM: Tyrosine--tRNA ligase; SPTR: Tyrosyl-tRNA synthetase; TIGRFAM: Tyrosyl-tRNA synthetase, class Ib; tyrosyl-tRNA synthetase complement(1093551..1094846) Muricauda ruestringensis DSM 13258 11053811 YP_004787460.1 CDS Murru_0991 NC_015945.1 1094932 1095936 D PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: fbc:FB2170_07769 3-beta hydroxysteroid dehydrogenase/isomerase family protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: 3-beta hydroxysteroid dehydrogenase/isomerase family protein; NAD-dependent epimerase/dehydratase 1094932..1095936 Muricauda ruestringensis DSM 13258 11053812 YP_004787461.1 CDS Murru_0992 NC_015945.1 1095920 1096363 R KEGG: fbc:FB2170_07764 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1095920..1096363) Muricauda ruestringensis DSM 13258 11053813 YP_004787462.1 CDS Murru_0993 NC_015945.1 1096367 1097701 R PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type; COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR006680; KEGG: fbc:FB2170_07759 dihydroorotase; PFAM: Amidohydrolase 1; PRIAM: Allantoinase; SPTR: Dihydroorotase; Allantoinase complement(1096367..1097701) Muricauda ruestringensis DSM 13258 11053814 YP_004787463.1 CDS Murru_0994 NC_015945.1 1097704 1098432 R PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fbc:FB2170_07754 dolichol-phosphate mannosyltransferase; PFAM: Glycosyl transferase, family 2; PRIAM: Dolichyl-phosphate beta-D-mannosyltransferase; SPTR: Dolichol-phosphate mannosyltransferase; dolichyl-phosphate beta-D-mannosyltransferase complement(1097704..1098432) Muricauda ruestringensis DSM 13258 11053815 YP_004787464.1 CDS Murru_0995 NC_015945.1 1098554 1100209 D COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; KEGG: fbc:FB2170_07749 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1098554..1100209 Muricauda ruestringensis DSM 13258 11053816 YP_004787465.1 CDS Murru_0996 NC_015945.1 1100209 1100865 D KEGG: fbc:FB2170_07744 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1100209..1100865 Muricauda ruestringensis DSM 13258 11053817 YP_004787466.1 CDS Murru_0997 NC_015945.1 1100872 1101615 D PFAM: Uroporphyrinogen-III synthase HemD; COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: fbc:FB2170_07739 putative uroporphyrinogen-III synthase; PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; SPTR: Possible uroporphyrinogen-III synthase; uroporphyrinogen III synthase HEM4 1100872..1101615 Muricauda ruestringensis DSM 13258 11053818 YP_004787467.1 CDS Murru_0998 NC_015945.1 1101684 1103300 R PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); COGs: COG1866 Phosphoenolpyruvate carboxykinase (ATP); HAMAP: Phosphoenolpyruvate carboxykinase, ATP-utilising; InterPro IPR001272; KEGG: fbc:FB2170_07734 phosphoenolpyruvate carboxykinase; PFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; SPTR: Phosphoenolpyruvate carboxykinase [ATP] 1; TIGRFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; phosphoenolpyruvate carboxykinase complement(1101684..1103300) Muricauda ruestringensis DSM 13258 11053819 YP_004787468.1 CDS Murru_0999 NC_015945.1 1103364 1103756 R PFAM: Protein of unknown function (DUF423); COGs: COG2363 Uncharacterized small membrane protein; InterPro IPR006696; KEGG: fbc:FB2170_07729 hypothetical protein; PFAM: Protein of unknown function DUF423; SPTR: Putative uncharacterized protein; hypothetical protein complement(1103364..1103756) Muricauda ruestringensis DSM 13258 11053820 YP_004787469.1 CDS Murru_1000 NC_015945.1 1103836 1105209 D PFAM: Saccharopine dehydrogenase; COGs: COG1748 Saccharopine dehydrogenase and related protein; InterPro IPR005097; KEGG: fbc:FB2170_07724 saccharopine dehydrogenase; PFAM: Saccharopine dehydrogenase / Homospermidine synthase; PRIAM: Saccharopine dehydrogenase (NADP(+), L-glutamate-forming); SPTR: Saccharopine dehydrogenase, putative; saccharopine dehydrogenase 1103836..1105209 Muricauda ruestringensis DSM 13258 11053821 YP_004787470.1 CDS Murru_1001 NC_015945.1 1105258 1105728 D PFAM: Bacterial regulatory protein, arsR family; AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019887:IPR019888; KEGG: rbi:RB2501_08330 putative AsnC-family transcriptional regulatory protein; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; SPTR: Putative AsnC-family transcriptional regulatory protein; AsnC family transcriptional regulator 1105258..1105728 Muricauda ruestringensis DSM 13258 11053822 YP_004787471.1 CDS Murru_1002 NC_015945.1 1105768 1106088 D KEGG: phe:Phep_0799 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1105768..1106088 Muricauda ruestringensis DSM 13258 11053823 YP_004787472.1 CDS Murru_1003 NC_015945.1 1106197 1106715 D PFAM: Ferritin-like domain; COGs: COG1528 Ferritin-like protein; InterPro IPR008331; KEGG: zpr:ZPR_0482 ferritin-like protein; PFAM: Ferritin/Dps protein; SPTR: Ferritin-like protein; ferritin Dps family protein 1106197..1106715 Muricauda ruestringensis DSM 13258 11053824 YP_004787473.1 CDS Murru_1004 NC_015945.1 1106873 1107415 R PFAM: DinB family; KEGG: fbc:FB2170_04375 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1106873..1107415) Muricauda ruestringensis DSM 13258 11053825 YP_004787474.1 CDS Murru_1005 NC_015945.1 1107425 1107766 R PFAM: HxlR-like helix-turn-helix; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: cps:CPS_3596 putative transcriptional regulator; PFAM: Helix-turn-helix, HxlR type; SPTR: Putative transcriptional regulator; HxlR family transcriptional regulator complement(1107425..1107766) Muricauda ruestringensis DSM 13258 11053826 YP_004787475.1 CDS Murru_1006 NC_015945.1 1107896 1108597 R PFAM: Putative neutral zinc metallopeptidase; COGs: COG2738 Zn-dependent protease; InterPro IPR007395; KEGG: fbc:FB2170_07714 hypothetical protein; PFAM: Peptidase, membrane zinc metallopeptidase, putative; SPTR: Putative uncharacterized protein; peptidase membrane zinc metallopeptidase complement(1107896..1108597) Muricauda ruestringensis DSM 13258 11053827 YP_004787476.1 CDS Murru_1007 NC_015945.1 1108695 1109795 R PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase; COGs: COG0686 Alanine dehydrogenase; InterPro IPR007886:IPR007698:IPR008141; KEGG: rbi:RB2501_08320 putative alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal; PRIAM: Alanine dehydrogenase; SPTR: Putative alanine dehydrogenase; TIGRFAM: Alanine dehydrogenase/pyridine nucleotide transhydrogenase; alanine dehydrogenase complement(1108695..1109795) Muricauda ruestringensis DSM 13258 11053828 YP_004787477.1 CDS Murru_1008 NC_015945.1 1109806 1109907 R hypothetical protein complement(1109806..1109907) Muricauda ruestringensis DSM 13258 11053829 YP_004787478.1 CDS Murru_1009 NC_015945.1 1110049 1110159 R hypothetical protein complement(1110049..1110159) Muricauda ruestringensis DSM 13258 11053830 YP_004787479.1 CDS Murru_1010 NC_015945.1 1110181 1113240 R PFAM: tRNA synthetases class I (I, L, M and V); tRNA synthetases class I (M); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; COGs: COG0495 Leucyl-tRNA synthetase; InterPro IPR015413:IPR002300:IPR013155:IPR002302; KEGG: fbc:FB2170_07704 leucyl-tRNA synthetase; PFAM: Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Aminoacyl-tRNA synthetase, class I (M); Aminoacyl-tRNA synthetase, class Ia; PRIAM: Leucine--tRNA ligase; SPTR: Leucyl-tRNA synthetase; TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; leucyl-tRNA synthetase complement(1110181..1113240) Muricauda ruestringensis DSM 13258 11053831 YP_004787480.1 CDS Murru_1011 NC_015945.1 1113330 1114208 D PFAM: Predicted permease; COGs: COG2177 Cell division protein; InterPro IPR003838; KEGG: fbc:FB2170_07694 putative cell division protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative cell division protein; hypothetical protein 1113330..1114208 Muricauda ruestringensis DSM 13258 11053832 YP_004787481.1 CDS Murru_1012 NC_015945.1 1114218 1114484 D PFAM: Protein of unknown function (DUF3098); KEGG: fbc:FB2170_07689 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1114218..1114484 Muricauda ruestringensis DSM 13258 11053833 YP_004787482.1 CDS Murru_1013 NC_015945.1 1114486 1115280 D PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP; COGs: COG1968 Uncharacterized bacitracin resistance protein; HAMAP: Bacitracin resistance protein BacA; InterPro IPR003824; KEGG: fbc:FB2170_07684 putative bacitracin resistance protein; PFAM: Bacitracin resistance protein BacA; SPTR: Undecaprenyl-diphosphatase; undecaprenyl-diphosphatase 1114486..1115280 Muricauda ruestringensis DSM 13258 11053834 YP_004787483.1 CDS Murru_1014 NC_015945.1 1115312 1116016 D PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase II, TruB; InterPro IPR002501:IPR014780; KEGG: fbc:FB2170_07679 putative tRNA pseudouridine synthase; PFAM: Pseudouridine synthase II; SPTR: tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase II, TruB; tRNA pseudouridine synthase B 1115312..1116016 Muricauda ruestringensis DSM 13258 11053835 YP_004787484.1 CDS Murru_1015 NC_015945.1 1116065 1116784 D TIGRFAM: TonB family C-terminal domain; KEGG: rbi:RB2501_08285 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1116065..1116784 Muricauda ruestringensis DSM 13258 11053836 YP_004787485.1 CDS Murru_1016 NC_015945.1 1116767 1117447 R KEGG: fbc:FB2170_07669 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1116767..1117447) Muricauda ruestringensis DSM 13258 11053837 YP_004787486.1 CDS Murru_1017 NC_015945.1 1117471 1118886 R PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; KEGG: rbi:RB2501_08275 outer membrane efflux protein; SPTR: Putative uncharacterized protein; outer membrane efflux protein complement(1117471..1118886) Muricauda ruestringensis DSM 13258 11053838 YP_004787487.1 CDS Murru_1018 NC_015945.1 1118870 1120225 R COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR000089; KEGG: rbi:RB2501_08270 hypothetical protein; PFAM: Biotin/lipoyl attachment; SPTR: Putative uncharacterized protein; biotin/lipoyl attachment domain-containing protein complement(1118870..1120225) Muricauda ruestringensis DSM 13258 11053839 YP_004787488.1 CDS Murru_1019 NC_015945.1 1120231 1121898 R PFAM: ABC transporter; ABC transporter transmembrane region; Bacterial protein of unknown function (DUF939); COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterPro IPR003439; KEGG: rbi:RB2501_08265 HlyB/MsbA family ABC transporter; PFAM: ABC transporter-like; PRIAM: Xenobiotic-transporting ATPase; SPTR: HlyB/MsbA family ABC transporter; xenobiotic-transporting ATPase complement(1120231..1121898) Muricauda ruestringensis DSM 13258 11053840 YP_004787489.1 CDS Murru_1020 NC_015945.1 1121891 1122565 R InterPro IPR001647; KEGG: fbc:FB2170_07659 hypothetical protein; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Putative uncharacterized protein; regulatory protein TetR complement(1121891..1122565) Muricauda ruestringensis DSM 13258 11053841 YP_004787490.1 CDS Murru_1021 NC_015945.1 1122697 1123260 D PFAM: Methyladenine glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase I; COGs: COG2818 3-methyladenine DNA glycosylase; InterPro IPR005019:IPR004597; KEGG: zpr:ZPR_4445 DNA-3-methyladenine glycosylase; PFAM: Methyladenine glycosylase; PRIAM: DNA-3-methyladenine glycosylase I; SPTR: DNA-3-methyladenine glycosidase I; TIGRFAM: DNA-3-methyladenine glycosylase I; DNA-3-methyladenine glycosylase I 1122697..1123260 Muricauda ruestringensis DSM 13258 11053842 YP_004787491.1 CDS Murru_1022 NC_015945.1 1123294 1123950 R PFAM: Leucyl/phenylalanyl-tRNA protein transferase; TIGRFAM: leucyl/phenylalanyl-tRNA--protein transferase; COGs: COG2360 Leu/Phe-tRNA-protein transferase; HAMAP: Leucyl/phenylalanyl-tRNA-protein transferase; InterPro IPR004616; KEGG: fbc:FB2170_07614 leucyl/phenylalanyl-tRNA--protein transferase; PFAM: Leucyl/phenylalanyl-tRNA-protein transferase; PRIAM: Leucyltransferase; SPTR: Leucyl/phenylalanyl-tRNA--protein transferase; TIGRFAM: Leucyl/phenylalanyl-tRNA-protein transferase; leucyl/phenylalanyl-tRNA--protein transferase complement(1123294..1123950) Muricauda ruestringensis DSM 13258 11053843 YP_004787492.1 CDS Murru_1023 NC_015945.1 1124039 1124416 R PFAM: Protein of unknown function (DUF3127); KEGG: fbc:FB2170_07609 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1124039..1124416) Muricauda ruestringensis DSM 13258 11053844 YP_004787493.1 CDS Murru_1024 NC_015945.1 1124539 1125690 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: fbc:FB2170_07594 sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Sensor histidine kinase; manually curated; integral membrane sensor signal transduction histidine kinase 1124539..1125690 Muricauda ruestringensis DSM 13258 11053845 YP_004787494.1 CDS Murru_1025 NC_015945.1 1125694 1126038 D KEGG: fbc:FB2170_07589 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1125694..1126038 Muricauda ruestringensis DSM 13258 11053846 YP_004787495.1 CDS Murru_1026 NC_015945.1 1126035 1126424 R PFAM: HIT domain; COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: cat:CA2559_01700 HIT family protein; PFAM: Histidine triad (HIT) protein; SPTR: HIT family protein; histidine triad (HIT) protein complement(1126035..1126424) Muricauda ruestringensis DSM 13258 11053847 YP_004787496.1 CDS Murru_1027 NC_015945.1 1126493 1126969 R PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA; COGs: COG0782 Transcription elongation factor; HAMAP: Transcription elongation factor greA; InterPro IPR022691:IPR001437:IPR006359; KEGG: rbi:RB2501_08190 transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB, N-terminal; Transcription elongation factor, GreA/GreB, C-terminal; SPTR: Transcription elongation factor; TIGRFAM: Transcription elongation factor GreA; transcription elongation factor GreA complement(1126493..1126969) Muricauda ruestringensis DSM 13258 11053848 YP_004787497.1 CDS Murru_1028 NC_015945.1 1127066 1127590 D KEGG: rbi:RB2501_08185 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1127066..1127590 Muricauda ruestringensis DSM 13258 11053849 YP_004787498.1 CDS Murru_1029 NC_015945.1 1127600 1128586 D PFAM: Aldo/keto reductase family; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR023210; KEGG: fjo:Fjoh_2503 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain; SPTR: Aldo/keto reductase; NADP-dependent oxidoreductase domain-containing protein 1127600..1128586 Muricauda ruestringensis DSM 13258 11053850 YP_004787499.1 CDS Murru_1030 NC_015945.1 1128735 1130984 R PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_07564 hypothetical protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Putative uncharacterized protein; TonB-dependent receptor complement(1128735..1130984) Muricauda ruestringensis DSM 13258 11053851 YP_004787500.1 CDS Murru_1031 NC_015945.1 1131261 1133699 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; CHASE3 domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR001789; KEGG: cat:CA2559_01510 two-component system sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; SPTR: Two-component system sensor histidine kinase; multi-sensor hybrid histidine kinase 1131261..1133699 Muricauda ruestringensis DSM 13258 11053852 YP_004787501.1 CDS Murru_1032 NC_015945.1 1133674 1135017 R PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR002078:IPR002197:IPR003593; KEGG: fjo:Fjoh_0638 two component, sigma54 specific, Fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; two component sigma-54 specific Fis family transcriptional regulator complement(1133674..1135017) Muricauda ruestringensis DSM 13258 11053853 YP_004787502.1 CDS Murru_1033 NC_015945.1 1135149 1135451 R PFAM: Protein of unknown function (DUF2874); KEGG: rbi:RB2501_08160 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1135149..1135451) Muricauda ruestringensis DSM 13258 11053854 YP_004787503.1 CDS Murru_1034 NC_015945.1 1135798 1136025 D hypothetical protein 1135798..1136025 Muricauda ruestringensis DSM 13258 11053855 YP_004787504.1 CDS Murru_1035 NC_015945.1 1136281 1137819 R KEGG: fbc:FB2170_07559 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1136281..1137819) Muricauda ruestringensis DSM 13258 11053856 YP_004787505.1 CDS Murru_1036 NC_015945.1 1137812 1138381 R TIGRFAM: nicotinamide-nucleotide adenylyltransferase, NadR type; COGs: COG3172 ATPase/kinase involved in NAD metabolism; KEGG: fbc:FB2170_07554 putative transcriptional regulatory protein NadR; SPTR: NadR-like transcriptional regulator; putative transcriptional regulatory protein NadR complement(1137812..1138381) Muricauda ruestringensis DSM 13258 11053857 YP_004787506.1 CDS Murru_1037 NC_015945.1 1138342 1138977 R PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC; COGs: COG3201 Nicotinamide mononucleotide transporter; InterPro IPR006419; KEGG: rbi:RB2501_08150 hypothetical protein; PFAM: Nicotinamide mononucleotide transporter PnuC; SPTR: Putative uncharacterized protein; TIGRFAM: Nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC complement(1138342..1138977) Muricauda ruestringensis DSM 13258 11053858 YP_004787507.1 CDS Murru_1038 NC_015945.1 1138961 1139221 R PFAM: Domain of unknown function DUF77; KEGG: fbc:FB2170_07544 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1138961..1139221) Muricauda ruestringensis DSM 13258 11053859 YP_004787508.1 CDS Murru_1039 NC_015945.1 1139261 1139902 R PFAM: 4'-phosphopantetheinyl transferase superfamily; KEGG: fbc:FB2170_07539 siderophore (surfactin) biosynthesis regulatory protein; SPTR: Siderophore (Surfactin) biosynthesis regulatory protein; siderophore (surfactin) biosynthesis regulatory protein complement(1139261..1139902) Muricauda ruestringensis DSM 13258 11053860 YP_004787509.1 CDS Murru_1040 NC_015945.1 1139977 1141293 D PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase; COGs: COG0499 S-adenosylhomocysteine hydrolase; HAMAP: Adenosylhomocysteinase; InterPro IPR000043:IPR015878; KEGG: fbc:FB2170_07534 S-adenosyl-L-homocysteine hydrolase; PFAM: Adenosylhomocysteinase; S-adenosyl-L-homocysteine hydrolase, NAD binding; PRIAM: Adenosylhomocysteinase; SPTR: Adenosylhomocysteinase; TIGRFAM: Adenosylhomocysteinase; adenosylhomocysteinase 1139977..1141293 Muricauda ruestringensis DSM 13258 11053861 YP_004787510.1 CDS Murru_1041 NC_015945.1 1141364 1141942 R PFAM: Domain of unknown function (DUF3332); KEGG: rbi:RB2501_08130 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1141364..1141942) Muricauda ruestringensis DSM 13258 11053862 YP_004787511.1 CDS Murru_1042 NC_015945.1 1142076 1143185 D PFAM: Alanine racemase, N-terminal domain; COGs: COG3616 amino acid aldolase or racemase; InterPro IPR001608; KEGG: dfe:Dfer_1026 alanine racemase domain protein; PFAM: Alanine racemase, N-terminal; SPTR: Alanine racemase domain protein; alanine racemase domain-containing protein 1142076..1143185 Muricauda ruestringensis DSM 13258 11053863 YP_004787512.1 CDS Murru_1043 NC_015945.1 1143356 1143994 D hypothetical protein 1143356..1143994 Muricauda ruestringensis DSM 13258 11053864 YP_004787513.1 CDS Murru_1045 NC_015945.1 1144443 1144703 R PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; COGs: COG0211 Ribosomal protein L27; HAMAP: Ribosomal protein L27; InterPro IPR001684; KEGG: fbc:FB2170_07524 50S ribosomal protein L27; PFAM: Ribosomal protein L27; SPTR: 50S ribosomal protein L27; TIGRFAM: Ribosomal protein L27; 50S ribosomal protein L27 complement(1144443..1144703) Muricauda ruestringensis DSM 13258 11053866 YP_004787514.1 CDS Murru_1046 NC_015945.1 1144728 1145273 R PFAM: Ribosomal prokaryotic L21 protein; Rho termination factor, N-terminal domain; TIGRFAM: ribosomal protein L21; COGs: COG0261 Ribosomal protein L21; HAMAP: Ribosomal protein L21; InterPro IPR001787:IPR011112; KEGG: rbi:RB2501_08120 putative 50S ribosomal protein L21; PFAM: Ribosomal protein L21; Rho termination factor, N-terminal; SMART: Rho termination factor, N-terminal; SPTR: 50S ribosomal protein L21; TIGRFAM: Ribosomal protein L21; 50S ribosomal protein L21 complement(1144728..1145273) Muricauda ruestringensis DSM 13258 11053867 YP_004787515.1 CDS Murru_1047 NC_015945.1 1145369 1145824 R KEGG: rbi:RB2501_08115 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1145369..1145824) Muricauda ruestringensis DSM 13258 11053868 YP_004787516.1 CDS Murru_1048 NC_015945.1 1146007 1147329 D PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: fbc:FB2170_07514 putative zinc protease; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; SPTR: Probable peptidase; peptidase M16 domain-containing protein 1146007..1147329 Muricauda ruestringensis DSM 13258 11053869 YP_004787517.1 CDS Murru_1049 NC_015945.1 1147331 1149403 D PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: fbc:FB2170_07509 putative metallopeptidase, M16 family protein; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; SPTR: Putative metallopeptidase, M16 family protein; peptidase M16 domain-containing protein 1147331..1149403 Muricauda ruestringensis DSM 13258 11053870 YP_004787518.1 CDS Murru_1050 NC_015945.1 1149577 1151673 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent copper receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_14943 TonB dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB dependent receptor, putative; TonB-dependent receptor complement(1149577..1151673) Muricauda ruestringensis DSM 13258 11053871 YP_004787519.1 CDS Murru_1051 NC_015945.1 1151754 1152077 R KEGG: fbc:FB2170_14938 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein complement(1151754..1152077) Muricauda ruestringensis DSM 13258 11053872 YP_004787520.1 CDS Murru_1052 NC_015945.1 1152281 1152715 D KEGG: fbc:FB2170_07489 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1152281..1152715 Muricauda ruestringensis DSM 13258 11053873 YP_004787521.1 CDS Murru_1053 NC_015945.1 1152722 1153279 R TIGRFAM: gliding motility-associated lipoprotein GldD; InterPro IPR019850; KEGG: rbi:RB2501_08085 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Gliding motility-associated lipoprotein, GldD; gliding motility-associated lipoprotein GldD complement(1152722..1153279) Muricauda ruestringensis DSM 13258 11053874 YP_004787522.1 CDS Murru_1054 NC_015945.1 1153269 1154579 R PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; TIGRFAM: gliding motility-associated protein GldE; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550:IPR000644:IPR005170:IPR019862; KEGG: fbc:FB2170_07479 putative transmembrane CorC/HlyC family transporter associated protein; PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated domain; SMART: Cystathionine beta-synthase, core; SPTR: Putative transmembrane CorC/HlyC family transporter associated protein; TIGRFAM: Gliding motility-associated protein GldE; gliding motility-associated protein GldE complement(1153269..1154579) Muricauda ruestringensis DSM 13258 11053875 YP_004787523.1 CDS Murru_1055 NC_015945.1 1154607 1155068 R PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424:IPR011344; KEGG: fbc:FB2170_07474 single-strand binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; single-strand binding protein complement(1154607..1155068) Muricauda ruestringensis DSM 13258 11053876 YP_004787524.1 CDS Murru_1056 NC_015945.1 1155254 1156291 R PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: A/G-specific adenine glycosylase; COGs: COG1194 A/G-specific DNA glycosylase; InterPro IPR003265:IPR003651:IPR005760; KEGG: fbc:FB2170_07469 A/G-specific adenine glycosylase; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; SMART: HhH-GPD domain; SPTR: A/G-specific adenine glycosylase; TIGRFAM: A/G-specific adenine glycosylase MutY, bacterial form; A/G-specific adenine glycosylase complement(1155254..1156291) Muricauda ruestringensis DSM 13258 11053877 YP_004787525.1 CDS Murru_1057 NC_015945.1 1156416 1156706 D PFAM: Bacterial DNA-binding protein; COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: fbc:FB2170_07464 DNA-binding protein HU; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; SPTR: Histone family protein DNA-binding protein; histone family protein DNA-binding protein 1156416..1156706 Muricauda ruestringensis DSM 13258 11053878 YP_004787526.1 CDS Murru_1058 NC_015945.1 1156977 1158527 D PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; COGs: COG1530 Ribonuclease G and E; InterPro IPR019307:IPR004659; KEGG: fbc:FB2170_07459 ribonuclease G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; SPTR: Ribonuclease G; TIGRFAM: Ribonuclease E/G; Rne/Rng family ribonuclease 1156977..1158527 Muricauda ruestringensis DSM 13258 11053879 YP_004787527.1 CDS Murru_1059 NC_015945.1 1158615 1160984 D COGs: COG3408 Glycogen debranching protein; KEGG: rbi:RB2501_08055 putative glycogen debranching enzyme; SPTR: Predicted glycogen debranching enzyme; putative glycogen debranching protein 1158615..1160984 Muricauda ruestringensis DSM 13258 11053880 YP_004787528.1 CDS Murru_1060 NC_015945.1 1160991 1161476 D PFAM: RecX family; COGs: COG2137 conserved hypothetical protein; InterPro IPR003783; KEGG: fbc:FB2170_07449 putative transcriptional regulatory protein; PFAM: Regulatory protein RecX; SPTR: Regulatory protein RecX; regulatory protein RecX 1160991..1161476 Muricauda ruestringensis DSM 13258 11053881 YP_004787529.1 CDS Murru_1061 NC_015945.1 1161485 1162354 R InterPro IPR003347; KEGG: fbc:FB2170_07444 hypothetical protein; SMART: Transcription factor jumonji/aspartyl beta-hydroxylase; SPTR: JmjC domain protein; transcription factor jumonji jmjC domain-containing protein complement(1161485..1162354) Muricauda ruestringensis DSM 13258 11053882 YP_004787530.1 CDS Murru_1063 NC_015945.1 1162521 1164350 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_07439 TonB-dependent receptor domain-containing protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor domain protein; TonB-dependent receptor complement(1162521..1164350) Muricauda ruestringensis DSM 13258 11053884 YP_004787531.1 CDS Murru_1064 NC_015945.1 1164438 1165934 D PFAM: Bacterial regulatory proteins, gntR family; COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR000524; KEGG: fbc:FB2170_07434 GntR family transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family, with aminotransferase domain; GntR family transcriptional regulator 1164438..1165934 Muricauda ruestringensis DSM 13258 11053885 YP_004787532.1 CDS Murru_1065 NC_015945.1 1166191 1167687 D PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: fbc:FB2170_07429 hypothetical protein; PFAM: Glycosyl transferase, family 39; SPTR: Putative uncharacterized protein; glycosyl transferase family protein 1166191..1167687 Muricauda ruestringensis DSM 13258 11053886 YP_004787533.1 CDS Murru_1066 NC_015945.1 1167861 1169543 D PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: afw:Anae109_0521 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 39; SPTR: Glycosyl transferase family 39; glycosyl transferase family protein 1167861..1169543 Muricauda ruestringensis DSM 13258 11053887 YP_004787534.1 CDS Murru_1068 NC_015945.1 1169944 1170330 R KEGG: fbc:FB2170_07424 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1169944..1170330) Muricauda ruestringensis DSM 13258 11053889 YP_004787535.1 CDS Murru_1069 NC_015945.1 1170327 1170509 R hypothetical protein complement(1170327..1170509) Muricauda ruestringensis DSM 13258 11053890 YP_004787536.1 CDS Murru_1070 NC_015945.1 1170574 1172370 D PFAM: M61 glycyl aminopeptidase; COGs: COG3975 protease with the C-terminal PDZ domain; InterPro IPR007963:IPR001478; KEGG: fbc:FB2170_07419 hypothetical protein; PFAM: Peptidase M61; SMART: PDZ/DHR/GLGF; SPTR: Putative uncharacterized protein; peptidase M61 domain-containing protein 1170574..1172370 Muricauda ruestringensis DSM 13258 11053891 YP_004787537.1 CDS Murru_1071 NC_015945.1 1172371 1172901 D PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: mxa:MXAN_2839 acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Acetyltransferase, GNAT family; N-acetyltransferase GCN5 1172371..1172901 Muricauda ruestringensis DSM 13258 11053892 YP_004787538.1 CDS Murru_1072 NC_015945.1 1173107 1174249 R PFAM: Putative esterase; KEGG: fbc:FB2170_07364 putative hydrolase; SPTR: Predicted hydrolase of the alpha/beta superfamily protein; putative hydrolase complement(1173107..1174249) Muricauda ruestringensis DSM 13258 11053893 YP_004787539.1 CDS Murru_1073 NC_015945.1 1174275 1175240 R PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; InterPro IPR022791:IPR005242; KEGG: fbc:FB2170_07369 putative dolichol-P-glucose synthetase; PFAM: Lysylphosphatidylglycerol synthetase/UPF0104; SPTR: Putative dolichol-P-glucose synthetase; lysylphosphatidylglycerol synthetase complement(1174275..1175240) Muricauda ruestringensis DSM 13258 11053894 YP_004787540.1 CDS Murru_1074 NC_015945.1 1175244 1175594 R PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase; COGs: COG0853 Aspartate 1-decarboxylase; HAMAP: Aspartate decarboxylase; InterPro IPR003190; KEGG: rbi:RB2501_07965 aspartate alpha-decarboxylase; PFAM: Aspartate decarboxylase; PRIAM: Aspartate 1-decarboxylase; SPTR: Aspartate 1-decarboxylase; TIGRFAM: Aspartate decarboxylase; aspartate 1-decarboxylase complement(1175244..1175594) Muricauda ruestringensis DSM 13258 11053895 YP_004787541.1 CDS Murru_1075 NC_015945.1 1175607 1176455 R PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; cytidyltransferase-related domain; COGs: COG0414 Panthothenate synthetase; HAMAP: Pantoate-beta-alanine ligase; InterPro IPR003721:IPR004821; KEGG: rbi:RB2501_07970 putative pantoate--beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; SPTR: Pantothenate synthetase; TIGRFAM: Pantoate-beta-alanine ligase; Cytidyltransferase-related; pantothenate synthetase complement(1175607..1176455) Muricauda ruestringensis DSM 13258 11053896 YP_004787542.1 CDS Murru_1076 NC_015945.1 1176519 1177367 D PFAM: Starch synthase catalytic domain; COGs: COG0297 Glycogen synthase; InterPro IPR013534; KEGG: fbc:FB2170_07384 glycogen synthase-like protein; PFAM: Starch synthase, catalytic domain; PRIAM: Starch synthase; SPTR: Glycogen synthase-related protein; starch synthase 1176519..1177367 Muricauda ruestringensis DSM 13258 11053897 YP_004787543.1 CDS Murru_1077 NC_015945.1 1177373 1179181 D KEGG: fbc:FB2170_07389 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1177373..1179181 Muricauda ruestringensis DSM 13258 11053898 YP_004787544.1 CDS Murru_1078 NC_015945.1 1179306 1181153 D PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing); COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains; HAMAP: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; InterPro IPR000583:IPR001347:IPR005855; KEGG: fbc:FB2170_07394 glucosamine--fructose-6-phosphate aminotransferase; PFAM: Sugar isomerase (SIS); Glutamine amidotransferase, class-II; PRIAM: Glutamine--fructose-6-phosphate transaminase (isomerizing); SPTR: Glucosamine--fructose-6-phosphate aminotransferase; TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; glucosamine--fructose-6-phosphate aminotransferase 1179306..1181153 Muricauda ruestringensis DSM 13258 11053899 YP_004787545.1 CDS Murru_1079 NC_015945.1 1181362 1184148 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; InterPro IPR012910:IPR000531; KEGG: rbi:RB2501_07995 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; TonB-dependent receptor 1181362..1184148 Muricauda ruestringensis DSM 13258 11053900 YP_004787546.1 CDS Murru_1080 NC_015945.1 1184311 1185819 D PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATP synthase, F1 beta subunit; COGs: COG0055 F0F1-type ATP synthase beta subunit; HAMAP: ATPase, F1 complex, beta subunit; InterProIPR004100:IPR000194:IPR000793:IPR005722:IPR 003593; KEGG: fbc:FB2170_07404 ATP synthase subunit B; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP synthase subunit beta; TIGRFAM: ATPase, F1 complex, beta subunit; ATP synthase subunit beta 1184311..1185819 Muricauda ruestringensis DSM 13258 11053901 YP_004787547.1 CDS Murru_1081 NC_015945.1 1185847 1186125 D PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; COGs: COG0355 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit); InterPro IPR020546; KEGG: fbc:FB2170_07409 ATP synthase F1 subunit epsilon; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; SPTR: ATP synthase F1, epsilon subunit; ATPase F1 subunit delta/epsilon subunit 1185847..1186125 Muricauda ruestringensis DSM 13258 11053902 YP_004787548.1 CDS Murru_1082 NC_015945.1 1186387 1187745 D PFAM: ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA; COGs: COG1066 ATP-dependent serine protease; InterPro IPR004504:IPR003593; KEGG: fbc:FB2170_07359 putative DNA repair protein; SMART: ATPase, AAA+ type, core; SPTR: DNA repair protein radA; TIGRFAM: DNA repair protein RadA; DNA repair protein RadA 1186387..1187745 Muricauda ruestringensis DSM 13258 11053903 YP_004787549.1 CDS Murru_1083 NC_015945.1 1187963 1190119 D PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus; Cytochrome c; PQQ enzyme repeat; COGs: COG4993 Glucose dehydrogenase; InterPro IPR019551:IPR002372:IPR019556:IPR018391; KEGG: lby:Lbys_1799 quinoprotein glucose dehydrogenase; PFAM: PQQ-dependent enzyme, N-terminal; Pyrrolo-quinoline quinone repeat; PQQ-dependent enzyme, C-terminal; PRIAM: Quinoprotein glucose dehydrogenase; SPTR: PQQ-dependent enzyme-like protein; quinoprotein glucose dehydrogenase 1187963..1190119 Muricauda ruestringensis DSM 13258 11053904 YP_004787550.1 CDS Murru_1084 NC_015945.1 1190121 1191161 R PFAM: Aldo/keto reductase family; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR023210; KEGG: fbc:FB2170_07349 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain; SPTR: Aldo/keto reductase; NADP-dependent oxidoreductase domain-containing protein complement(1190121..1191161) Muricauda ruestringensis DSM 13258 11053905 YP_004787551.1 CDS Murru_1085 NC_015945.1 1191222 1191986 R PFAM: Endonuclease/Exonuclease/phosphatase family; TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III (xth); COGs: COG0708 Exonuclease III; InterPro IPR005135:IPR000097:IPR004808; KEGG: fbc:FB2170_07334 exodeoxyribonuclease; PFAM: Endonuclease/exonuclease/phosphatase; PRIAM: Exodeoxyribonuclease III; SPTR: Exodeoxyribonuclease; TIGRFAM: Exodeoxyribonuclease III xth; AP endonuclease, family 1; exodeoxyribonuclease III Xth complement(1191222..1191986) Muricauda ruestringensis DSM 13258 11053906 YP_004787552.1 CDS Murru_1086 NC_015945.1 1192122 1192676 D PFAM: Isochorismatase family; COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: ran:Riean_0018 isochorismatase hydrolase; PFAM: Isochorismatase-like; SPTR: Isochorismatase; isochorismatase hydrolase 1192122..1192676 Muricauda ruestringensis DSM 13258 11053907 YP_004787553.1 CDS Murru_1087 NC_015945.1 1192711 1193814 D PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: rbi:RB2501_03990 NADH-dependent dyhydrogenase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Putative oxidoreductase family, NAD-binding Rossmann fold protein; oxidoreductase domain-containing protein 1192711..1193814 Muricauda ruestringensis DSM 13258 11053908 YP_004787554.1 CDS Murru_1088 NC_015945.1 1193826 1195907 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG4772 Outer membrane receptor for Fe3+-dicitrate; InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_07314 paral putative outer membrane receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Paral putative outer membrane receptor; TonB-dependent receptor 1193826..1195907 Muricauda ruestringensis DSM 13258 11053909 YP_004787555.1 CDS Murru_1089 NC_015945.1 1195918 1196400 D PFAM: Bacterial transcription activator, effector binding domain; COGs: COG3708 conserved hypothetical protein; InterPro IPR010499; KEGG: fjo:Fjoh_2178 transcription activator, effector binding; PFAM: Bacterial transcription activator, effector binding; SMART: Bacterial transcription activator, effector binding; SPTR: Transcription activator, effector binding; transcription activator effector binding protein 1195918..1196400 Muricauda ruestringensis DSM 13258 11053910 YP_004787556.1 CDS Murru_1090 NC_015945.1 1196428 1196535 R hypothetical protein complement(1196428..1196535) Muricauda ruestringensis DSM 13258 11053911 YP_004787557.1 CDS Murru_1091 NC_015945.1 1196568 1196786 R hypothetical protein complement(1196568..1196786) Muricauda ruestringensis DSM 13258 11053912 YP_004787558.1 CDS Murru_1092 NC_015945.1 1196956 1197468 D PFAM: Protein of unknown function (DUF3124); KEGG: gfo:GFO_0139 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1196956..1197468 Muricauda ruestringensis DSM 13258 11053913 YP_004787559.1 CDS Murru_1093 NC_015945.1 1197573 1199240 D PFAM: Formate--tetrahydrofolate ligase; COGs: COG2759 Formyltetrahydrofolate synthetase; HAMAP: Formate-tetrahydrofolate ligase, FTHFS; InterPro IPR000559; KEGG: mtt:Ftrac_2297 formate-tetrahydrofolate ligase; PFAM: Formate-tetrahydrofolate ligase, FTHFS; PRIAM: Formate--tetrahydrofolate ligase; SPTR: Formate--tetrahydrofolate ligase; Formate--tetrahydrofolate ligase 1197573..1199240 Muricauda ruestringensis DSM 13258 11053914 YP_004787560.1 CDS Murru_1094 NC_015945.1 1199244 1200785 R PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: glycyl-tRNA synthetase, dimeric type; COGs: COG0423 Glycyl-tRNA synthetase (class II); InterPro IPR002314:IPR004154:IPR002315; KEGG: fbc:FB2170_07245 glycyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Anticodon-binding; SPTR: Glycyl-tRNA synthetase; TIGRFAM: Glycyl-tRNA synthetase, alpha2 dimer; glycyl-tRNA synthetase complement(1199244..1200785) Muricauda ruestringensis DSM 13258 11053915 YP_004787561.1 CDS Murru_1095 NC_015945.1 1200822 1201718 R KEGG: rbi:RB2501_07920 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1200822..1201718) Muricauda ruestringensis DSM 13258 11053916 YP_004787562.1 CDS Murru_1096 NC_015945.1 1201753 1202463 D PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein; COGs: COG1040 amidophosphoribosyltransferase; KEGG: fbc:FB2170_07235 putative amidophosphoribosyl-transferase; SPTR: Putative amidophosphoribosyl-transferase; putative amidophosphoribosyl-transferase 1201753..1202463 Muricauda ruestringensis DSM 13258 11053917 YP_004787563.1 CDS Murru_1097 NC_015945.1 1202529 1204148 D KEGG: fbc:FB2170_07230 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1202529..1204148 Muricauda ruestringensis DSM 13258 11053918 YP_004787564.1 CDS Murru_1098 NC_015945.1 1204132 1204908 R PFAM: Carbon-nitrogen hydrolase; COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: fbc:FB2170_07225 putative amidohydrolase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Putative amidohydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(1204132..1204908) Muricauda ruestringensis DSM 13258 11053919 YP_004787565.1 CDS Murru_1099 NC_015945.1 1204909 1205385 R PFAM: Ankyrin repeat; COGs: COG0666 FOG: Ankyrin repeat; InterPro IPR002110; KEGG: rbi:RB2501_07900 hypothetical protein; PFAM: Ankyrin repeat; SPTR: Putative uncharacterized protein; ankyrin complement(1204909..1205385) Muricauda ruestringensis DSM 13258 11053920 YP_004787566.1 CDS Murru_1100 NC_015945.1 1205489 1207714 R PFAM: Peroxidase; TIGRFAM: catalase/peroxidase HPI; COGs: COG0376 Catalase (peroxidase I); HAMAP: Catalase-peroxidase haem; InterPro IPR002016:IPR000763; KEGG: avn:Avin_05880 heme catalase/peroxidase HPI; PFAM: Haem peroxidase, plant/fungal/bacterial; PRIAM: Catalase; SPTR: Catalase-peroxidase; TIGRFAM: Catalase-peroxidase haem; catalase complement(1205489..1207714) Muricauda ruestringensis DSM 13258 11053921 YP_004787567.1 CDS Murru_1101 NC_015945.1 1207993 1208607 D PFAM: Protein of unknown function (DUF664); KEGG: fbc:FB2170_07210 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1207993..1208607 Muricauda ruestringensis DSM 13258 11053922 YP_004787568.1 CDS Murru_1102 NC_015945.1 1208654 1209235 D KEGG: gfo:GFO_3003 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1208654..1209235 Muricauda ruestringensis DSM 13258 11053923 YP_004787569.1 CDS Murru_1103 NC_015945.1 1209290 1209787 R hypothetical protein complement(1209290..1209787) Muricauda ruestringensis DSM 13258 11053924 YP_004787570.1 CDS Murru_1104 NC_015945.1 1209867 1210346 R hypothetical protein complement(1209867..1210346) Muricauda ruestringensis DSM 13258 11053925 YP_004787571.1 CDS Murru_1105 NC_015945.1 1210300 1211703 R SPTR: Putative uncharacterized protein; hypothetical protein complement(1210300..1211703) Muricauda ruestringensis DSM 13258 11053926 YP_004787572.1 CDS Murru_1106 NC_015945.1 1211723 1212037 R hypothetical protein complement(1211723..1212037) Muricauda ruestringensis DSM 13258 11053927 YP_004787573.1 CDS Murru_1107 NC_015945.1 1212194 1213558 R KEGG: rbi:RB2501_07895 extracellular nuclease; SPTR: Extracellular nuclease; extracellular nuclease complement(1212194..1213558) Muricauda ruestringensis DSM 13258 11053928 YP_004787574.1 CDS Murru_1108 NC_015945.1 1213570 1216305 R PFAM: TonB-dependent Receptor Plug Domain; KEGG: coc:Coch_0578 TonB-dependent receptor; SPTR: TonB-dependent receptor; TonB-dependent receptor complement(1213570..1216305) Muricauda ruestringensis DSM 13258 11053929 YP_004787575.1 CDS Murru_1109 NC_015945.1 1216407 1217444 D PFAM: Endonuclease/Exonuclease/phosphatase family; InterPro IPR005135; KEGG: fbc:FB2170_07175 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Putative uncharacterized protein; endonuclease/exonuclease/phosphatase 1216407..1217444 Muricauda ruestringensis DSM 13258 11053930 YP_004787576.1 CDS Murru_1110 NC_015945.1 1217472 1217909 R KEGG: fbc:FB2170_07165 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1217472..1217909) Muricauda ruestringensis DSM 13258 11053931 YP_004787577.1 CDS Murru_1111 NC_015945.1 1218008 1220656 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531:IPR017690; KEGG: rbi:RB2501_07870 putative TonB-dependent outer membrane receptor protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Putative TonB-dependent outer membrane receptor protein; TIGRFAM: Outer membrane insertion C-terminal signal, omp85; outer membrane insertion C-terminal signal protein complement(1218008..1220656) Muricauda ruestringensis DSM 13258 11053932 YP_004787578.1 CDS Murru_1112 NC_015945.1 1220829 1222466 R PFAM: Phosphoglucose isomerase; COGs: COG0166 Glucose-6-phosphate isomerase; HAMAP: Phosphoglucose isomerase (PGI); InterPro IPR001672; KEGG: fbc:FB2170_07155 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI); PRIAM: Glucose-6-phosphate isomerase; SPTR: Glucose-6-phosphate isomerase; glucose-6-phosphate isomerase complement(1220829..1222466) Muricauda ruestringensis DSM 13258 11053933 YP_004787579.1 CDS Murru_1113 NC_015945.1 1222466 1223749 R PFAM: Peptidase family M23; COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: fbc:FB2170_07150 peptidase, M23/M37 family protein; PFAM: Peptidase M23; SPTR: Peptidase, M23/M37 family protein; peptidase M23 complement(1222466..1223749) Muricauda ruestringensis DSM 13258 11053934 YP_004787580.1 CDS Murru_1114 NC_015945.1 1223758 1224732 R PFAM: Tryptophan 2,3-dioxygenase; COGs: COG3483 Tryptophan 2 3-dioxygenase (vermilion); InterPro IPR004981; KEGG: rbi:RB2501_07855 tryptophan 2,3-dioxygenase; PFAM: Tryptophan 2,3-dioxygenase; SPTR: Tryptophan 2,3-dioxygenase; tryptophan 23-dioxygenase complement(1223758..1224732) Muricauda ruestringensis DSM 13258 11053935 YP_004787581.1 CDS Murru_1115 NC_015945.1 1224744 1225526 R PFAM: Protein of unknown function (DUF3108); KEGG: fbc:FB2170_07145 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1224744..1225526) Muricauda ruestringensis DSM 13258 11053936 YP_004787582.1 CDS Murru_1116 NC_015945.1 1225863 1228130 R PFAM: Patatin-like phospholipase; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641:IPR010827; KEGG: rbi:RB2501_07835 putative patatin-like phospholipase; PFAM: Patatin/Phospholipase A2-related; Surface antigen variable number; SPTR: Putative patatin-like phospholipase; patatin complement(1225863..1228130) Muricauda ruestringensis DSM 13258 11053937 YP_004787583.1 CDS Murru_1117 NC_015945.1 1228134 1229927 R PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit; COGs: COG0322 Nuclease subunit of the excinuclease complex; HAMAP: Excinuclease ABC, C subunit; InterPro IPR000305:IPR001943:IPR001162:IPR004791; KEGG: fbc:FB2170_07130 excinuclease ABC subunit C; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; SMART: Excinuclease ABC, C subunit, N-terminal; SPTR: UvrABC system protein C; TIGRFAM: Excinuclease ABC, C subunit; UvrABC system protein C complement(1228134..1229927) Muricauda ruestringensis DSM 13258 11053938 YP_004787584.1 CDS Murru_1118 NC_015945.1 1230268 1230360 D hypothetical protein 1230268..1230360 Muricauda ruestringensis DSM 13258 11053939 YP_004787585.1 CDS Murru_1119 NC_015945.1 1230404 1230967 D PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase; COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: zpr:ZPR_0180 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 1230404..1230967 Muricauda ruestringensis DSM 13258 11053940 YP_004787586.1 CDS Murru_1120 NC_015945.1 1230955 1231605 R PFAM: Signal peptidase (SPase) II; COGs: COG0597 Lipoprotein signal peptidase; HAMAP: Peptidase A8, signal peptidase II; InterPro IPR001872; KEGG: fbc:FB2170_07120 putative signal peptidase; PFAM: Peptidase A8, signal peptidase II; SPTR: Lipoprotein signal peptidase 1; lipoprotein signal peptidase complement(1230955..1231605) Muricauda ruestringensis DSM 13258 11053941 YP_004787587.1 CDS Murru_1121 NC_015945.1 1231639 1232259 R KEGG: fbc:FB2170_07115 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1231639..1232259) Muricauda ruestringensis DSM 13258 11053942 YP_004787588.1 CDS Murru_1122 NC_015945.1 1232288 1232671 R PFAM: Prokaryotic dksA/traR C4-type zinc finger; KEGG: rbi:RB2501_07805 putative regulatory protein; SPTR: Putative regulatory protein; putative regulatory protein complement(1232288..1232671) Muricauda ruestringensis DSM 13258 11053943 YP_004787589.1 CDS Murru_1123 NC_015945.1 1232675 1236076 R PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: isoleucyl-tRNA synthetase; COGs: COG0060 Isoleucyl-tRNA synthetase; HAMAP: Isoleucyl-tRNA synthetase, class Ia; InterPro IPR002300:IPR013155:IPR002301; KEGG: fbc:FB2170_07105 isoleucyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; PRIAM: Isoleucine--tRNA ligase; SPTR: Isoleucyl-tRNA synthetase; TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; isoleucyl-tRNA synthetase complement(1232675..1236076) Muricauda ruestringensis DSM 13258 11053944 YP_004787590.1 CDS Murru_1124 NC_015945.1 1236257 1236550 D InterPro IPR012556; KEGG: rbi:RB2501_07795 hypothetical protein; PFAM: Entericidin EcnAB; SPTR: Putative uncharacterized protein; entericidin EcnAB 1236257..1236550 Muricauda ruestringensis DSM 13258 11053945 YP_004787591.1 CDS Murru_1125 NC_015945.1 1236728 1239148 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_07095 hypothetical protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Putative uncharacterized protein; TonB-dependent receptor complement(1236728..1239148) Muricauda ruestringensis DSM 13258 11053946 YP_004787592.1 CDS Murru_1126 NC_015945.1 1239151 1239870 R PFAM: Recombination protein O C terminal; Recombination protein O N terminal; TIGRFAM: DNA repair protein RecO; COGs: COG1381 Recombinational DNA repair protein (RecF pathway); HAMAP: Recombination protein O, RecO; InterPro IPR003717; KEGG: fbc:FB2170_07090 DNA repair protein; PFAM: Recombination protein O, RecO; SPTR: DNA repair protein recO; TIGRFAM: Recombination protein O, RecO; DNA repair protein recO complement(1239151..1239870) Muricauda ruestringensis DSM 13258 11053947 YP_004787593.1 CDS Murru_1127 NC_015945.1 1239956 1241296 R PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097:IPR006096; KEGG: rbi:RB2501_07780 glutamate dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; PRIAM: Glutamate dehydrogenase (NADP(+)); SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; SPTR: Glutamate dehydrogenase; manually curated; glutamate dehydrogenase (NADP(+)) complement(1239956..1241296) Muricauda ruestringensis DSM 13258 11053948 YP_004787594.1 CDS Murru_1128 NC_015945.1 1241425 1242600 R PFAM: Cys/Met metabolism PLP-dependent enzyme; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: fbc:FB2170_07025 Cys/Met metabolism PLP-dependent enzyme superfamily protein; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cystathionine gamma-lyase; SPTR: Cys/Met metabolism PLP-dependent enzyme superfamily protein; cystathionine gamma-synthase complement(1241425..1242600) Muricauda ruestringensis DSM 13258 11053949 YP_004787595.1 CDS Murru_1129 NC_015945.1 1242666 1243406 D PFAM: Protein of unknown function (DUF3298); KEGG: fbc:FB2170_07020 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1242666..1243406 Muricauda ruestringensis DSM 13258 11053950 YP_004787596.1 CDS Murru_1130 NC_015945.1 1243403 1243870 R KEGG: fbc:FB2170_07015 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1243403..1243870) Muricauda ruestringensis DSM 13258 11053951 YP_004787597.1 CDS Murru_1131 NC_015945.1 1244045 1244398 D PFAM: ArsC family; COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006660; KEGG: fbc:FB2170_06980 hypothetical protein; PFAM: Arsenate reductase-like; SPTR: Putative uncharacterized protein; arsenate reductase 1244045..1244398 Muricauda ruestringensis DSM 13258 11053952 YP_004787598.1 CDS Murru_1132 NC_015945.1 1244395 1245288 D PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: rbi:RB2501_07760 hypothetical protein; PFAM: Drug/metabolite transporter; SPTR: Putative uncharacterized protein; hypothetical protein 1244395..1245288 Muricauda ruestringensis DSM 13258 11053953 YP_004787599.1 CDS Murru_1133 NC_015945.1 1245713 1246288 D PFAM: Thioredoxin; KEGG: zpr:ZPR_0960 thioredoxin-like protein; SPTR: Thioredoxin-like protein; hypothetical protein 1245713..1246288 Muricauda ruestringensis DSM 13258 11053954 YP_004787600.1 CDS Murru_1134 NC_015945.1 1246318 1246518 D hypothetical protein 1246318..1246518 Muricauda ruestringensis DSM 13258 11053955 YP_004787601.1 CDS Murru_1135 NC_015945.1 1246602 1247300 D PFAM: Protein of unknown function (Porph_ging); InterPro IPR019115; KEGG: fps:FP0331 hypothetical protein; PFAM: Uncharacterised protein family, bacteroidetes; SPTR: Putative uncharacterized protein; hypothetical protein 1246602..1247300 Muricauda ruestringensis DSM 13258 11053956 YP_004787602.1 CDS Murru_1136 NC_015945.1 1247297 1249969 D KEGG: zpr:ZPR_0173 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1247297..1249969 Muricauda ruestringensis DSM 13258 11053957 YP_004787603.1 CDS Murru_1137 NC_015945.1 1250111 1250593 R PFAM: Acyl-ACP thioesterase; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; COGs: COG0824 thioesterase; KEGG: fbc:FB2170_06965 hypothetical protein; SPTR: Thioesterase-like protein; hypothetical protein complement(1250111..1250593) Muricauda ruestringensis DSM 13258 11053958 YP_004787604.1 CDS Murru_1138 NC_015945.1 1250711 1251688 D PFAM: 2-nitropropane dioxygenase; COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136; KEGG: fbc:FB2170_06960 2-nitropropane dioxygenase family protein; PFAM: 2-nitropropane dioxygenase, NPD; SPTR: 2-nitropropane dioxygenase family protein; 2-nitropropane dioxygenase 1250711..1251688 Muricauda ruestringensis DSM 13258 11053959 YP_004787605.1 CDS Murru_1139 NC_015945.1 1251711 1252670 D PFAM: alpha/beta hydrolase fold; COGs: COG0429 hydrolase of the alpha/beta-hydrolase fold; InterPro IPR000073; KEGG: fbc:FB2170_06950 hypothetical protein; PFAM: Alpha/beta hydrolase fold-1; SPTR: Putative uncharacterized protein; alpha/beta hydrolase fold protein 1251711..1252670 Muricauda ruestringensis DSM 13258 11053960 YP_004787606.1 CDS Murru_1140 NC_015945.1 1252803 1253267 D PFAM: Cytochrome c; InterPro IPR003088; KEGG: fbc:FB2170_06945 mulitcopper oxidase domain-containing protein; PFAM: Cytochrome c, class I; SPTR: Mulitcopper oxidase domain protein; cytochrome c class I 1252803..1253267 Muricauda ruestringensis DSM 13258 11053961 YP_004787607.1 CDS Murru_1141 NC_015945.1 1253350 1254057 D KEGG: mtt:Ftrac_2749 membrane or secreted protein; SPTR: Putative uncharacterized protein; membrane or secreted protein 1253350..1254057 Muricauda ruestringensis DSM 13258 11053962 YP_004787608.1 CDS Murru_1142 NC_015945.1 1254123 1254674 D PFAM: RibD C-terminal domain; COGs: COG0262 Dihydrofolate reductase; InterPro IPR002734; KEGG: phe:Phep_0878 bifunctional deaminase-reductase domain protein; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; SPTR: Bifunctional deaminase-reductase domain protein; bifunctional deaminase-reductase domain-containing protein 1254123..1254674 Muricauda ruestringensis DSM 13258 11053963 YP_004787609.1 CDS Murru_1143 NC_015945.1 1254857 1255276 D PFAM: META domain; InterPro IPR005184; KEGG: fjo:Fjoh_0275 protein of unknown function DUF306, MetA and HslJ; PFAM: Domain of unknown function DUF306, Meta/HslJ; SPTR: Putative uncharacterized protein; hypothetical protein 1254857..1255276 Muricauda ruestringensis DSM 13258 11053964 YP_004787610.1 CDS Murru_1144 NC_015945.1 1255273 1256097 D PFAM: META domain; COGs: COG3187 Heat shock protein; InterPro IPR005184; KEGG: fjo:Fjoh_4623 protein of unknown function DUF306, MetA and HslJ; PFAM: Domain of unknown function DUF306, Meta/HslJ; SPTR: Putative uncharacterized protein; hypothetical protein 1255273..1256097 Muricauda ruestringensis DSM 13258 11053965 YP_004787611.1 CDS Murru_1145 NC_015945.1 1256100 1256696 D PFAM: DinB family; KEGG: fbc:FB2170_02190 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1256100..1256696 Muricauda ruestringensis DSM 13258 11053966 YP_004787612.1 CDS Murru_1146 NC_015945.1 1256808 1257767 R KEGG: fbc:FB2170_06895 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1256808..1257767) Muricauda ruestringensis DSM 13258 11053967 YP_004787613.1 CDS Murru_1147 NC_015945.1 1257853 1258854 D PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; COGs: COG0240 Glycerol-3-phosphate dehydrogenase; InterPro IPR011128:IPR006109; KEGG: cat:CA2559_02220 glycerol-3-phosphate dehydrogenase; PFAM: Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal; Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal; PRIAM: Glycerol-3-phosphate dehydrogenase (NAD(P)(+)); SPTR: Glycerol-3-phosphate dehydrogenase; glycerol-3-phosphate dehydrogenase 1257853..1258854 Muricauda ruestringensis DSM 13258 11053968 YP_004787614.1 CDS Murru_1148 NC_015945.1 1258863 1259501 R SPTR: Putative uncharacterized protein; hypothetical protein complement(1258863..1259501) Muricauda ruestringensis DSM 13258 11053969 YP_004787615.1 CDS Murru_1149 NC_015945.1 1259531 1262212 R KEGG: zpr:ZPR_0173 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1259531..1262212) Muricauda ruestringensis DSM 13258 11053970 YP_004787616.1 CDS Murru_1150 NC_015945.1 1262254 1263015 R PFAM: Protein of unknown function (Porph_ging); InterPro IPR019115; KEGG: zpr:ZPR_0166 hypothetical protein; PFAM: Uncharacterised protein family, bacteroidetes; SPTR: Putative uncharacterized protein; hypothetical protein complement(1262254..1263015) Muricauda ruestringensis DSM 13258 11053971 YP_004787617.1 CDS Murru_1151 NC_015945.1 1263142 1263342 R hypothetical protein complement(1263142..1263342) Muricauda ruestringensis DSM 13258 11053972 YP_004787618.1 CDS Murru_1152 NC_015945.1 1263438 1263545 D hypothetical protein 1263438..1263545 Muricauda ruestringensis DSM 13258 11053973 YP_004787619.1 CDS Murru_1153 NC_015945.1 1263664 1264368 R PFAM: Protein of unknown function (Porph_ging); InterPro IPR019115; KEGG: zpr:ZPR_0171 hypothetical protein; PFAM: Uncharacterised protein family, bacteroidetes; SPTR: Putative uncharacterized protein; hypothetical protein complement(1263664..1264368) Muricauda ruestringensis DSM 13258 11053974 YP_004787620.1 CDS Murru_1154 NC_015945.1 1264383 1265021 R PFAM: Protein of unknown function (Porph_ging); InterPro IPR019115; KEGG: fps:FP0266 hypothetical protein; PFAM: Uncharacterised protein family, bacteroidetes; SPTR: Putative uncharacterized protein; hypothetical protein complement(1264383..1265021) Muricauda ruestringensis DSM 13258 11053975 YP_004787621.1 CDS Murru_1155 NC_015945.1 1265071 1265163 R hypothetical protein complement(1265071..1265163) Muricauda ruestringensis DSM 13258 11053976 YP_004787622.1 CDS Murru_1156 NC_015945.1 1265187 1265399 R hypothetical protein complement(1265187..1265399) Muricauda ruestringensis DSM 13258 11053977 YP_004787623.1 CDS Murru_1157 NC_015945.1 1265497 1265607 D hypothetical protein 1265497..1265607 Muricauda ruestringensis DSM 13258 11053978 YP_004787624.1 CDS Murru_1158 NC_015945.1 1265629 1266348 R PFAM: Protein of unknown function (Porph_ging); InterPro IPR019115; KEGG: zpr:ZPR_0171 hypothetical protein; PFAM: Uncharacterised protein family, bacteroidetes; SPTR: Putative uncharacterized protein; hypothetical protein complement(1265629..1266348) Muricauda ruestringensis DSM 13258 11053979 YP_004787625.1 CDS Murru_1159 NC_015945.1 1266408 1266608 R hypothetical protein complement(1266408..1266608) Muricauda ruestringensis DSM 13258 11053980 YP_004787626.1 CDS Murru_1160 NC_015945.1 1266891 1268558 R PFAM: FAD dependent oxidoreductase; COGs: COG0578 Glycerol-3-phosphate dehydrogenase; InterPro IPR006076; KEGG: fbc:FB2170_06880 GlpD; PFAM: FAD dependent oxidoreductase; PRIAM: Glycerol-3-phosphate dehydrogenase; SPTR: GlpD; glycerol-3-phosphate dehydrogenase complement(1266891..1268558) Muricauda ruestringensis DSM 13258 11053981 YP_004787627.1 CDS Murru_1161 NC_015945.1 1268562 1268870 R PFAM: Antibiotic biosynthesis monooxygenase; COGs: COG2329 Uncharacterized protein involved in biosynthesis of extracellular polysaccharides; InterPro IPR007138; KEGG: fbc:FB2170_06865 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Putative uncharacterized protein; antibiotic biosynthesis monooxygenase complement(1268562..1268870) Muricauda ruestringensis DSM 13258 11053982 YP_004787628.1 CDS Murru_1162 NC_015945.1 1268871 1269227 R KEGG: fbc:FB2170_06860 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1268871..1269227) Muricauda ruestringensis DSM 13258 11053983 YP_004787629.1 CDS Murru_1163 NC_015945.1 1269288 1269818 D PFAM: Colicin V production protein; InterPro IPR003825; KEGG: fbc:FB2170_06855 hypothetical protein; PFAM: Colicin V production, CvpA; SPTR: Putative uncharacterized protein; colicin V production protein 1269288..1269818 Muricauda ruestringensis DSM 13258 11053984 YP_004787630.1 CDS Murru_1164 NC_015945.1 1270007 1270519 D PFAM: Cysteine-rich secretory protein family; COGs: COG2340 Uncharacterized protein with SCP/PR1 domains; InterPro IPR014044; KEGG: fbc:FB2170_06830 allergen V5/TPX-1 related protein; PFAM: CAP domain; SPTR: Allergen V5/Tpx-1 related protein; hypothetical protein 1270007..1270519 Muricauda ruestringensis DSM 13258 11053985 YP_004787631.1 CDS Murru_1165 NC_015945.1 1270625 1271167 D PFAM: 3-hydroxyanthranilic acid dioxygenase; TIGRFAM: 3-hydroxyanthranilate 3,4-dioxygenase; InterPro IPR010329; KEGG: fbc:FB2170_06825 3-hydroxyanthranilate 3,4-dioxygenase; PFAM: 3-hydroxyanthranilic acid dioxygenase; PRIAM: 3-hydroxyanthranilate 3,4-dioxygenase; SPTR: 3-hydroxyanthranilate 3,4-dioxygenase; TIGRFAM: 3-hydroxyanthranilic acid dioxygenase; 3-hydroxyanthranilate 3,4-dioxygenase 1270625..1271167 Muricauda ruestringensis DSM 13258 11053986 YP_004787632.1 CDS Murru_1166 NC_015945.1 1271164 1271538 D PFAM: Protein of unknown function (DUF1304); COGs: COG3759 membrane protein; InterPro IPR009732; KEGG: fbc:FB2170_06820 hypothetical protein; PFAM: Protein of unknown function DUF1304; SPTR: Putative uncharacterized protein; hypothetical protein 1271164..1271538 Muricauda ruestringensis DSM 13258 11053987 YP_004787633.1 CDS Murru_1167 NC_015945.1 1271609 1273162 D PFAM: Aldehyde dehydrogenase family; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: zpr:ZPR_0298 aldehyde dehydrogenase family protein; PFAM: Aldehyde dehydrogenase domain; PRIAM: L-aminoadipate-semialdehyde dehydrogenase; SPTR: Aldehyde dehydrogenase family protein; L-aminoadipate-semialdehyde dehydrogenase 1271609..1273162 Muricauda ruestringensis DSM 13258 11053988 YP_004787634.1 CDS Murru_1168 NC_015945.1 1273256 1273372 D hypothetical protein 1273256..1273372 Muricauda ruestringensis DSM 13258 11053989 YP_004787635.1 CDS Murru_1169 NC_015945.1 1273547 1274083 D KEGG: rbi:RB2501_07680 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1273547..1274083 Muricauda ruestringensis DSM 13258 11053990 YP_004787636.1 CDS Murru_1170 NC_015945.1 1274111 1275106 R PFAM: Fatty acid desaturase; InterPro IPR005067; KEGG: fbc:FB2170_06790 putative acyl-[acyl-carrier protein] desaturase; PFAM: Fatty acid desaturase, type 2; PRIAM: Acyl-[acyl-carrier-protein] desaturase; SPTR: Putative acyl-[acyl-carrier protein] desaturase; acyl-(acyl-carrier-protein) desaturase complement(1274111..1275106) Muricauda ruestringensis DSM 13258 11053991 YP_004787637.1 CDS Murru_1171 NC_015945.1 1275152 1275877 R PFAM: Calcineurin-like phosphoesterase; InterPro IPR004843; KEGG: fbc:FB2170_06785 serine/threonine protein phosphatase; PFAM: Metallo-dependent phosphatase; SPTR: Serine/threonine protein phosphatase; metallophosphoesterase complement(1275152..1275877) Muricauda ruestringensis DSM 13258 11053992 YP_004787638.1 CDS Murru_1172 NC_015945.1 1276030 1276974 D PFAM: pfkB family carbohydrate kinase; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: fbc:FB2170_06765 fructokinase; PFAM: Carbohydrate/purine kinase; PRIAM: Fructokinase; SPTR: Fructokinase; fructokinase 1276030..1276974 Muricauda ruestringensis DSM 13258 11053993 YP_004787639.1 CDS Murru_1173 NC_015945.1 1276988 1278124 R PFAM: Divergent AAA domain; InterPro IPR007421; KEGG: fbc:FB2170_06735 hypothetical protein; PFAM: ATPase, AAA-4; SPTR: Putative uncharacterized protein; AAA ATPase complement(1276988..1278124) Muricauda ruestringensis DSM 13258 11053994 YP_004787640.1 CDS Murru_1174 NC_015945.1 1278121 1278876 R PFAM: short chain dehydrogenase; COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: fbc:FB2170_06730 short chain dehydrogenase/reductase family oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: Serine 3-dehydrogenase; SPTR: Oxidoreductase, short chain dehydrogenase/reductase family protein; serine 3-dehydrogenase complement(1278121..1278876) Muricauda ruestringensis DSM 13258 11053995 YP_004787641.1 CDS Murru_1175 NC_015945.1 1278887 1279759 R PFAM: Aldo/keto reductase family; COGs: COG4989 oxidoreductase; InterPro IPR023210; KEGG: fbc:FB2170_06725 hypothetical protein; PFAM: NADP-dependent oxidoreductase domain; SPTR: Putative uncharacterized protein; NADP-dependent oxidoreductase domain-containing protein complement(1278887..1279759) Muricauda ruestringensis DSM 13258 11053996 YP_004787642.1 CDS Murru_1176 NC_015945.1 1279919 1280920 D PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0714 MoxR-like ATPase; InterPro IPR011703; KEGG: fbc:FB2170_06720 putative magnesium chelatase; PFAM: ATPase, AAA-3; SPTR: Putative magnesium chelatase; ATPase 1279919..1280920 Muricauda ruestringensis DSM 13258 11053997 YP_004787643.1 CDS Murru_1177 NC_015945.1 1280990 1281856 D PFAM: Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881:IPR002035; KEGG: fbc:FB2170_06715 hypothetical protein; PFAM: Domain of unknown function DUF58; von Willebrand factor, type A; SPTR: Putative uncharacterized protein; hypothetical protein 1280990..1281856 Muricauda ruestringensis DSM 13258 11053998 YP_004787644.1 CDS Murru_1178 NC_015945.1 1281856 1283517 D KEGG: fbc:FB2170_06710 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1281856..1283517 Muricauda ruestringensis DSM 13258 11053999 YP_004787645.1 CDS Murru_1179 NC_015945.1 1283518 1284516 D PFAM: von Willebrand factor type A domain; InterPro IPR002035; KEGG: fbc:FB2170_06705 BatA protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: BatA protein; von Willebrand factor type A 1283518..1284516 Muricauda ruestringensis DSM 13258 11054000 YP_004787646.1 CDS Murru_1180 NC_015945.1 1284520 1285566 D PFAM: von Willebrand factor type A domain; InterPro IPR002035; KEGG: fbc:FB2170_06700 aerotolerance-related membrane protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: Aerotolerance-related membrane protein; von Willebrand factor type A 1284520..1285566 Muricauda ruestringensis DSM 13258 11054001 YP_004787647.1 CDS Murru_1181 NC_015945.1 1285559 1286452 D PFAM: Tetratricopeptide repeat; InterPro IPR001440:IPR019734; KEGG: fbc:FB2170_06695 aerotolerance-related exported protein; PFAM: Tetratricopeptide TPR-1; SPTR: Aerotolerance-related exported protein; hypothetical protein 1285559..1286452 Muricauda ruestringensis DSM 13258 11054002 YP_004787648.1 CDS Murru_1182 NC_015945.1 1286452 1288245 D KEGG: fbc:FB2170_06690 aerotolerance-related exported protein; SPTR: Aerotolerance-related exported protein; aerotolerance-related exported protein 1286452..1288245 Muricauda ruestringensis DSM 13258 11054003 YP_004787649.1 CDS Murru_1183 NC_015945.1 1288242 1289006 D PFAM: Tetratricopeptide repeat; Bacterial SH3 domain; InterPro IPR001440:IPR013247:IPR019734:IPR003646; KEGG: fbc:FB2170_06685 TRP domain-containing protein BatE; PFAM: Tetratricopeptide TPR-1; SH3, type 3; SMART: SH3-like domain, bacterial; Tetratricopeptide repeat; SPTR: BatE, TRP domain containing protein; hypothetical protein 1288242..1289006 Muricauda ruestringensis DSM 13258 11054004 YP_004787650.1 CDS Murru_1184 NC_015945.1 1289064 1289372 D hypothetical protein 1289064..1289372 Muricauda ruestringensis DSM 13258 11054005 YP_004787651.1 CDS Murru_1185 NC_015945.1 1289459 1291042 D PFAM: Sulfate transporter family; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547; KEGG: rbi:RB2501_07590 sulfate transporter; PFAM: Sulphate transporter; SPTR: Sulfate transporter; sulfate transporter 1289459..1291042 Muricauda ruestringensis DSM 13258 11054006 YP_004787652.1 CDS Murru_1186 NC_015945.1 1291054 1291680 D PFAM: Carbonic anhydrase; COGs: COG0288 Carbonic anhydrase; InterPro IPR001765; KEGG: rbi:RB2501_07585 carbonic anhydrase; PFAM: Carbonic anhydrase; SMART: Carbonic anhydrase; SPTR: Prokaryotic-type carbonic anhydrase; carbonic anhydrase 1291054..1291680 Muricauda ruestringensis DSM 13258 11054007 YP_004787653.1 CDS Murru_1187 NC_015945.1 1291783 1293636 D PFAM: Sulfate transporter family; STAS domain; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547:IPR002645; KEGG: rbi:RB2501_07580 putative sulfate permease; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Probable sulfate permease; sulfate transporter 1291783..1293636 Muricauda ruestringensis DSM 13258 11054008 YP_004787654.1 CDS Murru_1188 NC_015945.1 1293649 1294341 D PFAM: Alkaline phytoceramidase (aPHC); KEGG: gfo:GFO_3423 membrane protein; SPTR: Membrane protein; membrane protein 1293649..1294341 Muricauda ruestringensis DSM 13258 11054009 YP_004787655.1 CDS Murru_1189 NC_015945.1 1294334 1295353 D PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain 1, bacterial; InterPro IPR004188:IPR002319:IPR004529:IPR022911; KEGG: fbc:FB2170_06665 phenylalanyl-tRNA synthetase subunit alpha; PFAM: Phenylalanyl-tRNA synthetase; Phenylalanyl-tRNA synthetase, class II, N-terminal; SPTR: Phenylalanyl-tRNA synthetase alpha chain; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 1294334..1295353 Muricauda ruestringensis DSM 13258 11054010 YP_004787656.1 CDS Murru_1190 NC_015945.1 1295362 1295760 D KEGG: fbc:FB2170_06660 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1295362..1295760 Muricauda ruestringensis DSM 13258 11054011 YP_004787657.1 CDS Murru_1191 NC_015945.1 1295864 1296343 D KEGG: zpr:ZPR_0294 transcriptional regulator; SPTR: Transcriptional regulator; transcriptional regulator 1295864..1296343 Muricauda ruestringensis DSM 13258 11054012 YP_004787658.1 CDS Murru_1192 NC_015945.1 1296336 1297472 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: gfo:GFO_3397 HlyD family secretion protein; PFAM: Secretion protein HlyD; SPTR: HlyD family secretion protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 1296336..1297472 Muricauda ruestringensis DSM 13258 11054013 YP_004787659.1 CDS Murru_1193 NC_015945.1 1297505 1300648 D PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036:IPR004764; KEGG: gfo:GFO_3396 AcrB/AcrD/AcrF family membrane transporter; PFAM: Acriflavin resistance protein; SPTR: AcrB/AcrD/AcrF family membrane transport protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 1297505..1300648 Muricauda ruestringensis DSM 13258 11054014 YP_004787660.1 CDS Murru_1194 NC_015945.1 1300668 1302068 D PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR003423:IPR010131; KEGG: zpr:ZPR_0291 OprM-like outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Putative outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein 1300668..1302068 Muricauda ruestringensis DSM 13258 11054015 YP_004787661.1 CDS Murru_1195 NC_015945.1 1302085 1302687 D PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: cat:CA2559_10053 putative TetR transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Putative TetR transcriptional regulator; regulatory protein TetR 1302085..1302687 Muricauda ruestringensis DSM 13258 11054016 YP_004787662.1 CDS Murru_1196 NC_015945.1 1302862 1304157 D PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidase, hydantoinase/carbamoylase family; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650:IPR010158; KEGG: rbi:RB2501_12582 N-carbamoyl-L-amino acid amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; PRIAM: N-carbamoyl-L-amino-acid hydrolase; SPTR: N-carbamoyl-L-amino acid amidohydrolase; TIGRFAM: Amidase, hydantoinase/carbamoylase; amidase 1302862..1304157 Muricauda ruestringensis DSM 13258 11054017 YP_004787663.1 CDS Murru_1197 NC_015945.1 1304196 1304486 R PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: gfo:GFO_0945 HTH_3 family transcriptional regulator protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: HTH_3 family transcriptional regulator protein; helix-turn-helix domain-containing protein complement(1304196..1304486) Muricauda ruestringensis DSM 13258 11054018 YP_004787664.1 CDS Murru_1199 NC_015945.1 1304879 1305577 R PFAM: YhhN-like protein; COGs: COG3714 membrane protein; InterPro IPR012506; KEGG: ppr:PBPRA0147 hypothetical protein; PFAM: YhhN-like; SPTR: YhhN-like protein; hypothetical protein complement(1304879..1305577) Muricauda ruestringensis DSM 13258 11054020 YP_004787665.1 CDS Murru_1200 NC_015945.1 1305571 1306044 R PFAM: CYTH domain; COGs: COG2954 conserved hypothetical protein; InterPro IPR008172; KEGG: fbc:FB2170_06650 hypothetical protein; PFAM: Adenylate cyclase; SPTR: Adenylate cyclase; adenylate cyclase complement(1305571..1306044) Muricauda ruestringensis DSM 13258 11054021 YP_004787666.1 CDS Murru_1201 NC_015945.1 1306072 1307172 D PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family; COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; HAMAP: DNA polymerase IV; InterPro IPR001126:IPR022880; KEGG: fbc:FB2170_06605 DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like; PRIAM: DNA-directed DNA polymerase; SPTR: DNA polymerase IV; DNA polymerase IV 1306072..1307172 Muricauda ruestringensis DSM 13258 11054022 YP_004787667.1 CDS Murru_1202 NC_015945.1 1307304 1310084 R PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: fbc:FB2170_12151 peptidase, M16 family protein; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; SPTR: Peptidase, M16 family protein; peptidase M16 domain-containing protein complement(1307304..1310084) Muricauda ruestringensis DSM 13258 11054023 YP_004787668.1 CDS Murru_1203 NC_015945.1 1310311 1310889 D PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR001647; KEGG: fjo:Fjoh_2965 TetR family transcriptional regulator; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family protein; regulatory protein TetR 1310311..1310889 Muricauda ruestringensis DSM 13258 11054024 YP_004787669.1 CDS Murru_1204 NC_015945.1 1310955 1312397 R PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; COGs: COG0469 Pyruvate kinase; InterPro IPR015793:IPR015795:IPR001697; KEGG: fbc:FB2170_06580 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, C-terminal-like; PRIAM: Pyruvate kinase; SPTR: Pyruvate kinase; TIGRFAM: Pyruvate kinase; pyruvate kinase complement(1310955..1312397) Muricauda ruestringensis DSM 13258 11054025 YP_004787670.1 CDS Murru_1205 NC_015945.1 1312400 1312870 R KEGG: fbc:FB2170_06575 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1312400..1312870) Muricauda ruestringensis DSM 13258 11054026 YP_004787671.1 CDS Murru_1206 NC_015945.1 1312977 1313714 R PFAM: RNase3 domain; Double-stranded RNA binding motif; TIGRFAM: ribonuclease III, bacterial; COGs: COG0571 dsRNA-specific ribonuclease; HAMAP: Ribonuclease III, bacterial; InterPro IPR000999:IPR001159:IPR011907; KEGG: rbi:RB2501_07545 putative ribonuclease III; PFAM: Ribonuclease III; Double-stranded RNA-binding; PRIAM: Ribonuclease III; SMART: Ribonuclease III; Double-stranded RNA-binding; SPTR: Putative ribonuclease III; TIGRFAM: Ribonuclease III, bacterial; ribonuclease 3 complement(1312977..1313714) Muricauda ruestringensis DSM 13258 11054027 YP_004787672.1 CDS Murru_1207 NC_015945.1 1313724 1314974 R PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR014030:IPR014031:IPR017568:IPR020841; KEGG: rbi:RB2501_07540 putative 3-oxoacyl-[acyl-carrier-protein] synthase II; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase II; SMART: Polyketide synthase, beta-ketoacyl synthase domain; SPTR: Putative 3-oxoacyl-[acyl-carrier-protein] synthase II; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; 3-oxoacyl-ACP synthase complement(1313724..1314974) Muricauda ruestringensis DSM 13258 11054028 YP_004787673.1 CDS Murru_1208 NC_015945.1 1315077 1315310 R PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; COGs: COG0236 Acyl carrier protein; HAMAP: Acyl carrier protein (ACP); InterPro IPR006163:IPR003231; KEGG: rbi:RB2501_07535 acyl carrier protein; PFAM: Phosphopantetheine-binding; SPTR: Acyl carrier protein; TIGRFAM: Acyl carrier protein (ACP); acyl carrier protein complement(1315077..1315310) Muricauda ruestringensis DSM 13258 11054029 YP_004787674.1 CDS Murru_1209 NC_015945.1 1315473 1316036 D PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; InterPro IPR002376; KEGG: fbc:FB2170_06555 phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal; PRIAM: Phosphoribosylglycinamide formyltransferase; SPTR: Phosphoribosylglycinamide formyltransferase; phosphoribosylglycinamide formyltransferase 1315473..1316036 Muricauda ruestringensis DSM 13258 11054030 YP_004787675.1 CDS Murru_1210 NC_015945.1 1316037 1316672 D PFAM: RNase H; Caulimovirus viroplasmin; COGs: COG3341 double-stranded RNA/RNA-DNA hybrid binding protein; KEGG: fbc:FB2170_06550 ribonuclease H-like protein; SPTR: Ribonuclease H-related protein; ribonuclease H-like protein 1316037..1316672 Muricauda ruestringensis DSM 13258 11054031 YP_004787676.1 CDS Murru_1211 NC_015945.1 1316967 1317893 D PFAM: pfkB family carbohydrate kinase; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: fbc:FB2170_06545 carbohydrate kinase, PfkB family protein; PFAM: Carbohydrate/purine kinase; SPTR: Carbohydrate kinase, PfkB family protein; PfkB domain-containing protein 1316967..1317893 Muricauda ruestringensis DSM 13258 11054032 YP_004787677.1 CDS Murru_1212 NC_015945.1 1317938 1319836 D PFAM: Glutamine amidotransferases class-II; COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; InterPro IPR000583; KEGG: fbc:FB2170_06540 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; PRIAM: Amidophosphoribosyltransferase; SPTR: Amidophosphoribosyltransferase; Amidophosphoribosyltransferase 1317938..1319836 Muricauda ruestringensis DSM 13258 11054033 YP_004787678.1 CDS Murru_1213 NC_015945.1 1320494 1321102 R PFAM: Iron/manganese superoxide dismutases, alpha-hairpin domain; Iron/manganese superoxide dismutases, C-terminal domain; COGs: COG0605 Superoxide dismutase; InterPro IPR019831:IPR019832; KEGG: fbc:FB2170_06535 superoxide dismutase, Mn family protein; PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal; PRIAM: Superoxide dismutase; SPTR: Superoxide dismutase; Superoxide dismutase complement(1320494..1321102) Muricauda ruestringensis DSM 13258 11054034 YP_004787679.1 CDS Murru_1214 NC_015945.1 1321221 1324343 D PFAM: UvrD/REP helicase; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212; KEGG: fbc:FB2170_06530 ATP-dependent helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: ATP-dependent helicase; UvrD/REP helicase 1321221..1324343 Muricauda ruestringensis DSM 13258 11054035 YP_004787680.1 CDS Murru_1215 NC_015945.1 1324358 1325551 D PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; 2-amino-3-ketobutyrate coenzyme A ligase; COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839:IPR011282; KEGG: fbc:FB2170_06525 2-amino-3-ketobutyrate coenzyme A ligase; PFAM: Aminotransferase, class I/classII; PRIAM: Glycine C-acetyltransferase; SPTR: 2-amino-3-ketobutyrate coenzyme A ligase; TIGRFAM: 2-amino-3-ketobutyrate coenzyme A ligase; 2-amino-3-ketobutyrate CoA ligase 1324358..1325551 Muricauda ruestringensis DSM 13258 11054036 YP_004787681.1 CDS Murru_1216 NC_015945.1 1325675 1327033 D PFAM: OmpA family; Thrombospondin type 3 repeat; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR003367:IPR006665; KEGG: rbi:RB2501_07490 thrombospondin type 3 repeat:OmpA/MotB; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Thrombospondin, type 3-like repeat; SPTR: Thrombospondin type 3 repeat:OmpA/MotB; OmpA/MotB domain-containing protein 1325675..1327033 Muricauda ruestringensis DSM 13258 11054037 YP_004787682.1 CDS Murru_1217 NC_015945.1 1327096 1329828 D KEGG: fbc:FB2170_06515 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 1327096..1329828 Muricauda ruestringensis DSM 13258 11054038 YP_004787683.1 CDS Murru_1218 NC_015945.1 1329829 1330539 R PFAM: short chain dehydrogenase; COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: fbc:FB2170_06510 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short chain dehydrogenase; 3-oxoacyl-ACP reductase complement(1329829..1330539) Muricauda ruestringensis DSM 13258 11054039 YP_004787684.1 CDS Murru_1219 NC_015945.1 1330675 1331634 D PFAM: WD40-like Beta Propeller Repeat; InterPro IPR011659; KEGG: dfe:Dfer_1770 WD40 domain protein beta propeller; PFAM: WD40-like Beta Propeller; SPTR: Putative uncharacterized protein; WD40-like beta Propeller containing protein 1330675..1331634 Muricauda ruestringensis DSM 13258 11054040 YP_004787685.1 CDS Murru_1220 NC_015945.1 1331577 1331726 R hypothetical protein complement(1331577..1331726) Muricauda ruestringensis DSM 13258 11054041 YP_004787686.1 CDS Murru_1221 NC_015945.1 1331848 1332231 D KEGG: dfe:Dfer_0503 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1331848..1332231 Muricauda ruestringensis DSM 13258 11054042 YP_004787687.1 CDS Murru_1222 NC_015945.1 1332312 1333181 D PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: fbc:FB2170_04365 hypothetical protein; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase; manually curated; pseudouridine synthase 1332312..1333181 Muricauda ruestringensis DSM 13258 11054043 YP_004787688.1 CDS Murru_1223 NC_015945.1 1333350 1334147 R PFAM: Universal stress protein family; InterPro IPR006016; KEGG: fbc:FB2170_06460 hypothetical protein; PFAM: UspA; SPTR: Putative uncharacterized protein; UspA domain-containing protein complement(1333350..1334147) Muricauda ruestringensis DSM 13258 11054045 YP_004787689.1 CDS Murru_1224 NC_015945.1 1334201 1334701 D PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: fbc:FB2170_06455 putative acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Predicted acetyltransferase; N-acetyltransferase GCN5 1334201..1334701 Muricauda ruestringensis DSM 13258 11054046 YP_004787690.1 CDS Murru_1225 NC_015945.1 1334714 1336048 D PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: fbc:FB2170_06450 hypothetical protein; PFAM: Multi antimicrobial extrusion protein; SPTR: Putative uncharacterized protein; TIGRFAM: Multi antimicrobial extrusion protein; MATE efflux family protein 1334714..1336048 Muricauda ruestringensis DSM 13258 11054047 YP_004787691.1 CDS Murru_1226 NC_015945.1 1336091 1336858 D PFAM: Enoyl-CoA hydratase/isomerase family; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: fbc:FB2170_06445 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core; SPTR: Enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 1336091..1336858 Muricauda ruestringensis DSM 13258 11054048 YP_004787692.1 CDS Murru_1227 NC_015945.1 1336863 1337003 D hypothetical protein 1336863..1337003 Muricauda ruestringensis DSM 13258 11054049 YP_004787693.1 CDS Murru_1228 NC_015945.1 1337015 1337107 D hypothetical protein 1337015..1337107 Muricauda ruestringensis DSM 13258 11054050 YP_004787694.1 CDS Murru_1229 NC_015945.1 1337167 1337430 D KEGG: fps:FP1231 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1337167..1337430 Muricauda ruestringensis DSM 13258 11054051 YP_004787695.1 CDS Murru_1230 NC_015945.1 1337427 1337693 D InterPro IPR007712; KEGG: mar:MAE_55750 hypothetical protein; PFAM: Plasmid stabilisation system; SPTR: Putative uncharacterized protein; plasmid stabilization system 1337427..1337693 Muricauda ruestringensis DSM 13258 11054052 YP_004787696.1 CDS Murru_1231 NC_015945.1 1337700 1338467 D COGs: COG2908 conserved hypothetical protein; InterPro IPR004843; KEGG: fbc:FB2170_06395 putative UDP-2,3-diacylglucosamine hydrolase; PFAM: Metallo-dependent phosphatase; SPTR: Putative UDP-2,3-diacylglucosamine hydrolase; metallophosphoesterase 1337700..1338467 Muricauda ruestringensis DSM 13258 11054053 YP_004787697.1 CDS Murru_1232 NC_015945.1 1338464 1339723 R PFAM: Bacterial protein of unknown function (DUF894); InterPro IPR011701; KEGG: rbi:RB2501_13114 putative transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Putative transporter; major facilitator superfamily protein complement(1338464..1339723) Muricauda ruestringensis DSM 13258 11054054 YP_004787698.1 CDS Murru_1233 NC_015945.1 1339730 1341418 R PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR001667:IPR003156:IPR004610; KEGG: fbc:FB2170_06385 single-stranded-DNA-specific exonuclease RecJ; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR: Single-stranded-DNA-specific exonuclease recJ; TIGRFAM: Bacterial RecJ exonuclease; single-stranded-DNA-specific exonuclease RecJ complement(1339730..1341418) Muricauda ruestringensis DSM 13258 11054055 YP_004787699.1 CDS Murru_1234 NC_015945.1 1341486 1341776 R PFAM: GIY-YIG catalytic domain; COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: fjo:Fjoh_0254 excinuclease ABC subunit C; PFAM: Excinuclease ABC, C subunit, N-terminal; SMART: Excinuclease ABC, C subunit, N-terminal; SPTR: Predicted endonuclease containing a URI domain; excinuclease ABC C subunit domain-containing protein complement(1341486..1341776) Muricauda ruestringensis DSM 13258 11054056 YP_004787700.1 CDS Murru_1235 NC_015945.1 1341777 1341917 R hypothetical protein complement(1341777..1341917) Muricauda ruestringensis DSM 13258 11054057 YP_004787701.1 CDS Murru_1236 NC_015945.1 1342036 1342458 R PFAM: OsmC-like protein; COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: fbc:FB2170_06380 hypothetical protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: OsmC family protein; OsmC family protein complement(1342036..1342458) Muricauda ruestringensis DSM 13258 11054058 YP_004787702.1 CDS Murru_1237 NC_015945.1 1342514 1343116 D PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain; InterPro IPR003779; KEGG: cat:CA2559_02815 probable fusion protein; PFAM: Carboxymuconolactone decarboxylase; SPTR: Carboxymuconolactone decarboxylase; carboxymuconolactone decarboxylase 1342514..1343116 Muricauda ruestringensis DSM 13258 11054059 YP_004787703.1 CDS Murru_1238 NC_015945.1 1343272 1343442 D hypothetical protein 1343272..1343442 Muricauda ruestringensis DSM 13258 11054060 YP_004787704.1 CDS Murru_1239 NC_015945.1 1343435 1344007 R PFAM: Uracil DNA glycosylase superfamily; COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005122; KEGG: fbc:FB2170_06375 hypothetical protein; PFAM: Uracil-DNA glycosylase-like; SPTR: Putative uncharacterized protein; uracil-DNA glycosylase complement(1343435..1344007) Muricauda ruestringensis DSM 13258 11054061 YP_004787705.1 CDS Murru_1240 NC_015945.1 1344098 1344571 R KEGG: vsp:VS_II1421 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1344098..1344571) Muricauda ruestringensis DSM 13258 11054062 YP_004787706.1 CDS Murru_1241 NC_015945.1 1344596 1344946 R KEGG: sil:SPO0259 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1344596..1344946) Muricauda ruestringensis DSM 13258 11054063 YP_004787707.1 CDS Murru_1242 NC_015945.1 1344956 1345306 R KEGG: srm:SRM_01474 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1344956..1345306) Muricauda ruestringensis DSM 13258 11054064 YP_004787708.1 CDS Murru_1243 NC_015945.1 1345383 1346450 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: dsa:Desal_2278 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Putative uncharacterized protein; AraC family transcriptional regulator complement(1345383..1346450) Muricauda ruestringensis DSM 13258 11054065 YP_004787709.1 CDS Murru_1244 NC_015945.1 1346614 1347021 D KEGG: mtt:Ftrac_3770 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1346614..1347021 Muricauda ruestringensis DSM 13258 11054066 YP_004787710.1 CDS Murru_1245 NC_015945.1 1347021 1347218 D PFAM: Helix-turn-helix; COGs: COG1476 transcriptional regulator protein; InterPro IPR001387; KEGG: mtt:Ftrac_3771 transcriptional regulator, xre family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, PBSX family protein; XRE family transcriptional regulator 1347021..1347218 Muricauda ruestringensis DSM 13258 11054067 YP_004787711.1 CDS Murru_1246 NC_015945.1 1347215 1347889 R PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; COGs: COG0313 methyltransferase; HAMAP: Ribosomal RNA small subunit methyltransferase I; InterPro IPR000878:IPR008189; KEGG: fps:FP1061 methyltransferase; PFAM: Tetrapyrrole methylase; SPTR: Methyltransferase; TIGRFAM: Uncharacterised protein family UPF0011; ribosomal RNA small subunit methyltransferase I complement(1347215..1347889) Muricauda ruestringensis DSM 13258 11054068 YP_004787712.1 CDS Murru_1247 NC_015945.1 1348089 1348778 R KEGG: fbc:FB2170_06350 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1348089..1348778) Muricauda ruestringensis DSM 13258 11054069 YP_004787713.1 CDS Murru_1248 NC_015945.1 1348934 1349578 D PFAM: Thymidine kinase; COGs: COG1435 Thymidine kinase; InterPro IPR001267; KEGG: fbc:FB2170_06340 putative thymidine kinase; PFAM: Thymidine kinase; PRIAM: Thymidine kinase; SPTR: Thymidine kinase; thymidine kinase 1348934..1349578 Muricauda ruestringensis DSM 13258 11054070 YP_004787714.1 CDS Murru_1249 NC_015945.1 1349571 1350680 D PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase; COGs: COG0787 Alanine racemase; HAMAP: Alanine racemase; InterPro IPR000821:IPR001608:IPR011079; KEGG: fbc:FB2170_06335 alanine racemase; PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal; PRIAM: Alanine racemase; SPTR: Alanine racemase; TIGRFAM: Alanine racemase; alanine racemase 1349571..1350680 Muricauda ruestringensis DSM 13258 11054071 YP_004787715.1 CDS Murru_1250 NC_015945.1 1350733 1351140 D PFAM: Large-conductance mechanosensitive channel, MscL; TIGRFAM: large conductance mechanosensitive channel protein; COGs: COG1970 Large-conductance mechanosensitive channel; HAMAP: Large-conductance mechanosensitive channel; InterPro IPR001185; KEGG: pru:PRU_1675 large conductance mechanosensitive channel protein; PFAM: Large-conductance mechanosensitive channel; SPTR: Large-conductance mechanosensitive channel; TIGRFAM: Large-conductance mechanosensitive channel; Large-conductance mechanosensitive channel 1350733..1351140 Muricauda ruestringensis DSM 13258 11054072 YP_004787716.1 CDS Murru_1251 NC_015945.1 1351334 1352347 D PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms); COGs: COG0136 Aspartate-semialdehyde dehydrogenase; InterPro IPR000534:IPR012280:IPR005986; KEGG: fbc:FB2170_06325 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD-binding; PRIAM: Aspartate-semialdehyde dehydrogenase; SMART: Semialdehyde dehydrogenase, NAD-binding; SPTR: Aspartate-semialdehyde dehydrogenase; TIGRFAM: Aspartate-semialdehyde dehydrogenase, bacterial; aspartate-semialdehyde dehydrogenase 1351334..1352347 Muricauda ruestringensis DSM 13258 11054073 YP_004787717.1 CDS Murru_1252 NC_015945.1 1352382 1353116 R PFAM: Protein of unknown function (Porph_ging); InterPro IPR019115; KEGG: zpr:ZPR_0171 hypothetical protein; PFAM: Uncharacterised protein family, bacteroidetes; SPTR: Putative uncharacterized protein; hypothetical protein complement(1352382..1353116) Muricauda ruestringensis DSM 13258 11054074 YP_004787718.1 CDS Murru_1253 NC_015945.1 1353123 1353314 R hypothetical protein complement(1353123..1353314) Muricauda ruestringensis DSM 13258 11054075 YP_004787719.1 CDS Murru_1254 NC_015945.1 1353532 1355685 D PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family; COGs: COG1505 Serine protease of the peptidase family S9A; InterPro IPR004106:IPR001375; KEGG: fbc:FB2170_06320 prolyl endopeptidase; PFAM: Peptidase S9A, oligopeptidase, N-terminal beta-propeller; Peptidase S9, prolyl oligopeptidase, catalytic domain; PRIAM: Prolyl oligopeptidase; SPTR: Prolyl endopeptidase; prolyl oligopeptidase 1353532..1355685 Muricauda ruestringensis DSM 13258 11054076 YP_004787720.1 CDS Murru_1255 NC_015945.1 1355751 1356746 D PFAM: ABC transporter; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_06315 iron(III) ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Iron(III) ABC transporter ATP-binding protein; Fe(3+)-transporting ATPase 1355751..1356746 Muricauda ruestringensis DSM 13258 11054077 YP_004787721.1 CDS Murru_1256 NC_015945.1 1356724 1357128 D PFAM: RF-1 domain; COGs: COG1186 Protein chain release factor B; InterPro IPR000352; KEGG: fbc:FB2170_06310 class I peptide chain release factor; PFAM: Peptide chain release factor class I/class II; SPTR: Class I peptide chain release factor; manually curated; class I peptide chain release factor 1356724..1357128 Muricauda ruestringensis DSM 13258 11054078 YP_004787722.1 CDS Murru_1257 NC_015945.1 1357300 1357797 D KEGG: pjd:Pjdr2_2700 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1357300..1357797 Muricauda ruestringensis DSM 13258 11054079 YP_004787723.1 CDS Murru_1258 NC_015945.1 1358225 1360840 D PFAM: Zinc carboxypeptidase; InterPro IPR000834; KEGG: sus:Acid_6585 hypothetical protein; PFAM: Peptidase M14, carboxypeptidase A; SPTR: Putative uncharacterized protein; peptidase M14 carboxypeptidase A 1358225..1360840 Muricauda ruestringensis DSM 13258 11054080 YP_004787724.1 CDS Murru_1259 NC_015945.1 1360920 1362032 D KEGG: bfs:BF1081 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1360920..1362032 Muricauda ruestringensis DSM 13258 11054081 YP_004787725.1 CDS Murru_1260 NC_015945.1 1362047 1362802 R PFAM: Sulfite exporter TauE/SafE; InterPro IPR002781; KEGG: rbi:RB2501_07325 hypothetical protein; PFAM: Protein of unknown function DUF81; SPTR: Putative uncharacterized protein; hypothetical protein complement(1362047..1362802) Muricauda ruestringensis DSM 13258 11054082 YP_004787726.1 CDS Murru_1261 NC_015945.1 1362871 1364673 D PFAM: Sodium:solute symporter family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: rbi:RB2501_07330 sodium/glucose cotransporter; PFAM: Sodium/solute symporter; SPTR: Na+/solute symporter; Na+/solute symporter 1362871..1364673 Muricauda ruestringensis DSM 13258 11054083 YP_004787727.1 CDS Murru_1262 NC_015945.1 1364674 1365315 R PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit; COGs: COG0307 Riboflavin synthase alpha chain; InterPro IPR001783; KEGG: fps:FP2383 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; PRIAM: Riboflavin synthase; SPTR: Riboflavin synthase, alpha subunit; TIGRFAM: Lumazine-binding protein; riboflavin synthase subunit alpha complement(1364674..1365315) Muricauda ruestringensis DSM 13258 11054084 YP_004787728.1 CDS Murru_1263 NC_015945.1 1365323 1366375 D PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; COGs: COG1995 Pyridoxal phosphate biosynthesis protein; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; InterPro IPR005255; KEGG: cat:CA2559_02330 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; PRIAM: 4-hydroxythreonine-4-phosphate dehydrogenase; SPTR: 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; 4-hydroxythreonine-4-phosphate dehydrogenase 1365323..1366375 Muricauda ruestringensis DSM 13258 11054085 YP_004787729.1 CDS Murru_1264 NC_015945.1 1366441 1367019 D PFAM: Uncharacterized ACR, COG1399; InterPro IPR003772; KEGG: rbi:RB2501_07350 hypothetical protein; PFAM: Protein of unknown function DUF177; SPTR: Putative uncharacterized protein; hypothetical protein 1366441..1367019 Muricauda ruestringensis DSM 13258 11054086 YP_004787730.1 CDS Murru_1265 NC_015945.1 1367027 1367227 D PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; HAMAP: Ribosomal protein L32p; InterPro IPR002677; KEGG: fbc:FB2170_06265 50S ribosomal protein L32; PFAM: Ribosomal protein L32p; SPTR: 50S ribosomal protein L32; TIGRFAM: Ribosomal protein L32p; 50S ribosomal protein L32 1367027..1367227 Muricauda ruestringensis DSM 13258 11054087 YP_004787731.1 CDS Murru_1266 NC_015945.1 1367403 1368398 D PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); InterPro IPR004655:IPR013751:IPR013747; KEGG: cat:CA2559_02345 3-oxoacyl-(acyl carrier protein) synthase; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase I; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase 3 1; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); 3-oxoacyl-ACP synthase 1367403..1368398 Muricauda ruestringensis DSM 13258 11054088 YP_004787732.1 CDS Murru_1267 NC_015945.1 1368425 1368928 D PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; COGs: COG0511 Biotin carboxyl carrier protein; InterPro IPR000089:IPR001249; KEGG: fbc:FB2170_06275 acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: Biotin/lipoyl attachment; SPTR: Acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1368425..1368928 Muricauda ruestringensis DSM 13258 11054089 YP_004787733.1 CDS Murru_1268 NC_015945.1 1369013 1370371 D PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR005482:IPR005481:IPR005479:IPR004549; KEGG: fbc:FB2170_06280 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; PRIAM: Biotin carboxylase; SMART: Biotin carboxylase, C-terminal; SPTR: Acetyl-CoA carboxylase, biotin carboxylase; TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; acetyl-CoA carboxylase, biotin carboxylase 1369013..1370371 Muricauda ruestringensis DSM 13258 11054090 YP_004787734.1 CDS Murru_1269 NC_015945.1 1370512 1371630 D PFAM: FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: fbc:FB2170_06285 oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Oxidoreductase; FAD dependent oxidoreductase 1370512..1371630 Muricauda ruestringensis DSM 13258 11054091 YP_004787735.1 CDS Murru_1270 NC_015945.1 1371908 1372570 R PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_07874 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; phosphonate-transporting ATPase complement(1371908..1372570) Muricauda ruestringensis DSM 13258 11054092 YP_004787736.1 CDS Murru_1271 NC_015945.1 1372580 1375012 R PFAM: Predicted permease; TIGRFAM: Acidobacterial duplicated orphan permease; InterPro IPR003838; KEGG: fbc:FB2170_07854 ABC transporter permease; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: ABC transporter, permease protein; hypothetical protein complement(1372580..1375012) Muricauda ruestringensis DSM 13258 11054093 YP_004787737.1 CDS Murru_1272 NC_015945.1 1375032 1377431 R PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: fbc:FB2170_07864 putative ABC transporter permease; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative ABC transporter permease; hypothetical protein complement(1375032..1377431) Muricauda ruestringensis DSM 13258 11054094 YP_004787738.1 CDS Murru_1273 NC_015945.1 1377500 1379914 R PFAM: Predicted permease; InterPro IPR003838; KEGG: sli:Slin_2206 protein of unknown function DUF214; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative ABC transporter permease; hypothetical protein complement(1377500..1379914) Muricauda ruestringensis DSM 13258 11054095 YP_004787739.1 CDS Murru_1274 NC_015945.1 1379937 1382354 R PFAM: Predicted permease; TIGRFAM: Acidobacterial duplicated orphan permease; InterPro IPR003838; KEGG: dfe:Dfer_4840 protein of unknown function DUF214; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative uncharacterized protein; hypothetical protein complement(1379937..1382354) Muricauda ruestringensis DSM 13258 11054096 YP_004787740.1 CDS Murru_1275 NC_015945.1 1382377 1384812 R PFAM: Predicted permease; TIGRFAM: Acidobacterial duplicated orphan permease; InterPro IPR003838; KEGG: fbc:FB2170_07859 putative ABC transporter permease; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative ABC transporter permease; hypothetical protein complement(1382377..1384812) Muricauda ruestringensis DSM 13258 11054097 YP_004787741.1 CDS Murru_1276 NC_015945.1 1384852 1385547 R PFAM: ABC transporter; TIGRFAM: putative bacteriocin export ABC transporter, lactococcin 972 group; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_07844 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; phosphonate-transporting ATPase complement(1384852..1385547) Muricauda ruestringensis DSM 13258 11054098 YP_004787742.1 CDS Murru_1277 NC_015945.1 1385616 1386866 R PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fbc:FB2170_07839 RND family efflux transporter MFP subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, MFP component, RND family protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(1385616..1386866) Muricauda ruestringensis DSM 13258 11054099 YP_004787743.1 CDS Murru_1278 NC_015945.1 1386874 1388208 R PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fbc:FB2170_07834 putative outer membrane transport/efflux protein; PFAM: Outer membrane efflux protein; SPTR: Putative outer membrane transport/efflux protein; outer membrane efflux protein complement(1386874..1388208) Muricauda ruestringensis DSM 13258 11054100 YP_004787744.1 CDS Murru_1279 NC_015945.1 1388413 1389777 D PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078:IPR002197; KEGG: fbc:FB2170_07829 two-component system response regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core; SPTR: Two-component system response regulator; two component sigma-54 specific Fis family transcriptional regulator 1388413..1389777 Muricauda ruestringensis DSM 13258 11054101 YP_004787745.1 CDS Murru_1280 NC_015945.1 1389777 1391129 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR000014:IPR003594; KEGG: fbc:FB2170_07824 putative two-component system sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; PAS; SPTR: Putative two-component system sensor histidine kinase; multi-sensor signal transduction histidine kinase 1389777..1391129 Muricauda ruestringensis DSM 13258 11054102 YP_004787746.1 CDS Murru_1281 NC_015945.1 1391137 1391577 D PFAM: Transcription elongation factor, GreA/GreB, C-term; KEGG: fbc:FB2170_06295 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1391137..1391577 Muricauda ruestringensis DSM 13258 11054103 YP_004787747.1 CDS Murru_1282 NC_015945.1 1391738 1392862 D PFAM: Putative esterase; COGs: COG2382 Enterochelin esterase; InterPro IPR000801; KEGG: fbc:FB2170_09501 putative esterase; PFAM: Putative esterase; SPTR: Putative esterase; esterase 1391738..1392862 Muricauda ruestringensis DSM 13258 11054104 YP_004787748.1 CDS Murru_1283 NC_015945.1 1392965 1393849 D InterPro IPR011659; KEGG: sdn:Sden_2087 hypothetical protein; PFAM: WD40-like Beta Propeller; SPTR: Putative uncharacterized protein; WD40-like beta Propeller containing protein 1392965..1393849 Muricauda ruestringensis DSM 13258 11054105 YP_004787749.1 CDS Murru_1284 NC_015945.1 1394078 1394713 R KEGG: rbi:RB2501_10822 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1394078..1394713) Muricauda ruestringensis DSM 13258 11054106 YP_004787750.1 CDS Murru_1285 NC_015945.1 1394846 1395205 R KEGG: gfo:GFO_1058 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1394846..1395205) Muricauda ruestringensis DSM 13258 11054107 YP_004787751.1 CDS Murru_1286 NC_015945.1 1395248 1395664 R PFAM: Transcription elongation factor, GreA/GreB, C-term; COGs: COG0782 Transcription elongation factor; InterPro IPR001437; KEGG: cat:CA2559_13443 GreA/GreB family elongation factor; PFAM: Transcription elongation factor, GreA/GreB, C-terminal; SPTR: Putative uncharacterized protein; GreA/GreB family elongation factor complement(1395248..1395664) Muricauda ruestringensis DSM 13258 11054108 YP_004787752.1 CDS Murru_1287 NC_015945.1 1395868 1397193 R PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078:IPR002197; KEGG: cat:CA2559_13448 two component, sigma54 specific, transcriptional regulator, fis family protein; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family protein; two component sigma-54 specific Fis family transcriptional regulator complement(1395868..1397193) Muricauda ruestringensis DSM 13258 11054109 YP_004787753.1 CDS Murru_1288 NC_015945.1 1397199 1398290 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003661:IPR003594; KEGG: rbi:RB2501_10837 sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Sensor histidine kinase; histidine kinase complement(1397199..1398290) Muricauda ruestringensis DSM 13258 11054110 YP_004787754.1 CDS Murru_1289 NC_015945.1 1398467 1399678 R PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Putative esterase; COGs: COG2382 Enterochelin esterase; InterPro IPR000801; KEGG: rbi:RB2501_09110 putative glycosyl hydrolase exoenzyme; PFAM: Putative esterase; SPTR: Putative glycosyl hydrolase exoenzyme; esterase complement(1398467..1399678) Muricauda ruestringensis DSM 13258 11054111 YP_004787755.1 CDS Murru_1290 NC_015945.1 1400096 1400503 R PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase; InterPro IPR004360:IPR017515; KEGG: fps:FP0237 lyase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Methylmalonyl-CoA epimerase; TIGRFAM: Methylmalonyl-CoA epimerase; methylmalonyl-CoA epimerase complement(1400096..1400503) Muricauda ruestringensis DSM 13258 11054113 YP_004787756.1 CDS Murru_1291 NC_015945.1 1400606 1401001 D PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; COGs: COG0858 Ribosome-binding factor A; HAMAP: Ribosome-binding factor A; InterPro IPR000238; KEGG: fbc:FB2170_06195 putative ribosome-binding factor A; PFAM: Ribosome-binding factor A; SPTR: Ribosome-binding factor A; TIGRFAM: Ribosome-binding factor A; ribosome-binding factor A 1400606..1401001 Muricauda ruestringensis DSM 13258 11054114 YP_004787757.1 CDS Murru_1292 NC_015945.1 1401004 1402209 D PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: fbc:FB2170_06190 hypothetical protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative uncharacterized protein; hypothetical protein 1401004..1402209 Muricauda ruestringensis DSM 13258 11054115 YP_004787758.1 CDS Murru_1293 NC_015945.1 1402206 1403198 R PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family; COGs: COG0042 tRNA-dihydrouridine synthase; InterPro IPR001269:IPR004652; KEGG: rbi:RB2501_07020 putative TIM-barrel enzyme, putative dehydrogenase, contains a highly conserved dihydrouridine synthase domain; PFAM: tRNA-dihydrouridine synthase; SPTR: tRNA-dihydrouridine synthase; TIGRFAM: tRNA-dihydrouridine synthase, TIM-barrel, NifR3; nifR3 family TIM-barrel protein complement(1402206..1403198) Muricauda ruestringensis DSM 13258 11054116 YP_004787759.1 CDS Murru_1294 NC_015945.1 1403251 1405671 R InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_04060 hypothetical protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Putative uncharacterized protein; TonB-dependent receptor complement(1403251..1405671) Muricauda ruestringensis DSM 13258 11054117 YP_004787760.1 CDS Murru_1295 NC_015945.1 1405754 1407619 D PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain; COGs: COG0481 Membrane GTPase LepA; HAMAP: GTP-binding protein LepA; InterProIPR006297:IPR000795:IPR004161:IPR000640:IPR 013842:IPR005225; KEGG: rbi:RB2501_06995 GTP-binding protein LepA; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SPTR: Elongation factor 4; TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; GTP-binding protein lepA 1405754..1407619 Muricauda ruestringensis DSM 13258 11054118 YP_004787761.1 CDS Murru_1296 NC_015945.1 1407870 1408310 R SPTR: Putative uncharacterized protein; hypothetical protein complement(1407870..1408310) Muricauda ruestringensis DSM 13258 11054119 YP_004787762.1 CDS Murru_1297 NC_015945.1 1408501 1410270 R PFAM: TrkA-C domain; Citrate transporter; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR004680:IPR006037; KEGG: zpr:ZPR_3645 transport protein; PFAM: Divalent ion symporter; Regulator of K+ conductance, C-terminal; SPTR: Transport protein; citrate transporter complement(1408501..1410270) Muricauda ruestringensis DSM 13258 11054120 YP_004787763.1 CDS Murru_1298 NC_015945.1 1410393 1412246 R PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; COGs: COG0025 NhaP-type Na+/H+ and K+/H+ antiporter; InterPro IPR006153:IPR003148; KEGG: rbi:RB2501_06990 Na(+):H(+) antiporter, CPA1 family protein; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; SPTR: Na(+):H(+) antiporter, CPA1 family protein; sodium/hydrogen exchanger complement(1410393..1412246) Muricauda ruestringensis DSM 13258 11054121 YP_004787764.1 CDS Murru_1299 NC_015945.1 1412456 1413322 D PFAM: Metallo-beta-lactamase superfamily; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279; KEGG: fbc:FB2170_06125 metallo-beta-lactamase superfamily protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: Metallo-beta-lactamase superfamily protein; beta-lactamase domain-containing protein 1412456..1413322 Muricauda ruestringensis DSM 13258 11054122 YP_004787765.1 CDS Murru_1300 NC_015945.1 1413349 1414998 D PFAM: Subtilase family; COGs: COG1404 Subtilisin-like serine protease; InterPro IPR000209; KEGG: fbc:FB2170_06120 serine protease / subtilase peptidase; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; PRIAM: Subtilisin; SPTR: Serine protease / subtilase peptidase; subtilisin 1413349..1414998 Muricauda ruestringensis DSM 13258 11054123 YP_004787766.1 CDS Murru_1301 NC_015945.1 1415002 1416855 D PFAM: Peptidase family M1; COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: fbc:FB2170_06115 Zn-dependent aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; SPTR: Zn-dependent aminopeptidase, putative; peptidase M1 membrane alanine aminopeptidase 1415002..1416855 Muricauda ruestringensis DSM 13258 11054124 YP_004787767.1 CDS Murru_1303 NC_015945.1 1417359 1418345 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: zpr:ZPR_4669 transposase IS116/IS110/IS902 family; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; SPTR: Transposase; transposase IS116/IS110/IS902 family protein complement(1417359..1418345) Muricauda ruestringensis DSM 13258 11054126 YP_004787768.1 CDS Murru_1304 NC_015945.1 1418687 1419181 D PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; HAMAP: Ribonuclease P; InterPro IPR000100; KEGG: fbc:FB2170_06100 ribonuclease P; PFAM: Ribonuclease P; SPTR: Ribonuclease P protein component; TIGRFAM: Ribonuclease P; ribonuclease P protein component 1418687..1419181 Muricauda ruestringensis DSM 13258 11054127 YP_004787769.1 CDS Murru_1305 NC_015945.1 1419165 1420790 D PFAM: Peptidase family S41; TIGRFAM: C-terminal peptidase (prc); COGs: COG0793 Periplasmic protease; InterPro IPR001478:IPR005151:IPR004447; KEGG: fbc:FB2170_06095 carboxy-terminal processing protease; PFAM: Peptidase S41; SMART: Peptidase S41; PDZ/DHR/GLGF; SPTR: Carboxy-terminal processing protease; TIGRFAM: Peptidase S41A, C-terminal peptidase; carboxyl-terminal protease 1419165..1420790 Muricauda ruestringensis DSM 13258 11054128 YP_004787770.1 CDS Murru_1306 NC_015945.1 1420941 1421891 D PFAM: Predicted membrane protein (DUF2157); COGs: COG4984 membrane protein; InterPro IPR018677; KEGG: bth:BT_1823 hypothetical protein; PFAM: Protein of unknown function DUF2157, membrane; SPTR: Putative uncharacterized protein; hypothetical protein 1420941..1421891 Muricauda ruestringensis DSM 13258 11054129 YP_004787771.1 CDS Murru_1307 NC_015945.1 1421879 1422958 D KEGG: bth:BT_1824 putative permease; SPTR: Permease; hypothetical protein 1421879..1422958 Muricauda ruestringensis DSM 13258 11054130 YP_004787772.1 CDS Murru_1308 NC_015945.1 1422945 1423433 D COGs: COG4929 Uncharacterized membrane-anchored protein; KEGG: bth:BT_1825 hypothetical protein; SPTR: Membrane protein; hypothetical protein 1422945..1423433 Muricauda ruestringensis DSM 13258 11054131 YP_004787773.1 CDS Murru_1309 NC_015945.1 1423449 1424696 D PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm); COGs: COG0270 Site-specific DNA methylase; InterPro IPR001525; KEGG: fbc:FB2170_06040 DNA (cytosine-5-)-methyltransferase; PFAM: C-5 cytosine methyltransferase; SPTR: Cytosine-specific methyltransferase; TIGRFAM: C-5 cytosine methyltransferase; DNA-cytosine methyltransferase 1423449..1424696 Muricauda ruestringensis DSM 13258 11054132 YP_004787774.1 CDS Murru_1310 NC_015945.1 1424674 1425282 D KEGG: fbc:FB2170_06035 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 1424674..1425282 Muricauda ruestringensis DSM 13258 11054133 YP_004787775.1 CDS Murru_1311 NC_015945.1 1425394 1426185 D SPTR: Putative uncharacterized protein; hypothetical protein 1425394..1426185 Muricauda ruestringensis DSM 13258 11054134 YP_004787776.1 CDS Murru_1312 NC_015945.1 1426385 1426825 R PFAM: Acetyltransferase (GNAT) family; COGs: COG2153 acyltransferase; InterPro IPR000182; KEGG: fbc:FB2170_05985 putative acetyltransferase YybD; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Probable acetyltransferase YybD; N-acetyltransferase GCN5 complement(1426385..1426825) Muricauda ruestringensis DSM 13258 11054135 YP_004787777.1 CDS