-- dump date 20120504_153250 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 943945000001 SEQ_END SEQ_END NC_014921.1 1118751 1118751 DR NC_014921.1; contig end 1118751..1118751 Mycoplasma fermentans M64 YP_004136390.1 CDS dnaA NC_014921.1 291 1703 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K02313; chromosomal replication initiator protein dnaa 291..1703 Mycoplasma fermentans M64 10113402 YP_004136391.1 CDS dnaN NC_014921.1 1834 2940 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K02338; DNA polymerase iii beta subunit 1834..2940 Mycoplasma fermentans M64 10112295 YP_004136392.1 CDS yaaA NC_014921.1 2942 3163 D Functional Classification (COG): Function unknown; s4-like RNA-binding protein 2942..3163 Mycoplasma fermentans M64 10112296 YP_004136393.1 CDS MfeM64YM_0004 NC_014921.1 3301 6099 R hypothetical protein complement(3301..6099) Mycoplasma fermentans M64 10112297 YP_004136394.1 CDS MfeM64YM_0005 NC_014921.1 6232 6363 R hypothetical protein complement(6232..6363) Mycoplasma fermentans M64 10112298 YP_004136395.1 CDS MfeM64YM_0006 NC_014921.1 6988 7200 R hypothetical protein complement(6988..7200) Mycoplasma fermentans M64 10112299 YP_004136396.1 CDS comEB NC_014921.1 7424 7915 R Functional Classification (COG): Nucleotide transport and metabolism; KEGG Orthology: K01493; deoxycytidylate deaminase protein complement(7424..7915) Mycoplasma fermentans M64 10112300 YP_004136397.1 CDS degV NC_014921.1 7999 8901 R Functional Classification (COG): Function unknown; degv-like protein complement(7999..8901) Mycoplasma fermentans M64 10112301 YP_004136398.1 CDS tyrS NC_014921.1 9575 10810 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01866; tyrosyl-tRNA synthetase 9575..10810 Mycoplasma fermentans M64 10112303 YP_004136399.1 CDS glpF NC_014921.1 10852 11631 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K02440; glycerol uptake facilitator protein complement(10852..11631) Mycoplasma fermentans M64 10112304 YP_004136400.1 CDS MfeM64YM_0012 NC_014921.1 11977 12246 R hypothetical protein complement(11977..12246) Mycoplasma fermentans M64 10112306 YP_004136401.1 CDS MfeM64YM_0013 NC_014921.1 12276 12368 R hypothetical protein complement(12276..12368) Mycoplasma fermentans M64 10112307 YP_004136402.1 CDS MfeM64YM_0014 NC_014921.1 12370 12519 R hypothetical protein complement(12370..12519) Mycoplasma fermentans M64 10112308 YP_004136403.1 CDS nadE NC_014921.1 12898 13692 D Functional Classification (COG): Coenzyme metabolism; KEGG Orthology: K01916; nh(3)-dependent nad(+) synthetase 12898..13692 Mycoplasma fermentans M64 10112309 YP_004136404.1 CDS MfeM64YM_0016 NC_014921.1 13715 14452 D Functional Classification (COG): Function unknown; PRK00110, PRK00110, hypothetical protein; Validated.; hypothetical protein 13715..14452 Mycoplasma fermentans M64 10112310 YP_004136405.1 CDS MfeM64YM_0017 NC_014921.1 14485 15525 D Functional Classification (COG): Inorganic ion transport and metabolism; COG0428, COG0428, divalent heavy-metal cations transporter [Inorganic ion transport and metabolism].; hypothetical protein 14485..15525 Mycoplasma fermentans M64 10112311 YP_004136406.1 CDS xfp NC_014921.1 15695 18073 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K01621; d-xylulose 5-phosphate/d-fructose 6-phosphate phosphoketolase complement(15695..18073) Mycoplasma fermentans M64 10112312 YP_004136407.1 CDS MfeM64YM_0019 NC_014921.1 18310 19752 R KEGG Orthology: K00558; cytosine-specific methyltransferase complement(18310..19752) Mycoplasma fermentans M64 10112313 YP_004136408.1 CDS MfeM64YM_0020 NC_014921.1 20275 21027 D cd06181, BI-1-like, BAX inhibitor (BI)-1 like protein family. Mammalian members of this family of small transmembrane proteins have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well characterized oncogene, or inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. Their broad tissue distribution and high degree of conservation suggests an important regulatory role. In plants, BI-1 like proteins play a role in pathogen resistance. A prokaryotic member, E.coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.; hypothetical protein 20275..21027 Mycoplasma fermentans M64 10112316 YP_004136409.1 CDS MfeM64YM_0021 NC_014921.1 21087 21821 R hypothetical protein complement(21087..21821) Mycoplasma fermentans M64 10112317 YP_004136410.1 CDS MfeM64YM_0022 NC_014921.1 22432 22710 D hypothetical protein 22432..22710 Mycoplasma fermentans M64 10112320 YP_004136411.1 CDS lysS NC_014921.1 22828 24294 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K04567; lysyl-tRNA synthetase 22828..24294 Mycoplasma fermentans M64 10112321 YP_004136412.1 CDS MfeM64YM_0024 NC_014921.1 24428 24535 D hypothetical protein 24428..24535 Mycoplasma fermentans M64 10112322 YP_004136413.1 CDS MfeM64YM_0025 NC_014921.1 24658 24819 D hypothetical protein 24658..24819 Mycoplasma fermentans M64 10112323 YP_004136414.1 CDS MfeM64YM_0026 NC_014921.1 24830 25048 D hypothetical protein 24830..25048 Mycoplasma fermentans M64 10112324 YP_004136415.1 CDS MfeM64YM_0027 NC_014921.1 25290 25424 D hypothetical protein 25290..25424 Mycoplasma fermentans M64 10112325 YP_004136416.1 CDS MfeM64YM_0028 NC_014921.1 25633 26694 D Functional Classification (COG): General function prediction only; KEGG Orthology: K07048; COG1735, Php, metal-dependent hydrolase with the TIM-barrel fold [General function prediction only].; hypothetical protein 25633..26694 Mycoplasma fermentans M64 10112326 YP_004136417.1 CDS sgaT NC_014921.1 26846 28984 D Functional Classification (COG): Function unknown; KEGG Orthology: K03475; transport protein sgat 26846..28984 Mycoplasma fermentans M64 10112327 YP_004136418.1 CDS sgaB NC_014921.1 29125 29361 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K02822; pentitol phosphotransferase enzyme ii, b component 29125..29361 Mycoplasma fermentans M64 10112328 YP_004136419.1 CDS sgaA NC_014921.1 29364 29849 D Functional Classification (COG): Carbohydrate transport and metabolism/Signal transduction mechanisms; KEGG Orthology: K02821; PTS system, iia component 29364..29849 Mycoplasma fermentans M64 10112329 YP_004136420.1 CDS sgaH NC_014921.1 29858 30511 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K03078; 3-hexulose-6-phosphate synthase 29858..30511 Mycoplasma fermentans M64 10112330 YP_004136421.1 CDS sgaU NC_014921.1 30492 31370 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K03079; hexulose-6-phosphate isomerase 30492..31370 Mycoplasma fermentans M64 10112331 YP_004136422.1 CDS sgaE NC_014921.1 31370 32101 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K03077; sugar isomerase sgae 31370..32101 Mycoplasma fermentans M64 10112332 YP_004136423.1 CDS MfeM64YM_0035 NC_014921.1 32076 32933 D Functional Classification (COG): General function prediction only; KEGG Orthology: K07024; pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.; hypothetical protein 32076..32933 Mycoplasma fermentans M64 10112333 YP_004136424.1 CDS MfeM64YM_0036 NC_014921.1 32926 33414 D hypothetical protein 32926..33414 Mycoplasma fermentans M64 10112334 YP_004136425.1 CDS MfeM64YM_0037 NC_014921.1 33483 33914 D hypothetical protein 33483..33914 Mycoplasma fermentans M64 10112335 YP_004136426.1 CDS MfeM64YM_0039 NC_014921.1 34937 35662 R hypothetical protein complement(34937..35662) Mycoplasma fermentans M64 10112337 YP_004136427.1 CDS ptsG-1 NC_014921.1 35755 38355 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K02777; PTS system, glucose-specific iiabc component complement(35755..38355) Mycoplasma fermentans M64 10112338 YP_004136428.1 CDS MfeM64YM_0041 NC_014921.1 38470 38679 R hypothetical protein complement(38470..38679) Mycoplasma fermentans M64 10112339 YP_004136429.1 CDS lplA NC_014921.1 39039 40022 D Functional Classification (COG): Coenzyme metabolism; KEGG Orthology: K03800; lipoate-protein ligase a 39039..40022 Mycoplasma fermentans M64 10112340 YP_004136430.1 CDS lip-1 NC_014921.1 40032 40913 D Functional Classification (COG): General function prediction only; triacylglycerol lipase 40032..40913 Mycoplasma fermentans M64 10112341 YP_004136431.1 CDS MfeM64YM_0044 NC_014921.1 41063 42070 D Functional Classification (COG): Cell envelope biogenesis, outer membrane; pfam00535, Glycos_transf_2, Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl-galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.; hypothetical protein 41063..42070 Mycoplasma fermentans M64 10112342 YP_004136432.1 CDS galE NC_014921.1 42083 43075 D Functional Classification (COG): Cell envelope biogenesis, outer membrane; KEGG Orthology: K01784; udp-glucose 4-epimerase 42083..43075 Mycoplasma fermentans M64 10112343 YP_004136433.1 CDS MfeM64YM_0046 NC_014921.1 43081 44040 D hypothetical protein 43081..44040 Mycoplasma fermentans M64 10112344 YP_004136434.1 CDS tnpA-2 NC_014921.1 44046 44402 D Functional Classification (COG): DNA replication, recombination, and repair; putative transposase 44046..44402 Mycoplasma fermentans M64 10112345 YP_004136435.1 CDS MfeM64YM_0048 NC_014921.1 44808 46094 D Functional Classification (COG): Cell envelope biogenesis, outer membrane; KEGG Orthology: K00786; cd06438, EpsO_like, EpsO protein participates in the methanolan synthesis. The Methylobacillus sp EpsO protein is to participate in the methanolan synthesis. Methanolan is an exopolysaccharide (EPS), composed of glucose, mannose and galactose. A 21 genes cluster was to participate in the methanolan synthesis. Gene disruption analysis revealed that EpsO is one of the glycosyltransferase enzymes involved in the synthesis of repeating sugar units onto the lipid carrier.; hypothetical protein 44808..46094 Mycoplasma fermentans M64 10112346 YP_004136436.1 CDS MfeM64YM_0049 NC_014921.1 46126 47148 D Functional Classification (COG): Function unknown; cd07187, YvcK_like, family of mostly uncharacterized proteins similar to B.subtilis YvcK. One member of this protein family, YvcK from Bacillus subtilis, has been proposed to play a role in carbon metabolism, since its function is essential for growth on intermediates of the Krebs cycle and the pentose phosphate pathway. In general, this family of mostly uncharacterized proteins is related to the CofD-like protein family. CofD has been characterized as a 2-phospho-L-lactate transferase involved in F420 biosynthesis. This family appears to have the same conserved phosphate binding site as the other family in this hierarchy, but a different substrate binding site.; hypothetical protein 46126..47148 Mycoplasma fermentans M64 10112347 YP_004136437.1 CDS glmU NC_014921.1 47161 47859 D Functional Classification (COG): Cell envelope biogenesis, outer membrane/Translation, ribosomal structure and biogenesis; bifunctional protein glmu 47161..47859 Mycoplasma fermentans M64 10112348 YP_004136438.1 CDS tnpA-3 NC_014921.1 48062 48775 R Functional Classification (COG): DNA replication, recombination, and repair; transposase complement(48062..48775) Mycoplasma fermentans M64 10112349 YP_004136439.1 CDS tnpA-4 NC_014921.1 48793 49161 R transposase complement(48793..49161) Mycoplasma fermentans M64 10112350 YP_004136440.1 CDS bcrA-1 NC_014921.1 49375 50076 D Functional Classification (COG): Defense mechanisms; KEGG Orthology: K01990; abc transporter ATP-binding protein 49375..50076 Mycoplasma fermentans M64 10112351 YP_004136441.1 CDS MfeM64YM_0054 NC_014921.1 50206 50442 R hypothetical protein complement(50206..50442) Mycoplasma fermentans M64 10112352 YP_004136442.1 CDS MfeM64YM_0055 NC_014921.1 50495 51766 D hypothetical protein 50495..51766 Mycoplasma fermentans M64 10112353 YP_004136443.1 CDS MfeM64YM_0056 NC_014921.1 51759 55127 D hypothetical protein 51759..55127 Mycoplasma fermentans M64 10112354 YP_004136444.1 CDS MfeM64YM_0057 NC_014921.1 55117 57426 D hypothetical protein 55117..57426 Mycoplasma fermentans M64 10112355 YP_004136445.1 CDS ftsY NC_014921.1 57513 58580 D Functional Classification (COG): Intracellular trafficking and secretion; KEGG Orthology: K03110; cell division protein ftsy 57513..58580 Mycoplasma fermentans M64 10112356 YP_004136446.1 CDS MfeM64YM_0059 NC_014921.1 58573 58803 D Functional Classification (COG): Function unknown; KEGG Orthology: K09787; PRK00118, PRK00118, putative DNA-binding protein; Validated.; hypothetical protein 58573..58803 Mycoplasma fermentans M64 10112357 YP_004136447.1 CDS MfeM64YM_0060 NC_014921.1 58852 60276 D Functional Classification (COG): General function prediction only; putative aaa+ superfamily atpase 58852..60276 Mycoplasma fermentans M64 10112358 YP_004136448.1 CDS MfeM64YM_0061 NC_014921.1 60328 61305 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02834; pfam02033, RBFA, Ribosome-binding factor A.; hypothetical protein complement(60328..61305) Mycoplasma fermentans M64 10112359 YP_004136449.1 CDS rpiR NC_014921.1 61316 62182 R Functional Classification (COG): Transcription; transcriptional regulator, rpir family complement(61316..62182) Mycoplasma fermentans M64 10112360 YP_004136450.1 CDS rpsP NC_014921.1 62422 62868 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02959; putative 30S ribosomal protein s16 62422..62868 Mycoplasma fermentans M64 10112361 YP_004136451.1 CDS trmD NC_014921.1 62882 63583 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K00554; tRNA (guanine-n(1)-)-methyltransferase 62882..63583 Mycoplasma fermentans M64 10112362 YP_004136452.1 CDS rplS NC_014921.1 63573 63929 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02884; 50S ribosomal protein l19 63573..63929 Mycoplasma fermentans M64 10112363 YP_004136453.1 CDS MfeM64YM_0066 NC_014921.1 64047 64487 R hypothetical protein complement(64047..64487) Mycoplasma fermentans M64 10112364 YP_004136454.1 CDS rlmH NC_014921.1 64522 64968 R Functional Classification (COG): Function unknown; KEGG Orthology: K00783; ribosomal RNA large subunit methyltransferase h complement(64522..64968) Mycoplasma fermentans M64 10112365 YP_004136455.1 CDS mnmG NC_014921.1 64961 66814 R Functional Classification (COG): Cell division and chromosome partitioning; KEGG Orthology: K03495; tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmg complement(64961..66814) Mycoplasma fermentans M64 10112366 YP_004136456.1 CDS mgpA-1 NC_014921.1 67137 68105 D Functional Classification (COG): General function prediction only; KEGG Orthology: K06881; mgpa-like protein 67137..68105 Mycoplasma fermentans M64 10112368 YP_004136457.1 CDS mgpA-2 NC_014921.1 68105 69100 D Functional Classification (COG): General function prediction only; KEGG Orthology: K06881; mgpa-like protein 68105..69100 Mycoplasma fermentans M64 10112369 YP_004136458.1 CDS MfeM64YM_0071 NC_014921.1 69225 69659 D Functional Classification (COG): Function unknown; PRK00092, PRK00092, hypothetical protein; Reviewed.; hypothetical protein 69225..69659 Mycoplasma fermentans M64 10112370 YP_004136459.1 CDS nusA NC_014921.1 69669 71285 D Functional Classification (COG): Transcription; KEGG Orthology: K02600; n-utilization substance protein a 69669..71285 Mycoplasma fermentans M64 10112371 YP_004136460.1 CDS MfeM64YM_0073 NC_014921.1 71266 71580 D Functional Classification (COG): Transcription; KEGG Orthology: K07742; pfam04296, DUF448, Protein of unknown function (DUF448).; hypothetical protein 71266..71580 Mycoplasma fermentans M64 10112372 YP_004136461.1 CDS infB NC_014921.1 71559 73364 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02519; translation initiation factor if-2 71559..73364 Mycoplasma fermentans M64 10112373 YP_004136462.1 CDS apt NC_014921.1 73394 73909 D Functional Classification (COG): Nucleotide transport and metabolism; KEGG Orthology: K00759; adenine phosphoribosyltransferase 73394..73909 Mycoplasma fermentans M64 10112374 YP_004136463.1 CDS MfeM64YM_0076 NC_014921.1 74139 74210 R hypothetical protein complement(74139..74210) Mycoplasma fermentans M64 10112375 YP_004136464.1 CDS tnpA-5 NC_014921.1 74188 75225 R Functional Classification (COG): DNA replication, recombination, and repair; transposase complement(74188..75225) Mycoplasma fermentans M64 10112376 YP_004136465.1 CDS dnaI NC_014921.1 75364 76257 R Functional Classification (COG): DNA replication, recombination, and repair; putative primosomal DNA helicase dnai complement(75364..76257) Mycoplasma fermentans M64 10112377 YP_004136466.1 CDS MfeM64YM_0079 NC_014921.1 76271 77233 R Functional Classification (COG): DNA replication, recombination, and repair; COG3611, DnaB, Replication initiation/membrane attachment protein [DNA replication, recombination, and repair].; hypothetical protein complement(76271..77233) Mycoplasma fermentans M64 10112378 YP_004136467.1 CDS coaE NC_014921.1 77283 77855 R Functional Classification (COG): Coenzyme metabolism; KEGG Orthology: K00859; dephospho-CoA kinase complement(77283..77855) Mycoplasma fermentans M64 10112379 YP_004136468.1 CDS MfeM64YM_0081 NC_014921.1 77857 78231 R Functional Classification (COG): Function unknown; pfam01205, UPF0029, Uncharacterized protein family UPF0029.; hypothetical protein complement(77857..78231) Mycoplasma fermentans M64 10112380 YP_004136469.1 CDS rpiB NC_014921.1 78298 78744 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K01808; ribose 5-phosphate isomerase b complement(78298..78744) Mycoplasma fermentans M64 10112381 YP_004136470.1 CDS sunT NC_014921.1 78877 80940 D Functional Classification (COG): Defense mechanisms; KEGG Orthology: K02021; unspecified toxin/drug abc transporter ATP-binding and permease protein 78877..80940 Mycoplasma fermentans M64 10112382 YP_004136471.1 CDS MfeM64YM_0084 NC_014921.1 80915 81301 D hypothetical protein 80915..81301 Mycoplasma fermentans M64 10112383 YP_004136472.1 CDS MfeM64YM_0085 NC_014921.1 81322 81777 D Functional Classification (COG): General function prediction only; KEGG Orthology: K07042; putative metalloprotease 81322..81777 Mycoplasma fermentans M64 10112384 YP_004136473.1 CDS cdd NC_014921.1 81781 82173 D Functional Classification (COG): Nucleotide transport and metabolism; KEGG Orthology: K01489; cytidine deaminase 81781..82173 Mycoplasma fermentans M64 10112385 YP_004136474.1 CDS era NC_014921.1 82173 83042 D Functional Classification (COG): General function prediction only; KEGG Orthology: K03595; gtp-binding protein era 82173..83042 Mycoplasma fermentans M64 10112386 YP_004136475.1 CDS pepP NC_014921.1 83075 84124 D Functional Classification (COG): Amino acid transport and metabolism; KEGG Orthology: K01262; xaa-pro aminopeptidase 83075..84124 Mycoplasma fermentans M64 10112387 YP_004136476.1 CDS trmA NC_014921.1 84198 85514 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K00599; tRNA (uracil-5-)-methyltransferase related enzyme 84198..85514 Mycoplasma fermentans M64 10112388 YP_004136477.1 CDS MfeM64YM_0090 NC_014921.1 85572 85706 D hypothetical protein 85572..85706 Mycoplasma fermentans M64 10112389 YP_004136478.1 CDS MfeM64YM_0091 NC_014921.1 85697 85885 D hypothetical protein 85697..85885 Mycoplasma fermentans M64 10112390 YP_004136479.1 CDS MfeM64YM_0092 NC_014921.1 85944 87041 D hypothetical protein 85944..87041 Mycoplasma fermentans M64 10112391 YP_004136480.1 CDS MfeM64YM_0093 NC_014921.1 87116 88279 D hypothetical protein 87116..88279 Mycoplasma fermentans M64 10112392 YP_004136481.1 CDS MfeM64YM_0094 NC_014921.1 88289 89077 D hypothetical protein 88289..89077 Mycoplasma fermentans M64 10112393 YP_004136482.1 CDS MfeM64YM_0096 NC_014921.1 90100 90978 D hypothetical protein 90100..90978 Mycoplasma fermentans M64 10112395 YP_004136483.1 CDS MfeM64YM_0097 NC_014921.1 91241 91516 D hypothetical protein 91241..91516 Mycoplasma fermentans M64 10112396 YP_004136484.1 CDS MfeM64YM_0098 NC_014921.1 91817 92683 D hypothetical protein 91817..92683 Mycoplasma fermentans M64 10112397 YP_004136485.1 CDS smf-1 NC_014921.1 92686 93180 D Functional Classification (COG): DNA replication, recombination, and repair/Intracellular trafficking and secretion; DNA processing protein smf 92686..93180 Mycoplasma fermentans M64 10112398 YP_004136486.1 CDS MfeM64YM_0100 NC_014921.1 93198 93656 D hypothetical protein 93198..93656 Mycoplasma fermentans M64 10112399 YP_004136487.1 CDS MfeM64YM_0101 NC_014921.1 93855 94079 D hypothetical protein 93855..94079 Mycoplasma fermentans M64 10112400 YP_004136488.1 CDS MfeM64YM_0102 NC_014921.1 94082 94552 D hypothetical protein 94082..94552 Mycoplasma fermentans M64 10112401 YP_004136489.1 CDS ruvA-1 NC_014921.1 94566 95003 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03550; holliday junction ATP-dependent DNA helicase ruva 94566..95003 Mycoplasma fermentans M64 10112402 YP_004136490.1 CDS MfeM64YM_0104 NC_014921.1 94985 95167 D hypothetical protein 94985..95167 Mycoplasma fermentans M64 10112403 YP_004136491.1 CDS ruvB-1 NC_014921.1 95186 95893 D Functional Classification (COG): DNA replication, recombination, and repair; holliday junction ATP-dependent DNA helicase ruvb 95186..95893 Mycoplasma fermentans M64 10112404 YP_004136492.1 CDS MfeM64YM_0106 NC_014921.1 95877 97067 D Functional Classification (COG): DNA replication, recombination, and repair; type ii r/m system DNA methylase 95877..97067 Mycoplasma fermentans M64 10112405 YP_004136493.1 CDS MfeM64YM_0107 NC_014921.1 97093 97560 D hypothetical protein 97093..97560 Mycoplasma fermentans M64 10112406 YP_004136494.1 CDS MfeM64YM_0108 NC_014921.1 97580 98479 D hypothetical protein 97580..98479 Mycoplasma fermentans M64 10112407 YP_004136495.1 CDS MfeM64YM_0109 NC_014921.1 98466 99056 D hypothetical protein 98466..99056 Mycoplasma fermentans M64 10112408 YP_004136496.1 CDS MfeM64YM_0110 NC_014921.1 99062 99505 D hypothetical protein 99062..99505 Mycoplasma fermentans M64 10112409 YP_004136497.1 CDS MfeM64YM_0111 NC_014921.1 99611 101131 D hypothetical protein 99611..101131 Mycoplasma fermentans M64 10112410 YP_004136498.1 CDS MfeM64YM_0112 NC_014921.1 101155 101532 D hypothetical protein 101155..101532 Mycoplasma fermentans M64 10112411 YP_004136499.1 CDS MfeM64YM_0113 NC_014921.1 101535 102917 D hypothetical protein 101535..102917 Mycoplasma fermentans M64 10112412 YP_004136500.1 CDS trsE-1 NC_014921.1 102920 105649 D Functional Classification (COG): Intracellular trafficking and secretion; trse-like protein 102920..105649 Mycoplasma fermentans M64 10112413 YP_004136501.1 CDS MfeM64YM_0115 NC_014921.1 105691 109344 D hypothetical protein 105691..109344 Mycoplasma fermentans M64 10112414 YP_004136502.1 CDS MfeM64YM_0116 NC_014921.1 109420 110640 D hypothetical protein 109420..110640 Mycoplasma fermentans M64 10112415 YP_004136503.1 CDS MfeM64YM_0118 NC_014921.1 111466 112014 R Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K00599; DNA methylase complement(111466..112014) Mycoplasma fermentans M64 10112417 YP_004136504.1 CDS def NC_014921.1 112085 112654 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01462; peptide deformylase 112085..112654 Mycoplasma fermentans M64 10112418 YP_004136505.1 CDS MfeM64YM_0120 NC_014921.1 112669 114114 D hypothetical protein 112669..114114 Mycoplasma fermentans M64 10112419 YP_004136506.1 CDS parE NC_014921.1 114265 116178 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K02622; topoisomerase iv subunit b 114265..116178 Mycoplasma fermentans M64 10112420 YP_004136507.1 CDS parC NC_014921.1 116191 118761 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K02621; topoisomerase iv subunit a 116191..118761 Mycoplasma fermentans M64 10112421 YP_004136508.1 CDS MfeM64YM_0123 NC_014921.1 118860 119384 D Functional Classification (COG): General function prediction only; KEGG Orthology: K07095; phosphoesterase 118860..119384 Mycoplasma fermentans M64 10112422 YP_004136509.1 CDS yitU NC_014921.1 119456 120388 D Functional Classification (COG): General function prediction only; KEGG Orthology: K07024; cof family had hydrolase protein 119456..120388 Mycoplasma fermentans M64 10112423 YP_004136510.1 CDS rnhB-1 NC_014921.1 120391 121140 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03471; ribonuclease 120391..121140 Mycoplasma fermentans M64 10112424 YP_004136511.1 CDS dnaK NC_014921.1 121410 123167 D Functional Classification (COG): Posttranslational modification, protein turnover, chaperones; KEGG Orthology: K04043; chaperone protein dnak 121410..123167 Mycoplasma fermentans M64 10112425 YP_004136512.1 CDS MfeM64YM_0127 NC_014921.1 123257 123328 R hypothetical protein complement(123257..123328) Mycoplasma fermentans M64 10112426 YP_004136513.1 CDS mgs1 NC_014921.1 123356 124570 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K07478; atpase, aaa family 123356..124570 Mycoplasma fermentans M64 10112427 YP_004136514.1 CDS pheS NC_014921.1 124572 125534 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01889; phenylalanyl-tRNA synthetase alpha chain 124572..125534 Mycoplasma fermentans M64 10112428 YP_004136515.1 CDS ung NC_014921.1 125524 126195 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03648; uracil-DNA glycosylase 125524..126195 Mycoplasma fermentans M64 10112429 YP_004136516.1 CDS pheT NC_014921.1 126197 128383 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01890; phenylalanyl-tRNA synthetase beta chain 126197..128383 Mycoplasma fermentans M64 10112430 YP_004136517.1 CDS glyA NC_014921.1 128392 129654 D Functional Classification (COG): Amino acid transport and metabolism; KEGG Orthology: K00600; serine hydroxymethyltransferase 128392..129654 Mycoplasma fermentans M64 10112431 YP_004136518.1 CDS MfeM64YM_0133 NC_014921.1 129710 131500 R Functional Classification (COG): Defense mechanisms; COG0534, NorM, Na+-driven multidrug efflux pump [Defense mechanisms].; hypothetical protein complement(129710..131500) Mycoplasma fermentans M64 10112432 YP_004136519.1 CDS dnaJ NC_014921.1 131924 133045 D Functional Classification (COG): Posttranslational modification, protein turnover, chaperones; KEGG Orthology: K03686; chaperone protein dnaj 131924..133045 Mycoplasma fermentans M64 10112434 YP_004136520.1 CDS MfeM64YM_0135 NC_014921.1 133082 133558 D hypothetical protein 133082..133558 Mycoplasma fermentans M64 10112435 YP_004136521.1 CDS acpS NC_014921.1 133677 133985 D Functional Classification (COG): Lipid metabolism; KEGG Orthology: K00997; holo-[acyl-carrier-protein] synthase 133677..133985 Mycoplasma fermentans M64 10112436 YP_004136522.1 CDS plsC NC_014921.1 133987 134733 D Functional Classification (COG): Lipid metabolism; KEGG Orthology: K00655; 1-acyl-sn-glycerol-3-phosphate acyltransferase 133987..134733 Mycoplasma fermentans M64 10112437 YP_004136523.1 CDS scpA NC_014921.1 134723 135481 D Functional Classification (COG): Function unknown; KEGG Orthology: K05896; segregation and condensation protein a 