-- dump date 20120504_153506 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 743965000001 SEQ_END SEQ_END NC_015946.1 832603 832603 DR NC_015946.1; contig end 832603..832603 Mycoplasma putrefaciens KS1 YP_004789913.1 CDS dnaA NC_015946.1 1 1356 D Identified by match to HMM PF00308.12; identified by match to HMM TIGR00362.; chromosomal replication initiator protein DnaA 1..1356 Mycoplasma putrefaciens KS1 11057059 YP_004789914.1 CDS dnaN NC_015946.1 1572 2699 D Identified by match to HMM PF00712.13; identified by match to HMM TIGR00663.; DNA polymerase III subunit beta 1572..2699 Mycoplasma putrefaciens KS1 11056335 YP_004789915.1 CDS MPUT_0003 NC_015946.1 2757 3311 D Identified by match to HMM PF01751.16; identified by match to HMM TIGR00334.; primase family protein 2757..3311 Mycoplasma putrefaciens KS1 11056336 YP_004789916.1 CDS ksgA NC_015946.1 3295 4086 D Identified by match to HMM PF00398.14; identified by match to HMM TIGR00755.; dimethyladenosine transferase 3295..4086 Mycoplasma putrefaciens KS1 11056337 YP_004789917.1 CDS gyrB NC_015946.1 4745 6649 D DNA gyrase subunit B 4745..6649 Mycoplasma putrefaciens KS1 11056338 YP_004789918.1 CDS gyrA NC_015946.1 6665 9151 D Identified by match to HMM PF00521.1; identified by match to HMM TIGR01063.; DNA gyrase subunit A 6665..9151 Mycoplasma putrefaciens KS1 11056339 YP_004789919.1 CDS fruA NC_015946.1 9293 11353 R Identified by match to HMM PF00359.1; identified by match to HMM TIGR01427. Predicted to contain 10 transmembrane domains.; PTS system fructose specific enzyme IIABC component complement(9293..11353) Mycoplasma putrefaciens KS1 11056340 YP_004789920.1 CDS pfkB NC_015946.1 11344 12294 R Identified by match to HMM PF00294.18; identified by match to HMM TIGR03828.; 1-phosphofructokinase complement(11344..12294) Mycoplasma putrefaciens KS1 11056341 YP_004789921.1 CDS MPUT_0009 NC_015946.1 12689 12928 R Predicted to contain 2 transmembrane domains.; hypothetical protein complement(12689..12928) Mycoplasma putrefaciens KS1 11056342 YP_004789922.1 CDS MPUT_0010 NC_015946.1 12945 13745 R Identified by match to HMM PF01026.15; identified by match to HMM TIGR00010.; hydrolase, TatD deoxyribonuclease family protein complement(12945..13745) Mycoplasma putrefaciens KS1 11056343 YP_004789923.1 CDS MPUT_0011 NC_015946.1 13824 14423 D Identified by match to HMM PF02525.11.; FMN-dependent NADH-azoreductase 13824..14423 Mycoplasma putrefaciens KS1 11056344 YP_004789924.1 CDS MPUT_0012 NC_015946.1 14587 16356 D Identified by match to HMM PF03235.8 (DUF262) and HMM PF07510.5 (DUF1524).; hypothetical protein 14587..16356 Mycoplasma putrefaciens KS1 11056345 YP_004789925.1 CDS MPUT_0013 NC_015946.1 16505 16825 R Predicted to contain 2 transmembrane domains.; hypothetical protein complement(16505..16825) Mycoplasma putrefaciens KS1 11056346 YP_004789926.1 CDS MPUT_0014 NC_015946.1 16966 17250 R predicted lipoprotein with N-terminal signal sequence.; lipoprotein complement(16966..17250) Mycoplasma putrefaciens KS1 11056347 YP_004789927.1 CDS MPUT_0015 NC_015946.1 17883 18308 R predicted lipoprotein with N-terminal signal sequence.; lipoprotein complement(17883..18308) Mycoplasma putrefaciens KS1 11056348 YP_004789928.1 CDS MPUT_0016 NC_015946.1 18649 19074 R predicted lipoprotein with N-terminal signal sequence.; lipoprotein complement(18649..19074) Mycoplasma putrefaciens KS1 11056349 YP_004789929.1 CDS MPUT_0017 NC_015946.1 19309 19767 R Predicted to contain 1 transmembrane domain at N-terminus; hypothetical protein complement(19309..19767) Mycoplasma putrefaciens KS1 11056350 YP_004789930.1 CDS trmE NC_015946.1 19839 21203 R Identified by match to HMM PF10396.3; identified by match to HMM TIGR00450.; tRNA modification GTPase TrmE complement(19839..21203) Mycoplasma putrefaciens KS1 11056351 YP_004789931.1 CDS MPUT_0019 NC_015946.1 21309 21980 R Identified by match to HMM PF02417.9. Predicted to contain 5 transmembrane domains.; putative chromate ion transporter complement(21309..21980) Mycoplasma putrefaciens KS1 11056352 YP_004789932.1 CDS MPUT_0020 NC_015946.1 21980 22600 R Identified by match to HMM PF02417.9; identified by match to HMM TIGR00937. Predicted to contain 6 transmembrane domains.; putative chromate transporter family protein complement(21980..22600) Mycoplasma putrefaciens KS1 11056353 YP_004789933.1 CDS serS NC_015946.1 22679 23947 R Identified by match to HMM PF00587.19; identified by match to HMM TIGR00414.; seryl-tRNA synthetase complement(22679..23947) Mycoplasma putrefaciens KS1 11056354 YP_004789934.1 CDS MPUT_0022 NC_015946.1 24199 24990 R Predicted to contain 6 transmembrane domains.; hypothetical protein complement(24199..24990) Mycoplasma putrefaciens KS1 11056355 YP_004789935.1 CDS MPUT_0023 NC_015946.1 25077 25670 R Predicted to contain 5 transmembrane domains.; hypothetical protein complement(25077..25670) Mycoplasma putrefaciens KS1 11056356 YP_004789936.1 CDS MPUT_0024 NC_015946.1 32857 33927 R Identified by match to HMM PF12695.1; identified by match to HMM TIGR01250. Predicted to contain 1 transmembrane domain.; hypothetical protein complement(32857..33927) Mycoplasma putrefaciens KS1 11056357 YP_004789937.1 CDS MPUT_0025 NC_015946.1 33953 35521 R Predicted to contain 12 transmembrane domains.; hypothetical protein complement(33953..35521) Mycoplasma putrefaciens KS1 11056358 YP_004789938.1 CDS glpQ NC_015946.1 35677 36384 R Identified by match to HMM PF03009.11.; glycerophosphoryldiester phosphodiesterase complement(35677..36384) Mycoplasma putrefaciens KS1 11056359 YP_004789939.1 CDS MPUT_0028 NC_015946.1 38144 38950 D Identified by match to HMM PF01026.15; identified by match to HMM TIGR00010.; hydrolase, TatD deoxyribonuclease family protein 38144..38950 Mycoplasma putrefaciens KS1 11056361 YP_004789940.1 CDS MPUT_0029 NC_015946.1 39428 40966 R Identified by match to HMM PF00005.21; identified by match to HMM TIGR03719; Protein has two ATPase domains.; ABC transporter ATP-binding protein complement(39428..40966) Mycoplasma putrefaciens KS1 11056362 YP_004789941.1 CDS prs NC_015946.1 41163 42197 D Identified by match to PF00156.21; identified by match to HMM TIGR01251.; ribose-phosphate pyrophosphokinase 41163..42197 Mycoplasma putrefaciens KS1 11056363 YP_004789942.1 CDS pth NC_015946.1 42197 42757 D Identified by match to HMM PF01195.13; identified by match to HMM TIGR00447.; peptidyl-tRNA hydrolase 42197..42757 Mycoplasma putrefaciens KS1 11056364 YP_004789943.1 CDS ldh NC_015946.1 42940 43902 D Identified by match to HMM PF00056.17; identified by match to HMM TIGR01771. Predicted to contain 1 transmembrane domain. Match to protein families HMM PF00056.14, PF02866.9 and TIGR01771; L-lactate/malate dehydrogenase 42940..43902 Mycoplasma putrefaciens KS1 11056365 YP_004789944.1 CDS MPUT_0033 NC_015946.1 44088 44807 D Identified by match to HMM PF00106.19; identified by match to HMM TIGR01830.; Oxidoreductase, short chain dehydrogenase/reductase family 44088..44807 Mycoplasma putrefaciens KS1 11056366 YP_004789945.1 CDS MPUT_0034 NC_015946.1 45013 45378 D Predicted to contain 2 transmembrane domains.; hypothetical protein 45013..45378 Mycoplasma putrefaciens KS1 11056367 YP_004789946.1 CDS MPUT_0035 NC_015946.1 45391 45798 D Predicted to contain 1 transmembrane domain that resembles a lipoprotein signal sequence.; hypothetical protein 45391..45798 Mycoplasma putrefaciens KS1 11056368 YP_004789947.1 CDS metG NC_015946.1 46049 47575 D Identified by match to HMM PF09334.5; identified by match to HMM TIGR00398.; methionyl-tRNA synthetase 46049..47575 Mycoplasma putrefaciens KS1 11056369 YP_004789948.1 CDS MPUT_0037 NC_015946.1 47617 48057 D Identified by match to HMM PF00578.15; identified by match to HMM TIGR03137.; AhpC/TSA family protein 47617..48057 Mycoplasma putrefaciens KS1 11056370 YP_004789949.1 CDS MPUT_0038 NC_015946.1 48200 48514 D Identified by match to HMM PF08921.5.; hypothetical protein 48200..48514 Mycoplasma putrefaciens KS1 11056371 YP_004789950.1 CDS MPUT_0039 NC_015946.1 48517 49491 D Identified by match to HMM PF01207.11; identified by match to HMM TIGR00737.; putative tRNA dihydrouridine synthetase 48517..49491 Mycoplasma putrefaciens KS1 11056372 YP_004789951.1 CDS lysS NC_015946.1 49496 50998 D Identified by match to HMM PF00152.14; identified by match to HMM TIGR00499.; lysyl-tRNA synthetase 49496..50998 Mycoplasma putrefaciens KS1 11056373 YP_004789952.1 CDS MPUT_0041 NC_015946.1 51091 51477 R Identified by match to HMM PF03610.10; identified by match to HMM TIGR02364.; dihydroxyacetone kinase phosphotransfer subunit complement(51091..51477) Mycoplasma putrefaciens KS1 11056374 YP_004789953.1 CDS MPUT_0042 NC_015946.1 51480 52106 R Identified by match to HMM PF02734.11; identified by match to HMM TIGR02365.; dihydroxyacetone kinase, L subunit complement(51480..52106) Mycoplasma putrefaciens KS1 11056375 YP_004789954.1 CDS dhaK NC_015946.1 52115 53116 R Identified by match to HMM PF02733.11; identified by match to HMM TIGR02363.; dihydroxyacetone kinase, DhaK subunit complement(52115..53116) Mycoplasma putrefaciens KS1 11056376 YP_004789955.1 CDS rpsF NC_015946.1 53414 53827 D Identified by match to HMM PF01250.11; identified by match to HMM TIGR00166.; 30S ribosomal protein S6 53414..53827 Mycoplasma putrefaciens KS1 11056377 YP_004789956.1 CDS ssb NC_015946.1 53845 54306 D Identified by match to HMM PF00436.19; identified by match to HMM TIGR00621.; single-strand DNA-binding protein 53845..54306 Mycoplasma putrefaciens KS1 11056378 YP_004789957.1 CDS rpsR NC_015946.1 54330 54557 D Identified by match to HMM PF01084.14; identified by match to HMM TIGR00165.; 30S ribosomal protein S18 54330..54557 Mycoplasma putrefaciens KS1 11056379 YP_004789958.1 CDS rplI NC_015946.1 54777 55220 D Identified by match to HMM PF01281.13; identified by match to HMM TIGR00158.; 50S ribosomal protein L9 54777..55220 Mycoplasma putrefaciens KS1 11056380 YP_004789959.1 CDS dnaB NC_015946.1 55222 56541 D Identified by match to HMM PF03796.9; identified by match to HMM TIGR00665.; replicative DNA helicase 55222..56541 Mycoplasma putrefaciens KS1 11056381 YP_004789960.1 CDS MPUT_0049 NC_015946.1 56615 57889 D conserved lipoprotein; lipoprotein 56615..57889 Mycoplasma putrefaciens KS1 11056382 YP_004789961.1 CDS MPUT_0050 NC_015946.1 58004 58927 D Identified by match to HMM PF07155.6. Predicted to contain 8 transmembrane domains.; hypothetical protein 58004..58927 Mycoplasma putrefaciens KS1 11056383 YP_004789962.1 CDS cysS NC_015946.1 58946 60268 D Identified by match to HMM PF01406.13; identified by match to HMM TIGR00435.; cysteinyl-tRNA synthetase 58946..60268 Mycoplasma putrefaciens KS1 11056384 YP_004789963.1 CDS MPUT_0052 NC_015946.1 60272 61003 D Identified by match to HMM PF00588.13; identified by match to HMM TIGR00186.; rRNA methyltransferase, TrmH family group 3 protein 60272..61003 Mycoplasma putrefaciens KS1 11056385 YP_004789964.1 CDS rpmG-1 NC_015946.1 61066 61227 D Identified by match to HMM PF00471.14; identified by match to HMM TIGR01023.; 50S ribosomal protein L33 61066..61227 Mycoplasma putrefaciens KS1 11056386 YP_004789965.1 CDS secE NC_015946.1 61227 61544 D Identified by match to HMM PF00584.14; identified by match to HMM TIGR00964. Predicted to contain 1 transmembrane domain.; preprotein translocase SecE subunit 61227..61544 Mycoplasma putrefaciens KS1 11056387 YP_004789966.1 CDS nusG NC_015946.1 61569 62198 D Identified by match to HMM PF02357.13; identified by match to HMM TIGR00922.; transcription antitermination protein NusG 61569..62198 Mycoplasma putrefaciens KS1 11056388 YP_004789967.1 CDS rplK NC_015946.1 62403 62831 D Identified by match to HMM PF00298.13; identified by match to HMM TIGR01632.; 50S ribosomal protein L11 62403..62831 Mycoplasma putrefaciens KS1 11056389 YP_004789968.1 CDS rplA NC_015946.1 62831 63511 D Identified by match to HMM PF00687.15; identified by match to HMM TIGR01169.; 50S ribosomal protein L1 62831..63511 Mycoplasma putrefaciens KS1 11056390 YP_004789969.1 CDS MPUT_0058 NC_015946.1 63560 64453 D Identified by match to HMM PF12822.1. Predicted to contain 7 transmembrane domains.; hypothetical protein 63560..64453 Mycoplasma putrefaciens KS1 11056391 YP_004789970.1 CDS rplJ NC_015946.1 64716 65216 D Identified by match to HMM PF00466.14.; 50S ribosomal protein L10 64716..65216 Mycoplasma putrefaciens KS1 11056392 YP_004789971.1 CDS rplL NC_015946.1 65280 65648 D Identified by match to HMM PF00542.13; identified by match to HMM TIGR00855.; 50S ribosomal protein L7/L12 65280..65648 Mycoplasma putrefaciens