-- dump date 20120504_152752 -- class Genbank::CDS -- table cds_note -- id note YP_005169477.1 Differs from Rv0001 by 1aa, R156N ,and from Mb0001 by 1aa, V353I en BCG Pasteur, BCG Tokyo y BCG Mexico YP_005169479.1 Differs from Rv0003 by 2aa, V158L, T245I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur,BCG Tokyo and BCG Mexico YP_005169480.1 Differs from Mb0004 by 1aa, S16L in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169481.1 Differs from Rv0005 by 1aa, S442A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169482.1 Differs from Mb0006 by 1aa, D639A, and from Rv0006 by 3aa, Q21E, T95S, D668G in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169483.1 Differs from Mb0007 by 1aa, I272V in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169484.1 Differs from Rv0008c by 1aa, P145S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169486.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base deletion (g-*) leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (111 aa versus 141 aa) YP_005169488.1 Differs from Rv0012 by 2aa, E105K, R233C in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169489.1 Differs from Rv0013 by 1aa, M68I in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169494.1 Differs from Rv0018c by 3aa, L3R, A455S, S463P in Mcobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169496.1 Differs from Mb0020c by 2aa, G47R, Y250H, and from Rv0020c by 3aa, G222D, C298Y, Q378R, and deletion of 6aa (EQRGYP) at position 246 in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169497.1 Differs from Rv0021c by 1aa, P277A in Mcobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169500.1 In Mycobacterium tuberculosis strain H37Rv, and other mycobacteria, Rv0024 exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, a frameshift due to a single base deletion (C-*) splits Rv0024 into 2 parts YP_005169501.1 Differs from Rv0025 by 1aa, L73P in Mcobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169502.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 4 bp insertion (*-ATCG) leads to a longer protein with a different COOH part compared to its homolog in Mycobacterium tuberculosis strain H37Rv (477 aa versus 448 aa). Differs from Rv0026 by 1aa, P93Q in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169505.1 Differs from Rv0029 by 1aa, N190H in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169512.1 Differs from Mb0037c and Rv0036c by 1aa in BCG Pasteur, BCG Tokyo and BCG Mexico, L186P in BCG Pasteur, and at C-terminal end due to frameshift resulting from 1 bp deletion at position Equivalent to Mycobacterium tuberculosis H37Rv, after codon 202 in BCG Pasteur, Tokyo and Mexico YP_005169515.1 Differs from Rv0039c by 1aa, F24C in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169522.1 Differs from Mb0047c by 1aa, T120I, and from Rv0046c by 2aa, T120I, G190R in BCG Pasteur, BCG Tokio and BCG Mexico YP_005169524.1 Differs from Rv0048c by 1aa, A250V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169526.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, insertion of 3 codons after position 632 leads to a slightly longer product compared to its homologs in Mycobacterium tuberculosis strain H37Rv (681 aa versus 678 aa) and Mycobacterium bovis AF2122/97 (681 aa versus 680 aa). In addition, differs from Rv0050 by 1aa, L6P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169534.1 Differs from Rv0058 by 1aa, G552R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169538.1 Differs from Mb0063 by 1aa, A72D, and from Rv0062 by 2aa, A72D, V106I in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169540.1 Differs from Mb0065 by 1aa, T435I, and from Rv0064 by 4aa, T435I, D457G, F550V, P906R in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169541.1 Differs from Rv0064A by 1aa, V48A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169543.1 Differs from Rv0066c by 1aa, N117K in in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur,BCG Tokyo and BCG Mexico YP_005169545.1 Differs from Rv0068 by 1aa, L214V in Mycobacterium bovis, Mycobacterium tuberculosis CDC1551, BCG Pasteur,BCG Tokyo and BCG Mexico YP_005169547.1 Differs from Rv0070c by 1aa, G265E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169548.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 45 bp insertion (5 copies of VDP repeat) leads to longer products compared to its homologs in Mycobacterium tuberculosis strain H37Rv (250 aa versus 235 aa) and Mycobacterium bovis (250 aa versus 238 aa) YP_005169550.1 In Mycobacterium tuberculosis strain H37Rv, Rv0073 exists as a single gene as in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico. In Mycobacterium bovis, a frameshift due to a single base deletion (A-*) splits Rv0073 into 2 parts, Mb0074 and Mb0075 YP_005169552.1 Differs from Rv0075 and Mb0077 by 1aa, G326D in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169555.1 Differs from Rv0078 by 1aa, V113I in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169559.1 Differs from Mb0083 by 1aa, C35R, and from Rv0080 by 2aa, C35R, V60G in BCG Pasteur and BCG Mexico. Differs from Rv0080 by 1aa, V60G in BCG Tokyo YP_005169561.1 Differs from Rv0082 by 1aa, R74Q in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169562.1 In Mycobacterium bovis, a single base transversion (a-t) leads to a slightly longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (642 aa versus 640 aa).Differs from Mb0086 by 1aa, A177V in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169565.1 Differs from Rv0086 by 1aa, T118M in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169566.1 Differs from Rv0087 by 1aa, I230V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur,BCG Tokyo and BCG Mexico YP_005169571.1 Differs from Rv0092 by 1aa, A3T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169572.1 Differs from Rv0093c by 1aa, R22C in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169573.1 Differs from Rv0094c by 3aa, D256E, W296R, K315E in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169574.1 In Mycobacterium tuberculosis strain H37Rv, Rv0095c and Rv1588 exist as separate genes in their respective positions. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a 73 bp substitution leads to a single combined gene. Differs from Rv0095c by 5aa, E57D, T70S, V85A, V91G, A92Q in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169575.1 Differs from Rv0096 by 1aa, W182R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169582.1 Differs from Rv0103c by 1aa, S22L in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169586.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base insertion (*-T) leads to a product with a different COOH part compared to its homolog in Mycobacterium tuberculosis strain H37Rv differs from Rv0107c by 3aa, V136A, P1247S, S1327A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169588.1 Differs from Rv0109 by 1aa, G346R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169593.1 Differs from Rv0114 by 1aa, R121G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169594.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base insertion (*-c) leads to shorter product with a different COOH part compared to its homolog in Mycobacterium tuberculosis strain H37Rv. In addition, in Mycobacterium bovis, a single base insertion leads to a different NH2 part YP_005169597.1 Differs from Rv0118c by 1aa, G224S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169599.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium tuberculosis strain H37Rv, fusA2 exists as a single gene. In Mycobacterium bovis, a frameshift due to a 2bp to 1bp substitution (GC-T), splits fusA2 into 2 parts, fusA2a and fusA2b. Differs from Rv0120c by 2aa, W106R, S562N YP_005169603.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 180 bp insertion leads to a longer product in the 3' direction compared to its homolog in Mycobacterium tuberculosis strain H37Rv (538 aa versus 487 aa) YP_005169606.1 Differs from Rv0127 by 1aa, P18S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169611.1 Differs from Mb0137c by 1aa, E147K in Mycobacterium tuberculosis H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169612.1 In Mycobacterium tuberculosis strain H37Rv, and Mycobacterium bovis AF2122/97, codon 161 is TAC and in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, TAA YP_005169616.1 Differs from Mb0143 by 1aa, D96G in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169617.1 Differs from Mb0144 by 1aa, R227H in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169621.1 Differs from Rv0143c by 1aa, L34F in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169629.1 Differs from Rv0151c by 1aa, R26G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169631.1 Differs from Rv0153c by 1aa, G105D in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169634.1 Differs from Rv0156 by 1aa, C2Y in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169637.1 Differs from Rv0159c by 1aa, T255P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169638.1 Differs from Rv0160c by 2aa, T116A, T211A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169640.1 Differs from Rv0162c and Mb0167c by 1aa, R41H in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169643.1 In Mycobacterium tuberculosis strain H37Rv, Rv0165c exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a frameshift due to a 2bp insertion (*-CC) leads to a product with a different COOH terminus YP_005169644.1 Differs from Rv0166 by 2aa, A123V, A192S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169645.1 In Mycobacterium bovis BCG Mexico a single base transition (G-A) leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (238 aa versus 265 aa) YP_005169647.1 Differs from Rv0169 by 2aa, A313S, S359P. Differs from Rv0169 by 2aa, A313S, S359P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169648.1 Differs from Rv0170 by 1aa, T179I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169649.1 Differs from Rv0171 by 1aa, D212E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169652.1 Differs from Rv0174 by 1aa, P370L in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169654.1 Differs from Mb0182 by 1aa, S285N, and from Rv0176 by 3aa, S285N, S290Q, A291S in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169657.1 Differs from Rv0179c by 1aa, H124R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169664.1 Differs from Mb0192 by 1aa, S504I, and from Rv0186 by 2aa, S504I, R532P in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169665.1 Differs from Rv0187 and Mb0193 by 1aa, V147A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169670.1 In Mycobacterium tuberculosis strain H37Rv, Rv0192 and Rv0192A exist as 2 genes with an overlap region. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base insertion (*-g) leads to a single product. Differs from Mb0198 by 1aa, A279V and from Rv0192 by 2aa, P113S, A279V in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169671.1 Differs from Rv0193c and Mb0199c by 1aa, E417K in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169672.1 Differs from Mb0200 by 1aa, I49V, and from Rv0194 by 2aa, T74M, M223T in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169675.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base transversion (T-G) introduces a stop codon that leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (748 aa versus 762 aa). Differs from Rv0197 by 1aa, S378R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169681.1 Differs from Rv0203 and Mb0209 by 1aa, T88K in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169682.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, the presence of a more likely start codon leads to a longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (427 aa versus 412 aa). Differs from Rv0204c by 1aa, L321V in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169683.1 Differs from Rv0205 by 1aa, R72H in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, Tokyo and BCG Mexico YP_005169684.1 Differs from Rv0206c by 2aa, I384F, E466D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169687.1 Differs from Rv0209 by 1aa, A162V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169688.1 Differs from Rv0210 by 1aa, T486A in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169692.1 Differs from Rv0214 by 1aa, A40G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, Tokyo and BCG Mexico YP_005169693.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a 29 bp insertion leads to a longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (388 aa versus 357 aa). Differs from Mb0221c by 1aa, S361A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169695.1 Differs from Rv0217c by 1aa T184P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169696.1 Differs from Rv0218 by 2aa, R316C, N413D in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169699.1 In Mycobacterium bovis and Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, RD10, a 1902 bp deletion leads to a shorter product with a different COOH part, compared to its homolog in Mycobacterium tuberculosis strain H37Rv (257 aa versus 469 aa). It also leads to the deletion of the next protein, echA1 (Rv0222) in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169700.1 In Mycobacterium bovis strain AF2122/97, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, RD10, a 1902 bp deletion, compared to Mycobacterium tuberculosis H37Rv, truncates Rv0221c and Rv0223c and removes Rv0222c. In Mycobacterium bovis BCG Pasteur and BCG Tokyo, a single base deletion (*-C) splits gene into two parts compared to its homologs in Mycobacterium tuberculosis strain H37Rv and Mycobacterium bovis AF2122/97 (116 aa and 269 aa, versus 487 aa and 385 aa, respectively). Deletion in Mycobacterium bovis, bovis BCG Pasteur, BCG Tokyo and BCG Mexico of region RD10 leads to a different COOH part compared to Mycobacterium tuberculosis strain H37Rv. Maybe pseudogene. YP_005169701.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base deletion(*-C) splits gene into two parts compared to its homologs in Mycobacterium tuberculosis strain H37Rv and Mycobacterium bovis AF2122/97 (116 aa and 269 aa, versus 487 aa and 385 aa, respectively). May be pseudogene YP_005169702.1 Differs from Rv0224c by 1aa, L117F in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169705.1 Differs from Rv0227c by 1aa, R29S, and from Mb0232c by 1aa, S392N in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169708.1 Differs from Rv0230c by 1aa, E199D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169711.1 Differs from Rv0233 by 1aa, D33H in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169714.1 Differs from Rv0236c by 3aa, V412M, A990T, G1080S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169716.1 Differs from Rv0237 by 1aa, L129V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169719.1 Differs from Rv0240 by 1aa, S31A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169723.1 Differs from Mb0250c by 1aa, N503D and from Rv0244c by 3aa, R394K, A479E, N503D in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169725.1 Differs from Mb0252 by 1aa, A129V in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169738.1 Differs from Rv0259c by 1aa, V182A in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169739.1 Response regulator domain protein YP_005169744.1 Differs from Rv0265c and Mb0271c by 1aa, C313Y in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169749.1 Differs from Rv0270 and Mb0276 by 1aa, E112D in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169751.1 Differs from Mb0278c by 1aa, P164L in Mycobacterium tuberculosis H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169754.1 Differs from Rv0275c by 1aa, L24S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169757.1 Differs by 1 aa, Q24* from Rv0227A and Mb0351A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169758.1 In Mycobacterium tuberculosis strain H37Rv, PE_PGRS3 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a large insertion leads to an extra copy of PE_PGRS3. Also, a frameshift due to single base deletion (T-*), splits this extra copy of PE_PGRS3 into 2 parts, PE_PGRS3a and PE_PGRS3b. Also differs from Mb0285c by an insertion of 144bp. YP_005169759.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a insertion of 66 bp lead to a longer product than to the homolog Mycobacterium bovis (899 aa versus 877 aa). In Mycobacterium bovis, 2 deletions, one of 18 bp and the other of 66 bp, and part of a 2780 bp insertion , leads to a shorter product with a different 3' end compared to its homolog in Mycobacterium tuberculosis strain H37Rv (877 aa versus 957 aa) YP_005169760.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, 2 insertion seach of 9 bp and a deletion of 9 bp, lead to a longer product compared to its homolog in Mycobacterium bovis (834 aa versus 831 aa). In Mycobacterium bovis, 2 deletions each of 9 bp , leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (831 aa versus 837 aa) YP_005169761.1 Differs from Rv0280 by 1 aa P337S in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169763.1 Differs from Rv0282 by 1aa, A6E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169771.1 Differs from Rv0290 by 1aa, T400A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169773.1 Differs from Rv0292 by 1aa, D217N in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169774.1 Differs from Rv0293c and Mb0301c by 1aa, S263G in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169778.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a 45 bp in-frame insertion leads to a longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (606 aa versus 591 aa) YP_005169780.1 Differs from Mb0307 by 1aa, S13N in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169783.1 Differs from Mb0310 by 1aa A124V in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169785.1 In Mycobacterium tuberculosis strain H37Rv, PPE5 and PPE6 exist as separate genes. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a frameshift due to a single base deletion (G-*) leads to a shorter CDS (Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico) Equivalent to the 3' end of Rv0304c/PPE5. Differs from Rv0304c by 3aa, S481G, F708S, A955T, and 5 codon in-frame deletion at position 503 in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169786.1 In Mycobacterium tuberculosis strain H37Rv, PPE5 and PPE6 exist as separate genes. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base deletion (T-*) resulting in the absence of a stop codon leads to a longer product. The second part of this CDS shares homology with the 5' end of Rv0304c/PPE5. Differs from Mb0313c by in-frame deletion of 10 codons in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169793.1 Differs from Rv0312 by 2aa, G159S, L563P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169795.1 Differs from Rv0314c by 1aa, A184V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169796.1 Differs from Rv0315 by 1aa, T260K in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169799.1 Differs from Rv0318c by 1aa, A223G in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169802.1 Differs from Rv0321 by 1aa, C183Y in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169804.1 Differs from Rv0323c by 1aa, G142S in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169805.1 Differs from Rv0324 by 1aa, A168T in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169806.1 In Mycobacterium tuberculosis strain H37Rv, Rv0325 and Rv0326 exist as 2 genes. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, the absence of a stop codon between Rv0325 and Rv0326 due to a single base transition (T-C) leads to single product YP_005169807.1 Differs from Rv0327c by 1aa, Y100H in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169809.1 Differs from Rv0329c by 1aa, S129W in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169812.1 Differs from Rv0332 by 1aa, G198E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169815.1 Differs from Rv0335c and Mb0340 by 1aa P131T in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169816.1 Differs from Rv0336 by 1aa, H496P in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169818.1 Differs from Rv0338c by 2aa, G506R, V621A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169822.1 Differs from by 2aa, S88N, Q481H in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169825.1 In Mycobacterium bovis, a frameshift due to a single base deletion (A-*) leads to a shorter product with a different NH2 part compared to its homolog in Mycobacterium tuberculosis strain H37Rv in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169831.1 Differs from Rv0351 by 1aa, L224S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169832.1 Differs from Rv0352 and Mb0360 by 1aa, A280T in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169834.1 In Mycobacterium tuberculosis strain H37Rv, PPE7 and PPE8 exist as 2 genes. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a 2 bp insertion (*-TA) resulting in the absence of a stop codon between the 2 genes, leads to a single product, and an altered C-terminus YP_005169838.1 Differs from Rv0359 by 1aa, T252A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169841.1 Differs from Mb0362 by 1aa, V292A in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169843.1 Differs from Rv0364 by 1aa, L193I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169847.1 Differs from Rv0368c by 1aa, H249R, and from Mb0375c by 1aa, G371S in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169849.1 Differs from Rv0370c by 1aa, E201G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169851.1 Differs from Mb0379c by 1aa, G161S in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169852.1 Differs from Rv0373c by 1aa, S122F in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169856.1 Differs from Rv0377 by 1aa, R302P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169865.1 Differs from Mb0393 by 1aa, D902A in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169866.1 In Mycobacterium tuberculosis strain H37Rv, Rv0388c and Rv0387c exist as 2 separate genes. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, 3 different base substitutions, the first of 14 bases, the second of 8 bases, and lastly of 28 bases, leads to a longer single product. Differs from Mb0394c by 1aa, T361A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169867.1 Differs from Rv0389 by 2aa, G8E, T332I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169870.1 Differs from Rv0392c by 1aa, A241V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169873.1 Differs from Rv0395 by 1aa, A80V in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169881.1 In Mycobacterium tuberculosis strain H37Rv, mmpL1 exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a frameshift due to a single base deletion splits mmpL1 into 2 parts, mmpL1a and mmpL1b YP_005169882.1 In Mycobacterium tuberculosis strain H37Rv, mmpL1 exists as a single gene. In Mycobacterium bovis, a frameshift due to a single base deletion splits mmpL1 into 2 parts, mmpL1a and mmpL1b. Differs from Rv0402c by 1aa, P451L in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169884.1 Differs from Mb0411 by 1aa, S300S, and from Rv0404 by 2aa, A88T, S300A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169885.1 In Mycobacterium tuberculosis strain H37Rv, pks6 exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a frameshift due to single base insertion splits pks6 into 2 parts,pks6a and pks6b YP_005169886.1 In Mycobacterium tuberculosis strain H37Rv, pks6 exists as a single gene. In Mycobacterium bovis, a frameshift due to single base insertion, splits pks6 into 2 parts, pks6a and pks6b. Differs from Mb0413 by 1aa, M921V in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169889.1 Differs from Rv0408 by 1aa, A102G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169893.1 Differs from Rv0412c by 1aa, Y355D in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169896.1 Differs from Mb0423 by 1aa, A158V in Mycobacterium tuberculosis H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169898.1 Differs from Rv0417 by 1aa, C75S in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169900.1 Differs from Rv0419 by 2aa, T73A, T297A, and from Mb0427 by 1aa, T73A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169901.1 Differs from Mb0428c by 1aa, G21E in Mycobacterium tuberculosis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169906.1 Differs from Rv0425c by 1aa, A222E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169909.1 Differs from Rv0428c by 1aa G149D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169910.1 Differs from Mb0437c by 1aa, A2T in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169912.1 Differs from Rv0431 by 2aa, G38V, A87T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169915.1 Differs from Rv0434 by 1aa, A190T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169917.1 Differs from Rv0436c by 1aa, V167G in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169919.1 Differs from Rv0438c by 1aa, I15M in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169923.