Murru_1313 NC_015945.1 1426825 1427748 R PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; COGs: COG1230 Co/Zn/Cd efflux system component; InterPro IPR002524; KEGG: fbc:FB2170_05980 cobalt/zinc/cadmium cation efflux pump protein; PFAM: Cation efflux protein; SPTR: Cobalt/zinc/cadmium cation efflux pump protein; TIGRFAM: Cation efflux protein; cation diffusion facilitator family transporter complement(1426825..1427748) Muricauda ruestringensis DSM 13258 11054136 YP_004787778.1 CDS Murru_1314 NC_015945.1 1427754 1428185 R PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family; COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500:IPR004785; KEGG: fbc:FB2170_05975 ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; PRIAM: Ribose-5-phosphate isomerase; SPTR: Ribose 5-phosphate isomerase B, putative; TIGRFAM: Ribose/galactose isomerase; Ribose 5-phosphate isomerase B; RpiB/LacA/LacB family sugar-phosphate isomerase complement(1427754..1428185) Muricauda ruestringensis DSM 13258 11054137 YP_004787779.1 CDS Murru_1315 NC_015945.1 1428779 1430962 D PFAM: Ribonuclease B OB domain; RNB domain; S1 RNA binding domain; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonucleases; COGs: COG0557 Exoribonuclease R; InterProIPR011129:IPR001900:IPR022967:IPR013223:IPR 003029:IPR011805:IPR004476; KEGG: fbc:FB2170_05970 putative exoribonuclease; PFAM: Ribonuclease II/R; Ribonuclease B, N-terminal OB domain; Ribosomal protein S1, RNA-binding domain; SMART: Ribonuclease II/R; Cold shock protein; RNA-binding domain, S1; SPTR: Putative exoribonuclease; TIGRFAM: Ribonuclease R, bacterial; Ribonuclease II/ribonuclease R, bacteria; ribonuclease R 1428779..1430962 Muricauda ruestringensis DSM 13258 11054138 YP_004787780.1 CDS Murru_1316 NC_015945.1 1431015 1431695 D PFAM: Protein of unknown function (DUF2807); KEGG: fbc:FB2170_05965 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1431015..1431695 Muricauda ruestringensis DSM 13258 11054139 YP_004787781.1 CDS Murru_1317 NC_015945.1 1431699 1432361 D PFAM: LysE type translocator; InterPro IPR001123; KEGG: fbc:FB2170_05960 hypothetical protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Putative uncharacterized protein; lysine exporter protein LysE/YggA 1431699..1432361 Muricauda ruestringensis DSM 13258 11054140 YP_004787782.1 CDS Murru_1318 NC_015945.1 1432619 1432975 R PFAM: Dihydroneopterin aldolase; TIGRFAM: dihydroneopterin aldolase; FolB domain; COGs: COG1539 Dihydroneopterin aldolase; InterPro IPR006157:IPR006156; KEGG: rbi:RB2501_06880 dihydroneopterin aldolase; PFAM: Dihydroneopterin aldolase; SMART: Dihydroneopterin aldolase; SPTR: Dihydroneopterin aldolase; TIGRFAM: Dihydroneopterin aldolase subgroup; Dihydroneopterin aldolase; manually curated; dihydroneopterin aldolase complement(1432619..1432975) Muricauda ruestringensis DSM 13258 11054142 YP_004787783.1 CDS Murru_1319 NC_015945.1 1433021 1433980 R PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: rbi:RB2501_06875 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein complement(1433021..1433980) Muricauda ruestringensis DSM 13258 11054143 YP_004787784.1 CDS Murru_1320 NC_015945.1 1434003 1447619 R InterPro IPR008454:IPR001434; KEGG: rbi:RB2501_06870 hypothetical protein; PFAM: Collagen-binding surface protein Cna-like, B-type domain; SPTR: Putative uncharacterized protein; TIGRFAM: Domain of unknown function DUF11; hypothetical protein complement(1434003..1447619) Muricauda ruestringensis DSM 13258 11054144 YP_004787785.1 CDS Murru_1321 NC_015945.1 1447633 1449702 R PFAM: Protein of unknown function (DUF3308); Sporulation related domain; TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR007730:IPR019861; KEGG: rbi:RB2501_06865 hypothetical protein; PFAM: Sporulation-related domain; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein complement(1447633..1449702) Muricauda ruestringensis DSM 13258 11054145 YP_004787786.1 CDS Murru_1322 NC_015945.1 1449709 1451967 R KEGG: rbi:RB2501_06860 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1449709..1451967) Muricauda ruestringensis DSM 13258 11054146 YP_004787787.1 CDS Murru_1323 NC_015945.1 1452232 1453917 D PFAM: tRNA synthetases class I (E and Q), catalytic domain; tRNA synthetases class I (E and Q), anti-codon binding domain; TIGRFAM: glutaminyl-tRNA synthetase; COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; HAMAP: Glutaminyl-tRNA synthetase, bacterial; InterPro IPR022861:IPR020058:IPR020059:IPR004514; KEGG: fbc:FB2170_05925 glutaminyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; Glutamyl/glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain; PRIAM: Glutamine--tRNA ligase; SPTR: Glutaminyl-tRNA synthetase; TIGRFAM: Glutaminyl-tRNA synthetase, class Ic; glutaminyl-tRNA synthetase 1452232..1453917 Muricauda ruestringensis DSM 13258 11054147 YP_004787788.1 CDS Murru_1324 NC_015945.1 1454234 1454563 D KEGG: fbc:FB2170_00375 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1454234..1454563 Muricauda ruestringensis DSM 13258 11054148 YP_004787789.1 CDS Murru_1325 NC_015945.1 1454567 1454917 D PFAM: Protein of unknown function (DUF1469); KEGG: fbc:FB2170_00370 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1454567..1454917 Muricauda ruestringensis DSM 13258 11054149 YP_004787790.1 CDS Murru_1326 NC_015945.1 1454914 1455129 D KEGG: rbi:RB2501_06840 glutaminyl-tRNA synthetase; SPTR: Glutaminyl-tRNA synthetase; glutaminyl-tRNA synthetase 1454914..1455129 Muricauda ruestringensis DSM 13258 11054150 YP_004787791.1 CDS Murru_1327 NC_015945.1 1455225 1455362 D hypothetical protein 1455225..1455362 Muricauda ruestringensis DSM 13258 11054151 YP_004787792.1 CDS Murru_1328 NC_015945.1 1455424 1456359 R PFAM: SPFH domain / Band 7 family; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107; KEGG: rbi:RB2501_06835 membrane protease protein family protein; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: Membrane protease protein family protein; hypothetical protein complement(1455424..1456359) Muricauda ruestringensis DSM 13258 11054152 YP_004787793.1 CDS Murru_1329 NC_015945.1 1456453 1457949 R PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family; COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR020058:IPR004527; KEGG: fbc:FB2170_05915 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; PRIAM: Glutamate--tRNA ligase; SPTR: Glutamyl-tRNA synthetase; TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; glutamyl-tRNA synthetase complement(1456453..1457949) Muricauda ruestringensis DSM 13258 11054153 YP_004787794.1 CDS Murru_1330 NC_015945.1 1458115 1461534 D KEGG: fbc:FB2170_05905 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1458115..1461534 Muricauda ruestringensis DSM 13258 11054154 YP_004787795.1 CDS Murru_1331 NC_015945.1 1461527 1461946 D PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family; COGs: COG0319 metal-dependent hydrolase; HAMAP: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; InterPro IPR002036; KEGG: fbc:FB2170_05900 hypothetical protein; PFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; SPTR: Putative metalloprotease FB2170_05900; TIGRFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; metalloprotease ybeY 1461527..1461946 Muricauda ruestringensis DSM 13258 11054155 YP_004787796.1 CDS Murru_1332 NC_015945.1 1461949 1463817 D PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A; COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; HAMAP: Glucose-inhibited division protein A; InterPro IPR004416:IPR002218; KEGG: fbc:FB2170_05895 glucose-inhibited division protein A; PFAM: Glucose-inhibited division protein A-related; SPTR: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TIGRFAM: Glucose-inhibited division protein A; tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG 1461949..1463817 Muricauda ruestringensis DSM 13258 11054156 YP_004787797.1 CDS Murru_1333 NC_015945.1 1464184 1465014 D PFAM: Methyltransferase domain; InterPro IPR013217; KEGG: fbc:FB2170_05890 hypothetical protein; PFAM: Methyltransferase type 12; SPTR: Methyltransferase type 11; type 12 methyltransferase 1464184..1465014 Muricauda ruestringensis DSM 13258 11054157 YP_004787798.1 CDS Murru_1334 NC_015945.1 1465256 1465762 D PFAM: Outer membrane protein (OmpH-like); InterPro IPR005632; KEGG: fbc:FB2170_05885 hypothetical protein; PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH); SPTR: Putative uncharacterized protein; outer membrane chaperone Skp 1465256..1465762 Muricauda ruestringensis DSM 13258 11054158 YP_004787799.1 CDS Murru_1335 NC_015945.1 1465818 1466267 R COGs: COG4270 membrane protein; KEGG: zpr:ZPR_0737 membrane protein; SPTR: Membrane protein; membrane protein complement(1465818..1466267) Muricauda ruestringensis DSM 13258 11054159 YP_004787800.1 CDS Murru_1336 NC_015945.1 1466318 1466884 R PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: zpr:ZPR_0736 protein containing cyclic nucleotide-binding domain; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain; SPTR: Protein containing cyclic nucleotide-binding domain; putative Crp/Fnr family transcriptional regulator complement(1466318..1466884) Muricauda ruestringensis DSM 13258 11054160 YP_004787801.1 CDS Murru_1337 NC_015945.1 1466901 1467080 R hypothetical protein complement(1466901..1467080) Muricauda ruestringensis DSM 13258 11054161 YP_004787802.1 CDS Murru_1338 NC_015945.1 1467169 1467564 R KEGG: fbc:FB2170_05880 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1467169..1467564) Muricauda ruestringensis DSM 13258 11054162 YP_004787803.1 CDS Murru_1339 NC_015945.1 1467654 1467881 D hypothetical protein 1467654..1467881 Muricauda ruestringensis DSM 13258 11054163 YP_004787804.1 CDS Murru_1340 NC_015945.1 1467794 1468945 R TIGRFAM: DNA polymerase III, delta' subunit; COGs: COG2812 DNA polymerase III gamma/tau subunits; KEGG: rbi:RB2501_06795 putative DNA polymerase III subunit delta; SPTR: Putative DNA polymerase III, delta subunit; putative DNA polymerase III subunit delta complement(1467794..1468945) Muricauda ruestringensis DSM 13258 11054164 YP_004787805.1 CDS Murru_1341 NC_015945.1 1469326 1470066 D KEGG: rbi:RB2501_07210 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1469326..1470066 Muricauda ruestringensis DSM 13258 11054165 YP_004787806.1 CDS Murru_1342 NC_015945.1 1470127 1471080 R KEGG: rbi:RB2501_04620 putative lipoprotein; SPTR: Putative lipoprotein; putative lipoprotein complement(1470127..1471080) Muricauda ruestringensis DSM 13258 11054166 YP_004787807.1 CDS Murru_1343 NC_015945.1 1471146 1471253 R hypothetical protein complement(1471146..1471253) Muricauda ruestringensis DSM 13258 11054167 YP_004787808.1 CDS Murru_1344 NC_015945.1 1471505 1472695 D PFAM: Phosphoglycerate kinase; COGs: COG0126 3-phosphoglycerate kinase; HAMAP: Phosphoglycerate kinase; InterPro IPR001576; KEGG: fbc:FB2170_05870 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: Phosphoglycerate kinase; phosphoglycerate kinase 1471505..1472695 Muricauda ruestringensis DSM 13258 11054168 YP_004787809.1 CDS Murru_1345 NC_015945.1 1472813 1474414 D PFAM: Transglycosylase SLT domain; LysM domain; COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR002482:IPR008258:IPR018392; KEGG: fbc:FB2170_05865 membrane-bound lytic murein transglycosylase; PFAM: Lytic transglycosylase-like, catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Membrane-bound lytic murein transglycosylase, putative; lytic transglycosylase 1472813..1474414 Muricauda ruestringensis DSM 13258 11054169 YP_004787810.1 CDS Murru_1346 NC_015945.1 1474427 1475425 D KEGG: fbc:FB2170_05860 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1474427..1475425 Muricauda ruestringensis DSM 13258 11054170 YP_004787811.1 CDS Murru_1347 NC_015945.1 1475609 1475779 R KEGG: fbc:FB2170_04085 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1475609..1475779) Muricauda ruestringensis DSM 13258 11054171 YP_004787812.1 CDS Murru_1348 NC_015945.1 1476028 1478034 R PFAM: WD40-like Beta Propeller Repeat; Cna protein B-type domain; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR008454:IPR006665; KEGG: fbc:FB2170_05845 OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; Collagen-binding surface protein Cna-like, B-type domain; SPTR: OmpA family protein; OmpA/MotB domain-containing protein complement(1476028..1478034) Muricauda ruestringensis DSM 13258 11054172 YP_004787813.1 CDS Murru_1349 NC_015945.1 1478297 1478494 R PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; HAMAP: Twin-arginine translocation protein TatA/E; InterPro IPR006312:IPR003369; KEGG: ran:Riean_1452 twin-arginine translocation protein, TatA/e family subunit; PFAM: Bacterial sec-independent translocation protein MttA/Hcf106; SPTR: Sec-independent protein translocase protein tatA/E homolog; TIGRFAM: Twin-arginine translocation protein TatA/E; Sec-independent protein translocase protein tatA/E-like protein complement(1478297..1478494) Muricauda ruestringensis DSM 13258 11054173 YP_004787814.1 CDS Murru_1350 NC_015945.1 1478662 1479531 D PFAM: Peptidase family M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: rbi:RB2501_06755 putative peptidase; PFAM: Peptidase M23; SPTR: Putative peptidase; peptidase M23 1478662..1479531 Muricauda ruestringensis DSM 13258 11054174 YP_004787815.1 CDS Murru_1351 NC_015945.1 1479532 1481031 D PFAM: GH3 auxin-responsive promoter; InterPro IPR004993; KEGG: fbc:FB2170_05830 putative auxin-regulated protein; PFAM: GH3 auxin-responsive promoter; SPTR: Putative auxin-regulated protein; manually curated; GH3 auxin-responsive promoter 1479532..1481031 Muricauda ruestringensis DSM 13258 11054175 YP_004787816.1 CDS Murru_1352 NC_015945.1 1481081 1482769 D KEGG: rbi:RB2501_06745 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1481081..1482769 Muricauda ruestringensis DSM 13258 11054176 YP_004787817.1 CDS Murru_1353 NC_015945.1 1482773 1483822 D KEGG: cat:CA2559_02905 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1482773..1483822 Muricauda ruestringensis DSM 13258 11054177 YP_004787818.1 CDS Murru_1354 NC_015945.1 1483890 1484666 D PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase; COGs: COG1091 dTDP-4-dehydrorhamnose reductase; InterPro IPR005913; KEGG: fbc:FB2170_05800 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; PRIAM: dTDP-4-dehydrorhamnose reductase; SPTR: dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; dTDP-4-dehydrorhamnose reductase 1483890..1484666 Muricauda ruestringensis DSM 13258 11054178 YP_004787819.1 CDS Murru_1355 NC_015945.1 1484726 1485787 D PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR001509:IPR005888; KEGG: fps:FP1294 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: dTDP-glucose 4,6-dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; dTDP-glucose 4,6-dehydratase 1484726..1485787 Muricauda ruestringensis DSM 13258 11054179 YP_004787820.1 CDS Murru_1356 NC_015945.1 1485794 1486663 D PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form; COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005835:IPR005907; KEGG: zpr:ZPR_2100 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; PRIAM: Glucose-1-phosphate thymidylyltransferase; SPTR: Glucose-1-phosphate thymidylyltransferase; TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; glucose-1-phosphate thymidylyltransferase 1485794..1486663 Muricauda ruestringensis DSM 13258 11054180 YP_004787821.1 CDS Murru_1357 NC_015945.1 1486660 1487208 D PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; COGs: COG1898 dTDP-4-dehydrorhamnose 3 5-epimerase; InterPro IPR000888; KEGG: fps:FP2479 dTDP-4-dehydrorhamnose 3,5-epimerase; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase-related; PRIAM: dTDP-4-dehydrorhamnose 3,5-epimerase; SPTR: DTDP-4-dehydrorhamnose 3,5-epimerase; TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase-related; dTDP-4-dehydrorhamnose 3,5-epimerase 1486660..1487208 Muricauda ruestringensis DSM 13258 11054181 YP_004787822.1 CDS Murru_1358 NC_015945.1 1487220 1488032 D PFAM: Potyvirus P1 protease; Inositol monophosphatase family; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, bacterial; COGs: COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; InterPro IPR000760:IPR006240; KEGG: fbc:FB2170_04590 CysQ, sulfite synthesis pathway protein; PFAM: Inositol monophosphatase; SPTR: CysQ, sulfite synthesis pathway protein; TIGRFAM: 3(2),5 -bisphosphate nucleotidase, bacterial; 3'(2'),5'-bisphosphate nucleotidase 1487220..1488032 Muricauda ruestringensis DSM 13258 11054182 YP_004787823.1 CDS Murru_1359 NC_015945.1 1488033 1488467 D PFAM: Predicted membrane protein (DUF2061); InterPro IPR018638; KEGG: rbi:RB2501_13309 hypothetical protein; PFAM: Protein of unknown function DUF2061, membrane; SPTR: Putative uncharacterized protein; hypothetical protein 1488033..1488467 Muricauda ruestringensis DSM 13258 11054183 YP_004787824.1 CDS Murru_1360 NC_015945.1 1488449 1489039 D PFAM: Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK); COGs: COG0529 Adenylylsulfate kinase and related kinase; HAMAP: Adenylylsulphate kinase, C-terminal; InterPro IPR002891; KEGG: fbc:FB2170_04595 adenylylsulfate kinase; PFAM: Adenylylsulphate kinase, C-terminal; PRIAM: Adenylyl-sulfate kinase; SPTR: Adenylyl-sulfate kinase; TIGRFAM: Adenylylsulphate kinase, C-terminal; adenylylsulfate kinase 1488449..1489039 Muricauda ruestringensis DSM 13258 11054184 YP_004787825.1 CDS Murru_1361 NC_015945.1 1489039 1489944 D PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit; COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR002500:IPR011784; KEGG: rbi:RB2501_13299 sulfate adenylyltransferase subunit 2; PFAM: Phosphoadenosine phosphosulphate reductase; PRIAM: Sulfate adenylyltransferase; SPTR: Sulfate adenylyltransferase subunit 2; TIGRFAM: Sulphate adenylyltransferase, small subunit; sulfate adenylyltransferase 1489039..1489944 Muricauda ruestringensis DSM 13258 11054185 YP_004787826.1 CDS Murru_1362 NC_015945.1 1489952 1491205 D PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain; COGs: COG2895 GTPase - Sulfate adenylate transferase subunit 1; InterPro IPR000795:IPR004161:IPR011779; KEGG: fbc:FB2170_04605 sulfate adenylyltransferase large subunit; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; PRIAM: Sulfate adenylyltransferase; SPTR: Sulfate adenylyltransferase, large subunit; TIGRFAM: Sulphate adenylyltransferase, large subunit; sulfate adenylyltransferase 1489952..1491205 Muricauda ruestringensis DSM 13258 11054186 YP_004787827.1 CDS Murru_1364 NC_015945.1 1492695 1494149 D KEGG: cbi:CLJ_B3312 hypothetical protein; SPTR: ABC transporter ATP-binding protein; hypothetical protein 1492695..1494149 Muricauda ruestringensis DSM 13258 11054188 YP_004787828.1 CDS Murru_1365 NC_015945.1 1494343 1495590 D PFAM: Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: pdi:BDI_1414 putative O-antigen transporter; PFAM: Polysaccharide biosynthesis protein; SPTR: RfbX protein; manually curated; polysaccharide biosynthesis protein 1494343..1495590 Muricauda ruestringensis DSM 13258 11054189 YP_004787829.1 CDS Murru_1366 NC_015945.1 1495590 1496024 D COGs: COG1045 Serine acetyltransferase; InterPro IPR001451; KEGG: cpo:COPRO5265_0054 serine acetyltransferase (SAT); PFAM: Bacterial transferase hexapeptide repeat; SPTR: Serine acetyltransferase; transferase 1495590..1496024 Muricauda ruestringensis DSM 13258 11054190 YP_004787830.1 CDS Murru_1367 NC_015945.1 1496021 1496941 D PFAM: Sulfotransferase domain; InterPro IPR000863; KEGG: mif:Metin_0222 sulfotransferase; PFAM: Sulfotransferase domain; SPTR: Sulfotransferase; sulfotransferase 1496021..1496941 Muricauda ruestringensis DSM 13258 11054191 YP_004787831.1 CDS Murru_1368 NC_015945.1 1496957 1498321 D PFAM: O-Antigen ligase; InterPro IPR007016; KEGG: cno:NT01CX_1531 hypothetical protein; PFAM: O-antigen ligase-related; SPTR: Putative uncharacterized protein; O-antigen polymerase 1496957..1498321 Muricauda ruestringensis DSM 13258 11054192 YP_004787832.1 CDS Murru_1369 NC_015945.1 1498305 1499135 D PFAM: Glycosyl transferase family 2; InterPro IPR001173; KEGG: ckn:Calkro_0047 glycosyl transferase family 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2; family 2 glycosyl transferase 1498305..1499135 Muricauda ruestringensis DSM 13258 11054193 YP_004787833.1 CDS Murru_1370 NC_015945.1 1499128 1500360 D PFAM: O-Antigen ligase; KEGG: fjo:Fjoh_1031 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1499128..1500360 Muricauda ruestringensis DSM 13258 11054194 YP_004787834.1 CDS Murru_1371 NC_015945.1 1500342 1501418 R PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: cno:NT01CX_1528 glycosyl transferase, group 1 family protein, putative; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1; group 1 glycosyl transferase complement(1500342..1501418) Muricauda ruestringensis DSM 13258 11054195 YP_004787835.1 CDS Murru_1372 NC_015945.1 1501540 1502892 D PFAM: Bacterial sugar transferase; TIGRFAM: Undecaprenyl-phosphate glucose phosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362:IPR017475; KEGG: fbc:FB2170_05740 glycosyltransferase; PFAM: Bacterial sugar transferase; PRIAM: Undecaprenyl-phosphate galactose phosphotransferase; SPTR: Glycosyltransferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 1501540..1502892 Muricauda ruestringensis DSM 13258 11054196 YP_004787836.1 CDS Murru_1373 NC_015945.1 1502991 1503977 D PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: fbc:FB2170_05735 UDP-glucuronate decarboxylase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: UDP-glucuronate decarboxylase; SPTR: UDP-glucuronate decarboxylase; UDP-glucuronate decarboxylase 1502991..1503977 Muricauda ruestringensis DSM 13258 11054197 YP_004787837.1 CDS Murru_1374 NC_015945.1 1504186 1505457 D PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; COGs: COG0151 Phosphoribosylamine-glycine ligase; HAMAP: Phosphoribosylglycinamide synthetase; InterPro IPR000115:IPR020562:IPR020561:IPR020560; KEGG: fbc:FB2170_05730 putative phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; PRIAM: Phosphoribosylamine--glycine ligase; SPTR: Phosphoglycerate kinase; TIGRFAM: Phosphoribosylglycinamide synthetase; phosphoribosylamine--glycine ligase 1504186..1505457 Muricauda ruestringensis DSM 13258 11054198 YP_004787838.1 CDS Murru_1375 NC_015945.1 1505452 1505673 R KEGG: rbi:RB2501_06645 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1505452..1505673) Muricauda ruestringensis DSM 13258 11054199 YP_004787839.1 CDS Murru_1376 NC_015945.1 1505713 1506642 D KEGG: fbc:FB2170_05720 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1505713..1506642 Muricauda ruestringensis DSM 13258 11054200 YP_004787840.1 CDS Murru_1377 NC_015945.1 1506685 1507290 D KEGG: fbc:FB2170_05715 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1506685..1507290 Muricauda ruestringensis DSM 13258 11054201 YP_004787841.1 CDS Murru_1378 NC_015945.1 1507274 1508335 D PFAM: Glycosyltransferase family 9 (heptosyltransferase); COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: fbc:FB2170_05710 heptosyltransferase; PFAM: Glycosyl transferase, family 9; SPTR: Heptosyltransferase; glycosyl transferase family protein 1507274..1508335 Muricauda ruestringensis DSM 13258 11054202 YP_004787842.1 CDS Murru_1379 NC_015945.1 1508455 1509282 D hypothetical protein 1508455..1509282 Muricauda ruestringensis DSM 13258 11054203 YP_004787843.1 CDS Murru_1380 NC_015945.1 1509300 1509917 D hypothetical protein 1509300..1509917 Muricauda ruestringensis DSM 13258 11054204 YP_004787844.1 CDS Murru_1381 NC_015945.1 1509943 1511031 R PFAM: Radical SAM superfamily; Protein of unknown function (DUF3641); COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: fbc:FB2170_05700 hypothetical protein; PFAM: Radical SAM; SPTR: Putative uncharacterized protein; radical SAM protein complement(1509943..1511031) Muricauda ruestringensis DSM 13258 11054205 YP_004787845.1 CDS Murru_1382 NC_015945.1 1511046 1511381 R PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain; InterPro IPR003779:IPR004675; KEGG: fbc:FB2170_05695 carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase; SPTR: Carboxymuconolactone decarboxylase; TIGRFAM: Alkylhydroperoxidase AhpD core; alkylhydroperoxidase complement(1511046..1511381) Muricauda ruestringensis DSM 13258 11054206 YP_004787846.1 CDS Murru_1383 NC_015945.1 1511695 1512255 R PFAM: Fasciclin domain; COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: rbi:RB2501_10307 hypothetical protein; PFAM: FAS1 domain; SMART: FAS1 domain; SPTR: Putative uncharacterized protein; beta-Ig-H3/fasciclin complement(1511695..1512255) Muricauda ruestringensis DSM 13258 11054207 YP_004787847.1 CDS Murru_1384 NC_015945.1 1512414 1513187 D PFAM: Patatin-like phospholipase; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: rbi:RB2501_06605 hypothetical protein; PFAM: Patatin/Phospholipase A2-related; SPTR: Putative uncharacterized protein; patatin 1512414..1513187 Muricauda ruestringensis DSM 13258 11054208 YP_004787848.1 CDS Murru_1385 NC_015945.1 1513200 1514246 R PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterPro IPR008333:IPR001433:IPR001041; KEGG: fbc:FB2170_05685 phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: Ferredoxin; Oxidoreductase, FAD-binding domain; Oxidoreductase FAD/NAD(P)-binding; SPTR: Phenylacetate-CoA oxygenase/reductase, PaaK subunit; ferredoxin complement(1513200..1514246) Muricauda ruestringensis DSM 13258 11054209 YP_004787849.1 CDS Murru_1386 NC_015945.1 1514367 1515836 D KEGG: rbi:RB2501_06595 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1514367..1515836 Muricauda ruestringensis DSM 13258 11054210 YP_004787850.1 CDS Murru_1387 NC_015945.1 1515857 1516552 D PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_05660 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative ATP-binding component of ABC transporter protein; ABC transporter-like protein 1515857..1516552 Muricauda ruestringensis DSM 13258 11054211 YP_004787851.1 CDS Murru_1388 NC_015945.1 1516684 1519185 D KEGG: fbc:FB2170_05655 TPR domain-containing protein; SPTR: TPR domain protein; hypothetical protein 1516684..1519185 Muricauda ruestringensis DSM 13258 11054212 YP_004787852.1 CDS Murru_1389 NC_015945.1 1519207 1519626 D PFAM: Protein of unknown function, DUF583; COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: fbc:FB2170_05650 hypothetical protein; PFAM: Protein of unknown function DUF583; SPTR: Putative uncharacterized protein; hypothetical protein 1519207..1519626 Muricauda ruestringensis DSM 13258 11054213 YP_004787853.1 CDS Murru_1390 NC_015945.1 1519604 1519831 D KEGG: mtt:Ftrac_2565 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1519604..1519831 Muricauda ruestringensis DSM 13258 11054214 YP_004787854.1 CDS Murru_1391 NC_015945.1 1519828 1520217 D SPTR: Putative uncharacterized protein; hypothetical protein 1519828..1520217 Muricauda ruestringensis DSM 13258 11054215 YP_004787855.1 CDS Murru_1392 NC_015945.1 1520300 1521469 D PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); COGs: COG0356 F0F1-type ATP synthase subunit a; HAMAP: ATPase, F0 complex, subunit A; InterPro IPR000568; KEGG: mtt:Ftrac_2567 ATP synthase f0 subcomplex A subunit; PFAM: ATPase, F0 complex, subunit A; SPTR: ATP synthase subunit a; TIGRFAM: ATPase, F0 complex, subunit A; ATP synthase subunit a 1520300..1521469 Muricauda ruestringensis DSM 13258 11054216 YP_004787856.1 CDS Murru_1393 NC_015945.1 1521505 1521699 D PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c; HAMAP: ATPase, F0 complex, subunit C; InterPro IPR000454:IPR002379; KEGG: fjo:Fjoh_1056 H+-transporting two-sector ATPase, C subunit; PFAM: ATPase, F0/V0 complex, subunit C; SPTR: Putative uncharacterized protein; ATP synthase subunit c 1521505..1521699 Muricauda ruestringensis DSM 13258 11054217 YP_004787857.1 CDS Murru_1394 NC_015945.1 1521777 1522277 D PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b; COGs: COG0711 F0F1-type ATP synthase subunit b; HAMAP: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; InterPro IPR002146:IPR005864; KEGG: fbc:FB2170_05620 ATP synthase F0 subunit B; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; SPTR: ATP synthase subunit b; TIGRFAM: ATPase, F0 complex, subunit B, bacterial; ATP synthase subunit b 1521777..1522277 Muricauda ruestringensis DSM 13258 11054218 YP_004787858.1 CDS Murru_1395 NC_015945.1 1522282 1522821 D PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit; COGs: COG0712 F0F1-type ATP synthase delta subunit (mitochondrial oligomycin sensitivity protein); HAMAP: ATPase, F1 complex, OSCP/delta subunit; InterPro IPR000711; KEGG: fbc:FB2170_05615 ATP synthase subunit D; PFAM: ATPase, F1 complex, OSCP/delta subunit; SPTR: ATP synthase subunit D; TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; ATP synthase subunit delta 1522282..1522821 Muricauda ruestringensis DSM 13258 11054219 YP_004787859.1 CDS Murru_1396 NC_015945.1 1522824 1524404 D PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit; COGs: COG0056 F0F1-type ATP synthase alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; InterPro IPR005294:IPR004100:IPR000194:IPR000793; KEGG: rbi:RB2501_06545 F0F1 ATP synthase subunit alpha; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; SPTR: ATP synthase subunit alpha; TIGRFAM: ATPase, F1 complex, alpha subunit; ATP synthase subunit alpha 1522824..1524404 Muricauda ruestringensis DSM 13258 11054220 YP_004787860.1 CDS Murru_1397 NC_015945.1 1524422 1524760 D PFAM: S23 ribosomal protein; TIGRFAM: TIGR02436 family protein; InterPro IPR012657; KEGG: nam:NAMH_1650 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02436; hypothetical protein 1524422..1524760 Muricauda ruestringensis DSM 13258 11054221 YP_004787861.1 CDS Murru_1398 NC_015945.1 1524791 1525651 D PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit; COGs: COG0224 F0F1-type ATP synthase gamma subunit; HAMAP: ATPase, F1 complex, gamma subunit; InterPro IPR000131; KEGG: rbi:RB2501_06540 ATP synthase F1 subunit gamma; PFAM: ATPase, F1 complex, gamma subunit; SPTR: ATP synthase gamma chain; TIGRFAM: ATPase, F1 complex, gamma subunit; ATP synthase subunit gamma 1524791..1525651 Muricauda ruestringensis DSM 13258 11054222 YP_004787862.1 CDS Murru_1399 NC_015945.1 1525789 1527252 D PFAM: Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: rbi:RB2501_06530 polysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; SPTR: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 1525789..1527252 Muricauda ruestringensis DSM 13258 11054223 YP_004787863.1 CDS Murru_1400 NC_015945.1 1527242 1527676 D PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut); COGs: COG0756 dUTPase; HAMAP: DeoxyUTP pyrophosphatase; InterPro IPR008181:IPR008180; KEGG: cat:CA2559_03550 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: DeoxyUTP pyrophosphatase domain; PRIAM: dUTP diphosphatase; SPTR: Deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: DeoxyUTP pyrophosphatase; deoxyuridine 5'-triphosphate nucleotidohydrolase 1527242..1527676 Muricauda ruestringensis DSM 13258 11054224 YP_004787864.1 CDS Murru_1401 NC_015945.1 1527764 1528780 D PFAM: Nucleotidyl transferase; COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005835; KEGG: fjo:Fjoh_1064 nucleotidyl transferase; PFAM: Nucleotidyl transferase; SPTR: Glucose-1-phosphate thymidyltransferase; manually curated; nucleotidyltransferase 1527764..1528780 Muricauda ruestringensis DSM 13258 11054225 YP_004787865.1 CDS Murru_1402 NC_015945.1 1528850 1529746 D KEGG: rbi:RB2501_06520 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1528850..1529746 Muricauda ruestringensis DSM 13258 11054226 YP_004787866.1 CDS Murru_1403 NC_015945.1 1529746 1530525 D KEGG: fbc:FB2170_05585 deoxyuridine 5'-triphosphate nucleotidohydrolase; SPTR: Deoxyuridine 5'-triphosphate nucleotidohydrolase; deoxyuridine 5'-triphosphate nucleotidohydrolase 1529746..1530525 Muricauda ruestringensis DSM 13258 11054227 YP_004787867.1 CDS Murru_1404 NC_015945.1 1530527 1531753 D PFAM: Peptidase family M23; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: fbc:FB2170_05580 putative peptidase; PFAM: Peptidase M23; SPTR: Putative peptidase; peptidase M23 1530527..1531753 Muricauda ruestringensis DSM 13258 11054228 YP_004787868.1 CDS Murru_1405 NC_015945.1 1531758 1532594 D PFAM: Aldo/keto reductase family; COGs: COG0656 Aldo/keto reductase related to diketogulonate reductase; InterPro IPR023210; KEGG: fbc:FB2170_05575 aldo/keto reductase family oxidoreductase; PFAM: NADP-dependent oxidoreductase domain; PRIAM: Methylglyoxal reductase (NADPH-dependent); SPTR: Oxidoreductase, aldo/keto reductase family protein; methylglyoxal reductase 1531758..1532594 Muricauda ruestringensis DSM 13258 11054229 YP_004787869.1 CDS Murru_1406 NC_015945.1 1532598 1533110 R PFAM: Thioesterase superfamily; COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: fbc:FB2170_05570 thioesterase domain-containing protein; PFAM: Thioesterase superfamily; SPTR: Thioesterase superfamily protein; thioesterase superfamily protein complement(1532598..1533110) Muricauda ruestringensis DSM 13258 11054230 YP_004787870.1 CDS Murru_1407 NC_015945.1 1533172 1534116 R PFAM: Sporulation related domain; InterPro IPR007730; KEGG: fbc:FB2170_05560 hypothetical protein; PFAM: Sporulation-related domain; SPTR: Putative uncharacterized protein; manually curated; sporulation domain-containing protein complement(1533172..1534116) Muricauda ruestringensis DSM 13258 11054231 YP_004787871.1 CDS Murru_1408 NC_015945.1 1534222 1535328 D PFAM: DNA recombination-mediator protein A; TIGRFAM: DNA protecting protein DprA; COGs: COG0758 Rossmann fold nucleotide-binding protein involved in DNA uptake; InterPro IPR003488; KEGG: gfo:GFO_3252 smf family protein; PFAM: DNA recombination-mediator protein A; SPTR: DNA processing protein; TIGRFAM: DNA recombination-mediator protein A; DNA protecting protein DprA 1534222..1535328 Muricauda ruestringensis DSM 13258 11054232 YP_004787872.1 CDS Murru_1409 NC_015945.1 1535416 1536555 R PFAM: SPFH domain / Band 7 family; COGs: COG4260 Putative virion core protein (lumpy skin disease virus); KEGG: fbc:FB2170_06775 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1535416..1536555) Muricauda ruestringensis DSM 13258 11054233 YP_004787873.1 CDS Murru_1410 NC_015945.1 1536659 1537786 R PFAM: Peptidase family S58; COGs: COG3191 L-aminopeptidase/D-esterase; InterPro IPR005321; KEGG: fbc:FB2170_11636 peptidase family T4; PFAM: Peptidase S58, DmpA; SPTR: Peptidase family T4; peptidase S58 DmpA complement(1536659..1537786) Muricauda ruestringensis DSM 13258 11054234 YP_004787874.1 CDS Murru_1411 NC_015945.1 1537797 1538300 R KEGG: zpr:ZPR_3644 putative metal-dependent hydrolase; SPTR: Putative uncharacterized protein; putative metal-dependent hydrolase complement(1537797..1538300) Muricauda ruestringensis DSM 13258 11054235 YP_004787875.1 CDS Murru_1412 NC_015945.1 1538316 1539740 R PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: fbc:FB2170_09286 hypothetical protein; PFAM: Oxidoreductase, N-terminal; SPTR: Putative uncharacterized protein; oxidoreductase domain-containing protein complement(1538316..1539740) Muricauda ruestringensis DSM 13258 11054236 YP_004787876.1 CDS Murru_1413 NC_015945.1 1539750 1540541 R PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: rbi:RB2501_06280 putative secreted glycosyl hydrolase; PFAM: Protein of unknown function DUF1080; SPTR: Probable secreted glycosyl hydrolase; hypothetical protein complement(1539750..1540541) Muricauda ruestringensis DSM 13258 11054237 YP_004787877.1 CDS Murru_1414 NC_015945.1 1540649 1543783 D PFAM: BNR/Asp-box repeat; InterPro IPR002860; KEGG: rbi:RB2501_06335 hypothetical protein; PFAM: BNR repeat; SPTR: Putative uncharacterized protein; glycosyl hydrolase family protein 1540649..1543783 Muricauda ruestringensis DSM 13258 11054238 YP_004787878.1 CDS Murru_1415 NC_015945.1 1543970 1547095 D PFAM: BNR/Asp-box repeat; InterPro IPR002860; KEGG: fbc:FB2170_05110 hypothetical protein; PFAM: BNR repeat; SPTR: Putative uncharacterized protein; glycosyl hydrolase family protein 1543970..1547095 Muricauda ruestringensis DSM 13258 11054239 YP_004787879.1 CDS Murru_1416 NC_015945.1 1547114 1547659 D PFAM: Uncharacterised protein family (UPF0093); TIGRFAM: TIGR00701 family protein; COGs: COG1981 membrane protein; InterPro IPR005265; KEGG: fbc:FB2170_05100 hypothetical protein; PFAM: Uncharacterised protein family UPF0093; SPTR: Putative uncharacterized protein; hypothetical protein 1547114..1547659 Muricauda ruestringensis DSM 13258 11054240 YP_004787880.1 CDS Murru_1417 NC_015945.1 1547748 1548236 D PFAM: DNA mismatch endonuclease Vsr; Protein of unknown function (DUF559); TIGRFAM: DNA mismatch endonuclease Vsr; COGs: COG3727 DNA G:T-mismatch repair endonuclease; InterPro IPR004603:IPR007569; KEGG: fbc:FB2170_05415 putative very-short-patch-repair endonuclease; PFAM: DNA mismatch endonuclease vsr; Domain of unknown function DUF559; SPTR: Putative very-short-patch-repair endonuclease; TIGRFAM: DNA mismatch endonuclease vsr; DNA mismatch endonuclease Vsr 1547748..1548236 Muricauda ruestringensis DSM 13258 11054241 YP_004787881.1 CDS Murru_1418 NC_015945.1 1548211 1548915 R PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: sss:SSUSC84_1375 putative DNA-binding phage protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative phage repressor; helix-turn-helix domain-containing protein complement(1548211..1548915) Muricauda ruestringensis DSM 13258 11054242 YP_004787882.1 CDS Murru_1419 NC_015945.1 1549056 1549376 D hypothetical protein 1549056..1549376 Muricauda ruestringensis DSM 13258 11054243 YP_004787883.1 CDS Murru_1420 NC_015945.1 1549362 1549880 R PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: fbc:FB2170_05445 transcriptional regulator; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Transcriptional regulator; N-acetyltransferase GCN5 complement(1549362..1549880) Muricauda ruestringensis DSM 13258 11054244 YP_004787884.1 CDS Murru_1421 NC_015945.1 1549966 1550070 R hypothetical protein complement(1549966..1550070) Muricauda ruestringensis DSM 13258 11054245 YP_004787885.1 CDS Murru_1422 NC_015945.1 1550202 1550855 R PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; COGs: COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit; InterPro IPR004165:IPR012791; KEGG: gfo:GFO_3238 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B; PFAM: Coenzyme A transferase; PRIAM: 3-oxoacid CoA-transferase; SMART: Coenzyme A transferase; SPTR: Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B; TIGRFAM: 3-oxoacid CoA-transferase, subunit B; 3-oxoacid CoA-transferase subunit B complement(1550202..1550855) Muricauda ruestringensis DSM 13258 11054246 YP_004787886.1 CDS Murru_1423 NC_015945.1 1550855 1551196 R KEGG: fbc:FB2170_05460 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1550855..1551196) Muricauda ruestringensis DSM 13258 11054247 YP_004787887.1 CDS Murru_1424 NC_015945.1 1551193 1551894 R PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; COGs: COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase alpha subunit; InterPro IPR004165:IPR012792; KEGG: fbc:FB2170_05465 3-oxoacid CoA-transferase subunit A; PFAM: Coenzyme A transferase; PRIAM: 3-oxoacid CoA-transferase; SMART: Coenzyme A transferase; SPTR: 3-oxoacid CoA-transferase subunit A; TIGRFAM: 3-oxoacid CoA-transferase, subunit A; 3-oxoacid CoA-transferase subunit A complement(1551193..1551894) Muricauda ruestringensis DSM 13258 11054248 YP_004787888.1 CDS Murru_1425 NC_015945.1 1551995 1554325 R PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; COGs: COG5009 Membrane carboxypeptidase/penicillin-binding protein; InterPro IPR001264:IPR001460; KEGG: rbi:RB2501_06430 penicillin-binding protein 1A (PBP-1a); PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Penicillin-binding protein 1A (PBP-1a); peptidoglycan glycosyltransferase complement(1551995..1554325) Muricauda ruestringensis DSM 13258 11054249 YP_004787889.1 CDS Murru_1426 NC_015945.1 1554325 1554816 R TIGRFAM: gliding motility-associated lipoprotein GldH; InterPro IPR020018; KEGG: zpr:ZPR_0091 gliding motility lipoprotein GldH-like protein; SPTR: Gliding motility lipoprotein gldH-like protein; TIGRFAM: Gliding motility-associated lipoprotein, GldH; gliding motility-associated lipoprotein GldH complement(1554325..1554816) Muricauda ruestringensis DSM 13258 11054250 YP_004787890.1 CDS Murru_1427 NC_015945.1 1554806 1555963 R PFAM: PSP1 C-terminal conserved region; COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557; KEGG: zpr:ZPR_0090 PSP1 domain-containing protein; PFAM: PSP1, C-terminal; SPTR: PSP1 domain protein; PSP1 domain-containing protein complement(1554806..1555963) Muricauda ruestringensis DSM 13258 11054251 YP_004787891.1 CDS Murru_1428 NC_015945.1 1556169 1557200 R PFAM: Rhodanese-like domain; COGs: COG1054 sulfurtransferase; HAMAP: Uncharacterised protein family UPF0176; InterPro IPR020936:IPR001763; KEGG: fbc:FB2170_05490 hypothetical protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: UPF0176 protein FB2170_05490; hypothetical protein complement(1556169..1557200) Muricauda ruestringensis DSM 13258 11054252 YP_004787892.1 CDS Murru_1429 NC_015945.1 1557476 1558483 D PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA; COGs: COG0468 RecA/RadA recombinase; HAMAP: DNA recombination and repair protein RecA; InterPro IPR013765:IPR003593; KEGG: fbc:FB2170_05505 recombinase A; PFAM: DNA recombination and repair protein RecA; SMART: ATPase, AAA+ type, core; SPTR: Protein recA; TIGRFAM: DNA recombination and repair protein RecA; protein recA 1557476..1558483 Muricauda ruestringensis DSM 13258 11054253 YP_004787893.1 CDS Murru_1430 NC_015945.1 1558584 1559024 D KEGG: fbc:FB2170_05510 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1558584..1559024 Muricauda ruestringensis DSM 13258 11054254 YP_004787894.1 CDS Murru_1431 NC_015945.1 1559054 1559584 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: rbi:RB2501_06465 putative RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: Putative RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 1559054..1559584 Muricauda ruestringensis DSM 13258 11054255 YP_004787895.1 CDS Murru_1432 NC_015945.1 1559597 1561048 D KEGG: rbi:RB2501_06470 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1559597..1561048 Muricauda ruestringensis DSM 13258 11054256 YP_004787896.1 CDS Murru_1433 NC_015945.1 1561122 1562357 D PFAM: Histidine kinase; GAF domain; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR003018:IPR010559; KEGG: dfe:Dfer_1503 putative phytochrome sensor protein; PFAM: Signal transduction histidine kinase, internal region; GAF; SMART: GAF; SPTR: Putative orphan protein ; putative GGDEF protein; putative signal transduction histidine kinase 1561122..1562357 Muricauda ruestringensis DSM 13258 11054257 YP_004787897.1 CDS Murru_1434 NC_015945.1 1562361 1564211 D PFAM: Histidine kinase; 7TM diverse intracellular signalling; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: cpi:Cpin_1400 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; SPTR: Possible sensor protein; putative signal transduction histidine kinase 1562361..1564211 Muricauda ruestringensis DSM 13258 11054258 YP_004787898.1 CDS Murru_1435 NC_015945.1 1564217 1564954 R PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: fbc:FB2170_05530 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Putative 1-acyl-sn-glycerol-3-phosphate acyltransferase; phospholipid/glycerol acyltransferase complement(1564217..1564954) Muricauda ruestringensis DSM 13258 11054259 YP_004787899.1 CDS Murru_1436 NC_015945.1 1565012 1565254 D PFAM: Transglycosylase associated protein; InterPro IPR007341; KEGG: lby:Lbys_3051 transglycosylase-associated protein; PFAM: Transglycosylase-associated protein; SPTR: Putative membrane protein; transglycosylase 1565012..1565254 Muricauda ruestringensis DSM 13258 11054260 YP_004787900.1 CDS Murru_1437 NC_015945.1 1565342 1566310 D PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; COGs: COG0180 Tryptophanyl-tRNA synthetase; InterPro IPR002305:IPR002306; KEGG: fbc:FB2170_05535 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; PRIAM: Tryptophan--tRNA ligase; SPTR: Tryptophanyl-tRNA synthetase; TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; tryptophanyl-tRNA synthetase 1565342..1566310 Muricauda ruestringensis DSM 13258 11054261 YP_004787901.1 CDS Murru_1438 NC_015945.1 1566609 1567682 R PFAM: Radical SAM superfamily; COGs: COG1533 DNA repair photolyase; InterPro IPR006638:IPR007197; KEGG: fbc:FB2170_05080 radical SAM; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein; radical SAM protein complement(1566609..1567682) Muricauda ruestringensis DSM 13258 11054262 YP_004787902.1 CDS Murru_1439 NC_015945.1 1568662 1569624 R KEGG: pyo:PY00324 hypothetical protein; SPTR: Putative uncharacterized protein PY00324; hypothetical protein complement(1568662..1569624) Muricauda ruestringensis DSM 13258 11054263 YP_004787903.1 CDS Murru_1440 NC_015945.1 1570345 1571898 R KEGG: fbc:FB2170_05085 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1570345..1571898) Muricauda ruestringensis DSM 13258 11054264 YP_004787904.1 CDS Murru_1441 NC_015945.1 1571923 1572705 R PFAM: Enoyl-CoA hydratase/isomerase family; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: fbc:FB2170_05090 enoyl-CoA hydratase; PFAM: Crotonase, core; PRIAM: Enoyl-CoA hydratase; SPTR: Enoyl-CoA hydratase; enoyl-CoA hydratase complement(1571923..1572705) Muricauda ruestringensis DSM 13258 11054265 YP_004787905.1 CDS Murru_1442 NC_015945.1 1572748 1574160 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR003661:IPR003594:IPR003660; KEGG: rbi:RB2501_05875 sensory transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Sensory transduction histidine kinase; integral membrane sensor signal transduction histidine kinase complement(1572748..1574160) Muricauda ruestringensis DSM 13258 11054266 YP_004787906.1 CDS Murru_1443 NC_015945.1 1574668 1575414 R PFAM: 2Fe-2S iron-sulfur cluster binding domain; TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR001041:IPR004489; KEGG: rbi:RB2501_06375 succinate dehydrogenase/fumarate reductase iron-sulfur subunit; PFAM: Ferredoxin; SPTR: Succinate dehydrogenase; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; succinate dehydrogenase and fumarate reductase iron-sulfur protein complement(1574668..1575414) Muricauda ruestringensis DSM 13258 11054267 YP_004787907.1 CDS Murru_1444 NC_015945.1 1575442 1575834 R PFAM: S23 ribosomal protein; InterPro IPR008815; KEGG: ppn:Palpr_1064 hypothetical protein; PFAM: 23S rRNA-associated protein; SPTR: Putative uncharacterized protein; S23 ribosomal protein complement(1575442..1575834) Muricauda ruestringensis DSM 13258 11054268 YP_004787908.1 CDS Murru_1445 NC_015945.1 1575890 1577893 R PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR003953:IPR004112:IPR011280; KEGG: zpr:ZPR_0231 succinate dehydrogenase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; PRIAM: Succinate dehydrogenase; SPTR: Succinate dehydrogenase; TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, low-GC Gram-positive bacteria; succinate dehydrogenase or fumarate reductase, flavoprotein subunit complement(1575890..1577893) Muricauda ruestringensis DSM 13258 11054269 YP_004787909.1 CDS Murru_1446 NC_015945.1 1577896 1578564 R TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; InterPro IPR011138; KEGG: rbi:RB2501_06365 succinate dehydrogenase, cytochrome b558 subunit; SPTR: Succinate dehydrogenase, cytochrome b558 subunit; TIGRFAM: Succinate dehydrogenase, cytochrome b558 subunit; succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family complement(1577896..1578564) Muricauda ruestringensis DSM 13258 11054270 YP_004787910.1 CDS Murru_1447 NC_015945.1 1578737 1579627 D PFAM: RimK-like ATP-grasp domain; TIGRFAM: alpha-L-glutamate ligases, RimK family; COGs: COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase); InterPro IPR013651:IPR004666; KEGG: fbc:FB2170_05395 ribosomal protein S6 modification protein; PFAM: ATP-grasp fold, RimK-type; SPTR: Ribosomal protein S6 modification protein; TIGRFAM: S6 modification enzyme RimK; RimK family alpha-L-glutamate ligase 1578737..1579627 Muricauda ruestringensis DSM 13258 11054271 YP_004787911.1 CDS Murru_1448 NC_015945.1 1579649 1580080 R KEGG: zpr:ZPR_3566 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1579649..1580080) Muricauda ruestringensis DSM 13258 11054272 YP_004787912.1 CDS Murru_1449 NC_015945.1 1580265 1580654 R PFAM: Protein of unknown function (DUF2721); KEGG: rbi:RB2501_06355 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1580265..1580654) Muricauda ruestringensis DSM 13258 11054273 YP_004787913.1 CDS Murru_1450 NC_015945.1 1580734 1582026 D PFAM: Aminopeptidase P, N-terminal domain; Metallopeptidase family M24; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR007865:IPR000994; KEGG: fbc:FB2170_05355 Xaa-Pro aminopeptidase; PFAM: Peptidase M24, structural domain; Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal; SPTR: Xaa-Pro aminopeptidase; peptidase M24 1580734..1582026 Muricauda ruestringensis DSM 13258 11054274 YP_004787914.1 CDS Murru_1451 NC_015945.1 1582032 1582208 D SPTR: Putative uncharacterized protein; hypothetical protein 1582032..1582208 Muricauda ruestringensis DSM 13258 11054275 YP_004787915.1 CDS Murru_1452 NC_015945.1 1582280 1583374 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: rbi:RB2501_10852 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase 1582280..1583374 Muricauda ruestringensis DSM 13258 11054276 YP_004787916.1 CDS Murru_1453 NC_015945.1 1583598 1584245 D PFAM: Cation efflux family; COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: ppn:Palpr_1037 cation efflux protein; PFAM: Cation efflux protein; SPTR: Putative uncharacterized protein; cation efflux protein 1583598..1584245 Muricauda ruestringensis DSM 13258 11054277 YP_004787917.1 CDS Murru_1454 NC_015945.1 1584433 1585242 D PFAM: Domain of unknown function (DUF1963); hypothetical protein 1584433..1585242 Muricauda ruestringensis DSM 13258 11054278 YP_004787918.1 CDS Murru_1455 NC_015945.1 1585270 1585878 D PFAM: Methyltransferase domain; InterPro IPR013217; KEGG: fbc:FB2170_01567 hypothetical protein; PFAM: Methyltransferase type 12; SPTR: Putative uncharacterized protein; type 12 methyltransferase 1585270..1585878 Muricauda ruestringensis DSM 13258 11054279 YP_004787919.1 CDS Murru_1456 NC_015945.1 1585875 1587182 R PFAM: Branched-chain amino acid transport protein; TIGRFAM: branched-chain amino acid uptake carrier; COGs: COG1114 Branched-chain amino acid permease; InterPro IPR004685; KEGG: fbc:FB2170_05320 branched-chain amino acid transport system carrier protein; PFAM: Branched-chain amino acid transport system II carrier protein; SPTR: Branched-chain amino acid transport system carrier protein; TIGRFAM: Branched-chain amino acid transport system II carrier protein; branched-chain amino acid transport system II carrier protein complement(1585875..1587182) Muricauda ruestringensis DSM 13258 11054280 YP_004787920.1 CDS Murru_1457 NC_015945.1 1587426 1587680 D KEGG: rbi:RB2501_05890 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1587426..1587680 Muricauda ruestringensis DSM 13258 11054281 YP_004787921.1 CDS Murru_1458 NC_015945.1 1587800 1588852 R PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase; COGs: COG0611 Thiamine monophosphate kinase; InterPro IPR000728:IPR010918:IPR006283; KEGG: fbc:FB2170_05310 putative thiamine-monophosphate kinase; PFAM: AIR synthase-related protein; AIR synthase-related protein, C-terminal; PRIAM: Thiamine-phosphate kinase; SPTR: Putative thiamine-monophosphate kinase; TIGRFAM: Thiamine-monophosphate kinase; thiamine-monophosphate kinase complement(1587800..1588852) Muricauda ruestringensis DSM 13258 11054282 YP_004787922.1 CDS Murru_1459 NC_015945.1 1589100 1589429 D PFAM: Iron-sulphur cluster biosynthesis; TIGRFAM: Iron-sulfur cluster assembly accessory protein; COGs: COG0316 conserved hypothetical protein; InterPro IPR000361:IPR016092; KEGG: rbi:RB2501_05910 scaffold protein for iron-sulfur cluster assembly; PFAM: FeS cluster biogenesis; SPTR: Scaffold protein for iron-sulfur cluster assembly; TIGRFAM: FeS cluster insertion; iron-sulfur cluster assembly accessory protein 1589100..1589429 Muricauda ruestringensis DSM 13258 11054283 YP_004787923.1 CDS Murru_1460 NC_015945.1 1589470 1590915 D PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufB; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825:IPR010231; KEGG: zpr:ZPR_0215 cysteine desulfurase activator complex subunit SufB; PFAM: SUF system FeS cluster assembly, SufBD; SPTR: Cysteine desulfurase activator complex subunit SufB; TIGRFAM: SUF system FeS cluster assembly, SufB; FeS assembly protein SufB 1589470..1590915 Muricauda ruestringensis DSM 13258 11054284 YP_004787924.1 CDS Murru_1461 NC_015945.1 1590952 1591701 D PFAM: ABC transporter; TIGRFAM: FeS assembly ATPase SufC; COGs: COG0396 ABC-type transport system involved in Fe-S cluster assembly ATPase component; InterPro IPR003593:IPR003439:IPR010230; KEGG: fps:FP2392 Fe-S assembly ATPase, SufC; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Fe-S assembly ATPase, SufC; TIGRFAM: ATPase SufC, SUF system FeS cluster assembly; FeS assembly ATPase SufC 1590952..1591701 Muricauda ruestringensis DSM 13258 11054285 YP_004787925.1 CDS Murru_1462 NC_015945.1 1591745 1592134 D PFAM: S23 ribosomal protein; InterPro IPR008815; KEGG: zpr:ZPR_0216 S23 ribosomal protein; PFAM: 23S rRNA-associated protein; SPTR: S23 ribosomal protein; S23 ribosomal protein 1591745..1592134 Muricauda ruestringensis DSM 13258 11054286 YP_004787926.1 CDS Murru_1463 NC_015945.1 1592172 1593494 D PFAM: Uncharacterized protein family (UPF0051); TIGRFAM: FeS assembly protein SufD; COGs: COG0719 ABC-type transport system involved in Fe-S cluster assembly permease component; InterPro IPR000825:IPR011542; KEGG: fbc:FB2170_05275 FeS assembly protein SufD; PFAM: SUF system FeS cluster assembly, SufBD; SPTR: FeS assembly protein SufD; TIGRFAM: SUF system FeS cluster assembly, SufD; FeS assembly protein SufD 1592172..1593494 Muricauda ruestringensis DSM 13258 11054287 YP_004787927.1 CDS Murru_1464 NC_015945.1 1593593 1594264 D KEGG: zpr:ZPR_1870 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1593593..1594264 Muricauda ruestringensis DSM 13258 11054288 YP_004787928.1 CDS Murru_1465 NC_015945.1 1594264 1595490 D PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurases, SufS subfamily; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192:IPR010970; KEGG: fbc:FB2170_05270 cysteine desulphurase SufS; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Selenocysteine lyase; SPTR: Cysteine desulfurase; TIGRFAM: Cysteine desulfurase, SufS; SufS subfamily cysteine desulfurase 1594264..1595490 Muricauda ruestringensis DSM 13258 11054289 YP_004787929.1 CDS Murru_1466 NC_015945.1 1595563 1595985 D PFAM: Fe-S metabolism associated domain; COGs: COG2166 SufE protein probably involved in Fe-S center assembly; InterPro IPR003808; KEGG: fbc:FB2170_05265 hypothetical protein; PFAM: Fe-S metabolism associated SufE; SPTR: Putative uncharacterized protein; Fe-S metabolism associated SufE 1595563..1595985 Muricauda ruestringensis DSM 13258 11054290 YP_004787930.1 CDS Murru_1467 NC_015945.1 1595992 1596321 D PFAM: Domain of unknown function DUF59; TIGRFAM: FeS assembly SUF system protein; COGs: COG2151 metal-sulfur cluster biosynthetic protein; InterPro IPR002744; KEGG: rbi:RB2501_05940 hypothetical protein; PFAM: Domain of unknown function DUF59; SPTR: Putative uncharacterized protein; hypothetical protein 1595992..1596321 Muricauda ruestringensis DSM 13258 11054291 YP_004787931.1 CDS Murru_1468 NC_015945.1 1596582 1597091 D PFAM: Protein of unknown function (DUF2480); InterPro IPR018914; KEGG: fbc:FB2170_05255 hypothetical protein; PFAM: Protein of unknown function DUF2480; SPTR: Putative uncharacterized protein; hypothetical protein 1596582..1597091 Muricauda ruestringensis DSM 13258 11054292 YP_004787932.1 CDS Murru_1469 NC_015945.1 1597361 1598293 D PFAM: Protein of unknown function (DUF3078); KEGG: rbi:RB2501_05950 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1597361..1598293 Muricauda ruestringensis DSM 13258 11054293 YP_004787933.1 CDS Murru_1470 NC_015945.1 1598974 1601922 D PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Bacterial regulatory helix-turn-helix proteins, AraC family; Tetratricopeptide repeat; COGs: COG0642 Signal transduction histidine kinase; InterProIPR019734:IPR003661:IPR003594:IPR001789:IPR 018060:IPR001440:IPR000005; KEGG: rbi:RB2501_14219 putative two-component system sensor kinase/response regulator fusion protein; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Tetratricopeptide TPR-1; Signal transduction response regulator, receiver domain; HTH transcriptional regulator, AraC; SMART: Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Tetratricopeptide repeat; Helix-turn-helix, AraC type, DNA binding domain; SPTR: Putative two-component system sensor kinase/response regulator fusion protein; ATP-binding protein 1598974..1601922 Muricauda ruestringensis DSM 13258 11054294 YP_004787934.1 CDS Murru_1471 NC_015945.1 1602068 1602640 D KEGG: rbi:RB2501_14214 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1602068..1602640 Muricauda ruestringensis DSM 13258 11054295 YP_004787935.1 CDS Murru_1472 NC_015945.1 1602689 1603402 D KEGG: kol:Kole_0169 fibronectin type III domain protein; SPTR: Fibronectin type III domain protein; hypothetical protein 1602689..1603402 Muricauda ruestringensis DSM 13258 11054296 YP_004787936.1 CDS Murru_1473 NC_015945.1 1603431 1604642 R PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; small GTP-binding protein domain; COGs: COG2262 GTPase; InterPro IPR002917:IPR016496:IPR005225; KEGG: fbc:FB2170_05245 GTP-binding protein HflX; PFAM: GTP-binding protein, HSR1-related; SPTR: GTP-binding protein HflX; TIGRFAM: GTP-binding protein, HflX; Small GTP-binding protein; GTP-binding proten HflX complement(1603431..1604642) Muricauda ruestringensis DSM 13258 11054297 YP_004787937.1 CDS Murru_1474 NC_015945.1 1604672 1605688 D PFAM: Endonuclease/Exonuclease/phosphatase family; InterPro IPR005135; KEGG: fbc:FB2170_05240 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Putative uncharacterized protein; endonuclease/exonuclease/phosphatase 1604672..1605688 Muricauda ruestringensis DSM 13258 11054298 YP_004787938.1 CDS Murru_1475 NC_015945.1 1605841 1608033 D PFAM: Subtilase family; InterPro IPR003961:IPR000209; KEGG: mtt:Ftrac_1522 fibronectin type III domain protein; PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; Fibronectin, type III; SMART: Fibronectin, type III; SPTR: Putative surface protein; peptidase S8 and S53 subtilisin kexin sedolisin 1605841..1608033 Muricauda ruestringensis DSM 13258 11054299 YP_004787939.1 CDS Murru_1476 NC_015945.1 1608073 1608786 R PFAM: Predicted 3'-5' exonuclease related to the exonuclease domain of PolB; InterPro IPR019288; KEGG: fbc:FB2170_05225 hypothetical protein; PFAM: 3'-5' exonuclease, PolB-like; SPTR: Putative uncharacterized protein; 3'-5' exonuclease complement(1608073..1608786) Muricauda ruestringensis DSM 13258 11054300 YP_004787940.1 CDS Murru_1477 NC_015945.1 1608796 1609266 R PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; COGs: COG0350 Methylated DNA-protein cysteine methyltransferase; InterPro IPR014048; KEGG: fbc:FB2170_05215 methylated-DNA--protein-cysteine S-methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; SPTR: Methylated-DNA--protein-cysteine S-methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; methylated-DNA--protein-cysteine methyltransferase complement(1608796..1609266) Muricauda ruestringensis DSM 13258 11054301 YP_004787941.1 CDS Murru_1478 NC_015945.1 1609266 1610387 R PFAM: CBS domain; Domain of unknown function DUF21; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550:IPR000644; KEGG: fbc:FB2170_05210 hypothetical protein; PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; SPTR: Putative uncharacterized protein; hypothetical protein complement(1609266..1610387) Muricauda ruestringensis DSM 13258 11054302 YP_004787942.1 CDS Murru_1479 NC_015945.1 1610428 1611813 R PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: fbc:FB2170_05205 beta-N-acetylglucosaminidase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase complement(1610428..1611813) Muricauda ruestringensis DSM 13258 11054303 YP_004787943.1 CDS Murru_1480 NC_015945.1 1611791 1611976 R hypothetical protein complement(1611791..1611976) Muricauda ruestringensis DSM 13258 11054304 YP_004787944.1 CDS Murru_1481 NC_015945.1 1611999 1613285 R KEGG: pru:PRU_0337 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1611999..1613285) Muricauda ruestringensis DSM 13258 11054305 YP_004787945.1 CDS Murru_1482 NC_015945.1 1613304 1614293 R PFAM: Delta-aminolevulinic acid dehydratase; COGs: COG0113 Delta-aminolevulinic acid dehydratase; InterPro IPR001731; KEGG: fbc:FB2170_05200 delta-aminolevulinic acid dehydratase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase; PRIAM: Porphobilinogen synthase; SPTR: Delta-aminolevulinic acid dehydratase; porphobilinogen synthase complement(1613304..1614293) Muricauda ruestringensis DSM 13258 11054306 YP_004787946.1 CDS Murru_1483 NC_015945.1 1614343 1615131 R PFAM: Phenazine biosynthesis-like protein; TIGRFAM: phenazine biosynthesis protein PhzF family; COGs: COG0384 epimerase PhzC/PhzF homolog; InterPro IPR003719; KEGG: fbc:FB2170_05190 putative epimerase PhzC/PhzF-like protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein; SPTR: Predicted epimerase PhzC/PhzF-like protein; TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein; phenazine biosynthesis protein PhzF family protein complement(1614343..1615131) Muricauda ruestringensis DSM 13258 11054307 YP_004787947.1 CDS Murru_1484 NC_015945.1 1615184 1616167 R PFAM: D12 class N6 adenine-specific DNA methyltransferase; TIGRFAM: DNA adenine methylase (dam); COGs: COG0338 Site-specific DNA methylase; InterPro IPR012327; KEGG: hps:HPSH_07080 adenine-specific DNA metylase; PFAM: D12 class N6 adenine-specific DNA methyltransferase; SPTR: Adenine-specific DNA metylase; TIGRFAM: D12 class N6 adenine-specific DNA methyltransferase; DNA adenine methylase complement(1615184..1616167) Muricauda ruestringensis DSM 13258 11054308 YP_004787948.1 CDS Murru_1485 NC_015945.1 1616164 1617012 R PFAM: Restriction endonuclease EcoRV; InterPro IPR015314; KEGG: hps:HPSH_07075 type II restriction endonuclease; PFAM: Restriction endonuclease, type II, EcoRV; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Type II restriction endonuclease; type II site-specific deoxyribonuclease complement(1616164..1617012) Muricauda ruestringensis DSM 13258 11054309 YP_004787949.1 CDS Murru_1486 NC_015945.1 1617107 1618009 R PFAM: Coproporphyrinogen III oxidase; COGs: COG0408 Coproporphyrinogen III oxidase; InterPro IPR001260; KEGG: fbc:FB2170_05175 coproporphyrinogen III oxidase; PFAM: Coproporphyrinogen III oxidase; PRIAM: Coproporphyrinogen oxidase; SPTR: Coproporphyrinogen III oxidase; coproporphyrinogen oxidase complement(1617107..1618009) Muricauda ruestringensis DSM 13258 11054310 YP_004787950.1 CDS Murru_1487 NC_015945.1 1618012 1618497 R KEGG: zpr:ZPR_0109 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1618012..1618497) Muricauda ruestringensis DSM 13258 11054311 YP_004787951.1 CDS Murru_1488 NC_015945.1 1618494 1619519 R PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase; COGs: COG0407 Uroporphyrinogen-III decarboxylase; HAMAP: Uroporphyrinogen decarboxylase HemE; InterPro IPR006361:IPR000257; KEGG: fbc:FB2170_05165 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); PRIAM: Uroporphyrinogen decarboxylase; SPTR: Uroporphyrinogen decarboxylase; TIGRFAM: Uroporphyrinogen decarboxylase HemE; uroporphyrinogen decarboxylase complement(1618494..1619519) Muricauda ruestringensis DSM 13258 11054312 YP_004787952.1 CDS Murru_1489 NC_015945.1 1619609 1620268 R PFAM: Uroporphyrinogen-III synthase HemD; COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: gfo:GFO_3225 uroporphyrinogen-III synthase; PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; SPTR: DNA methylase, putative; uroporphyrinogen III synthase HEM4 complement(1619609..1620268) Muricauda ruestringensis DSM 13258 11054313 YP_004787953.1 CDS Murru_1490 NC_015945.1 1620246 1621172 R PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase; COGs: COG0181 Porphobilinogen deaminase; InterPro IPR022417:IPR022418:IPR000860; KEGG: cat:CA2559_03640 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase, N-terminal; Porphobilinogen deaminase, C-terminal domain; SPTR: Porphobilinogen deaminase; TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; porphobilinogen deaminase complement(1620246..1621172) Muricauda ruestringensis DSM 13258 11054314 YP_004787954.1 CDS Murru_1491 NC_015945.1 1621169 1622425 R PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase; COGs: COG0373 Glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; InterPro IPR000343:IPR015895:IPR006151:IPR015896; KEGG: fbc:FB2170_05155 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain; SPTR: Glutamyl-tRNA reductase; TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; glutamyl-tRNA reductase complement(1621169..1622425) Muricauda ruestringensis DSM 13258 11054315 YP_004787955.1 CDS Murru_1492 NC_015945.1 1622606 1623514 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: fbc:FB2170_05150 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator; AraC family transcriptional regulator 1622606..1623514 Muricauda ruestringensis DSM 13258 11054316 YP_004787956.1 CDS Murru_1493 NC_015945.1 1623525 1624280 D PFAM: Trehalose utilisation; COGs: COG3828 conserved hypothetical protein; KEGG: sli:Slin_4030 PKD domain containing protein; SPTR: PKD domain containing protein; PKD domain-containing protein 1623525..1624280 Muricauda ruestringensis DSM 13258 11054317 YP_004787957.1 CDS Murru_1494 NC_015945.1 1624266 1625117 R PFAM: Protein of unknown function (DUF1460); InterPro IPR010846; KEGG: rbi:RB2501_06030 hypothetical protein; PFAM: Protein of unknown function DUF1460; SPTR: Putative uncharacterized protein; hypothetical protein complement(1624266..1625117) Muricauda ruestringensis DSM 13258 11054318 YP_004787958.1 CDS Murru_1495 NC_015945.1 1625107 1626243 R PFAM: Mechanosensitive ion channel; COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: rbi:RB2501_06035 membrane protein; PFAM: Mechanosensitive ion channel MscS; SPTR: Membrane protein; mechanosensitive ion channel protein MscS complement(1625107..1626243) Muricauda ruestringensis DSM 13258 11054319 YP_004787959.1 CDS Murru_1496 NC_015945.1 1626294 1627373 D PFAM: Ferrochelatase; TIGRFAM: ferrochelatase; COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); HAMAP: Ferrochelatase; InterPro IPR001015; KEGG: fbc:FB2170_05140 ferrochelatase; PFAM: Ferrochelatase; PRIAM: Ferrochelatase; SPTR: Ferrochelatase; TIGRFAM: Ferrochelatase; ferrochelatase 1626294..1627373 Muricauda ruestringensis DSM 13258 11054320 YP_004787960.1 CDS Murru_1497 NC_015945.1 1627404 1628780 D PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: rbi:RB2501_06050 Na+-driven multidrug efflux pump; PFAM: Multi antimicrobial extrusion protein; SPTR: Na+-driven multidrug efflux pump; TIGRFAM: Multi antimicrobial extrusion protein; MATE efflux family protein 1627404..1628780 Muricauda ruestringensis DSM 13258 11054321 YP_004787961.1 CDS Murru_1498 NC_015945.1 1628834 1629934 D PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; COGs: COG2706 3-carboxymuconate cyclase; KEGG: fbc:FB2170_05130 hypothetical protein; PRIAM: 6-phosphogluconolactonase; SPTR: Putative uncharacterized protein; 6-phosphogluconolactonase 1628834..1629934 Muricauda ruestringensis DSM 13258 11054322 YP_004787962.1 CDS Murru_1499 NC_015945.1 1630088 1630732 R KEGG: ehi:EHI_131230 actin; SPTR: Actin, putative; hypothetical protein complement(1630088..1630732) Muricauda ruestringensis DSM 13258 11054323 YP_004787963.1 CDS Murru_1500 NC_015945.1 1630753 1630959 R hypothetical protein complement(1630753..1630959) Muricauda ruestringensis DSM 13258 11054324 YP_004787964.1 CDS Murru_1501 NC_015945.1 1631020 1631952 R PFAM: Prolyl oligopeptidase family; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR001375; KEGG: fps:FP1243 peptidase; SPTR: Probable peptidase; peptidase complement(1631020..1631952) Muricauda ruestringensis DSM 13258 11054325 YP_004787965.1 CDS Murru_1502 NC_015945.1 1631962 1633056 R KEGG: fbc:FB2170_06780 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1631962..1633056) Muricauda ruestringensis DSM 13258 11054326 YP_004787966.1 CDS Murru_1503 NC_015945.1 1633312 1633485 D hypothetical protein 1633312..1633485 Muricauda ruestringensis DSM 13258 11054327 YP_004787967.1 CDS Murru_1504 NC_015945.1 1633713 1635137 R PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR006311; KEGG: rbi:RB2501_05855 putative dehydrogenase; PFAM: Oxidoreductase, N-terminal; SPTR: Putative dehydrogenase; oxidoreductase domain-containing protein complement(1633713..1635137) Muricauda ruestringensis DSM 13258 11054328 YP_004787968.1 CDS Murru_1505 NC_015945.1 1635201 1635863 R PFAM: HD domain; COGs: COG1418 HD superfamily hydrolase; InterPro IPR003607:IPR006674; KEGG: gfo:GFO_3211 HD domain-containing protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: HD superfamily phosphohydrolase; metal dependent phosphohydrolase complement(1635201..1635863) Muricauda ruestringensis DSM 13258 11054329 YP_004787969.1 CDS Murru_1506 NC_015945.1 1635860 1636594 R PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: fbc:FB2170_05070 1-acyl-sn-glycerol-3-phosphate acetyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: 1-acyl-sn-glycerol-3-phosphate acetyltransferase, putative; manually curated; phospholipid/glycerol acyltransferase complement(1635860..1636594) Muricauda ruestringensis DSM 13258 11054330 YP_004787970.1 CDS Murru_1507 NC_015945.1 1636830 1637240 R PFAM: Protein of unknown function (DUF1094); InterPro IPR009474; KEGG: fbc:FB2170_05065 hypothetical protein; PFAM: Uncharacterised protein family UPF0403; SPTR: Putative uncharacterized protein; hypothetical protein complement(1636830..1637240) Muricauda ruestringensis DSM 13258 11054331 YP_004787971.1 CDS Murru_1508 NC_015945.1 1637363 1638100 D PFAM: DnaJ domain; Tellurite resistance protein TerB; COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR001623; KEGG: fbc:FB2170_05060 putative heat shock protein DnaJ; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Putative heat shock protein DnaJ; heat shock protein DnaJ domain-containing protein 1637363..1638100 Muricauda ruestringensis DSM 13258 11054332 YP_004787972.1 CDS Murru_1509 NC_015945.1 1638097 1639329 R COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625; KEGG: zpr:ZPR_0424 putative sulfite reductase flavoprotein component; SPTR: Putative sulfite reductase flavoprotein component; putative sulfite reductase flavoprotein component complement(1638097..1639329) Muricauda ruestringensis DSM 13258 11054333 YP_004787973.1 CDS Murru_1510 NC_015945.1 1639372 1639956 D KEGG: fbc:FB2170_05055 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1639372..1639956 Muricauda ruestringensis DSM 13258 11054334 YP_004787974.1 CDS Murru_1511 NC_015945.1 1640041 1640478 D PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; COGs: COG2131 Deoxycytidylate deaminase; InterPro IPR002125; KEGG: fbc:FB2170_05050 deoxycytidylate deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: Deoxycytidylate deaminase; CMP/dCMP deaminase zinc-binding protein 1640041..1640478 Muricauda ruestringensis DSM 13258 11054335 YP_004787975.1 CDS Murru_1512 NC_015945.1 1640494 1642122 D PFAM: Peptidase family S41; TIGRFAM: C-terminal peptidase (prc); COGs: COG0793 Periplasmic protease; InterPro IPR001478:IPR005151:IPR004447; KEGG: fbc:FB2170_05045 carboxy-terminal processing protease; PFAM: Peptidase S41; SMART: Peptidase S41; PDZ/DHR/GLGF; SPTR: Carboxy-terminal processing protease; TIGRFAM: Peptidase S41A, C-terminal peptidase; carboxyl-terminal protease 1640494..1642122 Muricauda ruestringensis DSM 13258 11054336 YP_004787976.1 CDS Murru_1513 NC_015945.1 1642124 1642324 R KEGG: fbc:FB2170_05040 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1642124..1642324) Muricauda ruestringensis DSM 13258 11054337 YP_004787977.1 CDS Murru_1514 NC_015945.1 1642334 1642918 R PFAM: MarC family integral membrane protein; TIGRFAM: membrane protein, MarC family; COGs: COG2095 Multiple antibiotic transporter; InterPro IPR002771; KEGG: fbc:FB2170_05035 putative transmembrane protein; PFAM: Multiple antibiotic resistance (MarC)-related; SPTR: Multiple antibiotic resistance (MarC)-related protein; TIGRFAM: Multiple antibiotic resistance (MarC)-related; multiple antibiotic resistance (MarC)-like protein complement(1642334..1642918) Muricauda ruestringensis DSM 13258 11054338 YP_004787978.1 CDS Murru_1515 NC_015945.1 1643042 1643611 D PFAM: Protein of unknown function (DUF3109); KEGG: fbc:FB2170_05030 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1643042..1643611 Muricauda ruestringensis DSM 13258 11054339 YP_004787979.1 CDS Murru_1516 NC_015945.1 1643604 1645571 R PFAM: Histidine kinase; Tetratricopeptide repeat; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR019734:IPR001440:IPR013105:IPR010559; KEGG: fbc:FB2170_05025 putative two-component system sensor histidine kinase; PFAM: Signal transduction histidine kinase, internal region; Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: Putative two-component system sensor histidine kinase; putative signal transduction histidine kinase complement(1643604..1645571) Muricauda ruestringensis DSM 13258 11054340 YP_004787980.1 CDS Murru_1517 NC_015945.1 1645587 1646321 R PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: fbc:FB2170_05020 autolysin response regulator; PFAM: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Autolysin response regulator; LytTR family two component transcriptional regulator complement(1645587..1646321) Muricauda ruestringensis DSM 13258 11054341 YP_004787981.1 CDS Murru_1518 NC_015945.1 1647445 1648098 R KEGG: fbc:FB2170_04985 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1647445..1648098) Muricauda ruestringensis DSM 13258 11054342 YP_004787982.1 CDS Murru_1519 NC_015945.1 1648098 1649816 R PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076:IPR000172; KEGG: rbi:RB2501_05745 GMC family oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; FAD dependent oxidoreductase; SPTR: Oxidoreductase, GMC family protein; glucose-methanol-choline oxidoreductase complement(1648098..1649816) Muricauda ruestringensis DSM 13258 11054343 YP_004787983.1 CDS Murru_1520 NC_015945.1 1649953 1650951 D PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: fbc:FB2170_04975 AP endonuclease, family 2; PFAM: Xylose isomerase, TIM barrel domain; SPTR: AP endonuclease, family 2; xylose isomerase domain-containing protein 1649953..1650951 Muricauda ruestringensis DSM 13258 11054344 YP_004787984.1 CDS Murru_1521 NC_015945.1 1650975 1651418 D PFAM: DinB family; COGs: COG2318 conserved hypothetical protein; InterPro IPR007837; KEGG: rbi:RB2501_05735 hypothetical protein; PFAM: DinB; SPTR: Putative uncharacterized protein; DinB family protein 1650975..1651418 Muricauda ruestringensis DSM 13258 11054345 YP_004787985.1 CDS Murru_1522 NC_015945.1 1651442 1652671 D PFAM: Nucleoside H+ symporter; TIGRFAM: nucleoside transporter; KEGG: zpr:ZPR_2440 nucleoside:proton symporter; SPTR: Nucleoside:H+ symporter; nucleoside:proton symporter 1651442..1652671 Muricauda ruestringensis DSM 13258 11054346 YP_004787986.1 CDS Murru_1523 NC_015945.1 1652700 1653938 D PFAM: Major Facilitator Superfamily; InterPro IPR011701; KEGG: rbi:RB2501_05725 hypothetical protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Putative uncharacterized protein; major facilitator superfamily protein 1652700..1653938 Muricauda ruestringensis DSM 13258 11054347 YP_004787987.1 CDS Murru_1524 NC_015945.1 1653961 1655097 D PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: rbi:RB2501_05720 Gfo/Idh/MocA family oxidoreductase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase, Gfo/Idh/MocA family protein; oxidoreductase domain-containing protein 1653961..1655097 Muricauda ruestringensis DSM 13258 11054348 YP_004787988.1 CDS Murru_1525 NC_015945.1 1655151 1655615 R PFAM: ASCH domain; COGs: COG4405 conserved hypothetical protein; InterPro IPR007374; KEGG: fbc:FB2170_04955 hypothetical protein; PFAM: ASCH domain; SPTR: Putative uncharacterized protein; ASCH domain-containing protein complement(1655151..1655615) Muricauda ruestringensis DSM 13258 11054349 YP_004787989.1 CDS Murru_1526 NC_015945.1 1655778 1656830 D PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307:IPR011418; KEGG: fbc:FB2170_04950 hypothetical protein; PFAM: Xylose isomerase, TIM barrel domain; AP endonuclease, family 2, C-terminal; SPTR: Putative uncharacterized protein; xylose isomerase domain-containing protein 1655778..1656830 Muricauda ruestringensis DSM 13258 11054350 YP_004787990.1 CDS Murru_1527 NC_015945.1 1656827 1657588 D PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: rbi:RB2501_05695 putative secreted glycosyl hydrolase; PFAM: Protein of unknown function DUF1080; SPTR: Probable secreted glycosyl hydrolase; hypothetical protein 1656827..1657588 Muricauda ruestringensis DSM 13258 11054351 YP_004787991.1 CDS Murru_1528 NC_015945.1 1657590 1658345 D PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: rbi:RB2501_05690 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: Putative multi-domain protein; hypothetical protein 1657590..1658345 Muricauda ruestringensis DSM 13258 11054352 YP_004787992.1 CDS Murru_1529 NC_015945.1 1658431 1659288 D PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); Uncharacterized protein conserved in bacteria (DUF2333); TIGRFAM: TIGR00255 family protein; COGs: COG1561 Uncharacterized stress-induced protein; InterPro IPR013527:IPR013551:IPR005229; KEGG: fbc:FB2170_04945 hypothetical protein; PFAM: YicC-like, N-terminal; Domain of unknown function DUF1732; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00255; hypothetical protein 1658431..1659288 Muricauda ruestringensis DSM 13258 11054353 YP_004787993.1 CDS Murru_1530 NC_015945.1 1659285 1659881 D PFAM: Guanylate kinase; TIGRFAM: guanylate kinase; COGs: COG0194 Guanylate kinase; HAMAP: Guanylate kinase, sub-group; InterPro IPR008144:IPR008145:IPR017665; KEGG: fbc:FB2170_04940 guanylate kinase; PFAM: Guanylate kinase; PRIAM: Guanylate kinase; SMART: Guanylate kinase/L-type calcium channel; SPTR: Guanylate kinase; TIGRFAM: Guanylate kinase, sub-group; guanylate kinase 1659285..1659881 Muricauda ruestringensis DSM 13258 11054354 YP_004787994.1 CDS Murru_1531 NC_015945.1 1659885 1660469 D PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain; COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase; HAMAP: Probable nicotinate-nucleotide adenylyltransferase; InterPro IPR004820:IPR005248:IPR004821; KEGG: fbc:FB2170_04935 nicotinic acid mononucleotide adenyltransferase; PFAM: Cytidylyltransferase; PRIAM: Nicotinate-nucleotide adenylyltransferase; SPTR: Probable nicotinate-nucleotide adenylyltransferase; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; nicotinate-nucleotide adenylyltransferase 1659885..1660469 Muricauda ruestringensis DSM 13258 11054355 YP_004787995.1 CDS Murru_1532 NC_015945.1 1660472 1661578 R PFAM: Domain of unknown function (DUF377); COGs: COG2152 glycosylase; InterPro IPR007184; KEGG: zpr:ZPR_0445 glycosidase, PH1107-related protein; PFAM: Glycosidase, PH1107-related; SPTR: Glycosidase, PH1107-related protein; glycosidase-like protein complement(1660472..1661578) Muricauda ruestringensis DSM 13258 11054356 YP_004787996.1 CDS Murru_1533 NC_015945.1 1661584 1662282 R KEGG: fbc:FB2170_04915 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1661584..1662282) Muricauda ruestringensis DSM 13258 11054357 YP_004787997.1 CDS Murru_1534 NC_015945.1 1662335 1664629 R PFAM: Phosphate transporter family; COGs: COG0306 Phosphate/sulphate permease; KEGG: fbc:FB2170_04910 phosphate sodium symporter; SPTR: Phosphate sodium symporter; phosphate sodium symporter complement(1662335..1664629) Muricauda ruestringensis DSM 13258 11054358 YP_004787998.1 CDS Murru_1535 NC_015945.1 1664702 1665916 R PFAM: Phosphate-selective porin O and P; InterPro IPR010870; KEGG: fbc:FB2170_04855 phosphate-selective porin O and P; PFAM: Phosphate-selective porin O/P; SPTR: Phosphate-selective porin O and P; phosphate-selective porin O and P complement(1664702..1665916) Muricauda ruestringensis DSM 13258 11054359 YP_004787999.1 CDS Murru_1536 NC_015945.1 1666384 1667742 D PFAM: HD domain; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase, putative; COGs: COG0232 dGTP triphosphohydrolase; InterPro IPR006674:IPR003607:IPR006261; KEGG: fbc:FB2170_04850 dGTP triphosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; PRIAM: dGTPase; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: dGTP triphosphohydrolase; TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; deoxyguanosinetriphosphate triphosphohydrolase 1666384..1667742 Muricauda ruestringensis DSM 13258 11054360 YP_004788000.1 CDS Murru_1537 NC_015945.1 1667955 1669013 R PFAM: Protein of unknown function (DUF3078); KEGG: fbc:FB2170_04815 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1667955..1669013) Muricauda ruestringensis DSM 13258 11054361 YP_004788001.1 CDS Murru_1538 NC_015945.1 1669004 1670815 R PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase; COGs: COG1154 Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; InterPro IPR005475:IPR005476:IPR005477; KEGG: fbc:FB2170_04810 1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: 1-deoxy-D-xylulose-5-phosphate synthase; SMART: Transketolase-like, pyrimidine-binding domain; SPTR: 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: Deoxyxylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase complement(1669004..1670815) Muricauda ruestringensis DSM 13258 11054362 YP_004788002.1 CDS Murru_1539 NC_015945.1 1670867 1671316 D PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; COGs: COG0590 Cytosine/adenosine deaminase; InterPro IPR002125; KEGG: fbc:FB2170_04805 putative cytosine/adenosine deaminase; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: Putative cytosine/adenosine deaminase; CMP/dCMP deaminase zinc-binding protein 1670867..1671316 Muricauda ruestringensis DSM 13258 11054363 YP_004788003.1 CDS Murru_1540 NC_015945.1 1671372 1671566 R PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1278 Cold shock protein; InterPro IPR002059:IPR011129; KEGG: fbc:FB2170_04800 hypothetical protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Putative uncharacterized protein; cold-shock DNA-binding domain-containing protein complement(1671372..1671566) Muricauda ruestringensis DSM 13258 11054364 YP_004788004.1 CDS Murru_1541 NC_015945.1 1671648 1671908 R KEGG: fbc:FB2170_04795 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1671648..1671908) Muricauda ruestringensis DSM 13258 11054365 YP_004788005.1 CDS Murru_1542 NC_015945.1 1671905 1673689 R PFAM: CBS domain; Voltage gated chloride channel; COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807:IPR000644; KEGG: rbi:RB2501_05610 putative transport related, membrane protein; PFAM: Chloride channel, voltage gated; Cystathionine beta-synthase, core; SPTR: Putative transport related, membrane protein; Cl- channel voltage-gated family protein complement(1671905..1673689) Muricauda ruestringensis DSM 13258 11054366 YP_004788006.1 CDS Murru_1543 NC_015945.1 1673753 1675501 R PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type; COGs: COG0173 Aspartyl-tRNA synthetase; InterPro IPR004365:IPR004364:IPR004115:IPR004524; KEGG: cat:CA2559_01940 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain; PRIAM: Aspartate--tRNA ligase; SPTR: Aspartyl-tRNA synthetase; TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; aspartyl-tRNA synthetase complement(1673753..1675501) Muricauda ruestringensis DSM 13258 11054367 YP_004788007.1 CDS Murru_1544 NC_015945.1 1675866 1676216 D KEGG: rbi:RB2501_05660 nicotinic acid mononucleotide adenyltransferase; SPTR: Nicotinic acid mononucleotide adenyltransferase; nicotinic acid mononucleotide adenyltransferase 1675866..1676216 Muricauda ruestringensis DSM 13258 11054368 YP_004788008.1 CDS Murru_1545 NC_015945.1 1676295 1679789 R PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: rbi:RB2501_05600 AcrB/AcrD/AcrF family protein; PFAM: Acriflavin resistance protein; SPTR: AcrB/AcrD/AcrF family protein; acriflavin resistance protein complement(1676295..1679789) Muricauda ruestringensis DSM 13258 11054369 YP_004788009.1 CDS Murru_1546 NC_015945.1 1679799 1680983 R PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fbc:FB2170_04775 RND family efflux transporter MFP subunit; PFAM: Secretion protein HlyD; SPTR: Efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(1679799..1680983) Muricauda ruestringensis DSM 13258 11054370 YP_004788010.1 CDS Murru_1547 NC_015945.1 1681008 1682339 R PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fbc:FB2170_04770 outer membrane efflux protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux protein, putative; outer membrane efflux protein complement(1681008..1682339) Muricauda ruestringensis DSM 13258 11054371 YP_004788011.1 CDS Murru_1548 NC_015945.1 1682340 1682945 R PFAM: Bacterial regulatory proteins, tetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: rbi:RB2501_05585 hypothetical protein; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, tetR family protein; TetR family transcriptional regulator complement(1682340..1682945) Muricauda ruestringensis DSM 13258 11054372 YP_004788012.1 CDS Murru_1549 NC_015945.1 1683037 1683183 R hypothetical protein complement(1683037..1683183) Muricauda ruestringensis DSM 13258 11054373 YP_004788013.1 CDS Murru_1550 NC_015945.1 1683158 1683592 R KEGG: rbi:RB2501_05580 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1683158..1683592) Muricauda ruestringensis DSM 13258 11054374 YP_004788014.1 CDS Murru_1551 NC_015945.1 1683582 1684130 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: rbi:RB2501_05575 sigma-24 factor FecI; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: Sigma-24 (FecI); TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(1683582..1684130) Muricauda ruestringensis DSM 13258 11054375 YP_004788015.1 CDS Murru_1552 NC_015945.1 1684305 1685288 D PFAM: Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: fbc:FB2170_04750 putative isoprenoid biosynthesis related protein; PFAM: Polyprenyl synthetase; PRIAM: Geranyltranstransferase; SPTR: Putative isoprenyl synthetase; geranyltranstransferase 1684305..1685288 Muricauda ruestringensis DSM 13258 11054376 YP_004788016.1 CDS Murru_1553 NC_015945.1 1685285 1686427 R PFAM: Lycopene cyclase protein; TIGRFAM: lycopene cyclase family protein; InterPro IPR008671; KEGG: rbi:RB2501_05565 lycopene cyclase; PFAM: Lycopene cyclase-type, FAD-binding; SPTR: Lycopene cyclase; Lycopene beta and epsilon cyclase complement(1685285..1686427) Muricauda ruestringensis DSM 13258 11054377 YP_004788017.1 CDS Murru_1554 NC_015945.1 1686469 1686804 R PFAM: Protein of unknown function DUF86; COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: tba:TERMP_00142 hypothetical protein; PFAM: Protein of unknown function DUF86; SPTR: Putative toxin-antitoxin system, antitoxin component; hypothetical protein complement(1686469..1686804) Muricauda ruestringensis DSM 13258 11054378 YP_004788018.1 CDS Murru_1555 NC_015945.1 1686797 1687087 R PFAM: Nucleotidyltransferase domain; COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: dfe:Dfer_3676 DNA polymerase beta domain protein region; PFAM: Nucleotidyl transferase domain; SPTR: DNA polymerase beta domain protein region; DNA polymerase beta domain-containing protein complement(1686797..1687087) Muricauda ruestringensis DSM 13258 11054379 YP_004788019.1 CDS Murru_1556 NC_015945.1 1687161 1689431 R PFAM: TonB-dependent Receptor Plug Domain; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: rbi:RB2501_05560 putative TonB-dependent outer membrane receptor protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative TonB-dependent outer membrane receptor protein; TonB-dependent receptor plug complement(1687161..1689431) Muricauda ruestringensis DSM 13258 11054380 YP_004788020.1 CDS Murru_1557 NC_015945.1 1689472 1690167 D PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR022687:IPR001367:IPR007167:IPR022689; KEGG: rbi:RB2501_05555 iron dependent repressor; PFAM: Iron dependent repressor; Iron dependent repressor, N-terminal; Ferrous iron transporter, FeoA subunit; SMART: Iron dependent repressor, diptheria toxin type; SPTR: Iron dependent repressor; DtxR family iron (metal) dependent repressor 1689472..1690167 Muricauda ruestringensis DSM 13258 11054381 YP_004788021.1 CDS Murru_1558 NC_015945.1 1690167 1690988 D PFAM: ZIP Zinc transporter; COGs: COG0428 divalent heavy-metal cations transporter; InterPro IPR003689; KEGG: fbc:FB2170_04695 GufA protein; PFAM: Zinc/iron permease; SPTR: GufA protein; zinc/iron permease 1690167..1690988 Muricauda ruestringensis DSM 13258 11054382 YP_004788022.1 CDS Murru_1559 NC_015945.1 1690995 1692122 R TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fbc:FB2170_10626 cation efflux system protein; SPTR: Cation efflux system protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(1690995..1692122) Muricauda ruestringensis DSM 13258 11054383 YP_004788023.1 CDS Murru_1560 NC_015945.1 1692125 1696474 R PFAM: Outer membrane efflux protein; AcrB/AcrD/AcrF family; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 Putative silver efflux pump; InterPro IPR001036:IPR004763; KEGG: fbc:FB2170_10631 putative transport-related membrane protein; PFAM: Acriflavin resistance protein; SPTR: Putative transport-related membrane protein; TIGRFAM: Heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump complement(1692125..1696474) Muricauda ruestringensis DSM 13258 11054384 YP_004788024.1 CDS Murru_1561 NC_015945.1 1696552 1696950 R KEGG: fbc:FB2170_10636 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1696552..1696950) Muricauda ruestringensis DSM 13258 11054385 YP_004788025.1 CDS Murru_1562 NC_015945.1 1697042 1700158 R PFAM: BNR/Asp-box repeat; KEGG: sli:Slin_1570 glycosyl hydrolase BNR repeat-containing protein; SPTR: Putative glycosyl hydrolase, BNR repeat; glycosyl hydrolase family protein complement(1697042..1700158) Muricauda ruestringensis DSM 13258 11054386 YP_004788026.1 CDS Murru_1563 NC_015945.1 1700236 1700727 R KEGG: fba:FIC_02077 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1700236..1700727) Muricauda ruestringensis DSM 13258 11054387 YP_004788027.1 CDS Murru_1564 NC_015945.1 1700734 1701210 R KEGG: mtt:Ftrac_3185 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1700734..1701210) Muricauda ruestringensis DSM 13258 11054388 YP_004788028.1 CDS Murru_1565 NC_015945.1 1701217 1701972 R PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: gob:Gobs_3235 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(1701217..1701972) Muricauda ruestringensis DSM 13258 11054389 YP_004788029.1 CDS Murru_1566 NC_015945.1 1702078 1702503 D KEGG: fbc:FB2170_04655 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1702078..1702503 Muricauda ruestringensis DSM 13258 11054390 YP_004788030.1 CDS Murru_1567 NC_015945.1 1702537 1702944 D PFAM: Uncharacterized protein conserved in bacteria (DUF2141); COGs: COG4704 conserved hypothetical protein; InterPro IPR018673; KEGG: rbi:RB2501_05535 hypothetical protein; PFAM: Protein of unknown function DUF2141; SPTR: Putative uncharacterized protein; hypothetical protein 1702537..1702944 Muricauda ruestringensis DSM 13258 11054391 YP_004788031.1 CDS Murru_1568 NC_015945.1 1702955 1703347 D PFAM: Protein of unknown function (DUF423); COGs: COG2363 Uncharacterized small membrane protein; InterPro IPR006696; KEGG: fbc:FB2170_04650 hypothetical protein; PFAM: Protein of unknown function DUF423; SPTR: Putative uncharacterized protein; hypothetical protein 1702955..1703347 Muricauda ruestringensis DSM 13258 11054392 YP_004788032.1 CDS Murru_1569 NC_015945.1 1703344 1704057 R KEGG: zpr:ZPR_3205 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1703344..1704057) Muricauda ruestringensis DSM 13258 11054393 YP_004788033.1 CDS Murru_1570 NC_015945.1 1704162 1704914 R KEGG: zpr:ZPR_3204 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1704162..1704914) Muricauda ruestringensis DSM 13258 11054394 YP_004788034.1 CDS Murru_1571 NC_015945.1 1704935 1705771 R KEGG: zpr:ZPR_3203 anti-ECFsigma factor, ChrR; SPTR: Anti-ECFsigma factor, ChrR; anti-ECF sigma factor ChrR complement(1704935..1705771) Muricauda ruestringensis DSM 13258 11054395 YP_004788035.1 CDS Murru_1572 NC_015945.1 1705723 1706268 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: zpr:ZPR_3202 RNA polymerase, sigma-24 subunit, ECF subfamily protein; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily protein; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(1705723..1706268) Muricauda ruestringensis DSM 13258 11054396 YP_004788036.1 CDS Murru_1573 NC_015945.1 1706466 1706609 R hypothetical protein complement(1706466..1706609) Muricauda ruestringensis DSM 13258 11054397 YP_004788037.1 CDS Murru_1574 NC_015945.1 1706617 1708833 R PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain; COGs: COG0370 Fe2+ transport system protein B; InterProIPR002917:IPR011619:IPR011642:IPR011640:IPR 005225:IPR003373; KEGG: fbc:FB2170_04635 hypothetical protein; PFAM: Ferrous iron transport protein B, N-terminal; GTP-binding protein, HSR1-related; Nucleoside recognition; Ferrous iron transport protein B, C-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Ferrous iron transport protein B; Small GTP-binding protein; ferrous iron transport protein B complement(1706617..1708833) Muricauda ruestringensis DSM 13258 11054398 YP_004788038.1 CDS Murru_1575 NC_015945.1 1708830 1709072 R PFAM: FeoA domain; InterPro IPR007167; KEGG: fbc:FB2170_04630 putative ferrous iron transport protein A; PFAM: Ferrous iron transporter, FeoA subunit; SMART: Ferrous iron transporter, FeoA subunit; SPTR: Probable ferrous iron transport protein A; FeoA family protein complement(1708830..1709072) Muricauda ruestringensis DSM 13258 11054399 YP_004788039.1 CDS Murru_1576 NC_015945.1 1709162 1709836 R PFAM: SCO1/SenC; COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: fbc:FB2170_04625 hypothetical protein; PFAM: Copper chaperone SCO1/SenC; SPTR: Putative uncharacterized protein; electron transport protein SCO1/SenC complement(1709162..1709836) Muricauda ruestringensis DSM 13258 11054400 YP_004788040.1 CDS Murru_1577 NC_015945.1 1709964 1711343 D PFAM: Peptidase family M50; TIGRFAM: RIP metalloprotease RseP; COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR008915; KEGG: fbc:FB2170_04620 membrane-associated zinc metalloprotease; PFAM: Peptidase M50; SPTR: Membrane-associated zinc metalloprotease; peptidase M50 1709964..1711343 Muricauda ruestringensis DSM 13258 11054401 YP_004788041.1 CDS Murru_1578 NC_015945.1 1712403 1712726 D hypothetical protein 1712403..1712726 Muricauda ruestringensis DSM 13258 11054403 YP_004788042.1 CDS Murru_1579 NC_015945.1 1712756 1712848 D hypothetical protein 1712756..1712848 Muricauda ruestringensis DSM 13258 11054404 YP_004788043.1 CDS Murru_1581 NC_015945.1 1713414 1714079 D PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; COGs: COG0450 Peroxiredoxin; InterPro IPR000866:IPR019479; KEGG: zpr:ZPR_1796 antioxidant, AhpC/TSA family protein; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Peroxiredoxin, C-terminal; PRIAM: Peroxiredoxin; SPTR: Antioxidant, AhpC/TSA family protein; peroxiredoxin 1713414..1714079 Muricauda ruestringensis DSM 13258 11054406 YP_004788044.1 CDS Murru_1582 NC_015945.1 1714136 1715476 D PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279:IPR001763; KEGG: rbi:RB2501_09155 rhodanese-like protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; Rhodanese-like; SPTR: Rhodanese-like protein; beta-lactamase domain-containing protein 1714136..1715476 Muricauda ruestringensis DSM 13258 11054407 YP_004788045.1 CDS Murru_1583 NC_015945.1 1715473 1715952 D PFAM: Ferritin-like domain; COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR008331; KEGG: psm:PSM_A3059 DNA-binding DPS protein; PFAM: Ferritin/Dps protein; SPTR: DNA-binding DPS protein; ferritin Dps family protein 1715473..1715952 Muricauda ruestringensis DSM 13258 11054408 YP_004788046.1 CDS Murru_1584 NC_015945.1 1716048 1717382 D PFAM: Bacterial Cytochrome Ubiquinol Oxidase; COGs: COG1271 Cytochrome bd-type quinol oxidase subunit 1; InterPro IPR002585; KEGG: fjo:Fjoh_4879 cytochrome bd ubiquinol oxidase, subunit I; PFAM: Cytochrome d ubiquinol oxidase, subunit I; SPTR: Cytochrome bd ubiquinol oxidase, subunit I; cytochrome bd ubiquinol oxidase subunit I 1716048..1717382 Muricauda ruestringensis DSM 13258 11054409 YP_004788047.1 CDS Murru_1585 NC_015945.1 1717385 1718461 D PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB); COGs: COG1294 Cytochrome bd-type quinol oxidase subunit 2; InterPro IPR003317; KEGG: fjo:Fjoh_4878 cytochrome d ubiquinol oxidase, subunit II; PFAM: Cytochrome d ubiquinol oxidase, subunit II; SPTR: Cytochrome d ubiquinol oxidase, subunit II; TIGRFAM: Cytochrome d ubiquinol oxidase, subunit II; cytochrome d ubiquinol oxidase subunit II 1717385..1718461 Muricauda ruestringensis DSM 13258 11054410 YP_004788048.1 CDS Murru_1586 NC_015945.1 1719209 1719613 R PFAM: Response regulator receiver domain; InterPro IPR001789; KEGG: chu:CHU_3216 two-component response regulator, CheY-like; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Two-component response regulator, CheY-like; response regulator receiver complement(1719209..1719613) Muricauda ruestringensis DSM 13258 11054412 YP_004788049.1 CDS Murru_1587 NC_015945.1 1719716 1720129 R PFAM: YeeE/YedE family (DUF395); InterPro IPR007272; KEGG: zpr:ZPR_2396 YeeE/YedE domain-containing protein; PFAM: Domain of unknown function DUF395, YeeE/YedE; SPTR: YeeE/YedE domain-containing protein; hypothetical protein complement(1719716..1720129) Muricauda ruestringensis DSM 13258 11054413 YP_004788050.1 CDS Murru_1588 NC_015945.1 1720126 1720710 R PFAM: YeeE/YedE family (DUF395); InterPro IPR007272; KEGG: fbc:FB2170_01597 hypothetical protein; PFAM: Domain of unknown function DUF395, YeeE/YedE; SPTR: Putative uncharacterized protein; hypothetical protein complement(1720126..1720710) Muricauda ruestringensis DSM 13258 11054414 YP_004788051.1 CDS Murru_1589 NC_015945.1 1720743 1720946 R PFAM: Protein of unknown function (DUF2892); KEGG: fps:FP1808 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1720743..1720946) Muricauda ruestringensis DSM 13258 11054415 YP_004788052.1 CDS Murru_1590 NC_015945.1 1720957 1721262 R KEGG: fbc:FB2170_14843 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1720957..1721262) Muricauda ruestringensis DSM 13258 11054416 YP_004788053.1 CDS Murru_1591 NC_015945.1 1721368 1724562 R PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: fbc:FB2170_14848 transporter, AcrB/D/F family protein; PFAM: Acriflavin resistance protein; SPTR: Transporter, AcrB/D/F family protein; acriflavin resistance protein complement(1721368..1724562) Muricauda ruestringensis DSM 13258 11054417 YP_004788054.1 CDS Murru_1592 NC_015945.1 1724579 1725670 R PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: fbc:FB2170_14853 acriflavin resistance protein AcrE; PFAM: Secretion protein HlyD; SPTR: Secretion protein HlyD; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(1724579..1725670) Muricauda ruestringensis DSM 13258 11054418 YP_004788055.1 CDS Murru_1593 NC_015945.1 1725678 1726982 R PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fbc:FB2170_14858 outer membrane efflux family protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane efflux family protein, putative; outer membrane efflux protein complement(1725678..1726982) Muricauda ruestringensis DSM 13258 11054419 YP_004788056.1 CDS Murru_1594 NC_015945.1 1727147 1727245 R KEGG: fbc:FB2170_14868 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1727147..1727245) Muricauda ruestringensis DSM 13258 11054420 YP_004788057.1 CDS Murru_1595 NC_015945.1 1727288 1728745 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: fbc:FB2170_14873 sulfide-quinone reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Sulfide-quinone reductase, putative; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(1727288..1728745) Muricauda ruestringensis DSM 13258 11054421 YP_004788058.1 CDS Murru_1596 NC_015945.1 1729367 1729573 R PFAM: Protein of unknown function (DUF2892); KEGG: zpr:ZPR_1809 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1729367..1729573) Muricauda ruestringensis DSM 13258 11054422 YP_004788059.1 CDS Murru_1597 NC_015945.1 1729963 1730841 D PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: fbc:FB2170_14978 putative transmembrane protein; PFAM: Fatty acid hydroxylase; SPTR: Probable transmembrane protein; fatty acid hydroxylase 1729963..1730841 Muricauda ruestringensis DSM 13258 11054423 YP_004788060.1 CDS Murru_1598 NC_015945.1 1730845 1731444 R PFAM: Protein of unknown function (DUF3365); KEGG: fbc:FB2170_14983 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1730845..1731444) Muricauda ruestringensis DSM 13258 11054424 YP_004788061.1 CDS Murru_1599 NC_015945.1 1731444 1731713 R PFAM: Heavy-metal-associated domain; KEGG: fbc:FB2170_14988 heavy metal transport/detoxification protein; SPTR: Heavy metal transport/detoxification protein; manually curated; heavy metal transport/detoxification protein complement(1731444..1731713) Muricauda ruestringensis DSM 13258 11054425 YP_004788062.1 CDS Murru_1600 NC_015945.1 1731730 1732074 R PFAM: Rhodanese-like domain; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: zpr:ZPR_1797 rhodanese-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Rhodanese-like protein; rhodanese-like protein complement(1731730..1732074) Muricauda ruestringensis DSM 13258 11054426 YP_004788063.1 CDS Murru_1601 NC_015945.1 1732182 1733591 R PFAM: Metallo-beta-lactamase superfamily; Rhodanese-like domain; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; InterPro IPR001279:IPR001763; KEGG: fbc:FB2170_02165 metallo-beta-lactamase superfamily protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; Rhodanese-like; SPTR: Metallo-beta-lactamase superfamily protein; beta-lactamase domain-containing protein complement(1732182..1733591) Muricauda ruestringensis DSM 13258 11054427 YP_004788064.1 CDS Murru_1602 NC_015945.1 1733648 1735381 R PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547:IPR002645:IPR001902; KEGG: rbi:RB2501_07240 sulfate transporter; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Sulfate transporter; TIGRFAM: Sulphate anion transporter; sulfate transporter complement(1733648..1735381) Muricauda ruestringensis DSM 13258 11054428 YP_004788065.1 CDS Murru_1603 NC_015945.1 1735443 1736075 R PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595:IPR001808; KEGG: rbi:RB2501_07235 Crp family transcriptional regulator; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SPTR: Transcriptional regulator, Crp family protein; Crp/Fnr family transcriptional regulator complement(1735443..1736075) Muricauda ruestringensis DSM 13258 11054429 YP_004788066.1 CDS Murru_1604 NC_015945.1 1736190 1737314 R PFAM: Metalloenzyme superfamily; KEGG: pha:PSHAa1861 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1736190..1737314) Muricauda ruestringensis DSM 13258 11054430 YP_004788067.1 CDS Murru_1605 NC_015945.1 1737607 1739088 D PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018484:IPR018485; KEGG: rbi:RB2501_04535 putative xylulose kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; PRIAM: Xylulokinase; SPTR: Putative xylulose kinase; Xylulokinase 1737607..1739088 Muricauda ruestringensis DSM 13258 11054431 YP_004788068.1 CDS Murru_1606 NC_015945.1 1739104 1740429 D PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase; COGs: COG2115 Xylose isomerase; HAMAP: Xylose isomerase; InterPro IPR012307:IPR001998:IPR013452; KEGG: rbi:RB2501_04540 xylose isomerase; PFAM: Xylose isomerase, TIM barrel domain; PRIAM: Xylose isomerase; SPTR: Xylose isomerase; TIGRFAM: Xylose isomerase, bacterial type; Xylose isomerase 1739104..1740429 Muricauda ruestringensis DSM 13258 11054432 YP_004788069.1 CDS Murru_1607 NC_015945.1 1740489 1742138 D PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG4146 symporter; InterPro IPR001734:IPR019900; KEGG: rbi:RB2501_08550 putative symporter YidK; PFAM: Sodium/solute symporter; SPTR: Putative sodium/myo-inositol cotransporter; TIGRFAM: Sodium/solute symporter, subgroup; SSS sodium solute transporter superfamily protein 1740489..1742138 Muricauda ruestringensis DSM 13258 11054433 YP_004788070.1 CDS Murru_1608 NC_015945.1 1742288 1742980 R PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: fjo:Fjoh_2165 LytTR family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SMART: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SPTR: Two-component system response regulator protein; LytTR family two component transcriptional regulator complement(1742288..1742980) Muricauda ruestringensis DSM 13258 11054434 YP_004788071.1 CDS Murru_1609 NC_015945.1 1742984 1743982 R PFAM: Histidine kinase; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559; KEGG: gfo:GFO_2163 two-component system sensor histidine kinase; PFAM: Signal transduction histidine kinase, internal region; SPTR: Putative two-component system sensor but no kinase domain; putative signal transduction histidine kinase complement(1742984..1743982) Muricauda ruestringensis DSM 13258 11054435 YP_004788072.1 CDS Murru_1610 NC_015945.1 1744250 1744810 D PFAM: YceI-like domain; COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: rbi:RB2501_00491 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like; SPTR: Putative uncharacterized protein; hypothetical protein 1744250..1744810 Muricauda ruestringensis DSM 13258 11054436 YP_004788073.1 CDS Murru_1611 NC_015945.1 1745352 1746146 D KEGG: fbc:FB2170_06990 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1745352..1746146 Muricauda ruestringensis DSM 13258 11054437 YP_004788074.1 CDS Murru_1612 NC_015945.1 1746143 1748908 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_12426 putative TonB-dependent outer membrane receptor protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative TonB-dependent outer membrane receptor protein; TonB-dependent receptor plug 1746143..1748908 Muricauda ruestringensis DSM 13258 11054438 YP_004788075.1 CDS Murru_1613 NC_015945.1 1748920 1750089 D KEGG: fbc:FB2170_07000 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1748920..1750089 Muricauda ruestringensis DSM 13258 11054439 YP_004788076.1 CDS Murru_1614 NC_015945.1 1750102 1751850 D KEGG: fbc:FB2170_07005 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1750102..1751850 Muricauda ruestringensis DSM 13258 11054440 YP_004788077.1 CDS Murru_1615 NC_015945.1 1752029 1752337 D KEGG: rbi:RB2501_05250 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1752029..1752337 Muricauda ruestringensis DSM 13258 11054441 YP_004788078.1 CDS Murru_1616 NC_015945.1 1752342 1753283 R PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: fbc:FB2170_04450 putative oxidoreductase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: L-threonine 3-dehydrogenase; SPTR: Putative oxidoreductase protein; L-threonine 3-dehydrogenase complement(1752342..1753283) Muricauda ruestringensis DSM 13258 11054442 YP_004788079.1 CDS Murru_1617 NC_015945.1 1753348 1753845 D KEGG: fbc:FB2170_04445 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1753348..1753845 Muricauda ruestringensis DSM 13258 11054443 YP_004788080.1 CDS Murru_1618 NC_015945.1 1753835 1754335 D KEGG: cat:CA2559_04740 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1753835..1754335 Muricauda ruestringensis DSM 13258 11054444 YP_004788081.1 CDS Murru_1619 NC_015945.1 1754337 1755038 R KEGG: rbi:RB2501_05225 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1754337..1755038) Muricauda ruestringensis DSM 13258 11054445 YP_004788082.1 CDS Murru_1620 NC_015945.1 1755120 1755929 R PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR006115; KEGG: fbc:FB2170_04415 hypothetical protein; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; SPTR: Putative uncharacterized protein; manually curated; 6-phosphogluconate dehydrogenase complement(1755120..1755929) Muricauda ruestringensis DSM 13258 11054446 YP_004788083.1 CDS Murru_1621 NC_015945.1 1755922 1758192 R PFAM: Peptidase family M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: fbc:FB2170_04410 peptidase, M20/M25/M40 family protein; PFAM: Peptidase M28; SPTR: Peptidase, M20/M25/M40 family protein; manually curated; peptidase M28 complement(1755922..1758192) Muricauda ruestringensis DSM 13258 11054447 YP_004788084.1 CDS Murru_1622 NC_015945.1 1758228 1758785 D PFAM: CBS domain; COGs: COG2524 transcriptional regulator protein; InterPro IPR000644; KEGG: rbi:RB2501_05205 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain protein; putative signal transduction protein 1758228..1758785 Muricauda ruestringensis DSM 13258 11054448 YP_004788085.1 CDS Murru_1623 NC_015945.1 1758798 1759151 R KEGG: fbc:FB2170_04400 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1758798..1759151) Muricauda ruestringensis DSM 13258 11054449 YP_004788086.1 CDS Murru_1624 NC_015945.1 1759161 1759733 R PFAM: Pentapeptide repeats (8 copies); InterPro IPR001646; KEGG: fbc:FB2170_04390 hypothetical protein; PFAM: Pentapeptide repeat; SPTR: Putative uncharacterized protein; pentapeptide repeat-containing protein complement(1759161..1759733) Muricauda ruestringensis DSM 13258 11054450 YP_004788087.1 CDS Murru_1625 