-- dump date 20120504_153326 -- class Genbank::CDS -- table cds_note -- id note YP_005064110.1 COG0593 ATPase involved in DNA replication initiation YP_005064111.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_005064112.1 COG1420 Transcriptional regulator of heat shock gene YP_005064113.1 COG1122 ABC-type cobalt transport system, ATPase component YP_005064114.1 COG0009 Putative translation factor (SUA5) YP_005064116.1 COG0250 Transcription antiterminator YP_005064117.1 COG2190 Phosphotransferase system IIA components YP_005064118.1 COG0442 Prolyl-tRNA synthetase YP_005064119.1 COG0166 Glucose-6-phosphate isomerase YP_005064120.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_005064121.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_005064122.1 COG0162 Tyrosyl-tRNA synthetase YP_005064123.1 COG0541 Signal recognition particle GTPase YP_005064124.1 COG0360 Ribosomal protein S6 YP_005064125.1 COG0629 Single-stranded DNA-binding protein YP_005064126.1 COG0238 Ribosomal protein S18 YP_005064127.1 COG0305 Replicative DNA helicase YP_005064129.1 COG0226 ABC-type phosphate transport system, periplasmic component YP_005064130.1 COG0566 rRNA methylases YP_005064131.1 COG0215 Cysteinyl-tRNA synthetase YP_005064132.1 COG0184 Ribosomal protein S15P/S13E YP_005064133.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005064134.1 COG0441 Threonyl-tRNA synthetase YP_005064135.1 COG1164 Oligoendopeptidase F YP_005064136.1 COG0125 Thymidylate kinase YP_005064137.1 COG0468 RecA/RadA recombinase YP_005064138.1 COG0605 Superoxide dismutase YP_005064139.1 COG0143 Methionyl-tRNA synthetase YP_005064140.1 COG0552 Signal recognition particle GTPase YP_005064141.1 COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism YP_005064142.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_005064143.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_005064144.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_005064145.1 COG1266 Predicted metal-dependent membrane protease YP_005064146.1 COG0571 dsRNA-specific ribonuclease YP_005064147.1 COG0477 Permeases of the major facilitator superfamily YP_005064148.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase YP_005064149.1 COG0048 Ribosomal protein S12 YP_005064150.1 COG0049 Ribosomal protein S7 YP_005064151.1 COG0480 Translation elongation factors (GTPases) YP_005064152.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_005064153.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_005064154.1 COG0191 Fructose/tagatose bisphosphate aldolase YP_005064156.1 COG0569 K+ transport systems, NAD-binding component YP_005064157.1 COG0168 Trk-type K+ transport systems, membrane components YP_005064158.1 COG0516 IMP dehydrogenase/GMP reductase YP_005064159.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_005064160.1 COG0492 Thioredoxin reductase YP_005064161.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005064162.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_005064163.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily YP_005064164.1 COG0283 Cytidylate kinase YP_005064167.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_005064170.1 COG0039 Malate/lactate dehydrogenases YP_005064172.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_005064173.1 COG0443 Molecular chaperone YP_005064175.1 COG1692 Uncharacterized protein conserved in bacteria YP_005064176.1 COG2812 DNA polymerase III, gamma/tau subunits YP_005064177.1 COG0718 Uncharacterized protein conserved in bacteria YP_005064178.1 COG1190 Lysyl-tRNA synthetase (class II) YP_005064179.1 COG0587 DNA polymerase III, alpha subunit YP_005064180.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_005064181.1 COG0193 Peptidyl-tRNA hydrolase YP_005064183.1 COG0333 Ribosomal protein L32 YP_005064186.1 COG0208 Ribonucleotide reductase, beta subunit YP_005064187.1 COG1780 Protein involved in ribonucleotide reduction YP_005064188.1 COG0209 Ribonucleotide reductase, alpha subunit YP_005064189.1 COG0017 Aspartyl/asparaginyl-tRNA synthetases YP_005064190.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_005064191.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_005064192.1 COG0013 Alanyl-tRNA synthetase YP_005064195.1 COG0015 Adenylosuccinate lyase YP_005064196.1 COG0015 Adenylosuccinate lyase YP_005064198.1 COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) YP_005064199.1 COG0112 Glycine/serine hydroxymethyltransferase YP_005064200.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005064201.1 COG1078 HD superfamily phosphohydrolases YP_005064202.1 COG3343 DNA-directed RNA polymerase, delta subunit YP_005064203.1 COG0290 Translation initiation factor 3 (IF-3) YP_005064204.1 COG0291 Ribosomal protein L35 YP_005064205.1 COG0292 Ribosomal protein L20 YP_005064206.1 COG4508 Uncharacterized protein conserved in bacteria YP_005064207.