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base transition creates an in-frame stop at codon 8, leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (479 aa versus 487 aa). Differs from Mb0450c by 1aa, T214K, and from Rv0442c by 2aa, E23K, T214K in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169925.1 Differs from Rv0444c by 2aa, D107G, E184G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169926.1 Differs from Rv0445c and Mb0453c by 1aa, I1M, due to c-t transition at position Equivalent to Mycobacterium tuberculosis strain H37Rv, 534394. Expression may be affected in Mycobacterium bovis BCG Pasteur and BCG Mexico (late strains). YP_005169931.1 Differs from Mb0458c by 1aa, A314T in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169939.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a possible RBS upstream leads to an earlier start resulting in a slightly longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (676 aa versus 673 aa) YP_005169947.1 Differs from Rv0465c by 2aa, D36N, R106C, and from Mb0474c by 1aa, R326Q in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169955.1 Differs from Rv0472c and Mb0482c by 1aa, D162G in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169956.1 Differs from Rv0473 by 1aa, R5K in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169963.1 In Mycobacterium bovis, a 56 bp deletion results in a different NH2 part and leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (311 aa versus 340 aa) YP_005169967.1 Differs from Rv0484c by 1aa, L140I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169973.1 Differs from Rv0490 and Mb0500 by 1aa, S109F in BCG Pasteur, BCG Tokio and BCG Mexico YP_005169974.1 Differs from Rv0491 and Mb0501 by 1aa, T18A in BCG Pasteur and BCG Mexico, by 2aa, T18A, C219R in BCG Tokyo YP_005169975.1 Differs from Rv0492c by 1aa, F520L in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169977.1 Differs from Rv0493c by 1aa, G174S in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico. Also differs from Rv0493c by 1aa, S101G in BCG Mexico YP_005169984.1 Differs from Rv0500 by 1aa, D227E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169992.1 Differs from Mb0519 by 1aa, D119H, and from Rv0507 by 3aa, H426R, Y509D, C722S in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169997.1 Differs from Rv0512 by 1aa, G246E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005169999.1 Differs from Mb0527 and Rv0514 by 1aa, G23A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170002.1 Differs from Rv0517 by 1aa, G394D in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170017.1 In Mycobacterium tuberculosis strain H37Rv, PE_PGRS6 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a single base insertion splits PE_PGRS6 into 2 parts, PE_PGRS6a and PE_PGRS6b, resulting in PE_PGRS6a having a different COOH part. There is also a 84 bp and a 9 bp insertion in PE_PGRS6a YP_005170023.1 Differs from Rv0538 by 1aa, P228R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170026.1 Differs from Rv0541c by 1aa, V226I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170030.1 Differs from Rv0545c by 1aa, S49P in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170034.1 In Mycobacterium tuberculosis strain H37Rv, Rv0549c exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a frameshift due to a single base deletion, splits Rv0549c into 2 parts YP_005170037.1 Differs from Rv0552 and Mb0567 by 1aa, T144I in Mycobacterium bovis BCG Pasteur and BCG Mexico YP_005170041.1 Differs from Rv0556 by 1aa, R15L in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170052.1 Differs from Rv0567 by 1aa, L201F in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170053.1 Differs from Rv0568 and Mb0583 by 1aa, E120G in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170055.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a frameshift due to a single base deletion leads to a product with a different COOH part compared to its homolog in Mycobacterium tuberculosis strain H37Rv YP_005170056.1 Differs from Rv0571c and Mb0586c by 1aa, L258F in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170057.1 Differs from Rv0572c by 1aa, L31F in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170059.1 Differs from Rv0574c by 1aa, K4N in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170060.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a frameshift due to a single base insertion leads to a shorter product with a different COOH part compared to its homolog in Mycobacterium tuberculosis strain H37Rv YP_005170061.1 Differs from Rv0576 by 1aa, H233R in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170063.1 Differs from Rv0578c and from Mb0593c by 3aa, there are deleted in Mycobacterium bovis BCG Pasteur and BCG Mexico YP_005170069.1 Differs from Rv0584 by 1aa G90D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170070.1 Differs from Rv0585c by 1aa V438I and from Mb0600c by 2aa M150I and V438I in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170074.1 Differs from Rv0589 by 1aa S51F in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170075.1 In Mycobacterium tuberculosis strain H37Rv, mce2B and Rv0590A are 2 genes, most likely to be linked. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, an in-frame insertion of a single base leads to a single product YP_005170076.1 Differs from Rv0591 by 2aa M49T and N398T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170077.1 In Mycobacterium tuberculosis strain H37Rv, mce2D exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift occurs in a strech of C (7 for H37Rv, 8 for Mycobactrium bovis and 9 for Mycobacterium bovis BCG). This leads to mceDa genes with different COOH parts and a remnant mc2Db pseudogene YP_005170078.1 In Mycobacterium bovis, a single base transition introducing a stop codon, leads to the formation of a truncated product compared to its homolog in Mycobacterium tuberculosis strain H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico (188 aa versus 402 aa) YP_005170085.1 Second part YP_005170086.1 First part YP_005170087.1 Differs from Rv0602c by 1aa I28V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170088.1 Differs from Mb0619 by 2aa P77A and E96K in Mycobacterium tuberculosis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170089.1 Differs from Rv0604 by 1aa P180S in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170096.1 Differs from Rv0610c by 1aa S103N in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170105.1 In Mycobacterium tuberculosis strain H37Rv, galT is split into 2 parts, galT' and 'galT. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, an in-frame insertion of a single base leads to a single product. Differs from Mb0635 by 1aa R183G and from Rv0619 by 1aa A397T in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170106.1 Differs from Rv0620 by 1aa R199C in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170107.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base transition leads to a longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (385 aa versus 354 aa) YP_005170115.1 Differs from Rv0629c by 1aa A536T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170116.1 In Mycobacterium tuberculosis strain H37Rv, recB exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a single base deletion (G-*) splits recB into 2 parts, recBa and recBb. Differs from Mb0647c by 1aa H514R and from Rv0630c by 3aa L74V, H514R and F811V in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170117.1 Differs from Rv0631c by 1aa E329G and from Mb0648c by 1aa P858L in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170118.1 Differs from Rv0632c and Mb0649c by 1aa M148V in Mycobacterium bovis BCG Pasteur YP_005170119.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 9 bp deletion (CGGGTGCGC-*) leads to shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (Rv0633c) (276 aa versus 279 aa) YP_005170124.1 Differs from Rv0636 by 1aa A53T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170129.1 Differs from Rv0641 by 1aa A117T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170130.1 Differs from Rv0642c by 1aa L95F in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170131.1 Differ from Rv0643c by 1aa, D98G in BCG Pasteur and BCG Mexico. YP_005170132.1 Differs from Rv0644c by 1aa L114R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170135.1 Differs from Rv0647c by 1aa T293A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170136.1 Differs from Rv0648 by 1aa L200S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170146.1 Differs from Rv0658c by 1aa P75L in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170151.1 Differs from Rv0663 by 1aa G349D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170156.1 Differs from Rv0668 by 2aa A68V, and P69R in BCG Tokyo, by 1aa P69R in BCG Pasteur and BCG Mexico YP_005170157.1 Differs from Rv0669c by 1aa P146S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170164.1 Differs from Rv0676c by 2aa I794T and V948I in Mycobacterium bovis BCG Pasteur anbd BCG Mexico, by 3aa I794T, I906V, V948I in Mycobacterium bovis BCG Tokyo. YP_005170174.1 Differs from Rv0686 by 1aa S82I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170182.1 Cytochrome YP_005170186.1 In Mycobacterium tuberculosis strain H37Rv, Rv0698 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a single base deletion (C-*) splits Rv0698 into 2 parts, Mb0717 and Mb0718 YP_005170187.1 In Mycobacterium tuberculosis strain H37Rv, Rv0698 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a single base deletion (C-*) splits Rv0698 into 2 parts, Mb0717 and Mb0718 YP_005170200.1 In Mycobacterium tuberculosis strain H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, atsA exists as a single gene. In Mycobacterium bovis, a single base transversion (G-T), introducing a stop codon, splits atsA into 2 parts, atsAa and atsA YP_005170205.1 Differs from Rv0716, Mb0737 by 1aa S134N in Mycobacterium bovis BCG Tokyo YP_005170212.1 Differs from Rv0723 by 1aa T16I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170213.1 Endopeptidase IV YP_005170217.1 Differs from Rv0728c by 1aa H242R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170218.1 Differs from Rv0729 by 2aa P134L and S439 in Mycobacterium bovis BCG Pasteur, BCG Tokyo, and BCG Mexico YP_005170235.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, two 48 bp deletions, and a 138 bp insertion leads to a longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (797 aa versus 783 aa). Differs from Mb0767 by 1aa S597N in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170236.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, insertions of 168 bp and 105 bp, a 11 bp for 71 bp substitution, and a 9 bp deletion, leads to a longer product compared to the homolog in Mycobacterium tuberculosis strain H37Rv (909 aa and 893 aa versus 801 aa). In addition, in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 48 bp deletion compared to Mycobacterium bovis and Mycobacterium tuberculosis strain H37Rv occurs YP_005170242.1 Differs from Rv0752c by 2aa A69V and V186I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170243.1 Differs from Mb0775c by 1aa V442G in Mycobacterium tuberculosis H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170245.1 Differs from Rv0755c by 1aa K545R in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170249.1 Differs from Rv0755c by 2aa I71G, L172P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170260.1 Differs from Rv0769 by 1aa V55A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170261.1 Differs from Mb0793 by 1aa V126G in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170264.1 Gamma-glutamyltranspeptidase YP_005170265.1 Differs from Rv0774c by 1aa A219S and from Mb0797c by 1aa D142A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170268.1 Differs from Rv0777 by 1aa P422T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170272.1 In Mycobacterium tuberculosis strain H37Rv, ptrB is split into 2 genes, ptrBa and ptrBb, due to a frameshift. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 2 bp insertion leads to a single product; oligopeptidase B YP_005170275.1 In Mycobacterium tuberculosis strain H37Rv, Rv0785 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a single base deletion, splits Mb0807 into 2 parts, Mb0807 and Mb0808 YP_005170276.1 In Mycobacterium tuberculosis strain H37Rv, Rv0785 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a single base deletion, splits Mb0807 into 2 parts, Mb0807 and Mb0808 YP_005170278.1 Differs from Rv0787 by 1aa H269Y in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo, and BCG Mexico YP_005170286.1 In Mycobacterium tuberculosis strain H37Rv, Rv0794c exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo, and BCG Mexico, a frameshift due to a single base deletion splits Rv0794c into 2 parts YP_005170287.1 In Mycobacterium tuberculosis strain H37Rv, Rv0794c exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo, and BCG Mexico, a frameshift due to a single base deletion splits Rv0794c into 2 parts YP_005170291.1 Differs from Rv0800 by 1aa R139L in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo, and BCG Mexico YP_005170303.1 Differs from Rv0812 by 1aa M145I in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170304.1 similar to BCG_0865c YP_005170306.1 Rhodanese-like protein YP_005170309.1 Differs from Rv0818 by 1aa P97L in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170311.1 In Mycobacterium tuberculosis strain H37Rv and Mycobacterium bovis phoT exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a single base deletion , splits phoT into two parts phoTa and phoTb. Differs from Rv0820 by 1aa L35F in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170313.1 Differs from Rv0822c by 1aa P89H in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo, and BCG Mexico YP_005170314.1 Differs from Rv0823c by 2aa C130G and L330F in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo, and BCG Mexico YP_005170317.1 Differs from Rv0826 by 1aa Q294R and Mb0849 by 1aaE97G in BCG Pasteur BCG Tokyo and BCG Mexico YP_005170320.1 Differs from Rv0829 by 1aa G80A in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170323.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, PE-PGRS13 exist as a single gene. In Mycobacterium tuberculosis and Mycobacterium bovis, it is splitted in 2 genes PE-PGRS12 and PE-PGRS13 YP_005170324.1 In Mycobacterium bovis, deletions of 143 bp and 9 bp, leads to a shorter product compared to the homolog in Mycobacterium tuberculosis strain H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo, and BCG Mexico (831 aa versus 882 aa) YP_005170325.1 Differs from Rv0835 by 1aa G162D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo, and BCG Mexico YP_005170326.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo, and BCG Mexico, a single base transition leads to a longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (240 aa versus 217 aa) YP_005170328.1 In Mycobacterium bovis, a 6bp insertion leads to a slightly longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (258 aa versus 256 aa). In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 12bp insertion (compared to its homolog in Mycobacterium tuberculosis strain H37Rv) and a 6bp insertion (compared to its homolog in Mycobacterium bovis) leads to an even longer product (260 aa) YP_005170331.1 Differs from Rv0841 by 1aa F29V in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170333.1 Differs from Rv0843 by 1aa G191D and from Mb0866 by 1aa A309D in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170334.1 Differs from Mb0867c by 1aa A73P in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170335.1 Differs from Rv0845 by 1aa E219A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo, and BCG Mexico YP_005170336.1 Differs from Mb0869c by 1aa Y411H in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo, and BCG Mexico YP_005170337.1 Differs from Rv0847 by 1aa V128A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo, and BCG Mexico YP_005170338.1 Differs from Rv0848 by 1aa S93G, and from Mb0871 by 1aa V137G in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170341.1 Differs from Rv0851c by 1aa G59S and from Mb0874c by 1aa V84F in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170349.1 Differs from Rv0859 by 1aa G150S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170350.1 Differs from Rv0860 by 1aa T701A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170351.1 Differs from Rv0861c by 1aa A258V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170352.1 Differs from Rv0862c by 2aa F224L and S749L, and from Mb0885c by 1aa F224L in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170354.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a single base deletion leads to a different NH2 part compared to its homolog in Mycobacterium tuberculosis strain H37Rv YP_005170356.1 Molybdopterin converting factor subunit 2 YP_005170357.1 In Mycobacterium bovis, a 240 bp deletion leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico(327 aa versus 407 aa). Differs from Rv0867c by 1aa E235D in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170362.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 9 bp in-frame insertion (compared to Mycobacterium tuberculosis strain H37Rv), leads to a lightly longer product (609 aa versus 606 aa). In Mycobacterium bovis, an additional 3 bp in-frame deletion (compared to Mycobacterium tuberculosis strain H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico) leads to a product of 608 aa YP_005170366.1 Differs from Mb0900c by 1aa D26G in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170368.1 In Mycobacterium bovis, Mycobaterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base deletion leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (438 aa versus 443 aa). Differs from Rv0878c and Mb0902c by 1aa K436Q in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170380.1 Differs from Rv0890c by 1aa A866P in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico; probably LuxR-family YP_005170381.1 Differs from Rv0891c by 1aa G37V in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170386.1 Differs from Rv0896 by 1aa, A421T in Mycobacterium bovis, BCG Pasteur,BCG Tokyo and BCG Mexico YP_005170397.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, a frameshift due to a single base insertion leads to a shorter product with a different NH2 part compared to its homolog in Mycobacterium tuberculosis strain H37Rv. Differs from Rv0907 by 1aa, L322P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170399.1 Differs from Rv0909 by 1aa, Q45H in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170408.1 Differs from Rv0918 by 1aa, G46S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170410.1 Differs from Rv0920c by 1aa, E249D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170414.1 In Mycobacterium tuberculosis strain H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, Rv0924c and Rv0925c exist as 2 genes. In Mycobacterium bovis, a single base deletion leads to a single product, Mb0948c. Differs from Rv0924c by 1aa, A216P in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170415.1 In Mycobacterium tuberculosis strain H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, Rv0924c and Rv0925c exist as 2 genes. In Mycobacterium bovis, a single base deletion leads to a single product, Mb0948c; Nramp; Mramp YP_005170420.1 Differs from Rv0930 by 1aa, T5M in Mycobacterium CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170421.1 In Mycobacterium tuberculosis strain H37Rv, pknD exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a single base insertion splits pknD into 2 parts,pknDa and pknDb YP_005170422.1 In Mycobacterium tuberculosis strain H37Rv, pknD exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a single base insertion splits pknD into 2 parts,pknDa and pknDb YP_005170423.1 Differs from Rv0932c by 1aa, A115S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170424.1 In Mycobacterium tuberculosis strain H37Rv, pstB exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, a frameshift due to a single base insertion splits pstB into 2 parts, pstBa and pstBb YP_005170425.1 In Mycobacterium tuberculosis strain H37Rv, pstB exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, a frameshift due to a single base insertion splits pstB into 2 parts, pstBa and pstBb YP_005170426.1 Differs from Rv0934 by 1aa, A352V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170431.1 cyclase/dehydrase YP_005170437.1 Differs from Rv0945 by 1aa, G180R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170443.1 Differs from Rv0951 by 1aa, A261V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170444.1 Differs from Rv0952 by 1aa, K209R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170445.1 Differs from Rv0953c and Mb0978c by 1aa, A50T in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170449.1 IMP cyclohydrolase YP_005170450.1 Differs from Rv0958 by 1aa, P274S in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170455.1 Differs from Rv0962c by 1aa, L186P in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170456.1 Differs from Rv0963c and Mb0988c by 1aa, S258G in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170457.1 Differs from Rv0964c by 1aa, T124P in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170458.1 Differs from Rv0965c by 1aa, H94R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170459.1 Differs from Rv0966c by 2aa, A175V, G186W in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170462.1 Differs from Rv0969 by 1aa, N484D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170465.1 Differs from Rv0972c by 1aa, H236Q in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170466.1 Differs from Rv0973c by 1aa, F220I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170467.1 Differs from Rv0974c by 1aa, K51N in Mycobacteium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170468.1 In Mycobacterium bovis, a frameshift due to a single base deletion leads to a shorter product with a different COOH part compared to its homolog in Mycobacterium tuberculosis strain H37Rv, Mycobacterium bovis BCG pasteur, BCG Tokyo and BCG Mexico YP_005170471.1 In Mycobacterium bovis, Mycobacterim bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 115 bp to 127 bp substitution leads to as lightly longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (335 aa versus 331aa) YP_005170474.1 Differs from Rv0980c by 1aa, Q43H, and from Mb1006c by 1aa, A270T in Mycobacteium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170475.1 Differs from Rv0981 by 1aa, S70G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170476.1 Differs from Rv0982 by 1aa, H339L in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170477.1 Differs from Rv0983 by 1aa, P390L in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico YP_005170479.1 Differs from Rv0985c and Mb1011c by 1aa, L145R in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170480.1 Differs from Rv0986 by 1aa, L228V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico YP_005170481.