134723..135481 Mycoplasma fermentans M64 10112438 YP_004136524.1 CDS spcB NC_014921.1 135471 136055 D Functional Classification (COG): Transcription; KEGG Orthology: K06024; segregation and condensation protein b 135471..136055 Mycoplasma fermentans M64 10112439 YP_004136525.1 CDS rluC NC_014921.1 136109 136951 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K06179; ribosomal large subunit pseudouridine synthase c 136109..136951 Mycoplasma fermentans M64 10112440 YP_004136526.1 CDS gatC NC_014921.1 136960 137262 D KEGG Orthology: K02435; glutamyl-tRNA amidotransferase subunit c 136960..137262 Mycoplasma fermentans M64 10112441 YP_004136527.1 CDS gatA NC_014921.1 137262 138584 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02433; glutamyl-tRNA amidotransferase subunit a 137262..138584 Mycoplasma fermentans M64 10112442 YP_004136528.1 CDS gatB NC_014921.1 138577 139998 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02434; aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit b 138577..139998 Mycoplasma fermentans M64 10112443 YP_004136529.1 CDS MfeM64YM_0144 NC_014921.1 140128 140715 D abortive infection protein abigi 140128..140715 Mycoplasma fermentans M64 10112444 YP_004136530.1 CDS dpnII NC_014921.1 141671 142528 R KEGG Orthology: K01155; type ii restriction enzyme dpnii complement(141671..142528) Mycoplasma fermentans M64 10112446 YP_004136531.1 CDS dam NC_014921.1 142530 143669 R Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K06223; adenine-specific DNA methyltransferase complement(142530..143669) Mycoplasma fermentans M64 10112447 YP_004136532.1 CDS recG NC_014921.1 143651 145150 R Functional Classification (COG): Transcription; ATP-dependent DNA helicase complement(143651..145150) Mycoplasma fermentans M64 10112448 YP_004136533.1 CDS pepF NC_014921.1 145131 146957 D Functional Classification (COG): Amino acid transport and metabolism; KEGG Orthology: K08602; oligoendopeptidase f 145131..146957 Mycoplasma fermentans M64 10112449 YP_004136534.1 CDS MfeM64YM_0150 NC_014921.1 147264 147935 D hypothetical protein 147264..147935 Mycoplasma fermentans M64 10112450 YP_004136535.1 CDS tig-1 NC_014921.1 148089 149612 D Functional Classification (COG): Posttranslational modification, protein turnover, chaperones; KEGG Orthology: K03545; trigger factor 148089..149612 Mycoplasma fermentans M64 10112451 YP_004136536.1 CDS cspR NC_014921.1 149739 150272 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K03216; tRNA/rRNA methyltransferase 149739..150272 Mycoplasma fermentans M64 10112452 YP_004136537.1 CDS spoU-1 NC_014921.1 150257 150970 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K03437; rRNA methylase 150257..150970 Mycoplasma fermentans M64 10112453 YP_004136538.1 CDS MfeM64YM_0154 NC_014921.1 150982 151242 D hypothetical protein 150982..151242 Mycoplasma fermentans M64 10112454 YP_004136539.1 CDS MfeM64YM_0155 NC_014921.1 151235 152089 D Functional Classification (COG): General function prediction only; KEGG Orthology: K06948; gtp-binding protein 151235..152089 Mycoplasma fermentans M64 10112455 YP_004136540.1 CDS MfeM64YM_0156 NC_014921.1 152099 152530 D hypothetical protein 152099..152530 Mycoplasma fermentans M64 10112456 YP_004136541.1 CDS MfeM64YM_0157 NC_014921.1 152656 153351 D Functional Classification (COG): Defense mechanisms; KEGG Orthology: K01990; abc transporter related protein 152656..153351 Mycoplasma fermentans M64 10112457 YP_004136542.1 CDS MfeM64YM_0158 NC_014921.1 153358 153507 D Functional Classification (COG): Inorganic ion transport and metabolism; abc transporter ATP-binding protein 153358..153507 Mycoplasma fermentans M64 10112458 YP_004136543.1 CDS MfeM64YM_0159 NC_014921.1 153516 155162 D pfam01061, ABC2_membrane, ABC-2 type transporter.; hypothetical protein 153516..155162 Mycoplasma fermentans M64 10112459 YP_004136544.1 CDS MfeM64YM_0160 NC_014921.1 155255 155521 R hypothetical protein complement(155255..155521) Mycoplasma fermentans M64 10112460 YP_004136545.1 CDS MfeM64YM_0161 NC_014921.1 155534 155650 R hypothetical protein complement(155534..155650) Mycoplasma fermentans M64 10112461 YP_004136546.1 CDS deoD-1 NC_014921.1 155771 156478 D Functional Classification (COG): Nucleotide transport and metabolism; KEGG Orthology: K03784; purine-nucleoside phosphorylase 155771..156478 Mycoplasma fermentans M64 10112462 YP_004136547.1 CDS tpx NC_014921.1 156489 156998 D Functional Classification (COG): Posttranslational modification, protein turnover, chaperones; KEGG Orthology: K11065; thiol peroxidase 156489..156998 Mycoplasma fermentans M64 10112463 YP_004136548.1 CDS MfeM64YM_0164 NC_014921.1 157344 157694 D hypothetical protein 157344..157694 Mycoplasma fermentans M64 10112464 YP_004136549.1 CDS MfeM64YM_0165 NC_014921.1 157740 158789 R Functional Classification (COG): Function unknown; KEGG Orthology: K07058; ribonuclease bn-like family enzyme complement(157740..158789) Mycoplasma fermentans M64 10112465 YP_004136550.1 CDS engA NC_014921.1 158839 160146 R Functional Classification (COG): General function prediction only; KEGG Orthology: K03977; gtp-binding protein enga complement(158839..160146) Mycoplasma fermentans M64 10112466 YP_004136551.1 CDS cmk NC_014921.1 160150 160836 R Functional Classification (COG): Nucleotide transport and metabolism; KEGG Orthology: K00945; cytidylate kinase complement(160150..160836) Mycoplasma fermentans M64 10112467 YP_004136552.1 CDS MfeM64YM_0168 NC_014921.1 160925 162046 R hypothetical protein complement(160925..162046) Mycoplasma fermentans M64 10112468 YP_004136553.1 CDS rluB NC_014921.1 162025 162801 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K06178; pseudouridine synthase complement(162025..162801) Mycoplasma fermentans M64 10112469 YP_004136554.1 CDS nadD NC_014921.1 162789 163883 R Functional Classification (COG): Coenzyme metabolism; KEGG Orthology: K00969; bidomainal protein complement(162789..163883) Mycoplasma fermentans M64 10112470 YP_004136555.1 CDS mucB NC_014921.1 163909 165159 R Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K02346; DNA-damage repair protein mucb complement(163909..165159) Mycoplasma fermentans M64 10112471 YP_004136556.1 CDS nifU NC_014921.1 165149 165577 R Functional Classification (COG): Energy production and conversion; KEGG Orthology: K04488; nitrogen fixation protein nifu complement(165149..165577) Mycoplasma fermentans M64 10112472 YP_004136557.1 CDS nifS NC_014921.1 165567 166727 R Functional Classification (COG): Amino acid transport and metabolism; KEGG Orthology: K11717; nitrogen fixation protein nifs complement(165567..166727) Mycoplasma fermentans M64 10112473 YP_004136558.1 CDS MfeM64YM_0174 NC_014921.1 166895 168073 R Functional Classification (COG): Cell envelope biogenesis, outer membrane; putative glycosyltransferase complement(166895..168073) Mycoplasma fermentans M64 10112474 YP_004136559.1 CDS MfeM64YM_0175 NC_014921.1 168063 168827 R Functional Classification (COG): Cell envelope biogenesis, outer membrane; KEGG Orthology: K07271; lipopolysaccharide cholinephosphotransferase licd complement(168063..168827) Mycoplasma fermentans M64 10112475 YP_004136560.1 CDS ldhD NC_014921.1 168904 169893 R Functional Classification (COG): Energy production and conversion/Coenzyme metabolism/General function prediction only; KEGG Orthology: K03778; d-lactate dehydrogenase complement(168904..169893) Mycoplasma fermentans M64 10112476 YP_004136561.1 CDS MfeM64YM_0177 NC_014921.1 169902 171170 R Functional Classification (COG): General function prediction only; KEGG Orthology: K07088; transporter, auxin efflux carrier family complement(169902..171170) Mycoplasma fermentans M64 10112477 YP_004136562.1 CDS MfeM64YM_0178 NC_014921.1 171375 172460 R hypothetical protein complement(171375..172460) Mycoplasma fermentans M64 10112478 YP_004136563.1 CDS licCA NC_014921.1 172450 174069 R Functional Classification (COG): Cell envelope biogenesis, outer membrane; ctp:phosphocholine cytidylyltransferase/choline kinase complement(172450..174069) Mycoplasma fermentans M64 10112479 YP_004136564.1 CDS rplM NC_014921.1 174263 174697 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02871; 50S ribosomal protein L13 174263..174697 Mycoplasma fermentans M64 10112480 YP_004136565.1 CDS rpsI NC_014921.1 174699 175118 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02996; 30S ribosomal protein S9 174699..175118 Mycoplasma fermentans M64 10112481 YP_004136566.1 CDS MfeM64YM_0182 NC_014921.1 175427 176233 D Functional Classification (COG): Cell envelope biogenesis, outer membrane; KEGG Orthology: K07271; pfam04991, LicD, LICD Protein Family. The LICD family of proteins show high sequence similarity and are involved in phosphorylcholine metabolism. There is evidence to show that LicD2 mutants have a reduced ability to take up choline, have decreased ability to adhere to host cells and are less virulent.; hypothetical protein 175427..176233 Mycoplasma fermentans M64 10112483 YP_004136567.1 CDS MfeM64YM_0183 NC_014921.1 176710 177738 D hypothetical protein 176710..177738 Mycoplasma fermentans M64 10112486 YP_004136568.1 CDS MfeM64YM_0184 NC_014921.1 177791 177907 R hypothetical protein complement(177791..177907) Mycoplasma fermentans M64 10112487 YP_004136569.1 CDS MfeM64YM_0186 NC_014921.1 178898 179167 D pfam05066, RNA_pol_delta, DNA-directed RNA polymerase delta subunit. The delta protein is a dispensable subunit of Bacillus subtilis RNA polymerase (RNAP) that has major effects on the biochemical properties of the purified enzyme. In the presence of delta, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling. The delta protein, contains two distinct regions, an N-terminal domain and a glutamate and aspartate residue-rich carboxyl-terminal region.; hypothetical protein 178898..179167 Mycoplasma fermentans M64 10112489 YP_004136570.1 CDS fba NC_014921.1 179191 180054 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K01624; fructose-bisphosphate aldolase 179191..180054 Mycoplasma fermentans M64 10112490 YP_004136571.1 CDS MfeM64YM_0188 NC_014921.1 180137 180718 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K01174; putative nuclease 180137..180718 Mycoplasma fermentans M64 10112491 YP_004136572.1 CDS pyk NC_014921.1 180755 182188 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K00873; pyruvate kinase complement(180755..182188) Mycoplasma fermentans M64 10112492 YP_004136573.1 CDS MfeM64YM_0190 NC_014921.1 182372 183853 R hypothetical protein complement(182372..183853) Mycoplasma fermentans M64 10112493 YP_004136574.1 CDS engB NC_014921.1 183916 184500 R Functional Classification (COG): General function prediction only; KEGG Orthology: K03978; gtp-binding protein engb complement(183916..184500) Mycoplasma fermentans M64 10112494 YP_004136575.1 CDS coaD NC_014921.1 184500 184928 R Functional Classification (COG): Coenzyme metabolism; KEGG Orthology: K00954; phosphopantetheine adenylyltransferase complement(184500..184928) Mycoplasma fermentans M64 10112495 YP_004136576.1 CDS ackA NC_014921.1 184931 186124 R Functional Classification (COG): Energy production and conversion; KEGG Orthology: K00925; acetate kinase complement(184931..186124) Mycoplasma fermentans M64 10112496 YP_004136577.1 CDS pta NC_014921.1 186134 187087 R Functional Classification (COG): Energy production and conversion; KEGG Orthology: K00625; phosphate acetyltransferase complement(186134..187087) Mycoplasma fermentans M64 10112497 YP_004136578.1 CDS MfeM64YM_0195 NC_014921.1 187392 187490 D hypothetical protein 187392..187490 Mycoplasma fermentans M64 10112498 YP_004136579.1 CDS MfeM64YM_0196 NC_014921.1 187481 187576 D hypothetical protein 187481..187576 Mycoplasma fermentans M64 10112499 YP_004136580.1 CDS tnpA-7 NC_014921.1 187548 187802 D transposase 187548..187802 Mycoplasma fermentans M64 10112500 YP_004136581.1 CDS MfeM64YM_0198 NC_014921.1 187805 187960 D hypothetical protein 187805..187960 Mycoplasma fermentans M64 10112501 YP_004136582.1 CDS tnpA-8 NC_014921.1 188203 188445 D transposase 188203..188445 Mycoplasma fermentans M64 10112502 YP_004136583.1 CDS folD NC_014921.1 188534 189391 R Functional Classification (COG): Coenzyme metabolism; KEGG Orthology: K00288; bifunctional protein fold complement(188534..189391) Mycoplasma fermentans M64 10112503 YP_004136584.1 CDS valS NC_014921.1 189379 191877 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01873; valyl-tRNA synthetase complement(189379..191877) Mycoplasma fermentans M64 10112504 YP_004136585.1 CDS MfeM64YM_0202 NC_014921.1 192202 193119 R hypothetical protein complement(192202..193119) Mycoplasma fermentans M64 10112505 YP_004136586.1 CDS MfeM64YM_0203 NC_014921.1 193197 194177 D hypothetical protein 193197..194177 Mycoplasma fermentans M64 10112506 YP_004136587.1 CDS MfeM64YM_0204 NC_014921.1 194204 194668 R hypothetical protein complement(194204..194668) Mycoplasma fermentans M64 10112507 YP_004136588.1 CDS MfeM64YM_0205 NC_014921.1 194843 195004 R hypothetical protein complement(194843..195004) Mycoplasma fermentans M64 10112508 YP_004136589.1 CDS MfeM64YM_0206 NC_014921.1 195131 197608 R hypothetical protein complement(195131..197608) Mycoplasma fermentans M64 10112509 YP_004136590.1 CDS MfeM64YM_0207 NC_014921.1 197695 197847 D hypothetical protein 197695..197847 Mycoplasma fermentans M64 10112510 YP_004136591.1 CDS xseA NC_014921.1 198181 199557 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03601; exodeoxyribonuclease vii, large subunit 198181..199557 Mycoplasma fermentans M64 10112511 YP_004136592.1 CDS xseB NC_014921.1 199567 199755 D exodeoxyribonuclease vii, small subunit 199567..199755 Mycoplasma fermentans M64 10112512 YP_004136593.1 CDS MfeM64YM_0210 NC_014921.1 199930 203157 D Functional Classification (COG): DNA replication, recombination, and repair; ATP binding protein 199930..203157 Mycoplasma fermentans M64 10112513 YP_004136594.1 CDS MfeM64YM_0211 NC_014921.1 203320 203421 D hypothetical protein 203320..203421 Mycoplasma fermentans M64 10112514 YP_004136595.1 CDS MfeM64YM_0212 NC_014921.1 203501 206365 D TIGR02169, SMC_prok_A, SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N-and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent.; hypothetical protein 203501..206365 Mycoplasma fermentans M64 10112515 YP_004136596.1 CDS MfeM64YM_0213 NC_014921.1 206429 213430 D hypothetical protein 206429..213430 Mycoplasma fermentans M64 10112516 YP_004136597.1 CDS oppA NC_014921.1 213463 216270 D Functional Classification (COG): Amino acid transport and metabolism; KEGG Orthology: K02035; oligopeptide abc transporter, substrate-bindingprotein (oppa), lipoprotein 213463..216270 Mycoplasma fermentans M64 10112517 YP_004136598.1 CDS oppB-1 NC_014921.1 216283 217350 D Functional Classification (COG): Amino acid transport and metabolism/Inorganic ion transport and metabolism; KEGG Orthology: K02033; oligopeptide abc transporter, permease protein(oppb) 216283..217350 Mycoplasma fermentans M64 10112518 YP_004136599.1 CDS oppC-1 NC_014921.1 217363 218361 D Functional Classification (COG): Amino acid transport and metabolism/Inorganic ion transport and metabolism; KEGG Orthology: K02034; oligopeptide abc transporter, permease protein(oppc) 217363..218361 Mycoplasma fermentans M64 10112519 YP_004136600.1 CDS oppD-1 NC_014921.1 218363 219862 D Functional Classification (COG): Amino acid transport and metabolism/Inorganic ion transport and metabolism; KEGG Orthology: K02031; oligopeptide abc transporter, ATP-binding protein (oppd) 218363..219862 Mycoplasma fermentans M64 10112520 YP_004136601.1 CDS oppF-1 NC_014921.1 219855 221843 D Functional Classification (COG): Amino acid transport and metabolism/Inorganic ion transport and metabolism; KEGG Orthology: K02032; putative oligopeptide abc transporter, ATP-binding protein (oppf) 219855..221843 Mycoplasma fermentans M64 10112521 YP_004136602.1 CDS MfeM64YM_0219 NC_014921.1 221880 222284 R hypothetical protein complement(221880..222284) Mycoplasma fermentans M64 10112522 YP_004136603.1 CDS MfeM64YM_0220 NC_014921.1 222277 223617 R hypothetical protein complement(222277..223617) Mycoplasma fermentans M64 10112523 YP_004136604.1 CDS MfeM64YM_0221 NC_014921.1 223640 223984 R hypothetical protein complement(223640..223984) Mycoplasma fermentans M64 10112524 YP_004136605.1 CDS MfeM64YM_0222 NC_014921.1 223975 224070 R hypothetical protein complement(223975..224070) Mycoplasma fermentans M64 10112525 YP_004136606.1 CDS asnA NC_014921.1 224116 225096 R Functional Classification (COG): Amino acid transport and metabolism; KEGG Orthology: K01914; aspartate--ammonia ligase complement(224116..225096) Mycoplasma fermentans M64 10112526 YP_004136607.1 CDS MfeM64YM_0224 NC_014921.1 225083 225922 R Functional Classification (COG): Function unknown; COG4095, COG4095, Uncharacterized conserved protein [Function unknown]; hypothetical protein complement(225083..225922) Mycoplasma fermentans M64 10112527 YP_004136608.1 CDS MfeM64YM_0225 NC_014921.1 226163 226588 D cd06661, GGCT_like, GGCT-like domains, also called AIG2-like family. Gamma-glutamyl cyclotransferase (GGCT) catalyzes the formation of pyroglutamic acid (5-oxoproline) from dipeptides containing gamma-glutamyl, and is a dimeric protein. In Homo sapiens, the protein is encoded by the gene C7orf24, and the enzyme participates in the gamma-glutamyl cycle. Hereditary defects in the gamma-glutamyl cycle have been described for some of the genes involved, but not for C7orf24. The synthesis and metabolism of glutathione (L-gamma-glutamyl-L-cysteinylglycine) ties the gamma-glutamyl cycle to numerous cellular processes; glutathione acts as a ubiquitous reducing agent in reductive mechanisms involved in protein and DNA synthesis, transport processes, enzyme activity, and metabolism. AIG2 (avrRpt2-induced gene) is an Arabidopsis protein that exhibits RPS2-and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2. avrRpt2 is an avirulence gene that can convert virulent strains of P. syringae to avirulence on Arabidopsis thaliana, soybean, and bean. The family also includes bacterial tellurite-resistance proteins (trgB); tellurium (Te) compounds are used in industrial processes and had been used as antimicrobial agents in the past. Some members have been described proteins involved in cation transport (chaC).; hypothetical protein 226163..226588 Mycoplasma fermentans M64 10112528 YP_004136609.1 CDS MfeM64YM_0226 NC_014921.1 226626 226889 D hypothetical protein 226626..226889 Mycoplasma fermentans M64 10112529 YP_004136610.1 CDS MfeM64YM_0227 NC_014921.1 226984 227862 D hypothetical protein 226984..227862 Mycoplasma fermentans M64 10112530 YP_004136611.1 CDS MfeM64YM_0228 NC_014921.1 228125 228400 D hypothetical protein 228125..228400 Mycoplasma fermentans M64 10112531 YP_004136612.1 CDS MfeM64YM_0229 NC_014921.1 228701 229258 D hypothetical protein 228701..229258 Mycoplasma fermentans M64 10112532 YP_004136613.1 CDS smf-2 NC_014921.1 229570 230064 D Functional Classification (COG): DNA replication, recombination, and repair/Intracellular trafficking and secretion; DNA processing protein smf 229570..230064 Mycoplasma fermentans M64 10112533 YP_004136614.1 CDS MfeM64YM_0231 NC_014921.1 230081 230305 D hypothetical protein 230081..230305 Mycoplasma fermentans M64 10112534 YP_004136615.1 CDS MfeM64YM_0232 NC_014921.1 230308 230778 D hypothetical protein 230308..230778 Mycoplasma fermentans M64 10112535 YP_004136616.1 CDS ruvA-2 NC_014921.1 230792 231229 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03550; holliday junction ATP-dependent DNA helicase ruva 230792..231229 Mycoplasma fermentans M64 10112536 YP_004136617.1 CDS MfeM64YM_0234 NC_014921.1 231211 231393 D hypothetical protein 231211..231393 Mycoplasma fermentans M64 10112537 YP_004136618.1 CDS ruvB-2 NC_014921.1 231412 232119 D Functional Classification (COG): DNA replication, recombination, and repair; holliday junction ATP-dependent DNA helicase ruvb 231412..232119 Mycoplasma fermentans M64 10112538 YP_004136619.1 CDS MfeM64YM_0236 NC_014921.1 232103 233293 D Functional Classification (COG): DNA replication, recombination, and repair; type ii r/m system DNA methylase 232103..233293 Mycoplasma fermentans M64 10112539 YP_004136620.1 CDS MfeM64YM_0237 NC_014921.1 233319 233786 D hypothetical protein 233319..233786 Mycoplasma fermentans M64 10112540 YP_004136621.1 CDS MfeM64YM_0238 NC_014921.1 233806 234705 D hypothetical protein 233806..234705 Mycoplasma fermentans M64 10112541 YP_004136622.1 CDS MfeM64YM_0239 NC_014921.1 234692 235282 D hypothetical protein 234692..235282 Mycoplasma fermentans M64 10112542 YP_004136623.1 CDS MfeM64YM_0240 NC_014921.1 235288 235731 D hypothetical protein 235288..235731 Mycoplasma fermentans M64 10112543 YP_004136624.1 CDS MfeM64YM_0241 NC_014921.1 235837 237357 D hypothetical protein 235837..237357 Mycoplasma fermentans M64 10112544 YP_004136625.1 CDS MfeM64YM_0242 NC_014921.1 237381 237758 D hypothetical protein 237381..237758 Mycoplasma fermentans M64 10112545 YP_004136626.1 CDS MfeM64YM_0243 NC_014921.1 237761 239143 D hypothetical protein 237761..239143 Mycoplasma fermentans M64 10112546 YP_004136627.1 CDS MfeM64YM_0244 NC_014921.1 239146 239748 D putative membrane-bound atpase 239146..239748 Mycoplasma fermentans M64 10112547 YP_004136628.1 CDS trsE-2 NC_014921.1 239818 241875 D Functional Classification (COG): Intracellular trafficking and secretion; trse-like protein 239818..241875 Mycoplasma fermentans M64 10112548 YP_004136629.1 CDS MfeM64YM_0246 NC_014921.1 241917 245570 D hypothetical protein 241917..245570 Mycoplasma fermentans M64 10112549 YP_004136630.1 CDS MfeM64YM_0247 NC_014921.1 245646 246866 D hypothetical protein 245646..246866 Mycoplasma fermentans M64 10112550 YP_004136631.1 CDS MfeM64YM_0249 NC_014921.1 247767 248474 D Functional Classification (COG): Function unknown; COG3382, COG3382, Uncharacterized conserved protein [Function unknown].; hypothetical protein 247767..248474 Mycoplasma fermentans M64 10112552 YP_004136632.1 CDS abiGI NC_014921.1 248602 249189 D Functional Classification (COG): Transcription; abortive infection protein abigi 248602..249189 Mycoplasma fermentans M64 10112553 YP_004136633.1 CDS abiGII NC_014921.1 249182 250015 D abortive infection protein abigii 249182..250015 Mycoplasma fermentans M64 10112554 YP_004136634.1 CDS eno NC_014921.1 250064 251428 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K01689; enolase complement(250064..251428) Mycoplasma fermentans M64 10112555 YP_004136635.1 CDS manB-1 NC_014921.1 251663 254659 D Functional Classification (COG): Carbohydrate transport and metabolism; phosphoglucomutase/phosphomannomutase 251663..254659 Mycoplasma fermentans M64 10112556 YP_004136636.1 CDS tuf NC_014921.1 254968 256155 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02358; elongation factor tu 254968..256155 Mycoplasma fermentans M64 10112557 YP_004136637.1 CDS MfeM64YM_0255 NC_014921.1 256280 256681 D Functional Classification (COG): General function prediction only; KEGG Orthology: K06925; COG0802, COG0802, ATPase or kinase [General function prediction only].; hypothetical protein 256280..256681 Mycoplasma fermentans M64 10112558 YP_004136638.1 CDS MfeM64YM_0256 NC_014921.1 256681 257241 D Functional Classification (COG): Posttranslational modification, protein turnover, chaperones; COG1214, COG1214, Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones].; hypothetical protein 256681..257241 Mycoplasma fermentans M64 10112559 YP_004136639.1 CDS gcp NC_014921.1 257241 258173 D Functional Classification (COG): Posttranslational modification, protein turnover, chaperones; KEGG Orthology: K01409; o-sialoglycoprotein endopeptidase 257241..258173 Mycoplasma fermentans M64 10112560 YP_004136640.1 CDS MfeM64YM_0258 NC_014921.1 258164 258250 D hypothetical protein 258164..258250 Mycoplasma fermentans M64 10112561 YP_004136641.1 CDS MfeM64YM_0259 NC_014921.1 258442 263961 R hypothetical protein complement(258442..263961) Mycoplasma fermentans M64 10112562 YP_004136642.1 CDS MfeM64YM_0260 NC_014921.1 264019 264168 R hypothetical protein complement(264019..264168) Mycoplasma fermentans M64 10112563 YP_004136643.1 CDS MfeM64YM_0261 NC_014921.1 264313 264555 D Functional Classification (COG): Function unknown; seryl-tRNA synthetase family protein 264313..264555 Mycoplasma fermentans M64 10112564 YP_004136644.1 CDS MfeM64YM_0262 NC_014921.1 264558 265355 D Functional Classification (COG): General function prediction only; KEGG Orthology: K06976; acetyltransferase 264558..265355 Mycoplasma fermentans M64 10112565 YP_004136645.1 CDS ffh NC_014921.1 265369 266730 D Functional Classification (COG): Intracellular trafficking and secretion; KEGG Orthology: K03106; signal recognition particle protein 265369..266730 Mycoplasma fermentans M64 10112566 YP_004136646.1 CDS MfeM64YM_0264 NC_014921.1 266730 267767 D Functional Classification (COG): Function unknown; hypothetical protein 266730..267767 Mycoplasma fermentans M64 10112567 YP_004136647.1 CDS MfeM64YM_0265 NC_014921.1 267918 268364 D hypothetical protein 267918..268364 Mycoplasma fermentans M64 10112568 YP_004136648.1 CDS atpB NC_014921.1 268378 269172 D Functional Classification (COG): Energy production and conversion; KEGG Orthology: K02108; ATP synthase subunit a 268378..269172 Mycoplasma fermentans M64 10112569 YP_004136649.1 CDS atpE NC_014921.1 269192 269428 D Functional Classification (COG): Energy production and conversion; KEGG Orthology: K02110; ATP synthase subunit c 269192..269428 Mycoplasma fermentans M64 10112570 YP_004136650.1 CDS atpF NC_014921.1 269412 269960 D Functional Classification (COG): Energy production and conversion; KEGG Orthology: K02109; ATP synthase subunit b 269412..269960 Mycoplasma fermentans M64 10112571 YP_004136651.1 CDS atpH NC_014921.1 270002 270559 D Functional Classification (COG): Energy production and conversion; KEGG Orthology: K02113; ATP synthase subunit delta 270002..270559 Mycoplasma fermentans M64 10112572 YP_004136652.1 CDS atpA NC_014921.1 270552 272138 D Functional Classification (COG): Energy production and conversion; KEGG Orthology: K02111; ATP synthase subunit alpha 270552..272138 Mycoplasma fermentans M64 10112573 YP_004136653.1 CDS atpG NC_014921.1 272138 273010 D Functional Classification (COG): Energy production and conversion; KEGG Orthology: K02115; ATP synthase gamma chain 272138..273010 Mycoplasma fermentans M64 10112574 YP_004136654.1 CDS atpD NC_014921.1 273020 274528 D Functional Classification (COG): Energy production and conversion; KEGG Orthology: K02112; ATP synthase subunit beta 273020..274528 