NC_015945.1 1759733 1762882 R PFAM: BNR/Asp-box repeat; InterPro IPR002860; KEGG: fbc:FB2170_04380 hypothetical protein; PFAM: BNR repeat; SPTR: Putative uncharacterized protein; glycosyl hydrolase family protein complement(1759733..1762882) Muricauda ruestringensis DSM 13258 11054451 YP_004788088.1 CDS Murru_1626 NC_015945.1 1763132 1763623 R KEGG: fbc:FB2170_04395 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1763132..1763623) Muricauda ruestringensis DSM 13258 11054452 YP_004788089.1 CDS Murru_1627 NC_015945.1 1763657 1764355 R PFAM: Protein of unknown function (DUF541); InterPro IPR007497; KEGG: rbi:RB2501_03085 hypothetical protein; PFAM: Protein of unknown function DUF541; SPTR: Putative uncharacterized protein; hypothetical protein complement(1763657..1764355) Muricauda ruestringensis DSM 13258 11054453 YP_004788090.1 CDS Murru_1628 NC_015945.1 1764479 1765615 D PFAM: Glycerate kinase family; TIGRFAM: glycerate kinase; COGs: COG1929 Glycerate kinase; InterPro IPR004381; KEGG: fbc:FB2170_06465 hypothetical protein; PFAM: Glycerate kinase; PRIAM: Glycerate kinase; SPTR: Putative uncharacterized protein; TIGRFAM: Glycerate kinase; glycerate kinase 1764479..1765615 Muricauda ruestringensis DSM 13258 11054454 YP_004788091.1 CDS Murru_1629 NC_015945.1 1765612 1766214 R PFAM: Acetyltransferase (GNAT) family; COGs: COG1670 Acetyltransferase including N-acetylase of ribosomal protein; InterPro IPR000182; KEGG: vfm:VFMJ11_A0648 acetyltransferase, GNAT family; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Acetyltransferase, gnat family; N-acetyltransferase GCN5 complement(1765612..1766214) Muricauda ruestringensis DSM 13258 11054455 YP_004788092.1 CDS Murru_1630 NC_015945.1 1766422 1766892 R KEGG: rbi:RB2501_15084 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1766422..1766892) Muricauda ruestringensis DSM 13258 11054456 YP_004788093.1 CDS Murru_1631 NC_015945.1 1766946 1767440 R PFAM: Ferritin-like domain; COGs: COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); InterPro IPR008331; KEGG: mtt:Ftrac_2175 ferritin dps family protein; PFAM: Ferritin/Dps protein; SPTR: Starvation-inducible DNA-binding protein homolog; ferritin Dps family protein complement(1766946..1767440) Muricauda ruestringensis DSM 13258 11054457 YP_004788094.1 CDS Murru_1632 NC_015945.1 1767688 1767945 R hypothetical protein complement(1767688..1767945) Muricauda ruestringensis DSM 13258 11054458 YP_004788095.1 CDS Murru_1633 NC_015945.1 1768111 1768443 D PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR000424:IPR011344; KEGG: fbc:FB2170_04360 single-strand binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; single-strand binding protein 1768111..1768443 Muricauda ruestringensis DSM 13258 11054459 YP_004788096.1 CDS Murru_1634 NC_015945.1 1768585 1768989 D KEGG: rbi:RB2501_05175 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1768585..1768989 Muricauda ruestringensis DSM 13258 11054460 YP_004788097.1 CDS Murru_1635 NC_015945.1 1769192 1770745 R PFAM: Peptidase family M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: gfo:GFO_3448 M28 family peptidase; PFAM: Peptidase M28; SPTR: Peptidase, M28 family protein; peptidase M28 complement(1769192..1770745) Muricauda ruestringensis DSM 13258 11054461 YP_004788098.1 CDS Murru_1636 NC_015945.1 1771066 1771908 R PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: rbi:RB2501_05160 PAP2 family protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: PAP2 family protein; phosphoesterase PA-phosphatase-like protein complement(1771066..1771908) Muricauda ruestringensis DSM 13258 11054462 YP_004788099.1 CDS Murru_1637 NC_015945.1 1771939 1772841 R PFAM: Histone deacetylase domain; COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: gfo:GFO_3101 histone deacetylase family protein; PFAM: Histone deacetylase superfamily; PRIAM: Histone deacetylase; SPTR: Histone deacetylase superfamily protein; histone deacetylase complement(1771939..1772841) Muricauda ruestringensis DSM 13258 11054463 YP_004788100.1 CDS Murru_1638 NC_015945.1 1772843 1774975 R PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; COGs: COG2183 Transcriptional accessory protein; InterProIPR018974:IPR003029:IPR006641:IPR022967:IPR 004509; KEGG: fbc:FB2170_04335 putative RNA binding protein with S1 RNA-binding domain; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA-binding domain; SMART: Resolvase, RNase H-like fold; RNA-binding domain, S1; SPTR: Putative RNA binding protein with S1 RNA-binding domain; TIGRFAM: Competence protein ComEA, helix-hairpin-helix domain; competence protein ComEA complement(1772843..1774975) Muricauda ruestringensis DSM 13258 11054464 YP_004788101.1 CDS Murru_1639 NC_015945.1 1775108 1777204 R PFAM: Anticodon-binding domain; tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase; COGs: COG0143 Methionyl-tRNA synthetase; HAMAP: Methionyl-tRNA synthetase; InterPro IPR015413:IPR002547:IPR014758:IPR004495; KEGG: fbc:FB2170_04330 methionyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding domain; PRIAM: Methionine--tRNA ligase; SPTR: Methionyl-tRNA synthetase; TIGRFAM: Methionyl-tRNA synthetase, class Ia; Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal; methionyl-tRNA synthetase complement(1775108..1777204) Muricauda ruestringensis DSM 13258 11054465 YP_004788102.1 CDS Murru_1640 NC_015945.1 1777347 1779059 R PFAM: Protein of unknown function (DUF1501); COGs: COG4102 conserved hypothetical protein; InterPro IPR010869:IPR006311; KEGG: fbc:FB2170_04325 hypothetical protein; PFAM: Protein of unknown function DUF1501; SPTR: Putative uncharacterized protein; hypothetical protein complement(1777347..1779059) Muricauda ruestringensis DSM 13258 11054466 YP_004788103.1 CDS Murru_1641 NC_015945.1 1779070 1780581 R PFAM: Protein of unknown function (DUF1800); COGs: COG5267 conserved hypothetical protein; InterPro IPR014917; KEGG: rbi:RB2501_05140 putative signal peptide protein; PFAM: Protein of unknown function DUF1800; SPTR: Probable signal peptide protein; hypothetical protein complement(1779070..1780581) Muricauda ruestringensis DSM 13258 11054467 YP_004788104.1 CDS Murru_1642 NC_015945.1 1780748 1781107 D PFAM: Uncharacterised protein family UPF0102; COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; HAMAP: Uncharacterised protein family UPF0102; InterPro IPR003509; KEGG: fbc:FB2170_04315 hypothetical protein; PFAM: Uncharacterised protein family UPF0102; SPTR: UPF0102 protein FB2170_04315; hypothetical protein 1780748..1781107 Muricauda ruestringensis DSM 13258 11054468 YP_004788105.1 CDS Murru_1643 NC_015945.1 1781162 1781821 D KEGG: fbc:FB2170_04310 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1781162..1781821 Muricauda ruestringensis DSM 13258 11054469 YP_004788106.1 CDS Murru_1644 NC_015945.1 1781894 1783876 D PFAM: Protein of unknown function (DUF3352); KEGG: mtt:Ftrac_3005 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1781894..1783876 Muricauda ruestringensis DSM 13258 11054470 YP_004788107.1 CDS Murru_1645 NC_015945.1 1783979 1785190 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: fbc:FB2170_05440 hypothetical protein; PFAM: Beta-lactamase-related; SPTR: Putative uncharacterized protein; beta-lactamase 1783979..1785190 Muricauda ruestringensis DSM 13258 11054471 YP_004788108.1 CDS Murru_1646 NC_015945.1 1785221 1785988 D hypothetical protein 1785221..1785988 Muricauda ruestringensis DSM 13258 11054472 YP_004788109.1 CDS Murru_1647 NC_015945.1 1785965 1789423 R PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd); COGs: COG1197 Transcription-repair coupling factor (superfamily II helicase); InterProIPR003711:IPR011545:IPR001650:IPR005118:IPR 014001:IPR004576; KEGG: fbc:FB2170_04290 transcription-repair coupling factor; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Transcription factor CarD; Helicase, C-terminal; Transcription-repair-coupling factor domain; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: Transcription-repair coupling factor; TIGRFAM: Transcription-repair coupling factor; transcription-repair coupling factor complement(1785965..1789423) Muricauda ruestringensis DSM 13258 11054473 YP_004788110.1 CDS Murru_1648 NC_015945.1 1789688 1790320 R PFAM: Calcineurin-like phosphoesterase; TIGRFAM: putative phosphoesterase, SbcD/Mre11-related; COGs: COG1407 ICC-like phosphoesterase; InterPro IPR004843; KEGG: gfo:GFO_3152 phosphoesterase domain-containing protein; PFAM: Metallo-dependent phosphatase; SPTR: Metallophosphoesterase; metallophosphoesterase complement(1789688..1790320) Muricauda ruestringensis DSM 13258 11054474 YP_004788111.1 CDS Murru_1649 NC_015945.1 1790508 1792970 R PFAM: Helicase conserved C-terminal domain; DEAD/H associated; DEAD/DEAH box helicase; COGs: COG1201 Lhr-like helicase; InterPro IPR011545:IPR001650:IPR013701:IPR014001; KEGG: cat:CA2559_02265 helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; PFAM: DEAD/H associated; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal; manually curated; DEAD/DEAH box helicase complement(1790508..1792970) Muricauda ruestringensis DSM 13258 11054475 YP_004788112.1 CDS Murru_1650 NC_015945.1 1793069 1793497 D KEGG: rbi:RB2501_05090 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1793069..1793497 Muricauda ruestringensis DSM 13258 11054476 YP_004788113.1 CDS Murru_1651 NC_015945.1 1793494 1794501 R PFAM: Fructose-1-6-bisphosphatase; COGs: COG0158 Fructose-1 6-bisphosphatase; HAMAP: Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase; InterPro IPR000146; KEGG: fbc:FB2170_04280 fructose-1,6-bisphosphatase; PFAM: Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase; PRIAM: Fructose-bisphosphatase; SPTR: Fructose-1,6-bisphosphatase; fructose-1,6-bisphosphatase class 1 complement(1793494..1794501) Muricauda ruestringensis DSM 13258 11054477 YP_004788114.1 CDS Murru_1652 NC_015945.1 1794613 1795095 D PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: fbc:FB2170_04275 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: GCN5-related N-acetyltransferase; N-acetyltransferase GCN5 1794613..1795095 Muricauda ruestringensis DSM 13258 11054478 YP_004788115.1 CDS Murru_1653 NC_015945.1 1795124 1796374 D PFAM: Amino acid kinase family; TIGRFAM: aspartate kinase; COGs: COG0527 Aspartokinase; InterPro IPR001048:IPR001341; KEGG: fbc:FB2170_04270 aspartate kinase III; PFAM: Aspartate/glutamate/uridylate kinase; SPTR: Aspartokinase; TIGRFAM: Aspartate kinase domain; aspartate kinase 1795124..1796374 Muricauda ruestringensis DSM 13258 11054479 YP_004788116.1 CDS Murru_1654 NC_015945.1 1796453 1798273 D PFAM: Acyltransferase; COGs: COG3176 Putative hemolysin; InterPro IPR002123; KEGG: fbc:FB2170_04265 putative hemolysin; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Putative hemolysin; phospholipid/glycerol acyltransferase 1796453..1798273 Muricauda ruestringensis DSM 13258 11054480 YP_004788117.1 CDS Murru_1655 NC_015945.1 1798270 1798761 R PFAM: Acetyltransferase (GNAT) family; COGs: COG1247 Sortase and related acyltransferase; InterPro IPR000182; KEGG: fbc:FB2170_04260 phosphinothricin N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Phosphinothricin N-acetyltransferase; N-acetyltransferase GCN5 complement(1798270..1798761) Muricauda ruestringensis DSM 13258 11054481 YP_004788118.1 CDS Murru_1656 NC_015945.1 1798951 1799340 R KEGG: lby:Lbys_1638 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1798951..1799340) Muricauda ruestringensis DSM 13258 11054482 YP_004788119.1 CDS Murru_1657 NC_015945.1 1799391 1799777 R KEGG: fbc:FB2170_04240 glyoxalase; SPTR: Glyoxalase; glyoxalase complement(1799391..1799777) Muricauda ruestringensis DSM 13258 11054483 YP_004788120.1 CDS Murru_1658 NC_015945.1 1799767 1800231 R PFAM: Domain of unknown function (DU1801); InterPro IPR014922; KEGG: fbc:FB2170_04235 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: Putative uncharacterized protein; hypothetical protein complement(1799767..1800231) Muricauda ruestringensis DSM 13258 11054484 YP_004788121.1 CDS Murru_1659 NC_015945.1 1800292 1801224 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: fbc:FB2170_04230 putative dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; PRIAM: Phosphoglycerate dehydrogenase; SPTR: Predicted dehydrogenase; phosphoglycerate dehydrogenase complement(1800292..1801224) Muricauda ruestringensis DSM 13258 11054485 YP_004788122.1 CDS Murru_1660 NC_015945.1 1801244 1801609 R PFAM: Cupin domain; InterPro IPR013096; KEGG: fbc:FB2170_04225 hypothetical protein; PFAM: Cupin 2, conserved barrel; SPTR: Putative uncharacterized protein; cupin 2 barrel domain-containing protein complement(1801244..1801609) Muricauda ruestringensis DSM 13258 11054486 YP_004788123.1 CDS Murru_1661 NC_015945.1 1801623 1801988 R PFAM: SnoaL-like polyketide cyclase; InterPro IPR009959; KEGG: dsa:Desal_1939 protein of unknown function DUF1486; PFAM: Protein of unknown function DUF1486; SPTR: Putative uncharacterized protein; hypothetical protein complement(1801623..1801988) Muricauda ruestringensis DSM 13258 11054487 YP_004788124.1 CDS Murru_1662 NC_015945.1 1802014 1803366 R PFAM: MgtE intracellular N domain; CBS domain; Divalent cation transporter; TIGRFAM: Mg2+ transporter (mgtE); COGs: COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain); InterPro IPR006668:IPR000644:IPR006667:IPR006669; KEGG: fbc:FB2170_04220 magnesium transporter; PFAM: MgtE magnesium transporter, integral membrane; Magnesium transporter, MgtE intracellular domain; Cystathionine beta-synthase, core; SMART: Magnesium transporter, MgtE intracellular domain; Cystathionine beta-synthase, core; SPTR: Magnesium transporter; TIGRFAM: Divalent cation transporter; magnesium transporter complement(1802014..1803366) Muricauda ruestringensis DSM 13258 11054488 YP_004788125.1 CDS Murru_1663 NC_015945.1 1803353 1804225 R PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase; COGs: COG0030 Dimethyladenosine transferase (rRNA methylation); HAMAP: Ribosomal RNA adenine dimethylase; InterPro IPR001737:IPR020598:IPR011530; KEGG: fbc:FB2170_04215 dimethyladenosine transferase; PFAM: Ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase, N-terminal; SPTR: Dimethyladenosine transferase; TIGRFAM: Ribosomal RNA adenine dimethylase; ribosomal RNA small subunit methyltransferase A complement(1803353..1804225) Muricauda ruestringensis DSM 13258 11054489 YP_004788126.1 CDS Murru_1664 NC_015945.1 1804244 1804552 R PFAM: AIG2-like family; InterPro IPR009288; KEGG: fjo:Fjoh_4897 hypothetical protein; PFAM: AIG2-like; SPTR: Putative uncharacterized protein; AIG2 family protein complement(1804244..1804552) Muricauda ruestringensis DSM 13258 11054490 YP_004788127.1 CDS Murru_1665 NC_015945.1 1804556 1804873 R KEGG: fbc:FB2170_04210 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1804556..1804873) Muricauda ruestringensis DSM 13258 11054491 YP_004788128.1 CDS Murru_1666 NC_015945.1 1805025 1806782 R InterPro IPR001440:IPR019734; KEGG: fbc:FB2170_04205 tetratricopeptide repeat domain-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: Tetratricopeptide repeat domain protein; hypothetical protein complement(1805025..1806782) Muricauda ruestringensis DSM 13258 11054492 YP_004788129.1 CDS Murru_1667 NC_015945.1 1806887 1808158 R PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase; COGs: COG0172 Seryl-tRNA synthetase; InterPro IPR015866:IPR002314:IPR002317; KEGG: fbc:FB2170_04200 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synthetase, class IIa, N-terminal; PRIAM: Serine--tRNA ligase; SPTR: Seryl-tRNA synthetase; TIGRFAM: Seryl-tRNA synthetase, class IIa; seryl-tRNA synthetase complement(1806887..1808158) Muricauda ruestringensis DSM 13258 11054493 YP_004788130.1 CDS Murru_1668 NC_015945.1 1808209 1809525 R PFAM: Vitamin K-dependent gamma-carboxylase; InterPro IPR007782:IPR011020; KEGG: fbc:FB2170_04190 gamma-glutamyl carboxylase-like protein; PFAM: Vitamin K-dependent gamma-carboxylase; SMART: HTTM; SPTR: Gamma-glutamyl carboxylase-like protein; Vitamin K-dependent gamma-carboxylase complement(1808209..1809525) Muricauda ruestringensis DSM 13258 11054494 YP_004788131.1 CDS Murru_1669 NC_015945.1 1809526 1810455 R PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; COGs: COG0196 FAD synthase; InterPro IPR015864:IPR015865:IPR002606; KEGG: fbc:FB2170_04185 riboflavin kinase / FAD synthetase; PFAM: Riboflavin kinase; FAD synthetase; PRIAM: FAD synthetase., Riboflavin kinase; SMART: Riboflavin kinase; SPTR: Riboflavin kinase / FAD synthetase; TIGRFAM: Riboflavin kinase/FAD synthetase; riboflavin biosynthesis protein RibF complement(1809526..1810455) Muricauda ruestringensis DSM 13258 11054495 YP_004788132.1 CDS Murru_1670 NC_015945.1 1810513 1814307 D PFAM: Developmentally Regulated MAPK Interacting Protein; Proprotein convertase P-domain; InterPro IPR002884; KEGG: fbc:FB2170_04180 hypothetical protein; PFAM: Proprotein convertase, P; SPTR: Putative uncharacterized protein; Proprotein convertase P 1810513..1814307 Muricauda ruestringensis DSM 13258 11054496 YP_004788133.1 CDS Murru_1671 NC_015945.1 1814304 1814990 D KEGG: fbc:FB2170_04175 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1814304..1814990 Muricauda ruestringensis DSM 13258 11054497 YP_004788134.1 CDS Murru_1672 NC_015945.1 1814992 1815621 R PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; COGs: COG0193 Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; InterPro IPR001328; KEGG: fbc:FB2170_04170 peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; PRIAM: Aminoacyl-tRNA hydrolase; SPTR: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase complement(1814992..1815621) Muricauda ruestringensis DSM 13258 11054498 YP_004788135.1 CDS Murru_1673 NC_015945.1 1815709 1816362 R PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form; COGs: COG1825 Ribosomal protein L25 (general stress protein Ctc); HAMAP: Ribosomal protein L25, long-form; InterPro IPR020055:IPR001021; KEGG: fbc:FB2170_04165 putative ribosomal L25p family stress protein; PFAM: Ribosomal protein L25, short-form; SPTR: 50S ribosomal protein L25; TIGRFAM: Ribosomal protein L25, long-form; 50S ribosomal protein L25 complement(1815709..1816362) Muricauda ruestringensis DSM 13258 11054499 YP_004788136.1 CDS Murru_1674 NC_015945.1 1816469 1817410 R PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR000836:IPR005946; KEGG: fbc:FB2170_04160 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: Ribose-phosphate pyrophosphokinase; TIGRFAM: Phosphoribosyl pyrophosphokinase; ribose-phosphate pyrophosphokinase complement(1816469..1817410) Muricauda ruestringensis DSM 13258 11054500 YP_004788137.1 CDS Murru_1675 NC_015945.1 1817833 1818009 R hypothetical protein complement(1817833..1818009) Muricauda ruestringensis DSM 13258 11054502 YP_004788138.1 CDS Murru_1676 NC_015945.1 1818483 1819757 D PFAM: ATP cone domain; Ribonucleotide reductase, small chain; COGs: COG0208 Ribonucleotide reductase beta subunit; InterPro IPR005144:IPR000358; KEGG: srm:SRM_00153 ribonucleoside-diphosphate reductase beta subunit; PFAM: ATP-cone; Ribonucleotide reductase; SPTR: Ribonucleoside-diphosphate reductase, beta subunit 1; ATP-cone domain-containing protein 1818483..1819757 Muricauda ruestringensis DSM 13258 11054503 YP_004788139.1 CDS Murru_1677 NC_015945.1 1819761 1821551 D PFAM: Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, alpha chain; InterPro IPR013509:IPR000788:IPR013350; KEGG: hla:Hlac_2944 ribonucleotide-diphosphate reductase subunit alpha; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; PRIAM: Ribonucleoside-diphosphate reductase; SPTR: Ribonucleotide-diphosphate reductase alpha subunit; TIGRFAM: Ribonucleoside-diphosphate reductase alpha chain; ribonucleoside-diphosphate reductase subunit alpha 1819761..1821551 Muricauda ruestringensis DSM 13258 11054504 YP_004788140.1 CDS Murru_1678 NC_015945.1 1821638 1821811 R hypothetical protein complement(1821638..1821811) Muricauda ruestringensis DSM 13258 11054505 YP_004788141.1 CDS Murru_1679 NC_015945.1 1821869 1825210 D PFAM: Domain of unknown function DUF11; TIGRFAM: conserved repeat domain; InterPro IPR001434; KEGG: fjo:Fjoh_3971 hypothetical protein; PFAM: Domain of unknown function DUF11; SPTR: Conserved repeat domain protein; TIGRFAM: Domain of unknown function DUF11; hypothetical protein 1821869..1825210 Muricauda ruestringensis DSM 13258 11054506 YP_004788142.1 CDS Murru_1680 NC_015945.1 1825213 1826154 D PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: fjo:Fjoh_3972 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein 1825213..1826154 Muricauda ruestringensis DSM 13258 11054507 YP_004788143.1 CDS Murru_1681 NC_015945.1 1826258 1826839 D TIGRFAM: siroheme synthase, N-terminal domain; COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); InterPro IPR006367; KEGG: gfo:GFO_0329 siroheme synthase; SPTR: Siroheme synthase (Precorrin-2 oxidase); TIGRFAM: Sirohaem synthase, N-terminal; siroheme synthase 1826258..1826839 Muricauda ruestringensis DSM 13258 11054508 YP_004788144.1 CDS Murru_1682 NC_015945.1 1826961 1827713 R PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: dfe:Dfer_1279 two component transcriptional regulator, LytTR family; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Response regulator; LytTR family two component transcriptional regulator complement(1826961..1827713) Muricauda ruestringensis DSM 13258 11054509 YP_004788145.1 CDS Murru_1683 NC_015945.1 1827724 1829649 R PFAM: Histidine kinase; 7TM diverse intracellular signalling; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR010559:IPR003594; KEGG: fba:FIC_00181 sensor histidine kinase; PFAM: Signal transduction histidine kinase, internal region; ATPase-like, ATP-binding domain; SPTR: Possible sensor protein; putative signal transduction histidine kinase complement(1827724..1829649) Muricauda ruestringensis DSM 13258 11054510 YP_004788146.1 CDS Murru_1684 NC_015945.1 1830522 1831196 R hypothetical protein complement(1830522..1831196) Muricauda ruestringensis DSM 13258 11054511 YP_004788147.1 CDS Murru_1685 NC_015945.1 1831406 1831780 R hypothetical protein complement(1831406..1831780) Muricauda ruestringensis DSM 13258 11054512 YP_004788148.1 CDS Murru_1686 NC_015945.1 1832009 1833019 R KEGG: sus:Acid_4398 dienelactone hydrolase; SPTR: Dienelactone hydrolase; hypothetical protein complement(1832009..1833019) Muricauda ruestringensis DSM 13258 11054513 YP_004788149.1 CDS Murru_1687 NC_015945.1 1833038 1833988 R PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: rbi:RB2501_06875 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein complement(1833038..1833988) Muricauda ruestringensis DSM 13258 11054514 YP_004788150.1 CDS Murru_1688 NC_015945.1 1834000 1837440 R KEGG: fbc:FB2170_05945 putative hemagglutinin/hemolysin-like protein; SPTR: Putative hemagglutinin/hemolysin-related protein; hypothetical protein complement(1834000..1837440) Muricauda ruestringensis DSM 13258 11054515 YP_004788151.1 CDS Murru_1689 NC_015945.1 1837804 1839945 R PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR003367:IPR006665; KEGG: fps:FP1920 OmpA family outer membrane protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Thrombospondin, type 3-like repeat; SPTR: Probable outer membrane protein, OmpA family; OmpA/MotB domain-containing protein complement(1837804..1839945) Muricauda ruestringensis DSM 13258 11054516 YP_004788152.1 CDS Murru_1690 NC_015945.1 1840540 1840872 R PFAM: Domain of unknown function (DUF1508); COGs: COG3422 conserved hypothetical protein; InterPro IPR010879; KEGG: rbi:RB2501_10572 hypothetical protein; PFAM: Domain of unknown function DUF1508; SPTR: Putative uncharacterized protein; hypothetical protein complement(1840540..1840872) Muricauda ruestringensis DSM 13258 11054517 YP_004788153.1 CDS Murru_1691 NC_015945.1 1841056 1842255 R PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase; COGs: COG0014 Gamma-glutamyl phosphate reductase; InterPro IPR000965; KEGG: cat:CA2559_12653 hypothetical protein; PRIAM: Glutamate-5-semialdehyde dehydrogenase; SPTR: Gamma-glutamyl phosphate reductase; TIGRFAM: Gamma-glutamyl phosphate reductase GPR; manually curated; gamma-glutamyl phosphate reductase complement(1841056..1842255) Muricauda ruestringensis DSM 13258 11054518 YP_004788154.1 CDS Murru_1692 NC_015945.1 1842255 1843031 R PFAM: Amino acid kinase family; TIGRFAM: glutamate 5-kinase; COGs: COG0263 Glutamate 5-kinase; InterPro IPR001048; KEGG: rbi:RB2501_13504 gamma-glutamyl kinase; PFAM: Aspartate/glutamate/uridylate kinase; PRIAM: Glutamate 5-kinase; SPTR: Gamma-glutamyl kinase; glutamate 5-kinase complement(1842255..1843031) Muricauda ruestringensis DSM 13258 11054519 YP_004788155.1 CDS Murru_1693 NC_015945.1 1843035 1843841 R PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR004455:IPR000304; KEGG: zpr:ZPR_2279 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; PRIAM: Pyrroline-5-carboxylate reductase; SPTR: Pyrroline-5-carboxylate reductase; TIGRFAM: Pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase complement(1843035..1843841) Muricauda ruestringensis DSM 13258 11054520 YP_004788156.1 CDS Murru_1694 NC_015945.1 1843877 1844068 R KEGG: rbi:RB2501_03410 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1843877..1844068) Muricauda ruestringensis DSM 13258 11054521 YP_004788157.1 CDS Murru_1695 NC_015945.1 1844099 1844296 R PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; HAMAP: Ribosomal protein S21; InterPro IPR001911; KEGG: zpr:ZPR_1153 30S ribosomal protein S21; SPTR: Putative ribosomal protein S21; TIGRFAM: Ribosomal protein S21; 30S ribosomal protein S21 complement(1844099..1844296) Muricauda ruestringensis DSM 13258 11054522 YP_004788158.1 CDS Murru_1696 NC_015945.1 1844305 1844748 R InterPro IPR000182; KEGG: mtt:Ftrac_3253 gcn5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Putative uncharacterized protein; N-acetyltransferase GCN5 complement(1844305..1844748) Muricauda ruestringensis DSM 13258 11054523 YP_004788159.1 CDS Murru_1697 NC_015945.1 1845421 1846515 R PFAM: Protein of unknown function (DUF1624); KEGG: fbc:FB2170_12486 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1845421..1846515) Muricauda ruestringensis DSM 13258 11054524 YP_004788160.1 CDS Murru_1698 NC_015945.1 1846769 1847566 R PFAM: Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR000792; KEGG: gfo:GFO_3486 LuxR family transcriptional regulator protein; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; SPTR: LuxR family transcriptional regulator protein; LuxR family transcriptional regulator complement(1846769..1847566) Muricauda ruestringensis DSM 13258 11054525 YP_004788161.1 CDS Murru_1699 NC_015945.1 1847730 1849319 D KEGG: ssl:SS1G_10991 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1847730..1849319 Muricauda ruestringensis DSM 13258 11054526 YP_004788162.1 CDS Murru_1700 NC_015945.1 1849333 1850541 D PFAM: MORN repeat variant; InterPro IPR011652; KEGG: mtt:Ftrac_1184 MORN variant repeat-containing protein; PFAM: MORN variant; SPTR: Hypothetical exported 24-amino acid repeat protein; MORN repeat-containing protein 1849333..1850541 Muricauda ruestringensis DSM 13258 11054527 YP_004788163.1 CDS Murru_1701 NC_015945.1 1850675 1851598 R PFAM: Bacterial regulatory proteins, luxR family; PAS fold; TIGRFAM: PAS domain S-box; InterPro IPR013655:IPR000014; KEGG: cpi:Cpin_1033 TPR repeat-containing protein; PFAM: PAS fold-3; SMART: PAS; SPTR: Tetratricopeptide repeat domain protein; TIGRFAM: PAS; PAS sensor protein complement(1850675..1851598) Muricauda ruestringensis DSM 13258 11054528 YP_004788164.1 CDS Murru_1702 NC_015945.1 1852039 1853262 D hypothetical protein 1852039..1853262 Muricauda ruestringensis DSM 13258 11054529 YP_004788165.1 CDS Murru_1703 NC_015945.1 1853365 1854009 D hypothetical protein 1853365..1854009 Muricauda ruestringensis DSM 13258 11054530 YP_004788166.1 CDS Murru_1704 NC_015945.1 1854094 1855551 D PFAM: Amidohydrolase family; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR013108; KEGG: kko:Kkor_2183 amidohydrolase; PFAM: Amidohydrolase 3; SPTR: Amidohydrolase family protein; amidohydrolase 1854094..1855551 Muricauda ruestringensis DSM 13258 11054531 YP_004788167.1 CDS Murru_1705 NC_015945.1 1855614 1857422 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: phe:Phep_3062 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase 1855614..1857422 Muricauda ruestringensis DSM 13258 11054532 YP_004788168.1 CDS Murru_1706 NC_015945.1 1857578 1858606 D PFAM: Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; COGs: COG4927 choloylglycine hydrolase; InterPro IPR005079; KEGG: bcz:pE33L466_0332 choloylglycine hydrolase; PFAM: Peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; SPTR: Choloylglycine hydrolase; peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 1857578..1858606 Muricauda ruestringensis DSM 13258 11054533 YP_004788169.1 CDS Murru_1707 NC_015945.1 1858612 1859541 D PFAM: Polysaccharide deacetylase; InterPro IPR002509; KEGG: mtt:Ftrac_3433 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase domain protein; polysaccharide deacetylase 1858612..1859541 Muricauda ruestringensis DSM 13258 11054534 YP_004788170.1 CDS Murru_1708 NC_015945.1 1859604 1861307 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: gau:GAU_3453 beta-lactamase family protein; PFAM: Beta-lactamase-related; SPTR: Putative 6-aminohexanoate-dimer hydrolase; beta-lactamase 1859604..1861307 Muricauda ruestringensis DSM 13258 11054535 YP_004788171.1 CDS Murru_1709 NC_015945.1 1861344 1862045 D KEGG: gfo:GFO_3458 secreted protein; SPTR: Putative uncharacterized protein; hypothetical protein 1861344..1862045 Muricauda ruestringensis DSM 13258 11054536 YP_004788172.1 CDS Murru_1710 NC_015945.1 1862060 1863274 D PFAM: FG-GAP repeat; InterPro IPR013517; KEGG: rba:RB105 cysteine proteinase; PFAM: FG-GAP; SPTR: Probable cysteine proteinase; FG-GAP repeat-containing protein 1862060..1863274 Muricauda ruestringensis DSM 13258 11054537 YP_004788173.1 CDS Murru_1711 NC_015945.1 1863652 1866879 R PFAM: N-6 DNA Methylase; COGs: COG4889 helicase; KEGG: fba:FIC_01029 adenine specific DNA methyltransferase; SPTR: Adenine specific DNA methyltransferase; adenine specific DNA methyltransferase complement(1863652..1866879) Muricauda ruestringensis DSM 13258 11054538 YP_004788174.1 CDS Murru_1712 NC_015945.1 1867392 1868321 R PFAM: Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: fbc:FB2170_03940 hypothetical protein; PFAM: Domain of unknown function DUF58; SPTR: Putative uncharacterized protein; hypothetical protein complement(1867392..1868321) Muricauda ruestringensis DSM 13258 11054540 YP_004788175.1 CDS Murru_1713 NC_015945.1 1868533 1868850 R PFAM: Thioredoxin; TIGRFAM: thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766:IPR005746; KEGG: fbc:FB2170_03945 thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin; TIGRFAM: Thioredoxin; thioredoxin complement(1868533..1868850) Muricauda ruestringensis DSM 13258 11054541 YP_004788176.1 CDS Murru_1714 NC_015945.1 1868953 1873338 R PFAM: Bacterial DNA polymerase III alpha subunit; PHP domain; Exonuclease; TIGRFAM: DNA-directed DNA polymerase III (polc); COGs: COG0587 DNA polymerase III alpha subunit; InterProIPR013520:IPR004013:IPR011708:IPR004365:IPR 006055:IPR003141:IPR004805; KEGG: zpr:ZPR_4431 DNA polymerase III subunit alpha-1; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Exonuclease, RNase T/DNA polymerase III; Nucleic acid binding, OB-fold, tRNA/helicase-type; PRIAM: DNA-directed DNA polymerase; SMART: Polymerase/histidinol phosphatase, N-terminal; Exonuclease; SPTR: DNA polymerase III subunit alpha-1; TIGRFAM: DNA polymerase III, alpha subunit; DNA polymerase III subunit alpha complement(1868953..1873338) Muricauda ruestringensis DSM 13258 11054542 YP_004788177.1 CDS Murru_1715 NC_015945.1 1873484 1873939 R PFAM: Domain of unknown function (DUF2383); TIGRFAM: conserved hypothetical protein; InterPro IPR019052:IPR011971; KEGG: rbi:RB2501_04250 hypothetical protein; PFAM: Domain of unknown function DUF2383; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02284; hypothetical protein complement(1873484..1873939) Muricauda ruestringensis DSM 13258 11054543 YP_004788178.1 CDS Murru_1716 NC_015945.1 1874204 1874785 D PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; COGs: COG0228 Ribosomal protein S16; HAMAP: Ribosomal protein S16; InterPro IPR000307; KEGG: gfo:GFO_3030 30S ribosomal protein S16; PFAM: Ribosomal protein S16; SPTR: 30S ribosomal protein S16; TIGRFAM: Ribosomal protein S16; 30S ribosomal protein S16 1874204..1874785 Muricauda ruestringensis DSM 13258 11054544 YP_004788179.1 CDS Murru_1717 NC_015945.1 1874798 1875325 D PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM; COGs: COG0806 RimM protein required for 16S rRNA processing; HAMAP: 16S rRNA processing protein RimM; InterPro IPR007903:IPR011961; KEGG: fbc:FB2170_03965 16S rRNA-processing protein; PFAM: PRC-barrel; SPTR: Ribosome maturation factor rimM; TIGRFAM: 16S rRNA processing protein RimM; ribosome maturation factor rimM 1874798..1875325 Muricauda ruestringensis DSM 13258 11054545 YP_004788180.1 CDS Murru_1718 NC_015945.1 1875471 1875974 R KEGG: bfs:BF3160 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1875471..1875974) Muricauda ruestringensis DSM 13258 11054546 YP_004788181.1 CDS Murru_1719 NC_015945.1 1876141 1876875 D PFAM: Methyltransferase small domain; COGs: COG4123 O-methyltransferase; InterPro IPR007848; KEGG: fbc:FB2170_03980 hypothetical protein; PFAM: Methyltransferase small; SPTR: tRNA (adenine-N(6)-)-methyltransferase; methyltransferase small 1876141..1876875 Muricauda ruestringensis DSM 13258 11054547 YP_004788182.1 CDS Murru_1720 NC_015945.1 1877031 1878209 D PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: fbc:FB2170_04000 acyl-CoA dehydrogenase-like protein; PFAM: Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA oxidase/dehydrogenase, type 1; PRIAM: Glutaryl-CoA dehydrogenase; SPTR: Acyl-CoA dehydrogenase-like protein; glutaryl-CoA dehydrogenase 1877031..1878209 Muricauda ruestringensis DSM 13258 11054548 YP_004788183.1 CDS Murru_1721 NC_015945.1 1878223 1880523 R PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; TIGRFAM: oxidoreductase alpha (molybdopterin) subunit; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006656:IPR006657:IPR010046; KEGG: fbc:FB2170_04020 oxidoreductase alpha (molybdopterin) subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding domain; PRIAM: Nitrate reductase; SPTR: Oxidoreductase alpha (Molybdopterin) subunit; TIGRFAM: Oxidoreductase alpha (molybdopterin) subunit; oxidoreductase alpha (molybdopterin) subunit complement(1878223..1880523) Muricauda ruestringensis DSM 13258 11054549 YP_004788184.1 CDS Murru_1722 NC_015945.1 1880667 1881926 D PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; InterPro IPR001126; KEGG: fps:FP0389 UmuC protein; PFAM: DNA-repair protein, UmuC-like; PRIAM: DNA-directed DNA polymerase; SPTR: Nucleotidyltransferase/DNA polymerase involved in DNA repair; DNA-directed DNA polymerase 1880667..1881926 Muricauda ruestringensis DSM 13258 11054550 YP_004788185.1 CDS Murru_1723 NC_015945.1 1881923 1882372 D PFAM: Peptidase S24-like; COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase); InterPro IPR019759; KEGG: fjo:Fjoh_1967 putative prophage repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; SPTR: Putative UmuD/RumA DNA repair protein; peptidase S24/S26A/S26B 1881923..1882372 Muricauda ruestringensis DSM 13258 11054551 YP_004788186.1 CDS Murru_1724 NC_015945.1 1883169 1884140 R PFAM: Arginase family; TIGRFAM: formimidoylglutamase; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; HAMAP: Formiminoglutamase; InterPro IPR006035:IPR005923; KEGG: fbc:FB2170_03650 formiminoglutamase; PFAM: Ureohydrolase; PRIAM: Formimidoylglutamase; SPTR: Formimidoylglutamase; TIGRFAM: Formiminoglutamase; Formimidoylglutamase complement(1883169..1884140) Muricauda ruestringensis DSM 13258 11054552 YP_004788187.1 CDS Murru_1725 NC_015945.1 1884145 1886148 R PFAM: Urocanase; TIGRFAM: urocanate hydratase; COGs: COG2987 Urocanate hydratase; InterPro IPR000193; KEGG: fbc:FB2170_03630 urocanate hydratase; PFAM: Urocanase; PRIAM: Urocanate hydratase; SPTR: Urocanate hydratase; urocanate hydratase complement(1884145..1886148) Muricauda ruestringensis DSM 13258 11054553 YP_004788188.1 CDS Murru_1726 NC_015945.1 1886160 1887386 R PFAM: Amidohydrolase family; TIGRFAM: imidazolonepropionase; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680:IPR005920; KEGG: fbc:FB2170_03625 imidazolonepropionase; PFAM: Amidohydrolase 1; PRIAM: Imidazolonepropionase; SPTR: Imidazolonepropionase; TIGRFAM: Imidazolonepropionase; imidazolonepropionase complement(1886160..1887386) Muricauda ruestringensis DSM 13258 11054554 YP_004788189.1 CDS Murru_1727 NC_015945.1 1887388 1888965 R PFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; COGs: COG2986 Histidine ammonia-lyase; InterPro IPR001106:IPR005921; KEGG: fbc:FB2170_03620 histidine ammonia-lyase; PFAM: Phenylalanine/histidine ammonia-lyase; PRIAM: Histidine ammonia-lyase; SPTR: Histidine ammonia-lyase; TIGRFAM: Histidine ammonia-lyase; histidine ammonia-lyase complement(1887388..1888965) Muricauda ruestringensis DSM 13258 11054555 YP_004788190.1 CDS Murru_1728 NC_015945.1 1889040 1889927 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: fbc:FB2170_03615 als operon regulatory protein AlsR; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; SPTR: Als operon regulatory protein AlsR, putative; LysR family transcriptional regulator 1889040..1889927 Muricauda ruestringensis DSM 13258 11054556 YP_004788191.1 CDS Murru_1729 NC_015945.1 1890117 1890671 D PFAM: Nitroreductase family; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: rbi:RB2501_04095 hypothetical protein; PFAM: Nitroreductase-like; SPTR: Putative uncharacterized protein; nitroreductase 1890117..1890671 Muricauda ruestringensis DSM 13258 11054557 YP_004788192.1 CDS Murru_1730 NC_015945.1 1890668 1891180 R PFAM: Protein of unknown function (DUF456); COGs: COG2839 conserved hypothetical protein; InterPro IPR007403; KEGG: fbc:FB2170_03610 hypothetical protein; PFAM: Protein of unknown function DUF456; SPTR: Putative uncharacterized protein; hypothetical protein complement(1890668..1891180) Muricauda ruestringensis DSM 13258 11054558 YP_004788193.1 CDS Murru_1731 NC_015945.1 1891295 1891735 D SPTR: Putative uncharacterized protein; hypothetical protein 1891295..1891735 Muricauda ruestringensis DSM 13258 11054559 YP_004788194.1 CDS Murru_1732 NC_015945.1 1891910 1894135 D PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: cat:CA2559_04680 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor; TonB-dependent receptor 1891910..1894135 Muricauda ruestringensis DSM 13258 11054560 YP_004788195.1 CDS Murru_1733 NC_015945.1 1894446 1894808 D PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: fbc:FB2170_03605 putative antibiotic resistance-related regulatory protein; PFAM: Penicillinase repressor; SPTR: Putative antibiotic resistance-related regulatory protein; CopY family transcriptional repressor 1894446..1894808 Muricauda ruestringensis DSM 13258 11054561 YP_004788196.1 CDS Murru_1734 NC_015945.1 1894805 1896733 D PFAM: BlaR1 peptidase M56; Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR008756:IPR006260; KEGG: fbc:FB2170_03600 TonB; PFAM: Peptidase M56, BlaR1; TonB, C-terminal; SPTR: TonB; TIGRFAM: TonB, C-terminal; TonB family protein 1894805..1896733 Muricauda ruestringensis DSM 13258 11054562 YP_004788197.1 CDS Murru_1735 NC_015945.1 1896755 1897900 D InterPro IPR001440:IPR019734; KEGG: fbc:FB2170_03595 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: TPR repeat protein:HAT (Half-A-TPR) repeat; hypothetical protein 1896755..1897900 Muricauda ruestringensis DSM 13258 11054563 YP_004788198.1 CDS Murru_1736 NC_015945.1 1897945 1898424 D KEGG: fbc:FB2170_03585 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1897945..1898424 Muricauda ruestringensis DSM 13258 11054564 YP_004788199.1 CDS Murru_1737 NC_015945.1 1898426 1898977 D PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; COGs: COG0817 Holliday junction resolvasome endonuclease subunit; HAMAP: Crossover junction endodeoxyribonuclease RuvC; InterPro IPR002176; KEGG: fbc:FB2170_03580 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC; PRIAM: Crossover junction endodeoxyribonuclease; SPTR: Crossover junction endodeoxyribonuclease ruvC; TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; Crossover junction endodeoxyribonuclease ruvC 1898426..1898977 Muricauda ruestringensis DSM 13258 11054565 YP_004788200.1 CDS Murru_1738 NC_015945.1 1899075 1900223 D PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR007197:IPR010723:IPR006638:IPR004559; KEGG: fjo:Fjoh_1376 putative oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Coproporphyrinogen III oxidase; TIGRFAM: Putative oxygen-independent coproporphyrinogen III oxidase; oxygen-independent coproporphyrinogen III oxidase 1899075..1900223 Muricauda ruestringensis DSM 13258 11054566 YP_004788201.1 CDS Murru_1739 NC_015945.1 1900307 1901059 D PFAM: Putative cyclase; KEGG: fbc:FB2170_03570 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1900307..1901059 Muricauda ruestringensis DSM 13258 11054567 YP_004788202.1 CDS Murru_1740 NC_015945.1 1901060 1901419 D KEGG: fbc:FB2170_03560 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1901060..1901419 Muricauda ruestringensis DSM 13258 11054568 YP_004788203.1 CDS Murru_1741 NC_015945.1 1901412 1902035 D KEGG: fbc:FB2170_03555 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1901412..1902035 Muricauda ruestringensis DSM 13258 11054569 YP_004788204.1 CDS Murru_1742 NC_015945.1 1902038 1902439 D PFAM: Stress responsive A/B Barrel Domain; InterPro IPR013097; KEGG: rbi:RB2501_04055 hypothetical protein; PFAM: Stress responsive alpha-beta barrel; SMART: Stress responsive alpha-beta barrel; SPTR: Putative uncharacterized protein; stress responsive alpha-beta barrel domain-containing protein 1902038..1902439 Muricauda ruestringensis DSM 13258 11054570 YP_004788205.1 CDS Murru_1743 NC_015945.1 1902436 1902795 D PFAM: Protein of unknown function (DUF419); COGs: COG2315 conserved hypothetical protein; InterPro IPR007351; KEGG: fbc:FB2170_03545 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1902436..1902795 Muricauda ruestringensis DSM 13258 11054571 YP_004788206.1 CDS Murru_1744 NC_015945.1 1902803 1904572 D PFAM: MutS domain V; COGs: COG0249 Mismatch repair ATPase (MutS family); InterPro IPR000432; KEGG: fbc:FB2170_03535 DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS, C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal; SPTR: DNA mismatch repair protein mutS; DNA mismatch repair protein MutS domain-containing protein 1902803..1904572 Muricauda ruestringensis DSM 13258 11054572 YP_004788207.1 CDS Murru_1745 NC_015945.1 1904569 1905669 R KEGG: fbc:FB2170_03455 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1904569..1905669) Muricauda ruestringensis DSM 13258 11054573 YP_004788208.1 CDS Murru_1746 NC_015945.1 1905773 1907815 R PFAM: BlaR1 peptidase M56; COGs: COG4219 Antirepressor regulating drug resistance predicted signal transduction N-terminal membrane component; InterPro IPR008756; KEGG: fbc:FB2170_03450 TonB; PFAM: Peptidase M56, BlaR1; SPTR: TonB; peptidase M56 BlaR1 complement(1905773..1907815) Muricauda ruestringensis DSM 13258 11054574 YP_004788209.1 CDS Murru_1747 NC_015945.1 1907818 1908183 R PFAM: Penicillinase repressor; COGs: COG3682 transcriptional regulator protein; InterPro IPR005650; KEGG: fbc:FB2170_03445 putative antibiotic resistance-related regulatory protein; PFAM: Penicillinase repressor; SPTR: Putative antibiotic resistance-related regulatory protein; CopY family transcriptional repressor complement(1907818..1908183) Muricauda ruestringensis DSM 13258 11054575 YP_004788210.1 CDS Murru_1748 NC_015945.1 1908290 1908898 D PFAM: PhnA protein; TIGRFAM: alkylphosphonate utilization operon protein PhnA; COGs: COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism; InterPro IPR013987:IPR013988:IPR013991; KEGG: fbc:FB2170_03440 phosphonate metabolism Zn-ribbon-containing protein; PFAM: PhnA protein, C-terminal; PhnA protein, N-terminal; SMART: PhnA protein N-terminal, proteobacterial; SPTR: Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism; PhnA protein 1908290..1908898 Muricauda ruestringensis DSM 13258 11054576 YP_004788211.1 CDS Murru_1749 NC_015945.1 1908895 1910283 R PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650; KEGG: fbc:FB2170_03435 putative succinyl-diaminopimelate desuccinylase; PFAM: Peptidase M20; Peptidase M20, dimerisation; PRIAM: Beta-Ala-His dipeptidase; SPTR: Putative succinyl-diaminopimelate desuccinylase; beta-Ala-His dipeptidase complement(1908895..1910283) Muricauda ruestringensis DSM 13258 11054577 YP_004788212.1 CDS Murru_1750 NC_015945.1 1910780 1911934 R KEGG: ppn:Palpr_1952 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1910780..1911934) Muricauda ruestringensis DSM 13258 11054579 YP_004788213.1 CDS Murru_1751 NC_015945.1 1912061 1913062 D KEGG: fjo:Fjoh_4751 transcriptional regulator-like protein; SPTR: Putative uncharacterized protein; hypothetical protein 1912061..1913062 Muricauda ruestringensis DSM 13258 11054580 YP_004788214.1 CDS Murru_1752 NC_015945.1 1913119 1915620 D PFAM: N-6 DNA Methylase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Type I restriction modification DNA specificity domain; COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356:IPR003594; KEGG: rbi:RB2501_07120 type I restriction-modification system, M subunit; PFAM: DNA methylase, adenine-specific; ATPase-like, ATP-binding domain; SPTR: Putative DNA restriction-modification system, DNA methylase; N-6 DNA methylase 1913119..1915620 Muricauda ruestringensis DSM 13258 11054581 YP_004788215.1 CDS Murru_1753 NC_015945.1 1915623 1916801 D KEGG: rbi:RB2501_07115 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1915623..1916801 Muricauda ruestringensis DSM 13258 11054582 YP_004788216.1 CDS Murru_1754 NC_015945.1 1916866 1918146 D PFAM: Uncharacterized protein conserved in bacteria (DUF2130); COGs: COG4487 conserved hypothetical protein; InterPro IPR019219; KEGG: llo:LLO_2961 coiled-coil protein; PFAM: Protein of unknown function DUF2130; SPTR: Putative uncharacterized protein; hypothetical protein 1916866..1918146 Muricauda ruestringensis DSM 13258 11054583 YP_004788217.1 CDS Murru_1755 NC_015945.1 1918150 1919787 D PFAM: N-6 DNA Methylase; HsdM N-terminal domain; COGs: COG0286 Type I restriction-modification system methyltransferase subunit; InterPro IPR003356; KEGG: gur:Gura_2095 N-6 DNA methylase; PFAM: DNA methylase, adenine-specific; SPTR: Type I restriction modification system M subunit (Site-specific DNA-methyltransferase subunit); N-6 DNA methylase 1918150..1919787 Muricauda ruestringensis DSM 13258 11054584 YP_004788218.1 CDS Murru_1756 NC_015945.1 1919789 1920949 D PFAM: Type I restriction modification DNA specificity domain; COGs: COG0732 Restriction endonuclease S subunits; InterPro IPR000055; KEGG: spx:SPG_0813 type I restriction-modification system subunit S; PFAM: Restriction endonuclease, type I, S subunit, EcoBI; SPTR: Restriction modification system DNA specificity domain; restriction modification system DNA specificity domain-containing protein 1919789..1920949 Muricauda ruestringensis DSM 13258 11054585 YP_004788219.1 CDS Murru_1757 NC_015945.1 1921087 1922319 D PFAM: 'Cold-shock' DNA-binding domain; InterPro IPR002059:IPR011129; KEGG: cyp:PCC8801_1879 hypothetical protein; PFAM: Cold-shock protein, DNA-binding; SPTR: Putative uncharacterized protein; DNA-binding cold-shock protein 1921087..1922319 Muricauda ruestringensis DSM 13258 11054586 YP_004788220.1 CDS Murru_1758 NC_015945.1 1922335 1922892 D PFAM: Protein of unknown function (DUF1643); InterPro IPR012441; KEGG: mtt:Ftrac_0456 hypothetical protein; PFAM: Protein of unknown function DUF1643; SPTR: Putative uncharacterized protein; hypothetical protein 1922335..1922892 Muricauda ruestringensis DSM 13258 11054587 YP_004788221.1 CDS Murru_1759 NC_015945.1 1922906 1926391 D PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Helicase conserved C-terminal domain; Domain of unknown function (DUF3559); Type III restriction enzyme, res subunit; COGs: COG4096 Type I site-specific restriction-modification system R (restriction) subunit and related helicase; InterPro IPR007409:IPR006935:IPR001650:IPR014001; KEGG: mtt:Ftrac_1394 type I site-specific deoxyribonuclease; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Helicase, C-terminal; PRIAM: Type I site-specific deoxyribonuclease; SMART: DEAD-like helicase, N-terminal; SPTR: Type I restriction enzyme, R protein; Type I site-specific deoxyribonuclease 1922906..1926391 Muricauda ruestringensis DSM 13258 11054588 YP_004788222.1 CDS Murru_1760 NC_015945.1 1926466 1928223 D KEGG: she:Shewmr4_1714 hypothetical protein; hypothetical protein 1926466..1928223 Muricauda ruestringensis DSM 13258 11054589 YP_004788223.1 CDS Murru_1761 NC_015945.1 1928799 1929146 R hypothetical protein complement(1928799..1929146) Muricauda ruestringensis DSM 13258 11054590 YP_004788224.1 CDS Murru_1762 NC_015945.1 1929177 1929524 R KEGG: zpr:ZPR_2787 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1929177..1929524) Muricauda ruestringensis DSM 13258 11054591 YP_004788225.1 CDS Murru_1763 NC_015945.1 1929535 1930740 R PFAM: HEPN domain; KEGG: zpr:ZPR_1524 nucleotidyltransferase substrate binding subunit; SPTR: Nucleotidyltransferase substrate binding subunit; hypothetical protein complement(1929535..1930740) Muricauda ruestringensis DSM 13258 11054592 YP_004788226.1 CDS Murru_1764 NC_015945.1 1930885 1931286 D PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: gfo:GFO_0674 HTH_3 family transcriptional regulator protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: HTH_3 family transcriptional regulator protein; helix-turn-helix domain-containing protein 1930885..1931286 Muricauda ruestringensis DSM 13258 11054593 YP_004788227.1 CDS Murru_1765 NC_015945.1 1931395 1931577 D hypothetical protein 1931395..1931577 Muricauda ruestringensis DSM 13258 11054594 YP_004788228.1 CDS Murru_1766 NC_015945.1 1931574 1932050 D PFAM: Domain of unknown function (DUF1814); KEGG: dol:Dole_1128 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1931574..1932050 Muricauda ruestringensis DSM 13258 11054595 YP_004788229.1 CDS Murru_1767 NC_015945.1 1932521 1933474 D KEGG: vco:VC0395_0845 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1932521..1933474 Muricauda ruestringensis DSM 13258 11054596 YP_004788230.1 CDS Murru_1768 NC_015945.1 1933705 1934919 R PFAM: Phage integrase family; InterPro IPR002104; KEGG: zpr:ZPR_3365 tyrosine type site-specific recombinase; PFAM: Integrase, catalytic core, phage; SPTR: Tyrosine type site-specific recombinase; integrase family protein complement(1933705..1934919) Muricauda ruestringensis DSM 13258 11054597 YP_004788231.1 CDS Murru_1769 NC_015945.1 1935214 1935420 R hypothetical protein complement(1935214..1935420) Muricauda ruestringensis DSM 13258 11054598 YP_004788232.1 CDS Murru_1770 NC_015945.1 1935984 1936373 D PFAM: Response regulator receiver domain; InterPro IPR001789; KEGG: rbi:RB2501_13034 hypothetical protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Putative uncharacterized protein; response regulator receiver 1935984..1936373 Muricauda ruestringensis DSM 13258 11054599 YP_004788233.1 CDS Murru_1771 NC_015945.1 1936459 1937916 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR013655:IPR003594:IPR001610:IPR000014; KEGG: rbi:RB2501_07205 histidine kinase sensor protein; PFAM: ATPase-like, ATP-binding domain; PAS fold-3; SMART: ATPase-like, ATP-binding domain; PAC motif; SPTR: Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS; PAS/PAC sensor signal transduction histidine kinase 1936459..1937916 Muricauda ruestringensis DSM 13258 11054600 YP_004788234.1 CDS Murru_1772 NC_015945.1 1937921 1938856 R PFAM: Pyridoxal-phosphate dependent enzyme; COGs: COG1171 Threonine dehydratase; InterPro IPR001926; KEGG: zpr:ZPR_3642 serine racemase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Serine racemase; SPTR: Serine racemase; serine racemase complement(1937921..1938856) Muricauda ruestringensis DSM 13258 11054601 YP_004788235.1 CDS Murru_1773 NC_015945.1 1938917 1939825 R PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: fbc:FB2170_03675 putative universal stress protein UspA; PFAM: UspA; SPTR: Putative universal stress protein UspA; UspA domain-containing protein complement(1938917..1939825) Muricauda ruestringensis DSM 13258 11054602 YP_004788236.1 CDS Murru_1774 NC_015945.1 1939907 1940596 R PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595:IPR001808; KEGG: fbc:FB2170_03680 transcriptional regulator; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SPTR: Transcriptional regulatory protein; Crp/Fnr family transcriptional regulator complement(1939907..1940596) Muricauda ruestringensis DSM 13258 11054603 YP_004788237.1 CDS Murru_1775 NC_015945.1 1940716 1943100 D PFAM: E1-E2 ATPase; Putative metal-binding domain of cation transport ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2217 Cation transport ATPase; InterPro IPR008250:IPR005834:IPR006416:IPR001757; KEGG: fbc:FB2170_03685 cation transport ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; PRIAM: Copper-exporting ATPase; SPTR: Cation transport ATPase, E1-E2 family protein; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; heavy metal translocating P-type ATPase 1940716..1943100 Muricauda ruestringensis DSM 13258 11054604 YP_004788238.1 CDS Murru_1776 NC_015945.1 1943160 1943369 D PFAM: Cytochrome oxidase maturation protein cbb3-type; TIGRFAM: cytochrome oxidase maturation protein, cbb3-type; InterPro IPR004714; KEGG: gfo:GFO_1432 cbb3-type cytochrome oxidase maturation protein; PFAM: Cytochrome oxidase maturation protein cbb3-type; SPTR: Cbb3-type cytochrome oxidase maturation protein; TIGRFAM: Cytochrome oxidase maturation protein cbb3-type; cbb3-type cytochrome oxidase maturation protein 1943160..1943369 Muricauda ruestringensis DSM 13258 11054605 YP_004788239.1 CDS Murru_1777 NC_015945.1 1943372 1945555 D PFAM: Cytochrome C oxidase, mono-heme subunit/FixO; Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; cytochrome c oxidase, cbb3-type, subunit I; COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883:IPR003468:IPR004677; KEGG: rbi:RB2501_04155 putative bifunctional cbb3-type cytochrome c oxidase subunit I/II; PFAM: Cytochrome c oxidase, monohaem subunit/FixO; Cytochrome c oxidase, subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Probable cytochrome oxidase subunit (Cbb3-type); TIGRFAM: Cytochrome c oxidase cbb3-type, subunit I; Cytochrome c oxidase, monohaem subunit/FixO; cytochrome c oxidase, cbb3-type subunit I 1943372..1945555 Muricauda ruestringensis DSM 13258 11054606 YP_004788240.1 CDS Murru_1778 NC_015945.1 1945639 1945827 D PFAM: Cbb3-type cytochrome oxidase component FixQ; KEGG: rbi:RB2501_04160 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1945639..1945827 Muricauda ruestringensis DSM 13258 11054607 YP_004788241.1 CDS Murru_1779 NC_015945.1 1945832 1946725 D PFAM: Cytochrome c; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit III; COGs: COG2010 Cytochrome c mono- and diheme variants; InterPro IPR003088; KEGG: fbc:FB2170_03705 cytochrome-c oxidase FixP chain; PFAM: Cytochrome c, class I; SPTR: Cytochrome-c oxidase fixP chain; cytochrome c class I 1945832..1946725 Muricauda ruestringensis DSM 13258 11054608 YP_004788242.1 CDS Murru_1780 NC_015945.1 1946855 1948264 D PFAM: Ubp3 associated protein Bre5; TIGRFAM: cytochrome c oxidase accessory protein FixG; COGs: COG0348 Polyferredoxin; InterPro IPR014116; KEGG: fbc:FB2170_03710 putative iron-sulfur protein; SPTR: Probable iron-sulfur protein; TIGRFAM: Cytochrome c oxidase cbb3 type, accessory protein FixG; cytochrome c oxidase accessory protein CcoG 1946855..1948264 Muricauda ruestringensis DSM 13258 11054609 YP_004788243.1 CDS Murru_1781 NC_015945.1 1948276 1948722 D PFAM: FixH; KEGG: fbc:FB2170_03715 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1948276..1948722 Muricauda ruestringensis DSM 13258 11054610 YP_004788244.1 CDS Murru_1782 NC_015945.1 1948725 1949435 D COGs: COG2836 conserved hypothetical protein; KEGG: fbc:FB2170_03720 integral membrane protein; SPTR: Integral membrane protein; integral membrane protein 1948725..1949435 Muricauda ruestringensis DSM 13258 11054611 YP_004788245.1 CDS Murru_1783 NC_015945.1 1949450 1950718 D PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR003702; KEGG: mtt:Ftrac_2521 acetyl-CoA hydrolase/transferase; PFAM: Acetyl-CoA hydrolase/transferase; SPTR: 4-Hydroxybutyrate CoA-transferase; acetyl-CoA hydrolase/transferase 1949450..1950718 Muricauda ruestringensis DSM 13258 11054612 YP_004788246.1 CDS Murru_1784 NC_015945.1 1950813 1951637 R PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: fbc:FB2170_03830 universal stress protein; PFAM: UspA; SPTR: Universal stress protein; UspA domain-containing protein complement(1950813..1951637) Muricauda ruestringensis DSM 13258 11054613 YP_004788247.1 CDS Murru_1785 NC_015945.1 1951655 1953028 R PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR007197:IPR010723:IPR006638:IPR004558; KEGG: fbc:FB2170_03835 coproporphyrinogen III oxidase; PFAM: HemN, C-terminal; Radical SAM; PRIAM: Coproporphyrinogen dehydrogenase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Coproporphyrinogen III oxidase; TIGRFAM: Oxygen-independent coproporphyrinogen III oxidase HemN; oxygen-independent coproporphyrinogen III oxidase complement(1951655..1953028) Muricauda ruestringensis DSM 13258 11054614 YP_004788248.1 CDS Murru_1786 NC_015945.1 1953199 1955043 D PFAM: CBS domain; COGs: COG2524 transcriptional regulator protein; InterPro IPR000644; KEGG: rbi:RB2501_06960 CBS domain pair protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain pair protein; putative signal transduction protein 1953199..1955043 Muricauda ruestringensis DSM 13258 11054615 YP_004788249.1 CDS Murru_1787 NC_015945.1 1955046 1956248 D PFAM: Succinylglutamate desuccinylase / Aspartoacylase family; TIGRFAM: succinylglutamate desuccinylase; InterPro IPR007036; KEGG: fbc:FB2170_06110 hypothetical protein; PFAM: Succinylglutamate desuccinylase/aspartoacylase; SPTR: Putative uncharacterized protein; succinylglutamate desuccinylase 1955046..1956248 Muricauda ruestringensis DSM 13258 11054616 YP_004788250.1 CDS Murru_1788 NC_015945.1 1956301 1957029 R PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR006260; KEGG: fbc:FB2170_08094 TonB; PFAM: TonB, C-terminal; SPTR: TonB; TIGRFAM: TonB, C-terminal; TonB family protein complement(1956301..1957029) Muricauda ruestringensis DSM 13258 11054617 YP_004788251.1 CDS Murru_1789 NC_015945.1 1957248 1958216 R PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase); COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: fbc:FB2170_07529 putative ROK family transcriptional repressor; PFAM: ROK; PRIAM: Glucokinase; SPTR: Putative ROK family transcriptional repressor; glucokinase complement(1957248..1958216) Muricauda ruestringensis DSM 13258 11054618 YP_004788252.1 CDS Murru_1790 NC_015945.1 1958413 1959204 D PFAM: Universal stress protein family; InterPro IPR006016; KEGG: rbi:RB2501_02930 hypothetical protein; PFAM: UspA; SPTR: Putative uncharacterized protein; UspA domain-containing protein 1958413..1959204 Muricauda ruestringensis DSM 13258 11054619 YP_004788253.1 CDS Murru_1791 NC_015945.1 1959284 1960603 D PFAM: Phosphofructokinase; COGs: COG0205 6-phosphofructokinase; InterPro IPR000023; KEGG: rbi:RB2501_13019 diphosphate--fructose-6-phosphate 1-phosphotransferase; PFAM: Phosphofructokinase domain; PRIAM: 6-phosphofructokinase; SPTR: Diphosphate--fructose-6-phosphate 1-phosphotransferase; 6-phosphofructokinase 1959284..1960603 Muricauda ruestringensis DSM 13258 11054620 YP_004788254.1 CDS Murru_1792 NC_015945.1 1960683 1960982 D PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; KEGG: fbc:FB2170_14558 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1960683..1960982 Muricauda ruestringensis DSM 13258 11054621 YP_004788255.1 CDS Murru_1793 NC_015945.1 1961031 1961657 D KEGG: fbc:FB2170_14428 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1961031..1961657 Muricauda ruestringensis DSM 13258 11054622 YP_004788256.1 CDS Murru_1794 NC_015945.1 1961654 1961803 R hypothetical protein complement(1961654..1961803) Muricauda ruestringensis DSM 13258 11054623 YP_004788257.1 CDS Murru_1795 NC_015945.1 1961909 1963300 R PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family; InterPro IPR005828:IPR003663; KEGG: fbc:FB2170_03315 xylose transporter; PFAM: General substrate transporter; SPTR: Xylose transporter; TIGRFAM: Sugar/inositol transporter; sugar transporter complement(1961909..1963300) Muricauda ruestringensis DSM 13258 11054624 YP_004788258.1 CDS Murru_1796 NC_015945.1 1963335 1964576 R PFAM: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); COGs: COG1519 3-deoxy-D-manno-octulosonic-acid transferase; InterPro IPR007507; KEGG: fbc:FB2170_03305 3-deoxy-D-manno-octulosonic-acid transferase; PFAM: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; SPTR: 3-deoxy-D-manno-octulosonic-acid transferase; three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein complement(1963335..1964576) Muricauda ruestringensis DSM 13258 11054625 YP_004788259.1 CDS Murru_1797 NC_015945.1 1964675 1965814 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: fbc:FB2170_03300 pigmentation and extracellular proteinase regulator; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: Pigmentation and extracellular proteinase regulator; DegT/DnrJ/EryC1/StrS aminotransferase 1964675..1965814 Muricauda ruestringensis DSM 13258 11054626 YP_004788260.1 CDS Murru_1798 NC_015945.1 1965818 1966834 D PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase; COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR001509:IPR005886; KEGG: fbc:FB2170_03295 putative UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: UDP-glucose 4-epimerase; SPTR: Putative UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 1965818..1966834 Muricauda ruestringensis DSM 13258 11054627 YP_004788261.1 CDS Murru_1799 NC_015945.1 1966877 1967233 D KEGG: fbc:FB2170_03285 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1966877..1967233 Muricauda ruestringensis DSM 13258 11054628 YP_004788262.1 CDS Murru_1800 NC_015945.1 1967241 1968368 R PFAM: Protein of unknown function (DUF1624); COGs: COG4299 conserved hypothetical protein; KEGG: cpi:Cpin_1463 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1967241..1968368) Muricauda ruestringensis DSM 13258 11054629 YP_004788263.1 CDS Murru_1801 NC_015945.1 1968551 1971349 D PFAM: Dehydrogenase E1 component; Transketolase, pyrimidine binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; COGs: COG0567 2-oxoglutarate dehydrogenase complex dehydrogenase (E1); InterPro IPR001017:IPR005475:IPR011603; KEGG: fbc:FB2170_03275 2-oxoglutarate dehydrogenase, E1 component; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; PRIAM: Oxoglutarate dehydrogenase (succinyl-transferring); SMART: Transketolase-like, pyrimidine-binding domain; SPTR: 2-oxoglutarate dehydrogenase, E1 component; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; 2-oxoglutarate dehydrogenase, E1 subunit 1968551..1971349 Muricauda ruestringensis DSM 13258 11054630 YP_004788264.1 CDS Murru_1802 NC_015945.1 1971373 1972593 D PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; TIGRFAM: 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component); COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089:IPR004167:IPR001078:IPR006255; KEGG: rbi:RB2501_03900 dihydrolipoamide succinyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; PRIAM: Dihydrolipoyllysine-residue succinyltransferase; SPTR: 2-oxoglutarate dehydrogenase complex,dihydrolipoamidesuccinyltransferase; TIGRFAM: Dihydrolipoamide succinyltransferase; 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase 1971373..1972593 Muricauda ruestringensis DSM 13258 11054631 YP_004788265.1 CDS Murru_1803 NC_015945.1 1972667 1973107 R PFAM: Retroviral aspartyl protease; KEGG: fbc:FB2170_03265 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1972667..1973107) Muricauda ruestringensis DSM 13258 11054632 YP_004788266.1 CDS Murru_1804 NC_015945.1 1973233 1974000 D PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; COGs: COG0084 Mg-dependent DNase; InterPro IPR001130:IPR015991; KEGG: fbc:FB2170_03260 putative Mg-dependent DNase; PFAM: Deoxyribonuclease, TatD-related; SPTR: Putative Mg-dependent DNase; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; TatD family hydrolase 1973233..1974000 Muricauda ruestringensis DSM 13258 11054633 YP_004788267.1 CDS Murru_1805 NC_015945.1 1974004 1975035 D PFAM: Asparaginase; TIGRFAM: L-asparaginases, type I; COGs: COG0252 L-asparaginase/ Glu-tRNAGln amidotransferase subunit D; InterPro IPR006034:IPR006033; KEGG: fbc:FB2170_03255 L-asparaginase I; PFAM: Asparaginase/glutaminase; PRIAM: 1-alkyl-2-acetylglycerophosphocholine esterase; SMART: Asparaginase/glutaminase; SPTR: L-asparaginase I; TIGRFAM: L-asparaginase, type I; type I L-asparaginase 1974004..1975035 Muricauda ruestringensis DSM 13258 11054634 YP_004788268.1 CDS Murru_1806 NC_015945.1 1975268 1975996 D PFAM: MotA/TolQ/ExbB proton channel family; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: fbc:FB2170_03250 putative biopolymer transport protein; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Putative biopolymer transport protein; MotA/TolQ/ExbB proton channel 1975268..1975996 Muricauda ruestringensis DSM 13258 11054636 YP_004788269.1 CDS Murru_1807 NC_015945.1 1976023 1976460 D KEGG: fbc:FB2170_03245 hypothetical protein; SPTR: Membrane protein; hypothetical protein 1976023..1976460 Muricauda ruestringensis DSM 13258 11054637 YP_004788270.1 CDS Murru_1808 NC_015945.1 1976474 1977079 D PFAM: Biopolymer transport protein ExbD/TolR; InterPro IPR003400; KEGG: fbc:FB2170_03240 hypothetical protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative uncharacterized protein; biopolymer transport protein ExbD/TolR 1976474..1977079 Muricauda ruestringensis DSM 13258 11054638 YP_004788271.1 CDS Murru_1809 NC_015945.1 1977092 1977574 D PFAM: Biopolymer transport protein ExbD/TolR; InterPro IPR003400; KEGG: rbi:RB2501_03865 hypothetical protein; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Putative uncharacterized protein; biopolymer transport protein ExbD/TolR 1977092..1977574 Muricauda ruestringensis DSM 13258 11054639 YP_004788272.1 CDS Murru_1810 NC_015945.1 1977647 1978348 D KEGG: fbc:FB2170_03230 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1977647..1978348 Muricauda ruestringensis DSM 13258 11054640 YP_004788273.1 CDS Murru_1811 NC_015945.1 1978343 1978945 R KEGG: fbc:FB2170_03225 putative transmembrane protein; SPTR: Putative transmembrane protein; hypothetical protein complement(1978343..1978945) Muricauda ruestringensis DSM 13258 11054641 YP_004788274.1 CDS Murru_1812 NC_015945.1 1978945 1980402 R PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54 factor, core binding domain; Sigma-54, DNA binding domain; TIGRFAM: RNA polymerase sigma-54 factor; COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR007046:IPR007634:IPR000394; KEGG: rbi:RB2501_03850 RNA polymerase sigma-54; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; SPTR: RNA polymerase sigma-54; TIGRFAM: RNA polymerase sigma factor 54; RNA polymerase sigma-54 subunit RpoN complement(1978945..1980402) Muricauda ruestringensis DSM 13258 11054642 YP_004788275.1 CDS Murru_1813 NC_015945.1 1980452 1981885 R PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: asparaginyl-tRNA synthetase; COGs: COG0017 Aspartyl/asparaginyl-tRNA synthetase; HAMAP: Asparaginyl-tRNA synthetase, class IIb; InterPro IPR004365:IPR004364:IPR004522; KEGG: fbc:FB2170_03215 asparaginyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; PRIAM: Asparagine--tRNA ligase; SPTR: Asparaginyl-tRNA synthetase; TIGRFAM: Asparaginyl-tRNA synthetase, class IIb; asparaginyl-tRNA synthetase complement(1980452..1981885) Muricauda ruestringensis DSM 13258 11054643 YP_004788276.1 CDS Murru_1814 NC_015945.1 1981976 1984375 R PFAM: MMPL family; COGs: COG1033 exporter of the RND superfamily protein; KEGG: rbi:RB2501_03840 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1981976..1984375) Muricauda ruestringensis DSM 13258 11054644 YP_004788277.1 CDS Murru_1815 NC_015945.1 1984451 1985005 R PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor; COGs: COG0233 Ribosome recycling factor; HAMAP: Ribosome recycling factor, bacterial-like; InterPro IPR002661:IPR015998; KEGG: rbi:RB2501_03835 ribosome recycling factor; PFAM: Ribosome recycling factor; SPTR: Ribosome-recycling factor; TIGRFAM: Ribosome recycling factor; ribosome-recycling factor complement(1984451..1985005) Muricauda ruestringensis DSM 13258 11054645 YP_004788278.1 CDS Murru_1816 NC_015945.1 1985048 1985755 R PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase; COGs: COG0528 Uridylate kinase; InterPro IPR001048:IPR015963; KEGG: fbc:FB2170_03195 uridylate kinase; PFAM: Aspartate/glutamate/uridylate kinase; PRIAM: UMP kinase; SPTR: Uridylate kinase; TIGRFAM: Uridylate kinase, bacteria; uridylate kinase complement(1985048..1985755) Muricauda ruestringensis DSM 13258 11054646 YP_004788279.1 CDS Murru_1817 NC_015945.1 1985888 1986712 R PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts; COGs: COG0264 Translation elongation factor Ts; HAMAP: Translation elongation factor EFTs/EF1B; InterPro IPR000449:IPR014039:IPR001816; KEGG: fbc:FB2170_03190 elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal; SPTR: Elongation factor Ts; TIGRFAM: Translation elongation factor EFTs/EF1B; elongation factor Ts complement(1985888..1986712) Muricauda ruestringensis DSM 13258 11054647 YP_004788280.1 CDS Murru_1818 NC_015945.1 1986793 1987893 R PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; COGs: COG0052 Ribosomal protein S2; InterPro IPR001865:IPR000445:IPR003583:IPR005706; KEGG: fbc:FB2170_03185 30S ribosomal protein S2; PFAM: Ribosomal protein S2; Helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding motif, class 1; SPTR: 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; 30S ribosomal protein S2 complement(1986793..1987893) Muricauda ruestringensis DSM 13258 11054648 YP_004788281.1 CDS Murru_1819 NC_015945.1 1988122 1988508 R PFAM: Ribosomal protein S9/S16; COGs: COG0103 Ribosomal protein S9; InterPro IPR000754; KEGG: zpr:ZPR_0515 30S ribosomal protein S9; PFAM: Ribosomal protein S9; SPTR: 30S ribosomal protein S9; 30S ribosomal protein S9 complement(1988122..1988508) Muricauda ruestringensis DSM 13258 11054649 YP_004788282.1 CDS Murru_1820 NC_015945.1 1988508 1988963 R PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type; COGs: COG0102 Ribosomal protein L13; InterPro IPR005823:IPR005822; KEGG: fbc:FB2170_03175 50S ribosomal protein L13; PFAM: Ribosomal protein L13; SPTR: 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; 50S ribosomal protein L13 complement(1988508..1988963) Muricauda ruestringensis DSM 13258 11054650 YP_004788283.1 CDS Murru_1821 NC_015945.1 1989210 1991861 D PFAM: Domain of unknown function (DUF1083); KEGG: fbc:FB2170_03170 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1989210..1991861 Muricauda ruestringensis DSM 13258 11054651 YP_004788284.1 CDS Murru_1822 NC_015945.1 1992023 1993123 R PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; HAMAP: Histidinol-phosphate aminotransferase; InterPro IPR004839:IPR005861; KEGG: amu:Amuc_2138 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: Histidinol-phosphate transaminase; SPTR: Histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase complement(1992023..1993123) Muricauda ruestringensis DSM 13258 11054652 YP_004788285.1 CDS Murru_1823 NC_015945.1 1993139 1993435 R PFAM: Plasmid stabilisation system protein; COGs: COG3668 Plasmid stabilization system protein; InterPro IPR007712; KEGG: dak:DaAHT2_1800 plasmid stabilization system; PFAM: Plasmid stabilisation system; SPTR: Putative uncharacterized protein; plasmid stabilization system complement(1993139..1993435) Muricauda ruestringensis DSM 13258 11054653 YP_004788286.1 CDS Murru_1824 NC_015945.1 1993432 1993656 R PFAM: Uncharacterised protein family (UPF0156); TIGRFAM: putative addiction module antidote protein, CC2985 family; InterPro IPR005360; KEGG: rbi:RB2501_13544 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Putative addiction module antidote protein, CC2985; addiction module antidote protein complement(1993432..1993656) Muricauda ruestringensis DSM 13258 11054654 YP_004788287.1 CDS Murru_1825 NC_015945.1 1993840 1994709 R PFAM: Flavin reductase like domain; COGs: COG1853 Conserved protein/domain typically associated with flavoprotein oxygenase DIM6/NTAB family; InterPro IPR002563; KEGG: mtt:Ftrac_3079 flavin reductase domain protein fmn-binding protein; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding; SPTR: Putative uncharacterized protein; FMN-binding flavin reductase domain-containing protein complement(1993840..1994709) Muricauda ruestringensis DSM 13258 11054655 YP_004788288.1 CDS Murru_1826 NC_015945.1 1994860 1996080 R PFAM: Domain of unknown function (DUF1969); Fumarylacetoacetate (FAA) hydrolase family; TIGRFAM: fumarylacetoacetase; COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR005959:IPR015377:IPR002529; KEGG: ran:Riean_0663 fumarylacetoacetase; PFAM: Fumarylacetoacetase, N-terminal; Fumarylacetoacetase, C-terminal-like; PRIAM: Fumarylacetoacetase; SPTR: Fumarylacetoacetase; TIGRFAM: Fumarylacetoacetase; fumarylacetoacetase complement(1994860..1996080) Muricauda ruestringensis DSM 13258 11054656 YP_004788289.1 CDS Murru_1827 NC_015945.1 1996239 1997396 R PFAM: homogentisate 1,2-dioxygenase; TIGRFAM: homogentisate 1,2-dioxygenase; COGs: COG3508 Homogentisate 1 2-dioxygenase; InterPro IPR005708; KEGG: rbi:RB2501_04125 homogentisate 1,2-dioxygenase; PFAM: Homogentisate 1,2-dioxygenase; SPTR: Homogentisate 1,2-dioxygenase; homogentisate 12-dioxygenase complement(1996239..1997396) Muricauda ruestringensis DSM 13258 11054657 YP_004788290.1 CDS Murru_1828 NC_015945.1 1997478 1998611 R PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; COGs: COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins; InterPro IPR005956:IPR004360; KEGG: dfe:Dfer_2107 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; PRIAM: 4-hydroxyphenylpyruvate dioxygenase; SPTR: 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; 4-hydroxyphenylpyruvate dioxygenase complement(1997478..1998611) Muricauda ruestringensis DSM 13258 11054658 YP_004788291.1 CDS Murru_1829 NC_015945.1 1998731 1999246 D PFAM: MarR family; InterPro IPR000835; KEGG: dfe:Dfer_3933 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; regulatory protein MarR 1998731..1999246 Muricauda ruestringensis DSM 13258 11054659 YP_004788292.1 CDS Murru_1830 NC_015945.1 1999222 1999971 R PFAM: Sulfite exporter TauE/SafE; InterPro IPR002781; KEGG: fbc:FB2170_09461 hypothetical protein; PFAM: Protein of unknown function DUF81; SPTR: Putative uncharacterized protein; hypothetical protein complement(1999222..1999971) Muricauda ruestringensis DSM 13258 11054660 YP_004788293.1 CDS Murru_1831 NC_015945.1 2000151 2000714 D hypothetical protein 2000151..2000714 Muricauda ruestringensis DSM 13258 11054661 YP_004788294.1 CDS Murru_1832 NC_015945.1 2000785 2004060 R PFAM: WD40-like Beta Propeller Repeat; Peptidase family S41; COGs: COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system; InterPro IPR011659:IPR005151; KEGG: gau:GAU_2322 tricorn protease; PFAM: Peptidase S41; WD40-like Beta Propeller; SMART: Peptidase S41; SPTR: Peptidase S41; peptidase S41 complement(2000785..2004060) Muricauda ruestringensis DSM 13258 11054662 YP_004788295.1 CDS Murru_1833 NC_015945.1 2004164 2004439 R PFAM: Thioredoxin; KEGG: sua:Saut_0307 thioredoxin domain-containing protein; SPTR: Thioredoxin-like protein; thioredoxin domain-containing protein complement(2004164..2004439) Muricauda ruestringensis DSM 13258 11054663 YP_004788296.1 CDS Murru_1834 NC_015945.1 2004460 2005278 R PFAM: NIPSNAP; InterPro IPR012577; KEGG: fbc:FB2170_01866 hypothetical protein; PFAM: NIPSNAP; SPTR: Putative uncharacterized protein; NIPSNAP family containing protein complement(2004460..2005278) Muricauda ruestringensis DSM 13258 11054664 YP_004788297.1 CDS Murru_1835 NC_015945.1 2005518 2006180 R KEGG: lic:LIC12005 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2005518..2006180) Muricauda ruestringensis DSM 13258 11054665 YP_004788298.1 CDS Murru_1836 NC_015945.1 2006348 2006860 R KEGG: shl:Shal_2177 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2006348..2006860) Muricauda ruestringensis DSM 13258 11054666 YP_004788299.1 CDS Murru_1837 NC_015945.1 2006888 2009722 R PFAM: 3'-5' exonuclease; 5'-3' exonuclease, C-terminal SAM fold; 5'-3' exonuclease, N-terminal resolvase-like domain; DNA polymerase family A; TIGRFAM: DNA polymerase I; COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterProIPR018320:IPR020046:IPR020047:IPR002562:IPR 001098:IPR002421:IPR008918; KEGG: fbc:FB2170_03150 DNA polymerase I; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, alpha-helical arch, N-terminal; 5'-3' exonuclease, SAM-fold domain; 3'-5' exonuclease; SMART: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; 3'-5' exonuclease; SPTR: DNA polymerase I; TIGRFAM: DNA polymerase 1; DNA polymerase I complement(2006888..2009722) Muricauda ruestringensis DSM 13258 11054667 YP_004788300.1 CDS Murru_1838 NC_015945.1 2009889 2010890 R PFAM: Asparaginase; COGs: COG1446 Asparaginase; InterPro IPR006311:IPR000246; KEGG: fbc:FB2170_03145 asparaginase; PFAM: Peptidase T2, asparaginase 2; PRIAM:N(4)-(beta-N-acetylglucosaminyl)-L-asparagina se; SPTR: Asparaginase; N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase complement(2009889..2010890) Muricauda ruestringensis DSM 13258 11054668 YP_004788301.1 CDS Murru_1839 NC_015945.1 2010931 2011650 D PFAM: CutC family; COGs: COG3142 Uncharacterized protein involved in copper resistance; InterPro IPR005627; KEGG: fbc:FB2170_03140 copper homeostasis protein; PFAM: CutC; SPTR: Copper homeostasis protein; CutC family protein 2010931..2011650 Muricauda ruestringensis DSM 13258 11054669 YP_004788302.1 CDS Murru_1840 NC_015945.1 2011705 2012940 D PFAM: Calcineurin-like phosphoesterase; COGs: COG1408 phosphohydrolase; InterPro IPR004843; KEGG: fbc:FB2170_03135 hypothetical protein; PFAM: Metallo-dependent phosphatase; SPTR: Putative uncharacterized protein; metallophosphoesterase 2011705..2012940 Muricauda ruestringensis DSM 13258 11054670 YP_004788303.1 CDS Murru_1841 NC_015945.1 2012985 2013446 R PFAM: CBS domain; COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR000644; KEGG: fbc:FB2170_09526 CBS domain-containing protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain protein; hypothetical protein complement(2012985..2013446) Muricauda ruestringensis DSM 13258 11054671 YP_004788304.1 CDS Murru_1842 NC_015945.1 2013716 2014015 D PFAM: Thioredoxin; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766; KEGG: fbc:FB2170_03130 putative thioredoxin; PFAM: Thioredoxin domain; SPTR: Putative thioredoxin; thioredoxin domain-containing protein 2013716..2014015 Muricauda ruestringensis DSM 13258 11054672 YP_004788305.1 CDS Murru_1843 NC_015945.1 2014175 2017507 R PFAM: Protein of unknown function (DUF2723); KEGG: fbc:FB2170_03125 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2014175..2017507) Muricauda ruestringensis DSM 13258 11054673 YP_004788306.1 CDS Murru_1844 NC_015945.1 2017809 2018411 R KEGG: mtt:Ftrac_1734 fe-S-cluster oxidoreductase; SPTR: Fe-S-cluster oxidoreductase; fe-S-cluster oxidoreductase complement(2017809..2018411) Muricauda ruestringensis DSM 13258 11054675 YP_004788307.1 CDS Murru_1845 NC_015945.1 2018629 2022066 R PFAM: PA14 domain; InterPro IPR003367:IPR001304:IPR011658; KEGG: fjo:Fjoh_1720 C-type lectin domain-containing protein; PFAM: C-type lectin; Thrombospondin, type 3-like repeat; SMART: PA14; SPTR: Putative uncharacterized protein; C-type lectin domain-containing protein complement(2018629..2022066) Muricauda ruestringensis DSM 13258 11054676 YP_004788308.1 CDS Murru_1846 NC_015945.1 2022386 2022847 D PFAM: Uncharacterised BCR, YhbC family COG0779; HAMAP: Ribosome maturation factor RimP; InterPro IPR003728; KEGG: fbc:FB2170_03110 hypothetical protein; PFAM: Ribosome maturation factor RimP; SPTR: Ribosome maturation factor rimP; ribosome maturation factor rimP 2022386..2022847 Muricauda ruestringensis DSM 13258 11054677 YP_004788309.1 CDS Murru_1847 NC_015945.1 2022860 2024092 D PFAM: NusA N-terminal domain; TIGRFAM: transcription termination factor NusA; COGs: COG0195 Transcription elongation factor; InterPro IPR010213:IPR013735; KEGG: fbc:FB2170_03105 transcription elongation factor NusA; PFAM: Transcription factor NusA, N-terminal; SPTR: Transcription elongation factor NusA; TIGRFAM: Transcription termination factor NusA; NusA antitermination factor 2022860..2024092 Muricauda ruestringensis DSM 13258 11054678 YP_004788310.1 CDS Murru_1848 NC_015945.1 2024135 2026876 D PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2; COGs: COG0532 Translation initiation factor 2 (IF-2; GTPase); InterProIPR000178:IPR005225:IPR006847:IPR000795:IPR 004161; KEGG: fbc:FB2170_03100 translation initiation factor IF-2; PFAM: Protein synthesis factor, GTP-binding; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2; SPTR: Translation initiation factor IF-2; TIGRFAM: Translation initiation factor aIF-2, bacterial-like; Small GTP-binding protein; translation initiation factor IF-2 2024135..2026876 Muricauda ruestringensis DSM 13258 11054679 YP_004788311.1 CDS Murru_1849 NC_015945.1 2026928 2027299 R PFAM: Sporulation related domain; InterPro IPR007730; KEGG: fbc:FB2170_03095 translation initiation factor IF-2; PFAM: Sporulation-related domain; SPTR: Translation initiation factor IF-2; sporulation domain-containing protein complement(2026928..2027299) Muricauda ruestringensis DSM 13258 11054680 YP_004788312.1 CDS Murru_1850 NC_015945.1 2027535 2028902 D PFAM: Class III cytochrome C family; Cytochrome c; InterPro IPR003088; KEGG: fbc:FB2170_03090 cytochrome c3; PFAM: Cytochrome c, class I; SPTR: Cytochrome c3; cytochrome c class I 2027535..2028902 Muricauda ruestringensis DSM 13258 11054681 YP_004788313.1 CDS Murru_1851 NC_015945.1 2028935 2032054 D COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR006311:IPR001450; KEGG: fbc:FB2170_03085 molybdopterin oxidoreductase, iron-sulfur binding subunit; PFAM: 4Fe-4S binding domain; SPTR: Molybdopterin oxidoreductase, iron-sulfur binding subunit; 4Fe-4S ferredoxin 2028935..2032054 Muricauda ruestringensis DSM 13258 11054682 YP_004788314.1 CDS Murru_1852 NC_015945.1 2032088 2033839 D PFAM: Polysulphide reductase, NrfD; COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: fbc:FB2170_03080 molybdopterin oxidoredutase membrane subunit; PFAM: Polysulphide reductase, NrfD; SPTR: Molybdopterin oxidoredutase membrane subunit; polysulfide reductase NrfD 2032088..2033839 Muricauda ruestringensis DSM 13258 11054683 YP_004788315.1 CDS Murru_1853 NC_015945.1 2033842 2034369 D PFAM: Protein of unknown function (DUF3341); KEGG: rbi:RB2501_03705 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2033842..2034369 Muricauda ruestringensis DSM 13258 11054684 YP_004788316.1 CDS Murru_1854 NC_015945.1 2034374 2034943 D PFAM: Cytochrome c; InterPro IPR003088; KEGG: fbc:FB2170_03070 hypothetical protein; PFAM: Cytochrome c, class I; SPTR: Putative uncharacterized protein; cytochrome c class I 2034374..2034943 Muricauda ruestringensis DSM 13258 11054685 YP_004788317.1 CDS Murru_1855 NC_015945.1 2034961 2036298 D KEGG: rbi:RB2501_03695 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2034961..2036298 Muricauda ruestringensis DSM 13258 11054686 YP_004788318.1 CDS Murru_1856 NC_015945.1 2036332 2037456 D PFAM: Cytochrome C oxidase subunit II, periplasmic domain; Cytochrome C oxidase subunit II, transmembrane domain; COGs: COG1622 Heme/copper-type cytochrome/quinol oxidase subunit 2; InterPro IPR011759:IPR002429; KEGG: fbc:FB2170_03060 putative alternative cytochrome c oxidase polypeptide II transmembrane protein; PFAM: Cytochrome C oxidase subunit II, transmembrane domain; Cytochrome c oxidase subunit II C-terminal; SPTR: Cytochrome c oxidase subunit 2; cytochrome C oxidase subunit II transmembrane region 2036332..2037456 Muricauda ruestringensis DSM 13258 11054687 YP_004788319.1 CDS Murru_1857 NC_015945.1 2037494 2039317 D PFAM: Cytochrome C and Quinol oxidase polypeptide I; COGs: COG0843 Heme/copper-type cytochrome/quinol oxidase subunit 1; InterPro IPR000883; KEGG: fbc:FB2170_03055 putative cytochrome c oxidase polypeptide I; PFAM: Cytochrome c oxidase, subunit I; SPTR: Probable cytochrome c oxidase polypeptide i (Cytochrome bb3 subunit 1) oxidoreductase protein; cytochrome c oxidase subunit I 2037494..2039317 Muricauda ruestringensis DSM 13258 11054688 YP_004788320.1 CDS Murru_1858 NC_015945.1 2039441 2040265 D PFAM: Protein of unknown function (DUF2807); KEGG: fbc:FB2170_03050 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2039441..2040265 Muricauda ruestringensis DSM 13258 11054689 YP_004788321.1 CDS Murru_1859 NC_015945.1 2040269 2042521 R PFAM: Acyl-CoA oxidase; Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090:IPR002655; KEGG: rbi:RB2501_03675 acyl-coenzyme A oxidase I; PFAM: Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase, C-terminal; PRIAM: Acyl-CoA oxidase; SPTR: Acyl-coenzyme A oxidase I, putative; acyl-CoA oxidase complement(2040269..2042521) Muricauda ruestringensis DSM 13258 11054690 YP_004788322.1 CDS Murru_1860 NC_015945.1 2042648 2043670 D PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit; COGs: COG2255 Holliday junction resolvasome helicase subunit; HAMAP: DNA helicase, Holliday junction RuvB type; InterProIPR004605:IPR008824:IPR003959:IPR008823:IPR 003593; KEGG: fbc:FB2170_03040 Holliday junction DNA helicase RuvB; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal; SMART: ATPase, AAA+ type, core; SPTR: Holliday junction ATP-dependent DNA helicase ruvB; TIGRFAM: DNA helicase, Holliday junction RuvB type; Holliday junction DNA helicase subunit RuvB 2042648..2043670 Muricauda ruestringensis DSM 13258 11054691 YP_004788323.1 CDS Murru_1861 NC_015945.1 2043955 2044947 D PFAM: Cytochrome c; COGs: COG3258 Cytochrome c; KEGG: mtt:Ftrac_3649 cytochrome c family protein; SPTR: Putative uncharacterized protein; cytochrome c family protein 2043955..2044947 Muricauda ruestringensis DSM 13258 11054692 YP_004788324.1 CDS Murru_1862 NC_015945.1 2044960 2045634 D InterPro IPR006311; KEGG: cpi:Cpin_2598 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2044960..2045634 Muricauda ruestringensis DSM 13258 11054693 YP_004788325.1 CDS Murru_1863 NC_015945.1 2045638 2046048 D PFAM: DsrE/DsrF-like family; COGs: COG1416 conserved hypothetical protein; KEGG: slt:Slit_1694 domain of unknown function DUF1791; SPTR: Putative uncharacterized protein; hypothetical protein 2045638..2046048 Muricauda ruestringensis DSM 13258 11054694 YP_004788326.1 CDS Murru_1864 NC_015945.1 2046054 2046479 D PFAM: GIY-YIG catalytic domain; COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: gfo:GFO_0169 excinuclease ABC subunit C; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: Protein containing N-terminal domain of the UvrABC system protein C; excinuclease ABC C subunit domain-containing protein 2046054..2046479 Muricauda ruestringensis DSM 13258 11054695 YP_004788327.1 CDS Murru_1865 NC_015945.1 2046507 2047430 D PFAM: Domain of unknown function (DUF1730); TIGRFAM: iron-sulfur cluster binding protein, putative; COGs: COG1600 Uncharacterized Fe-S protein; InterPro IPR013542:IPR001450; KEGG: gfo:GFO_0176 4Fe-4S binding domain-containing protein; PFAM: Domain of unknown function DUF1730; 4Fe-4S binding domain; SPTR: Iron-sulfur cluster binding protein; hypothetical protein 2046507..2047430 Muricauda ruestringensis DSM 13258 11054696 YP_004788328.1 CDS Murru_1866 NC_015945.1 2047597 2049894 D PFAM: Malic enzyme, NAD binding domain; Phosphate acetyl/butaryl transferase; Malic enzyme, N-terminal domain; TIGRFAM: phosphate acetyltransferase; COGs: COG0281 Malic enzyme; InterPro IPR012301:IPR012302:IPR002505; KEGG: fbc:FB2170_03030 putative NADP-dependent malic enzyme; PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; Phosphate acetyl/butaryl transferase; SMART: Malic enzyme, NAD-binding; SPTR: Putative NADP-dependent malic enzyme; NAD-binding malic protein 2047597..2049894 Muricauda ruestringensis DSM 13258 11054697 YP_004788329.1 CDS Murru_1867 NC_015945.1 2049918 2050499 D PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit; COGs: COG0632 Holliday junction resolvasome DNA-binding subunit; HAMAP: Bacterial DNA recombination protein RuvA; InterPro IPR000085:IPR013849:IPR011114:IPR003583; KEGG: fbc:FB2170_03025 Holliday junction DNA helicase motor protein; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; DNA helicase, Holliday junction RuvA type, domain III, C-terminal; SPTR: Holliday junction ATP-dependent DNA helicase ruvA; TIGRFAM: Bacterial DNA recombination protein RuvA; Holliday junction DNA helicase subunit RuvA 2049918..2050499 Muricauda ruestringensis DSM 13258 11054698 YP_004788330.1 CDS Murru_1868 NC_015945.1 2050505 2057608 D KEGG: fbc:FB2170_03020 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 2050505..2057608 Muricauda ruestringensis DSM 13258 11054699 YP_004788331.1 CDS Murru_1869 NC_015945.1 2057712 2058092 D PFAM: Glycine cleavage H-protein; TIGRFAM: glycine cleavage system H protein; COGs: COG0509 Glycine cleavage system H protein (lipoate-binding); HAMAP: Glycine cleavage H-protein; InterPro IPR017453:IPR002930; KEGG: gfo:GFO_0183 glycine cleavage system protein H; PFAM: Glycine cleavage H-protein; SPTR: Glycine cleavage system H protein; TIGRFAM: Glycine cleavage H-protein, subgroup; glycine cleavage system H protein 2057712..2058092 Muricauda ruestringensis DSM 13258 11054700 YP_004788332.1 CDS Murru_1870 NC_015945.1 2058142 2058492 D PFAM: VanZ like family; InterPro IPR006976; KEGG: rbi:RB2501_03605 hypothetical protein; PFAM: VanZ-like; SPTR: Putative uncharacterized protein; VanZ family protein 2058142..2058492 Muricauda ruestringensis DSM 13258 11054701 YP_004788333.1 CDS Murru_1871 NC_015945.1 2058556 2059260 D PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR006260; KEGG: rbi:RB2501_03600 TonB; PFAM: TonB, C-terminal; SPTR: TonB; TIGRFAM: TonB, C-terminal; TonB family protein 2058556..2059260 Muricauda ruestringensis DSM 13258 11054702 YP_004788334.1 CDS Murru_1872 NC_015945.1 2059418 2060320 D PFAM: UbiA prenyltransferase family; TIGRFAM: protoheme IX farnesyltransferase; COGs: COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor); HAMAP: Protohaem IX farnesyltransferase; InterPro IPR006369:IPR000537; KEGG: fbc:FB2170_02995 protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; SPTR: Protoheme IX farnesyltransferase; TIGRFAM: Protohaem IX farnesyltransferase; Protoheme IX farnesyltransferase 2059418..2060320 Muricauda ruestringensis DSM 13258 11054703 YP_004788335.1 CDS Murru_1873 NC_015945.1 2060322 2060903 D PFAM: Cytochrome c oxidase subunit III; COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: fbc:FB2170_02990 cytochrome o ubiquinol oxidase subunit III; PFAM: Cytochrome c oxidase, subunit III; SPTR: Cytochrome o ubiquinol oxidase subunit III; cytochrome c oxidase subunit III 2060322..2060903 Muricauda ruestringensis DSM 13258 11054704 YP_004788336.1 CDS Murru_1874 NC_015945.1 2060996 2061970 D PFAM: Cytochrome c oxidase subunit III; COGs: COG1845 Heme/copper-type cytochrome/quinol oxidase subunit 3; InterPro IPR000298; KEGG: fbc:FB2170_02985 cytochrome c oxidase subunit III; PFAM: Cytochrome c oxidase, subunit III; SPTR: Cytochrome c oxidase subunit III; cytochrome c oxidase subunit III 2060996..2061970 Muricauda ruestringensis DSM 13258 11054705 YP_004788337.1 CDS Murru_1875 NC_015945.1 2061986 2062369 D KEGG: rbi:RB2501_03580 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2061986..2062369 Muricauda ruestringensis DSM 13258 11054706 YP_004788338.1 CDS Murru_1876 NC_015945.1 2062440 2063072 D KEGG: fbc:FB2170_02975 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2062440..2063072 Muricauda ruestringensis DSM 13258 11054707 YP_004788339.1 CDS Murru_1877 NC_015945.1 2063053 2063796 D PFAM: SCO1/SenC; COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: fbc:FB2170_02970 YpmQ; PFAM: Copper chaperone SCO1/SenC; SPTR: YpmQ; electron transport protein SCO1/SenC 2063053..2063796 Muricauda ruestringensis DSM 13258 11054708 YP_004788340.1 CDS Murru_1878 NC_015945.1 2063793 2064329 D PFAM: Protein of unknown function (DUF420); COGs: COG2322 membrane protein; InterPro IPR007352; KEGG: fbc:FB2170_02965 hypothetical protein; PFAM: Protein of unknown function DUF420; SPTR: Putative uncharacterized protein; hypothetical protein 2063793..2064329 Muricauda ruestringensis DSM 13258 11054709 YP_004788341.1 CDS Murru_1879 NC_015945.1 2064337 2064549 D KEGG: fbc:FB2170_02960 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2064337..2064549 Muricauda ruestringensis DSM 13258 11054710 YP_004788342.1 CDS Murru_1881 NC_015945.1 2064898 2065599 D PFAM: ABC transporter; TIGRFAM: putative bacteriocin export ABC transporter, lactococcin 972 group; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: rbi:RB2501_03535 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; phosphonate-transporting ATPase 2064898..2065599 Muricauda ruestringensis DSM 13258 11054712 YP_004788343.1 CDS Murru_1882 NC_015945.1 2065592 2066821 D PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: rbi:RB2501_03530 putative ABC transporter; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative ABC transporter; hypothetical protein 2065592..2066821 Muricauda ruestringensis DSM 13258 11054713 YP_004788344.1 CDS Murru_1883 NC_015945.1 2066824 2068080 D PFAM: Predicted permease; COGs: COG0577 ABC-type antimicrobial peptide transport system permease component; InterPro IPR003838; KEGG: rbi:RB2501_03525 putative ATP-binding component of ABC transporter; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative ATP-binding component of ABC transporter; hypothetical protein 2066824..2068080 Muricauda ruestringensis DSM 13258 11054714 YP_004788345.1 CDS Murru_1884 NC_015945.1 2068119 2069237 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: rbi:RB2501_03520 membrane fusion efflux protein; PFAM: Secretion protein HlyD; SPTR: Membrane fusion efflux protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 2068119..2069237 Muricauda ruestringensis DSM 13258 11054715 YP_004788346.1 CDS Murru_1885 NC_015945.1 2069280 2070629 D PFAM: Outer membrane efflux protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: fbc:FB2170_02920 putative outer membrane transport/efflux protein; PFAM: Outer membrane efflux protein; SPTR: Putative outer membrane transport/efflux protein; outer membrane efflux protein 2069280..2070629 Muricauda ruestringensis DSM 13258 11054716 YP_004788347.1 CDS Murru_1886 NC_015945.1 2070637 2071326 D PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ; COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone; InterPro IPR022496:IPR000905; KEGG: fbc:FB2170_02915 putative glycoprotease family exported protein; PFAM: Peptidase M22, glycoprotease; SPTR: Putative glycoprotease family exported protein; TIGRFAM: Conserved hypothetical protein CHP03725, YeaZ; hypothetical protein 2070637..2071326 Muricauda ruestringensis DSM 13258 11054717 YP_004788348.1 CDS Murru_1887 NC_015945.1 2071323 2072150 R PFAM: Mechanosensitive ion channel; Conserved TM helix; COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: rbi:RB2501_03500 small-conductance mechanosensitive channel; PFAM: Mechanosensitive ion channel MscS; SPTR: Small-conductance mechanosensitive channel; mechanosensitive ion channel protein MscS complement(2071323..2072150) Muricauda ruestringensis DSM 13258 11054718 YP_004788349.1 CDS Murru_1888 NC_015945.1 2072234 2074333 R PFAM: Protein of unknown function, DUF255; Glycosyl hydrolase family 76; COGs: COG1331 Highly conserved protein containing a thioredoxin domain; InterPro IPR004879; KEGG: cat:CA2559_01090 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2072234..2074333) Muricauda ruestringensis DSM 13258 11054719 YP_004788350.1 CDS Murru_1889 NC_015945.1 2074401 2074601 R PFAM: Protein of unknown function (DUF1458); InterPro IPR009923; KEGG: fbc:FB2170_02910 hypothetical protein; PFAM: Dodecin flavoprotein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2074401..2074601) Muricauda ruestringensis DSM 13258 11054720 YP_004788351.1 CDS Murru_1890 NC_015945.1 2074674 2075597 R PFAM: Scaffold protein Nfu/NifU N terminal; NifU-like domain; COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR014824:IPR001075; KEGG: fbc:FB2170_02905 NifU-like protein; PFAM: NIF system FeS cluster assembly, NifU, C-terminal; NIF system FeS cluster assembly, NifU-like scaffold, N-terminal; SMART: NIF system FeS cluster assembly, NifU-like scaffold, N-terminal; SPTR: NifU related protein; nitrogen-fixing NifU domain-containing protein complement(2074674..2075597) Muricauda ruestringensis DSM 13258 11054721 YP_004788352.1 CDS Murru_1891 NC_015945.1 2075696 2076691 D PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: fbc:FB2170_02900 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein 2075696..2076691 Muricauda ruestringensis DSM 13258 11054722 YP_004788353.1 CDS Murru_1892 NC_015945.1 2077007 2078182 R PFAM: von Willebrand factor type A domain; InterPro IPR002035; KEGG: fbc:FB2170_02895 hypothetical protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: Putative uncharacterized protein; von Willebrand factor type A complement(2077007..2078182) Muricauda ruestringensis DSM 13258 11054723 YP_004788354.1 CDS Murru_1893 NC_015945.1 2078381 2080597 D PFAM: Histidine kinase; COGs: COG3275 Putative regulator of cell autolysis; InterPro IPR001440:IPR010559:IPR019734; KEGG: fbc:FB2170_02885 histidine kinase; PFAM: Signal transduction histidine kinase, internal region; Tetratricopeptide TPR-1; SPTR: Histidine kinase; putative signal transduction histidine kinase 2078381..2080597 Muricauda ruestringensis DSM 13258 11054724 YP_004788355.1 CDS Murru_1894 NC_015945.1 2080594 2081328 D PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: fbc:FB2170_02880 response regulator; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SPTR: Response regulator; LytTR family two component transcriptional regulator 2080594..2081328 Muricauda ruestringensis DSM 13258 11054725 YP_004788356.1 CDS Murru_1895 NC_015945.1 2081417 2081926 D COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451; KEGG: fbc:FB2170_02875 hexapeptide transferase family protein; SPTR: Hexapeptide transferase family protein; hexapeptide transferase family protein 2081417..2081926 Muricauda ruestringensis DSM 13258 11054726 YP_004788357.1 CDS Murru_1896 NC_015945.1 2081974 2082858 D PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR004410:IPR014043:IPR020801; KEGG: fbc:FB2170_02870 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; PRIAM: [Acyl-carrier-protein] S-malonyltransferase; SMART: Polyketide synthase, acyl transferase domain; SPTR: Malonyl CoA-acyl carrier protein transacylase; TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; malonyl CoA-acyl carrier protein transacylase 2081974..2082858 Muricauda ruestringensis DSM 13258 11054727 YP_004788358.1 CDS Murru_1897 NC_015945.1 2083000 2087808 D PFAM: Calx-beta domain; InterPro IPR001434:IPR003644; KEGG: rbi:RB2501_03425 putative aggregation factor core protein MAFp3, isoform C; PFAM: Na-Ca exchanger/integrin-beta4; SMART: Na-Ca exchanger/integrin-beta4; SPTR: Probable aggregation factor core protein MAFp3, isoform C; TIGRFAM: Domain of unknown function DUF11; hypothetical protein 2083000..2087808 Muricauda ruestringensis DSM 13258 11054728 YP_004788359.1 CDS Murru_1898 NC_015945.1 2087810 2088799 D PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: rbi:RB2501_03420 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein 2087810..2088799 Muricauda ruestringensis DSM 13258 11054729 YP_004788360.1 CDS Murru_1899 NC_015945.1 2088801 2090747 D PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR006665; KEGG: fbc:FB2170_02855 OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: OmpA family protein; OmpA/MotB domain-containing protein 2088801..2090747 Muricauda ruestringensis DSM 13258 11054730 YP_004788361.1 CDS Murru_1900 NC_015945.1 2090749 2091993 R PFAM: Natural resistance-associated macrophage protein; COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; KEGG: rbi:RB2501_03405 NRAMP family protein; SPTR: Transporter, NRAMP family protein; NRAMP family protein complement(2090749..2091993) Muricauda ruestringensis DSM 13258 11054731 YP_004788362.1 CDS Murru_1901 NC_015945.1 2092268 2094643 R PFAM: Prolyl oligopeptidase family; Dipeptidyl peptidase IV (DPP IV) N-terminal region; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR011659:IPR002469:IPR001375; KEGG: gfo:GFO_3446 secreted dipeptidyl-peptidase IV family protein; SPTR: Secreted dipeptidyl-peptidase IV family protein; secreted dipeptidyl-peptidase IV family protein complement(2092268..2094643) Muricauda ruestringensis DSM 13258 11054732 YP_004788363.1 CDS Murru_1902 NC_015945.1 2094867 2096591 D PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR003953; KEGG: rbi:RB2501_09520 GMC oxidoreductase family protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: GMC oxidoreductase family protein; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 2094867..2096591 Muricauda ruestringensis DSM 13258 11054733 YP_004788364.1 CDS Murru_1903 NC_015945.1 2096596 2097306 D KEGG: rbi:RB2501_09525 Tat (twin-arginine translocation) pathway signal sequence domain-containing protein; SPTR: Tat (Twin-arginine translocation) pathway signal sequence domain protein; Tat (twin-arginine translocation) pathway signal sequence domain-containing protein 2096596..2097306 Muricauda ruestringensis DSM 13258 11054734 YP_004788365.1 CDS Murru_1904 NC_015945.1 2098594 2098854 R PFAM: GIY-YIG catalytic domain; InterPro IPR000305; KEGG: ppn:Palpr_2287 excinuclease ABC C subunit domain protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: GIY-YIG domain protein; manually curated; excinuclease ABC C subunit domain-containing protein complement(2098594..2098854) Muricauda ruestringensis DSM 13258 11054736 YP_004788366.1 CDS Murru_1905 NC_015945.1 2099112 2101733 R PFAM: MutS family domain IV; MutS domain II; MutS domain V; MutS domain I; MutS domain III; TIGRFAM: DNA mismatch repair protein MutS; COGs: COG0249 Mismatch repair ATPase (MutS family); HAMAP: DNA mismatch repair protein MutS, type 1; InterProIPR005748:IPR007695:IPR007860:IPR007696:IPR 007861:IPR000432; KEGG: fbc:FB2170_02830 DNA mismatch repair protein; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS, clamp; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; SPTR: DNA mismatch repair protein mutS; TIGRFAM: DNA mismatch repair protein MutS, type 1; DNA mismatch repair protein mutS complement(2099112..2101733) Muricauda ruestringensis DSM 13258 11054738 YP_004788367.1 CDS Murru_1906 NC_015945.1 2102025 2102558 D PFAM: SpoU rRNA Methylase family; COGs: COG0566 rRNA methylase; InterPro IPR001537; KEGG: fbc:FB2170_02825 putative SpoU rRNA methylase family protein; PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: Putative SpoU rRNA methylase family protein; tRNA/rRNA methyltransferase SpoU 2102025..2102558 Muricauda ruestringensis DSM 13258 11054739 YP_004788368.1 CDS Murru_1907 NC_015945.1 2102680 2103825 R PFAM: Deoxynucleoside kinase; 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; InterPro IPR000550:IPR002624; KEGG: fbc:FB2170_02820 deoxyguanosine kinase/deoxyadenosine kinase subunit; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; Deoxynucleoside kinase; PRIAM:2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase., Deoxyadenosine kinase; SPTR: Deoxyguanosine kinase/deoxyadenosine kinase subunit; TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(2102680..2103825) Muricauda ruestringensis DSM 13258 11054740 YP_004788369.1 CDS Murru_1908 NC_015945.1 2103895 2105655 D PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; signal peptide peptidase SppA, 67K type; COGs: COG0616 Periplasmic serine protease (ClpP class); InterPro IPR004634:IPR004635:IPR002142; KEGG: fbc:FB2170_02815 putative protease IV; PFAM: Peptidase S49; SPTR: Putative protease IV; TIGRFAM: Peptidase S49, protease IV; Peptidase S49, SppA; signal peptide peptidase SppA, 67K type 2103895..2105655 Muricauda ruestringensis DSM 13258 11054741 YP_004788370.1 CDS Murru_1909 NC_015945.1 2105696 2106403 D PFAM: Uncharacterized ACR, YhhQ family COG1738; TIGRFAM: conserved hypothetical integral membrane protein; COGs: COG1738 conserved hypothetical protein; InterPro IPR003744; KEGG: fbc:FB2170_02810 hypothetical protein; PFAM: Protein of unknown function DUF165; SPTR: Putative uncharacterized protein; TIGRFAM: Protein of unknown function DUF165; hypothetical protein 2105696..2106403 Muricauda ruestringensis DSM 13258 11054742 YP_004788371.1 CDS Murru_1910 NC_015945.1 2106440 2109145 D PFAM: AsmA family; InterPro IPR007844; KEGG: fbc:FB2170_02805 putative outer membrane protein; PFAM: AsmA; SPTR: Putative outer membrane protein; AsmA family protein 2106440..2109145 Muricauda ruestringensis DSM 13258 11054743 YP_004788372.1 CDS Murru_1911 NC_015945.1 2109155 2109379 R hypothetical protein complement(2109155..2109379) Muricauda ruestringensis DSM 13258 11054744 YP_004788373.1 CDS Murru_1912 NC_015945.1 2109459 2110262 R PFAM: Protein of unknown function (DUF2797); KEGG: fbc:FB2170_02800 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2109459..2110262) Muricauda ruestringensis DSM 13258 11054745 YP_004788374.1 CDS Murru_1913 NC_015945.1 2110361 2111875 D PFAM: GH3 auxin-responsive promoter; InterPro IPR004993; KEGG: fbc:FB2170_02795 putative auxin-regulated protein; PFAM: GH3 auxin-responsive promoter; SPTR: Putative auxin-regulated protein; GH3 auxin-responsive promoter 2110361..2111875 Muricauda ruestringensis DSM 13258 11054746 YP_004788375.1 CDS Murru_1914 NC_015945.1 2112050 2112592 D KEGG: fbc:FB2170_02790 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2112050..2112592 Muricauda ruestringensis DSM 13258 11054747 YP_004788376.1 CDS Murru_1915 NC_015945.1 2112594 2113829 R PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX); COGs: COG1219 ATP-dependent protease Clp ATPase subunit; HAMAP: Clp protease, ATP-binding subunit ClpX; InterProIPR004487:IPR010603:IPR013093:IPR019489:IPR 003593; KEGG: fbc:FB2170_02785 ATP-dependent protease ATP-binding subunit; PFAM: ATPase, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent protease ATP-binding subunit; TIGRFAM: Clp protease, ATP-binding subunit ClpX; sigma 54 interacting domain-containing protein complement(2112594..2113829) Muricauda ruestringensis DSM 13258 11054748 YP_004788377.1 CDS Murru_1916 NC_015945.1 2113918 2114595 R PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; COGs: COG0740 Protease subunit of ATP-dependent Clp protease; HAMAP: Peptidase S14, ClpP; InterPro IPR001907; KEGG: fbc:FB2170_02780 ATP-dependent Clp protease proteolytic subunit 2; PFAM: Peptidase S14, ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit 1; ATP-dependent Clp protease proteolytic subunit complement(2113918..2114595) Muricauda ruestringensis DSM 13258 11054749 YP_004788378.1 CDS Murru_1917 NC_015945.1 2114686 2116008 R PFAM: Bacterial trigger factor protein (TF) C-terminus; Bacterial trigger factor protein (TF); TIGRFAM: trigger factor; COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); InterPro IPR005215:IPR008881; KEGG: fbc:FB2170_02770 FKBP-type peptidyl-prolyl cis-transisomerase; PFAM: Trigger factor, ribosome-binding, bacterial; SPTR: FKBP-type peptidyl-prolyl cis-transisomerase (Trigger factor); TIGRFAM: Trigger factor; trigger factor complement(2114686..2116008) Muricauda ruestringensis DSM 13258 11054750 YP_004788379.1 CDS Murru_1918 NC_015945.1 2116108 2116452 R PFAM: Membrane protein of unknown function; InterPro IPR007165; KEGG: fbc:FB2170_02765 hypothetical protein; PFAM: Membrane protein of unknown function; SPTR: Putative uncharacterized protein; hypothetical protein complement(2116108..2116452) Muricauda ruestringensis DSM 13258 11054751 YP_004788380.1 CDS Murru_1919 NC_015945.1 2116525 2118027 R KEGG: rbi:RB2501_03300 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2116525..2118027) Muricauda ruestringensis DSM 13258 11054752 YP_004788381.1 CDS Murru_1920 NC_015945.1 2118164 2118934 R PFAM: alpha/beta hydrolase fold; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: fbc:FB2170_02755 alpha/beta fold family hydrolase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Hydrolase, alpha/beta fold family, putative; alpha/beta hydrolase fold protein complement(2118164..2118934) Muricauda ruestringensis DSM 13258 11054753 YP_004788382.1 CDS Murru_1921 NC_015945.1 2118934 2119650 R PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase; COGs: COG0854 Pyridoxal phosphate biosynthesis protein; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; InterPro IPR004569; KEGG: fbc:FB2170_02750 pyridoxal phosphate biosynthetic protein; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; PRIAM: Pyridoxine 5'-phosphate synthase; SPTR: Pyridoxine 5'-phosphate synthase; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; pyridoxine 5'-phosphate synthase complement(2118934..2119650) Muricauda ruestringensis DSM 13258 11054754 YP_004788383.1 CDS Murru_1922 NC_015945.1 2119737 2120393 D PFAM: CBS domain; InterPro IPR000644; KEGG: fbc:FB2170_02745 acetoin utilization protein; PFAM: Cystathionine beta-synthase, core; SPTR: Acetoin