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium tuberculosis strain H37Rv, Rv0987 exists as a single gene. In Mycobacterium bovis, a single base transition introduces a stop codon that splits Rv0987 in two parts, Mb1013 and Mb1014. Differs from Rv0987 by 1aa, V717F in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170482.1 Differs from Rv0988 by 2aa, I57V, D135Y in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170483.1 Differs from Rv0989c by 1aa, V321I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170484.1 Differs from Rv0990c by 1aa, A54S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170486.1 Differs from Rv0992c by 2aa, I3M, S135G, and from Mb1019c by 1aa, S135G in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170487.1 Differs from Rv0993 by 1aa, R235Q in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170488.1 Differs from Rv0994 by 1aa, G230C in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170490.1 Differs from Rv0996 by 1aa, D92G, and from Mb1023 by 1aa, D92G in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170498.1 Differs from Rv1002c by 1aa, L115V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico. YP_005170501.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, as in Mycobacterium bovis, a single base transition leads to a longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (478 aa versus 458 aa) YP_005170502.1 Differs from Rv1006 by 1aa, S535P, and from Mb1033 by 1aa, N25S in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170503.1 Differs from Rv1007c by 1aa, G39R in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170504.1 Differs from Rv1008 by 1aa, N186T in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico; YjjV protein YP_005170505.1 Differs from Rv1009 by 2aa, E282G, V357A in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170508.1 In Mycobacterium tuberculosis strain H37Rv, Rv1012 exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, a frameshift due to a single base insertion leads to a different NH2 terminus. Differs from Rv1012 by 1aa, N65S YP_005170512.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, a frameshift due to a 5 bp deletion leads to a longer product with a different COOH part compared to its homolog in Mycobacterium tuberculosis strain H37Rv YP_005170513.1 Differs from Rv1017c by 1aa, H204R in Mycobacterium bovis BCG Mexico YP_005170514.1 Differs from Mb1046c by 2aa, E160G, E246Q in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170518.1 Differs from Rv1022 by 1aa, P33T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170524.1 Differs from Rv1028c by 3aa, S83P, D295G, S368P, and from Mb1056c by 1aa, S83P in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170534.1 Differs from Rv1037c by 1aa, L20Q in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170536.1 Differs from Rv1039c and Mb1068c by 1aa, K175N in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170538.1 Differs from Rv1042c by 1aa, E129G in Mycobacterium bovis and BCG Pasteur. Differs from Mb1070c by G129E in Mycobacterium tuberculosis and Mycobacterium bovis BCG Tokyo and BCG Mexico YP_005170539.1 Differs from Rv1043c by 1aa, T99A, and from Mb1072c by 1aa, G263C in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170541.1 Differs from Mb1074 by 1aa, W104G in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico. YP_005170542.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a 1bp insertion, compared to Mycobacterium tuberculosis strains H37Rv, leads to different C-terminus YP_005170544.1 Differs from Rv1048c and Mb1077c by 2aa, A37D, T173A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170563.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo, and BCG Mexico, 2 deletions each of 3 bp and a 18 bp insertion leads to a longer product compared to their homolog in Mycobacterium tuberculosis strain H37Rv (671 aa versus 667 aa) YP_005170564.1 In Mycobacterium bovis, insertions of 717 bp and 192 bp, and a 9 bp deletion, leads to a longer product compared to the homolog in Mycobacterium tuberculosis strain H37Rv (763 aa versus 463 aa). In Mycobacterium bovis BCG Pasteur a deletion of 99 bp leads to a smaller product compared to the homolog in Mycobacterium bovis (730 aa versus 763 aa) YP_005170565.1 Differs from Rv1069c and from Mb1098c by 1aa L481P in BCG Pasteur, BCG Tokyo and BCG Mexico. YP_005170574.1 Differs from Rv1078 by 1aa T171I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170583.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, insertions of 144 bp and 3 bp, and deletion of 42 bp, lead to a longer product compared to the homolog in Mycobacterium bovis (809 aa versus 774 aa). In Mycobacterium bovis, insertions of 3 bp and 45 bp, and deletions of 18 bp and 9 bp, lead to a longer product compared to the homolog in Mycobacterium tuberculosis strain H37Rv (774 aa versus 767 aa) YP_005170586.1 Differs from Rv1089 and Mb1118 by 1 aa N84T in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170589.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 9 bp deletion leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (850 aa versus 853 aa) YP_005170591.1 Differs from Rv1093 by 1aa, A36V in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170594.1 Differs from Rv1096 by 1aa, S272P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170595.1 Differs from Rv1097c by 1aa, L23P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170598.1 Differs from Rv1100 and Mb1130 by 1aa, P21T in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170599.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, a frameshift due to a single base deletion leads to a shorter product with a different amino part compared to its homolog in Mycobacterium tuberculosis strain H37Rv. Differs from Mb1131c by 1 aa, E315D in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170600.1 Differs from Rv1102c by 1aa, I65T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170607.1 Differs from Rv1109c and Mb1139c by 1aa, T147A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170610.1 Differs from Rv1112 by 1aa, I77V in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170613.1 Differs from Rv1115 by 1aa, P19S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170619.1 Differs from Mb1151c by 1aa, G53A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170624.1 Differs from Rv1125 by 1aa, G101S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170626.1 Differs from Rv1127c by 2aa, E69G, P350T YP_005170627.1 Differs from Rv1128c by 1aa, G270E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170629.1 Differs from Rv1130 by 2aa, G3D, L10F in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170631.1 Differs from Mb1163 by 1aa, T176M in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170645.1 In Mycobacterium tuberculosis strain H37Rv, Rv1145 and Rv1146 exist as 2 genes. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG MExico, and Mycobacterium bovis, a single base insertion at H37Rv position 1273250-1273251 leads to a single product YP_005170647.1 Differs from Rv1148c and Mb1179c by 1aa, N354H in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170651.1 Differs from Rv1153c by 2aa, T36A, G53D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico. YP_005170652.1 Differs from Rv1154c by 1aa, A123T in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170653.1 Differs from Rv1155 by 1aa, P115S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170655.1 Is 24 codons shorter than Rv1157c and Mb1188c due to 72bp deletion, after codon 214 YP_005170660.1 Differs from Rv1161 by 2aa, L458V, G821D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170662.1 Differs from Rv1163 and Mb1195 by 1aa, L106P in Mycobacterium bovis BCG Pasteur YP_005170663.1 Differs from Rv1164 by 1aa, V200A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170664.1 Differs from Rv1165, Mb1197 by 1aa L98V in Mycobacterium bovis BCG Tokyo. YP_005170667.1 In Mycobacterium tuberculosis strain H37Rv, PPE17 exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, a frameshift due to a single base insertion splits PPE17 into 2 parts, PPE17a and PPE17b YP_005170671.1 Differs from Rv1172c by 1aa, H133Q in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170674.1 Differs from Rv1175c by 3aa, N90T, S210T, S649I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170679.1 In Mycobacterium tuberculosis strain H37Rv, Rv1180 and Rv1181 exist as 2 genes. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, a single base transversion leads to a single product (similar to other organisms). Differs from Rv1181 by 2aa, A1068D, P1423A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170684.1 Differs from Rv1186c by 1aa, A207P in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170687.1 In Mycobacterium tuberculosis strain H37Rv and Mycobacterium bovis AF2122/97, sigI (290 aa) and Rv1189/Mb1221 (304 aa) exist as two genes. In Mycobacterium bovis BCG Pasteur and BCG Mexico they have been fused in-frame following a 1548bp deletion (N-RD18) compared to H37Rv YP_005170692.1 In Mycobacterium bovis, a 14 bp to 11 bp substitution leads to a slightly shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (390 aa versus 391 aa). Differs extensively from orthologs Mb1228 and Rv1196 due to numerous substitutions and transitions. Region from aa 210 - 260 shows most difference YP_005170693.1 Differs from Mb1229 by 1aa, A58T in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170694.1 Differs from Rv1198 by 1aa, D12A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170695.1 Differs from Rv1199c and Mb1231c by 1aa, G90D in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170708.1 Differs from Rv1212c by 2aa, I105V, W340L and from Mb1244c by 1aa, W340L in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170710.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, and Mycobacterium tuberculosis strain H37Rv, PE14 exists as a single gene. In Mycobacterium bovis, a frameshift due to a 5 bp deletion leads to a diffferent COOH terminus YP_005170711.1 Differs from Rv1215c by 1aa, S169A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170713.1 Differs from Mb1249c by 1aa, A143T in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170714.1 Differs from Rv1218c by 1aa, R243Q in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170715.1 Differs from Rv1219c and Mb1251c by 1aa, C113W in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170719.1 Differs from Rv1223 by 2aa, L288F, N445S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170720.1 Differs from Rv1224 by 1aa, G8W in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170722.1 Differs from Rv1226c by 1aa, A450V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170726.1 Differs from Rv1230c by 2aa, G45S, P97S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170728.1 Differs from Rv1232c by 1aa, G149C in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170740.1 Differs from Rv1244 by 1aa, K242Q in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170744.1 Differs from Rv1248c by 1aa, M747V in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170745.1 Differs from Rv1249c by 1aa, T95A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170746.1 Differs from Rv1250 by 1aa, G278R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170749.1 Differs from Rv1253 by 1aa, V143M in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170751.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 3007 bp deletion (RD13) leads to the fusion of Rv1257c and Rv1255c, and the deletion of Rv1256c, compared to Mycobacterium tuberculosis strain H37Rv YP_005170754.1 In Mycobacterium tuberculosis strain H37Rv, Rv1260 exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, a frameshift due to a single base deletion splits Rv1260 into 2 parts YP_005170755.1 In Mycobacterium tuberculosis strain H37Rv, Rv1260 exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, a frameshift due to a single base deletion splits Rv1260 into 2 parts YP_005170757.1 Differs from Rv1262c by 1aa, R104P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170759.1 Differs from Rv1264 by 1aa, C204R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170761.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, the pknH gene contains several substitutions, transitions and transversions compared to Mycobacterium tuberculosis strain H37Rv. The most significant difference results from a 127 bp to 24 bp substitution that leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (596 aa versus 626 aa). Differs from Mb1297c by 2aa, F374L, I396N in BCG Pasteur and BCG Tokyo YP_005170765.1 Differs from Mb1301c by 1aa, A134T in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170769.1 Differs from Rv1274 by 1aa, P168L in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170771.1 Differs from Rv1276c by 1aa, S92T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170781.1 Differs from Mb1317 by 1aa, V245L in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170783.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, a 153 bp deletion leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (405 aa versus 456 aa) YP_005170796.1 Differs from Mb1332 by 1aa, G121A, and from Rv1300by 2aa, G121A, C194R in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170797.1 Differs from Rv1301 by 1aa, Q196P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico. YP_005170798.1 Differs from Rv1302 by 1aa, G357V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico. YP_005170808.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, a 2 bp deletion at the 3' end leads to a slightly shorter product compared to Mycobacterium tuberculosis strain H37Rv (144 aa versus 147 aa). Also differs from Rv1312 by 1aa, V3A in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170809.1 In Mycobacterium tuberculosis strain H37Rv, Rv1313c exists as a single gene. In Mycobacterium bovis and Mycobacterium bovis BCG Pasteur and BCG Mexico, a frameshift due to a 12 bp to 1bp substitution splits Rv1313c into 2 parts. Equivalent to Rv1313c (IS1557) in BCG Tokyo. YP_005170810.1 In Mycobacterium tuberculosis strain H37Rv, Rv1313c exists as a single gene. In Mycobacterium bovis and Mycobacterium bovis BCG Pasteur and BCG Mexico, a frameshift due to a 12 bp to 1 bp substitution splits Rv1313c into 2 parts YP_005170814.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium tuberculosis strain H37Rv, alkA exists as a single gene. In Mycobacterium bovis, a single base transition introduces a premature stop codon that splits alkA into 2 parts, alkAa and alkAb YP_005170817.1 Differs from Rv1320c by 1aa, A531T in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170818.1 Differs from Rv1321 by 1aa, R144S in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170823.1 Differs from Rv1325c by 1aa, A320T in Mycobacterium bovis BCG Pasteur and Mexico. In BCG Tokyo differs, there are deleted in Mycobacterium bovis BCG Tokyo. YP_005170824.1 Differs from Rv1326c by 3aa, G40D, S468P, P470S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170826.1 Differs from Rv1328 by 3aa, G532D, F576V, S801A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170828.1 Differs from Rv1330c by 1aa, A429D and from Mb1365c by 1aa, E358K in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170836.1 Differs from Rv1338 and Mb1373 by 1aa, L154R in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170838.1 Differs from Mb1375 by 1aa, G97S in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasrteur, BCG Tokyo and BCG Mexico YP_005170841.1 Differs from Rv1343c by 1aa, A81E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170853.1 Differs from Rv1355c by 1aa (P81L) in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170855.1 Differs from Rv1357c and Mb1392c by 1aa, S276T in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170856.1 Differs from Rv1358 by 1aa A442D, and from Mb1393 by 1aa, G31V in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170857.1 Differs from Mb1394 by 1aa, G187R in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170859.1 Differs from Rv1361c by 3aa, Q30K, V55T, P325Q in BCG Pasteur, BCG Tokyo and BCG Mexico, and more extensively from Mb1396c due to several substitutions, transitions and transversions between codons 158-260 YP_005170860.1 Differs from Rv1362c by 1aa, G103V Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170861.1 Differs from Mb1398c by 1aa, T155N in Mycobacterium tuberculosis H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170862.1 Differs from Rv1364c by 2aa, T236A, E465A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170863.1 Differs from Rv1365c by 1aa, K82E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170865.1 Differs from Rv1367c by 1aa, V169I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170867.1 In Mycobacterium tuberculosis strain H37Rv, Rv1371 exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, a frameshift due to a single base insertion splits Rv1371 into 2 parts, with the latter being the more likely product YP_005170868.1 In Mycobacterium tuberculosis strain H37Rv, Rv1371 exists as a single gene. In Mycobacterium bovis, a frameshift due to a single base insertion splits Rv1371 into 2 parts, with the latter being the more likely product. Differs from both Mb1405 and Rv1371 by 1aa, V210I in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170869.1 Differs from Rv1372 and Mb1406 by 2aa, N75K, A101T in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170870.1 In Mycobacterium tuberculosis strain H37Rv, Rv1373 exists as a single gene as is the case in Mycobacterium bovis BCG Pasteur and BCG Mexico. In Mycobacterium bovis, a frameshift due to a single base insertion splits Rv1373 into 2 parts, Mb1407 and Mb1408. Differs from Rv1373 by 2aa, additional P, P155, and L232P. In Mycobacterium bovis BCG Tokyo, a frameshift due to two base insertions splits Rv1373 into 2 parts (182 aa, 155 aa). YP_005170871.1 Differs from Rv1374c by 1aa, A136T in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170872.1 Differs from Rv1375 by 1aa, R86G, and from Mb1410by 1aa, R322P in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170873.1 Differs from Rv1376 by 1aa, P236R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170875.1 Differs from Rv1378c by 1aa, W37R, and from Mb1413c by 1aa, R9H in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170878.1 Differs from Rv1381 by 1aa, F189V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170880.1 Differs from Rv1383 by 1aa, G118A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170881.1 Differs from Rv1384 by 1aa, E821A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170884.1 Differs from Rv1387 by 1aa, A94V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170889.1 Differs from Rv1392 by 1aa, Q195R, and from Mb1427 by 2aa, T60A Q195R in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170891.1 Differs from Rv1394c by 1aa, L135R in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170893.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, a 372 bp deletion leads to a shorter product with a different COOH part compared to its homolog in Mycobacterium tuberculosis strain H37Rv (452 aa versus 576 aa). Differs from Rv1396c by 2 aa, S66R, H300R in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170894.1 Differs from Rv1397c by 1aa, G103D in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170896.1 Differs from Rv1399c and Mb1434c by 1aa, A46P in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170904.1 Differs from Rv1407 by 1aa, L427I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170906.1 Differs from Rv1409 by 2aa, N30K, T71A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico; diaminohydroxyphosphoribosylaminopyrimidine deaminase, 5-amino-6-(5-phosphoribosylamino) uracil reductase YP_005170912.1 GTP cyclohydrolase II protein YP_005170919.1 Differs from Mb1457 by 1aa, A86V in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170922.1 Differs from Rv1425 by 1aa, L343P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170930.1 Differs from Rv1433 and Mb1468 at C-terminal end due to 1bp deletion in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170932.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, an in-frame insertion of 21 bp leads to a longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (209 aa versus 202 aa). Differs from Rv1435c by 1aa, T67A in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170935.1 Differs from Rv1438 and Mb1473 by 1aa, T169I in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170938.1 Differs from Rv1441c by 1aa G236D and from Mb1476c by 1aa T354N in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170943.1 Differs from Rv1446v by 1aa P192R in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico. YP_005170945.1 Differs from Rv1448c by 1aa A244T in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170946.1 Differs from Rv1449c by 1aa D18Y in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170947.1 In Mycobacterium bovis, insertions of 27 bp, 207 bpand 27 bp, substitutions of 60 bp to 63 bp and 11 bp, and a 27 bp deletion, leads to a longer product compared to the homolog in Mycobacterium tuberculosis strain H37Rv (1408 aa versus 1329 aa). In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, one 27bp-insertion is missing, leading to a product of 1399 aa YP_005170948.1 Differs from Rv1451 by 1aa T68A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170949.1 In Mycobacterium bovis BCG Pasteur, Tokyo and BCG Mexico, a insertion of 51 bp, several substitutions and a deletion of 207 bp, lead to a smaller product compared to its homolog Mycobacterium bovis (740 aa versus 795 aa). Differs from BCG_1513c by 5aa, G647D, G648I, D649I, G650V, T651A in BCG Tokyo. YP_005170950.1 Differs from Rv1453 by 1aa Q405P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170956.1 Differs from Rv1459c by 1aa, E113K in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170957.1 Differs from Rv1460 by 2aa, F198I, V265 and from Mb1495 by 1aa, F198I in BCG Paasteur, BCG Tokyo and BCG Mexico YP_005170959.1 Differs from Rv1462 by 1aa, D183N in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170969.1 Differs from Rv1472 by 1aa, S78P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170971.1 Differs from Rv1473A by 1aa, P60S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170979.1 Differs from Rv1481 and Mb1517 by 1aa, D254N in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170984.1 First 270 aa similar to Mb1522c and Rv1486c (but differs by 1aa, N198K), then frameshifts due to extra base. 2GC in BCG Tokyo, 1GC in BCG Pasteur and BCG Mexico YP_005170997.1 Differs from Rv1498c by 1aa, H191R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005170998.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base transition at the 5' start leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (63 aa versus 70 aa) YP_005171000.1 Differs from Rv1500 and Mb1538 by 1aa, E45D in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171002.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium tuberculosis strain H37Rv, Rv1502 exists as a single gene. In Mycobacterium bovis, a frameshift due to a single base deletion, splits Rv1502 into 2 parts, Mb1540 and Mb1541. Differs from Rv1502 by 1aa, C213Y in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171003.1 In Mycobacterium tuberculosis strain H37Rv, Rv1503c and Rv1504c exist as 2 genes. In Mycobacterium bovis BCG Pasteur, BCG Tokyo,BCG Mexico, and Mycobacterium bovis, a single base transversion leads to a single product. Differs from Rv1503c by 1aa, K316E in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171004.1 In Mycobacterium tuberculosis strain H37Rv, Rv1503c and Rv1504c exist as 2 genes. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, a single base transversion leads to a single product. Differs from Rv1503c by 1aa, K316E in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171005.1 Differs from Rv1517 by 1aa, F188L in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171006.1 Differs from Rv1518 by 2aa, R266S, L317M in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171009.1 Differs from Rv1521 by 1aa, I74S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171010.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, a single base transversion creating a stop codon, leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (1107 aa versus 1146 aa). Differs from Rv1522c (1146 aa) by 1aa, P381S, and from Mb1549c, (1107 aa) by 2aa, T204A, S947N in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171015.1 Differs from Rv1527c by 2aa, T532P, L1439F in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171017.1 Differs from Rv1529 and Mb1556 by 1aa, G289D in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171018.1 Differs from Rv1530 and Mb1557 by 1aa, L330P in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171024.1 Differs from Rv1536 by 1aa, A926P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171032.1 In Mycobacterium tuberculosis strain H37Rv, and Mycobacterium bovis, Rv1544 and Mb1571 exist as a single gene. In Mycobacterium bovis BCG Pasteur and BCG Mexico, two genes exist as a result of a 10 bp deletion that has occurred. In BCG Tokyo exists same as Rv1544 and Mb157 YP_005171033.1 In Mycobacterium tuberculosis strain H37Rv, and Mycobacterium bovis, Rv1544 and Mb1571 exist as a single gene. In Mycobacterium bovis BCG Pasteur and BCG Mexico, two genes exist as a result of a 10 bp deletion that has occurred. In BCG Tokyo exists same as Rv1544 and Mb1571. YP_005171037.1 Differs from Rv1548c by 1aa, G258D, and from Mb1575c by 1aa, V68A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171038.1 In Mycobacterium tuberculosis strain H37Rv, Rv1549 and Rv1550 exist as 2 genes. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, two single base insertions lead to a single product. Differs from Rv1550 by 1aa, S362L in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171041.1 In Mycobacterium tuberculosis strain H37Rv, Rv1553 and Rv1554 exist as 2 genes. In Mycobacterium bovis (Mb1579), a 4bp insertion leads to a single product and in Mycobacterium bovis BCG Pasteur and BCG Mexicoa 10 bp insertion leads to insertion of two additional Gly codons. In Mycobacterium bovis BCG Tokyo, a 9 bp insertion leads to insertion of three additional Gly codons. 16Gs in BCG Tokyo, 17Gs in BCG Pasteur and BCG Mexico. YP_005171044.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, a 2153 bp insertion leads to a new protein with no Equivalent in Mycobacterium tuberculosis strain H37Rv. Belongs to the TbD1 region YP_005171045.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, a 2153 bp insertion leads to a longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv. Belongs to the TbD1 region YP_005171051.1 In Mycobacterium tuberculosis strain H37Rv, and Mycobacterium bovis, treZa and treZb exist as a single gene, treZ. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, a single base deletion leads to frameshift and two genes, treZa and treZb YP_005171052.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and in Mycobacterium tuberculosis strain H37Rv, treY exists as a single gene. In Mycobacterium bovis, a large deletion of 806 bp, RD17, splits Rv1563c into two parts, treYa and treYb YP_005171059.1 Differs from Rv1570 by 2aa, V134A, T191M, and from Mb1597 by 1aa, V134A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171061.1 In Mycobacterium tuberculosis strain H37Rv and Mycobacterium bovis, Rv1587c possibly exists as a pseudogene that has been disrupted when the phage entered. In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, the prophage is absent and the C-terminal part of protein differs accordingly YP_005171066.1 Differs from Rv1592c by 1aa, V322I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171070.1 Differs from Rv1596 by 1aa, D64N in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171071.1 Differs from Rv1597 by 2aa, D21G, M93L, and from Mb1623 by 1aa, M93L in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171076.1 Differs from Rv1602 by 1aa, N201S in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171078.1 Differs from Rv1604 by 3aa, H93Y, Q124P, L251P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171079.1 Differs from Rv1605 by 1aa, L121P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171091.1 Differs from Mb1643 by 1aa, E220D in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171092.1 Differs from Rv1618 by 1aa, L121H in Mycobacterium tuberculosis CDC1331, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171094.1 Component linked with the assembly of cytochrome' transport transmembrane ATP-binding protein YP_005171095.1 Component linked with the assembly of cytochrome' transport transmembrane ATP-binding protein YP_005171098.1 Differs from Rv1624c by 1aa, A178T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171102.1 Differs from Rv1628c and Mb1654c by 1aa, V93A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171104.1 Differs from Rv1630 by 1aa, T440A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171107.1 Differs from Rv1633 and Mb1659 by 1aa, S405T in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171108.1 Differs from Rv1634 by 2aa, Q13E, R198G, and from Mb1660 by 1aa, Q13E in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171115.1 Differs from Rv1640c by 2aa, E769D, G944D, and from Mb1667c by 1aa, E769D in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171116.1 Differs from Rv1641 and Mb1668 by 1aa, S34A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171119.1 Differs from Rv1644 by 1aa, P232L in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171122.1 Differs from Rv1647 by 1aa, P2A in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171124.1 Differs from Rv1649 by 1aa, D276A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171125.1 Differs from Rv1650 by 1aa, V212A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171126.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, an in-frame insertion of 21 bp leads to a longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (1018 aa versus 1011 aa). Differs from Rv1651c by insertion of 7aa at position 152 and by 1aa, V179A in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171136.1 Differs from Rv1661 by 2aa, W670R, P1176S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171137.1 Differs from Rv1662 by 6aa, Y78D, deletion of V692, V807A, G1260R, T1356A, C1468Y, and from Mb1690 by 1aa, deletion of V692 in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171139.1 Differs from Rv1664 by 2aa, T36A, P350A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171142.1 In Mycobacterium tuberculosis strain H37Rv, Rv1668c and Rv1667c exist as 2 genes with a small overlap between them. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 10 bp insertion leads to a single product YP_005171149.1 Differs from Rv1675c by 1aa, A59V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171154.1 Differs from Mb1707 by 1aa, A230G in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171160.1 Differs from Rv1686c by 1aa, F20V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171164.1 In Mycobacterium bovis, a 2 bp insertion at the 5' end, leads to a longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv and in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico (139 aa versus 127 aa) YP_005171174.1 Differs from Mb1726 by 2aa, F43L, A202T in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171177.1 Differs from Rv1703c and Mb1729c by 1aa, S48G in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171178.1 Differs from Rv1704c by 2aa, L93R, S122G, and from Mb1730c by 1aa, S122G in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171179.1 Differs from Rv1705c by 2aa, A2D, V313L, and from Mb1731c by 1aa, A2D in BCG Pasteur. Differs from Rv1705c by 1aa, V313L in BCG Tokyo and BCG Mexico YP_005171182.1 Differs from Rv1707 by 1aa, Q438R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171183.1 Differs from Rv1708 by 1a, a T56A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171190.1 In Mycobacterium tuberculosis strain H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, Rv1715/fadB3 exists as a single gene. In Mycobacterium bovis, a single base transition splits fadB3 into 2 parts, fadB3a and fadB3b YP_005171191.1 Differs from Rv1716 by 2aa, G178S, A276V in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171193.1 In Mycobacterium tuberculosis strain H37Rv, exists as a single gene. In Mycobacterium bovis AF2122/97, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base deletion leads to a shorter product with a different COOH terminus YP_005171197.1 Differs from Rv1722 by 1aa, M31V Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171201.1 Differs from Rv1726 by 1aa, Y326H, and from Mb1755 by 1aa, A61P in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico. YP_005171202.1 Differs from Rv1727 and Mb1756 by 1aa, D22E in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171208.1 Differs from Rv1733c by 1aa, H68Q in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171209.1 Differs from Mb1763c by 1aa, T79A in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171211.1 Differs from Rv1736c by 2aa, H53D, G77D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171214.1 Differs from Rv1739c by 1aa, L134R in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171216.1 Differs from Rv1741 by 1aa, T67K in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171217.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, a single base insertion leads to shorter product with a different NH2 part compared to its homolog in Mycobacterium tuberculosis strain H37Rv YP_005171218.1 Differs from Mb1772 by 1aa, V56D in Mycobacterium tuberculosis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171219.1 Differs from Rv1744c by 1aa, Q121R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171220.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, truncation at the 3' end due to a single base tranversion, leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (176 aa versus 203 aa). Differs from Mb1774c by 1aa, F48S in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171221.1 Differs from Rv1746 by 1aa, T325A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171226.1 Differs from Rv1751 by 2aa, T311M, L439V, and from Mb1780 by 1aa, T311M in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171228.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, PPE24 differs in the 26 aa tandem repeat region, two copies less (in-frame deletion of 156 bp), and in the 25 aa repeat region, 2 and one more copies (in-frame insertion of 150bp and 75bp), respectively, compared to their homolog in Mycobacterium tuberculosis strain H37Rv YP_005171229.1 Differs from Rv1754c and Mb1783c by 1aa, S546N in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171230.1 Truncated by RvD2 deletion (6804bp) in Mycobacterium tuberculosis strain H37Rv YP_005171231.1 No Equivalent in Mycobacterium tuberculosis strain H37Rv. Belongs to the RvD2 region YP_005171232.1 No Equivalent in Mycobacterium tuberculosis strain H37Rv. Belongs to RvD2 region YP_005171233.1 No Equivalent in Mycobacterium tuberculosis strain H37Rv. Belongs to RvD2 region YP_005171234.1 Belongs to the RvD2 region. In Mycobacterium tuberculosis strain H37Rv, Rv1758 is interrupted by IS6110 insertion element and the 5'-end is deleted YP_005171235.1 In Mycobacterium tuberculosis strain H37Rv, Rv1759c exists as a single gene. In Mycobacterium bovis BCG Pasteur, Tokyo and BCG Mexico, and Mycobacterium bovis, a single base deletion splits wag22 into 2 parts, wag22a and wag22b. Differs from Mb1789c and Rv1759c by three deletions R129 replaced by AG, 5aa deletion at position 739 and 12aa deletion at position 777 making protein smaller (802 aa versus 820 aa) in BCG Pasteur and BCG Mexico. 5aa deletion at position 739 and 12aa deletion at position 777 making protein smaller (803 aa versus 820 aa) in BCG Tokyo. YP_005171236.1 In Mycobacterium tuberculosis strain H37Rv, Rv1759c exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, a single base deletion splits wag22 into 2 parts, wag22a and wag22b. Differs from Mb1789c and Rv1759c by three deletions R129 replaced by AG, 5aa deletion at position 739 and 12aa deletion at position 777 making protein smaller (802 aa versus 820 aa) in BCG Pasteur and BCG Mexico. 5aa deletion at position 739 and 12aa deletion at position 777 making protein smaller (803 aa versus 820 aa) in BCG Tokyo. YP_005171237.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a frameshift due to a single base deletion leads to a longer product with a different COOH part compared to its homolog in Mycobacterium tuberculosis strain H37Rv. Also differs from Rv1760 by 1aa, V219E YP_005171240.1 In Mycobacterium tuberculosis strain H37Rv this region is occupied by IS6110 which interrupts the gene and appears to have deleted sequences downstream. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico, and Mycobacterium bovis, there is an 848bp sequence that has replaced a 121bp sequence YP_005171241.1 In Mycobacterium tuberculosis strain H37Rv this region is occupied by IS6110 which appears to have deleted sequences downstream. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, there is an 848bp sequence that has replaced a 121bp sequence YP_005171242.1 In Mycobacterium bovis BCG Pasteur, deletion of 9068 bp (region of difference RD14), compared to Mycobacterium tuberculosis H37Rv, Mycobacterium bovis AF2122/97, BCG Tokyo and BCG Mexico, removes genes Rv1765A-Rv1772 and merges truncated genes Rv1773c and Rv1765c in BCG Pasteur. Mycobacterium bovis (Mb1794c) and BCG Tokyo have a longer products to its homolog in Mycobacterium tuberculosis H37Rv (Rv1765c, 418 aa versus 365 aa). YP_005171243.1 Equivalent to Mycobacterium bovis (Mb1975c) and Mycobavterium tuberculosis H37Rv (Rv1765A) in Mycobacterium bovis BCG Tokyo and BCG Mexico YP_005171244.1 Equivalent to Mycobacterium bovis (Mb1975A) and Mycobavterium tuberculosis H37Rv (Rv1766) in Mycobacterium bovis BCG Tokyo and BCG Mexico YP_005171245.1 Equivalent to Mycobacterium bovis (Mb1796) and Mycobavterium tuberculosis H37Rv (Rv1767) in Mycobacterium bovis BCG Tokyo and BCG Mexico YP_005171246.1 In Mycobacterium bovis, Mycobacterium BCG Tokyo and BCG Mexico, a 18bp insertion, leads to a longer product compared to its homolog in Mycobacterium tuberculosis H37Rv (624 aa versus 618 aa). YP_005171247.1 Equivalent to Mycobacterium bovis (Mb1798) and Mycobavterium tuberculosis H37Rv (Rv1769) in Mycobacterium bovis BCG Tokyo and BCG Mexico YP_005171248.1 Equivalent to Mycobacterium bovis (Mb1799) and Mycobavterium tuberculosis H37Rv (Rv1770) in Mycobacterium bovis BCG Tokyo and BCG Mexico YP_005171249.1 Equivalent to Mycobacterium bovis (Mb1800) and Mycobavterium tuberculosis H37Rv (Rv1771) in Mycobacterium bovis BCG Tokyo and BCG Mexico YP_005171250.1 Equivalent to Mycobacterium bovis (Mb1801) and Mycobacterium tuberculosis H37Rv (Rv1772) in Mycobacterium bovis BCG Tokyo and BCG Mexico YP_005171251.1 Equivalent to Mycobacterium bovis (Mb1802c) and Mycobacterium tuberculosis H37Rv (Rv1773c) in Mycobacterium bovis BCG Tokyo and BCG Mexico YP_005171255.1 Differs from Rv1777 by 1aa Q325H in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171256.1 Differs from Mb1807c by 1aa T32R in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171259.1 Differs from Rv1781c and Mb1810c by 1aa, T12A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171260.1 Differs from Rv1782 by 1aa H41R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171261.1 In Mycobacterium tuberculosis strain H37Rv, Rv1783 and Rv1784 exist as 2 genes. In Mycobacterium bovis and in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base transversion leads to a single product. Differs from Rv1783 and Mb1812 by 1aa, V692A in BCG Pasteur, similar to Rv1784 in BCG Pasteur, Tokyo and BCG Mexico YP_005171264.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur,BCG Tokyo and BCG Mexico, a 8 bp to 5 bp substitution, leads to a slightly shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (364 aa versus 365 aa). similar to Mb1815 YP_005171266.1 Differs from Mb1817 by 1aa, S274A, similar to Rv1789 in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171267.1 similar to Rv1790 differs from Mb1818 by 1aa, P190S in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171269.1 Differs from Rv1792 by 1aa Q48M in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171272.1 Differs from Mb1823 and Rv1795 by 1aa, T256A and D261G, respectively, in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171277.1 Differs from Rv1800 by 3aa, W144C, V253F, V432I, and from Mb1828 by 1aa, V432I in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171280.1 In Mycobacterium tuberculosis strain H37Rv, PE_PGRS32 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo, a frameshift due to a single base transition splits PE_PGRS32 into 2 parts, PE_PGRS32a and PE_PGRS32b YP_005171281.1 In Mycobacterium tuberculosis strain H37Rv, PE_PGRS32 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a single base transition splits PE_PGRS32 into 2 parts, PE_PGRS32a and PE_PGRS32b YP_005171285.1 Differs from Rv1807 by 2aa, S223F, L234V. similar to Mb1836 in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171286.1 Differs from Rv1808 by 1aa, A301G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171287.1 In Mycobacterium tuberculosis strain H37Rv, PPE33 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur,BCG Tokyo and BCG Mexico, a frameshift due to a single base transition splits PPE33 into 2 parts, PPE33a and PPE33b YP_005171290.1 Differs from Rv1812c by 1aa, P30L in Mycobacteium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171293.1 Differs from Rv1815 by 1aa, F83I in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171297.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 9 bp insertion, leads to a longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (501 aa versus 498 aa). Differs from Rv1818c by 4aa, S233G, and deletion of 3aa near C-terminus. similar to Mb1849c YP_005171298.1 Differs from Rv1819c by 1aa, V603I in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171305.1 Differs from Rv1826 by 1aa, A80E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171308.1 Differs from Mb1860 by 1aa R93C in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171311.1 Differs from Rv1832 by 2aa, A215V, A448T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171313.1 Differs from Mb1865 by 1aa, V272A in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171315.1 Differs from Rv1836c by 2aa, C137R, H591R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171319.1 In Mycobacterium bovis, an in-frame deletion of 147bp leads to a shorter protein compared to its homolog in Mycobacterium tuberculosis strain H37Rv (466 aa versus 518 aa). In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a deletion of 1bp, splits PPE34 into 2 parts, PPE34a and PPE34b YP_005171320.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 12 bp in-frame insertion leads to a longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (349 aa versus 345 aa) YP_005171321.1 Differs from Rv1842c by 1aa, S437L in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171323.1 similar to Mb1875c, including frameshift at 3'end due to single base insertion, and extensive overlap with guaB1 in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico. In addition, differs from Rv1844c by 2 codon deletion after codon 70 in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171324.1 Differs from Rv1845c and Mb1876c by 1aa, A222V in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171325.1 Differs from Rv1846c by 1aa, Y92D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171326.1 Differs from Rv1847 by 1aa, L90V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171330.1 Differs from Rv1851 by 1aa, L34V in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171333.1 Differs from Rv1854c by 1aa, R313G, and Mb1885c by 2aa, R284W, R313G in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171335.1 Differs from Rv1856c by 1aa, H185R in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171338.1 Differs from Rv1859 by 1aa, M313T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171339.1 Differs from Rv1860 by 1aa, L136F in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171345.1 Differs from Rv1866 by 1aa, Q17E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171347.1 Differs from Rv1868 and Mb1899 by 1aa, G621D in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171348.1 Differs from Mb1900c and Rv1869c by 1aa, P4S in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171349.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base transversion and a single base transition lead to a slightly longer product compared to the homolog in Mycobacterium tuberculosis strain H37Rv (222 aa versus 211 aa) YP_005171351.1 Differs from Rv1872c by 2aa, A59G, A176V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171352.1 Differs from Mb1904 by 1aa, D102N in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171356.1 In Mycobacterium tuberculosis strain H37Rv, Rv1877 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a single base insertion, splits Rv1877 into 2 parts YP_005171357.1 In Mycobacterium tuberculosis strain H37Rv, Rv1877 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a single base insertion, splits Rv1877 into 2 parts YP_005171358.1 similar to Rv1878, differs from Mb1910 by 1aa, A275T in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171363.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 15 bp in-frame insertion leads to a longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (158 aa versus 153 aa) YP_005171366.1 Differs from Rv1886c and Mb1918c by 1aa, L140F YP_005171367.1 Differs from Rv1887 and Mb1919 by 1aa, C121Y in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171368.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 10 bp insertion leads to a longer product with a different COOH part compared to its homolog in Mycobacterium tuberculosis H37Rv (239 aa versus 186 aa) YP_005171376.1 In Mycobacterium tuberculosis strain H37Rv, Rv1895 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, two frameshifts due to a single base deletion and a single base insertion, consecutively, splits Rv1895 into 2 main parts, Mb1928 and Mb1929 YP_005171377.1 In Mycobacterium tuberculosis strain H37Rv, Rv1895 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, two frameshifts due to a single base deletion and a single base insertion, consecutively, splits Rv1895 into 2 main parts, Mb1928 and Mb1929 YP_005171379.1 Differs from Rv1897c and Mb1932c by 1aa, G60D in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171381.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur,BCG Tokyo and BCG Mexico, a 45 bp in-frame insertion leads to a longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (358 aa versus 343 aa) YP_005171382.1 Differs from Rv1900c and Mb1935c by 1aa, M204I and R170Q, respectively, in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171386.1 Differs from Rv1904 by 1aa, M130T in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171387.1 Differs from Rv1905c by 1aa, T240P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, and BCG Tokyo YP_005171390.1 Differs from Rv1908c by 1aa, L463R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171391.1 Differs from Rv1909c and Mb1944c by 1aa, V46A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171394.1 Differs from Rv1912c by 1aa, G328D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171395.1 Differs from Rv1913 and Mb1948 by 1aa, C7R in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171397.1 In Mycobacterium tuberculosis strain H37Rv, aceAa and aceAb exist as 2 genes. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base insertion leads to a single product YP_005171398.1 Equivalent to Mb1951c and Rv1917c but differs by several in-frame insertion and deletion events. Differs from Mb1951c by 69 bp insertion, 69 bp deletion and 225 bp deletion. Differs from Rv1917c by deletions of 12 and 138 bp, insertions of 552 and 150 bp, and substitution of 52bp by 628 bp in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171399.1 In Mycobacterium tuberculosis strain H37Rv, PPE35 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a single base insertion splits PPE35 into 2 parts, PPE35a and PPE35b. Differs from Mb1953c by 1aa, F565V in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico. YP_005171401.1 Differs from Rv1920 by 1aa, I130M in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171404.1 Differs from Rv1923 by 2aa, D73G, N181D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171406.1 Differs from Rv1925 by 1aa, L190M in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171418.1 Differs from Rv1937 by 1aa, P587A in Mycobacterium bovis BCG Mexico YP_005171420.1 In Mycobacterium bovis, a single base deletion leads to a longer product with a different COOH part compared to its homologs in Mycobacterium tuberculosis H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico (244 aa versus 171 aa) YP_005171425.1 Differs from Rv1944c and Mb1979c by 2aa, E4D, A5T, due to 2 bp substitution ta-cc in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171426.1 Differs from Mb1980 and Rv1945 by substitutions of 44, 29, 2, 10 and 34 bp, or 44, 29, 4, 2, 10 and 34 bp, respectively. Corresponding to 10 aa from Rv1945, L242V, N264H, A267G, F268L, A271G, K285R, I291V, N328H, H417K and P426A, and to 9 aa from Mb1980, N264H, A267G, F268L, A271G, K285R, I291V, N328H, H417K and P426A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171427.1 Differs from Rv1946c by 1aa, T98A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171429.1 Differs from Rv1948c by 1aa, R5G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171430.1 Differs from Rv1949c by 1aa, L188F in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171435.1 Differs from Rv1954c by 1aa, R150H in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171446.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur,BCG Tokyo and BCG Mexico, a large deletion of 12719 bp (RD7) leads to the loss of the COOH part of Rv1964|yrbE3A, the entire mce3 operon and the following genes up to Rv1978, compared to Mycobacterium tuberculosis strain H37Rv. Follow by a second deletion of 10287bp, RD2 region (only in Mycobacterium bovis BCG Pasteur and BCG Mexico), which removes genes Rv1979c-Rv1787 and merges truncated part of Rv1978 and Rv1988 compared to Mycobacterium tuberculosis strain H37Rv YP_005171457.1 Differs from Rv1997 and Mb2020 by 1aa, D138E in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171458.1 Differs from Rv1998c by 1aa, R230S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171461.1 Differs from Rv2001 by 1aa, H113R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171466.1 Differs from Rv2006 and Mb2029 by 1aa, S80G and L1245P, respectively, in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171474.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base transition at the 5' start, leads to a longer product with a different NH2 part compared to its homolog in Mycobacterium tuberculosis strain H37Rv (206 aa versus 159 aa) YP_005171475.1 similar to Mb2037 including extra 5 aa at C-terminus compared to Rv2014 in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171476.1 Differs from Mb2038c by 1aa S59L in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171478.1 Differs from Rv2017 by 1aa, E262A in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171479.1 Differs from Rv2018 by 1aa, G116D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171485.1 Belongs to the RvD1 region. Absent in Mycobacterium tuberculosis strain H37Rv YP_005171487.1 Belongs to the RvD1 region. Absent in Mycobacterium tuberculosis strain H37Rv. Differs from Mb2048c by 1aa, E139K in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171488.1 In Mycobacterium tuberculosis strain H37Rv, a large deletion region (RvD1) exists in between Rv2023 and Rv2024. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 5000 bp insertion at this region results in Mb2049c being a much larger product with a different COOH part (1606 aa versus 515 aa), and in 2 extra genes, Mb2046c and Mb2047c. Differs from N-terminal part of Rv2024c (truncated by RvD1) by 3aa, R47W, G154D, C289R and Mb2049c by 1aa, F341V in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171491.1 Differs from Rv2027c by 1aa, V15L in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171494.1 In Mycobacterium tuberculosis strain H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, Rv2030c exists as a single gene. In Mycobacterium bovis, a frameshift due to a single base deletion splits Rv2030c into 2 parts, Mb2055c and Mb2056c YP_005171496.1 Differs from Rv2032 by 1aa, L318P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171500.1 Differs from Rv2036 by 1aa, V93A due to 2bp substitution in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171501.1 Differs from Rv2037c by 1aa, Y312C in Mycobacterium tuberclosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171503.1 Differs from Rv2039c by 1aa, F131V in Mycobacterium tuberclosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171505.1 Differs from Mb2067c by 1aa, A122V in BCG Pasteur and BCG Mexico YP_005171507.1 Differs from Rv2043c by 1aa, D57H in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171510.1 Differs from Rv2046 by 1aa, P17S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171512.1 Differs from Mb2074c and Rv2048c in several positions due to various substitutions, transitions and transversions in BCG Pasteur,BCG Tokyo and BCG Mexico YP_005171525.1 Differs from Rv2062c by 2aa, A75V, C688R and from Mb2088c by 1aa, C688R in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171534.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base insertion leads to a shorter product with a different NH2 part compared to its homolog in Mycobacterium tuberculosis strain H37Rv (231 aa versus 244 aa) YP_005171535.1 Differs from Rv2071c by 1aa, M145I in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171536.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a large 2029 bp deletion (RD9) leads to the loss of the NH2 part of cobL, the entire Rv2073 and Rv2074, and the COOH part of Mb2100c. In addition, while cobL exists as a single gene in Mycobacterium tuberculosis strain H37Rv, in Mycobacterium bovis a frameshift due to a single base insertion splits cobL into 2 parts, cobLa and cobLb YP_005171537.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a large 2029 bp deletion (RD9) leads to the loss of the NH2 part of cobL, the entire Rv2073 and Rv2074, and the COOH part of Mb2100c. In addition, while cobL exists as a single gene in Mycobacterium tuberculosis strain H37Rv, in Mycobacterium bovis a frameshift due to a single base insertion splits cobL into 2 parts, cobLa and cobLb YP_005171538.1 In Mycobacterium bovis AF2122/97, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a large 2029 bp deletion(RD9) leads to the loss of the COOH part of Mb2100c, the entire Rv2074 and Rv2073, and the NH2 part of cobL compared to its homolog in Mycobacterium tuberculosis strain H37Rv YP_005171542.1 Differs from Rv2078 by 1aa, G6E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171543.1 Differs from Rv2079 by 2aa, C47Y, L216P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171544.1 Differs from Rv2080 by 1aa, A23V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171546.1 Differs from Mb2108 (721 aa) and from Rv2082 (721aa) by 26 codon in-frame deletion and from Rv2082 by 2aa, A183T, R612L in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171547.1 Differs from Rv2083 by 1aa, V256L in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171548.1 In Mycobacterium tuberculosis strain H37Rv, Rv2084 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to an 11bp insertion, splits Rv2084 into 2 parts YP_005171556.1 Differs from Rv2092c by 1aa, M178T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171559.1 Differs from Mb2122c by 1aa, A267V in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171562.1 In Mycobacterium tuberculosis strain H37Rv, PE_PGRS36 and PE21 exist as 2 genes. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base insertion leads to a single product more similar to PE_PGRS36. There is also a 3 bp in-frame deletion YP_005171564.1 Differs from Rv2101 by 3aa, L462M, Q601P, S652A in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171571.1 Differs from Rv2109c by 2aa, P135R, G182R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171574.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 57 bp in-frame deletion at the NH2 part, leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (535 aa versus 554 aa) YP_005171575.1 Differs from Mb2137 by 1aa, S278L, and from Rv2113 by 1aa, P207T in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171585.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 27 bp in-frame deletion leads to a slightly shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (464 aa versus 473 aa) YP_005171586.1 Differs from Rv2124c by 1aa, V752I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico; methionine synthase, vitamin-B12 dependent isozyme, MS YP_005171587.1 Differs from Rv2125 by 1aa, S33G in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171590.1 Differs from Rv2127 by 2aa, D9G, S44G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171599.1 Differs from Mb2160c by 1aa L71V in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171601.1 Differs from Mb2162 by 3aa, VQV348-350SRF, due to 7bp substitution in latter, in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171602.1 Differs from Rv2139 and Mb2163 by 1aa, C35R in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171617.1 Differs from Rv2153c by 2aa, L36V, P74L in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171619.1 Differs from Rv2155c by 1aa, G247R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171624.1 In Mycobacterium tuberculosis strain H37Rv, Rv2160A and Rv2160c exist as 2 genes with an overlap region between them. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and bCG Mexico, a 4 bp insertion leads to a single product YP_005171626.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, in-frame deletions of 108 bp and 18 bp leads to a shorter product than in Mycobacterium tuberculosis strain H37Rv (490 aa versus 532 aa) YP_005171628.1 Differs from Mb2188c by 1aa, V202A in Mycobacterium tuberculosis H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171636.1 Differs from Rv2174 and Mb2196 at 3'-end owing to frameshift due to 1 bp insertion, and from Rv2174 by 1aa, S451A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171637.1 Differs from Rv2175c by 1aa, L17P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171638.1 Differs from Rv2176 by 1aa, A52S in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171639.1 Differs from Rv2177c by 1aa, K115T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171640.1 Differs from Rv2178c by 1aa, E265D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171642.1 Differs from Rv2180c by 1aa, T156P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171649.1 In Mycobacterium tuberculosis strain H37Rv, fadD15 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to single base deletion splits fadD15 into 2 parts. YP_005171650.1 In Mycobacterium tuberculosis strain H37Rv, fadD15 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to single base deletion splits fadD15 into 2 parts. Differs from Rv2187 by 2aa, I8T, E287G in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171654.1 Differs from Rv2191 by 1aa, T272A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171658.1 Differs from Rv2195 by 1aa, I281M in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171660.1 Differs from Rv2197c by 1aa, S202A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171671.1 Differs from Rv2208 by 1aa, S155L in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171673.1 Differs from Rv2210c by 1aa, A28E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171676.1 Differs from Rv2213 by 1aa, L210F in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171678.1 Differs from Rv2215 and Mb2238 by 1aa, V517L in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171680.1 Differs from Rv2217 by 1aa, G73D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171682.1 Differs from Rv2219 by 1aa, L74F in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171687.1 Differs from Rv2223c and Mb2247c by 1aa, S307A in BCG Pasteur and BCG Tokyo YP_005171691.1 Differs from Rv2226 and Mb2250 by 1aa, N299D andG31D, respectively, in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171692.1 In Mycobacterium tuberculosis strain H37Rv, Rv2227 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a 1bp to 2bp substitution splits Rv2227 in two parts YP_005171693.1 In Mycobacterium tuberculosis strain H37Rv, Rv2227 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a 1bp to 2bp substitution splits Rv2227 in two parts YP_005171695.1 Differs from Rv2229c by 1aa, Q239R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171701.1 Differs from Rv2236c by 2aa, I5T, C79S in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171705.1 Differs from Rv2240c by 1aa, K259T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171706.1 Differs from Mb2265 by 1aa, G309R in Mycobacterium tuberculosis, BCG Pasteur, BCG Tokio and BCG Mexico YP_005171707.1 Differs from Rv2242 and Mb2266 by 1aa, T363A in BCG Pasteur, BCG Tokyo and Mexico YP_005171713.1 In Mycobacterium bovis and Mycobacterium tuberculosis, Rv2248 and Mb2272 exist as single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, the ortholog is split into two parts owing to single base insertion in G-string YP_005171714.1 In Mycobacterium bovis and Mycobacterium tuberculosis, Rv2248 and Mb2272 exist as single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, the ortholog is split into two parts owing to single base insertion in G-string YP_005171716.1 Differs from Mb2274c by 1aa, D68A in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171717.1 In Mycobacterium tuberculosis H37Rv, Rv2250A and Rv2251 exist as 2 genes with an overlap region between them. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base deletion leads to a single product YP_005171719.1 Possible secreted unknown protein YP_005171720.1 Differs from Rv2254c by 1aa, V68A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171722.1 Differs from Rv2256c by 1aa, G26A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171727.1 In Mycobacterium tuberculosis strain H37Rv, Rv2262cand Rv2261c exist as 2 genes. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 2 bp deletion results in a single product YP_005171733.1 Differs from Rv2268c and Mb2291c by 1aa, F203L in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171735.1 Differs from Mb2293 by 1aa, P152L in Mycobacterium tuberculosis H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171739.1 Differs from Rv2274c by 1aa, M33I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171740.1 Differs from Rv2275 and Mb2298 by 1aa, A261E in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171742.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 1358 bp deletion containing an IS6110 sequence, disrupts the 5' start of Rv2277c resulting in a slightly shorter product compared to the homolog in Mycobacterium tuberculosis strain H37Rv (299 aa versus 301 aa). Differs from Mb2300c by 1aa in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171749.1 In Mycobacterium tuberculosis strain H37Rv, Rv2286c exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, an in-frame stop codon due to a single base transition splits Rv2286c into 2 parts YP_005171750.1 In Mycobacterium tuberculosis strain H37Rv, Rv2286c exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, an in-frame stop codon due to a single base transition splits Rv2286c into 2 parts YP_005171754.1 In Mycobacterium tuberculosis strain H37Rv, Rv2290 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a single base deletion, splits lppO into 2 parts, lppOa and lppOb YP_005171755.1 In Mycobacterium tuberculosis strain H37Rv, Rv2290 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a single base deletion, splits lppO into 2 parts, lppOa and lppOb YP_005171756.1 In Mycobacterium bovis, truncation at the 5' start due to a 2 bp deletion, leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico (256 aa versus 284 aa). Differs from Rv2291 by 1aa, A262E YP_005171757.1 In Mycobacterium tuberculosis strain H37Rv, Rv2293c and Rv2292c exist as 2 genes. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base insertion results in a single product YP_005171769.1 Differs from Rv2305 by 1aa, D148G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171770.1 Differs from Rv2306A by 1aa, V47I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171772.1 Differs from Rv2307c by 2aa, T24M, W235R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171776.1 Differs from Rv2308 by 1aa, V43G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171779.1 Differs from Rv2309A by 1aa, K53E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171786.1 Differs from Rv2316 by 1aa, L126V in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171788.1 Differs from Rv2318 by 1aa, V354L in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171789.1 Differs from Rv2319c and Mb2346c by 1aa, G105E in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171793.1 Differs from Rv2323c by 1aa, T113A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171800.1 Differs from Rv2330c and Mb2357c by 1aa, A97S in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171802.1 Differs from Rv2331A by 1aa, L46I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171803.1 Differs from Rv2332 by 2aa, D62E, L329I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171804.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, single base insertion leads to a slightly longer product with a different COOH part compared to its homolog in Mycobacterium tuberculosis strain H37Rv (523 aa versus 537 aa). Also differs from Rv2333c by 2aa, Y69D, Q503H in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171808.1 Differs from Rv2337c by 1aa, V119G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171810.1 In Mycobacterium tuberculosis strain H37Rv, mmpL9 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base transition splits mmpL9 into 2 parts, mmpL9a and mmpL9b YP_005171811.1 In Mycobacterium tuberculosis strain H37Rv, mmpL9 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base transition splits mmpL9 into 2 parts, mmpL9a and mmpL9b YP_005171812.1 Differs from Rv2340c and Mb2369c by 1aa, T222D in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171815.1 Differs from Rv2343c and Mb2372c by 1aa, R589G in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171818.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a large 8963 bp deletion (RD5) leads to the loss of the NH2 part of Rv2346c, and the 9 following CDSs up to Rv2356 including the 3 phospolipases C enzymes plcC, plcB and plcA, compared to the homolog in Mycobacterium tuberculosis H37Rv YP_005171819.1 Compared to Mycobacterium bovis, there has been a 2579bp bp deletion, this has resulted in an in-frame fusion of the 5'-end of PPE40 with the 3'-end of PPE71 probably due to a homologous recombination event between codons 68 and 174 of PPE40 as the PPE40 and PPE71 genes have identical 5'-ends. Differs from Mb2376c(PPE71) by extra 11aa, insertion of A at position 68 due to 3bp insertion (present in PPE40) and STNVGSGNIG at position 307 due to 30 bp insertion. M. bovis BCG Pasteur, BCG Tokyo and BCG Mexico thus has three copies of tandem repeat STNVGSGNIG compared to two in Mb2376c. The 3'-end of PPE71 of M. bovis BCG Pasteur, BCG Tokyo and BCG Mexico have also been truncated as a result of the same deletion described in In Mycobacterium bovis, 8963 bp deletion (RD5) YP_005171822.1 Differs from Rv2359 by 1aa, R64H in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171823.1 Differs from Rv2360c by 1aa, T66A in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171837.1 Differs from Rv2374c and Mb2395c by 1aa, Q79R in BCG Pasteur, BCG Tokio and BCG Mexico YP_005171840.1 Differs from Rv2377c by 1aa, A69V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171842.1 Differs from Rv2379c by 1aa, D589E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171846.1 Differs from Rv2383c by 2aa, Q264R, P1253T, and from Mb2404c by 1aa, P1253T BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171852.1 Differs from Rv2388c, by 1aa, T184A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171854.1 Differs from Mb2411c by 1aa, I33T in Mycobacterium tuberculosis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171857.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, duplication of 54 bp segment after codon 3 leads to additional 18 aa and two tandem copies of motif PATMQSAAMLRSGAIEAP, compared to its ortholog in Mycobacterium tuberculosis strain H37Rv and in Mycobacterium bovis AF2122/97 YP_005171858.1 Differs from Rv2394 by 1aa Q396R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171859.1 In Mycobacterium tuberculosis strain H37Rv, Rv2395 exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, as in Mycobacterium bovis, a frameshift due to a single base insertion splits Rv2395 into 2 parts. The frameshift occurs after the 44th codon YP_005171860.1 In Mycobacterium tuberculosis strain H37Rv, Rv2395 exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a frameshift due to a single base insertion splits Rv2395 into 2 parts. BCG_2410 also differs from Rv2395 by 1aa, P396S in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171861.1 similar to Mb2418 of Mycobacterium bovis, including 3 bp deletion that leads to a slightly shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (360 aa versus 361 aa) due to deletion of A95 in BCG Pasteur, BCG Tokyo and BCG Mexico. Also differs from Rv2396 by 2aa, N26S, S324N in BCG Pasteur and BCG Mexico. Differs from Rv2396 by 3aa, N26S, C218G, S324N in BCG Tokyo YP_005171863.1 Differs from Rv2398c by 1aa, A141G, and from Mb2420c by 1aa, R264H in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171869.1 Differs from Rv2403c by 1aa, L127V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171873.