Mycoplasma fermentans M64 10112575 YP_004136655.1 CDS atpC NC_014921.1 274572 274997 D Functional Classification (COG): Energy production and conversion; KEGG Orthology: K02114; ATP synthase epsilon chain 274572..274997 Mycoplasma fermentans M64 10112576 YP_004136656.1 CDS MfeM64YM_0274 NC_014921.1 275835 276224 D hypothetical protein 275835..276224 Mycoplasma fermentans M64 10112578 YP_004136657.1 CDS MfeM64YM_0275 NC_014921.1 276339 276626 R pfam01713, Smr, Smr domain. This family includes the Smr (Small MutS Related) proteins, and the C-terminal region of the MutS2 protein. It has been suggested that this domain interacts with the MutS1 protein in the case of Smr proteins and with the N-terminal MutS related region of MutS2.; hypothetical protein complement(276339..276626) Mycoplasma fermentans M64 10112579 YP_004136658.1 CDS MfeM64YM_0276 NC_014921.1 277010 277261 D hypothetical protein 277010..277261 Mycoplasma fermentans M64 10112580 YP_004136659.1 CDS ptsG-2 NC_014921.1 278455 279339 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K02755; PTS system, glucose-specific iiabc component complement(278455..279339) Mycoplasma fermentans M64 10112583 YP_004136660.1 CDS MfeM64YM_0279 NC_014921.1 279581 280618 D Functional Classification (COG): Energy production and conversion/Coenzyme metabolism/General function prediction only; KEGG Orthology: K03778; d-isomer specific 2-hydroxyacid dehydrogenase family protein 279581..280618 Mycoplasma fermentans M64 10112584 YP_004136661.1 CDS MfeM64YM_0280 NC_014921.1 280707 281690 D hypothetical protein 280707..281690 Mycoplasma fermentans M64 10112585 YP_004136662.1 CDS MfeM64YM_0281 NC_014921.1 282323 285112 D hypothetical protein 282323..285112 Mycoplasma fermentans M64 10112586 YP_004136663.1 CDS oppB-2 NC_014921.1 285139 286215 D Functional Classification (COG): Amino acid transport and metabolism/Inorganic ion transport and metabolism; KEGG Orthology: K02033; oligopeptide abc transporter permease protein 285139..286215 Mycoplasma fermentans M64 10112587 YP_004136664.1 CDS oppC-2 NC_014921.1 286219 287430 D Functional Classification (COG): Amino acid transport and metabolism/Inorganic ion transport and metabolism; KEGG Orthology: K02034; oligopeptide abc transporter permease protein 286219..287430 Mycoplasma fermentans M64 10112588 YP_004136665.1 CDS oppD-2 NC_014921.1 287435 288550 D Functional Classification (COG): Amino acid transport and metabolism/Inorganic ion transport and metabolism; KEGG Orthology: K02031; oligopeptide abc transporter ATP-binding protein 287435..288550 Mycoplasma fermentans M64 10112589 YP_004136666.1 CDS oppF-2 NC_014921.1 288543 291194 D Functional Classification (COG): Amino acid transport and metabolism; KEGG Orthology: K02032; oligopeptide abc transporter ATP-binding protein 288543..291194 Mycoplasma fermentans M64 10112590 YP_004136667.1 CDS MfeM64YM_0286 NC_014921.1 291217 291693 D hypothetical protein 291217..291693 Mycoplasma fermentans M64 10112591 YP_004136668.1 CDS pepA-1 NC_014921.1 291785 293149 D Functional Classification (COG): Amino acid transport and metabolism; KEGG Orthology: K01255; leucyl aminopeptidase 291785..293149 Mycoplasma fermentans M64 10112592 YP_004136669.1 CDS MfeM64YM_0288 NC_014921.1 293359 294609 D Functional Classification (COG): General function prediction only; KEGG Orthology: K07133; aaa+ superfamily atpase 293359..294609 Mycoplasma fermentans M64 10112593 YP_004136670.1 CDS MfeM64YM_0289 NC_014921.1 294672 294806 R hypothetical protein complement(294672..294806) Mycoplasma fermentans M64 10112594 YP_004136671.1 CDS MfeM64YM_0290 NC_014921.1 294847 295527 R hypothetical protein complement(294847..295527) Mycoplasma fermentans M64 10112595 YP_004136672.1 CDS prrB NC_014921.1 295848 297041 D KEGG Orthology: K01154; anti-codon nuclease masking agent (prrb) 295848..297041 Mycoplasma fermentans M64 10112596 YP_004136673.1 CDS bspA NC_014921.1 297284 299077 D surface antigen bspa-like protein 297284..299077 Mycoplasma fermentans M64 10112597 YP_004136674.1 CDS gpmI NC_014921.1 299215 300714 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K01834; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 299215..300714 Mycoplasma fermentans M64 10112598 YP_004136675.1 CDS MfeM64YM_0294 NC_014921.1 300847 301734 D Functional Classification (COG): General function prediction only; pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.; hypothetical protein 300847..301734 Mycoplasma fermentans M64 10112599 YP_004136676.1 CDS MfeM64YM_0295 NC_014921.1 301902 302927 D PRK03427, PRK03427, cell division protein ZipA; Provisional.; hypothetical protein 301902..302927 Mycoplasma fermentans M64 10112600 YP_004136677.1 CDS secA NC_014921.1 303091 305613 D Functional Classification (COG): Intracellular trafficking and secretion; KEGG Orthology: K03070; protein translocase subunit seca 303091..305613 Mycoplasma fermentans M64 10112601 YP_004136678.1 CDS MfeM64YM_0297 NC_014921.1 305780 306982 D Functional Classification (COG): Function unknown; COG1284, COG1284, Uncharacterized conserved protein [Function unknown].; hypothetical protein 305780..306982 Mycoplasma fermentans M64 10112602 YP_004136679.1 CDS MfeM64YM_0298 NC_014921.1 307044 308279 D Functional Classification (COG): Function unknown; COG1284, COG1284, Uncharacterized conserved protein [Function unknown].; hypothetical protein 307044..308279 Mycoplasma fermentans M64 10112603 YP_004136680.1 CDS MfeM64YM_0299 NC_014921.1 308315 308542 R hypothetical protein complement(308315..308542) Mycoplasma fermentans M64 10112604 YP_004136681.1 CDS MfeM64YM_0300 NC_014921.1 308700 311375 R hypothetical protein complement(308700..311375) Mycoplasma fermentans M64 10112605 YP_004136682.1 CDS MfeM64YM_0301 NC_014921.1 311660 313156 D hypothetical protein 311660..313156 Mycoplasma fermentans M64 10112606 YP_004136683.1 CDS uvrB NC_014921.1 313312 315321 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03702; uvrabc system protein b 313312..315321 Mycoplasma fermentans M64 10112607 YP_004136684.1 CDS MfeM64YM_0303 NC_014921.1 315324 315830 D hypothetical protein 315324..315830 Mycoplasma fermentans M64 10112608 YP_004136685.1 CDS uvrA NC_014921.1 315846 318668 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03701; excinuclease abc subunit a 315846..318668 Mycoplasma fermentans M64 10112609 YP_004136686.1 CDS rpoB NC_014921.1 318975 322592 D Functional Classification (COG): Transcription; KEGG Orthology: K03043; DNA-directed RNA polymerase subunit beta 318975..322592 Mycoplasma fermentans M64 10112610 YP_004136687.1 CDS rpoC NC_014921.1 322585 327060 D Functional Classification (COG): Transcription; KEGG Orthology: K03046; DNA-directed RNA polymerase subunit beta 322585..327060 Mycoplasma fermentans M64 10112611 YP_004136688.1 CDS MfeM64YM_0307 NC_014921.1 327727 333093 D cd01823, SEST_like, SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.; hypothetical protein 327727..333093 Mycoplasma fermentans M64 10112612 YP_004136689.1 CDS MfeM64YM_0308 NC_014921.1 333112 334197 D Functional Classification (COG): Carbohydrate transport and metabolism; endo-1,4-beta-glucanase 333112..334197 Mycoplasma fermentans M64 10112613 YP_004136690.1 CDS MfeM64YM_0309 NC_014921.1 334264 334500 D Functional Classification (COG): Function unknown; KEGG Orthology: K09976; PRK00523, PRK00523, hypothetical protein; Provisional.; hypothetical protein 334264..334500 Mycoplasma fermentans M64 10112614 YP_004136691.1 CDS topA NC_014921.1 334559 336439 R Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03168; DNA topoisomerase complement(334559..336439) Mycoplasma fermentans M64 10112615 YP_004136692.1 CDS rpsF NC_014921.1 336803 337276 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02990; putative 30S ribosomal protein s6 336803..337276 Mycoplasma fermentans M64 10112616 YP_004136693.1 CDS ssb NC_014921.1 337304 337843 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03111; single-stranded DNA-binding protein 337304..337843 Mycoplasma fermentans M64 10112617 YP_004136694.1 CDS rpsR NC_014921.1 337855 338109 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02963; 30S ribosomal protein s18 337855..338109 Mycoplasma fermentans M64 10112618 YP_004136695.1 CDS sua5 NC_014921.1 338202 338657 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; translation factor sua5 protein 338202..338657 Mycoplasma fermentans M64 10112619 YP_004136696.1 CDS tig-2 NC_014921.1 338682 339902 R Functional Classification (COG): Posttranslational modification, protein turnover, chaperones; trigger factor complement(338682..339902) Mycoplasma fermentans M64 10112620 YP_004136697.1 CDS MfeM64YM_0316 NC_014921.1 339930 341543 R Functional Classification (COG): General function prediction only; abc transporter ATP-binding protein complement(339930..341543) Mycoplasma fermentans M64 10112621 YP_004136698.1 CDS MfeM64YM_0317 NC_014921.1 341626 342858 R hypothetical protein complement(341626..342858) Mycoplasma fermentans M64 10112622 YP_004136699.1 CDS ruvA-3 NC_014921.1 344090 344692 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03550; holliday junction ATP-dependent DNA helicase ruva 344090..344692 Mycoplasma fermentans M64 10112628 YP_004136700.1 CDS ruvB-3 NC_014921.1 344673 345635 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03551; holliday junction ATP-dependent DNA helicase ruvb 344673..345635 Mycoplasma fermentans M64 10112629 YP_004136701.1 CDS secD NC_014921.1 345694 348297 D Functional Classification (COG): Intracellular trafficking and secretion; KEGG Orthology: K12257; protein-export membrane protein 345694..348297 Mycoplasma fermentans M64 10112630 YP_004136702.1 CDS truB NC_014921.1 348402 349253 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K03177; tRNA pseudouridine synthase b 348402..349253 Mycoplasma fermentans M64 10112631 YP_004136703.1 CDS MfeM64YM_0322 NC_014921.1 349256 350098 D Functional Classification (COG): General function prediction only; KEGG Orthology: K07024; COG0561, Cof, hydrolases of the HAD superfamily [General function prediction only].; hypothetical protein 349256..350098 Mycoplasma fermentans M64 10112632 YP_004136704.1 CDS ribF NC_014921.1 350118 350990 D Functional Classification (COG): Coenzyme metabolism; KEGG Orthology: K11753; riboflavin biosynthesis protein 350118..350990 Mycoplasma fermentans M64 10112633 YP_004136705.1 CDS MfeM64YM_0324 NC_014921.1 351100 352080 D Functional Classification (COG): General function prediction only; PRK13671, PRK13671, hypothetical protein; Provisional.; hypothetical protein 351100..352080 Mycoplasma fermentans M64 10112634 YP_004136706.1 CDS oppF-3 NC_014921.1 352166 354709 D Functional Classification (COG): Amino acid transport and metabolism; KEGG Orthology: K02032; oligopeptide abc transporter ATP-binding protein 352166..354709 Mycoplasma fermentans M64 10112635 YP_004136707.1 CDS MfeM64YM_0326 NC_014921.1 354709 354774 D hypothetical protein 354709..354774 Mycoplasma fermentans M64 10112636 YP_004136708.1 CDS MfeM64YM_0327 NC_014921.1 354946 355161 R hypothetical protein complement(354946..355161) Mycoplasma fermentans M64 10112637 YP_004136709.1 CDS MfeM64YM_0328 NC_014921.1 355258 355998 D hypothetical protein 355258..355998 Mycoplasma fermentans M64 10112638 YP_004136710.1 CDS carB NC_014921.1 356002 356424 R putative carbamoyl-phosphate synthase large subunit complement(356002..356424) Mycoplasma fermentans M64 10112639 YP_004136711.1 CDS MfeM64YM_0330 NC_014921.1 356733 358928 D putative lipoprotein 356733..358928 Mycoplasma fermentans M64 10112640 YP_004136712.1 CDS MfeM64YM_0331 NC_014921.1 359017 360195 D Functional Classification (COG): DNA replication, recombination, and repair; COG1525, COG1525, Micrococcal nuclease (thermonuclease) homologs [DNA replication, recombination, and repair].; hypothetical protein 359017..360195 Mycoplasma fermentans M64 10112641 YP_004136713.1 CDS MfeM64YM_0332 NC_014921.1 360239 362335 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K02023; abc transporter ATP-binding protein 360239..362335 Mycoplasma fermentans M64 10112642 YP_004136714.1 CDS ugpA NC_014921.1 362319 363422 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K02025; abc transporter, permease protein 362319..363422 Mycoplasma fermentans M64 10112643 YP_004136715.1 CDS ugpE NC_014921.1 363442 364320 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K02026; abc transporter permease protein 363442..364320 Mycoplasma fermentans M64 10112644 YP_004136716.1 CDS MfeM64YM_0335 NC_014921.1 364332 364610 D hypothetical protein 364332..364610 Mycoplasma fermentans M64 10112645 YP_004136717.1 CDS MfeM64YM_0336 NC_014921.1 364619 366115 D hypothetical protein 364619..366115 Mycoplasma fermentans M64 10112646 YP_004136718.1 CDS rmuC NC_014921.1 366196 367503 R Functional Classification (COG): Function unknown; KEGG Orthology: K09760; rmuc domain protein complement(366196..367503) Mycoplasma fermentans M64 10112647 YP_004136719.1 CDS MfeM64YM_0338 NC_014921.1 367683 368207 D Functional Classification (COG): General function prediction only; gcn5-related n-acetyltransferase 367683..368207 Mycoplasma fermentans M64 10112648 YP_004136720.1 CDS MfeM64YM_0339 NC_014921.1 368251 368790 D Functional Classification (COG): General function prediction only; KEGG Orthology: K03152; cd03135, GATase1_DJ-1, Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1. DJ-1 is involved in multiple physiological processes including cancer, Parkinsons disease and male fertility. It is unclear how DJ-1 functions in these. DJ-1 has been shown to possess chaperone activity. DJ-1 is preferentially expressed in the testis and moderately in other tissues; it is induced together with genes involved in oxidative stress response. The Drosophila homologue (DJ-1A) plays an essential role in oxidative stress response and neuronal maintenance. Inhibition of DJ-1A function through RNAi, results in the cellular accumulation of reactive oxygen species, organismal hypersensitivity to oxidative stress, and dysfunction and degeneration of dopaminergic and photoreceptor neurons. DJ-1 has lacks enzymatic activity and the catalytic triad of typical GATase1 domains, however it does contain the highly conserved cysteine located at the nucelophile elbow region typical of these domains. This cysteine been proposed to be a site of regulation of DJ-1 activity by oxidation. DJ-1 is a dimeric enzyme.; hypothetical protein 368251..368790 Mycoplasma fermentans M64 10112649 YP_004136721.1 CDS MfeM64YM_0340 NC_014921.1 368832 370361 R hypothetical protein complement(368832..370361) Mycoplasma fermentans M64 10112650 YP_004136722.1 CDS gyrA NC_014921.1 370396 373176 R Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K02469; DNA gyrase subunit a complement(370396..373176) Mycoplasma fermentans M64 10112651 YP_004136723.1 CDS MfeM64YM_0342 NC_014921.1 373453 374352 D hypothetical protein 373453..374352 Mycoplasma fermentans M64 10112652 YP_004136724.1 CDS rpsD NC_014921.1 374545 375141 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02986; 30S ribosomal protein S4 374545..375141 Mycoplasma fermentans M64 10112653 YP_004136725.1 CDS rpmE NC_014921.1 375161 375400 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02909; 50S ribosomal protein l31 375161..375400 Mycoplasma fermentans M64 10112654 YP_004136726.1 CDS hrcA NC_014921.1 375587 376609 D Functional Classification (COG): Transcription; KEGG Orthology: K03705; heat-inducible transcription repressor hrca 375587..376609 Mycoplasma fermentans M64 10112655 YP_004136727.1 CDS MfeM64YM_0346 NC_014921.1 376609 377862 D Functional Classification (COG): Posttranslational modification, protein turnover, chaperones; KEGG Orthology: K03687; pfam01025, GrpE, GrpE.; hypothetical protein 376609..377862 Mycoplasma fermentans M64 10112656 YP_004136728.1 CDS mscL NC_014921.1 378031 378450 D Functional Classification (COG): Cell envelope biogenesis, outer membrane; KEGG Orthology: K03282; large-conductance mechanosensitive channel 378031..378450 Mycoplasma fermentans M64 10112657 YP_004136729.1 CDS MfeM64YM_0349 NC_014921.1 379442 379684 D hypothetical protein 379442..379684 Mycoplasma fermentans M64 10112659 YP_004136730.1 CDS MfeM64YM_0350 NC_014921.1 379659 379763 D hypothetical protein 379659..379763 Mycoplasma fermentans M64 10112660 YP_004136731.1 CDS infC NC_014921.1 379961 380581 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02520; translation initiation factor if-3 379961..380581 Mycoplasma fermentans M64 10112661 YP_004136732.1 CDS rpmI NC_014921.1 380583 380771 D KEGG Orthology: K02916; 50S ribosomal protein l35 380583..380771 Mycoplasma fermentans M64 10112662 YP_004136733.1 CDS rplT NC_014921.1 380816 381166 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02887; 50S ribosomal protein l20 380816..381166 Mycoplasma fermentans M64 10112663 YP_004136734.1 CDS MfeM64YM_0354 NC_014921.1 381156 381461 D hypothetical protein 381156..381461 Mycoplasma fermentans M64 10112664 YP_004136735.1 CDS MfeM64YM_0355 NC_014921.1 381743 382843 D Functional Classification (COG): DNA replication, recombination, and repair; transposase, mutator type 381743..382843 Mycoplasma fermentans M64 10112665 YP_004136736.1 CDS MfeM64YM_0356 NC_014921.1 382791 382967 D transposase, mutator type 382791..382967 Mycoplasma fermentans M64 10112666 YP_004136737.1 CDS MfeM64YM_0357 NC_014921.1 383156 385576 R Functional Classification (COG): Cell division and chromosome partitioning; COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].; hypothetical protein complement(383156..385576) Mycoplasma fermentans M64 10112667 YP_004136738.1 CDS MfeM64YM_0358 NC_014921.1 385652 386971 R hypothetical protein complement(385652..386971) Mycoplasma fermentans M64 10112668 YP_004136739.1 CDS int-1 NC_014921.1 387077 388075 D int 387077..388075 Mycoplasma fermentans M64 10112669 YP_004136740.1 CDS MfeM64YM_0360 NC_014921.1 388374 392210 D hypothetical protein 388374..392210 Mycoplasma fermentans M64 10112670 YP_004136741.1 CDS MfeM64YM_0361 NC_014921.1 392488 392649 D hypothetical protein 392488..392649 Mycoplasma fermentans M64 10112671 YP_004136742.1 CDS MfeM64YM_0362 NC_014921.1 392698 395838 R hypothetical protein complement(392698..395838) Mycoplasma fermentans M64 10112672 YP_004136743.1 CDS MfeM64YM_0363 NC_014921.1 396076 397638 R Functional Classification (COG): Cell division and chromosome partitioning; COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning].; hypothetical protein complement(396076..397638) Mycoplasma fermentans M64 10112673 YP_004136744.1 CDS MfeM64YM_0364 NC_014921.1 397771 402363 R KEGG Orthology: K11498; hypothetical protein complement(397771..402363) Mycoplasma fermentans M64 10112674 YP_004136745.1 CDS MfeM64YM_0365 NC_014921.1 402628 402960 R hypothetical protein complement(402628..402960) Mycoplasma fermentans M64 10112675 YP_004136746.1 CDS MfeM64YM_0366 NC_014921.1 403282 403374 R hypothetical protein complement(403282..403374) Mycoplasma fermentans M64 10112676 YP_004136747.1 CDS MfeM64YM_0367 NC_014921.1 403424 403654 R hypothetical protein complement(403424..403654) Mycoplasma fermentans M64 10112677 YP_004136748.1 CDS MfeM64YM_0369 NC_014921.1 404932 405363 R hypothetical protein complement(404932..405363) Mycoplasma fermentans M64 10112679 YP_004136749.1 CDS MfeM64YM_0370 NC_014921.1 405764 406930 R hypothetical protein complement(405764..406930) Mycoplasma fermentans M64 10112680 YP_004136750.1 CDS MfeM64YM_0371 NC_014921.1 406978 407904 R hypothetical protein complement(406978..407904) Mycoplasma fermentans M64 10112681 YP_004136751.1 CDS MfeM64YM_0372 NC_014921.1 408137 408616 R hypothetical protein complement(408137..408616) Mycoplasma fermentans M64 10112682 YP_004136752.1 CDS exiS-1 NC_014921.1 408902 409090 D exis 408902..409090 Mycoplasma fermentans M64 10112683 YP_004136753.1 CDS MfeM64YM_0374 NC_014921.1 409068 409655 R hypothetical protein complement(409068..409655) Mycoplasma fermentans M64 10112684 YP_004136754.1 CDS MfeM64YM_0375 NC_014921.1 409988 413332 R hypothetical protein complement(409988..413332) Mycoplasma fermentans M64 10112685 YP_004136755.1 CDS MfeM64YM_0376 NC_014921.1 413378 414064 R hypothetical protein complement(413378..414064) Mycoplasma fermentans M64 10112686 YP_004136756.1 CDS trsE-3 NC_014921.1 414045 416858 R Functional Classification (COG): Intracellular trafficking and secretion; trse-like protein complement(414045..416858) Mycoplasma fermentans M64 10112687 YP_004136757.1 CDS MfeM64YM_0378 NC_014921.1 416874 418064 R hypothetical protein complement(416874..418064) Mycoplasma fermentans M64 10112688 YP_004136758.1 CDS MfeM64YM_0379 NC_014921.1 418064 418345 R hypothetical protein complement(418064..418345) Mycoplasma fermentans M64 10112689 YP_004136759.1 CDS MfeM64YM_0380 NC_014921.1 418460 420028 R hypothetical protein complement(418460..420028) Mycoplasma fermentans M64 10112690 YP_004136760.1 CDS MfeM64YM_0381 NC_014921.1 420052 420306 R hypothetical protein complement(420052..420306) Mycoplasma fermentans M64 10112691 YP_004136761.1 CDS MfeM64YM_0382 NC_014921.1 420306 420857 R Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03111; putative single-stranded DNA-binding protein complement(420306..420857) Mycoplasma fermentans M64 10112692 YP_004136762.1 CDS MfeM64YM_0383 NC_014921.1 420867 421583 R hypothetical protein complement(420867..421583) Mycoplasma fermentans M64 10112693 YP_004136763.1 CDS MfeM64YM_0384 NC_014921.1 421596 421760 R hypothetical protein complement(421596..421760) Mycoplasma fermentans M64 10112694 YP_004136764.1 CDS MfeM64YM_0385 NC_014921.1 421831 422697 R hypothetical protein complement(421831..422697) Mycoplasma fermentans M64 10112695 YP_004136765.1 CDS MfeM64YM_0386 NC_014921.1 422687 422875 R piwi protein complement(422687..422875) Mycoplasma fermentans M64 10112696 YP_004136766.1 CDS MfeM64YM_0387 NC_014921.1 422884 423831 R Functional Classification (COG): Function unknown; COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown].; hypothetical protein complement(422884..423831) Mycoplasma fermentans M64 10112697 YP_004136767.1 CDS MfeM64YM_0388 NC_014921.1 423833 424021 R hypothetical protein complement(423833..424021) Mycoplasma fermentans M64 10112698 YP_004136768.1 CDS MfeM64YM_0389 NC_014921.1 424032 424988 R Functional Classification (COG): Intracellular trafficking and secretion; COG3505, VirD4, Type IV secretory pathway, VirD4 components [Intracellular trafficking and secretion].; hypothetical protein complement(424032..424988) Mycoplasma fermentans M64 10112699 YP_004136769.1 CDS MfeM64YM_0390 NC_014921.1 425289 426251 R Functional Classification (COG): Intracellular trafficking and secretion; pfam02534, TraG, TraG/TraD family. These proteins contain a P-loop and walker-B site for nucleotide binding. TraG is essential for DNA transfer in bacterial conjugation. These proteins are thought to mediate interactions between the DNA-processing (Dtr) and the mating pair formation (Mpf) systems.; hypothetical protein complement(425289..426251) Mycoplasma fermentans M64 10112700 YP_004136770.1 CDS MfeM64YM_0391 NC_014921.1 426251 426718 R hypothetical protein complement(426251..426718) Mycoplasma fermentans M64 10112701 YP_004136771.1 CDS MfeM64YM_0392 NC_014921.1 426728 427930 R hypothetical protein complement(426728..427930) Mycoplasma fermentans M64 10112702 YP_004136772.1 CDS MfeM64YM_0393 NC_014921.1 428202 428921 R hypothetical protein complement(428202..428921) Mycoplasma fermentans M64 10112703 YP_004136773.1 CDS lepA NC_014921.1 429206 431005 R Functional Classification (COG): Cell envelope biogenesis, outer membrane; KEGG Orthology: K03596; gtp-binding protein lepa complement(429206..431005) Mycoplasma fermentans M64 10112704 YP_004136774.1 CDS licA NC_014921.1 431093 431821 D Functional Classification (COG): Cell envelope biogenesis, outer membrane; PTS system, lichenan-specific iia component 431093..431821 Mycoplasma fermentans M64 10112705 YP_004136775.1 CDS MfeM64YM_0396 NC_014921.1 431978 432589 D hypothetical protein 431978..432589 Mycoplasma fermentans M64 10112706 YP_004136776.1 CDS MfeM64YM_0397 NC_014921.1 432749 436639 D Functional Classification (COG): DNA replication, recombination, and repair; ATP-binding protein 432749..436639 Mycoplasma fermentans M64 10112707 YP_004136777.1 CDS int-2 NC_014921.1 436972 437247 R int complement(436972..437247) Mycoplasma fermentans M64 10112708 YP_004136778.1 CDS MfeM64YM_0399 NC_014921.1 437505 441320 D hypothetical protein 437505..441320 Mycoplasma fermentans M64 10112709 YP_004136779.1 CDS MfeM64YM_0400 NC_014921.1 441607 441780 D hypothetical protein 441607..441780 Mycoplasma fermentans M64 10112710 YP_004136780.1 CDS MfeM64YM_0401 NC_014921.1 441907 442155 D Functional Classification (COG): Transcription; transcriptional regulator, rpir family 441907..442155 Mycoplasma fermentans M64 10112711 YP_004136781.1 CDS MfeM64YM_0402 NC_014921.1 442155 442547 D hypothetical protein 442155..442547 Mycoplasma fermentans M64 10112712 YP_004136782.1 CDS upp NC_014921.1 442736 443362 D Functional Classification (COG): Nucleotide transport and metabolism; KEGG Orthology: K00761; uracil phosphoribosyltransferase 442736..443362 Mycoplasma fermentans M64 10112713 YP_004136783.1 CDS MfeM64YM_0404 NC_014921.1 443349 444125 D Functional Classification (COG): Function unknown; COG3601, COG3601, membrane protein [Function unknown].; hypothetical protein 443349..444125 Mycoplasma fermentans M64 10112714 YP_004136784.1 CDS leuS NC_014921.1 444151 446493 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01869; leucyl-tRNA synthetase 444151..446493 Mycoplasma fermentans M64 10112715 YP_004136785.1 CDS lon NC_014921.1 446634 449615 D Functional Classification (COG): Posttranslational modification, protein turnover, chaperones; KEGG Orthology: K01338; putative heat shock ATP-dependent protease 446634..449615 Mycoplasma fermentans M64 10112716 YP_004136786.1 CDS MfeM64YM_0407 NC_014921.1 449702 450079 D hypothetical protein 449702..450079 Mycoplasma fermentans M64 10112717 YP_004136787.1 CDS MfeM64YM_0408 NC_014921.1 450116 450619 R hypothetical protein complement(450116..450619) Mycoplasma fermentans M64 10112718 YP_004136788.1 CDS MfeM64YM_0409 NC_014921.1 450676 451389 R hypothetical protein complement(450676..451389) Mycoplasma fermentans M64 10112719 YP_004136789.1 CDS MfeM64YM_0410 NC_014921.1 451451 451906 R hypothetical protein complement(451451..451906) Mycoplasma fermentans M64 10112720 YP_004136790.1 CDS MfeM64YM_0411 NC_014921.1 452035 452454 R hypothetical protein complement(452035..452454) Mycoplasma