KS1 11056393 YP_004789972.1 CDS MPUT_0063 NC_015946.1 66738 67892 D hypothetical protein 66738..67892 Mycoplasma putrefaciens KS1 11056396 YP_004789973.1 CDS rpoB NC_015946.1 67914 71780 D Identified by match to HMM PF00562.22; identified by match to HMM TIGR02013.; DNA-directed RNA polymerase subunit beta 67914..71780 Mycoplasma putrefaciens KS1 11056397 YP_004789974.1 CDS rpoC NC_015946.1 71792 75559 D Identified by match to HMM PF04997.6; identified by match to HMM TIGR02386.; DNA-directed RNA polymerase subunit beta' 71792..75559 Mycoplasma putrefaciens KS1 11056398 YP_004789975.1 CDS purA NC_015946.1 75658 76956 D Identified by match to HMM PF00709.15; identified by match to HMM TIGR00184.; adenylosuccinate synthetase 75658..76956 Mycoplasma putrefaciens KS1 11056399 YP_004789976.1 CDS purB NC_015946.1 76949 78244 D Identified by match to HMM PF00206.1; identified by match to HMM TIGR00928.; adenylosuccinate lyase 76949..78244 Mycoplasma putrefaciens KS1 11056400 YP_004789977.1 CDS MPUT_0068 NC_015946.1 78276 78575 R Identified by match to HMM PF00581.14.; hypothetical protein complement(78276..78575) Mycoplasma putrefaciens KS1 11056401 YP_004789978.1 CDS rpiB NC_015946.1 78658 79098 D Identified by match to HMM PF02502.12; identified by match to HMM TIGR00689.; ribose 5-phosphate isomerase B 78658..79098 Mycoplasma putrefaciens KS1 11056402 YP_004789979.1 CDS glyA NC_015946.1 79082 80323 D Identified by match to HMM PF00464.13.; serine hydroxymethyltransferase 79082..80323 Mycoplasma putrefaciens KS1 11056403 YP_004789980.1 CDS upp NC_015946.1 80413 81036 D Identified by match to HMM PF00156.21; identified by match to HMM TIGR01091.; uracil phosphoribosyltransferase 80413..81036 Mycoplasma putrefaciens KS1 11056404 YP_004789981.1 CDS MPUT_0072 NC_015946.1 81436 81882 D Predicted to contain 4 transmembrane domains.; hypothetical protein 81436..81882 Mycoplasma putrefaciens KS1 11056405 YP_004789982.1 CDS atpB NC_015946.1 81888 82778 D Identified by match to HMM PF00119.14; identified by match to HMM TIGR01131. Predicted to contain 5 transmembrane domains.; ATP synthase subunit A 81888..82778 Mycoplasma putrefaciens KS1 11056406 YP_004789983.1 CDS atpE NC_015946.1 82791 83105 D Identified by match to HMM PF00137.15; identified by match to HMM TIGR01260. Predicted to contain 3 transmembrane domains.; ATP synthase subunit C 82791..83105 Mycoplasma putrefaciens KS1 11056407 YP_004789984.1 CDS atpF NC_015946.1 83130 83675 D Identified by match to HMM PF00430.12; identified by match to HMM TIGR01144. Predicted to contain 1 transmembrane domain.; ATP synthase subunit B 83130..83675 Mycoplasma putrefaciens KS1 11056408 YP_004789985.1 CDS atpH NC_015946.1 83678 84229 D Identified by match to HMM PF00213.12; identified by match to HMM TIGR01145.; ATP synthase F1 subunit delta 83678..84229 Mycoplasma putrefaciens KS1 11056409 YP_004789986.1 CDS atpA-1 NC_015946.1 84240 85817 D Identified by match to HMM PF00006.19; identified by match to HMM TIGR00962.; ATP synthase F1 subunit alpha 84240..85817 Mycoplasma putrefaciens KS1 11056410 YP_004789987.1 CDS atpG NC_015946.1 85820 86677 D Identified by match to HMM PF00231.13; identified by match to HMM TIGR01146.; ATP synthase F1 gamma subunit 85820..86677 Mycoplasma putrefaciens KS1 11056411 YP_004789988.1 CDS atpD-1 NC_015946.1 86688 88118 D Identified by match to HMM PF00006.19; identified by match to HMM TIGR01039.; ATP synthase F1 subunit beta 86688..88118 Mycoplasma putrefaciens KS1 11056412 YP_004789989.1 CDS atpC NC_015946.1 88133 88432 D Identified by match to HMM PF02823.10; identified by match to HMM TIGR01216.; ATP synthase F1 epsilon subunit 88133..88432 Mycoplasma putrefaciens KS1 11056413 YP_004789990.1 CDS MPUT_0081 NC_015946.1 88596 89606 D Predicted to contain 3 transmembrane domains.; hypothetical protein 88596..89606 Mycoplasma putrefaciens KS1 11056414 YP_004789991.1 CDS MPUT_0082 NC_015946.1 89659 90708 R Identified by match to HMM PF02739.10; identified by match to HMM TIGR00593.; 5'-3' exonuclease family protein complement(89659..90708) Mycoplasma putrefaciens KS1 11056415 YP_004789992.1 CDS MPUT_0083 NC_015946.1 91101 91454 D predicted lipoprotein with N-terminal signal sequence.; lipoprotein 91101..91454 Mycoplasma putrefaciens KS1 11056416 YP_004789993.1 CDS MPUT_0084 NC_015946.1 91934 92050 R hypothetical protein complement(91934..92050) Mycoplasma putrefaciens KS1 11056417 YP_004789994.1 CDS MPUT_0085 NC_015946.1 92295 92834 D predicted lipoprotein with N-terminal signal sequence.; lipoprotein 92295..92834 Mycoplasma putrefaciens KS1 11056418 YP_004789995.1 CDS MPUT_0086 NC_015946.1 93108 94256 D Predicted to contain 8 transmembrane domains.; hypothetical protein 93108..94256 Mycoplasma putrefaciens KS1 11056419 YP_004789996.1 CDS MPUT_0087 NC_015946.1 94253 94834 R Identified by match to HMM PF01205.13; identified by match to HMM TIGR00257.; hypothetical protein complement(94253..94834) Mycoplasma putrefaciens KS1 11056420 YP_004789997.1 CDS secA NC_015946.1 94907 97741 D Identified by match to HMM PF07517.8; identified by match to HMM TIGR00963.; preprotein translocase subunit SecA 94907..97741 Mycoplasma putrefaciens KS1 11056421 YP_004789998.1 CDS MPUT_0090 NC_015946.1 98543 99298 D Predicted to contain 6 transmembrane domains.; hypothetical protein 98543..99298 Mycoplasma putrefaciens KS1 11056423 YP_004789999.1 CDS uvrB NC_015946.1 99327 101327 D Identified by match to HMM PF12344.2; identified by match to HMM TIGR00631.; excinuclease ABC system subunit B 99327..101327 Mycoplasma putrefaciens KS1 11056424 YP_004790000.1 CDS uvrA NC_015946.1 101338 104172 D Identified by match to HMM TIGR00630.; excinuclease ABC system subunit A 101338..104172 Mycoplasma putrefaciens KS1 11056425 YP_004790001.1 CDS folC NC_015946.1 104172 105302 D Identified by match to HMM TIGR01499.; folate synthetase-polyglutamyl folate synthetase 104172..105302 Mycoplasma putrefaciens KS1 11056426 YP_004790002.1 CDS lppA NC_015946.1 106088 107524 D Lipoprotein with similarity to LppA/P72/P67 lipoproteins of the M. mycoides cluster; Lipoprotein LppA 106088..107524 Mycoplasma putrefaciens KS1 11056427 YP_004790003.1 CDS MPUT_0095 NC_015946.1 108572 110437 D Identified by match to HMM PF02378.12; identified by match to HMM TIGR02003. Predicted to contain 10 transmembrane domains.; phosphotransferase system, EIIB family protein 108572..110437 Mycoplasma putrefaciens KS1 11056428 YP_004790004.1 CDS MPUT_0096 NC_015946.1 110421 112685 D Identified by match to HMM PF01055.20.; glycosyl hydrolase family 31 protein 110421..112685 Mycoplasma putrefaciens KS1 11056429 YP_004790005.1 CDS MPUT_0097 NC_015946.1 112832 114967 R conserved lipoprotein; liporotein complement(112832..114967) Mycoplasma putrefaciens KS1 11056430 YP_004790006.1 CDS MPUT_0098 NC_015946.1 115020 115463 R lipoprotein complement(115020..115463) Mycoplasma putrefaciens KS1 11056431 YP_004790007.1 CDS MPUT_0099 NC_015946.1 115709 116278 D Predicted to contain 1 transmembrane domain.; hypothetical protein 115709..116278 Mycoplasma putrefaciens KS1 11056432 YP_004790008.1 CDS MPUT_0100 NC_015946.1 116473 117405 D Identified by match to HMM PF07475.3; identified by match to HMM TIGR00679.; HPr Serine kinase/phosphorylase 116473..117405 Mycoplasma putrefaciens KS1 11056433 YP_004790009.1 CDS lgt-1 NC_015946.1 117426 119012 D Identified by match to HMM PF01790.12; identified by match to HMM TIGR00544. Predicted to contain 7 transmembrane domains.; prolipoprotein diacylglyceryl transferase-1 117426..119012 Mycoplasma putrefaciens KS1 11056434 YP_004790010.1 CDS trxB NC_015946.1 118996 119925 D Identified by match to HMM PF07992.8; identified by match to HMM TIGR01292.; thioredoxin reductase 118996..119925 Mycoplasma putrefaciens KS1 11056435 YP_004790011.1 CDS lgt-2 NC_015946.1 119935 121350 D Identified by match to HMM PF01790.12; identified by match to HMM TIGR00544. Predicted to contain 8 transmembrane domains.; prolipoprotein diacylglyceryl transferase-2 119935..121350 Mycoplasma putrefaciens KS1 11056436 YP_004790012.1 CDS MPUT_0104 NC_015946.1 121362 122294 D Identified by match to HMM PF02650.8; identified by match to HMM TIGR00647; multiple database matches are annotated as transcriptional regulators.; hypothetical protein 121362..122294 Mycoplasma putrefaciens KS1 11056437 YP_004790013.1 CDS secG NC_015946.1 122488 122781 D Identified by match to HMM PF03840.8; identified by match to HMM TIGR00810. Predicted to contain 2 transmembrane domains.; preprotein translocase subunit SecG 122488..122781 Mycoplasma putrefaciens KS1 11056438 YP_004790014.1 CDS rnr NC_015946.1 122825 124939 D Identified by match to HMM PF00773.13; identified by match to HMM TIGR02063.; ribonuclease R 122825..124939 Mycoplasma putrefaciens KS1 11056439 YP_004790015.1 CDS smpB NC_015946.1 124959 125405 D Identified by match to HMM PF01668.12; identified by match to HMM TIGR00086.; ssrA-binding protein 124959..125405 Mycoplasma putrefaciens KS1 11056440 YP_004790016.1 CDS MPUT_0108 NC_015946.1 125405 125935 D Predicted to contain 1 transmembrane domain.; hypothetical protein 125405..125935 Mycoplasma putrefaciens KS1 11056441 YP_004790017.1 CDS MPUT_0109 NC_015946.1 126032 127036 D Identified by match to HMM PF00296.14; identified by match to HMM TIGR03558; putative monooxygenase.; hypothetical protein 126032..127036 Mycoplasma putrefaciens KS1 11056442 YP_004790018.1 CDS gcvH NC_015946.1 127020 127364 D Identified by match to HMM PF01597.13; identified by match to HMM TIGR00527.; glycine cleavage H protein 127020..127364 Mycoplasma putrefaciens KS1 11056443 YP_004790019.1 CDS MPUT_0111 NC_015946.1 127366 128235 D hypothetical protein 127366..128235 Mycoplasma putrefaciens KS1 11056444 YP_004790020.1 CDS lplA NC_015946.1 128213 129247 D Identified by match to HMM PF10437.3; identified by match to HMM TIGR00545.; lipoate protein ligase A 128213..129247 Mycoplasma putrefaciens KS1 11056445 YP_004790021.1 CDS MPUT_0113 NC_015946.1 129250 130428 D Identified by match to HMM PF00724.14.; NADH:flavin oxidoreductase/NADH oxidase family protein 129250..130428 Mycoplasma putrefaciens KS1 11056446 YP_004790022.1 CDS MPUT_0114 NC_015946.1 130460 131257 R Identified by match to HMM PF12697.1; identified by match to HMM TIGR03695.; lipase/esterase family protein complement(130460..131257) Mycoplasma putrefaciens KS1 11056447 YP_004790023.1 CDS MPUT_0115 NC_015946.1 131440 131682 D Predicted to contain 1 transmembrane domain.; hypothetical protein 131440..131682 Mycoplasma putrefaciens KS1 11056448 YP_004790024.1 CDS MPUT_0116 NC_015946.1 132118 132384 D Predicted to contain 2 transmembrane domains.; hypothetical protein 132118..132384 Mycoplasma putrefaciens KS1 11056449 YP_004790025.1 CDS ptsG NC_015946.1 132582 134579 D Identified by match to HMM PF02378.12; identified by match to HMM TIGR02002. Predicted to contain 10 transmembrane domains.; PTS system component, glucose subfamily protein 132582..134579 Mycoplasma putrefaciens KS1 11056450 YP_004790026.1 CDS MPUT_0118 NC_015946.1 134686 135810 D Identified by match to HMM PF00144.18.; beta-lactamase family protein 134686..135810 Mycoplasma putrefaciens KS1 11056451 YP_004790027.1 CDS MPUT_0119 NC_015946.1 135858 136862 D hypothetical protein 135858..136862 Mycoplasma putrefaciens KS1 11056452 YP_004790028.1 CDS deoD NC_015946.1 136917 137567 D Identified by match to HMM PF01048.14; identified by match to HMM TIGR00107.; purine nucleoside phosphorylase 136917..137567 Mycoplasma putrefaciens KS1 11056453 YP_004790029.1 CDS deoA-1 NC_015946.1 137604 138917 R Identified by match to HMM PF07831.7; identified by match to HMM TIGR02644.; pyrimidine-nucleoside phosphorylase complement(137604..138917) Mycoplasma putrefaciens KS1 11056454 YP_004790030.1 CDS MPUT_0122 NC_015946.1 139127 140809 D Identified by match to HMM PF02878.10.; phosphoglucomutase/phosphomannomutase 139127..140809 Mycoplasma putrefaciens KS1 11056455 YP_004790031.1 CDS deoC NC_015946.1 140819 141487 D Identified by match to HMM PF01791.3; identified by match to HMM TIGR00126.; deoxyribose-phosphate aldolase 140819..141487 Mycoplasma putrefaciens KS1 11056456 YP_004790032.1 CDS MPUT_0124 NC_015946.1 141694 142293 D lipoprotein 141694..142293 Mycoplasma putrefaciens KS1 11056457 YP_004790033.1 CDS MPUT_0130 NC_015946.1 147930 148769 D Identified by match to HMM PF08282.6; identified by match to HMM TIGR00099.; haloacid dehalogenase-like hydrolase family protein 147930..148769 Mycoplasma putrefaciens KS1 11056463 YP_004790034.1 CDS trxA NC_015946.1 148785 149093 D