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_005064211.1 COG1122 ABC-type cobalt transport system, ATPase component YP_005064212.1 COG1122 ABC-type cobalt transport system, ATPase component YP_005064213.1 COG0619 ABC-type cobalt transport system, permease component CbiQ and related transporters YP_005064215.1 COG0227 Ribosomal protein L28 YP_005064216.1 COG0522 Ribosomal protein S4 and related proteins YP_005064217.1 COG2384 Predicted SAM-dependent methyltransferase YP_005064218.1 COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family YP_005064219.1 COG1039 Ribonuclease HIII YP_005064220.1 COG0018 Arginyl-tRNA synthetase YP_005064221.1 COG3763 Uncharacterized protein conserved in bacteria YP_005064222.1 COG0218 Predicted GTPase YP_005064223.1 COG0525 Valyl-tRNA synthetase YP_005064225.1 COG0658 Predicted membrane metal-binding protein YP_005064228.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_005064231.1 COG0356 F0F1-type ATP synthase, subunit a YP_005064232.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_005064233.1 COG0711 F0F1-type ATP synthase, subunit b YP_005064234.1 COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) YP_005064235.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_005064236.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_005064237.1 COG0055 F0F1-type ATP synthase, beta subunit YP_005064238.1 COG0520 Selenocysteine lyase YP_005064239.1 COG0528 Uridylate kinase YP_005064240.1 COG0233 Ribosome recycling factor YP_005064241.1 COG2176 DNA polymerase III, alpha subunit (gram-positive type) YP_005064242.1 COG0575 CDP-diglyceride synthetase YP_005064243.1 COG2176 DNA polymerase III, alpha subunit (gram-positive type) YP_005064280.1 COG0294 Dihydropteroate synthase and related enzymes YP_005064290.1 COG0732 Restriction endonuclease S subunits YP_005064293.1 COG0618 Exopolyphosphatase-related proteins YP_005064294.1 COG0530 Ca2+/Na+ antiporter YP_005064295.1 COG0060 Isoleucyl-tRNA synthetase YP_005064296.1 COG0194 Guanylate kinase YP_005064297.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005064298.1 COG0431 Predicted flavoprotein YP_005064299.1 COG0813 Purine-nucleoside phosphorylase YP_005064303.1 COG3271 Predicted double-glycine peptidase YP_005064306.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_005064307.1 COG0648 Endonuclease IV YP_005064308.1 COG0267 Ribosomal protein L33 YP_005064309.1 COG0520 Selenocysteine lyase YP_005064310.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_005064311.1 COG0126 3-phosphoglycerate kinase YP_005064312.1 COG0211 Ribosomal protein L27 YP_005064313.1 COG0080 Ribosomal protein L11 YP_005064314.1 COG0081 Ribosomal protein L1 YP_005064337.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005064346.1 COG0778 Nitroreductase YP_005064367.1 COG0477 Permeases of the major facilitator superfamily YP_005064380.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_005064387.1 COG2217 Cation transport ATPase YP_005064451.1 COG0840 Methyl-accepting chemotaxis protein YP_005064471.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005064472.1 COG0556 Helicase subunit of the DNA excision repair complex YP_005064481.1 COG0114 Fumarase YP_005064484.1 COG0408 Coproporphyrinogen III oxidase YP_005064521.1 COG0500 SAM-dependent methyltransferases YP_005064542.1 COG1743 Adenine-specific DNA methylase containing a Zn-ribbon YP_005064549.1 COG0341 Preprotein translocase subunit SecF YP_005064579.1 COG1489 DNA-binding protein, stimulates sugar fermentation YP_005064608.1 COG2130 Putative NADP-dependent oxidoreductases YP_005064611.1 COG0236 Acyl carrier protein YP_005064624.1 COG0228 Ribosomal protein S16 YP_005064625.1 COG0335 Ribosomal protein L19 YP_005064626.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_005064630.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_005064632.1 COG0221 Inorganic pyrophosphatase YP_005064633.1 COG1743 Adenine-specific DNA methylase containing a Zn-ribbon YP_005064634.1 COG0210 Superfamily I DNA and RNA helicases YP_005064635.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_005064636.1 COG2001 Uncharacterized protein conserved in bacteria YP_005064637.1 COG0423 Glycyl-tRNA synthetase (class II) YP_005064638.1 COG0358 DNA primase (bacterial type) YP_005064642.1 COG0268 Ribosomal protein S20 YP_005064644.1 COG0732 Restriction endonuclease S subunits YP_005064645.1 COG0732 Restriction endonuclease S subunits YP_005064646.1 COG0732 Restriction endonuclease S subunits YP_005064647.1 COG0732 Restriction endonuclease S subunits YP_005064648.1 COG0732 Restriction endonuclease S subunits YP_005064649.