fermentans M64 10112721 YP_004136791.1 CDS MfeM64YM_0412 NC_014921.1 452530 453306 R Functional Classification (COG): Function unknown; pfam01784, NIF3, NIF3 (NGG1p interacting factor 3). This family contains several NIF3 (NGG1p interacting factor 3) protein homologues. NIF3 interacts with the yeast transcriptional coactivator NGG1p which is part of the ADA complex, the exact function of this interaction is unknown.; hypothetical protein complement(452530..453306) Mycoplasma fermentans M64 10112722 YP_004136792.1 CDS rpoD NC_014921.1 453306 454775 R Functional Classification (COG): Transcription; KEGG Orthology: K03086; putative RNA polymerase sigma factor complement(453306..454775) Mycoplasma fermentans M64 10112723 YP_004136793.1 CDS dnaG NC_014921.1 454768 456675 R Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K02316; putative DNA primase complement(454768..456675) Mycoplasma fermentans M64 10112724 YP_004136794.1 CDS glyS NC_014921.1 456709 458070 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01880; glycyl-tRNA synthetase complement(456709..458070) Mycoplasma fermentans M64 10112725 YP_004136795.1 CDS MfeM64YM_0416 NC_014921.1 458150 459871 R COG0327, COG0327, Uncharacterized conserved protein [Function unknown].; hypothetical protein complement(458150..459871) Mycoplasma fermentans M64 10112726 YP_004136796.1 CDS MfeM64YM_0417 NC_014921.1 460002 460133 R hypothetical protein complement(460002..460133) Mycoplasma fermentans M64 10112727 YP_004136797.1 CDS rpsA NC_014921.1 460159 460518 D KEGG Orthology: K02945; 30S ribosomal protein s1 460159..460518 Mycoplasma fermentans M64 10112728 YP_004136798.1 CDS pgi-1 NC_014921.1 460505 461749 D Functional Classification (COG): Carbohydrate transport and metabolism; glucose-6-phosphate isomerase 460505..461749 Mycoplasma fermentans M64 10112729 YP_004136799.1 CDS pgi-2 NC_014921.1 461858 463138 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K01810; glucose-6-phosphate isomerase 461858..463138 Mycoplasma fermentans M64 10112730 YP_004136800.1 CDS MfeM64YM_0421 NC_014921.1 463321 464601 D Functional Classification (COG): General function prediction only; KEGG Orthology: K07133; aaa+ superfamily atpase 463321..464601 Mycoplasma fermentans M64 10112731 YP_004136801.1 CDS MfeM64YM_0422 NC_014921.1 464680 464814 D hypothetical protein 464680..464814 Mycoplasma fermentans M64 10112732 YP_004136802.1 CDS tnpA-12 NC_014921.1 465021 465599 D Functional Classification (COG): DNA replication, recombination, and repair; transposase for is1630-like insertion sequence element 465021..465599 Mycoplasma fermentans M64 10112733 YP_004136803.1 CDS MfeM64YM_0424 NC_014921.1 465706 465843 D hypothetical protein 465706..465843 Mycoplasma fermentans M64 10112734 YP_004136804.1 CDS MfeM64YM_0425 NC_014921.1 466041 466139 R hypothetical protein complement(466041..466139) Mycoplasma fermentans M64 10112735 YP_004136805.1 CDS mutM NC_014921.1 466255 467076 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K10563; DNA glycosylase 466255..467076 Mycoplasma fermentans M64 10112736 YP_004136806.1 CDS MfeM64YM_0427 NC_014921.1 467109 468374 R Functional Classification (COG): General function prediction only; COG1373, COG1373, ATPase (AAA+ superfamily) [General function prediction only]; KEGG Orthology: K07133; hypothetical protein complement(467109..468374) Mycoplasma fermentans M64 10112737 YP_004136807.1 CDS MfeM64YM_0429 NC_014921.1 469665 469763 R hypothetical protein complement(469665..469763) Mycoplasma fermentans M64 10112739 YP_004136808.1 CDS MfeM64YM_0430 NC_014921.1 469846 470577 D Functional Classification (COG): Function unknown; KEGG Orthology: K08591; upf0078 membrane protein mag3620 469846..470577 Mycoplasma fermentans M64 10112740 YP_004136809.1 CDS MfeM64YM_0432 NC_014921.1 471476 471907 R hypothetical protein complement(471476..471907) Mycoplasma fermentans M64 10112742 YP_004136810.1 CDS p37 NC_014921.1 472205 473383 D KEGG Orthology: K02044; p37-like abc transporter substrate-binding lipoprotein 472205..473383 Mycoplasma fermentans M64 10112743 YP_004136811.1 CDS phnC NC_014921.1 473385 474125 D Functional Classification (COG): Inorganic ion transport and metabolism; KEGG Orthology: K02041; alkylphosphonate abc transporter, ATP-binding component 473385..474125 Mycoplasma fermentans M64 10112744 YP_004136812.1 CDS MfeM64YM_0435 NC_014921.1 474133 475830 R Functional Classification (COG): Inorganic ion transport and metabolism; KEGG Orthology: K02042; abc-type phosphate/phosphonate transport system, permease component complement(474133..475830) Mycoplasma fermentans M64 10112745 YP_004136813.1 CDS MfeM64YM_0436 NC_014921.1 476126 479941 D hypothetical protein 476126..479941 Mycoplasma fermentans M64 10112746 YP_004136814.1 CDS MfeM64YM_0437 NC_014921.1 480284 481171 R Functional Classification (COG): DNA replication, recombination, and repair; transposase mutator type complement(480284..481171) Mycoplasma fermentans M64 10112747 YP_004136815.1 CDS MfeM64YM_0438 NC_014921.1 481303 481356 R hypothetical protein complement(481303..481356) Mycoplasma fermentans M64 10112748 YP_004136816.1 CDS MfeM64YM_0439 NC_014921.1 481559 485374 R hypothetical protein complement(481559..485374) Mycoplasma fermentans M64 10112749 YP_004136817.1 CDS MfeM64YM_0440 NC_014921.1 485550 485885 R Functional Classification (COG): DNA replication, recombination, and repair; transposase mutator type complement(485550..485885) Mycoplasma fermentans M64 10112750 YP_004136818.1 CDS MfeM64YM_0441 NC_014921.1 485902 486666 R Functional Classification (COG): DNA replication, recombination, and repair; transposase, mutator type complement(485902..486666) Mycoplasma fermentans M64 10112751 YP_004136819.1 CDS MfeM64YM_0443 NC_014921.1 488347 489513 R hypothetical protein complement(488347..489513) Mycoplasma fermentans M64 10112753 YP_004136820.1 CDS MfeM64YM_0444 NC_014921.1 489561 490487 R hypothetical protein complement(489561..490487) Mycoplasma fermentans M64 10112754 YP_004136821.1 CDS MfeM64YM_0445 NC_014921.1 490721 490849 R hypothetical protein complement(490721..490849) Mycoplasma fermentans M64 10112755 YP_004136822.1 CDS MfeM64YM_0446 NC_014921.1 491077 495342 R hypothetical protein complement(491077..495342) Mycoplasma fermentans M64 10112756 YP_004136823.1 CDS MfeM64YM_0447 NC_014921.1 495388 496071 R hypothetical protein complement(495388..496071) Mycoplasma fermentans M64 10112757 YP_004136824.1 CDS trsE-4 NC_014921.1 496052 498865 R Functional Classification (COG): Intracellular trafficking and secretion; trse-like protein complement(496052..498865) Mycoplasma fermentans M64 10112758 YP_004136825.1 CDS MfeM64YM_0449 NC_014921.1 498881 500071 R hypothetical protein complement(498881..500071) Mycoplasma fermentans M64 10112759 YP_004136826.1 CDS MfeM64YM_0450 NC_014921.1 500071 500352 R hypothetical protein complement(500071..500352) Mycoplasma fermentans M64 10112760 YP_004136827.1 CDS MfeM64YM_0451 NC_014921.1 500467 502035 R hypothetical protein complement(500467..502035) Mycoplasma fermentans M64 10112761 YP_004136828.1 CDS MfeM64YM_0452 NC_014921.1 502059 502313 R hypothetical protein complement(502059..502313) Mycoplasma fermentans M64 10112762 YP_004136829.1 CDS MfeM64YM_0453 NC_014921.1 502313 502864 R Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03111; putative single-stranded DNA-binding protein complement(502313..502864) Mycoplasma fermentans M64 10112763 YP_004136830.1 CDS MfeM64YM_0454 NC_014921.1 502874 503590 R hypothetical protein complement(502874..503590) Mycoplasma fermentans M64 10112764 YP_004136831.1 CDS MfeM64YM_0455 NC_014921.1 503603 503842 R hypothetical protein complement(503603..503842) Mycoplasma fermentans M64 10112765 YP_004136832.1 CDS MfeM64YM_0456 NC_014921.1 503851 504798 R Functional Classification (COG): Function unknown; COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown].; hypothetical protein complement(503851..504798) Mycoplasma fermentans M64 10112766 YP_004136833.1 CDS MfeM64YM_0457 NC_014921.1 504800 504988 R hypothetical protein complement(504800..504988) Mycoplasma fermentans M64 10112767 YP_004136834.1 CDS MfeM64YM_0458 NC_014921.1 504999 507218 R Functional Classification (COG): Intracellular trafficking and secretion; cd01126, TraG_VirD4, The TraG/TraD/VirD4 family are bacterial conjugation proteins involved in type IV secretion. These proteins aid the transfer of DNA from the plasmid into the host bacterial chromosome. They contain an ATP binding domain. VirD4 is involved in DNA transfer to plant cells and is required for virulence.; hypothetical protein complement(504999..507218) Mycoplasma fermentans M64 10112768 YP_004136835.1 CDS MfeM64YM_0459 NC_014921.1 507218 507685 R cd01126, TraG_VirD4, The TraG/TraD/VirD4 family are bacterial conjugation proteins involved in type IV secretion. These proteins aid the transfer of DNA from the plasmid into the host bacterial chromosome. They contain an ATP binding domain. VirD4 is involved in DNA transfer to plant cells and is required for virulence.; hypothetical protein complement(507218..507685) Mycoplasma fermentans M64 10112769 YP_004136836.1 CDS MfeM64YM_0460 NC_014921.1 507695 508897 R hypothetical protein complement(507695..508897) Mycoplasma fermentans M64 10112770 YP_004136837.1 CDS MfeM64YM_0461 NC_014921.1 508918 509109 R hypothetical protein complement(508918..509109) Mycoplasma fermentans M64 10112771 YP_004136838.1 CDS MfeM64YM_0462 NC_014921.1 509340 510059 R hypothetical protein complement(509340..510059) Mycoplasma fermentans M64 10112772 YP_004136839.1 CDS MfeM64YM_0464 NC_014921.1 510780 511997 R hypothetical protein complement(510780..511997) Mycoplasma fermentans M64 10112774 YP_004136840.1 CDS MfeM64YM_0465 NC_014921.1 512073 513293 R hypothetical protein complement(512073..513293) Mycoplasma fermentans M64 10112775 YP_004136841.1 CDS MfeM64YM_0466 NC_014921.1 513298 513543 D hypothetical protein 513298..513543 Mycoplasma fermentans M64 10112776 YP_004136842.1 CDS MfeM64YM_0467 NC_014921.1 513576 515951 R hypothetical protein complement(513576..515951) Mycoplasma fermentans M64 10112777 YP_004136843.1 CDS trsE-5 NC_014921.1 515993 518722 R Functional Classification (COG): Intracellular trafficking and secretion; trse-like protein complement(515993..518722) Mycoplasma fermentans M64 10112778 YP_004136844.1 CDS MfeM64YM_0469 NC_014921.1 518725 520107 R hypothetical protein complement(518725..520107) Mycoplasma fermentans M64 10112779 YP_004136845.1 CDS MfeM64YM_0470 NC_014921.1 520110 520487 R hypothetical protein complement(520110..520487) Mycoplasma fermentans M64 10112780 YP_004136846.1 CDS MfeM64YM_0471 NC_014921.1 520511 522031 R hypothetical protein complement(520511..522031) Mycoplasma fermentans M64 10112781 YP_004136847.1 CDS MfeM64YM_0472 NC_014921.1 522137 522580 R hypothetical protein complement(522137..522580) Mycoplasma fermentans M64 10112782 YP_004136848.1 CDS MfeM64YM_0473 NC_014921.1 522586 523176 R hypothetical protein complement(522586..523176) Mycoplasma fermentans M64 10112783 YP_004136849.1 CDS MfeM64YM_0474 NC_014921.1 523163 524062 R hypothetical protein complement(523163..524062) Mycoplasma fermentans M64 10112784 YP_004136850.1 CDS MfeM64YM_0475 NC_014921.1 524082 524549 R hypothetical protein complement(524082..524549) Mycoplasma fermentans M64 10112785 YP_004136851.1 CDS MfeM64YM_0476 NC_014921.1 524575 525765 R Functional Classification (COG): DNA replication, recombination, and repair; type ii r/m system DNA methylase complement(524575..525765) Mycoplasma fermentans M64 10112786 YP_004136852.1 CDS ruvB-4 NC_014921.1 525749 526456 R Functional Classification (COG): DNA replication, recombination, and repair; holliday junction ATP-dependent DNA helicase ruvb complement(525749..526456) Mycoplasma fermentans M64 10112787 YP_004136853.1 CDS ruvA-4 NC_014921.1 526475 526657 R holliday junction ATP-dependent DNA helicase ruva complement(526475..526657) Mycoplasma fermentans M64 10112788 YP_004136854.1 CDS ruvA-5 NC_014921.1 526639 527076 R Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03550; holliday junction ATP-dependent DNA helicase ruva complement(526639..527076) Mycoplasma fermentans M64 10112789 YP_004136855.1 CDS MfeM64YM_0480 NC_014921.1 527090 527560 R hypothetical protein complement(527090..527560) Mycoplasma fermentans M64 10112790 YP_004136856.1 CDS MfeM64YM_0481 NC_014921.1 527563 527787 R hypothetical protein complement(527563..527787) Mycoplasma fermentans M64 10112791 YP_004136857.1 CDS smf-3 NC_014921.1 527804 528298 R Functional Classification (COG): DNA replication, recombination, and repair/Intracellular trafficking and secretion; DNA processing protein smf complement(527804..528298) Mycoplasma fermentans M64 10112792 YP_004136858.1 CDS MfeM64YM_0483 NC_014921.1 528301 529167 R hypothetical protein complement(528301..529167) Mycoplasma fermentans M64 10112793 YP_004136859.1 CDS MfeM64YM_0484 NC_014921.1 529468 529743 R hypothetical protein complement(529468..529743) Mycoplasma fermentans M64 10112794 YP_004136860.1 CDS MfeM64YM_0485 NC_014921.1 530006 530884 R hypothetical protein complement(530006..530884) Mycoplasma fermentans M64 10112795 YP_004136861.1 CDS MfeM64YM_0486 NC_014921.1 531041 532156 R hypothetical protein complement(531041..532156) Mycoplasma fermentans M64 10112796 YP_004136862.1 CDS ligA NC_014921.1 532639 534621 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K01972; DNA ligase 532639..534621 Mycoplasma fermentans M64 10112797 YP_004136863.1 CDS tpiA NC_014921.1 534715 535470 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K01803; triosephosphate isomerase 534715..535470 Mycoplasma fermentans M64 10112798 YP_004136864.1 CDS nagB-1 NC_014921.1 535561 536298 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K02564; glucosamine-6-phosphate deaminase complement(535561..536298) Mycoplasma fermentans M64 10112799 YP_004136865.1 CDS nagA NC_014921.1 536311 537408 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K01443; n-acetylglucosamine-6-phosphate deacetylase complement(536311..537408) Mycoplasma fermentans M64 10112800 YP_004136866.1 CDS MfeM64YM_0491 NC_014921.1 537448 537540 R hypothetical protein complement(537448..537540) Mycoplasma fermentans M64 10112801 YP_004136867.1 CDS pgk NC_014921.1 537641 538825 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K00927; phosphoglycerate kinase 537641..538825 Mycoplasma fermentans M64 10112802 YP_004136868.1 CDS ptsG-3 NC_014921.1 538880 539254 R ptsg complement(538880..539254) Mycoplasma fermentans M64 10112803 YP_004136869.1 CDS trpS NC_014921.1 539406 540407 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01867; tryptophanyl-tRNA synthetase 539406..540407 Mycoplasma fermentans M64 10112804 YP_004136870.1 CDS MfeM64YM_0495 NC_014921.1 540547 540627 R hypothetical protein complement(540547..540627) Mycoplasma fermentans M64 10112805 YP_004136871.1 CDS thrS NC_014921.1 540671 542419 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01868; threonyl-tRNA synthetase 540671..542419 Mycoplasma fermentans M64 10112806 YP_004136872.1 CDS MfeM64YM_0497 NC_014921.1 542412 542879 D hypothetical protein 542412..542879 Mycoplasma fermentans M64 10112807 YP_004136873.1 CDS MfeM64YM_0498 NC_014921.1 542975 543502 D Functional Classification (COG): Secondary metabolites biosynthesis, transport, and catabolism; isochorismatase family protein 542975..543502 Mycoplasma fermentans M64 10112808 YP_004136874.1 CDS MfeM64YM_0499 NC_014921.1 543505 543786 D pfam01713, Smr, Smr domain. This family includes the Smr (Small MutS Related) proteins, and the C-terminal region of the MutS2 protein. It has been suggested that this domain interacts with the MutS1 protein in the case of Smr proteins and with the N-terminal MutS related region of MutS2.; hypothetical protein 543505..543786 Mycoplasma fermentans M64 10112809 YP_004136875.1 CDS MfeM64YM_0500 NC_014921.1 543841 545154 R hypothetical protein complement(543841..545154) Mycoplasma fermentans M64 10112810 YP_004136876.1 CDS deoC NC_014921.1 545281 545949 R Functional Classification (COG): Nucleotide transport and metabolism; KEGG Orthology: K01619; deoxyribose-phosphate aldolase complement(545281..545949) Mycoplasma fermentans M64 10112811 YP_004136877.1 CDS deoA NC_014921.1 545972 547267 R Functional Classification (COG): Nucleotide transport and metabolism; KEGG Orthology: K00758; pyrimidine-nucleoside phosphorylase complement(545972..547267) Mycoplasma fermentans M64 10112812 YP_004136878.1 CDS deoD-2 NC_014921.1 547281 547985 R Functional Classification (COG): Nucleotide transport and metabolism; KEGG Orthology: K03784; purine-nucleoside phosphorylase complement(547281..547985) Mycoplasma fermentans M64 10112813 YP_004136879.1 CDS pfkA NC_014921.1 548375 549367 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K00850; 6-phosphofructokinase 548375..549367 Mycoplasma fermentans M64 10112814 YP_004136880.1 CDS MfeM64YM_0505 NC_014921.1 549594 550418 D Functional Classification (COG): General function prediction only; KEGG Orthology: K07024; cof family had hydrolase protein, conserved 549594..550418 Mycoplasma fermentans M64 10112815 YP_004136881.1 CDS MfeM64YM_0506 NC_014921.1 550605 551573 D Functional Classification (COG): General function prediction only; KEGG Orthology: K07133; aaa+ superfamily atpase 550605..551573 Mycoplasma fermentans M64 10112816 YP_004136882.1 CDS obg NC_014921.1 551888 553156 D Functional Classification (COG): General function prediction only; KEGG Orthology: K03979; gtp-binding protein 551888..553156 Mycoplasma fermentans M64 10112817 YP_004136883.1 CDS nagB-2 NC_014921.1 553252 553989 D Functional Classification (COG): Carbohydrate transport and metabolism; glucosamine-6-phosphate deaminase 553252..553989 Mycoplasma fermentans M64 10112818 YP_004136884.1 CDS hpt NC_014921.1 554023 554580 R Functional Classification (COG): Nucleotide transport and metabolism; KEGG Orthology: K00760; hypoxanthine phosphoribosyltransferase complement(554023..554580) Mycoplasma fermentans M64 10112819 YP_004136885.1 CDS dgk-1 NC_014921.1 554573 555244 R Functional Classification (COG): Nucleotide transport and metabolism; deoxyguanosine kinase complement(554573..555244) Mycoplasma fermentans M64 10112820 YP_004136886.1 CDS dgk-2 NC_014921.1 555253 555924 R Functional Classification (COG): Nucleotide transport and metabolism; KEGG Orthology: K00904; deoxyguanosine kinase complement(555253..555924) Mycoplasma fermentans M64 10112821 YP_004136887.1 CDS greA NC_014921.1 556033 556524 R Functional Classification (COG): Transcription; KEGG Orthology: K03624; transcription elongation factor complement(556033..556524) Mycoplasma fermentans M64 10112822 YP_004136888.1 CDS MfeM64YM_0513 NC_014921.1 556764 556856 D hypothetical protein 556764..556856 Mycoplasma fermentans M64 10112823 YP_004136889.1 CDS MfeM64YM_0514 NC_014921.1 557042 557770 R hypothetical protein complement(557042..557770) Mycoplasma fermentans M64 10112824 YP_004136890.1 CDS MfeM64YM_0515 NC_014921.1 557763 558197 R Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K07447; putative holliday junction resolvase complement(557763..558197) Mycoplasma fermentans M64 10112825 YP_004136891.1 CDS alaS NC_014921.1 558197 560818 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01872; alanyl-tRNA synthetase complement(558197..560818) Mycoplasma fermentans M64 10112826 YP_004136892.1 CDS mnmA NC_014921.1 560828 561946 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K00566; tRNA-specific 2-thiouridylase mnma complement(560828..561946) Mycoplasma fermentans M64 10112827 YP_004136893.1 CDS argS-1 NC_014921.1 562638 564266 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01887; arginyl-tRNA synthetase complement(562638..564266) Mycoplasma fermentans M64 10112828 YP_004136894.1 CDS MfeM64YM_0519 NC_014921.1 564490 564873 R hypothetical protein complement(564490..564873) Mycoplasma fermentans M64 10112829 YP_004136895.1 CDS potE-1 NC_014921.1 564890 566659 R amino acid permease complement(564890..566659) Mycoplasma fermentans M64 10112830 YP_004136896.1 CDS arcC NC_014921.1 566713 567645 R Functional Classification (COG): Amino acid transport and metabolism; KEGG Orthology: K00926; carbamate kinase complement(566713..567645) Mycoplasma fermentans M64 10112831 YP_004136897.1 CDS arcB NC_014921.1 567702 568745 R Functional Classification (COG): Amino acid transport and metabolism; KEGG Orthology: K00611; ornithine carbamoyltransferase complement(567702..568745) Mycoplasma fermentans M64 10112832 YP_004136898.1 CDS arcA NC_014921.1 568836 570050 R Functional Classification (COG): Amino acid transport and metabolism; KEGG Orthology: K01478; arginine deiminase complement(568836..570050) Mycoplasma fermentans M64 10112833 YP_004136899.1 CDS MfeM64YM_0524 NC_014921.1 570346 572601 R pfam11074, DUF2779, Domain of unknown function(DUF2779). This domain is conserved in bacteria. The function is not known.; hypothetical protein complement(570346..572601) Mycoplasma fermentans M64 10112834 YP_004136900.1 CDS MfeM64YM_0525 NC_014921.1 572579 573487 R hypothetical protein complement(572579..573487) Mycoplasma fermentans M64 10112835 YP_004136901.1 CDS MfeM64YM_0526 NC_014921.1 573500 574855 R hypothetical protein complement(573500..574855) Mycoplasma fermentans M64 10112836 YP_004136902.1 CDS ptsI NC_014921.1 574971 576680 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K08483; phosphoenolpyruvate-protein phosphotransferase complement(574971..576680) Mycoplasma fermentans M64 10112837 YP_004136903.1 CDS pepO NC_014921.1 576919 578835 R Functional Classification (COG): Posttranslational modification, protein turnover, chaperones; KEGG Orthology: K07386; endopeptidase o complement(576919..578835) Mycoplasma fermentans M64 10112838 YP_004136904.1 CDS rsmE NC_014921.1 578902 579582 R Functional Classification (COG): Function unknown; KEGG Orthology: K09761; chp protein complement(578902..579582) Mycoplasma fermentans M64 10112839 YP_004136905.1 CDS ftsZ NC_014921.1 579747 580895 R Functional Classification (COG): Cell division and chromosome partitioning; KEGG Orthology: K03531; cell division protein ftsz complement(579747..580895) Mycoplasma fermentans M64 10112840 YP_004136906.1 CDS MfeM64YM_0531 NC_014921.1 580932 582113 R hypothetical protein complement(580932..582113) Mycoplasma fermentans M64 10112841 YP_004136907.1 CDS mraW NC_014921.1 582163 583068 R Functional Classification (COG): Cell envelope biogenesis, outer membrane; KEGG Orthology: K03438; s-adenosyl-methyltransferase mraw complement(582163..583068) Mycoplasma fermentans M64 10112842 YP_004136908.1 CDS mraZ NC_014921.1 583070 583504 R Functional Classification (COG): Function unknown; KEGG Orthology: K03925; protein mraz complement(583070..583504) Mycoplasma fermentans M64 10112843 YP_004136909.1 CDS ktrA NC_014921.1 583748 584425 R Functional Classification (COG): Inorganic ion transport and metabolism; KEGG Orthology: K03499; potassium uptake protein ktra complement(583748..584425) Mycoplasma fermentans M64 10112844 YP_004136910.1 CDS ktrB NC_014921.1 584608 586149 D Functional Classification (COG): Inorganic ion transport and metabolism; potassium uptake protein ktrb 584608..586149 Mycoplasma fermentans M64 10112845 YP_004136911.1 CDS MfeM64YM_0536 NC_014921.1 586154 586606 D hypothetical protein 586154..586606 Mycoplasma fermentans M64 10112846 YP_004136912.1 CDS MfeM64YM_0537 NC_014921.1 586650 587480 D Functional Classification (COG): Transcription; transcriptional regulator 586650..587480 Mycoplasma fermentans M64 10112847 YP_004136913.1 CDS nanE NC_014921.1 587510 588205 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K01788; putative n-acetylmannosamine-6-phosphate 2-epimerase complement(587510..588205) Mycoplasma fermentans M64 10112848 YP_004136914.1 CDS ptsG-4 NC_014921.1 588195 589976 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K02778; PTS system, glucose-specific iiabc component complement(588195..589976) Mycoplasma fermentans M64 10112849 YP_004136915.1 CDS cutc NC_014921.1 590208 590954 D Functional Classification (COG): Inorganic ion transport and metabolism; KEGG Orthology: K06201; copper homeostasis protein cutc-like protein 590208..590954 Mycoplasma fermentans M64 10112850 YP_004136916.1 CDS rpsB NC_014921.1 591186 592178 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02967; 30S ribosomal protein S2 591186..592178 Mycoplasma fermentans M64 10112851 YP_004136917.1 CDS tsf NC_014921.1 592187 593059 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02357; elongation factor ts 592187..593059 Mycoplasma fermentans M64 10112852 YP_004136918.1 CDS MfeM64YM_0543 NC_014921.1 593293 593820 D hypothetical protein 593293..593820 Mycoplasma fermentans M64 10112853 YP_004136919.1 CDS fruA-1 NC_014921.1 593915 594394 R Functional Classification (COG): Carbohydrate transport and metabolism/Signal transduction mechanisms; KEGG Orthology: K02806; PTS system, fructose-specific family, iiabc components complement(593915..594394) Mycoplasma fermentans M64 10112854 YP_004136920.1 CDS MfeM64YM_0545 NC_014921.1 594415 595296 R Functional Classification (COG): Function unknown; COG1307, DegV, Uncharacterized protein conserved in bacteria [Function unknown].; hypothetical protein complement(594415..595296) Mycoplasma fermentans M64 10112855 YP_004136921.1 CDS MfeM64YM_0546 NC_014921.1 595489 597105 R hypothetical protein complement(595489..597105) Mycoplasma fermentans M64 10112856 YP_004136922.1 CDS pcrA NC_014921.1 597149 599320 R Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03657; ATP-dependent DNA helicase complement(597149..599320) Mycoplasma fermentans M64 10112857 YP_004136923.1 CDS MfeM64YM_0548 NC_014921.1 599333 599983 R hypothetical protein complement(599333..599983) Mycoplasma fermentans M64 10112858 YP_004136924.1 CDS MfeM64YM_0549 NC_014921.1 599992 600999 R glycosyltransferase complement(599992..600999) Mycoplasma fermentans M64 10112859 YP_004136925.1 CDS asnS-1 NC_014921.1 601009 602367 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01893; asparaginyl-tRNA synthetase complement(601009..602367) Mycoplasma fermentans M64 10112860 YP_004136926.1 CDS MfeM64YM_0551 NC_014921.1 602657 603391 D hypothetical protein 602657..603391 Mycoplasma fermentans M64 10112861 YP_004136927.1 CDS pepC NC_014921.1 603495 604814 D Functional Classification (COG): Amino acid transport and metabolism; KEGG Orthology: K01372; aminopeptidase c 603495..604814 Mycoplasma fermentans M64 10112862 YP_004136928.1 CDS MfeM64YM_0553 NC_014921.1 604860 605057 R hypothetical