Identified by match to HMM PF00085.14; identified by match to HMM TIGR01068.; thioredoxin 148785..149093 Mycoplasma putrefaciens KS1 11056464 YP_004790035.1 CDS MPUT_0132 NC_015946.1 149137 149340 R Identified by match to HMM PF00313.16; identified by match to HMM TIGR02381.; cold shock protein complement(149137..149340) Mycoplasma putrefaciens KS1 11056465 YP_004790036.1 CDS MPUT_0133 NC_015946.1 149508 149906 R Identified by match to HMM PF01042.15; identified by match to HMM TIGR00004.; endoribonuclease L-PSP complement(149508..149906) Mycoplasma putrefaciens KS1 11056466 YP_004790037.1 CDS MPUT_0135 NC_015946.1 151348 152214 D Identified by match to HMM PF08282.6; identified by match to HMM TIGR00099.; hydrolase, HAD superfamily 151348..152214 Mycoplasma putrefaciens KS1 11056468 YP_004790038.1 CDS potB NC_015946.1 153591 154571 D Identified by match to HMM PF00528.16; identified by match to HMM TIGR01581. Predicted to contain 6 transmembrane domains.; spermidine/putrescine ABC transporter permease 153591..154571 Mycoplasma putrefaciens KS1 11056470 YP_004790039.1 CDS potC NC_015946.1 154556 157615 D Identified by match to HMM PF00528.16; identified by match to HMM TIGR03262. Predicted to contain 7 transmembrane domains.; spermidine/putrescine ABC transporter permease and spermidine/putrescine-binding protein 154556..157615 Mycoplasma putrefaciens KS1 11056471 YP_004790040.1 CDS rpsJ NC_015946.1 157806 158114 D Identified by match to HMM PF00338.16; identified by match to HMM TIGR01049.; 30S ribosomal protein S10 157806..158114 Mycoplasma putrefaciens KS1 11056472 YP_004790041.1 CDS rplC NC_015946.1 158195 158878 D Identified by match to HMM PF00297.16; identified by match to HMM TIGR03625.; 50S ribosomal protein L3 158195..158878 Mycoplasma putrefaciens KS1 11056473 YP_004790042.1 CDS rplD NC_015946.1 158895 159521 D Identified by match to HMM PF00573.16; identified by match to HMM TIGR03953.; 50S ribosomal protein L4 158895..159521 Mycoplasma putrefaciens KS1 11056474 YP_004790043.1 CDS rplW NC_015946.1 159521 159811 D Identified by match to HMM PF00276.14; identified by match to HMM TIGR03636.; 50S ribosomal protein L23 159521..159811 Mycoplasma putrefaciens KS1 11056475 YP_004790044.1 CDS rplB NC_015946.1 159877 160719 D Identified by match to HMM PF03947.12; identified by match to HMM TIGR01171.; 50S ribosomal protein L2 159877..160719 Mycoplasma putrefaciens KS1 11056476 YP_004790045.1 CDS rpsS NC_015946.1 160738 161013 D Identified by match to HMM PF00203.15; identified by match to HMM TIGR01050.; 30S ribosomal protein S19 160738..161013 Mycoplasma putrefaciens KS1 11056477 YP_004790046.1 CDS rplV NC_015946.1 161033 161368 D Identified by match to HMM PF00237.13; identified by match to HMM TIGR01044.; 50S ribosomal protein L22 161033..161368 Mycoplasma putrefaciens KS1 11056478 YP_004790047.1 CDS rpsC NC_015946.1 161385 162092 D Identified by match to HMM PF00417.13; identified by match to HMM TIGR01009.; 30S ribosomal protein S3 161385..162092 Mycoplasma putrefaciens KS1 11056479 YP_004790048.1 CDS rplP NC_015946.1 162095 162508 D Identified by match to HMM PF00252.12; identified by match to HMM TIGR01164.; 50S ribosomal protein L16 162095..162508 Mycoplasma putrefaciens KS1 11056480 YP_004790049.1 CDS rpmC NC_015946.1 162508 162942 D Identified by match to HMM PF00831.17; identified by match to HMM TIGR00012.; 50S ribosomal protein L29 162508..162942 Mycoplasma putrefaciens KS1 11056481 YP_004790050.1 CDS rpsQ NC_015946.1 162929 163186 D Identified by match to HMM PF00366.14; identified by match to HMM TIGR03635.; 30S ribosomal protein S17 162929..163186 Mycoplasma putrefaciens KS1 11056482 YP_004790051.1 CDS rplN NC_015946.1 163204 163572 D Identified by match to HMM PF00238.13; identified by match to HMM TIGR01067.; 50S ribosomal protein L14 163204..163572 Mycoplasma putrefaciens KS1 11056483 YP_004790052.1 CDS rplX NC_015946.1 163586 163912 D Identified by match to HMM PF00467.23; identified by match to HMM TIGR01079.; 50S ribosomal protein L24 163586..163912 Mycoplasma putrefaciens KS1 11056484 YP_004790053.1 CDS rplE NC_015946.1 163936 164478 D Identified by match to HMM PF00673.15.; 50S ribosomal protein L5 163936..164478 Mycoplasma putrefaciens KS1 11056485 YP_004790054.1 CDS rpsN NC_015946.1 164500 164685 D Identified by match to HMM PF00253.15.; 30S ribosomal protein S14 164500..164685 Mycoplasma putrefaciens KS1 11056486 YP_004790055.1 CDS rpsH NC_015946.1 164710 165099 D Identified by match to HMM PF00410.13.; 30S ribosomal protein S8 164710..165099 Mycoplasma putrefaciens KS1 11056487 YP_004790056.1 CDS rplF NC_015946.1 165116 165658 D Identified by match to HMM PF00347.17; identified by match to HMM TIGR03654.; 50S ribosomal protein L6 165116..165658 Mycoplasma putrefaciens KS1 11056488 YP_004790057.1 CDS rplR NC_015946.1 165682 166032 D Identified by match to HMM PF00861.16; identified by match to HMM TIGR00060.; 50S ribosomal protein L18 165682..166032 Mycoplasma putrefaciens KS1 11056489 YP_004790058.1 CDS rpsE NC_015946.1 166051 166815 D Identified by match to HMM PF00333.14; identified by match to HMM TIGR01021.; 30S ribosomal protein S5 166051..166815 Mycoplasma putrefaciens KS1 11056490 YP_004790059.1 CDS rplO NC_015946.1 166836 167273 D Identified by match to HMM PF00828.13; identified by match to HMM TIGR01071.; 50S ribosomal protein L15 166836..167273 Mycoplasma putrefaciens KS1 11056491 YP_004790060.1 CDS secY NC_015946.1 167276 168730 D Identified by match to HMM PF00344.14; identified by match to HMM TIGR00967. Predicted to contain 10 transmembrane domains.; preprotein translocase subunit SecY 167276..168730 Mycoplasma putrefaciens KS1 11056492 YP_004790061.1 CDS cdd NC_015946.1 168787 169197 D Identified by match to HMM PF00383.1; identified by match to HMM TIGR01354.; cytidine deaminase 168787..169197 Mycoplasma putrefaciens KS1 11056493 YP_004790062.1 CDS adk NC_015946.1 169309 169947 D Identified by match to HMM PF00406.16; identified by match to HMM TIGR01351.; adenylate kinase 169309..169947 Mycoplasma putrefaciens KS1 11056494 YP_004790063.1 CDS map NC_015946.1 169949 170698 D Identified by match to HMM PF00557.1; identified by match to HMM TIGR00500.; methionine aminopeptidase 169949..170698 Mycoplasma putrefaciens KS1 11056495 YP_004790064.1 CDS infA NC_015946.1 170711 170935 D Identified by match to HMM PF01176.13; identified by match to HMM TIGR00008.; translation initiation factor IF-1 170711..170935 Mycoplasma putrefaciens KS1 11056496 YP_004790065.1 CDS rpmJ NC_015946.1 171019 171132 D Identified by match to HMM PF00444.12; identified by match to HMM TIGR01022.; 50S ribosomal protein L36 171019..171132 Mycoplasma putrefaciens KS1 11056497 YP_004790066.1 CDS rpsM NC_015946.1 171169 171534 D Identified by match to HMM PF00416.16; identified by match to HMM TIGR03631.; 30S ribosomal protein S13 171169..171534 Mycoplasma putrefaciens KS1 11056498 YP_004790067.1 CDS rpsK NC_015946.1 171559 171948 D Identified by match to HMM PF00411.13; identified by match to HMM TIGR03632.; 30S ribosomal protein S11 171559..171948 Mycoplasma putrefaciens KS1 11056499 YP_004790068.1 CDS rpoA NC_015946.1 171953 172906 D Identified by match to HMM PF03118.9; identified by match to HMM TIGR02027.; DNA-directed RNA polymerase subunit alpha 171953..172906 Mycoplasma putrefaciens KS1 11056500 YP_004790069.1 CDS rplQ NC_015946.1 172926 173285 D Identified by match to HMM PF01196.13; identified by match to HMM TIGR00059.; 50S ribosomal protein L17 172926..173285 Mycoplasma putrefaciens KS1 11056501 YP_004790070.1 CDS MPUT_0169 NC_015946.1 173422 174639 D Identified by match to HMM PF00005.21; identified by match to HMM TIGR01166.; putative cobalt ABC transporter ATP-binding protein 173422..174639 Mycoplasma putrefaciens KS1 11056502 YP_004790071.1 CDS MPUT_0170 NC_015946.1 174627 175550 D Identified by match to HMM PF00005.21; identified by match to HMM TIGR01166.; putative cobalt ABC transporter ATP-binding protein 174627..175550 Mycoplasma putrefaciens KS1 11056503 YP_004790072.1 CDS MPUT_0171 NC_015946.1 175557 176570 D Identified by match to HMM PF02361.10; identified by match to HMM TIGR02454. Predicted to contain 5 transmembrane domains.; putative cobalt ABC transporter permease 175557..176570 Mycoplasma putrefaciens KS1 11056504 YP_004790073.1 CDS truA NC_015946.1 176572 177321 D Identified by match to HMM PF01416.14; identified by match to HMM TIGR00071.; tRNA pseudouridine synthase A 176572..177321 Mycoplasma putrefaciens KS1 11056505 YP_004790074.1 CDS rplM NC_015946.1 177698 178153 D Identified by match to HMM PF00572.12; identified by match to HMM TIGR01066.; 50S ribosomal protein L13 177698..178153 Mycoplasma putrefaciens KS1 11056506 YP_004790075.1 CDS rpsI NC_015946.1 178153 178551 D Identified by match to HMM PF00380.13; identified by match to HMM TIGR03627.; 30S ribosomal protein S9 178153..178551 Mycoplasma putrefaciens KS1 11056507 YP_004790076.1 CDS leuS NC_015946.1 178902 181316 D Identified by match to HMM PF00133.16; identified by match to HMM TIGR00396.; leucyl-tRNA synthetase 178902..181316 Mycoplasma putrefaciens KS1 11056509 YP_004790077.1 CDS MPUT_0177 NC_015946.1 181385 183010 D Predicted to contain 8 transmembrane domains.; hypothetical protein 181385..183010 Mycoplasma putrefaciens KS1 11056510 YP_004790078.1 CDS deoA-2 NC_015946.1 183121 184434 D Identified by match to HMM PF07831.71; identified by match to HMM TIGR02644.; pyrimidine-nucleoside phosphorylase 183121..184434 Mycoplasma putrefaciens KS1 11056511 YP_004790079.1 CDS MPUT_0179 NC_015946.1 185628 185765 R hypothetical protein complement(185628..185765) Mycoplasma putrefaciens KS1 11056512 YP_004790080.1 CDS MPUT_0180 NC_015946.1 186277 186405 R hypothetical protein complement(186277..186405) Mycoplasma putrefaciens KS1 11056513 YP_004790081.1 CDS MPUT_0182 NC_015946.1 188024 188773 R Predicted to contain 6 transmembrane domains.; hypothetical protein complement(188024..188773) Mycoplasma putrefaciens KS1 11056515 YP_004790082.1 CDS MPUT_0183 NC_015946.1 188766 189668 R Identified by match to HMM PF00005.21; identified by match to HMM TIGR03522.; ABC transporter ATP-binding protein complement(188766..189668) Mycoplasma putrefaciens KS1 11056516 YP_004790083.1 CDS MPUT_0185 NC_015946.1 189949 191028 D hypothetical protein 189949..191028 Mycoplasma putrefaciens KS1 11056518 YP_004790084.1 CDS MPUT_0186 NC_015946.1 191015 191377 D Predicted to contain 1 transmembrane domain; N-terminal region resembles a lipoprotein signal sequence although the positioning of two Cys residues is atypical; database matches are predicted lipoproteins; putative lipoprotein 191015..191377 Mycoplasma putrefaciens KS1 11056519 YP_004790085.1 CDS MPUT_0187 NC_015946.1 191408 191632 D Identified by match to HMM PF00550.19; identified by match to HMM TIGR00517.; putative acyl carrier protein 191408..191632 Mycoplasma putrefaciens KS1 11056520 YP_004790086.1 CDS MPUT_0188 NC_015946.1 191632 192087 D Identified by match to HMM PF01475.13.; Fur family transcriptional regulator 191632..192087 Mycoplasma putrefaciens KS1 11056521 YP_004790087.1 CDS MPUT_0191 NC_015946.1 192400 193251 R Identified by match to HMM PF02645.10; identified by match to HMM TIGR00762.; DegV family protein complement(192400..193251) Mycoplasma putrefaciens KS1 11056524 YP_004790088.1 CDS MPUT_0192 NC_015946.1 193265 194119 R Identified by match to HMM PF02645.10; identified by match to HMM TIGR00762.; DegV family protein complement(193265..194119) Mycoplasma putrefaciens KS1 11056525 YP_004790089.1 CDS MPUT_0193 NC_015946.1 194189 194797 D Identified by match to HMM PF01588.14; identified by match to HMM TIGR00472.; putative tRNA binding domain-containing protein 194189..194797 Mycoplasma putrefaciens KS1 11056526 YP_004790090.1 CDS pncB NC_015946.1 194775 195839 D Identified by match to HMM PF02749.10; identified by match to HMM TIGR01513.; nicotinate phosphoribosyltransferase 194775..195839 Mycoplasma putrefaciens KS1 11056527 YP_004790091.1 CDS tyrS NC_015946.1 195848 197095 D Identified by match to HMM PF00579.19; identified by match to HMM TIGR00234.; tyrosyl-tRNA synthetase 195848..197095 Mycoplasma putrefaciens KS1 11056528 YP_004790092.1 CDS rpsD NC_015946.1 197408 198031 R Identified by match to HMM PF00163.13; identified by match to HMM TIGR01017.; 30S ribosomal protein S4 complement(197408..198031) Mycoplasma putrefaciens KS1 11056529 YP_004790093.1 CDS MPUT_0197 NC_015946.1 198332 200113 D Predicted to contain 1 transmembrane domain.; hypothetical protein 198332..200113 