utilization protein, putative; hypothetical protein 2119737..2120393 Muricauda ruestringensis DSM 13258 11054755 YP_004788384.1 CDS Murru_1923 NC_015945.1 2120395 2121276 D PFAM: ATP-NAD kinase; COGs: COG0061 sugar kinase; HAMAP: Inorganic polyphosphate/ATP-NAD kinase, predicted; InterPro IPR002504; KEGG: fbc:FB2170_02740 inorganic polyphosphate/ATP-NAD kinase; PFAM: Inorganic polyphosphate/ATP-NAD kinase, predicted; SPTR: Probable inorganic polyphosphate/ATP-NAD kinase; inorganic polyphosphate/ATP-NAD kinase 2120395..2121276 Muricauda ruestringensis DSM 13258 11054756 YP_004788385.1 CDS Murru_1924 NC_015945.1 2121389 2122072 D KEGG: fbc:FB2170_02735 inorganic polyphosphate/ATP-NAD kinase; SPTR: Inorganic polyphosphate/ATP-NAD kinase; inorganic polyphosphate/ATP-NAD kinase 2121389..2122072 Muricauda ruestringensis DSM 13258 11054757 YP_004788386.1 CDS Murru_1925 NC_015945.1 2122038 2122814 D PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; COGs: COG0020 Undecaprenyl pyrophosphate synthase; HAMAP:Di-trans-poly-cis-decaprenylcistransferase-li ke; InterPro IPR001441; KEGG: fbc:FB2170_02730 undecaprenyl pyrophosphate synthetase; PFAM:Di-trans-poly-cis-decaprenylcistransferase-lik e; PRIAM: Di-trans,poly-cis-decaprenylcistransferase; SPTR: Undecaprenyl pyrophosphate synthetase; TIGRFAM:Di-trans-poly-cis-decaprenylcistransferase- like; undecaprenyl pyrophosphate synthase 2122038..2122814 Muricauda ruestringensis DSM 13258 11054758 YP_004788387.1 CDS Murru_1926 NC_015945.1 2122786 2125449 D PFAM: Surface antigen variable number repeat; TIGRFAM: outer membrane protein assembly complex, YaeT protein; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR016474:IPR010827:IPR000184; KEGG: fbc:FB2170_02725 putative outer membrane protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Putative outer membrane protein; TIGRFAM: Outer membrane assembly protein, YaeT; outer membrane protein assembly complex, YaeT protein 2122786..2125449 Muricauda ruestringensis DSM 13258 11054759 YP_004788388.1 CDS Murru_1927 NC_015945.1 2125548 2126369 D PFAM: Outer membrane protein (OmpH-like); InterPro IPR005632; KEGG: fbc:FB2170_02720 cationic outer membrane protein; PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH); SPTR: Cationic outer membrane protein; outer membrane chaperone Skp 2125548..2126369 Muricauda ruestringensis DSM 13258 11054760 YP_004788389.1 CDS Murru_1928 NC_015945.1 2126419 2126928 D PFAM: Outer membrane protein (OmpH-like); InterPro IPR005632; KEGG: fbc:FB2170_02715 hypothetical protein; PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH); SPTR: Putative uncharacterized protein; outer membrane chaperone Skp 2126419..2126928 Muricauda ruestringensis DSM 13258 11054761 YP_004788390.1 CDS Murru_1929 NC_015945.1 2127013 2127792 D PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase; COGs: COG0796 Glutamate racemase; HAMAP: Glutamate racemase; InterPro IPR004391:IPR015942; KEGG: fbc:FB2170_17296 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; PRIAM: Glutamate racemase; SPTR: Glutamate racemase; TIGRFAM: Glutamate racemase; glutamate racemase 2127013..2127792 Muricauda ruestringensis DSM 13258 11054762 YP_004788391.1 CDS Murru_1930 NC_015945.1 2127796 2128287 R PFAM: Dihydrofolate reductase; COGs: COG0262 Dihydrofolate reductase; InterPro IPR001796; KEGG: fbc:FB2170_17291 DfrA; PFAM: Dihydrofolate reductase domain; SPTR: Dihydrofolate reductase; dihydrofolate reductase subunit complement(2127796..2128287) Muricauda ruestringensis DSM 13258 11054763 YP_004788392.1 CDS Murru_1931 NC_015945.1 2128284 2128676 R KEGG: fbc:FB2170_17286 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2128284..2128676) Muricauda ruestringensis DSM 13258 11054764 YP_004788393.1 CDS Murru_1932 NC_015945.1 2128731 2129810 D PFAM: Aminotransferase class-V; COGs: COG0520 Selenocysteine lyase; InterPro IPR000192; KEGG: zpr:ZPR_3672 class-V aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase; SPTR: Selenocysteine lyase; class V aminotransferase 2128731..2129810 Muricauda ruestringensis DSM 13258 11054765 YP_004788394.1 CDS Murru_1933 NC_015945.1 2129968 2130264 D PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); InterPro IPR004193; KEGG: fbc:FB2170_17281 putative isoamylase protein; PFAM: Glycoside hydrolase, family 13, N-terminal; SPTR: Putative isoamylase protein; glycoside hydrolase 2129968..2130264 Muricauda ruestringensis DSM 13258 11054766 YP_004788395.1 CDS Murru_1934 NC_015945.1 2130355 2130585 R KEGG: mtt:Ftrac_1254 hypothetical protein; hypothetical protein complement(2130355..2130585) Muricauda ruestringensis DSM 13258 11054767 YP_004788396.1 CDS Murru_1935 NC_015945.1 2130802 2131635 R PFAM: Putative esterase; COGs: COG2819 hydrolase of the alpha/beta superfamily; InterPro IPR000801; KEGG: mtt:Ftrac_1320 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Putative esterase; SPTR: Putative uncharacterized protein; esterase complement(2130802..2131635) Muricauda ruestringensis DSM 13258 11054768 YP_004788397.1 CDS Murru_1936 NC_015945.1 2131708 2132136 R PFAM: Stress responsive A/B Barrel Domain; InterPro IPR013097; KEGG: fbc:FB2170_00990 hypothetical protein; PFAM: Stress responsive alpha-beta barrel; SMART: Stress responsive alpha-beta barrel; SPTR: Stress responsive alpha-beta barrel domain protein; stress responsive alpha-beta barrel domain-containing protein complement(2131708..2132136) Muricauda ruestringensis DSM 13258 11054769 YP_004788398.1 CDS Murru_1937 NC_015945.1 2132407 2133312 R PFAM: RES domain; KEGG: ppn:Palpr_0141 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2132407..2133312) Muricauda ruestringensis DSM 13258 11054770 YP_004788399.1 CDS Murru_1938 NC_015945.1 2133361 2134185 R PFAM: Thymidylate synthase; TIGRFAM: thymidylate synthase; COGs: COG0207 Thymidylate synthase; HAMAP: Thymidylate synthase; InterPro IPR000398; KEGG: fbc:FB2170_17276 thymidylate synthase; PFAM: Thymidylate synthase; PRIAM: Thymidylate synthase; SPTR: Thymidylate synthase; TIGRFAM: Thymidylate synthase; Thymidylate synthase complement(2133361..2134185) Muricauda ruestringensis DSM 13258 11054771 YP_004788400.1 CDS Murru_1939 NC_015945.1 2134651 2136111 R PFAM: Na+ dependent nucleoside transporter C-terminus; Na+ dependent nucleoside transporter N-terminus; Nucleoside recognition; TIGRFAM: nucleoside transporter; COGs: COG1972 Nucleoside permease; InterPro IPR002668:IPR011642:IPR011657; KEGG: fbc:FB2170_17271 nucleoside transporter; PFAM: Na dependent nucleoside transporter, C-terminal; Na dependent nucleoside transporter; Nucleoside recognition; SPTR: Nucleoside transporter; Na+ dependent nucleoside transporter domain-containing protein complement(2134651..2136111) Muricauda ruestringensis DSM 13258 11054772 YP_004788401.1 CDS Murru_1940 NC_015945.1 2136125 2136754 R PFAM: Uncharacterised ACR, COG1259; UvrB/uvrC motif; COGs: COG1259 conserved hypothetical protein; InterPro IPR003729:IPR001943; KEGG: fbc:FB2170_17266 hypothetical protein; PFAM: Domain of unknown function DUF151; UvrB/UvrC protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2136125..2136754) Muricauda ruestringensis DSM 13258 11054773 YP_004788402.1 CDS Murru_1941 NC_015945.1 2136844 2137812 R PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain; COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730:IPR014731; KEGG: fbc:FB2170_17261 electron transfer flavoprotein subunit alpha; PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha complement(2136844..2137812) Muricauda ruestringensis DSM 13258 11054774 YP_004788403.1 CDS Murru_1942 NC_015945.1 2138001 2138747 R PFAM: Electron transfer flavoprotein domain; COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014730; KEGG: fbc:FB2170_17256 electron transfer flavoprotein subunit beta; PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein (Beta subunit); electron transfer flavoprotein subunit alpha/beta complement(2138001..2138747) Muricauda ruestringensis DSM 13258 11054775 YP_004788404.1 CDS Murru_1943 NC_015945.1 2138916 2139896 D PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR005475:IPR005476; KEGG: zpr:ZPR_3658 pyruvate dehydrogenase E1 component subunit beta; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: Pyruvate dehydrogenase (acetyl-transferring); SMART: Transketolase-like, pyrimidine-binding domain; SPTR: Pyruvate dehydrogenase E1 component; pyruvate dehydrogenase (acetyl-transferring) 2138916..2139896 Muricauda ruestringensis DSM 13258 11054776 YP_004788405.1 CDS Murru_1944 NC_015945.1 2140050 2142545 D KEGG: fbc:FB2170_17246 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2140050..2142545 Muricauda ruestringensis DSM 13258 11054777 YP_004788406.1 CDS Murru_1945 NC_015945.1 2142784 2143311 D PFAM: Inorganic pyrophosphatase; COGs: COG0221 Inorganic pyrophosphatase; HAMAP: Inorganic pyrophosphatase; InterPro IPR008162; KEGG: fbc:FB2170_17241 inorganic pyrophosphatase; PFAM: Inorganic pyrophosphatase; PRIAM: Inorganic diphosphatase; SPTR: Inorganic pyrophosphatase; inorganic pyrophosphatase 2142784..2143311 Muricauda ruestringensis DSM 13258 11054778 YP_004788407.1 CDS Murru_1946 NC_015945.1 2143428 2145830 D PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase; COGs: COG3808 Inorganic pyrophosphatase; HAMAP: Pyrophosphate-energised proton pump; InterPro IPR004131; KEGG: rbi:RB2501_03175 membrane-bound proton-translocating pyrophosphatase; PFAM: Pyrophosphate-energised proton pump; PRIAM: Inorganic diphosphatase; SPTR: Inorganic H+ pyrophosphatase; TIGRFAM: Pyrophosphate-energised proton pump; pyrophosphate-energized proton pump 2143428..2145830 Muricauda ruestringensis DSM 13258 11054779 YP_004788408.1 CDS Murru_1947 NC_015945.1 2145915 2146631 R PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR006260; KEGG: fbc:FB2170_03005 TonB; PFAM: TonB, C-terminal; SPTR: TonB; TIGRFAM: TonB, C-terminal; TonB family protein complement(2145915..2146631) Muricauda ruestringensis DSM 13258 11054780 YP_004788409.1 CDS Murru_1948 NC_015945.1 2146773 2148050 R PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: rbi:RB2501_00846 hypothetical protein; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase complement(2146773..2148050) Muricauda ruestringensis DSM 13258 11054781 YP_004788410.1 CDS Murru_1949 NC_015945.1 2148152 2148769 R PFAM: Deoxynucleoside kinase; COGs: COG1428 Deoxynucleoside kinase; InterPro IPR001977:IPR002624; KEGG: fbc:FB2170_17221 deoxynucleoside kinase subfamily; PFAM: Deoxynucleoside kinase; Dephospho-CoA kinase; PRIAM: Deoxyadenosine kinase; SPTR: Deoxynucleoside kinase subfamily, putative; deoxyadenosine kinase complement(2148152..2148769) Muricauda ruestringensis DSM 13258 11054782 YP_004788411.1 CDS Murru_1950 NC_015945.1 2149096 2150349 D PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, N-terminal domain; S-adenosylmethionine synthetase, central domain; TIGRFAM: S-adenosylmethionine synthetase; COGs: COG0192 S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthetase; InterPro IPR002133:IPR022628:IPR022629:IPR022630; KEGG: fbc:FB2170_17206 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase, C-terminal; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal; PRIAM: Methionine adenosyltransferase; SPTR: S-adenosylmethionine synthase; TIGRFAM: S-adenosylmethionine synthetase; S-adenosylmethionine synthase 2149096..2150349 Muricauda ruestringensis DSM 13258 11054783 YP_004788412.1 CDS Murru_1951 NC_015945.1 2150357 2150473 R hypothetical protein complement(2150357..2150473) Muricauda ruestringensis DSM 13258 11054784 YP_004788413.1 CDS Murru_1952 NC_015945.1 2150553 2152487 D PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: putative hydrolase, CocE/NonD family; COGs: COG2936 acyl esterase; InterPro IPR005674:IPR000383:IPR013736; KEGG: cat:CA2559_08881 alpha-amino acid ester hydrolase; SMART: Peptidase S15/CocE/NonD, C-terminal; SPTR: X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: CocE/NonD hydrolase; hydrolase 2150553..2152487 Muricauda ruestringensis DSM 13258 11054785 YP_004788414.1 CDS Murru_1953 NC_015945.1 2152817 2154091 D PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase; COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterPro IPR006235:IPR000277; KEGG: fps:FP0257 O-acetylhomoserine aminocarboxypropyltransferase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cysteine synthase; SPTR: Probable O-acetylhomoserine aminocarboxypropyltransferase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; O-acetylhomoserine/O-acetylserine sulfhydrylase 2152817..2154091 Muricauda ruestringensis DSM 13258 11054786 YP_004788415.1 CDS Murru_1954 NC_015945.1 2154120 2157500 D PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; Amino acid kinase family; alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase; aspartate kinase; COGs: COG0527 Aspartokinase; InterProIPR001341:IPR000073:IPR001048:IPR005106:IPR 001342; KEGG: fbc:FB2170_17196 bifunctional aspartokinase I/homoserine dehydrogenase I; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/glutamate/uridylate kinase; Alpha/beta hydrolase fold-1; Aspartate/homoserine dehydrogenase, NAD-binding; PRIAM: Aspartate kinase., Homoserine dehydrogenase; SPTR: Bifunctional aspartokinase I/homoserine dehydrogenase I; TIGRFAM: Aspartate kinase domain; aspartate kinase 2154120..2157500 Muricauda ruestringensis DSM 13258 11054787 YP_004788416.1 CDS Murru_1955 NC_015945.1 2157576 2158742 D PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: O-succinylhomoserine sulfhydrylase; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: fbc:FB2170_17191 O-succinylhomoserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Methionine gamma-lyase; SPTR: O-succinylhomoserine sulfhydrylase; methionine gamma-lyase 2157576..2158742 Muricauda ruestringensis DSM 13258 11054788 YP_004788417.1 CDS Murru_1956 NC_015945.1 2158798 2159205 D PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: fbc:FB2170_17186 BadM/Rrf2 family transcriptional regulator; PFAM: Transcription regulator Rrf2; SPTR: Transcriptional regulator, BadM/Rrf2 family protein; TIGRFAM: Transcription regulator Rrf2; BadM/Rrf2 family transcriptional regulator 2158798..2159205 Muricauda ruestringensis DSM 13258 11054789 YP_004788418.1 CDS Murru_1957 NC_015945.1 2159384 2159647 D PFAM: Predicted membrane protein (DUF2061); InterPro IPR018638; KEGG: fbc:FB2170_17181 hypothetical protein; PFAM: Protein of unknown function DUF2061, membrane; SPTR: Putative uncharacterized protein; hypothetical protein 2159384..2159647 Muricauda ruestringensis DSM 13258 11054790 YP_004788419.1 CDS Murru_1958 NC_015945.1 2159659 2160282 D PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: phosophoadenylyl-sulfate reductase (thioredoxin); COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR002500; KEGG: fbc:FB2170_17176 putative 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase; PFAM: Phosphoadenosine phosphosulphate reductase; SPTR: Possible 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase; phosphoadenosine phosphosulfate reductase 2159659..2160282 Muricauda ruestringensis DSM 13258 11054791 YP_004788420.1 CDS Murru_1959 NC_015945.1 2160337 2161284 D PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit; COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR011784:IPR002500; KEGG: fbc:FB2170_17171 sulfate adenylyltransferase subunit 2; PFAM: Phosphoadenosine phosphosulphate reductase; PRIAM: Sulfate adenylyltransferase; SPTR: Sulfate adenylyltransferase subunit 2; TIGRFAM: Sulphate adenylyltransferase, small subunit; sulfate adenylyltransferase 2160337..2161284 Muricauda ruestringensis DSM 13258 11054792 YP_004788421.1 CDS Murru_1960 NC_015945.1 2161333 2162580 D PFAM: Elongation factor Tu GTP binding domain; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein domain; COGs: COG2895 GTPase - Sulfate adenylate transferase subunit 1; InterPro IPR011779:IPR000795; KEGG: fbc:FB2170_17166 sulfate adenylyltransferase subunit 1; PFAM: Protein synthesis factor, GTP-binding; PRIAM: Sulfate adenylyltransferase; SPTR: Sulfate adenylyltransferase subunit 1; TIGRFAM: Sulphate adenylyltransferase, large subunit; sulfate adenylyltransferase 2161333..2162580 Muricauda ruestringensis DSM 13258 11054793 YP_004788422.1 CDS Murru_1961 NC_015945.1 2162655 2164745 D PFAM: HEPN domain; Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; COGs: COG0155 Sulfite reductase beta subunit (hemoprotein); InterPro IPR005117:IPR006067:IPR007842; KEGG: fbc:FB2170_17161 putative sulfite reductase; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; HEPN; PRIAM: Ferredoxin--nitrite reductase; SPTR: Probable sulfite reductase; ferredoxin--nitrite reductase 2162655..2164745 Muricauda ruestringensis DSM 13258 11054794 YP_004788423.1 CDS Murru_1962 NC_015945.1 2164738 2165514 D PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR006366:IPR000878; KEGG: fbc:FB2170_17156 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; PRIAM: Uroporphyrinogen-III C-methyltransferase; SPTR: Uroporphyrin-III C-methyltransferase; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; uroporphyrin-III C-methyltransferase 2164738..2165514 Muricauda ruestringensis DSM 13258 11054795 YP_004788424.1 CDS Murru_1963 NC_015945.1 2165588 2166649 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG0492 Thioredoxin reductase; HAMAP: Ferredoxin--NADP reductase, type 2; InterPro IPR013027:IPR022890; KEGG: rbi:RB2501_03115 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Ferredoxin--NADP(+) reductase; SPTR: Thioredoxin reductase; ferredoxin--NADP reductase 2165588..2166649 Muricauda ruestringensis DSM 13258 11054796 YP_004788425.1 CDS Murru_1964 NC_015945.1 2166737 2167654 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: fjo:Fjoh_4278 helix-turn-helix domain-containing protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family; AraC family transcriptional regulator 2166737..2167654 Muricauda ruestringensis DSM 13258 11054797 YP_004788426.1 CDS Murru_1965 NC_015945.1 2167898 2168659 D PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: fjo:Fjoh_4280 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Possible oxidoreductase; short-chain dehydrogenase/reductase SDR 2167898..2168659 Muricauda ruestringensis DSM 13258 11054798 YP_004788427.1 CDS Murru_1966 NC_015945.1 2169020 2170021 D PFAM: Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; COGs: COG0646 Methionine synthase I (cobalamin-dependent) methyltransferase domain; InterPro IPR003726; KEGG: fbc:FB2170_17141 5-methyltetrahydrofolate--homocysteine methyltransferase; PFAM: Homocysteine S-methyltransferase; PRIAM: Methionine synthase; SPTR: 5-methyltetrahydrofolate--homocysteine methyltransferase; methionine synthase 2169020..2170021 Muricauda ruestringensis DSM 13258 11054799 YP_004788428.1 CDS Murru_1967 NC_015945.1 2170031 2172787 D PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; COGs: COG1410 Methionine synthase I cobalamin-binding domain; InterProIPR011822:IPR000489:IPR003759:IPR006158:IPR 004223; KEGG: fbc:FB2170_17131 5-methyltetrahydrofolate--homocysteine methyltransferase; PFAM: Vitamin B12-dependent methionine synthase, activation domain; Pterin-binding; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; PRIAM: Methionine synthase; SPTR: 5-methyltetrahydrofolate--homocysteine methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; methionine synthase 2170031..2172787 Muricauda ruestringensis DSM 13258 11054800 YP_004788429.1 CDS Murru_1968 NC_015945.1 2172791 2173744 D PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form; COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR004620:IPR003171; KEGG: fbc:FB2170_17126 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; PRIAM: Methylenetetrahydrofolate reductase (NAD(P)H); SPTR: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; 5,10-methylenetetrahydrofolate reductase 2172791..2173744 Muricauda ruestringensis DSM 13258 11054801 YP_004788430.1 CDS Murru_1969 NC_015945.1 2173915 2175015 D PFAM: Lipid A 3-O-deacylase (PagL); InterPro IPR018550; KEGG: fbc:FB2170_17121 hypothetical protein; PFAM: Lipid A 3-O-deacylase-related; SPTR: Putative uncharacterized protein; lipid A 3-O-deacylase-like protein 2173915..2175015 Muricauda ruestringensis DSM 13258 11054802 YP_004788431.1 CDS Murru_1970 NC_015945.1 2175012 2175815 D PFAM: Protein of unknown function (DUF2807); KEGG: fbc:FB2170_17116 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2175012..2175815 Muricauda ruestringensis DSM 13258 11054803 YP_004788432.1 CDS Murru_1971 NC_015945.1 2175891 2177003 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: fbc:FB2170_17111 FmtA-like protein; PFAM: Beta-lactamase-related; SPTR: FmtA-like protein; manually curated; beta-lactamase 2175891..2177003 Muricauda ruestringensis DSM 13258 11054804 YP_004788433.1 CDS Murru_1972 NC_015945.1 2177000 2178451 R PFAM: Pyridoxal-dependent decarboxylase conserved domain; COGs: COG0076 Glutamate decarboxylase and related PLP-dependent protein; InterPro IPR002129; KEGG: cat:CA2559_04970 decarboxylase, pyridoxal-dependent; PFAM: Pyridoxal phosphate-dependent decarboxylase; PRIAM: Aromatic-L-amino-acid decarboxylase; SPTR: Decarboxylase, pyridoxal-dependent; aromatic-L-amino-acid decarboxylase complement(2177000..2178451) Muricauda ruestringensis DSM 13258 11054805 YP_004788434.1 CDS Murru_1973 NC_015945.1 2178546 2179439 R PFAM: ABC transporter; TIGRFAM: gliding motility-associated ABC transporter ATP-binding subunit GldA; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR019864:IPR003439:IPR003593; KEGG: rbi:RB2501_03070 ABC-type multidrug transport system ATPase; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type multidrug transporter, ATP-binding protein; gliding motility-associated protein; TIGRFAM: Gliding motility-associated ABC transporter ATP-binding subunit GldA; gliding motility-associated ABC transporter ATP-binding subunit GldA complement(2178546..2179439) Muricauda ruestringensis DSM 13258 11054806 YP_004788435.1 CDS Murru_1974 NC_015945.1 2179977 2180807 D PFAM: Prephenate dehydratase; COGs: COG0077 Prephenate dehydratase; InterPro IPR001086; KEGG: fbc:FB2170_17106 putative prefrenate dehydratase; PFAM: Prephenate dehydratase; PRIAM: Prephenate dehydratase; SPTR: Putative prefrenate dehydratase; Prephenate dehydratase 2179977..2180807 Muricauda ruestringensis DSM 13258 11054807 YP_004788436.1 CDS Murru_1975 NC_015945.1 2180807 2181949 D PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: fbc:FB2170_17101 putative aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: LL-diaminopimelate aminotransferase; SPTR: Putative aminotransferase; LL-diaminopimelate aminotransferase 2180807..2181949 Muricauda ruestringensis DSM 13258 11054808 YP_004788437.1 CDS Murru_1976 NC_015945.1 2181953 2182813 D PFAM: Prephenate dehydrogenase; COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099; KEGG: fbc:FB2170_17096 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; PRIAM: Prephenate dehydrogenase; SPTR: Prephenate dehydrogenase; prephenate dehydrogenase 2181953..2182813 Muricauda ruestringensis DSM 13258 11054809 YP_004788438.1 CDS Murru_1977 NC_015945.1 2182822 2183904 D PFAM: Chorismate mutase type II; DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006218:IPR020822:IPR002701; KEGG: rbi:RB2501_03045 putative phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase; PFAM: DAHP synthetase I/KDSA; Chorismate mutase, type II; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SMART: Chorismate mutase; SPTR: Putative phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase; 3-deoxy-7-phosphoheptulonate synthase 2182822..2183904 Muricauda ruestringensis DSM 13258 11054810 YP_004788439.1 CDS Murru_1978 NC_015945.1 2184039 2184713 D PFAM: Protein of unknown function (DUF2807); KEGG: fbc:FB2170_17086 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2184039..2184713 Muricauda ruestringensis DSM 13258 11054811 YP_004788440.1 CDS Murru_1979 NC_015945.1 2184770 2185408 R KEGG: gfo:GFO_0344 secreted protein; SPTR: Secreted protein; hypothetical protein complement(2184770..2185408) Muricauda ruestringensis DSM 13258 11054812 YP_004788441.1 CDS Murru_1980 NC_015945.1 2185569 2186009 R KEGG: rbi:RB2501_03035 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2185569..2186009) Muricauda ruestringensis DSM 13258 11054813 YP_004788442.1 CDS Murru_1981 NC_015945.1 2186104 2187042 D PFAM: Protein of unknown function, DUF258; TIGRFAM: ribosome small subunit-dependent GTPase A; COGs: COG1162 GTPase; HAMAP: Ribosome biogenesis GTPase RsgA, putative; InterPro IPR004881; KEGG: fbc:FB2170_17071 ribosome-associated GTPase; PFAM: Ribosome biogenesis GTPase RsgA, putative; SPTR: Putative ribosome biogenesis GTPase RsgA 2; TIGRFAM: Ribosome biogenesis GTPase RsgA, putative; ribosome biogenesis GTPase RsgA 2186104..2187042 Muricauda ruestringensis DSM 13258 11054814 YP_004788443.1 CDS Murru_1982 NC_015945.1 2187042 2187494 D PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; COGs: COG1490 D-Tyr-tRNAtyr deacylase; HAMAP: D-tyrosyl-tRNA(Tyr) deacylase; InterPro IPR003732; KEGG: fbc:FB2170_17066 D-tyrosyl-tRNA deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; SPTR: D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; D-tyrosyl-tRNA(Tyr) deacylase 2187042..2187494 Muricauda ruestringensis DSM 13258 11054815 YP_004788444.1 CDS Murru_1983 NC_015945.1 2187578 2189479 D PFAM: Transglutaminase-like superfamily; KEGG: fjo:Fjoh_0511 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2187578..2189479 Muricauda ruestringensis DSM 13258 11054816 YP_004788445.1 CDS Murru_1984 NC_015945.1 2189476 2191488 D PFAM: Transglutaminase-like superfamily; InterPro IPR002931; KEGG: fjo:Fjoh_0510 hypothetical protein; PFAM: Transglutaminase-like; SPTR: Putative uncharacterized protein; transglutaminase 2189476..2191488 Muricauda ruestringensis DSM 13258 11054817 YP_004788446.1 CDS Murru_1985 NC_015945.1 2191496 2193457 D KEGG: zpr:ZPR_3234 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2191496..2193457 Muricauda ruestringensis DSM 13258 11054818 YP_004788447.1 CDS Murru_1986 NC_015945.1 2193504 2193830 D PFAM: MazG nucleotide pyrophosphohydrolase domain; InterPro IPR004518; KEGG: fps:FP0242 hypothetical protein; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core; SPTR: Putative uncharacterized protein; MazG nucleotide pyrophosphohydrolase 2193504..2193830 Muricauda ruestringensis DSM 13258 11054819 YP_004788448.1 CDS Murru_1987 NC_015945.1 2193900 2195129 D PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase; InterPro IPR001986:IPR006264; KEGG: fbc:FB2170_17056 putative 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: Enolpyruvate transferase domain; PRIAM: 3-phosphoshikimate 1-carboxyvinyltransferase; SPTR: 3-phosphoshikimate 1-carboxyvinyltransferase; 3-phosphoshikimate 1-carboxyvinyltransferase 2193900..2195129 Muricauda ruestringensis DSM 13258 11054820 YP_004788449.1 CDS Murru_1988 NC_015945.1 2195215 2196264 D PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); HAMAP: Queuosine biosynthesis protein; InterPro IPR003699; KEGG: fbc:FB2170_17051 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; SPTR: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: Queuosine biosynthesis protein; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 2195215..2196264 Muricauda ruestringensis DSM 13258 11054821 YP_004788450.1 CDS Murru_1989 NC_015945.1 2196498 2197538 D PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase; COGs: COG0820 Fe-S-cluster redox enzyme; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; InterPro IPR004383:IPR007197:IPR006638; KEGG: fbc:FB2170_17046 radical SAM enzyme, Cfr family protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Ribosomal RNA large subunit methyltransferase N; TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; ribosomal RNA large subunit methyltransferase N 2196498..2197538 Muricauda ruestringensis DSM 13258 11054822 YP_004788451.1 CDS Murru_1990 NC_015945.1 2197718 2198692 D PFAM: Polyprenyl synthetase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: fbc:FB2170_17041 polyprenyl synthetase; PFAM: Polyprenyl synthetase; PRIAM: Trans-hexaprenyltranstransferase; SPTR: Polyprenyl synthetase; manually curated; trans-hexaprenyltranstransferase 2197718..2198692 Muricauda ruestringensis DSM 13258 11054823 YP_004788452.1 CDS Murru_1991 NC_015945.1 2198802 2199377 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: fbc:FB2170_17036 putative ECF family RNA polymerase sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: Putative RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 2198802..2199377 Muricauda ruestringensis DSM 13258 11054824 YP_004788453.1 CDS Murru_1992 NC_015945.1 2199382 2200107 D KEGG: fbc:FB2170_17031 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2199382..2200107 Muricauda ruestringensis DSM 13258 11054825 YP_004788454.1 CDS Murru_1993 NC_015945.1 2200193 2201263 D KEGG: fbc:FB2170_17026 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2200193..2201263 Muricauda ruestringensis DSM 13258 11054826 YP_004788455.1 CDS Murru_1994 NC_015945.1 2201333 2201575 R KEGG: fbc:FB2170_17021 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2201333..2201575) Muricauda ruestringensis DSM 13258 11054827 YP_004788456.1 CDS Murru_1995 NC_015945.1 2201722 2202312 D PFAM: 2OG-Fe(II) oxygenase superfamily; COGs: COG3751 proline hydroxylase; InterPro IPR005123:IPR006620; KEGG: svo:SVI_4108 SM-20 domain-containing protein; PFAM: Oxoglutarate/iron-dependent oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit; SPTR: 2OG-Fe(II) oxygenase; 2OG-Fe(II) oxygenase 2201722..2202312 Muricauda ruestringensis DSM 13258 11054828 YP_004788457.1 CDS Murru_1996 NC_015945.1 2202313 2202621 R KEGG: mtt:Ftrac_2067 phosphoribosylpyrophosphate synthetase; SPTR: Putative uncharacterized protein; phosphoribosylpyrophosphate synthetase complement(2202313..2202621) Muricauda ruestringensis DSM 13258 11054829 YP_004788458.1 CDS Murru_1997 NC_015945.1 2202937 2204760 R PFAM: X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain; X-Pro dipeptidyl-peptidase (S15 family); TIGRFAM: putative hydrolase, CocE/NonD family; COGs: COG2936 acyl esterase; InterPro IPR000383:IPR013736; KEGG: fbc:FB2170_10211 x-prolyl-dipeptidyl aminopeptidase; PRIAM: Xaa-Pro dipeptidyl-peptidase; SMART: Peptidase S15/CocE/NonD, C-terminal; SPTR: X-prolyl-dipeptidyl aminopeptidase; Xaa-Pro dipeptidyl-peptidase complement(2202937..2204760) Muricauda ruestringensis DSM 13258 11054830 YP_004788459.1 CDS Murru_1998 NC_015945.1 2204986 2206959 D PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; DnaB-helicase binding domain of primase; TIGRFAM: DNA primase, catalytic core; COGs: COG0358 DNA primase; InterPro IPR006295:IPR002694:IPR013264:IPR006171; KEGG: fbc:FB2170_17016 putative DNA primase; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; Toprim domain; SPTR: Putative DNA primase; TIGRFAM: DNA primase, DnaG; DNA primase 2204986..2206959 Muricauda ruestringensis DSM 13258 11054831 YP_004788460.1 CDS Murru_1999 NC_015945.1 2207027 2207656 R PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: fbc:FB2170_17011 two component transcriptional regulator, LuxR family protein; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SPTR: Two component transcriptional regulator, LuxR family protein; two component LuxR family transcriptional regulator complement(2207027..2207656) Muricauda ruestringensis DSM 13258 11054832 YP_004788461.1 CDS Murru_2000 NC_015945.1 2207815 2208603 R PFAM: NAD synthase; TIGRFAM: NAD+ synthetase; COGs: COG0171 NAD synthase; InterPro IPR003694:IPR022310; KEGG: rbi:RB2501_02950 putative NH(3)-dependent NAD synthetase; PFAM: NAD/GMP synthase; SPTR: NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD synthase; NAD+ synthetase complement(2207815..2208603) Muricauda ruestringensis DSM 13258 11054833 YP_004788462.1 CDS Murru_2001 NC_015945.1 2208634 2209656 D TIGRFAM: gliding motility-associated lipoprotein GldB; InterPro IPR019853; KEGG: fbc:FB2170_17001 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Gliding motility-associated lipoprotein, GldB; gliding motility-associated lipoprotein GldB 2208634..2209656 Muricauda ruestringensis DSM 13258 11054834 YP_004788463.1 CDS Murru_2002 NC_015945.1 2209660 2209995 D TIGRFAM: gliding motility-associated protein GldC; InterPro IPR019854; KEGG: fbc:FB2170_16996 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Gliding motility-associated protein, GldC; gliding motility-associated protein GldC 2209660..2209995 Muricauda ruestringensis DSM 13258 11054835 YP_004788464.1 CDS Murru_2003 NC_015945.1 2210162 2210659 R SPTR: Putative uncharacterized protein; hypothetical protein complement(2210162..2210659) Muricauda ruestringensis DSM 13258 11054836 YP_004788465.1 CDS Murru_2004 NC_015945.1 2210916 2211644 R PFAM: Pirin; COGs: COG1741 Pirin-related protein; InterPro IPR003829; KEGG: fba:FIC_00549 possible pirin family protein; PFAM: Pirin, N-terminal; SPTR: Putative Pirin family proteins; Pirin domain-containing protein complement(2210916..2211644) Muricauda ruestringensis DSM 13258 11054837 YP_004788466.1 CDS Murru_2005 NC_015945.1 2211749 2212363 R PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; COGs: COG0218 GTPase; HAMAP: GTP-binding protein, ribosome biogenesis, YsxC; InterPro IPR019987:IPR002917; KEGG: fbc:FB2170_16976 putative GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; SPTR: Probable GTP-binding protein engB; TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC; GTP-binding protein engB complement(2211749..2212363) Muricauda ruestringensis DSM 13258 11054838 YP_004788467.1 CDS Murru_2006 NC_015945.1 2212366 2213130 R PFAM: alpha/beta hydrolase fold; COGs: COG0596 hydrolase or acyltransferase (alpha/beta hydrolase superfamily); InterPro IPR000073; KEGG: rbi:RB2501_02910 beta-D-galactosidase; PFAM: Alpha/beta hydrolase fold-1; SPTR: Beta-D-galactosidase, putative; alpha/beta hydrolase fold protein complement(2212366..2213130) Muricauda ruestringensis DSM 13258 11054839 YP_004788468.1 CDS Murru_2007 NC_015945.1 2213395 2213850 D PFAM: MraZ protein; TIGRFAM: mraZ protein; COGs: COG2001 conserved hypothetical protein; HAMAP: MraZ; InterPro IPR003444:IPR020603; KEGG: rbi:RB2501_02900 MraZ protein; PFAM: MraZ domain; SPTR: Protein MraZ; TIGRFAM: MraZ; protein mraZ 2213395..2213850 Muricauda ruestringensis DSM 13258 11054840 YP_004788469.1 CDS Murru_2008 NC_015945.1 2213843 2214745 D PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW; COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW; InterPro IPR002903; KEGG: fbc:FB2170_16956 S-adenosyl-methyltransferase MraW; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; SPTR: Ribosomal RNA small subunit methyltransferase H; TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; ribosomal RNA small subunit methyltransferase H 2213843..2214745 Muricauda ruestringensis DSM 13258 11054841 YP_004788470.1 CDS Murru_2009 NC_015945.1 2214861 2215178 D KEGG: fbc:FB2170_16951 S-adenosyl-methyltransferase MraW; SPTR: S-adenosyl-methyltransferase MraW; S-adenosyl-methyltransferase MraW 2214861..2215178 Muricauda ruestringensis DSM 13258 11054842 YP_004788471.1 CDS Murru_2010 NC_015945.1 2215178 2217187 D PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; PASTA domain; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR001460:IPR005543; KEGG: fbc:FB2170_16946 penicillin-binding protein; PFAM: Penicillin-binding protein, transpeptidase; PASTA; PRIAM: Peptidoglycan glycosyltransferase; SMART: PASTA; SPTR: Penicillin-binding protein; peptidoglycan glycosyltransferase 2215178..2217187 Muricauda ruestringensis DSM 13258 11054843 YP_004788472.1 CDS Murru_2011 NC_015945.1 2217184 2218647 D PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; HAMAP:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-di aminopimelateligase; InterPro IPR005761:IPR000713:IPR013221:IPR004101; KEGG: fbc:FB2170_16941 UDP-N-acetylmuramoylalanyl-D-glutamate--2,6- diaminopimelate ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; PRIAM:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelateligase; SPTR: UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelateligase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 2217184..2218647 Muricauda ruestringensis DSM 13258 11054844 YP_004788473.1 CDS Murru_2012 NC_015945.1 2218711 2219931 D PFAM: Glycosyl transferase family 4; Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; InterPro IPR003524:IPR018480:IPR000715; KEGG: rbi:RB2501_02875 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; SPTR:Phospho-N-acetylmuramoyl-pentapeptide-transfer ase; TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase 2218711..2219931 Muricauda ruestringensis DSM 13258 11054845 YP_004788474.1 CDS Murru_2013 NC_015945.1 2219932 2221266 D PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; COGs: COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase; InterPro IPR005762:IPR013221:IPR004101; KEGG: fbc:FB2170_16931 putative UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: Mur ligase, central; Mur ligase, C-terminal; PRIAM: UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; SPTR: UDP-N-acetylmuramoylalanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; UDP-N-acetylmuramoylalanine--D-glutamate ligase 2219932..2221266 Muricauda ruestringensis DSM 13258 11054846 YP_004788475.1 CDS Murru_2014 NC_015945.1 2221270 2222475 D PFAM: Cell cycle protein; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: fbc:FB2170_16926 putative transmembrane rod-shape determining protein; PFAM: Cell cycle protein; SPTR: Putative transmembrane rod-shape determining protein; cell cycle protein 2221270..2222475 Muricauda ruestringensis DSM 13258 11054847 YP_004788476.1 CDS Murru_2015 NC_015945.1 2222462 2223550 D PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; HAMAP: N-acetylglucosaminyltransferase, MurG; InterPro IPR006009:IPR004276:IPR007235; KEGG: fbc:FB2170_16921 N-acetylglucosaminyl transferase; PFAM: Glycosyl transferase, family 28, C-terminal; Glycosyl transferase, family 28; SPTR:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; TIGRFAM: N-acetylglucosaminyltransferase, MurG; UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-UDP N- acetylglucosamine transferase 2222462..2223550 Muricauda ruestringensis DSM 13258 11054848 YP_004788477.1 CDS Murru_2016 NC_015945.1 2223547 2224896 D PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase; COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; InterPro IPR005758:IPR000713:IPR013221:IPR004101; KEGG: fbc:FB2170_16916 UDP-N-acetylmuramate--L-alanine ligase; PFAM: Mur ligase, C-terminal; Mur ligase, central; Mur ligase, N-terminal; PRIAM: UDP-N-acetylmuramate--L-alanine ligase; SPTR: UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate--L-alanine ligase 2223547..2224896 Muricauda ruestringensis DSM 13258 11054849 YP_004788478.1 CDS Murru_2017 NC_015945.1 2224886 2225605 D KEGG: fbc:FB2170_16911 putative cell division protein; SPTR: Putative cell division protein; putative cell division protein 2224886..2225605 Muricauda ruestringensis DSM 13258 11054850 YP_004788479.1 CDS Murru_2018 NC_015945.1 2225609 2226937 D PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; COGs: COG0849 Actin-like ATPase involved in cell division; InterPro IPR020823:IPR003494; KEGG: fbc:FB2170_16906 cell division protein FtsA; PFAM: Cell division protein FtsA domain; SMART: Cell division protein FtsA domain; SPTR: Cell division protein FtsA; TIGRFAM: Cell division protein family FtsA; cell division protein FtsA 2225609..2226937 Muricauda ruestringensis DSM 13258 11054851 YP_004788480.1 CDS Murru_2019 NC_015945.1 2226965 2228968 D PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ; COGs: COG0206 Cell division GTPase; InterPro IPR000158:IPR003008:IPR018316; KEGG: fbc:FB2170_16901 cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; SMART: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; SPTR: Cell division protein ftsZ; TIGRFAM: Cell division protein FtsZ, N-terminal; cell division protein FtsZ 2226965..2228968 Muricauda ruestringensis DSM 13258 11054852 YP_004788481.1 CDS Murru_2020 NC_015945.1 2229069 2229521 D PFAM: Yqey-like protein; COGs: COG1610 conserved hypothetical protein; InterPro IPR019004; KEGG: fbc:FB2170_16896 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2229069..2229521 Muricauda ruestringensis DSM 13258 11054853 YP_004788482.1 CDS Murru_2021 NC_015945.1 2229666 2230199 R PFAM: RibD C-terminal domain; COGs: COG0262 Dihydrofolate reductase; InterPro IPR002734; KEGG: scl:sce1370 dihydrofolate reductase family protein; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; SPTR: Riboflavin biosynthesis protein RibD; bifunctional deaminase-reductase domain-containing protein complement(2229666..2230199) Muricauda ruestringensis DSM 13258 11054855 YP_004788483.1 CDS Murru_2022 NC_015945.1 2230207 2230602 R KEGG: hoh:Hoch_1634 hypothetical protein; SPTR: Conserved uncharacterized protein; hypothetical protein complement(2230207..2230602) Muricauda ruestringensis DSM 13258 11054856 YP_004788484.1 CDS Murru_2023 NC_015945.1 2230631 2231164 R KEGG: fbc:FB2170_14273 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2230631..2231164) Muricauda ruestringensis DSM 13258 11054857 YP_004788485.1 CDS Murru_2024 NC_015945.1 2231221 2231757 R PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: fps:FP0009 cAMP-binding protein; PFAM: Cyclic nucleotide-binding domain; SPTR: Probable cAMP-binding protein; putative Crp/Fnr family transcriptional regulator complement(2231221..2231757) Muricauda ruestringensis DSM 13258 11054858 YP_004788486.1 CDS Murru_2025 NC_015945.1 2231795 2232346 R KEGG: apb:SAR116_0491 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2231795..2232346) Muricauda ruestringensis DSM 13258 11054859 YP_004788487.1 CDS Murru_2026 NC_015945.1 2232771 2233349 R KEGG: cpi:Cpin_2200 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2232771..2233349) Muricauda ruestringensis DSM 13258 11054860 YP_004788488.1 CDS Murru_2027 NC_015945.1 2233640 2234242 R KEGG: fjo:Fjoh_1346 hypothetical protein; SPTR: Hypothetical lipoprotein; hypothetical protein complement(2233640..2234242) Muricauda ruestringensis DSM 13258 11054861 YP_004788489.1 CDS Murru_2028 NC_015945.1 2234652 2235101 D KEGG: cat:CA2559_01845 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2234652..2235101 Muricauda ruestringensis DSM 13258 11054862 YP_004788490.1 CDS Murru_2029 NC_015945.1 2235162 2235647 D KEGG: fps:FP0701 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2235162..2235647 Muricauda ruestringensis DSM 13258 11054863 YP_004788491.1 CDS Murru_2030 NC_015945.1 2235635 2236351 D PFAM: Protein of unknown function (DUF833); KEGG: fps:FP0700 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2235635..2236351 Muricauda ruestringensis DSM 13258 11054864 YP_004788492.1 CDS Murru_2031 NC_015945.1 2236357 2237397 D KEGG: fps:FP0699 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2236357..2237397 Muricauda ruestringensis DSM 13258 11054865 YP_004788493.1 CDS Murru_2032 NC_015945.1 2237405 2237878 R PFAM: Glutathione peroxidase; COGs: COG0386 Glutathione peroxidase; InterPro IPR000889; KEGG: mtt:Ftrac_0469 peroxiredoxin; PFAM: Glutathione peroxidase; PRIAM: Peroxiredoxin; SPTR: Glutathione peroxidase; peroxiredoxin complement(2237405..2237878) Muricauda ruestringensis DSM 13258 11054866 YP_004788494.1 CDS Murru_2033 NC_015945.1 2237881 2238309 R KEGG: mtt:Ftrac_0470 hypothetical protein; SPTR: Membrane protein; hypothetical protein complement(2237881..2238309) Muricauda ruestringensis DSM 13258 11054867 YP_004788495.1 CDS Murru_2034 NC_015945.1 2238392 2239378 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: putative bacillithiol system thiol disulfide oxidoreductase, YpdA family; COGs: COG0492 Thioredoxin reductase; InterPro IPR013027; KEGG: rbi:RB2501_02750 pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Pyridine nucleotide-disulphide oxidoreductase, putative; FAD-dependent pyridine nucleotide-disulfide oxidoreductase complement(2238392..2239378) Muricauda ruestringensis DSM 13258 11054868 YP_004788496.1 CDS Murru_2035 NC_015945.1 2239378 2240037 R PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: fbc:FB2170_16851 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Ribulose-phosphate 3-epimerase; TIGRFAM: Ribulose-phosphate 3-epimerase; ribulose-phosphate 3-epimerase complement(2239378..2240037) Muricauda ruestringensis DSM 13258 11054869 YP_004788497.1 CDS Murru_2036 NC_015945.1 2240225 2241088 R PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR014284:IPR009042:IPR007627:IPR007624:IPR 007630; KEGG: rbi:RB2501_02735 putative sigma factor A; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 3; SPTR: Putative sigma factor A; TIGRFAM: RNA polymerase sigma-70; RpoD subfamily RNA polymerase sigma-70 subunit complement(2240225..2241088) Muricauda ruestringensis DSM 13258 11054870 YP_004788498.1 CDS Murru_2037 NC_015945.1 2241413 2243644 R PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase; COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); HAMAP: Polyribonucleotide nucleotidyltransferase; InterProIPR012162:IPR001247:IPR015847:IPR015848:IPR 018111:IPR003029:IPR004087:IPR022967; KEGG: cat:CA2559_12288 putative polyribonucleotide nucleotidyltransferase; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA-binding domain; PRIAM: Polyribonucleotide nucleotidyltransferase; SMART: RNA-binding domain, S1; K Homology; SPTR: Polyribonucleotide nucleotidyltransferase; TIGRFAM: Polyribonucleotide nucleotidyltransferase; polyribonucleotide nucleotidyltransferase complement(2241413..2243644) Muricauda ruestringensis DSM 13258 11054871 YP_004788499.1 CDS Murru_2038 NC_015945.1 2243867 2244136 R PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle; COGs: COG0184 Ribosomal protein S15P/S13E; InterPro IPR005290:IPR000589; KEGG: fbc:FB2170_16806 putative 30S ribosomal protein S15; PFAM: Ribosomal protein S15; SPTR: 30S ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; 30S ribosomal protein S15 complement(2243867..2244136) Muricauda ruestringensis DSM 13258 11054872 YP_004788500.1 CDS Murru_2039 NC_015945.1 2244454 2245314 R PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; COGs: COG0777 Acetyl-CoA carboxylase beta subunit; HAMAP: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; InterPro IPR000438:IPR000022; KEGG: fbc:FB2170_16796 acetyl-CoA carboxylase, carboxyl transferase subunit beta; PFAM: Carboxyl transferase; PRIAM: Acetyl-CoA carboxylase; SPTR: Acetyl-CoA carboxylase, carboxyl transferase subunit beta; TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta complement(2244454..2245314) Muricauda ruestringensis DSM 13258 11054873 YP_004788501.1 CDS Murru_2040 NC_015945.1 2245342 2246409 R PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-bisphosphate aldolase, class II, yeast/E. coli subtype; COGs: COG0191 Fructose/tagatose bisphosphate aldolase; InterPro IPR006411:IPR000771; KEGG: fbc:FB2170_16791 fructose-bisphosphate aldolase; PFAM: Ketose-bisphosphate aldolase, class-II; PRIAM: Fructose-bisphosphate aldolase; SPTR: Fructose-bisphosphate aldolase; TIGRFAM: Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype; Ketose-bisphosphate aldolase, class-II; fructose-bisphosphate aldolase complement(2245342..2246409) Muricauda ruestringensis DSM 13258 11054874 YP_004788502.1 CDS Murru_2041 NC_015945.1 2246462 2249050 R PFAM: Surface antigen; COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR000184; KEGG: rbi:RB2501_02705 hypothetical protein; PFAM: Bacterial surface antigen (D15); SPTR: Putative uncharacterized protein; surface antigen (D15) complement(2246462..2249050) Muricauda ruestringensis DSM 13258 11054875 YP_004788503.1 CDS Murru_2042 NC_015945.1 2249075 2249791 D PFAM: SpoU rRNA Methylase family; COGs: COG0566 rRNA methylase; InterPro IPR013123:IPR001537; KEGG: fbc:FB2170_16781 putative tRNA/rRNA methyltransferase; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SPTR: Putative tRNA/rRNA methyltransferase; tRNA/rRNA methyltransferase SpoU 2249075..2249791 Muricauda ruestringensis DSM 13258 11054876 YP_004788504.1 CDS Murru_2043 NC_015945.1 2250112 2250804 R KEGG: rbi:RB2501_02695 PorT protein; SPTR: PorT protein; PorT protein complement(2250112..2250804) Muricauda ruestringensis DSM 13258 11054877 YP_004788505.1 CDS Murru_2044 NC_015945.1 2250809 2251537 R PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; HAMAP: UbiE/COQ5 methyltransferase; InterPro IPR004033; KEGG: fbc:FB2170_16771 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; SPTR: Menaquinone biosynthesis methyltransferase ubiE; TIGRFAM: UbiE/COQ5 methyltransferase; ubiquinone/menaquinone biosynthesis methyltransferase ubiE complement(2250809..2251537) Muricauda ruestringensis DSM 13258 11054878 YP_004788506.1 CDS Murru_2045 NC_015945.1 2251732 2253081 D PFAM: TrkA-N domain; TrkA-C domain; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148:IPR006037; KEGG: rbi:RB2501_02685 potassium transporter peripheral membrane component; PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; SPTR: Putative potassium uptake protein; TrkA-N domain-containing protein 2251732..2253081 Muricauda ruestringensis DSM 13258 11054879 YP_004788507.1 CDS Murru_2046 NC_015945.1 2253081 2254571 D PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445; KEGG: rbi:RB2501_02680 trk system K+ uptake protein TrkH; PFAM: Cation transporter; SPTR: Trk system K+ uptake protein TrkH; cation transporter 2253081..2254571 Muricauda ruestringensis DSM 13258 11054880 YP_004788508.1 CDS Murru_2047 NC_015945.1 2254662 2255849 R PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: rbi:RB2501_02675 putative aspartate aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: Aspartate transaminase; SPTR: Putative aspartate aminotransferase; aspartate transaminase complement(2254662..2255849) Muricauda ruestringensis DSM 13258 11054881 YP_004788509.1 CDS Murru_2048 NC_015945.1 2255863 2256966 R PFAM: Fatty acid desaturase; COGs: COG3239 Fatty acid desaturase; InterPro IPR005804; KEGG: fbc:FB2170_16751 linoleoyl-CoA desaturase; PFAM: Fatty acid desaturase, type 1; PRIAM: Linoleoyl-CoA desaturase; SPTR: Linoleoyl-CoA desaturase; Linoleoyl-CoA desaturase complement(2255863..2256966) Muricauda ruestringensis DSM 13258 11054882 YP_004788510.1 CDS Murru_2049 NC_015945.1 2257080 2257718 D PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB; COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division; HAMAP: rRNA small subunit methyltransferase G; InterPro IPR003682; KEGG: fbc:FB2170_16746 glucose-inhibited division protein B; PFAM: rRNA small subunit methyltransferase G; SPTR: Ribosomal RNA small subunit methyltransferase G; TIGRFAM: rRNA small subunit methyltransferase G; ribosomal RNA small subunit methyltransferase G 2257080..2257718 Muricauda ruestringensis DSM 13258 11054883 YP_004788511.1 CDS Murru_2050 NC_015945.1 2257730 2259979 R PFAM: Myotubularin protein; InterPro IPR001440:IPR019734; KEGG: ptm:GSPATT00030916001 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: Chromosome undetermined scaffold_119, whole genome shotgun sequence; hypothetical protein complement(2257730..2259979) Muricauda ruestringensis DSM 13258 11054884 YP_004788512.1 CDS Murru_2051 NC_015945.1 2260188 2260310 R hypothetical protein complement(2260188..2260310) Muricauda ruestringensis DSM 13258 11054885 YP_004788513.1 CDS Murru_2052 NC_015945.1 2260459 2261223 R PFAM: Creatinine amidohydrolase; COGs: COG1402 Uncharacterized protein putative amidase; InterPro IPR003785; KEGG: fbc:FB2170_16431 hypothetical protein; PFAM: Creatininase; SPTR: Putative uncharacterized protein; creatininase complement(2260459..2261223) Muricauda ruestringensis DSM 13258 11054886 YP_004788514.1 CDS Murru_2053 NC_015945.1 2261298 2262926 R PFAM: Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 1; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR005931:IPR015590; KEGG: fbc:FB2170_16741 delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde dehydrogenase domain; PRIAM: 1-pyrroline-5-carboxylate dehydrogenase; SPTR: Delta-1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 1; delta-1-pyrroline-5-carboxylate dehydrogenase complement(2261298..2262926) Muricauda ruestringensis DSM 13258 11054887 YP_004788515.1 CDS Murru_2054 NC_015945.1 2262999 2263385 R PFAM: Protein of unknown function (DUF525); COGs: COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport; InterPro IPR007474; KEGG: rbi:RB2501_02645 ApaG; PFAM: ApaG domain; SPTR: Putative uncharacterized protein; ApaG domain-containing protein complement(2262999..2263385) Muricauda ruestringensis DSM 13258 11054888 YP_004788516.1 CDS Murru_2055 NC_015945.1 2263391 2264590 R PFAM: Protein of unknown function (DUF3667); KEGG: fbc:FB2170_16731 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2263391..2264590) Muricauda ruestringensis DSM 13258 11054889 YP_004788517.1 CDS Murru_2056 NC_015945.1 2264622 2265866 R KEGG: fbc:FB2170_16726 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2264622..2265866) Muricauda ruestringensis DSM 13258 11054890 YP_004788518.1 CDS Murru_2057 NC_015945.1 2266018 2267370 D PFAM: Na(+)-translocating NADH-quinone reductase subunit A (NQRA); NQRA C-terminal domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit; COGs: COG1726 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrA; InterPro IPR008703; KEGG: fbc:FB2170_16721 Na(+)-translocating NADH-quinone reductase subunit A; PFAM: NADH-quinone reductase, Na(+)-translocating, subunit A; SPTR: Na(+)-translocating NADH-quinone reductase subunit A; TIGRFAM: NADH-quinone reductase, Na(+)-translocating, subunit A; NADH:ubiquinone oxidoreductase subunit A 2266018..2267370 Muricauda ruestringensis DSM 13258 11054891 YP_004788519.1 CDS Murru_2058 NC_015945.1 2267378 2268622 D PFAM: NQR2, RnfD, RnfE family; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; COGs: COG1805 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrB; InterPro IPR010966:IPR004338; KEGG: fbc:FB2170_16716 Na(+)-translocating NADH-quinone reductase subunit B; PFAM: NADH-quinone reductase NQR2/RnfD; SPTR: Na(+)-translocating NADH-quinone reductase subunit B; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; NADH:ubiquinone oxidoreductase subunit B 2267378..2268622 Muricauda ruestringensis DSM 13258 11054892 YP_004788520.1 CDS Murru_2059 NC_015945.1 2268625 2269374 D PFAM: FMN-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; COGs: COG2869 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrC; InterPro IPR010204:IPR007329; KEGG: rbi:RB2501_02620 Na(+)-translocating NADH-quinone reductase subunit C; PFAM: FMN-binding; SMART: FMN-binding; SPTR: Na(+)-translocating NADH-quinone reductase subunit C; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; NADH:ubiquinone oxidoreductase subunit C 2268625..2269374 Muricauda ruestringensis DSM 13258 11054893 YP_004788521.1 CDS Murru_2060 NC_015945.1 2269376 2270023 D PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; COGs: COG1347 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrD; InterPro IPR011292:IPR003667; KEGG: rbi:RB2501_02615 Na(+)-translocating NADH-quinone reductase subunit D; PFAM: Electron transport complex, Rnf/Nqr; SPTR: NADH-ubiquinone oxidoreductase; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; NADH:ubiquinone oxidoreductase subunit D 2269376..2270023 Muricauda ruestringensis DSM 13258 11054894 YP_004788522.1 CDS Murru_2061 NC_015945.1 2270035 2270784 D PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; COGs: COG2209 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrE; InterPro IPR010967:IPR003667; KEGG: fbc:FB2170_16701 NADH:ubiquinone oxidoreductase, Na translocating, E subunit; PFAM: Electron transport complex, Rnf/Nqr; SPTR: NADH:ubiquinone oxidoreductase, Na translocating, E subunit; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; NADH:ubiquinone oxidoreductase subunit E 2270035..2270784 Muricauda ruestringensis DSM 13258 11054895 YP_004788523.1 CDS Murru_2062 NC_015945.1 2270788 2272098 D PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit; COGs: COG2871 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrF; InterPro IPR010205:IPR001041:IPR008333:IPR001433; KEGG: fbc:FB2170_16696 Na(+)-translocating NADH-quinone reductase subunit F; PFAM: Oxidoreductase FAD/NAD(P)-binding; Ferredoxin; Oxidoreductase, FAD-binding domain; PRIAM: Ferredoxin--NAD(+) reductase; SPTR: Na(+)-translocating NADH-quinone reductase subunit F; TIGRFAM: NADH-quinone reductase, Na(+)-translocating, F subunit; NADH:ubiquinone oxidoreductase subunit F 2270788..2272098 Muricauda ruestringensis DSM 13258 11054896 YP_004788524.1 CDS Murru_2063 NC_015945.1 2272186 2272545 D KEGG: rbi:RB2501_02600 Na(+)-translocating NADH-quinone reductase subunit F; SPTR: Na(+)-translocating NADH-quinone reductase subunit F; Na(+)-translocating NADH-quinone reductase subunit F 2272186..2272545 Muricauda ruestringensis DSM 13258 11054897 YP_004788525.1 CDS Murru_2064 NC_015945.1 2272546 2273742 D PFAM: ApbE family; COGs: COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; InterPro IPR003374; KEGG: fbc:FB2170_16686 thiamine biosynthesis lipoprotein ApbE; PFAM: Thiamine synthesis ApbE/UPF0280; SPTR: Thiamine biosynthesis lipoprotein ApbE; ApbE family lipoprotein 2272546..2273742 Muricauda ruestringensis DSM 13258 11054898 YP_004788526.1 CDS Murru_2065 NC_015945.1 2273937 2274824 R PFAM: Methyltransferase domain; InterPro IPR013216; KEGG: fjo:Fjoh_1761 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: SAM-dependent methyltransferase; type 11 methyltransferase complement(2273937..2274824) Muricauda ruestringensis DSM 13258 11054899 YP_004788527.1 CDS Murru_2066 NC_015945.1 2274896 2275714 R PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I; COGs: COG0024 Methionine aminopeptidase; InterPro IPR002467:IPR000994; KEGG: fbc:FB2170_16676 methionine aminopeptidase, type I; PFAM: Peptidase M24, structural domain; PRIAM: Methionyl aminopeptidase; SPTR: Methionine aminopeptidase; TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; methionine aminopeptidase complement(2274896..2275714) Muricauda ruestringensis DSM 13258 11054900 YP_004788528.1 CDS Murru_2067 NC_015945.1 2275923 2277440 R PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; COGs: COG0696 Phosphoglyceromutase; HAMAP: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; InterPro IPR005995:IPR011258:IPR006124; KEGG: rbi:RB2501_02575 phosphoglyceromutase; PFAM: BPG-independent PGAM, N-terminal; Metalloenzyme; PRIAM: Phosphoglycerate mutase; SPTR: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase complement(2275923..2277440) Muricauda ruestringensis DSM 13258 11054901 YP_004788529.1 CDS Murru_2068 NC_015945.1 2277649 2278041 D PFAM: Ankyrin repeat; InterPro IPR002110; KEGG: fbc:FB2170_16666 ankyrin; SPTR: Ankyrin; ankyrin repeat-containing protein 2277649..2278041 Muricauda ruestringensis DSM 13258 11054902 YP_004788530.1 CDS Murru_2069 NC_015945.1 2278145 2278312 R KEGG: fbc:FB2170_16661 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2278145..2278312) Muricauda ruestringensis DSM 13258 11054903 YP_004788531.1 CDS Murru_2070 NC_015945.1 2278433 2279203 R PFAM: Peptidase family M48; COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR001915; KEGG: fbc:FB2170_16656 hypothetical protein; PFAM: Peptidase M48; SPTR: Putative uncharacterized protein; peptidase M48 Ste24p complement(2278433..2279203) Muricauda ruestringensis DSM 13258 11054904 YP_004788532.1 CDS Murru_2071 NC_015945.1 2279243 2279974 R PFAM: D-alanyl-D-alanine carboxypeptidase; COGs: COG1876 D-alanyl-D-alanine carboxypeptidase; InterPro IPR003709; KEGG: fbc:FB2170_16651 D-alanyl-D-alanine carboxypeptidase family protein; PFAM: Peptidase M15B/M15C, D,D-carboxypeptidase VanY/endolysins; SPTR: D-alanyl-D-alanine carboxypeptidase family protein; peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin complement(2279243..2279974) Muricauda ruestringensis DSM 13258 11054905 YP_004788533.1 CDS Murru_2072 NC_015945.1 2280473 2281639 R KEGG: fbc:FB2170_16621 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2280473..2281639) Muricauda ruestringensis DSM 13258 11054906 YP_004788534.1 CDS Murru_2073 NC_015945.1 2281639 2283369 R KEGG: rbi:RB2501_02535 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2281639..2283369) Muricauda ruestringensis DSM 13258 11054907 YP_004788535.1 CDS Murru_2074 NC_015945.1 2283594 2284334 D KEGG: fbc:FB2170_16611 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2283594..2284334 Muricauda ruestringensis DSM 13258 11054908 YP_004788536.1 CDS Murru_2075 NC_015945.1 2284331 2285125 D KEGG: fbc:FB2170_16606 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2284331..2285125 Muricauda ruestringensis DSM 13258 11054909 YP_004788537.1 CDS Murru_2076 NC_015945.1 2285559 2286077 D KEGG: fbc:FB2170_16596 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2285559..2286077 Muricauda ruestringensis DSM 13258 11054910 YP_004788538.1 CDS Murru_2077 NC_015945.1 2286138 2288456 D COGs: COG0308 Aminopeptidase N; KEGG: rbi:RB2501_02515 Zn-dependent aminopeptidase; SPTR: Zn-dependent aminopeptidase; Zn-dependent aminopeptidase 2286138..2288456 Muricauda ruestringensis DSM 13258 11054911 YP_004788539.1 CDS Murru_2078 NC_015945.1 2288467 2288811 D PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; InterPro IPR003369; KEGG: rbi:RB2501_02510 hypothetical protein; PFAM: Bacterial sec-independent translocation protein MttA/Hcf106; SPTR: Putative uncharacterized protein; sec-independent translocation protein mttA/Hcf106 2288467..2288811 Muricauda ruestringensis DSM 13258 11054912 YP_004788540.1 CDS Murru_2079 NC_015945.1 2288818 2289390 D PFAM: PAP2 superfamily; InterPro IPR000326; KEGG: fbc:FB2170_16581 PAP2 superfamily protein; PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: PAP2 superfamily protein; phosphoesterase PA-phosphatase-like protein 2288818..2289390 Muricauda ruestringensis DSM 13258 11054913 YP_004788541.1 CDS Murru_2080 NC_015945.1 2289356 2289997 R PFAM: O-methyltransferase; COGs: COG4122 O-methyltransferase; InterPro IPR002935; KEGG: fbc:FB2170_16576 O-methyltransferase family protein; PFAM: O-methyltransferase, family 3; PRIAM: Caffeoyl-CoA O-methyltransferase; SPTR: O-methyltransferase family protein; caffeoyl-CoA O-methyltransferase complement(2289356..2289997) Muricauda ruestringensis DSM 13258 11054914 YP_004788542.1 CDS Murru_2081 NC_015945.1 2290225 2290689 D PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: fbc:FB2170_16571 putative acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Predicted acetyltransferase; N-acetyltransferase GCN5 2290225..2290689 Muricauda ruestringensis DSM 13258 11054915 YP_004788543.1 CDS Murru_2082 NC_015945.1 2291068 2292336 D PFAM: Aminotransferase class-V; TIGRFAM: kynureninase; COGs: COG3844 Kynureninase; InterPro IPR010111; KEGG: fbc:FB2170_16566 kynureninase; PRIAM: Kynureninase; SPTR: Kynureninase; TIGRFAM: Kynureninase; kynureninase 2291068..2292336 Muricauda ruestringensis DSM 13258 11054916 YP_004788544.1 CDS Murru_2083 NC_015945.1 2292378 2293526 D PFAM: Major Facilitator Superfamily; COGs: COG0738 Fucose permease; InterPro IPR011701; KEGG: fbc:FB2170_16556 putative transport protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Putative transport protein; major facilitator superfamily protein 2292378..2293526 Muricauda ruestringensis DSM 13258 11054917 YP_004788545.1 CDS Murru_2084 NC_015945.1 2293597 2294043 R KEGG: zpr:ZPR_4594 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2293597..2294043) Muricauda ruestringensis DSM 13258 11054918 YP_004788546.1 CDS Murru_2085 NC_015945.1 2294219 2294899 R KEGG: fbc:FB2170_16551 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2294219..2294899) Muricauda ruestringensis DSM 13258 11054919 YP_004788547.1 CDS Murru_2086 NC_015945.1 2294986 2295615 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: sli:Slin_4745 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: ECF sigma factor SigX; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 2294986..2295615 Muricauda ruestringensis DSM 13258 11054920 YP_004788548.1 CDS Murru_2087 NC_015945.1 2295616 2295807 D SPTR: Putative uncharacterized protein; hypothetical protein 2295616..2295807 Muricauda ruestringensis DSM 13258 11054921 YP_004788549.1 CDS Murru_2088 NC_015945.1 2295834 2296661 D PFAM: Mechanosensitive ion channel; Conserved TM helix; InterPro IPR008910; KEGG: sli:Slin_4747 TM helix repeat-containing protein; PFAM: Conserved TM helix; SPTR: Putative cytoplasmic membrane protein; TM helix repeat-containing protein 2295834..2296661 Muricauda ruestringensis DSM 13258 11054922 YP_004788550.1 CDS Murru_2089 NC_015945.1 2296738 2297286 D PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; COGs: COG0740 Protease subunit of ATP-dependent Clp protease; HAMAP: Peptidase S14, ClpP; InterPro IPR001907; KEGG: fbc:FB2170_16546 protease subunit of ATP-dependent Clp protease; PFAM: Peptidase S14, ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit 2; ATP-dependent Clp protease proteolytic subunit 2296738..2297286 Muricauda ruestringensis DSM 13258 11054923 YP_004788551.1 CDS Murru_2090 NC_015945.1 2297563 2298921 D PFAM: FAD binding domain; COGs: COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductase; InterPro IPR006076; KEGG: fbc:FB2170_16541 monooxygenase family protein; PFAM: FAD dependent oxidoreductase; PRIAM: Kynurenine 3-monooxygenase; SPTR: Monooxygenase family protein; kynurenine 3-monooxygenase 2297563..2298921 Muricauda ruestringensis DSM 13258 11054924 YP_004788552.1 CDS Murru_2091 NC_015945.1 2299562 2300341 R PFAM: Putative zinc ribbon domain; COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: fbc:FB2170_16536 hypothetical protein; PFAM: Protein of unknown function DUF164; SPTR: Putative uncharacterized protein; hypothetical protein complement(2299562..2300341) Muricauda ruestringensis DSM 13258 11054925 YP_004788553.1 CDS Murru_2092 NC_015945.1 2300347 2301441 R PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family; COGs: COG0327 conserved hypothetical protein; InterPro IPR002678; KEGG: fbc:FB2170_16531 hypothetical protein; PFAM: NGG1p interacting factor 3, NIF3; SPTR: Putative uncharacterized protein; TIGRFAM: NGG1p interacting factor 3, NIF3; NGG1p interacting factor 3 protein, NIF3 complement(2300347..2301441) Muricauda ruestringensis DSM 13258 11054926 YP_004788554.1 CDS Murru_2093 NC_015945.1 2301490 2302488 D PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; COGs: COG1663 Tetraacyldisaccharide-1-P 4'-kinase; HAMAP: Tetraacyldisaccharide 4'-kinase; InterPro IPR003758; KEGG: fbc:FB2170_16526 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide 4'-kinase; PRIAM: Tetraacyldisaccharide 4'-kinase; SPTR: Tetraacyldisaccharide 4'-kinase; TIGRFAM: Tetraacyldisaccharide 4'-kinase; tetraacyldisaccharide 4'-kinase 2301490..2302488 Muricauda ruestringensis DSM 13258 11054927 YP_004788555.1 CDS Murru_2094 NC_015945.1 2302648 2304870 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR001789; KEGG: fbc:FB2170_16521 multi-sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Multi-sensor hybrid histidine kinase; histidine kinase complement(2302648..2304870) Muricauda ruestringensis DSM 13258 11054928 YP_004788556.1 CDS Murru_2095 NC_015945.1 2304867 2305877 R PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR006424:IPR020828:IPR020829; KEGG: fbc:FB2170_16516 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; SPTR: Glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase complement(2304867..2305877) Muricauda ruestringensis DSM 13258 11054929 YP_004788557.1 CDS Murru_2096 NC_015945.1 2305895 2306770 R PFAM: Radical SAM superfamily; TIGRFAM: lipoate synthase; COGs: COG0320 Lipoate synthase; HAMAP: Lipoate synthase; InterPro IPR003698:IPR007197:IPR006638; KEGG: fbc:FB2170_16511 lipoyl synthase; PFAM: Radical SAM; PRIAM: Lipoyl synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Lipoyl synthase; TIGRFAM: Lipoate synthase; lipoyl synthase complement(2305895..2306770) Muricauda ruestringensis DSM 13258 11054930 YP_004788558.1 CDS Murru_2097 NC_015945.1 2306834 2307394 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: fbc:FB2170_16506 RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(2306834..2307394) Muricauda ruestringensis DSM 13258 11054931 YP_004788559.1 CDS Murru_2098 NC_015945.1 2307425 2307634 R KEGG: fbc:FB2170_16501 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2307425..2307634) Muricauda ruestringensis DSM 13258 11054932 YP_004788560.1 CDS Murru_2099 NC_015945.1 2307711 2308469 R PFAM: Anti-sigma-K factor rskA; KEGG: fbc:FB2170_16496 RNA polymerase sigma-70 factor; SPTR: RNA polymerase sigma-70 factor; RNA polymerase sigma-70 factor complement(2307711..2308469) Muricauda ruestringensis DSM 13258 11054933 YP_004788561.1 CDS Murru_2100 NC_015945.1 2308466 2309032 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: fbc:FB2170_16491 RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(2308466..2309032) Muricauda ruestringensis DSM 13258 11054934 YP_004788562.1 CDS Murru_2101 NC_015945.1 2309236 2310252 R PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; COGs: COG0812 UDP-N-acetylmuramate dehydrogenase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; InterPro IPR003170:IPR006094:IPR011601; KEGG: fbc:FB2170_16481 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; PRIAM: UDP-N-acetylmuramate dehydrogenase; SPTR: UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; UDP-N-acetylenolpyruvoylglucosamine reductase complement(2309236..2310252) Muricauda ruestringensis DSM 13258 11054935 YP_004788563.1 CDS Murru_2102 NC_015945.1 2310252 2311442 R PFAM: Aminotransferase class I and II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: fbc:FB2170_16476 aspartate aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: Aspartate transaminase; SPTR: Aspartate aminotransferase; aspartate transaminase complement(2310252..2311442) Muricauda ruestringensis DSM 13258 11054936 YP_004788564.1 CDS Murru_2103 NC_015945.1 2311590 2312933 D PFAM: PDZ domain (Also known as DHR or GLGF); InterPro IPR001478; KEGG: fbc:FB2170_16471 aspartate aminotransferase; PFAM: PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: Aspartate aminotransferase; PDZ/DHR/GLGF domain-containing protein 2311590..2312933 Muricauda ruestringensis DSM 13258 11054937 YP_004788565.1 CDS Murru_2104 NC_015945.1 2312997 2313383 R PFAM: Protein of unknown function (DUF1573); InterPro IPR011467; KEGG: rbi:RB2501_02385 hypothetical protein; PFAM: Protein of unknown function DUF1573; SPTR: Putative uncharacterized protein; hypothetical protein complement(2312997..2313383) Muricauda ruestringensis DSM 13258 11054938 YP_004788566.1 CDS Murru_2105 NC_015945.1 2313582 2316212 D PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; COGs: COG0525 Valyl-tRNA synthetase; HAMAP: Valyl-tRNA synthetase; InterPro IPR002303:IPR002300:IPR013155:IPR019499; KEGG: fbc:FB2170_16461 putative valyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA-binding arm; PRIAM: Valine--tRNA ligase; SPTR: Putative valyl-tRNA synthetase; TIGRFAM: Valyl-tRNA synthetase; valyl-tRNA synthetase 2313582..2316212 Muricauda ruestringensis DSM 13258 11054939 YP_004788567.1 CDS Murru_2106 NC_015945.1 2316232 2316333 D hypothetical protein 2316232..2316333 Muricauda ruestringensis DSM 13258 11054940 YP_004788568.1 CDS Murru_2107 NC_015945.1 2316317 2317705 D PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: fbc:FB2170_09301 Gfo/Idh/MocA family oxidoreductase; PFAM: Oxidoreductase, N-terminal; PRIAM: Alpha-N-acetylgalactosaminidase; SPTR: Oxidoreductase, Gfo/Idh/MocA family protein; Alpha-N-acetylgalactosaminidase 2316317..2317705 Muricauda ruestringensis DSM 13258 11054941 YP_004788569.1 CDS Murru_2108 NC_015945.1 2317720 2318772 D PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; COGs: COG0153 Galactokinase; InterPro IPR006204:IPR013750; KEGG: lby:Lbys_2575 galactokinase; PFAM: GHMP kinase; GHMP kinase, C-terminal; PRIAM: Galactokinase; SPTR: GHMP kinase; galactokinase 2317720..2318772 Muricauda ruestringensis DSM 13258 11054942 YP_004788570.1 CDS Murru_2109 NC_015945.1 2318772 2319611 D PFAM: Nucleotidyl transferase; KEGG: bfa:Bfae_28250 dTDP-glucose pyrophosphorylase; SPTR: Glucose-1-phosphate thymidylyltransferase; dTDP-glucose pyrophosphorylase 2318772..2319611 Muricauda ruestringensis DSM 13258 11054943 YP_004788571.1 CDS Murru_2110 NC_015945.1 2319664 2320932 D PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: fbc:FB2170_16436 hypothetical protein; PFAM: Fatty acid hydroxylase; SPTR: Putative uncharacterized protein; fatty acid hydroxylase 2319664..2320932 Muricauda ruestringensis DSM 13258 11054944 YP_004788572.1 CDS Murru_2111 NC_015945.1 2320929 2321192 R PFAM: Acyl CoA binding protein; KEGG: fbc:FB2170_16426 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2320929..2321192) Muricauda ruestringensis DSM 13258 11054945 YP_004788573.1 CDS Murru_2112 NC_015945.1 2321185 2321850 R PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor-related protein; COGs: COG0688 Phosphatidylserine decarboxylase; HAMAP: Phosphatidylserine decarboxylase-related protein; InterPro IPR004428:IPR003817; KEGG: fbc:FB2170_16421 phosphatidylserine decarboxylase; PFAM: Phosphatidylserine decarboxylase-related; PRIAM: Phosphatidylserine decarboxylase; SPTR: Phosphatidylserine decarboxylase proenzyme; TIGRFAM: Phosphatidylserine decarboxylase-related protein; phosphatidylserine decarboxylase complement(2321185..2321850) Muricauda ruestringensis DSM 13258 11054946 YP_004788574.1 CDS Murru_2113 NC_015945.1 2321840 2322643 R PFAM: Cytidylyltransferase family; COGs: COG0575 CDP-diglyceride synthetase; InterPro IPR000374; KEGG: fbc:FB2170_16416 phosphatidate cytidylyltransferase; PFAM: Phosphatidate cytidylyltransferase; SPTR: Phosphatidate cytidylyltransferase; phosphatidate cytidylyltransferase complement(2321840..2322643) Muricauda ruestringensis DSM 13258 11054947 YP_004788575.1 CDS Murru_2114 NC_015945.1 2322648 2323256 R PFAM: Uncharacterised ACR, YkgG family COG1556; InterPro IPR003741; KEGG: fbc:FB2170_16411 hypothetical protein; PFAM: Domain of unknown function DUF162; SPTR: Putative uncharacterized protein; lactate utilization protein B/C complement(2322648..2323256) Muricauda ruestringensis DSM 13258 11054948 YP_004788576.1 CDS Murru_2115 NC_015945.1 2323324 2325276 R PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; COGs: COG0465 ATP-dependent Zn protease; InterProIPR005936:IPR011546:IPR003959:IPR000642:IPR 003593; KEGG: fbc:FB2170_16406 putative transmembrane AAA-metalloprotease FtsH; PFAM: ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; Peptidase M41; PRIAM: Microtubule-severing ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative transmembrane AAA-metalloprotease FtsH; TIGRFAM: Peptidase M41, FtsH; ATP-dependent metalloprotease FtsH complement(2323324..2325276) Muricauda ruestringensis DSM 13258 11054949 YP_004788577.1 CDS Murru_2116 NC_015945.1 2325283 2325660 R PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein; COGs: COG0799 Iojap protein; InterPro IPR004394; KEGG: rbi:RB2501_02315 hypothetical protein; PFAM: Ribosome-associated, Iojap-like; SPTR: Putative uncharacterized protein; TIGRFAM: Ribosome-associated, Iojap-like; iojap family protein complement(2325283..2325660) Muricauda ruestringensis DSM 13258 11054950 YP_004788578.1 CDS Murru_2117 NC_015945.1 2325743 2326486 D PFAM: Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR004408:IPR004143; KEGG: fbc:FB2170_16396 putative biotin--(acetyl-CoA carboxylase) synthetase; PFAM: Biotin/lipoate A/B protein ligase; SPTR: Putative biotin--(Acetyl-CoA carboxylase) synthetase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; biotin--acetyl-CoA-carboxylase ligase 2325743..2326486 Muricauda ruestringensis DSM 13258 11054951 YP_004788579.1 CDS Murru_2118 NC_015945.1 2326480 2326878 R KEGG: fbc:FB2170_16391 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2326480..2326878) Muricauda ruestringensis DSM 13258 11054952 YP_004788580.1 CDS Murru_2119 NC_015945.1 2326888 2327526 R PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase; COGs: COG0461 Orotate phosphoribosyltransferase; InterPro IPR004467:IPR000836; KEGG: fbc:FB2170_16386 orotate phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; PRIAM: Orotate phosphoribosyltransferase; SPTR: Orotate phosphoribosyltransferase; TIGRFAM: Orotate phosphoribosyl transferase, clade 1; orotate phosphoribosyltransferase complement(2326888..2327526) Muricauda ruestringensis DSM 13258 11054953 YP_004788581.1 CDS Murru_2120 NC_015945.1 2327534 2328133 D PFAM: NUDIX domain; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086; KEGG: fbc:FB2170_16381 orotate phosphoribosyltransferase; PFAM: NUDIX hydrolase domain; SPTR: Orotate phosphoribosyltransferase; NUDIX hydrolase 2327534..2328133 Muricauda ruestringensis DSM 13258 11054954 YP_004788582.1 CDS Murru_2121 NC_015945.1 2328126 2329898 R PFAM: Zinc carboxypeptidase; InterPro IPR000834; KEGG: gfo:GFO_2688 M14 family peptidase; PFAM: Peptidase M14, carboxypeptidase A; SPTR: Peptidase, family M14; manually curated; peptidase M14 carboxypeptidase A complement(2328126..2329898) Muricauda ruestringensis DSM 13258 11054955 YP_004788583.1 CDS Murru_2122 NC_015945.1 2329967 2330392 R PFAM: Response regulator receiver domain; InterPro IPR001789; KEGG: fbc:FB2170_16376 response regulator; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Response regulator; response regulator receiver complement(2329967..2330392) Muricauda ruestringensis DSM 13258 11054956 YP_004788584.1 CDS Murru_2123 NC_015945.1 2330367 2332193 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR000014:IPR003594:IPR013655:IPR013656; KEGG: rbi:RB2501_02280 histidine kinase sensor protein; PFAM: ATPase-like, ATP-binding domain; PAS fold-4; PAS fold-3; SMART: ATPase-like, ATP-binding domain; PAS; SPTR: Histidine kinase sensor protein; TIGRFAM: PAS; PAS/PAC sensor signal transduction histidine kinase complement(2330367..2332193) Muricauda ruestringensis DSM 13258 11054957 YP_004788585.1 CDS Murru_2124 NC_015945.1 2332385 2332843 R PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain; COGs: COG0669 Phosphopantetheine adenylyltransferase; HAMAP: Coenzyme A biosynthesis protein; InterPro IPR004821:IPR001980:IPR004820; KEGG: fbc:FB2170_16366 phosphopantetheine adenylyltransferase; PFAM: Cytidylyltransferase; PRIAM: Pantetheine-phosphate adenylyltransferase; SPTR: Phosphopantetheine adenylyltransferase; TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; phosphopantetheine adenylyltransferase complement(2332385..2332843) Muricauda ruestringensis DSM 13258 11054958 YP_004788586.1 CDS Murru_2125 NC_015945.1 2332877 2333851 R PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase; COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; HAMAP: D-alanine--D-alanine ligase; InterPro IPR005905:IPR011127:IPR011095; KEGG: fbc:FB2170_16361 D-alanylalanine synthetase; PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; PRIAM: D-alanine--D-alanine ligase; SPTR: D-alanine--D-alanine ligase; TIGRFAM: D-alanine--D-alanine ligase; D-alanine--D-alanine ligase complement(2332877..2333851) Muricauda ruestringensis DSM 13258 11054959 YP_004788587.1 CDS Murru_2126 NC_015945.1 2333931 2334518 D PFAM: PASTA domain; COGs: COG2815 conserved hypothetical protein; InterPro IPR005543; KEGG: fbc:FB2170_16356 hypothetical protein; PFAM: PASTA; SMART: PASTA; SPTR: Putative uncharacterized protein; protein PASTA domain-containing protein 2333931..2334518 Muricauda ruestringensis DSM 13258 11054960 YP_004788588.1 CDS Murru_2127 NC_015945.1 2334521 2335552 D PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR002942:IPR006225:IPR006145; KEGG: fbc:FB2170_16351 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; SMART: RNA-binding S4; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RluC/RluD; RluA family pseudouridine synthase 2334521..2335552 Muricauda ruestringensis DSM 13258 11054961 YP_004788589.1 CDS Murru_2128 NC_015945.1 2335642 2336403 D PFAM: Protein of unknown function (DUF328); COGs: COG3022 conserved hypothetical protein; HAMAP: Uncharacterised protein family UPF0246; InterPro IPR005583; KEGG: fbc:FB2170_16346 hypothetical protein; PFAM: Uncharacterised protein family UPF0246; SPTR: UPF0246 protein FB2170_16346; hypothetical protein 2335642..2336403 Muricauda ruestringensis DSM 13258 11054962 YP_004788590.1 CDS Murru_2129 NC_015945.1 2336579 2339125 D PFAM: Phosphoenolpyruvate carboxylase; COGs: COG2352 Phosphoenolpyruvate carboxylase; InterPro IPR021135; KEGG: fbc:FB2170_16331 phosphoenolpyruvate carboxylase; PFAM: Phosphoenolpyruvate carboxylase; PRIAM: Phosphoenolpyruvate carboxylase; SPTR: Phosphoenolpyruvate carboxylase; phosphoenolpyruvate carboxylase 2336579..2339125 Muricauda ruestringensis DSM 13258 11054963 YP_004788591.1 CDS Murru_2130 NC_015945.1 2339231 2339926 D KEGG: fbc:FB2170_16336 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2339231..2339926 Muricauda ruestringensis DSM 13258 11054964 YP_004788592.1 CDS Murru_2131 NC_015945.1 2339923 2340780 R KEGG: ppn:Palpr_1021 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2339923..2340780) Muricauda ruestringensis DSM 13258 11054965 YP_004788593.1 CDS Murru_2132 NC_015945.1 2340796 2341146 R KEGG: zpr:ZPR_1349 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2340796..2341146) Muricauda ruestringensis DSM 13258 11054966 YP_004788594.1 CDS Murru_2133 NC_015945.1 2341177 2342703 R PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650; KEGG: fbc:FB2170_16321 putative peptidase; PFAM: Peptidase M20, dimerisation; Peptidase M20; SPTR: Putative peptidase; peptidase dimerization domain-containing protein complement(2341177..2342703) Muricauda ruestringensis DSM 13258 11054967 YP_004788595.1 CDS Murru_2134 NC_015945.1 2342723 2343484 R PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; COGs: COG0159 Tryptophan synthase alpha chain; HAMAP: Tryptophan synthase, alpha chain; InterPro IPR002028; KEGG: fjo:Fjoh_4899 tryptophan synthase subunit alpha; PFAM: Tryptophan synthase, alpha chain; PRIAM: Tryptophan synthase; SPTR: Tryptophan synthase alpha chain; TIGRFAM: Tryptophan synthase, alpha chain; tryptophan synthase subunit alpha complement(2342723..2343484) Muricauda ruestringensis DSM 13258 11054968 YP_004788596.1 CDS Murru_2135 NC_015945.1 2343692 2344876 R PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; COGs: COG0133 Tryptophan synthase beta chain; HAMAP: Tryptophan synthase beta chain/beta chain-like; InterPro IPR006654:IPR023026:IPR001926; KEGG: fbc:FB2170_16306 tryptophan synthase subunit beta; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Tryptophan synthase; SPTR: Tryptophan synthase beta chain; TIGRFAM: Tryptophan synthase, beta chain; tryptophan synthase subunit beta complement(2343692..2344876) Muricauda ruestringensis DSM 13258 11054969 YP_004788597.1 CDS Murru_2136 NC_015945.1 2344889 2345590 R PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR001240; KEGG: fbc:FB2170_16301 putative N-(5'-phosphoribosyl)anthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); PRIAM: Phosphoribosylanthranilate isomerase; SPTR: N-(5'-phosphoribosyl)anthranilate isomerase; manually curated; phosphoribosylanthranilate isomerase complement(2344889..2345590) Muricauda ruestringensis DSM 13258 11054970 YP_004788598.1 CDS Murru_2137 NC_015945.1 2345722 2346507 R PFAM: Indole-3-glycerol phosphate synthase; COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR013798; KEGG: zpr:ZPR_0832 indole-3-glycerolphosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; PRIAM: Indole-3-glycerol-phosphate synthase; SPTR: Indole-3-glycerol phosphate synthase; Indole-3-glycerol phosphate synthase complement(2345722..2346507) Muricauda ruestringensis DSM 13258 11054971 YP_004788599.1 CDS Murru_2138 NC_015945.1 2346635 2347630 R PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase; COGs: COG0547 Anthranilate phosphoribosyltransferase; HAMAP: Anthranilate phosphoribosyl transferase; InterPro IPR005940:IPR017459:IPR000312; KEGG: fbc:FB2170_16291 anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; PRIAM: Anthranilate phosphoribosyltransferase; SPTR: Anthranilate phosphoribosyltransferase; TIGRFAM: Anthranilate phosphoribosyl transferase; anthranilate phosphoribosyltransferase complement(2346635..2347630) Muricauda ruestringensis DSM 13258 11054972 YP_004788600.1 CDS Murru_2139 NC_015945.1 2347765 2348331 R PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterPro IPR006221:IPR000991; KEGG: fbc:FB2170_16286 anthranilate synthase component II; PFAM: Glutamine amidotransferase class-I, C-terminal; PRIAM: Anthranilate synthase; SPTR: Anthranilate synthase component II; TIGRFAM: Anthranilate synthase, glutamine amidotransferase domain; glutamine amidotransferase of anthranilate synthase complement(2347765..2348331) Muricauda ruestringensis DSM 13258 11054973 YP_004788601.1 CDS Murru_2140 NC_015945.1 2348334 2349752 R PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region; COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR006805:IPR015890; KEGG: fbc:FB2170_16281 anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; PRIAM: Anthranilate synthase; SPTR: Anthranilate synthase component I; anthranilate synthase complement(2348334..2349752) Muricauda ruestringensis DSM 13258 11054974 YP_004788602.1 CDS Murru_2141 NC_015945.1 2349792 2350076 R PFAM: GIY-YIG catalytic domain; COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: hdn:Hden_0288 excinuclease ABC C subunit domain protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SMART: Excinuclease ABC, C subunit, N-terminal; SPTR: Endo/excinuclease amino terminal domain protein; excinuclease ABC C subunit domain-containing protein complement(2349792..2350076) Muricauda ruestringensis DSM 13258 11054975 YP_004788603.1 CDS Murru_2142 NC_015945.1 2350357 2350929 R PFAM: YceI-like domain; COGs: COG2353 conserved hypothetical protein; InterPro IPR007372; KEGG: fbc:FB2170_16276 YCE I like family protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like; SPTR: YCE I like family protein; hypothetical protein complement(2350357..2350929) Muricauda ruestringensis DSM 13258 11054976 YP_004788604.1 CDS Murru_2143 NC_015945.1 2350972 2351604 R PFAM: Nitroreductase family; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: fps:FP0515 nitroreductase; PFAM: Nitroreductase-like; SPTR: Putative uncharacterized protein; nitroreductase complement(2350972..2351604) Muricauda ruestringensis DSM 13258 11054977 YP_004788605.1 CDS Murru_2144 NC_015945.1 2351610 2352056 R PFAM: MarR family; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: fbc:FB2170_16271 hypothetical 161 kDa transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; MarR family transcriptional regulator complement(2351610..2352056) Muricauda ruestringensis DSM 13258 11054978 YP_004788606.1 CDS Murru_2145 NC_015945.1 2352191 2352745 D PFAM: AhpC/TSA family; InterPro IPR000866; KEGG: rbi:RB2501_02175 thioredoxin family protein; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Redoxin; alkyl hydroperoxide reductase 2352191..2352745 Muricauda ruestringensis DSM 13258 11054979 YP_004788607.1 CDS Murru_2146 NC_015945.1 2352752 2353384 D PFAM: AhpC/TSA family; InterPro IPR000866; KEGG: cat:CA2559_06425 hypothetical protein; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Thiol-disulfide isomerase or thioredoxin; alkyl hydroperoxide reductase 2352752..2353384 Muricauda ruestringensis DSM 13258 11054980 YP_004788608.1 CDS Murru_2147 NC_015945.1 2353465 2353776 D PFAM: Rhodanese-like domain; COGs: COG0607 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: rbi:RB2501_02165 rhodanese-like domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Rhodanese-like domain protein; rhodanese-like protein 2353465..2353776 Muricauda ruestringensis DSM 13258 11054981 YP_004788609.1 CDS Murru_2148 NC_015945.1 2353798 2355078 D PFAM: Protein of unknown function (DUF2851); KEGG: fbc:FB2170_16261 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2353798..2355078 Muricauda ruestringensis DSM 13258 11054982 YP_004788610.1 CDS Murru_2149 NC_015945.1 2355087 2355314 D PFAM: PspC domain; KEGG: rbi:RB2501_02160 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2355087..2355314 Muricauda ruestringensis DSM 13258 11054983 YP_004788611.1 CDS Murru_2150 NC_015945.1 2355317 2356324 D PFAM: TrkA-N domain; Ion channel; TrkA-C domain; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR013099:IPR003148:IPR006037; KEGG: rbi:RB2501_02155 potassium uptake protein, TrkA family; PFAM: Regulator of K+ conductance, N-terminal; Ion transport 2; Regulator of K+ conductance, C-terminal; SPTR: Potassium uptake protein, TrkA family; TrkA-N domain-containing protein 2355317..2356324 Muricauda ruestringensis DSM 13258 11054984 YP_004788612.1 CDS Murru_2151 NC_015945.1 2356410 2358473 D PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein; COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: rbi:RB2501_02150 sodium/alanine symporter; PFAM: Sodium:alanine symporter; SPTR: Sodium/alanine symporter; TIGRFAM: Sodium:alanine symporter; amino acid carrier protein 2356410..2358473 Muricauda ruestringensis DSM 13258 11054985 YP_004788613.1 CDS Murru_2152 NC_015945.1 2358493 2359347 D COGs: COG1555 DNA uptake protein and related DNA-binding protein; KEGG: fbc:FB2170_16241 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2358493..2359347 Muricauda ruestringensis DSM 13258 11054986 YP_004788614.1 CDS Murru_2153 NC_015945.1 2359358 2360527 D PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: zpr:ZPR_1152 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; PRIAM: Isovaleryl-CoA dehydrogenase; SPTR: Acyl-CoA dehydrogenase; isovaleryl-CoA dehydrogenase 2359358..2360527 Muricauda ruestringensis DSM 13258 11054987 YP_004788615.1 CDS Murru_2154 NC_015945.1 2360621 2360815 D PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; HAMAP: Ribosomal protein S21; InterPro IPR001911; KEGG: fbc:FB2170_16231 30S ribosomal protein S21; PFAM: Ribosomal protein S21; SPTR: 30S ribosomal protein S21; TIGRFAM: Ribosomal protein S21; 30S ribosomal protein S21 2360621..2360815 Muricauda ruestringensis DSM 13258 11054988 YP_004788616.1 CDS Murru_2155 NC_015945.1 2360913 2361803 D PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR004107:IPR002104; KEGG: fbc:FB2170_16226 putative site-specific recombinase; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: Putative site-specific recombinase; tyrosine recombinase XerC 2360913..2361803 Muricauda ruestringensis DSM 13258 11054989 YP_004788617.1 CDS Murru_2156 NC_015945.1 2361858 2362160 D PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; InterPro IPR003489; KEGG: fbc:FB2170_16221 sigma-54 modulation protein; SPTR: Sigma-54 modulation protein; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; ribosomal subunit interface protein 2361858..2362160 Muricauda ruestringensis DSM 13258 11054990 YP_004788618.1 CDS Murru_2157 NC_015945.1 2362802 2363989 D PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; COGs: COG0050 GTPase - translation elongation factors; InterProIPR004541:IPR005225:IPR000795:IPR004161:IPR 004160; KEGG: rbi:RB2501_02110 elongation factor Tu; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFTu/EF1A, C-terminal; SPTR: Elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; translation elongation factor Tu 2362802..2363989 Muricauda ruestringensis DSM 13258 11054995 YP_004788619.1 CDS Murru_2158 NC_015945.1 2364158 2364346 D PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial; InterPro IPR005807; KEGG: fbc:FB2170_16211 elongation factor Tu; SPTR: Elongation factor Tu; TIGRFAM: SecE subunit of protein translocation complex; preprotein translocase subunit SecE 2364158..2364346 Muricauda ruestringensis DSM 13258 11054997 YP_004788620.1 CDS Murru_2159 NC_015945.1 2364359 2364910 D PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; COGs: COG0250 Transcription antiterminator; InterPro IPR006645:IPR005824:IPR001062; KEGG: rbi:RB2501_02100 putative transcription antitermination protein; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; SMART: Transcription antitermination protein, NusG, N-terminal; KOW; SPTR: Transcription antitermination protein nusG; TIGRFAM: Transcription antitermination protein, NusG; NusG antitermination factor 2364359..2364910 Muricauda ruestringensis DSM 13258 11054998 YP_004788621.1 CDS Murru_2160 NC_015945.1 2364978 2365415 D PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11; COGs: COG0080 Ribosomal protein L11; InterPro IPR000911:IPR006519:IPR020784:IPR020783; KEGG: fbc:FB2170_16201 50S ribosomal protein L11; PFAM: Ribosomal protein L11, N-terminal domain; Ribosomal protein L11, C-terminal domain; SMART: Ribosomal protein L11; SPTR: 50S ribosomal protein L11; TIGRFAM: Ribosomal protein L11, bacterial-type; 50S ribosomal protein L11 2364978..2365415 Muricauda ruestringensis DSM 13258 11054999 YP_004788622.1 CDS Murru_2161 NC_015945.1 2365438 2366130 D PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast; COGs: COG0081 Ribosomal protein L1; InterPro IPR005878:IPR002143; KEGG: rbi:RB2501_02090 50S ribosomal protein L1; PFAM: Ribosomal protein L1; SPTR: 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; 50S ribosomal protein L1 2365438..2366130 Muricauda ruestringensis DSM 13258 11055000 YP_004788623.1 CDS Murru_2162 NC_015945.1 2366154 2366672 D PFAM: Ribosomal protein L10; COGs: COG0244 Ribosomal protein L10; HAMAP: Ribosomal protein L10; InterPro IPR022973:IPR001790; KEGG: rbi:RB2501_02085 50S ribosomal protein L10; PFAM: Ribosomal protein L10/acidic P0; SPTR: 50S ribosomal protein L10; 50S ribosomal protein L10 2366154..2366672 Muricauda ruestringensis DSM 13258 11055001 YP_004788624.1 CDS Murru_2163 NC_015945.1 2366728 2367111 D PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12; COGs: COG0222 Ribosomal protein L7/L12; HAMAP: Ribosomal protein L7/L12; InterPro IPR000206:IPR013823; KEGG: rbi:RB2501_02080 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal; SPTR: 50S ribosomal protein L7/L12; TIGRFAM: Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 2366728..2367111 Muricauda ruestringensis DSM 13258 11055002 YP_004788625.1 CDS Murru_2164 NC_015945.1 2367240 2371049 D PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit; COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; HAMAP: DNA-directed RNA polymerase, beta subunit, bacterial-type; InterProIPR010243:IPR007644:IPR007642:IPR007645:IPR 019462:IPR007120:IPR007641; KEGG: rbi:RB2501_02075 DNA-directed RNA polymerase subunit beta; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 2; RNA polymerase, beta subunit, protrusion; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7; SPTR: DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; DNA-directed RNA polymerase subunit beta 2367240..2371049 Muricauda ruestringensis DSM 13258 11055003 YP_004788626.1 CDS Murru_2165 NC_015945.1 2371088 2375386 D PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form; COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit; HAMAP: DNA-directed RNA polymerase, subunit beta-prime; InterProIPR006592:IPR012754:IPR007080:IPR000722:IPR 007066:IPR007083:IPR007081; KEGG: fbc:FB2170_16176 DNA-directed RNA polymerase subunit beta'; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5; SMART: RNA polymerase, N-terminal; SPTR: DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; DNA-directed RNA polymerase subunit beta' 2371088..2375386 Muricauda ruestringensis DSM 13258 11055004 YP_004788627.1 CDS Murru_2166 NC_015945.1 2375440 2375751 D PFAM: Protein of unknown function (DUF3467); KEGG: fbc:FB2170_16171 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2375440..2375751 Muricauda ruestringensis DSM 13258 11055005 YP_004788628.1 CDS Murru_2167 NC_015945.1 2375905 2376336 R KEGG: fbc:FB2170_11181 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2375905..2376336) Muricauda ruestringensis DSM 13258 11055006 YP_004788629.1 CDS Murru_2168 NC_015945.1 2376444 2378078 R PFAM: Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3; COGs: COG4108 Peptide chain release factor RF-3; InterPro IPR004548:IPR005225:IPR000795; KEGG: fbc:FB2170_16166 peptide chain release factor 3; PFAM: Protein synthesis factor, GTP-binding; SPTR: Peptide chain release factor 3; TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein; peptide chain release factor 3 complement(2376444..2378078) Muricauda ruestringensis DSM 13258 11055007 YP_004788630.1 CDS Murru_2169 NC_015945.1 2378430 2382218 D InterPro IPR003367; KEGG: fbc:FB2170_16161 AraC family transcriptional regulator; SPTR: Transcriptional regulator, AraC family with parallel beta-helix repeat; hypothetical protein 2378430..2382218 Muricauda ruestringensis DSM 13258 11055008 YP_004788631.1 CDS Murru_2170 NC_015945.1 2382231 2383178 D PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: rbi:RB2501_02045 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein 2382231..2383178 Muricauda ruestringensis DSM 13258 11055009 YP_004788632.1 CDS Murru_2171 NC_015945.1 2383190 2385139 D PFAM: WD40-like Beta Propeller Repeat; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR006665; KEGG: fbc:FB2170_16151 OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: OmpA family protein; OmpA/MotB domain-containing protein 2383190..2385139 Muricauda ruestringensis DSM 13258 11055010 YP_004788633.1 CDS Murru_2172 NC_015945.1 2385349 2385486 D hypothetical protein 2385349..2385486 Muricauda ruestringensis DSM 13258 11055011 YP_004788634.1 CDS Murru_2173 NC_015945.1 2385554 2387170 D PFAM: Collagen triple helix repeat (20 copies); InterPro IPR008160; KEGG: bcy:Bcer98_2389 triple helix repeat-containing collagen; PFAM: Collagen triple helix repeat; SPTR: Collagen triple helix repeat; collagen triple helix repeat-containing protein 2385554..2387170 Muricauda ruestringensis DSM 13258 11055012 YP_004788635.1 CDS Murru_2174 NC_015945.1 2387194 2389221 D InterPro IPR003367; KEGG: fbc:FB2170_16126 VCBS protein; SPTR: VCBS protein; VCBS protein 2387194..2389221 Muricauda ruestringensis DSM 13258 11055013 YP_004788636.1 CDS Murru_2175 NC_015945.1 2389225 2390178 D PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: fbc:FB2170_16121 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein 2389225..2390178 Muricauda ruestringensis DSM 13258 11055014 YP_004788637.1 CDS Murru_2176 NC_015945.1 2390235 2390768 D PFAM: NUDIX domain; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; COGs: COG1443 Isopentenyldiphosphate isomerase; HAMAP: Isopentenyl-diphosphate delta-isomerase, type 1; InterPro IPR011876:IPR000086; KEGG: fbc:FB2170_16116 putative isopentenyl-diphosphate delta-isomerase; PFAM: NUDIX hydrolase domain; PRIAM: Isopentenyl-diphosphate Delta-isomerase; SPTR: Putative isopentenyl-diphosphate delta-isomerase; TIGRFAM: Isopentenyl-diphosphate delta-isomerase, type 1; Isopentenyl-diphosphate Delta-isomerase 2390235..2390768 Muricauda ruestringensis DSM 13258 11055015 YP_004788638.1 CDS Murru_2177 NC_015945.1 2390765 2391172 D PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: 6-pyruvoyl tetrahydropterin synthase/QueD family protein; COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: fbc:FB2170_16111 putative 6-pyruvoyl tetrahydropterin synthase; PFAM: 6-pyruvoyl tetrahydropterin synthase-related; SPTR: Putative 6-pyruvoyl tetrahydropterin synthase; hypothetical protein 2390765..2391172 Muricauda ruestringensis DSM 13258 11055016 YP_004788639.1 CDS Murru_2178 NC_015945.1 2391174 2392142 D PFAM: Phosphomannose isomerase type I; TIGRFAM: mannose-6-phosphate isomerase, class I; COGs: COG1482 Phosphomannose isomerase; InterPro IPR001250; KEGG: fbc:FB2170_16106 mannose-6-phosphate isomerase; PFAM: Mannose-6-phosphate isomerase, type I; PRIAM: Mannose-6-phosphate isomerase; SPTR: Mannose-6-phosphate isomerase; TIGRFAM: Mannose-6-phosphate isomerase, type I; mannose-6-phosphate isomerase 2391174..2392142 Muricauda ruestringensis DSM 13258 11055017 YP_004788640.1 CDS Murru_2179 NC_015945.1 2392171 2392443 D KEGG: fbc:FB2170_16101 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2392171..2392443 Muricauda ruestringensis DSM 13258 11055018 YP_004788641.1 CDS Murru_2180 NC_015945.1 2392440 2393141 R KEGG: fbc:FB2170_16096 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2392440..2393141) Muricauda ruestringensis DSM 13258 11055019 YP_004788642.1 CDS Murru_2181 NC_015945.1 2393184 2394446 R PFAM: Protein of unknown function (DUF819); COGs: COG5505 integral membrane protein; InterPro IPR008537; KEGG: fbc:FB2170_16091 hypothetical protein; PFAM: Protein of unknown function DUF819; SPTR: Putative uncharacterized protein; hypothetical protein complement(2393184..2394446) Muricauda ruestringensis DSM 13258 11055020 YP_004788643.1 CDS Murru_2182 NC_015945.1 2394602 2396800 R PFAM: Domain of unknown function (DUF1083); KEGG: fbc:FB2170_16081 putative membrane associated hydrolase; SPTR: Putative membrane associated hydrolase; putative membrane associated hydrolase complement(2394602..2396800) Muricauda ruestringensis DSM 13258 11055021 YP_004788644.1 CDS Murru_2183 NC_015945.1 2396953 2397723 D PFAM: S1/P1 Nuclease; InterPro IPR003154; KEGG: fbc:FB2170_16071 putative S1/P1 nuclease; PFAM: S1/P1 nuclease; SPTR: Putative S1/P1 Nuclease; S1/P1 nuclease 2396953..2397723 Muricauda ruestringensis DSM 13258 11055022 YP_004788645.1 CDS Murru_2184 NC_015945.1 2397729 2398601 R PFAM: Cupin domain; Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: fbc:FB2170_16056 activator protein MtlR; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Activator protein MtlR; AraC family transcriptional regulator complement(2397729..2398601) Muricauda ruestringensis DSM 13258 11055023 YP_004788646.1 CDS Murru_2185 NC_015945.1 2398817 2399194 D KEGG: fbc:FB2170_16051 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2398817..2399194 Muricauda ruestringensis DSM 13258 11055024 YP_004788647.1 CDS Murru_2186 NC_015945.1 2399244 2399876 R PFAM: MOSC domain; COGs: COG2258 conserved hypothetical protein; InterPro IPR005302; KEGG: fbc:FB2170_16046 hypothetical protein; PFAM: Molybdenum cofactor sulfurase, C-terminal; SPTR: Putative uncharacterized protein; MOSC domain-containing protein complement(2399244..2399876) Muricauda ruestringensis DSM 13258 11055025 YP_004788648.1 CDS Murru_2187 NC_015945.1 2399945 2400298 R KEGG: gfo:GFO_0526 membrane protein; SPTR: Membrane protein; membrane protein complement(2399945..2400298) Muricauda ruestringensis DSM 13258 11055026 YP_004788649.1 CDS Murru_2188 NC_015945.1 2400433 2401011 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: fjo:Fjoh_1133 ECF subfamily RNA polymerase sigma-24 factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 2400433..2401011 Muricauda ruestringensis DSM 13258 11055027 YP_004788650.1 CDS Murru_2189 NC_015945.1 2401004 2401414 D KEGG: fjo:Fjoh_1132 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2401004..2401414 Muricauda ruestringensis DSM 13258 11055028 YP_004788651.1 CDS Murru_2190 NC_015945.1 2401579 2403078 R PFAM: Bacterial Ig-like domain (group 2); IPT/TIG domain; InterPro IPR002909:IPR003343; KEGG: phe:Phep_2967 hypothetical protein; PFAM: Bacterial Ig-like, group 2; Cell surface receptor IPT/TIG; SMART: Bacterial Ig-like, group 2; Cell surface receptor IPT/TIG; SPTR: Putative uncharacterized protein; Ig domain-containing protein complement(2401579..2403078) Muricauda ruestringensis DSM 13258 11055029 YP_004788652.1 CDS Murru_2191 NC_015945.1 2403178 2403537 R COGs: COG4270 membrane protein; KEGG: gfo:GFO_2346 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein complement(2403178..2403537) Muricauda ruestringensis DSM 13258 11055030 YP_004788653.1 CDS Murru_2192 NC_015945.1 2403600 2405486 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein; COGs: COG0326 Molecular chaperone HSP90 family; InterPro IPR003594:IPR020576; KEGG: fbc:FB2170_16006 heat shock protein 90; PFAM: Heat shock protein Hsp90, C-terminal; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Heat shock protein 90; Heat shock protein Hsp90 complement(2403600..2405486) Muricauda ruestringensis DSM 13258 11055031 YP_004788654.1 CDS Murru_2193 NC_015945.1 2405822 2406478 D KEGG: zpr:ZPR_1192 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2405822..2406478 Muricauda ruestringensis DSM 13258 11055032 YP_004788655.1 CDS Murru_2194 NC_015945.1 2406484 2407794 D PFAM: ABC1 family; COGs: COG0661 unusual protein kinase; InterPro IPR004147; KEGG: rbi:RB2501_01910 ABC1 family protein; PFAM: ABC-1; SPTR: ABC-1; ABC-1 domain-containing protein 2406484..2407794 Muricauda ruestringensis DSM 13258 11055033 YP_004788656.1 CDS Murru_2195 NC_015945.1 2407890 2408900 D PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); InterPro IPR004655:IPR013751:IPR013747; KEGG: fbc:FB2170_16001 3-oxoacyl-(acyl carrier protein) synthase; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase III; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase 3 2; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); 3-oxoacyl-ACP synthase 2407890..2408900 Muricauda ruestringensis DSM 13258 11055034 YP_004788657.1 CDS Murru_2196 NC_015945.1 2409022 2411472 R PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR017690:IPR012910:IPR000531; KEGG: fbc:FB2170_15996 TonB-dependent receptor domain-containing protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor domain protein; TIGRFAM: Outer membrane insertion C-terminal signal, omp85; outer membrane insertion C-terminal signal protein complement(2409022..2411472) Muricauda ruestringensis DSM 13258 11055035 YP_004788658.1 CDS Murru_2197 NC_015945.1 2411822 2412181 D KEGG: cat:CA2559_07570 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2411822..2412181 Muricauda ruestringensis DSM 13258 11055036 YP_004788659.1 CDS Murru_2198 NC_015945.1 2412165 2413652 R PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: fbc:FB2170_15986 putative cation symporter; PFAM: Sodium/solute symporter; SPTR: Putative cation symporter; Na+/solute symporter complement(2412165..2413652) Muricauda ruestringensis DSM 13258 11055037 YP_004788660.1 CDS Murru_2199 NC_015945.1 2413729 2414349 D PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR; COGs: COG0353 Recombinational DNA repair protein (RecF pathway); HAMAP: RecR protein; InterPro IPR006171:IPR000093:IPR015967; KEGG: fbc:FB2170_15981 recombination protein RecR; SMART: Toprim domain; SPTR: Recombination protein recR; TIGRFAM: RecR protein; Recombination protein recR 2413729..2414349 Muricauda ruestringensis DSM 13258 11055038 YP_004788661.1 CDS Murru_2200 NC_015945.1 2414429 2415790 D PFAM: 2-oxoacid dehydrogenases acyltransferase (catalytic domain); e3 binding domain; Biotin-requiring enzyme; COGs: COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide acyltransferase (E2) protein; InterPro IPR000089:IPR004167:IPR001078; KEGG: fbc:FB2170_15976 lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding; PRIAM: Dihydrolipoyllysine-residue succinyltransferase; SPTR: Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex; dihydrolipoyllysine-residue succinyltransferase 2414429..2415790 Muricauda ruestringensis DSM 13258 11055039 YP_004788662.1 CDS Murru_2201 NC_015945.1 2415863 2416636 D PFAM: Exonuclease; COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR006055:IPR013520; KEGG: fbc:FB2170_15966 putative DNA polymerase III subunit epsilon; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease; SPTR: Putative DNA polymerase III epsilon chain; Exonuclease RNase T and DNA polymerase III 2415863..2416636 Muricauda ruestringensis DSM 13258 11055040 YP_004788663.1 CDS Murru_2202 NC_015945.1 2416666 2417277 D PFAM: Fumarylacetoacetate (FAA) hydrolase family; COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: fbc:FB2170_15956 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; PFAM: Fumarylacetoacetase, C-terminal-like; SPTR: 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; fumarylacetoacetate (FAA) hydrolase 2416666..2417277 Muricauda ruestringensis DSM 13258 11055041 YP_004788664.1 CDS Murru_2203 NC_015945.1 2417277 2417615 D PFAM: Hpt domain; InterPro IPR008207; KEGG: rbi:RB2501_01865 hypothetical protein; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SPTR: Putative uncharacterized protein; Hpt domain-containing protein 2417277..2417615 Muricauda ruestringensis DSM 13258 11055042 YP_004788665.1 CDS Murru_2204 NC_015945.1 2417616 2418866 D PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain; COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR001453:IPR008135:IPR008136; KEGG: fbc:FB2170_15946 putative competence-damage inducible; PFAM: CinA, C-terminal; Molybdopterin binding; SMART: Molybdopterin binding; SPTR: CinA-like protein; TIGRFAM: Competence-induced protein CinA; CinA, C-terminal; competence/damage-inducible protein CinA 2417616..2418866 Muricauda ruestringensis DSM 13258 11055043 YP_004788666.1 CDS Murru_2205 NC_015945.1 2418941 2419168 D PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; COGs: COG0227 Ribosomal protein L28; HAMAP: Ribosomal protein L28; InterPro IPR001383; KEGG: rbi:RB2501_01855 50S ribosomal protein L28; PFAM: Ribosomal protein L28; SPTR: 50S ribosomal protein L28; TIGRFAM: Ribosomal protein L28; 50S ribosomal protein L28 2418941..2419168 Muricauda ruestringensis DSM 13258 11055044 YP_004788667.1 CDS Murru_2206 NC_015945.1 2419197 2419379 D PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; HAMAP: Ribosomal protein L33; InterPro IPR001705; KEGG: rbi:RB2501_01850 50S ribosomal protein L33; PFAM: Ribosomal protein L33; SPTR: 50S ribosomal protein L33; TIGRFAM: Ribosomal protein L33; 50S ribosomal protein L33 2419197..2419379 Muricauda ruestringensis DSM 13258 11055045 YP_004788668.1 CDS Murru_2207 NC_015945.1 2419418 2419570 D KEGG: fbc:FB2170_15931 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2419418..2419570 Muricauda ruestringensis DSM 13258 11055046 