protein complement(604860..605057) Mycoplasma fermentans M64 10112863 YP_004136929.1 CDS mgtE NC_014921.1 605067 606509 R Functional Classification (COG): Inorganic ion transport and metabolism; KEGG Orthology: K06213; mg2+ ion transporter complement(605067..606509) Mycoplasma fermentans M64 10112864 YP_004136930.1 CDS MfeM64YM_0555 NC_014921.1 606511 607092 R Functional Classification (COG): Function unknown; pfam02457, DisA_N, DisA bacterial checkpoint controller nucleotide-binding. The DisA protein is a bacterial checkpoint protein that dimerizes into an octameric complex. The protein consists of three distinct domains. This domain is the first and is a globular, nucleotide-binding region; the next 146-289 residues constitute the DisA-linker family, pfam10635, that consists of an elongated bundle of three alpha helices (alpha-6, alpha-10, and alpha-11), one side of which carries an additional three helices (alpha7-9), which thus forms a spine like-linker between domains 1 and 3. The C-terminal residues, of domain 3, are represented by family HHH, pfam00633, the specific DNA-binding domain. The octameric complex thus has structurally linked nucleotide-binding and DNA-binding HhH domains and the nucleotide-binding domains are bound to a cyclic di-adenosine phosphate such that DisA is a specific di-adenylate cyclase. The di-adenylate cyclase activity is strongly suppressed by binding to branched DNA, but not to duplex or single-stranded DNA, suggesting a role for DisA as a monitor of the presence of stalled replication forks or recombination intermediates via DNA structure-modulated c-di-AMP synthesis.; hypothetical protein complement(606511..607092) Mycoplasma fermentans M64 10112865 YP_004136931.1 CDS MfeM64YM_0556 NC_014921.1 607102 607404 R COG1624, COG1624, Uncharacterized conserved protein [Function unknown].; hypothetical protein complement(607102..607404) Mycoplasma fermentans M64 10112866 YP_004136932.1 CDS MfeM64YM_0557 NC_014921.1 607679 609022 R hypothetical protein complement(607679..609022) Mycoplasma fermentans M64 10112867 YP_004136933.1 CDS MfeM64YM_0558 NC_014921.1 609133 610329 R Functional Classification (COG): Transcription; transcriptional regulator with hth domain complement(609133..610329) Mycoplasma fermentans M64 10112868 YP_004136934.1 CDS MfeM64YM_0559 NC_014921.1 610402 610554 D hypothetical protein 610402..610554 Mycoplasma fermentans M64 10112869 YP_004136935.1 CDS MfeM64YM_0560 NC_014921.1 610627 611796 D Functional Classification (COG): Defense mechanisms; abc transporter ATP-binding protein 610627..611796 Mycoplasma fermentans M64 10112870 YP_004136936.1 CDS MfeM64YM_0561 NC_014921.1 611793 611894 R hypothetical protein complement(611793..611894) Mycoplasma fermentans M64 10112871 YP_004136937.1 CDS MfeM64YM_0562 NC_014921.1 611971 612444 D Functional Classification (COG): Defense mechanisms; abc transporter, ATP-binding/permease protein 611971..612444 Mycoplasma fermentans M64 10112872 YP_004136938.1 CDS md2 NC_014921.1 612444 614276 D Functional Classification (COG): Defense mechanisms; abc transporter ATP binding protein 612444..614276 Mycoplasma fermentans M64 10112873 YP_004136939.1 CDS MfeM64YM_0564 NC_014921.1 614313 615563 R Functional Classification (COG): General function prediction only; KEGG Orthology: K07133; aaa+ superfamily atpase complement(614313..615563) Mycoplasma fermentans M64 10112874 YP_004136940.1 CDS MfeM64YM_0565 NC_014921.1 615886 616686 R Functional Classification (COG): General function prediction only; cof family had hydrolase protein complement(615886..616686) Mycoplasma fermentans M64 10112876 YP_004136941.1 CDS MfeM64YM_0566 NC_014921.1 616861 617535 R hypothetical protein complement(616861..617535) Mycoplasma fermentans M64 10112877 YP_004136942.1 CDS MfeM64YM_0567 NC_014921.1 617578 618735 R hypothetical protein complement(617578..618735) Mycoplasma fermentans M64 10112878 YP_004136943.1 CDS MfeM64YM_0568 NC_014921.1 618915 619259 R hypothetical protein complement(618915..619259) Mycoplasma fermentans M64 10112879 YP_004136944.1 CDS MfeM64YM_0569 NC_014921.1 619632 620267 R pfam10544, T5orf172, T5orf172 domain. This domain was identified by Iyer and colleagues.; hypothetical protein complement(619632..620267) Mycoplasma fermentans M64 10112880 YP_004136945.1 CDS MfeM64YM_0570 NC_014921.1 620751 621785 D hypothetical protein 620751..621785 Mycoplasma fermentans M64 10112881 YP_004136946.1 CDS hsdS-1 NC_014921.1 621996 622508 R type i restriction-modification system, s subunit complement(621996..622508) Mycoplasma fermentans M64 10112882 YP_004136947.1 CDS MfeM64YM_0572 NC_014921.1 622639 623400 R Functional Classification (COG): DNA replication, recombination, and repair; integrase complement(622639..623400) Mycoplasma fermentans M64 10112883 YP_004136948.1 CDS MfeM64YM_0573 NC_014921.1 623556 624554 D KEGG Orthology: K01154; pfam01420, Methylase_S, Type I restriction modification DNA specificity domain. This domain is also known as the target recognition domain (TRD). Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity subunit (this family), two modification (M) subunits and two restriction (R) subunits.; hypothetical protein 623556..624554 Mycoplasma fermentans M64 10112884 YP_004136949.1 CDS hsdS-2 NC_014921.1 624562 624873 D type i restriction-modification system, s subunit, putative 624562..624873 Mycoplasma fermentans M64 10112885 YP_004136950.1 CDS MfeM64YM_0575 NC_014921.1 624835 625587 R KEGG Orthology: K01154; pfam01420, Methylase_S, Type I restriction modification DNA specificity domain. This domain is also known as the target recognition domain (TRD). Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity subunit (this family), two modification (M) subunits and two restriction (R) subunits.; hypothetical protein complement(624835..625587) Mycoplasma fermentans M64 10112886 YP_004136951.1 CDS repB-1 NC_014921.1 625986 626840 D Functional Classification (COG): DNA replication, recombination, and repair; repb 625986..626840 Mycoplasma fermentans M64 10112887 YP_004136952.1 CDS MfeM64YM_0577 NC_014921.1 626849 627010 D hypothetical protein 626849..627010 Mycoplasma fermentans M64 10112888 YP_004136953.1 CDS MfeM64YM_0578 NC_014921.1 627003 627164 D hypothetical protein 627003..627164 Mycoplasma fermentans M64 10112889 YP_004136954.1 CDS marMP-1 NC_014921.1 627168 627632 D c-5 cytosine-specific DNA methylase 627168..627632 Mycoplasma fermentans M64 10112890 YP_004136955.1 CDS MfeM64YM_0580 NC_014921.1 627669 627968 D hypothetical protein 627669..627968 Mycoplasma fermentans M64 10112891 YP_004136956.1 CDS MfeM64YM_0581 NC_014921.1 628100 628414 D hypothetical protein 628100..628414 Mycoplasma fermentans M64 10112892 YP_004136957.1 CDS marRP-1 NC_014921.1 628402 630084 D marrp 628402..630084 Mycoplasma fermentans M64 10112893 YP_004136958.1 CDS htpN-1 NC_014921.1 630065 631222 D htpn 630065..631222 Mycoplasma fermentans M64 10112894 YP_004136959.1 CDS htpT-1 NC_014921.1 631233 633071 D htpt 631233..633071 Mycoplasma fermentans M64 10112895 YP_004136960.1 CDS MfeM64YM_0585 NC_014921.1 633113 633643 D hypothetical protein 633113..633643 Mycoplasma fermentans M64 10112896 YP_004136961.1 CDS htpE-1 NC_014921.1 633656 634648 D htpe 633656..634648 Mycoplasma fermentans M64 10112897 YP_004136962.1 CDS htpA-1 NC_014921.1 634651 636066 D htpa 634651..636066 Mycoplasma fermentans M64 10112898 YP_004136963.1 CDS htpB-1 NC_014921.1 636083 637468 D htpb 636083..637468 Mycoplasma fermentans M64 10112899 YP_004136964.1 CDS MfeM64YM_0589 NC_014921.1 637468 637629 D hypothetical protein 637468..637629 Mycoplasma fermentans M64 10112900 YP_004136965.1 CDS MfeM64YM_0590 NC_014921.1 637652 637762 D hypothetical protein 637652..637762 Mycoplasma fermentans M64 10112901 YP_004136966.1 CDS mem-1 NC_014921.1 637762 638409 D mem 637762..638409 Mycoplasma fermentans M64 10112902 YP_004136967.1 CDS int-3 NC_014921.1 638469 639560 R int complement(638469..639560) Mycoplasma fermentans M64 10112903 YP_004136968.1 CDS MfeM64YM_0593 NC_014921.1 639797 640258 R hypothetical protein complement(639797..640258) Mycoplasma fermentans M64 10112904 YP_004136969.1 CDS MfeM64YM_0594 NC_014921.1 640280 640522 R chain length regulator (capsular polysaccharide biosynthesis) complement(640280..640522) Mycoplasma fermentans M64 10112905 YP_004136970.1 CDS exiS-2 NC_014921.1 640808 641272 D exis 640808..641272 Mycoplasma fermentans M64 10112906 YP_004136971.1 CDS hsdS-3 NC_014921.1 641208 642185 R KEGG Orthology: K01154; pfam01420, Methylase_S, Type I restriction modification DNA specificity domain. This domain is also known as the target recognition domain (TRD). Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity subunit (this family), two modification (M) subunits and two restriction (R) subunits.; type i restriction-modification system, s subunit complement(641208..642185) Mycoplasma fermentans M64 10112907 YP_004136972.1 CDS hsdM NC_014921.1 642175 643677 R Functional Classification (COG): Defense mechanisms; KEGG Orthology: K03427; type i restriction-modification system, m subunit complement(642175..643677) Mycoplasma fermentans M64 10112908 YP_004136973.1 CDS hsdR NC_014921.1 643696 646083 R Functional Classification (COG): Defense mechanisms; KEGG Orthology: K01153; type i restriction-modification system, r subunit complement(643696..646083) Mycoplasma fermentans M64 10112909 YP_004136974.1 CDS fic-1 NC_014921.1 646384 646920 D Functional Classification (COG): Cell division and chromosome partitioning; KEGG Orthology: K04095; cell filamentation protein fic-related protein 646384..646920 Mycoplasma fermentans M64 10112910 YP_004136975.1 CDS MfeM64YM_0600 NC_014921.1 646987 648195 R hypothetical protein complement(646987..648195) Mycoplasma fermentans M64 10112911 YP_004136976.1 CDS MfeM64YM_0601 NC_014921.1 648325 649125 D Functional Classification (COG): Transcription; transcriptional regulator, rpir family protein 648325..649125 Mycoplasma fermentans M64 10112912 YP_004136977.1 CDS MfeM64YM_0602 NC_014921.1 649126 649209 R hypothetical protein complement(649126..649209) Mycoplasma fermentans M64 10112913 YP_004136978.1 CDS MfeM64YM_0603 NC_014921.1 649279 649782 D hypothetical protein 649279..649782 Mycoplasma fermentans M64 10112914 YP_004136979.1 CDS kduI NC_014921.1 649792 650631 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K01815; 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase 649792..650631 Mycoplasma fermentans M64 10112915 YP_004136980.1 CDS ugl NC_014921.1 650631 651833 D Functional Classification (COG): General function prediction only; glucuronyl hydrolase 650631..651833 Mycoplasma fermentans M64 10112916 YP_004136981.1 CDS MfeM64YM_0606 NC_014921.1 651846 652325 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K02745; PTS system, iib component 651846..652325 Mycoplasma fermentans M64 10112917 YP_004136982.1 CDS MfeM64YM_0607 NC_014921.1 652336 653211 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K02746; PTS system, iic component 652336..653211 Mycoplasma fermentans M64 10112918 YP_004136983.1 CDS MfeM64YM_0608 NC_014921.1 653201 654064 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K02747; PTS system, iid component 653201..654064 Mycoplasma fermentans M64 10112919 YP_004136984.1 CDS MfeM64YM_0609 NC_014921.1 654064 654471 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K02744; PTS system, iia component 654064..654471 Mycoplasma fermentans M64 10112920 YP_004136985.1 CDS MfeM64YM_0610 NC_014921.1 654474 654809 D hypothetical protein 654474..654809 Mycoplasma fermentans M64 10112921 YP_004136986.1 CDS kduD NC_014921.1 654822 655595 D Functional Classification (COG): Secondary metabolites biosynthesis, transport, and catabolism/General function prediction only; KEGG Orthology: K00065; 2-deoxy-d-gluconate 3-dehydrogenase 654822..655595 Mycoplasma fermentans M64 10112922 YP_004136987.1 CDS MfeM64YM_0612 NC_014921.1 655586 656194 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K01625; 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 655586..656194 Mycoplasma fermentans M64 10112923 YP_004136988.1 CDS MfeM64YM_0613 NC_014921.1 656187 657176 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K00874; 2-dehydro-3-deoxygluconokinase 656187..657176 Mycoplasma fermentans M64 10112924 YP_004136989.1 CDS MfeM64YM_0614 NC_014921.1 657179 660652 D KEGG Orthology: K01727; cd01083, GAG_Lyase, Glycosaminoglycan (GAG) polysaccharide lyase family. This family consists of a group of secreted bacterial lyase enzymes capable of acting on glycosaminoglycans, such as hyaluronan and chondroitin, in the extracellular matrix of host tissues, contributing to the invasive capacity of the pathogen. These are broad-specificity glycosaminoglycan lyases which recognize uronyl residues in polysaccharides and cleave their glycosidic bonds via a beta-elimination reaction to form a double bond between C-4 and C-5 of the non-reducing terminal uronyl residues of released products. Substrates include chondroitin, chondroitin 4-sulfate, chondroitin 6-sulfate, and hyaluronic acid. Family members include chondroitin AC lyase, chondroitin abc lyase, xanthan lyase, and hyalurate lyase.; hypothetical protein 657179..660652 Mycoplasma fermentans M64 10112925 YP_004136990.1 CDS MfeM64YM_0615 NC_014921.1 660663 661286 D hypothetical protein 660663..661286 Mycoplasma fermentans M64 10112926 YP_004136991.1 CDS MfeM64YM_0616 NC_014921.1 661301 663076 D hypothetical protein 661301..663076 Mycoplasma fermentans M64 10112927 YP_004136992.1 CDS pncB NC_014921.1 663563 664585 D Functional Classification (COG): Coenzyme metabolism; KEGG Orthology: K00763; nicotinate phosphoribosyltransferase 663563..664585 Mycoplasma fermentans M64 10112928 YP_004136993.1 CDS MfeM64YM_0618 NC_014921.1 664714 665130 D hypothetical protein 664714..665130 Mycoplasma fermentans M64 10112929 YP_004136994.1 CDS efp NC_014921.1 665240 665800 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02356; elongation factor p 665240..665800 Mycoplasma fermentans M64 10112930 YP_004136995.1 CDS MfeM64YM_0620 NC_014921.1 665803 666105 D hypothetical protein 665803..666105 Mycoplasma fermentans M64 10112931 YP_004136996.1 CDS lemA NC_014921.1 666210 666893 R Functional Classification (COG): Function unknown; KEGG Orthology: K03744; lema protein complement(666210..666893) Mycoplasma fermentans M64 10112932 YP_004136997.1 CDS fmt NC_014921.1 666979 667815 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K00604; methionyl-tRNA formyltransferase complement(666979..667815) Mycoplasma fermentans M64 10112933 YP_004136998.1 CDS MfeM64YM_0623 NC_014921.1 667868 668494 R hypothetical protein complement(667868..668494) Mycoplasma fermentans M64 10112934 YP_004136999.1 CDS MfeM64YM_0624 NC_014921.1 668643 669536 R hypothetical protein complement(668643..669536) Mycoplasma fermentans M64 10112935 YP_004137000.1 CDS MfeM64YM_0625 NC_014921.1 669764 672739 R Functional Classification (COG): Cell division and chromosome partitioning; KEGG Orthology: K03529; p115-like abc transporter ATP-binding protein complement(669764..672739) Mycoplasma fermentans M64 10112936 YP_004137001.1 CDS rnc NC_014921.1 672837 673547 R Functional Classification (COG): Transcription; KEGG Orthology: K03685; ribonuclease iii complement(672837..673547) Mycoplasma fermentans M64 10112937 YP_004137002.1 CDS plsX NC_014921.1 673566 674561 R Functional Classification (COG): Lipid metabolism; KEGG Orthology: K03621; fatty acid/phospholipid synthesis protein plsx complement(673566..674561) Mycoplasma fermentans M64 10112938 YP_004137003.1 CDS MfeM64YM_0628 NC_014921.1 674575 676200 R Functional Classification (COG): General function prediction only; KEGG Orthology: K07030; glycerone kinase complement(674575..676200) Mycoplasma fermentans M64 10112939 YP_004137004.1 CDS MfeM64YM_0629 NC_014921.1 676193 676483 R hypothetical protein complement(676193..676483) Mycoplasma fermentans M64 10112940 YP_004137005.1 CDS recO NC_014921.1 676617 677297 D Functional Classification (COG): DNA replication, recombination, and repair; DNA repair protein reco 676617..677297 Mycoplasma fermentans M64 10112941 YP_004137006.1 CDS MfeM64YM_0631 NC_014921.1 677480 678196 D Functional Classification (COG): Energy production and conversion; nadph flavin oxidoreductase 677480..678196 Mycoplasma fermentans M64 10112942 YP_004137007.1 CDS deoB NC_014921.1 678265 679452 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K01839; phosphopentomutase 678265..679452 Mycoplasma fermentans M64 10112943 YP_004137008.1 CDS whiA NC_014921.1 679540 680379 D Functional Classification (COG): Function unknown; KEGG Orthology: K09762; hp protein 679540..680379 Mycoplasma fermentans M64 10112944 YP_004137009.1 CDS MfeM64YM_0634 NC_014921.1 680379 680720 D hypothetical protein 680379..680720 Mycoplasma fermentans M64 10112945 YP_004137010.1 CDS holA NC_014921.1 680929 681894 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K02340; DNA polymerase iii delta subunit 680929..681894 Mycoplasma fermentans M64 10112946 YP_004137011.1 CDS MfeM64YM_0636 NC_014921.1 682086 682376 D transcriptional regulator 682086..682376 Mycoplasma fermentans M64 10112947 YP_004137012.1 CDS MfeM64YM_0637 NC_014921.1 683008 683130 D hypothetical protein 683008..683130 Mycoplasma fermentans M64 10112948 YP_004137013.1 CDS MfeM64YM_0638 NC_014921.1 683237 683587 D transcriptional regulator 683237..683587 Mycoplasma fermentans M64 10112949 YP_004137014.1 CDS ychF NC_014921.1 683739 684839 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K06942; gtp-binding protein ychf 683739..684839 Mycoplasma fermentans M64 10112950 YP_004137015.1 CDS MfeM64YM_0640 NC_014921.1 685039 685602 D hypothetical protein 685039..685602 Mycoplasma fermentans M64 10112952 YP_004137016.1 CDS mgtA-1 NC_014921.1 685680 688382 R Functional Classification (COG): Inorganic ion transport and metabolism; KEGG Orthology: K01529; cation-transporting p-type atpase complement(685680..688382) Mycoplasma fermentans M64 10112953 YP_004137017.1 CDS MfeM64YM_0642 NC_014921.1 688460 688657 R hypothetical protein complement(688460..688657) Mycoplasma fermentans M64 10112954 YP_004137018.1 CDS mnuA NC_014921.1 688978 690921 R putative membrane nuclease a complement(688978..690921) Mycoplasma fermentans M64 10112956 YP_004137019.1 CDS MfeM64YM_0644 NC_014921.1 691134 691271 R hypothetical protein complement(691134..691271) Mycoplasma fermentans M64 10112957 YP_004137020.1 CDS gtaB NC_014921.1 691440 692348 R Functional Classification (COG): Cell envelope biogenesis, outer membrane; KEGG Orthology: K00963; utp-glucose-1-phosphate uridyltransferase complement(691440..692348) Mycoplasma fermentans M64 10112958 YP_004137021.1 CDS MfeM64YM_0646 NC_014921.1 692747 692926 R hypothetical protein complement(692747..692926) Mycoplasma fermentans M64 10112960 YP_004137022.1 CDS MfeM64YM_0647 NC_014921.1 693166 693384 R hypothetical protein complement(693166..693384) Mycoplasma fermentans M64 10112961 YP_004137023.1 CDS MfeM64YM_0648 NC_014921.1 694575 695648 D Functional Classification (COG): General function prediction only; KEGG Orthology: K07024; pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase. This family contains haloacid dehalogenase-like hydrolase enzymes.; hypothetical protein 694575..695648 Mycoplasma fermentans M64 10112970 YP_004137024.1 CDS rplO NC_014921.1 700841 701281 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02876; 50S ribosomal protein L15 complement(700841..701281) Mycoplasma fermentans M64 10112973 YP_004137025.1 CDS rpsE NC_014921.1 701336 702046 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02988; 30S ribosomal protein s5 complement(701336..702046) Mycoplasma fermentans M64 10112974 YP_004137026.1 CDS rplR NC_014921.1 702049 702414 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02881; 50S ribosomal protein L18 complement(702049..702414) Mycoplasma fermentans M64 10112975 YP_004137027.1 CDS rplF NC_014921.1 702441 702980 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02933; 50S ribosomal protein L6 complement(702441..702980) Mycoplasma fermentans M64 10112976 YP_004137028.1 CDS rpsH NC_014921.1 702992 703387 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02994; 30S ribosomal protein S8 complement(702992..703387) Mycoplasma fermentans M64 10112977 YP_004137029.1 CDS rpsZ NC_014921.1 703390 703575 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02954; 30S ribosomal protein s14 type z complement(703390..703575) Mycoplasma fermentans M64 10112978 YP_004137030.1 CDS rplE NC_014921.1 703577 704122 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02931; 50S ribosomal protein L5 complement(703577..704122) Mycoplasma fermentans M64 10112979 YP_004137031.1 CDS rplX NC_014921.1 704125 704451 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02895; 50S ribosomal protein l24 complement(704125..704451) Mycoplasma fermentans M64 10112980 YP_004137032.1 CDS rplN NC_014921.1 704473 704841 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02874; 50S ribosomal protein L14 complement(704473..704841) Mycoplasma fermentans M64 10112981 YP_004137033.1 CDS rpsQ NC_014921.1 704841 705107 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02961; 30S ribosomal protein S17 complement(704841..705107) Mycoplasma fermentans M64 10112982 YP_004137034.1 CDS rpmC NC_014921.1 705107 705310 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02904; 50S ribosomal protein l29 complement(705107..705310) Mycoplasma fermentans M64 10112983 YP_004137035.1 CDS rplP NC_014921.1 705310 705735 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02878; 50S ribosomal protein L16 complement(705310..705735) Mycoplasma fermentans M64 10112984 YP_004137036.1 CDS rpsC NC_014921.1 705713 706387 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02982; 30S ribosomal protein S3 complement(705713..706387) Mycoplasma fermentans M64 10112985 YP_004137037.1 CDS rplV NC_014921.1 706394 706753 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02890; 50S ribosomal protein L22 complement(706394..706753) Mycoplasma fermentans M64 10112986 YP_004137038.1 CDS rpsS NC_014921.1 706756 707031 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02965; 30S ribosomal protein s19 complement(706756..707031) Mycoplasma fermentans M64 10112987 YP_004137039.1 CDS rplB NC_014921.1 707031 707876 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02886; 50S ribosomal protein l2 complement(707031..707876) Mycoplasma fermentans M64 10112988 YP_004137040.1 CDS rplW NC_014921.1 707948 708460 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02892; putative 50S ribosomal protein l23 complement(707948..708460) Mycoplasma fermentans M64 10112989 YP_004137041.1 CDS rplD NC_014921.1 708460 709593 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02926; putative 50S ribosomal protein l4 complement(708460..709593) Mycoplasma fermentans M64 10112990 YP_004137042.1 CDS rplC NC_014921.1 709593 710420 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02906; 50S ribosomal protein L3 complement(709593..710420) Mycoplasma fermentans M64 10112991 YP_004137043.1 CDS rpsJ NC_014921.1 710492 710797 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02946; 30S ribosomal protein s10 complement(710492..710797) Mycoplasma fermentans M64 10112992 YP_004137044.1 CDS MfeM64YM_0669 NC_014921.1 711427 714036 D hypothetical protein 711427..714036 Mycoplasma fermentans M64 10112993 YP_004137045.1 CDS MfeM64YM_0670 NC_014921.1 714137 714313 R hypothetical protein complement(714137..714313) Mycoplasma fermentans M64 10112994 YP_004137046.1 CDS MfeM64YM_0671 NC_014921.1 714313 714621 D hypothetical protein 714313..714621 Mycoplasma fermentans M64 10112995 YP_004137047.1 CDS MfeM64YM_0672 NC_014921.1 714642 714758 D hypothetical protein 714642..714758 Mycoplasma fermentans M64 10112996 YP_004137048.1 CDS recA NC_014921.1 714778 715797 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03553; protein reca 714778..715797 Mycoplasma fermentans M64 10112997 YP_004137049.1 CDS MfeM64YM_0674 NC_014921.1 715921 716187 R hypothetical protein complement(715921..716187) Mycoplasma fermentans M64 10112998 YP_004137050.1 CDS MfeM64YM_0675 NC_014921.1 716267 716494 R hypothetical protein complement(716267..716494) Mycoplasma fermentans M64 10112999 YP_004137051.1 CDS MfeM64YM_0676 NC_014921.1 716748 717566 D Functional Classification (COG): Function unknown; KEGG Orthology: K09769; COG1692, COG1692, Uncharacterized protein conserved in bacteria [Function unknown].; hypothetical protein 716748..717566 Mycoplasma fermentans M64 10113000 YP_004137052.1 CDS MfeM64YM_0677 NC_014921.1 717725 717910 D hypothetical protein 717725..717910 Mycoplasma fermentans M64 10113001 YP_004137053.1 CDS MfeM64YM_0678 NC_014921.1 718481 719566 R Functional Classification (COG): Carbohydrate transport and metabolism; aminopeptidase complement(718481..719566) Mycoplasma fermentans M64 10113002 YP_004137054.1 CDS MfeM64YM_0679 NC_014921.1 719889 720041 D hypothetical protein 719889..720041 Mycoplasma fermentans M64 10113003 YP_004137055.1 CDS mgtA-2 NC_014921.1 720352 723066 D Functional Classification (COG): Inorganic ion transport and metabolism; KEGG Orthology: K01531; cation-transporting p-atpase 720352..723066 Mycoplasma fermentans M64 10113004 YP_004137056.1 CDS MfeM64YM_0681 NC_014921.1 723365 723562 R hypothetical protein complement(723365..723562) Mycoplasma fermentans M64 10113005 YP_004137057.1 CDS MfeM64YM_0682 NC_014921.1 723566 724336 R Functional Classification (COG): General function prediction only; pfam01863, DUF45, Protein of unknown function DUF45. This protein has no known function. Members are found in some archaebacteria, as well as Helicobacter pylori. The proteins are 190-240 amino acids long, with the C terminus being the most conserved region, containing three conserved histidines. This motif is similar to that found in Zinc proteases, suggesting that this family may also be proteases.; hypothetical protein complement(723566..724336) Mycoplasma fermentans M64 10113006 YP_004137058.1 CDS MfeM64YM_0683 NC_014921.1 724317 724997 R pfam08378, NERD, Nuclease-related domain. The nuclease-related domain (NERD) is found in a range of bacterial as well as archaeal and plant proteins. It has distant similarity to endonucleases (hence its name) and its secondary structure is helix-sheet-sheet-sheet-sheet-weak sheet/long loop-helix-sheet-sheet. The majority of NERD-containing proteins are single-domain, but in several cases proteins containing NERD have additional domains which in 75% of cases are involved in DNA