Mycoplasma putrefaciens KS1 11056530 YP_004790094.1 CDS thiI NC_015946.1 200115 201308 D Identified by match to HMM PF02568.8; identified by match to HMM TIGR00342.; thiamine biosynthesis/tRNA modification protein/ThiI 200115..201308 Mycoplasma putrefaciens KS1 11056531 YP_004790095.1 CDS dnaE NC_015946.1 201328 204309 D Identified by match to HMM PF07733.6; identified by match to HMM TIGR00594.; DNA polymerase III subunit alpha 201328..204309 Mycoplasma putrefaciens KS1 11056532 YP_004790096.1 CDS MPUT_0200 NC_015946.1 204320 207049 D Identified by match to HMM PF00476.14; identified by match to HMM TIGR00593.; DNA polymerase I 204320..207049 Mycoplasma putrefaciens KS1 11056533 YP_004790097.1 CDS mutM NC_015946.1 207059 207886 D Identified by match to HMM PF01149.18; identified by match to HMM TIGR00577.; formamidopyrimidine-DNA glycosylase 207059..207886 Mycoplasma putrefaciens KS1 11056534 YP_004790098.1 CDS MPUT_0202 NC_015946.1 208050 209270 D Identified by match to HMM PF07261.5.; replication initiation and membrane attachment family protein 208050..209270 Mycoplasma putrefaciens KS1 11056535 YP_004790099.1 CDS dnaI NC_015946.1 209280 210212 D Identified by match to HMM PF01695.11; identified by match to HMM TIGR00362.; putative primosomal protein 209280..210212 Mycoplasma putrefaciens KS1 11056536 YP_004790100.1 CDS gap NC_015946.1 210300 211316 D Identified by match to HMM PF02800.14; identified by match to HMM TIGR01534.; glyceraldehyde-3-phosphate dehydrogenase 210300..211316 Mycoplasma putrefaciens KS1 11056537 YP_004790101.1 CDS pgk NC_015946.1 211420 212634 D Identified by match to HMM PF00162.13.; phosphoglycerate kinase 211420..212634 Mycoplasma putrefaciens KS1 11056538 YP_004790102.1 CDS MPUT_0206 NC_015946.1 212722 213498 D hypothetical protein 212722..213498 Mycoplasma putrefaciens KS1 11056539 YP_004790103.1 CDS uhpT NC_015946.1 213548 214990 R Identified by match to HMM PF07672.7. Predicted to contain 12 transmembrane domains.; hexosephosphate transport protein complement(213548..214990) Mycoplasma putrefaciens KS1 11056540 YP_004790104.1 CDS MPUT_0208 NC_015946.1 215160 216137 R Predicted to contain 7 transmembrane domains.; hypothetical protein complement(215160..216137) Mycoplasma putrefaciens KS1 11056541 YP_004790105.1 CDS MPUT_0209 NC_015946.1 216213 218033 R Identified by match to HMM PF00753.21; identified by match to HMM TIGR00649; matches annotated as ribonuclease J or metallo beta lactamase family protein.; hypothetical protein complement(216213..218033) Mycoplasma putrefaciens KS1 11056542 YP_004790106.1 CDS def NC_015946.1 218245 218847 R Identified by match to HMM PF01327.15; identified by match to HMM TIGR00079.; peptide deformylase complement(218245..218847) Mycoplasma putrefaciens KS1 11056543 YP_004790107.1 CDS MPUT_0211 NC_015946.1 218923 219507 D Identified by match to HMM PF03602.9; identified by match to HMM TIGR00095.; putative methyltransferase 218923..219507 Mycoplasma putrefaciens KS1 11056544 YP_004790108.1 CDS gmk NC_015946.1 219497 220396 D Identified by match to HMM PF00625.15; identified by match to HMM TIGR03263.; guanylate kinase 219497..220396 Mycoplasma putrefaciens KS1 11056545 YP_004790109.1 CDS MPUT_0213 NC_015946.1 220383 221642 D Identified by match to HMM PF01189.11; identified by match to HMM TIGR00563.; putative rRNA small subunit methyltransferase B 220383..221642 Mycoplasma putrefaciens KS1 11056546 YP_004790110.1 CDS MPUT_0214 NC_015946.1 221682 223073 D Predicted to contain 1 transmembrane domain.; hypothetical protein 221682..223073 Mycoplasma putrefaciens KS1 11056547 YP_004790111.1 CDS MPUT_0215 NC_015946.1 223123 223887 D Identified by match to HMM PF00481.15.; protein phosphatase 223123..223887 Mycoplasma putrefaciens KS1 11056548 YP_004790112.1 CDS rsgA NC_015946.1 225019 225927 D Identified by match to HMM PF03193.10; identified by match to HMM TIGR00157.; ribosome small subunit-dependent GTPase A 225019..225927 Mycoplasma putrefaciens KS1 11056550 YP_004790113.1 CDS rpe NC_015946.1 225929 226606 D Identified by match to HMM PF00834.13; identified by match to HMM TIGR01163.; ribulose-phosphate 3 epimerase 225929..226606 Mycoplasma putrefaciens KS1 11056551 YP_004790114.1 CDS MPUT_0219 NC_015946.1 226596 227225 D Identified by match to HMM PF04263.10; identified by match to HMM TIGR01378.; thiamine pyrophosphokinase 226596..227225 Mycoplasma putrefaciens KS1 11056552 YP_004790115.1 CDS smc NC_015946.1 227249 230209 R Identified by match to HMM PF02463.13; identified by match to HMM TIGR02168.; chromosome segregation protein SMC complement(227249..230209) Mycoplasma putrefaciens KS1 11056553 YP_004790116.1 CDS rnc NC_015946.1 230335 231027 R Identified by match to HMM PF00636.20; identified by match to HMM TIGR02191.; ribonuclease III complement(230335..231027) Mycoplasma putrefaciens KS1 11056554 YP_004790117.1 CDS plsX NC_015946.1 231014 232021 R Identified by match to HMM PF02504.9; identified by match to HMM TIGR00182.; fatty acid/phospholipid synthesis protein PlsX complement(231014..232021) Mycoplasma putrefaciens KS1 11056555 YP_004790118.1 CDS MPUT_0223 NC_015946.1 232072 233721 R Identified by match to HMM PF02734.11; identified by match to HMM TIGR03599.; dihydroxyacetone kinase 2 domain-containing protein complement(232072..233721) Mycoplasma putrefaciens KS1 11056556 YP_004790119.1 CDS MPUT_0224 NC_015946.1 233743 234060 R Identified by match to HMM PF03780.7.; hypothetical protein complement(233743..234060) Mycoplasma putrefaciens KS1 11056557 YP_004790120.1 CDS rpmB NC_015946.1 234247 234444 D Identified by match to HMM PF00830.13; identified by match to HMM TIGR00009.; 50S ribosomal protein L28 234247..234444 Mycoplasma putrefaciens KS1 11056558 YP_004790121.1 CDS MPUT_0226 NC_015946.1 234673 236670 D Identified by match to HMM PF03382.8; identified by match to HMM TIGR02167. Predicted to contain 1 transmembrane domain and tandem Palindromic Amphipathic Repeat Coding ELements.; PARCEL domain-containing protein 234673..236670 Mycoplasma putrefaciens KS1 11056559 YP_004790122.1 CDS MPUT_0227 NC_015946.1 236960 238987 D Identified by match to HMM PF03382.8; identified by match to HMM TIGR02167. Predicted to contain 1 transmembrane domain and tandem Palindromic Amphipathic Repeat Coding ELements.; PARCEL domain-containing protein 236960..238987 Mycoplasma putrefaciens KS1 11056560 YP_004790123.1 CDS MPUT_0229 NC_015946.1 240982 243249 D Identified by match to HMM PF03382.8; identified by match to HMM TIGR02167. Predicted to contain 1 transmembrane domain and tandem Palindromic Amphipathic Repeat Coding Elements.; PARCEL domain-containing protein 240982..243249 Mycoplasma putrefaciens KS1 11056562 YP_004790124.1 CDS MPUT_0230 NC_015946.1 243520 243675 D hypothetical protein 243520..243675 Mycoplasma putrefaciens KS1 11056563 YP_004790125.1 CDS MPUT_0236 NC_015946.1 250329 252263 D Identified by match to HMM PF03382.8; identified by match to HMM TIGR02167. Predicted to contain 1 transmembrane domain and multiple tandem Palindromic Amphipathic Repeat Coding Elements.; PARCEL domain-containing protein 250329..252263 Mycoplasma putrefaciens KS1 11056569 YP_004790126.1 CDS MPUT_0237 NC_015946.1 253071 254537 D Identified by match to HMM PF03382.8; identified by match to HMM TIGR02167. Predicted to contain 1 transmembrane domain and tandem Palindromic Amphipathic Repeat Coding Elements.; PARCEL domain-containing protein 253071..254537 Mycoplasma putrefaciens KS1 11056570 YP_004790127.1 CDS MPUT_0239 NC_015946.1 256004 257443 R Identified by match to HMM PF03382.8; identified by match to HMM TIGR02167. Predicted to contain 1 transmembrane domain and tandem Palindromic Amphipathic Repeat Coding Elements.; PARCEL domain-containing protein complement(256004..257443) Mycoplasma putrefaciens KS1 11056572 YP_004790128.1 CDS MPUT_0241 NC_015946.1 260059 262317 D Predicted to contain 6 transmembrane domains.; hypothetical protein 260059..262317 Mycoplasma putrefaciens KS1 11056574 YP_004790129.1 CDS MPUT_0242 NC_015946.1 262320 263024 D Identified by match to HMM PF00005.21; identified by match to HMM TIGR01188.; ABC transporter ATP-binding protein 262320..263024 Mycoplasma putrefaciens KS1 11056575 YP_004790130.1 CDS MPUT_0243 NC_015946.1 263002 264417 D single transmembrane domain at N-terminus resembles a lipoprotein signal sequence; putative lipoprotein 263002..264417 Mycoplasma putrefaciens KS1 11056576 YP_004790131.1 CDS MPUT_0244 NC_015946.1 264408 265235 D Predicted to contain 1 transmembrane domain.; hypothetical protein 264408..265235 Mycoplasma putrefaciens KS1 11056577 YP_004790132.1 CDS MPUT_0245 NC_015946.1 265225 266055 D lipoprotein 265225..266055 Mycoplasma putrefaciens KS1 11056578 YP_004790133.1 CDS MPUT_0247 NC_015946.1 266345 266782 D hypothetical protein 266345..266782 Mycoplasma putrefaciens KS1 11056580 YP_004790134.1 CDS pstS NC_015946.1 266955 268157 D Identified by match to HMM PF12849.1; identified by match to HMM TIGR02136. Predicted to contain 1 transmembrane domain.; phosphate ABC transporter substrate-binding protein 266955..268157 Mycoplasma putrefaciens KS1 11056581 YP_004790135.1 CDS pstA NC_015946.1 268232 270334 D Identified by match to HMM PF00528.16; identified by match to HMM TIGR00974. Predicted to contain 12 transmembrane domains.; phosphate ABC transporter permease PstA 268232..270334 Mycoplasma putrefaciens KS1 11056582 YP_004790136.1 CDS pstB NC_015946.1 270334 271149 D Identified by match to HMM PF00005.21; identified by match to HMM TIGR00972.; phosphate ABC transporter ATP-binding protein 270334..271149 Mycoplasma putrefaciens KS1 11056583 YP_004790137.1 CDS phoU NC_015946.1 271159 271821 D Identified by match to HMM PF01895.13; identified by match to HMM TIGR02135.; phosphate transport system regulatory protein PhoU 271159..271821 Mycoplasma putrefaciens KS1 11056584 YP_004790138.1 CDS ftsY NC_015946.1 271896 272966 D Identified by match to HMM PF00448.16; identified by match to HMM TIGR00064.; SRP GTPase/cell division protein FtsY 271896..272966 Mycoplasma putrefaciens KS1 11056585 YP_004790139.1 CDS MPUT_0253 NC_015946.1 272950 273270 D Identified by match to HMM PF04297.8; possible transcriptional regulator; hypothetical protein 272950..273270 Mycoplasma putrefaciens KS1 11056586 YP_004790140.1 CDS MPUT_0254 NC_015946.1 273270 274043 D Identified by match to HMM TIGR00282.; hypothetical protein 273270..274043 Mycoplasma putrefaciens KS1 11056587 YP_004790141.1 CDS metK NC_015946.1 274283 275425 D Identified by match to HMM PF02773.10; identified by match to HMM TIGR01034.; S-adenosylmethionine synthetase 274283..275425 Mycoplasma putrefaciens KS1 11056588 YP_004790142.1 CDS MPUT_0256 NC_015946.1 275425 276096 D Identified by match to HMM PF03932.8.; cutC family protein 275425..276096 Mycoplasma putrefaciens KS1 11056589 YP_004790143.1 CDS MPUT_0257 NC_015946.1 276089 277408 D Identified by match to HMM PF01134.16; identified by match to HMM TIGR00137.; tRNA:m(5)U-54 methyltransferase 276089..277408 Mycoplasma putrefaciens KS1 11056590 YP_004790144.1 CDS manA NC_015946.1 277416 278342 D Identified by match to HMM PF01238.15; identified by match to HMM TIGR00218.; mannose-6-phosphate isomerase 277416..278342 Mycoplasma putrefaciens KS1 11056591 YP_004790145.1 CDS ung NC_015946.1 278335 278994 D Identified by match to HMM PF03167.13; identified by match to HMM TIGR00628.; uracil DNA glycosylase 278335..278994 Mycoplasma putrefaciens KS1 11056592 YP_004790146.1 CDS MPUT_0260 NC_015946.1 279006 279986 D Identified by match to HMM PF01336.19; hypothetical protein 279006..279986 Mycoplasma putrefaciens KS1 11056593 YP_004790147.1 CDS MPUT_0261 NC_015946.1 280040 280435 R Identified by match to HMM PF01230.1.; histidine triad (HIT) protein complement(280040..280435) Mycoplasma putrefaciens KS1 11056594 YP_004790148.1 CDS MPUT_0262 NC_015946.1 280452 282524 R lipoprotein complement(280452..282524) Mycoplasma putrefaciens KS1 11056595 YP_004790149.1 CDS MPUT_0263 NC_015946.1 282547 285303 R liporotein complement(282547..285303) Mycoplasma putrefaciens KS1 11056596 YP_004790150.1 CDS MPUT_0264 NC_015946.1 286313 288361 R lipoprotein complement(286313..288361) Mycoplasma putrefaciens KS1 11056597 YP_004790151.1 CDS MPUT_0265 NC_015946.1 288363 291125 R liporotein complement(288363..291125) Mycoplasma putrefaciens KS1 11056598 YP_004790152.1 CDS MPUT_0266 NC_015946.1 291575 293629 R lipoprotein complement(291575..293629) Mycoplasma putrefaciens KS1 11056599 YP_004790153.1 CDS MPUT_0267 NC_015946.1 293631 296420 R liporotein