YP_004788669.1 CDS Murru_2208 NC_015945.1 2419744 2420700 D PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY; COGs: COG0552 Signal recognition particle GTPase; InterPro IPR013822:IPR003593:IPR000897:IPR004390; KEGG: fbc:FB2170_15926 putative recognition particle-docking protein; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core; SPTR: Putative recognition particle-docking protein; TIGRFAM: Cell division transporter substrate-binding protein FtsY; signal recognition particle-docking protein FtsY 2419744..2420700 Muricauda ruestringensis DSM 13258 11055047 YP_004788670.1 CDS Murru_2209 NC_015945.1 2420706 2422367 D PFAM: Amidase; COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; InterPro IPR000120; KEGG: rbi:RB2501_01835 amidase; PFAM: Amidase; PRIAM: Amidase; SPTR: Amidase; amidase 2420706..2422367 Muricauda ruestringensis DSM 13258 11055048 YP_004788671.1 CDS Murru_2210 NC_015945.1 2422484 2423785 D PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family; COGs: COG0621 2-methylthioadenine synthetase; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; InterProIPR006638:IPR005839:IPR005840:IPR013848:IPR 007197:IPR002792; KEGG: zpr:ZPR_1253 radical SAM superfamily protein, UPF0004; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: 2-methylthioadenine synthetase; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; 30S ribosomal protein S12 methylthiotransferase RimO 2422484..2423785 Muricauda ruestringensis DSM 13258 11055049 YP_004788672.1 CDS Murru_2211 NC_015945.1 2423837 2424043 R hypothetical protein complement(2423837..2424043) Muricauda ruestringensis DSM 13258 11055050 YP_004788673.1 CDS Murru_2212 NC_015945.1 2424108 2424587 D PFAM: DoxX; InterPro IPR011637; KEGG: fbc:FB2170_08079 hypothetical protein; PFAM: Uncharacterised protein family YphA; SPTR: Putative uncharacterized protein; DoxX family protein 2424108..2424587 Muricauda ruestringensis DSM 13258 11055051 YP_004788674.1 CDS Murru_2213 NC_015945.1 2424584 2426200 D PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: fbc:FB2170_08084 hypothetical protein; PFAM: Oxidoreductase, N-terminal; SPTR: Putative uncharacterized protein; oxidoreductase domain-containing protein 2424584..2426200 Muricauda ruestringensis DSM 13258 11055052 YP_004788675.1 CDS Murru_2214 NC_015945.1 2426318 2427451 R KEGG: fbc:FB2170_00530 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2426318..2427451) Muricauda ruestringensis DSM 13258 11055053 YP_004788676.1 CDS Murru_2215 NC_015945.1 2427462 2427719 R KEGG: fbc:FB2170_00525 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2427462..2427719) Muricauda ruestringensis DSM 13258 11055054 YP_004788677.1 CDS Murru_2216 NC_015945.1 2427724 2428176 R PFAM: Polyketide cyclase / dehydrase and lipid transport; KEGG: fbc:FB2170_00520 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2427724..2428176) Muricauda ruestringensis DSM 13258 11055055 YP_004788678.1 CDS Murru_2217 NC_015945.1 2428243 2429175 D KEGG: fbc:FB2170_00515 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2428243..2429175 Muricauda ruestringensis DSM 13258 11055056 YP_004788679.1 CDS Murru_2218 NC_015945.1 2429144 2430559 D PFAM: PPIC-type PPIASE domain; InterPro IPR015391:IPR000297; KEGG: fbc:FB2170_00510 putative exported peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SurA N-terminal; SPTR: Putative exported peptidyl-prolyl cis-trans isomerase; PpiC-type peptidyl-prolyl cis-trans isomerase 2429144..2430559 Muricauda ruestringensis DSM 13258 11055057 YP_004788680.1 CDS Murru_2219 NC_015945.1 2430564 2431517 D PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0714 MoxR-like ATPase; InterPro IPR011703; KEGG: fbc:FB2170_00505 methanol dehydrogenase regulator; PFAM: ATPase, AAA-3; SPTR: Methanol dehydrogenase regulator; ATPase 2430564..2431517 Muricauda ruestringensis DSM 13258 11055058 YP_004788681.1 CDS Murru_2220 NC_015945.1 2431622 2433889 D PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase, mitochondrial; COGs: COG1048 Aconitase A; InterPro IPR006248:IPR001030:IPR000573; KEGG: fbc:FB2170_00500 aconitate hydratase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel; SPTR: Aconitate hydratase; TIGRFAM: Aconitase, mitochondrial-like; aconitate hydratase 2431622..2433889 Muricauda ruestringensis DSM 13258 11055059 YP_004788682.1 CDS Murru_2221 NC_015945.1 2434133 2434693 D PFAM: AhpC/TSA family; KEGG: rbi:RB2501_11832 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2434133..2434693 Muricauda ruestringensis DSM 13258 11055060 YP_004788683.1 CDS Murru_2222 NC_015945.1 2434690 2435256 D PFAM: Redoxin; InterPro IPR013740; KEGG: fbc:FB2170_00490 thioredoxin; PFAM: Redoxin; SPTR: Thioredoxin; redoxin domain-containing protein 2434690..2435256 Muricauda ruestringensis DSM 13258 11055061 YP_004788684.1 CDS Murru_2223 NC_015945.1 2435260 2435712 R PFAM: Fatty acid hydroxylase superfamily; InterPro IPR006694; KEGG: rbi:RB2501_11837 beta carotene hydroxylase; PFAM: Fatty acid hydroxylase; SPTR: Beta carotene hydroxylase; fatty acid hydroxylase complement(2435260..2435712) Muricauda ruestringensis DSM 13258 11055062 YP_004788685.1 CDS Murru_2224 NC_015945.1 2435709 2436551 R PFAM: Squalene/phytoene synthase; COGs: COG1562 Phytoene/squalene synthetase; InterPro IPR002060; KEGG: rbi:RB2501_11842 putative phytoene synthase; PFAM: Squalene/phytoene synthase; PRIAM: Phytoene synthase; SPTR: Putative phytoene synthase; phytoene synthase complement(2435709..2436551) Muricauda ruestringensis DSM 13258 11055063 YP_004788686.1 CDS Murru_2225 NC_015945.1 2436548 2438008 R PFAM: Flavin containing amine oxidoreductase; TIGRFAM: phytoene desaturase; COGs: COG1233 Phytoene dehydrogenase and related protein; InterPro IPR014105:IPR006076; KEGG: rbi:RB2501_11847 phytoene dehydrogenase; PFAM: FAD dependent oxidoreductase; SPTR: Phytoene desaturase; TIGRFAM: Zeta-phytoene desaturase; phytoene desaturase complement(2436548..2438008) Muricauda ruestringensis DSM 13258 11055064 YP_004788687.1 CDS Murru_2226 NC_015945.1 2438015 2438914 R InterPro IPR000551; KEGG: rbi:RB2501_11852 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; SPTR: Transcriptional regulator, MerR family protein; regulatory protein MerR complement(2438015..2438914) Muricauda ruestringensis DSM 13258 11055065 YP_004788688.1 CDS Murru_2227 NC_015945.1 2439015 2439140 D hypothetical protein 2439015..2439140 Muricauda ruestringensis DSM 13258 11055066 YP_004788689.1 CDS Murru_2228 NC_015945.1 2439153 2440763 R PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein; COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: fbc:FB2170_16246 putative Na(+)-linked D-alanine glycine permease; PFAM: Sodium:alanine symporter; SPTR: Putative Na(+)-linked D-alanine glycine permease; TIGRFAM: Sodium:alanine symporter; amino acid carrier protein complement(2439153..2440763) Muricauda ruestringensis DSM 13258 11055067 YP_004788690.1 CDS Murru_2229 NC_015945.1 2440870 2441973 R SPTR: Putative uncharacterized protein; hypothetical protein complement(2440870..2441973) Muricauda ruestringensis DSM 13258 11055068 YP_004788691.1 CDS Murru_2230 NC_015945.1 2442478 2443749 D PFAM: Mechanosensitive ion channel; COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: rbi:RB2501_10842 putative membrane transport protein; PFAM: Mechanosensitive ion channel MscS; SPTR: Putative membrane transport protein; mechanosensitive ion channel protein MscS 2442478..2443749 Muricauda ruestringensis DSM 13258 11055070 YP_004788692.1 CDS Murru_2231 NC_015945.1 2443753 2444457 R PFAM: Phosphorylase superfamily; TIGRFAM: purine-nucleoside phosphorylase, family 1 (deoD); COGs: COG0813 Purine-nucleoside phosphorylase; HAMAP: Purine nucleoside phosphorylase; InterPro IPR004402:IPR000845; KEGG: fbc:FB2170_00405 purine nucleoside phosphorylase; PFAM: Nucleoside phosphorylase domain; PRIAM: Purine-nucleoside phosphorylase; SPTR: Purine nucleoside phosphorylase; TIGRFAM: Purine nucleoside phosphorylase; purine nucleoside phosphorylase complement(2443753..2444457) Muricauda ruestringensis DSM 13258 11055071 YP_004788693.1 CDS Murru_2232 NC_015945.1 2444467 2445105 R PFAM: DeoC/LacD family aldolase; TIGRFAM: deoxyribose-phosphate aldolase; COGs: COG0274 Deoxyribose-phosphate aldolase; HAMAP: Deoxyribose-phosphate aldolase, type 1; InterPro IPR011343:IPR022979:IPR002915; KEGG: ipo:Ilyop_1462 deoxyribose-phosphate aldolase; PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase; PRIAM: Deoxyribose-phosphate aldolase; SPTR: Deoxyribose-phosphate aldolase; TIGRFAM: Deoxyribose-phosphate aldolase; Deoxyribose-phosphate aldolase complement(2444467..2445105) Muricauda ruestringensis DSM 13258 11055072 YP_004788694.1 CDS Murru_2233 NC_015945.1 2445107 2445511 R KEGG: fbc:FB2170_14548 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2445107..2445511) Muricauda ruestringensis DSM 13258 11055073 YP_004788695.1 CDS Murru_2234 NC_015945.1 2445666 2446724 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR000014:IPR003661:IPR003594:IPR013655; KEGG: mtt:Ftrac_2914 pas/pac sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; PAS fold-3; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Two-component system sensor histidine kinase; TIGRFAM: PAS; PAS/PAC sensor signal transduction histidine kinase complement(2445666..2446724) Muricauda ruestringensis DSM 13258 11055074 YP_004788696.1 CDS Murru_2235 NC_015945.1 2447348 2447860 D PFAM: Shikimate kinase; COGs: COG0703 Shikimate kinase; HAMAP: Shikimate kinase; InterPro IPR000623; KEGG: rbi:RB2501_12317 shikimate kinase; PFAM: Shikimate kinase; PRIAM: Shikimate kinase; SPTR: Shikimate kinase; shikimate kinase 2447348..2447860 Muricauda ruestringensis DSM 13258 11055076 YP_004788697.1 CDS Murru_2236 NC_015945.1 2447852 2448349 R PFAM: Phosphoribosyl transferase domain; COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; InterPro IPR000836; KEGG: rbi:RB2501_12322 pyrimidine regulatory protein PyrR; PFAM: Phosphoribosyltransferase; SPTR: Pyrimidine regulatory protein PyrR; phosphoribosyltransferase complement(2447852..2448349) Muricauda ruestringensis DSM 13258 11055077 YP_004788698.1 CDS Murru_2237 NC_015945.1 2448386 2448757 R PFAM: S4 domain; COGs: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); InterPro IPR002942; KEGG: fbc:FB2170_00080 heat shock protein 15; PFAM: RNA-binding S4; SMART: RNA-binding S4; SPTR: Heat shock protein 15; RNA-binding S4 domain-containing protein complement(2448386..2448757) Muricauda ruestringensis DSM 13258 11055078 YP_004788699.1 CDS Murru_2238 NC_015945.1 2448836 2449783 D KEGG: rbi:RB2501_12337 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2448836..2449783 Muricauda ruestringensis DSM 13258 11055079 YP_004788700.1 CDS Murru_2239 NC_015945.1 2449860 2450471 R KEGG: fbc:FB2170_00070 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2449860..2450471) Muricauda ruestringensis DSM 13258 11055080 YP_004788701.1 CDS Murru_2240 NC_015945.1 2450521 2451474 R PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; COGs: COG3958 Transketolase C-terminal subunit; InterPro IPR005475:IPR005476; KEGG: rbi:RB2501_12347 transketolase, C-terminal subunit; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: 1-deoxy-D-xylulose-5-phosphate synthase; SMART: Transketolase-like, pyrimidine-binding domain; SPTR: Transketolase, C-terminal subunit; 1-deoxy-D-xylulose-5-phosphate synthase complement(2450521..2451474) Muricauda ruestringensis DSM 13258 11055081 YP_004788702.1 CDS Murru_2241 NC_015945.1 2451493 2452338 R PFAM: Transketolase, thiamine diphosphate binding domain; COGs: COG3959 Transketolase N-terminal subunit; InterPro IPR005474; KEGG: rbi:RB2501_12352 transketolase, N-terminal subunit; PFAM: Transketolase, N-terminal; PRIAM: Transketolase; SPTR: Transketolase, N-terminal subunit; transketolase complement(2451493..2452338) Muricauda ruestringensis DSM 13258 11055082 YP_004788703.1 CDS Murru_2242 NC_015945.1 2452495 2453625 D PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming; COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase; HAMAP: Queuine tRNA-ribosyltransferase; InterPro IPR004803:IPR002616; KEGG: fjo:Fjoh_0045 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; PRIAM: tRNA-guanine transglycosylase; SPTR: Queuine tRNA-ribosyltransferase; TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 2452495..2453625 Muricauda ruestringensis DSM 13258 11055083 YP_004788704.1 CDS Murru_2243 NC_015945.1 2453625 2454707 D PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: rbi:RB2501_12362 hypothetical protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Putative uncharacterized protein; YjgP/YjgQ family permease 2453625..2454707 Muricauda ruestringensis DSM 13258 11055084 YP_004788705.1 CDS Murru_2244 NC_015945.1 2454822 2455775 D PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; COGs: COG0825 Acetyl-CoA carboxylase alpha subunit; HAMAP: Acetyl-CoA carboxylase, alpha subunit; InterPro IPR001095; KEGG: fbc:FB2170_00050 acetyl-CoA carboxylase subunit alpha; PFAM: Acetyl-CoA carboxylase, alpha subunit; PRIAM: Acetyl-CoA carboxylase; SPTR: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: Acetyl-CoA carboxylase, alpha subunit; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 2454822..2455775 Muricauda ruestringensis DSM 13258 11055085 YP_004788706.1 CDS Murru_2245 NC_015945.1 2455943 2457490 D PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase; COGs: COG0305 Replicative DNA helicase; InterPro IPR003593:IPR007692:IPR007693:IPR007694; KEGG: fbc:FB2170_00045 replicative DNA helicase; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; SMART: ATPase, AAA+ type, core; SPTR: Replicative DNA helicase; TIGRFAM: DNA helicase, DnaB type; replicative DNA helicase 2455943..2457490 Muricauda ruestringensis DSM 13258 11055086 YP_004788707.1 CDS Murru_2246 NC_015945.1 2457504 2458781 D KEGG: fbc:FB2170_00040 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2457504..2458781 Muricauda ruestringensis DSM 13258 11055087 YP_004788708.1 CDS Murru_2247 NC_015945.1 2458778 2459677 R hypothetical protein complement(2458778..2459677) Muricauda ruestringensis DSM 13258 11055088 YP_004788709.1 CDS Murru_2248 NC_015945.1 2459787 2460674 R PFAM: Dienelactone hydrolase family; COGs: COG0412 Dienelactone hydrolase; InterPro IPR002925; KEGG: dfe:Dfer_3354 carboxymethylenebutenolidase; PFAM: Dienelactone hydrolase; PRIAM: Carboxymethylenebutenolidase; SPTR: Dienelactone hydrolase family protein; carboxymethylenebutenolidase complement(2459787..2460674) Muricauda ruestringensis DSM 13258 11055089 YP_004788710.1 CDS Murru_2249 NC_015945.1 2460762 2461553 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily; HAD-superfamily hydrolase, subfamily IIB; COGs: COG0561 hydrolase of the HAD superfamily; InterPro IPR000150:IPR006379:IPR013200; KEGG: rbi:RB2501_12382 putative hydrolase of the HAD superfamily protein; PFAM: HAD superfamily hydrolase-like, type 3; PRIAM: Sugar-phosphatase; SPTR: Predicted hydrolase of the HAD superfamily protein; TIGRFAM: Cof protein; HAD-superfamily hydrolase, subfamily IIB; cof family hydrolase complement(2460762..2461553) Muricauda ruestringensis DSM 13258 11055090 YP_004788711.1 CDS Murru_2250 NC_015945.1 2461653 2462075 D PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: fbc:FB2170_00030 hypothetical protein; PFAM: Uncharacterised protein family UPF0047; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0047; hypothetical protein 2461653..2462075 Muricauda ruestringensis DSM 13258 11055091 YP_004788712.1 CDS Murru_2251 NC_015945.1 2462193 2462537 R PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20; COGs: COG0292 Ribosomal protein L20; HAMAP: Ribosomal protein L20; InterPro IPR005813; KEGG: fbc:FB2170_00020 50S ribosomal protein L20; PFAM: Ribosomal protein L20; SPTR: 50S ribosomal protein L20; TIGRFAM: Ribosomal protein L20; 50S ribosomal protein L20 complement(2462193..2462537) Muricauda ruestringensis DSM 13258 11055092 YP_004788713.1 CDS Murru_2252 NC_015945.1 2462629 2462826 R PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; HAMAP: Ribosomal protein L35, non-mitochondrial; InterPro IPR001706:IPR021137; KEGG: rbi:RB2501_12397 50S ribosomal protein L35; PFAM: Ribosomal protein L35; SPTR: 50S ribosomal protein L35; TIGRFAM: Ribosomal protein L35, non-mitochondrial; 50S ribosomal protein L35 complement(2462629..2462826) Muricauda ruestringensis DSM 13258 11055093 YP_004788714.1 CDS Murru_2253 NC_015945.1 2462875 2463318 R PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; COGs: COG0290 Translation initiation factor 3 (IF-3); InterPro IPR001288:IPR019814:IPR019815; KEGG: cat:CA2559_00820 translation initiation factor IF-3; PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal; SPTR: Translation initiation factor IF-3; TIGRFAM: Translation initiation factor 3; translation initiation factor IF-3 complement(2462875..2463318) Muricauda ruestringensis DSM 13258 11055094 YP_004788715.1 CDS Murru_2254 NC_015945.1 2463463 2465403 R PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase; COGs: COG0441 Threonyl-tRNA synthetase; InterProIPR012947:IPR002320:IPR004095:IPR002314:IPR 004154; KEGG: fbc:FB2170_00005 threonyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding; SMART: Threonyl/alanyl tRNA synthetase, SAD; SPTR: Threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; threonyl-tRNA synthetase complement(2463463..2465403) Muricauda ruestringensis DSM 13258 11055095 YP_004788716.1 CDS Murru_2255 NC_015945.1 2471153 2471788 D PFAM: Haemolysin-III related; TIGRFAM: channel protein, hemolysin III family; COGs: COG1272 membrane protein hemolysin III homolog; InterPro IPR005744:IPR004254; KEGG: rbi:RB2501_16204 putative hemolysin III; PFAM: Hly-III-related; SPTR: Probable hemolysin III; TIGRFAM: HylII; hemolysin III family channel protein 2471153..2471788 Muricauda ruestringensis DSM 13258 11055101 YP_004788717.1 CDS Murru_2256 NC_015945.1 2471809 2474055 R KEGG: fbc:FB2170_09026 fibronectin type III domain-containing protein; SPTR: Fibronectin type III domain protein; fibronectin type III domain-containing protein complement(2471809..2474055) Muricauda ruestringensis DSM 13258 11055102 YP_004788718.1 CDS Murru_2257 NC_015945.1 2474111 2475868 R KEGG: fbc:FB2170_09026 fibronectin type III domain-containing protein; SPTR: Fibronectin type III domain protein; fibronectin type III domain-containing protein complement(2474111..2475868) Muricauda ruestringensis DSM 13258 11055103 YP_004788719.1 CDS Murru_2258 NC_015945.1 2476011 2476697 R KEGG: fbc:FB2170_09091 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2476011..2476697) Muricauda ruestringensis DSM 13258 11055104 YP_004788720.1 CDS Murru_2259 NC_015945.1 2476754 2477908 D PFAM: Putative RNA methylase family UPF0020; THUMP domain; COGs: COG0116 N6-adenine-specific DNA methylase; InterPro IPR004114:IPR000241; KEGG: fbc:FB2170_09096 putative methylase; PFAM: Putative RNA methylase; THUMP; PRIAM: rRNA (guanine-N(2)-)-methyltransferase; SMART: THUMP; SPTR: Putative methylase; rRNA (guanine-N(2)-)-methyltransferase 2476754..2477908 Muricauda ruestringensis DSM 13258 11055105 YP_004788721.1 CDS Murru_2260 NC_015945.1 2478010 2478546 D hypothetical protein 2478010..2478546 Muricauda ruestringensis DSM 13258 11055106 YP_004788722.1 CDS Murru_2262 NC_015945.1 2478934 2479275 R PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; COGs: COG3324 protein related to lactoylglutathione lyase; InterPro IPR004360; KEGG: rbi:RB2501_11967 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Putative uncharacterized protein; bleomycin resistance protein complement(2478934..2479275) Muricauda ruestringensis DSM 13258 11055108 YP_004788723.1 CDS Murru_2263 NC_015945.1 2479277 2480032 R KEGG: fbc:FB2170_09106 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2479277..2480032) Muricauda ruestringensis DSM 13258 11055109 YP_004788724.1 CDS Murru_2264 NC_015945.1 2480013 2480531 R KEGG: fbc:FB2170_09111 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2480013..2480531) Muricauda ruestringensis DSM 13258 11055110 YP_004788725.1 CDS Murru_2265 NC_015945.1 2480562 2481974 R PFAM: tRNA (Uracil-5-)-methyltransferase; TIGRFAM: 23S rRNA (uracil-5-)-methyltransferase RumA; COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR001566:IPR010280; KEGG: fbc:FB2170_09116 putative RNA methyltransferase; PFAM: (Uracil-5)-methyltransferase; SPTR: Putative RNA methyltransferase; TIGRFAM: 23S rRNA methyltransferase/RumA; TrmA family RNA methyltransferase complement(2480562..2481974) Muricauda ruestringensis DSM 13258 11055111 YP_004788726.1 CDS Murru_2266 NC_015945.1 2482209 2483453 D PFAM: Aminotransferase class-III; TIGRFAM: ornithine aminotransferase; COGs: COG4992 Ornithine/acetylornithine aminotransferase; InterPro IPR010164:IPR005814; KEGG: fps:FP0739 ornithine--oxo-acid transaminase; PFAM: Aminotransferase class-III; PRIAM: Ornithine aminotransferase; SPTR: Ornithine aminotransferase (Glutamate-1-semialdehyde 2,1-aminomutase); TIGRFAM: Ornithine aminotransferase; ornithine aminotransferase 2482209..2483453 Muricauda ruestringensis DSM 13258 11055112 YP_004788727.1 CDS Murru_2267 NC_015945.1 2483860 2484351 D TIGRFAM: PAS domain S-box; KEGG: zpr:ZPR_4320 thioesterase superfamily protein; SPTR: Multi-sensor Hybrid Histidine Kinase; thioesterase superfamily protein 2483860..2484351 Muricauda ruestringensis DSM 13258 11055113 YP_004788728.1 CDS Murru_2268 NC_015945.1 2484641 2485240 D PFAM: Nicotinamide mononucleotide transporter; TIGRFAM: nicotinamide mononucleotide transporter PnuC; COGs: COG3201 Nicotinamide mononucleotide transporter; InterPro IPR006419; KEGG: cpi:Cpin_0720 nicotinamide mononucleotide transporter PnuC; PFAM: Nicotinamide mononucleotide transporter PnuC; SPTR: Putative membrane transporter involved in nicotinamide mononucleotide transport; TIGRFAM: Nicotinamide mononucleotide transporter PnuC; nicotinamide mononucleotide transporter PnuC 2484641..2485240 Muricauda ruestringensis DSM 13258 11055114 YP_004788729.1 CDS Murru_2269 NC_015945.1 2485209 2486225 D PFAM: Acyl-CoA dehydrogenase, C-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; KEGG: gym:GYMC10_2928 acyl-CoA dehydrogenase type 2 domain protein; SPTR: Acyl-CoA dehydrogenase-like; hypothetical protein 2485209..2486225 Muricauda ruestringensis DSM 13258 11055115 YP_004788730.1 CDS Murru_2270 NC_015945.1 2486385 2488697 R PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764:IPR002772; KEGG: sli:Slin_1258 glycoside hydrolase family 3 domain protein; PFAM: Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal; PRIAM: Xylan 1,4-beta-xylosidase; SPTR: Periplasmic beta-glucosidase/beta-xylosidase; xylan 1,4-beta-xylosidase complement(2486385..2488697) Muricauda ruestringensis DSM 13258 11055116 YP_004788731.1 CDS Murru_2271 NC_015945.1 2488785 2489816 R PFAM: Putative esterase; COGs: COG0627 esterase; InterPro IPR000801; KEGG: lby:Lbys_0275 esterase; PFAM: Putative esterase; SPTR: Esterase; esterase complement(2488785..2489816) Muricauda ruestringensis DSM 13258 11055117 YP_004788732.1 CDS Murru_2272 NC_015945.1 2489827 2490138 R KEGG: amt:Amet_4242 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2489827..2490138) Muricauda ruestringensis DSM 13258 11055118 YP_004788733.1 CDS Murru_2273 NC_015945.1 2490142 2491479 R PFAM: Protein of unknown function (DUF1446); InterPro IPR010839; KEGG: bpy:Bphyt_4091 protein of unknown function DUF1446; PFAM: Protein of unknown function DUF1446; SPTR: Putative uncharacterized protein; hypothetical protein complement(2490142..2491479) Muricauda ruestringensis DSM 13258 11055119 YP_004788734.1 CDS Murru_2274 NC_015945.1 2491481 2492779 R PFAM: Citrate transporter; TIGRFAM: citrate transporter, CitMHS family; COGs: COG2851 H+/citrate symporter; InterPro IPR014738:IPR004680; KEGG: rpf:Rpic12D_3734 citrate/H+ symporter, CitMHS family; PFAM: Divalent ion symporter; SPTR: Citrate transporter; TIGRFAM: Citrate transporter; CitMHS family citrate/H+ symporter complement(2491481..2492779) Muricauda ruestringensis DSM 13258 11055120 YP_004788735.1 CDS Murru_2275 NC_015945.1 2492822 2494333 R PFAM: Protein of unknown function (DUF1593); InterPro IPR011483; KEGG: rbi:RB2501_13119 hypothetical protein; PFAM: Protein of unknown function DUF1593; SPTR: Putative uncharacterized protein; hypothetical protein complement(2492822..2494333) Muricauda ruestringensis DSM 13258 11055121 YP_004788736.1 CDS Murru_2276 NC_015945.1 2494362 2495729 R PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: fbc:FB2170_14798 hypothetical protein; PFAM: Oxidoreductase, N-terminal; SPTR: Putative uncharacterized protein; oxidoreductase domain-containing protein complement(2494362..2495729) Muricauda ruestringensis DSM 13258 11055122 YP_004788737.1 CDS Murru_2277 NC_015945.1 2495729 2496322 R TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; InterPro IPR006311; KEGG: fbc:FB2170_10299 hypothetical protein; SPTR: Putative acetate--CoA ligase; hypothetical protein complement(2495729..2496322) Muricauda ruestringensis DSM 13258 11055123 YP_004788738.1 CDS Murru_2278 NC_015945.1 2496325 2498031 R PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076; KEGG: rbi:RB2501_02785 GMC family oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: Oxidoreductase, GMC family protein; FAD dependent oxidoreductase complement(2496325..2498031) Muricauda ruestringensis DSM 13258 11055124 YP_004788739.1 CDS Murru_2279 NC_015945.1 2498101 2498817 R PFAM: NUDIX domain; InterPro IPR000086; KEGG: sli:Slin_0652 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: Putative uncharacterized protein; NUDIX hydrolase complement(2498101..2498817) Muricauda ruestringensis DSM 13258 11055125 YP_004788740.1 CDS Murru_2280 NC_015945.1 2499506 2502709 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: zpr:ZPR_1629 TonB-dependent receptor Plug domain protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative uncharacterized protein; TonB-dependent receptor plug 2499506..2502709 Muricauda ruestringensis DSM 13258 11055126 YP_004788741.1 CDS Murru_2281 NC_015945.1 2502714 2504417 D PFAM: SusD family; InterPro IPR012944; KEGG: zpr:ZPR_3072 putative outer membrane protein; PFAM: RagB/SusD; SPTR: Putative outer membrane protein; RagB/SusD domain-containing protein 2502714..2504417 Muricauda ruestringensis DSM 13258 11055127 YP_004788742.1 CDS Murru_2282 NC_015945.1 2504636 2508049 D PFAM: ASPIC and UnbV; FG-GAP repeat; InterPro IPR013517:IPR011519; KEGG: dfe:Dfer_4948 ASPIC/UnbV domain protein; PFAM: ASPIC/UnbV; FG-GAP; SPTR: Putative uncharacterized protein; ASPIC/UnbV domain-containing protein 2504636..2508049 Muricauda ruestringensis DSM 13258 11055128 YP_004788743.1 CDS Murru_2283 NC_015945.1 2508292 2509584 R PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; COGs: COG2195 Di- and tripeptidase; InterPro IPR002933:IPR011650; KEGG: sli:Slin_3913 peptidase M20; PFAM: Peptidase M20, dimerisation; Peptidase M20; SPTR: Peptidase M20; peptidase dimerization domain-containing protein complement(2508292..2509584) Muricauda ruestringensis DSM 13258 11055129 YP_004788744.1 CDS Murru_2284 NC_015945.1 2509660 2510538 R PFAM: Aminotransferase class IV; TIGRFAM: D-amino acid aminotransferase; COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: rbi:RB2501_10712 aminotransferase, class IV; PFAM: Aminotransferase, class IV; PRIAM: D-amino-acid transaminase; SPTR: Aminotransferase, class IV; D-amino-acid transaminase complement(2509660..2510538) Muricauda ruestringensis DSM 13258 11055130 YP_004788745.1 CDS Murru_2285 NC_015945.1 2511059 2511580 D PFAM: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); COGs: COG4502 conserved hypothetical protein; InterPro IPR010708; KEGG: rbi:RB2501_10642 5'(3')-deoxyribonucleotidase; SPTR: 5'(3')-deoxyribonucleotidase; 5'(3')-deoxyribonucleotidase 2511059..2511580 Muricauda ruestringensis DSM 13258 11055131 YP_004788746.1 CDS Murru_2286 NC_015945.1 2511593 2512315 D PFAM: Phospholipase/Carboxylesterase; COGs: COG4099 peptidase; KEGG: fbc:FB2170_09811 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2511593..2512315 Muricauda ruestringensis DSM 13258 11055132 YP_004788747.1 CDS Murru_2287 NC_015945.1 2512321 2513043 D PFAM: D-ala-D-ala dipeptidase; COGs: COG2173 D-alanyl-D-alanine dipeptidase; InterPro IPR000755; KEGG: fbc:FB2170_14738 putative peptidase; PFAM: Peptidase M15D, VanX D-ala-D-ala dipeptidase; SPTR: Probable peptidase; peptidase M15D vanX D-ala-D-ala dipeptidase 2512321..2513043 Muricauda ruestringensis DSM 13258 11055133 YP_004788748.1 CDS Murru_2288 NC_015945.1 2513040 2514218 R KEGG: fbc:FB2170_09831 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2513040..2514218) Muricauda ruestringensis DSM 13258 11055134 YP_004788749.1 CDS Murru_2289 NC_015945.1 2514226 2515326 R PFAM: Domain of unknown function DUF20; COGs: COG0628 permease; InterPro IPR002549; KEGG: rbi:RB2501_13204 hypothetical protein; PFAM: Uncharacterised protein family UPF0118; SPTR: Putative uncharacterized protein; hypothetical protein complement(2514226..2515326) Muricauda ruestringensis DSM 13258 11055135 YP_004788750.1 CDS Murru_2290 NC_015945.1 2515330 2515926 R KEGG: fbc:FB2170_09841 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2515330..2515926) Muricauda ruestringensis DSM 13258 11055136 YP_004788751.1 CDS Murru_2291 NC_015945.1 2516047 2516754 R PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; COGs: COG1385 conserved hypothetical protein; InterPro IPR006700; KEGG: fbc:FB2170_09846 hypothetical protein; PFAM: Ribosomal RNA small subunit methyltransferase E; SPTR: Putative uncharacterized protein; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; ribosomal RNA small subunit methyltransferase E complement(2516047..2516754) Muricauda ruestringensis DSM 13258 11055137 YP_004788752.1 CDS Murru_2292 NC_015945.1 2516892 2517920 R PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family; COGs: COG0533 Metal-dependent protease with possible chaperone activity; HAMAP: Peptidase M22, O-sialoglycoprotein peptidase; InterPro IPR022450:IPR017861:IPR000905; KEGG: fbc:FB2170_09856 putative glycoprotease; PFAM: Peptidase M22, glycoprotease; PRIAM: O-sialoglycoprotein endopeptidase; SPTR: Probable O-sialoglycoprotein endopeptidase; TIGRFAM: Peptidase M22, O-sialoglycoprotein peptidase; Peptidase M22, glycoprotease, subgroup; O-sialoglycoprotein endopeptidase complement(2516892..2517920) Muricauda ruestringensis DSM 13258 11055138 YP_004788753.1 CDS Murru_2293 NC_015945.1 2517993 2522444 D PFAM: Family of unknown function (DUF490); InterPro IPR007452; KEGG: fbc:FB2170_09861 hypothetical protein; PFAM: Protein of unknown function DUF490; SPTR: Putative uncharacterized protein; hypothetical protein 2517993..2522444 Muricauda ruestringensis DSM 13258 11055139 YP_004788754.1 CDS Murru_2294 NC_015945.1 2522589 2523575 D PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase; COGs: COG0205 6-phosphofructokinase; HAMAP: Phosphofructokinase; InterPro IPR012828:IPR022953:IPR000023; KEGG: fbc:FB2170_09866 6-phosphofructokinase; PFAM: Phosphofructokinase domain; PRIAM: 6-phosphofructokinase; SPTR: 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; 6-phosphofructokinase 2522589..2523575 Muricauda ruestringensis DSM 13258 11055140 YP_004788755.1 CDS Murru_2295 NC_015945.1 2523598 2524599 D PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR020828:IPR006424:IPR020829; KEGG: fbc:FB2170_09871 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; SPTR: Glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; glyceraldehyde-3-phosphate dehydrogenase 2523598..2524599 Muricauda ruestringensis DSM 13258 11055141 YP_004788756.1 CDS Murru_2296 NC_015945.1 2524674 2525525 D PFAM: BadF/BadG/BcrA/BcrD ATPase family; COGs: COG2971 N-acetylglucosamine kinase; KEGG: fbc:FB2170_09876 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2524674..2525525 Muricauda ruestringensis DSM 13258 11055142 YP_004788757.1 CDS Murru_2297 NC_015945.1 2525518 2525898 R PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006056:IPR006175; KEGG: rbi:RB2501_13249 hypothetical protein; PFAM: Endoribonuclease L-PSP; SPTR: Putative uncharacterized protein; TIGRFAM: YjgF-like protein; endoribonuclease L-PSP complement(2525518..2525898) Muricauda ruestringensis DSM 13258 11055143 YP_004788758.1 CDS Murru_2298 NC_015945.1 2525946 2528639 R COGs: COG1452 Organic solvent tolerance protein OstA; KEGG: fbc:FB2170_09886 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2525946..2528639) Muricauda ruestringensis DSM 13258 11055144 YP_004788759.1 CDS Murru_2299 NC_015945.1 2528770 2529960 D PFAM: N-acetylmuramoyl-L-alanine amidase; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: rbi:RB2501_13259 putative N-acetylmuramoyl-L-alanine amidase AmiA; PFAM: Cell wall hydrolase/autolysin, catalytic; PRIAM: N-acetylmuramoyl-L-alanine amidase; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: Putative N-acetylmuramoyl-L-alanine amidase amiA; N-acetylmuramoyl-L-alanine amidase 2528770..2529960 Muricauda ruestringensis DSM 13258 11055145 YP_004788760.1 CDS Murru_2300 NC_015945.1 2530026 2531012 D PFAM: mce related protein; COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: fbc:FB2170_09896 hypothetical protein; PFAM: Mammalian cell entry-related; SPTR: Putative uncharacterized protein; mammalian cell entry domain-containing protein 2530026..2531012 Muricauda ruestringensis DSM 13258 11055146 YP_004788761.1 CDS Murru_2301 NC_015945.1 2531013 2532338 D COGs: COG0247 Fe-S oxidoreductase; KEGG: fbc:FB2170_09901 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2531013..2532338 Muricauda ruestringensis DSM 13258 11055147 YP_004788762.1 CDS Murru_2302 NC_015945.1 2532349 2533140 D PFAM: Cysteine-rich domain; COGs: COG0247 Fe-S oxidoreductase; InterPro IPR004017; KEGG: gfo:GFO_1636 cysteine-rich domain-containing protein; PFAM: Cysteine-rich domain; SPTR: Fe-S oxidoreductase, possible dehydrogenase subunit; hypothetical protein 2532349..2533140 Muricauda ruestringensis DSM 13258 11055148 YP_004788763.1 CDS Murru_2303 NC_015945.1 2533198 2533680 D KEGG: fbc:FB2170_09911 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2533198..2533680 Muricauda ruestringensis DSM 13258 11055149 YP_004788764.1 CDS Murru_2304 NC_015945.1 2533880 2536792 D PFAM: Glycosyl hydrolase family 3 N terminal domain; Beta-lactamase; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764:IPR001466; KEGG: fbc:FB2170_09916 beta-N-acetylglucosaminidase; PFAM: Glycoside hydrolase, family 3, N-terminal; Beta-lactamase-related; PRIAM: Beta-N-acetylhexosaminidase; SPTR: Beta-N-acetylglucosaminidase; beta-N-acetylhexosaminidase 2533880..2536792 Muricauda ruestringensis DSM 13258 11055150 YP_004788765.1 CDS Murru_2305 NC_015945.1 2536822 2537964 D PFAM: Glycosyl transferases group 1; TIGRFAM: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: fbc:FB2170_09921 group 1 family glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase group 1; group 1 glycosyl transferase 2536822..2537964 Muricauda ruestringensis DSM 13258 11055151 YP_004788766.1 CDS Murru_2306 NC_015945.1 2538060 2538428 D KEGG: fbc:FB2170_09926 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2538060..2538428 Muricauda ruestringensis DSM 13258 11055152 YP_004788767.1 CDS Murru_2307 NC_015945.1 2538569 2539726 D PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR006665; KEGG: fbc:FB2170_09931 OmpA/MotB family outer membrane protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: Outer membrane protein, OmpA/MotB family; OmpA/MotB domain-containing protein 2538569..2539726 Muricauda ruestringensis DSM 13258 11055153 YP_004788768.1 CDS Murru_2308 NC_015945.1 2539790 2540236 D PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: coc:Coch_0731 transcriptional regulator, BadM/Rrf2 family; PFAM: Transcription regulator Rrf2; SPTR: Rrf2 family protein; TIGRFAM: Transcription regulator Rrf2; BadM/Rrf2 family transcriptional regulator 2539790..2540236 Muricauda ruestringensis DSM 13258 11055154 YP_004788769.1 CDS Murru_2309 NC_015945.1 2540499 2545289 D PFAM: Di-glucose binding within endoplasmic reticulum; PKD domain; COGs: COG3291 FOG: PKD repeat; InterPro IPR022409:IPR000601; KEGG: fbc:FB2170_12586 hypothetical protein; PFAM: PKD domain; SMART: PKD/Chitinase domain; SPTR: Putative uncharacterized protein; PKD domain-containing protein 2540499..2545289 Muricauda ruestringensis DSM 13258 11055155 YP_004788770.1 CDS Murru_2310 NC_015945.1 2545305 2546981 D TIGRFAM: conserved hypothetical protein, HNE_0200 family; KEGG: fbc:FB2170_12591 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2545305..2546981 Muricauda ruestringensis DSM 13258 11055156 YP_004788771.1 CDS Murru_2311 NC_015945.1 2547202 2547609 R PFAM: Cytochrome c; KEGG: fbc:FB2170_12596 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2547202..2547609) Muricauda ruestringensis DSM 13258 11055157 YP_004788772.1 CDS Murru_2312 NC_015945.1 2547698 2548567 R KEGG: fbc:FB2170_12601 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2547698..2548567) Muricauda ruestringensis DSM 13258 11055158 YP_004788773.1 CDS Murru_2313 NC_015945.1 2548570 2548953 R KEGG: fbc:FB2170_12606 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2548570..2548953) Muricauda ruestringensis DSM 13258 11055159 YP_004788774.1 CDS Murru_2314 NC_015945.1 2549150 2550301 R PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: fbc:FB2170_09956 WlaE protein; PFAM: Glycosyl transferase, group 1; SPTR: Wlae protein; group 1 glycosyl transferase complement(2549150..2550301) Muricauda ruestringensis DSM 13258 11055160 YP_004788775.1 CDS Murru_2315 NC_015945.1 2550379 2551449 R KEGG: fbc:FB2170_09986 putative hexapeptide transferase family protein; SPTR: Putative hexapeptide transferase family protein; putative hexapeptide transferase family protein complement(2550379..2551449) Muricauda ruestringensis DSM 13258 11055161 YP_004788776.1 CDS Murru_2316 NC_015945.1 2551550 2552479 R KEGG: fbc:FB2170_09966 hypothetical protein; SPTR: Glycosyltransferase; hypothetical protein complement(2551550..2552479) Muricauda ruestringensis DSM 13258 11055162 YP_004788777.1 CDS Murru_2317 NC_015945.1 2552543 2553661 R PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: fbc:FB2170_09961 lipopolysaccharide biosynthesis; PFAM: Glycosyl transferase, group 1; SPTR: Lipopolysaccharide biosynthesis; group 1 glycosyl transferase complement(2552543..2553661) Muricauda ruestringensis DSM 13258 11055163 YP_004788778.1 CDS Murru_2318 NC_015945.1 2553757 2555118 R PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN; COGs: COG0728 membrane protein putative virulence factor; InterPro IPR004268; KEGG: rbi:RB2501_13404 virulence factor MviN-like protein; PFAM: Flagellin assembly, membrane protein MviN; SPTR: Virulence factor MVIN-like protein; virulence factor MVIN family protein complement(2553757..2555118) Muricauda ruestringensis DSM 13258 11055164 YP_004788779.1 CDS Murru_2319 NC_015945.1 2555127 2556317 R PFAM: O-Antigen ligase; InterPro IPR007016; KEGG: fbc:FB2170_09971 hypothetical protein; PFAM: O-antigen ligase-related; SPTR: Putative uncharacterized protein; O-antigen polymerase complement(2555127..2556317) Muricauda ruestringensis DSM 13258 11055165 YP_004788780.1 CDS Murru_2320 NC_015945.1 2556317 2557387 R PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: rbi:RB2501_13414 WlaC protein; PFAM: Glycosyl transferase, group 1; SPTR: Wlac protein; group 1 glycosyl transferase complement(2556317..2557387) Muricauda ruestringensis DSM 13258 11055166 YP_004788781.1 CDS Murru_2321 NC_015945.1 2557390 2558337 R KEGG: fbc:FB2170_09996 glycosyltransferase; SPTR: Glycosyltransferase; glycosyltransferase complement(2557390..2558337) Muricauda ruestringensis DSM 13258 11055167 YP_004788782.1 CDS Murru_2322 NC_015945.1 2558464 2560212 R KEGG: fbc:FB2170_10001 pectate lyase; SPTR: Pectate lyase; pectate lyase complement(2558464..2560212) Muricauda ruestringensis DSM 13258 11055168 YP_004788783.1 CDS Murru_2323 NC_015945.1 2561121 2562146 R PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: fbc:FB2170_10021 putative UDP-glucuronic acid epimerase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: UDP-glucuronate 4-epimerase; SPTR: Putative UDP-glucuronic acid epimerase; UDP-glucuronate 4-epimerase complement(2561121..2562146) Muricauda ruestringensis DSM 13258 11055169 YP_004788784.1 CDS Murru_2324 NC_015945.1 2562180 2563292 R PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: sta:STHERM_c15680 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1 family; group 1 glycosyl transferase complement(2562180..2563292) Muricauda ruestringensis DSM 13258 11055170 YP_004788785.1 CDS Murru_2325 NC_015945.1 2563377 2564780 R PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR017476:IPR001732:IPR014026:IPR014027; KEGG: fbc:FB2170_10026 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: UDP-glucose 6-dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; nucleotide sugar dehydrogenase complement(2563377..2564780) Muricauda ruestringensis DSM 13258 11055171 YP_004788786.1 CDS Murru_2326 NC_015945.1 2565310 2566083 D PFAM: Polysaccharide biosynthesis/export protein; SLBB domain; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR003715:IPR019554; KEGG: fbc:FB2170_10041 BexD/CtrA/VexA family polysaccharide export protein; PFAM: Polysaccharide export protein; Soluble ligand binding domain; SPTR: Polysaccharide export protein, BexD/CtrA/VexA family; polysaccharide export protein 2565310..2566083 Muricauda ruestringensis DSM 13258 11055172 YP_004788787.1 CDS Murru_2327 NC_015945.1 2566114 2568501 D PFAM: Chain length determinant protein; CobQ/CobB/MinD/ParA nucleotide binding domain; TIGRFAM: capsular exopolysaccharide family; COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR005702:IPR003856; KEGG: rbi:RB2501_13484 tyrosine-protein kinase; PFAM: Lipopolysaccharide biosynthesis; SPTR: Tyrosine-protein kinase; TIGRFAM: Exopolysaccharide synthesis protein; capsular exopolysaccharide family protein 2566114..2568501 Muricauda ruestringensis DSM 13258 11055173 YP_004788788.1 CDS Murru_2328 NC_015945.1 2568583 2569446 D PFAM: Core-2/I-Branching enzyme; InterPro IPR003406; KEGG: ele:Elen_2434 glycosyl transferase family 14; PFAM: Glycosyl transferase, family 14; SPTR: Putative uncharacterized protein; glycosyl transferase family protein 2568583..2569446 Muricauda ruestringensis DSM 13258 11055174 YP_004788789.1 CDS Murru_2329 NC_015945.1 2569813 2579076 D PFAM: Kelch motif; Di-glucose binding within endoplasmic reticulum; PKD domain; Putative Ig domain; COGs: COG3291 FOG: PKD repeat; InterPro IPR006652:IPR022409:IPR008009:IPR000601; KEGG: rbi:RB2501_13489 putative secreted protein; PFAM: PKD domain; Putative Ig; Kelch repeat type 1; SMART: PKD/Chitinase domain; Kelch repeat type 1; SPTR: Putative secreted protein; PKD domain-containing protein 2569813..2579076 Muricauda ruestringensis DSM 13258 11055175 YP_004788790.1 CDS Murru_2330 NC_015945.1 2579414 2580784 R PFAM: Bacterial sugar transferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR017475:IPR003362; KEGG: fps:FP1244 glycosyl transferase; PFAM: Bacterial sugar transferase; SPTR: Probable glycosyl transferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase complement(2579414..2580784) Muricauda ruestringensis DSM 13258 11055176 YP_004788791.1 CDS Murru_2331 NC_015945.1 2580985 2581887 D KEGG: fbc:FB2170_10036 putative capsular polysaccharide biosynthesis protein; SPTR: Putative capsular polysaccharide biosynthesis protein; hypothetical protein 2580985..2581887 Muricauda ruestringensis DSM 13258 11055177 YP_004788792.1 CDS Murru_2332 NC_015945.1 2582449 2589639 D PFAM: Kelch motif; Di-glucose binding within endoplasmic reticulum; PKD domain; Putative Ig domain; COGs: COG3291 FOG: PKD repeat; InterPro IPR006652:IPR022409:IPR008009:IPR000601; KEGG: rbi:RB2501_13489 putative secreted protein; PFAM: PKD domain; Putative Ig; Kelch repeat type 1; SMART: PKD/Chitinase domain; Kelch repeat type 1; SPTR: Putative secreted protein; PKD domain-containing protein 2582449..2589639 Muricauda ruestringensis DSM 13258 11055178 YP_004788793.1 CDS Murru_2333 NC_015945.1 2589906 2590649 R COGs: COG4464 Capsular polysaccharide biosynthesis protein; KEGG: fbc:FB2170_10121 capsular polysaccharide biosynthesis protein; SPTR: Capsular polysaccharide biosynthesis protein, putative; capsular polysaccharide biosynthesis protein complement(2589906..2590649) Muricauda ruestringensis DSM 13258 11055179 YP_004788794.1 CDS Murru_2334 NC_015945.1 2590911 2592182 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: rbi:RB2501_02365 two-component system sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Two-component system sensor histidine kinase; integral membrane sensor signal transduction histidine kinase 2590911..2592182 Muricauda ruestringensis DSM 13258 11055180 YP_004788795.1 CDS Murru_2335 NC_015945.1 2592175 2592876 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: rbi:RB2501_02360 two-component system response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SPTR: Two-component system, transcriptional regulatory protein; two component winged helix family transcriptional regulator 2592175..2592876 Muricauda ruestringensis DSM 13258 11055181 YP_004788796.1 CDS Murru_2336 NC_015945.1 2593241 2594005 D KEGG: gfo:GFO_2193 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2593241..2594005 Muricauda ruestringensis DSM 13258 11055182 YP_004788797.1 CDS Murru_2337 NC_015945.1 2594090 2596645 D PFAM: Peptidase family M1; Domain of unknown function (DUF3358); COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: fjo:Fjoh_1348 peptidase M1, membrane alanine aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; PRIAM: Leucyl aminopeptidase; SPTR: Putative aminopeptidase; leucyl aminopeptidase 2594090..2596645 Muricauda ruestringensis DSM 13258 11055183 YP_004788798.1 CDS Murru_2338 NC_015945.1 2596793 2597473 D SPTR: Putative uncharacterized protein; hypothetical protein 2596793..2597473 Muricauda ruestringensis DSM 13258 11055184 YP_004788799.1 CDS Murru_2339 NC_015945.1 2597542 2598450 D SPTR: Putative uncharacterized protein; hypothetical protein 2597542..2598450 Muricauda ruestringensis DSM 13258 11055185 YP_004788800.1 CDS Murru_2340 NC_015945.1 2598872 2599246 R PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; KEGG: lby:Lbys_0800 transcription regulator; SPTR: Probable transcription regulator; transcriptional regulator complement(2598872..2599246) Muricauda ruestringensis DSM 13258 11055186 YP_004788801.1 CDS Murru_2341 NC_015945.1 2599326 2600234 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG0492 Thioredoxin reductase; InterPro IPR013027; KEGG: zpr:ZPR_2200 alkyl hydroperoxide reductase, F52a subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SPTR: Alkyl hydroperoxide reductase, F52a subunit; FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2599326..2600234 Muricauda ruestringensis DSM 13258 11055187 YP_004788802.1 CDS Murru_2342 NC_015945.1 2600244 2600630 D PFAM: MerC mercury resistance protein; KEGG: cpi:Cpin_2905 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2600244..2600630 Muricauda ruestringensis DSM 13258 11055188 YP_004788803.1 CDS Murru_2343 NC_015945.1 2600734 2601195 R hypothetical protein complement(2600734..2601195) Muricauda ruestringensis DSM 13258 11055189 YP_004788804.1 CDS Murru_2344 NC_015945.1 2601267 2601668 R hypothetical protein complement(2601267..2601668) Muricauda ruestringensis DSM 13258 11055190 YP_004788805.1 CDS Murru_2345 NC_015945.1 2601776 2602852 R PFAM: Trypsin; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001254; KEGG: bth:BT_0765 putative protease; PFAM: Peptidase S1/S6, chymotrypsin/Hap; SPTR: Putative protease; peptidase S1 and S6 chymotrypsin/Hap complement(2601776..2602852) Muricauda ruestringensis DSM 13258 11055191 YP_004788806.1 CDS Murru_2346 NC_015945.1 2602870 2604042 R KEGG: bth:BT_0764 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2602870..2604042) Muricauda ruestringensis DSM 13258 11055192 YP_004788807.1 CDS Murru_2347 NC_015945.1 2604212 2605279 R PFAM: TAT (twin-arginine translocation) pathway signal sequence; LD-carboxypeptidase; COGs: COG1619 conserved hypothetical protein; InterPro IPR019546:IPR003507; KEGG: pat:Patl_4176 peptidase U61, LD-carboxypeptidase A; PFAM: Peptidase S66, LD-carboxypeptidase A; Twin-arginine translocation pathway, signal sequence, bacterial/archaeal; SPTR: Peptidase U61 LD-carboxypeptidase A; peptidase U61 LD-carboxypeptidase A complement(2604212..2605279) Muricauda ruestringensis DSM 13258 11055193 YP_004788808.1 CDS Murru_2348 NC_015945.1 2605416 2606735 R KEGG: fbc:FB2170_00540 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2605416..2606735) Muricauda ruestringensis DSM 13258 11055194 YP_004788809.1 CDS Murru_2349 NC_015945.1 2606850 2609297 R PFAM: Zinc carboxypeptidase; InterPro IPR000834; KEGG: fbc:FB2170_15896 zinc-dependent carboxypeptidase domain-conatining protein; PFAM: Peptidase M14, carboxypeptidase A; SMART: Peptidase M14, carboxypeptidase A; SPTR: Secreted protein containing N-terminal zinc-dependent carboxypeptidase related domain, putative; peptidase M14 carboxypeptidase A complement(2606850..2609297) Muricauda ruestringensis DSM 13258 11055195 YP_004788810.1 CDS Murru_2350 NC_015945.1 2609457 2611061 D PFAM: Uncharacterized protein conserved in bacteria (DUF2317); TIGRFAM: bacillithiol biosynthesis cysteine-adding enzyme BshC; COGs: COG4365 conserved hypothetical protein; HAMAP: Uncharacterised protein family UPF0747; InterPro IPR011199; KEGG: fbc:FB2170_15891 hypothetical protein; PFAM: Uncharacterised protein family UPF0747; SPTR: UPF0747 protein FB2170_15891; hypothetical protein 2609457..2611061 Muricauda ruestringensis DSM 13258 11055196 YP_004788811.1 CDS Murru_2351 NC_015945.1 2611282 2611941 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; beta-phosphoglucomutase; beta-phosphoglucomutase family hydrolase; COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR010972:IPR010976:IPR006402:IPR005834; KEGG: hor:Hore_00430 beta-phosphoglucomutase; PFAM: Haloacid dehalogenase-like hydrolase; PRIAM: Beta-phosphoglucomutase; SPTR: Beta-phosphoglucomutase; TIGRFAM: Beta-phosphoglucomutase; Beta-phosphoglucomutase hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; beta-phosphoglucomutase complement(2611282..2611941) Muricauda ruestringensis DSM 13258 11055197 YP_004788812.1 CDS Murru_2352 NC_015945.1 2612149 2613681 D PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; NAD synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; COGs: COG0519 GMP synthase PP-ATPase domain/subunit; HAMAP: GMP synthase; InterProIPR004739:IPR001674:IPR022955:IPR000991:IPR 004506; KEGG: fbc:FB2170_15866 bifunctional GMP synthase/glutamine amidotransferase protein; PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA-specific 2-thiouridylase; PRIAM: GMP synthase (glutamine-hydrolyzing); SPTR: GMP synthase [glutamine-hydrolyzing]; TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; GMP synthase 2612149..2613681 Muricauda ruestringensis DSM 13258 11055198 YP_004788813.1 CDS Murru_2353 NC_015945.1 2613678 2615864 D PFAM: Receptor family ligand binding region; LysM domain; InterPro IPR002482:IPR018392; KEGG: fbc:FB2170_15861 LysM-repeat-containing protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: LysM-repeat protein; peptidoglycan-binding lysin domain-containing protein 2613678..2615864 Muricauda ruestringensis DSM 13258 11055199 YP_004788814.1 CDS Murru_2354 NC_015945.1 2615842 2616246 D PFAM: OsmC-like protein; COGs: COG1765 redox protein regulator of disulfide bond formation; InterPro IPR003718; KEGG: cat:CA2559_00995 hypothetical protein; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: Putative uncharacterized protein; OsmC family protein 2615842..2616246 Muricauda ruestringensis DSM 13258 11055200 YP_004788815.1 CDS Murru_2355 NC_015945.1 2616234 2616767 D KEGG: fbc:FB2170_15856 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2616234..2616767 Muricauda ruestringensis DSM 13258 11055201 YP_004788816.1 CDS Murru_2356 NC_015945.1 2616885 2617079 D hypothetical protein 2616885..2617079 Muricauda ruestringensis DSM 13258 11055202 YP_004788817.1 CDS Murru_2357 NC_015945.1 2617130 2617615 R hypothetical protein complement(2617130..2617615) Muricauda ruestringensis DSM 13258 11055203 YP_004788818.1 CDS Murru_2358 NC_015945.1 2617612 2618475 R PFAM: Xylose isomerase-like TIM barrel; COGs: COG3622 Hydroxypyruvate isomerase; InterPro IPR006311:IPR012307; KEGG: fbc:FB2170_15851 hypothetical protein; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Putative uncharacterized protein; xylose isomerase domain-containing protein complement(2617612..2618475) Muricauda ruestringensis DSM 13258 11055204 YP_004788819.1 CDS Murru_2359 NC_015945.1 2618519 2618761 D COGs: COG3530 conserved hypothetical protein; KEGG: fbc:FB2170_15846 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 2618519..2618761 Muricauda ruestringensis DSM 13258 11055205 YP_004788820.1 CDS Murru_2360 NC_015945.1 2618811 2620445 D PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase; COGs: COG0504 CTP synthase (UTP-ammonia lyase); HAMAP: CTP synthase; InterPro IPR004468:IPR017456:IPR000991; KEGG: fbc:FB2170_15841 CTP synthetase; PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; PRIAM: CTP synthase; SPTR: CTP synthase; TIGRFAM: CTP synthase; CTP synthase 2618811..2620445 Muricauda ruestringensis DSM 13258 11055206 YP_004788821.1 CDS Murru_2361 NC_015945.1 2620512 2622380 D PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain; COGs: COG0706 Preprotein translocase subunit YidC; HAMAP: Membrane insertion protein, OxaA/YidC, bacterial; InterPro IPR019998:IPR001708; KEGG: fbc:FB2170_15836 putative inner membrane protein translocase component YidC; PFAM: Membrane insertion protein, OxaA/YidC; SPTR: Membrane protein oxaA; TIGRFAM: Membrane insertion protein, OxaA/YidC; Membrane insertion protein, OxaA/YidC, bacterial; membrane protein OxaA 2620512..2622380 Muricauda ruestringensis DSM 13258 11055207 YP_004788822.1 CDS Murru_2362 NC_015945.1 2622656 2624524 R PFAM: Fasciclin domain; COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: fbc:FB2170_07619 putative adhesion lipoprotein; PFAM: FAS1 domain; SMART: FAS1 domain; SPTR: Putative adhesion lipoprotein; beta-Ig-H3/fasciclin complement(2622656..2624524) Muricauda ruestringensis DSM 13258 11055208 YP_004788823.1 CDS Murru_2363 NC_015945.1 2624727 2625917 D PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; HAMAP: tRNA-specific 2-thiouridylase; InterPro IPR004506; KEGG: fbc:FB2170_15813 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA-specific 2-thiouridylase; SPTR: tRNA-specific 2-thiouridylase mnmA; TIGRFAM: tRNA-specific 2-thiouridylase; tRNA-specific 2-thiouridylase mnmA 2624727..2625917 Muricauda ruestringensis DSM 13258 11055209 YP_004788824.1 CDS Murru_2364 NC_015945.1 2625972 2626913 D PFAM: 2-nitropropane dioxygenase; COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136; KEGG: fbc:FB2170_15808 putative dioxygenase; PFAM: 2-nitropropane dioxygenase, NPD; SPTR: Putative dioxygenase; 2-nitropropane dioxygenase 2625972..2626913 Muricauda ruestringensis DSM 13258 11055210 YP_004788825.1 CDS Murru_2365 NC_015945.1 2626963 2627436 D KEGG: rbi:RB2501_04460 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2626963..2627436 Muricauda ruestringensis DSM 13258 11055211 YP_004788826.1 CDS Murru_2366 NC_015945.1 2627484 2628815 R PFAM: Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: fbc:FB2170_15553 putative transmembrane protein; PFAM: Domain of unknown function DUF58; SPTR: Putative transmembrane protein; hypothetical protein complement(2627484..2628815) Muricauda ruestringensis DSM 13258 11055212 YP_004788827.1 CDS Murru_2367 NC_015945.1 2628818 2629801 R PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0714 MoxR-like ATPase; InterPro IPR011703; KEGG: fbc:FB2170_15548 magnesium chelatase subunit I; PFAM: ATPase, AAA-3; SPTR: Magnesium chelatase subunit I; ATPase complement(2628818..2629801) Muricauda ruestringensis DSM 13258 11055213 YP_004788828.1 CDS Murru_2368 NC_015945.1 2629791 2631005 R KEGG: fbc:FB2170_15543 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2629791..2631005) Muricauda ruestringensis DSM 13258 11055214 YP_004788829.1 CDS Murru_2369 NC_015945.1 2630998 2631729 R KEGG: fbc:FB2170_15538 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2630998..2631729) Muricauda ruestringensis DSM 13258 11055215 YP_004788830.1 CDS Murru_2370 NC_015945.1 2631730 2632623 R KEGG: fbc:FB2170_15533 hypothetical protein; SPTR: Hypothetical membrane spanning protein; hypothetical protein complement(2631730..2632623) Muricauda ruestringensis DSM 13258 11055216 YP_004788831.1 CDS Murru_2371 NC_015945.1 2632607 2633578 R PFAM: Integral membrane protein DUF95; COGs: COG1300 membrane protein; InterPro IPR002798; KEGG: fbc:FB2170_15528 hypothetical protein; PFAM: Protein of unknown function DUF95, transmembrane; SPTR: Putative uncharacterized protein; hypothetical protein complement(2632607..2633578) Muricauda ruestringensis DSM 13258 11055217 YP_004788832.1 CDS Murru_2372 NC_015945.1 2633614 2634330 D PFAM: RDD family; COGs: COG1714 membrane protein/domain; InterPro IPR010432; KEGG: fbc:FB2170_15523 putative transmembrane protein; PFAM: RDD; SPTR: Putative transmembrane protein; RDD domain-containing protein 2633614..2634330 Muricauda ruestringensis DSM 13258 11055218 YP_004788833.1 CDS Murru_2373 NC_015945.1 2634333 2634947 D PFAM: UPF0126 domain; COGs: COG2860 membrane protein; InterPro IPR005115; KEGG: fbc:FB2170_15518 hypothetical protein; PFAM: Uncharacterised protein family UPF0126; SPTR: Putative uncharacterized protein; hypothetical protein 2634333..2634947 Muricauda ruestringensis DSM 13258 11055219 YP_004788834.1 CDS Murru_2374 NC_015945.1 2635103 2636248 D KEGG: rbi:RB2501_02375 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2635103..2636248 Muricauda ruestringensis DSM 13258 11055220 YP_004788835.1 CDS Murru_2375 NC_015945.1 2636266 2636757 D KEGG: ant:Arnit_0946 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2636266..2636757 Muricauda ruestringensis DSM 13258 11055221 YP_004788836.1 CDS Murru_2376 NC_015945.1 2636725 2637444 R PFAM: Dienelactone hydrolase family; COGs: COG0412 Dienelactone hydrolase; InterPro IPR002925; KEGG: fbc:FB2170_00660 dienelactone hydrolase family protein; PFAM: Dienelactone hydrolase; SPTR: Dienelactone hydrolase family protein; dienelactone hydrolase complement(2636725..2637444) Muricauda ruestringensis DSM 13258 11055222 YP_004788837.1 CDS Murru_2377 NC_015945.1 2637499 2638215 R PFAM: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130; KEGG: rbi:RB2501_12597 peptidylprolyl isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; SPTR: Peptidyl-prolyl cis-trans isomerase; cyclophilin type peptidyl-prolyl cis-trans isomerase complement(2637499..2638215) Muricauda ruestringensis DSM 13258 11055223 YP_004788838.1 CDS Murru_2378 NC_015945.1 2638220 2638858 D PFAM: NUDIX domain; InterPro IPR000086; KEGG: fbc:FB2170_15508 NUDIX family hydrolase; PFAM: NUDIX hydrolase domain; SPTR: Hydrolase, NUDIX family protein; NUDIX hydrolase 2638220..2638858 Muricauda ruestringensis DSM 13258 11055224 YP_004788839.1 CDS Murru_2379 NC_015945.1 2638899 2639720 D PFAM: Acyltransferase; InterPro IPR002123; KEGG: fbc:FB2170_15503 hypothetical protein; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Putative uncharacterized protein; phospholipid/glycerol acyltransferase 2638899..2639720 Muricauda ruestringensis DSM 13258 11055225 YP_004788840.1 CDS Murru_2380 NC_015945.1 2639717 2640361 R KEGG: gfo:GFO_1011 membrane protein; SPTR: Membrane protein; membrane protein complement(2639717..2640361) Muricauda ruestringensis DSM 13258 11055226 YP_004788841.1 CDS Murru_2381 NC_015945.1 2640364 2640858 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: fbc:FB2170_15493 ECF family RNA polymerase sigma factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(2640364..2640858) Muricauda ruestringensis DSM 13258 11055227 YP_004788842.1 CDS Murru_2382 NC_015945.1 2640932 2642359 R PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168:IPR002933:IPR011650; KEGG: fbc:FB2170_15488 hypothetical protein; PFAM: Peptidase M20, dimerisation; Peptidase M20; SPTR: Putative uncharacterized protein; TIGRFAM: Peptidase M20D, amidohydrolase; amidohydrolase complement(2640932..2642359) Muricauda ruestringensis DSM 13258 11055228 YP_004788843.1 CDS Murru_2383 NC_015945.1 2642452 2643768 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: fps:FP1931 NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: NADH dehydrogenase (ubiquinone); SPTR: Putative NADH dehydrogenase; NADH dehydrogenase (ubiquinone) 2642452..2643768 Muricauda ruestringensis DSM 13258 11055229 YP_004788844.1 CDS Murru_2384 NC_015945.1 2643864 2644115 D hypothetical protein 2643864..2644115 Muricauda ruestringensis DSM 13258 11055230 YP_004788845.1 CDS Murru_2385 NC_015945.1 2644157 2644378 D hypothetical protein 2644157..2644378 Muricauda ruestringensis DSM 13258 11055231 YP_004788846.1 CDS Murru_2386 NC_015945.1 2644385 2645332 R PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; TIGRFAM: tyrosine recombinase XerD; COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR011932:IPR004107:IPR002104; KEGG: fbc:FB2170_15478 putative tyrosine recombinase; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: Putative tyrosine recombinase; TIGRFAM: Tyrosine recombinase XerD; tyrosine recombinase XerC complement(2644385..2645332) Muricauda ruestringensis DSM 13258 11055232 YP_004788847.1 CDS Murru_2387 NC_015945.1 2645510 2646034 D KEGG: fbc:FB2170_15458 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2645510..2646034 Muricauda ruestringensis DSM 13258 11055233 YP_004788848.1 CDS Murru_2388 NC_015945.1 2646111 2646572 D KEGG: lby:Lbys_1414 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2646111..2646572 Muricauda ruestringensis DSM 13258 11055234 YP_004788849.1 CDS Murru_2389 NC_015945.1 2646677 2647189 D PFAM: Protein of unknown function (DUF3308); KEGG: fbc:FB2170_15473 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2646677..2647189 Muricauda ruestringensis DSM 13258 11055235 YP_004788850.1 CDS Murru_2390 NC_015945.1 2647226 2647693 D PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II; COGs: COG0757 3-dehydroquinate dehydratase II; InterPro IPR001874; KEGG: fbc:FB2170_15453 3-dehydroquinate dehydratase; PFAM: Dehydroquinase, class II; PRIAM: 3-dehydroquinate dehydratase; SPTR: 3-dehydroquinate dehydratase; TIGRFAM: Dehydroquinase, class II; 3-dehydroquinate dehydratase 2647226..2647693 Muricauda ruestringensis DSM 13258 11055236 YP_004788851.1 CDS Murru_2391 NC_015945.1 2647685 2647966 R TIGRFAM: integral membrane protein; KEGG: fbc:FB2170_15373 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2647685..2647966) Muricauda ruestringensis DSM 13258 11055237 YP_004788852.1 CDS Murru_2392 NC_015945.1 2647970 2649361 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR006258:IPR013027:IPR004099; KEGG: fbc:FB2170_15363 dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: Dihydrolipoyl dehydrogenase; SPTR: Dihydrolipoyl dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase complement(2647970..2649361) Muricauda ruestringensis DSM 13258 11055238 YP_004788853.1 CDS Murru_2393 NC_015945.1 2649481 2650017 R PFAM: Protein of unknown function (DUF1572); InterPro IPR011466; KEGG: fbc:FB2170_15358 hypothetical protein; PFAM: Protein of unknown function DUF1572; SPTR: Putative uncharacterized protein; hypothetical protein complement(2649481..2650017) Muricauda ruestringensis DSM 13258 11055239 YP_004788854.1 CDS Murru_2394 NC_015945.1 2650018 2650422 R PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; COGs: COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; InterPro IPR002579; KEGG: cat:CA2559_12453 SelR-like methionine sulfoxide reductase; PFAM: Methionine sulphoxide reductase B; PRIAM: Peptide-methionine (R)-S-oxide reductase; SPTR: SelR-like methionine sulfoxide reductase; TIGRFAM: Methionine sulphoxide reductase B; methionine-R-sulfoxide reductase complement(2650018..2650422) Muricauda ruestringensis DSM 13258 11055240 YP_004788855.1 CDS Murru_2395 NC_015945.1 2650439 2650930 R PFAM: SelR domain; TIGRFAM: methionine-R-sulfoxide reductase; COGs: COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase; InterPro IPR002579; KEGG: rbi:RB2501_12647 methionine sulfoxide reductase B; PFAM: Methionine sulphoxide reductase B; PRIAM: Peptide-methionine (R)-S-oxide reductase; SPTR: Methionine sulfoxide reductase B; TIGRFAM: Methionine sulphoxide reductase B; methionine-R-sulfoxide reductase complement(2650439..2650930) Muricauda ruestringensis DSM 13258 11055241 YP_004788856.1 CDS Murru_2396 NC_015945.1 2651042 2651620 R KEGG: cat:CA2559_12458 dihydrolipoamide dehydrogenase; SPTR: Dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase complement(2651042..2651620) Muricauda ruestringensis DSM 13258 11055242 YP_004788857.1 CDS Murru_2397 NC_015945.1 2651783 2653678 D PFAM: Alpha amylase, C-terminal all-beta domain; Carbohydrate-binding module 48 (Isoamylase N-terminal domain); Alpha amylase, catalytic domain; TIGRFAM: alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase; COGs: COG0296 1 4-alpha-glucan branching enzyme; HAMAP: 1,4-alpha-glucan-branching enzyme; InterProIPR006589:IPR006407:IPR004193:IPR006047:IPR 006048; KEGG: rbi:RB2501_12682 glycogen branching enzyme; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic domain; Alpha-amylase, C-terminal all beta; PRIAM: 1,4-alpha-glucan branching enzyme; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; SPTR: 1,4-alpha-glucan-branching enzyme; TIGRFAM: 1,4-alpha-glucan-branching enzyme; 1,4-alpha-glucan-branching protein 2651783..2653678 Muricauda ruestringensis DSM 13258 11055243 YP_004788858.1 CDS Murru_2398 NC_015945.1 2653775 2656174 D PFAM: Glycosyl hydrolases family 31; COGs: COG1501 Alpha-glucosidase family 31 of glycosyl hydrolase; InterPro IPR000322; KEGG: fbc:FB2170_15338 alpha-glucosidase; PFAM: Glycoside hydrolase, family 31; PRIAM: Alpha-glucosidase; SPTR: Alpha-glucosidase, family 31 of glycosyl hydrolase; Alpha-glucosidase 2653775..2656174 Muricauda ruestringensis DSM 13258 11055244 YP_004788859.1 CDS Murru_2399 NC_015945.1 2656213 2657022 D PFAM: Peptidase family M48; COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR001915; KEGG: fbc:FB2170_15333 hypothetical protein; PFAM: Peptidase M48; SPTR: Putative uncharacterized protein; peptidase M48 Ste24p 2656213..2657022 Muricauda ruestringensis DSM 13258 11055245 YP_004788860.1 CDS Murru_2400 NC_015945.1 2657182 2658504 D PFAM: Vacuole effluxer Atg22 like; COGs: COG2270 Permease of the major facilitator superfamily; KEGG: fbc:FB2170_15328 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2657182..2658504 Muricauda ruestringensis DSM 13258 11055246 YP_004788861.1 CDS Murru_2401 NC_015945.1 2658509 2659429 D PFAM: YdjC-like protein; COGs: COG3394 conserved hypothetical protein; InterPro IPR006879; KEGG: fjo:Fjoh_0046 YdjC family protein; PFAM: Uncharacterised protein family UPF0249/HpnK; SPTR: YdjC family protein; hypothetical protein 2658509..2659429 Muricauda ruestringensis DSM 13258 11055247 YP_004788862.1 CDS Murru_2402 NC_015945.1 2659503 2660228 R PFAM: Protein of unknown function (DUF2807); KEGG: fbc:FB2170_15323 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2659503..2660228) Muricauda ruestringensis DSM 13258 11055248 YP_004788863.1 CDS Murru_2403 NC_015945.1 2660262 2661359 R KEGG: fbc:FB2170_15318 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2660262..2661359) Muricauda ruestringensis DSM 13258 11055249 YP_004788864.1 CDS Murru_2404 NC_015945.1 2661340 2661897 R KEGG: fbc:FB2170_15313 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2661340..2661897) Muricauda ruestringensis DSM 13258 11055250 YP_004788865.1 CDS Murru_2405 NC_015945.1 2661900 2662457 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: fbc:FB2170_15308 hypothetical protein; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: Putative uncharacterized protein; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(2661900..2662457) Muricauda ruestringensis DSM 13258 11055251 YP_004788866.1 CDS Murru_2406 NC_015945.1 2662637 2665126 D PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La; COGs: COG0466 ATP-dependent Lon protease; InterProIPR003111:IPR003593:IPR004815:IPR003959:IPR 008269; KEGG: fbc:FB2170_15303 ATP-dependent protease; PFAM: Peptidase S16, Lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core; PRIAM: Endopeptidase La; SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; SPTR: ATP-dependent protease La; TIGRFAM: Peptidase S16, ATP-dependent protease La; anti-sigma H sporulation factor LonB 2662637..2665126 Muricauda ruestringensis DSM 13258 11055252 YP_004788867.1 CDS Murru_2407 NC_015945.1 2665234 2665932 D PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase; COGs: COG0283 Cytidylate kinase; HAMAP: Cytidylate kinase; InterPro IPR003136:IPR000623:IPR011994; KEGG: fbc:FB2170_15298 cytidylate kinase; PFAM: Cytidylate kinase domain; Shikimate kinase; SPTR: Cytidylate kinase; TIGRFAM: Cytidylate kinase; cytidylate kinase 2665234..2665932 Muricauda ruestringensis DSM 13258 11055253 YP_004788868.1 CDS Murru_2408 NC_015945.1 2665979 2666335 R PFAM: Helix-turn-helix; COGs: COG5499 transcription regulator containing HTH domain; InterPro IPR001387; KEGG: gfo:GFO_0922 HTH_3 family transcriptional regulator protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Predicted transcription regulator containing helix turn helix domain; XRE family transcriptional regulator complement(2665979..2666335) Muricauda ruestringensis DSM 13258 11055254 YP_004788869.1 CDS Murru_2409 NC_015945.1 2666339 2666632 R PFAM: Uncharacterized protein conserved in bacteria (DUF2136); COGs: COG4680 conserved hypothetical protein; InterPro IPR018669; KEGG: gfo:GFO_0923 hypothetical protein; PFAM: Protein of unknown function DUF2136; SPTR: Putative uncharacterized protein; hypothetical protein complement(2666339..2666632) Muricauda ruestringensis DSM 13258 11055255 YP_004788870.1 CDS Murru_2410 NC_015945.1 2666839 2668146 R PFAM: Predicted membrane protein (DUF2254); COGs: COG4325 membrane protein; InterPro IPR018723; KEGG: cyc:PCC7424_1901 hypothetical protein; PFAM: Protein of unknown function DUF2254, membrane; SPTR: Putative uncharacterized protein; hypothetical protein complement(2666839..2668146) Muricauda ruestringensis DSM 13258 11055256 YP_004788871.1 CDS Murru_2411 NC_015945.1 2668201 2668485 R KEGG: syp:SYNPCC7002_A0304 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2668201..2668485) Muricauda ruestringensis DSM 13258 11055257 YP_004788872.1 CDS Murru_2412 NC_015945.1 2668802 2669182 R PFAM: LysM domain; InterPro IPR002482:IPR018392; KEGG: rbi:RB2501_12754 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Putative uncharacterized protein; peptidoglycan-binding lysin domain-containing protein complement(2668802..2669182) Muricauda ruestringensis DSM 13258 11055258 YP_004788873.1 CDS Murru_2413 NC_015945.1 2669241 2671277 D PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1; COGs: COG0539 Ribosomal protein S1; InterPro IPR022967:IPR003029; KEGG: fbc:FB2170_15288 putative 30S ribosomal protein S1; PFAM: Ribosomal protein S1, RNA-binding domain; SMART: RNA-binding domain, S1; SPTR: Putative 30S ribosomal protein S1; RNA binding S1 domain-containing protein 2669241..2671277 Muricauda ruestringensis DSM 13258 11055259 YP_004788874.1 CDS Murru_2414 NC_015945.1 2671393 2671929 D PFAM: Phosphoribosyl transferase domain; COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; InterPro IPR000836; KEGG: fbc:FB2170_15243 pyrimidine regulatory protein PyrR; PFAM: Phosphoribosyltransferase; PRIAM: Uracil phosphoribosyltransferase; SPTR: Pyrimidine regulatory protein PyrR; uracil phosphoribosyltransferase 2671393..2671929 Muricauda ruestringensis DSM 13258 11055260 YP_004788875.1 CDS Murru_2415 NC_015945.1 2671936 2672862 D PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; HAMAP: Aspartate carbamoyltransferase, eukaryotic; InterPro IPR002082:IPR006132:IPR006131; KEGG: fbc:FB2170_15238 aspartate carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; PRIAM: Aspartate carbamoyltransferase; SPTR: Aspartate carbamoyltransferase; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; aspartate carbamoyltransferase 2671936..2672862 Muricauda ruestringensis DSM 13258 11055261 YP_004788876.1 CDS Murru_2416 NC_015945.1 2672866 2673198 D KEGG: fbc:FB2170_15233 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2672866..2673198 Muricauda ruestringensis DSM 13258 11055262 YP_004788877.1 CDS Murru_2417 NC_015945.1 2673195 2674103 D PFAM: Metallo-beta-lactamase superfamily; TIGRFAM: ribonuclease Z; COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; HAMAP: Ribonuclease Z; InterPro IPR013471:IPR001279; KEGG: fbc:FB2170_15228 ribonuclease Z; PFAM: Beta-lactamase-like; SPTR: Ribonuclease Z; ribonuclease Z 2673195..2674103 Muricauda ruestringensis DSM 13258 11055263 YP_004788878.1 CDS Murru_2418 NC_015945.1 2674232 2674879 D PFAM: Pyridoxamine 5'-phosphate oxidase; Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region; TIGRFAM: pyridoxamine-phosphate oxidase; COGs: COG0259 Pyridoxamine-phosphate oxidase; HAMAP: Pyridoxamine 5'-phosphate oxidase; InterPro IPR000659:IPR011576:IPR019576; KEGG: fbc:FB2170_15223 pyridoxamine 5-phosphate oxidase; PFAM: Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal; Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; PRIAM: Pyridoxal 5'-phosphate synthase; SPTR: Pyridoxine/pyridoxamine 5'-phosphate oxidase; TIGRFAM: Pyridoxamine 5'-phosphate oxidase; pyridoxine/pyridoxamine 5'-phosphate oxidase 2674232..2674879 Muricauda ruestringensis DSM 13258 11055264 YP_004788879.1 CDS Murru_2419 NC_015945.1 2674890 2675378 D PFAM: Phosphoglycerate mutase family; COGs: COG2062 Phosphohistidine phosphatase SixA; InterPro IPR013078; KEGG: fbc:FB2170_15218 phosphoglycerate mutase family domain-containing protein; PFAM: Histidine phosphatase superfamily, clade-1; SPTR: Phosphoglycerate mutase family domain protein; putative phosphohistidine phosphatase SixA 2674890..2675378 Muricauda ruestringensis DSM 13258 11055265 YP_004788880.1 CDS Murru_2420 NC_015945.1 2675379 2677454 D PFAM: Polyphosphate kinase; TIGRFAM: polyphosphate kinase 1; COGs: COG0855 Polyphosphate kinase; InterPro IPR003414; KEGG: rbi:RB2501_12794 polyphosphate kinase; PFAM: Polyphosphate kinase; PRIAM: Polyphosphate kinase; SPTR: Polyphosphate kinase; TIGRFAM: Polyphosphate kinase; polyphosphate kinase 1 2675379..2677454 Muricauda ruestringensis DSM 13258 11055266 YP_004788881.1 CDS Murru_2421 NC_015945.1 2677451 2678032 R PFAM: tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE); COGs: COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA; KEGG: rbi:RB2501_12809 putative tRNA-hydroxylase; PFAM: tRNA--hydroxylase; SPTR: Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA; tRNA-hydroxylase complement(2677451..2678032) Muricauda ruestringensis DSM 13258 11055267 YP_004788882.1 CDS Murru_2422 NC_015945.1 2678130 2678975 D KEGG: rbi:RB2501_12814 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2678130..2678975 Muricauda ruestringensis DSM 13258 11055268 YP_004788883.1 CDS Murru_2423 NC_015945.1 2678980 2679888 D PFAM: TatD related DNase; COGs: COG1099 metal-dependent hydrolase with the TIM-barrel fold; InterPro IPR001130; KEGG: rbi:RB2501_12819 hypothetical protein; PFAM: Deoxyribonuclease, TatD-related; SPTR: Putative uncharacterized protein; TatD-related deoxyribonuclease 2678980..2679888 Muricauda ruestringensis DSM 13258 11055269 YP_004788884.1 CDS Murru_2424 NC_015945.1 2679888 2680787 D PFAM: UbiA prenyltransferase family; InterPro IPR000537; KEGG: rbi:RB2501_12824 hypothetical protein; PFAM: UbiA prenyltransferase; SPTR: Putative uncharacterized protein; UbiA prenyltransferase 2679888..2680787 Muricauda ruestringensis DSM 13258 11055270 YP_004788885.1 CDS Murru_2425 NC_015945.1 2680791 2681960 D PFAM: 3-dehydroquinate synthase; COGs: COG0337 3-dehydroquinate synthetase; InterPro IPR002658; KEGG: rbi:RB2501_12829 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase AroB; PRIAM: 3-dehydroquinate synthase; SPTR: 3-dehydroquinate synthase; 3-dehydroquinate synthase 2680791..2681960 Muricauda ruestringensis DSM 13258 11055271 YP_004788886.1 CDS Murru_2426 NC_015945.1 2681957 2683147 D KEGG: rbi:RB2501_12834 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2681957..2683147 Muricauda ruestringensis DSM 13258 11055272 YP_004788887.1 CDS Murru_2427 NC_015945.1 2683144 2684517 D PFAM: Type I phosphodiesterase / nucleotide pyrophosphatase; COGs: COG1524 Uncharacterized protein of the AP superfamily; InterPro IPR002591; KEGG: rbi:RB2501_12839 hypothetical protein; PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; SPTR: Putative uncharacterized protein; type I phosphodiesterase/nucleotide pyrophosphatase 2683144..2684517 Muricauda ruestringensis DSM 13258 11055273 YP_004788888.1 CDS Murru_2428 NC_015945.1 2684520 2684882 D KEGG: fbc:FB2170_15208 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2684520..2684882 Muricauda ruestringensis DSM 13258 11055274 YP_004788889.1 CDS Murru_2429 NC_015945.1 2684871 2686688 R PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau; COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR003593:IPR012763:IPR003959; KEGG: fbc:FB2170_15203 DNA polymerase III subunit gamma/tau; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: DNA polymerase III subunit gamma/tau; TIGRFAM: DNA polymerase III, subunit gamma/ tau; DNA polymerase III subunits gamma and tau complement(2684871..2686688) Muricauda ruestringensis DSM 13258 11055275 YP_004788890.1 CDS Murru_2430 NC_015945.1 2687045 2687584 R PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family; COGs: COG0742 N6-adenine-specific methylase; InterPro IPR004398; KEGG: coc:Coch_1989 hypothetical protein; PFAM: RNA methyltransferase, RsmD; SPTR: Putative uncharacterized protein; TIGRFAM: RNA methyltransferase, RsmD; methyltransferase complement(2687045..2687584) Muricauda ruestringensis DSM 13258 11055277 YP_004788891.1 CDS Murru_2431 NC_015945.1 2687584 2688342 R KEGG: fbc:FB2170_15188 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2687584..2688342) Muricauda ruestringensis DSM 13258 11055278 YP_004788892.1 CDS Murru_2432 NC_015945.1 2688399 2689136 R KEGG: rbi:RB2501_12864 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2688399..2689136) Muricauda ruestringensis DSM 13258 11055279 YP_004788893.1 CDS Murru_2433 NC_015945.1 2689244 2690677 D COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; KEGG: fbc:FB2170_15178 ATP-dependent exoDNAse subunit alpha; SPTR: ATP-dependent exoDNAse (Exonuclease V), alpha subunit-helicase superfamily I member; ATP-dependent exoDNAse subunit alpha 2689244..2690677 Muricauda ruestringensis DSM 13258 11055280 YP_004788894.1 CDS Murru_2434 NC_015945.1 2690702 2691271 D KEGG: fbc:FB2170_15173 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2690702..2691271 Muricauda ruestringensis DSM 13258 11055281 YP_004788895.1 CDS Murru_2435 NC_015945.1 2691312 2692025 D PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; COGs: COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; InterPro IPR004528:IPR003329; KEGG: fbc:FB2170_15168 3-deoxy-manno-octulosonate cytidylyltransferase; PFAM: Acylneuraminate cytidylyltransferase; PRIAM: 3-deoxy-manno-octulosonate cytidylyltransferase; SPTR: 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; 3-deoxy-manno-octulosonate cytidylyltransferase 2691312..2692025 Muricauda ruestringensis DSM 13258 11055282 YP_004788896.1 CDS Murru_2436 NC_015945.1 2692016 2692720 D PFAM: haloacid dehalogenase-like hydrolase; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR005834; KEGG: fbc:FB2170_15163 hypothetical protein; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Putative uncharacterized protein; haloacid dehalogenase domain-containing protein hydrolase 2692016..2692720 Muricauda ruestringensis DSM 13258 11055283 YP_004788897.1 CDS Murru_2437 NC_015945.1 2692720 2693847 D PFAM: Iron-containing alcohol dehydrogenase; COGs: COG1454 Alcohol dehydrogenase class IV; InterPro IPR001670; KEGG: fbc:FB2170_15158 iron-containing alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, iron-type; SPTR: Iron-containing alcohol dehydrogenase; iron-containing alcohol dehydrogenase 2692720..2693847 Muricauda ruestringensis DSM 13258 11055284 YP_004788898.1 CDS Murru_2438 NC_015945.1 2693881 2694423 D PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: fbc:FB2170_15153 hypothetical protein; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Putative uncharacterized protein; phospholipid/glycerol acyltransferase 2693881..2694423 Muricauda ruestringensis DSM 13258 11055285 YP_004788899.1 CDS Murru_2439 NC_015945.1 2694443 2694586 R hypothetical protein complement(2694443..2694586) Muricauda ruestringensis DSM 13258 11055286 YP_004788900.1 CDS Murru_2440 NC_015945.1 2694906 2695910 D PFAM: Amidohydrolase; COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: rbi:RB2501_13124 hypothetical protein; PFAM: Amidohydrolase 2; SPTR: Putative uncharacterized protein; amidohydrolase 2 2694906..2695910 Muricauda ruestringensis DSM 13258 11055287 YP_004788901.1 CDS Murru_2441 NC_015945.1 2695983 2696693 R PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family; COGs: COG0217 conserved hypothetical protein; HAMAP: Protein of unknown function DUF28; InterPro IPR002876; KEGG: rbi:RB2501_12914 hypothetical protein; PFAM: Protein of unknown function DUF28; SPTR: UPF0082 protein RB2501_12914; TIGRFAM: Protein of unknown function DUF28; hypothetical protein complement(2695983..2696693) Muricauda ruestringensis DSM 13258 11055288 YP_004788902.1 CDS Murru_2442 NC_015945.1 2696765 2697046 R PFAM: Pterin 4 alpha carbinolamine dehydratase; COGs: COG2154 Pterin-4a-carbinolamine dehydratase; HAMAP: Transcriptional coactivator/pterin dehydratase; InterPro IPR001533; KEGG: cat:CA2559_11183 pterin-4A-carbinolamine dehydratase; PFAM: Transcriptional coactivator/pterin dehydratase; SPTR: Putative pterin-4-alpha-carbinolamine dehydratase; pterin-4-alpha-carbinolamine dehydratase complement(2696765..2697046) Muricauda ruestringensis DSM 13258 11055289 YP_004788903.1 CDS Murru_2443 NC_015945.1 2697095 2697913 R PFAM: RmlD substrate binding domain; COGs: COG1091 dTDP-4-dehydrorhamnose reductase; InterPro IPR001509; KEGG: fbc:FB2170_15138 NAD dependent epimerase/dehydratase family protein; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD dependent epimerase/dehydratase family protein; NAD-dependent epimerase/dehydratase complement(2697095..2697913) Muricauda ruestringensis DSM 13258 11055290 YP_004788904.1 CDS Murru_2444 NC_015945.1 2697921 2699009 R PFAM: Aminomethyltransferase folate-binding domain; Glycine cleavage T-protein C-terminal barrel domain; TIGRFAM: glycine cleavage system T protein; COGs: COG0404 Glycine cleavage system T protein (aminomethyltransferase); HAMAP: Aminomethyltransferase; InterPro IPR006223:IPR006222:IPR013977:IPR022903; KEGG: fbc:FB2170_15133 aminomethyltransferase; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel; PRIAM: Aminomethyltransferase; SPTR: Aminomethyltransferase; TIGRFAM: Glycine cleavage system T protein; aminomethyltransferase complement(2697921..2699009) Muricauda ruestringensis DSM 13258 11055291 YP_004788905.1 CDS Murru_2445 NC_015945.1 2699111 2700406 R PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; COGs: COG0498 Threonine synthase; InterPro IPR004450:IPR001926; KEGG: fbc:FB2170_15128 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Threonine synthase; SPTR: Threonine synthase; TIGRFAM: Threonine synthase; threonine synthase complement(2699111..2700406) Muricauda ruestringensis DSM 13258 11055292 YP_004788906.1 CDS Murru_2446 NC_015945.1 2700411 2701334 R PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: homoserine kinase; COGs: COG0083 Homoserine kinase; InterPro IPR000870:IPR006204:IPR013750; KEGG: fbc:FB2170_15123 homoserine kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal; SPTR: Homoserine kinase; TIGRFAM: Homoserine kinase; homoserine kinase complement(2700411..2701334) Muricauda ruestringensis DSM 13258 11055293 YP_004788907.1 CDS Murru_2447 NC_015945.1 2701338 2703782 R PFAM: Homoserine dehydrogenase; Homoserine dehydrogenase, NAD binding domain; Amino acid kinase family; ACT domain; TIGRFAM: aspartate kinase; COGs: COG0527 Aspartokinase; InterProIPR001341:IPR001048:IPR002912:IPR005106:IPR 001342; KEGG: fbc:FB2170_15118 aspartokinase/homoserine dehydrogenase; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; Aspartate/homoserine dehydrogenase, NAD-binding; PRIAM: Aspartate kinase., Homoserine dehydrogenase; SPTR: Aspartokinase/homoserine dehydrogenase; TIGRFAM: Aspartate kinase domain; aspartate kinase complement(2701338..2703782) Muricauda ruestringensis DSM 13258 11055294 YP_004788908.1 CDS Murru_2448 NC_015945.1 2704041 2705579 D PFAM: Carbohydrate kinase; YjeF-related protein N-terminus; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF N-terminal region; COGs: COG0063 sugar kinase; InterPro IPR004443:IPR000631; KEGG: fbc:FB2170_15108 putative sugar kinase; PFAM: YjeF-related protein, N-terminal; Uncharacterised protein family, carbohydrate kinase-related; SPTR: Putative sugar kinase; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; YjeF-like protein 2704041..2705579 Muricauda ruestringensis DSM 13258 11055295 YP_004788909.1 CDS Murru_2449 NC_015945.1 2705580 2705999 R KEGG: fbc:FB2170_15103 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2705580..2705999) Muricauda ruestringensis DSM 13258 11055296 YP_004788910.1 CDS Murru_2450 NC_015945.1 2706160 2708715 R PFAM: AAA domain (Cdc48 subfamily); Clp amino terminal domain; C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); UvrB/uvrC motif; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR003593:IPR004176:IPR003959:IPR001943:IPR 013093:IPR019489; KEGG: fbc:FB2170_15098 ATP-dependent Clp protease, ATP-binding subunit ClpC; PFAM: ATPase, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; UvrB/UvrC protein; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent Clp protease, ATP-binding subunit ClpC; ATPase AAA-2 domain-containing protein complement(2706160..2708715) Muricauda ruestringensis DSM 13258 11055297 YP_004788911.1 CDS Murru_2451 NC_015945.1 2708976 2711504 D PFAM: DNA gyrase C-terminal domain, beta-propeller; DNA gyrase/topoisomerase IV, subunit A; TIGRFAM: DNA gyrase, A subunit; COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR002205:IPR005743:IPR006691; KEGG: fbc:FB2170_15093 DNA gyrase subunit A; PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit A/C-terminal; SPTR: DNA gyrase A subunit; TIGRFAM: DNA gyrase, subunit A; DNA gyrase subunit A 2708976..2711504 Muricauda ruestringensis DSM 13258 11055298 YP_004788912.1 CDS Murru_2452 NC_015945.1 2711545 2712807 D PFAM: Tetratricopeptide repeat; InterPro IPR019734:IPR013105:IPR001440; KEGG: rbi:RB2501_12979 TPR repeat protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SPTR: TPR repeat protein; hypothetical protein 2711545..2712807 Muricauda ruestringensis DSM 13258 11055299 YP_004788913.1 CDS Murru_2453 NC_015945.1 2712858 2713610 R PFAM: NlpC/P60 family; COGs: COG0791 Cell wall-associated hydrolase (invasion-associated protein); InterPro IPR000064; KEGG: gfo:GFO_1506 NlpC/P60 family protein; PFAM: NLP/P60; SPTR: NlpC/P60 family protein; NLP/P60 protein complement(2712858..2713610) Muricauda ruestringensis DSM 13258 11055300 YP_004788914.1 CDS Murru_2454 NC_015945.1 2713727 2714902 R PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155:IPR020616:IPR020617; KEGG: fbc:FB2170_15078 putative acetyl-CoA acetyltransferase; PFAM: Thiolase, N-terminal; Thiolase, C-terminal; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: Probable acetyl-CoA acetyltransferase; TIGRFAM: Thiolase; acetyl-CoA acetyltransferase complement(2713727..2714902) Muricauda ruestringensis DSM 13258 11055301 YP_004788915.1 CDS Murru_2455 NC_015945.1 2715016 2717052 D PFAM: HD domain; 7TM-HD extracellular; 7TM receptor with intracellular HD hydrolase; TIGRFAM: uncharacterized domain HDIG; COGs: COG1480 membrane-associated HD superfamily hydrolase; InterPro IPR003607:IPR006675:IPR011621:IPR006674; KEGG: fbc:FB2170_15073 putative transmembrane HD family protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; Metal-dependent phosphohydrolase, 7TM intracellular domain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Putative transmembrane HD family protein; TIGRFAM: Uncharacterised protein family HDIG; 7TM receptor with intracellular metal dependent phosphohydrolase 2715016..2717052 Muricauda ruestringensis DSM 13258 11055302 YP_004788916.1 CDS Murru_2456 NC_015945.1 2717681 2718967 D PFAM: Phage integrase family; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: zpr:ZPR_1263 putative transposase; PFAM: Integrase, catalytic core, phage; SPTR: Putative transposase; integrase family protein 2717681..2718967 Muricauda ruestringensis DSM 13258 11055305 YP_004788917.1 CDS Murru_2457 NC_015945.1 2719141 2719566 D hypothetical protein 2719141..2719566 Muricauda ruestringensis DSM 13258 11055306 YP_004788918.1 CDS Murru_2458 NC_015945.1 2719759 2720067 D KEGG: gfo:GFO_1185 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein 2719759..2720067 Muricauda ruestringensis DSM 13258 11055307 YP_004788919.1 CDS Murru_2459 NC_015945.1 2720192 2724532 D PFAM: AcrB/AcrD/AcrF family; Outer membrane efflux protein; TIGRFAM: heavy metal efflux pump (cobalt-zinc-cadmium); COGs: COG3696 Putative silver efflux pump; InterPro IPR004763:IPR001036:IPR003423; KEGG: rbi:RB2501_04925 putative transport-related, membrane protein; PFAM: Acriflavin resistance protein; Outer membrane efflux protein; SPTR: Putative transport-related, membrane protein; TIGRFAM: Heavy metal efflux pump CzcA; CzcA family heavy metal efflux pump 2720192..2724532 Muricauda ruestringensis DSM 13258 11055308 YP_004788920.1 CDS Murru_2460 NC_015945.1 2724537 2725736 D TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: rbi:RB2501_04920 cation efflux system protein; SPTR: Cation efflux system protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 2724537..2725736 Muricauda ruestringensis DSM 13258 11055309 YP_004788921.1 CDS Murru_2461 NC_015945.1 2725752 2726168 D PFAM: Ferric uptake regulator family; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; KEGG: rbi:RB2501_04910 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2725752..2726168 Muricauda ruestringensis DSM 13258 11055310 YP_004788922.1 CDS Murru_2462 NC_015945.1 2726180 2728177 D PFAM: E1-E2 ATPase; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; COGs: COG2217 Cation transport ATPase; InterProIPR006404:IPR006416:IPR001757:IPR008250:IPR 005834; KEGG: rbi:RB2501_04905 cation-transporting ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; PRIAM: Zinc-exporting ATPase; SPTR: Cation-transporting ATPase, P-type, putative zinc-transporting ATPase; TIGRFAM: ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating; ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; cadmium-translocating P-type ATPase 2726180..2728177 Muricauda ruestringensis DSM 13258 11055311 YP_004788923.1 CDS Murru_2463 NC_015945.1 2728338 2728667 R PFAM: Uncharacterised BCR, YnfA/UPF0060 family; COGs: COG1742 conserved hypothetical protein; HAMAP: Uncharacterised protein family UPF0060; InterPro IPR003844; KEGG: mtt:Ftrac_0626 hypothetical protein; PFAM: Uncharacterised protein family UPF0060; SPTR: Putative uncharacterized protein; membrane protein ynfA complement(2728338..2728667) Muricauda ruestringensis DSM 13258 11055312 YP_004788924.1 CDS Murru_2464 NC_015945.1 2728667 2729116 R KEGG: hbo:Hbor_39730 Zn-dependent oxidoreductase, NADPH:quinone reductase; SPTR: Putative uncharacterized protein; hypothetical protein complement(2728667..2729116) Muricauda ruestringensis DSM 13258 11055313 YP_004788925.1 CDS Murru_2465 NC_015945.1 2729206 2729397 D hypothetical protein 2729206..2729397 Muricauda ruestringensis DSM 13258 11055314 YP_004788926.1 CDS Murru_2466 NC_015945.1 2729394 2729603 R KEGG: mtt:Ftrac_2119 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein complement(2729394..2729603) Muricauda ruestringensis DSM 13258 11055315 YP_004788927.1 CDS Murru_2467 NC_015945.1 2729603 2730205 R PFAM: Heavy-metal-associated domain; MerT mercuric transport protein; TIGRFAM: copper ion binding protein; COGs: COG2608 Copper chaperone; InterPro IPR003457:IPR006121; KEGG: gfo:GFO_1324 heavy metal transport/detoxification domain-containing protein; PFAM: Heavy metal transport/detoxification protein; Mercuric transport protein MerT; SPTR: Membrane protein containing heavy metal transport/detoxification domain; heavy metal transport/detoxification protein complement(2729603..2730205) Muricauda ruestringensis DSM 13258 11055316 YP_004788928.1 CDS Murru_2468 NC_015945.1 2730207 2730578 R PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: gfo:GFO_1325 transcription regulator ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: ArsR family transcriptional regulator protein; regulatory protein ArsR complement(2730207..2730578) Muricauda ruestringensis DSM 13258 11055317 YP_004788929.1 CDS Murru_2469 NC_015945.1 2731080 2731916 D PFAM: Domain of unknown function (DUF932); KEGG: zpr:ZPR_4283 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2731080..2731916 Muricauda ruestringensis DSM 13258 11055318 YP_004788930.1 CDS Murru_2470 NC_015945.1 2732573 2732914 D PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR011344:IPR000424; KEGG: zpr:ZPR_4270 single-strand binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; single-strand binding protein 2732573..2732914 Muricauda ruestringensis DSM 13258 11055319 YP_004788931.1 CDS Murru_2471 NC_015945.1 2732991 2733440 D PFAM: Protein of unknown function (DUF2466); COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: zpr:ZPR_4133 putative DNA repair protein; PFAM: Uncharacterised protein family UPF0758; SPTR: Putative DNA repair protein; DNA repair protein RadC 2732991..2733440 Muricauda ruestringensis DSM 13258 11055320 YP_004788932.1 CDS Murru_2472 NC_015945.1 2733451 2733558 D hypothetical protein 2733451..2733558 Muricauda ruestringensis DSM 13258 11055321 YP_004788933.1 CDS Murru_2473 NC_015945.1 2733580 2733783 D KEGG: zpr:ZPR_4132 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2733580..2733783 Muricauda ruestringensis DSM 13258 11055322 YP_004788934.1 CDS Murru_2474 NC_015945.1 2734084 2734245 D hypothetical protein 2734084..2734245 Muricauda ruestringensis DSM 13258 11055323 YP_004788935.1 CDS Murru_2475 NC_015945.1 2734705 2735289 D KEGG: gfo:GFO_1354 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2734705..2735289 Muricauda ruestringensis DSM 13258 11055324 YP_004788936.1 CDS Murru_2476 NC_015945.1 2735292 2736311 D KEGG: zpr:ZPR_4265 mobilization protein B; SPTR: Mobilization protein B; mobilization protein B 2735292..2736311 Muricauda ruestringensis DSM 13258 11055325 YP_004788937.1 CDS Murru_2477 NC_015945.1 2736322 2737929 D PFAM: Type IV secretion-system coupling protein DNA-binding domain; COGs: COG3505 Type IV secretory pathway VirD4 protein; KEGG: zpr:ZPR_4129 mobilisation protein C; SPTR: Mobilisation protein C; mobilization protein C 2736322..2737929 Muricauda ruestringensis DSM 13258 11055326 YP_004788938.1 CDS Murru_2478 NC_015945.1 2737981 2739726 R PFAM: Domain of unknown function DUF87; Bacterial protein of unknown function (DUF853); COGs: COG0433 ATPase; InterPro IPR002789; KEGG: tmz:Tmz1t_0482 protein of unknown function DUF87; PFAM: Domain of unknown function DUF87; SPTR: Predicted ATPase; hypothetical protein complement(2737981..2739726) Muricauda ruestringensis DSM 13258 11055327 YP_004788939.1 CDS Murru_2479 NC_015945.1 2739733 2740752 R KEGG: tdn:Suden_0238 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2739733..2740752) Muricauda ruestringensis DSM 13258 11055328 YP_004788940.1 CDS Murru_2480 NC_015945.1 2740754 2742361 R PFAM: N-6 DNA Methylase; InterPro IPR011639; KEGG: fps:FP1566 modification methyltransferase; SPTR: Putative uncharacterized protein; modification methyltransferase complement(2740754..2742361) Muricauda ruestringensis DSM 13258 11055329 YP_004788941.1 CDS Murru_2481 NC_015945.1 2742348 2745326 R PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Eco57I restriction endonuclease; InterPro IPR007409:IPR011639; KEGG: fps:FP1567 endonuclease-methyltransferase fusion protein; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction modification methylase Eco57I; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Type IIS restriction enzyme Eco57I; type II site-specific deoxyribonuclease complement(2742348..2745326) Muricauda ruestringensis DSM 13258 11055330 YP_004788942.1 CDS Murru_2482 NC_015945.1 2745329 2745661 R PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: fps:FP0857 putative DNA binding protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative DNA binding protein; helix-turn-helix domain-containing protein complement(2745329..2745661) Muricauda ruestringensis DSM 13258 11055331 YP_004788943.1 CDS Murru_2483 NC_015945.1 2745942 2746316 R PFAM: Helix-turn-helix; InterPro IPR001387; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; helix-turn-helix domain-containing protein complement(2745942..2746316) Muricauda ruestringensis DSM 13258 11055332 YP_004788944.1 CDS Murru_2484 NC_015945.1 2747035 2750064 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: fjo:Fjoh_3556 TonB-dependent receptor, plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein, probably involved in nutrient binding; TonB-dependent receptor plug 2747035..2750064 Muricauda ruestringensis DSM 13258 11055333 YP_004788945.1 CDS Murru_2485 NC_015945.1 2750075 2751484 D PFAM: SusD family; InterPro IPR012944; KEGG: fjo:Fjoh_3036 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 2750075..2751484 Muricauda ruestringensis DSM 13258 11055334 YP_004788946.1 CDS Murru_2486 NC_015945.1 2751471 2753780 D KEGG: sus:Acid_7167 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2751471..2753780 Muricauda ruestringensis DSM 13258 11055335 YP_004788947.1 CDS Murru_2487 NC_015945.1 2753831 2754085 R hypothetical protein complement(2753831..2754085) Muricauda ruestringensis DSM 13258 11055336 YP_004788948.1 CDS Murru_2488 NC_015945.1 2754202 2755230 R KEGG: fjo:Fjoh_3038 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2754202..2755230) Muricauda ruestringensis DSM 13258 11055337 YP_004788949.1 CDS Murru_2489 NC_015945.1 2755248 2755709 R KEGG: fjo:Fjoh_3560 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2755248..2755709) Muricauda ruestringensis DSM 13258 11055338 YP_004788950.1 CDS Murru_2490 NC_015945.1 2755777 2756739 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain; InterPro IPR018060:IPR000005; KEGG: zpr:ZPR_0531 AraC family transcription regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: AraC family transcription regulator; AraC family transcriptional regulator complement(2755777..2756739) Muricauda ruestringensis DSM 13258 11055339 YP_004788951.1 CDS Murru_2491 NC_015945.1 2756793 2757164 R KEGG: gfo:GFO_1377 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2756793..2757164) Muricauda ruestringensis DSM 13258 11055340 YP_004788952.1 CDS Murru_2492 NC_015945.1 2757540 2758379 D PFAM: RteC protein; InterPro IPR018534; KEGG: fps:FP1540 hypothetical protein; PFAM: Tetracycline regulation of excision, RteC; SPTR: Putative uncharacterized protein; Tetracycline regulation of excision, RteC 2757540..2758379 Muricauda ruestringensis DSM 13258 11055341 YP_004788953.1 CDS Murru_2493 NC_015945.1 2758666 2758944 D KEGG: zpr:ZPR_2233 putative DNA-binding protein; SPTR: Putative DNA-binding protein; putative DNA-binding protein 2758666..2758944 Muricauda ruestringensis DSM 13258 11055342 YP_004788954.1 CDS Murru_2494 NC_015945.1 2758947 2759486 D KEGG: zpr:ZPR_1275 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2758947..2759486 Muricauda ruestringensis DSM 13258 11055343 YP_004788955.1 CDS Murru_2495 NC_015945.1 2759483 2760145 D KEGG: zpr:ZPR_1274 ATPase; SPTR: ATPase; ATPase 2759483..2760145 Muricauda ruestringensis DSM 13258 11055344 YP_004788956.1 CDS Murru_2496 NC_015945.1 2760393 2761124 D PFAM: CAAX amino terminal protease family; InterPro IPR003675; KEGG: mtt:Ftrac_3434 abortive infection protein; PFAM: Abortive infection protein; SPTR: CAAX amino terminal protease family protein; abortive infection protein 2760393..2761124 Muricauda ruestringensis DSM 13258 11055345 YP_004788957.1 CDS Murru_2497 NC_015945.1 2761412 2763115 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: gau:GAU_3453 beta-lactamase family protein; PFAM: Beta-lactamase-related; SPTR: Putative 6-aminohexanoate-dimer hydrolase; beta-lactamase 2761412..2763115 Muricauda ruestringensis DSM 13258 11055346 YP_004788958.1 CDS Murru_2498 NC_015945.1 2763150 2764262 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: kko:Kkor_0097 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase 2763150..2764262 Muricauda ruestringensis DSM 13258 11055347 YP_004788959.1 CDS Murru_2499 NC_015945.1 2764259 2764963 D KEGG: gfo:GFO_3458 secreted protein; SPTR: Putative uncharacterized protein; hypothetical protein 2764259..2764963 Muricauda ruestringensis DSM 13258 11055348 YP_004788960.1 CDS Murru_2500 NC_015945.1 2764970 2766433 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: rbi:RB2501_10982 penicillin-binding protein; PFAM: Beta-lactamase-related; SPTR: Penicillin-binding protein, putative; beta-lactamase 2764970..2766433 Muricauda ruestringensis DSM 13258 11055349 YP_004788961.1 CDS Murru_2501 NC_015945.1 2766430 2767530 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: kko:Kkor_0099 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase 2766430..2767530 Muricauda ruestringensis DSM 13258 11055350 YP_004788962.1 CDS Murru_2502 NC_015945.1 2767813 2768931 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: zpr:ZPR_3293 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase 2767813..2768931 Muricauda ruestringensis DSM 13258 11055351 YP_004788963.1 CDS Murru_2503 NC_015945.1 2769002 2769337 D KEGG: zpr:ZPR_3294 membrane protein; SPTR: Membrane protein; membrane protein 2769002..2769337 Muricauda ruestringensis DSM 13258 11055352 YP_004788964.1 CDS Murru_2504 NC_015945.1 2769321 2769899 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: zpr:ZPR_3295 RNA polymerase sigma-70 factor, ECF subfamily protein; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma-70 factor, ECF subfamily protein; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 2769321..2769899 Muricauda ruestringensis DSM 13258 11055353 YP_004788965.1 CDS Murru_2505 NC_015945.1 2769921 2770265 D hypothetical protein 2769921..2770265 Muricauda ruestringensis DSM 13258 11055354 YP_004788966.1 CDS Murru_2506 NC_015945.1 2770269 2771030 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: dfe:Dfer_4652 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family; AraC family transcriptional regulator 2770269..2771030 Muricauda ruestringensis DSM 13258 11055355 YP_004788967.1 CDS Murru_2508 NC_015945.1 2771551 2773008 D PFAM: Amidohydrolase family; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: gau:GAU_1079 hypothetical protein; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase family protein; amidohydrolase 2771551..2773008 Muricauda ruestringensis DSM 13258 11055357 YP_004788968.1 CDS Murru_2509 NC_015945.1 2773005 2773961 D PFAM: WD40-like Beta Propeller Repeat; InterPro IPR011659; KEGG: cpi:Cpin_4395 hypothetical protein; PFAM: WD40-like Beta Propeller; SPTR: Putative uncharacterized protein; WD40-like beta Propeller containing protein 2773005..2773961 Muricauda ruestringensis DSM 13258 11055358 YP_004788969.1 CDS Murru_2510 NC_015945.1 2773961 2774968 D PFAM: Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; COGs: COG4927 choloylglycine hydrolase; InterPro IPR005079; KEGG: bcz:pE33L466_0332 choloylglycine hydrolase; PFAM: Peptidase C45, acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; SPTR: Choloylglycine hydrolase; peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 2773961..2774968 Muricauda ruestringensis DSM 13258 11055359 YP_004788970.1 CDS Murru_2511 NC_015945.1 2775020 2776039 D PFAM: Polysaccharide deacetylase; COGs: COG0726 xylanase/chitin deacetylase; InterPro IPR002509; KEGG: mtt:Ftrac_3433 polysaccharide deacetylase; PFAM: Polysaccharide deacetylase; SPTR: Polysaccharide deacetylase domain protein; polysaccharide deacetylase 2775020..2776039 Muricauda ruestringensis DSM 13258 11055360 YP_004788971.1 CDS Murru_2512 NC_015945.1 2776071 2777942 D PFAM: IPT/TIG domain; Regulator of chromosome condensation (RCC1) repeat; COGs: COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing protein; InterPro IPR002909; KEGG: cki:Calkr_0021 regulator of chromosome condensation RCC1; PFAM: Cell surface receptor IPT/TIG; SMART: Cell surface receptor IPT/TIG; SPTR: Alpha-tubulin suppressor and related RCC1 domain-containing protein-like protein; cell surface receptor IPT/TIG domain-containing protein 2776071..2777942 Muricauda ruestringensis DSM 13258 11055361 YP_004788972.1 CDS Murru_2513 NC_015945.1 2778010 2779143 D PFAM: Amidohydrolase family; InterPro IPR006680; KEGG: ttu:TERTU_1298 amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase; amidohydrolase 2778010..2779143 Muricauda ruestringensis DSM 13258 11055362 YP_004788973.1 CDS Murru_2514 NC_015945.1 2779214 2779768 D KEGG: kko:Kkor_1036 hypothetical protein; SPTR: Hydrolase, NUDIX family; hypothetical protein 2779214..2779768 Muricauda ruestringensis DSM 13258 11055363 YP_004788974.1 CDS Murru_2515 NC_015945.1 2779834 2781201 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: phe:Phep_2415 beta-lactamase; PFAM: Beta-lactamase-related; PRIAM: Serine-type D-Ala-D-Ala carboxypeptidase; SPTR: Beta-lactamase; serine-type D-Ala-D-Ala carboxypeptidase 2779834..2781201 Muricauda ruestringensis DSM 13258 11055364 YP_004788975.1 CDS Murru_2516 NC_015945.1 2781227 2781919 D KEGG: bbe:BBR47_31590 hypothetical protein; SPTR: Hypothetical membrane protein; hypothetical protein 2781227..2781919 Muricauda ruestringensis DSM 13258 11055365 YP_004788976.1 CDS Murru_2517 NC_015945.1 2782468 2782986 D hypothetical protein 2782468..2782986 Muricauda ruestringensis DSM 13258 11055366 YP_004788977.1 CDS Murru_2518 NC_015945.1 2783223 2784221 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR020843:IPR013154:IPR013149; KEGG: pjd:Pjdr2_0556 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like; PRIAM: NADPH:quinone reductase; SMART: Polyketide synthase, enoylreductase; SPTR: Alcohol dehydrogenase, zinc containing; NADPH:quinone reductase 2783223..2784221 Muricauda ruestringensis DSM 13258 11055367 YP_004788978.1 CDS Murru_2519 NC_015945.1 2784295 2785209 R PFAM: Bacterial regulatory proteins, luxR family; PAS fold; TIGRFAM: PAS domain S-box; InterPro IPR000014:IPR013655; KEGG: cpi:Cpin_1033 TPR repeat-containing protein; PFAM: PAS fold-3; SMART: PAS; SPTR: Tetratricopeptide repeat domain protein; TIGRFAM: PAS; PAS sensor protein complement(2784295..2785209) Muricauda ruestringensis DSM 13258 11055368 YP_004788979.1 CDS Murru_2520 NC_015945.1 2785426 2785614 D hypothetical protein 2785426..2785614 Muricauda ruestringensis DSM 13258 11055369 YP_004788980.1 CDS Murru_2521 NC_015945.1 2785559 2787178 D InterPro IPR001611; KEGG: lmo:lmo0331 hypothetical protein; PFAM: Leucine-rich repeat; SPTR: Internalin-related protein; hypothetical protein 2785559..2787178 Muricauda ruestringensis DSM 13258 11055370 YP_004788981.1 CDS Murru_2522 NC_015945.1 2787293 2788579 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: rbi:RB2501_14374 putative beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Putative beta-lactamase; beta-lactamase 2787293..2788579 Muricauda ruestringensis DSM 13258 11055371 YP_004788982.1 CDS Murru_2523 NC_015945.1 2788782 2790350 D KEGG: fjo:Fjoh_1188 hypothetical protein; SPTR: Internalin-related protein; hypothetical protein 2788782..2790350 Muricauda ruestringensis DSM 13258 11055372 YP_004788983.1 CDS Murru_2524 NC_015945.1 2790595 2791866 R KEGG: dfe:Dfer_2270 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2790595..2791866) Muricauda ruestringensis DSM 13258 11055373 YP_004788984.1 CDS Murru_2525 NC_015945.1 2791996 2793363 D KEGG: sus:Acid_5342 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2791996..2793363 Muricauda ruestringensis DSM 13258 11055374 YP_004788985.1 CDS Murru_2526 NC_015945.1 2793569 2794108 D PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: lby:Lbys_2111 helix-TurN-helix domain protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; helix-turn-helix domain-containing protein 2793569..2794108 Muricauda ruestringensis DSM 13258 11055375 YP_004788986.1 CDS Murru_2527 NC_015945.1 2794213 2795682 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: kko:Kkor_1240 beta-lactamase; PFAM: Beta-lactamase-related; SPTR: Beta-lactamase; beta-lactamase 2794213..2795682 Muricauda ruestringensis DSM 13258 11055376 YP_004788987.1 CDS Murru_2528 NC_015945.1 2796311 2798047 D PFAM: Predicted permease; InterPro IPR003838; KEGG: cpi:Cpin_3610 protein of unknown function DUF214; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: Putative uncharacterized protein; hypothetical protein 2796311..2798047 Muricauda ruestringensis DSM 13258 11055377 YP_004788988.1 CDS Murru_2529 NC_015945.1 2798151 2799833 D PFAM: Beta-lactamase; Fibrobacter succinogenes major domain (Fib_succ_major); TIGRFAM: Fibrobacter succinogenes major paralogous domain; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR011871:IPR001466; KEGG: mtt:Ftrac_1319 beta-lactamase; SPTR: Putative uncharacterized protein; hypothetical protein 2798151..2799833 Muricauda ruestringensis DSM 13258 11055378 