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005064650.1 COG0732 Restriction endonuclease S subunits YP_005064651.1 COG0732 Restriction endonuclease S subunits YP_005064652.1 COG0732 Restriction endonuclease S subunits YP_005064653.1 COG0732 Restriction endonuclease S subunits YP_005064654.1 COG0732 Restriction endonuclease S subunits YP_005064655.1 COG0732 Restriction endonuclease S subunits YP_005064656.1 COG0732 Restriction endonuclease S subunits YP_005064657.1 COG0732 Restriction endonuclease S subunits YP_005064658.1 COG0732 Restriction endonuclease S subunits YP_005064660.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_005064661.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_005064670.1 COG0556 Helicase subunit of the DNA excision repair complex YP_005064673.1 COG0263 Glutamate 5-kinase YP_005064682.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_005064694.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_005064710.1 COG1840 ABC-type Fe3+ transport system, periplasmic component YP_005064730.1 COG1613 ABC-type sulfate transport system, periplasmic component YP_005064791.1 COG0013 Alanyl-tRNA synthetase YP_005064793.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_005064795.1 COG0441 Threonyl-tRNA synthetase YP_005064805.1 COG0840 Methyl-accepting chemotaxis protein YP_005064811.1 COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase YP_005064831.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_005064844.1 COG0217 Uncharacterized conserved protein YP_005064861.1 COG1643 HrpA-like helicases YP_005064928.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_005064941.1 COG0556 Helicase subunit of the DNA excision repair complex YP_005064953.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_005064954.1 COG2868 Predicted ribosomal protein YP_005064955.1 COG0261 Ribosomal protein L21 YP_005064956.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_005064957.1 COG0103 Ribosomal protein S9 YP_005064958.1 COG0102 Ribosomal protein L13 YP_005064959.1 COG0260 Leucyl aminopeptidase YP_005064960.1 COG0531 Amino acid transporters YP_005064961.1 COG1117 ABC-type phosphate transport system, ATPase component YP_005064962.1 COG0581 ABC-type phosphate transport system, permease component YP_005064969.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_005064970.1 COG1624 Uncharacterized conserved protein YP_005064971.1 COG0558 Phosphatidylglycerophosphate synthase YP_005064973.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_005064990.1 COG1713 Predicted HD superfamily hydrolase involved in NAD metabolism YP_005064991.1 COG1263 Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific YP_005064996.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_005064997.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005064998.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_005064999.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_005065000.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_005065022.1 COG1882 Pyruvate-formate lyase YP_005065036.1 COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit YP_005065061.1 COG0489 ATPases involved in chromosome partitioning YP_005065062.1 COG0480 Translation elongation factors (GTPases) YP_005065074.1 COG0018 Arginyl-tRNA synthetase YP_005065087.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_005065090.1 COG0210 Superfamily I DNA and RNA helicases YP_005065091.1 COG0210 Superfamily I DNA and RNA helicases YP_005065092.1 COG1899 Deoxyhypusine synthase YP_005065093.1 COG0447 Dihydroxynaphthoic acid synthase YP_005065105.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_005065136.1 COG0495 Leucyl-tRNA synthetase YP_005065137.1 COG0173 Aspartyl-tRNA synthetase YP_005065138.1 COG0210 Superfamily I DNA and RNA helicases YP_005065140.1 COG0124 Histidyl-tRNA synthetase YP_005065141.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_005065142.1 COG0536 Predicted GTPase YP_005065144.1 COG0858 Ribosome-binding factor A YP_005065145.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_005065146.1 COG0195 Transcription elongation factor YP_005065148.1 COG0781 Transcription termination factor YP_005065150.1 COG0052 Ribosomal protein S2 YP_005065151.1 COG0782 Transcription elongation factor YP_005065152.1 COG0693 Putative intracellular protease/amidase YP_005065153.1 COG0203 Ribosomal protein L17 YP_005065154.