complement(293631..296420) Mycoplasma putrefaciens KS1 11056600 YP_004790154.1 CDS MPUT_0268 NC_015946.1 296598 297833 D Identified by match to HMM PF00266.1; identified by match to HMM TIGR01979; putative cysteine desulfurase.; aminotransferase class-V family protein 296598..297833 Mycoplasma putrefaciens KS1 11056601 YP_004790155.1 CDS MPUT_0269 NC_015946.1 297837 298280 D Identified by match to HMM PF01592.10; identified by match to HMM TIGR01994.; hypothetical protein 297837..298280 Mycoplasma putrefaciens KS1 11056602 YP_004790156.1 CDS MPUT_0270 NC_015946.1 298267 298833 D Identified by match to HMM PF01812.14; identified by match to HMM TIGR02727.; 5-formyltetrahydrofolate cyclo-ligase 298267..298833 Mycoplasma putrefaciens KS1 11056603 YP_004790157.1 CDS pgiB NC_015946.1 299060 300343 D Identified by match to HMM PF00342.1; identified by match to HMM TIGR02128.; glucose-6-phosphate isomerase 299060..300343 Mycoplasma putrefaciens KS1 11056604 YP_004790158.1 CDS MPUT_0272 NC_015946.1 300432 300914 D Predicted to contain 3 transmembrane domains.; hypothetical protein 300432..300914 Mycoplasma putrefaciens KS1 11056605 YP_004790159.1 CDS MPUT_0273 NC_015946.1 300901 301404 D Identified by match to HMM PF08761.5.; dUTPase family protein 300901..301404 Mycoplasma putrefaciens KS1 11056606 YP_004790160.1 CDS MPUT_0274 NC_015946.1 301419 302186 D Identified by match to HMM PF00588.13; identified by match to HMM TIGR00186.; RNA methyltransferase, TrmH family 301419..302186 Mycoplasma putrefaciens KS1 11056607 YP_004790161.1 CDS MPUT_0279 NC_015946.1 309033 313472 D Identified by match to HMM PF02687.15. Predicted to contain 8 transmembrane domains.; permease family protein 309033..313472 Mycoplasma putrefaciens KS1 11056612 YP_004790162.1 CDS MPUT_0280 NC_015946.1 313555 314172 D hypothetical protein 313555..314172 Mycoplasma putrefaciens KS1 11056613 YP_004790163.1 CDS pheS NC_015946.1 314230 315282 D Identified by match to HMM PF02912.12; identified by match to HMM TIGR00468.; phenylalanyl-tRNA synthetase subunit alpha 314230..315282 Mycoplasma putrefaciens KS1 11056614 YP_004790164.1 CDS pheT NC_015946.1 315295 317676 D Identified by match to HMM PF03484.9; identified by match to HMM TIGR00472.; Phenylalanyl-tRNA synthetase subunit beta 315295..317676 Mycoplasma putrefaciens KS1 11056615 YP_004790165.1 CDS MPUT_0283 NC_015946.1 317676 318197 D hypothetical protein 317676..318197 Mycoplasma putrefaciens KS1 11056616 YP_004790166.1 CDS rpmF NC_015946.1 318216 318395 D Identified by match to HMM PF01783.17; identified by match to HMM TIGR01031.; 50S ribosomal protein L32 318216..318395 Mycoplasma putrefaciens KS1 11056617 YP_004790167.1 CDS mraZ NC_015946.1 318536 318967 D Identified by match to HMM PF02381.12; identified by match to HMM TIGR00242.; cell division protein MraZ 318536..318967 Mycoplasma putrefaciens KS1 11056618 YP_004790168.1 CDS mraW NC_015946.1 318967 319896 D Identified by match to HMM PF01795.13; identified by match to HMM TIGR00006.; S-adenosyl-methyltransferase MraW 318967..319896 Mycoplasma putrefaciens KS1 11056619 YP_004790169.1 CDS MPUT_0287 NC_015946.1 319898 321100 D hypothetical protein 319898..321100 Mycoplasma putrefaciens KS1 11056620 YP_004790170.1 CDS ftsZ NC_015946.1 321179 322303 D Identified by match to HMM PF00091.19; identified by match to HMM TIGR00065.; cell division protein FtsZ 321179..322303 Mycoplasma putrefaciens KS1 11056621 YP_004790171.1 CDS MPUT_0289 NC_015946.1 322314 322763 D hypothetical protein 322314..322763 Mycoplasma putrefaciens KS1 11056622 YP_004790172.1 CDS MPUT_0290 NC_015946.1 322909 324258 D Identified by match to HMM PF01546.22; identified by match to HMM TIGR01887.; putative dipeptidase 322909..324258 Mycoplasma putrefaciens KS1 11056623 YP_004790173.1 CDS rpsB NC_015946.1 324554 325459 D Identified by match to HMM PF00318.14; identified by match to HMM TIGR01011.; 30S ribosomal protein S2 324554..325459 Mycoplasma putrefaciens KS1 11056624 YP_004790174.1 CDS tsf NC_015946.1 325490 326380 D Identified by match to HMM PF00889.13; identified by match to HMM TIGR00116.; translation elongation factor Ts 325490..326380 Mycoplasma putrefaciens KS1 11056625 YP_004790175.1 CDS MPUT_0293 NC_015946.1 326386 326976 D Predicted to contain 3 transmembrane domains.; hypothetical protein 326386..326976 Mycoplasma putrefaciens KS1 11056626 YP_004790176.1 CDS pyrH NC_015946.1 327179 327892 D Identified by match to HMM PF00696.22; identified by match to HMM TIGR02075.; UMP kinase 327179..327892 Mycoplasma putrefaciens KS1 11056627 YP_004790177.1 CDS frr NC_015946.1 327903 328451 D Identified by match to HMM PF01765.13; identified by match to HMM TIGR00496.; ribosome recycling factor 327903..328451 Mycoplasma putrefaciens KS1 11056628 YP_004790178.1 CDS argS NC_015946.1 328465 330126 D Identified by match to HMM PF00750.13; identified by match to HMM TIGR00456.; arginyl-tRNA synthetase 328465..330126 Mycoplasma putrefaciens KS1 11056629 YP_004790179.1 CDS MPUT_0297 NC_015946.1 330231 330830 D Identified by match to HMM PF01725.10; identified by match to HMM TIGR00042.; Nucleoside-triphosphatase 330231..330830 Mycoplasma putrefaciens KS1 11056630 YP_004790180.1 CDS MPUT_0298 NC_015946.1 330840 331388 D Identified by match to HMM PF00588.13; identified by match to HMM TIGR00185.; RNA methyltransferase, TrmH family 330840..331388 Mycoplasma putrefaciens KS1 11056631 YP_004790181.1 CDS MPUT_0299 NC_015946.1 331388 332242 D Identified by match to HMM PF08282.6; identified by match to HMM TIGR00099.; HAD-superfamily hydrolase 331388..332242 Mycoplasma putrefaciens KS1 11056632 YP_004790182.1 CDS MPUT_0300 NC_015946.1 332254 333987 D Predicted to contain 2 transmembrane domains.; hypothetical protein 332254..333987 Mycoplasma putrefaciens KS1 11056633 YP_004790183.1 CDS MPUT_0301 NC_015946.1 334037 334705 D Identified by match to HMM PF04011.6, putative LemA family protein. Predicted to contain 1 transmembrane domain.; hypothetical protein 334037..334705 Mycoplasma putrefaciens KS1 11056634 YP_004790184.1 CDS megL NC_015946.1 334832 336016 D Identified by match to HMM PF01053.14; identified by match to HMM TIGR01328.; methionine gamma-lyase 334832..336016 Mycoplasma putrefaciens KS1 11056635 YP_004790185.1 CDS clpB NC_015946.1 336166 338307 D Identified by match to HMM PF07724.8; identified by match to HMM TIGR03346.; ATP dependent protease ClpB 336166..338307 Mycoplasma putrefaciens KS1 11056636 YP_004790186.1 CDS hrcA NC_015946.1 338316 339347 D Identified by match to HMM PF01628.15; identified by match to HMM TIGR00331.; heat-inducible transcription repressor HrcA 338316..339347 Mycoplasma putrefaciens KS1 11056637 YP_004790187.1 CDS grpE NC_015946.1 339322 339903 D Identified by match to HMM PF01025.13.; molecular chaperone GrpE 339322..339903 Mycoplasma putrefaciens KS1 11056638 YP_004790188.1 CDS dnaK NC_015946.1 339948 341729 D Identified by match to HMM PF00012.14; identified by match to HMM TIGR02350.; chaperone protein DnaK 339948..341729 Mycoplasma putrefaciens KS1 11056639 YP_004790189.1 CDS dnaJ NC_015946.1 341788 342900 D Identified by match to HMM PF00226.25; identified by match to HMM TIGR02349.; chaperone protein DnaJ 341788..342900 Mycoplasma putrefaciens KS1 11056640 YP_004790190.1 CDS MPUT_0308 NC_015946.1 343018 343983 D Identified by match to HMM PF01368.14, putative phosphoesterase; DHH family protein 343018..343983 Mycoplasma putrefaciens KS1 11056641 YP_004790191.1 CDS MPUT_0309 NC_015946.1 343976 345445 D Identified by match to HMM PF07690.10; identified by match to HMM TIGR00881. Predicted to contain 12 transmembrane domains. Best database matches are annotated as glycerol-3-phosphate transporters; Major Facilitator Superfamily protein 343976..345445 Mycoplasma putrefaciens KS1 11056642 YP_004790192.1 CDS mnmA NC_015946.1 345794 346915 D Identified by match to HMM PF03054.1; identified by match to HMM TIGR00420.; tRNA-specific 2-thiouridylase mnmA 345794..346915 Mycoplasma putrefaciens KS1 11056643 YP_004790193.1 CDS MPUT_0311 NC_015946.1 346966 347580 D Predicted to contain 1 transmembrane domain.; hypothetical protein 346966..347580 Mycoplasma putrefaciens KS1 11056644 YP_004790194.1 CDS MPUT_0312 NC_015946.1 347679 349805 D Identified by match to PF11074.2.; hypothetical protein 347679..349805 Mycoplasma putrefaciens KS1 11056645 YP_004790195.1 CDS fmt NC_015946.1 349792 350775 D Identified by match to HMM PF00551.13; identified by match to HMM TIGR00460.; methionyl-tRNA formyltransferase 349792..350775 Mycoplasma putrefaciens KS1 11056646 YP_004790196.1 CDS efp NC_015946.1 350865 351419 D Identified by match to HMM PF09285.5; identified by match to HMM TIGR00038.; translation elongation factor P 350865..351419 Mycoplasma putrefaciens KS1 11056647 YP_004790197.1 CDS MPUT_0315 NC_015946.1 351436 351735 D hypothetical protein 351436..351735 Mycoplasma putrefaciens KS1 11056648 YP_004790198.1 CDS tig NC_015946.1 351755 353041 D Identified by match to HMM PF05697.7; identified by match to HMM TIGR00115.; trigger factor 351755..353041 Mycoplasma putrefaciens KS1 11056649 YP_004790199.1 CDS lon NC_015946.1 353177 355522 D Identified by match to HMM PF05362.1; identified by match to HMM TIGR00763.; ATP-dependent protease La 353177..355522 Mycoplasma putrefaciens KS1 11056650 YP_004790200.1 CDS MPUT_0318 NC_015946.1 355715 356956 D Identified by match to HMM PF12002.2; identified by match to HMM TIGR02397.; ATPase, AAA family protein 355715..356956 Mycoplasma putrefaciens KS1 11056651 YP_004790201.1 CDS MPUT_0319 NC_015946.1 356991 359480 R lipoprotein complement(356991..359480) Mycoplasma putrefaciens KS1 11056652 YP_004790202.1 CDS MPUT_0320 NC_015946.1 359641 364950 D Identified by match to HMM PF02687.15. Predicted to contain 8 transmembrane domains.; permease family protein 359641..364950 Mycoplasma putrefaciens KS1 11056653 YP_004790203.1 CDS MPUT_0321 NC_015946.1 365019 365570 D Identified by match to HMM PF01965.1; identified by match to HMM TIGR01383.; DJ-1/PfpI family protein 365019..365570 Mycoplasma putrefaciens KS1 11056654 YP_004790204.1 CDS MPUT_0322 NC_015946.1 365601 367433 D Identified by match to HMM PF03412.1. Predicted to contain 5 transmembrane domains.; peptidase C39 family domain-containing protein 365601..367433 Mycoplasma putrefaciens KS1 11056655 YP_004790205.1 CDS MPUT_0323 NC_015946.1 367461 367970 D Identified by match to HMM PF02130.11; identified by match to HMM TIGR00043.; metallohydrolase 367461..367970 Mycoplasma putrefaciens KS1 11056656 YP_004790206.1 CDS era NC_015946.1 367960 368868 D Identified by match to HMM PF01926.17; identified by match to HMM TIGR00436.; GTP-binding protein Era 367960..368868 Mycoplasma putrefaciens KS1 11056657 YP_004790207.1 CDS recO NC_015946.1 368868 369653 D Identified by match to HMM PF11967.2; identified by match to HMM TIGR00613.; DNA repair protein RecO 368868..369653 Mycoplasma putrefaciens KS1 11056658 YP_004790208.1 CDS glyS NC_015946.1 369750 371123 D Identified by match to HMM PF00587.19; identified by match to HMM TIGR00389.; glycyl-tRNA synthetase 369750..371123 Mycoplasma putrefaciens KS1 11056659 YP_004790209.1 CDS dnaG NC_015946.1 371133 372941 D Identified by match to HMM PF08275.5; identified by match to HMM TIGR01391.; DNA primase 371133..372941 Mycoplasma putrefaciens KS1 11056660 YP_004790210.1 CDS rpoD NC_015946.1 372953 374395 D Identified by match to HMM PF04539.10; identified by match to HMM TIGR02393.; RNA polymerase sigma factor 372953..374395 Mycoplasma putrefaciens KS1 11056661 YP_004790211.1 CDS MPUT_0329 NC_015946.1 374397 375074 D Identified by match to HMM PF04816.6.; hypothetical protein 374397..375074 Mycoplasma putrefaciens KS1 11056662 YP_004790212.1 CDS MPUT_0330 NC_015946.1 375061 375852 D Identified by match to HMM PF01784.12; identified by match to HMM TIGR00486.; hypothetical protein 375061..375852 Mycoplasma putrefaciens KS1 11056663 YP_004790213.1 CDS MPUT_0331 NC_015946.1 375855 377225 D Identified by match to HMM PF00270.23; identified by match to HMM TIGR01389.; DEAD-box ATP-dependent RNA helicase 375855..377225 Mycoplasma putrefaciens KS1 11056664 YP_004790214.1 CDS MPUT_0332 NC_015946.1 377424 379613 D Predicted to contain 1 transmembrane domain.; hypothetical protein 377424..379613 Mycoplasma putrefaciens KS1 11056665 YP_004790215.1 CDS MPUT_0333 NC_015946.1 379647 382205 D lipoprotein 379647..382205 Mycoplasma putrefaciens KS1 11056666 YP_004790216.1 CDS MPUT_0334 NC_015946.1 382605 384797 D Predicted to contain 1 transmembrane domain.; hypothetical protein 382605..384797 