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 21 bp in-frame insertion leads to a longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (280 aa versus 273 aa). Also differs from both Mb2430 and Rv2407 by 1aa, R222Q in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171880.1 In Mycobacterium bovis, a single base insertion leads to a longer product with a different COOH part compared to its homolog in Mycobacterium tuberculosis H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico (523 aa versus 514 aa) YP_005171881.1 Differs from Rv2415c by 1aa, L291R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171882.1 Differs from Mb2439c by 1aa, T76A in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171885.1 Differs from Mb2442c by 1aa, A165V in Mycobacterium tuberculosis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171886.1 Differs from Rv2420c and Mb2443c by insertion of 1aa, Pro, at position 126 due to 3bp insertion in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171887.1 Differs from Rv2421c by 1aa, S180G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171890.1 In Mycobacterium tuberculosis strain H37Rv, Rv2424c exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a 2bp deletion splits Rv2424c into 2 parts. Differs from Rv2424c by 3aa, I172T, A173T and Y192H YP_005171891.1 In Mycobacterium tuberculosis strain H37Rv, Rv2424c exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a 2bp deletion splits Rv2424c into 2 parts YP_005171893.1 Differs from Rv2426c by 1aa, L113F in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171903.1 Differs from Rv2436 by 2aa, V274A, A282V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171907.1 Differs from Rv2439c by 1aa, S226A in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171917.1 Differs from Rv2449c and Mb2476c by 1aa, C273R in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171918.1 Differs from Rv2450c by 1aa, Q126R in BCG Pasteur and BCG Mexico YP_005171919.1 Differs from Rv2451 by 1aa, D63N in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171925.1 Differs from Rv2457c and Mb2484c by 1aa, A229G in BCG Pasteur, BCG Tokyo and BCG Mexico. Also differs from Rv2457c and Mb2484c by 1aa, A403V in BCG Mexico YP_005171926.1 Differs from Rv2458 by 1aa, C125Y in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171927.1 Differs from Mb2486 by 1aa, M55I in Mycobacterium tuberculosis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171930.1 Differs from Rv2462c by 1aa, L118P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171935.1 Differs from Rv2467 and Mb2494 by 1aa, M18I in Mycobacterium bovis BCG Pasteur YP_005171938.1 Differs from Rv2469c by 2aa, G28S, S99A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171939.1 Oxygen-binding protein YP_005171940.1 Differs from Rv2471 by 1aa, S206W in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171943.1 Differs from Mb2501c by 1aa, A30V in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171945.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 3 bp deletion leads to a slightly shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (1623 aa versus 1624 aa). Differs from Rv2476c by 2aa, loss of A501 due to 3 bp deletion and G1042S YP_005171946.1 Differs from Rv2477c and Mb2504c by 1aa, K372T in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171949.1 Differs from Rv2482c by 1aa, R778C, and from Mb2507c by 1aa, N579S in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171950.1 Differs from Rv2483c by 1aa, G189C in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico; putative L-3-phosphoserine phosphatase, 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005171951.1 Differs from Rv2484c by 1aa, D466G in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171954.1 In Mycobacterium tuberculosis strain H37Rv, PE_PGRS42 exists as a single gene. In Mycobacterium bovis, 2 frameshifts, the first due to a single base insertion and the second due to a single base deletion splits PE_PGRS42 into 3 parts, PE_PGRS42a and PE_PGRS42b and PE_PGRS42d while in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, PE_PGRS42a and PE_GRRS42b are fused YP_005171955.1 Differs from Rv2488c and Mb2515c by 1aa E535D in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171957.1 In Mycobacterium tuberculosis strain H37Rv, PE_PGRS43 exists as a single gene. In Mycobacterium bovis, a frameshift due to a 8 bp insertion splits PE_PGRS43 into 2 parts, PE_PGRS43a and PE_PGRS43b while in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 1bp insertion causes a different frameshift but at same place, 3bp:GCC deletion in BCG Pasteur and BCG Mexico after 2409:G of Mycobacterium bovis, 1bp:T deletion in BCG Tokyo at 2931:T of Mycobacterium bovis YP_005171958.1 In Mycobacterium tuberculosis strain H37Rv, PE_PGRS43 exists as a single gene. In Mycobacterium bovis, a frameshift due to a 8 bp insertion splits PE_PGRS43 into 2 parts, PE_PGRS43a and PE_PGRS43b while in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 1bp insertion causes a different frameshift but at same place, 3bp:GCC deletion in BCG Pasteur and BCG Mexico after 2409:G of Mycobacterium bovis, 1bp:T deletion in BCG Tokyo at 2931:T of Mycobacterium bovis. YP_005171961.1 Differs from Rv2492 by 1aa, D70A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171964.1 Differs from Rv2495c by 2aa, A107T, W208R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171965.1 Differs from Rv2496c by 1aa, S201G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171971.1 Differs from Rv2502c by 2aa, S77G, L343F in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171974.1 Differs from Rv2505c and Mb2533c by 1aa, A381T in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171983.1 Differs from Rv2513 by 1aa, K122T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171989.1 similar to Rv2519 but differs from Mb2548 by 1aa, G173A, due to 2bp substitution in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171991.1 Differs from Mb2550 by 1aa, V122M in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171998.1 Differs from Rv2528c by 1aa, L94P, and Mb2557c by 2aa, L94P, E259Q in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005171999.1 Differs from Mb2558 by 1aa, G94E in Mycobacterium tuberculosis H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172004.1 Differs from Rv2533c by 1aa, D19A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172013.1 Differs from Rv2542 by 1aa, A211T in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172015.1 In Mycobacterium bovis, Mycobacterium bovisBCG Pasteur, BCG Tokyo and BCG Mexico, there is a 656 bp insertion, relative to Mycobacterium tuberculosis strain H37Rv, which leads to lppR gene, probably by duplication of llpA or lppB YP_005172025.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base deletion leads to a shorter product compared to Mycobacterium tuberculosis strain H37Rv (260 aa versus 269 aa) YP_005172028.1 Differs from Rv2555c by 1aa, N226K in Mycobacterium bovis BCG Pasteur, BCG Tokio and BCG Mexico YP_005172032.1 Differs from Rv2559c by 1aa, D317G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172033.1 Differs from Rv2560 by 1aa, L210V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172034.1 In Mycobacterium tuberculosis strain H37Rv, Rv2561 and Rv2562 exist as 2 genes. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base deletion results in a single product which is more similar to Rv2561 YP_005172038.1 In Mycobacterium tuberculosis strain H37Rv, Rv2566 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a 2bp deletion splits Rv2566 into 2 parts. Differs from first part of Rv2566 by 3aa, S10G, S270A, L315V and from Mb2595 by 1aa, L315V in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172039.1 In Mycobacterium tuberculosis strain H37Rv, Rv2566 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a 2bp deletion splits Rv2566 into 2 parts. Differs from Rv2566 by 2aa, P67L, E326G, and from Mb2596 by 1aa, E326G in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172040.1 Differs from Rv2567 by 1aa, R645Q in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172044.1 Differs from Rv2571c and Mb2601c by 1aa, C68R in Mycobacterium bovis BCG Pasteur YP_005172045.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico and Mycobacterium bovis, a single base deletion omitting a stop codon, leads to a longer protein with a different COOH end compared to its homolog in Mycobacterium tuberculosis strain H37Rv (611 aa versus 596 aa). Differs from Rv2572c by 1aa, V515A in in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172050.1 In Mycobacterium tuberculosis strain H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, Rv2577 exists as a single gene. In Mycobacterium bovis, a frameshift due to a single base transition splits Rv2577 into 2 parts, Mb2607 and Mb2608 YP_005172052.1 Differs from Rv2579 by 1aa, Q293T, and from Mb2610by 1aa, A96T in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172055.1 Differs from Rv2582 by 1aa, F66V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172057.1 Differs from Rv2584c by 1aa, E147A in Mycobacterium tuberculosis CCDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172058.1 Differs from Rv2585c by 1aa, S462C in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172059.1 Differs from Rv2586c by 2aa, T309A, P434T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172060.1 Differs from Mb2618c by 1aa, N493S in Mycobacterium tuberculosis H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172063.1 Differs from Rv2590 by 1aa, Y309F, and from Mb2621 by 1aa, A1106T in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172064.1 Differs from Rv2591 by extra 3 aa resulting from same 9 bp in-frame insertion as in Mycobacterium bovis and by 2aa S415G, D463G in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172069.1 Differs from Rv2596 by 1aa, R77C in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172072.1 Differs from Rv2599 by 1aa, I12S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172073.1 First 64 aa similar to N-terminal part of Rv2600 and Mb2631 but then frameshifts due to 10bp deletion. Results in BCG Pasteur, BCG Tokyo and BCG Mexico orthologs of Mb2631 and Rv2600 being in two parts YP_005172074.1 All 59aa are similar to C-terminal part of Rv2600 and Mb2631 owing to frameshifts due to 10bp deletion. Results in BCG Pasteur, BCG Tokyo and BCG Mexico orthologs of Mb2631 and Rv2600 being in two parts, both of which encode hydrophobic proteins YP_005172080.1 Differs from Rv2605c by 1aa, L85F in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172083.1 Differs from Rv2608 by 1aa, S281P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172086.1 Differs from Rv2611c by 2aa, M102I, C197S in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172090.1 In Mycobacterium bovis, a 9 bp in-frame insertion leads to a slightly longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (464 aa versus 461 aa). In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 7bp deletion splits PE_PGRS45 in two parts YP_005172091.1 In Mycobacterium bovis, a 9 bp in-frame insertion leads to a slightly longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (464 aa versus 461 aa). In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 7bp deletion splits PE_PGRS45 in two parts. Differs from Rv2615c by 1aa, V40A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172092.1 Differs from Rv2616 by 1aa, I72V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172097.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a 3 bp deletion leads to a slightly shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (223 aa versus 224 aa) due to deletion of 1aa after position 194 YP_005172103.1 Differs from Rv2627c by 1aa, G104R in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172104.1 Differs from Rv2628 by 1aa, L59S, and from Mb2661 by 1aa, P68R in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172111.1 In Mycobacterium bovis BCG Pasteur,BCG Tokio and BCG Mexico an in-frame insertion of 66 bp, leads to a longer product compared to Mycobacterium bovis and Mycobacterium tuberculosis strain H37Rv (800 aa versus 778 aa) YP_005172120.1 Differs from Rv2643 by 1 aa A455V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172122.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a large 10982 bp deletion (RD11 region) leads to deletion of genes between Rv2645 and Rv2659c compared to Mycobacterium tuberculosis strain H37Rv YP_005172131.1 Differs from Rv2668 by 2aa R3H and K162E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172135.1 Differs from Rv2672 by 1aa D317H in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172141.1 Differs from Mb2697c by 1aa A269G in Mycobacterium tuberculosis H37Rv, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172144.1 Differs from Rv2681 by 1aa V196A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172146.1 Differs from Rv2683 by 1aa, S84L in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172148.1 Differs from Rv2685 by 1aa, G378A and Mb2704, by 1aa, G393C in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172151.1 Differs from Rv2688c by 1aa, T156P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172153.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base transition leads to a slightly longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (663 aa versus 657aa) YP_005172154.1 Differs from Rv2691 by 1aa, A117T in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172155.1 Differs from Rv2692 by 1aa, V133I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172157.1 Differs from Rv2694c by 1aa, S68R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172159.1 Differs from Rv2696c by 1aa, N164D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172165.1 Differs from Rv2702 by 1aa, T203I in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172172.1 Differs from Rv2709 by 1aa, S35T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172177.1 Differs from Rv2714 by 2aa, W181S, A245V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172182.1 Differs from Rv2719c by 1aa, H124Y in Mycobacteium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172183.1 Differs from Rv2720 by 1aa, A98V by Mycobacterium bovis BCG Pasteur, BCG Tokio and BCG Mexico YP_005172184.1 Differs from Rv2721c and Mb2740c by 2aa, S251G, A326T in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172187.1 Differs from Rv2724c by 1aa, T127I, and from Mb2743c by 1aa, P33A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172188.1 Differs from Rv2725c and Mb2744c by 1aa, D218G in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172192.1 Differs from Rv2729c by 3aa, L41F, E202A, V266A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172205.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo,BCG Mexico and Mycobacterium bovis, deletions of a single base leads to frameshifted products PE_PGRS47a (10 aa) and PE_PGRS47b (424 aa), respectively YP_005172206.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, deletions of a single base and of 84 bp leads to a shorter product with a different 5' start compared to its homolog in Mycobacterium tuberculosis strain H37Rv. Also has lost 174 bp compared to Mb2761 YP_005172207.1 In Mycobacterium tuberculosis strain H37Rv, Rv2742c exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a frameshift due to a 23bp insertion splits Rv2742c into two parts YP_005172208.1 In Mycobacterium tuberculosis strain H37Rv, Rv2742c exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a frameshift due to a 23bp insertion splits Rv2742c into two parts YP_005172210.1 Differs from Mb2765c by 1aa, K153Q in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172222.1 Differs from Rv2756c by 1aa, P306L in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172228.1 In Mycobacterium tuberculosis strain H37Rv, Rv2762c exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base transition splits Rv2762c into 2 parts YP_005172229.1 In Mycobacterium tuberculosis strain H37Rv, Rv2762c exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base transition splits Rv2762c into 2 parts YP_005172232.1 Differs from Rv2765 and Mb2787 by 1aa, I129M in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172234.1 Differs from Rv2767c and Mb2789c by 1aa, L26S in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172235.1 Differs from Rv2768c by 1aa, R263P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172236.1 Differs from Rv2769c by 2aa, S54P, M270V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172237.1 Differs from Rv2770c by 1aa, S194F in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172238.1 Differs from Rv2771c by 1aa, P80L in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172240.1 Differs from Rv2773c by 1aa, I204T, and from Mb2795c by 1aa, D138E in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172246.1 In Mycobacterium bovis, a 24 bp deletion leads to a shorter product compared to its homolog in Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium tuberculosis strain H37Rv (171 aa versus 179 aa) Differs from Rv2779c by 1aa, I9M, and 8 aa longer than Mb2801c YP_005172247.1 In Mycobacterium tuberculosis strain H37Rv, ald exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Tokio and in Mycobacterium bovis, a frameshift due to a single base deletion splits ald into 2 parts, alda and aldb YP_005172248.1 In Mycobacterium tuberculosis strain H37Rv, ald exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and in Mycobacterium bovis, a frameshift due to a single base deletion splits ald into 2 parts, alda and aldb YP_005172255.1 Differs from Rv2787 and Mb2810 by 1aa, P78T in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172256.1 Differs from Rv2788 by 1aa, A137D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172260.1 Differs from Mb2815c by 2aa, A17V, T80E in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172262.1 Differs from Rv2794c by 1aa, V87M in Mycobacterium tuberculosis CDC1551 in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172264.1 Differs from Rv2796c by 1aa, F159C in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172272.1 Differs from Rv2804c by 2aa, T58A, V74A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172273.1 Differs from Rv2805 by 1aa, D4G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172275.1 Differs from Rv2807 by 2aa, V72E, T349M, and from Mb2830 by 1aa, T349M in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172277.1 Differs from Rv2809 by 1aa, P46T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172279.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium tuberculosis strain H37Rv, Rv2812 exists as a single gene. In Mycobacterium bovis, a frameshift due to a 2 bp deletion splits Rv2812 into 2 parts, Mb2835 and Mb2836. Differs from Rv2812 by 1 aa, G395R YP_005172280.1 Differs from Rv2813 by 1aa, V76I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172285.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base transition introduces a premature stop codon that leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (336 aa versus 382 aa) YP_005172290.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 9 bp insertion leads to a longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv YP_005172291.1 Differs from Mb2848c by 1aa H56P in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172292.1 Differs from Rv2825c by 5aa, E2K, C162S, L189V, Q192T, E195A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172295.1 Differs from Mb2852c by 1aa E58A in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172298.1 Differs from Rv2830c by 1aa, V56A in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172299.1 Differs from Mb2855 by 1aa, R227C in Mycobacterium tuberculosis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172300.1 Differs from Rv2832c and Mb2856c by 1aa, L235F in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172301.1 In mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base mutation at corresponding position 3093840, in Mycobacterium tuberculosis H37Rv strain, leads to a stop codon and break ugpB in two parts. Differs from Rv2833c by 2aa, I111S, L174P in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172303.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium tuberculosis strain H37Rv, ugpA exists as a single gene. In Mycobacterium bovis, a frameshift due to a single base deletion splits ugpA into 2 parts, ugpAa and ugpAb YP_005172304.1 Differs from Rv2836c by 2aa, H157Q, L350P, and from Mb2861c by 1aa, H157Q in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172313.1 Differs from Rv2845c by 2aa, R177H, T232A in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172314.1 Differs from Rv2846c by 1aa, R15T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172317.1 Differs from Rv2849c by 1aa C120W in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172318.1 Differs from Rv2850c by 2aa, Q273R, S446G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172321.1 Differs from Rv2853 by 3aa, N227K, G228R, D232G, and 18aa deletion, and from Mb2878 by 1aa, D184G, and same 18aa deletion in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172332.1 Differs from Rv2862c by 2aa, P18R, R50C in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172338.1 Differs from Mb2893c by 1aa, D373A in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172339.1 Differs from Mb2894c by 1aa, T330A, and from Rv2869c by 2aa, F259V, T330A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172342.1 Differs from Rv2872 and Mb2897 by 1aa, T72A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172345.1 Differs from Rv2874 by 1aa, D672Y in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172347.1 Differs from Mb2901 by 1aa, D101G, and from Rv2876 by 2aa, R44W, D101G in BCG Pasteur and BCG Mexico YP_005172348.1 Differs from Rv2877c by 1aa, H35Y in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172350.1 In Mycobacterium tuberculosis strain H37Rv, Rv2880cand Rv2879c exist as 2 genes. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base deletion leads to a single product YP_005172352.1 Differs from Mb2906c and Rv2882c by 1aa, L50P in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172355.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base insertion leads to a truncation resulting in a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (439 aa versus 460 aa) YP_005172359.1 Differs from Rv2889c by 1aa, M259T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172366.1 Differs from Rv2896c by 2aa, G57E, A153S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172372.1 Differs from Mb2926c by 1aa, R106H in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172373.1 Differs from Rv2903c by 1aa, N2564D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172387.1 Differs from Rv2917 by 1aa, L594R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172388.1 Differs from Rv2918c by 1aa, W494R and Mb2942c by 1aa, L223R in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172392.1 Differs from Rv2922c by 2aa, R364L, G698R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172401.1 Differs from Rv2930 by 1aa, V240M in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172402.1 Differs from Rv2931 at several positions in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172403.1 Differs from Mb2957 and Rv2932 at several positions in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172405.1 Differs from Rv2934 at several positions in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172406.1 Differs from Rv2935 at several positions in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172407.1 Differs from Rv2936 by 1aa, D309H in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172412.1 Differs from Mb2966 by 1aa, S2I, and Rv2941 by 1aa, R53Q in BCG Pasteur, BCG Tokio and BCG Mexico YP_005172417.1 In Mycobacterium tuberculosis H37Rv, pks1 and pks15 exist as 2 genes. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base insertion results in a single product that is more similar to pks1. Differs from Rv2946c by 2aa, G1779V, V1859A, and from Rv2947c by 2aa, A333V, R374G in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172420.1 Differs from Rv2950c by 1aa, T402A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172424.1 Differs from Rv2954c and Mb2978c by 1aa, Q194R in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172425.1 Differs from Rv2955c by 1aa, H27R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172426.1 Differs from Rv2956 by 1aa, T237I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172428.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a frameshift due to a single base insertion leads to a shorter product with a different COOH part compared to its homolog in Mycobacterium tuberculosis strain H37Rv YP_005172442.1 Differs from Rv2971 by 1aa, H152N in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172444.1 Differs from Rv2973c and Mb2998c by 1aa, A6D in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172445.1 In Mycobacterium tuberculosis H37Rv, Rv2975c and Rv2974c exist as 2 genes. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a 2 bp deletion results in a single product that is more similar to Rv2974c YP_005172450.1 Differs from Rv2979c by 3aa, R14P, A79T, G151D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172452.1 In Mycobacterium bovis, a 9 bp deletion leads to a shorter product compared to its homolog in Mycobacterium bovis BCG Pasteur, BCG Mexico and in Mycobacterium tuberculosis strain H37Rv (370 aa versus 373 aa). Differs from Rv2981c by 1aa, A365T, and from Mb3005c by insertion of 3aa, pos:7-9 YP_005172453.1 Differs from Rv2982c by 1aa, A133P in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172457.1 Differs from Rv2986c and Mb3010c by 9aa deletion at position 137 in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172459.1 Differs from Rv2988c by 1aa, E343D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172461.1 Differs from Mb3014c by 1aa, A217E in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172462.1 Differs from Rv2991 by 1aa, T93A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172463.1 Differs from Rv2992c and Mb3016c by 1aa, A420V in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172466.1 Differs from Rv2995c by 1aa L185F in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172468.1 Differs from Rv2997 by 1aa S108C in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172471.1 Differs from Rv2999 by 1aa, L212M in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172474.1 Differs from Rv3002c and Mb3027c by 1aa, I50T in BCG Pasteur YP_005172478.1 Differs from Rv3006 by 1aa, D219G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172483.1 Differs from Rv3011c by 3aa, T25A, V59I, L420M in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172490.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a 56 bp deletion leads to a products lightly different at the N-terminus part compared to its homolog in Mycobacterium tuberculosis strain H37Rv (434 aa versus 437 aa). Differs from Rv3018c by 1aa, A53V, and Mb3043c by 1aa, L328V in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172495.1 In Mycobacterium tuberculosis H37Rv, PPE47 and PPE48 exist as 2 separate genes. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base insertion leads to a single product. YP_005172497.1 Differs from Rv3023c by 1aa T9A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172502.1 Differs from Rv3028c by 1aa, V312A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172506.1 Differs from Rv3032 and Mb3058 by 1aa, P380Q in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172511.1 Differs from Mb3062c by 1aa, Q63R in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172512.1 Differs from Rv3037c by 1aa, A7D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172517.1 Differs from Rv3042c by 2aa, S70A, E116G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172535.1 Differs from Mb3085 by 1aa, E44K and Rv3059 by 2aa, E44K, G445D in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172537.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium tuberculosis strain H37Rv, fadE22 exists as a single gene. In Mycobacterium bovis, a frameshift due to a single base insertion splits fadE22 into 2 parts, fadE22a and fadE22b. Differs from Mb3087c and from Rv3061c by 2aa, E488K, C497S in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172538.1 Differs from Rv3062 by 1aa, S91P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172539.1 Differs from Rv3063 by 3aa, C402G, S559R, P600L in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172543.1 Differs from Rv3067 and Mb3094 by 1aa A3T in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172553.1 Differs from Rv3077 by 1aa R311G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172556.1 Differs from Rv3080c by 1aa, V217A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172557.1 Differs from Rv3081 and Mb3108 by 1aa, A108V in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172558.1 Differs from Rv3082c by 1aa, C322R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172559.1 Differs from Mb3110 by 1aa, S81I and from Rv3083 by 2aa, S81I, I94V in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172560.1 Differs from Rv3084 and Mb3111 by 1aa, G276S in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172563.1 Differs from Rv3087 by 1aa, V447L, and from Mb3114 by 1aa, T158A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172568.1 Differs from Mb3119c by 1 aa, I237M in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172569.1 Differs from Rv3093c by 1aa W210C in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172572.1 Differs from Rv3097 by 1aa G28E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172573.1 Differs from Rv3097c by 1aa A58G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172574.1 Differs from Rv3098c by 1aa E117D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172577.1 Differs from Rv3101c by 1aa, S171N in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172582.1 Differs from Rv3106 by 2aa, I141V, D385N in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172584.1 Differs from Mb3135 by 1aa I145V in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172585.1 Differs from Mb3136 by 1aa, T324A in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172589.1 Differs from Rv3113 by 3aa, C11W, E134G, R191L in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172590.1 Differs from Rv3114 by 1aa, P11S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172593.1 In Mycobacterium bovis BCG Pasteur, BCG Tokio, BCG Mexico and Mycobacterium bovis, a large deletion of 2775 bp (RD12) leads to the loss of the COOH part of cysA3, the following CDSs, sseC1, moaE1, Rv3120 and a large part of cyp141 except the COOH end, compared to the homolog in Mycobacterium tuberculosis strain H37Rv YP_005172594.1 Differs from Rv3122 by 1aa, S156R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172595.1 Differs from Rv3123 by 1aa, Q40R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172596.1 Differs from Rv3124 and Mb3147 by 1aa, G159E in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172597.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, PPE49 has incurred a single base deletion in codon 272 compared to Rv3125c and Mb3148c leading to frameshift, and two products of 282 and 104 aa, compared to 391 in others YP_005172598.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, PPE49 has incurred a single base deletion in codon 272 compared to Rv3125c and Mb3148c leading to frameshift, and two products of 282 and 104 aa, compared to 391 in others. Differs from Rv3125c by 1aa, V38A YP_005172600.1 Differs from Rv3127 by 1aa, C95F in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172601.1 In Mycobacterium tuberculosis strain H37Rv, Rv3128c exists as a single gene with an in-frame amber stop codon. In Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico, Rv3128c is split into 2, Mb3151c and Mb3152c YP_005172602.1 In Mycobacterium tuberculosis strain H37Rv, Rv3128c exists as a single gene with an in-frame amber stop codon. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, Rv3128c is split into 2 genes. Differs from Mb3152c by 1aa, V166G in BCG Pasteur and BCG Tokyo YP_005172606.1 Differs from Rv3132c by 1aa, T283I in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172609.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a large 1337 bp insertion (I-RD08) leads to a longer product with a different COOH part compared to its homolog in Mycobacterium tuberculosis strain H37Rv (381 aa versus 132 aa). Differs from Mb3159 by 1aa, K213E in BCG Pasteur and BCG Mexico. Differ from Mb3159 by 1aa, G256E in BCG Tokyo YP_005172611.1 Differs from Rv3137 by 1aa, L168P in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172612.1 Differs from Rv3138 by 2aa, N110S, P271T, and from Mb3162 by 2aa, F257S, P270L in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172616.1 Differs from Mb3166c by 1aa, H133Q in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172618.1 Differs from Rv3144c by 1aa, G226S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172627.1 Differs from Rv3153 by 1aa, A180T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172630.1 Differs from Mb3180 by 1aa F297Y in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172631.1 Differs from Rv3157 by 1aa, I476V, and from Mb3181 by 1aa, G395D in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172633.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, albeit a 2146 bp insertion occurs overlapping the NH2-terminal part, this leads to an Equivalent product, compared to its homolog in Mycobacterium tuberculosis strain H37Rv. Differs from Rv3159c by 2aa, deletion of A64, V87A, and from Mb3183c by 1aa, V87A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172634.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, an insertion of 2146 bp exists between PPE53 and Rv3160c compared to Mycobacterium tuberculosis strain H37Rv. This leads to an additional gene, PPE70 Equivalent to MT3248 from Mycobacterium tuberculosis strain CDC1551. Differs from Mb3184c by 1aa, addition of A64 in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172636.1 Differs from Rv3161c by 1aa, L62V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172637.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a frameshift due to a single base deletion, leads to a longer product with different COOH part compared to its homolog in Mycobacterium tuberculosis strain H37Rv YP_005172638.1 Differs from Mb3188c by 1aa, D341E in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172639.1 Differs from Mb3189c by 1aa, E20G in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172641.1 Differs from Rv3166c and Mb3191c by 1aa, A202S in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172643.1 Differs from Mb3193 by 1aa, W65R in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172649.1 Differs from Rv3174 by 1aa, A9V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172651.1 n Mycobacterium tuberculosis strain H37Rv, mesT exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a frameshift due to a single base deletion splits mesT into 2 parts, mesTa and mesTb. YP_005172652.1 In Mycobacterium tuberculosis strain H37Rv, mesT exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a frameshift due to a single base deletion splits mesT into 2 parts, mesTa and mesTb YP_005172663.1 Differs from Rv3190c by 2aa, P138L, A330V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172666.1 Differs from Rv3193c by 2aa, E356Q, Q843R, and from Mb3215c by 1aa, E356Q in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172675.1 Differs from Rv3199c by 1aa, P237Q in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172676.1 Differs from Rv3200c by 1aa, D12N in Mycobacterium bovis , Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172678.1 Differs from Rv3202c by 1aa, A748V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172681.1 Differs from Rv3204 by 1aa, A34T in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172683.1 Differs from Mb3231c by 1aa, addition of P197 in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172684.1 Differs from Rv3207c by 1aa, N157D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172690.1 Differs from Mb3237 by 1aa, V17A in Mycobacterium tuberculosis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172691.1 Differs from Mb3238 by 1aa, G225D, and from Rv3212 by 2aa, G225D, A250V in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172692.1 Differs from Rv3213c by 1aa, E144K in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172699.1 Differs from Rv3220c by 1aa, N47D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172707.1 Differs from Rv3225c by 1aa T306A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172709.1 Differs from Mb3256 by 1aa, R150H in Mycobacterium tuberculosis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172710.1 Differs from Rv3228, Mb3257 and BCG_3351 by 1aa, D169G in Mycobacterium bovis BCG Pasteur and BCG Mexico YP_005172712.1 Differs from Rv3230c by 1aa, C105R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172713.1 In DU2 of BCG Pasteur and BCG Mexico, the second copy (BCG_3354c) is truncated YP_005172715.1 In Mycobacterium tuberculosis H37Rv, Rv3234c and Rv3233c exist as 2 genes. In Mycobacterium bovis BCG Pasteur, BCG Mexico and Mycobacterium bovis, a single base insertion leads to a single product that is more similar to Rv3234c YP_005172720.1 Differs from Mb3267c by 1aa, R867H in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172723.1 Differs from Rv3242c and Mb3270c by 1aa, S89L in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172725.1 Differs from Rv3244c by 2aa, G142D, L394S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172726.1 Differs from Rv3245c by 1aa, L517M in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172729.1 Differs from Mb3276c by 1aa V189I in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172738.1 Differs from Rv3257c by 1aa, L206S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172746.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, an in-frame deletion of 12 bp leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (297 aa versus 301aa) YP_005172747.1 Differs from Rv3266c by 1aa, P257S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172753.1 Differs from Mb3300 by 1aa, R259G, and from Rv3272 by 2aa, R259G, S347N in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172756.1 Differs from Rv3275c by 1aa, R125G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172758.1 Differs from Rv3277 by 1 aa, L272S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172759.1 Differs from Rv3278c by 1aa, K160E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur and BCG Mexico. Differs from Rv3278c by 2aa, T54I, K160E in Mycobacterium bovis BCG Tokyo. YP_005172760.1 Differs from Rv3279c by 1aa, N211D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico; biotin--[acetyl-CoA-carboxylase] synthetase YP_005172761.1 Differs from Rv3280 by 1aa, A448V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172762.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, an in-frame deletion of 63 bp leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (156 aa versus 177aa). Loss of tandem repeat SRVSGTNEVSDGNETNNPAPV YP_005172763.1 Differs from Rv3282 by 1aa, S133A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and Mexico YP_005172764.1 Differs from Mb3311 by 1aa, G170D in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172769.1 usfY YP_005172772.1 Differs from Rv3291c by 1aa, V22A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172774.1 Differs from Rv3293 by 1aa, C273G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172777.1 Differs from Rv3296 by 3aa, M719V, N818D, E1059K in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur and BCG Mexico. Differs from Rv3296 by 4aa, T719V, M796L, N818D, E1059K in Mycobacterium bovis BCG Tokyo. YP_005172780.1 Differs from Rv3299c by 1aa, S204G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172781.1 Differs from Mb3328c by 1aa, D52N in Mycobacterium tuberculosis H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172782.1 Differs from Rv3301c and Mb3329c by 1aa, S74A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172784.1 In Mycobacterium bovis BCG Pasteur and BCG Mexico, lpdA' is truncated and contains one endpoint of BCG-specific tandem duplication region, DU2. In Mycobacterium bovis, the CDS has 21 codons fewer than Rv3303c due to point mutation introducing stop codon YP_005172785.1 In Mycobacterium bovis BCG Pasteur and BCG Mexico, Mb3333c is truncated compared to its homologs in Mycobacterium tuberculosis strain H37Rv (Rv3213c) and Mycobacterium bovis AF2122/97 (Mb3239c). It contains one endpoint of BCG-specific tandem duplication region, DU2. Differs from Rv3213c by 2aa, E144K and P198L in BCG Pasteur and BCG Mexico YP_005172792.1 Differs from Rv3220c by 1aa, N47D in Mycobacterium bovis BCG Pasteur and BCG Mexico YP_005172800.1 Differs from Rv3225c by 1aa T306A in Mycobacterium bovis BCG Pasteur and BCG Mexico YP_005172802.1 Differs from Mb3256 by 1aa, R150H in BCG Pasteur and BCG Mexico YP_005172803.1 Differs from Rv3228, Mb3257 and BCG_3351 by 1aa, D169G in Mycobacterium bovis BCG Pasteur and BCG Mexico YP_005172805.1 Differs from Rv3230c by 1aa, C105R in Mycobacterium bovis BCG Pasteur and BCG Mexico YP_005172806.1 Internal deletion of DU2 leads to a truncated copy of Rv3231c and of Rv3290c in Mycobacterium bovis BCG Pasteur and BCG Mexico YP_005172807.1 Differs from Rv3291c by 1aa, V22A in Mycobacterium bovis BCG Pasteur and BCG Mexico YP_005172809.1 Differs from Rv3293 by 1aa, C273G in Mycobacterium bovis BCG Pasteur and BCG Mexico YP_005172812.1 Differs from Rv3296 by 3aa, M719V, N818D, E1059K in Mycobacterium bovis BCG Pasteur and BCG Mexico YP_005172815.1 Differs from Rv3299c by 1aa, S204G in Mycobacterium bovis BCG Pasteur and BCG Mexico YP_005172816.1 Differs from Mb3328c by 1aa, D52N in Mycobacterium bovis BCG Pasteur and BCG Mexico YP_005172817.1 Differs from Rv3301c and Mb3329c by 1aa, S74A in BCG Pasteur and BCG Mexico YP_005172819.1 In Mycobacterium bovis BCG Pasteur,BCG Mexico and Mycobacterium bovis, truncation due to a single base transversion results in a shorter product compared to its homolog in Mycobacterium tuberculosis stain H37Rv (471 aa versus 493 aa). Differs from Rv3303c by 2aa, A29T, S308L in Mycobacterium bovis BCG Pasteur and BCG Mexico YP_005172824.1 Differs from Rv3308 by 1aa, G440S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172826.1 Differs from Rv3310 by 1aa, A171T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172832.1 Differs from Rv3314c by 1aa, W309R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172835.1 Differs from Rv3317 by 1aa, L54V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172837.1 Differs from Rv3319 by 1aa, E35D in BCG Pasteur and BCG Mexico, and by 2aa, E35D and T88A in BCG Tokyo YP_005172843.1 Belongs to the RvD5 region. Absent in Mycobacterium tuberculosis strain H37Rv YP_005172844.1 Belongs to the RvD5 region. Absent in Mycobacterium tuberculosis strain H37Rv YP_005172845.1 Belongs to the RvD5 region. Absent in Mycobacterium tuberculosis strain H37Rv but present in CDC1551 (CDS not annotated) YP_005172846.1 Belongs to the RvD5 region. Absent in Mycobacterium tuberculosis strain H37Rv but present in CDC1551 (CDS not annotated) YP_005172847.1 Belongs to the RvD5 region. Absent in Mycobacterium tuberculosis strain H37Rv YP_005172848.1 Belongs to the RvD5 region. Absent from Mycobacterium tuberculosis strain H37Rv YP_005172850.1 Differs from Rv3328c by 1aa, Q41P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172851.1 Differs from Rv3329 by 1aa, H122Q in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172853.1 Differs from Mycobacterium bovis (Mb3364) and Mycobacterium bovis BCG Tokyo by 5aa in-frame deletion at position 465, and from Rv3331 by same deletion and 1aa, L423P in Mycobacterium bovis BCG Pasteur and BCG Mexico YP_005172858.1 Differs from Rv3335c and Mb3368c by 1aa, V86A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172860.1 In Mycobacterium tuberculosis strain H37Rv, Rv3337 and Rv3338 exist as 2 genes with an overlap region between them. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base insertion leads to a single product YP_005172861.1 Differs from Rv3339c and Mb3371c by 1aa, V198A in Mycobacterium bovis BCG Pasteur and BCG Mexico YP_005172862.1 Differs from Rv3340 and Mb3372 by 1aa, G83A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172865.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 3555 bp in-frame deletion (RD19) leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv. Differs from Mb3375c by 1aa, A513V and from Rv3343c by several transitions in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172866.1 In Mycobacterium tuberculosis strain H37Rv, PE_PGRS50 and PE_PGRS49 exists as a single gene. In Mycobacterium bovis, a single base deletion splits PE_PGRS50 into 2 parts, PE_PGRS50a and PE_PGRS50b and a single base deletion leads to PE_PGRS49 and PE_PGRS50b existing as a single product. In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, the first deletion is absent leading to an unique single gene comprising PE_PGRS50 and PE_PGRS49 YP_005172868.1 In Mycobacterium tuberculosis strain H37Rv, PPE55 exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a frameshift due to a single base deletion splits PPE55 into 2 parts, PPE55a and PPE55b. Differs from Rv3347c by many aa substitutions and from Mb3380c by 1 aa, P1089S in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172871.1 In Mycobacterium tuberculosis strain H37Rv, PPE56 exists as a single gene. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, 2 frameshifts due to single base transversion and a single base deletion splits PPE56 into 3 parts, PPE56a, PPE56b and PPE56d. Differs from Rv3350c and Mb3385c by 2aa deletion at position 291 in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172875.1 Differs from Rv3354 by 1aa, A112V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172877.1 Differs from Rv3356c by 1aa, P21Q in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172885.1 Differs from Rv3364c and Mb3399c, by 1aa, L22P in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172888.1 In Mycobacterium bovis, insertions of 105 bp and of 9 bp lead to longer product compared to the homolog in Mycobacterium tuberculosis strain H37Rv (626 aa versus 588 aa). In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, there is no 105 bp insertion but the 9 bp insertion is presentat codon 404. Differs also from Rv3367 by 1aa, S412G in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172891.1 Differs from Rv3370c and Mb3405c by 1aa, S527N in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172892.1 Differs from Rv3371 by 2aa, G339R, V368I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172894.1 In Mycobacterium tuberculosis H37Rv, echA18 and echA18' exist as 2 genes. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base transversion leads to a single product YP_005172897.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a frameshift due to a 4 bp to 3 bp substitution leads to a shorter product with a different COOH part compared to its homolog in Mycobacterium tuberculosis strain H37Rv YP_005172898.1 Differs from Rv3378c and Mb3412c by 1aa, A137V in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172899.1 Differs from Mb3413c by 1aa, T519A, and from Rv3379c by 2aa, T519A and Y196C in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172901.1 Differs from Rv3383c by 1aa, G132V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172906.1 In Mycobacterium bovis and Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, insertions of 60 bp and 78 bp, and deletions of 75 bp and 9 bp, lead to a longer product compared to the homolog in Mycobacterium tuberculosis strain H37Rv (750 aa and 749 aa versus 731 aa). Differs from Mb3420 by 1aa insertion, A205 in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172907.1 Differs from Mb3421c by 1aa, P172L in Mycobacteirum tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172910.1 Differs from Rv3392c by 1aa, S112N in Mycobacteirum bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172913.1 Differs from Rv3395c by 2aa, V3A, M104V in Mycobacteirum bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172918.1 Differs from Rv3399 by 1aa, E330A in Mycobacterium tuberculosis CDC1551, Mycobacteirum bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172920.1 Differs from Mb3434 by 1aa, R658H in Mycobacterium bovis BCG Pasteur and BCG Mexico, and by 2aa, R658H, R750L in Mycobacterium bovis BCG Tokyo YP_005172921.