processing.; hypothetical protein complement(724317..724997) Mycoplasma fermentans M64 10113007 YP_004137059.1 CDS azoR NC_014921.1 725097 725687 D Functional Classification (COG): Lipid metabolism; KEGG Orthology: K01118; fmn-dependent NADH-azoreductase 725097..725687 Mycoplasma fermentans M64 10113008 YP_004137060.1 CDS nusB NC_014921.1 725764 726183 R Functional Classification (COG): Transcription; KEGG Orthology: K03625; transcription termination factor complement(725764..726183) Mycoplasma fermentans M64 10113009 YP_004137061.1 CDS MfeM64YM_0686 NC_014921.1 726257 726667 R hypothetical protein complement(726257..726667) Mycoplasma fermentans M64 10113010 YP_004137062.1 CDS gltX NC_014921.1 726658 728049 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01885; glutamyl-tRNA synthetase complement(726658..728049) Mycoplasma fermentans M64 10113011 YP_004137063.1 CDS MfeM64YM_0688 NC_014921.1 728336 729205 R hypothetical protein complement(728336..729205) Mycoplasma fermentans M64 10113012 YP_004137064.1 CDS MfeM64YM_0689 NC_014921.1 729249 729956 R cd06561, AlkD_like, A new structural DNA glycosylase. This domain represents a new and uncharacterized structural superfamily of DNA glycosylases that form an alpha-alpha superhelix fold that are not belong to the identified five structural DNA glycosylase superfamilies (UDG, AAG/MNPG, MutM/Fpg and helix-hairpin-helix). DNA glycosylases removing alkylated base residues have been identified in all organisms investigated and may be universally present in nature. DNA glycosylases catalyze the first step in Base Excision Repair (BER) pathway by cleaving damaged DNA bases within double strand DNA to produce an abasic site. The resulting abasic site is further processed by AP endonuclease, phosphodiesterase, DNA polymerases, and DNA ligase functions to restore the DNA to an undamaged state. All glycosylase examined to date utilize a similar strategy for binding DNA and base flipping despite their structural diversity.; hypothetical protein complement(729249..729956) Mycoplasma fermentans M64 10113013 YP_004137065.1 CDS fruA-2 NC_014921.1 730291 731676 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K02770; PTS system, fructose-specific enzyme ii, bc component complement(730291..731676) Mycoplasma fermentans M64 10113014 YP_004137066.1 CDS MfeM64YM_0691 NC_014921.1 731695 732315 R Functional Classification (COG): Carbohydrate transport and metabolism/Signal transduction mechanisms; KEGG Orthology: K02806; PTS system protein complement(731695..732315) Mycoplasma fermentans M64 10113015 YP_004137067.1 CDS fruK NC_014921.1 732306 733226 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K00882; fructose-1-phosphate kinase complement(732306..733226) Mycoplasma fermentans M64 10113016 YP_004137068.1 CDS MfeM64YM_0693 NC_014921.1 733369 734112 R Functional Classification (COG): Transcription/Carbohydrate transport and metabolism; KEGG Orthology: K03436; fructose repressor complement(733369..734112) Mycoplasma fermentans M64 10113017 YP_004137069.1 CDS MfeM64YM_0694 NC_014921.1 734174 734308 R hypothetical protein complement(734174..734308) Mycoplasma fermentans M64 10113018 YP_004137070.1 CDS aspS-2 NC_014921.1 734342 736051 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01876; aspartyl-tRNA synthetase complement(734342..736051) Mycoplasma fermentans M64 10113019 YP_004137071.1 CDS hisS NC_014921.1 736055 737368 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01892; histidyl-tRNA synthetase complement(736055..737368) Mycoplasma fermentans M64 10113020 YP_004137072.1 CDS potE-2 NC_014921.1 737534 739264 D amino acid permease 737534..739264 Mycoplasma fermentans M64 10113021 YP_004137073.1 CDS MfeM64YM_0698 NC_014921.1 739326 740549 R Functional Classification (COG): Defense mechanisms; KEGG Orthology: K01154; pfam01420, Methylase_S, Type I restriction modification DNA specificity domain. This domain is also known as the target recognition domain (TRD). Restriction-modification (R-M) systems protect a bacterial cell against invasion of foreign DNA by endonucleolytic cleavage of DNA that lacks a site specific modification. The host genome is protected from cleavage by methylation of specific nucleotides in the target sites. In type I systems, both restriction and modification activities are present in one heteromeric enzyme complex composed of one DNA specificity subunit (this family), two modification (M) subunits and two restriction (R) subunits.; hypothetical protein complement(739326..740549) Mycoplasma fermentans M64 10113022 YP_004137074.1 CDS MfeM64YM_0699 NC_014921.1 740583 741983 R Functional Classification (COG): Transcription; putative transcriptional regulator complement(740583..741983) Mycoplasma fermentans M64 10113023 YP_004137075.1 CDS MfeM64YM_0700 NC_014921.1 742131 743969 R Functional Classification (COG): Defense mechanisms; KEGG Orthology: K06147; abc transporter, ATP-binding protein complement(742131..743969) Mycoplasma fermentans M64 10113024 YP_004137076.1 CDS MfeM64YM_0701 NC_014921.1 743986 745767 R Functional Classification (COG): Defense mechanisms; abc transporter, ATP-binding protein complement(743986..745767) Mycoplasma fermentans M64 10113025 YP_004137077.1 CDS MfeM64YM_0702 NC_014921.1 745909 746343 D Functional Classification (COG): Nucleotide transport and metabolism; nudix family hydrolase 745909..746343 Mycoplasma fermentans M64 10113026 YP_004137078.1 CDS pgmB NC_014921.1 746396 747061 R Functional Classification (COG): General function prediction only; KEGG Orthology: K01838; beta-phosphoglucomutase complement(746396..747061) Mycoplasma fermentans M64 10113027 YP_004137079.1 CDS MfeM64YM_0704 NC_014921.1 747054 749423 R Functional Classification (COG): Carbohydrate transport and metabolism; trehalose/maltose hydrolase, phosphorylase complement(747054..749423) Mycoplasma fermentans M64 10113028 YP_004137080.1 CDS malL NC_014921.1 749433 751076 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K01182; oligo-1,6-glucosidase complement(749433..751076) Mycoplasma fermentans M64 10113029 YP_004137081.1 CDS pulA NC_014921.1 751084 753117 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K01200; pullulanase complement(751084..753117) Mycoplasma fermentans M64 10113030 YP_004137082.1 CDS MfeM64YM_0707 NC_014921.1 753263 753928 R Functional Classification (COG): Transcription; COG2188, PhnF, Transcriptional regulators [Transcription].; hypothetical protein complement(753263..753928) Mycoplasma fermentans M64 10113031 YP_004137083.1 CDS amyC-1 NC_014921.1 753972 755807 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K01176; alpha-amylase 3 complement(753972..755807) Mycoplasma fermentans M64 10113032 YP_004137084.1 CDS MfeM64YM_0709 NC_014921.1 755836 756498 R hypothetical protein complement(755836..756498) Mycoplasma fermentans M64 10113033 YP_004137085.1 CDS malK NC_014921.1 756498 757718 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K10112; maltodextrin abc transporter ATP-binding protein complement(756498..757718) Mycoplasma fermentans M64 10113034 YP_004137086.1 CDS malD NC_014921.1 757722 758672 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K10110; maltodextrin transport system permease protein mald complement(757722..758672) Mycoplasma fermentans M64 10113035 YP_004137087.1 CDS MfeM64YM_0712 NC_014921.1 758675 761785 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K10109; COG1175, UgpA, ABC-type sugar transport systems, permease components [Carbohydrate transport and metabolism].; hypothetical protein complement(758675..761785) Mycoplasma fermentans M64 10113036 YP_004137088.1 CDS MfeM64YM_0713 NC_014921.1 761773 762294 R hypothetical protein complement(761773..762294) Mycoplasma fermentans M64 10113037 YP_004137089.1 CDS MfeM64YM_0714 NC_014921.1 762294 764669 R lipoprotein complement(762294..764669) Mycoplasma fermentans M64 10113038 YP_004137090.1 CDS MfeM64YM_0715 NC_014921.1 764690 765151 R hypothetical protein complement(764690..765151) Mycoplasma fermentans M64 10113039 YP_004137091.1 CDS MfeM64YM_0716 NC_014921.1 765387 765788 R hypothetical protein complement(765387..765788) Mycoplasma fermentans M64 10113040 YP_004137092.1 CDS amyC-2 NC_014921.1 765833 767119 R Functional Classification (COG): Carbohydrate transport and metabolism; alpha-amylase complement(765833..767119) Mycoplasma fermentans M64 10113041 YP_004137093.1 CDS MfeM64YM_0718 NC_014921.1 767161 767262 R hypothetical protein complement(767161..767262) Mycoplasma fermentans M64 10113042 YP_004137094.1 CDS MfeM64YM_0719 NC_014921.1 768052 768984 R hypothetical protein complement(768052..768984) Mycoplasma fermentans M64 10113043 YP_004137095.1 CDS manB-2 NC_014921.1 768997 770589 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K01840; phosphomannomutase 768997..770589 Mycoplasma fermentans M64 10113044 YP_004137096.1 CDS MfeM64YM_0721 NC_014921.1 770686 771957 R Functional Classification (COG): Function unknown; abc transporter permease protein complement(770686..771957) Mycoplasma fermentans M64 10113045 YP_004137097.1 CDS rplU NC_014921.1 772102 772401 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02888; 50S ribosomal protein l21 772102..772401 Mycoplasma fermentans M64 10113046 YP_004137098.1 CDS rpmA NC_014921.1 772411 772809 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02899; putative 50S ribosomal protein l27 772411..772809 Mycoplasma fermentans M64 10113047 YP_004137099.1 CDS MfeM64YM_0724 NC_014921.1 772900 773514 R hypothetical protein complement(772900..773514) Mycoplasma fermentans M64 10113048 YP_004137100.1 CDS adhT NC_014921.1 773634 774701 R Functional Classification (COG): General function prediction only; KEGG Orthology: K00001; alcohol dehydrogenase complement(773634..774701) Mycoplasma fermentans M64 10113049 YP_004137101.1 CDS MfeM64YM_0726 NC_014921.1 774888 775319 D hypothetical protein 774888..775319 Mycoplasma fermentans M64 10113050 YP_004137102.1 CDS smf-4 NC_014921.1 776319 777050 D Functional Classification (COG): DNA replication, recombination, and repair/Intracellular trafficking and secretion; KEGG Orthology: K04096; DNA processing protein smf 776319..777050 Mycoplasma fermentans M64 10113052 YP_004137103.1 CDS MfeM64YM_0729 NC_014921.1 777047 777895 R Functional Classification (COG): General function prediction only; KEGG Orthology: K07024; hydrolase of the had family complement(777047..777895) Mycoplasma fermentans M64 10113053 YP_004137104.1 CDS cbiQ NC_014921.1 778095 778961 R Functional Classification (COG): Inorganic ion transport and metabolism; KEGG Orthology: K02008; cobalt abc transporter, permease protein complement(778095..778961) Mycoplasma fermentans M64 10113054 YP_004137105.1 CDS cbiO2 NC_014921.1 778961 779872 R Functional Classification (COG): Inorganic ion transport and metabolism; KEGG Orthology: K02006; cobalt import ATP-binding protein cbio 2 complement(778961..779872) Mycoplasma fermentans M64 10113055 YP_004137106.1 CDS cbiO1 NC_014921.1 779863 780660 R Functional Classification (COG): Inorganic ion transport and metabolism; KEGG Orthology: K02006; cobalt import ATP-binding protein cbio 1 complement(779863..780660) Mycoplasma fermentans M64 10113056 YP_004137107.1 CDS MfeM64YM_0733 NC_014921.1 780680 780820 D hypothetical protein 780680..780820 Mycoplasma fermentans M64 10113057 YP_004137108.1 CDS rplQ NC_014921.1 781008 781481 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02879; 50S ribosomal protein l17 complement(781008..781481) Mycoplasma fermentans M64 10113058 YP_004137109.1 CDS rpoA NC_014921.1 781481 782494 R Functional Classification (COG): Transcription; KEGG Orthology: K03040; DNA-directed RNA polymerase subunit alpha complement(781481..782494) Mycoplasma fermentans M64 10113059 YP_004137110.1 CDS rpsK NC_014921.1 782513 782899 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02948; 30S ribosomal protein S11 complement(782513..782899) Mycoplasma fermentans M64 10113060 YP_004137111.1 CDS rpsM NC_014921.1 782922 783293 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02952; 30S ribosomal protein S13 complement(782922..783293) Mycoplasma fermentans M64 10113061 YP_004137112.1 CDS rpmJ NC_014921.1 783304 783417 R 50S ribosomal protein l36 complement(783304..783417) Mycoplasma fermentans M64 10113062 YP_004137113.1 CDS infA NC_014921.1 783435 783650 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02518; translation initiation factor if-1 complement(783435..783650) Mycoplasma fermentans M64 10113063 YP_004137114.1 CDS map NC_014921.1 783651 784400 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01265; methionine aminopeptidase complement(783651..784400) Mycoplasma fermentans M64 10113064 YP_004137115.1 CDS adk NC_014921.1 784428 785090 R Functional Classification (COG): Nucleotide transport and metabolism; KEGG Orthology: K00939; adenylate kinase complement(784428..785090) Mycoplasma fermentans M64 10113065 YP_004137116.1 CDS secY NC_014921.1 785084 786583 R Functional Classification (COG): Intracellular trafficking and secretion; KEGG Orthology: K03076; preprotein translocase secy subunit complement(785084..786583) Mycoplasma fermentans M64 10113066 YP_004137117.1 CDS MfeM64YM_0743 NC_014921.1 791677 791769 D hypothetical protein 791677..791769 Mycoplasma fermentans M64 10113069 YP_004137118.1 CDS thiI NC_014921.1 791856 792989 R Functional Classification (COG): Coenzyme metabolism; KEGG Orthology: K03151; thiamine biosynthesis protein thii complement(791856..792989) Mycoplasma fermentans M64 10113070 YP_004137119.1 CDS MfeM64YM_0745 NC_014921.1 792979 794580 R hypothetical protein complement(792979..794580) Mycoplasma fermentans M64 10113071 YP_004137120.1 CDS rpmF NC_014921.1 794684 794884 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02911; 50S ribosomal protein l32 complement(794684..794884) Mycoplasma fermentans M64 10113072 YP_004137121.1 CDS MfeM64YM_0747 NC_014921.1 795047 797401 R hypothetical protein complement(795047..797401) Mycoplasma fermentans M64 10113073 YP_004137122.1 CDS oppC2 NC_014921.1 797410 798558 R Functional Classification (COG): Amino acid transport and metabolism/Inorganic ion transport and metabolism; oligopeptide transport system permease protein complement(797410..798558) Mycoplasma fermentans M64 10113074 YP_004137123.1 CDS oppB-3 NC_014921.1 798548 799513 R Functional Classification (COG): Amino acid transport and metabolism/Inorganic ion transport and metabolism; oligopeptide abc transporter permease protein complement(798548..799513) Mycoplasma fermentans M64 10113075 YP_004137124.1 CDS ptsH NC_014921.1 799567 799836 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K11189; phosphocarrier protein hpr complement(799567..799836) Mycoplasma fermentans M64 10113076 YP_004137125.1 CDS bcrA-2 NC_014921.1 800039 800959 R Functional Classification (COG): Defense mechanisms; KEGG Orthology: K01990; abc transporter ATP-binding protein complement(800039..800959) Mycoplasma fermentans M64 10113077 YP_004137126.1 CDS MfeM64YM_0752 NC_014921.1 800969 802774 R hypothetical protein complement(800969..802774) Mycoplasma fermentans M64 10113078 YP_004137127.1 CDS rpsO NC_014921.1 802911 803177 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02956; 30S ribosomal protein S15 complement(802911..803177) Mycoplasma fermentans M64 10113079 YP_004137128.1 CDS rpsL NC_014921.1 803499 803918 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02950; 30S ribosomal protein S12 803499..803918 Mycoplasma fermentans M64 10113080 YP_004137129.1 CDS rpsG NC_014921.1 803944 804414 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02992; 30S ribosomal protein S7 803944..804414 Mycoplasma fermentans M64 10113081 YP_004137130.1 CDS fusA NC_014921.1 804426 806516 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02355; elongation factor g 804426..806516 Mycoplasma fermentans M64 10113082 YP_004137131.1 CDS MfeM64YM_0757 NC_014921.1 806684 806974 D aaa+ superfamily atpase 806684..806974 Mycoplasma fermentans M64 10113083 YP_004137132.1 CDS MfeM64YM_0758 NC_014921.1 807015 807260 D hypothetical protein 807015..807260 Mycoplasma fermentans M64 10113084 YP_004137133.1 CDS MfeM64YM_0759 NC_014921.1 807411 807947 D aaa+ superfamily atpase 807411..807947 Mycoplasma fermentans M64 10113085 YP_004137134.1 CDS MfeM64YM_0760 NC_014921.1 807993 808679 R hypothetical protein complement(807993..808679) Mycoplasma fermentans M64 10113086 YP_004137135.1 CDS metK NC_014921.1 808948 810087 D Functional Classification (COG): Coenzyme metabolism; KEGG Orthology: K00789; s-adenosylmethionine synthetase 808948..810087 Mycoplasma fermentans M64 10113087 YP_004137136.1 CDS MfeM64YM_0762 NC_014921.1 810166 810282 D hypothetical protein 810166..810282 Mycoplasma fermentans M64 10113088 YP_004137137.1 CDS MfeM64YM_0763 NC_014921.1 810380 810559 D hypothetical protein 810380..810559 Mycoplasma fermentans M64 10113089 YP_004137138.1 CDS rplL NC_014921.1 810592 810963 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02935; 50S ribosomal protein l7/l12 complement(810592..810963) Mycoplasma fermentans M64 10113090 YP_004137139.1 CDS rplJ NC_014921.1 810985 811494 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02864; 50S ribosomal protein l10 complement(810985..811494) Mycoplasma fermentans M64 10113091 YP_004137140.1 CDS MfeM64YM_0766 NC_014921.1 811666 811731 R hypothetical protein complement(811666..811731) Mycoplasma fermentans M64 10113092 YP_004137141.1 CDS hlyC NC_014921.1 811718 813010 R Functional Classification (COG): General function prediction only; hemolysin c complement(811718..813010) Mycoplasma fermentans M64 10113093 YP_004137142.1 CDS dnaB NC_014921.1 813013 814437 R Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K02314; replicative DNA helicase complement(813013..814437) Mycoplasma fermentans M64 10113094 YP_004137143.1 CDS rplI NC_014921.1 814427 814882 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02939; 50S ribosomal protein l9 complement(814427..814882) Mycoplasma fermentans M64 10113095 YP_004137144.1 CDS MfeM64YM_0770 NC_014921.1 814863 816833 R Functional Classification (COG): Signal transduction mechanisms; dhh subfamily 1 protein complement(814863..816833) Mycoplasma fermentans M64 10113096 YP_004137145.1 CDS MfeM64YM_0771 NC_014921.1 816958 817056 R hypothetical protein complement(816958..817056) Mycoplasma fermentans M64 10113097 YP_004137146.1 CDS MfeM64YM_0772 NC_014921.1 817086 817985 R hypothetical protein complement(817086..817985) Mycoplasma fermentans M64 10113098 YP_004137147.1 CDS MfeM64YM_0774 NC_014921.1 818657 818821 R hypothetical protein complement(818657..818821) Mycoplasma fermentans M64 10113100 YP_004137148.1 CDS MfeM64YM_0775 NC_014921.1 818937 819071 R hypothetical protein complement(818937..819071) Mycoplasma fermentans M64 10113101 YP_004137149.1 CDS MfeM64YM_0776 NC_014921.1 819344 819511 D hypothetical protein 819344..819511 Mycoplasma fermentans M64 10113102 YP_004137150.1 CDS MfeM64YM_0777 NC_014921.1 819535 819645 D hypothetical protein 819535..819645 Mycoplasma fermentans M64 10113103 YP_004137151.1 CDS MfeM64YM_0778 NC_014921.1 819702 820541 D Functional Classification (COG): General function prediction only; cof family had hydrolase protein 819702..820541 Mycoplasma fermentans M64 10113104 YP_004137152.1 CDS nfo NC_014921.1 820534 821373 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K01151; endonuclease 4 820534..821373 Mycoplasma fermentans M64 10113105 YP_004137153.1 CDS MfeM64YM_0780 NC_014921.1 821514 821597 R hypothetical protein complement(821514..821597) Mycoplasma fermentans M64 10113106 YP_004137154.1 CDS MfeM64YM_0781 NC_014921.1 821939 824005 D Functional Classification (COG): Lipid metabolism; COG1835, COG1835, acyltransferases [Lipid metabolism].; hypothetical protein 821939..824005 Mycoplasma fermentans M64 10113107 YP_004137155.1 CDS trxA NC_014921.1 824014 824355 D thioredoxin 824014..824355 Mycoplasma fermentans M64 10113108 YP_004137156.1 CDS uvrC NC_014921.1 824359 826083 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03703; uvrabc system protein c 824359..826083 Mycoplasma fermentans M64 10113109 YP_004137157.1 CDS MfeM64YM_0785 NC_014921.1 827165 827332 D hypothetical protein 827165..827332 Mycoplasma fermentans M64 10113111 YP_004137158.1 CDS MfeM64YM_0786 NC_014921.1 827402 827908 R hypothetical protein complement(827402..827908) Mycoplasma fermentans M64 10113112 YP_004137159.1 CDS MfeM64YM_0787 NC_014921.1 828030 829289 R Functional Classification (COG): General function prediction only; KEGG Orthology: K07133; aaa+ superfamily atpase complement(828030..829289) Mycoplasma fermentans M64 10113113 YP_004137160.1 CDS MfeM64YM_0788 NC_014921.1 829538 829957 R hypothetical protein complement(829538..829957) Mycoplasma fermentans M64 10113114 YP_004137161.1 CDS fic-2 NC_014921.1 830334 831380 R Functional Classification (COG): Function unknown; filamentation induced by camp protein fic complement(830334..831380) Mycoplasma fermentans M64 10113115 YP_004137162.1 CDS MfeM64YM_0790 NC_014921.1 831795 833216 R Functional Classification (COG): Transcription; transcriptional regulator complement(831795..833216) Mycoplasma fermentans M64 10113116 YP_004137163.1 CDS MfeM64YM_0791 NC_014921.1 833790 834509 D hypothetical protein 833790..834509 Mycoplasma fermentans M64 10113117 YP_004137164.1 CDS MfeM64YM_0792 NC_014921.1 834740 834931 D hypothetical protein 834740..834931 Mycoplasma fermentans M64 10113118 YP_004137165.1 CDS MfeM64YM_0793 NC_014921.1 834952 836154 D hypothetical protein 834952..836154 Mycoplasma fermentans M64 10113119 YP_004137166.1 CDS MfeM64YM_0794 NC_014921.1 836164 836631 D hypothetical protein 836164..836631 Mycoplasma fermentans M64 10113120 YP_004137167.1 CDS MfeM64YM_0795 NC_014921.1 836631 838850 D Functional Classification (COG): Intracellular trafficking and secretion; cd01126, TraG_VirD4, The TraG/TraD/VirD4 family are bacterial conjugation proteins involved in type IV secretion. These proteins aid the transfer of DNA from the plasmid into the host bacterial chromosome. They contain an ATP binding domain. VirD4 is involved in DNA transfer to plant cells and is required for virulence.; hypothetical protein 836631..838850 Mycoplasma fermentans M64 10113121 YP_004137168.1 CDS MfeM64YM_0796 NC_014921.1 838861 839049 D hypothetical protein 838861..839049 Mycoplasma fermentans M64 10113122 YP_004137169.1 CDS MfeM64YM_0797 NC_014921.1 839051 839998 D Functional Classification (COG): Function unknown; COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown].; hypothetical protein 839051..839998 Mycoplasma fermentans M64 10113123 YP_004137170.1 CDS MfeM64YM_0798 NC_014921.1 840007 840246 D hypothetical protein 840007..840246 Mycoplasma fermentans M64 10113124 YP_004137171.1 CDS MfeM64YM_0799 NC_014921.1 840259 840975 D hypothetical protein 840259..840975 Mycoplasma fermentans M64 10113125 YP_004137172.1 CDS MfeM64YM_0800 NC_014921.1 840985 841536 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03111; pfam00436, SSB, Single-strand binding protein family. This family includes single stranded binding proteins and also the primosomal replication protein N (PriB). PriB forms a complex with PriA, PriC and ssDNA.; hypothetical protein 840985..841536 Mycoplasma fermentans M64 10113126 YP_004137173.1 CDS MfeM64YM_0801 NC_014921.1 841536 841790 D hypothetical protein 841536..841790 Mycoplasma fermentans M64 10113127 YP_004137174.1 CDS MfeM64YM_0802 NC_014921.1 841814 843382 D hypothetical protein 841814..843382 Mycoplasma fermentans M64 10113128 YP_004137175.1 CDS MfeM64YM_0803 NC_014921.1 843497 843778 D hypothetical protein 843497..843778 Mycoplasma fermentans M64 10113129 YP_004137176.1 CDS MfeM64YM_0804 NC_014921.1 843778 844968 D hypothetical protein 843778..844968 Mycoplasma fermentans M64 10113130 YP_004137177.1 CDS trsE-6 NC_014921.1 844984 847797 D Functional Classification (COG): Intracellular trafficking and secretion; trse-like protein 844984..847797 Mycoplasma fermentans M64 10113131 YP_004137178.1 CDS MfeM64YM_0806 NC_014921.1 847778 848461 D hypothetical protein 847778..848461 Mycoplasma fermentans M64 10113132 YP_004137179.1 CDS MfeM64YM_0807 NC_014921.1 848507 852772 D hypothetical protein 848507..852772 Mycoplasma fermentans M64 10113133 YP_004137180.1 CDS MfeM64YM_0808 NC_014921.1 853000 853128 D hypothetical protein 853000..853128 Mycoplasma fermentans M64 10113134 YP_004137181.1 CDS MfeM64YM_0809 NC_014921.1 853362 854288 D hypothetical protein 853362..854288 Mycoplasma fermentans M64 10113135 YP_004137182.1 CDS MfeM64YM_0810 NC_014921.1 854336 855502 D hypothetical protein 854336..855502 Mycoplasma fermentans M64 10113136 YP_004137183.1 CDS MfeM64YM_0811 NC_014921.1 856082 856264 R hypothetical protein complement(856082..856264) Mycoplasma fermentans M64 10113137 YP_004137184.1 CDS fic-3 NC_014921.1 856834 857961 R Functional Classification (COG): Function unknown; fic family protein complement(856834..857961) Mycoplasma fermentans M64 10113138 YP_004137185.1 CDS MfeM64YM_0813 NC_014921.1 858078 858230 R hypothetical protein complement(858078..858230) Mycoplasma fermentans M64 10113139 YP_004137186.1 CDS MfeM64YM_0814 NC_014921.1 858762 859091 D hypothetical protein 858762..859091 Mycoplasma fermentans M64 10113140 YP_004137187.1 CDS tex NC_014921.1 859428 861584 R Functional Classification (COG): Transcription; KEGG Orthology: K06959; putative RNA binding protein complement(859428..861584) Mycoplasma fermentans M64 10113141 YP_004137188.1 CDS pyrG NC_014921.1 861889 863499 D Functional Classification (COG): Nucleotide transport and metabolism; KEGG Orthology: K01937; ctp synthase 861889..863499 Mycoplasma fermentans M64 10113142 YP_004137189.1 CDS ileS NC_014921.1 863511 866177 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01870; isoleucyl-tRNA synthetase 863511..866177 Mycoplasma fermentans M64 10113143 YP_004137190.1 CDS lspA NC_014921.1 866170 866904 D Functional Classification (COG): Cell envelope biogenesis, outer membrane/Intracellular trafficking and secretion; KEGG Orthology: K03101; lipoprotein signal peptidase 866170..866904 Mycoplasma fermentans M64 10113144 YP_004137191.1 CDS MfeM64YM_0819 NC_014921.1 867029 868363 D Functional Classification (COG): Transcription; putative transcriptional regulator 867029..868363 Mycoplasma fermentans M64 10113145 YP_004137192.1 CDS pip NC_014921.1 868385 869329 D Functional Classification (COG): General function prediction only; KEGG Orthology: K01259; proline iminopeptidase 868385..869329 Mycoplasma fermentans M64 10113146 YP_004137193.1 CDS MfeM64YM_0821 NC_014921.1 