Mycoplasma putrefaciens KS1 11056667 YP_004790217.1 CDS MPUT_0335 NC_015946.1 384827 387388 D lipoprotein 384827..387388 Mycoplasma putrefaciens KS1 11056668 YP_004790218.1 CDS MPUT_0336 NC_015946.1 387443 388876 D Predicted to contain 12 transmembrane domains.; hypothetical protein 387443..388876 Mycoplasma putrefaciens KS1 11056669 YP_004790219.1 CDS MPUT_0337 NC_015946.1 388890 389387 D Identified by match to HMM PF10896.2.; hypothetical protein 388890..389387 Mycoplasma putrefaciens KS1 11056670 YP_004790220.1 CDS MPUT_0338 NC_015946.1 389387 390286 D hypothetical protein 389387..390286 Mycoplasma putrefaciens KS1 11056671 YP_004790221.1 CDS MPUT_0339 NC_015946.1 390296 390766 D hypothetical protein 390296..390766 Mycoplasma putrefaciens KS1 11056672 YP_004790222.1 CDS MPUT_0340 NC_015946.1 390753 392957 D Predicted to contain 2 transmembrane domains.; hypothetical protein 390753..392957 Mycoplasma putrefaciens KS1 11056673 YP_004790223.1 CDS atpA-2 NC_015946.1 392962 394515 D Identified by match to HMM PF00006.19; identified by match to HMM TIGR00962.; ATP synthase F1 subunit alpha 392962..394515 Mycoplasma putrefaciens KS1 11056674 YP_004790224.1 CDS atpD-2 NC_015946.1 394515 395894 D Identified by match to HMM PF00006.19; identified by match to HMM TIGR01039.; ATP synthase F1 subunit beta 394515..395894 Mycoplasma putrefaciens KS1 11056675 YP_004790225.1 CDS MPUT_0343 NC_015946.1 396130 397662 D Identified by match to HMM PF02588.9. Predicted to contain 5 transmembrane domains.; hypothetical protein 396130..397662 Mycoplasma putrefaciens KS1 11056676 YP_004790226.1 CDS MPUT_0344 NC_015946.1 397754 401812 D Identified by match to HMM TIGR00916. Predicted to contain 12 transmembrane domains.; hypothetical protein 397754..401812 Mycoplasma putrefaciens KS1 11056677 YP_004790227.1 CDS apt NC_015946.1 401828 402340 D Identified by match to HMM PF00156.21; identified by match to HMM TIGR01090.; adenine phosphoribosyltransferase 401828..402340 Mycoplasma putrefaciens KS1 11056678 YP_004790228.1 CDS MPUT_0346 NC_015946.1 402402 404660 D Identified by match to HMM PF04607.11; identified by match to HMM TIGR00691.; RelA/SpoT family protein 402402..404660 Mycoplasma putrefaciens KS1 11056679 YP_004790229.1 CDS MPUT_0347 NC_015946.1 404850 405725 D Predicted to contain 5 transmembrane domains.; hypothetical protein 404850..405725 Mycoplasma putrefaciens KS1 11056680 YP_004790230.1 CDS MPUT_0348 NC_015946.1 405831 406136 D Identified by match to HMM PF00436.19.; single-stranded DNA-binding protein 405831..406136 Mycoplasma putrefaciens KS1 11056681 YP_004790231.1 CDS MPUT_0349 NC_015946.1 406140 406913 D Identified by match to HMM PF02481.9; identified by match to HMM TIGR00732.; hypothetical protein 406140..406913 Mycoplasma putrefaciens KS1 11056682 YP_004790232.1 CDS MPUT_0350 NC_015946.1 407057 408931 D Identified by match to HMM PF00005.21; identified by match to HMM TIGR02204. Predicted to contain 6 transmembrane domains.; ABC transporter ATP-binding/permease 407057..408931 Mycoplasma putrefaciens KS1 11056683 YP_004790233.1 CDS MPUT_0351 NC_015946.1 408947 410791 D Identified by match to HMM PF00005.21; identified by match to HMM TIGR02204. Predicted to contain 6 transmembrane domains.; ABC transporter ATP-binding/permease 408947..410791 Mycoplasma putrefaciens KS1 11056684 YP_004790234.1 CDS trmFO NC_015946.1 410791 412128 D Identified by match to HMM PF01134.16; identified by match to HMM TIGR00137.; tRNA:m(5)U-54 methyltransferase 410791..412128 Mycoplasma putrefaciens KS1 11056685 YP_004790235.1 CDS MPUT_0353 NC_015946.1 412137 413753 D hypothetical protein 412137..413753 Mycoplasma putrefaciens KS1 11056686 YP_004790236.1 CDS MPUT_0355 NC_015946.1 413948 414700 D hypothetical protein 413948..414700 Mycoplasma putrefaciens KS1 11056688 YP_004790237.1 CDS MPUT_0356 NC_015946.1 414693 415019 D Identified by match to HMM PF09947.3.; hypothetical protein 414693..415019 Mycoplasma putrefaciens KS1 11056689 YP_004790238.1 CDS MPUT_0357 NC_015946.1 415070 416368 D Identified by match to HMM PF01018.16; identified by match to HMM TIGR02729.; GTP-binding protein Obg/CgtA 415070..416368 Mycoplasma putrefaciens KS1 11056690 YP_004790239.1 CDS nadE NC_015946.1 416370 417113 D Identified by match to HMM PF02540.11; identified by match to HMM TIGR00552.; NH(3)-dependent NAD(+) synthetase 416370..417113 Mycoplasma putrefaciens KS1 11056691 YP_004790240.1 CDS MPUT_0359 NC_015946.1 417209 417475 D Predicted to contain 1 transmembrane domain.; hypothetical protein 417209..417475 Mycoplasma putrefaciens KS1 11056692 YP_004790241.1 CDS MPUT_0360 NC_015946.1 417477 418382 D Predicted to contain 5 transmembrane domains.; hypothetical protein 417477..418382 Mycoplasma putrefaciens KS1 11056693 YP_004790242.1 CDS nadD NC_015946.1 418406 419515 D Identified by match to HMM PF01467.1; identified by match to HMM TIGR00482.; nicotinate (nicotinamide) nucleotide adenylyltransferase 418406..419515 Mycoplasma putrefaciens KS1 11056694 YP_004790243.1 CDS mtnN NC_015946.1 419505 420179 D Identified by match to HMM PF01048.14; identified by match to HMM TIGR01704. Predicted to contain 1 transmembrane domain.; MTA/SAH nucleosidase 419505..420179 Mycoplasma putrefaciens KS1 11056695 YP_004790244.1 CDS MPUT_0363 NC_015946.1 420207 421487 R Identified by match to HMM PF03382.8; identified by match to HMM TIGR02167. Predicted to contain 1 transmembrane domain and tandem Palindromic Amphipathic Repeat Coding Elements.; PARCEL domain-containing protein complement(420207..421487) Mycoplasma putrefaciens KS1 11056696 YP_004790245.1 CDS MPUT_0364 NC_015946.1 421661 422305 D Identified by match to HMM PF01712.13; identified by match to HMM TIGR00041.; putative deoxynucleoside kinase 421661..422305 Mycoplasma putrefaciens KS1 11056697 YP_004790246.1 CDS MPUT_0365 NC_015946.1 422338 423039 R Identified by match to HMM PF07314.5; identified by match to HMM TIGR01906. Predicted to contain 4 transmembrane domains.; hypothetical protein complement(422338..423039) Mycoplasma putrefaciens KS1 11056698 YP_004790247.1 CDS MPUT_0366 NC_015946.1 423091 423933 R Identified by match to HMM PF01418.11; putative transcriptional regulator.; helix-turn-helix domain-containing protein complement(423091..423933) Mycoplasma putrefaciens KS1 11056699 YP_004790248.1 CDS MPUT_0367 NC_015946.1 424103 425002 D Identified by match to HMM PF00226.25; identified by match to HMM TIGR02349.; dnaJ domain-containing protein 424103..425002 Mycoplasma putrefaciens KS1 11056700 YP_004790249.1 CDS MPUT_0368 NC_015946.1 425144 425626 D Predicted to contain 4 transmembrane domains.; hypothetical protein 425144..425626 Mycoplasma putrefaciens KS1 11056701 YP_004790250.1 CDS udk NC_015946.1 425726 426358 D Identified by match to HMM PF00485.12; identified by match to HMM TIGR00235.; uridine kinase 425726..426358 Mycoplasma putrefaciens KS1 11056702 YP_004790251.1 CDS MPUT_0371 NC_015946.1 427695 429059 R Identified by match to HMM PF03382.8; identified by match to HMM TIGR02167. Predicted to contain 1 transmembrane domain and tandem Palindromic Amphipathic Repeat Coding Elements.; PARCEL domain-containing protein complement(427695..429059) Mycoplasma putrefaciens KS1 11056704 YP_004790252.1 CDS MPUT_0372 NC_015946.1 430516 431370 D Predicted to contain 6 transmembrane domains.; hypothetical protein 430516..431370 Mycoplasma putrefaciens KS1 11056705 YP_004790253.1 CDS MPUT_0373 NC_015946.1 431382 432527 D Identified by match to HMM PF12697.1.; hypothetical protein 431382..432527 Mycoplasma putrefaciens KS1 11056706 YP_004790254.1 CDS MPUT_0374 NC_015946.1 432585 433433 R Predicted to contain 1 transmembrane domain.; hypothetical protein complement(432585..433433) Mycoplasma putrefaciens KS1 11056707 YP_004790255.1 CDS MPUT_0375 NC_015946.1 433420 434277 R Predicted to contain 1 transmembrane domain.; hypothetical protein complement(433420..434277) Mycoplasma putrefaciens KS1 11056708 YP_004790256.1 CDS MPUT_0376 NC_015946.1 434270 435682 R hypothetical protein complement(434270..435682) Mycoplasma putrefaciens KS1 11056709 YP_004790257.1 CDS MPUT_0377 NC_015946.1 435660 436364 R Identified by match to HMM PF00005.21; identified by match to HMM TIGR01188.; ABC transporter ATP binding protein complement(435660..436364) Mycoplasma putrefaciens KS1 11056710 YP_004790258.1 CDS MPUT_0378 NC_015946.1 436366 438195 R Identified by match to HMM PF12679.1. Predicted to contain 6 transmembrane domains.; ABC transporter permease complement(436366..438195) Mycoplasma putrefaciens KS1 11056711 YP_004790259.1 CDS MPUT_0379 NC_015946.1 438334 439161 R Predicted to contain 3 transmembrane domains.; hypothetical protein complement(438334..439161) Mycoplasma putrefaciens KS1 11056712 YP_004790260.1 CDS MPUT_0380 NC_015946.1 439280 439993 R Identified by match to HMM PF01709.14; identified by match to HMM TIGR01033.; DNA-binding regulatory protein, YebC/PmpR family complement(439280..439993) Mycoplasma putrefaciens KS1 11056713 YP_004790261.1 CDS MPUT_0381 NC_015946.1 439971 440630 R Identified by match to HMM PF01712.13; identified by match to HMM TIGR02173.; deoxynucleoside kinase complement(439971..440630) Mycoplasma putrefaciens KS1 11056714 YP_004790262.1 CDS MPUT_0382 NC_015946.1 440675 441430 R Identified by match to HMM PF00849.16; identified by match to HMM TIGR00093.; pseudouridine synthase family protein complement(440675..441430) Mycoplasma putrefaciens KS1 11056715 YP_004790263.1 CDS MPUT_0383 NC_015946.1 441766 442422 R Identified by match to HMM PF00834.13; identified by match to HMM TIGR01163.; ribulose-phosphate 3 epimerase family protein complement(441766..442422) Mycoplasma putrefaciens KS1 11056716 YP_004790264.1 CDS MPUT_0384 NC_015946.1 442422 444248 R Identified by match to HMM PF03611.8. Predicted to contain 11 transmembrane domains.; PTS system IIB subunit complement(442422..444248) Mycoplasma putrefaciens KS1 11056717 YP_004790265.1 CDS MPUT_0385 NC_015946.1 444259 444702 R Identified by match to HMM PF00359.1; PTS system, IIA component complement(444259..444702) Mycoplasma putrefaciens KS1 11056718 YP_004790266.1 CDS MPUT_0387 NC_015946.1 446917 448176 R Identified by match to HMM PF09903.3.; hypothetical protein complement(446917..448176) Mycoplasma putrefaciens KS1 11056720 YP_004790267.1 CDS MPUT_0388 NC_015946.1 448394 449671 D Identified by match to HMM PF03382.8; identified by match to HMM TIGR02167. Predicted to contain 1 transmembrane domain and tandem Palindromic Amphipathic Repeat Coding Elements.; PARCEL domain-containing protein 448394..449671 Mycoplasma putrefaciens KS1 11056721 YP_004790268.1 CDS scpB NC_015946.1 449954 450562 R Identified by match to HMM PF04079.10; identified by match to HMM TIGR00281.; segregation and condensation protein B complement(449954..450562) Mycoplasma putrefaciens KS1 11056722 YP_004790269.1 CDS scpA NC_015946.1 450549 451394 R Identified by match to HMM PF02616.8.; Segregation and condensation protein A complement(450549..451394) Mycoplasma putrefaciens KS1 11056723 YP_004790270.1 CDS MPUT_0391 NC_015946.1 451412 452251 R hypothetical protein complement(451412..452251) Mycoplasma putrefaciens KS1 11056724 YP_004790271.1 CDS MPUT_0392 NC_015946.1 452263 452853 R hypothetical protein complement(452263..452853) Mycoplasma putrefaciens KS1 11056725 YP_004790272.1 CDS MPUT_0393 NC_015946.1 452856 454352 R Predicted to contain 13 transmembrane domains.; hypothetical protein complement(452856..454352) Mycoplasma putrefaciens KS1 11056726 YP_004790273.1 CDS ppa NC_015946.1 454523 455086 R Identified by match to HMM PF00719.13.; inorganic pyrophosphatase complement(454523..455086) Mycoplasma putrefaciens KS1 11056727 YP_004790274.1 CDS MPUT_0395 NC_015946.1 455205 456101 D Predicted to contain 5 transmembrane domains.; hypothetical protein 455205..456101 Mycoplasma putrefaciens KS1 11056728 YP_004790275.1 CDS MPUT_0396 NC_015946.1 456329 457672 D Identified by match to HMM PF06646.5; similar to P37 of Mycoplasma hyorhinis. Possible phosphate/phosphonate binding protein or thiamine pyrophosphate-binding protein.; ABC transporter substrate-binding protein 456329..457672 Mycoplasma putrefaciens KS1 11056729 YP_004790276.1 CDS MPUT_0397 NC_015946.1 457656 458414 D Identified by match to HMM PF00005.21; identified by match to HMM TIGR02315. Subunit of Possible phosphate/phosphonate or thiamine pyrophosphate transporter.; ABC transporter ATP binding protein 457656..458414 Mycoplasma putrefaciens KS1 11056730 YP_004790277.1 CDS MPUT_0398 NC_015946.1 458378 460129 D Identified by match