YP_004788989.1 CDS Murru_2530 NC_015945.1 2799965 2801662 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: ava:Ava_1520 beta-lactamase; PFAM: Beta-lactamase-related; PRIAM: D-stereospecific aminopeptidase; SPTR: Beta-lactamase; D-stereospecific aminopeptidase 2799965..2801662 Muricauda ruestringensis DSM 13258 11055379 YP_004788990.1 CDS Murru_2532 NC_015945.1 2802423 2803115 R PFAM: N-acetylmuramoyl-L-alanine amidase; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: gfo:GFO_1368 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: N-acetylmuramoyl-L-alanine amidase; cell wall hydrolase/autolysin complement(2802423..2803115) Muricauda ruestringensis DSM 13258 11055381 YP_004788991.1 CDS Murru_2533 NC_015945.1 2803282 2803569 D KEGG: gfo:GFO_1367 membrane protein; SPTR: Putative uncharacterized protein; membrane protein 2803282..2803569 Muricauda ruestringensis DSM 13258 11055382 YP_004788992.1 CDS Murru_2534 NC_015945.1 2803571 2803849 D KEGG: gfo:GFO_1366 membrane protein; SPTR: Membrane protein; membrane protein 2803571..2803849 Muricauda ruestringensis DSM 13258 11055383 YP_004788993.1 CDS Murru_2535 NC_015945.1 2803842 2806256 D PFAM: Domain of unknown function DUF87; TIGRFAM: Bacteroides conjugation system ATPase, TraG family; COGs: COG3451 Type IV secretory pathway VirB4 protein; InterPro IPR022509; KEGG: zpr:ZPR_1269 type IV secretory pathway, VirB4 component; SPTR: Type IV secretory pathway, VirB4 component; TIGRFAM: Conjugation system ATPase, TraG; conjugation system ATPase, TraG family 2803842..2806256 Muricauda ruestringensis DSM 13258 11055384 YP_004788994.1 CDS Murru_2536 NC_015945.1 2806253 2806858 D PFAM: Type IV secretion system proteins; KEGG: zpr:ZPR_1268 conserved protein found in conjugate transposon; SPTR: Conserved protein found in conjugate transposon; conjugate transposon protein 2806253..2806858 Muricauda ruestringensis DSM 13258 11055385 YP_004788995.1 CDS Murru_2537 NC_015945.1 2806865 2807695 D KEGG: zpr:ZPR_1267 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2806865..2807695 Muricauda ruestringensis DSM 13258 11055386 YP_004788996.1 CDS Murru_2538 NC_015945.1 2807753 2808379 D KEGG: zpr:ZPR_1266 conserved protein found in conjugate transposon; SPTR: Conserved protein found in conjugate transposon; conjugate transposon protein 2807753..2808379 Muricauda ruestringensis DSM 13258 11055387 YP_004788997.1 CDS Murru_2539 NC_015945.1 2808360 2809307 D PFAM: Protein of unknown function (DUF3714); KEGG: zpr:ZPR_1265 conjugative transposon protein TraM; SPTR: Conjugative transposon protein TraM; conjugative transposon protein TraM 2808360..2809307 Muricauda ruestringensis DSM 13258 11055388 YP_004788998.1 CDS Murru_2540 NC_015945.1 2809318 2810115 D KEGG: zpr:ZPR_1264 conserved protein found in conjugate transposon; SPTR: Conserved protein found in conjugate transposon; conjugate transposon protein 2809318..2810115 Muricauda ruestringensis DSM 13258 11055389 YP_004788999.1 CDS Murru_2541 NC_015945.1 2810236 2810892 D PFAM: Response regulator receiver domain; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789; KEGG: cat:CA2559_08901 putative nitrate/nitrite DNA-binding response regulator; PFAM: Signal transduction response regulator, receiver domain; SPTR: Putative nitrate/nitrite DNA-binding response regulator; response regulator receiver protein 2810236..2810892 Muricauda ruestringensis DSM 13258 11055390 YP_004789000.1 CDS Murru_2542 NC_015945.1 2811164 2812510 D PFAM: Sel1 repeat; COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterPro IPR006597; KEGG: lsp:Bsph_0642 suppressor of lin-12-like protein (Sel-1L); PFAM: Sel1-like; SMART: Sel1-like; SPTR: Putative uncharacterized protein; Sel1 domain-containing protein repeat-containing protein 2811164..2812510 Muricauda ruestringensis DSM 13258 11055391 YP_004789001.1 CDS Murru_2543 NC_015945.1 2812521 2814599 D SPTR: Putative uncharacterized protein; hypothetical protein 2812521..2814599 Muricauda ruestringensis DSM 13258 11055392 YP_004789002.1 CDS Murru_2544 NC_015945.1 2814577 2815290 D KEGG: fba:FIC_00903 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2814577..2815290 Muricauda ruestringensis DSM 13258 11055393 YP_004789003.1 CDS Murru_2545 NC_015945.1 2815868 2817118 D PFAM: Phage integrase family; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: cat:CA2559_11843 putative transposase; PFAM: Integrase, catalytic core, phage; SPTR: Putative transposase; integrase family protein 2815868..2817118 Muricauda ruestringensis DSM 13258 11055394 YP_004789004.1 CDS Murru_2546 NC_015945.1 2817183 2817398 R hypothetical protein complement(2817183..2817398) Muricauda ruestringensis DSM 13258 11055395 YP_004789005.1 CDS Murru_2547 NC_015945.1 2817475 2818023 D KEGG: phe:Phep_2691 RNA polymerase sigma factor, sigma-70 family; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; sigma-70 family RNA polymerase sigma factor 2817475..2818023 Muricauda ruestringensis DSM 13258 11055396 YP_004789006.1 CDS Murru_2548 NC_015945.1 2818004 2818273 D SPTR: Putative uncharacterized protein; hypothetical protein 2818004..2818273 Muricauda ruestringensis DSM 13258 11055397 YP_004789007.1 CDS Murru_2549 NC_015945.1 2818270 2818923 D PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; COGs: COG0740 Protease subunit of ATP-dependent Clp protease; HAMAP: Peptidase S14, ClpP; InterPro IPR001907; KEGG: chl:Chy400_1660 endopeptidase Clp; PFAM: Peptidase S14, ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit 1; ATP-dependent Clp protease proteolytic subunit 2818270..2818923 Muricauda ruestringensis DSM 13258 11055398 YP_004789008.1 CDS Murru_2550 NC_015945.1 2819331 2821127 D PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115:IPR004437; KEGG: zpr:ZPR_1757 putative partitioning protein; PFAM: ParB-like nuclease; SMART: ParB-like nuclease; SPTR: Putative partitioning protein; TIGRFAM: ParB-like partition protein; parB-like partition protein 2819331..2821127 Muricauda ruestringensis DSM 13258 11055399 YP_004789009.1 CDS Murru_2551 NC_015945.1 2821175 2821933 R PFAM: Uncharacterised ACR, COG2135; COGs: COG2135 conserved hypothetical protein; InterPro IPR003738; KEGG: fbc:FB2170_11741 hypothetical protein; PFAM: Protein of unknown function DUF159; SPTR: Putative uncharacterized protein; hypothetical protein complement(2821175..2821933) Muricauda ruestringensis DSM 13258 11055400 YP_004789010.1 CDS Murru_2552 NC_015945.1 2822052 2823266 D PFAM: impB/mucB/samB family C-terminal; impB/mucB/samB family; COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; HAMAP: DNA polymerase IV; InterPro IPR001126:IPR022880; KEGG: fbc:FB2170_04080 DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like; PRIAM: DNA-directed DNA polymerase; SPTR: DNA polymerase IV 2; DNA polymerase IV 2822052..2823266 Muricauda ruestringensis DSM 13258 11055401 YP_004789011.1 CDS Murru_2553 NC_015945.1 2823266 2826244 D PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; TIGRFAM: DNA-directed DNA polymerase III (polc); COGs: COG0587 DNA polymerase III alpha subunit; InterPro IPR003141:IPR004805:IPR004013:IPR011708; KEGG: rbi:RB2501_04555 DNA polymerase III subunit alpha; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; PRIAM: DNA-directed DNA polymerase; SMART: Polymerase/histidinol phosphatase, N-terminal; SPTR: DNA polymerase III alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; DNA polymerase III subunit alpha 2823266..2826244 Muricauda ruestringensis DSM 13258 11055402 YP_004789012.1 CDS Murru_2554 NC_015945.1 2826505 2827179 D hypothetical protein 2826505..2827179 Muricauda ruestringensis DSM 13258 11055403 YP_004789013.1 CDS Murru_2555 NC_015945.1 2827730 2828164 D PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR011344:IPR000424; KEGG: fps:FP0083 hypothetical protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; single-strand binding protein 2827730..2828164 Muricauda ruestringensis DSM 13258 11055404 YP_004789014.1 CDS Murru_2556 NC_015945.1 2828232 2828681 D PFAM: Protein of unknown function (DUF2466); COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: zpr:ZPR_4133 putative DNA repair protein; PFAM: Uncharacterised protein family UPF0758; SPTR: Putative DNA repair protein; DNA repair protein RadC 2828232..2828681 Muricauda ruestringensis DSM 13258 11055405 YP_004789015.1 CDS Murru_2557 NC_015945.1 2829103 2829690 D KEGG: gfo:GFO_1354 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2829103..2829690 Muricauda ruestringensis DSM 13258 11055406 YP_004789016.1 CDS Murru_2558 NC_015945.1 2829693 2830712 D KEGG: gfo:GFO_1355 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2829693..2830712 Muricauda ruestringensis DSM 13258 11055407 YP_004789017.1 CDS Murru_2559 NC_015945.1 2830724 2832319 D PFAM: Type IV secretion-system coupling protein DNA-binding domain; COGs: COG3505 Type IV secretory pathway VirD4 protein; KEGG: zpr:ZPR_4129 mobilisation protein C; SPTR: Mobilisation protein C; mobilization protein C 2830724..2832319 Muricauda ruestringensis DSM 13258 11055408 YP_004789018.1 CDS Murru_2560 NC_015945.1 2832334 2833104 R KEGG: zpr:ZPR_1613 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2832334..2833104) Muricauda ruestringensis DSM 13258 11055409 YP_004789019.1 CDS Murru_2561 NC_015945.1 2833488 2833664 D hypothetical protein 2833488..2833664 Muricauda ruestringensis DSM 13258 11055410 YP_004789020.1 CDS Murru_2562 NC_015945.1 2833739 2835682 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: gfo:GFO_2620 two-component system sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; SPTR: Putative transmembrane protein; putative signal transduction histidine kinase 2833739..2835682 Muricauda ruestringensis DSM 13258 11055411 YP_004789021.1 CDS Murru_2563 NC_015945.1 2835697 2836362 D COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; KEGG: gfo:GFO_2621 response regulator receiver domain-containing protein; SPTR: Putative uncharacterized protein; response regulator receiver protein 2835697..2836362 Muricauda ruestringensis DSM 13258 11055412 YP_004789022.1 CDS Murru_2564 NC_015945.1 2836466 2836849 D PFAM: PEGA domain; InterPro IPR013229; KEGG: pgn:PGN_0758 hypothetical protein; PFAM: PEGA; SPTR: Lipoprotein, putative; PEGA domain-containing protein 2836466..2836849 Muricauda ruestringensis DSM 13258 11055413 YP_004789023.1 CDS Murru_2565 NC_015945.1 2837005 2837163 D KEGG: vfi:VF_2604 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2837005..2837163 Muricauda ruestringensis DSM 13258 11055414 YP_004789024.1 CDS Murru_2566 NC_015945.1 2837175 2837444 D KEGG: nca:Noca_4656 hypothetical protein; SPTR: Putative uncharacterized protein gp05; hypothetical protein 2837175..2837444 Muricauda ruestringensis DSM 13258 11055415 YP_004789025.1 CDS Murru_2567 NC_015945.1 2837449 2838498 D PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); COGs: COG4748 conserved hypothetical protein; InterPro IPR007409; KEGG: zpr:ZPR_1621 restriction endonuclease; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; SPTR: Restriction endonuclease; Restriction endonuclease, type I, EcoRI, R subunit/Type III 2837449..2838498 Muricauda ruestringensis DSM 13258 11055416 YP_004789026.1 CDS Murru_2568 NC_015945.1 2838488 2838715 D KEGG: fba:FIC_01679 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2838488..2838715 Muricauda ruestringensis DSM 13258 11055417 YP_004789027.1 CDS Murru_2569 NC_015945.1 2838724 2839536 R PFAM: Endonuclease/Exonuclease/phosphatase family; InterPro IPR008185:IPR005135; KEGG: fjo:Fjoh_0034 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SMART: Deoxyribonuclease I, eukaryotic; SPTR: Endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase complement(2838724..2839536) Muricauda ruestringensis DSM 13258 11055418 YP_004789028.1 CDS Murru_2570 NC_015945.1 2839673 2840437 D KEGG: zpr:ZPR_3306 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2839673..2840437 Muricauda ruestringensis DSM 13258 11055419 YP_004789029.1 CDS Murru_2571 NC_015945.1 2840510 2840872 D KEGG: rbi:RB2501_06215 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2840510..2840872 Muricauda ruestringensis DSM 13258 11055420 YP_004789030.1 CDS Murru_2572 NC_015945.1 2841490 2843703 D PFAM: C-5 cytosine-specific DNA methylase; TIGRFAM: DNA-methyltransferase (dcm); COGs: COG0270 Site-specific DNA methylase; InterPro IPR001525; KEGG: cat:CA2559_00245 site-specific DNA-methyltransferase; PFAM: C-5 cytosine methyltransferase; SPTR: Cytosine-specific methyltransferase; TIGRFAM: C-5 cytosine methyltransferase; DNA-cytosine methyltransferase 2841490..2843703 Muricauda ruestringensis DSM 13258 11055421 YP_004789031.1 CDS Murru_2573 NC_015945.1 2843700 2844878 D KEGG: cat:CA2559_00250 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2843700..2844878 Muricauda ruestringensis DSM 13258 11055422 YP_004789032.1 CDS Murru_2574 NC_015945.1 2845110 2846891 R PFAM: Uncharacterized conserved protein (DUF2081); Protein of unknown function DUF262; COGs: COG3472 conserved hypothetical protein; InterPro IPR004919:IPR018651; KEGG: has:Halsa_1042 protein of unknown function DUF2081; PFAM: Domain of unknown function DUF262; Protein of unknown function DUF2081; SPTR: Putative uncharacterized protein; hypothetical protein complement(2845110..2846891) Muricauda ruestringensis DSM 13258 11055423 YP_004789033.1 CDS Murru_2575 NC_015945.1 2846979 2848514 R PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG3666 Transposase and inactivated derivatives; InterPro IPR002559; KEGG: zpr:ZPR_3275 ISCps6, transposase; PFAM: Transposase, IS4-like; SPTR: ISCps6, transposase; transposase IS4 family protein complement(2846979..2848514) Muricauda ruestringensis DSM 13258 11055424 YP_004789034.1 CDS Murru_2576 NC_015945.1 2848778 2849737 R KEGG: fjo:Fjoh_3594 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2848778..2849737) Muricauda ruestringensis DSM 13258 11055425 YP_004789035.1 CDS Murru_2577 NC_015945.1 2850205 2850459 R KEGG: zpr:ZPR_2241 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2850205..2850459) Muricauda ruestringensis DSM 13258 11055426 YP_004789036.1 CDS Murru_2578 NC_015945.1 2851202 2854231 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: fjo:Fjoh_4373 TonB-dependent receptor, plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein, probably involved in nutrient binding; TonB-dependent receptor plug 2851202..2854231 Muricauda ruestringensis DSM 13258 11055427 YP_004789037.1 CDS Murru_2579 NC_015945.1 2854247 2855683 D PFAM: SusD family; InterPro IPR012944; KEGG: fjo:Fjoh_3036 RagB/SusD domain-containing protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 2854247..2855683 Muricauda ruestringensis DSM 13258 11055428 YP_004789038.1 CDS Murru_2580 NC_015945.1 2855764 2858073 D KEGG: sus:Acid_7167 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2855764..2858073 Muricauda ruestringensis DSM 13258 11055429 YP_004789039.1 CDS Murru_2581 NC_015945.1 2858196 2858444 R hypothetical protein complement(2858196..2858444) Muricauda ruestringensis DSM 13258 11055430 YP_004789040.1 CDS Murru_2582 NC_015945.1 2858515 2858952 R PFAM: Methylamine utilisation protein MauE; KEGG: cpi:Cpin_5558 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2858515..2858952) Muricauda ruestringensis DSM 13258 11055431 YP_004789041.1 CDS Murru_2583 NC_015945.1 2859049 2859975 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: gfo:GFO_1378 AraC family transcription regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: AraC family transcriptional regulator protein; AraC family transcriptional regulator complement(2859049..2859975) Muricauda ruestringensis DSM 13258 11055432 YP_004789042.1 CDS Murru_2584 NC_015945.1 2859994 2860380 R KEGG: zpr:ZPR_3448 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2859994..2860380) Muricauda ruestringensis DSM 13258 11055433 YP_004789043.1 CDS Murru_2585 NC_015945.1 2860579 2862984 D PFAM: Aminotransferase class I and II; COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839; KEGG: gfo:GFO_1376 class-I/II aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: 8-amino-7-oxononanoate synthase; SPTR: Class-I/II aminotransferase; 8-amino-7-oxononanoate synthase 2860579..2862984 Muricauda ruestringensis DSM 13258 11055434 YP_004789044.1 CDS Murru_2586 NC_015945.1 2862997 2863836 D PFAM: RteC protein; InterPro IPR018534; KEGG: fps:FP1540 hypothetical protein; PFAM: Tetracycline regulation of excision, RteC; SPTR: Putative uncharacterized protein; Tetracycline regulation of excision, RteC 2862997..2863836 Muricauda ruestringensis DSM 13258 11055435 YP_004789045.1 CDS Murru_2587 NC_015945.1 2864123 2864401 D KEGG: zpr:ZPR_2233 putative DNA-binding protein; SPTR: Putative DNA-binding protein; putative DNA-binding protein 2864123..2864401 Muricauda ruestringensis DSM 13258 11055436 YP_004789046.1 CDS Murru_2588 NC_015945.1 2864404 2864943 D KEGG: zpr:ZPR_1275 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2864404..2864943 Muricauda ruestringensis DSM 13258 11055437 YP_004789047.1 CDS Murru_2589 NC_015945.1 2864940 2865602 D KEGG: zpr:ZPR_1274 ATPase; SPTR: ATPase; ATPase 2864940..2865602 Muricauda ruestringensis DSM 13258 11055438 YP_004789048.1 CDS Murru_2590 NC_015945.1 2865605 2865880 D hypothetical protein 2865605..2865880 Muricauda ruestringensis DSM 13258 11055439 YP_004789049.1 CDS Murru_2591 NC_015945.1 2866040 2866957 R PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase; COGs: COG1893 Ketopantoate reductase; InterPro IPR003710:IPR013332:IPR013752; KEGG: sli:Slin_2608 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, C-terminal; Ketopantoate reductase ApbA/PanE, N-terminal; SPTR: 2-dehydropantoate 2-reductase; TIGRFAM: Ketopantoate reductase ApbA/PanE; 2-dehydropantoate 2-reductase complement(2866040..2866957) Muricauda ruestringensis DSM 13258 11055440 YP_004789050.1 CDS Murru_2592 NC_015945.1 2866997 2867644 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; COGs: COG0637 phosphatase/phosphohexomutase; InterPro IPR006402:IPR006439:IPR005834; KEGG: vex:VEA_000391 2-deoxyglucose-6-phosphate hydrolase YniC; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Phosphatase YniC; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase complement(2866997..2867644) Muricauda ruestringensis DSM 13258 11055441 YP_004789051.1 CDS Murru_2593 NC_015945.1 2867635 2868285 R PFAM: TENA/THI-4/PQQC family; COGs: COG0819 Putative transcription activator; InterPro IPR004305; KEGG: zpr:ZPR_1973 putative transcriptional activator (TenA family protein); PFAM: TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C; SPTR: Putative transcriptional activator (TenA family protein); TenA family transcriptional activator complement(2867635..2868285) Muricauda ruestringensis DSM 13258 11055442 YP_004789052.1 CDS Murru_2594 NC_015945.1 2868272 2869105 R PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; COGs: COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; InterPro IPR004399:IPR013749; KEGG: zpr:ZPR_1974 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; PRIAM: Phosphomethylpyrimidine kinase; SPTR: Phosphomethylpyrimidine kinase; TIGRFAM: Phosphomethylpyrimidine kinase type-2; phosphomethylpyrimidine kinase complement(2868272..2869105) Muricauda ruestringensis DSM 13258 11055443 YP_004789053.1 CDS Murru_2595 NC_015945.1 2869102 2869740 R PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase; COGs: COG0352 Thiamine monophosphate synthase; HAMAP: Thiamine monophosphate synthase; InterPro IPR003733; KEGG: zpr:ZPR_1975 thiamine-phosphate pyrophosphorylase; PFAM: Thiamine monophosphate synthase; SPTR: Thiamine-phosphate pyrophosphorylase 1; TIGRFAM: Thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase complement(2869102..2869740) Muricauda ruestringensis DSM 13258 11055444 YP_004789054.1 CDS Murru_2596 NC_015945.1 2869737 2870540 R PFAM: Hydroxyethylthiazole kinase family; TIGRFAM: hydroxyethylthiazole kinase; COGs: COG2145 Hydroxyethylthiazole kinase sugar kinase family; HAMAP: Hydroxyethylthiazole kinase; InterPro IPR000417; KEGG: zpr:ZPR_1976 hydroxyethylthiazole kinase; PFAM: Hydroxyethylthiazole kinase; PRIAM: Hydroxyethylthiazole kinase; SPTR: Hydroxyethylthiazole kinase; TIGRFAM: Hydroxyethylthiazole kinase; hydroxyethylthiazole kinase complement(2869737..2870540) Muricauda ruestringensis DSM 13258 11055445 YP_004789055.1 CDS Murru_2597 NC_015945.1 2871058 2871345 D KEGG: zpr:ZPR_4001 membrane protein; SPTR: Putative uncharacterized protein; membrane protein 2871058..2871345 Muricauda ruestringensis DSM 13258 11055446 YP_004789056.1 CDS Murru_2598 NC_015945.1 2871345 2871623 D KEGG: gfo:GFO_1366 membrane protein; SPTR: Membrane protein; membrane protein 2871345..2871623 Muricauda ruestringensis DSM 13258 11055447 YP_004789057.1 CDS Murru_2599 NC_015945.1 2871616 2874027 D PFAM: Domain of unknown function DUF87; TIGRFAM: Bacteroides conjugation system ATPase, TraG family; COGs: COG3451 Type IV secretory pathway VirB4 protein; InterPro IPR022509; KEGG: zpr:ZPR_1269 type IV secretory pathway, VirB4 component; SPTR: Type IV secretory pathway, VirB4 component; TIGRFAM: Conjugation system ATPase, TraG; conjugation system ATPase, TraG family 2871616..2874027 Muricauda ruestringensis DSM 13258 11055448 YP_004789058.1 CDS Murru_2600 NC_015945.1 2874024 2874629 D PFAM: Type IV secretion system proteins; KEGG: gfo:GFO_1364 TraI-like secreted protein; SPTR: TraI-like secreted protein; TraI-like secreted protein 2874024..2874629 Muricauda ruestringensis DSM 13258 11055449 YP_004789059.1 CDS Murru_2601 NC_015945.1 2874629 2875468 D KEGG: zpr:ZPR_1267 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2874629..2875468 Muricauda ruestringensis DSM 13258 11055450 YP_004789060.1 CDS Murru_2602 NC_015945.1 2875481 2876107 D KEGG: zpr:ZPR_1266 conserved protein found in conjugate transposon; SPTR: Conserved protein found in conjugate transposon; conjugate transposon protein 2875481..2876107 Muricauda ruestringensis DSM 13258 11055451 YP_004789061.1 CDS Murru_2603 NC_015945.1 2876088 2877020 D PFAM: Protein of unknown function (DUF3714); KEGG: zpr:ZPR_1771 TraM-like protein; SPTR: TraM-like protein; TraM-like protein 2876088..2877020 Muricauda ruestringensis DSM 13258 11055452 YP_004789062.1 CDS Murru_2604 NC_015945.1 2877017 2877808 D KEGG: zpr:ZPR_1264 conserved protein found in conjugate transposon; SPTR: Conserved protein found in conjugate transposon; conjugate transposon protein 2877017..2877808 Muricauda ruestringensis DSM 13258 11055453 YP_004789063.1 CDS Murru_2606 NC_015945.1 2878758 2879678 R KEGG: fbc:FB2170_04820 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2878758..2879678) Muricauda ruestringensis DSM 13258 11055455 YP_004789064.1 CDS Murru_2607 NC_015945.1 2879668 2880255 R PFAM: YceI-like domain; InterPro IPR007372; KEGG: fbc:FB2170_04825 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: Putative uncharacterized protein; hypothetical protein complement(2879668..2880255) Muricauda ruestringensis DSM 13258 11055456 YP_004789065.1 CDS Murru_2608 NC_015945.1 2880206 2880643 R KEGG: fbc:FB2170_04830 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2880206..2880643) Muricauda ruestringensis DSM 13258 11055457 YP_004789066.1 CDS Murru_2609 NC_015945.1 2880750 2881991 R PFAM: Secreted repeat of unknown function; COGs: COG4315 conserved hypothetical protein; InterPro IPR005297; KEGG: fbc:FB2170_04840 putative lipoprotein; SPTR: Putative lipoprotein; hypothetical protein complement(2880750..2881991) Muricauda ruestringensis DSM 13258 11055458 YP_004789067.1 CDS Murru_2610 NC_015945.1 2882119 2882988 R KEGG: rbi:RB2501_00251 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2882119..2882988) Muricauda ruestringensis DSM 13258 11055459 YP_004789068.1 CDS Murru_2611 NC_015945.1 2882997 2883386 R KEGG: fjo:Fjoh_0164 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2882997..2883386) Muricauda ruestringensis DSM 13258 11055460 YP_004789069.1 CDS Murru_2612 NC_015945.1 2883376 2883951 R PFAM: YceI-like domain; InterPro IPR007372; KEGG: fjo:Fjoh_0167 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like; SPTR: Putative uncharacterized protein; hypothetical protein complement(2883376..2883951) Muricauda ruestringensis DSM 13258 11055461 YP_004789070.1 CDS Murru_2613 NC_015945.1 2883970 2884338 R KEGG: fjo:Fjoh_0166 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2883970..2884338) Muricauda ruestringensis DSM 13258 11055462 YP_004789071.1 CDS Murru_2614 NC_015945.1 2884554 2885621 D PFAM: LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR007492; KEGG: fbc:FB2170_04845 two-component system response regulator; PFAM: LytTr, DNA-binding domain; SMART: LytTr, DNA-binding domain; SPTR: Transcriptional regulator, LytTr family; response regulator receiver protein 2884554..2885621 Muricauda ruestringensis DSM 13258 11055463 YP_004789072.1 CDS Murru_2615 NC_015945.1 2885791 2886003 D hypothetical protein 2885791..2886003 Muricauda ruestringensis DSM 13258 11055464 YP_004789073.1 CDS Murru_2616 NC_015945.1 2886094 2886990 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: fjo:Fjoh_0873 LysR family transcriptional regulator; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; SPTR: Transcriptional regulator, LysR family; LysR family transcriptional regulator 2886094..2886990 Muricauda ruestringensis DSM 13258 11055465 YP_004789074.1 CDS Murru_2617 NC_015945.1 2887026 2887661 D PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; COGs: COG0450 Peroxiredoxin; InterPro IPR000866:IPR019479; KEGG: phe:Phep_2928 peroxidase; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Peroxiredoxin, C-terminal; PRIAM: Peroxidase; SPTR: Peroxidase; peroxidase 2887026..2887661 Muricauda ruestringensis DSM 13258 11055466 YP_004789075.1 CDS Murru_2618 NC_015945.1 2887658 2889445 D PFAM: Flavodoxin; FAD binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: sulfite reductase [NADPH] flavoprotein, alpha-component; COGs: COG0369 Sulfite reductase alpha subunit (flavoprotein); InterPro IPR010199:IPR008254:IPR003097:IPR001433; KEGG: bay:RBAM_030610 YvgR; PFAM: FAD-binding, type 1; Flavodoxin/nitric oxide synthase; Oxidoreductase FAD/NAD(P)-binding; PRIAM: NADPH--hemoprotein reductase; SPTR: Sulfite reductase [NADPH] flavoprotein, alpha-component; TIGRFAM: Sulphite reductase [NADPH] flavoprotein, alpha chain; sulfite reductase (NADPH) flavoprotein, alpha chain 2887658..2889445 Muricauda ruestringensis DSM 13258 11055467 YP_004789076.1 CDS Murru_2619 NC_015945.1 2889459 2891123 D PFAM: Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: sulfite reductase (NADPH) hemoprotein, beta-component; COGs: COG0155 Sulfite reductase beta subunit (hemoprotein); InterPro IPR011786:IPR005117:IPR006067; KEGG: afl:Aflv_1596 sulfite reductase subunit beta; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; PRIAM: Sulfite reductase (NADPH); SPTR: Sulfite reductase [NADPH] hemoprotein beta-component; TIGRFAM: Sulphite reductase (NADPH) hemoprotein, beta subunit; sulfite reductase (NADPH) hemoprotein subunit beta 2889459..2891123 Muricauda ruestringensis DSM 13258 11055468 YP_004789077.1 CDS Murru_2620 NC_015945.1 2891142 2892293 D PFAM: Cys/Met metabolism PLP-dependent enzyme; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: fbc:FB2170_10581 cystathionine beta-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; SPTR: Cystathionine beta-lyase; cys/Met metabolism pyridoxal-phosphate-dependent protein 2891142..2892293 Muricauda ruestringensis DSM 13258 11055469 YP_004789078.1 CDS Murru_2621 NC_015945.1 2892384 2893673 D PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase; COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterPro IPR006235:IPR000277; KEGG: gfo:GFO_0316 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cysteine synthase; SPTR: O-acetylhomoserine sulfhydrylase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; O-acetylhomoserine/O-acetylserine sulfhydrylase 2892384..2893673 Muricauda ruestringensis DSM 13258 11055470 YP_004789079.1 CDS Murru_2622 NC_015945.1 2893684 2894616 D PFAM: Ketopantoate reductase PanE/ApbA; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase; COGs: COG1893 Ketopantoate reductase; InterPro IPR003710:IPR013332:IPR013752; KEGG: gfo:GFO_3033 ketopantoate reductase PanE/ApbA; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; PRIAM: 2-dehydropantoate 2-reductase; SPTR: 2-dehydropantoate 2-reductase; TIGRFAM: Ketopantoate reductase ApbA/PanE; 2-dehydropantoate 2-reductase 2893684..2894616 Muricauda ruestringensis DSM 13258 11055471 YP_004789080.1 CDS Murru_2623 NC_015945.1 2894835 2895614 R KEGG: cat:CA2559_05660 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2894835..2895614) Muricauda ruestringensis DSM 13258 11055472 YP_004789081.1 CDS Murru_2624 NC_015945.1 2895628 2897130 R KEGG: sli:Slin_1165 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2895628..2897130) Muricauda ruestringensis DSM 13258 11055473 YP_004789082.1 CDS Murru_2625 NC_015945.1 2897140 2900220 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: cat:CA2559_05670 outer membrane protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein, probably involved in nutrient binding; TonB-dependent receptor plug complement(2897140..2900220) Muricauda ruestringensis DSM 13258 11055474 YP_004789083.1 CDS Murru_2626 NC_015945.1 2900235 2900471 R hypothetical protein complement(2900235..2900471) Muricauda ruestringensis DSM 13258 11055475 YP_004789084.1 CDS Murru_2627 NC_015945.1 2900722 2901666 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR018060:IPR000005; KEGG: fbc:FB2170_01247 DNA binding protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Putative uncharacterized protein; AraC family transcriptional regulator complement(2900722..2901666) Muricauda ruestringensis DSM 13258 11055476 YP_004789085.1 CDS Murru_2628 NC_015945.1 2901931 2902323 R COGs: COG2346 Truncated hemoglobins; KEGG: rbi:RB2501_10787 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2901931..2902323) Muricauda ruestringensis DSM 13258 11055477 YP_004789086.1 CDS Murru_2629 NC_015945.1 2902445 2902804 R PFAM: Protein of unknown function, DUF488; COGs: COG3189 conserved hypothetical protein; InterPro IPR007438; KEGG: gfo:GFO_0722 hypothetical protein; PFAM: Protein of unknown function DUF488; SPTR: Protein containing DUF488; hypothetical protein complement(2902445..2902804) Muricauda ruestringensis DSM 13258 11055478 YP_004789087.1 CDS Murru_2630 NC_015945.1 2902842 2903546 R PFAM: short chain dehydrogenase; COGs: COG4221 Short-chain alcohol dehydrogenase of unknown specificity; InterPro IPR002198; KEGG: rmr:Rmar_2639 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase complement(2902842..2903546) Muricauda ruestringensis DSM 13258 11055479 YP_004789088.1 CDS Murru_2631 NC_015945.1 2903551 2904018 R PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain; COGs: COG2128 conserved hypothetical protein; InterPro IPR004675:IPR003779; KEGG: ote:Oter_3729 alkylhydroperoxidase; PFAM: Carboxymuconolactone decarboxylase; SPTR: Alkylhydroperoxidase like protein, AhpD family; TIGRFAM: Alkylhydroperoxidase AhpD core; alkylhydroperoxidase complement(2903551..2904018) Muricauda ruestringensis DSM 13258 11055480 YP_004789089.1 CDS Murru_2632 NC_015945.1 2904030 2904344 R PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: alkylhydroperoxidase AhpD family core domain; COGs: COG0599 gamma-carboxymuconolactone decarboxylase subunit; InterPro IPR004675:IPR003779; KEGG: scl:sce7866 hypothetical protein; PFAM: Carboxymuconolactone decarboxylase; SPTR: Alkylhydroperoxidase; TIGRFAM: Alkylhydroperoxidase AhpD core; alkylhydroperoxidase complement(2904030..2904344) Muricauda ruestringensis DSM 13258 11055481 YP_004789090.1 CDS Murru_2633 NC_015945.1 2904369 2904785 R PFAM: OsmC-like protein; TIGRFAM: peroxiredoxin, OsmC subfamily; COGs: COG1764 redox protein regulator of disulfide bond formation; InterPro IPR019904:IPR003718; KEGG: ilo:IL2550 organic hydroperoxide reductase; PFAM: Peroxiredoxin, OsmC-like protein; SPTR: Organic hydroperoxide reductase; TIGRFAM: Peroxiredoxin, osmotically inducible protein C, subgroup; OsmC subfamily peroxiredoxin complement(2904369..2904785) Muricauda ruestringensis DSM 13258 11055482 YP_004789091.1 CDS Murru_2634 NC_015945.1 2904846 2907614 R PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1; COGs: COG1048 Aconitase A; InterPro IPR006249:IPR001030:IPR000573; KEGG: gfo:GFO_1390 aconitase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel; PRIAM: Aconitate hydratase; SPTR: Aconitase; TIGRFAM: Aconitase/iron regulatory protein 2; aconitate hydratase 1 complement(2904846..2907614) Muricauda ruestringensis DSM 13258 11055483 YP_004789092.1 CDS Murru_2635 NC_015945.1 2907763 2908056 R PFAM: Cupin domain; InterPro IPR013096; KEGG: gfo:GFO_1392 RmlC-like cupin family protein; PFAM: Cupin 2, conserved barrel; SPTR: RmlC-like cupin family protein; cupin 2 barrel domain-containing protein complement(2907763..2908056) Muricauda ruestringensis DSM 13258 11055484 YP_004789093.1 CDS Murru_2636 NC_015945.1 2908059 2908970 R PFAM: Tryptophan 2,3-dioxygenase; COGs: COG3483 Tryptophan 2 3-dioxygenase (vermilion); InterPro IPR004981; KEGG: fbc:FB2170_05105 hypothetical protein; PFAM: Tryptophan 2,3-dioxygenase; SPTR: Putative uncharacterized protein; tryptophan 23-dioxygenase complement(2908059..2908970) Muricauda ruestringensis DSM 13258 11055485 YP_004789094.1 CDS Murru_2637 NC_015945.1 2908974 2909411 R KEGG: lby:Lbys_0337 hypothetical protein; SPTR: Putative membrane protein; hypothetical protein complement(2908974..2909411) Muricauda ruestringensis DSM 13258 11055486 YP_004789095.1 CDS Murru_2638 NC_015945.1 2909408 2909797 R PFAM: Bacterial-like globin; COGs: COG2346 Truncated hemoglobins; KEGG: gfo:GFO_1394 globin family protein; SPTR: Bacterial-like globin family protein; globin family protein complement(2909408..2909797) Muricauda ruestringensis DSM 13258 11055487 YP_004789096.1 CDS Murru_2639 NC_015945.1 2909797 2910219 R KEGG: gfo:GFO_1395 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2909797..2910219) Muricauda ruestringensis DSM 13258 11055488 YP_004789097.1 CDS Murru_2640 NC_015945.1 2910206 2910493 R KEGG: gfo:GFO_1396 secreted protein; SPTR: Secreted protein; hypothetical protein complement(2910206..2910493) Muricauda ruestringensis DSM 13258 11055489 YP_004789098.1 CDS Murru_2641 NC_015945.1 2910497 2911552 R PFAM: Cytochrome c; Cytochrome C oxidase, mono-heme subunit/FixO; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit II; COGs: COG2993 Cbb3-type cytochrome oxidase cytochrome c subunit; InterPro IPR003468:IPR003088; KEGG: gfo:GFO_1397 cbb3-type cytochrome c oxidase subunit II; PFAM: Cytochrome c oxidase, monohaem subunit/FixO; Cytochrome c, class I; SPTR: Cbb3-type cytochrome c oxidase subunit II; cytochrome C oxidase mono-heme subunit/FixO complement(2910497..2911552) Muricauda ruestringensis DSM 13258 11055490 YP_004789099.1 CDS Murru_2642 NC_015945.1 2911521 2913347 R PFAM: Cytochrome C and Quinol oxidase polypeptide I; TIGRFAM: cytochrome c oxidase, cbb3-type, subunit I; COGs: COG3278 Cbb3-type cytochrome oxidase subunit 1; InterPro IPR000883; KEGG: gfo:GFO_1398 cbb3-type cytochrome c oxidase subunit I; PFAM: Cytochrome c oxidase, subunit I; PRIAM: Cytochrome-c oxidase; SPTR: Cbb3-type cytochrome c oxidase subunit I; cytochrome-c oxidase complement(2911521..2913347) Muricauda ruestringensis DSM 13258 11055491 YP_004789100.1 CDS Murru_2643 NC_015945.1 2913384 2913695 R hypothetical protein complement(2913384..2913695) Muricauda ruestringensis DSM 13258 11055492 YP_004789101.1 CDS Murru_2644 NC_015945.1 2913958 2914320 R KEGG: rbi:RB2501_04565 putative transmembrane protein; SPTR: Probable transmembrane protein; hypothetical protein complement(2913958..2914320) Muricauda ruestringensis DSM 13258 11055493 YP_004789102.1 CDS Murru_2645 NC_015945.1 2914421 2915101 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: rbi:RB2501_04575 RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(2914421..2915101) Muricauda ruestringensis DSM 13258 11055494 YP_004789103.1 CDS Murru_2646 NC_015945.1 2915312 2915977 D PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterPro IPR008333:IPR001433; KEGG: rbi:RB2501_04580 putative flavodoxin reductase; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase, FAD-binding domain; SPTR: Putative flavodoxin reductase; oxidoreductase FAD/NAD(P)-binding domain-containing protein 2915312..2915977 Muricauda ruestringensis DSM 13258 11055495 YP_004789104.1 CDS Murru_2647 NC_015945.1 2915989 2916636 D PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; COGs: COG0302 GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; InterPro IPR001474:IPR020602; KEGG: rbi:RB2501_04585 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: GTP cyclohydrolase I; SPTR: GTP cyclohydrolase 1 2; TIGRFAM: GTP cyclohydrolase I; GTP cyclohydrolase 1 2915989..2916636 Muricauda ruestringensis DSM 13258 11055496 YP_004789105.1 CDS Murru_2648 NC_015945.1 2916701 2917219 D COGs: COG3652 outer membrane protein; KEGG: rbi:RB2501_04590 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2916701..2917219 Muricauda ruestringensis DSM 13258 11055497 YP_004789106.1 CDS Murru_2649 NC_015945.1 2917224 2917574 D PFAM: Copper binding proteins, plastocyanin/azurin family; COGs: COG3794 Plastocyanin; InterPro IPR000923; KEGG: rbi:RB2501_04595 hypothetical protein; PFAM: Blue (type 1) copper domain; SPTR: Putative uncharacterized protein; blue (type 1) copper domain-containing protein 2917224..2917574 Muricauda ruestringensis DSM 13258 11055498 YP_004789107.1 CDS Murru_2650 NC_015945.1 2917669 2919021 D KEGG: rbi:RB2501_04600 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2917669..2919021 Muricauda ruestringensis DSM 13258 11055499 YP_004789108.1 CDS Murru_2651 NC_015945.1 2919196 2919300 D hypothetical protein 2919196..2919300 Muricauda ruestringensis DSM 13258 11055500 YP_004789109.1 CDS Murru_2652 NC_015945.1 2919285 2920073 D PFAM: CAAX amino terminal protease family; InterPro IPR003675; KEGG: rbi:RB2501_04605 hypothetical protein; PFAM: Abortive infection protein; SPTR: Putative uncharacterized protein; abortive infection protein 2919285..2920073 Muricauda ruestringensis DSM 13258 11055501 YP_004789110.1 CDS Murru_2653 NC_015945.1 2920168 2923323 D PFAM: ResB-like family; Cytochrome C assembly protein; TIGRFAM: cytochrome c-type biogenesis protein CcsB; COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541; KEGG: rbi:RB2501_04610 cytochrome c assembly protein; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c assembly protein; cytochrome c assembly protein 2920168..2923323 Muricauda ruestringensis DSM 13258 11055502 YP_004789111.1 CDS Murru_2654 NC_015945.1 2923320 2924777 R PFAM: Pyridoxal-dependent decarboxylase conserved domain; COGs: COG0076 Glutamate decarboxylase and related PLP-dependent protein; InterPro IPR002129; KEGG: fbc:FB2170_14043 aromatic-L-amino-acid decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase; PRIAM: Aromatic-L-amino-acid decarboxylase; SPTR: Aromatic-L-amino-acid decarboxylase; aromatic-L-amino-acid decarboxylase complement(2923320..2924777) Muricauda ruestringensis DSM 13258 11055503 YP_004789112.1 CDS Murru_2655 NC_015945.1 2924784 2925500 R PFAM: Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; COGs: COG1018 Flavodoxin reductase (ferredoxin-NADPH reductase) family 1; InterPro IPR008333:IPR001433; KEGG: rbi:RB2501_04615 putative flavodoxin reductase; PFAM: Oxidoreductase FAD/NAD(P)-binding; Oxidoreductase, FAD-binding domain; SPTR: Putative flavodoxin reductase; oxidoreductase FAD/NAD(P)-binding domain-containing protein complement(2924784..2925500) Muricauda ruestringensis DSM 13258 11055504 YP_004789113.1 CDS Murru_2656 NC_015945.1 2925581 2925886 R hypothetical protein complement(2925581..2925886) Muricauda ruestringensis DSM 13258 11055505 YP_004789114.1 CDS Murru_2657 NC_015945.1 2925896 2926228 R PFAM: Bacterial-like globin; COGs: COG2346 Truncated hemoglobins; KEGG: lby:Lbys_0336 globin family protein; SPTR: Bacterial-like globin family protein; globin family protein complement(2925896..2926228) Muricauda ruestringensis DSM 13258 11055506 YP_004789115.1 CDS Murru_2658 NC_015945.1 2926456 2926977 D PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase; COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: fma:FMG_1186 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 2926456..2926977 Muricauda ruestringensis DSM 13258 11055507 YP_004789116.1 CDS Murru_2660 NC_015945.1 2928061 2928384 R KEGG: fjo:Fjoh_1582 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2928061..2928384) Muricauda ruestringensis DSM 13258 11055509 YP_004789117.1 CDS Murru_2661 NC_015945.1 2928365 2928826 R KEGG: mtt:Ftrac_2728 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2928365..2928826) Muricauda ruestringensis DSM 13258 11055510 YP_004789118.1 CDS Murru_2663 NC_015945.1 2929629 2930063 R PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: gfo:GFO_1399 Rrf2-like transcriptional regulator protein; PFAM: Transcription regulator Rrf2; SPTR: Rrf2-like transcriptional regulator protein; TIGRFAM: Transcription regulator Rrf2; BadM/Rrf2 family transcriptional regulator complement(2929629..2930063) Muricauda ruestringensis DSM 13258 11055512 YP_004789119.1 CDS Murru_2664 NC_015945.1 2930117 2930287 D hypothetical protein 2930117..2930287 Muricauda ruestringensis DSM 13258 11055513 YP_004789120.1 CDS Murru_2665 NC_015945.1 2930647 2931990 R PFAM: Voltage gated chloride channel; COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807; KEGG: gfo:GFO_0721 voltage gated chloride channel; PFAM: Chloride channel, voltage gated; SPTR: Voltage gated chloride channel; Cl- channel voltage-gated family protein complement(2930647..2931990) Muricauda ruestringensis DSM 13258 11055514 YP_004789121.1 CDS Murru_2666 NC_015945.1 2932182 2933633 R PFAM: Pyridoxal-dependent decarboxylase conserved domain; COGs: COG0076 Glutamate decarboxylase and related PLP-dependent protein; InterPro IPR002129; KEGG: sti:Sthe_2364 pyridoxal-dependent decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase; PRIAM: Sulfinoalanine decarboxylase; SPTR: Putative uncharacterized protein; Sulfinoalanine decarboxylase complement(2932182..2933633) Muricauda ruestringensis DSM 13258 11055515 YP_004789122.1 CDS Murru_2667 NC_015945.1 2934195 2934905 R PFAM: SCO1/SenC; COGs: COG1999 Uncharacterized protein SCO1/SenC/PrrC involved in biogenesis of respiratory and photosynthetic systems; InterPro IPR003782; KEGG: fbc:FB2170_14913 SCO1/SenC/PrrC family protein; PFAM: Copper chaperone SCO1/SenC; SPTR: Uncharacterized secreted protein of SCO1/SenC/PrrC family; electron transport protein SCO1/SenC complement(2934195..2934905) Muricauda ruestringensis DSM 13258 11055516 YP_004789123.1 CDS Murru_2668 NC_015945.1 2934917 2935696 R PFAM: Formylglycine-generating sulfatase enzyme; COGs: COG1262 conserved hypothetical protein; InterPro IPR005532; KEGG: fbc:FB2170_14918 hypothetical protein; PFAM: Sulphatase-modifying factor; SPTR: Putative uncharacterized protein; sulfatase-modifying factor protein complement(2934917..2935696) Muricauda ruestringensis DSM 13258 11055517 YP_004789124.1 CDS Murru_2669 NC_015945.1 2935718 2937157 R PFAM: Multicopper oxidase; Cytochrome c; TIGRFAM: nitrite reductase, copper-containing; COGs: COG2132 Putative multicopper oxidase; InterPro IPR001287:IPR011706:IPR001117:IPR003088; KEGG: fbc:FB2170_14923 putative nitrite reductase; PFAM: Cytochrome c, class I; Multicopper oxidase, type 2; Multicopper oxidase, type 1; PRIAM: Nitrite reductase (NO-forming); SPTR: Probable nitrite reductase; TIGRFAM: Nitrite reductase, copper containing; nitrite reductase complement(2935718..2937157) Muricauda ruestringensis DSM 13258 11055518 YP_004789125.1 CDS Murru_2670 NC_015945.1 2937267 2937572 R PFAM: Cyclic nucleotide-binding domain; InterPro IPR000595; KEGG: chu:CHU_2876 cyclic nucleotide binding regulatory protein; PFAM: Cyclic nucleotide-binding domain; SPTR: Putative transcriptional regulator, Crp/Fnr family; cyclic nucleotide-binding protein complement(2937267..2937572) Muricauda ruestringensis DSM 13258 11055519 YP_004789126.1 CDS Murru_2671 NC_015945.1 2938024 2938851 D PFAM: Trehalose utilisation; COGs: COG3828 conserved hypothetical protein; KEGG: cce:Ccel_0213 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2938024..2938851 Muricauda ruestringensis DSM 13258 11055520 YP_004789127.1 CDS Murru_2672 NC_015945.1 2938861 2940093 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: mma:MM_3157 putative 6-aminohexanoate-dimer hydrolase; PFAM: Beta-lactamase-related; SPTR: Putative 6-aminohexanoate-dimer hydrolase; beta-lactamase 2938861..2940093 Muricauda ruestringensis DSM 13258 11055521 YP_004789128.1 CDS Murru_2673 NC_015945.1 2940236 2941195 D PFAM: Trehalose utilisation; COGs: COG3828 conserved hypothetical protein; KEGG: gym:GYMC10_3792 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2940236..2941195 Muricauda ruestringensis DSM 13258 11055522 YP_004789129.1 CDS Murru_2674 NC_015945.1 2941452 2942594 D PFAM: 3-carboxy-cis,cis-muconate lactonizing enzyme; COGs: COG2706 3-carboxymuconate cyclase; InterPro IPR019405; KEGG: sus:Acid_6335 hypothetical protein; PFAM: Lactonase, 7-bladed beta propeller; SPTR: Putative uncharacterized protein; lactonase 2941452..2942594 Muricauda ruestringensis DSM 13258 11055523 YP_004789130.1 CDS Murru_2675 NC_015945.1 2942628 2943563 D PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: mep:MPQ_0940 smp-30/gluconolaconase/lre domain protein; SPTR: SMP-30/Gluconolaconase/LRE-like region family; smp-30/gluconolaconase/lre domain-containing protein 2942628..2943563 Muricauda ruestringensis DSM 13258 11055524 YP_004789131.1 CDS Murru_2676 NC_015945.1 2943788 2944786 D KEGG: sus:Acid_3986 PKD domain-containing protein; SPTR: PKD domain containing protein; PKD domain-containing protein 2943788..2944786 Muricauda ruestringensis DSM 13258 11055525 YP_004789132.1 CDS Murru_2677 NC_015945.1 2945040 2945156 R hypothetical protein complement(2945040..2945156) Muricauda ruestringensis DSM 13258 11055526 YP_004789133.1 CDS Murru_2678 NC_015945.1 2945209 2945766 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR014327:IPR007627:IPR013249; KEGG: zpr:ZPR_1753 RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(2945209..2945766) Muricauda ruestringensis DSM 13258 11055527 YP_004789134.1 CDS Murru_2679 NC_015945.1 2945909 2947063 D PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: fjo:Fjoh_2007 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR; anti-FecI sigma factor FecR 2945909..2947063 Muricauda ruestringensis DSM 13258 11055528 YP_004789135.1 CDS Murru_2680 NC_015945.1 2947245 2950622 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR011662:IPR012910:IPR000531; KEGG: bvu:BVU_0389 hypothetical protein; PFAM: TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent receptor, beta-barrel; SPTR: Putative uncharacterized protein; TonB-dependent receptor plug 2947245..2950622 Muricauda ruestringensis DSM 13258 11055529 YP_004789136.1 CDS Murru_2681 NC_015945.1 2950633 2952207 D PFAM: SusD family; InterPro IPR012944; KEGG: dfe:Dfer_2208 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 2950633..2952207 Muricauda ruestringensis DSM 13258 11055530 YP_004789137.1 CDS Murru_2682 NC_015945.1 2952758 2954497 D PFAM: Cytochrome c; Glucose / Sorbosone dehydrogenase; COGs: COG2133 Glucose/sorbosone dehydrogenase; InterPro IPR003088; KEGG: fbc:FB2170_15068 L-sorbosone dehydrogenase; PFAM: Cytochrome c, class I; SPTR: L-sorbosone dehydrogenase; cytochrome c class I 2952758..2954497 Muricauda ruestringensis DSM 13258 11055531 YP_004789138.1 CDS Murru_2683 NC_015945.1 2954595 2955371 D PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: fbc:FB2170_08784 short-chain alcohol dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short-chain alcohol dehydrogenase; 3-oxoacyl-ACP reductase 2954595..2955371 Muricauda ruestringensis DSM 13258 11055532 YP_004789139.1 CDS Murru_2684 NC_015945.1 2955422 2956276 D PFAM: Fumarylacetoacetate (FAA) hydrolase family; COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: zpr:ZPR_4369 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase; PFAM: Fumarylacetoacetase, C-terminal-like; PRIAM: Ureidoglycolate lyase; SPTR: 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase; ureidoglycolate lyase 2955422..2956276 Muricauda ruestringensis DSM 13258 11055533 YP_004789140.1 CDS Murru_2685 NC_015945.1 2956287 2957435 D PFAM: FMN-dependent dehydrogenase; COGs: COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenase; InterPro IPR000262; KEGG: fbc:FB2170_17401 L-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase; PFAM: FMN-dependent dehydrogenase; PRIAM: L-lactate dehydrogenase (cytochrome); SPTR: L-lactate dehydrogenase and related alpha-hydroxy acid dehydrogenase; L-lactate dehydrogenase (cytochrome) 2956287..2957435 Muricauda ruestringensis DSM 13258 11055534 YP_004789141.1 CDS Murru_2686 NC_015945.1 2957464 2957607 D hypothetical protein 2957464..2957607 Muricauda ruestringensis DSM 13258 11055535 YP_004789142.1 CDS Murru_2687 NC_015945.1 2957594 2960032 D PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: phosphoenolpyruvate synthase; COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterPro IPR006319:IPR002192:IPR008279:IPR000121; KEGG: pmx:PERMA_0568 phosphoenolpyruvate synthase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme; PRIAM: Pyruvate, water dikinase; SPTR: Phosphoenolpyruvate synthase; TIGRFAM: Phosphoenolpyruvate synthase; phosphoenolpyruvate synthase 2957594..2960032 Muricauda ruestringensis DSM 13258 11055536 YP_004789143.1 CDS Murru_2688 NC_015945.1 2960220 2961449 D PFAM: Major Facilitator Superfamily; InterPro IPR011701; KEGG: fbc:FB2170_14638 hypothetical protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; major facilitator superfamily protein 2960220..2961449 Muricauda ruestringensis DSM 13258 11055537 YP_004789144.1 CDS Murru_2690 NC_015945.1 2962310 2962525 D PFAM: Helix-turn-helix; TIGRFAM: transcriptional regulator, y4mF family; InterPro IPR001387; KEGG: lpn:lpg2377 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; helix-turn-helix domain-containing protein 2962310..2962525 Muricauda ruestringensis DSM 13258 11055539 YP_004789145.1 CDS Murru_2691 NC_015945.1 2962522 2962839 D TIGRFAM: HipA N-terminal domain; InterPro IPR017508; KEGG: lpa:lpa_03436 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: HipA, N-terminal; HipA N-terminal domain-containing protein 2962522..2962839 Muricauda ruestringensis DSM 13258 11055540 YP_004789146.1 CDS Murru_2692 NC_015945.1 2962832 2963755 D PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain; COGs: COG3550 conserved hypothetical protein; InterPro IPR012894:IPR012893; KEGG: lpn:lpg2370 hypothetical protein; PFAM: HipA-like, N-terminal; HipA-like, C-terminal; SPTR: Putative uncharacterized protein; HipA domain-containing protein 2962832..2963755 Muricauda ruestringensis DSM 13258 11055541 YP_004789147.1 CDS Murru_2693 NC_015945.1 2964171 2967332 R PFAM: Peptidase family M1; KEGG: rbi:RB2501_10902 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2964171..2967332) Muricauda ruestringensis DSM 13258 11055542 YP_004789148.1 CDS Murru_2694 NC_015945.1 2967329 2968204 R PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: rbi:RB2501_10907 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC superfamily ATP binding cassette transporter ABC protein; phosphonate-transporting ATPase complement(2967329..2968204) Muricauda ruestringensis DSM 13258 11055543 YP_004789149.1 CDS Murru_2695 NC_015945.1 2968226 2968429 R PFAM: Helix-turn-helix; COGs: COG3655 transcriptional regulator protein; InterPro IPR001387; KEGG: fjo:Fjoh_1981 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator; manually curated; XRE family transcriptional regulator complement(2968226..2968429) Muricauda ruestringensis DSM 13258 11055544 YP_004789150.1 CDS Murru_2696 NC_015945.1 2968433 2968942 R KEGG: fjo:Fjoh_1982 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2968433..2968942) Muricauda ruestringensis DSM 13258 11055545 YP_004789151.1 CDS Murru_2698 NC_015945.1 2969837 2970466 R PFAM: Nitroreductase family; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: rbi:RB2501_10892 hypothetical protein; PFAM: Nitroreductase-like; SPTR: Putative uncharacterized protein; nitroreductase complement(2969837..2970466) Muricauda ruestringensis DSM 13258 11055547 YP_004789152.1 CDS Murru_2699 NC_015945.1 2970506 2970955 R PFAM: Protein of unknown function, DUF606; COGs: COG3238 conserved hypothetical protein; InterPro IPR006750; KEGG: fbc:FB2170_00270 hypothetical protein; PFAM: Protein of unknown function DUF606; SPTR: Putative uncharacterized protein; hypothetical protein complement(2970506..2970955) Muricauda ruestringensis DSM 13258 11055548 YP_004789153.1 CDS Murru_2700 NC_015945.1 2971131 2972591 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: rbi:RB2501_10862 beta-lactamase; PFAM: Beta-lactamase-related; PRIAM: D-stereospecific aminopeptidase; SPTR: Beta-lactamase; D-stereospecific aminopeptidase 2971131..2972591 Muricauda ruestringensis DSM 13258 11055549 YP_004789154.1 CDS Murru_2701 NC_015945.1 2972596 2973933 D PFAM: Amidohydrolase family; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: rbi:RB2501_10857 amidohydrolase family enzyme; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase family enzyme; amidohydrolase 2972596..2973933 Muricauda ruestringensis DSM 13258 11055550 YP_004789155.1 CDS Murru_2702 NC_015945.1 2973937 2974281 D COGs: COG3232 5-carboxymethyl-2-hydroxymuconate isomerase; KEGG: fbc:FB2170_00320 putative 5-carboxymethyl-2-hydroxymuconate delta-isomerase; SPTR: Putative 5-carboxymethyl-2-hydroxymuconate delta-isomerase; putative 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2973937..2974281 Muricauda ruestringensis DSM 13258 11055551 YP_004789156.1 CDS Murru_2703 NC_015945.1 2974291 2975433 D PFAM: Putative esterase; COGs: COG2819 hydrolase of the alpha/beta superfamily; InterPro IPR000801; KEGG: fbc:FB2170_09501 putative esterase; PFAM: Putative esterase; SPTR: Putative esterase; esterase 2974291..2975433 Muricauda ruestringensis DSM 13258 11055552 YP_004789157.1 CDS Murru_2704 NC_015945.1 2975438 2975899 D KEGG: rbi:RB2501_06905 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2975438..2975899 Muricauda ruestringensis DSM 13258 11055553 YP_004789158.1 CDS Murru_2705 NC_015945.1 2976120 2977217 D PFAM: DJ-1/PfpI family; COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR002818; KEGG: cps:CPS_1285 DJ-1/PfpI family protein; PFAM: ThiJ/PfpI; SPTR: DJ-1/PfpI family protein; ThiJ/PfpI domain-containing protein 2976120..2977217 Muricauda ruestringensis DSM 13258 11055554 YP_004789159.1 CDS Murru_2706 NC_015945.1 2977225 2977320 D hypothetical protein 2977225..2977320 Muricauda ruestringensis DSM 13258 11055555 YP_004789160.1 CDS Murru_2707 NC_015945.1 2977305 2978201 D KEGG: ttu:TERTU_3395 metallo-beta-lactamase domain protein; SPTR: Metallo-beta-lactamase domain protein; hypothetical protein 2977305..2978201 Muricauda ruestringensis DSM 13258 11055556 YP_004789161.1 CDS Murru_2708 NC_015945.1 2978241 2978540 R PFAM: Antibiotic biosynthesis monooxygenase; KEGG: pla:Plav_1379 antibiotic biosynthesis monooxygenase; SPTR: Putative uncharacterized protein; antibiotic biosynthesis monooxygenase complement(2978241..2978540) Muricauda ruestringensis DSM 13258 11055557 YP_004789162.1 CDS Murru_2709 NC_015945.1 2978565 2978966 R PFAM: DoxX; InterPro IPR011637; KEGG: lby:Lbys_2858 DoxX family protein; PFAM: Uncharacterised protein family YphA; SPTR: DoxX protein; DoxX family protein complement(2978565..2978966) Muricauda ruestringensis DSM 13258 11055558 YP_004789163.1 CDS Murru_2710 NC_015945.1 2978984 2979607 R KEGG: lby:Lbys_2857 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2978984..2979607) Muricauda ruestringensis DSM 13258 11055559 YP_004789164.1 CDS Murru_2711 NC_015945.1 2979774 2980502 R PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: rbi:RB2501_10887 hypothetical protein; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Acetyltransferase, gnat family; N-acetyltransferase GCN5 complement(2979774..2980502) Muricauda ruestringensis DSM 13258 11055560 YP_004789165.1 CDS Murru_2712 NC_015945.1 2980587 2981168 R PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: rbi:RB2501_10872 hypothetical protein; PFAM: Cyclic nucleotide-binding domain; SPTR: Putative uncharacterized protein; putative Crp/Fnr family transcriptional regulator complement(2980587..2981168) Muricauda ruestringensis DSM 13258 11055561 YP_004789166.1 CDS Murru_2713 NC_015945.1 2981338 2982018 D KEGG: mac:MA2339 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2981338..2982018 Muricauda ruestringensis DSM 13258 11055562 YP_004789167.1 CDS Murru_2714 NC_015945.1 2982034 2982609 R PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: dfe:Dfer_0777 putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; SPTR: Putative transcriptional regulator, Crp/Fnr family; putative Crp/Fnr family transcriptional regulator complement(2982034..2982609) Muricauda ruestringensis DSM 13258 11055563 YP_004789168.1 CDS Murru_2715 NC_015945.1 2982730 2983110 R PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: rbi:RB2501_10897 hypothetical protein; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Putative uncharacterized protein; bleomycin resistance protein complement(2982730..2983110) Muricauda ruestringensis DSM 13258 11055564 YP_004789169.1 CDS Murru_2717 NC_015945.1 2984583 2985023 D hypothetical protein 2984583..2985023 Muricauda ruestringensis DSM 13258 11055566 YP_004789170.1 CDS Murru_2718 NC_015945.1 2985082 2986362 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: zpr:ZPR_4375 RND family efflux transporter MFP subunit; PFAM: Secretion protein HlyD; SPTR: RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 2985082..2986362 Muricauda ruestringensis DSM 13258 11055567 YP_004789171.1 CDS Murru_2719 NC_015945.1 2986469 2989639 D PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR004764:IPR001036; KEGG: zpr:ZPR_4374 hydrophobe/amphiphile efflux-1 (HAE1) family protein; PFAM: Acriflavin resistance protein; SPTR: Hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter 2986469..2989639 Muricauda ruestringensis DSM 13258 11055568 YP_004789172.1 CDS Murru_2720 NC_015945.1 2989657 2991126 D PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: zpr:ZPR_4373 outer membrane protein; PFAM: Outer membrane efflux protein; SPTR: Outer membrane protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein 2989657..2991126 Muricauda ruestringensis DSM 13258 11055569 YP_004789173.1 CDS Murru_2721 NC_015945.1 2991193 2992080 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: zpr:ZPR_4372 bacterial regulatory helix-turn-helix protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Bacterial regulatory helix-turn-helix protein; AraC family transcriptional regulator 2991193..2992080 Muricauda ruestringensis DSM 13258 11055570 YP_004789174.1 CDS Murru_2722 NC_015945.1 2992190 2992858 D PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: zpr:ZPR_4371 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Short chain dehydrogenase; short-chain dehydrogenase/reductase SDR 2992190..2992858 Muricauda ruestringensis DSM 13258 11055571 YP_004789175.1 CDS Murru_2723 NC_015945.1 2992789 2992962 R hypothetical protein complement(2992789..2992962) Muricauda ruestringensis DSM 13258 11055572 YP_004789176.1 CDS Murru_2725 NC_015945.1 2993377 2994957 R InterPro IPR006680; KEGG: mtt:Ftrac_2237 amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase family enzyme; amidohydrolase complement(2993377..2994957) Muricauda ruestringensis DSM 13258 11055574 YP_004789177.1 CDS Murru_2726 NC_015945.1 2995198 2995737 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: cpi:Cpin_3286 RNA polymerase, sigma-24 subunit, ECF subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma-70 factor, ECF subfamily protein; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(2995198..2995737) Muricauda ruestringensis DSM 13258 11055575 YP_004789178.1 CDS Murru_2727 NC_015945.1 2995907 2997067 D PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: fjo:Fjoh_3336 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Anti-FecI sigma factor, FecR; anti-FecI sigma factor FecR 2995907..2997067 Muricauda ruestringensis DSM 13258 11055576 YP_004789179.1 CDS Murru_2728 NC_015945.1 2997230 3000790 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: gfo:GFO_2846 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent outer membrane receptor; TonB-dependent receptor plug 2997230..3000790 Muricauda ruestringensis DSM 13258 11055577 YP_004789180.1 CDS Murru_2729 NC_015945.1 3000810 3002228 D KEGG: fjo:Fjoh_0404 hypothetical protein; SPTR: RagB/SusD domain protein; hypothetical protein 3000810..3002228 Muricauda ruestringensis DSM 13258 11055578 YP_004789181.1 CDS Murru_2730 NC_015945.1 3002469 3003968 D PFAM: Serine carboxypeptidase; COGs: COG2939 Carboxypeptidase C (cathepsin A); InterPro IPR001563; KEGG: mtt:Ftrac_0656 peptidase S10 serine carboxypeptidase; PFAM: Peptidase S10, serine carboxypeptidase; SPTR: Peptidase S10 serine carboxypeptidase; peptidase S10 serine carboxypeptidase 3002469..3003968 Muricauda ruestringensis DSM 13258 11055579 YP_004789182.1 CDS Murru_2731 NC_015945.1 3004015 3005622 D PFAM: Amidohydrolase family; COGs: COG1228 Imidazolonepropionase and related amidohydrolase; InterPro IPR006680; KEGG: mtt:Ftrac_2237 amidohydrolase; PFAM: Amidohydrolase 1; SPTR: Amidohydrolase family enzyme; amidohydrolase 3004015..3005622 Muricauda ruestringensis DSM 13258 11055580 YP_004789183.1 CDS Murru_2732 NC_015945.1 3005869 3007062 D PFAM: Proline dehydrogenase; InterPro IPR002872; KEGG: fbc:FB2170_10826 CpmD protein involved in carbapenem biosynthesis; PFAM: Proline dehydrogenase; PRIAM: Proline dehydrogenase; SPTR: Proline dehydrogenase; proline dehydrogenase 3005869..3007062 Muricauda ruestringensis DSM 13258 11055581 YP_004789184.1 CDS Murru_2733 NC_015945.1 3007194 3008822 R PFAM: Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 1; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR005931:IPR015590; KEGG: fbc:FB2170_16741 delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde dehydrogenase domain; PRIAM: 1-pyrroline-5-carboxylate dehydrogenase; SPTR: Delta-1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 1; delta-1-pyrroline-5-carboxylate dehydrogenase complement(3007194..3008822) Muricauda ruestringensis DSM 13258 11055582 YP_004789185.1 CDS Murru_2735 NC_015945.1 3009336 3009713 R KEGG: rbi:RB2501_01196 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3009336..3009713) Muricauda ruestringensis DSM 13258 11055584 YP_004789186.1 CDS Murru_2736 NC_015945.1 3009703 3011568 R PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; TIGRFAM: PAS domain S-box; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR000014:IPR003594:IPR011712; KEGG: fjo:Fjoh_4627 multi-sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; SPTR: Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS; putative signal transduction histidine kinase complement(3009703..3011568) Muricauda ruestringensis DSM 13258 11055585 YP_004789187.1 CDS Murru_2737 NC_015945.1 3011578 3012168 R KEGG: fjo:Fjoh_4626 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3011578..3012168) Muricauda ruestringensis DSM 13258 11055586 YP_004789188.1 CDS Murru_2738 NC_015945.1 3012189 3012566 R PFAM: Rieske [2Fe-2S] domain; TIGRFAM: nitrite reductase [NAD(P)H], small subunit; COGs: COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase; InterPro IPR012748:IPR017941; KEGG: fjo:Fjoh_4625 nitrite reductase (NAD(P)H), small subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; SPTR: Nitrite reductase [NAD(P)H], small subunit; TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirD; nitrite reductase (NAD(P)H) small subunit complement(3012189..3012566) Muricauda ruestringensis DSM 13258 11055587 YP_004789189.1 CDS Murru_2739 NC_015945.1 3012577 3015096 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S] binding domain; Nitrite and sulphite reductase 4Fe-4S domain; Nitrite/Sulfite reductase ferredoxin-like half domain; TIGRFAM: nitrite reductase [NAD(P)H], large subunit; COGs: COG1251 NAD(P)H-nitrite reductase; InterProIPR012744:IPR013027:IPR007419:IPR005117:IPR 006067; KEGG: fjo:Fjoh_4624 nitrite reductase (NAD(P)H), large subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; Nitrite/sulphite reductase 4Fe-4S domain; PRIAM: Nitrite reductase (NAD(P)H); SPTR: Nitrite reductase [NAD(P)H], large subunit; TIGRFAM: Nitrite reductase [NAD(P)H] large subunit, NirB; nitrite reductase (NAD(P)H) large subunit complement(3012577..3015096) Muricauda ruestringensis DSM 13258 11055588 YP_004789190.1 CDS Murru_2740 NC_015945.1 3015218 3015994 D PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR006366:IPR000878; KEGG: sli:Slin_5405 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; PRIAM: Uroporphyrinogen-III C-methyltransferase; SPTR: Uroporphyrin-III C-methyltransferase; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; uroporphyrin-III C-methyltransferase 3015218..3015994 Muricauda ruestringensis DSM 13258 11055589 YP_004789191.1 CDS Murru_2741 NC_015945.1 3016203 3017603 D PFAM: Major Facilitator Superfamily; TIGRFAM: nitrite extrusion protein (nitrite facilitator); COGs: COG2223 Nitrate/nitrite transporter; InterPro IPR011701; KEGG: lbf:LBF_2686 nitrate/nitrite transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily transporter; major facilitator superfamily protein 3016203..3017603 Muricauda ruestringensis DSM 13258 11055590 YP_004789192.1 CDS Murru_2742 NC_015945.1 3017655 3018947 D KEGG: fbc:FB2170_14903 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3017655..3018947 Muricauda ruestringensis DSM 13258 11055591 YP_004789193.1 CDS Murru_2743 NC_015945.1 3019046 3019729 D PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: fjo:Fjoh_4628 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SPTR: Two component transcriptional regulator, LuxR family; two component LuxR family transcriptional regulator 3019046..3019729 Muricauda ruestringensis DSM 13258 11055592 YP_004789194.1 CDS Murru_2744 NC_015945.1 3019863 3023396 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; BFD-like [2Fe-2S] binding domain; Molybdopterin oxidoreductase Fe4S4 domain; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR006963:IPR006656:IPR006657:IPR013027:IPR 007419; KEGG: fjo:Fjoh_4633 molybdopterin oxidoreductase; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase, Fe4S4 domain; Molydopterin dinucleotide-binding domain; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD-like [2Fe-2S]-binding domain; PRIAM: Nitrate reductase., Nitrite reductase (NAD(P)H); SMART: Molybdopterin oxidoreductase, Fe4S4 domain; SPTR: Nitrate reductase; Nitrate reductase., Nitrite reductase (NAD(P)H) 3019863..3023396 Muricauda ruestringensis DSM 13258 11055593 YP_004789195.1 CDS Murru_2745 NC_015945.1 3023401 3024840 D PFAM: Rubredoxin; COGs: COG1773 Rubredoxin; InterPro IPR004039; KEGG: fjo:Fjoh_4634 rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubredoxin; Rubredoxin-type Fe(cys)4 protein 3023401..3024840 Muricauda ruestringensis DSM 13258 11055594 YP_004789196.1 CDS Murru_2748 NC_015945.1 3026290 3027141 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: cyn:Cyan7425_0099 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Transcriptional regulator, AraC family; AraC family transcriptional regulator 3026290..3027141 Muricauda ruestringensis DSM 13258 11055597 YP_004789197.1 CDS Murru_2749 NC_015945.1 3027288 3027788 D hypothetical protein 3027288..3027788 Muricauda ruestringensis DSM 13258 11055598 YP_004789198.1 CDS Murru_2750 NC_015945.1 3027819 3028397 D KEGG: rbi:RB2501_09300 outer membrane protein-like peptidoglycan-associated (LipO)protein; SPTR: Outer membrane protein-like peptidoglycan-associated (Lipo)protein; hypothetical protein 3027819..3028397 Muricauda ruestringensis DSM 13258 11055599 YP_004789199.1 CDS Murru_2751 NC_015945.1 3028415 3029113 D SPTR: Putative uncharacterized protein; hypothetical protein 3028415..3029113 Muricauda ruestringensis DSM 13258 11055600 YP_004789200.1 CDS Murru_2752 NC_015945.1 3029127 3029762 D KEGG: rbi:RB2501_04445 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3029127..3029762 Muricauda ruestringensis DSM 13258 11055601 YP_004789201.1 CDS Murru_2753 NC_015945.1 3029768 3031162 D KEGG: rbi:RB2501_04450 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3029768..3031162 Muricauda ruestringensis DSM 13258 11055602 YP_004789202.1 CDS Murru_2754 NC_015945.1 3031164 3031571 D KEGG: rbi:RB2501_04455 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3031164..3031571 Muricauda ruestringensis DSM 13258 11055603 YP_004789203.1 CDS Murru_2755 NC_015945.1 3031860 3032390 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR014284:IPR014327:IPR000792:IPR007627:IPR 013249; KEGG: gfo:GFO_1260 RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SMART: Transcription regulator LuxR, C-terminal; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 3031860..3032390 Muricauda ruestringensis DSM 13258 11055604 YP_004789204.1 CDS Murru_2756 NC_015945.1 3032416 3033084 R PFAM: NUDIX domain; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086; KEGG: syp:SYNPCC7002_A2383 NUDIX hydrolase family protein; PFAM: NUDIX hydrolase domain; SPTR: NUDIX hydrolase; NUDIX hydrolase complement(3032416..3033084) Muricauda ruestringensis DSM 13258 11055605 YP_004789205.1 CDS Murru_2757 NC_015945.1 3033214 3034068 D PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: has:Halsa_2366 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short-chain dehydrogenase/reductase SDR; 3-oxoacyl-ACP reductase 3033214..3034068 Muricauda ruestringensis DSM 13258 11055606 YP_004789206.1 CDS Murru_2758 NC_015945.1 3034105 3035289 D PFAM: D-mannonate dehydratase (UxuA); TIGRFAM: mannonate dehydratase; COGs: COG1312 D-mannonate dehydratase; HAMAP: Mannonate dehydratase; InterPro IPR004628; KEGG: dfe:Dfer_4123 mannonate dehydratase; PFAM: Mannonate dehydratase; PRIAM: Mannonate dehydratase; SPTR: D-mannonate dehydratase; TIGRFAM: Mannonate dehydratase; mannonate dehydratase 3034105..3035289 Muricauda ruestringensis DSM 13258 11055607 YP_004789207.1 CDS Murru_2759 NC_015945.1 3035289 3036716 D PFAM: Glucuronate isomerase; COGs: COG1904 Glucuronate isomerase; HAMAP: Uronate isomerase; InterPro IPR003766; KEGG: rbi:RB2501_03985 uronate isomerase; PFAM: Uronate isomerase; PRIAM: Glucuronate isomerase; SPTR: Uronate isomerase; uronate isomerase 3035289..3036716 Muricauda ruestringensis DSM 13258 11055608 YP_004789208.1 CDS Murru_2760 NC_015945.1 3036713 3037759 D PFAM: pfkB family carbohydrate kinase; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611; KEGG: rbi:RB2501_13619 putative kinase; PFAM: Carbohydrate/purine kinase; SPTR: Putative kinase; PfkB domain-containing protein 3036713..3037759 Muricauda ruestringensis DSM 13258 11055609 YP_004789209.1 CDS Murru_2761 NC_015945.1 3037824 3038498 D PFAM: KDPG and KHG aldolase; TIGRFAM: Entner-Doudoroff aldolase; COGs: COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; InterPro IPR000887; KEGG: fbc:FB2170_15053 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase; PFAM: KDPG/KHG aldolase; SPTR:Keto-hydroxyglutarate-aldolase/keto-deoxy-phos phogluconatealdolase; KDPG and KHG aldolase 3037824..3038498 Muricauda ruestringensis DSM 13258 11055610 YP_004789210.1 CDS Murru_2762 NC_015945.1 3038498 3039478 D PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR004682:IPR018389; KEGG: rbi:RB2501_03980 TRAP-type C4-dicarboxylate transport system, periplasmic component; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: TRAP-type C4-dicarboxylate transport system, periplasmic component; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; TRAP dicarboxylate transporter subunit DctP 3038498..3039478 Muricauda ruestringensis DSM 13258 11055611 YP_004789211.1 CDS Murru_2763 NC_015945.1 3039478 3039936 D PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: rbi:RB2501_03975 putative TRAP-type C4-dicarboxylate transport system, small permease component; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: Hypothetical TRAP-type C4-dicarboxylate transport system, small permease component; tripartite AtP-independent periplasmic transporter subunit DctQ 3039478..3039936 Muricauda ruestringensis DSM 13258 11055612 YP_004789212.1 CDS Murru_2764 NC_015945.1 3039942 3041237 D PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681:IPR010656; KEGG: rbi:RB2501_03970 hypothetical protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: Putative uncharacterized protein; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; TRAP dicarboxylate transporter subunit DctM 3039942..3041237 Muricauda ruestringensis DSM 13258 11055613 YP_004789213.1 CDS Murru_2765 NC_015945.1 3041278 3042642 D PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: fbc:FB2170_00670 hypothetical protein; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; hypothetical protein 3041278..3042642 Muricauda ruestringensis DSM 13258 11055614 YP_004789214.1 CDS Murru_2766 NC_015945.1 3042646 3043974 D PFAM: Oxidoreductase family, NAD-binding Rossmann fold; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: fbc:FB2170_00675 putative dehydrogenase-like protein; PFAM: Oxidoreductase, N-terminal; SPTR: Putative dehydrogenase-related protein; oxidoreductase domain-containing protein 3042646..3043974 Muricauda ruestringensis DSM 13258 11055615 YP_004789215.1 CDS Murru_2767 NC_015945.1 3043980 3045155 D PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: fbc:FB2170_00680 putative hydrogenase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Putative hydrogenase; oxidoreductase domain-containing protein 3043980..3045155 Muricauda ruestringensis DSM 13258 11055616 YP_004789216.1 CDS Murru_2768 NC_015945.1 3045603 3046208 R PFAM: MarR family; InterPro IPR000835; KEGG: fbc:FB2170_11026 transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator; regulatory protein MarR complement(3045603..3046208) Muricauda ruestringensis DSM 13258 11055617 YP_004789217.1 CDS Murru_2769 NC_015945.1 3046205 3046561 R PFAM: AIG2-like family; InterPro IPR009288; KEGG: ppg:PputGB1_5297 AIG2 family protein; PFAM: AIG2-like; SPTR: Putative uncharacterized protein; AIG2 family protein complement(3046205..3046561) Muricauda ruestringensis DSM 13258 11055618 YP_004789218.1 CDS Murru_2770 NC_015945.1 3046558 3046821 R PFAM: Domain of unknown function (DUF2024); InterPro IPR018592; KEGG: fjo:Fjoh_4140 hypothetical protein; PFAM: Protein of unknown function DUF2024; SPTR: Putative uncharacterized protein; hypothetical protein complement(3046558..3046821) Muricauda ruestringensis DSM 13258 11055619 YP_004789219.1 CDS Murru_2771 NC_015945.1 3046892 3047620 R KEGG: cpi:Cpin_5104 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3046892..3047620) Muricauda ruestringensis DSM 13258 11055620 YP_004789220.1 CDS Murru_2772 NC_015945.1 3047698 3047931 R KEGG: fbc:FB2170_11036 thioredoxin; SPTR: Thioredoxin; thioredoxin complement(3047698..3047931) Muricauda ruestringensis DSM 13258 11055621 YP_004789221.1 CDS Murru_2773 NC_015945.1 3048164 3049840 R PFAM: Sulfate transporter family; STAS domain; TIGRFAM: high affinity sulphate transporter 1; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR001902:IPR011547:IPR002645; KEGG: cch:Cag_1553 sulphate anion transporter; PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Sulphate anion transporter; TIGRFAM: Sulphate anion transporter; sulfate transporter complement(3048164..3049840) Muricauda ruestringensis DSM 13258 11055622 YP_004789222.1 CDS Murru_2775 NC_015945.1 3050965 3051732 R PFAM: NUDIX domain; COGs: COG1051 ADP-ribose pyrophosphatase; InterPro IPR000086; KEGG: sli:Slin_0652 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: Putative uncharacterized protein; NUDIX hydrolase complement(3050965..3051732) Muricauda ruestringensis DSM 13258 11055624 YP_004789223.1 CDS Murru_2776 NC_015945.1 3051821 3053449 D PFAM: Carboxylesterase; COGs: COG2272 Carboxylesterase type B; InterPro IPR002018; KEGG: rbi:RB2501_13134 putative esterase; PFAM: Carboxylesterase, type B; SPTR: Putative esterase; carboxylesterase type B 3051821..3053449 Muricauda ruestringensis DSM 13258 11055625 YP_004789224.1 CDS Murru_2777 NC_015945.1 3053593 3053820 R COGs: COG3655 transcriptional regulator protein; InterPro IPR001387; KEGG: cpi:Cpin_5711 transcriptional regulator, XRE family; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; XRE family transcriptional regulator complement(3053593..3053820) Muricauda ruestringensis DSM 13258 11055626 YP_004789225.1 CDS Murru_2778 NC_015945.1 3053824 3054312 R PFAM: Protein of unknown function (DUF3036); KEGG: gmc:GY4MC1_3559 protein of unknown function DUF3036; SPTR: Putative uncharacterized protein; hypothetical protein complement(3053824..3054312) Muricauda ruestringensis DSM 13258 11055627 YP_004789226.1 CDS Murru_2779 NC_015945.1 3054615 3054800 D hypothetical protein 3054615..3054800 Muricauda ruestringensis DSM 13258 11055628 YP_004789227.1 CDS Murru_2781 NC_015945.1 3055412 3055504 D hypothetical protein 3055412..3055504 Muricauda ruestringensis DSM 13258 11055630 YP_004789228.1 CDS Murru_2782 NC_015945.1 3055501 3056097 R PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: ppn:Palpr_0445 transcriptional regulator, crp/fnr family; PFAM: Cyclic nucleotide-binding domain; SPTR: Putative transcriptional regulator, Crp/Fnr family; putative Crp/Fnr family transcriptional regulator complement(3055501..3056097) Muricauda ruestringensis DSM 13258 11055631 YP_004789229.1 CDS Murru_2783 NC_015945.1 3056807 3062569 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase); InterProIPR000014:IPR001610:IPR003018:IPR003661:IPR 003594:IPR013655:IPR013767:IPR013656; KEGG: mtt:Ftrac_0408 pas/pac sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; PAS fold-3; PAS fold; GAF; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAC motif; PAS; GAF; SPTR: Sensory transduction histidine kinase; TIGRFAM: PAS; multi-sensor signal transduction histidine kinase 3056807..3062569 Muricauda ruestringensis DSM 13258 11055632 YP_004789230.1 CDS Murru_2784 NC_015945.1 3062566 3062991 D PFAM: Response regulator receiver domain; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR001789; KEGG: mtt:Ftrac_0406 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Response regulator; response regulator receiver protein 3062566..3062991 Muricauda ruestringensis DSM 13258 11055633 YP_004789231.1 CDS Murru_2785 NC_015945.1 3063010 3064056 D PFAM: Response regulator receiver domain; TIGRFAM: PAS domain S-box; COGs: COG0784 FOG: CheY-like receiver; InterPro IPR000014:IPR001789; KEGG: mtt:Ftrac_2272 pas/pac sensor protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; PAS; SPTR: PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS; putative PAS/PAC sensor protein 3063010..3064056 Muricauda ruestringensis DSM 13258 11055634 YP_004789232.1 CDS Murru_2786 NC_015945.1 3064028 3064414 D PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: mtt:Ftrac_2399 response regulator receiver; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Response regulator receiver protein; response regulator receiver protein 3064028..3064414 Muricauda ruestringensis DSM 13258 11055635 YP_004789233.1 CDS Murru_2787 NC_015945.1 3064531 3066027 R PFAM: 7TM diverse intracellular signalling; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: phe:Phep_1714 ATP-binding region ATPase domain protein; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Membrane protein, putative; integral membrane sensor signal transduction histidine kinase complement(3064531..3066027) Muricauda ruestringensis DSM 13258 11055636 YP_004789234.1 CDS Murru_2788 NC_015945.1 3066481 3067668 D PFAM: GAF domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594:IPR003018; KEGG: dfe:Dfer_1089 GAF sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; GAF; SMART: ATPase-like, ATP-binding domain; SPTR: Putative histidine kinase response regulator hybrid protein; GAF sensor signal transduction histidine kinase 3066481..3067668 Muricauda ruestringensis DSM 13258 11055637 YP_004789235.1 CDS Murru_2789 NC_015945.1 3068153 3068734 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR014327:IPR007627:IPR013249; KEGG: bfs:BF1197 putative ECF-type RNA polymerase sigma factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: Putative RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 3068153..3068734 Muricauda ruestringensis DSM 13258 11055638 YP_004789236.1 CDS Murru_2790 NC_015945.1 3068804 3069748 D PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: bfs:BF3641 putative transmembrane sensor/regulatory protein; PFAM: FecR protein; SPTR: Putative uncharacterized protein; anti-FecI sigma factor FecR 3068804..3069748 Muricauda ruestringensis DSM 13258 11055639 YP_004789237.1 CDS Murru_2791 NC_015945.1 3069844 3073266 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR011662:IPR012910:IPR000531; KEGG: pdi:BDI_1624 hypothetical protein; PFAM: TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent receptor, beta-barrel; SMART: Secretin/TonB, short N-terminal; SPTR: Outer membrane protein; TonB-dependent receptor plug 3069844..3073266 Muricauda ruestringensis DSM 13258 11055640 YP_004789238.1 CDS Murru_2792 NC_015945.1 3073284 3074858 D PFAM: SusD family; InterPro IPR012944; KEGG: pdi:BDI_1622 hypothetical protein; PFAM: RagB/SusD; SPTR: RagB/SusD domain protein; RagB/SusD domain-containing protein 3073284..3074858 Muricauda ruestringensis DSM 13258 11055641 YP_004789239.1 CDS Murru_2793 NC_015945.1 3075027 3076751 D PFAM: GMC oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR003953; KEGG: rbi:RB2501_09520 GMC oxidoreductase family protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; SPTR: GMC oxidoreductase family protein; manually curated; fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein 3075027..3076751 Muricauda ruestringensis DSM 13258 11055642 YP_004789240.1 CDS Murru_2794 NC_015945.1 3076756 3077466 D KEGG: rbi:RB2501_09525 Tat (twin-arginine translocation) pathway signal sequence domain-containing protein; SPTR: Tat (Twin-arginine translocation) pathway signal sequence domain protein; Tat (twin-arginine translocation) pathway signal sequence domain-containing protein 3076756..3077466 Muricauda ruestringensis DSM 13258 11055643 YP_004789241.1 CDS Murru_2795 NC_015945.1 3077666 3080422 D InterPro IPR000792:IPR013249; KEGG: rbi:RB2501_07285 hypothetical protein; PFAM: RNA polymerase sigma factor 70, region 4 type 2; SMART: Transcription regulator LuxR, C-terminal; SPTR: Putative uncharacterized protein; sigma-70 region 4 type 2 3077666..3080422 Muricauda ruestringensis DSM 13258 11055644 YP_004789242.1 CDS Murru_2796 NC_015945.1 3080656 3083706 D PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: rbi:RB2501_07290 putative TonB-linked outer membrane protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative TonB-linked outer membrane protein; TonB-dependent receptor plug 3080656..3083706 Muricauda ruestringensis DSM 13258 11055645 YP_004789243.1 CDS Murru_2797 NC_015945.1 3083720 3085270 D PFAM: SusD family; InterPro IPR012944; KEGG: rbi:RB2501_07295 hypothetical protein; PFAM: RagB/SusD; SPTR: Putative outer membrane protein probably involved in nutrient binding; RagB/SusD domain-containing protein 3083720..3085270 Muricauda ruestringensis DSM 13258 11055646 YP_004789244.1 CDS Murru_2798 NC_015945.1 3085295 3087667 D KEGG: rbi:RB2501_07300 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3085295..3087667 Muricauda ruestringensis DSM 13258 11055647 YP_004789245.1 CDS Murru_2799 NC_015945.1 3087722 3089098 D PFAM: Uncharacterized protein conserved in bacteria (DUF2329); COGs: COG5368 conserved hypothetical protein; InterPro IPR019282; KEGG: rbi:RB2501_07305 hypothetical protein; PFAM: Protein of unknown function DUF2329; SPTR: Putative uncharacterized protein; hypothetical protein 3087722..3089098 Muricauda ruestringensis DSM 13258 11055648 YP_004789246.1 CDS Murru_2800 NC_015945.1 3089091 3090470 D PFAM: Uncharacterized protein conserved in bacteria (DUF2329); COGs: COG5368 conserved hypothetical protein; InterPro IPR019282; KEGG: rbi:RB2501_07310 hypothetical protein; PFAM: Protein of unknown function DUF2329; SPTR: Putative uncharacterized protein; hypothetical protein 3089091..3090470 Muricauda ruestringensis DSM 13258 11055649 YP_004789247.1 CDS Murru_2801 NC_015945.1 3090472 3091278 D PFAM: Phospholipase/Carboxylesterase; COGs: COG4099 peptidase; InterPro IPR003140; KEGG: rbi:RB2501_07315 hypothetical protein; PFAM: Phospholipase/carboxylesterase; SPTR: Putative uncharacterized protein; phospholipase/carboxylesterase 3090472..3091278 Muricauda ruestringensis DSM 13258 11055650 YP_004789248.1 CDS Murru_2802 NC_015945.1 3091305 3093572 D PFAM: Glycosyl hydrolase family 3 C terminal domain; Glycosyl hydrolase family 3 N terminal domain; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764:IPR002772; KEGG: gfo:GFO_0367 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal; PRIAM: Beta-glucosidase; SPTR: Glycoside hydrolase, family 3-likely beta-glucosidase; beta-glucosidase 3091305..3093572 Muricauda ruestringensis DSM 13258 11055651 YP_004789249.1 CDS Murru_2803 NC_015945.1 3093580 3095208 D PFAM: Sulfatase; COGs: COG3119 Arylsulfatase A; InterPro IPR000917; KEGG: zpr:ZPR_3504 sulfatase; PFAM: Sulfatase; SPTR: Sulfatase; sulfatase 3093580..3095208 Muricauda ruestringensis DSM 13258 11055652 YP_004789250.1 CDS Murru_2804 NC_015945.1 3095249 3096175 D PFAM: Integral membrane protein TerC family; TIGRFAM: integral membrane protein, TerC family; COGs: COG0861 Membrane protein TerC possibly involved in tellurium resistance; InterPro IPR005496; KEGG: fjo:Fjoh_2343 integral membrane protein TerC; PFAM: Integral membrane protein TerC; SPTR: Integral membrane protein TerC; integral membrane protein TerC 3095249..3096175 Muricauda ruestringensis DSM 13258 11055653 YP_004789251.1 CDS Murru_2805 NC_015945.1 3096205 3096303 D hypothetical protein 3096205..3096303 Muricauda ruestringensis DSM 13258 11055654 YP_004789252.1 CDS Murru_2806 NC_015945.1 3096345 3098504 R PFAM: TonB-dependent Receptor Plug Domain; COGs: COG4771 Outer membrane receptor for ferrienterochelin and colicins; InterPro IPR012910:IPR000531; KEGG: rbi:RB2501_01086 putative TonB-dependent outer membrane receptor protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative TonB-dependent outer membrane receptor protein; TonB-dependent receptor plug complement(3096345..3098504) Muricauda ruestringensis DSM 13258 11055655 YP_004789253.1 CDS Murru_2807 NC_015945.1 3099014 3099589 R PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: dfe:Dfer_0358 putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; SPTR: Cyclic nucleotide binding-regulatory protein; putative Crp/Fnr family transcriptional regulator complement(3099014..3099589) Muricauda ruestringensis DSM 13258 11055656 YP_004789254.1 CDS Murru_2808 NC_015945.1 3099837 3100844 D PFAM: Aldo/keto reductase family; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR023210; KEGG: phe:Phep_2077 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain; SPTR: Aldo/keto reductase; NADP-dependent oxidoreductase domain-containing protein 3099837..3100844 Muricauda ruestringensis DSM 13258 11055657 YP_004789255.1 CDS Murru_2809 NC_015945.1 3100938 3101681 D PFAM: NIPSNAP; InterPro IPR012577; KEGG: rbi:RB2501_11937 hypothetical protein; PFAM: NIPSNAP; SPTR: Putative uncharacterized protein; NIPSNAP family containing protein 3100938..3101681 Muricauda ruestringensis DSM 13258 11055658 YP_004789256.1 CDS Murru_2810 NC_015945.1 3101909 3102289 R PFAM: Bacterial-like globin; COGs: COG2346 Truncated hemoglobins; KEGG: mtt:Ftrac_2727 globin family protein; SPTR: Bacterial-like globin family protein; globin family protein complement(3101909..3102289) Muricauda ruestringensis DSM 13258 11055659 YP_004789257.1 CDS Murru_2811 NC_015945.1 3102309 3102656 R KEGG: fjo:Fjoh_1582 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3102309..3102656) Muricauda ruestringensis DSM 13258 11055660 YP_004789258.1 CDS Murru_2812 NC_015945.1 3102732 3103460 R PFAM: Domain of Unknown function (DUF542); Hemerythrin HHE cation binding domain; TIGRFAM: iron-sulfur cluster repair di-iron protein; COGs: COG2846 Regulator of cell morphogenesis and NO signaling; InterPro IPR019903:IPR007500:IPR012312; KEGG: gfo:GFO_1401 nitric oxide-dependent regulator; PFAM: Domain of unknown function DUF542, ScdA N-terminal; Haemerythrin/HHE cation-binding motif; SPTR: Nitric oxide-dependent regulator; TIGRFAM: Iron-sulfur cluster repair di-iron protein; iron-sulfur cluster repair di-iron protein complement(3102732..3103460) Muricauda ruestringensis DSM 13258 11055661 YP_004789259.1 CDS Murru_2813 NC_015945.1 3103525 3103959 R PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: gfo:GFO_1399 Rrf2-like transcriptional regulator protein; PFAM: Transcription regulator Rrf2; SPTR: Rrf2-like transcriptional regulator protein; TIGRFAM: Transcription regulator Rrf2; BadM/Rrf2 family transcriptional regulator complement(3103525..3103959) Muricauda ruestringensis DSM 13258 11055662 YP_004789260.1 CDS Murru_2814 NC_015945.1 3104103 3105305 R KEGG: fbc:FB2170_03765 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3104103..3105305) Muricauda ruestringensis DSM 13258 11055663 YP_004789261.1 CDS Murru_2815 NC_015945.1 3105335 3106117 R KEGG: fbc:FB2170_03770 hypothetical protein; SPTR: Hypothetical nitrous oxide metabolic protein; hypothetical protein complement(3105335..3106117) Muricauda ruestringensis DSM 13258 11055664 YP_004789262.1 CDS Murru_2816 NC_015945.1 3106110 3106823 R PFAM: ABC transporter; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_03775 putative ABC transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative ABC transporter; ABC transporter-like protein complement(3106110..3106823) Muricauda ruestringensis DSM 13258 11055665 YP_004789263.1 CDS Murru_2817 NC_015945.1 3106820 3108088 R PFAM: Periplasmic copper-binding protein (NosD); TIGRFAM: parallel beta-helix repeat (two copies); COGs: COG3420 Nitrous oxidase accessory protein; InterPro IPR006633:IPR006626:IPR007742; KEGG: fbc:FB2170_03780 NosD; PFAM: Periplasmic copper-binding; SMART: Carbohydrate-binding/sugar hydrolysis domain; Parallel beta-helix repeat; SPTR: NosD; copper-binding protein complement(3106820..3108088) Muricauda ruestringensis DSM 13258 11055666 YP_004789264.1 CDS Murru_2818 NC_015945.1 3108174 3108641 R COGs: COG3467 flavin-nucleotide-binding protein; KEGG: rbi:RB2501_13054 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3108174..3108641) Muricauda ruestringensis DSM 13258 11055667 YP_004789265.1 CDS Murru_2819 NC_015945.1 3108644 3109078 R PFAM: NosL; KEGG: fbc:FB2170_03790 hypothetical protein; SPTR: Hypothetical lipoprotein; hypothetical protein complement(3108644..3109078) Muricauda ruestringensis DSM 13258 11055668 YP_004789266.1 CDS Murru_2820 NC_015945.1 3109081 3109701 R InterPro IPR019931; KEGG: rbi:RB2501_05460 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: LPXTG-motif cell wall anchor; LPXTG-motif cell wall anchor domain-containing protein complement(3109081..3109701) Muricauda ruestringensis DSM 13258 11055669 YP_004789267.1 CDS Murru_2821 NC_015945.1 3109826 3111778 R PFAM: Cytochrome C oxidase subunit II, periplasmic domain; COGs: COG4263 Nitrous oxide reductase; InterPro IPR002429; KEGG: rbi:RB2501_05465 nitrous oxide reductase; PFAM: Cytochrome c oxidase subunit II C-terminal; PRIAM: Nitrous-oxide reductase; SPTR: Nitrous oxide reductase; nitrous-oxide reductase complement(3109826..3111778) Muricauda ruestringensis DSM 13258 11055670 YP_004789268.1 CDS Murru_2822 NC_015945.1 3111804 3112385 R PFAM: Fasciclin domain; COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: fbc:FB2170_03805 hypothetical protein; PFAM: FAS1 domain; SMART: FAS1 domain; SPTR: Putative uncharacterized protein; beta-Ig-H3/fasciclin complement(3111804..3112385) Muricauda ruestringensis DSM 13258 11055671 YP_004789269.1 CDS Murru_2823 NC_015945.1 3112391 3112903 R PFAM: Cytochrome c; InterPro IPR003088; KEGG: fbc:FB2170_03810 cytochrome c, class I; PFAM: Cytochrome c, class I; SPTR: Cytochrome c, class I; cytochrome c class I complement(3112391..3112903) Muricauda ruestringensis DSM 13258 11055672 YP_004789270.1 CDS Murru_2824 NC_015945.1 3113020 3113451 D PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: rbi:RB2501_05485 hypothetical protein; PFAM: Transcription regulator Rrf2; SPTR: Putative uncharacterized protein; TIGRFAM: Transcription regulator Rrf2; BadM/Rrf2 family transcriptional regulator 3113020..3113451 Muricauda ruestringensis DSM 13258 11055673 YP_004789271.1 CDS Murru_2825 NC_015945.1 3113469 3114056 R COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; HAMAP: Molybdopterin-guanine dinucleotide biosynthesis protein A; InterPro IPR013482; KEGG: fjo:Fjoh_4642 molybdopterin-guanine dinucleotide biosynthesis protein A-like protein; SPTR: Probable molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein MobA complement(3113469..3114056) Muricauda ruestringensis DSM 13258 11055674 YP_004789272.1 CDS Murru_2826 NC_015945.1 3114050 3114427 R KEGG: rbi:RB2501_01196 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3114050..3114427) Muricauda ruestringensis DSM 13258 11055675 YP_004789273.1 CDS Murru_2827 NC_015945.1 3114623 3116239 D PFAM: Carboxylesterase; COGs: COG2272 Carboxylesterase type B; InterPro IPR002018; KEGG: sli:Slin_4145 carboxylesterase; PFAM: Carboxylesterase, type B; SPTR: Carboxylesterase; carboxylesterase type B 3114623..3116239 Muricauda ruestringensis DSM 13258 11055676 YP_004789274.1 CDS Murru_2828 NC_015945.1 3116384 3117427 R PFAM: Luciferase-like monooxygenase; TIGRFAM: luciferase family oxidoreductase, group 1; COGs: COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase; InterPro IPR019949:IPR016048; KEGG: zpr:ZPR_1059 luciferase-like monooxygenase; PFAM: Luciferase-like, subgroup; SPTR: Putative uncharacterized protein; TIGRFAM: Luciferase family oxidoreductase, group 1; luciferase family oxidoreductase complement(3116384..3117427) Muricauda ruestringensis DSM 13258 11055677 YP_004789275.1 CDS Murru_2829 NC_015945.1 3117464 3117733 R PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: zpr:ZPR_1058 regulatory protein, ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Regulatory protein, ArsR; regulatory protein ArsR complement(3117464..3117733) Muricauda ruestringensis DSM 13258 11055678 YP_004789276.1 CDS Murru_2830 NC_015945.1 3117925 3119322 R PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: lby:Lbys_0609 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein; oxidoreductase domain-containing protein complement(3117925..3119322) Muricauda ruestringensis DSM 13258 11055679 YP_004789277.1 CDS Murru_2831 NC_015945.1 3119347 3120705 R PFAM: WD40-like Beta Propeller Repeat; COGs: COG0823 Periplasmic component of the Tol biopolymer transport system; InterPro IPR011659; KEGG: fbc:FB2170_00745 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3119347..3120705) Muricauda ruestringensis DSM 13258 11055680 YP_004789278.1 CDS Murru_2832 NC_015945.1 3120761 3121462 R PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: gfo:GFO_1948 GDSL-like lipase/acylhydrolase; PFAM: Lipase, GDSL; PRIAM: Arylesterase; SPTR: GDSL-like lipase/acylhydrolase; arylesterase complement(3120761..3121462) Muricauda ruestringensis DSM 13258 11055681 YP_004789279.1 CDS Murru_2833 NC_015945.1 3121506 3122183 D PFAM: ABC transporter; COGs: COG4181 ABC-type transport system involved in lysophospholipase L1 biosynthesis ATPase component; InterPro IPR003593:IPR003439; KEGG: gfo:GFO_1949 ABC-type transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC-type transporter ATP-binding protein; phosphonate-transporting ATPase 3121506..3122183 Muricauda ruestringensis DSM 13258 11055682 YP_004789280.1 CDS Murru_2834 NC_015945.1 3122185 3124722 D PFAM: Predicted permease; COGs: COG3127 ABC-type transport system involved in lysophospholipase L1 biosynthesis permease component; InterPro IPR003838; KEGG: gfo:GFO_1950 FtsX family membrane protein; PFAM: Domain of unknown function DUF214, ABC transporter permease; SPTR: FtsX family membrane protein (Predicted permease); hypothetical protein 3122185..3124722 Muricauda ruestringensis DSM 13258 11055683 YP_004789281.1 CDS Murru_2835 NC_015945.1 3125029 3126483 D PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: rbi:RB2501_06065 putative outer membrane protein; PFAM: Outer membrane efflux protein; SPTR: Probable outer membrane protein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein 3125029..3126483 Muricauda ruestringensis DSM 13258 11055684 YP_004789282.1 CDS Murru_2836 NC_015945.1 3126473 3127681 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: rbi:RB2501_06070 putative RND efflux membrane fusion protein; PFAM: Secretion protein HlyD; SPTR: Probable RND efflux membrane fusion protein; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit 3126473..3127681 Muricauda ruestringensis DSM 13258 11055685 YP_004789283.1 CDS Murru_2837 NC_015945.1 3127690 3130836 D PFAM: AcrB/AcrD/AcrF family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: rbi:RB2501_06075 putative multidrug resistance protein; PFAM: Acriflavin resistance protein; SPTR: Probable multidrug resistance protein; acriflavin resistance protein 3127690..3130836 Muricauda ruestringensis DSM 13258 11055686 YP_004789284.1 CDS Murru_2838 NC_015945.1 3130922 3131764 D PFAM: ATP cone domain; Restriction endonuclease; KEGG: fbc:FB2170_14453 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3130922..3131764 Muricauda ruestringensis DSM 13258 11055687 YP_004789285.1 CDS Murru_2839 NC_015945.1 3131771 3133141 D PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; Beta-Casp domain; COGs: COG1236 exonuclease of the beta-lactamase fold involved in RNA processing; InterPro IPR001279:IPR011108; KEGG: fbc:FB2170_14448 hypothetical protein; PFAM: Beta-lactamase-like; RNA-metabolising metallo-beta-lactamase; SMART: Beta-lactamase-like; SPTR: Putative uncharacterized protein; beta-lactamase domain-containing protein 3131771..3133141 Muricauda ruestringensis DSM 13258 11055688 YP_004789286.1 CDS Murru_2840 NC_015945.1 3133149 3133802 R PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase; COGs: COG0035 Uracil phosphoribosyltransferase; InterPro IPR000836; KEGG: fbc:FB2170_14863 uracil phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Uracil phosphoribosyltransferase; phosphoribosyltransferase complement(3133149..3133802) Muricauda ruestringensis DSM 13258 11055689 YP_004789287.1 CDS Murru_2841 NC_015945.1 3133979 3134893 D PFAM: DnaJ C terminal region; DnaJ domain; COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR001623:IPR002939; KEGG: rbi:RB2501_11867 putative chaperone; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Putative chaperone; chaperone DnaJ domain-containing protein 3133979..3134893 Muricauda ruestringensis DSM 13258 11055690 YP_004789288.1 CDS Murru_2842 NC_015945.1 3134900 3135190 D KEGG: fjo:Fjoh_2373 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3134900..3135190 Muricauda ruestringensis DSM 13258 11055691 YP_004789289.1 CDS Murru_2843 NC_015945.1 3135331 3136152 D PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: fbc:FB2170_14553 universal stress protein; PFAM: UspA; SPTR: Universal stress protein; UspA domain-containing protein 3135331..3136152 Muricauda ruestringensis DSM 13258 11055692 YP_004789290.1 CDS Murru_2844 NC_015945.1 3136153 3136560 R KEGG: fbc:FB2170_14548 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3136153..3136560) Muricauda ruestringensis DSM 13258 11055693 YP_004789291.1 CDS Murru_2845 NC_015945.1 3136680 3138176 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2205 Osmosensitive K+ channel histidine kinase; InterProIPR000014:IPR001610:IPR003661:IPR003594:IPR 013767; KEGG: zpr:ZPR_2014 sensory transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; PAC motif; SPTR: Sensor histidine kinase; TIGRFAM: PAS; PAS/PAC sensor signal transduction histidine kinase 3136680..3138176 Muricauda ruestringensis DSM 13258 11055694 YP_004789292.1 CDS Murru_2846 NC_015945.1 3138154 3139203 D PFAM: Response regulator receiver domain; Cyclic nucleotide-binding domain; COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR001789:IPR000595:IPR001808; KEGG: zpr:ZPR_2015 putative diguanylate phosphodiesterase (EAL domain) with response regulator receiver modulation; PFAM: Signal transduction response regulator, receiver domain; Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: Signal transduction response regulator, receiver domain; Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SPTR: Putative diguanylate phosphodiesterase (EAL domain) with Response Regulator Receiver modulation; response regulator receiver protein 3138154..3139203 Muricauda ruestringensis DSM 13258 11055695 YP_004789293.1 CDS Murru_2847 NC_015945.1 3139291 3140127 D PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: fbc:FB2170_14488 hypothetical protein; PFAM: UspA; SPTR: Universal stress protein; UspA domain-containing protein 3139291..3140127 Muricauda ruestringensis DSM 13258 11055696 YP_004789294.1 CDS Murru_2848 NC_015945.1 3140282 3141124 D PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: fbc:FB2170_14468 putative universal stress protein UspA; PFAM: UspA; SPTR: Putative universal stress protein UspA; UspA domain-containing protein 3140282..3141124 Muricauda ruestringensis DSM 13258 11055697 YP_004789295.1 CDS Murru_2849 NC_015945.1 3141134 3141943 D PFAM: Universal stress protein family; InterPro IPR006016; KEGG: fbc:FB2170_14463 putative universal stress protein UspA; PFAM: UspA; SPTR: Universal stress protein; UspA domain-containing protein 3141134..3141943 Muricauda ruestringensis DSM 13258 11055698 YP_004789296.1 CDS Murru_2850 NC_015945.1 3142002 3142853 D PFAM: Universal stress protein family; InterPro IPR006016; KEGG: fbc:FB2170_14488 hypothetical protein; PFAM: UspA; SPTR: Universal stress protein; UspA domain-containing protein 3142002..3142853 Muricauda ruestringensis DSM 13258 11055699 YP_004789297.1 CDS Murru_2851 NC_015945.1 3142867 3143295 D KEGG: fbc:FB2170_14458 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3142867..3143295 Muricauda ruestringensis DSM 13258 11055700 YP_004789298.1 CDS Murru_2852 NC_015945.1 3143380 3143784 D KEGG: fbc:FB2170_14443 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3143380..3143784 Muricauda ruestringensis DSM 13258 11055701 YP_004789299.1 CDS Murru_2853 NC_015945.1 3143862 3144302 D PFAM: Hsp20/alpha crystallin family; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: fbc:FB2170_00355 small heat shock protein; PFAM: Heat shock protein Hsp20; SPTR: Small heat shock protein; heat shock protein Hsp20 3143862..3144302 Muricauda ruestringensis DSM 13258 11055702 YP_004789300.1 CDS Murru_2854 NC_015945.1 3144354 3144797 D KEGG: fbc:FB2170_14433 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3144354..3144797 Muricauda ruestringensis DSM 13258 11055703 YP_004789301.1 CDS Murru_2855 NC_015945.1 3144819 3145826 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: fbc:FB2170_14423 D-lactate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; PRIAM: D-lactate dehydrogenase; SPTR: D-lactate dehydrogenase; D-lactate dehydrogenase 3144819..3145826 Muricauda ruestringensis DSM 13258 11055704 YP_004789302.1 CDS Murru_2856 NC_015945.1 3145821 3147254 R PFAM: Phospholipase D Active site motif; COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: fbc:FB2170_14418 cardiolipin synthetase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; SPTR: Cardiolipin synthetase; phospholipase D complement(3145821..3147254) Muricauda ruestringensis DSM 13258 11055705 YP_004789303.1 CDS Murru_2857 NC_015945.1 3147626 3149266 D PFAM: Putative modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR006311:IPR002510; KEGG: gfo:GFO_1941 DNA gyrase modulator family protein; PFAM: Peptidase U62, modulator of DNA gyrase; SPTR: DNA gyrase modulator family protein; peptidase U62 modulator of DNA gyrase 3147626..3149266 Muricauda ruestringensis DSM 13258 11055706 YP_004789304.1 CDS Murru_2858 NC_015945.1 3149294 3150610 D PFAM: Putative modulator of DNA gyrase; COGs: COG0312 Zn-dependent protease and their inactivated homologs; InterPro IPR002510; KEGG: rbi:RB2501_09465 TldD/PmbA family protein; PFAM: Peptidase U62, modulator of DNA gyrase; SPTR: TldD/PmbA family protein; peptidase U62 modulator of DNA gyrase 3149294..3150610 Muricauda ruestringensis DSM 13258 11055707 YP_004789305.1 CDS Murru_2859 NC_015945.1 3150697 3151323 D KEGG: rbi:RB2501_09470 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3150697..3151323 Muricauda ruestringensis DSM 13258 11055708 YP_004789306.1 CDS Murru_2860 NC_015945.1 3151334 3152338 D PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG0714 MoxR-like ATPase; InterPro IPR011703; KEGG: rbi:RB2501_09475 MoxR protein; PFAM: ATPase, AAA-3; SPTR: MoxR protein; ATPase 3151334..3152338 Muricauda ruestringensis DSM 13258 11055709 YP_004789307.1 CDS Murru_2861 NC_015945.1 3152338 3153237 D PFAM: Protein of unknown function DUF58; COGs: COG1721 conserved hypothetical protein (some members contain a von Willebrand factor type A (vWA) domain); InterPro IPR002881; KEGG: rbi:RB2501_09480 hypothetical protein; PFAM: Domain of unknown function DUF58; SPTR: Putative uncharacterized protein; hypothetical protein 3152338..3153237 Muricauda ruestringensis DSM 13258 11055710 YP_004789308.1 CDS Murru_2862 NC_015945.1 3153238 3154509 D PFAM: Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain; InterPro IPR011933; KEGG: rbi:RB2501_09485 hypothetical protein; PFAM: Double transmembrane domain; SPTR: Putative uncharacterized protein; TIGRFAM: Double transmembrane domain; double-transmembrane region domain-containing protein 3153238..3154509 Muricauda ruestringensis DSM 13258 11055711 YP_004789309.1 CDS Murru_2863 NC_015945.1 3154509 3156749 D KEGG: rbi:RB2501_09490 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3154509..3156749 Muricauda ruestringensis DSM 13258 11055712 YP_004789310.1 CDS Murru_2864 NC_015945.1 3156742 3158505 D KEGG: gfo:GFO_1934 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3156742..3158505 Muricauda ruestringensis DSM 13258 11055713 YP_004789311.1 CDS Murru_2865 NC_015945.1 3158553 3159434 R PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: cat:CA2559_09106 cobalt-zinc-cadmium resistance protein CzcD; PFAM: Cation efflux protein; SPTR: Cobalt-zinc-cadmium resistance protein czcD; TIGRFAM: Cation efflux protein; cation diffusion facilitator family transporter complement(3158553..3159434) Muricauda ruestringensis DSM 13258 11055714 YP_004789312.1 CDS Murru_2866 NC_015945.1 3159564 3162284 R PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosphate dikinase; COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterPro IPR010121:IPR002192:IPR008279:IPR000121; KEGG: rbi:RB2501_13514 pyruvate phosphate dikinase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme; PRIAM: Pyruvate, phosphate dikinase; SPTR: Pyruvate phosphate dikinase; TIGRFAM: Pyruvate, phosphate dikinase; pyruvate, phosphate dikinase complement(3159564..3162284) Muricauda ruestringensis DSM 13258 11055715 YP_004789313.1 CDS Murru_2867 NC_015945.1 3162626 3163228 D PFAM: YceI-like domain; InterPro IPR007372; KEGG: rbi:RB2501_13519 tRNA modification GTPase; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like; SPTR: tRNA modification GTPase; hypothetical protein 3162626..3163228 Muricauda ruestringensis DSM 13258 11055716 YP_004789314.1 CDS Murru_2868 NC_015945.1 3163264 3164526 D KEGG: rbi:RB2501_13524 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3163264..3164526 Muricauda ruestringensis DSM 13258 11055717 YP_004789315.1 CDS Murru_2869 NC_015945.1 3164605 3165204 D PFAM: YceI-like domain; InterPro IPR007372; KEGG: rbi:RB2501_13529 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SPTR: Putative uncharacterized protein; hypothetical protein 3164605..3165204 Muricauda ruestringensis DSM 13258 11055718 YP_004789316.1 CDS Murru_2870 NC_015945.1 3165346 3166212 D PFAM: Xylose isomerase-like TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307; KEGG: rbi:RB2501_13039 sugar phosphate isomerase/epimerase; PFAM: Xylose isomerase, TIM barrel domain; SPTR: Sugar phosphate isomerase/epimerase; xylose isomerase domain-containing protein 3165346..3166212 Muricauda ruestringensis DSM 13258 11055719 YP_004789317.1 CDS Murru_2871 NC_015945.1 3166989 3167987 R PFAM: Aldo/keto reductase family; COGs: COG0667 oxidoreductase (related to aryl-alcohol dehydrogenase); InterPro IPR023210; KEGG: pcu:pc0543 MocA family oxidoreductase; PFAM: NADP-dependent oxidoreductase domain; PRIAM: Aryl-alcohol dehydrogenase (NADP(+)); SPTR: Aldo/keto family dehydrogenase; aryl-alcohol dehydrogenase complement(3166989..3167987) Muricauda ruestringensis DSM 13258 11055721 YP_004789318.1 CDS Murru_2872 NC_015945.1 3168011 3169246 R PFAM: Major Facilitator Superfamily; TIGRFAM: Multidrug resistance protein; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: btk:BT9727_4773 major facilitator transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator family transporter; major facilitator superfamily protein complement(3168011..3169246) Muricauda ruestringensis DSM 13258 11055722 YP_004789319.1 CDS Murru_2873 NC_015945.1 3169281 3169856 R PFAM: Cyclic nucleotide-binding domain; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595; KEGG: cpi:Cpin_5404 putative transcriptional regulator, Crp/Fnr family; PFAM: Cyclic nucleotide-binding domain; SPTR: Putative transcriptional regulator, Crp/Fnr family; putative Crp/Fnr family transcriptional regulator