869338 869508 R hypothetical protein complement(869338..869508) Mycoplasma fermentans M64 10113147 YP_004137194.1 CDS MfeM64YM_0822 NC_014921.1 869726 870211 R hypothetical protein complement(869726..870211) Mycoplasma fermentans M64 10113148 YP_004137195.1 CDS MfeM64YM_0823 NC_014921.1 870339 871292 D pfam01541, GIY-YIG, GIY-YIG catalytic domain. This domain called GIY-YIG is found in the amino terminal region of excinuclease abc subunit c (uvrC), bacteriophage T4 endonucleases segA, segB, segC, segD and segE; it is also found in putative endonucleases encoded by group I introns of fungi and phage. The structure of I-TevI a GIY-YIG endonuclease, reveals a novel alpha/beta-fold with a central three-stranded antiparallel beta-sheet flanked by three helices. The most conserved and putative catalytic residues are located on a shallow, concave surface and include a metal coordination site.; hypothetical protein 870339..871292 Mycoplasma fermentans M64 10113149 YP_004137196.1 CDS MfeM64YM_0824 NC_014921.1 871358 872521 R Functional Classification (COG): Inorganic ion transport and metabolism; pfam03595, C4dic_mal_tran, C4-dicarboxylate transporter/malic acid transport protein.; hypothetical protein complement(871358..872521) Mycoplasma fermentans M64 10113150 YP_004137197.1 CDS MfeM64YM_0825 NC_014921.1 872549 875491 R pfam03235, DUF262, Protein of unknown function DUF262.; hypothetical protein complement(872549..875491) Mycoplasma fermentans M64 10113151 YP_004137198.1 CDS MfeM64YM_0826 NC_014921.1 875484 876734 R Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K00558; cytosine-specific methyltransferase complement(875484..876734) Mycoplasma fermentans M64 10113152 YP_004137199.1 CDS pdhD NC_014921.1 877016 879226 R Functional Classification (COG): Energy production and conversion; KEGG Orthology: K00382; dihydrolipoamide dehydrogenase complement(877016..879226) Mycoplasma fermentans M64 10113153 YP_004137200.1 CDS pdhC NC_014921.1 879228 880178 R Functional Classification (COG): Energy production and conversion; KEGG Orthology: K00627; dihydrolipoamide acetyltransferase complement(879228..880178) Mycoplasma fermentans M64 10113154 YP_004137201.1 CDS pdhB NC_014921.1 880238 881239 R Functional Classification (COG): Energy production and conversion; KEGG Orthology: K00162; pyruvate dehydrogenase e1-beta subunit complement(880238..881239) Mycoplasma fermentans M64 10113155 YP_004137202.1 CDS pdhA NC_014921.1 881242 882351 R Functional Classification (COG): Energy production and conversion; KEGG Orthology: K00161; pyruvate dehydrogenase e1-alpha subunit complement(881242..882351) Mycoplasma fermentans M64 10113156 YP_004137203.1 CDS MfeM64YM_0831 NC_014921.1 882418 882564 R hypothetical protein complement(882418..882564) Mycoplasma fermentans M64 10113157 YP_004137204.1 CDS fic-4 NC_014921.1 882613 883662 D Functional Classification (COG): Function unknown; filamentation induced by camp protein fic 882613..883662 Mycoplasma fermentans M64 10113158 YP_004137205.1 CDS MfeM64YM_0833 NC_014921.1 883753 884148 D Functional Classification (COG): DNA replication, recombination, and repair; transposase, mutator type 883753..884148 Mycoplasma fermentans M64 10113159 YP_004137206.1 CDS MfeM64YM_0834 NC_014921.1 884141 884227 D hypothetical protein 884141..884227 Mycoplasma fermentans M64 10113160 YP_004137207.1 CDS MfeM64YM_0835 NC_014921.1 884330 884935 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K07493; transposase, mutator family 884330..884935 Mycoplasma fermentans M64 10113161 YP_004137208.1 CDS tnpA-17 NC_014921.1 885193 885630 D KEGG Orthology: K07497; transposase 885193..885630 Mycoplasma fermentans M64 10113162 YP_004137209.1 CDS MfeM64YM_0837 NC_014921.1 885766 885975 D hypothetical protein 885766..885975 Mycoplasma fermentans M64 10113163 YP_004137210.1 CDS MfeM64YM_0838 NC_014921.1 886283 887449 R hypothetical protein complement(886283..887449) Mycoplasma fermentans M64 10113164 YP_004137211.1 CDS MfeM64YM_0839 NC_014921.1 887497 888423 R hypothetical protein complement(887497..888423) Mycoplasma fermentans M64 10113165 YP_004137212.1 CDS MfeM64YM_0840 NC_014921.1 888657 888785 R hypothetical protein complement(888657..888785) Mycoplasma fermentans M64 10113166 YP_004137213.1 CDS MfeM64YM_0841 NC_014921.1 889013 893278 R hypothetical protein complement(889013..893278) Mycoplasma fermentans M64 10113167 YP_004137214.1 CDS MfeM64YM_0842 NC_014921.1 893324 894007 R hypothetical protein complement(893324..894007) Mycoplasma fermentans M64 10113168 YP_004137215.1 CDS trsE-7 NC_014921.1 893988 896801 R Functional Classification (COG): Intracellular trafficking and secretion; trse-like protein complement(893988..896801) Mycoplasma fermentans M64 10113169 YP_004137216.1 CDS MfeM64YM_0844 NC_014921.1 896817 898007 R hypothetical protein complement(896817..898007) Mycoplasma fermentans M64 10113170 YP_004137217.1 CDS MfeM64YM_0845 NC_014921.1 898007 898288 R hypothetical protein complement(898007..898288) Mycoplasma fermentans M64 10113171 YP_004137218.1 CDS MfeM64YM_0846 NC_014921.1 898403 899971 R hypothetical protein complement(898403..899971) Mycoplasma fermentans M64 10113172 YP_004137219.1 CDS MfeM64YM_0847 NC_014921.1 899995 900249 R hypothetical protein complement(899995..900249) Mycoplasma fermentans M64 10113173 YP_004137220.1 CDS MfeM64YM_0848 NC_014921.1 900249 900800 R Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03111; pfam00436, SSB, Single-strand binding protein family. This family includes single stranded binding proteins and also the primosomal replication protein N (PriB). PriB forms a complex with PriA, PriC and ssDNA.; hypothetical protein complement(900249..900800) Mycoplasma fermentans M64 10113174 YP_004137221.1 CDS MfeM64YM_0849 NC_014921.1 900810 901526 R hypothetical protein complement(900810..901526) Mycoplasma fermentans M64 10113175 YP_004137222.1 CDS MfeM64YM_0850 NC_014921.1 901539 901778 R hypothetical protein complement(901539..901778) Mycoplasma fermentans M64 10113176 YP_004137223.1 CDS MfeM64YM_0851 NC_014921.1 901787 902734 R Functional Classification (COG): Function unknown; COG2849, COG2849, Uncharacterized protein conserved in bacteria [Function unknown].; hypothetical protein complement(901787..902734) Mycoplasma fermentans M64 10113177 YP_004137224.1 CDS MfeM64YM_0852 NC_014921.1 902736 902924 R hypothetical protein complement(902736..902924) Mycoplasma fermentans M64 10113178 YP_004137225.1 CDS MfeM64YM_0853 NC_014921.1 902935 905154 R Functional Classification (COG): Intracellular trafficking and secretion; cd01126, TraG_VirD4, The TraG/TraD/VirD4 family are bacterial conjugation proteins involved in type IV secretion. These proteins aid the transfer of DNA from the plasmid into the host bacterial chromosome. They contain an ATP binding domain. VirD4 is involved in DNA transfer to plant cells and is required for virulence.; hypothetical protein complement(902935..905154) Mycoplasma fermentans M64 10113179 YP_004137226.1 CDS MfeM64YM_0854 NC_014921.1 905154 905621 R hypothetical protein complement(905154..905621) Mycoplasma fermentans M64 10113180 YP_004137227.1 CDS MfeM64YM_0855 NC_014921.1 905631 906833 R hypothetical protein complement(905631..906833) Mycoplasma fermentans M64 10113181 YP_004137228.1 CDS MfeM64YM_0856 NC_014921.1 906854 907045 R hypothetical protein complement(906854..907045) Mycoplasma fermentans M64 10113182 YP_004137229.1 CDS MfeM64YM_0857 NC_014921.1 907276 907995 R hypothetical protein complement(907276..907995) Mycoplasma fermentans M64 10113183 YP_004137230.1 CDS bcrA-3 NC_014921.1 908163 908861 D Functional Classification (COG): Defense mechanisms; KEGG Orthology: K01990; abc transporter ATP-binding protein 908163..908861 Mycoplasma fermentans M64 10113184 YP_004137231.1 CDS MfeM64YM_0859 NC_014921.1 908848 908952 D hypothetical protein 908848..908952 Mycoplasma fermentans M64 10113185 YP_004137232.1 CDS MfeM64YM_0860 NC_014921.1 908965 911067 D hypothetical protein 908965..911067 Mycoplasma fermentans M64 10113186 YP_004137233.1 CDS tnpA-18 NC_014921.1 911149 911301 D transposase 911149..911301 Mycoplasma fermentans M64 10113187 YP_004137234.1 CDS MfeM64YM_0862 NC_014921.1 911313 911876 D Functional Classification (COG): DNA replication, recombination, and repair; transposase, mutator type 911313..911876 Mycoplasma fermentans M64 10113188 YP_004137235.1 CDS MfeM64YM_0863 NC_014921.1 911858 912337 D Functional Classification (COG): DNA replication, recombination, and repair; transposase, mutator type 911858..912337 Mycoplasma fermentans M64 10113189 YP_004137236.1 CDS MfeM64YM_0864 NC_014921.1 912646 913302 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; rnase g and e associated domain containing protein complement(912646..913302) Mycoplasma fermentans M64 10113190 YP_004137237.1 CDS MfeM64YM_0865 NC_014921.1 913289 915364 R hypothetical protein complement(913289..915364) Mycoplasma fermentans M64 10113191 YP_004137238.1 CDS MfeM64YM_0866 NC_014921.1 915592 915807 D hypothetical protein 915592..915807 Mycoplasma fermentans M64 10113192 YP_004137239.1 CDS MfeM64YM_0867 NC_014921.1 915980 917083 D Functional Classification (COG): General function prediction only; lipoprotein, putative acid phosphatase 915980..917083 Mycoplasma fermentans M64 10113193 YP_004137240.1 CDS MfeM64YM_0868 NC_014921.1 917169 917321 D hypothetical protein 917169..917321 Mycoplasma fermentans M64 10113194 YP_004137241.1 CDS tnpA-19 NC_014921.1 917408 918571 D Functional Classification (COG): DNA replication, recombination, and repair; transposase 917408..918571 Mycoplasma fermentans M64 10113195 YP_004137242.1 CDS MfeM64YM_0870 NC_014921.1 919139 919213 D hypothetical protein 919139..919213 Mycoplasma fermentans M64 10113198 YP_004137243.1 CDS MfeM64YM_0871 NC_014921.1 919315 921174 D hypothetical protein 919315..921174 Mycoplasma fermentans M64 10113199 YP_004137244.1 CDS polA NC_014921.1 921223 922107 R Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K02335; DNA polymerase i complement(921223..922107) Mycoplasma fermentans M64 10113200 YP_004137245.1 CDS dnaE NC_014921.1 922107 925010 R Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K02337; DNA polymerase iii alpha subunit complement(922107..925010) Mycoplasma fermentans M64 10113201 YP_004137246.1 CDS MfeM64YM_0874 NC_014921.1 925114 925494 D hypothetical protein 925114..925494 Mycoplasma fermentans M64 10113202 YP_004137247.1 CDS MfeM64YM_0875 NC_014921.1 925526 926863 R hypothetical protein complement(925526..926863) Mycoplasma fermentans M64 10113203 YP_004137248.1 CDS frr NC_014921.1 926963 927514 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02838; ribosome-recycling factor complement(926963..927514) Mycoplasma fermentans M64 10113204 YP_004137249.1 CDS pyrH NC_014921.1 927514 928230 R Functional Classification (COG): Nucleotide transport and metabolism; KEGG Orthology: K09903; uridylate kinase complement(927514..928230) Mycoplasma fermentans M64 10113205 YP_004137250.1 CDS MfeM64YM_0878 NC_014921.1 928386 928964 R hypothetical protein complement(928386..928964) Mycoplasma fermentans M64 10113206 YP_004137251.1 CDS MfeM64YM_0879 NC_014921.1 929090 931282 D hypothetical protein 929090..931282 Mycoplasma fermentans M64 10113207 YP_004137252.1 CDS MfeM64YM_0880 NC_014921.1 931298 932632 D putative p60-like lipoprotein 931298..932632 Mycoplasma fermentans M64 10113208 YP_004137253.1 CDS hit NC_014921.1 932643 932978 D Functional Classification (COG): Nucleotide transport and metabolism/Carbohydrate transport and metabolism/General function prediction only; KEGG Orthology: K02503; hit-like protein 932643..932978 Mycoplasma fermentans M64 10113209 YP_004137254.1 CDS himA NC_014921.1 933173 933448 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03530; bacterial nucleoid DNA-binding protein 933173..933448 Mycoplasma fermentans M64 10113210 YP_004137255.1 CDS recU NC_014921.1 933461 933949 R Functional Classification (COG): General function prediction only; KEGG Orthology: K03700; holliday junction resolvase recu complement(933461..933949) Mycoplasma fermentans M64 10113211 YP_004137256.1 CDS MfeM64YM_0884 NC_014921.1 933948 934079 D hypothetical protein 933948..934079 Mycoplasma fermentans M64 10113212 YP_004137257.1 CDS comEA NC_014921.1 934086 934604 D KEGG Orthology: K02237; competance locus protein comea 934086..934604 Mycoplasma fermentans M64 10113213 YP_004137258.1 CDS MfeM64YM_0886 NC_014921.1 934751 935935 D hypothetical protein 934751..935935 Mycoplasma fermentans M64 10113214 YP_004137259.1 CDS gpsA NC_014921.1 936362 937357 R Functional Classification (COG): Energy production and conversion; KEGG Orthology: K00057; glycerol-3-phosphate dehydrogenase complement(936362..937357) Mycoplasma fermentans M64 10113217 YP_004137260.1 CDS MfeM64YM_0888 NC_014921.1 937370 937795 R hypothetical protein complement(937370..937795) Mycoplasma fermentans M64 10113218 YP_004137261.1 CDS ksgA NC_014921.1 937803 938579 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02528; dimethyladenosine transferase complement(937803..938579) Mycoplasma fermentans M64 10113219 YP_004137262.1 CDS tatD NC_014921.1 938563 939336 R Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03424; mg-dependent dnase complement(938563..939336) Mycoplasma fermentans M64 10113220 YP_004137263.1 CDS mnmE NC_014921.1 939356 940699 R Functional Classification (COG): General function prediction only; KEGG Orthology: K03650; tRNA modification gtpase mnme complement(939356..940699) Mycoplasma fermentans M64 10113221 YP_004137264.1 CDS MfeM64YM_0892 NC_014921.1 940770 941456 D hypothetical protein 940770..941456 Mycoplasma fermentans M64 10113222 YP_004137265.1 CDS nagE NC_014921.1 941494 943248 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K02778; PTS system, n-acetylglucosamine-specific enzyme ii, abc component complement(941494..943248) Mycoplasma fermentans M64 10113223 YP_004137266.1 CDS MfeM64YM_0894 NC_014921.1 943248 943451 R hypothetical protein complement(943248..943451) Mycoplasma fermentans M64 10113224 YP_004137267.1 CDS MfeM64YM_0895 NC_014921.1 943765 944466 R hypothetical protein complement(943765..944466) Mycoplasma fermentans M64 10113225 YP_004137268.1 CDS gap NC_014921.1 944566 945573 R Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K00134; glyceraldehyde-3-phosphate dehydrogenase complement(944566..945573) Mycoplasma fermentans M64 10113226 YP_004137269.1 CDS MfeM64YM_0897 NC_014921.1 945765 946049 R hypothetical protein complement(945765..946049) Mycoplasma fermentans M64 10113227 YP_004137270.1 CDS metS NC_014921.1 946060 947604 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01874; methionyl-tRNA synthetase complement(946060..947604) Mycoplasma fermentans M64 10113228 YP_004137271.1 CDS MfeM64YM_0899 NC_014921.1 947607 948392 R Functional Classification (COG): General function prediction only; DNA methylase complement(947607..948392) Mycoplasma fermentans M64 10113229 YP_004137272.1 CDS vacB NC_014921.1 948395 950578 R Functional Classification (COG): Transcription; KEGG Orthology: K12573; vacb-like ribonuclease ii complement(948395..950578) Mycoplasma fermentans M64 10113230 YP_004137273.1 CDS MfeM64YM_0901 NC_014921.1 950582 950818 R hypothetical protein complement(950582..950818) Mycoplasma fermentans M64 10113231 YP_004137274.1 CDS MfeM64YM_0902 NC_014921.1 951032 952327 D hypothetical protein 951032..952327 Mycoplasma fermentans M64 10113232 YP_004137275.1 CDS gmk NC_014921.1 952426 953025 D Functional Classification (COG): Nucleotide transport and metabolism; KEGG Orthology: K00942; guanylate kinase 952426..953025 Mycoplasma fermentans M64 10113233 YP_004137276.1 CDS prpC NC_014921.1 953025 953792 D Functional Classification (COG): Signal transduction mechanisms; KEGG Orthology: K01090; phosphoprotein serine/threonine phosphatase 953025..953792 Mycoplasma fermentans M64 10113234 YP_004137277.1 CDS pknB NC_014921.1 953794 954792 D Functional Classification (COG): General function prediction only/Signal transduction mechanisms/Transcription/DNA replication, recombination, and repair; KEGG Orthology: K08884; serine/threonine-protein kinase 953794..954792 Mycoplasma fermentans M64 10113235 YP_004137278.1 CDS rsgA NC_014921.1 954805 955641 D Functional Classification (COG): General function prediction only; KEGG Orthology: K06949; putative ribosome biogenesis gtpase rsga 954805..955641 Mycoplasma fermentans M64 10113236 YP_004137279.1 CDS rpe NC_014921.1 955634 956296 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K01783; ribulose-phosphate 3-epimerase 955634..956296 Mycoplasma fermentans M64 10113237 YP_004137280.1 CDS MfeM64YM_0908 NC_014921.1 956296 956364 D hypothetical protein 956296..956364 Mycoplasma fermentans M64 10113238 YP_004137281.1 CDS rpmB NC_014921.1 956414 956614 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02902; 50S ribosomal protein l28 complement(956414..956614) Mycoplasma fermentans M64 10113239 YP_004137282.1 CDS MfeM64YM_0910 NC_014921.1 956722 957258 R hypothetical protein complement(956722..957258) Mycoplasma fermentans M64 10113240 YP_004137283.1 CDS trxB NC_014921.1 957271 958203 R Functional Classification (COG): Posttranslational modification, protein turnover, chaperones; KEGG Orthology: K00384; thioredoxin reductase complement(957271..958203) Mycoplasma fermentans M64 10113241 YP_004137284.1 CDS lgt NC_014921.1 958220 959152 R Functional Classification (COG): Cell envelope biogenesis, outer membrane; KEGG Orthology: K13292; prolipoprotein diacylglyceryl transferase complement(958220..959152) Mycoplasma fermentans M64 10113242 YP_004137285.1 CDS hprK NC_014921.1 959142 960083 R Functional Classification (COG): Signal transduction mechanisms; KEGG Orthology: K06023; hpr kinase/phosphorylase complement(959142..960083) Mycoplasma fermentans M64 10113243 YP_004137286.1 CDS MfeM64YM_0914 NC_014921.1 960994 961170 R hypothetical protein complement(960994..961170) Mycoplasma fermentans M64 10113244 YP_004137287.1 CDS pstS NC_014921.1 961163 962170 R Functional Classification (COG): Inorganic ion transport and metabolism; KEGG Orthology: K02040; phosphate binding protein psts complement(961163..962170) Mycoplasma fermentans M64 10113245 YP_004137288.1 CDS MfeM64YM_0916 NC_014921.1 962169 962243 D hypothetical protein 962169..962243 Mycoplasma fermentans M64 10113246 YP_004137289.1 CDS pstA NC_014921.1 962361 964172 D Functional Classification (COG): Inorganic ion transport and metabolism; KEGG Orthology: K02038; phosphate abc transporter permease protein psta 962361..964172 Mycoplasma fermentans M64 10113247 YP_004137290.1 CDS pstB NC_014921.1 964181 964951 D Functional Classification (COG): Inorganic ion transport and metabolism; KEGG Orthology: K02036; phosphate import ATP-binding protein pstb 964181..964951 Mycoplasma fermentans M64 10113248 YP_004137291.1 CDS phoU NC_014921.1 964956 965657 D KEGG Orthology: K02039; phosphate transport system regulatory protein 964956..965657 Mycoplasma fermentans M64 10113249 YP_004137292.1 CDS pepA-2 NC_014921.1 965866 967239 D Functional Classification (COG): Amino acid transport and metabolism; KEGG Orthology: K01255; leucyl aminopeptidase 965866..967239 Mycoplasma fermentans M64 10113250 YP_004137293.1 CDS tdk NC_014921.1 967312 967890 D Functional Classification (COG): Nucleotide transport and metabolism; KEGG Orthology: K00857; thymidine kinase 967312..967890 Mycoplasma fermentans M64 10113251 YP_004137294.1 CDS MfeM64YM_0922 NC_014921.1 967963 968154 R hypothetical protein complement(967963..968154) Mycoplasma fermentans M64 10113252 YP_004137295.1 CDS MfeM64YM_0923 NC_014921.1 968264 968893 R Functional Classification (COG): General function prediction only; putative aaa+ superfamily atpase complement(968264..968893) Mycoplasma fermentans M64 10113253 YP_004137296.1 CDS exiS-3 NC_014921.1 969244 969708 R exis complement(969244..969708) Mycoplasma fermentans M64 10113254 YP_004137297.1 CDS MfeM64YM_0925 NC_014921.1 969995 970456 D hypothetical protein 969995..970456 Mycoplasma fermentans M64 10113255 YP_004137298.1 CDS int-4 NC_014921.1 970694 971785 D int 970694..971785 Mycoplasma fermentans M64 10113256 YP_004137299.1 CDS mem-2 NC_014921.1 971845 972492 R mem complement(971845..972492) Mycoplasma fermentans M64 10113257 YP_004137300.1 CDS MfeM64YM_0928 NC_014921.1 972492 972602 R hypothetical protein complement(972492..972602) Mycoplasma fermentans M64 10113258 YP_004137301.1 CDS MfeM64YM_0929 NC_014921.1 972625 972786 R hypothetical protein complement(972625..972786) Mycoplasma fermentans M64 10113259 YP_004137302.1 CDS htpB-2 NC_014921.1 972786 974171 R htpb complement(972786..974171) Mycoplasma fermentans M64 10113260 YP_004137303.1 CDS htpA-2 NC_014921.1 974188 975603 R htpa complement(974188..975603) Mycoplasma fermentans M64 10113261 YP_004137304.1 CDS htpE-2 NC_014921.1 975606 976598 R htpe complement(975606..976598) Mycoplasma fermentans M64 10113262 YP_004137305.1 CDS MfeM64YM_0933 NC_014921.1 976611 977141 R hypothetical protein complement(976611..977141) Mycoplasma fermentans M64 10113263 YP_004137306.1 CDS htpT-2 NC_014921.1 977183 979021 R htpt complement(977183..979021) Mycoplasma fermentans M64 10113264 YP_004137307.1 CDS htpN-2 NC_014921.1 979032 980189 R htpn complement(979032..980189) Mycoplasma fermentans M64 10113265 YP_004137308.1 CDS marRP-2 NC_014921.1 980170 981852 R marrp complement(980170..981852) Mycoplasma fermentans M64 10113266 YP_004137309.1 CDS MfeM64YM_0937 NC_014921.1 981840 982154 R hypothetical protein complement(981840..982154) Mycoplasma fermentans M64 10113267 YP_004137310.1 CDS marMP-2 NC_014921.1 982286 983086 R c-5 cytosine-specific DNA methylase complement(982286..983086) Mycoplasma fermentans M64 10113268 YP_004137311.1 CDS MfeM64YM_0939 NC_014921.1 983090 983251 R hypothetical protein complement(983090..983251) Mycoplasma fermentans M64 10113269 YP_004137312.1 CDS MfeM64YM_0940 NC_014921.1 983244 983405 R hypothetical protein complement(983244..983405) Mycoplasma fermentans M64 10113270 YP_004137313.1 CDS repB-2 NC_014921.1 983414 984268 R Functional Classification (COG): DNA replication, recombination, and repair; repb complement(983414..984268) Mycoplasma fermentans M64 10113271 YP_004137314.1 CDS MfeM64YM_0942 NC_014921.1 984670 984738 R hypothetical protein complement(984670..984738) Mycoplasma fermentans M64 10113272 YP_004137315.1 CDS MfeM64YM_0943 NC_014921.1 984754 985194 R Functional Classification (COG): General function prediction only; aaa+ superfamily atpase complement(984754..985194) Mycoplasma fermentans M64 10113273 YP_004137316.1 CDS potD NC_014921.1 985324 986865 R spermidine/putrescine/abc transporter substrate binding protein complement(985324..986865) Mycoplasma fermentans M64 10113274 YP_004137317.1 CDS potC NC_014921.1 986831 987685 R Functional Classification (COG): Amino acid transport and metabolism; KEGG Orthology: K11070; spermidine/putrescine abc transporter permeaseprotein potc complement(986831..987685) Mycoplasma fermentans M64 10113275 YP_004137318.1 CDS potB NC_014921.1 987700 988518 R Functional Classification (COG): Amino acid transport and metabolism; KEGG Orthology: K11071; spermidine/putrescine abc transporter permeaseprotein potb complement(987700..988518) Mycoplasma fermentans M64 10113276 YP_004137319.1 CDS potA NC_014921.1 988502 989875 R Functional Classification (COG): Amino acid transport and metabolism; KEGG Orthology: K11072; spermidine/putrescine abc transporterATP-binding protein pota complement(988502..989875) Mycoplasma fermentans M64 10113277 YP_004137320.1 CDS MfeM64YM_0948 NC_014921.1 989996 990148 R hypothetical protein complement(989996..990148) Mycoplasma fermentans M64 10113278 YP_004137321.1 CDS MfeM64YM_0949 NC_014921.1 990482 990652 R hypothetical protein complement(990482..990652) Mycoplasma fermentans M64 10113279 YP_004137322.1 CDS MfeM64YM_0950 NC_014921.1 990709 990816 D hypothetical protein 990709..990816 Mycoplasma fermentans M64 10113280 YP_004137323.1 CDS rpsT NC_014921.1 991001 991276 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02968; 30S ribosomal protein s20 991001..991276 Mycoplasma fermentans M64 10113281 YP_004137324.1 CDS nox NC_014921.1 991338 992702 R Functional Classification (COG): General function prediction only; KEGG Orthology: K00356; NADH oxidase complement(991338..992702) Mycoplasma fermentans M64 10113282 YP_004137325.1 CDS MfeM64YM_0953 NC_014921.1 992869 993942 R hypothetical protein complement(992869..993942) Mycoplasma fermentans M64 10113283 YP_004137326.1 CDS argS-2 NC_014921.1 994101 995732 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; arginyl-tRNA synthetase complement(994101..995732) Mycoplasma fermentans M64 10113284 YP_004137327.1 CDS cysS NC_014921.1 995807 997042 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01883; cysteinyl-tRNA synthetase 995807..997042 Mycoplasma fermentans M64 10113285 YP_004137328.1 CDS spoU-2 NC_014921.1 997088 997783 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K03218; tRNA/rRNA methyltransferase 997088..997783 Mycoplasma fermentans M64 10113286 YP_004137329.1 CDS MfeM64YM_0957 NC_014921.1 997785 998378 D hypothetical protein 997785..998378 Mycoplasma fermentans M64 10113287 YP_004137330.1 CDS MfeM64YM_0958 NC_014921.1 998616 998828 D hypothetical protein 998616..998828 Mycoplasma fermentans M64 10113288 YP_004137331.1 CDS nusG NC_014921.1 998841 999446 D Functional Classification (COG): Transcription; KEGG Orthology: K02601; transcription antitermination protein nusg 998841..999446 Mycoplasma fermentans M64 10113289 YP_004137332.1 CDS MfeM64YM_0960 NC_014921.1 999439 999504 D hypothetical protein 999439..999504 Mycoplasma fermentans M64 10113290 YP_004137333.1 CDS gidB NC_014921.1 999558 1000250 R Functional Classification (COG): Cell envelope biogenesis, outer membrane; KEGG Orthology: K03501; methyltransferase gidb (glucose inhibiteddivision protein b) complement(999558..1000250) Mycoplasma fermentans M64 10113291 YP_004137334.1 CDS prsA NC_014921.1 1000250 1001230 R Functional Classification (COG): Nucleotide transport and metabolism/Amino acid transport and metabolism; KEGG Orthology: K00948; ribose-phosphate pyrophosphokinase complement(1000250..1001230) Mycoplasma fermentans M64 10113292 YP_004137335.1 CDS prfA NC_014921.1 1001450 1002526 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02835; peptide chain release factor 1 1001450..1002526 Mycoplasma fermentans M64 10113293 YP_004137336.1 CDS hemK NC_014921.1 1002528 1003241 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02493; protoporphyrinogen oxidase 