to HMM PF00528.16; identified by match to HMM TIGR01097. Predicted to contain 10 transmembrane domains. Subunit of Possible phosphate/phosphonate or thiamine pyrophosphate transporter.; ABC transporter permease 458378..460129 Mycoplasma putrefaciens KS1 11056731 YP_004790278.1 CDS MPUT_0399 NC_015946.1 460265 460960 D Predicted to contain 1 transmembrane domain.; hypothetical protein 460265..460960 Mycoplasma putrefaciens KS1 11056732 YP_004790279.1 CDS cmk NC_015946.1 460976 461644 D Identified by match to HMM PF02224.12; identified by match to HMM TIGR00017.; cytidylate kinase 460976..461644 Mycoplasma putrefaciens KS1 11056733 YP_004790280.1 CDS engA NC_015946.1 461644 462951 D Identified by match to HMM PF01926.17; identified by match to HMM TIGR03594.; GTP-binding protein engA 461644..462951 Mycoplasma putrefaciens KS1 11056734 YP_004790281.1 CDS gpsA NC_015946.1 462955 463947 D Identified by match to HMM PF01210.17; identified by match to HMM TIGR03376.; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 462955..463947 Mycoplasma putrefaciens KS1 11056735 YP_004790282.1 CDS hup-1 NC_015946.1 463972 464250 D Identified by match to HMM PF00216.15; identified by match to HMM TIGR00988.; DNA binding protein HU 463972..464250 Mycoplasma putrefaciens KS1 11056736 YP_004790283.1 CDS MPUT_0404 NC_015946.1 464325 464876 D hypothetical protein 464325..464876 Mycoplasma putrefaciens KS1 11056737 YP_004790284.1 CDS recU NC_015946.1 464848 465357 R Identified by match to HMM PF03838.8; identified by match to HMM TIGR00648.; recombination protein U complement(464848..465357) Mycoplasma putrefaciens KS1 11056738 YP_004790285.1 CDS MPUT_0406 NC_015946.1 465417 465791 D Identified by match to HMM PF05103.7; identified by match to TIGR03544.; DivIVA domain-containing protein 465417..465791 Mycoplasma putrefaciens KS1 11056739 YP_004790286.1 CDS cinA NC_015946.1 466226 466693 D Identified by match to HMM PF02464.11; identified by match to HMM TIGR00199.; competence/damage-inducible protein CinA 466226..466693 Mycoplasma putrefaciens KS1 11056741 YP_004790287.1 CDS recA NC_015946.1 466766 467773 D Identified by match to HMM PF00154.15; identified by match to HMM TIGR02012.; recombinase protein RecA 466766..467773 Mycoplasma putrefaciens KS1 11056742 YP_004790288.1 CDS rnhB NC_015946.1 470008 470637 R Identified by match to HMM PF01351.12; identified by match to HMM TIGR00729.; ribonuclease HII complement(470008..470637) Mycoplasma putrefaciens KS1 11056744 YP_004790289.1 CDS MPUT_0412 NC_015946.1 470631 471581 R Identified by match to HMM PF01926.17; identified by match to HMM TIGR03596.; ribosome biogenesis GTP-binding protein YlqF complement(470631..471581) Mycoplasma putrefaciens KS1 11056745 YP_004790290.1 CDS rplS NC_015946.1 471691 472074 R Identified by match to HMM PF01245.14; identified by match to HMM TIGR01024.; 50S ribosomal protein L19 complement(471691..472074) Mycoplasma putrefaciens KS1 11056746 YP_004790291.1 CDS trmD NC_015946.1 472076 472798 R Identified by match to HMM PF01746.15; identified by match to HMM TIGR00088.; tRNA (guanine-N1)-methyltransferase complement(472076..472798) Mycoplasma putrefaciens KS1 11056747 YP_004790292.1 CDS rimM NC_015946.1 472799 473293 R Identified by match to HMM PF01782.12; identified by match to HMM TIGR02273.; 16S rRNA processing protein RimM complement(472799..473293) Mycoplasma putrefaciens KS1 11056748 YP_004790293.1 CDS rpsP NC_015946.1 473318 473764 R Identified by match to HMM PF00886.13; identified by match to HMM TIGR00002. The M. putrefaciens ORF has a C-terminal extension of approximately 50 amino acid residues compared to other Mycoplasma orthologs.; 30S ribosomal protein S16 complement(473318..473764) Mycoplasma putrefaciens KS1 11056749 YP_004790294.1 CDS MPUT_0417 NC_015946.1 473854 474321 R Identified by match to HMM PF02590.11; identified by match to HMM TIGR00246.; ribosomal RNA large subunit methyltransferase H complement(473854..474321) Mycoplasma putrefaciens KS1 11056750 YP_004790295.1 CDS ffh NC_015946.1 474325 475668 R Identified by match to HMM PF00448.16; identified by match to HMM TIGR00959.; signal recognition particle protein complement(474325..475668) Mycoplasma putrefaciens KS1 11056751 YP_004790296.1 CDS MPUT_0419 NC_015946.1 475743 476174 R Identified by match to HMM PF01700.10.; hypothetical protein complement(475743..476174) Mycoplasma putrefaciens KS1 11056752 YP_004790297.1 CDS MPUT_0420 NC_015946.1 476245 477771 R Identified by match to HMM PF01966.16; identified by match to HMM TIGR03319. Predicted to contain 1 transmembrane domain.; putative phosphodiesterase complement(476245..477771) Mycoplasma putrefaciens KS1 11056753 YP_004790298.1 CDS dinP NC_015946.1 477959 479182 D Identified by match to HMM PF00817.14.; DNA polymerase IV 477959..479182 Mycoplasma putrefaciens KS1 11056754 YP_004790299.1 CDS parC NC_015946.1 479184 481877 R Identified by match to HMM PF00521.1; identified by match to HMM TIGR01061.; DNA topoisomerase IV subunit A complement(479184..481877) Mycoplasma putrefaciens KS1 11056755 YP_004790300.1 CDS parE NC_015946.1 481886 483823 R Identified by match to HMM PF00204.19; identified by match to HMM TIGR01058.; DNA topoisomerase IV subunit B complement(481886..483823) Mycoplasma putrefaciens KS1 11056756 YP_004790301.1 CDS valS NC_015946.1 484131 486746 R Identified by match to HMM PF00133.16; identified by match to HMM TIGR00422.; valyl-tRNA synthetase complement(484131..486746) Mycoplasma putrefaciens KS1 11056757 YP_004790302.1 CDS MPUT_0425 NC_015946.1 486906 489809 R Identified by match to HMM PF00122.14; identified by match to HMM TIGR01522. Predicted to contain 10 transmembrane domains.; cation-transporting ATPase, E1-E2 family complement(486906..489809) Mycoplasma putrefaciens KS1 11056758 YP_004790303.1 CDS ysxC NC_015946.1 489822 490409 R Identified by match to HMM PF01926.17; identified by match to HMM TIGR03598.; ribosome biogenesis GTP-binding protein YsxC/EngB complement(489822..490409) Mycoplasma putrefaciens KS1 11056759 YP_004790304.1 CDS MPUT_0427 NC_015946.1 490414 490998 R Predicted to contain 3 transmembrane domains.; hypothetical protein complement(490414..490998) Mycoplasma putrefaciens KS1 11056760 YP_004790305.1 CDS MPUT_0428 NC_015946.1 490988 491623 R Predicted to contain 1 transmembrane domain.; hypothetical protein complement(490988..491623) Mycoplasma putrefaciens KS1 11056761 YP_004790306.1 CDS MPUT_0429 NC_015946.1 491625 492308 R hypothetical protein complement(491625..492308) Mycoplasma putrefaciens KS1 11056762 YP_004790307.1 CDS MPUT_0430 NC_015946.1 492398 493099 D hypothetical protein 492398..493099 Mycoplasma putrefaciens KS1 11056763 YP_004790308.1 CDS licA NC_015946.1 493112 493825 D Identified by match to HMM PF01636.17; identified by match to HMM TIGR02721.; choline/ethanolamine kinase family protein, LicA 493112..493825 Mycoplasma putrefaciens KS1 11056764 YP_004790309.1 CDS aspS NC_015946.1 493962 495689 R Identified by match to HMM PF00152.14; identified by match to HMM TIGR00459.; aspartyl-tRNA synthetase complement(493962..495689) Mycoplasma putrefaciens KS1 11056765 YP_004790310.1 CDS hisS NC_015946.1 495691 496959 R Identified by match to HMM PF00587.19; identified by match to HMM TIGR00442.; histidyl-tRNA synthetase complement(495691..496959) Mycoplasma putrefaciens KS1 11056766 YP_004790311.1 CDS MPUT_0434 NC_015946.1 497076 499139 D Identified by match to HMM PF00753.21; identified by match to HMM TIGR00361. Predicted to contain 10 transmembrane domains.; metallo-beta-lactamase superfamily protein 497076..499139 Mycoplasma putrefaciens KS1 11056767 YP_004790312.1 CDS rpsT NC_015946.1 499191 499436 R Identified by match to HMM PF01649.12; identified by match to HMM TIGR00029.; 30S ribosomal protein S20 complement(499191..499436) Mycoplasma putrefaciens KS1 11056768 YP_004790313.1 CDS holA NC_015946.1 499646 500596 D Identified by match to HMM PF06144.7; identified by match to HMM TIGR01128.; DNA polymerase III subunit delta 499646..500596 Mycoplasma putrefaciens KS1 11056769 YP_004790314.1 CDS MPUT_0437 NC_015946.1 500598 502028 D Predicted to contain 4 transmembrane domains.; hypothetical protein 500598..502028 Mycoplasma putrefaciens KS1 11056770 YP_004790315.1 CDS MPUT_0438 NC_015946.1 502142 502726 D hypothetical protein 502142..502726 Mycoplasma putrefaciens KS1 11056771 YP_004790316.1 CDS MPUT_0439 NC_015946.1 502773 503057 D hypothetical protein 502773..503057 Mycoplasma putrefaciens KS1 11056772 YP_004790317.1 CDS coaE NC_015946.1 503051 503611 D Identified by match to HMM PF01121.14; identified by match to HMM TIGR00152.; dephospho-CoA kinase 503051..503611 Mycoplasma putrefaciens KS1 11056773 YP_004790318.1 CDS xseB NC_015946.1 503628 503843 R Identified by match to HMM PF02609.10; identified by match to HMM TIGR01280.; exodeoxyribonuclease VII small subunit complement(503628..503843) Mycoplasma putrefaciens KS1 11056774 YP_004790319.1 CDS xseA NC_015946.1 503836 505245 R Identified by match to HMM PF02601.9; identified by match to HMM TIGR00237.; exodeoxyribonuclease VII, large subunit complement(503836..505245) Mycoplasma putrefaciens KS1 11056775 YP_004790320.1 CDS nusB NC_015946.1 505248 505643 R Identified by match to HMM PF01029.12; identified by match to HMM TIGR01951.; transcription antitermination factor NusB complement(505248..505643) Mycoplasma putrefaciens KS1 11056776 YP_004790321.1 CDS MPUT_0444 NC_015946.1 505657 506718 R lipoprotein complement(505657..506718) Mycoplasma putrefaciens KS1 11056777 YP_004790322.1 CDS nfo NC_015946.1 506766 507635 R Identified by match to HMM PF01261.18; identified by match to HMM TIGR00587.; endonuclease IV complement(506766..507635) Mycoplasma putrefaciens KS1 11056778 YP_004790323.1 CDS MPUT_0446 NC_015946.1 507628 508380 R Identified by match to HMM PF01687.11; identified by match to HMM TIGR00083.; riboflavin kinase/FAD synthetase complement(507628..508380) Mycoplasma putrefaciens KS1 11056779 YP_004790324.1 CDS MPUT_0448 NC_015946.1 508587 508889 R Predicted to contain 1 transmembrane domain.; hypothetical protein complement(508587..508889) Mycoplasma putrefaciens KS1 11056781 YP_004790325.1 CDS plsY NC_015946.1 509126 509884 D Identified by match to HMM PF02660.9; identified by match to HMM TIGR00023. Predicted to contain 7 transmembrane domains.; glycerol 3-phosphate acyltransferase 509126..509884 Mycoplasma putrefaciens KS1 11056782 YP_004790326.1 CDS MPUT_0450 NC_015946.1 509976 510224 R Identified by match to HMM PF04246.6. Predicted to contain 1 transmembrane domain.; hypothetical protein complement(509976..510224) Mycoplasma putrefaciens KS1 11056783 YP_004790327.1 CDS tkt NC_015946.1 510245 512233 R Identified by match to HMM PF00456.15; identified by match to HMM TIGR00232. Predicted to contain 2 transmembrane domains.; transketolase complement(510245..512233) Mycoplasma putrefaciens KS1 11056784 YP_004790328.1 CDS MPUT_0452 NC_015946.1 512223 512480 R Identified by match to HMM PF05979.6 (DUF896).; hypothetical protein complement(512223..512480) Mycoplasma putrefaciens KS1 11056785 YP_004790329.1 CDS yqeH NC_015946.1 512524 513615 R Identified by match to HMM TIGR03597.; ribosome biogenesis GTPase YqeH complement(512524..513615) Mycoplasma putrefaciens KS1 11056786 YP_004790330.1 CDS MPUT_0454 NC_015946.1 513646 514578 R hypothetical protein complement(513646..514578) Mycoplasma putrefaciens KS1 11056787 YP_004790331.1 CDS MPUT_0455 NC_015946.1 514671 515477 D hypothetical protein 514671..515477 Mycoplasma putrefaciens KS1 11056788 YP_004790332.1 CDS ruvB NC_015946.1 515485 516417 R Identified by match to HMM PF05496.6; identified by match to HMM TIGR00635.; Holliday junction ATP-dependent DNA helicase RuvB complement(515485..516417) Mycoplasma putrefaciens KS1 11056789 YP_004790333.1 CDS ruvA NC_015946.1 516410 516964 R Identified by match to HMM PF01330.15; identified by match to HMM TIGR00084.; Holliday junction ATP-dependent DNA helicase RuvA complement(516410..516964) Mycoplasma putrefaciens KS1 11056790 YP_004790334.1 CDS rpsU NC_015946.1 517033 517197 R Identified by match to HMM PF01165.14; identified by match to HMM TIGR00030.; 30S ribosomal protein S21 complement(517033..517197) Mycoplasma putrefaciens KS1 11056791 YP_004790335.1 CDS MPUT_0459 NC_015946.1 517269 518894 R hypothetical protein complement(517269..518894) Mycoplasma putrefaciens KS1 11056792 YP_004790336.1 CDS MPUT_0460 NC_015946.1 519037 520614 D Predicted to contain 2 transmembrane domains.; hypothetical protein 519037..520614 Mycoplasma putrefaciens