complement(3169281..3169856) Muricauda ruestringensis DSM 13258 11055723 YP_004789320.1 CDS Murru_2874 NC_015945.1 3170131 3171207 R COGs: COG2267 Lysophospholipase; KEGG: rpc:RPC_2739 alpha/beta hydrolase fold; SPTR: Alpha/beta hydrolase fold; alpha/beta hydrolase fold protein complement(3170131..3171207) Muricauda ruestringensis DSM 13258 11055724 YP_004789321.1 CDS Murru_2875 NC_015945.1 3171420 3171896 D PFAM: 2Fe-2S iron-sulfur cluster binding domain; [2Fe-2S] binding domain; COGs: COG2080 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS/CutS homologs; InterPro IPR001041:IPR002888; KEGG: rbi:RB2501_01016 isoquinoline 1-oxidoreductase subunit alpha; PFAM: [2Fe-2S]-binding; Ferredoxin; PRIAM: Isoquinoline 1-oxidoreductase; SPTR: (2Fe-2S)-binding protein; Isoquinoline 1-oxidoreductase 3171420..3171896 Muricauda ruestringensis DSM 13258 11055725 YP_004789322.1 CDS Murru_2876 NC_015945.1 3171998 3174151 D PFAM: Molybdopterin-binding domain of aldehyde dehydrogenase; Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain; COGs: COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL/CutL homologs; InterPro IPR006311:IPR000674:IPR008274; KEGG: dfe:Dfer_0019 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; PFAM: Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead; Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; PRIAM: Aldehyde dehydrogenase (pyrroloquinoline-quinone); SPTR: Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde dehydrogenase (pyrroloquinoline-quinone) 3171998..3174151 Muricauda ruestringensis DSM 13258 11055726 YP_004789323.1 CDS Murru_2877 NC_015945.1 3174414 3175424 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG4753 Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; InterPro IPR018060:IPR000005; KEGG: fjo:Fjoh_0538 helix-turn-helix domain-containing protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: AraC-type DNA-binding domain-containing protein-like protein; AraC family transcriptional regulator complement(3174414..3175424) Muricauda ruestringensis DSM 13258 11055727 YP_004789324.1 CDS Murru_2878 NC_015945.1 3175427 3175537 R hypothetical protein complement(3175427..3175537) Muricauda ruestringensis DSM 13258 11055728 YP_004789325.1 CDS Murru_2879 NC_015945.1 3175550 3176002 R PFAM: Protein of unknown function (DUF1569); KEGG: coc:Coch_1869 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3175550..3176002) Muricauda ruestringensis DSM 13258 11055729 YP_004789326.1 CDS Murru_2880 NC_015945.1 3175986 3176420 R PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: cpi:Cpin_5963 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxalase/bleomycin resistance protein/dioxygenase; bleomycin resistance protein complement(3175986..3176420) Muricauda ruestringensis DSM 13258 11055730 YP_004789327.1 CDS Murru_2881 NC_015945.1 3176464 3176961 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: cpi:Cpin_5964 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: AraC family transcriptional regulator; AraC family transcriptional regulator complement(3176464..3176961) Muricauda ruestringensis DSM 13258 11055731 YP_004789328.1 CDS Murru_2882 NC_015945.1 3177054 3177701 R PFAM: Flavodoxin-like fold; COGs: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: cpi:Cpin_4986 ribosyldihydronicotinamide dehydrogenase (quinone); PFAM: Flavodoxin-like fold; PRIAM: NAD(P)H dehydrogenase (quinone); SPTR: Ribosyldihydronicotinamide dehydrogenase (Quinone); NAD(P)H dehydrogenase (quinone) complement(3177054..3177701) Muricauda ruestringensis DSM 13258 11055732 YP_004789329.1 CDS Murru_2883 NC_015945.1 3177793 3178182 D PFAM: HxlR-like helix-turn-helix; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: abb:ABBFA_002249 HxlR-like helix-turn-helix family protein; PFAM: Helix-turn-helix, HxlR type; SPTR: Transcriptional regulator DUF24 family; HxlR family transcriptional regulator 3177793..3178182 Muricauda ruestringensis DSM 13258 11055733 YP_004789330.1 CDS Murru_2884 NC_015945.1 3178249 3178605 R PFAM: HxlR-like helix-turn-helix; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: cpi:Cpin_2703 transcriptional regulator, HxlR family; PFAM: Helix-turn-helix, HxlR type; SPTR: Transcriptional regulator; HxlR family transcriptional regulator complement(3178249..3178605) Muricauda ruestringensis DSM 13258 11055734 YP_004789331.1 CDS Murru_2885 NC_015945.1 3178702 3179232 D PFAM: Flavodoxin-like fold; COGs: COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); InterPro IPR003680; KEGG: dfe:Dfer_0739 NAD(P)H dehydrogenase (quinone); PFAM: Flavodoxin-like fold; SPTR: YrkL; NAD(P)H dehydrogenase (quinone) 3178702..3179232 Muricauda ruestringensis DSM 13258 11055735 YP_004789332.1 CDS Murru_2886 NC_015945.1 3179360 3179722 R PFAM: HxlR-like helix-turn-helix; COGs: COG1733 transcriptional regulator protein; InterPro IPR002577; KEGG: chu:CHU_2490 transcriptional regulator; PFAM: Helix-turn-helix, HxlR type; SPTR: Transcriptional regulator; HxlR family transcriptional regulator complement(3179360..3179722) Muricauda ruestringensis DSM 13258 11055736 YP_004789333.1 CDS Murru_2887 NC_015945.1 3179819 3180328 D PFAM: DoxX; InterPro IPR011637; KEGG: scl:sce2760 hypothetical protein; PFAM: Uncharacterised protein family YphA; SPTR: Putative uncharacterized protein; DoxX family protein 3179819..3180328 Muricauda ruestringensis DSM 13258 11055737 YP_004789334.1 CDS Murru_2888 NC_015945.1 3181100 3181465 R PFAM: Uncharacterized protein conserved in bacteria (DUF2200); COGs: COG4898 conserved hypothetical protein; InterPro IPR014580; KEGG: cpi:Cpin_6024 hypothetical protein; PFAM: Uncharacterised conserved protein UCP033199; SPTR: Putative uncharacterized protein; hypothetical protein complement(3181100..3181465) Muricauda ruestringensis DSM 13258 11055738 YP_004789335.1 CDS Murru_2889 NC_015945.1 3181467 3181859 R PFAM: Domain of unknown function (DU1801); InterPro IPR014922; KEGG: phe:Phep_2410 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: Putative uncharacterized protein; hypothetical protein complement(3181467..3181859) Muricauda ruestringensis DSM 13258 11055739 YP_004789336.1 CDS Murru_2890 NC_015945.1 3182497 3183615 D PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: gfo:GFO_0172 AraC family transcription regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: AraC family transcriptional regulator protein; AraC family transcriptional regulator 3182497..3183615 Muricauda ruestringensis DSM 13258 11055740 YP_004789337.1 CDS Murru_2891 NC_015945.1 3183818 3184306 D PFAM: Protein of unknown function (DUF3225); KEGG: fbc:FB2170_05335 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3183818..3184306 Muricauda ruestringensis DSM 13258 11055741 YP_004789338.1 CDS Murru_2892 NC_015945.1 3184407 3185606 D PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006090; KEGG: ara:Arad_14219 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; SPTR: Acyl-CoA dehydrogenase; acyl-CoA dehydrogenase domain-containing protein 3184407..3185606 Muricauda ruestringensis DSM 13258 11055742 YP_004789339.1 CDS Murru_2893 NC_015945.1 3186234 3187547 D KEGG: zpr:ZPR_1258 TPR repeat-containing protein; SPTR: Putative uncharacterized protein; hypothetical protein 3186234..3187547 Muricauda ruestringensis DSM 13258 11055743 YP_004789340.1 CDS Murru_2894 NC_015945.1 3187550 3188689 D KEGG: gfo:GFO_0834 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3187550..3188689 Muricauda ruestringensis DSM 13258 11055744 YP_004789341.1 CDS Murru_2895 NC_015945.1 3188692 3190719 R PFAM: Sulfatase; COGs: COG1368 Phosphoglycerol transferase and related protein alkaline phosphatase superfamily; InterPro IPR000917; KEGG: gfo:GFO_0833 phosphoglycerol transferase; PFAM: Sulfatase; SPTR: Phosphoglycerol transferase; sulfatase complement(3188692..3190719) Muricauda ruestringensis DSM 13258 11055745 YP_004789342.1 CDS Murru_2896 NC_015945.1 3191055 3195026 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterProIPR000014:IPR001610:IPR003661:IPR003594:IPR 001789:IPR013767:IPR013655:IPR013656; KEGG: gfo:GFO_0848 two-component system sensor histidine kinase/response regulator hybrid; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-3; PAS fold; PAS fold-4; Signal transduction response regulator, receiver domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; PAC motif; Signal transduction response regulator, receiver domain; SPTR: Two-component system sensor histidine kinase/response regulator hybrid; TIGRFAM: PAS; multi-sensor hybrid histidine kinase 3191055..3195026 Muricauda ruestringensis DSM 13258 11055746 YP_004789343.1 CDS Murru_2897 NC_015945.1 3195104 3195820 D PFAM: Hpt domain; InterPro IPR008207; KEGG: gfo:GFO_0847 two-component response transcriptional regulator; PFAM: Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SPTR: Two-component system response regulator containing Hpt phosphotransfer domain; Hpt domain-containing protein 3195104..3195820 Muricauda ruestringensis DSM 13258 11055747 YP_004789344.1 CDS Murru_2898 NC_015945.1 3195817 3196185 D PFAM: Response regulator receiver domain; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: gfo:GFO_0846 response regulator receiver domain-containing protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Two-component response regulator; response regulator receiver protein 3195817..3196185 Muricauda ruestringensis DSM 13258 11055748 YP_004789345.1 CDS Murru_2899 NC_015945.1 3196186 3197199 D KEGG: zpr:ZPR_2296 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3196186..3197199 Muricauda ruestringensis DSM 13258 11055749 YP_004789346.1 CDS Murru_2900 NC_015945.1 3197218 3198651 D PFAM: Glycosyl transferase family 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: zpr:ZPR_2297 transmembrane family-2 glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Transmembrane family-2 glycosyl transferase; family 2 glycosyl transferase 3197218..3198651 Muricauda ruestringensis DSM 13258 11055750 YP_004789347.1 CDS Murru_2901 NC_015945.1 3198909 3202034 R PFAM: Y_Y_Y domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Two component regulator propeller; His Kinase A (phosphoacceptor) domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR011110:IPR011123; KEGG: sli:Slin_1754 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Two component regulator three Y; Two component regulator propeller; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Histidine kinase; histidine kinase complement(3198909..3202034) Muricauda ruestringensis DSM 13258 11055751 YP_004789348.1 CDS Murru_2903 NC_015945.1 3203269 3205644 D PFAM: Cytochrome C and Quinol oxidase polypeptide I; COGs: COG3256 Nitric oxide reductase large subunit; KEGG: gpb:HDN1F_02620 nitric-oxide reductase, subunit B; SPTR: Putative Cytochrome c oxidase subunit I; nitric oxide reductase-like (NorZ); nitric-oxide reductase subunit B 3203269..3205644 Muricauda ruestringensis DSM 13258 11055753 YP_004789349.1 CDS Murru_2904 NC_015945.1 3205631 3205987 D PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein; COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: cps:CPS_2933 putative 6-pyruvoyl tetrahydropterin synthase; PFAM: 6-pyruvoyl tetrahydropterin synthase-related; SPTR: PreQ(0) biosynthesis protein QueD; TIGRFAM: queuosine biosynthesis protein QueD; queuosine biosynthesis protein QueD 3205631..3205987 Muricauda ruestringensis DSM 13258 11055754 YP_004789350.1 CDS Murru_2905 NC_015945.1 3206032 3206484 R PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: fbc:FB2170_03815 hypothetical protein; PFAM: Transcription regulator Rrf2; SPTR: Putative uncharacterized protein; TIGRFAM: Transcription regulator Rrf2; BadM/Rrf2 family transcriptional regulator complement(3206032..3206484) Muricauda ruestringensis DSM 13258 11055755 YP_004789351.1 CDS Murru_2906 NC_015945.1 3206664 3207629 D PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit; COGs: COG0379 Quinolinate synthase; HAMAP: Quinolinate synthase A, type 2; InterPro IPR003473:IPR023066; KEGG: mtt:Ftrac_2720 quinolinate synthetase A; PFAM: Quinolinate synthetase A; PRIAM: Quinolinate synthase; SPTR: Quinolinate synthase A; TIGRFAM: Quinolinate synthetase A; quinolinate synthase A 3206664..3207629 Muricauda ruestringensis DSM 13258 11055756 YP_004789352.1 CDS Murru_2907 NC_015945.1 3207639 3209207 D PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase; COGs: COG0029 Aspartate oxidase; InterPro IPR005288:IPR003953; KEGG: nve:NEMVE_v1g62053 hypothetical protein; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; PRIAM: L-aspartate oxidase; SPTR: Predicted protein; TIGRFAM: L-aspartate oxidase; L-aspartate oxidase 3207639..3209207 Muricauda ruestringensis DSM 13258 11055757 YP_004789353.1 CDS Murru_2908 NC_015945.1 3209294 3211102 R KEGG: fbc:FB2170_02180 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3209294..3211102) Muricauda ruestringensis DSM 13258 11055758 YP_004789354.1 CDS Murru_2909 NC_015945.1 3211293 3213146 R TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; COGs: COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; InterPro IPR014192; KEGG: ilo:IL0188 anaerobic ribonucleoside triphosphate reductase; SPTR: Anaerobic ribonucleoside-triphosphate reductase; TIGRFAM: Anaerobic ribonucleoside-triphosphate reductase class III; anaerobic ribonucleoside-triphosphate reductase complement(3211293..3213146) Muricauda ruestringensis DSM 13258 11055759 YP_004789355.1 CDS Murru_2910 NC_015945.1 3213155 3213604 R TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; InterPro IPR014191; KEGG: cps:CPS_0093 hypothetical protein; SPTR: Anaerobic ribonucleoside-triphosphate reductase activating protein; TIGRFAM: Anaerobic ribonucleoside-triphosphate reductase activator; anaerobic ribonucleoside-triphosphate reductase activating protein complement(3213155..3213604) Muricauda ruestringensis DSM 13258 11055760 YP_004789356.1 CDS Murru_2912 NC_015945.1 3214238 3215041 R KEGG: fbc:FB2170_00315 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3214238..3215041) Muricauda ruestringensis DSM 13258 11055762 YP_004789357.1 CDS Murru_2913 NC_015945.1 3215572 3215931 R PFAM: Helix-turn-helix; COGs: COG5499 transcription regulator containing HTH domain; InterPro IPR001387; KEGG: bfr:BF4068 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; XRE family transcriptional regulator complement(3215572..3215931) Muricauda ruestringensis DSM 13258 11055763 YP_004789358.1 CDS Murru_2914 NC_015945.1 3215934 3216230 R PFAM: Uncharacterized protein conserved in bacteria (DUF2136); COGs: COG4680 conserved hypothetical protein; InterPro IPR018669; KEGG: bfr:BF4067 hypothetical protein; PFAM: Protein of unknown function DUF2136; SPTR: Putative uncharacterized protein; hypothetical protein complement(3215934..3216230) Muricauda ruestringensis DSM 13258 11055764 YP_004789359.1 CDS Murru_2915 NC_015945.1 3216307 3217677 R PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: small GTP-binding protein domain; tRNA modification GTPase TrmE; COGs: COG0486 GTPase; HAMAP: tRNA modification GTPase TrmE; InterPro IPR004520:IPR005225:IPR018948:IPR002917; KEGG: fps:FP0630 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related; SPTR: tRNA modification GTPase mnmE; TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; tRNA modification GTPase mnmE complement(3216307..3217677) Muricauda ruestringensis DSM 13258 11055765 YP_004789360.1 CDS Murru_2916 NC_015945.1 3217764 3218126 D COGs: COG3296 conserved hypothetical protein; KEGG: rbi:RB2501_13554 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3217764..3218126 Muricauda ruestringensis DSM 13258 11055766 YP_004789361.1 CDS Murru_2917 NC_015945.1 3218183 3219301 R PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit; COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001:IPR022634:IPR022637:IPR022635; KEGG: fbc:FB2170_10186 DNA polymerase III subunit beta; PFAM: DNA polymerase III, beta chain, N-terminal; DNA polymerase III, beta chain, central; DNA polymerase III, beta chain, C-terminal; PRIAM: DNA-directed DNA polymerase; SMART: DNA polymerase III, beta chain; SPTR: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta chain; DNA polymerase III subunit beta complement(3218183..3219301) Muricauda ruestringensis DSM 13258 11055767 YP_004789362.1 CDS Murru_2918 NC_015945.1 3219422 3221086 R PFAM: ABC-type uncharacterized transport system; TIGRFAM: gliding-associated putative ABC transporter substrate-binding component GldG; InterPro IPR019863:IPR019196; KEGG: rbi:RB2501_13569 hypothetical protein; PFAM: ABC-type uncharacterised transport system; SPTR: Putative uncharacterized protein; TIGRFAM: Gliding-associated putative ABC transporter substrate-binding GldG; gliding-motility associated ABC transporter substrate-binding component GldG complement(3219422..3221086) Muricauda ruestringensis DSM 13258 11055768 YP_004789363.1 CDS Murru_2919 NC_015945.1 3221086 3221817 R TIGRFAM: gliding motility-associated ABC transporter permease protein GldF; InterPro IPR019860; KEGG: fps:FP1089 gliding motility protein GldF; SPTR: ABC transporter permease; gliding motility-associated protein; TIGRFAM: Gliding motility-associated ABC transporter permease protein GldF; gliding motility-associated ABC transporter permease GldF complement(3221086..3221817) Muricauda ruestringensis DSM 13258 11055769 YP_004789364.1 CDS Murru_2920 NC_015945.1 3221920 3222210 R PFAM: Antibiotic biosynthesis monooxygenase; InterPro IPR007138; KEGG: gfo:GFO_1911 hypothetical protein; PFAM: Antibiotic biosynthesis monooxygenase; SPTR: Putative uncharacterized protein; antibiotic biosynthesis monooxygenase complement(3221920..3222210) Muricauda ruestringensis DSM 13258 11055770 YP_004789365.1 CDS Murru_2921 NC_015945.1 3222211 3223041 R PFAM: S-adenosyl-l-methionine hydroxide adenosyltransferase; COGs: COG1912 conserved hypothetical protein; InterPro IPR002747; KEGG: fbc:FB2170_10196 hypothetical protein; PFAM: Protein of unknown function DUF62; SPTR: Putative uncharacterized protein; hypothetical protein complement(3222211..3223041) Muricauda ruestringensis DSM 13258 11055771 YP_004789366.1 CDS Murru_2922 NC_015945.1 3223161 3224120 D PFAM: PhoH-like protein; COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR003714; KEGG: fbc:FB2170_10201 putative phosphate starvation-inducible PhoH-like protein; PFAM: PhoH-like protein; SPTR: Putative phosphate starvation-inducible PhoH-like protein; PhoH family protein 3223161..3224120 Muricauda ruestringensis DSM 13258 11055772 YP_004789367.1 CDS Murru_2923 NC_015945.1 3224128 3225081 D PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; HAMAP: SAICAR synthetase; InterPro IPR001636; KEGG: zpr:ZPR_1837 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; PRIAM: Phosphoribosylaminoimidazolesuccinocarboxamide synthase; SPTR: Phosphoribosylaminoimidazole-succinocarboxamide synthase; phosphoribosylaminoimidazolesuccinocarboxamide synthase 3224128..3225081 Muricauda ruestringensis DSM 13258 11055773 YP_004789368.1 CDS Murru_2924 NC_015945.1 3225227 3225490 D TIGRFAM: putative solute:sodium symporter small subunit; COGs: COG4327 membrane protein; InterPro IPR019886; KEGG: fbc:FB2170_09736 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Sodium symporter small subunit, predicted; putative solute symporter protein 3225227..3225490 Muricauda ruestringensis DSM 13258 11055774 YP_004789369.1 CDS Murru_2925 NC_015945.1 3225519 3227234 D PFAM: Sodium:solute symporter family; TIGRFAM: probable sodium:solute symporter, VC_2705 subfamily; transporter, SSS family; COGs: COG4147 symporter; InterPro IPR019899:IPR001734; KEGG: fbc:FB2170_09731 putative sodium/solute symporter; PFAM: Sodium/solute symporter; SPTR: Putative sodium/solute symporter; TIGRFAM: Sodium/solute symporter, VC2705 subfamily; putative sodium symporter protein 3225519..3227234 Muricauda ruestringensis DSM 13258 11055775 YP_004789370.1 CDS Murru_2926 NC_015945.1 3227299 3229206 D PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; TIGRFAM: acetate--CoA ligase; COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR011904:IPR000873; KEGG: fbc:FB2170_09726 acetyl-CoA synthetase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Acetate--CoA ligase; SPTR: Acetate/CoA ligase; TIGRFAM: Acetate-CoA ligase; acetate/CoA ligase 3227299..3229206 Muricauda ruestringensis DSM 13258 11055776 YP_004789371.1 CDS Murru_2927 NC_015945.1 3229334 3229987 R PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR006055:IPR013520; KEGG: fjo:Fjoh_2479 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease; SPTR: DNA polymerase III, epsilon subunit; Exonuclease RNase T and DNA polymerase III complement(3229334..3229987) Muricauda ruestringensis DSM 13258 11055777 YP_004789372.1 CDS Murru_2928 NC_015945.1 3229987 3231906 R PFAM: CBS domain; Putative nucleotidyltransferase substrate binding domain; Cyclic nucleotide-binding domain; Putative nucleotidyltransferase DUF294; COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR000595:IPR000644:IPR005105:IPR018821; KEGG: fjo:Fjoh_2480 CBS domain-containing protein; PFAM: Domain of unknown function DUF294, nucleotidyltransferase putative; Cystathionine beta-synthase, core; Cyclic nucleotide-binding domain; Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; SMART: Cyclic nucleotide-binding domain; Cystathionine beta-synthase, core; SPTR: Putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase; putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase complement(3229987..3231906) Muricauda ruestringensis DSM 13258 11055778 YP_004789373.1 CDS Murru_2929 NC_015945.1 3232132 3233676 D KEGG: coc:Coch_1059 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3232132..3233676 Muricauda ruestringensis DSM 13258 11055779 YP_004789374.1 CDS Murru_2930 NC_015945.1 3233698 3234255 D KEGG: gfo:GFO_2811 secreted protein; SPTR: Putative uncharacterized protein; hypothetical protein 3233698..3234255 Muricauda ruestringensis DSM 13258 11055780 YP_004789375.1 CDS Murru_2931 NC_015945.1 3234261 3234887 R KEGG: fjo:Fjoh_1799 hypothetical protein; SPTR: Hypothetical lipoprotein; hypothetical protein complement(3234261..3234887) Muricauda ruestringensis DSM 13258 11055781 YP_004789376.1 CDS Murru_2932 NC_015945.1 3235198 3235581 D KEGG: fbc:FB2170_10364 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3235198..3235581 Muricauda ruestringensis DSM 13258 11055783 YP_004789377.1 CDS Murru_2933 NC_015945.1 3235636 3236481 D PFAM: Aminotransferase class IV; COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR001544; KEGG: fbc:FB2170_10369 4-amino-4-deoxychorismate lyase; PFAM: Aminotransferase, class IV; SPTR: 4-amino-4-deoxychorismate lyase, putative; class IV aminotransferase 3235636..3236481 Muricauda ruestringensis DSM 13258 11055784 YP_004789378.1 CDS Murru_2934 NC_015945.1 3236483 3237043 R PFAM: Uncharacterized ACR, COG1678; COGs: COG1678 Putative transcriptional regulator protein; InterPro IPR003774; KEGG: fbc:FB2170_10374 putative transcriptional regulator; PFAM: Protein of unknown function DUF179; SPTR: Putative transcriptional regulator; hypothetical protein complement(3236483..3237043) Muricauda ruestringensis DSM 13258 11055785 YP_004789379.1 CDS Murru_2935 NC_015945.1 3237165 3237437 R PFAM: Bacterial DNA-binding protein; COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: fbc:FB2170_10379 DNA-binding protein HU-beta; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; SPTR: Histone family protein DNA-binding protein; histone family protein DNA-binding protein complement(3237165..3237437) Muricauda ruestringensis DSM 13258 11055786 YP_004789380.1 CDS Murru_2936 NC_015945.1 3237491 3237646 D hypothetical protein 3237491..3237646 Muricauda ruestringensis DSM 13258 11055787 YP_004789381.1 CDS Murru_2937 NC_015945.1 3237614 3238576 R PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase; COGs: COG0223 Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; InterPro IPR005794:IPR002376:IPR005793; KEGG: fbc:FB2170_10384 methionyl-tRNA formyltransferase; PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal; PRIAM: Methionyl-tRNA formyltransferase; SPTR: Methionyl-tRNA formyltransferase; TIGRFAM: Methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase complement(3237614..3238576) Muricauda ruestringensis DSM 13258 11055788 YP_004789382.1 CDS Murru_2938 NC_015945.1 3238557 3240449 R PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase, RecQ family; COGs: COG0514 Superfamily II DNA helicase; InterPro IPR004589:IPR014001:IPR001650:IPR011545; KEGG: fbc:FB2170_10389 ATP-dependent DNA helicase RecQ; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent DNA helicase recQ; TIGRFAM: DNA helicase, ATP-dependent, RecQ type; RecQ familyATP-dependent DNA helicase complement(3238557..3240449) Muricauda ruestringensis DSM 13258 11055789 YP_004789383.1 CDS Murru_2939 NC_015945.1 3240449 3241012 R COGs: COG3911 ATPase; KEGG: fbc:FB2170_10394 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3240449..3241012) Muricauda ruestringensis DSM 13258 11055790 YP_004789384.1 CDS Murru_2940 NC_015945.1 3241101 3241388 D PFAM: Protein of unknown function (DUF493); KEGG: fbc:FB2170_10399 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3241101..3241388 Muricauda ruestringensis DSM 13258 11055791 YP_004789385.1 CDS Murru_2941 NC_015945.1 3241417 3242124 D KEGG: fbc:FB2170_10404 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3241417..3242124 Muricauda ruestringensis DSM 13258 11055792 YP_004789386.1 CDS Murru_2942 NC_015945.1 3242140 3243447 D PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; InterPro IPR005750:IPR001986; KEGG: fbc:FB2170_10409 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: Enolpyruvate transferase domain; PRIAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; SPTR: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; UDP-N-acetylglucosamine1- carboxyvinyltransferase 3242140..3243447 Muricauda ruestringensis DSM 13258 11055793 YP_004789387.1 CDS Murru_2943 NC_015945.1 3243448 3243858 R PFAM: Activator of Hsp90 ATPase homolog 1-like protein; COGs: COG3832 conserved hypothetical protein; InterPro IPR013538; KEGG: lbf:LBF_1056 hypothetical protein; PFAM: Activator of Hsp90 ATPase homologue 1-like; SPTR: Activator of Hsp90 ATPase 1 family protein; Activator of Hsp90 ATPase 1 family protein complement(3243448..3243858) Muricauda ruestringensis DSM 13258 11055794 YP_004789388.1 CDS Murru_2944 NC_015945.1 3243878 3244372 R PFAM: Activator of Hsp90 ATPase homolog 1-like protein; COGs: COG3832 conserved hypothetical protein; InterPro IPR013538; KEGG: fjo:Fjoh_2147 activator of HSP90 ATPase 1 family protein; PFAM: Activator of Hsp90 ATPase homologue 1-like; SPTR: Activator of Hsp90 ATPase 1 family protein; Activator of Hsp90 ATPase 1 family protein complement(3243878..3244372) Muricauda ruestringensis DSM 13258 11055795 YP_004789389.1 CDS Murru_2945 NC_015945.1 3244378 3244704 R PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: dfe:Dfer_0489 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: ArsR family transcriptional regulator; regulatory protein ArsR complement(3244378..3244704) Muricauda ruestringensis DSM 13258 11055796 YP_004789390.1 CDS Murru_2946 NC_015945.1 3244855 3245856 R PFAM: Pirin C-terminal cupin domain; Pirin; COGs: COG1741 Pirin-related protein; InterPro IPR003829:IPR008778; KEGG: mtt:Ftrac_0045 pirin domain protein; PFAM: Pirin, C-terminal; Pirin, N-terminal; SPTR: Putative uncharacterized protein; Pirin domain-containing protein complement(3244855..3245856) Muricauda ruestringensis DSM 13258 11055797 YP_004789391.1 CDS Murru_2947 NC_015945.1 3246021 3247448 R PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168:IPR002933:IPR011650; KEGG: fbc:FB2170_10424 hypothetical protein; PFAM: Peptidase M20; Peptidase M20, dimerisation; SPTR: Putative uncharacterized protein; TIGRFAM: Peptidase M20D, amidohydrolase; amidohydrolase complement(3246021..3247448) Muricauda ruestringensis DSM 13258 11055798 YP_004789392.1 CDS Murru_2948 NC_015945.1 3247545 3248858 R PFAM: FAD binding domain of DNA photolyase; DNA photolyase; COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR006050:IPR005101; KEGG: fbc:FB2170_10429 deoxyribodipyrimidine photolyase-class I; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; PRIAM: Deoxyribodipyrimidine photo-lyase; SPTR: Deoxyribodipyrimidine photolyase-class I; deoxyribodipyrimidine photo-lyase complement(3247545..3248858) Muricauda ruestringensis DSM 13258 11055799 YP_004789393.1 CDS Murru_2949 NC_015945.1 3248858 3249550 R PFAM: short chain dehydrogenase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: zpr:ZPR_2314 short-chain dehydrogenase/reductase family protein; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short chain dehydrogenase; 3-oxoacyl-ACP reductase complement(3248858..3249550) Muricauda ruestringensis DSM 13258 11055800 YP_004789394.1 CDS Murru_2950 NC_015945.1 3249552 3250049 R KEGG: gfo:GFO_1820 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3249552..3250049) Muricauda ruestringensis DSM 13258 11055801 YP_004789395.1 CDS Murru_2951 NC_015945.1 3250225 3251079 D PFAM: Protein of unknown function (DUF2911); KEGG: rbi:RB2501_13729 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3250225..3251079 Muricauda ruestringensis DSM 13258 11055802 YP_004789396.1 CDS Murru_2952 NC_015945.1 3251134 3252843 R PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG0591 Na+/proline symporter; InterPro IPR019900:IPR001734; KEGG: rbi:RB2501_13734 sodium iodide symporter; PFAM: Sodium/solute symporter; SPTR: Sodium iodide symporter; TIGRFAM: Sodium/solute symporter, subgroup; SSS sodium solute transporter superfamily protein complement(3251134..3252843) Muricauda ruestringensis DSM 13258 11055803 YP_004789397.1 CDS Murru_2953 NC_015945.1 3252852 3252968 R hypothetical protein complement(3252852..3252968) Muricauda ruestringensis DSM 13258 11055804 YP_004789398.1 CDS Murru_2954 NC_015945.1 3252955 3255486 R PFAM: GlcNAc-PI de-N-acetylase; InterPro IPR003737; KEGG: fbc:FB2170_10489 hypothetical protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; SPTR: Putative uncharacterized protein; LmbE family protein complement(3252955..3255486) Muricauda ruestringensis DSM 13258 11055805 YP_004789399.1 CDS Murru_2955 NC_015945.1 3255579 3256535 R KEGG: fbc:FB2170_10499 Maf-like protein; SPTR: Maf-like protein; Maf-like protein complement(3255579..3256535) Muricauda ruestringensis DSM 13258 11055806 YP_004789400.1 CDS Murru_2956 NC_015945.1 3256571 3257203 R PFAM: Maf-like protein; TIGRFAM: MAF protein; COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; HAMAP: Maf-like protein; InterPro IPR003697; KEGG: fjo:Fjoh_2955 Maf-like protein; PFAM: Maf-like protein; SPTR: Maf-like protein KAOT1_09024; TIGRFAM: Maf-like protein; Septum formation protein Maf complement(3256571..3257203) Muricauda ruestringensis DSM 13258 11055807 YP_004789401.1 CDS Murru_2957 NC_015945.1 3257163 3257690 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR010023:IPR006549; KEGG: rbi:RB2501_13764 putative hydrolase; SPTR: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(3257163..3257690) Muricauda ruestringensis DSM 13258 11055808 YP_004789402.1 CDS Murru_2958 NC_015945.1 3257674 3258435 R PFAM: NADP oxidoreductase coenzyme F420-dependent; Domain of unknown function (DUF2520); InterPro IPR018931; KEGG: fps:FP1419 hypothetical protein; PFAM: Domain of unknown function DUF2520; SPTR: Putative uncharacterized protein; hypothetical protein complement(3257674..3258435) Muricauda ruestringensis DSM 13258 11055809 YP_004789403.1 CDS Murru_2959 NC_015945.1 3258569 3261736 D PFAM: Cytochrome C assembly protein; ResB-like family; TIGRFAM: cytochrome c-type biogenesis protein CcsB; COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541; KEGG: fbc:FB2170_10536 cytochrome c assembly protein; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c assembly protein; cytochrome c assembly protein 3258569..3261736 Muricauda ruestringensis DSM 13258 11055810 YP_004789404.1 CDS Murru_2960 NC_015945.1 3261738 3263033 R PFAM: Zinc carboxypeptidase; InterPro IPR000834; KEGG: rbi:RB2501_13074 hypothetical protein; PFAM: Peptidase M14, carboxypeptidase A; SMART: Peptidase M14, carboxypeptidase A; SPTR: Putative uncharacterized protein; peptidase M14 carboxypeptidase A complement(3261738..3263033) Muricauda ruestringensis DSM 13258 11055811 YP_004789405.1 CDS Murru_2961 NC_015945.1 3263266 3264675 D PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: fbc:FB2170_10576 multi antimicrobial extrusion family drug/sodium antiporter; PFAM: Multi antimicrobial extrusion protein; SPTR: Multi antimicrobial extrusion family drug/sodium antiporter; TIGRFAM: Multi antimicrobial extrusion protein; MATE efflux family protein 3263266..3264675 Muricauda ruestringensis DSM 13258 11055812 YP_004789406.1 CDS Murru_2962 NC_015945.1 3264711 3265904 D PFAM: Cys/Met metabolism PLP-dependent enzyme; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: fbc:FB2170_10581 cystathionine beta-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cystathionine gamma-lyase; SPTR: Cystathionine beta-lyase; cystathionine gamma-synthase 3264711..3265904 Muricauda ruestringensis DSM 13258 11055813 YP_004789407.1 CDS Murru_2963 NC_015945.1 3265911 3266633 D PFAM: GlcNAc-PI de-N-acetylase; TIGRFAM: bacillithiol biosynthesis deacetylase BshB1; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: fbc:FB2170_10586 hypothetical protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; SPTR: Putative uncharacterized protein; LmbE family protein 3265911..3266633 Muricauda ruestringensis DSM 13258 11055814 YP_004789408.1 CDS Murru_2964 NC_015945.1 3266634 3268724 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR019734:IPR003594:IPR001440; KEGG: fbc:FB2170_10591 sensor histidine kinase/response regulator; PFAM: ATPase-like, ATP-binding domain; Tetratricopeptide TPR-1; SMART: ATPase-like, ATP-binding domain; Tetratricopeptide repeat; SPTR: Sensor histidine kinase/response regulator; multi-sensor signal transduction histidine kinase complement(3266634..3268724) Muricauda ruestringensis DSM 13258 11055815 YP_004789409.1 CDS Murru_2965 NC_015945.1 3269175 3270731 R PFAM: PA domain; Peptidase family M28; COGs: COG2234 aminopeptidase; InterPro IPR007484; KEGG: fbc:FB2170_10596 putative aminopeptidase; PFAM: Peptidase M28; SPTR: Putative aminopeptidase; peptidase M28 complement(3269175..3270731) Muricauda ruestringensis DSM 13258 11055817 YP_004789410.1 CDS Murru_2966 NC_015945.1 3270865 3272121 D PFAM: FAD dependent oxidoreductase; COGs: COG0665 Glycine/D-amino acid oxidase (deaminating); InterPro IPR006076; KEGG: fbc:FB2170_10621 D-amino acid dehydrogenase; PFAM: FAD dependent oxidoreductase; PRIAM: D-amino-acid dehydrogenase; SPTR: D-amino acid dehydrogenase; D-amino-acid dehydrogenase 3270865..3272121 Muricauda ruestringensis DSM 13258 11055818 YP_004789411.1 CDS Murru_2967 NC_015945.1 3272199 3273125 D KEGG: fbc:FB2170_12931 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3272199..3273125 Muricauda ruestringensis DSM 13258 11055819 YP_004789412.1 CDS Murru_2968 NC_015945.1 3273129 3273773 R PFAM: Phospholipase/Carboxylesterase; KEGG: fbc:FB2170_12921 esterase/lipase; SPTR: Esterase/lipase, putative; esterase/lipase complement(3273129..3273773) Muricauda ruestringensis DSM 13258 11055820 YP_004789413.1 CDS Murru_2969 NC_015945.1 3273836 3274258 D PFAM: Thioesterase superfamily; TIGRFAM: uncharacterized domain 1; COGs: COG2050 Uncharacterized protein possibly involved in aromatic compounds catabolism; InterPro IPR003736:IPR006683; KEGG: fbc:FB2170_12916 hypothetical protein; PFAM: Thioesterase superfamily; SPTR: Putative uncharacterized protein; TIGRFAM: Phenylacetic acid degradation-related protein; phenylacetic acid degradation-like protein 3273836..3274258 Muricauda ruestringensis DSM 13258 11055821 YP_004789414.1 CDS Murru_2970 NC_015945.1 3274239 3275300 D PFAM: chorismate binding enzyme; TIGRFAM: isochorismate synthases; COGs: COG1169 Isochorismate synthase; InterPro IPR004561:IPR015890; KEGG: fbc:FB2170_12911 isochorismate synthase EntC; PFAM: Chorismate binding, C-terminal; SPTR: Isochorismate synthase entC; TIGRFAM: Isochorismate synthase; isochorismate synthase 3274239..3275300 Muricauda ruestringensis DSM 13258 11055822 YP_004789415.1 CDS Murru_2971 NC_015945.1 3275355 3277097 D PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1- carboxylic-acid synthase; COGs: COG1165 2-succinyl-6-hydroxy-2 4-cyclohexadiene-1-carboxylate synthase; HAMAP: Menaquinone biosynthesis protein MenD; InterPro IPR004433; KEGG: fbc:FB2170_12906 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase; PRIAM:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohex ene-1-carboxylic-acidsynthase; SPTR:2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexe ne-1-carboxylatesynthase; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 3275355..3277097 Muricauda ruestringensis DSM 13258 11055823 YP_004789416.1 CDS Murru_2972 NC_015945.1 3277136 3277477 D PFAM: Protein of unknown function (DUF2853); KEGG: fbc:FB2170_12901 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3277136..3277477 Muricauda ruestringensis DSM 13258 11055824 YP_004789417.1 CDS Murru_2973 NC_015945.1 3277658 3278488 D COGs: COG2996 conserved hypothetical protein; KEGG: rbi:RB2501_15729 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3277658..3278488 Muricauda ruestringensis DSM 13258 11055825 YP_004789418.1 CDS Murru_2974 NC_015945.1 3278634 3279233 D PFAM: Sporulation related domain; InterPro IPR007730; KEGG: fbc:FB2170_12891 hypothetical protein; PFAM: Sporulation-related domain; SPTR: Putative uncharacterized protein; sporulation domain-containing protein 3278634..3279233 Muricauda ruestringensis DSM 13258 11055826 YP_004789419.1 CDS Murru_2975 NC_015945.1 3279236 3280144 D PFAM: UbiA prenyltransferase family; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; COGs: COG1575 1 4-dihydroxy-2-naphthoate octaprenyltransferase; InterPro IPR004657:IPR000537; KEGG: fbc:FB2170_12886 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; SPTR: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; 1,4-dihydroxy-2-naphthoateoctaprenyltransferase 3279236..3280144 Muricauda ruestringensis DSM 13258 11055827 YP_004789420.1 CDS Murru_2976 NC_015945.1 3280178 3280927 D PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR001789:IPR007492; KEGG: fbc:FB2170_12881 response regulator receiver signal transduction histidine kinase; PFAM: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SMART: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SPTR: Response regulator receiver signal transduction histidine kinase; LytTR family two component transcriptional regulator 3280178..3280927 Muricauda ruestringensis DSM 13258 11055828 YP_004789421.1 CDS Murru_2977 NC_015945.1 3281465 3283426 D PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG3920 Signal transduction histidine kinase; InterPro IPR003594:IPR011495; KEGG: fbc:FB2170_12866 two-component hybrid sensor and regulator; PFAM: Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Two-component hybrid sensor and regulator; signal transduction histidine kinase 3281465..3283426 Muricauda ruestringensis DSM 13258 11055829 YP_004789422.1 CDS Murru_2978 NC_015945.1 3283482 3284534 D PFAM: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain; TIGRFAM: o-succinylbenzoate synthase; COGs: COG4948 L-alanine-DL-glutamate epimerase; InterPro IPR010196:IPR013342; KEGG: zpr:ZPR_3063 O-succinylbenzoate synthase; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SPTR: O-succinylbenzoate synthase; TIGRFAM: O-succinylbenzoic acid (OSB) synthetase; o-succinylbenzoic acid (OSB) synthetase 3283482..3284534 Muricauda ruestringensis DSM 13258 11055830 YP_004789423.1 CDS Murru_2979 NC_015945.1 3284525 3285487 D PFAM: CAAX amino terminal protease family; InterPro IPR003675; KEGG: fbc:FB2170_12846 hypothetical protein; PFAM: Abortive infection protein; SPTR: Putative uncharacterized protein; abortive infection protein 3284525..3285487 Muricauda ruestringensis DSM 13258 11055831 YP_004789424.1 CDS Murru_2980 NC_015945.1 3285465 3286538 D PFAM: AMP-binding enzyme; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: fbc:FB2170_12841 O-succinylbenzoic acid-CoA ligase; PFAM: AMP-dependent synthetase/ligase; SPTR: O-succinylbenzoic acid-CoA ligase; AMP-dependent synthetase and ligase 3285465..3286538 Muricauda ruestringensis DSM 13258 11055832 YP_004789425.1 CDS Murru_2981 NC_015945.1 3286737 3288083 D PFAM: Metallopeptidase family M24; KEGG: fbc:FB2170_12836 Xaa-Pro aminopeptidase family enzyme; SPTR: Xaa-Pro aminopeptidase family enzyme; Xaa-Pro aminopeptidase family protein 3286737..3288083 Muricauda ruestringensis DSM 13258 11055833 YP_004789426.1 CDS Murru_2982 NC_015945.1 3288088 3289716 R PFAM: Carboxyl transferase domain; COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR000022; KEGG: fbc:FB2170_12821 propionyl-CoA carboxylase subunit beta; PFAM: Carboxyl transferase; PRIAM: Methylcrotonoyl-CoA carboxylase; SPTR: Propionyl-CoA carboxylase, beta subunit, putative; methylcrotonoyl-CoA carboxylase complement(3288088..3289716) Muricauda ruestringensis DSM 13258 11055834 YP_004789427.1 CDS Murru_2983 NC_015945.1 3289779 3290762 D PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: fbc:FB2170_12816 putative dehydrogenase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; PRIAM: Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase; SPTR: Predicted dehydrogenase; trans-1,2-dihydrobenzene-1,2-diol dehydrogenase 3289779..3290762 Muricauda ruestringensis DSM 13258 11055835 YP_004789428.1 CDS Murru_2984 NC_015945.1 3290835 3291011 D KEGG: cat:CA2559_08321 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3290835..3291011 Muricauda ruestringensis DSM 13258 11055836 YP_004789429.1 CDS Murru_2985 NC_015945.1 3291045 3292736 D PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: fbc:FB2170_12806 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Putative ATP-binding component of ABC transporter; ABC transporter-like protein 3291045..3292736 Muricauda ruestringensis DSM 13258 11055837 YP_004789430.1 CDS Murru_2986 NC_015945.1 3292745 3293434 R SPTR: Putative uncharacterized protein; hypothetical protein complement(3292745..3293434) Muricauda ruestringensis DSM 13258 11055838 YP_004789431.1 CDS Murru_2987 NC_015945.1 3293500 3294297 R COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: fbc:FB2170_12801 putative metal-dependent hydrolase; SPTR: Putative metal-dependent hydrolase; putative metal-dependent hydrolase complement(3293500..3294297) Muricauda ruestringensis DSM 13258 11055839 YP_004789432.1 CDS Murru_2988 NC_015945.1 3294464 3295354 D KEGG: fbc:FB2170_12791 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3294464..3295354 Muricauda ruestringensis DSM 13258 11055840 YP_004789433.1 CDS Murru_2989 NC_015945.1 3295432 3296829 R PFAM: Fumarase C C-terminus; Lyase; TIGRFAM: fumarate hydratase, class II; COGs: COG0114 Fumarase; HAMAP: Fumarate hydratase, class II; InterPro IPR005677:IPR022761:IPR018951; KEGG: fbc:FB2170_12786 fumarate hydratase; PFAM: Lyase 1, N-terminal; Fumarase C, C-terminal; PRIAM: Fumarate hydratase; SPTR: Fumarate hydratase; TIGRFAM: Fumarate hydratase, class II; class II fumarate hydratase complement(3295432..3296829) Muricauda ruestringensis DSM 13258 11055841 YP_004789434.1 CDS Murru_2990 NC_015945.1 3296968 3297141 D KEGG: fbc:FB2170_12781 fumarate hydratase; SPTR: Fumarate hydratase; fumarate hydratase 3296968..3297141 Muricauda ruestringensis DSM 13258 11055842 YP_004789435.1 CDS Murru_2991 NC_015945.1 3297329 3299812 R PFAM: TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: rbi:RB2501_15614 TonB-dependent receptor domain-containing protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor domain protein; TonB-dependent receptor complement(3297329..3299812) Muricauda ruestringensis DSM 13258 11055843 YP_004789436.1 CDS Murru_2992 NC_015945.1 3299914 3300408 R KEGG: fbc:FB2170_12771 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3299914..3300408) Muricauda ruestringensis DSM 13258 11055844 YP_004789437.1 CDS Murru_2993 NC_015945.1 3300477 3300818 R PFAM: ArsC family; TIGRFAM: arsenate reductase (glutaredoxin); COGs: COG1393 Arsenate reductase and related protein glutaredoxin family; InterPro IPR006659:IPR006660; KEGG: fbc:FB2170_12766 arsenate reductase; PFAM: Arsenate reductase-like; SPTR: Arsenate reductase; TIGRFAM: Arsenate reductase; arsenate reductase complement(3300477..3300818) Muricauda ruestringensis DSM 13258 11055845 YP_004789438.1 CDS Murru_2994 NC_015945.1 3300829 3301930 R PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; peptide chain release factor 2 complement(join(3300829..3301866,3301868..3301930)) Muricauda ruestringensis DSM 13258 11055846 YP_004789439.1 CDS Murru_2995 NC_015945.1 3302128 3302349 D hypothetical protein 3302128..3302349 Muricauda ruestringensis DSM 13258 11055847 YP_004789440.1 CDS Murru_2996 NC_015945.1 3302386 3304788 D KEGG: fbc:FB2170_12751 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3302386..3304788 Muricauda ruestringensis DSM 13258 11055848 YP_004789441.1 CDS Murru_2997 NC_015945.1 3304797 3305822 D PFAM: Beta-eliminating lyase; COGs: COG2008 Threonine aldolase; InterPro IPR001597; KEGG: fbc:FB2170_12746 L-allo-threonine aldolase; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase; PRIAM: Threonine aldolase; SPTR: L-allo-threonine aldolase; threonine aldolase 3304797..3305822 Muricauda ruestringensis DSM 13258 11055849 YP_004789442.1 CDS Murru_2998 NC_015945.1 3306079 3306375 D PFAM: GIY-YIG catalytic domain; COGs: COG2827 endonuclease containing a URI domain; InterPro IPR000305; KEGG: fjo:Fjoh_0254 excinuclease ABC subunit C; PFAM: Excinuclease ABC, C subunit, N-terminal; SPTR: Predicted endonuclease containing a URI domain; excinuclease ABC C subunit domain-containing protein 3306079..3306375 Muricauda ruestringensis DSM 13258 11055850 YP_004789443.1 CDS Murru_2999 NC_015945.1 3306586 3306912 R PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family; HAMAP: Uncharacterised protein family UPF0133; InterPro IPR004401; KEGG: gfo:GFO_1796 hypothetical protein; PFAM: Uncharacterised protein family UPF0133; SPTR: UPF0133 protein GFO_1796; TIGRFAM: Uncharacterised protein family UPF0133; hypothetical protein complement(3306586..3306912) Muricauda ruestringensis DSM 13258 11055851 YP_004789444.1 CDS Murru_3000 NC_015945.1 3307016 3309154 D PFAM: Prolyl oligopeptidase, N-terminal beta-propeller domain; Prolyl oligopeptidase family; COGs: COG1770 Protease II; InterPro IPR004106:IPR001375; KEGG: fbc:FB2170_12726 hypothetical protein; PFAM: Peptidase S9A, oligopeptidase, N-terminal beta-propeller; Peptidase S9, prolyl oligopeptidase, catalytic domain; PRIAM: Oligopeptidase B; SPTR: Putative uncharacterized protein; oligopeptidase B 3307016..3309154 Muricauda ruestringensis DSM 13258 11055852 YP_004789445.1 CDS Murru_3001 NC_015945.1 3309225 3310265 D PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cystathionine beta-synthase; COGs: COG0031 Cysteine synthase; InterPro IPR001926; KEGG: fbc:FB2170_12721 cystathionine beta-synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Cysteine synthase; SPTR: Cystathionine beta-synthase; cysteine synthase 3309225..3310265 Muricauda ruestringensis DSM 13258 11055853 YP_004789446.1 CDS Murru_3002 NC_015945.1 3310390 3311649 D PFAM: Aminotransferase class I and II; COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839; KEGG: fbc:FB2170_12716 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/classII; PRIAM: 8-amino-7-oxononanoate synthase; SPTR: 8-amino-7-oxononanoate synthase; 8-amino-7-oxononanoate synthase 3310390..3311649 Muricauda ruestringensis DSM 13258 11055854 YP_004789447.1 CDS Murru_3003 NC_015945.1 3311738 3312688 R PFAM: Carbon-nitrogen hydrolase; COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: fbc:FB2170_01487 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(3311738..3312688) Muricauda ruestringensis DSM 13258 11055855 YP_004789448.1 CDS Murru_3004 NC_015945.1 3312776 3313573 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: fjo:Fjoh_1287 helix-turn-helix domain-containing protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Helix-turn-helix domain protein; AraC family transcriptional regulator complement(3312776..3313573) Muricauda ruestringensis DSM 13258 11055856 YP_004789449.1 CDS Murru_3005 NC_015945.1 3313830 3314516 R KEGG: mtt:Ftrac_1318 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3313830..3314516) Muricauda ruestringensis DSM 13258 11055857 YP_004789450.1 CDS Murru_3006 NC_015945.1 3315073 3316050 R PFAM: Integrase core domain; COGs: COG2801 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: lby:Lbys_0529 integrase catalytic region; PFAM: Integrase, catalytic core; SPTR: Helix-turn-helix, Fis-type protein; integrase catalytic subunit complement(3315073..3316050) Muricauda ruestringensis DSM 13258 11055858 YP_004789451.1 CDS Murru_3007 NC_015945.1 3316065 3316412 R PFAM: Transposase; InterPro IPR002514; KEGG: mch:Mchl_5506 transposase IS3/IS911 family protein; PFAM: Transposase IS3/IS911family; SPTR: Transposase subfamily protein; transposase IS3/IS911 family protein complement(3316065..3316412) Muricauda ruestringensis DSM 13258 11055859 YP_004789452.1 CDS Murru_3008 NC_015945.1 3316521 3318773 R PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR003439; KEGG: cpi:Cpin_3040 ABC transporter related; PFAM: ABC transporter-like; SPTR: ABC transporter related; ABC transporter-like protein complement(3316521..3318773) Muricauda ruestringensis DSM 13258 11055860 YP_004789453.1 CDS Murru_3009 NC_015945.1 3318964 3319551 R hypothetical protein complement(3318964..3319551) Muricauda ruestringensis DSM 13258 11055861 YP_004789454.1 CDS Murru_3010 NC_015945.1 3319779 3320135 R SPTR: Putative uncharacterized protein; hypothetical protein complement(3319779..3320135) Muricauda ruestringensis DSM 13258 11055862 YP_004789455.1 CDS Murru_3011 NC_015945.1 3320353 3320946 R TIGRFAM: acyl carrier protein; InterPro IPR006163; KEGG: rba:RB2934 acyl carrier protein; PFAM: Phosphopantetheine-binding; SPTR: Putative uncharacterized protein; phosphopantetheine-binding protein complement(3320353..3320946) Muricauda ruestringensis DSM 13258 11055863 YP_004789456.1 CDS Murru_3012 NC_015945.1 3321099 3322214 R PFAM: Phage integrase family; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: cat:CA2559_00230 putative tyrosine recombinase; PFAM: Integrase, catalytic core, phage; SPTR: Tyrosine type site-specific recombinase; integrase family protein complement(3321099..3322214) Muricauda ruestringensis DSM 13258 11055864 YP_004789457.1 CDS Murru_3014 NC_015945.1 3322625 3323407 R PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: mmr:Mmar10_1233 methyltransferase type 11; PFAM: Fatty acid hydroxylase; SPTR: Methyltransferase type 11; fatty acid hydroxylase complement(3322625..3323407) Muricauda ruestringensis DSM 13258 11055866 YP_004789458.1 CDS Murru_3015 NC_015945.1 3323527 3324396 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR018060:IPR000005; KEGG: fbc:FB2170_12971 putative transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: AraC family transcriptional regulator; AraC family transcriptional regulator complement(3323527..3324396) Muricauda ruestringensis DSM 13258 11055867 YP_004789459.1 CDS Murru_3016 NC_015945.1 3324583 3325701 R KEGG: fbc:FB2170_12711 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3324583..3325701) Muricauda ruestringensis DSM 13258 11055868 YP_004789460.1 CDS Murru_3017 NC_015945.1 3325786 3326748 R KEGG: rbi:RB2501_15534 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3325786..3326748) Muricauda ruestringensis DSM 13258 11055869 YP_004789461.1 CDS Murru_3018 NC_015945.1 3326836 3327096 D KEGG: fbc:FB2170_12701 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3326836..3327096 Muricauda ruestringensis DSM 13258 11055870 YP_004789462.1 CDS Murru_3019 NC_015945.1 3327121 3329553 D PFAM: Bacterial membrane protein YfhO; InterPro IPR018580; KEGG: fbc:FB2170_12696 hypothetical protein; PFAM: Uncharacterised protein family YfhO; SPTR: Putative uncharacterized protein; hypothetical protein 3327121..3329553 Muricauda ruestringensis DSM 13258 11055871 YP_004789463.1 CDS Murru_3020 NC_015945.1 3329553 3330821 D KEGG: fbc:FB2170_12691 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3329553..3330821 Muricauda ruestringensis DSM 13258 11055872 YP_004789464.1 CDS Murru_3021 NC_015945.1 3330821 3332281 D PFAM: Polysaccharide biosynthesis protein; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: fbc:FB2170_12686 hypothetical protein; PFAM: Polysaccharide biosynthesis protein; SPTR: Putative uncharacterized protein; polysaccharide biosynthesis protein 3330821..3332281 Muricauda ruestringensis DSM 13258 11055873 YP_004789465.1 CDS Murru_3022 NC_015945.1 3332332 3333546 R KEGG: rbi:RB2501_15509 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3332332..3333546) Muricauda ruestringensis DSM 13258 11055874 YP_004789466.1 CDS Murru_3023 NC_015945.1 3333983 3335920 R PFAM: WD40-like Beta Propeller Repeat; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR011659:IPR006665; KEGG: cat:CA2559_13643 OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; WD40-like Beta Propeller; SPTR: Outer membrane protein, peptidoglycan-associated lipoprotein; OmpA/MotB domain-containing protein complement(3333983..3335920) Muricauda ruestringensis DSM 13258 11055875 YP_004789467.1 CDS Murru_3024 NC_015945.1 3335931 3336887 R PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: cat:CA2559_13648 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein complement(3335931..3336887) Muricauda ruestringensis DSM 13258 11055876 YP_004789468.1 CDS Murru_3025 NC_015945.1 3336935 3340216 R InterPro IPR001434; KEGG: cat:CA2559_00005 transcriptional regulator, AraC family with parallel beta-helix repeat; SPTR: Transcriptional regulator, AraC family with Parallel beta-helix repeat; TIGRFAM: Domain of unknown function DUF11; hypothetical protein complement(3336935..3340216) Muricauda ruestringensis DSM 13258 11055877 YP_004789469.1 CDS Murru_3026 NC_015945.1 3340651 3342585 R PFAM: WD40-like Beta Propeller Repeat; Cna protein B-type domain; OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR013105:IPR011659:IPR008454:IPR006665; KEGG: cat:CA2559_13643 OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Collagen-binding surface protein Cna-like, B-type domain; Tetratricopeptide TPR2; WD40-like Beta Propeller; SPTR: OmpA family protein; OmpA/MotB domain-containing protein complement(3340651..3342585) Muricauda ruestringensis DSM 13258 11055878 YP_004789470.1 CDS Murru_3027 NC_015945.1 3342598 3343572 R PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: cat:CA2559_13648 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein complement(3342598..3343572) Muricauda ruestringensis DSM 13258 11055879 YP_004789471.1 CDS Murru_3028 NC_015945.1 3343596 3348917 R TIGRFAM: conserved repeat domain; InterPro IPR001434:IPR010221; KEGG: cat:CA2559_00005 transcriptional regulator, AraC family with parallel beta-helix repeat; SPTR: Transcriptional regulator, AraC family with Parallel beta-helix repeat; TIGRFAM: Domain of unknown function DUF11; VCBS repeat; hypothetical protein complement(3343596..3348917) Muricauda ruestringensis DSM 13258 11055880 YP_004789472.1 CDS Murru_3029 NC_015945.1 3349438 3352215 R PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR004602:IPR003439; KEGG: fbc:FB2170_12676 excinuclease ABC subunit A; PFAM: ABC transporter-like; SPTR: Excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit; excinuclease ABC subunit A complement(3349438..3352215) Muricauda ruestringensis DSM 13258 11055881 YP_004789473.1 CDS Murru_3030 NC_015945.1 3352467 3353051 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: fbc:FB2170_12661 ECF family RNA polymerase sigma-70 factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SPTR: RNA polymerase sigma-70 factor, ECF subfamily protein; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 3352467..3353051 Muricauda ruestringensis DSM 13258 11055882 YP_004789474.1 CDS Murru_3031 NC_015945.1 3353305 3353967 R PFAM: HhH-GPD superfamily base excision DNA repair protein; TIGRFAM: endonuclease III; COGs: COG0177 EndoIII-related endonuclease; InterPro IPR003265; KEGG: fbc:FB2170_12656 putative endonuclease; PFAM: HhH-GPD domain; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD domain; SPTR: Putative endonuclease; DNA-(apurinic or apyrimidinic site) lyase complement(3353305..3353967) Muricauda ruestringensis DSM 13258 11055883 YP_004789475.1 CDS Murru_3032 NC_015945.1 3354029 3354475 D PFAM: AhpC/TSA family; COGs: COG1225 Peroxiredoxin; InterPro IPR000866; KEGG: fbc:FB2170_12651 bacterioferritin comigratory protein; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; PRIAM: Peroxiredoxin; SPTR: Bacterioferritin comigratory protein; peroxiredoxin 3354029..3354475 Muricauda ruestringensis DSM 13258 11055884 YP_004789476.1 CDS Murru_3033 NC_015945.1 3354707 3356161 R KEGG: rbi:RB2501_15469 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3354707..3356161) Muricauda ruestringensis DSM 13258 11055885 YP_004789477.1 CDS Murru_3034 NC_015945.1 3356239 3357015 D PFAM: Metallo-beta-lactamase superfamily; COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; InterPro IPR001279; KEGG: fbc:FB2170_12641 putative hydrolase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like; SPTR: Putative hydrolase; beta-lactamase domain-containing protein 3356239..3357015 Muricauda ruestringensis DSM 13258 11055886 YP_004789478.1 CDS Murru_3035 NC_015945.1 3357333 3357824 D KEGG: fbc:FB2170_12636 putative hydrolase; SPTR: Putative hydrolase; putative hydrolase 3357333..3357824 Muricauda ruestringensis DSM 13258 11055887 YP_004789479.1 CDS Murru_3036 NC_015945.1 3358240 3358899 R PFAM: Phospholipase/Carboxylesterase; COGs: COG0400 esterase; InterPro IPR003140; KEGG: rbi:RB2501_15454 hypothetical protein; PFAM: Phospholipase/carboxylesterase; SPTR: Putative uncharacterized protein; phospholipase/carboxylesterase complement(3358240..3358899) Muricauda ruestringensis DSM 13258 11055888 YP_004789480.1 CDS Murru_3037 NC_015945.1 3358909 3359232 R PFAM: Chloroplast import component protein (Tic20); KEGG: fbc:FB2170_12626 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3358909..3359232) Muricauda ruestringensis DSM 13258 11055889 YP_004789481.1 CDS Murru_3038 NC_015945.1 3359232 3360485 R TIGRFAM: dihydroorotase, multifunctional complex type; COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR006680; KEGG: fbc:FB2170_12621 dihydroorotase; PFAM: Amidohydrolase 1; SPTR: Dihydroorotase; amidohydrolase complement(3359232..3360485) Muricauda ruestringensis DSM 13258 11055890 YP_004789482.1 CDS Murru_3039 NC_015945.1 3360482 3362434 R PFAM: Aerotolerance regulator N-terminal; TIGRFAM: N-terminal double-transmembrane domain; InterPro IPR011933; KEGG: fbc:FB2170_12616 hypothetical protein; PFAM: Double transmembrane domain; SPTR: Putative uncharacterized protein; TIGRFAM: Double transmembrane domain; double-transmembrane region domain-containing protein complement(3360482..3362434) Muricauda ruestringensis DSM 13258 11055891 YP_004789483.1 CDS Murru_3040 NC_015945.1 3362618 3363625 R PFAM: Glycosyl transferase family 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: fbc:FB2170_12611 group 2 family glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, group 2 family protein; family 2 glycosyl transferase complement(3362618..3363625) Muricauda ruestringensis DSM 13258 11055892 YP_004789484.1 CDS Murru_3041 NC_015945.1 3363658 3364053 R KEGG: fbc:FB2170_15568 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3363658..3364053) Muricauda ruestringensis DSM 13258 11055893 YP_004789485.1 CDS Murru_3042 NC_015945.1 3364055 3364750 R PFAM: GDSL-like Lipase/Acylhydrolase; COGs: COG2755 Lysophospholipase L1 and related esterase; InterPro IPR001087; KEGG: rbi:RB2501_15429 putative acylhydrolase; PFAM: Lipase, GDSL; SPTR: Putative acylhydrolase; G-D-S-L family lipolytic protein complement(3364055..3364750) Muricauda ruestringensis DSM 13258 11055894 YP_004789486.1 CDS Murru_3043 NC_015945.1 3364783 3365052 R KEGG: rbi:RB2501_12252 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3364783..3365052) Muricauda ruestringensis DSM 13258 11055895 YP_004789487.1 CDS Murru_3044 NC_015945.1 3365193 3366677 R PFAM: Serine carboxypeptidase; COGs: COG2939 Carboxypeptidase C (cathepsin A); InterPro IPR001563; KEGG: rbi:RB2501_15419 serine carboxypeptidase; PFAM: Peptidase S10, serine carboxypeptidase; SPTR: Serine carboxypeptidase; peptidase S10 serine carboxypeptidase complement(3365193..3366677) Muricauda ruestringensis DSM 13258 11055896 YP_004789488.1 CDS Murru_3045 NC_015945.1 3366820 3367959 D PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: rbi:RB2501_15414 glucose-fructose oxidoreductase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; PRIAM: Glucose-fructose oxidoreductase; SPTR: Glucose-fructose oxidoreductase; glucose-fructose oxidoreductase 3366820..3367959 Muricauda ruestringensis DSM 13258 11055897 YP_004789489.1 CDS Murru_3046 NC_015945.1 3368163 3368708 D PFAM: Mycothiol maleylpyruvate isomerase N-terminal domain; HAMAP: metal-dependent hydrolase; KEGG: rbi:RB2501_11247 metal-dependent hydrolase; SPTR: Putative uncharacterized protein; metal-dependent hydrolase 3368163..3368708 Muricauda ruestringensis DSM 13258 11055898 YP_004789490.1 CDS Murru_3047 NC_015945.1 3368710 3369252 R PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: rbi:RB2501_11252 acetyltransferase (GNAT) family protein; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Acetyltransferase (GNAT) family protein; N-acetyltransferase GCN5 complement(3368710..3369252) Muricauda ruestringensis DSM 13258 11055899 YP_004789491.1 CDS Murru_3048 NC_015945.1 3369267 3369827 R PFAM: AhpC/TSA family; InterPro IPR000866; KEGG: fbc:FB2170_01065 hypothetical protein; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Putative uncharacterized protein; alkyl hydroperoxide reductase complement(3369267..3369827) Muricauda ruestringensis DSM 13258 11055900 YP_004789492.1 CDS Murru_3049 NC_015945.1 3369923 3370294 R PFAM: Protein of unknown function (DUF3276); InterPro IPR006628; KEGG: fbc:FB2170_01040 hypothetical protein; SMART: PUR-alpha/beta/gamma, DNA/RNA-binding; SPTR: Putative uncharacterized protein; PUR-alpha/beta/gamma DNA/RNA-binding protein complement(3369923..3370294) Muricauda ruestringensis DSM 13258 11055901 YP_004789493.1 CDS Murru_3050 NC_015945.1 3370370 3372124 R PFAM: ABC transporter transmembrane region; ABC transporter; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR001140:IPR003439:IPR003593; KEGG: fbc:FB2170_01035 MDR family ABC transporter ATP-binding protein; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein, MDR family; xenobiotic-transporting ATPase complement(3370370..3372124) Muricauda ruestringensis DSM 13258 11055902 YP_004789494.1 CDS Murru_3051 NC_015945.1 3372306 3373253 D PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB; COGs: COG0781 Transcription termination factor; HAMAP: NusB antitermination factor; InterPro IPR011605:IPR006027; KEGG: fbc:FB2170_01030 putative N utilization substance protein; PFAM: NusB/RsmB/TIM44; SPTR: Putative N utilization substance protein; NusB antitermination factor 3372306..3373253 Muricauda ruestringensis DSM 13258 11055903 YP_004789495.1 CDS Murru_3052 NC_015945.1 3373292 3373768 D PFAM: Protein of unknown function (DUF1573); InterPro IPR011467; KEGG: fbc:FB2170_01025 hypothetical protein; PFAM: Protein of unknown function DUF1573; SPTR: Putative uncharacterized protein; hypothetical protein 3373292..3373768 Muricauda ruestringensis DSM 13258 11055904 YP_004789496.1 CDS Murru_3053 NC_015945.1 3373782 3374075 D PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: rbi:RB2501_11307 YajC; PFAM: Preprotein translocase YajC; SPTR: YajC; TIGRFAM: Preprotein translocase YajC; preprotein translocase subunit YajC 3373782..3374075 Muricauda ruestringensis DSM 13258 11055905 YP_004789497.1 CDS Murru_3054 NC_015945.1 3374169 3375515 D PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: fbc:FB2170_01015 putative NADH-dependent dihydrogenase; PFAM: Oxidoreductase, N-terminal; SPTR: Probable NADH-dependent dihydrogenase; oxidoreductase domain-containing protein 3374169..3375515 Muricauda ruestringensis DSM 13258 11055906 YP_004789498.1 CDS Murru_3055 NC_015945.1 3375764 3376528 R PFAM: Protein of unknown function (DUF2400); TIGRFAM: TIGR02757 family protein; InterPro IPR014127; KEGG: fbc:FB2170_10686 hypothetical protein; PFAM: Conserved hypothetical protein CHP02757; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02757; hypothetical protein complement(3375764..3376528) Muricauda ruestringensis DSM 13258 11055907 YP_004789499.1 CDS Murru_3056 NC_015945.1 3376530 3377198 R PFAM: ABC transporter; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: fbc:FB2170_10691 lipoprotein releasing system ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Lipoprotein releasing system ATP-binding protein; phosphonate-transporting ATPase complement(3376530..3377198) Muricauda ruestringensis DSM 13258 11055908 YP_004789500.1 CDS Murru_3057 NC_015945.1 3377485 3378123 D PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; COGs: COG0450 Peroxiredoxin; InterPro IPR000866:IPR019479; KEGG: fbc:FB2170_01075 peroxidase; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Peroxiredoxin, C-terminal; PRIAM: Peroxidase; SPTR: Peroxidase; peroxidase 3377485..3378123 Muricauda ruestringensis DSM 13258 11055909 YP_004789501.1 CDS Murru_3058 NC_015945.1 3378209 3378403 D PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1278 Cold shock protein; InterPro IPR002059:IPR011129; KEGG: fbc:FB2170_01080 cold shock protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold shock protein; cold-shock DNA-binding domain-containing protein 3378209..3378403 Muricauda ruestringensis DSM 13258 11055910 YP_004789502.1 CDS Murru_3059 NC_015945.1 3378951 3379883 R PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; COGs: COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; InterPro IPR002130:IPR001179; KEGG: fbc:FB2170_01095 peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; Peptidyl-prolyl cis-trans isomerase, FKBP-type; PRIAM: Peptidylprolyl isomerase; SPTR: Peptidyl-prolyl cis-trans isomerase; peptidyl-prolyl isomerase complement(3378951..3379883) Muricauda ruestringensis DSM 13258 11055911 YP_004789503.1 CDS Murru_3060 NC_015945.1 3380281 3380841 D PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; COGs: COG0225 Peptide methionine sulfoxide reductase; HAMAP: Peptide methionine sulphoxide reductase MsrA; InterPro IPR002569; KEGG: gfo:GFO_1461 peptide methionine sulfoxide reductase; PFAM: Peptide methionine sulphoxide reductase MsrA; PRIAM: Peptide-methionine (S)-S-oxide reductase; SPTR: Peptide methionine sulfoxide reductase msrA 1; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; peptide methionine sulfoxide reductase MsrA 3380281..3380841 Muricauda ruestringensis DSM 13258 11055912 YP_004789504.1 CDS Murru_3061 NC_015945.1 3380828 3381427 D PFAM: GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; COGs: COG0302 GTP cyclohydrolase I; HAMAP: GTP cyclohydrolase I; InterPro IPR001474:IPR020602; KEGG: rbi:RB2501_15379 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; PRIAM: GTP cyclohydrolase I; SPTR: GTP cyclohydrolase 1 2; TIGRFAM: GTP cyclohydrolase I; GTP cyclohydrolase 1 3380828..3381427 Muricauda ruestringensis DSM 13258 11055913 YP_004789505.1 CDS Murru_3062 NC_015945.1 3381468 3381764 D KEGG: fbc:FB2170_10701 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3381468..3381764 Muricauda ruestringensis DSM 13258 11055914 YP_004789506.1 CDS Murru_3063 NC_015945.1 3381883 3384153 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: zpr:ZPR_2129 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent outer membrane receptor; TonB-dependent receptor plug complement(3381883..3384153) Muricauda ruestringensis DSM 13258 11055915 YP_004789507.1 CDS Murru_3064 NC_015945.1 3384217 3384555 R KEGG: fbc:FB2170_10711 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3384217..3384555) Muricauda ruestringensis DSM 13258 11055916 YP_004789508.1 CDS Murru_3065 NC_015945.1 3384610 3385080 R KEGG: cat:CA2559_08661 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3384610..3385080) Muricauda ruestringensis DSM 13258 11055917 YP_004789509.1 CDS Murru_3066 NC_015945.1 3385159 3385653 R KEGG: fbc:FB2170_10721 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3385159..3385653) Muricauda ruestringensis DSM 13258 11055918 YP_004789510.1 CDS Murru_3067 NC_015945.1 3385685 3386326 R PFAM: Bacterial protein of unknown function (DUF937); KEGG: fbc:FB2170_10726 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein complement(3385685..3386326) Muricauda ruestringensis DSM 13258 11055919 YP_004789511.1 CDS Murru_3068 NC_015945.1 3386403 3387356 R PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: fbc:FB2170_10731 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; PRIAM: Phosphoglycerate dehydrogenase; SPTR: D-3-phosphoglycerate dehydrogenase; phosphoglycerate dehydrogenase complement(3386403..3387356) Muricauda ruestringensis DSM 13258 11055920 YP_004789512.1 CDS Murru_3069 NC_015945.1 3387362 3388426 R PFAM: Aminotransferase class-V; TIGRFAM: phosphoserine aminotransferase; COGs: COG1932 Phosphoserine aminotransferase; HAMAP: Phosphoserine aminotransferase; InterPro IPR022278:IPR000192; KEGG: fbc:FB2170_10736 phosphoserine aminotransferase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Phosphoserine transaminase; SPTR: Phosphoserine aminotransferase; phosphoserine aminotransferase complement(3387362..3388426) Muricauda ruestringensis DSM 13258 11055921 YP_004789513.1 CDS Murru_3070 NC_015945.1 3388498 3389544 R PFAM: Acyl-CoA reductase (LuxC); InterPro IPR008670; KEGG: zpr:ZPR_2136 acyl-CoA reductase; PFAM: Acyl-CoA reductase; SPTR: Acyl-CoA reductase; acyl-CoA reductase complement(3388498..3389544) Muricauda ruestringensis DSM 13258 11055922 YP_004789514.1 CDS Murru_3071 NC_015945.1 3389630 3389983 D InterPro IPR001450; KEGG: rbi:RB2501_15329 3Fe-4S ferredoxin:4Fe-4S ferredoxin; PFAM: 4Fe-4S binding domain; SPTR: 3Fe-4S ferredoxin:4Fe-4S ferredoxin, iron-sulfur binding domain protein; 4Fe-4S ferredoxin 3389630..3389983 Muricauda ruestringensis DSM 13258 11055923 YP_004789515.1 CDS Murru_3072 NC_015945.1 3390218 3391312 D PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; COGs: COG0012 GTPase probable translation factor; InterPro IPR004396:IPR002917:IPR013029; KEGG: fbc:FB2170_10756 GTP-binding protein; PFAM: Domain of unknown function DUF933; GTP-binding protein, HSR1-related; SPTR: GTP-binding protein; TIGRFAM: Conserved hypothetical protein CHP00092; GTP-binding protein YchF 3390218..3391312 Muricauda ruestringensis DSM 13258 11055924 YP_004789516.1 CDS Murru_3073 NC_015945.1 3391380 3392282 D PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: fbc:FB2170_10761 hypothetical protein; PFAM: Drug/metabolite transporter; SPTR: Putative uncharacterized protein; hypothetical protein 3391380..3392282 Muricauda ruestringensis DSM 13258 11055925 YP_004789517.1 CDS Murru_3074 NC_015945.1 3392385 3394253 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterPro IPR003594:IPR013506:IPR006171:IPR001241; KEGG: rbi:RB2501_15314 DNA topoisomerase IV subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, domain 2; ATPase-like, ATP-binding domain; Toprim domain; SMART: DNA topoisomerase, type IIA, subunit B/N-terminal; ATPase-like, ATP-binding domain; SPTR: DNA topoisomerase IV subunit B; DNA topoisomerase type IIA subunit B domain-containing protein 3392385..3394253 Muricauda ruestringensis DSM 13258 11055926 YP_004789518.1 CDS Murru_3075 NC_015945.1 3394269 3396896 D PFAM: DNA gyrase/topoisomerase IV, subunit A; COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR002205; KEGG: fbc:FB2170_10771 DNA topoisomerase IV subunit A; PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit A/C-terminal; SPTR: DNA topoisomerase IV subunit A; DNA topoisomerase 3394269..3396896 Muricauda ruestringensis DSM 13258 11055927 YP_004789519.1 CDS Murru_3076 NC_015945.1 3396960 3397922 D PFAM: Fatty acid hydroxylase superfamily; COGs: COG3000 Sterol desaturase; InterPro IPR006694; KEGG: fbc:FB2170_10781 hypothetical protein; PFAM: Fatty acid hydroxylase; SPTR: Putative uncharacterized protein; fatty acid hydroxylase 3396960..3397922 Muricauda ruestringensis DSM 13258 11055928 YP_004789520.1 CDS Murru_3077 NC_015945.1 3397963 3398340 R KEGG: rbi:RB2501_15294 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3397963..3398340) Muricauda ruestringensis DSM 13258 11055929 YP_004789521.1 CDS Murru_3078 NC_015945.1 3398373 3398780 R PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: fjo:Fjoh_2803 bacteriophage CI repressor; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; helix-turn-helix domain-containing protein complement(3398373..3398780) Muricauda ruestringensis DSM 13258 11055930 YP_004789522.1 CDS Murru_3079 NC_015945.1 3399065 3400168 D PFAM: Zinc carboxypeptidase; InterPro IPR000834; KEGG: fbc:FB2170_10801 hypothetical protein; PFAM: Peptidase M14, carboxypeptidase A; SPTR: Putative uncharacterized protein; peptidase M14 carboxypeptidase A 3399065..3400168 Muricauda ruestringensis DSM 13258 11055931 YP_004789523.1 CDS Murru_3080 NC_015945.1 3400268 3400747 D PFAM: AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019887:IPR019888; KEGG: rbi:RB2501_15279 putative transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; SPTR: Probable transcriptional regulator; AsnC family transcriptional regulator 3400268..3400747 Muricauda ruestringensis DSM 13258 11055932 YP_004789524.1 CDS Murru_3081 NC_015945.1 3400766 3401284 D PFAM: Protein of unknown function (DUF664); KEGG: fbc:FB2170_10811 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3400766..3401284 Muricauda ruestringensis DSM 13258 11055933 YP_004789525.1 CDS Murru_3082 NC_015945.1 3401286 3401612 R KEGG: fbc:FB2170_10816 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3401286..3401612) Muricauda ruestringensis DSM 13258 11055934 YP_004789526.1 CDS Murru_3083 NC_015945.1 3401707 3402762 R PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; COGs: COG0337 3-dehydroquinate synthetase; HAMAP: 3-dehydroquinate synthase AroB, subgroup; InterPro IPR016037:IPR002658; KEGG: fbc:FB2170_10821 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase AroB; PRIAM: 3-dehydroquinate synthase; SPTR: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; 3-dehydroquinate synthase complement(3401707..3402762) Muricauda ruestringensis DSM 13258 11055935 YP_004789527.1 CDS Murru_3084 NC_015945.1 3402854 3404026 D PFAM: Proline dehydrogenase; InterPro IPR002872; KEGG: fbc:FB2170_10826 CpmD protein involved in carbapenem biosynthesis; PFAM: Proline dehydrogenase; SPTR: Proline dehydrogenase; proline dehydrogenase 3402854..3404026 Muricauda ruestringensis DSM 13258 11055936 YP_004789528.1 CDS Murru_3085 NC_015945.1 3404197 3405366 D KEGG: zpr:ZPR_4404 secretion protein HlyD family protein; SPTR: Secretion protein HlyD family protein; secretion protein HlyD family protein 3404197..3405366 Muricauda ruestringensis DSM 13258 11055937 YP_004789529.1 CDS Murru_3086 NC_015945.1 3405368 3407548 D PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family; TIGRFAM: ABC-type bacteriocin transporter; COGs: COG2274 ABC-type bacteriocin/lantibiotic exporter contain an N-terminal double-glycine peptidase domain; InterProIPR005897:IPR005074:IPR001140:IPR003439:IPR 003593; KEGG: zpr:ZPR_4399 probable bacteriocin/lantibiotic ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; Peptidase C39, bacteriocin processing; ABC transporter, transmembrane domain; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Probable bacteriocin/lantibiotic ABC transporter, ATP-binding protein; TIGRFAM: Peptidase C39, ABC-type bacteriocin transporter; bacteriocin ABC transporter 3405368..3407548 Muricauda ruestringensis DSM 13258 11055938 YP_004789530.1 CDS Murru_3087 NC_015945.1 3407560 3407871 D PFAM: HTH domain; KEGG: cpi:Cpin_1491 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3407560..3407871 Muricauda ruestringensis DSM 13258 11055939 YP_004789531.1 CDS Murru_3088 NC_015945.1 3408003 3408170 D hypothetical protein 3408003..3408170 Muricauda ruestringensis DSM 13258 11055940 YP_004789532.1 CDS Murru_3089 NC_015945.1 3408192 3408341 D hypothetical protein 3408192..3408341 Muricauda ruestringensis DSM 13258 11055941 YP_004789533.1 CDS Murru_3090 NC_015945.1 3408630 3408791 D hypothetical protein 3408630..3408791 Muricauda ruestringensis DSM 13258 11055942 YP_004789534.1 CDS Murru_3091 NC_015945.1 3408794 3409054 D hypothetical protein 3408794..3409054 Muricauda ruestringensis DSM 13258 11055943 YP_004789535.1 CDS Murru_3092 NC_015945.1 3409081 3410310 D KEGG: sli:Slin_1146 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3409081..3410310 Muricauda ruestringensis DSM 13258 11055944 YP_004789536.1 CDS Murru_3093 NC_015945.1 3410604 3410813 D hypothetical protein 3410604..3410813 Muricauda ruestringensis DSM 13258 11055945 YP_004789537.1 CDS Murru_3094 NC_015945.1 3410933 3411091 D hypothetical protein 3410933..3411091 Muricauda ruestringensis DSM 13258 11055946 YP_004789538.1 CDS Murru_3095 NC_015945.1 3411106 3411591 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: fba:FIC_01251 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: DNA-binding response regulator, AraC family protein; AraC family transcriptional regulator complement(3411106..3411591) Muricauda ruestringensis DSM 13258 11055947 YP_004789539.1 CDS Murru_3096 NC_015945.1 3411699 3412076 R KEGG: fbc:FB2170_10831 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3411699..3412076) Muricauda ruestringensis DSM 13258 11055948 YP_004789540.1 CDS Murru_3097 NC_015945.1 3412082 3413281 R PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase; COGs: COG0686 Alanine dehydrogenase; InterPro IPR007886:IPR007698; KEGG: fbc:FB2170_10836 alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, N-terminal; Alanine dehydrogenase/PNT, C-terminal; PRIAM: Alanine dehydrogenase; SPTR: Alanine dehydrogenase; Alanine dehydrogenase complement(3412082..3413281) Muricauda ruestringensis DSM 13258 11055949 YP_004789541.1 CDS Murru_3098 NC_015945.1 3413489 3414028 R KEGG: fbc:FB2170_10841 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3413489..3414028) Muricauda ruestringensis DSM 13258 11055950 YP_004789542.1 CDS Murru_3099 NC_015945.1 3414123 3414257 R hypothetical protein complement(3414123..3414257) Muricauda ruestringensis DSM 13258 11055951 YP_004789543.1 CDS Murru_3100 NC_015945.1 3414432 3414848 R PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: fbc:FB2170_10856 hypothetical protein; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; ATPase complement(3414432..3414848) Muricauda ruestringensis DSM 13258 11055952 YP_004789544.1 CDS Murru_3101 NC_015945.1 3414856 3416400 R PFAM: PglZ domain; Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR013973; KEGG: fbc:FB2170_10861 response regulator; PFAM: Signal transduction response regulator, receiver domain; PglZ domain; SMART: Signal transduction response regulator, receiver domain; SPTR: Response regulator; response regulator receiver protein complement(3414856..3416400) Muricauda ruestringensis DSM 13258 11055953 YP_004789545.1 CDS Murru_3102 NC_015945.1 3416438 3417661 D PFAM: HD domain; COGs: COG1078 HD superfamily phosphohydrolase; InterPro IPR006674:IPR003607; KEGG: gfo:GFO_1777 metal-dependent phosphohydrolase family protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain; SPTR: Metal-dependent phosphohydrolase family protein; metal dependent phosphohydrolase 3416438..3417661 Muricauda ruestringensis DSM 13258 11055954 YP_004789546.1 CDS Murru_3103 NC_015945.1 3417685 3418719 D PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); HAMAP: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; InterPro IPR007691:IPR020573:IPR001451; KEGG: fbc:FB2170_10871 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat; SPTR: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 3417685..3418719 Muricauda ruestringensis DSM 13258 11055955 YP_004789547.1 CDS Murru_3104 NC_015945.1 3418703 3420115 D PFAM: FabA-like domain; UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ; COGs: COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; HAMAP: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; InterPro IPR010084:IPR004463:IPR013114; KEGG: rbi:RB2501_15199 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; PFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; SPTR: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; UDP-3-O-acyl N-acetylglucosamine deacetylase; (3R)-hydroxymyristoyl-ACP dehydratase 3418703..3420115 Muricauda ruestringensis DSM 13258 11055956 YP_004789548.1 CDS Murru_3105 NC_015945.1 3420116 3420901 D PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; COGs: COG1043 Acyl-(acyl carrier protein); InterPro IPR010137:IPR001451; KEGG: fbc:FB2170_10881 UDP-N-acetylglucosamine acyltransferase; PFAM: Bacterial transferase hexapeptide repeat; PRIAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgluc osamineO-acyltransferase; SPTR: UDP-N-acetylglucosamine acyltransferase; TIGRFAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgl ucosamineO-acyltransferase; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 3420116..3420901 Muricauda ruestringensis DSM 13258 11055957 YP_004789549.1 CDS Murru_3106 NC_015945.1 3420906 3421472 D PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); HAMAP: Translation elongation factor P; InterPro IPR011768:IPR013185:IPR001059:IPR015365; KEGG: fbc:FB2170_10886 elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central; SMART: Elongation factor P, C-terminal; SPTR: Elongation factor P; TIGRFAM: Translation elongation factor P; elongation factor P 3420906..3421472 Muricauda ruestringensis DSM 13258 11055958 YP_004789550.1 CDS Murru_3107 NC_015945.1 3421478 3422413 D PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD; Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); InterPro IPR007691:IPR020573:IPR001451; KEGG: fjo:Fjoh_2900 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat; SPTR: UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 3421478..3422413 Muricauda ruestringensis DSM 13258 11055959 YP_004789551.1 CDS Murru_3108 NC_015945.1 3422474 3423346 D PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit; COGs: COG0074 Succinyl-CoA synthetase alpha subunit; InterPro IPR005810:IPR003781:IPR005811; KEGG: fbc:FB2170_10896 succinyl-CoA synthetase subunit alpha; PFAM: CoA-binding; ATP-citrate lyase/succinyl-CoA ligase; PRIAM: Succinate--CoA ligase (ADP-forming); SMART: CoA-binding; SPTR: Succinyl-CoA ligase [ADP-forming] subunit alpha; TIGRFAM: Succinyl-CoA ligase, alpha subunit; succinyl-CoA synthetase subunit alpha 3422474..3423346 Muricauda ruestringensis DSM 13258 11055960 YP_004789552.1 CDS Murru_3109 NC_015945.1 3423644 3424393 D PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR011284:IPR002198:IPR020842; KEGG: fbc:FB2170_10901 putative 3-oxoacyl-[acyl-carrier protein] reductase; PFAM: Short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR; SPTR: Putative 3-oxoacyl-[acyl-carrier protein] reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; 3-oxoacyl-ACP reductase 3423644..3424393 Muricauda ruestringensis DSM 13258 11055961 YP_004789553.1 CDS Murru_3110 NC_015945.1 3424399 3426432 D KEGG: fbc:FB2170_10906 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3424399..3426432 Muricauda ruestringensis DSM 13258 11055962 YP_004789554.1 CDS Murru_3111 NC_015945.1 3426445 3427260 D PFAM: SPFH domain / Band 7 family; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107; KEGG: rbi:RB2501_15164 membrane protease subunit stomatin/prohibitin-like protein; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: Membrane protease subunit stomatin/prohibitin-like protein; hypothetical protein 3426445..3427260 Muricauda ruestringensis DSM 13258 11055963 YP_004789555.1 CDS Murru_3112 NC_015945.1 3427461 3428318 D PFAM: HisG, C-terminal domain; ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, C-terminal domain; ATP phosphoribosyltransferase; COGs: COG0040 ATP phosphoribosyltransferase; HAMAP: Histidine biosynthesis HisG, ATP phosphoribosyltransferase, subgroup; InterPro IPR020621:IPR013820:IPR013115; KEGG: fbc:FB2170_10916 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase, catalytic domain; Histidine biosynthesis HisG, C-terminal; PRIAM: ATP phosphoribosyltransferase; SPTR: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, catalytic domain; Histidine biosynthesis HisG, C-terminal; ATP phosphoribosyltransferase 3427461..3428318 Muricauda ruestringensis DSM 13258 11055964 YP_004789556.1 CDS Murru_3113 NC_015945.1 3428318 3429601 D PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; COGs: COG0141 Histidinol dehydrogenase; HAMAP: Histidinol dehydrogenase, prokaryotic-type; InterPro IPR012131; KEGG: cat:CA2559_09011 putative histidinol dehydrogenase; PFAM: Histidinol dehydrogenase, prokaryotic-type; PRIAM: Histidinol dehydrogenase; SPTR: Histidinol dehydrogenase; TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; histidinol dehydrogenase 3428318..3429601 Muricauda ruestringensis DSM 13258 11055965 YP_004789557.1 CDS Murru_3114 NC_015945.1 3429601 3430644 D PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; HAMAP: Histidinol-phosphate aminotransferase; InterPro IPR005861:IPR004839; KEGG: fbc:FB2170_10926 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/classII; PRIAM: Histidinol-phosphate transaminase; SPTR: Histidinol-phosphate aminotransferase; TIGRFAM: Histidinol-phosphate aminotransferase; histidinol-phosphate aminotransferase 3429601..3430644 Muricauda ruestringensis DSM 13258 11055966 YP_004789558.1 CDS Murru_3115 NC_015945.1 3430647 3431783 D PFAM: Imidazoleglycerol-phosphate dehydratase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; histidinol-phosphate phosphatase family domain; histidinol-phosphatase; COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; HAMAP: Imidazoleglycerol-phosphate dehydratase; InterPro IPR000807:IPR005954:IPR006543:IPR013954; KEGG: fbc:FB2170_10931 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; PFAM: Imidazoleglycerol-phosphate dehydratase; Polynucleotide kinase 3 phosphatase, central region; PRIAM: Histidinol-phosphatase; SPTR: Imidazole glycerol-phosphate dehydratase/histidinol phosphatase; TIGRFAM: Histidinol-phosphatase; Histidinol-phosphate phosphatase; imidazoleglycerol-phosphate dehydratase 3430647..3431783 Muricauda ruestringensis DSM 13258 11055967 YP_004789559.1 CDS Murru_3116 NC_015945.1 3431864 3432448 D PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; COGs: COG0118 Glutamine amidotransferase; HAMAP: Imidazole glycerol phosphate synthase, subunit H; InterPro IPR010139:IPR000991; KEGG: fbc:FB2170_10936 imidazole glycerol phosphate synthase subunit; PFAM: Glutamine amidotransferase class-I, C-terminal; SPTR: Imidazole glycerol phosphate synthase subunit; TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; imidazole glycerol phosphate synthase subunit HisH 3431864..3432448 Muricauda ruestringensis DSM 13258 11055968 YP_004789560.1 CDS Murru_3117 NC_015945.1 3432450 3432866 D PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: fbc:FB2170_10941 acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Acetyltransferase; N-acetyltransferase GCN5 3432450..3432866 Muricauda ruestringensis DSM 13258 11055969 YP_004789561.1 CDS Murru_3118 NC_015945.1 3432870 3433598 D PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; HAMAP: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; InterPro IPR023016:IPR006063:IPR006062; KEGG: zpr:ZPR_2392 phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide(ProFAR) isomerase; PFAM: Histidine biosynthesis; PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase; SPTR:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 3432870..3433598 Muricauda ruestringensis DSM 13258 11055970 YP_004789562.1 CDS Murru_3119 NC_015945.1 3433591 3434115 D PFAM: Protein of unknown function (DUF1572); KEGG: rbi:RB2501_15129 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3433591..3434115 Muricauda ruestringensis DSM 13258 11055971 YP_004789563.1 CDS Murru_3120 NC_015945.1 3434326 3435081 D PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; COGs: COG0107 Imidazoleglycerol-phosphate synthase; HAMAP: Histidine biosynthesis, HisF; InterPro IPR004651:IPR006062; KEGG: fjo:Fjoh_2872 imidazole glycerol phosphate synthase subunit HisF; PFAM: Histidine biosynthesis; PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase; SPTR: Imidazole glycerol phosphate synthase subunit hisF; TIGRFAM: Histidine biosynthesis, HisF; imidazole glycerol phosphate synthase subunit HisF 3434326..3435081 Muricauda ruestringensis DSM 13258 11055972 YP_004789564.1 CDS Murru_3121 NC_015945.1 3435155 3435751 D PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; Phosphoribosyl-AMP cyclohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; HAMAP: Phosphoribosyl-ATP pyrophosphohydrolase; Histidine biosynthesis bifunctional protein HisIE; InterPro IPR023019:IPR008179:IPR002496:IPR021130; KEGG: gfo:GFO_1757 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein; PFAM: Phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphohydrolase-like; SPTR: Histidine biosynthesis bifunctional protein HisIE; TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; phosphoribosyl-ATP pyrophosphatase 3435155..3435751 Muricauda ruestringensis DSM 13258 11055973 YP_004789565.1 CDS Murru_3122 NC_015945.1 3435815 3436978 D COGs: COG4867 Uncharacterized protein with a von Willebrand factor type A (vWA) domain; KEGG: fbc:FB2170_11141 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3435815..3436978 Muricauda ruestringensis DSM 13258 11055974 YP_004789566.1 CDS Murru_3123 NC_015945.1 3436987 3438456 D COGs: COG1239 Mg-chelatase subunit ChlI; KEGG: fbc:FB2170_11151 magnesium chelatase subunit ChlI family protein; SPTR: Magnesium chelatase, subunit ChlI family protein; magnesium chelatase subunit ChlI family protein 3436987..3438456 Muricauda ruestringensis DSM 13258 11055975 YP_004789567.1 CDS Murru_3124 NC_015945.1 3438457 3438969 R KEGG: fbc:FB2170_11176 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3438457..3438969) Muricauda ruestringensis DSM 13258 11055976 YP_004789568.1 CDS Murru_3125 NC_015945.1 3439088 3439972 R PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthases; cysteine synthase B; COGs: COG0031 Cysteine synthase; InterPro IPR005858:IPR005856:IPR001926; KEGG: fbc:FB2170_11201 cysteine synthase B; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Cysteine synthase; SPTR: Cysteine synthase; TIGRFAM: Cysteine synthase K/M; Cysteine synthase B; cysteine synthase complement(3439088..3439972) Muricauda ruestringensis DSM 13258 11055977 YP_004789569.1 CDS Murru_3126 NC_015945.1 3439965 3440756 R TIGRFAM: serine O-acetyltransferase; COGs: COG1045 Serine acetyltransferase; InterPro IPR001451; KEGG: fbc:FB2170_11206 hypothetical protein; PRIAM: Serine O-acetyltransferase; SPTR: Putative uncharacterized protein; Serine O-acetyltransferase complement(3439965..3440756) Muricauda ruestringensis DSM 13258 11055978 YP_004789570.1 CDS Murru_3127 NC_015945.1 3440848 3441528 D PFAM: Conserved hypothetical protein (DUF2461); TIGRFAM: TIGR02453 family protein; COGs: COG5587 conserved hypothetical protein; InterPro IPR012808; KEGG: fbc:FB2170_11211 hypothetical protein; PFAM: Conserved hypothetical protein CHP02453; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02453; hypothetical protein 3440848..3441528 Muricauda ruestringensis DSM 13258 11055979 YP_004789571.1 CDS Murru_3128 NC_015945.1 3441517 3441930 R KEGG: rbi:RB2501_15064 glyoxalase family protein; SPTR: Glyoxalase family protein; glyoxalase complement(3441517..3441930) Muricauda ruestringensis DSM 13258 11055980 YP_004789572.1 CDS Murru_3129 NC_015945.1 3441958 3442116 D hypothetical protein 3441958..3442116 Muricauda ruestringensis DSM 13258 11055981 YP_004789573.1 CDS Murru_3130 NC_015945.1 3442274 3442495 D KEGG: gfo:GFO_1133 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3442274..3442495 Muricauda ruestringensis DSM 13258 11055982 YP_004789574.1 CDS Murru_3131 NC_015945.1 3442498 3442800 D PFAM: Plasmid stabilisation system protein; InterPro IPR007712; KEGG: cch:Cag_1051 hypothetical protein; PFAM: Plasmid stabilisation system; SPTR: Putative uncharacterized protein; plasmid stabilization system 3442498..3442800 Muricauda ruestringensis DSM 13258 11055983 YP_004789575.1 CDS Murru_3132 NC_015945.1 3442843 3443742 D PFAM: Protein of unknown function DUF72; COGs: COG1801 conserved hypothetical protein; InterPro IPR002763; KEGG: fbc:FB2170_11221 hypothetical protein; PFAM: Protein of unknown function DUF72; SPTR: Putative uncharacterized protein; hypothetical protein 3442843..3443742 Muricauda ruestringensis DSM 13258 11055984 YP_004789576.1 CDS Murru_3133 NC_015945.1 3444106 3444525 D PFAM: Thioesterase superfamily; COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: rbi:RB2501_15054 4-hydroxybenzoyl-CoA thioesterase domain-containing protein; PFAM: Thioesterase superfamily; SPTR: 4-hydroxybenzoyl-CoA thioesterase domain protein; thioesterase superfamily protein 3444106..3444525 Muricauda ruestringensis DSM 13258 11055985 YP_004789577.1 CDS Murru_3134 NC_015945.1 3444522 3445805 R PFAM: Membrane dipeptidase (Peptidase family M19); COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR008257; KEGG: rbi:RB2501_15049 dipeptidase; PFAM: Peptidase M19, renal dipeptidase; PRIAM: Membrane dipeptidase; SPTR: Dipeptidase; membrane dipeptidase complement(3444522..3445805) Muricauda ruestringensis DSM 13258 11055986 YP_004789578.1 CDS Murru_3135 NC_015945.1 3445934 3446716 D KEGG: fbc:FB2170_11231 two-component system sensory/regulatory protein; SPTR: Two-component system sensory/regulatory protein (Hybrid family); hypothetical protein 3445934..3446716 Muricauda ruestringensis DSM 13258 11055987 YP_004789579.1 CDS Murru_3136 NC_015945.1 3446729 3447082 D hypothetical protein 3446729..3447082 Muricauda ruestringensis DSM 13258 11055988 YP_004789580.1 CDS Murru_3137 NC_015945.1 3447171 3447269 D KEGG: rbi:RB2501_15014 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3447171..3447269 Muricauda ruestringensis DSM 13258 11055989 YP_004789581.1 CDS Murru_3138 NC_015945.1 3447241 3447399 D hypothetical protein 3447241..3447399 Muricauda ruestringensis DSM 13258 11055990 YP_004789582.1 CDS Murru_3139 NC_015945.1 3447645 3448508 R PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR014284:IPR009042:IPR007627:IPR007624:IPR 007630; KEGG: rbi:RB2501_15004 putative sigma factor A; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 3; SPTR: Putative sigma factor A; TIGRFAM: RNA polymerase sigma-70; RpoD subfamily RNA polymerase sigma-70 subunit complement(3447645..3448508) Muricauda ruestringensis DSM 13258 11055991 YP_004789583.1 CDS Murru_3140 NC_015945.1 3448753 3450264 D PFAM: Helicase conserved C-terminal domain; Type III restriction enzyme, res subunit; COGs: COG1061 DNA or RNA helicase of superfamily II; InterPro IPR006935:IPR001650:IPR014001; KEGG: fbc:FB2170_11286 hypothetical protein; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: Putative uncharacterized protein; type III restriction protein res subunit 3448753..3450264 Muricauda ruestringensis DSM 13258 11055992 YP_004789584.1 CDS Murru_3141 NC_015945.1 3450673 3451899 D KEGG: fbc:FB2170_11291 putative glycosyltransferase; SPTR: Putative glycosyltransferase; putative glycosyltransferase 3450673..3451899 Muricauda ruestringensis DSM 13258 11055993 YP_004789585.1 CDS Murru_3142 NC_015945.1 3452399 3454570 R PFAM: MutS domain V; COGs: COG1193 Mismatch repair ATPase (MutS family); InterPro IPR000432:IPR007696; KEGG: fbc:FB2170_11946 putative DNA mismatch repair MutS protein; PFAM: DNA mismatch repair protein MutS, C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; SPTR: Putative DNA mismatch repair MutS protein; DNA mismatch repair protein MutS domain-containing protein complement(3452399..3454570) Muricauda ruestringensis DSM 13258 11055994 YP_004789586.1 CDS Murru_3143 NC_015945.1 3454808 3455473 D PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase; COGs: COG0692 Uracil DNA glycosylase; HAMAP: Uracil-DNA glycosylase; InterPro IPR002043:IPR005122; KEGG: fbc:FB2170_11911 uracil-DNA glycosylase; PFAM: Uracil-DNA glycosylase-like; SPTR: Uracil-DNA glycosylase; TIGRFAM: Uracil-DNA glycosylase; uracil-DNA glycosylase 3454808..3455473 Muricauda ruestringensis DSM 13258 11055995 YP_004789587.1 CDS Murru_3144 NC_015945.1 3455484 3456332 R PFAM: NMT1/THI5 like; COGs: COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components; KEGG: fbc:FB2170_11906 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3455484..3456332) Muricauda ruestringensis DSM 13258 11055996 YP_004789588.1 CDS Murru_3145 NC_015945.1 3456404 3457291 R PFAM: Phosphorylase superfamily; COGs: COG2820 Uridine phosphorylase; InterPro IPR000845; KEGG: fbc:FB2170_11901 phosphorylase family protein; PFAM: Nucleoside phosphorylase domain; SPTR: Purine nucleoside phosphorylase II; purine or other phosphorylase family 1 complement(3456404..3457291) Muricauda ruestringensis DSM 13258 11055997 YP_004789589.1 CDS Murru_3146 NC_015945.1 3457295 3458227 R KEGG: fbc:FB2170_11896 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3457295..3458227) Muricauda ruestringensis DSM 13258 11055998 YP_004789590.1 CDS Murru_3147 NC_015945.1 3458372 3458701 R PFAM: Translation initiation factor SUI1; TIGRFAM: translation initation factor SUI1, putative, prokaryotic; COGs: COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related protein; InterPro IPR001950; KEGG: fbc:FB2170_11891 putative translation initiation factor SUI1; PFAM: Translation initiation factor SUI1; SPTR: Putative translation initiation factor SUI1; translation initiation factor SUI1 complement(3458372..3458701) Muricauda ruestringensis DSM 13258 11055999 YP_004789591.1 CDS Murru_3148 NC_015945.1 3458866 3459816 R PFAM: 2OG-Fe(II) oxygenase superfamily; COGs: COG3491 Isopenicillin N synthase and related dioxygenase; InterPro IPR005123; KEGG: fbc:FB2170_11886 oxidoreductase; PFAM: Oxoglutarate/iron-dependent oxygenase; SPTR: Oxidoreductase; 2OG-Fe(II) oxygenase complement(3458866..3459816) Muricauda ruestringensis DSM 13258 11056000 YP_004789592.1 CDS Murru_3149 NC_015945.1 3459927 3461906 D PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR001017:IPR005475:IPR005476; KEGG: cat:CA2559_10943 putative oxidoreductase; PFAM: Dehydrogenase, E1 component; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)., Pyruvate dehydrogenase (acetyl-transferring); SMART: Transketolase-like, pyrimidine-binding domain; SPTR: 2-oxoisovalerate dehydrogenase, E1 component, alpha and beta fusion; 2-oxoisovalerate dehydrogenase, E1 subunit 3459927..3461906 Muricauda ruestringensis DSM 13258 11056001 YP_004789593.1 CDS Murru_3150 NC_015945.1 3461994 3462479 D KEGG: fbc:FB2170_11876 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3461994..3462479 Muricauda ruestringensis DSM 13258 11056002 YP_004789594.1 CDS Murru_3151 NC_015945.1 3462484 3463176 D PFAM: OmpA family; COGs: COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)protein; InterPro IPR008816:IPR006665; KEGG: fbc:FB2170_11871 OmpA family protein; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Rickettsia 17kDa surface antigen; SPTR: OmpA family protein; OmpA/MotB domain-containing protein 3462484..3463176 Muricauda ruestringensis DSM 13258 11056003 YP_004789595.1 CDS Murru_3152 NC_015945.1 3463337 3463669 D hypothetical protein 3463337..3463669 Muricauda ruestringensis DSM 13258 11056004 YP_004789596.1 CDS Murru_3153 NC_015945.1 3463767 3464684 D PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: fbc:FB2170_11591 hypothetical protein; PFAM: Drug/metabolite transporter; SPTR: Putative uncharacterized protein; hypothetical protein 3463767..3464684 Muricauda ruestringensis DSM 13258 11056005 YP_004789597.1 CDS Murru_3154 NC_015945.1 3464753 3465307 D KEGG: zpr:ZPR_2689 secreted protein; SPTR: Putative uncharacterized protein; hypothetical protein 3464753..3465307 Muricauda ruestringensis DSM 13258 11056006 YP_004789598.1 CDS Murru_3155 NC_015945.1 3465684 3466886 D COGs: COG2133 Glucose/sorbosone dehydrogenase; KEGG: rbi:RB2501_14849 L-sorbosone dehydrogenase; SPTR: L-sorbosone dehydrogenase; L-sorbosone dehydrogenase 3465684..3466886 Muricauda ruestringensis DSM 13258 11056007 YP_004789599.1 CDS Murru_3157 NC_015945.1 3467086 3467805 R PFAM: Phage protein Gp37/Gp68; COGs: COG4422 Bacteriophage protein gp37; InterPro IPR011101; KEGG: chu:CHU_3680 ABC transporter; PFAM: Phage Gp37Gp68; SPTR: Putative uncharacterized protein; manually curated; Gp37Gp68 family protein complement(3467086..3467805) Muricauda ruestringensis DSM 13258 11056009 YP_004789600.1 CDS Murru_3158 NC_015945.1 3467808 3468902 R KEGG: chu:CHU_3679 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3467808..3468902) Muricauda ruestringensis DSM 13258 11056010 YP_004789601.1 CDS Murru_3159 NC_015945.1 3468974 3469750 R TIGRFAM: probable DNA metabolism protein; KEGG: gfo:GFO_0357 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3468974..3469750) Muricauda ruestringensis DSM 13258 11056011 YP_004789602.1 CDS Murru_3160 NC_015945.1 3470025 3470783 D PFAM: Helix-turn-helix; Peptidase S24-like; InterPro IPR001387:IPR019759; KEGG: fbc:FB2170_12111 transcriptional regulator; PFAM: Helix-turn-helix type 3; Peptidase S24/S26A/S26B, conserved region; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, putative; helix-turn-helix domain-containing protein 3470025..3470783 Muricauda ruestringensis DSM 13258 11056012 YP_004789603.1 CDS Murru_3161 NC_015945.1 3470785 3471780 R PFAM: SMP-30/Gluconolaconase/LRE-like region; COGs: COG3386 Gluconolactonase; InterPro IPR013658; KEGG: dfe:Dfer_2426 gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE-like region; PRIAM: Gluconolactonase; SPTR: Gluconolactonase; gluconolactonase complement(3470785..3471780) Muricauda ruestringensis DSM 13258 11056013 YP_004789604.1 CDS Murru_3162 NC_015945.1 3471829 3472749 R PFAM: Prokaryotic glutathione synthetase, ATP-grasp domain; KEGG: lpp:lpp1627 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3471829..3472749) Muricauda ruestringensis DSM 13258 11056014 YP_004789605.1 CDS Murru_3163 NC_015945.1 3472761 3474443 R PFAM: Gamma-glutamyltranspeptidase; TIGRFAM: gamma-glutamyltranspeptidase; COGs: COG0405 Gamma-glutamyltransferase; InterPro IPR000101; KEGG: rbi:RB2501_14579 gamma-glutamyltranspeptidase; PFAM: Gamma-glutamyltranspeptidase; PRIAM: Gamma-glutamyltransferase; SPTR: Gamma-glutamyltranspeptidase; TIGRFAM: Gamma-glutamyltranspeptidase; gamma-glutamyltransferase complement(3472761..3474443) Muricauda ruestringensis DSM 13258 11056015 YP_004789606.1 CDS Murru_3164 NC_015945.1 3474431 3475024 R PFAM: Protein of unknown function, DUF479; COGs: COG3124 conserved hypothetical protein; InterPro IPR007431; KEGG: fbc:FB2170_12051 hypothetical protein; PFAM: Acyl carrier protein phosphodiesterase; SPTR: Putative uncharacterized protein; acyl carrier protein phosphodiesterase complement(3474431..3475024) Muricauda ruestringensis DSM 13258 11056016 YP_004789607.1 CDS Murru_3165 NC_015945.1 3475116 3476504 D PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase; COGs: COG1109 Phosphomannomutase; InterPro IPR005844:IPR005845:IPR005846:IPR005843; KEGG: rbi:RB2501_14589 phosphoglucomutase/phosphomannomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; PRIAM: Phosphoglucosamine mutase; SPTR: Phosphomannomutase; phosphoglucosamine mutase 3475116..3476504 Muricauda ruestringensis DSM 13258 11056017 YP_004789608.1 CDS Murru_3166 NC_015945.1 3476501 3477418 R PFAM: Bacterial lipid A biosynthesis acyltransferase; COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: rbi:RB2501_14594 putative LipD A biosynthesis related exported protein; PFAM: Bacterial lipid A biosynthesis acyltransferase; SPTR: Putative lipd A biosynthesis related exported protein; lipid A biosynthesis acyltransferase complement(3476501..3477418) Muricauda ruestringensis DSM 13258 11056018 YP_004789609.1 CDS Murru_3167 NC_015945.1 3477472 3478122 D PFAM: Rhomboid family; COGs: COG0705 membrane protein; InterPro IPR022764; KEGG: fbc:FB2170_12031 hypothetical protein; PFAM: Peptidase S54, rhomboid domain; SPTR: Putative uncharacterized protein; peptidase S54, rhomboid domain-containing protein 3477472..3478122 Muricauda ruestringensis DSM 13258 11056019 YP_004789610.1 CDS Murru_3168 NC_015945.1 3478600 3479721 R PFAM: AhpC/TSA family; InterPro IPR000866; KEGG: rbi:RB2501_14609 putative lipoprotein/thioderoxin; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Putative lipoprotein/thioderoxin; alkyl hydroperoxide reductase complement(3478600..3479721) Muricauda ruestringensis DSM 13258 11056020 YP_004789611.1 CDS Murru_3169 NC_015945.1 3479821 3480321 R KEGG: rbi:RB2501_14614 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3479821..3480321) Muricauda ruestringensis DSM 13258 11056021 YP_004789612.1 CDS Murru_3170 NC_015945.1 3480411 3483326 D PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; COGs: COG0247 Fe-S oxidoreductase; InterPro IPR006094:IPR004113; KEGG: fbc:FB2170_12011 FAD linked oxidase-like protein; PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; PRIAM: D-lactate dehydrogenase (cytochrome); SPTR: FAD linked oxidase-like protein; D-lactate dehydrogenase 3480411..3483326 Muricauda ruestringensis DSM 13258 11056022 YP_004789613.1 CDS Murru_3171 NC_015945.1 3483297 3484217 R COGs: COG2908 conserved hypothetical protein; InterPro IPR004843; KEGG: fjo:Fjoh_4577 metallophosphoesterase; PFAM: Metallo-dependent phosphatase; SPTR: Fused predicted transporter subunit of ABC superfamily: ATP-binding component; metallophosphoesterase complement(3483297..3484217) Muricauda ruestringensis DSM 13258 11056023 YP_004789614.1 CDS Murru_3172 NC_015945.1 3484572 3485636 D PFAM: Chorismate synthase; TIGRFAM: chorismate synthase; COGs: COG0082 Chorismate synthase; InterPro IPR000453; KEGG: fbc:FB2170_12006 chorismate synthase; PFAM: Chorismate synthase; PRIAM: Chorismate synthase; SPTR: Chorismate synthase; TIGRFAM: Chorismate synthase; chorismate synthase 3484572..3485636 Muricauda ruestringensis DSM 13258 11056024 YP_004789615.1 CDS Murru_3173 NC_015945.1 3485694 3487019 D PFAM: Sodium:dicarboxylate symporter family; COGs: COG1301 Na+/H+-dicarboxylate symporter; InterPro IPR001991; KEGG: rbi:RB2501_14634 proton/glutamate symporter; PFAM: Sodium:dicarboxylate symporter; SPTR: Proton/glutamate symporter; sodium:dicarboxylate symporter 3485694..3487019 Muricauda ruestringensis DSM 13258 11056025 YP_004789616.1 CDS Murru_3174 NC_015945.1 3487184 3489235 R PFAM: TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; conserved hypothetical protein; InterPro IPR011935:IPR012910; KEGG: fbc:FB2170_11971 putative TonB-linked outer membrane protein; PFAM: TonB-dependent receptor, plug; SPTR: Putative TonB-linked outer membrane protein; TIGRFAM: Conserved hypothetical protein CHP02231; hypothetical protein complement(3487184..3489235) Muricauda ruestringensis DSM 13258 11056026 YP_004789617.1 CDS Murru_3175 NC_015945.1 3489347 3489760 R PFAM: Protein of unknown function, DUF393; COGs: COG3011 conserved hypothetical protein; InterPro IPR007263; KEGG: gfo:GFO_1625 hypothetical protein; PFAM: Putative thiol-disulphide oxidoreductase DCC; SPTR: Protein containing DUF393; thiol-disulfide oxidoreductase DCC complement(3489347..3489760) Muricauda ruestringensis DSM 13258 11056027 YP_004789618.1 CDS Murru_3176 NC_015945.1 3489770 3490054 R PFAM: Acetyltransferase (GNAT) family; COGs: COG2388 acetyltransferase; KEGG: gfo:GFO_1141 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3489770..3490054) Muricauda ruestringensis DSM 13258 11056028 YP_004789619.1 CDS Murru_3177 NC_015945.1 3490061 3490267 R PFAM: Protein of unknown function (DUF1271); InterPro IPR010693; KEGG: bfr:BF1560 hypothetical protein; PFAM: Ferredoxin soy-like; SPTR: Putative uncharacterized protein; hypothetical protein complement(3490061..3490267) Muricauda ruestringensis DSM 13258 11056029 YP_004789620.1 CDS Murru_3178 NC_015945.1 3490357 3491226 R KEGG: mtt:Ftrac_1334 hypothetical protein; SPTR: TPR repeat-containing protein; hypothetical protein complement(3490357..3491226) Muricauda ruestringensis DSM 13258 11056030 YP_004789621.1 CDS Murru_3179 NC_015945.1 3491223 3491735 R KEGG: mtt:Ftrac_1335 hypothetical protein; hypothetical protein complement(3491223..3491735) Muricauda ruestringensis DSM 13258 11056031 YP_004789622.1 CDS Murru_3180 NC_015945.1 3492125 3493582 R PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR006311:IPR000683; KEGG: rbi:RB2501_09095 putative dehydrogenase-like protein; PFAM: Oxidoreductase, N-terminal; SPTR: Putative dehydrogenase-like protein; oxidoreductase domain-containing protein complement(3492125..3493582) Muricauda ruestringensis DSM 13258 11056032 YP_004789623.1 CDS Murru_3181 NC_015945.1 3493944 3494609 R SPTR: Putative uncharacterized protein; hypothetical protein complement(3493944..3494609) Muricauda ruestringensis DSM 13258 11056033 YP_004789624.1 CDS Murru_3182 NC_015945.1 3494934 3495203 D hypothetical protein 3494934..3495203 Muricauda ruestringensis DSM 13258 11056034 YP_004789625.1 CDS Murru_3183 NC_015945.1 3495329 3495967 R PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: fbc:FB2170_11456 transcriptional regulator; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulatory protein; GntR family transcriptional regulator complement(3495329..3495967) Muricauda ruestringensis DSM 13258 11056035 YP_004789626.1 