1002528..1003241 Mycoplasma fermentans M64 10113294 YP_004137337.1 CDS acpP NC_014921.1 1003265 1003498 D acyl carrier protein 1003265..1003498 Mycoplasma fermentans M64 10113295 YP_004137338.1 CDS MfeM64YM_0966 NC_014921.1 1003685 1007473 R hypothetical protein complement(1003685..1007473) Mycoplasma fermentans M64 10113297 YP_004137339.1 CDS MfeM64YM_0967 NC_014921.1 1007554 1007634 R hypothetical protein complement(1007554..1007634) Mycoplasma fermentans M64 10113298 YP_004137340.1 CDS deoD-3 NC_014921.1 1007750 1008457 D Functional Classification (COG): Nucleotide transport and metabolism; purine-nucleoside phosphorylase 1007750..1008457 Mycoplasma fermentans M64 10113299 YP_004137341.1 CDS MfeM64YM_0969 NC_014921.1 1008503 1009375 R KEGG Orthology: K01992; abc-2 type transporter complement(1008503..1009375) Mycoplasma fermentans M64 10113300 YP_004137342.1 CDS MfeM64YM_0970 NC_014921.1 1009377 1010297 R Functional Classification (COG): Defense mechanisms; KEGG Orthology: K09687; abc transporter related protein complement(1009377..1010297) Mycoplasma fermentans M64 10113301 YP_004137343.1 CDS dnaX NC_014921.1 1010477 1012291 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K02343; DNA polymerase iii subunits gamma and tau 1010477..1012291 Mycoplasma fermentans M64 10113302 YP_004137344.1 CDS MfeM64YM_0972 NC_014921.1 1012339 1012635 D PRK00587, PRK00587, hypothetical protein; Provisional.; hypothetical protein 1012339..1012635 Mycoplasma fermentans M64 10113303 YP_004137345.1 CDS recR NC_014921.1 1012638 1013228 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K06187; recombination protein recr 1012638..1013228 Mycoplasma fermentans M64 10113304 YP_004137346.1 CDS tmk NC_014921.1 1013248 1013904 D Functional Classification (COG): Nucleotide transport and metabolism; KEGG Orthology: K00943; thymidylate kinase 1013248..1013904 Mycoplasma fermentans M64 10113305 YP_004137347.1 CDS holB NC_014921.1 1013904 1014821 D Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K02341; DNA polymerase iii subunit delta 1013904..1014821 Mycoplasma fermentans M64 10113306 YP_004137348.1 CDS MfeM64YM_0976 NC_014921.1 1014814 1015524 D Functional Classification (COG): General function prediction only; KEGG Orthology: K07056; putative sam-dependent methyltransferase 1014814..1015524 Mycoplasma fermentans M64 10113307 YP_004137349.1 CDS MfeM64YM_0977 NC_014921.1 1015603 1017255 D Functional Classification (COG): General function prediction only; COG0595, COG0595, hydrolase of the metallo-beta-lactamase superfamily [General function prediction only].; hypothetical protein 1015603..1017255 Mycoplasma fermentans M64 10113308 YP_004137350.1 CDS MfeM64YM_0978 NC_014921.1 1017789 1019075 D Functional Classification (COG): General function prediction only; cd06354, PBP1_BmpA_PnrA_like, Periplasmic binding domain of basic membrane lipoprotein, PnrA, in Treponema pallidum and its homologs from other bacteria and archaea. The PnrA lipoprotein, also known as Tp0319 or TmpC, represents a novel family of bacterial purine nucleoside receptor encoded within an ATP-binding cassette (ABC) transport system (pnrABCDE). It shows a striking structural similarity to another basic membrane lipoprotein Med which regulates the competence transcription factor gene, comK, in Bacillus subtilis. The members of PnrA-like subgroup are likely to have similar nucleoside-binding functions and a similar type I periplasmic sugar-binding protein-like fold.; hypothetical protein 1017789..1019075 Mycoplasma fermentans M64 10113309 YP_004137351.1 CDS tnpA-20 NC_014921.1 1019277 1020440 R Functional Classification (COG): DNA replication, recombination, and repair; transposase complement(1019277..1020440) Mycoplasma fermentans M64 10113310 YP_004137352.1 CDS MfeM64YM_0980 NC_014921.1 1021165 1021284 R hypothetical protein complement(1021165..1021284) Mycoplasma fermentans M64 10113311 YP_004137353.1 CDS mglA NC_014921.1 1021525 1023327 D Functional Classification (COG): General function prediction only; KEGG Orthology: K02056; putative sugar abc transporter ATP-binding protein 1021525..1023327 Mycoplasma fermentans M64 10113312 YP_004137354.1 CDS MfeM64YM_0982 NC_014921.1 1023327 1024937 D Functional Classification (COG): General function prediction only; KEGG Orthology: K02057; sugar abc transporter permease protein 1023327..1024937 Mycoplasma fermentans M64 10113313 YP_004137355.1 CDS MfeM64YM_0983 NC_014921.1 1024937 1025917 D Functional Classification (COG): General function prediction only; KEGG Orthology: K02057; sugar abc transporter permease protein 1024937..1025917 Mycoplasma fermentans M64 10113314 YP_004137356.1 CDS MfeM64YM_0984 NC_014921.1 1025936 1027978 D PRK00448, polC, DNA polymerase III PolC; Validated.; hypothetical protein 1025936..1027978 Mycoplasma fermentans M64 10113315 YP_004137357.1 CDS trx NC_014921.1 1028282 1028596 D Functional Classification (COG): Posttranslational modification, protein turnover, chaperones; KEGG Orthology: K03671; thioredoxin 1028282..1028596 Mycoplasma fermentans M64 10113316 YP_004137358.1 CDS smpB NC_014921.1 1028644 1029087 D Functional Classification (COG): Posttranslational modification, protein turnover, chaperones; KEGG Orthology: K03664; ssra-binding protein 1028644..1029087 Mycoplasma fermentans M64 10113317 YP_004137359.1 CDS MfeM64YM_0987 NC_014921.1 1029116 1030072 R Functional Classification (COG): Transcription; COG1609, PurR, Transcriptional regulators [Transcription].; hypothetical protein complement(1029116..1030072) Mycoplasma fermentans M64 10113318 YP_004137360.1 CDS MfeM64YM_0988 NC_014921.1 1030322 1030396 R hypothetical protein complement(1030322..1030396) Mycoplasma fermentans M64 10113319 YP_004137361.1 CDS gyrB NC_014921.1 1030945 1032867 R Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K02470; DNA gyrase subunit b complement(1030945..1032867) Mycoplasma fermentans M64 10113321 YP_004137362.1 CDS MfeM64YM_0990 NC_014921.1 1033204 1034670 D Functional Classification (COG): Function unknown; COG1284, COG1284, Uncharacterized conserved protein [Function unknown].; hypothetical protein 1033204..1034670 Mycoplasma fermentans M64 10113322 YP_004137363.1 CDS lip-2 NC_014921.1 1034737 1035627 D Functional Classification (COG): General function prediction only; esterase/lipase 1034737..1035627 Mycoplasma fermentans M64 10113323 YP_004137364.1 CDS MfeM64YM_0992 NC_014921.1 1035637 1036578 D hypothetical protein 1035637..1036578 Mycoplasma fermentans M64 10113324 YP_004137365.1 CDS serS NC_014921.1 1036655 1037926 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01875; seryl-tRNA synthetase complement(1036655..1037926) Mycoplasma fermentans M64 10113325 YP_004137366.1 CDS rpmH NC_014921.1 1038188 1038337 D 50S ribosomal protein l34 1038188..1038337 Mycoplasma fermentans M64 10113326 YP_004137367.1 CDS rnpA NC_014921.1 1038354 1038686 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K03536; ribonuclease p protein component 1038354..1038686 Mycoplasma fermentans M64 10113327 YP_004137368.1 CDS MfeM64YM_0996 NC_014921.1 1038829 1040646 D Functional Classification (COG): Intracellular trafficking and secretion; KEGG Orthology: K03217; PRK02201, PRK02201, putative inner membrane protein translocase component YidC; Provisional.; hypothetical protein 1038829..1040646 Mycoplasma fermentans M64 10113328 YP_004137369.1 CDS ndt NC_014921.1 1040776 1041249 D Functional Classification (COG): Nucleotide transport and metabolism; nucleoside 2-deoxyribosyltransferase 1040776..1041249 Mycoplasma fermentans M64 10113329 YP_004137370.1 CDS tkt NC_014921.1 1041327 1043273 D Functional Classification (COG): Carbohydrate transport and metabolism; KEGG Orthology: K00615; transketolase 1041327..1043273 Mycoplasma fermentans M64 10113330 YP_004137371.1 CDS tm2d NC_014921.1 1043466 1043753 D tm2 domain containing protein 1043466..1043753 Mycoplasma fermentans M64 10113331 YP_004137372.1 CDS MfeM64YM_1000 NC_014921.1 1043989 1045050 D Functional Classification (COG): Function unknown; antifreeze protein type i 1043989..1045050 Mycoplasma fermentans M64 10113332 YP_004137373.1 CDS MfeM64YM_1001 NC_014921.1 1045052 1045597 D hypothetical protein 1045052..1045597 Mycoplasma fermentans M64 10113333 YP_004137374.1 CDS MfeM64YM_1002 NC_014921.1 1045600 1045872 D hypothetical protein 1045600..1045872 Mycoplasma fermentans M64 10113334 YP_004137375.1 CDS MfeM64YM_1003 NC_014921.1 1046032 1046397 D hypothetical protein 1046032..1046397 Mycoplasma fermentans M64 10113335 YP_004137376.1 CDS MfeM64YM_1004 NC_014921.1 1046548 1047366 R hypothetical protein complement(1046548..1047366) Mycoplasma fermentans M64 10113336 YP_004137377.1 CDS rnhB-2 NC_014921.1 1047445 1048041 R Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03470; ribonuclease complement(1047445..1048041) Mycoplasma fermentans M64 10113337 YP_004137378.1 CDS MfeM64YM_1006 NC_014921.1 1048095 1049045 R hypothetical protein complement(1048095..1049045) Mycoplasma fermentans M64 10113338 YP_004137379.1 CDS rluD NC_014921.1 1049072 1049995 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K06180; pseudouridine synthase complement(1049072..1049995) Mycoplasma fermentans M64 10113339 YP_004137380.1 CDS chrA-1 NC_014921.1 1050036 1050701 R Functional Classification (COG): Inorganic ion transport and metabolism; chromate transport protein complement(1050036..1050701) Mycoplasma fermentans M64 10113340 YP_004137381.1 CDS chrA-2 NC_014921.1 1050701 1051429 R Functional Classification (COG): Inorganic ion transport and metabolism; KEGG Orthology: K07240; putative chromate transport protein complement(1050701..1051429) Mycoplasma fermentans M64 10113341 YP_004137382.1 CDS aldH NC_014921.1 1051591 1052940 D Functional Classification (COG): Energy production and conversion; KEGG Orthology: K00128; aldehyde dehydrogenase 1051591..1052940 Mycoplasma fermentans M64 10113342 YP_004137383.1 CDS MfeM64YM_1011 NC_014921.1 1053034 1053456 R hypothetical protein complement(1053034..1053456) Mycoplasma fermentans M64 10113343 YP_004137384.1 CDS glck NC_014921.1 1053570 1054451 D Functional Classification (COG): Transcription/Carbohydrate transport and metabolism; KEGG Orthology: K00845; glucokinase 1053570..1054451 Mycoplasma fermentans M64 10113344 YP_004137385.1 CDS MfeM64YM_1013 NC_014921.1 1054598 1055242 D hypothetical protein 1054598..1055242 Mycoplasma fermentans M64 10113345 YP_004137386.1 CDS MfeM64YM_1014 NC_014921.1 1055256 1057178 D hypothetical protein 1055256..1057178 Mycoplasma fermentans M64 10113346 YP_004137387.1 CDS MfeM64YM_1015 NC_014921.1 1057344 1058471 R putative potassium channel protein complement(1057344..1058471) Mycoplasma fermentans M64 10113348 YP_004137388.1 CDS MfeM64YM_1016 NC_014921.1 1058560 1059108 D hypothetical protein 1058560..1059108 Mycoplasma fermentans M64 10113349 YP_004137389.1 CDS pgsA NC_014921.1 1059092 1059721 D Functional Classification (COG): Lipid metabolism; KEGG Orthology: K00995; cdp-diacylglycerol-glycerol-3-phosphate3- phosphat idyltransferase 1059092..1059721 Mycoplasma fermentans M64 10113350 YP_004137390.1 CDS MfeM64YM_1018 NC_014921.1 1059760 1060047 R hypothetical protein complement(1059760..1060047) Mycoplasma fermentans M64 10113351 YP_004137391.1 CDS MfeM64YM_1019 NC_014921.1 1060082 1060837 R Functional Classification (COG): Transcription; KEGG Orthology: K12410; PRK00481, PRK00481, NAD-dependent deacetylase; Provisional.; hypothetical protein complement(1060082..1060837) Mycoplasma fermentans M64 10113352 YP_004137392.1 CDS trmB-1 NC_014921.1 1060844 1061059 R tRNA (guanine-n(7)-)-methyltransferase complement(1060844..1061059) Mycoplasma fermentans M64 10113353 YP_004137393.1 CDS trmB-2 NC_014921.1 1061038 1061457 R Functional Classification (COG): General function prediction only; KEGG Orthology: K03439; tRNA (guanine-n(7)-)-methyltransferase complement(1061038..1061457) Mycoplasma fermentans M64 10113354 YP_004137394.1 CDS MfeM64YM_1022 NC_014921.1 1061565 1061759 D Functional Classification (COG): Transcription; transcriptional regulator, xre family 1061565..1061759 Mycoplasma fermentans M64 10113355 YP_004137395.1 CDS MfeM64YM_1023 NC_014921.1 1061759 1064854 D Functional Classification (COG): Defense mechanisms; KEGG Orthology: K01153; putative type i restriction enzyme 1061759..1064854 Mycoplasma fermentans M64 10113356 YP_004137396.1 CDS MfeM64YM_1024 NC_014921.1 1064863 1066518 D Functional Classification (COG): Defense mechanisms; KEGG Orthology: K03427; n-6 DNA methylase 1064863..1066518 Mycoplasma fermentans M64 10113357 YP_004137397.1 CDS MfeM64YM_1025 NC_014921.1 1066535 1067653 D Functional Classification (COG): Defense mechanisms; KEGG Orthology: K01154; restriction modification system DNA specificity domain 1066535..1067653 Mycoplasma fermentans M64 10113358 YP_004137398.1 CDS hsdS-4 NC_014921.1 1067677 1068765 R Functional Classification (COG): Defense mechanisms; KEGG Orthology: K01154; type i restriction enzyme specificity protein complement(1067677..1068765) Mycoplasma fermentans M64 10113359 YP_004137399.1 CDS MfeM64YM_1027 NC_014921.1 1068827 1069399 R Functional Classification (COG): DNA replication, recombination, and repair; DNA-invertase binr (transposon tn552) complement(1068827..1069399) Mycoplasma fermentans M64 10113360 YP_004137400.1 CDS clpB NC_014921.1 1069563 1071716 D Functional Classification (COG): Posttranslational modification, protein turnover, chaperones; KEGG Orthology: K03695; ATP-dependent clp protease, atpase subunit 1069563..1071716 Mycoplasma fermentans M64 10113361 YP_004137401.1 CDS polC NC_014921.1 1071789 1076174 R Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03763; DNA polymerase iii alpha subunit complement(1071789..1076174) Mycoplasma fermentans M64 10113362 YP_004137402.1 CDS MfeM64YM_1030 NC_014921.1 1076250 1076495 D hypothetical protein 1076250..1076495 Mycoplasma fermentans M64 10113363 YP_004137403.1 CDS MfeM64YM_1031 NC_014921.1 1076640 1077368 R hypothetical protein complement(1076640..1077368) Mycoplasma fermentans M64 10113364 YP_004137404.1 CDS MfeM64YM_1032 NC_014921.1 1077398 1078090 R PRK13613, PRK13613, lipoprotein LpqB; Provisional.; hypothetical protein complement(1077398..1078090) Mycoplasma fermentans M64 10113365 YP_004137405.1 CDS MfeM64YM_1033 NC_014921.1 1078097 1079407 R hypothetical protein complement(1078097..1079407) Mycoplasma fermentans M64 10113366 YP_004137406.1 CDS exiS-4 NC_014921.1 1079863 1080204 R exis complement(1079863..1080204) Mycoplasma fermentans M64 10113367 YP_004137407.1 CDS tnpA-21 NC_014921.1 1080284 1080745 D Functional Classification (COG): DNA replication, recombination, and repair; transposase 1080284..1080745 Mycoplasma fermentans M64 10113368 YP_004137408.1 CDS tnpA-22 NC_014921.1 1080748 1080954 D Functional Classification (COG): DNA replication, recombination, and repair; transposase 1080748..1080954 Mycoplasma fermentans M64 10113369 YP_004137409.1 CDS MfeM64YM_1037 NC_014921.1 1081049 1081186 D hypothetical protein 1081049..1081186 Mycoplasma fermentans M64 10113370 YP_004137410.1 CDS MfeM64YM_1038 NC_014921.1 1081387 1081770 R hypothetical protein complement(1081387..1081770) Mycoplasma fermentans M64 10113371 YP_004137411.1 CDS proS NC_014921.1 1081812 1083248 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01881; prolyl-tRNA synthetase complement(1081812..1083248) Mycoplasma fermentans M64 10113372 YP_004137412.1 CDS rpmG NC_014921.1 1083380 1083532 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02913; 50S ribosomal protein l33 complement(1083380..1083532) Mycoplasma fermentans M64 10113373 YP_004137413.1 CDS MfeM64YM_1041 NC_014921.1 1083612 1083854 R hypothetical protein complement(1083612..1083854) Mycoplasma fermentans M64 10113374 YP_004137414.1 CDS MfeM64YM_1042 NC_014921.1 1083882 1085162 R hypothetical protein complement(1083882..1085162) Mycoplasma fermentans M64 10113375 YP_004137415.1 CDS MfeM64YM_1043 NC_014921.1 1085257 1086909 R Functional Classification (COG): Cell division and chromosome partitioning; COG5279, CYK3, Uncharacterized protein involved in cytokinesis, contains TGc (transglutaminase/protease-like) domain [Cell division and chromosome partitioning].; hypothetical protein complement(1085257..1086909) Mycoplasma fermentans M64 10113376 YP_004137416.1 CDS ppa NC_014921.1 1087020 1087574 R Functional Classification (COG): Energy production and conversion; KEGG Orthology: K01507; inorganic pyrophosphatase complement(1087020..1087574) Mycoplasma fermentans M64 10113377 YP_004137417.1 CDS MfeM64YM_1045 NC_014921.1 1087631 1087987 R hypothetical protein complement(1087631..1087987) Mycoplasma fermentans M64 10113378 YP_004137418.1 CDS MfeM64YM_1046 NC_014921.1 1088100 1088936 D Functional Classification (COG): General function prediction only; cof family had hydrolase protein 1088100..1088936 Mycoplasma fermentans M64 10113379 YP_004137419.1 CDS MfeM64YM_1047 NC_014921.1 1088968 1090863 D hypothetical protein 1088968..1090863 Mycoplasma fermentans M64 10113380 YP_004137420.1 CDS bcrA-4 NC_014921.1 1090863 1091891 D Functional Classification (COG): Defense mechanisms; KEGG Orthology: K01990; abc transporter ATP-binding protein 1090863..1091891 Mycoplasma fermentans M64 10113381 YP_004137421.1 CDS MfeM64YM_1049 NC_014921.1 1091949 1094057 R hypothetical protein complement(1091949..1094057) Mycoplasma fermentans M64 10113382 YP_004137422.1 CDS MfeM64YM_1050 NC_014921.1 1094358 1094624 R hypothetical protein complement(1094358..1094624) Mycoplasma fermentans M64 10113383 YP_004137423.1 CDS MfeM64YM_1051 NC_014921.1 1094973 1096814 D Functional Classification (COG): General function prediction only; KEGG Orthology: K12574; COG0595, COG0595, hydrolase of the metallo-beta-lactamase superfamily [General function prediction only].; hypothetical protein 1094973..1096814 Mycoplasma fermentans M64 10113384 YP_004137424.1 CDS MfeM64YM_1052 NC_014921.1 1097272 1097658 R hypothetical protein complement(1097272..1097658) Mycoplasma fermentans M64 10113386 YP_004137425.1 CDS rplK NC_014921.1 1097858 1098460 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02867; 50S ribosomal protein L11 1097858..1098460 Mycoplasma fermentans M64 10113387 YP_004137426.1 CDS rplA NC_014921.1 1098460 1099155 D Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K02863; 50S ribosomal protein L1 1098460..1099155 Mycoplasma fermentans M64 10113388 YP_004137427.1 CDS MfeM64YM_1055 NC_014921.1 1099243 1100271 R Functional Classification (COG): Amino acid transport and metabolism; KEGG Orthology: K00839; aminotransferase class v complement(1099243..1100271) Mycoplasma fermentans M64 10113389 YP_004137428.1 CDS MfeM64YM_1056 NC_014921.1 1100306 1101058 R Functional Classification (COG): Cell envelope biogenesis, outer membrane; nucleotidyl transferase complement(1100306..1101058) Mycoplasma fermentans M64 10113390 YP_004137429.1 CDS cdsA NC_014921.1 1101108 1102013 R Functional Classification (COG): Lipid metabolism; KEGG Orthology: K00981; phosphatidate cytidylyltransferase complement(1101108..1102013) Mycoplasma fermentans M64 10113391 YP_004137430.1 CDS MfeM64YM_1058 NC_014921.1 1102135 1103220 R Functional Classification (COG): Defense mechanisms; KEGG Orthology: K02003; abc transporter ATP-binding protein complement(1102135..1103220) Mycoplasma fermentans M64 10113392 YP_004137431.1 CDS MfeM64YM_1059 NC_014921.1 1103222 1111261 R KEGG Orthology: K02004; abc transporter permease protein complement(1103222..1111261) Mycoplasma fermentans M64 10113393 YP_004137432.1 CDS ftsH NC_014921.1 1111469 1113562 R Functional Classification (COG): Posttranslational modification, protein turnover, chaperones; KEGG Orthology: K03798; cell division protein ftsh complement(1111469..1113562) Mycoplasma fermentans M64 10113394 YP_004137433.1 CDS tilS NC_014921.1 1113621 1114511 R Functional Classification (COG): Cell division and chromosome partitioning; KEGG Orthology: K04075; tRNA(ile)-lysidine synthase complement(1113621..1114511) Mycoplasma fermentans M64 10113395 YP_004137434.1 CDS pth NC_014921.1 1114513 1115073 R Functional Classification (COG): Translation, ribosomal structure and biogenesis; KEGG Orthology: K01056; peptidyl-tRNA hydrolase complement(1114513..1115073) Mycoplasma fermentans M64 10113396 YP_004137435.1 CDS MfeM64YM_1063 NC_014921.1 1115140 1115313 R Functional Classification (COG): DNA replication, recombination, and repair; pfam01443, Viral_helicase1, Viral (Superfamily 1) RNA helicase. Helicase activity for this family has been demonstrated and NTPase activity. This helicase has multiple roles at different stages of viral RNA replication, as dissected by mutational analysis.; hypothetical protein complement(1115140..1115313) Mycoplasma fermentans M64 10113397 YP_004137436.1 CDS MfeM64YM_1064 NC_014921.1 1115595 1115975 R hypothetical protein complement(1115595..1115975) Mycoplasma fermentans M64 10113398 YP_004137437.1 CDS MfeM64YM_1065 NC_014921.1 1115986 1116120 R hypothetical protein complement(1115986..1116120) Mycoplasma fermentans M64 10113399 YP_004137438.1 CDS recD NC_014921.1 1116173 1118413 R Functional Classification (COG): DNA replication, recombination, and repair; KEGG Orthology: K03581; exodeoxyribonuclease v, alpha subunit complement(1116173..1118413) Mycoplasma fermentans M64 10113400 YP_004137439.1 CDS MfeM64YM_1067 NC_014921.1 1118626 1118751 R hypothetical protein complement(1118626..1118751) Mycoplasma fermentans M64 10113401 MfeM64YM_t01 tRNA MfeM64YM_t01 NC_014921.1 11772 11845 D tRNA-Thr 11772..11845 Mycoplasma fermentans M64 10112305 MfeM64YM_t02 tRNA MfeM64YM_t02 NC_014921.1 20043 20126 D tRNA-Tyr 20043..20126 Mycoplasma fermentans M64 10112314 MfeM64YM_t03 tRNA MfeM64YM_t03 NC_014921.1 20130 20204 D tRNA-Gln 20130..20204 Mycoplasma fermentans M64 10112315 MfeM64YM_t04 tRNA MfeM64YM_t04 NC_014921.1 21904 21981 R tRNA-Arg complement(21904..21981) Mycoplasma fermentans M64 10112318 MfeM64YM_t05 tRNA MfeM64YM_t05 NC_014921.1 22020 22096 R tRNA-Arg complement(22020..22096) Mycoplasma fermentans M64 10112319 MfeM64YM_t06 tRNA MfeM64YM_t06 NC_014921.1 66877 66953 D tRNA-His 66877..66953 Mycoplasma fermentans M64 10112367 MfeM64YM_t07 tRNA MfeM64YM_t07 NC_014921.1 131599 131674 R tRNA-Thr complement(131599..131674) Mycoplasma fermentans M64 10112433 MfeM64YM_t08 tRNA MfeM64YM_t08 NC_014921.1 175175 175251 D tRNA-Ile 175175..175251 Mycoplasma fermentans M64 10112482 MfeM64YM_t09 tRNA MfeM64YM_t09 NC_014921.1 176293 176376 R tRNA-Leu complement(176293..176376) Mycoplasma fermentans M64 10112484 MfeM64YM_t10 tRNA MfeM64YM_t10 NC_014921.1 275102 275175 D tRNA-OTHER 275102..275175 Mycoplasma fermentans M64 10112577 MfeM64YM_t11 tRNA MfeM64YM_t11 NC_014921.1 278300 278373 D tRNA-Gly 278300..278373 Mycoplasma fermentans M64 10112582 MfeM64YM_t12 tRNA MfeM64YM_t12 NC_014921.1 343156 343230 D tRNA-Asn 343156..343230 Mycoplasma fermentans M64 10112623 MfeM64YM_t13 tRNA MfeM64YM_t13 NC_014921.1 343234 343309 D tRNA-Glu 343234..343309 Mycoplasma fermentans M64 10112624 MfeM64YM_t14 tRNA MfeM64YM_t14 NC_014921.1 343314 343389 D tRNA-Val 343314..343389 Mycoplasma fermentans M64 10112625 MfeM64YM_t15 tRNA MfeM64YM_t15 NC_014921.1 343391 343466 D tRNA-Thr 343391..343466 Mycoplasma fermentans M64 10112626 MfeM64YM_t16 tRNA MfeM64YM_t16 NC_014921.1 343558 343642 D tRNA-Leu 343558..343642 Mycoplasma fermentans M64 10112627 MfeM64YM_t17 tRNA MfeM64YM_t17 NC_014921.1 615739 615823 R tRNA-Leu complement(615739..615823) Mycoplasma fermentans M64 10112875 MfeM64YM_t18 tRNA MfeM64YM_t18 NC_014921.1 684851 684924 D tRNA-Trp 684851..684924 Mycoplasma fermentans M64 10112951 MfeM64YM_t19 tRNA MfeM64YM_t19 NC_014921.1 688814 688905 R tRNA-Ser complement(688814..688905) Mycoplasma fermentans M64 10112955 MfeM64YM_t20 tRNA MfeM64YM_t20 NC_014921.1 692465 692540 R tRNA-Arg complement(692465..692540) Mycoplasma fermentans M64 10112959 MfeM64YM_t21 tRNA MfeM64YM_t21 NC_014921.1 693559 693634 R tRNA-Phe complement(693559..693634) Mycoplasma fermentans M64 10112962 MfeM64YM_t22 tRNA MfeM64YM_t22 NC_014921.1 693639 693715 R tRNA-Asp complement(693639..693715) Mycoplasma fermentans M64 10112963 MfeM64YM_t23 tRNA MfeM64YM_t23 NC_014921.1 693719 693795 R tRNA-Met complement(693719..693795) Mycoplasma fermentans M64 10112964 MfeM64YM_t24 tRNA MfeM64YM_t24 NC_014921.1 693835 693927 R tRNA-Ser complement(693835..693927) Mycoplasma fermentans M64 10112965 MfeM64YM_t25 tRNA MfeM64YM_t25 NC_014921.1 693929 694003 R tRNA-Met complement(693929..694003) Mycoplasma fermentans M64 10112966 MfeM64YM_t26 tRNA MfeM64YM_t26 NC_014921.1 694031 694107 R tRNA-Met complement(694031..694107) Mycoplasma fermentans M64 10112967 MfeM64YM_t27 tRNA MfeM64YM_t27 NC_014921.1 694113 694189 R tRNA-Ala complement(694113..694189) Mycoplasma fermentans M64 10112968 MfeM64YM_t28 tRNA MfeM64YM_t28 NC_014921.1 694193 694269 R tRNA-Pro complement(694193..694269) Mycoplasma fermentans M64 10112969 MfeM64YM_t29 tRNA MfeM64YM_t29 NC_014921.1 918826 918901 R tRNA-Lys complement(918826..918901) Mycoplasma fermentans M64 10113196 MfeM64YM_t30 tRNA MfeM64YM_t30 NC_014921.1 918930 919016 R tRNA-Leu complement(918930..919016) Mycoplasma fermentans M64 10113197 MfeM64YM_t31 tRNA MfeM64YM_t31 NC_014921.1 935962 936038 R tRNA-Arg complement(935962..936038) Mycoplasma fermentans M64 10113215 MfeM64YM_t32 tRNA MfeM64YM_t32 NC_014921.1 936043 936117 R tRNA-Cys complement(936043..936117) Mycoplasma fermentans M64 10113216 MfeM64YM_t33 tRNA MfeM64YM_t33 NC_014921.1 1003531 1003605 D tRNA-Sec 1003531..1003605 Mycoplasma fermentans M64 10113296 MfeM64YM_t34 tRNA MfeM64YM_t34 NC_014921.1 1030527 1030600 D tRNA-Gly 1030527..1030600 Mycoplasma fermentans M64 10113320 MfeM64YM_t35 tRNA MfeM64YM_t35 NC_014921.1 1057214 1057303 R tRNA-Ser complement(1057214..1057303) Mycoplasma fermentans M64 10113347 MfeM64YM_t36 tRNA MfeM64YM_t36 NC_014921.1 1096895 1096970 R tRNA-Lys complement(1096895..1096970) Mycoplasma fermentans M64 10113385 MfeM64YM_r1 rRNA MfeM64YM_r1 NC_014921.1 176450 176546 R 5S ribosomal RNA complement(176450..176546) Mycoplasma fermentans M64 10112485 MfeM64YM_r2 rRNA MfeM64YM_r2 NC_014921.1 695809 698693 R 23S ribosomal RNA complement(695809..698693) Mycoplasma fermentans M64 10112971 MfeM64YM_r3 rRNA MfeM64YM_r3 NC_014921.1 698992 700520 R 16S ribosomal RNA complement(698992..700520) Mycoplasma fermentans M64 10112972 MfeM64YM_r4 rRNA MfeM64YM_r4 NC_014921.1 786898 789781 R 23S ribosomal RNA complement(786898..789781) Mycoplasma fermentans M64 10113067 MfeM64YM_r5 rRNA MfeM64YM_r5 NC_014921.1 790080 791608 R 16S ribosomal RNA complement(790080..791608) Mycoplasma fermentans M64 10113068