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_005065155.1 COG0100 Ribosomal protein S11 YP_005065156.1 COG0099 Ribosomal protein S13 YP_005065158.1 COG0361 Translation initiation factor 1 (IF-1) YP_005065159.1 COG0024 Methionine aminopeptidase YP_005065161.1 COG0563 Adenylate kinase and related kinases YP_005065162.1 COG0201 Preprotein translocase subunit SecY YP_005065163.1 COG0200 Ribosomal protein L15 YP_005065164.1 COG0098 Ribosomal protein S5 YP_005065165.1 COG0256 Ribosomal protein L18 YP_005065166.1 COG0097 Ribosomal protein L6P/L9E YP_005065167.1 COG0096 Ribosomal protein S8 YP_005065168.1 COG0199 Ribosomal protein S14 YP_005065169.1 COG0094 Ribosomal protein L5 YP_005065170.1 COG0198 Ribosomal protein L24 YP_005065171.1 COG0093 Ribosomal protein L14 YP_005065172.1 COG0186 Ribosomal protein S17 YP_005065173.1 COG0255 Ribosomal protein L29 YP_005065174.1 COG0197 Ribosomal protein L16/L10E YP_005065175.1 COG0092 Ribosomal protein S3 YP_005065176.1 COG0091 Ribosomal protein L22 YP_005065177.1 COG0185 Ribosomal protein S19 YP_005065178.1 COG0090 Ribosomal protein L2 YP_005065179.1 COG0089 Ribosomal protein L23 YP_005065180.1 COG0088 Ribosomal protein L4 YP_005065181.1 COG0087 Ribosomal protein L3 YP_005065182.1 COG0051 Ribosomal protein S10 YP_005065184.1 COG0222 Ribosomal protein L7/L12 YP_005065185.1 COG0244 Ribosomal protein L10 YP_005065186.1 COG0466 ATP-dependent Lon protease, bacterial type YP_005065187.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_005065188.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_005065189.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_005065190.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_005065191.1 COG0469 Pyruvate kinase YP_005065192.1 COG0205 6-phosphofructokinase YP_005065193.1 COG0148 Enolase YP_005065194.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_005065196.1 COG0524 Sugar kinases, ribokinase family YP_005065197.1 COG0254 Ribosomal protein L31 YP_005065198.1 COG0216 Protein chain release factor A YP_005065199.1 COG2890 Methylase of polypeptide chain release factors YP_005065200.1 COG0015 Adenylosuccinate lyase YP_005065201.1 COG0319 Predicted metal-dependent hydrolase YP_005065203.1 COG0557 Exoribonuclease R YP_005065204.1 COG0691 tmRNA-binding protein YP_005065205.1 COG0264 Translation elongation factor Ts YP_005065206.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_005065207.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_005065209.1 COG0776 Bacterial nucleoid DNA-binding protein YP_005065210.1 COG1160 Predicted GTPases YP_005065212.1 COG0510 Predicted choline kinase involved in LPS biosynthesis YP_005065214.1 COG0084 Mg-dependent DNase YP_005065215.1 COG0486 Predicted GTPase YP_005065217.1 COG1161 Predicted GTPases YP_005065218.1 COG0104 Adenylosuccinate synthase YP_005065219.1 COG0050 GTPases - translation elongation factors YP_005065220.1 COG0554 Glycerol kinase YP_005065221.1 COG0618 Exopolyphosphatase-related proteins YP_005065222.1 COG0561 Predicted hydrolases of the HAD superfamily YP_005065224.1 COG1418 Predicted HD superfamily hydrolase YP_005065225.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005065226.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_005065228.1 COG0704 Phosphate uptake regulator YP_005065229.1 COG0073 EMAP domain YP_005065230.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_005065231.1 COG0192 S-adenosylmethionine synthetase YP_005065232.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_005065233.1 COG0687 Spermidine/putrescine-binding periplasmic protein YP_005065234.1 COG1177 ABC-type spermidine/putrescine transport system, permease component II YP_005065235.1 COG1176 ABC-type spermidine/putrescine transport system, permease component I YP_005065236.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_005065240.1 COG0696 Phosphoglyceromutase YP_005065241.1 COG0149 Triosephosphate isomerase YP_005065244.1 COG0481 Membrane GTPase LepA YP_005065246.1 COG0061 Predicted sugar kinase YP_005065247.1 COG1435 Thymidine kinase YP_005065248.1 COG0012 Predicted GTPase, probable translation factor YP_005065249.1 COG0180 Tryptophanyl-tRNA synthetase YP_005065250.1 COG1109 Phosphomannomutase YP_005065251.1 COG1925 Phosphotransferase system, HPr-related proteins YP_005065253.1 COG0035 Uracil phosphoribosyltransferase YP_005065255.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_005065256.1 COG0550 Topoisomerase IA YP_005065257.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily YP_005065258.1 COG0172 Seryl-tRNA synthetase YP_005065259.1 COG0465 ATP-dependent Zn proteases YP_005065262.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_005065263.1 COG0706 Preprotein translocase subunit YidC YP_005065264.1 COG0594 RNase P protein component YP_005065265.1 COG0230 Ribosomal protein L34