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base transversion leads to a shorter product. Differs from Mb3436c by 1aa, R154C in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172927.1 Differs from Rv3408 by 1aa, L46S in Mycobacteirum bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172944.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a large deletion of 4926 bp (RD6) leads to the loss of the COOH part of PPE57, and the following CDSs, PPE58, Rv3427c, Rv3428c and the NH2-part of PPE59 compared to Mycobacterium tuberculosis strain H37Rv YP_005172945.1 Differs from Mb3460c by 1aa, R233H in Mycobacteirum tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172948.1 Differs from Mb3463c by 1aa, A436 deleted, and from Rv3433c by 2aa, A436 deleted, A442S in Mycobacterium bovis BCG Pasteur and BCG Mexico.Differs from Rv3433c by 1aa, A442S in Mycobacterium bovis BCG Tokyo YP_005172949.1 Differs from Mb3464c by 1aa, A193T in Mycobacteirum tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172952.1 Differs from Rv3437 by 1aa P84L in Mycobacteirum bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172962.1 Differs from Rv3444c by 1 aa, G1082S and Mb3477c by 1 aa G1159S in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172963.1 Differs from Mb3478 by 1aa A265D in Mycobacteirum tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172966.1 Differs from Rv3451 and Mb3481 by deletion of 1aa,262R in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172968.1 In Mycobacterium tuberculosis H37Rv, Rv3453 and Rv3454 exist as 2 genes. In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base deletion results in a single product that is more similar to Rv3454. Differs from Mb3483 by 1aa, V328I in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172973.1 Differs from Rv3459c by 1aa, N135K in Mycobacteirum bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172980.1 Differs from Rv3466 by 4aa, T56A, T63A, L91R, I131V in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172981.1 Differs from Rv3467 by 6aa, E134K, G245A, D262G, R275H, K276N, E315K in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172982.1 Differs from Rv3468c by 1aa, V62I in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172983.1 Differs from Rv3469c and Mb3498c by 1aa, G253D in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172984.1 Differs from Mb3499c by 1aa, G421E in Mycobacterium tuberculosis H37Rv, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172985.1 Differs from Mb3500c by 1aa, C155W in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172988.1 Differs from Rv3476c by 2aa, F81L, V144A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172989.1 Differs from Rv3477 by 1aa, A26V in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172991.1 In Mycobacterium tuberculosis strain H37Rv, Rv3479 exists as a single gene. In Mycobacterium bovis BCG Pasteur, and BCG Tokyo, BCG Mexico and Mycobacterium bovis, a 713 bp deletion (RD18) splits Rv3479 into 2 parts, Mb3507 and Mb3508. Differs from Rv3479 by 1aa, R174L in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172992.1 In Mycobacterium tuberculosis strain H37Rv, Rv3479 exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a 713 bp deletion (RD18) splits Rv3479 into 2 parts, Mb3507 and Mb3508. Differs from Rv3479 by 1aa, N344T in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172993.1 In Mycobacterium tuberculosis strain H37Rv (Rv3480c), BCG Pasteur, BCG Tokyo and BCG Mexico exists as a single gene. In Mycobacterium bovis, a frameshift due to a 2 bp deletion splits Rv3480c into 2 parts, Mb3509c and Mb3510c. Differs from Rv3480c and Mb3510c by 1aa, N205D in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005172995.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base insertion leads to frameshift and longer product of 496 aa compared to Rv3482c, len: 260 aa YP_005173001.1 Differs from Rv3488 by 1aa, R98G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173003.1 Differs from Rv3490 by 1aa, L334V in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173007.1 Differs from Rv3494c by 1aa, G245D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173010.1 Differs from Mb3527c and Rv3497c by 1aa, P46T in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173018.1 Differs from Rv3505 by 1aa V218A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173020.1 In Mycobacterium bovis, insertions of 18 bp, 72 bp and 9 bp, and deletions of 90 bp, 54 bp and 18 bp, and Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, insertions of 18 bp, 81 bp and 9 bp, and deletions of 90 bp, 27 bp and 18 bp, leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (1360 aa and 1372 aa versus 1381 aa). Differs from Mb3537 by 2 insertions of 9aa and 3aa and by 1aa, N599D. Differs from Rv3507 by several insertions, deletions and by 2aa, N599D, G742D in BCG Pasteur and BCG Mexico. Differs from Mb3537 by 2 insertions of 9aa and 3aa in BCG Tokyo. Differs form Rv3507 by several insertions, deletions and by 1aa, G742D in BCG Tokyo. YP_005173021.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, several insertions lead to a longer product compared to its homolog in Mycobacterium bovis (2094 aa in BCG Pasteur and BCG Mexico, and 2055 aa in BCG Tokyo versus 1460 aa). The PE_PGRS54 gene of BCG Tokyo (6153bp) is 132bp shorter than that of BCG Pasteur and BCG Mexico (6285bp). There are two repeats of 465bp in BCG Tokyo and one such repeat in BCG Pasteur and BCG Mexico, as well as three repeats of 552bp in BCG Tokyo and four repeats in BCG Pasteur and BCG Mexico YP_005173024.1 In Mycobacterium tuberculosis H37Rv, PE_PGRS55 and PE_PGRS56 exist as 2 genes. In Mycobacterium bovis, a 344bp insertion results in a single product which is more similar to PE_PGRS55. In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico two deletions of 138bp and 246bp lead to a shorter product compared to its homolog Mycobacterium bovis (1810 aa versus 1938 aa). Also differs from Mb3541 by 3aa, D628A, D743A and D857A. In BCG Tokyo, the PE_PGRS55 gene (5088bp, 1695aa) is 345bp shorter than that of BCG Pasteur and BCG Mexico (5433bp). As 345bp is the length of a repeat in the gene, the difference reflected the copy number of BCG strains YP_005173026.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a deletion of 111 bp and an insertion of 360 bp (361bp in BCG Tokyo) lead to a longer product compared to its homolog Mycobacterium bovis. Also differs from Mb3543 by 2aa, S80L and T93A in BCG Pasteur and BCG Mexico YP_005173028.1 Differs from Rv3516 by 1aa, D86G in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173031.1 In Mycobacterium tuberculosis strain H37Rv, cyp142 exists as a single gene. In Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a single base deletion splits cyp142 into 2 parts, cyp142a and cyp142b YP_005173034.1 Differs from Rv3521 by 1aa D295N in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173035.1 Differs from Rv3522 by 1aa I324T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173061.1 Differs from Rv3548c by 1aa V218M in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173064.1 Differs from Rv3551 by 1aa, S7A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173068.1 Differs from Rv3555c by 1aa R268W in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173072.1 Differs from Rv3559c by 1aa V222A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173074.1 Differs from Rv3561 by 1aa N405T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173076.1 Differs from Rv3563 by 2aa R105Q and S275W in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173081.1 Differs from Rv3567c by 1aa T179I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173082.1 Differs from Mb3599c by 1aa Q177R in Mycobacterium tuberculosis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173084.1 Differs from Rv3570c by 1aa D18N in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173090.1 Differs from Rv3576 by 1aa N118D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173092.1 Differs from Rv3578 by 1aa S319A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173093.1 Differs from Rv3579c by 1aa , A302E in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico. Mb3610c is longer due to frameshift and differs by 1aa V178M in Mycobacterium bovis YP_005173096.1 Differs from Mb3613c by 1aa T92A in Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173100.1 Differs from Rv3586 by 1 aa, D345E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173101.1 Shorter than Rv3587c and Mb3618c by 1aa, P at 240 in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173102.1 Differs from Mb3619c by 1aa I79T in Mycobacterium tuberculosis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173107.1 Differs from Rv3593 by 2 aa, V159A, S186N in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173109.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base deletion and a 27bp insertion (*-GCGCGCCGGGGCCACCGTTTCCGCCGG), lead to a longer product with a different COOH part compared to its homolog in Mycobacterium tuberculosis (492 aa versus 439 aa) YP_005173117.1 Differs from Rv3604c by G153V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173124.1 similar to Rv3611 in BCG Pasteur and BCG Mexico. In Mycobacterium bovis and BCG Tokyo, a 111bp deletion leads to a shorter product compared to its homolog in Mycobacterium tuberculosis (180 aa versus 217aa) YP_005173129.1 Differs from Rv3616c by 2aa, V4A, I192T and Mb3646c by 2aa, V4A, V153A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173130.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a large 5894 bp deletion (RD8) leads to a shorter product with a different NH2 part compared to its homolog in Mycobacterium tuberculosis strain H37Rv (171 aa versus 240 aa) YP_005173134.1 Differs from Rv3627c by 2 aa, V45A, V81A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173137.1 Differs from Rv3630 by 1aa, T40A in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173146.1 Differs from Rv3639c by 1 aa, N53K in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173147.1 Differs from Rv3640c by 1aa, E296G in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173153.1 Differs from Rv3546c and Mb3670c by 1aa, F628L in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173156.1 Differs from Rv3649 by 2aa, P93L, D677G, and from Mb3673 by D677G in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173161.1 In Mycobacterium tuberculosis strain H37Rv, a frameshift due to an in-frame insertion of 126 bp leads to a longer product than in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico. Shorter than Mb3677 due to 18 bp in-frame deletion, removes 6 codons YP_005173163.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base deletion introducing a premature stop codon, leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (99 aa versus 125 aa) YP_005173168.1 Differs from Rv3660c by 1aa, L30P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173169.1 Differs from Rv3661 by 1aa, P40S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173170.1 Differs from Rv3662c by 1aa, T34A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173174.1 Differs from Rv3666c by 2aa, R4Q, Q443R and to Mb3690c by 1aa, E451G in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173176.1 Differs from Mb3691 by 1aa G61E in BCG Pasteur and BCG Mexico YP_005173180.1 Differs from Rv3671c by 3aa, T165N, L359F, V363I and from Mb3695c by 3aa, T165N and L359F in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173185.1 Differs from Rv3676 and Mb 3700 by 2aa, P47L, K178E in Mycobacterium bovis BCG Pasteur and BCG Mexico. Differs from Rv3676 and Mb3700 by 2aa, E178K, V184A in Mycobacterium bovis BCG Tokyo YP_005173192.1 Differs from Rv3682 and MT3784 by 1aa, R434G in Mycobacterium bovis BCG Mexico YP_005173195.1 Differs from Rv3685c by 1aa, Q136E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173197.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, truncation at the 5' start due to a single base transversion leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (81 aa versus 122 aa) YP_005173199.1 Differs from Rv3689 by 1aa, L119V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173206.1 In Mycobacterium tuberculosis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, glpK exists as a single gene. In Mycobacterium bovis, a frameshift due to a single base insertion, splits glpK into 2 parts, glpKa and glpKb and removes activity. Differs from Rv3696c by 2aa, A462V and insertion G192, and from Mycobacterium bovis (gplKb) by 1aa G262A YP_005173207.1 Differs from Rv3697c by 1aa, R34G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173209.1 Differs from Rv3698 by 3aa, I66M, R233P, A288V and from Mb3724 by 1aa, A288V in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173222.1 Protein is 190 aa longer than Rv3710, and 57 aalonger than Mb3737 due to differences in copy number of 19codon repeat at 3'-end YP_005173223.1 Differs from Rv3711c by 3aa, D76G, A164V, L211V in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173224.1 Differs from Rv3712 by 2aa, S200G, T351K in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173231.1 Differs from Rv3719 by 1aa, A12T in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173234.1 Differs from Rv3722c and Mb3749c by 1aa, Y314H in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173236.1 In Mycobacterium tuberculosis, Rv3724A and Rv3724B exist as 2 genes with an overlap region between them. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico a single base deletion leads to a single product YP_005173237.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base insertion leads to a longer product with a different COOH part compared to its homolog in Mycobacterium tuberculosis (333 aa versus 309 aa) YP_005173238.1 Differs from Rv3726 by 1aa, S251R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173239.1 Differs from Rv3727 by 1aa, M86V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173240.1 Differs from Rv3728 by 1aa, R464G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173241.1 Differs from Rv3729 by 2aa, I170V, S269P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173243.1 Differs from Rv3731 by 1aa, H313R in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173248.1 Differs from Rv3736 and Mb3763 by 1aa, K76E in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173249.1 Differs from Rv3737 by 1aa, G40D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173250.1 Differs from Rv3740c by 1aa, C422R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173258.1 Differs from Rv3748 by 1aa, D107G in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173263.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and Mycobacterium bovis, a single base transition leads to a longer product with a different 5' start compared to its homolog in Mycobacterium tuberculosis strain H37Rv(173 aa versus 166 aa) YP_005173269.1 Differs from Rv3759c by 2aa, P85L, V176A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173272.1 Differs from Rv3762c by 1aa, H345Y and from Mb3788c by 1aa, V161G in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173274.1 Differs from Rv3764c by 2aa, R45H, R246C in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173280.1 Differs from Rv3770c by 1aa, A98P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173284.1 Differs from Rv3772 by 1aa, A142T in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173285.1 In Mycobacterium tuberculosis Rv3773c exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a single base insertion splits Rv3773c in two parts YP_005173286.1 In Mycobacterium tuberculosis strain H37Rv, Rv3773c exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a single base insertion splits Rv3773c into 2 parts YP_005173289.1 Differs from Rv3776 by 1aa, V329M in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173290.1 Differs from Rv3777 by 1aa, A160V in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173306.1 Differs from Rv3793 by 1aa, I270T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173308.1 Differs from Rv3795 by 2aa, S13N, A378E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173309.1 Differs from Rv3796 by 1aa, I320T in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173311.1 In Mycobacterium tuberculosis strain H37Rv (Rv3798), Mycobacterium bovis BCG Pasteur (BCG_3860), BCG Tokyo and BCG Mexico, exist as a single gene. In Mycobacterium bovis, a frameshift due to a 11 bp deletion splits Rv3798 into 2 parts, Mb3827 and Mb3828. In Mycobacterium bovis, a frameshift due to a 11 bp deletion splits Rv3798 into 2 parts, Mb3827 and Mb3828 YP_005173313.1 Differs from Rv3800c by 2aa, G523A, N650S and from Mb3829c by 1aa, N650S in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173314.1 Differs from Rv3801c by 1aa, V523A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173318.1 Differs from Rv3805c by 1aa, V327I in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173319.1 Differs from Rv3806c by 2aa, I49V and D149E, and from Mb3836c by 1aa, I49V in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173326.1 Differs from Rv3813c by 1aa, T83M in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173333.1 Differs from Rv3820c by 1aa, I463T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173334.1 Differs from Rv3821 by 2aa, N106D, T120A in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173335.1 Corresponds to Rv3822/Mb3852 but is missing 1bp after codon 122. Differs from Rv3822 by 2aa, Y55C, T103N, in first part (and by 1aa, V92A, in the second part) YP_005173336.1 Corresponds to 3'-part of Rv3822/Mb3852 due to missing bp after codon 122. Differs from Rv3822 by 1aa, V92A (and by 2aa, Y55C, T105N, in first part) YP_005173337.1 Differs from Rv3823c by 2aa, R235G, A526V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173339.1 Differs from Rv3825c and Mb3855c by 1aa, G829V in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173340.1 Differs from Rv3827c by 1aa, A251T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173342.1 Differs from Rv3829c by 1aa, D55E in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173346.1 Differs from Rv3833 by 1aa, I105V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173348.1 Differs from Rv3835 and Mb3865 by 1 aa, Y79N in BCG Pasteur, BCG Tokyo and BCG Mexico, and frameshift due to extra C in C-string that changes C-terminus in BCG Pasteur and BCG Mexico YP_005173349.1 In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base insertion introducing a premature stop codon, leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (116 aa versus 137 aa) YP_005173352.1 Differs from Rv3839 by 1aa, S122P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173356.1 Differs from Rv3843c by 2aa, R11G, H92R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173360.1 Differs from Rv3846 by 1aa, T205I in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173362.1 Differs from Rv3848 by 1aa, I194V in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173372.1 Differs from Rv3858c by 3aa, N377T, A415D, H423R and from Mb3888c by 2aa N377T and A415D in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173373.1 Differs from Rv3859c by 1aa, E553Q in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173374.1 In Mycobacterium bovis BCG Mexico a deletion leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (230 aa versus 392 aa) YP_005173375.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and in Mycobacterium bovis, two in-frame insertion of 36 and 12bp, leads to a longer product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (418 aa versus 402 aa) YP_005173379.1 Differs from Rv3868 by 1aa, V243A in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173382.1 Differs from Rv3871 and Mb3901 by deletion of 101 codons after codon 480 due to BCG-specific RD1 deletion YP_005173384.1 Differs from Rv3881c by 7 codon stretch due to 1bp deletion and 1 bp insertion in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173387.1 Differs from Rv3884c by 1aa, G215E in Mycobacterium tuberculosis CDC1551, Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173388.1 Differs from Rv3885c by 1aa, P133L in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173391.1 Has no counterpart in Mycobacterium bovis owing to deletion of 2405bp YP_005173392.1 Has no counterpart in Mycobacterium bovis owing to deletion of 2405bp YP_005173393.1 In Mycobacterium bovis, a deletion of 2406 bases leads to the loss of the NH2 part of Rv3887c, the entire Rv3888c and the COOH part of Rv3889c compared to Mycobacterium tuberculosis strain H37Rv,Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173394.1 In Mycobacterium bovis BCG Pasteur, BCG Tokyo, BCG Mexico and in Mycobacterium bovis, a frameshift due to a single base deletion leads to a longer product with a different COOH part compared to its homolog in Mycobacterium tuberculosis strain H37Rv (124 aa versus 95 aa) YP_005173395.1 Differs from Rv3891c by 1aa, A49T in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173396.1 Differs from Rv3892c by 2aa, K19T, I206M and from Mb3921c by 1aa I206M in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173398.1 In Mycobacterium tuberculosis, Rv3894c exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a single base insertion, splits Rv3894c into 2 parts YP_005173399.1 In Mycobacterium tuberculosis, Rv3894c exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a single base insertion, splits Rv3894c into 2 parts. Differs from first part of Rv3984c by 1aa, P258R in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173400.1 Differs from Rv3895c by 1aa, G356D in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173401.1 Differs from Rv3896c by 3aa, G83D, V186I, K193Q, and by frameshift due to 1bp deletion leading to shorter product (288 aa versus 302 aa) in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173402.1 In Mycobacterium tuberculosis, Rv3898c and Rv3897c exist as 2 genes. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base transition leads to a single product YP_005173403.1 In Mycobacterium tuberculosis, Rv3899c exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur , BCG Tokyo and BCG Mexico, a frameshift due to a single base deletion splits Rv3899c into 2 parts, Mb3928c and Mb3929c with the former being the more likely product YP_005173404.1 Differs from Rv3900c by 1aa, A18P in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173405.1 Differs from Rv3901c by 1aa, W21L, and frameshift due to 2bp deletion at 3'-end, and from Mb3931c by frameshift only in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173408.1 Differs from Rv3904c by 1aa, V82M in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173409.1 In Mycobacterium bovis, and Mycobacteium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a single base transition introducing a premature stop codon, leads to a shorter product compared to its homolog in Mycobacterium tuberculosis strain H37Rv (57 aa versus 103 aa) YP_005173413.1 Differs from Rv3909 by 3aa, R7G, S399N, V538A and from Mb3939 by 1aa G25A in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173414.1 Differs from Rv3910 by 1aa, A480V in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173415.1 In Mycobacterium tuberculosis, sigM exists as a single gene. In Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico, a frameshift due to a 2bp to 1bp substitution splits sigM into 2 parts, sigMa and sigMb. Differs from Mb3941 by 1aa A160S in BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173417.1 Differs from Rv3913 by 1aa, G57D in Mycobacterium bovis, BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173423.1 Differs from Rv3919c by 1aa, F100S in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173424.1 Differs from Rv3920c by 1aa, W110R in Mycobacterium bovis, Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico YP_005173425.1 Differs from Rv3921c and Mb3952c by 1aa, V184A in Mycobacterium bovis BCG Pasteur, BCG Tokyo and BCG Mexico