CDS Murru_3184 NC_015945.1 3496019 3496495 R KEGG: rbi:RB2501_10637 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3496019..3496495) Muricauda ruestringensis DSM 13258 11056036 YP_004789627.1 CDS Murru_3185 NC_015945.1 3496681 3497469 D KEGG: rbi:RB2501_14899 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3496681..3497469 Muricauda ruestringensis DSM 13258 11056037 YP_004789628.1 CDS Murru_3186 NC_015945.1 3497702 3499072 D PFAM: Aldehyde dehydrogenase family; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: fbc:FB2170_12341 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; SPTR: Aldehyde dehydrogenase; aldehyde dehydrogenase 3497702..3499072 Muricauda ruestringensis DSM 13258 11056038 YP_004789629.1 CDS Murru_3187 NC_015945.1 3499170 3500024 D PFAM: Universal stress protein family; SPTR: Putative uncharacterized protein; hypothetical protein 3499170..3500024 Muricauda ruestringensis DSM 13258 11056039 YP_004789630.1 CDS Murru_3188 NC_015945.1 3500283 3502043 R SPTR: Putative uncharacterized protein; hypothetical protein complement(3500283..3502043) Muricauda ruestringensis DSM 13258 11056040 YP_004789631.1 CDS Murru_3189 NC_015945.1 3502057 3503787 R KEGG: cyc:PCC7424_4176 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3502057..3503787) Muricauda ruestringensis DSM 13258 11056041 YP_004789632.1 CDS Murru_3190 NC_015945.1 3504022 3504231 R PFAM: Helix-turn-helix; InterPro IPR001387; KEGG: chu:CHU_2935 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; helix-turn-helix domain-containing protein complement(3504022..3504231) Muricauda ruestringensis DSM 13258 11056042 YP_004789633.1 CDS Murru_3191 NC_015945.1 3504423 3504650 D hypothetical protein 3504423..3504650 Muricauda ruestringensis DSM 13258 11056043 YP_004789634.1 CDS Murru_3192 NC_015945.1 3504795 3505223 R PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; COGs: COG1047 FKBP-type peptidyl-prolyl cis-trans isomerase 2; InterPro IPR001179; KEGG: cat:CA2559_12583 peptidyl-prolyl cis-trans isomerase, FKBP-type; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; FKBP-type peptidylprolyl isomerase complement(3504795..3505223) Muricauda ruestringensis DSM 13258 11056044 YP_004789635.1 CDS Murru_3193 NC_015945.1 3505349 3506506 R PFAM: Endonuclease/Exonuclease/phosphatase family; InterPro IPR005135; KEGG: mmr:Mmar10_0829 endonuclease/exonuclease/phosphatase; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Endonuclease/exonuclease/phosphatase; endonuclease/exonuclease/phosphatase complement(3505349..3506506) Muricauda ruestringensis DSM 13258 11056045 YP_004789636.1 CDS Murru_3194 NC_015945.1 3506902 3509514 D PFAM: BNR/Asp-box repeat; KEGG: cpy:Cphy_1688 two component regulator propeller domain-containing protein; SPTR: Two component regulator propeller domain protein; hypothetical protein 3506902..3509514 Muricauda ruestringensis DSM 13258 11056046 YP_004789637.1 CDS Murru_3195 NC_015945.1 3509511 3510206 D KEGG: rbi:RB2501_09315 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3509511..3510206 Muricauda ruestringensis DSM 13258 11056047 YP_004789638.1 CDS Murru_3196 NC_015945.1 3510513 3511571 D KEGG: msv:Mesil_1976 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3510513..3511571 Muricauda ruestringensis DSM 13258 11056048 YP_004789639.1 CDS Murru_3197 NC_015945.1 3511733 3512380 R PFAM: Tetratricopeptide repeat; InterPro IPR001440:IPR019734; KEGG: mtt:Ftrac_1158 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein; hypothetical protein complement(3511733..3512380) Muricauda ruestringensis DSM 13258 11056049 YP_004789640.1 CDS Murru_3198 NC_015945.1 3512384 3512881 R KEGG: mtt:Ftrac_1335 hypothetical protein; hypothetical protein complement(3512384..3512881) Muricauda ruestringensis DSM 13258 11056050 YP_004789641.1 CDS Murru_3199 NC_015945.1 3512947 3513570 R PFAM: Domain of unknown function (DU1801); COGs: COG4430 conserved hypothetical protein; InterPro IPR014922; KEGG: gtn:GTNG_1580 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: Putative uncharacterized protein; hypothetical protein complement(3512947..3513570) Muricauda ruestringensis DSM 13258 11056051 YP_004789642.1 CDS Murru_3200 NC_015945.1 3513567 3513920 R PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; InterPro IPR004360; KEGG: nml:Namu_5280 glyoxalase/bleomycin resistance protein/dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Glyoxylase; bleomycin resistance protein complement(3513567..3513920) Muricauda ruestringensis DSM 13258 11056052 YP_004789643.1 CDS Murru_3201 NC_015945.1 3513941 3514522 R PFAM: Domain of unknown function (DU1801); COGs: COG4430 conserved hypothetical protein; InterPro IPR014922; KEGG: rbi:RB2501_13014 hypothetical protein; PFAM: Protein of unknown function DUF1801; SPTR: Putative uncharacterized protein; hypothetical protein complement(3513941..3514522) Muricauda ruestringensis DSM 13258 11056053 YP_004789644.1 CDS Murru_3202 NC_015945.1 3514527 3514913 R KEGG: fjo:Fjoh_2827 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3514527..3514913) Muricauda ruestringensis DSM 13258 11056054 YP_004789645.1 CDS Murru_3203 NC_015945.1 3514900 3515085 R hypothetical protein complement(3514900..3515085) Muricauda ruestringensis DSM 13258 11056055 YP_004789646.1 CDS Murru_3204 NC_015945.1 3515200 3515661 R PFAM: Activator of Hsp90 ATPase homolog 1-like protein; COGs: COG3832 conserved hypothetical protein; InterPro IPR013538; KEGG: chu:CHU_2913 hypothetical protein; PFAM: Activator of Hsp90 ATPase homologue 1-like; SPTR: Putative uncharacterized protein; Activator of Hsp90 ATPase 1 family protein complement(3515200..3515661) Muricauda ruestringensis DSM 13258 11056056 YP_004789647.1 CDS Murru_3205 NC_015945.1 3515663 3515986 R PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: fjo:Fjoh_2829 regulatory protein, ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family; regulatory protein ArsR complement(3515663..3515986) Muricauda ruestringensis DSM 13258 11056057 YP_004789648.1 CDS Murru_3206 NC_015945.1 3516858 3519053 D PFAM: PA domain; Peptidase family M28; Transferrin receptor-like dimerisation domain; COGs: COG2234 aminopeptidase; InterPro IPR003137:IPR007484; KEGG: rbi:RB2501_12577 hypothetical protein; PFAM: Peptidase M28; Protease-associated domain, PA; PRIAM: Glutamate carboxypeptidase II; SPTR: Putative uncharacterized protein; glutamate carboxypeptidase II 3516858..3519053 Muricauda ruestringensis DSM 13258 11056058 YP_004789649.1 CDS Murru_3207 NC_015945.1 3519190 3519810 D PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: aas:Aasi_0101 DNA repair protein RadC; PFAM: Uncharacterised protein family UPF0758; SPTR: DNA repair protein; DNA repair protein RadC 3519190..3519810 Muricauda ruestringensis DSM 13258 11056059 YP_004789650.1 CDS Murru_3208 NC_015945.1 3519822 3521090 R SPTR: Putative uncharacterized protein; hypothetical protein complement(3519822..3521090) Muricauda ruestringensis DSM 13258 11056060 YP_004789651.1 CDS Murru_3209 NC_015945.1 3521098 3523332 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003594; KEGG: amr:AM1_A0018 sensor histidine kinase, putative; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Putative uncharacterized protein; histidine kinase complement(3521098..3523332) Muricauda ruestringensis DSM 13258 11056061 YP_004789652.1 CDS Murru_3210 NC_015945.1 3523332 3524636 R PFAM: DNA methylase; InterPro IPR002941; KEGG: bca:BCE_5606 modification methylase, putative; PFAM: DNA methylase N-4/N-6; SPTR: Putative modification methylase; DNA methylase N-4/N-6 domain-containing protein complement(3523332..3524636) Muricauda ruestringensis DSM 13258 11056062 YP_004789653.1 CDS Murru_3211 NC_015945.1 3524761 3524898 D hypothetical protein 3524761..3524898 Muricauda ruestringensis DSM 13258 11056063 YP_004789654.1 CDS Murru_3212 NC_015945.1 3524924 3525304 R PFAM: Domain of unknown function DUF302; InterPro IPR005180; PFAM: Domain of unknown function DUF302; hypothetical protein complement(3524924..3525304) Muricauda ruestringensis DSM 13258 11056064 YP_004789655.1 CDS Murru_3213 NC_015945.1 3525317 3526198 R PFAM: Bacterial regulatory helix-turn-helix proteins, AraC family; AraC-like ligand binding domain; COGs: COG2207 AraC-type DNA-binding domain-containing protein; InterPro IPR000005:IPR018060; KEGG: cpi:Cpin_4620 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain; SPTR: Helix-turn-helix, AraC domain protein; AraC family transcriptional regulator complement(3525317..3526198) Muricauda ruestringensis DSM 13258 11056065 YP_004789656.1 CDS Murru_3214 NC_015945.1 3526430 3526846 R PFAM: Protein of unknown function (DUF1348); COGs: COG3558 conserved hypothetical protein; InterPro IPR009783; KEGG: cpi:Cpin_7146 protein of unknown function DUF1348; PFAM: Protein of unknown function DUF1348; SPTR: Putative uncharacterized protein; hypothetical protein complement(3526430..3526846) Muricauda ruestringensis DSM 13258 11056066 YP_004789657.1 CDS Murru_3215 NC_015945.1 3526883 3527086 R hypothetical protein complement(3526883..3527086) Muricauda ruestringensis DSM 13258 11056067 YP_004789658.1 CDS Murru_3216 NC_015945.1 3527119 3527658 R PFAM: Carboxymuconolactone decarboxylase family; TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase AhpD family core domain; COGs: COG2128 conserved hypothetical protein; InterPro IPR003779; KEGG: psl:Psta_0275 uncharacterized peroxidase-related enzyme; PFAM: Carboxymuconolactone decarboxylase; SPTR: Uncharacterized peroxidase-related enzyme; carboxymuconolactone decarboxylase complement(3527119..3527658) Muricauda ruestringensis DSM 13258 11056068 YP_004789659.1 CDS Murru_3218 NC_015945.1 3528439 3528945 R hypothetical protein complement(3528439..3528945) Muricauda ruestringensis DSM 13258 11056070 YP_004789660.1 CDS Murru_3219 NC_015945.1 3529001 3531862 D PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; COGs: COG0178 Excinuclease ATPase subunit; InterPro IPR004602:IPR003439; KEGG: fbc:FB2170_12131 excinuclease ABC subunit A; PFAM: ABC transporter-like; SPTR: Excinuclease ABC subunit A; TIGRFAM: Excinuclease ABC, A subunit; excinuclease ABC subunit A 3529001..3531862 Muricauda ruestringensis DSM 13258 11056071 YP_004789661.1 CDS Murru_3220 NC_015945.1 3531877 3532569 D PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein; COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: fbc:FB2170_12136 hypothetical protein; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; SPTR: Putative uncharacterized protein; TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; hypothetical protein 3531877..3532569 Muricauda ruestringensis DSM 13258 11056072 YP_004789662.1 CDS Murru_3221 NC_015945.1 3532529 3535414 D KEGG: rbi:RB2501_14549 aminopeptidase N; SPTR: Aminopeptidase N; aminopeptidase N 3532529..3535414 Muricauda ruestringensis DSM 13258 11056073 YP_004789663.1 CDS Murru_3222 NC_015945.1 3535572 3537980 D PFAM: Dehydrogenase E1 component; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; COGs: COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex dehydrogenase (E1) component eukaryotic type beta subunit; InterPro IPR001017:IPR005475:IPR005476; KEGG: fbc:FB2170_12146 pyruvate dehydrogenase E1 subunit beta; PFAM: Transketolase, C-terminal; Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component; SMART: Transketolase-like, pyrimidine-binding domain; SPTR: Pyruvate dehydrogenase E1 beta subunit; transketolase 3535572..3537980 Muricauda ruestringensis DSM 13258 11056074 YP_004789664.1 CDS Murru_3223 NC_015945.1 3538090 3538467 D PFAM: DoxX; COGs: COG2259 membrane protein; InterPro IPR011637; KEGG: fbc:FB2170_12156 hypothetical protein; PFAM: Uncharacterised protein family YphA; SPTR: Putative uncharacterized protein; DoxX family protein 3538090..3538467 Muricauda ruestringensis DSM 13258 11056075 YP_004789665.1 CDS Murru_3224 NC_015945.1 3538470 3539471 R PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR005790:IPR010372; KEGG: fbc:FB2170_12161 hypothetical protein; PFAM: DNA polymerase III, delta; SPTR: Putative uncharacterized protein; TIGRFAM: DNA polymerase III, delta subunit; DNA polymerase III subunit delta complement(3538470..3539471) Muricauda ruestringensis DSM 13258 11056076 YP_004789666.1 CDS Murru_3225 NC_015945.1 3539498 3539944 D PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); InterPro IPR007409; KEGG: fbc:FB2170_12166 hypothetical protein; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; SPTR: Putative uncharacterized protein; Restriction endonuclease, type I, EcoRI, R subunit/Type III 3539498..3539944 Muricauda ruestringensis DSM 13258 11056077 YP_004789667.1 CDS Murru_3226 NC_015945.1 3539957 3540958 D PFAM: Glycosyl transferase family 2; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: fbc:FB2170_12171 glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyltransferase; family 2 glycosyl transferase 3539957..3540958 Muricauda ruestringensis DSM 13258 11056078 YP_004789668.1 CDS Murru_3227 NC_015945.1 3541055 3541927 D PFAM: OmpA family; COGs: COG1360 Flagellar motor protein; InterPro IPR006665; KEGG: rbi:RB2501_14509 putative flagellar motor protein MotB; PFAM: Outer membrane protein, OmpA/MotB, C-terminal; SPTR: Putative flagellar motor protein MotB; OmpA/MotB domain-containing protein 3541055..3541927 Muricauda ruestringensis DSM 13258 11056079 YP_004789669.1 CDS Murru_3228 NC_015945.1 3541981 3542601 R PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; COGs: COG0009 Putative translation factor (SUA5); InterPro IPR004388:IPR006070; KEGG: rbi:RB2501_14504 putative SUA5/YciO/YrdC family protein; PFAM: Sua5/YciO/YrdC, N-terminal; SPTR: Putative Sua5/yciO/yrdC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; Sua5/YciO/YrdC/YwlC family protein complement(3541981..3542601) Muricauda ruestringensis DSM 13258 11056080 YP_004789670.1 CDS Murru_3229 NC_015945.1 3542726 3543511 D hypothetical protein 3542726..3543511 Muricauda ruestringensis DSM 13258 11056081 YP_004789671.1 CDS Murru_3230 NC_015945.1 3543508 3545718 R KEGG: gau:GAU_2748 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3543508..3545718) Muricauda ruestringensis DSM 13258 11056082 YP_004789672.1 CDS Murru_3231 NC_015945.1 3545849 3546421 R KEGG: pru:PRU_0453 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3545849..3546421) Muricauda ruestringensis DSM 13258 11056083 YP_004789673.1 CDS Murru_3232 NC_015945.1 3546831 3549161 R PFAM: UvrD/REP helicase; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: fbc:FB2170_12186 putative helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: Putative helicase; UvrD/REP helicase complement(3546831..3549161) Muricauda ruestringensis DSM 13258 11056084 YP_004789674.1 CDS Murru_3233 NC_015945.1 3549303 3549842 D PFAM: DsrE/DsrF-like family; KEGG: fbc:FB2170_12191 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3549303..3549842 Muricauda ruestringensis DSM 13258 11056085 YP_004789675.1 CDS Murru_3234 NC_015945.1 3549860 3551146 D PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168:IPR002933:IPR011650; KEGG: rbi:RB2501_14489 peptidase M20D, amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; PRIAM: N-acetyldiaminopimelate deacetylase; SPTR: Peptidase M20D, amidohydrolase; TIGRFAM: Peptidase M20D, amidohydrolase; amidohydrolase 3549860..3551146 Muricauda ruestringensis DSM 13258 11056086 YP_004789676.1 CDS Murru_3235 NC_015945.1 3551176 3552162 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: zpr:ZPR_4669 transposase IS116/IS110/IS902 family; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; SPTR: Transposase; transposase IS116/IS110/IS902 family protein complement(3551176..3552162) Muricauda ruestringensis DSM 13258 11056087 YP_004789677.1 CDS Murru_3236 NC_015945.1 3552411 3552551 D hypothetical protein 3552411..3552551 Muricauda ruestringensis DSM 13258 11056088 YP_004789678.1 CDS Murru_3237 NC_015945.1 3552557 3554149 D PFAM: Conserved region in glutamate synthase; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR002932; KEGG: fbc:FB2170_12201 glutamate synthase; PFAM: Glutamate synthase, central-C; PRIAM: Glutamate synthase (NADPH); SPTR: Glutamate synthase; glutamate synthase 3552557..3554149 Muricauda ruestringensis DSM 13258 11056089 YP_004789679.1 CDS Murru_3238 NC_015945.1 3554169 3554942 D KEGG: fbc:FB2170_12206 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3554169..3554942 Muricauda ruestringensis DSM 13258 11056090 YP_004789680.1 CDS Murru_3239 NC_015945.1 3555020 3555541 D KEGG: fbc:FB2170_12211 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3555020..3555541 Muricauda ruestringensis DSM 13258 11056091 YP_004789681.1 CDS Murru_3240 NC_015945.1 3555944 3556858 R PFAM: Patatin-like phospholipase; InterPro IPR002641; KEGG: fbc:FB2170_12216 hypothetical protein; PFAM: Patatin/Phospholipase A2-related; SPTR: Putative uncharacterized protein; patatin complement(3555944..3556858) Muricauda ruestringensis DSM 13258 11056092 YP_004789682.1 CDS Murru_3241 NC_015945.1 3556855 3558945 R PFAM: Peptidase family M1; COGs: COG0308 Aminopeptidase N; InterPro IPR014782; KEGG: fbc:FB2170_12221 aminopeptidase; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; PRIAM: Membrane alanyl aminopeptidase; SPTR: Aminopeptidase; membrane alanyl aminopeptidase complement(3556855..3558945) Muricauda ruestringensis DSM 13258 11056093 YP_004789683.1 CDS Murru_3242 NC_015945.1 3558992 3561097 D PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; OB-fold nucleic acid binding domain; TIGRFAM: ATP-dependent DNA helicase RecG; COGs: COG1200 RecG-like helicase; InterProIPR004609:IPR004365:IPR011545:IPR001650:IPR 014001; KEGG: fbc:FB2170_12226 ATP-dependent DNA helicase RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; SPTR: ATP-dependent DNA helicase RecG; TIGRFAM: DNA helicase, ATP-dependent, RecG; ATP-dependent DNA helicase RecG 3558992..3561097 Muricauda ruestringensis DSM 13258 11056094 YP_004789684.1 CDS Murru_3243 NC_015945.1 3561298 3562710 D PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; COGs: COG0065 3-isopropylmalate dehydratase large subunit; HAMAP: 3-isopropylmalate dehydratase, large subunit; InterPro IPR004430:IPR001030; KEGG: rbi:RB2501_14454 isopropylmalate isomerase large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; SPTR: 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase large subunit 3561298..3562710 Muricauda ruestringensis DSM 13258 11056095 YP_004789685.1 CDS Murru_3244 NC_015945.1 3562812 3563408 D PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; COGs: COG0066 3-isopropylmalate dehydratase small subunit; InterPro IPR004431:IPR000573; KEGG: fbc:FB2170_12251 3-isopropylmalate dehydratase small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel; SPTR: 3-isopropylmalate dehydratase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; 3-isopropylmalate dehydratase small subunit 3562812..3563408 Muricauda ruestringensis DSM 13258 11056096 YP_004789686.1 CDS Murru_3245 NC_015945.1 3563439 3564956 D PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891:IPR013709; KEGG: fbc:FB2170_12256 putative alpha-isopropylmalate synthase 2; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; PRIAM: (R)-citramalate synthase; SMART: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; SPTR: Putative alpha-isopropylmalate synthase 2; (R)-citramalate synthase 3563439..3564956 Muricauda ruestringensis DSM 13258 11056097 YP_004789687.1 CDS Murru_3246 NC_015945.1 3565000 3566058 D PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; HAMAP: Isopropylmalate dehydrogenase; InterPro IPR004429:IPR001804; KEGG: phe:Phep_3428 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; PRIAM: 3-isopropylmalate dehydrogenase; SPTR: 3-isopropylmalate dehydrogenase; TIGRFAM: Isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 3565000..3566058 Muricauda ruestringensis DSM 13258 11056098 YP_004789688.1 CDS Murru_3247 NC_015945.1 3566452 3568044 R PFAM: Aldehyde dehydrogenase family; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: fbc:FB2170_12276 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)); SPTR: Aldehyde dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase complement(3566452..3568044) Muricauda ruestringensis DSM 13258 11056099 YP_004789689.1 CDS Murru_3248 NC_015945.1 3568206 3569471 R PFAM: C-terminal regulatory domain of Threonine dehydratase; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine ammonia-lyase, biosynthetic, long form; threonine dehydratase; COGs: COG1171 Threonine dehydratase; InterPro IPR011820:IPR001926:IPR001721; KEGG: fbc:FB2170_12281 threonine dehydratase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Threonine dehydratase, C-terminal; SPTR: Threonine dehydratase; TIGRFAM: Threonine dehydratase; threonine dehydratase complement(3568206..3569471) Muricauda ruestringensis DSM 13258 11056100 YP_004789690.1 CDS Murru_3249 NC_015945.1 3569490 3570965 R PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase; COGs: COG0059 Ketol-acid reductoisomerase; InterPro IPR013023:IPR013116:IPR000506; KEGG: fbc:FB2170_12286 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase C-terminal; Acetohydroxy acid isomeroreductase, catalytic; PRIAM: Ketol-acid reductoisomerase; SPTR: Ketol-acid reductoisomerase; TIGRFAM: Acetohydroxy acid isomeroreductase; ketol-acid reductoisomerase complement(3569490..3570965) Muricauda ruestringensis DSM 13258 11056101 YP_004789691.1 CDS Murru_3250 NC_015945.1 3570990 3571517 R PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit; COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR004789:IPR002912:IPR019455; KEGG: rbi:RB2501_14424 putative acetohydroxyacid synthase small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT; SPTR: Putative acetohydroxyacid synthase small subunit; TIGRFAM: Acetolactate synthase, small subunit; acetolactate synthase small subunit complement(3570990..3571517) Muricauda ruestringensis DSM 13258 11056102 YP_004789692.1 CDS Murru_3251 NC_015945.1 3571596 3573329 R PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR012846:IPR012001:IPR012000:IPR011766; KEGG: fbc:FB2170_12296 acetolactate synthase large subunit; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: Acetolactate synthase; SPTR: Acetolactate synthase large subunit; TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; acetolactate synthase large subunit complement(3571596..3573329) Muricauda ruestringensis DSM 13258 11056103 YP_004789693.1 CDS Murru_3252 NC_015945.1 3573366 3575042 R PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; HAMAP: Dihydroxy-acid dehydratase; InterPro IPR004404:IPR000581; KEGG: rbi:RB2501_14414 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: Dihydroxy-acid dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; dihydroxy-acid dehydratase complement(3573366..3575042) Muricauda ruestringensis DSM 13258 11056104 YP_004789694.1 CDS Murru_3253 NC_015945.1 3575528 3576460 R KEGG: gfo:GFO_0858 secreted protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3575528..3576460) Muricauda ruestringensis DSM 13258 11056105 YP_004789695.1 CDS Murru_3254 NC_015945.1 3576672 3577511 R PFAM: Allophanate hydrolase subunit 2; TIGRFAM: biotin-dependent carboxylase uncharacterized domain; COGs: COG1984 Allophanate hydrolase subunit 2; InterPro IPR003778; KEGG: fbc:FB2170_12351 allophanate hydrolase subunit 2; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2; SPTR: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 2 complement(3576672..3577511) Muricauda ruestringensis DSM 13258 11056106 YP_004789696.1 CDS Murru_3255 NC_015945.1 3577504 3578238 R PFAM: Allophanate hydrolase subunit 1; TIGRFAM: TIGR00370 family protein; COGs: COG2049 Allophanate hydrolase subunit 1; InterPro IPR010016:IPR003833; KEGG: fbc:FB2170_12356 hypothetical protein; PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00370; hypothetical protein complement(3577504..3578238) Muricauda ruestringensis DSM 13258 11056107 YP_004789697.1 CDS Murru_3256 NC_015945.1 3578235 3578978 R PFAM: LamB/YcsF family; COGs: COG1540 conserved hypothetical protein; InterPro IPR005501; KEGG: fbc:FB2170_12361 hypothetical protein; PFAM: Uncharacterised protein family UPF0271, LamB/YcsF; SPTR: Putative uncharacterized protein; LamB/YcsF family protein complement(3578235..3578978) Muricauda ruestringensis DSM 13258 11056108 YP_004789698.1 CDS Murru_3257 NC_015945.1 3579192 3580388 R PFAM: Natural resistance-associated macrophage protein; TIGRFAM: NRAMP (natural resistance-associated macrophage protein) metal ion transporters; COGs: COG1914 Mn2+ and Fe2+ transporter of the NRAMP family; InterPro IPR001046; KEGG: fbc:FB2170_12366 NRAMP family Mn2+/Fe2+ transporter; PFAM: Natural resistance-associated macrophage protein; SPTR: Mn2+/Fe2+ transporter, NRAMP family protein; natural resistance-associated macrophage protein complement(3579192..3580388) Muricauda ruestringensis DSM 13258 11056109 YP_004789699.1 CDS Murru_3258 NC_015945.1 3580570 3581013 D KEGG: fbc:FB2170_12376 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3580570..3581013 Muricauda ruestringensis DSM 13258 11056110 YP_004789700.1 CDS Murru_3259 NC_015945.1 3581010 3581420 R KEGG: mno:Mnod_3161 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3581010..3581420) Muricauda ruestringensis DSM 13258 11056111 YP_004789701.1 CDS Murru_3260 NC_015945.1 3581602 3583137 R PFAM: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein; COGs: COG0606 ATPase with chaperone activity; InterPro IPR004482:IPR000523:IPR003593; KEGG: fbc:FB2170_12411 magnesium chelatase subunit ChlI; PFAM: Magnesium chelatase, ChlI subunit; SMART: ATPase, AAA+ type, core; SPTR: Magnesium chelatase, subunit ChlI; TIGRFAM: Mg chelatase-related protein; Mg chelatase subunit ChlI complement(3581602..3583137) Muricauda ruestringensis DSM 13258 11056112 YP_004789702.1 CDS Murru_3261 NC_015945.1 3583245 3585632 R PFAM: Penicillin amidase; COGs: COG2366 Protein related to penicillin acylase; InterPro IPR002692; KEGG: fbc:FB2170_12451 penicillin amidase; PFAM: Peptidase S45, penicillin amidase; PRIAM: Acyl-homoserine-lactone acylase; SPTR: Penicillin amidase; acyl-homoserine-lactone acylase complement(3583245..3585632) Muricauda ruestringensis DSM 13258 11056113 YP_004789703.1 CDS Murru_3262 NC_015945.1 3585715 3587694 R PFAM: Cytochrome C biogenesis protein transmembrane region; Protein of unknown function, DUF255; COGs: COG4232 Thiol:disulfide interchange protein; KEGG: rbi:RB2501_14344 thiol:disulfide interchange protein DsbD; PRIAM: Protein-disulfide reductase; SPTR: Thiol:disulfide interchange protein dsbD, putative; Protein-disulfide reductase complement(3585715..3587694) Muricauda ruestringensis DSM 13258 11056114 YP_004789704.1 CDS Murru_3263 NC_015945.1 3587691 3589001 R PFAM: TilS substrate C-terminal domain; PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain; COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; HAMAP: Lysidine-tRNA(Ile) synthetase; InterPro IPR012094:IPR012795:IPR012796:IPR011063; KEGG: fbc:FB2170_12466 putative cell-cycle protein; PFAM: tRNA(Ile)-lysidine/2-thiocytidine synthase; SMART: Lysidine-tRNA(Ile) synthetase, C-terminal; SPTR: tRNA(Ile)-lysidine synthase; TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; Lysidine-tRNA(Ile) synthetase, C-terminal; tRNA(Ile)-lysidine synthase complement(3587691..3589001) Muricauda ruestringensis DSM 13258 11056115 YP_004789705.1 CDS Murru_3264 NC_015945.1 3589349 3589546 R hypothetical protein complement(3589349..3589546) Muricauda ruestringensis DSM 13258 11056116 YP_004789706.1 CDS Murru_3265 NC_015945.1 3589582 3591468 D PFAM: Mycoplasma protein of unknown function, DUF285; Cadherin domain; TIGRFAM: bacterial surface protein 26-residue repeat; InterPro IPR011889:IPR002126:IPR005046; KEGG: srm:PSR_61030 conserved hypothetical protein containing fibronectin, type III domain; PFAM: Protein of unknown function DUF285, lipoprotein predicted; Cadherin; SMART: Cadherin; SPTR: Putative uncharacterized protein; TIGRFAM: Bacterial surface protein 26-residue repeat; lipoprotein 3589582..3591468 Muricauda ruestringensis DSM 13258 11056117 YP_004789707.1 CDS Murru_3266 NC_015945.1 3591918 3593204 R PFAM: Anthranilate synthase component I, N terminal region; chorismate binding enzyme; COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR015890; KEGG: fbc:FB2170_12476 para-aminobenzoate synthase component I; PFAM: Chorismate binding, C-terminal; PRIAM: Anthranilate synthase; SPTR: Putative uncharacterized protein; anthranilate synthase complement(3591918..3593204) Muricauda ruestringensis DSM 13258 11056118 YP_004789708.1 CDS Murru_3267 NC_015945.1 3593208 3593744 R PFAM: NADPH-dependent FMN reductase; COGs: COG0431 flavoprotein; InterPro IPR005025; KEGG: fbc:FB2170_12481 hypothetical protein; PFAM: NADPH-dependent FMN reductase; SPTR: Putative uncharacterized protein; NADPH-dependent FMN reductase complement(3593208..3593744) Muricauda ruestringensis DSM 13258 11056119 YP_004789709.1 CDS Murru_3268 NC_015945.1 3593875 3595071 D PFAM: Protein of unknown function (DUF1624); KEGG: fbc:FB2170_12486 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3593875..3595071 Muricauda ruestringensis DSM 13258 11056120 YP_004789710.1 CDS Murru_3269 NC_015945.1 3595206 3596609 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR006258:IPR013027:IPR004099; KEGG: fbc:FB2170_12491 dihydrolipoyl dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: Dihydrolipoyl dehydrogenase; SPTR: Dihydrolipoyl dehydrogenase; TIGRFAM: Dihydrolipoamide dehydrogenase; dihydrolipoamide dehydrogenase complement(3595206..3596609) Muricauda ruestringensis DSM 13258 11056121 YP_004789711.1 CDS Murru_3270 NC_015945.1 3596644 3597234 D hypothetical protein 3596644..3597234 Muricauda ruestringensis DSM 13258 11056122 YP_004789712.1 CDS Murru_3271 NC_015945.1 3597698 3599356 R PFAM: Mycoplasma protein of unknown function, DUF285; Cadherin domain; TIGRFAM: bacterial surface protein 26-residue repeat; InterPro IPR011889:IPR002126:IPR005046; KEGG: mtt:Ftrac_0811 lipoprotein; PFAM: Protein of unknown function DUF285, lipoprotein predicted; Cadherin; SMART: Cadherin; SPTR: Putative uncharacterized protein; TIGRFAM: Bacterial surface protein 26-residue repeat; lipoprotein complement(3597698..3599356) Muricauda ruestringensis DSM 13258 11056123 YP_004789713.1 CDS Murru_3272 NC_015945.1 3599755 3600219 R PFAM: AsnC family; COGs: COG1522 Transcriptional regulators; InterPro IPR019887:IPR019888; KEGG: fbc:FB2170_12496 putative AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type; SPTR: Putative AsnC-family transcriptional regulator; AsnC family transcriptional regulator complement(3599755..3600219) Muricauda ruestringensis DSM 13258 11056124 YP_004789714.1 CDS Murru_3273 NC_015945.1 3600292 3601590 D PFAM: Cys/Met metabolism PLP-dependent enzyme; COGs: COG0626 Cystathionine beta-lyase/cystathionine gamma-synthase; InterPro IPR000277; KEGG: fbc:FB2170_12501 cystathionine beta-lyase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cystathionine gamma-lyase; SPTR: Cystathionine beta-lyase; cystathionine gamma-synthase 3600292..3601590 Muricauda ruestringensis DSM 13258 11056125 YP_004789715.1 CDS Murru_3274 NC_015945.1 3601662 3603152 D PFAM: Na+/H+ antiporter family; TIGRFAM: Na+/H+ antiporter NhaC; COGs: COG1757 Na+/H+ antiporter; InterPro IPR004770:IPR018461; KEGG: fbc:FB2170_12506 putative Na+/H+ antiporter NnaC; PFAM: Na+/H+ antiporter NhaC-like; SPTR: Putative Na+/H+ antiporter NnaC; TIGRFAM: Na+/H+ antiporter NhaC; Na+/H+ antiporter NhaC 3601662..3603152 Muricauda ruestringensis DSM 13258 11056126 YP_004789716.1 CDS Murru_3275 NC_015945.1 3603363 3604007 D PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; COGs: COG0450 Peroxiredoxin; InterPro IPR000866:IPR019479; KEGG: fbc:FB2170_12511 putative thioredoxin peroxidase; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Peroxiredoxin, C-terminal; PRIAM: Peroxiredoxin; SPTR: Putative thioredoxin peroxidase; peroxiredoxin 3603363..3604007 Muricauda ruestringensis DSM 13258 11056127 YP_004789717.1 CDS Murru_3276 NC_015945.1 3604013 3604327 D PFAM: Thioredoxin; InterPro IPR013766; KEGG: fbc:FB2170_12516 thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin domain protein; thioredoxin domain-containing protein 3604013..3604327 Muricauda ruestringensis DSM 13258 11056128 YP_004789718.1 CDS Murru_3277 NC_015945.1 3604308 3604565 D KEGG: fps:FP1727 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3604308..3604565 Muricauda ruestringensis DSM 13258 11056129 YP_004789719.1 CDS Murru_3278 NC_015945.1 3604704 3605069 D PFAM: Prokaryotic diacylglycerol kinase; COGs: COG0818 Diacylglycerol kinase; InterPro IPR000829; KEGG: fbc:FB2170_12531 putative diacylglycerol kinase; PFAM: Diacylglycerol kinase, prokaryotic; SPTR: Probable diacylglycerol kinase; diacylglycerol kinase 3604704..3605069 Muricauda ruestringensis DSM 13258 11056130 YP_004789720.1 CDS Murru_3279 NC_015945.1 3605132 3607519 D PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543:IPR018541; KEGG: rbi:RB2501_14289 FtsK/SpoIIIE family protein; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase FtsK gamma; SMART: DNA translocase FtsK gamma; SPTR: FtsK/SpoIIIE family protein; cell division protein FtsK 3605132..3607519 Muricauda ruestringensis DSM 13258 11056131 YP_004789721.1 CDS Murru_3280 NC_015945.1 3607524 3608171 D PFAM: Outer membrane lipoprotein carrier protein LolA; KEGG: fbc:FB2170_12546 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3607524..3608171 Muricauda ruestringensis DSM 13258 11056132 YP_004789722.1 CDS Murru_3281 NC_015945.1 3608175 3609677 D PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: fbc:FB2170_12551 hypothetical protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Putative uncharacterized protein; YjgP/YjgQ family permease 3608175..3609677 Muricauda ruestringensis DSM 13258 11056133 YP_004789723.1 CDS Murru_3282 NC_015945.1 3609674 3610813 D PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase; HAMAP: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; InterPro IPR000422:IPR000926; KEGG: fbc:FB2170_12556 putative riboflavin biosynthesis protein; PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP cyclohydrolase II, RibA; SPTR: Putative riboflavin biosynthesis protein; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; 3,4-dihydroxy-2-butanone 4-phosphate synthase 3609674..3610813 Muricauda ruestringensis DSM 13258 11056134 YP_004789724.1 CDS Murru_3283 NC_015945.1 3610733 3610906 R hypothetical protein complement(3610733..3610906) Muricauda ruestringensis DSM 13258 11056135 YP_004789725.1 CDS Murru_3284 NC_015945.1 3611052 3612914 R PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_13783 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent receptor, putative; TonB-dependent receptor complement(3611052..3612914) Muricauda ruestringensis DSM 13258 11056136 YP_004789726.1 CDS Murru_3285 NC_015945.1 3613596 3614747 D PFAM: Periplasmic binding protein; COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: fbc:FB2170_13793 ABC transporter periplasmic-binding protein; PFAM: Periplasmic binding protein; SPTR: Periplasmic-binding protein of ABC transporter; ABC transporter periplasmic protein 3613596..3614747 Muricauda ruestringensis DSM 13258 11056137 YP_004789727.1 CDS Murru_3286 NC_015945.1 3614748 3615779 D PFAM: FecCD transport family; COGs: COG0609 ABC-type Fe3+-siderophore transport system permease component; InterPro IPR000522; KEGG: fbc:FB2170_13798 permease of iron(III) ABC transporter; PFAM: ABC transporter permease protein; SPTR: Permease protein of iron(III) ABC transporter; ABC transporter 3614748..3615779 Muricauda ruestringensis DSM 13258 11056138 YP_004789728.1 CDS Murru_3287 NC_015945.1 3615779 3616558 D PFAM: ABC transporter; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439:IPR003593; KEGG: rbi:RB2501_00221 putative iron transport related ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Iron-chelate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative iron transport related ATP-binding protein; iron-chelate-transporting ATPase 3615779..3616558 Muricauda ruestringensis DSM 13258 11056139 YP_004789729.1 CDS Murru_3288 NC_015945.1 3616886 3618220 D PFAM: RmuC family; COGs: COG1322 conserved hypothetical protein; InterPro IPR003798; KEGG: fbc:FB2170_13808 hypothetical protein; PFAM: DNA recombination RmuC; SPTR: Putative uncharacterized protein; RmuC-domain-containing protein 3616886..3618220 Muricauda ruestringensis DSM 13258 11056140 YP_004789730.1 CDS Murru_3289 NC_015945.1 3618233 3618598 D KEGG: fbc:FB2170_13813 6-phosphogluconate dehydrogenase; SPTR: 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase 3618233..3618598 Muricauda ruestringensis DSM 13258 11056141 YP_004789731.1 CDS Murru_3290 NC_015945.1 3618882 3619280 R PFAM: Protein of unknown function (DUF559); COGs: COG2852 conserved hypothetical protein; InterPro IPR007569; KEGG: mtt:Ftrac_0387 hypothetical protein; PFAM: Domain of unknown function DUF559; SPTR: Putative uncharacterized protein; hypothetical protein complement(3618882..3619280) Muricauda ruestringensis DSM 13258 11056142 YP_004789732.1 CDS Murru_3291 NC_015945.1 3619341 3619886 D PFAM: Thioesterase superfamily; COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: zpr:ZPR_2053 acyl-CoA thioester hydrolase; PFAM: Thioesterase superfamily; SPTR: Acyl CoA thioester hydrolase family protein; thioesterase superfamily protein 3619341..3619886 Muricauda ruestringensis DSM 13258 11056143 YP_004789733.1 CDS Murru_3292 NC_015945.1 3619867 3620592 R PFAM: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase; COGs: COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; InterPro IPR005900:IPR006148; KEGG: rbi:RB2501_00236 6-phosphogluconolactonase; PFAM: Glucosamine/galactosamine-6-phosphate isomerase; PRIAM: 6-phosphogluconolactonase; SPTR: 6-phosphogluconolactonase; TIGRFAM: 6-phosphogluconolactonase, DevB-type; 6-phosphogluconolactonase complement(3619867..3620592) Muricauda ruestringensis DSM 13258 11056144 YP_004789734.1 CDS Murru_3293 NC_015945.1 3620698 3622209 R PFAM: Glucose-6-phosphate dehydrogenase, C-terminal domain; Glucose-6-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; COGs: COG0364 Glucose-6-phosphate 1-dehydrogenase; InterPro IPR001282:IPR022674:IPR022675; KEGG: rbi:RB2501_00241 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase, C-terminal; Glucose-6-phosphate dehydrogenase, NAD-binding; PRIAM: Glucose-6-phosphate dehydrogenase; SPTR: Glucose-6-phosphate 1-dehydrogenase; TIGRFAM: Glucose-6-phosphate dehydrogenase; glucose-6-phosphate 1-dehydrogenase complement(3620698..3622209) Muricauda ruestringensis DSM 13258 11056145 YP_004789735.1 CDS Murru_3294 NC_015945.1 3622396 3623805 D PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; 6-phosphogluconate dehydrogenase, C-terminal domain; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; COGs: COG0362 6-phosphogluconate dehydrogenase; InterPro IPR006113:IPR006115:IPR006114; KEGG: fbc:FB2170_13818 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, C-terminal; 6-phosphogluconate dehydrogenase, NAD-binding; PRIAM: Phosphogluconate dehydrogenase (decarboxylating); SPTR: 6-phosphogluconate dehydrogenase, decarboxylating; TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphogluconate dehydrogenase 3622396..3623805 Muricauda ruestringensis DSM 13258 11056146 YP_004789736.1 CDS Murru_3295 NC_015945.1 3623816 3624667 D PFAM: Protein of unknown function, DUF399; COGs: COG3016 Uncharacterized iron-regulated protein; InterPro IPR007314; KEGG: mtt:Ftrac_2035 hypothetical protein; PFAM: Domain of unknown function DUF399; SPTR: Putative uncharacterized protein; hypothetical protein 3623816..3624667 Muricauda ruestringensis DSM 13258 11056147 YP_004789737.1 CDS Murru_3296 NC_015945.1 3624759 3626786 D PFAM: Prolyl oligopeptidase family; WD40-like Beta Propeller Repeat; COGs: COG1506 Dipeptidyl aminopeptidase/acylaminoacyl-peptidase; InterPro IPR011659:IPR001375; KEGG: srm:SRM_02249 putative peptidase; SPTR: Peptidase, S9A/B/C family; putative peptidase 3624759..3626786 Muricauda ruestringensis DSM 13258 11056148 YP_004789738.1 CDS Murru_3297 NC_015945.1 3627084 3628760 D PFAM: Bacterial protein of unknown function (DUF885); KEGG: mtt:Ftrac_2937 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3627084..3628760 Muricauda ruestringensis DSM 13258 11056149 YP_004789739.1 CDS Murru_3298 NC_015945.1 3628841 3629596 R PFAM: Domain of unknown function DUF1828; InterPro IPR014960; KEGG: tye:THEYE_A1695 hypothetical protein; PFAM: Domain of unknown function DUF1828; SPTR: Putative uncharacterized protein; hypothetical protein complement(3628841..3629596) Muricauda ruestringensis DSM 13258 11056150 YP_004789740.1 CDS Murru_3299 NC_015945.1 3629596 3630093 R KEGG: tye:THEYE_A1696 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3629596..3630093) Muricauda ruestringensis DSM 13258 11056151 YP_004789741.1 CDS Murru_3300 NC_015945.1 3630479 3630802 R hypothetical protein complement(3630479..3630802) Muricauda ruestringensis DSM 13258 11056152 YP_004789742.1 CDS Murru_3301 NC_015945.1 3630950 3631573 D PFAM: Methyltransferase domain; KEGG: fjo:Fjoh_4631 methyltransferase type 11; SPTR: Putative uncharacterized protein; type 11 methyltransferase 3630950..3631573 Muricauda ruestringensis DSM 13258 11056153 YP_004789743.1 CDS Murru_3302 NC_015945.1 3631699 3633510 D PFAM: Helix-turn-helix; Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001387:IPR001466; KEGG: rbi:RB2501_10657 hypothetical protein; PFAM: Beta-lactamase-related; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; XRE family transcriptional regulator 3631699..3633510 Muricauda ruestringensis DSM 13258 11056154 YP_004789744.1 CDS Murru_3303 NC_015945.1 3633647 3635329 D PFAM: D-aminoacylase, C-terminal region; Amidohydrolase family; COGs: COG3653 N-acyl-D-aspartate/D-glutamate deacylase; InterPro IPR006680:IPR012855; KEGG: gau:GAU_2343 D-aminoacylase; PFAM: D-aminoacylase, C-terminal; Amidohydrolase 1; PRIAM: N-acyl-D-amino-acid deacylase; SPTR: N-acyl-D-amino-acid deacylase; N-acyl-D-amino-acid deacylase 3633647..3635329 Muricauda ruestringensis DSM 13258 11056155 YP_004789745.1 CDS Murru_3304 NC_015945.1 3635511 3636956 D PFAM: Tetratricopeptide repeat; Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466:IPR001440:IPR019734; KEGG: fjo:Fjoh_2768 beta-lactamase; PFAM: Beta-lactamase-related; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat; SPTR: Beta-lactamase; beta-lactamase 3635511..3636956 Muricauda ruestringensis DSM 13258 11056156 YP_004789746.1 CDS Murru_3305 NC_015945.1 3636976 3637221 R PFAM: ThiS family; InterPro IPR003749; KEGG: rbi:RB2501_14949 hypothetical protein; PFAM: ThiamineS; SPTR: Putative uncharacterized protein; sulfur carrier protein ThiS complement(3636976..3637221) Muricauda ruestringensis DSM 13258 11056157 YP_004789747.1 CDS Murru_3306 NC_015945.1 3637436 3638518 D PFAM: von Willebrand factor type A domain; InterPro IPR002035; KEGG: rbi:RB2501_14954 hypothetical protein; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A; SPTR: Putative uncharacterized protein; von Willebrand factor type A 3637436..3638518 Muricauda ruestringensis DSM 13258 11056158 YP_004789748.1 CDS Murru_3307 NC_015945.1 3638592 3639539 D PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: fbc:FB2170_13101 putative glycosyl hydrolase; PFAM: Protein of unknown function DUF1080; SPTR: Probable large multifunctional protein-putative glycosyl hydrolase; hypothetical protein 3638592..3639539 Muricauda ruestringensis DSM 13258 11056159 YP_004789749.1 CDS Murru_3308 NC_015945.1 3639848 3640447 R PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: fbc:FB2170_07170 putative secreted glycosyl hydrolase; PFAM: Protein of unknown function DUF1080; SPTR: Probable secreted glycosyl hydrolase; hypothetical protein complement(3639848..3640447) Muricauda ruestringensis DSM 13258 11056160 YP_004789750.1 CDS Murru_3309 NC_015945.1 3640486 3641913 R PFAM: Zinc carboxypeptidase; InterPro IPR000834; KEGG: fbc:FB2170_11411 hypothetical protein; PFAM: Peptidase M14, carboxypeptidase A; SMART: Peptidase M14, carboxypeptidase A; SPTR: Putative uncharacterized protein; peptidase M14 carboxypeptidase A complement(3640486..3641913) Muricauda ruestringensis DSM 13258 11056161 YP_004789751.1 CDS Murru_3310 NC_015945.1 3641940 3642596 R PFAM: N-acetylmuramoyl-L-alanine amidase; InterPro IPR002502; KEGG: fbc:FB2170_11406 hypothetical protein; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2; SPTR: Putative uncharacterized protein; N-acetylmuramoyl-L-alanine amidase family protein complement(3641940..3642596) Muricauda ruestringensis DSM 13258 11056162 YP_004789752.1 CDS Murru_3311 NC_015945.1 3642662 3643648 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: zpr:ZPR_4669 transposase IS116/IS110/IS902 family; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; SPTR: Transposase; transposase IS116/IS110/IS902 family protein complement(3642662..3643648) Muricauda ruestringensis DSM 13258 11056163 YP_004789753.1 CDS Murru_3312 NC_015945.1 3643972 3644358 R KEGG: fbc:FB2170_11401 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3643972..3644358) Muricauda ruestringensis DSM 13258 11056164 YP_004789754.1 CDS Murru_3313 NC_015945.1 3644391 3645878 R KEGG: fbc:FB2170_07339 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3644391..3645878) Muricauda ruestringensis DSM 13258 11056165 YP_004789755.1 CDS Murru_3314 NC_015945.1 3645914 3646786 R PFAM: Pirin C-terminal cupin domain; Pirin; COGs: COG1741 Pirin-related protein; InterPro IPR003829:IPR008778; KEGG: gfo:GFO_1142 pirin family protein; PFAM: Pirin, N-terminal; Pirin, C-terminal; SPTR: Pirin, N-terminal:Pirin, C-terminal; Pirin domain-containing protein complement(3645914..3646786) Muricauda ruestringensis DSM 13258 11056166 YP_004789756.1 CDS Murru_3315 NC_015945.1 3646807 3648171 D PFAM: Beta-lactamase; COGs: COG1680 Beta-lactamase class C and other penicillin binding protein; InterPro IPR001466; KEGG: fbc:FB2170_11396 putative hydrolase transmembrane protein; PFAM: Beta-lactamase-related; SPTR: Putative hydrolase transmembrane protein; beta-lactamase 3646807..3648171 Muricauda ruestringensis DSM 13258 11056167 YP_004789757.1 CDS Murru_3316 NC_015945.1 3648880 3650073 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: fbc:FB2170_12561 polysaccharide biosynthesis protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: Glutamine--scyllo-inositol transaminase; SPTR: Polysaccharide biosynthesis protein; glutamine--scyllo-inositol transaminase complement(3648880..3650073) Muricauda ruestringensis DSM 13258 11056168 YP_004789758.1 CDS Murru_3317 NC_015945.1 3650088 3650840 R PFAM: Sulfite exporter TauE/SafE; COGs: COG0730 permease; InterPro IPR002781; KEGG: rbi:RB2501_14259 hypothetical protein; PFAM: Protein of unknown function DUF81; SPTR: Putative uncharacterized protein; hypothetical protein complement(3650088..3650840) Muricauda ruestringensis DSM 13258 11056169 YP_004789759.1 CDS Murru_3318 NC_015945.1 3651331 3652560 D PFAM: Phage integrase family; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: gfo:GFO_0671 phage integrase family protein; PFAM: Integrase, catalytic core, phage; SPTR: Phage integrase family protein; integrase family protein 3651331..3652560 Muricauda ruestringensis DSM 13258 11056171 YP_004789760.1 CDS Murru_3321 NC_015945.1 3653479 3654402 R PFAM: HipA-like C-terminal domain; HipA-like N-terminal domain; COGs: COG3550 conserved hypothetical protein; InterPro IPR012894:IPR012893; KEGG: lpn:lpg2370 hypothetical protein; PFAM: HipA-like, N-terminal; HipA-like, C-terminal; SPTR: Putative uncharacterized protein; HipA domain-containing protein complement(3653479..3654402) Muricauda ruestringensis DSM 13258 11056174 YP_004789761.1 CDS Murru_3322 NC_015945.1 3654395 3654712 R TIGRFAM: HipA N-terminal domain; InterPro IPR017508; KEGG: lpa:lpa_03436 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: HipA, N-terminal; HipA N-terminal domain-containing protein complement(3654395..3654712) Muricauda ruestringensis DSM 13258 11056175 YP_004789762.1 CDS Murru_3323 NC_015945.1 3654709 3654924 R PFAM: Helix-turn-helix; TIGRFAM: transcriptional regulator, y4mF family; InterPro IPR001387; KEGG: lpn:lpg2377 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; helix-turn-helix domain-containing protein complement(3654709..3654924) Muricauda ruestringensis DSM 13258 11056176 YP_004789763.1 CDS Murru_3324 NC_015945.1 3655335 3655517 R hypothetical protein complement(3655335..3655517) Muricauda ruestringensis DSM 13258 11056177 YP_004789764.1 CDS Murru_3325 NC_015945.1 3655888 3657324 R PFAM: Sodium:sulfate symporter transmembrane region; TIGRFAM: anion transporter; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR001898; KEGG: gfo:GFO_3598 sodium:sulfate symporter; PFAM: Sodium/sulphate symporter; SPTR: Sodium-dependent transporter; TIGRFAM: Sodium/sulphate symporter; anion transporter complement(3655888..3657324) Muricauda ruestringensis DSM 13258 11056178 YP_004789765.1 CDS Murru_3326 NC_015945.1 3657404 3660058 R KEGG: rmr:Rmar_2079 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3657404..3660058) Muricauda ruestringensis DSM 13258 11056179 YP_004789766.1 CDS Murru_3327 NC_015945.1 3660081 3660926 R PFAM: ROK family; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: fbc:FB2170_17456 ROK family protein; PFAM: ROK; SPTR: ROK family protein; ROK family protein complement(3660081..3660926) Muricauda ruestringensis DSM 13258 11056180 YP_004789767.1 CDS Murru_3328 NC_015945.1 3660926 3662182 R PFAM: Major Facilitator Superfamily; COGs: COG0738 Fucose permease; InterPro IPR011701; KEGG: dfe:Dfer_4329 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Glucose/galactose transporter; major facilitator superfamily protein complement(3660926..3662182) Muricauda ruestringensis DSM 13258 11056181 YP_004789768.1 CDS Murru_3329 NC_015945.1 3662234 3663121 R PFAM: GlcNAc-PI de-N-acetylase; COGs: COG2120 conserved hypothetical protein LmbE homologs; InterPro IPR003737; KEGG: rmr:Rmar_1217 LmbE family protein; PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; SPTR: Putative uncharacterized protein; LmbE family protein complement(3662234..3663121) Muricauda ruestringensis DSM 13258 11056182 YP_004789769.1 CDS Murru_3330 NC_015945.1 3663316 3664695 R PFAM: SusD family; InterPro IPR012944; KEGG: rmr:Rmar_2081 RagB/SusD domain protein; PFAM: RagB/SusD; SPTR: Putative outer membrane protein, probably involved in nutrient binding; RagB/SusD domain-containing protein complement(3663316..3664695) Muricauda ruestringensis DSM 13258 11056183 YP_004789770.1 CDS Murru_3331 NC_015945.1 3664713 3668237 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR012910:IPR000531; KEGG: rmr:Rmar_2082 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein, probably involved in nutrient binding; TonB-dependent receptor plug complement(3664713..3668237) Muricauda ruestringensis DSM 13258 11056184 YP_004789771.1 CDS Murru_3332 NC_015945.1 3668299 3669477 R PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: fjo:Fjoh_2007 anti-FecI sigma factor, FecR; PFAM: FecR protein; SPTR: Putative anti-sigma factor; anti-FecI sigma factor FecR complement(3668299..3669477) Muricauda ruestringensis DSM 13258 11056185 YP_004789772.1 CDS Murru_3333 NC_015945.1 3669627 3670181 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR014284:IPR014327:IPR007627:IPR013249:IPR 000792; KEGG: zpr:ZPR_0388 ECF subfamily RNA polymerase sigma-24 factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SMART: Transcription regulator LuxR, C-terminal; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(3669627..3670181) Muricauda ruestringensis DSM 13258 11056186 YP_004789773.1 CDS Murru_3335 NC_015945.1 3671853 3674237 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: gfo:GFO_1311 TonB-dependent outer membrane receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: TonB-dependent outer membrane receptor; TonB-dependent receptor 3671853..3674237 Muricauda ruestringensis DSM 13258 11056188 YP_004789774.1 CDS Murru_3336 NC_015945.1 3674257 3675396 D COGs: COG3182 Uncharacterized iron-regulated membrane protein; InterPro IPR005625; KEGG: zpr:ZPR_4048 putative sulfite reductase flavoprotein component; PFAM: PepSY-associated TM helix; SPTR: Putative sulfite reductase flavoprotein component; PepSY-associated TM helix domain-containing protein 3674257..3675396 Muricauda ruestringensis DSM 13258 11056189 YP_004789775.1 CDS Murru_3337 NC_015945.1 3675494 3675700 R KEGG: pin:Ping_1936 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; hypothetical protein complement(3675494..3675700) Muricauda ruestringensis DSM 13258 11056190 YP_004789776.1 CDS Murru_3339 NC_015945.1 3676618 3677436 R KEGG: cat:CA2559_05120 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3676618..3677436) Muricauda ruestringensis DSM 13258 11056192 YP_004789777.1 CDS Murru_3341 NC_015945.1 3677763 3679574 R PFAM: Sodium:solute symporter family; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: fbc:FB2170_06235 sodium/glucose cotransporter; PFAM: Sodium/solute symporter; SPTR: Sodium/glucose cotransporter; Na+/solute symporter complement(3677763..3679574) Muricauda ruestringensis DSM 13258 11056194 YP_004789778.1 CDS Murru_3342 NC_015945.1 3679718 3680524 R PFAM: Endonuclease/Exonuclease/phosphatase family; COGs: COG3568 Metal-dependent hydrolase; InterPro IPR005135; KEGG: rba:RB8407 hypothetical protein; PFAM: Endonuclease/exonuclease/phosphatase; SPTR: Probable secreted protein; endonuclease/exonuclease/phosphatase complement(3679718..3680524) Muricauda ruestringensis DSM 13258 11056195 YP_004789779.1 CDS Murru_3343 NC_015945.1 3680528 3683920 R PFAM: Domain of Unknown Function (DUF1080); InterPro IPR010496; KEGG: dfe:Dfer_2976 protein of unknown function DUF1080; PFAM: Protein of unknown function DUF1080; SPTR: Putative uncharacterized protein; hypothetical protein complement(3680528..3683920) Muricauda ruestringensis DSM 13258 11056196 YP_004789780.1 CDS Murru_3344 NC_015945.1 3684036 3685292 R PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: phe:Phep_2673 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: NADH-dependent dehydrogenase; oxidoreductase domain-containing protein complement(3684036..3685292) Muricauda ruestringensis DSM 13258 11056197 YP_004789781.1 CDS Murru_3345 NC_015945.1 3685463 3687787 R InterPro IPR006558; KEGG: pdi:BDI_2626 hypothetical protein; SMART: LamG-like jellyroll fold; SPTR: Putative uncharacterized protein; LamG domain-containing protein jellyroll fold domain-containing protein complement(3685463..3687787) Muricauda ruestringensis DSM 13258 11056198 YP_004789782.1 CDS Murru_3346 NC_015945.1 3687918 3689363 R PFAM: Sugar (and other) transporter; TIGRFAM: MFS transporter, sugar porter (SP) family; InterPro IPR005828:IPR003663; KEGG: pjd:Pjdr2_1340 sugar transporter; PFAM: General substrate transporter; SPTR: Arabinose-proton symporter; TIGRFAM: Sugar/inositol transporter; sugar transporter complement(3687918..3689363) Muricauda ruestringensis DSM 13258 11056199 YP_004789783.1 CDS Murru_3347 NC_015945.1 3689356 3690573 R PFAM: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); COGs: COG2942 N-acyl-D-glucosamine 2-epimerase; InterPro IPR010819; KEGG: fbc:FB2170_03930 N-acyl-D-glucosamine 2-epimerase; PFAM: N-acylglucosamine 2-epimerase; PRIAM: N-acylglucosamine 2-epimerase; SPTR: N-acyl-D-glucosamine 2-epimerase; N-acylglucosamine 2-epimerase complement(3689356..3690573) Muricauda ruestringensis DSM 13258 11056200 YP_004789784.1 CDS Murru_3348 NC_015945.1 3690598 3692745 R KEGG: phe:Phep_2992 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3690598..3692745) Muricauda ruestringensis DSM 13258 11056201 YP_004789785.1 CDS Murru_3349 NC_015945.1 3692907 3694667 R PFAM: SusD family; InterPro IPR012944; KEGG: bfs:BF3306 hypothetical protein; PFAM: RagB/SusD; SPTR: Putative outer membrane protein probably involved in nutrient binding; RagB/SusD domain-containing protein complement(3692907..3694667) Muricauda ruestringensis DSM 13258 11056202 YP_004789786.1 CDS Murru_3350 NC_015945.1 3694682 3698128 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Secretin and TonB N terminus short domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; InterPro IPR011662:IPR012910:IPR000531; KEGG: bfs:BF4256 putative outer membrane protein; PFAM: TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug domain protein; TonB-dependent receptor plug complement(3694682..3698128) Muricauda ruestringensis DSM 13258 11056203 YP_004789787.1 CDS Murru_3351 NC_015945.1 3698277 3699482 R PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: gfo:GFO_1261 FecR family protein; PFAM: FecR protein; SPTR: FecR family protein; anti-FecI sigma factor FecR complement(3698277..3699482) Muricauda ruestringensis DSM 13258 11056204 YP_004789788.1 CDS Murru_3352 NC_015945.1 3699555 3700133 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterProIPR007627:IPR013249:IPR000792:IPR014284:IPR 014327; KEGG: bth:BT_3277 RNA polymerase ECF-type sigma factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2; SMART: Transcription regulator LuxR, C-terminal; SPTR: RNA polymerase ECF-type sigma factor; TIGRFAM: RNA polymerase sigma-70, Bacteroidetes type; RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit complement(3699555..3700133) Muricauda ruestringensis DSM 13258 11056205 YP_004789789.1 CDS Murru_3353 NC_015945.1 3700195 3700572 R hypothetical protein complement(3700195..3700572) Muricauda ruestringensis DSM 13258 11056206 YP_004789790.1 CDS Murru_3354 NC_015945.1 3700679 3701320 R PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: cat:CA2559_01470 DNA-binding response regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SPTR: Putative nitrate/nitrite DNA-binding response regulator; two component LuxR family transcriptional regulator complement(3700679..3701320) Muricauda ruestringensis DSM 13258 11056207 YP_004789791.1 CDS Murru_3355 NC_015945.1 3701313 3703358 R PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: cat:CA2559_01475 histidine kinase sensor protein; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Histidine kinase sensor protein; putative signal transduction histidine kinase complement(3701313..3703358) Muricauda ruestringensis DSM 13258 11056208 YP_004789792.1 CDS Murru_3356 NC_015945.1 3703472 3704374 R PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: gfo:GFO_1837 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein complement(3703472..3704374) Muricauda ruestringensis DSM 13258 11056209 YP_004789793.1 CDS Murru_3357 NC_015945.1 3704384 3709246 R InterPro IPR000601; KEGG: cat:CA2559_01455 cell wall associated biofilm protein; PFAM: PKD domain; SPTR: Cell wall associated biofilm protein; PKD domain-containing protein complement(3704384..3709246) Muricauda ruestringensis DSM 13258 11056210 YP_004789794.1 CDS Murru_3358 NC_015945.1 3709703 3711670 D PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase, putative, Aquifex type; COGs: COG1048 Aconitase A; InterPro IPR001030:IPR000573:IPR006250; KEGG: rbi:RB2501_12277 aconitate hydratase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel; SPTR: Aconitate hydratase; TIGRFAM: Aconitase, putative; aconitate hydratase 3709703..3711670 Muricauda ruestringensis DSM 13258 11056211 YP_004789795.1 CDS Murru_3359 NC_015945.1 3711791 3713248 R PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1538 Outer membrane protein; InterPro IPR003423:IPR010131; KEGG: zpr:ZPR_1960 outer membrane efflux family protein; PFAM: Outer membrane efflux protein; SPTR: RND efflux system, outer membrane lipoprotein, NodT; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; NodT family RND efflux system outer membrane lipoprotein complement(3711791..3713248) Muricauda ruestringensis DSM 13258 11056212 YP_004789796.1 CDS Murru_3360 NC_015945.1 3713208 3716477 R PFAM: AcrB/AcrD/AcrF family; TIGRFAM: The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036:IPR004764; KEGG: fjo:Fjoh_4408 hydrophobe/amphiphile efflux-1 (HAE1) family protein; PFAM: Acriflavin resistance protein; SPTR: HAE1 efflux family protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; hydrophobe/amphiphile efflux-1 (HAE1) family transporter complement(3713208..3716477) Muricauda ruestringensis DSM 13258 11056213 YP_004789797.1 CDS Murru_3361 NC_015945.1 3716498 3717580 R PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: dfe:Dfer_0982 efflux transporter, RND family, MFP subunit; PFAM: Secretion protein HlyD; SPTR: Secretion protein HlyD; TIGRFAM: Secretion protein HlyD; RND family efflux transporter MFP subunit complement(3716498..3717580) Muricauda ruestringensis DSM 13258 11056214 YP_004789798.1 CDS Murru_3362 NC_015945.1 3717729 3718130 R hypothetical protein complement(3717729..3718130) Muricauda ruestringensis DSM 13258 11056215 YP_004789799.1 CDS Murru_3363 NC_015945.1 3718529 3721936 D PFAM: Cytochrome c; TIGRFAM: putative membrane-bound dehydrogenase domain; putative heme-binding domain, Pirellula/Verrucomicrobium type; COGs: COG1413 FOG: HEAT repeat; InterPro IPR004155:IPR013427; KEGG: fbc:FB2170_15793 hypothetical protein; PFAM: PBS lyase HEAT-like repeat; SPTR: Putative uncharacterized protein; TIGRFAM: Haem-binding domain, putative; heme-binding protein 3718529..3721936 Muricauda ruestringensis DSM 13258 11056216 YP_004789800.1 CDS Murru_3364 NC_015945.1 3722042 3723376 R PFAM: Fibronectin type III domain; InterPro IPR003961; KEGG: hoh:Hoch_5795 hypothetical protein; PFAM: Fibronectin, type III; SMART: Fibronectin, type III; SPTR: Putative uncharacterized protein; fibronectin type III domain-containing protein complement(3722042..3723376) Muricauda ruestringensis DSM 13258 11056217 YP_004789801.1 CDS Murru_3365 NC_015945.1 3723437 3724990 R PFAM: D-aminoacylase, C-terminal region; COGs: COG3653 N-acyl-D-aspartate/D-glutamate deacylase; InterPro IPR006680; KEGG: fbc:FB2170_04920 amidohydrolase family protein; PFAM: Amidohydrolase 1; PRIAM: N-acyl-D-amino-acid deacylase; SPTR: Amidohydrolase family protein; N-acyl-D-amino-acid deacylase complement(3723437..3724990) Muricauda ruestringensis DSM 13258 11056218 YP_004789802.1 CDS Murru_3366 NC_015945.1 3725098 3726261 R SPTR: Extracellular nuclease; hypothetical protein complement(3725098..3726261) Muricauda ruestringensis DSM 13258 11056219 YP_004789803.1 CDS Murru_3367 NC_015945.1 3726281 3727897 R KEGG: fbc:FB2170_02550 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3726281..3727897) Muricauda ruestringensis DSM 13258 11056220 YP_004789804.1 CDS Murru_3368 NC_015945.1 3727919 3731323 R PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; TIGRFAM: TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region; TonB-linked outer membrane protein, SusC/RagA family; COGs: COG1629 Outer membrane receptor protein mostly Fe transport; InterPro IPR012910:IPR000531; KEGG: rbi:RB2501_09830 hypothetical protein; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: Putative outer membrane protein probably involved in nutrient binding; TonB-dependent receptor plug complement(3727919..3731323) Muricauda ruestringensis DSM 13258 11056221 YP_004789805.1 CDS Murru_3369 NC_015945.1 3731491 3732639 R PFAM: FecR protein; COGs: COG3712 Fe2+-dicitrate sensor membrane component; InterPro IPR006860; KEGG: zpr:ZPR_0224 putative anti-sigma factor; PFAM: FecR protein; SPTR: Putative anti-sigma factor; anti-FecI sigma factor FecR complement(3731491..3732639) Muricauda ruestringensis DSM 13258 11056222 YP_004789806.1 CDS Murru_3370 NC_015945.1 3732743 3733291 D PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma-70 factor, Bacteroides expansion family 1; COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: zpr:ZPR_0388 ECF subfamily RNA polymerase sigma-24 factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; ECF subfamily RNA polymerase sigma-24 subunit 3732743..3733291 Muricauda ruestringensis DSM 13258 11056223 YP_004789807.1 CDS Murru_3371 NC_015945.1 3733414 3733989 D PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family; COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR002818:IPR006286; KEGG: maq:Maqu_2946 PfpI family intracellular peptidase; PFAM: ThiJ/PfpI; SPTR: ThiJ/PfpI family protein; TIGRFAM: Peptidase C56, PfpI; Pfpi family intracellular protease 3733414..3733989 Muricauda ruestringensis DSM 13258 11056224 YP_004789808.1 CDS Murru_3372 NC_015945.1 3734211 3734327 R hypothetical protein complement(3734211..3734327) Muricauda ruestringensis DSM 13258 11056225 YP_004789809.1 CDS Murru_3373 NC_015945.1 3734367 3736745 D PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; InterPro IPR012910:IPR000531; KEGG: fbc:FB2170_11121 putative outer membrane protein; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SPTR: Outer membrane protein; TonB-dependent receptor 3734367..3736745 Muricauda ruestringensis DSM 13258 11056226 YP_004789810.1 CDS Murru_3374 NC_015945.1 3736750 3737592 D KEGG: fbc:FB2170_11126 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3736750..3737592 Muricauda ruestringensis DSM 13258 11056227 YP_004789811.1 CDS Murru_3375 NC_015945.1 3737673 3738020 D PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; TIGRFAM: ModE molybdate transport repressor domain; COGs: COG2005 N-terminal domain of molybdenum-binding protein; InterPro IPR000847; KEGG: dfe:Dfer_5342 putative transcriptional regulator, ModE family; PFAM: HTH transcriptional regulator, LysR; SPTR: Putative transcriptional regulator, ModE family; putative ModE family transcriptional regulator 3737673..3738020 Muricauda ruestringensis DSM 13258 11056228 YP_004789812.1 CDS Murru_3376 NC_015945.1 3738017 3738772 R PFAM: Sulfite exporter TauE/SafE; InterPro IPR002781; KEGG: gfo:GFO_0456 hypothetical protein; PFAM: Protein of unknown function DUF81; SPTR: Membrane protein; hypothetical protein complement(3738017..3738772) Muricauda ruestringensis DSM 13258 11056229 YP_004789813.1 CDS Murru_3377 NC_015945.1 3738776 3739942 R PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain; COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR005110:IPR001453:IPR005111:IPR020817; KEGG: gfo:GFO_0455 molybdopterin biosynthesis protein MoeA; PFAM: MoeA, N-terminal and linker domain; Molybdopterin binding; MoeA, C-terminal, domain IV; SMART: Molybdopterin binding; SPTR: Molybdopterin biosynthesis protein moeA; TIGRFAM: Molybdenum cofactor synthesis; molybdenum cofactor synthesis domain-containing protein complement(3738776..3739942) Muricauda ruestringensis DSM 13258 11056230 YP_004789814.1 CDS Murru_3378 NC_015945.1 3739942 3740934 R PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial; COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterPro IPR007197:IPR010505:IPR006638:IPR013483; KEGG: gfo:GFO_0454 molybdopterin biosynthesis MoaA protein; PFAM: Radical SAM; Molybdenum cofactor synthesis C-terminal; SMART: Elongator protein 3/MiaB/NifB; SPTR: Molybdopterin biosynthesis MoaA protein; TIGRFAM: Molybdenum cofactor biosynthesis protein A; molybdenum cofactor biosynthesis protein A complement(3739942..3740934) Muricauda ruestringensis DSM 13258 11056231 YP_004789815.1 CDS Murru_3379 NC_015945.1 3740927 3741823 R PFAM: MoaC family; Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC; molybdenum cofactor synthesis domain; COGs: COG0315 Molybdenum cofactor biosynthesis enzyme; InterPro IPR002820:IPR001453:IPR020817; KEGG: gfo:GFO_0453 bifunctional molybdenum cofactor biosynthesis protein MoaC/MogA; PFAM: Molybdopterin cofactor biosynthesis C (MoaC) domain; Molybdopterin binding; SMART: Molybdopterin binding; SPTR: Molybdenum cofactor biosynthesis bifunctional protein; TIGRFAM: Molybdenum cofactor synthesis; molybdenum cofactor synthesis domain-containing protein complement(3740927..3741823) Muricauda ruestringensis DSM 13258 11056232 YP_004789816.1 CDS Murru_3380 NC_015945.1 3741824 3742267 R PFAM: MoaE protein; COGs: COG0314 Molybdopterin converting factor large subunit; InterPro IPR003448; KEGG: gfo:GFO_0452 molybdopterin converting factor subunit 2; PFAM: Molybdopterin biosynthesis MoaE; SPTR: Molybdopterin converting factor subunit 2; molybdopterin biosynthesis protein MoaE complement(3741824..3742267) Muricauda ruestringensis DSM 13258 11056233 YP_004789817.1 CDS Murru_3381 NC_015945.1 3742260 3743273 R PFAM: MoeZ/MoeB domain; Rhodanese-like domain; ThiF family; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594:IPR007901; KEGG: gfo:GFO_0451 molybdenum cofactor biosynthesis protein; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; SPTR: Molybdenum cofactor biosynthesis protein; UBA/THIF-type NAD/FAD binding protein complement(3742260..3743273) Muricauda ruestringensis DSM 13258 11056234 YP_004789818.1 CDS Murru_3382 NC_015945.1 3743270 3743506 R PFAM: ThiS family; InterPro IPR003749; KEGG: gfo:GFO_0450 molybdopterin cofactor biosynthesis protein; PFAM: ThiamineS; SPTR: Molybdopterin cofactor biosynthesis protein; sulfur carrier protein ThiS complement(3743270..3743506) Muricauda ruestringensis DSM 13258 11056235 YP_004789819.1 CDS Murru_3383 NC_015945.1 3743503 3744108 R PFAM: Uncharacterized protein family UPF0007; COGs: COG2068 Uncharacterized MobA-related protein; InterPro IPR001228; KEGG: gfo:GFO_0449 MobA-like molybdenum cofactor biosynthesis protein; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; SPTR: MobA-like molybdenum cofactor biosynthesis protein; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase complement(3743503..3744108) Muricauda ruestringensis DSM 13258 11056236 YP_004789820.1 CDS Murru_3384 NC_015945.1 3744105 3745259 R PFAM: XdhC and CoxI family; COGs: COG1975 Xanthine and CO dehydrogenase maturation factor XdhC/CoxF family; InterPro IPR003777; KEGG: gfo:GFO_0448 XdhC/CoxI type molybdenum-dependent oxidoreductase accessory protein; PFAM: XdhC- CoxI; PRIAM: Xanthine dehydrogenase; SPTR: XdhC/CoxI type molybdenum-dependent oxidoreductase accessory protein; xanthine dehydrogenase complement(3744105..3745259) Muricauda ruestringensis DSM 13258 11056237 YP_004789821.1 CDS Murru_3385 NC_015945.1 3745256 3746410 R PFAM: Aminotransferase class-V; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: gfo:GFO_0447 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Cysteine desulfurase; cysteine desulfurase complement(3745256..3746410) Muricauda ruestringensis DSM 13258 11056238 YP_004789822.1 CDS Murru_3386 NC_015945.1 3746562 3746891 D PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: cat:CA2559_00475 transcriptional regulator, ArsR family protein; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family protein; regulatory protein ArsR 3746562..3746891 Muricauda ruestringensis DSM 13258 11056239 YP_004789823.1 CDS Murru_3387 NC_015945.1 3746940 3747407 D KEGG: cat:CA2559_00480 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3746940..3747407 Muricauda ruestringensis DSM 13258 11056240 YP_004789824.1 CDS Murru_3388 NC_015945.1 3747707 3748324 D KEGG: fjo:Fjoh_3082 protein tyrosine phosphatase; SPTR: Probable arsenate reductase; protein tyrosine phosphatase 3747707..3748324 Muricauda ruestringensis DSM 13258 11056241 YP_004789825.1 CDS Murru_3389 NC_015945.1 3748324 3749376 D PFAM: Sodium Bile acid symporter family; TIGRFAM: arsenical-resistance protein; COGs: COG0798 Arsenite efflux pump ACR3 and related permease; InterPro IPR002657:IPR004706; KEGG: cat:CA2559_00490 arsenical-resistance protein; PFAM: Bile acid:sodium symporter; SPTR: Arsenite efflux transporter; TIGRFAM: Arsenical-resistance protein ACR3; arsenical-resistance protein 3748324..3749376 Muricauda ruestringensis DSM 13258 11056242 YP_004789826.1 CDS Murru_3390 NC_015945.1 3749455 3750399 D PFAM: WD40-like Beta Propeller Repeat; COGs: COG0823 Periplasmic component of the Tol biopolymer transport system; InterPro IPR011659; KEGG: rbi:RB2501_12022 TolB protein; PFAM: WD40-like Beta Propeller; SPTR: TolB protein; WD40-like beta Propeller containing protein 3749455..3750399 Muricauda ruestringensis DSM 13258 11056243 YP_004789827.1 CDS Murru_3391 NC_015945.1 3750410 3750703 R hypothetical protein complement(3750410..3750703) Muricauda ruestringensis DSM 13258 11056244 YP_004789828.1 CDS Murru_3392 NC_015945.1 3750899 3751843 D KEGG: rbi:RB2501_14159 putative lipoprotein; SPTR: Probable lipoprotein; putative lipoprotein 3750899..3751843 Muricauda ruestringensis DSM 13258 11056245 YP_004789829.1 CDS Murru_3393 NC_015945.1 3752058 3753248 R PFAM: Redoxin; InterPro IPR000866; KEGG: phe:Phep_1078 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; alkyl hydroperoxide reductase complement(3752058..3753248) Muricauda ruestringensis DSM 13258 11056246 YP_004789830.1 CDS Murru_3394 NC_015945.1 3753393 3753776 D InterPro IPR011637; KEGG: sli:Slin_2514 hypothetical protein; PFAM: Uncharacterised protein family YphA; SPTR: Putative uncharacterized protein; DoxX family protein 3753393..3753776 Muricauda ruestringensis DSM 13258 11056247 YP_004789831.1 CDS Murru_3395 NC_015945.1 3753924 3754715 D hypothetical protein 3753924..3754715 Muricauda ruestringensis DSM 13258 11056248 YP_004789832.1 CDS Murru_3396 NC_015945.1 3754948 3755298 D PFAM: Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; export-related chaperone CsaA; COGs: COG0073 EMAP domain; InterPro IPR002547:IPR008231; KEGG: chu:CHU_3785 methionine--tRNA ligase (methionine tRNA synthetase); PFAM: tRNA-binding domain; SPTR: Methionine--tRNA ligase (Methionine tRNA synthetase); TIGRFAM: Secretion chaperone CsaA; export-related chaperone CsaA 3754948..3755298 Muricauda ruestringensis DSM 13258 11056249 YP_004789833.1 CDS Murru_3398 NC_015945.1 3755657 3757153 R PFAM: Sulfate transporter family; STAS domain; COGs: COG0659 Sulfate permease and related transporter (MFS superfamily); InterPro IPR011547; KEGG: cat:CA2559_12953 sulfate permease family protein; PFAM: Sulphate transporter; SPTR: Sulfate permease family protein; sulfate transporter complement(3755657..3757153) Muricauda ruestringensis DSM 13258 11056251 YP_004789834.1 CDS Murru_3399 NC_015945.1 3757480 3758952 R PFAM: Sodium/hydrogen exchanger family; TrkA-C domain; COGs: COG3263 NhaP-type Na+/H+ and K+/H+ antiporter with a unique C-terminal domain; InterPro IPR006153:IPR006037; KEGG: rbi:RB2501_13614 cell volume regulation protein CvrA; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, C-terminal; SPTR: Sodium/hydrogen exchanger family/TrkA domain protein; sodium/hydrogen exchanger complement(3757480..3758952) Muricauda ruestringensis DSM 13258 11056252 YP_004789835.1 CDS Murru_3400 NC_015945.1 3759342 3760190 D PFAM: WD40-like Beta Propeller Repeat; InterPro IPR011659; KEGG: rbi:RB2501_14229 OmpA family protein; PFAM: WD40-like Beta Propeller; SPTR: OmpA family protein; WD40-like beta Propeller containing protein 3759342..3760190 Muricauda ruestringensis DSM 13258 11056253 YP_004789836.1 CDS Murru_3401 NC_015945.1 3760867 3761511 D PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789:IPR000792; KEGG: fbc:FB2170_15028 DNA-binding response regulator, LuxR family protein; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SPTR: DNA-binding response regulator, LuxR family protein; two component LuxR family transcriptional regulator 3760867..3761511 Muricauda ruestringensis DSM 13258 11056254 YP_004789837.1 CDS Murru_3402 NC_015945.1 3761638 3763566 R PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; COGs: COG0443 Molecular chaperone; HAMAP: Chaperone DnaK; InterPro IPR013126:IPR012725; KEGG: fbc:FB2170_12941 molecular chaperone DnaK; PFAM: Heat shock protein 70; SPTR: Chaperone protein dnaK; TIGRFAM: Chaperone DnaK; chaperone protein dnaK complement(3761638..3763566) Muricauda ruestringensis DSM 13258 11056255 YP_004789838.1 CDS Murru_3403 NC_015945.1 3763799 3765223 D PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, single chain form; COGs: COG1760 L-serine deaminase; InterPro IPR005131:IPR005130:IPR004644; KEGG: fbc:FB2170_12951 L-serine dehydratase; PFAM: Serine dehydratase-like, alpha subunit; Serine dehydratase beta chain; PRIAM: L-serine ammonia-lyase; SPTR: L-serine dehydratase; TIGRFAM: Iron-sulphur-dependent L-serine dehydratase single chain form; L-serine dehydratase 1 3763799..3765223 Muricauda ruestringensis DSM 13258 11056256 YP_004789839.1 CDS Murru_3404 NC_015945.1 3765220 3765699 R KEGG: fbc:FB2170_13106 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3765220..3765699) Muricauda ruestringensis DSM 13258 11056257 YP_004789840.1 CDS Murru_3405 NC_015945.1 3765770 3766588 D PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; COGs: COG0413 Ketopantoate hydroxymethyltransferase; HAMAP: Ketopantoate hydroxymethyltransferase; InterPro IPR003700; KEGG: fbc:FB2170_13111 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; PRIAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; SPTR: 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3765770..3766588 Muricauda ruestringensis DSM 13258 11056258 YP_004789841.1 CDS Murru_3406 NC_015945.1 3766763 3767488 D PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: fbc:FB2170_13121 putative ribosomal large subunit pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Putative ribosomal large subunit pseudouridine synthase; pseudouridine synthase 3766763..3767488 Muricauda ruestringensis DSM 13258 11056259 YP_004789842.1 CDS Murru_3408 NC_015945.1 3769095 3770342 D PFAM: HMGL-like; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891; KEGG: rbi:RB2501_15799 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; PRIAM: 2-isopropylmalate synthase; SPTR: 2-isopropylmalate synthase; 2-isopropylmalate synthase 3769095..3770342 Muricauda ruestringensis DSM 13258 11056261 YP_004789843.1 CDS Murru_3409 NC_015945.1 3770360 3771478 D PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; HAMAP: Isopropylmalate dehydrogenase; InterPro IPR001804:IPR004429; KEGG: rbi:RB2501_15804 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; PRIAM: 3-isopropylmalate dehydrogenase; SPTR: 3-isopropylmalate dehydrogenase; TIGRFAM: Isopropylmalate dehydrogenase; 3-isopropylmalate dehydrogenase 3770360..3771478 Muricauda ruestringensis DSM 13258 11056262 YP_004789844.1 CDS Murru_3410 NC_015945.1 3771812 3773056 R PFAM: Redoxin; InterPro IPR013740; KEGG: fbc:FB2170_13151 phenylalanyl-tRNA synthetase subunit beta; PFAM: Redoxin; SPTR: Phenylalanyl-tRNA synthetase beta subunit; redoxin domain-containing protein complement(3771812..3773056) Muricauda ruestringensis DSM 13258 11056263 YP_004789845.1 CDS Murru_3411 NC_015945.1 3773186 3775597 D PFAM: tRNA synthetase B5 domain; B3/4 domain; Ferredoxin-fold anticodon binding domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; InterProIPR002547:IPR005146:IPR005147:IPR005121:IPR 004532; KEGG: fbc:FB2170_13156 phenylalanyl-tRNA synthetase subunit beta; PFAM: B3/B4 tRNA-binding domain; tRNA-binding domain; tRNA synthetase, B5; Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding; SMART: B3/B4 tRNA-binding domain; tRNA synthetase, B5; Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding; SPTR: Phenylalanyl-tRNA synthetase beta subunit; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; phenylalanyl-tRNA synthetase subunit beta 3773186..3775597 Muricauda ruestringensis DSM 13258 11056264 YP_004789846.1 CDS Murru_3412 NC_015945.1 3775598 3776128 R PFAM: Fasciclin domain; COGs: COG2335 Secreted and surface protein containing fasciclin-like repeats; InterPro IPR000782; KEGG: fbc:FB2170_13161 hypothetical protein; PFAM: FAS1 domain; SMART: FAS1 domain; SPTR: Putative uncharacterized protein; beta-Ig-H3/fasciclin complement(3775598..3776128) Muricauda ruestringensis DSM 13258 11056265 YP_004789847.1 CDS Murru_3413 NC_015945.1 3776346 3777059 D KEGG: rbi:RB2501_15819 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3776346..3777059 Muricauda ruestringensis DSM 13258 11056266 YP_004789848.1 CDS Murru_3414 NC_015945.1 3777056 3778684 R PFAM: ABC transporter; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439:IPR003593; KEGG: fbc:FB2170_13171 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter ATP-binding protein; ABC transporter-like protein complement(3777056..3778684) Muricauda ruestringensis DSM 13258 11056267 YP_004789849.1 CDS Murru_3415 NC_015945.1 3778838 3780244 D InterPro IPR000866; KEGG: fbc:FB2170_13176 transaldolase; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; SPTR: Transaldolase; alkyl hydroperoxide reductase 3778838..3780244 Muricauda ruestringensis DSM 13258 11056268 YP_004789850.1 CDS Murru_3416 NC_015945.1 3780304 3780960 R PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family; COGs: COG0176 Transaldolase; HAMAP: Transaldolase 3B, putative; InterPro IPR001585:IPR022999:IPR004731; KEGG: fbc:FB2170_13181 transaldolase; PFAM: Transaldolase; SPTR: Probable transaldolase; TIGRFAM: Transaldolase 3A/3B; transaldolase complement(3780304..3780960) Muricauda ruestringensis DSM 13258 11056269 YP_004789851.1 CDS Murru_3417 NC_015945.1 3781000 3781809 R PFAM: short chain dehydrogenase; COGs: COG0300 Short-chain dehydrogenase of various substrate specificities; InterPro IPR002198; KEGG: fbc:FB2170_13186 putative oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: Putative oxidoreductase; short-chain dehydrogenase/reductase SDR complement(3781000..3781809) Muricauda ruestringensis DSM 13258 11056270 YP_004789852.1 CDS Murru_3418 NC_015945.1 3782265 3783308 D PFAM: Glutamine cyclotransferase; COGs: COG3823 Glutamine cyclotransferase; InterPro IPR007788; KEGG: fbc:FB2170_13191 glutamine cyclotransferase; PFAM: Glutamine cyclotransferase; SPTR: Glutamine cyclotransferase; glutamine cyclotransferase 3782265..3783308 Muricauda ruestringensis DSM 13258 11056272 YP_004789853.1 CDS Murru_3419 NC_015945.1 3783308 3783697 D PFAM: Acyl-ACP thioesterase; COGs: COG0824 thioesterase; KEGG: fbc:FB2170_13196 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3783308..3783697 Muricauda ruestringensis DSM 13258 11056273 YP_004789854.1 CDS Murru_3420 NC_015945.1 3783929 3784063 D hypothetical protein 3783929..3784063 Muricauda ruestringensis DSM 13258 11056274 YP_004789855.1 CDS Murru_3421 NC_015945.1 3784067 3785317 D KEGG: zpr:ZPR_1052 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3784067..3785317 Muricauda ruestringensis DSM 13258 11056275 YP_004789856.1 CDS Murru_3422 NC_015945.1 3785366 3787303 D KEGG: coc:Coch_0510 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3785366..3787303 Muricauda ruestringensis DSM 13258 11056276 YP_004789857.1 CDS Murru_3423 NC_015945.1 3787305 3788486 D KEGG: bca:BCE_3220 sterol-regulatory element binding protein (SREBP) site 2 protease family protein; SPTR: Putative uncharacterized protein; hypothetical protein 3787305..3788486 Muricauda ruestringensis DSM 13258 11056277 YP_004789858.1 CDS Murru_3424 NC_015945.1 3788458 3789225 D KEGG: fbc:FB2170_16601 putative outer membrane protein; SPTR: Putative uncharacterized protein; putative outer membrane protein 3788458..3789225 Muricauda ruestringensis DSM 13258 11056278 YP_004789859.1 CDS Murru_3425 NC_015945.1 3789740 3790474 D PFAM: Response regulator receiver domain; LytTr DNA-binding domain; COGs: COG3279 Response regulator of the LytR/AlgR family; InterPro IPR007492; KEGG: fbc:FB2170_13216 LytTr DNA-binding response regulator; PFAM: LytTr, DNA-binding domain; SMART: LytTr, DNA-binding domain; SPTR: LytTr DNA-binding response regulator; LytTR family two component transcriptional regulator 3789740..3790474 Muricauda ruestringensis DSM 13258 11056279 YP_004789860.1 CDS Murru_3426 NC_015945.1 3790613 3790786 D hypothetical protein 3790613..3790786 Muricauda ruestringensis DSM 13258 11056280 YP_004789861.1 CDS Murru_3427 NC_015945.1 3791147 3793207 D PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG4585 Signal transduction histidine kinase; InterPro IPR003594; KEGG: fbc:FB2170_13226 putative transmembrane protein; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; SPTR: Putative transmembrane protein; putative signal transduction histidine kinase 3791147..3793207 Muricauda ruestringensis DSM 13258 11056281 YP_004789862.1 CDS Murru_3428 NC_015945.1 3793236 3793904 D PFAM: Response regulator receiver domain; COGs: COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; InterPro IPR001789; KEGG: rbi:RB2501_15869 hypothetical protein; PFAM: Signal transduction response regulator, receiver domain; SPTR: Putative uncharacterized protein; response regulator receiver protein 3793236..3793904 Muricauda ruestringensis DSM 13258 11056282 YP_004789863.1 CDS Murru_3429 NC_015945.1 3794080 3794748 D KEGG: rbi:RB2501_15874 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3794080..3794748 Muricauda ruestringensis DSM 13258 11056283 YP_004789864.1 CDS Murru_3430 NC_015945.1 3794765 3796039 R PFAM: Serine hydroxymethyltransferase; COGs: COG0112 Glycine/serine hydroxymethyltransferase; InterPro IPR001085; KEGG: fbc:FB2170_13241 serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; PRIAM: Glycine hydroxymethyltransferase; SPTR: Serine hydroxymethyltransferase; glycine hydroxymethyltransferase complement(3794765..3796039) Muricauda ruestringensis DSM 13258 11056284 YP_004789865.1 CDS Murru_3431 NC_015945.1 3796294 3797478 D KEGG: fbc:FB2170_13251 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 3796294..3797478 Muricauda ruestringensis DSM 13258 11056285 YP_004789866.1 CDS Murru_3432 NC_015945.1 3797560 3797949 R PFAM: Protein of unknown function (DUF2847); TIGRFAM: bacillithiol system protein YtxJ; KEGG: gfo:GFO_2264 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3797560..3797949) Muricauda ruestringensis DSM 13258 11056286 YP_004789867.1 CDS Murru_3433 NC_015945.1 3798092 3800692 D PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR004176:IPR003959:IPR013093:IPR019489:IPR 003593:IPR017730; KEGG: fbc:FB2170_13261 putative heat shock ClpB protein; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: Putative heat shock ClpB protein; TIGRFAM: Chaperonin ClpB; ATP-dependent chaperone ClpB 3798092..3800692 Muricauda ruestringensis DSM 13258 11056287 YP_004789868.1 CDS Murru_3434 NC_015945.1 3800987 3802300 D PFAM: GntP family permease; TIGRFAM: gluconate transporter; COGs: COG2610 H+/gluconate symporter and related permease; InterPro IPR003474; KEGG: fbc:FB2170_08009 putative gluconate permease; PFAM: Gluconate transporter; SPTR: Putative gluconate permease; TIGRFAM: Gluconate transporter; gluconate transporter 3800987..3802300 Muricauda ruestringensis DSM 13258 11056288 YP_004789869.1 CDS Murru_3435 NC_015945.1 3802312 3802779 D PFAM: Endoribonuclease L-PSP; COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006175; KEGG: fbc:FB2170_08004 putative translation initiation inhibitor; PFAM: Endoribonuclease L-PSP; SPTR: Putative translation initiation inhibitor; endoribonuclease L-PSP 3802312..3802779 Muricauda ruestringensis DSM 13258 11056289 YP_004789870.1 CDS Murru_3436 NC_015945.1 3802789 3803853 D PFAM: Membrane dipeptidase (Peptidase family M19); COGs: COG2355 Zn-dependent dipeptidase microsomal dipeptidase homolog; InterPro IPR008257; KEGG: fbc:FB2170_07994 putative peptidase; PFAM: Peptidase M19, renal dipeptidase; SPTR: Putative peptidase; peptidase M19 3802789..3803853 Muricauda ruestringensis DSM 13258 11056290 YP_004789871.1 CDS Murru_3437 NC_015945.1 3804026 3804640 D PFAM: Bacterial regulatory proteins, tetR family; COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: fbc:FB2170_13266 hypothetical protein; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Putative uncharacterized protein; TetR family transcriptional regulator 3804026..3804640 Muricauda ruestringensis DSM 13258 11056291 YP_004789872.1 CDS Murru_3438 NC_015945.1 3804688 3805125 D PFAM: Acyl-ACP thioesterase; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; COGs: COG0824 thioesterase; InterPro IPR002864; KEGG: ppr:PBPRB1178 putative thioesterase; PFAM: Acyl-ACP thioesterase; SPTR: Putative thioesterase; acyl-ACP thioesterase 3804688..3805125 Muricauda ruestringensis DSM 13258 11056292 YP_004789873.1 CDS Murru_3439 NC_015945.1 3805269 3806672 R PFAM: Protein of unknown function (DUF3308); TIGRFAM: Bacteroidetes-specific putative membrane protein; InterPro IPR019861; KEGG: rbi:RB2501_15909 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP03519, membrane, Bacteroidetes; hypothetical protein complement(3805269..3806672) Muricauda ruestringensis DSM 13258 11056293 YP_004789874.1 CDS Murru_3440 NC_015945.1 3806745 3807269 D PFAM: Phosphoglycerate mutase family; InterPro IPR013078; KEGG: fbc:FB2170_13276 hypothetical protein; PFAM: Histidine phosphatase superfamily, clade-1; SPTR: Putative uncharacterized protein; phosphoglycerate mutase 3806745..3807269 Muricauda ruestringensis DSM 13258 11056294 YP_004789875.1 CDS Murru_3441 NC_015945.1 3807266 3808045 R KEGG: fbc:FB2170_13281 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3807266..3808045) Muricauda ruestringensis DSM 13258 11056295 YP_004789876.1 CDS Murru_3442 NC_015945.1 3808090 3808551 D PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; COGs: COG0691 tmRNA-binding protein; HAMAP: SsrA-binding protein; InterPro IPR000037; KEGG: fbc:FB2170_13286 SsrA-binding protein; PFAM: SsrA-binding protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; SsrA-binding protein 3808090..3808551 Muricauda ruestringensis DSM 13258 11056296 YP_004789877.1 CDS Murru_3443 NC_015945.1 3808999 3809640 R PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; COGs: COG2518 Protein-L-isoaspartate carboxylmethyltransferase; HAMAP: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; InterPro IPR000682; KEGG: fbc:FB2170_13291 hypothetical protein; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; PRIAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; SPTR: Protein-L-isoaspartate O-methyltransferase; TIGRFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; protein-L-isoaspartate O-methyltransferase complement(3808999..3809640) Muricauda ruestringensis DSM 13258 11056297 YP_004789878.1 CDS Murru_3444 NC_015945.1 3809755 3810720 D PFAM: Oxidoreductase family, NAD-binding Rossmann fold; Oxidoreductase family, C-terminal alpha/beta domain; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683:IPR004104; KEGG: fbc:FB2170_13296 Gfo/Idh/MocA family oxidoreductase; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase, Gfo/Idh/MocA family protein; oxidoreductase domain-containing protein 3809755..3810720 Muricauda ruestringensis DSM 13258 11056298 YP_004789879.1 CDS Murru_3445 NC_015945.1 3810779 3811666 D PFAM: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176:IPR006108; KEGG: fbc:FB2170_13301 3-hydroxybutyryl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; PRIAM: 3-hydroxybutyryl-CoA dehydrogenase; SPTR: 3-hydroxybutyryl-CoA dehydrogenase; 3-hydroxybutyryl-CoA dehydrogenase 3810779..3811666 Muricauda ruestringensis DSM 13258 11056299 YP_004789880.1 CDS Murru_3446 NC_015945.1 3811852 3813087 D PFAM: Protein of unknown function (DUF1015); COGs: COG4198 conserved hypothetical protein; InterPro IPR008323; KEGG: fbc:FB2170_13306 hypothetical protein; PFAM: Uncharacterised conserved protein UCP033563; SPTR: Putative uncharacterized protein; hypothetical protein 3811852..3813087 Muricauda ruestringensis DSM 13258 11056300 YP_004789881.1 CDS Murru_3447 NC_015945.1 3813202 3813339 D hypothetical protein 3813202..3813339 Muricauda ruestringensis DSM 13258 11056301 YP_004789882.1 CDS Murru_3448 NC_015945.1 3813385 3814044 D PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family; COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR001608:IPR011078; KEGG: fbc:FB2170_13311 hypothetical protein; PFAM: Alanine racemase, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; hypothetical protein 3813385..3814044 Muricauda ruestringensis DSM 13258 11056302 YP_004789883.1 CDS Murru_3449 NC_015945.1 3814059 3815393 D PFAM: Exonuclease; GIY-YIG catalytic domain; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR013520:IPR000305:IPR006055:IPR006054; KEGG: fbc:FB2170_13316 DNA polymerase III subunit epsilon; PFAM: Exonuclease, RNase T/DNA polymerase III; Excinuclease ABC, C subunit, N-terminal; PRIAM: DNA-directed DNA polymerase; SMART: Exonuclease; Excinuclease ABC, C subunit, N-terminal; SPTR: DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; DNA polymerase III subunit epsilon 3814059..3815393 Muricauda ruestringensis DSM 13258 11056303 YP_004789884.1 CDS Murru_3450 NC_015945.1 3815397 3816245 D PFAM: Ion transport protein; InterPro IPR005821; KEGG: rbi:RB2501_15964 potassium channel protein; PFAM: Ion transport; SPTR: Potassium channel protein; Ion transport protein 3815397..3816245 Muricauda ruestringensis DSM 13258 11056304 YP_004789885.1 CDS Murru_3451 NC_015945.1 3816242 3817165 D PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase; COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA delta(2)-isopentenylpyrophosphate transferase; InterPro IPR002627:IPR018022; KEGG: fbc:FB2170_13326 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; PRIAM: tRNA isopentenyltransferase; SPTR: tRNA dimethylallyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; tRNA dimethylallyltransferase 3816242..3817165 Muricauda ruestringensis DSM 13258 11056305 YP_004789886.1 CDS Murru_3452 NC_015945.1 3817158 3817649 D PFAM: Shikimate kinase; TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; COGs: COG3265 Gluconate kinase; InterPro IPR000623:IPR006001; KEGG: fbc:FB2170_13331 putative D-gluconate kinase; PFAM: Shikimate kinase; PRIAM: Gluconokinase; SPTR: Putative D-gluconate kinase active at low temperature (Idonate catabolism); TIGRFAM: Carbohydrate kinase, thermoresistant glucokinase; thermoresistant glucokinase family carbohydrate kinase 3817158..3817649 Muricauda ruestringensis DSM 13258 11056306 YP_004789887.1 CDS Murru_3453 NC_015945.1 3817705 3818421 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: fbc:FB2170_13336 two-component system transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SPTR: Two-component system, transcriptional regulatory protein; two component winged helix family transcriptional regulator complement(3817705..3818421) Muricauda ruestringensis DSM 13258 11056307 YP_004789888.1 CDS Murru_3454 NC_015945.1 3818431 3820014 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG5002 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: fbc:FB2170_13341 two-component system sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SPTR: Two-component system sensor histidine kinase; integral membrane sensor signal transduction histidine kinase complement(3818431..3820014) Muricauda ruestringensis DSM 13258 11056308 YP_004789889.1 CDS Murru_3455 NC_015945.1 3820079 3820672 R PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; COGs: COG0237 Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; InterPro IPR001977; KEGG: fbc:FB2170_13346 putative dephospho-CoA kinase; PFAM: Dephospho-CoA kinase; PRIAM: Dephospho-CoA kinase; SPTR: Putative dephospho-CoA kinase; TIGRFAM: Dephospho-CoA kinase; dephospho-CoA kinase complement(3820079..3820672) Muricauda ruestringensis DSM 13258 11056309 YP_004789890.1 CDS Murru_3456 NC_015945.1 3820669 3821610 R PFAM: YbbR-like protein; InterPro IPR012505; KEGG: fbc:FB2170_13351 hypothetical protein; PFAM: YbbR-like; SPTR: Putative uncharacterized protein; hypothetical protein complement(3820669..3821610) Muricauda ruestringensis DSM 13258 11056310 YP_004789891.1 CDS Murru_3457 NC_015945.1 3821628 3822629 R PFAM: Glycosyl transferase family 2; COGs: COG1215 Glycosyltransferase probably involved in cell wall biogenesis; InterPro IPR001173; KEGG: fbc:FB2170_13356 glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyltransferase; family 2 glycosyl transferase complement(3821628..3822629) Muricauda ruestringensis DSM 13258 11056311 YP_004789892.1 CDS Murru_3458 NC_015945.1 3822763 3823605 R COGs: COG0623 Enoyl-(acyl-carrier-protein); KEGG: rbi:RB2501_16004 enoyl-[acyl-carrier-protein] reductase; PRIAM: Enoyl-[acyl-carrier-protein] reductase (NADH); SPTR: Enoyl-[acyl-carrier-protein] reductase; enoyl-ACP reductase complement(3822763..3823605) Muricauda ruestringensis DSM 13258 11056312 YP_004789893.1 CDS Murru_3459 NC_015945.1 3823774 3825426 R PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN; COGs: COG0497 ATPase involved in DNA repair; InterPro IPR003395:IPR004604; KEGG: fbc:FB2170_13366 DNA repair protein; PFAM: RecF/RecN/SMC; SPTR: DNA repair protein; TIGRFAM: DNA recombination/repair protein RecN; DNA repair protein RecN complement(3823774..3825426) Muricauda ruestringensis DSM 13258 11056313 YP_004789894.1 CDS Murru_3460 NC_015945.1 3825473 3826363 R KEGG: fbc:FB2170_13371 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3825473..3826363) Muricauda ruestringensis DSM 13258 11056314 YP_004789895.1 CDS Murru_3461 NC_015945.1 3826356 3827561 R PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic; COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR003382:IPR007085:IPR005252; KEGG: fbc:FB2170_13376 flavoprotein; PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein; PRIAM: Phosphopantothenate--cysteine ligase; SPTR: Flavoprotein; TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase complement(3826356..3827561) Muricauda ruestringensis DSM 13258 11056315 YP_004789896.1 CDS Murru_3462 NC_015945.1 3827565 3827891 R PFAM: RNA polymerase Rpb6; KEGG: rbi:RB2501_16024 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3827565..3827891) Muricauda ruestringensis DSM 13258 11056316 YP_004789897.1 CDS Murru_3463 NC_015945.1 3827916 3828749 R TIGRFAM: outer membrane assembly lipoprotein YfiO; COGs: COG4105 DNA uptake lipoprotein; InterPro IPR017689; KEGG: fbc:FB2170_13386 putative lipoprotein; SPTR: Conserved hypothetical lipoprotein; TIGRFAM: Outer membrane assembly lipoprotein YfiO; outer membrane assembly lipoprotein YfiO complement(3827916..3828749) Muricauda ruestringensis DSM 13258 11056317 YP_004789898.1 CDS Murru_3464 NC_015945.1 3828858 3829748 R PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; HAMAP: Dihydrodipicolinate synthase; InterPro IPR002220:IPR005263; KEGG: fps:FP1836 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase; PRIAM: Dihydrodipicolinate synthase; SPTR: Putative dihydrodipicolinate synthase; TIGRFAM: Dihydrodipicolinate synthase subfamily; dihydrodipicolinate synthase complement(3828858..3829748) Muricauda ruestringensis DSM 13258 11056318 YP_004789899.1 CDS Murru_3465 NC_015945.1 3829753 3830286 R KEGG: fbc:FB2170_13396 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3829753..3830286) Muricauda ruestringensis DSM 13258 11056319 YP_004789900.1 CDS Murru_3466 NC_015945.1 3830294 3831115 D PFAM: 5'-nucleotidase, C-terminal domain; COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR008334; KEGG: fbc:FB2170_13401 putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase; PFAM: 5'-Nucleotidase, C-terminal; SPTR: Putative 5'-nucleotidase/2',3'-cyclic phosphodiesterase; 5'-nucleotidase 3830294..3831115 Muricauda ruestringensis DSM 13258 11056320 YP_004789901.1 CDS Murru_3467 NC_015945.1 3831118 3832029 D PFAM: Calcineurin-like phosphoesterase; COGs: COG0737 5'-nucleotidase/2' 3'-cyclic phosphodiesterase and related esterase; InterPro IPR004843:IPR006311; KEGG: fbc:FB2170_13406 putative secreted 5'-nucleotidase; PFAM: Metallo-dependent phosphatase; PRIAM: 5'-nucleotidase; SPTR: Possible secreted 5'-nucleotidase; 5'-nucleotidase 3831118..3832029 Muricauda ruestringensis DSM 13258 11056321 YP_004789902.1 CDS Murru_3468 NC_015945.1 3832877 3834655 R PFAM: Mycoplasma protein of unknown function, DUF285; Cadherin domain; TIGRFAM: bacterial surface protein 26-residue repeat; InterPro IPR002126:IPR005046:IPR011889; KEGG: srm:PSR_61030 conserved hypothetical protein containing fibronectin, type III domain; PFAM: Protein of unknown function DUF285, lipoprotein predicted; Cadherin; SMART: Cadherin; SPTR: Transmembrane protein, putative; TIGRFAM: Bacterial surface protein 26-residue repeat; lipoprotein complement(3832877..3834655) Muricauda ruestringensis DSM 13258 11056322 YP_004789903.1 CDS Murru_3469 NC_015945.1 3834692 3834982 D hypothetical protein 3834692..3834982 Muricauda ruestringensis DSM 13258 11056323 YP_004789904.1 CDS Murru_3470 NC_015945.1 3834972 3835265 R KEGG: fbc:FB2170_13411 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(3834972..3835265) Muricauda ruestringensis DSM 13258 11056324 YP_004789905.1 CDS Murru_3471 NC_015945.1 3835262 3837262 R PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent; COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); HAMAP: NAD-dependent DNA ligase; InterProIPR013839:IPR004150:IPR004149:IPR001357:IPR 001679:IPR013840:IPR003583; KEGG: fbc:FB2170_13426 DNA ligase; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; BRCT; PRIAM: DNA ligase (NAD(+)); SMART: NAD-dependent DNA ligase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; BRCT; SPTR: DNA ligase; TIGRFAM: NAD-dependent DNA ligase; DNA ligase complement(3835262..3837262) Muricauda ruestringensis DSM 13258 11056325 YP_004789906.1 CDS Murru_3472 NC_015945.1 3837259 3838176 R PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific; COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR007848:IPR004556:IPR019874; KEGG: fbc:FB2170_13431 protoporphyrinogen oxidase; PFAM: Methyltransferase small; SPTR: Protoporphyrinogen oxidase; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; protein-(glutamine-N5) methyltransferase complement(3837259..3838176) Muricauda ruestringensis DSM 13258 11056326 YP_004789907.1 CDS Murru_3473 NC_015945.1 3838176 3838661 R PFAM: Acetyltransferase (GNAT) family; InterPro IPR000182; KEGG: fbc:FB2170_13436 histone acetyltransferase HPA2-related acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain; SPTR: Histone acetyltransferase HPA2-related acetyltransferase; N-acetyltransferase GCN5 complement(3838176..3838661) Muricauda ruestringensis DSM 13258 11056327 YP_004789908.1 CDS Murru_3474 NC_015945.1 3838674 3839744 D PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD; COGs: COG0117 Pyrimidine deaminase; InterPro IPR002125:IPR002734:IPR004794; KEGG: fbc:FB2170_13453 putative riboflavin biosynthesis protein; PFAM: CMP/dCMP deaminase, zinc-binding; Bacterial bifunctional deaminase-reductase, C-terminal; PRIAM: Diaminohydroxyphosphoribosylaminopyrimidine deaminase., 5-amino-6-(5-phosphoribosylamino)uracil reductase; SPTR: Putative riboflavin biosynthesis protein; TIGRFAM: Riboflavin biosynthesis protein RibD; riboflavin biosynthesis protein RibD 3838674..3839744 Muricauda ruestringensis DSM 13258 11056328 YP_004789909.1 CDS Murru_3475 NC_015945.1 3839737 3840339 D TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; COGs: COG1011 hydrolase (HAD superfamily); KEGG: fbc:FB2170_13458 putative haloacid dehalogenase-like hydrolase; SPTR: Putative haloacid dehalogenase-type hydrolase; haloacid dehalogenase 3839737..3840339 Muricauda ruestringensis DSM 13258 11056329 YP_004789910.1 CDS Murru_3476 NC_015945.1 3840340 3841203 D PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: fbc:FB2170_13463 hypothetical protein; PFAM: Drug/metabolite transporter; SPTR: Putative uncharacterized protein; hypothetical protein 3840340..3841203 Muricauda ruestringensis DSM 13258 11056330 YP_004789911.1 CDS Murru_3477 NC_015945.1 3841203 3841817 D PFAM: Uncharacterized protein family UPF0029; TIGRFAM: uncharacterized protein, YigZ family; COGs: COG1739 conserved hypothetical protein; InterPro IPR001498; KEGG: fbc:FB2170_13468 hypothetical protein; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; SPTR: Putative uncharacterized protein; hypothetical protein 3841203..3841817 Muricauda ruestringensis DSM 13258 11056331 YP_004789912.1 CDS Murru_3478 NC_015945.1 3841930 3842328 R PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; tol-pal system-associated acyl-CoA thioesterase; COGs: COG0824 thioesterase; InterPro IPR006683:IPR006684; KEGG: fbc:FB2170_13473 thioesterase family protein; PFAM: Thioesterase superfamily; SPTR: Thioesterase family protein; TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; IMG reference gene:2505693348_SP; 4-hydroxybenzoyl-CoA thioesterase complement(3841930..3842328) Muricauda ruestringensis DSM 13258 11056332 Murru_R0001 tRNA Murru_R0001 NC_015945.1 238820 238893 R tRNA-Pro complement(238820..238893) Muricauda ruestringensis DSM 13258 11053040 Murru_R0003 tRNA Murru_R0003 NC_015945.1 423190 423263 D tRNA-Arg 423190..423263 Muricauda ruestringensis DSM 13258 11053229 Murru_R0004 tRNA Murru_R0004 NC_015945.1 489325 489399 R tRNA-Glu complement(489325..489399) Muricauda ruestringensis DSM 13258 11053297 Murru_R0005 tRNA Murru_R0005 NC_015945.1 489471 489545 R tRNA-Glu complement(489471..489545) Muricauda ruestringensis DSM 13258 11053298 Murru_R0007 tRNA Murru_R0007 NC_015945.1 789065 789139 R tRNA-Val complement(789065..789139) Muricauda ruestringensis DSM 13258 11053553 Murru_R0008 tRNA Murru_R0008 NC_015945.1 801274 801348 R tRNA-Val complement(801274..801348) Muricauda ruestringensis DSM 13258 11053567 Murru_R0011 tRNA Murru_R0011 NC_015945.1 818233 818306 R tRNA-Ala complement(818233..818306) Muricauda ruestringensis DSM 13258 11053579 Murru_R0012 tRNA Murru_R0012 NC_015945.1 818474 818550 R tRNA-Ile complement(818474..818550) Muricauda ruestringensis DSM 13258 11053580 Murru_R0014 tRNA Murru_R0014 NC_015945.1 892180 892255 D tRNA-Met 892180..892255 Muricauda ruestringensis DSM 13258 11053645 Murru_R0015 tRNA Murru_R0015 NC_015945.1 983708 983783 D tRNA-Phe 983708..983783 Muricauda ruestringensis DSM 13258 11053717 Murru_R0016 tRNA Murru_R0016 NC_015945.1 1333216 1333292 R tRNA-Ala complement(1333216..1333292) Muricauda ruestringensis DSM 13258 11054044 Murru_R0017 tRNA Murru_R0017 NC_015945.1 1399960 1400036 R tRNA-Met complement(1399960..1400036) Muricauda ruestringensis DSM 13258 11054112 Murru_R0018 tRNA Murru_R0018 NC_015945.1 1432485 1432558 R tRNA-Cys complement(1432485..1432558) Muricauda ruestringensis DSM 13258 11054141 Murru_R0019 tRNA Murru_R0019 NC_015945.1 1711413 1711486 D tRNA-Asn 1711413..1711486 Muricauda ruestringensis DSM 13258 11054402 Murru_R0020 tRNA Murru_R0020 NC_015945.1 1719035 1719106 R tRNA-Arg complement(1719035..1719106) Muricauda ruestringensis DSM 13258 11054411 Murru_R0021 tRNA Murru_R0021 NC_015945.1 1817572 1817656 D tRNA-Leu 1817572..1817656 Muricauda ruestringensis DSM 13258 11054501 Murru_R0022 tRNA Murru_R0022 NC_015945.1 1867193 1867266 R tRNA-Asp complement(1867193..1867266) Muricauda ruestringensis DSM 13258 11054539 Murru_R0023 tRNA Murru_R0023 NC_015945.1 1910456 1910537 D tRNA-Leu 1910456..1910537 Muricauda ruestringensis DSM 13258 11054578 Murru_R0024 tRNA Murru_R0024 NC_015945.1 1975102 1975192 D tRNA-Ser 1975102..1975192 Muricauda ruestringensis DSM 13258 11054635 Murru_R0025 tRNA Murru_R0025 NC_015945.1 2017678 2017749 D tRNA-Gln 2017678..2017749 Muricauda ruestringensis DSM 13258 11054674 Murru_R0026 tRNA Murru_R0026 NC_015945.1 2098497 2098582 R tRNA-Leu complement(2098497..2098582) Muricauda ruestringensis DSM 13258 11054735 Murru_R0027 tRNA Murru_R0027 NC_015945.1 2098960 2099035 R tRNA-Gly complement(2098960..2099035) Muricauda ruestringensis DSM 13258 11054737 Murru_R0028 tRNA Murru_R0028 NC_015945.1 2229531 2229607 D tRNA-Arg 2229531..2229607 Muricauda ruestringensis DSM 13258 11054854 Murru_R0029 tRNA Murru_R0029 NC_015945.1 2362262 2362335 D tRNA-Thr 2362262..2362335 Muricauda ruestringensis DSM 13258 11054991 Murru_R0030 tRNA Murru_R0030 NC_015945.1 2362358 2362443 D tRNA-Tyr 2362358..2362443 Muricauda ruestringensis DSM 13258 11054992 Murru_R0031 tRNA Murru_R0031 NC_015945.1 2362521 2362596 D tRNA-Gly 2362521..2362596 Muricauda ruestringensis DSM 13258 11054993 Murru_R0032 tRNA Murru_R0032 NC_015945.1 2362683 2362757 D tRNA-Thr 2362683..2362757 Muricauda ruestringensis DSM 13258 11054994 Murru_R0033 tRNA Murru_R0033 NC_015945.1 2364063 2364138 D tRNA-Trp 2364063..2364138 Muricauda ruestringensis DSM 13258 11054996 Murru_R0034 tRNA Murru_R0034 NC_015945.1 2442131 2442217 R tRNA-Leu complement(2442131..2442217) Muricauda ruestringensis DSM 13258 11055069 Murru_R0035 tRNA Murru_R0035 NC_015945.1 2447157 2447229 R tRNA-Lys complement(2447157..2447229) Muricauda ruestringensis DSM 13258 11055075 Murru_R0037 tRNA Murru_R0037 NC_015945.1 2467464 2467540 D tRNA-Ile 2467464..2467540 Muricauda ruestringensis DSM 13258 11055097 Murru_R0038 tRNA Murru_R0038 NC_015945.1 2467708 2467781 D tRNA-Ala 2467708..2467781 Muricauda ruestringensis DSM 13258 11055098 Murru_R0042 tRNA Murru_R0042 NC_015945.1 2717166 2717249 D tRNA-Ser 2717166..2717249 Muricauda ruestringensis DSM 13258 11055303 Murru_R0043 tRNA Murru_R0043 NC_015945.1 2717384 2717458 D tRNA-Pro 2717384..2717458 Muricauda ruestringensis DSM 13258 11055304 Murru_R0044 tRNA Murru_R0044 NC_015945.1 3166318 3166394 D tRNA-Arg 3166318..3166394 Muricauda ruestringensis DSM 13258 11055720 Murru_R0045 tRNA Murru_R0045 NC_015945.1 3234985 3235058 R tRNA-Met complement(3234985..3235058) Muricauda ruestringensis DSM 13258 11055782 Murru_R0046 tRNA Murru_R0046 NC_015945.1 3268990 3269063 D tRNA-His 3268990..3269063 Muricauda ruestringensis DSM 13258 11055816 Murru_R0047 tRNA Murru_R0047 NC_015945.1 3650994 3651078 D tRNA-Ser 3650994..3651078 Muricauda ruestringensis DSM 13258 11056170 Murru_R0009 rRNA Murru_R0009 NC_015945.1 814946 815057 R 5S ribosomal RNA complement(814946..815057) Muricauda ruestringensis DSM 13258 11053577 Murru_R0010 rRNA Murru_R0010 NC_015945.1 815187 818010 R 23S ribosomal RNA complement(815187..818010) Muricauda ruestringensis DSM 13258 11053578 Murru_R0013 rRNA Murru_R0013 NC_015945.1 818658 820171 R 16S ribosomal RNA complement(818658..820171) Muricauda ruestringensis DSM 13258 11053581 Murru_R0036 rRNA Murru_R0036 NC_015945.1 2465843 2467356 D 16S ribosomal RNA 2465843..2467356 Muricauda ruestringensis DSM 13258 11055096 Murru_R0039 rRNA Murru_R0039 NC_015945.1 2468004 2470827 D 23S ribosomal RNA 2468004..2470827 Muricauda ruestringensis DSM 13258 11055099 Murru_R0040 rRNA Murru_R0040 NC_015945.1 2470957 2471068 D 5S ribosomal RNA 2470957..2471068 Muricauda ruestringensis DSM 13258 11055100