KS1 11056793 YP_004790337.1 CDS MPUT_0461 NC_015946.1 520639 521208 D Predicted to contain 4 transmembrane domains.; hypothetical protein 520639..521208 Mycoplasma putrefaciens KS1 11056794 YP_004790338.1 CDS MPUT_0462 NC_015946.1 521253 523475 R Identified by match to HMM TIGR01448.; RecD/TraA family helicase complement(521253..523475) Mycoplasma putrefaciens KS1 11056795 YP_004790339.1 CDS MPUT_0463 NC_015946.1 523497 524141 R Predicted to contain 4 transmembrane domains.; hypothetical protein complement(523497..524141) Mycoplasma putrefaciens KS1 11056796 YP_004790340.1 CDS MPUT_0464 NC_015946.1 524535 525377 R hypothetical protein complement(524535..525377) Mycoplasma putrefaciens KS1 11056797 YP_004790341.1 CDS rpsO NC_015946.1 525855 526121 R Identified by match to HMM PF00312.16; identified by match to HMM TIGR00952.; 30S ribosomal protein S15 complement(525855..526121) Mycoplasma putrefaciens KS1 11056799 YP_004790342.1 CDS ribF NC_015946.1 526239 526802 R Identified by match to HMM PF06574.6; identified by match to HMM TIGR00083.; riboflavin kinase complement(526239..526802) Mycoplasma putrefaciens KS1 11056800 YP_004790343.1 CDS truB NC_015946.1 526802 527674 R Identified by match to HMM PF01509.1; identified by match to HMM TIGR00431.; tRNA pseudouridine synthase B complement(526802..527674) Mycoplasma putrefaciens KS1 11056801 YP_004790344.1 CDS rbfA NC_015946.1 527722 528075 R Identified by match to HMM PF02033.12; identified by match to HMM TIGR00082.; ribosome-binding factor A complement(527722..528075) Mycoplasma putrefaciens KS1 11056802 YP_004790345.1 CDS infB NC_015946.1 528244 530109 R Identified by match to HMM PF11987.2; identified by match to HMM TIGR00487.; translation initiation factor IF-2 complement(528244..530109) Mycoplasma putrefaciens KS1 11056803 YP_004790346.1 CDS MPUT_0471 NC_015946.1 530136 530435 R Identified by match to HMM PF01248.20.; hypothetical protein complement(530136..530435) Mycoplasma putrefaciens KS1 11056804 YP_004790347.1 CDS MPUT_0472 NC_015946.1 530422 530688 R Identified by match to HMM PF04296.7 (DUF448); hypothetical protein complement(530422..530688) Mycoplasma putrefaciens KS1 11056805 YP_004790348.1 CDS nusA NC_015946.1 530681 532222 R Identified by match to HMM PF08529.5; identified by match to HMM TIGR01953.; transcription termination factor NusA complement(530681..532222) Mycoplasma putrefaciens KS1 11056806 YP_004790349.1 CDS rimP NC_015946.1 532231 532725 R Identified by match to HMM PF02576.11.; ribosome maturation factor RimP complement(532231..532725) Mycoplasma putrefaciens KS1 11056807 YP_004790350.1 CDS MPUT_0475 NC_015946.1 532848 533498 R Identified by match to HMM PF00881.18.; nitroreductase family protein complement(532848..533498) Mycoplasma putrefaciens KS1 11056808 YP_004790351.1 CDS polC NC_015946.1 533512 537963 R Identified by match to HMM PF07733.6; identified by match to HMM TIGR01405.; DNA polymerase III subunit alpha complement(533512..537963) Mycoplasma putrefaciens KS1 11056809 YP_004790352.1 CDS cdsA NC_015946.1 537975 539030 R Identified by match to HMM PF01148.14. Predicted to contain 8 transmembrane domains.; phosphatidate cytidylyltransferase complement(537975..539030) Mycoplasma putrefaciens KS1 11056810 YP_004790353.1 CDS MPUT_0478 NC_015946.1 539137 540213 R Identified by match to HMM PF00557.1; identified by match to HMM TIGR00500.; metallopeptidase M24 family protein complement(539137..540213) Mycoplasma putrefaciens KS1 11056811 YP_004790354.1 CDS rpmG-2 NC_015946.1 540276 540419 R Identified by match to HMM PF00471.14; identified by match to HMM TIGR01023.; 50S ribosomal protein L33 complement(540276..540419) Mycoplasma putrefaciens KS1 11056812 YP_004790355.1 CDS MPUT_0480 NC_015946.1 540836 541948 D lipoprotein 540836..541948 Mycoplasma putrefaciens KS1 11056813 YP_004790356.1 CDS MPUT_0486 NC_015946.1 542578 543177 R hypothetical protein complement(542578..543177) Mycoplasma putrefaciens KS1 11056819 YP_004790357.1 CDS MPUT_0487 NC_015946.1 543266 544285 R Identified by match to HMM PF01553.15; identified by match to HMM TIGR00530.; 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(543266..544285) Mycoplasma putrefaciens KS1 11056820 YP_004790358.1 CDS folA NC_015946.1 544285 544773 R Identified by match to HMM PF00186.13.; dihydrofolate reductase complement(544285..544773) Mycoplasma putrefaciens KS1 11056821 YP_004790359.1 CDS acpS NC_015946.1 544766 545086 R Identified by match to HMM PF01648.14; identified by match to HMM TIGR00556.; holo-[acyl-carrier-protein] synthase complement(544766..545086) Mycoplasma putrefaciens KS1 11056822 YP_004790360.1 CDS dctD NC_015946.1 545230 545709 R Identified by match to HMM PF00383.1; identified by match to HMM TIGR02571.; deoxycytidylate deaminase complement(545230..545709) Mycoplasma putrefaciens KS1 11056823 YP_004790361.1 CDS MPUT_0491 NC_015946.1 545715 547049 R Predicted to contain 7 transmembrane domains.; hypothetical protein complement(545715..547049) Mycoplasma putrefaciens KS1 11056824 YP_004790362.1 CDS MPUT_0492 NC_015946.1 547042 547968 R Identified by match to HMM PF00849.16; identified by match to HMM TIGR00005.; RluA family pseudouridine synthase protein complement(547042..547968) Mycoplasma putrefaciens KS1 11056825 YP_004790363.1 CDS lspA NC_015946.1 547968 548552 R Identified by match to HMM PF01252.12; identified by match to HMM TIGR00077. Predicted to contain 4 transmembrane domains.; signal peptidase II complement(547968..548552) Mycoplasma putrefaciens KS1 11056826 YP_004790364.1 CDS ileS NC_015946.1 548562 551294 R Identified by match to HMM PF00133.16; identified by match to HMM TIGR00392.; isoleucyl-tRNA synthetase complement(548562..551294) Mycoplasma putrefaciens KS1 11056827 YP_004790365.1 CDS MPUT_0495 NC_015946.1 551539 552561 R Identified by match to HMM PF12695.1; identified by match to HMM TIGR00976; putative hydrolase.; hypothetical protein complement(551539..552561) Mycoplasma putrefaciens KS1 11056828 YP_004790366.1 CDS rpmA NC_015946.1 552721 553011 R Identified by match to HMM PF01016.13; identified by match to HMM TIGR00062.; 50S ribosomal protein L27 complement(552721..553011) Mycoplasma putrefaciens KS1 11056829 YP_004790367.1 CDS MPUT_0497 NC_015946.1 553013 553327 R Identified by match to HMM PF04327.6.; hypothetical protein complement(553013..553327) Mycoplasma putrefaciens KS1 11056830 YP_004790368.1 CDS rplU NC_015946.1 553333 553635 R Identified by match to HMM PF00829.15; identified by match to HMM TIGR00061.; 50S ribosomal protein L21 complement(553333..553635) Mycoplasma putrefaciens KS1 11056831 YP_004790369.1 CDS MPUT_0499 NC_015946.1 553780 554223 R Predicted to contain 1 transmembrane domain.; hypothetical protein complement(553780..554223) Mycoplasma putrefaciens KS1 11056832 YP_004790370.1 CDS MPUT_0500 NC_015946.1 554253 555140 R Identified by match to HMM PF00590.14; identified by match to HMM TIGR00096.; S-adenosylmethionine-dependent methyltransferase complement(554253..555140) Mycoplasma putrefaciens KS1 11056833 YP_004790371.1 CDS mtlD NC_015946.1 558326 559312 R Identified by match to HMM PF08125.7; mannitol-1-phosphate 5-dehydrogenase complement(558326..559312) Mycoplasma putrefaciens KS1 11056837 YP_004790372.1 CDS MPUT_0505 NC_015946.1 559313 560110 R Identified by match to HMM PF01418.11.; RpiR family transcriptional regulator complement(559313..560110) Mycoplasma putrefaciens KS1 11056838 YP_004790373.1 CDS MPUT_0509 NC_015946.1 563184 565070 R Predicted to contain 2 transmembrane domains.; hypothetical protein complement(563184..565070) Mycoplasma putrefaciens KS1 11056842 YP_004790374.1 CDS arcC NC_015946.1 565983 566915 R Identified by match to HMM PF00696.22; identified by match to HMM TIGR00746.; carbamate kinase complement(565983..566915) Mycoplasma putrefaciens KS1 11056844 YP_004790375.1 CDS arcB NC_015946.1 567205 568200 R Identified by match to HMM PF00185.1; identified by match to HMM TIGR00658.; ornithine carbamoyltransferase complement(567205..568200) Mycoplasma putrefaciens KS1 11056845 YP_004790376.1 CDS arcA NC_015946.1 568214 569428 R Identified by match to HMM PF02274.11; identified by match to HMM TIGR01078.; arginine deiminase complement(568214..569428) Mycoplasma putrefaciens KS1 11056846 YP_004790377.1 CDS MPUT_0514 NC_015946.1 571003 571923 D Identified by match to HMM PF01656.17; identified by match to HMM TIGR03453. This ORF may be encoded on a remnant of an Integrative Conjugative Element based on presence of downstream ORF and similarity to ORF arrangement in ICEC of Mycoplasma capricolum.; Soj/ParA family protein 571003..571923 Mycoplasma putrefaciens KS1 11056847 YP_004790378.1 CDS MPUT_0515 NC_015946.1 571945 572214 D Identified by match to HMM TIGR00546. Predicted to contain 3 transmembrane domains.; hypothetical protein 571945..572214 Mycoplasma putrefaciens KS1 11056848 YP_004790379.1 CDS adh NC_015946.1 573522 574565 R Identified by match to HMM PF08240.6; identified by match to HMM TIGR03989.; alcohol dehydrogenase complement(573522..574565) Mycoplasma putrefaciens KS1 11056850 YP_004790380.1 CDS MPUT_0518 NC_015946.1 574889 576181 R Identified by match to COG1373; putative ATPase, AAA+ superfamily complement(574889..576181) Mycoplasma putrefaciens KS1 11056851 YP_004790381.1 CDS hsdS-1 NC_015946.1 576404 576913 D Identified by match to HMM PF01420.13.; type I restriction-modification DNA specificity subunit 576404..576913 Mycoplasma putrefaciens KS1 11056852 YP_004790382.1 CDS hsdR NC_015946.1 577855 581025 R Identified by match to HMM PF04313.8; identified by match to HMM TIGR00348.; type I site-specific deoxyribonuclease, HsdR complement(577855..581025) Mycoplasma putrefaciens KS1 11056854 YP_004790383.1 CDS hsdS-2 NC_015946.1 581034 582206 R Identified by match to HMM PF01420.13.; type I restriction modification DNA specificity protein complement(581034..582206) Mycoplasma putrefaciens KS1 11056855 YP_004790384.1 CDS ald NC_015946.1 585351 586469 D Identified by match to HMM PF05222.9; identified by match to HMM TIGR00518.; alanine dehydrogenase 585351..586469 Mycoplasma putrefaciens KS1 11056857 YP_004790385.1 CDS greA NC_015946.1 586531 587004 R Identified by match to HMM PF03449.9; identified by match to HMM TIGR01462.; transcription elongation factor GreA complement(586531..587004) Mycoplasma putrefaciens KS1 11056858 YP_004790386.1 CDS uvrC NC_015946.1 587077 588831 R Identified by match to HMM PF08459.5; identified by match to HMM TIGR00194.; excinuclease ABC, C subunit complement(587077..588831) Mycoplasma putrefaciens KS1 11056859 YP_004790387.1 CDS MPUT_0527 NC_015946.1 588850 589986 R Predicted to contain 5 transmembrane domains.; hypothetical protein complement(588850..589986) Mycoplasma putrefaciens KS1 11056860 YP_004790388.1 CDS MPUT_0528 NC_015946.1 590231 591976 R Identified by match to HMM PF00753.21; identified by match to HMM TIGR00649.; hypothetical protein complement(590231..591976) Mycoplasma putrefaciens KS1 11056861 YP_004790389.1 CDS MPUT_0529 NC_015946.1 592216 592902 R lipoprotein complement(592216..592902) Mycoplasma putrefaciens KS1 11056862 YP_004790390.1 CDS MPUT_0531 NC_015946.1 594597 596732 R Identified by match to HMM PF03382.8; identified by match to HMM TIGR02167. Predicted to contain 1 transmembrane domain and tandem Palindromic Amphipathic Repeat Coding Elements.; PARCEL domain-containing protein complement(594597..596732) Mycoplasma putrefaciens KS1 11056864 YP_004790391.1 CDS MPUT_0532 NC_015946.1 596953 597111 D hypothetical protein 596953..597111 Mycoplasma putrefaciens KS1 11056865 YP_004790392.1 CDS MPUT_0533 NC_015946.1 597822 598415 R lipoprotein complement(597822..598415) Mycoplasma putrefaciens KS1 11056866 YP_004790393.1 CDS MPUT_0534 NC_015946.1 598819 600747 R Identified by match to HMM PF03382.8; identified by match to HMM TIGR02167. Predicted to contain 1 transmembrane domain and tandem Palindromic Amphipathic Repeat Coding Elements.; PARCEL domain-containing protein complement(598819..600747) Mycoplasma putrefaciens KS1 11056867 YP_004790394.1 CDS MPUT_0535 NC_015946.1 600927 601724 R Identified by match to HMM PPF01513.15.; Probable inorganic polyphosphate/ATP-NAD kinase complement(600927..601724) Mycoplasma putrefaciens KS1 11056868 YP_004790395.1 CDS MPUT_0536 NC_015946.1 601806 602525 R Identified by match to HMM PF00106.19; identified by match to HMM TIGR01830.; short chain dehydrogenase family protein complement(601806..602525) Mycoplasma putrefaciens KS1 11056869 YP_004790396.1 CDS MPUT_0537 NC_015946.1 602630 604834 R lipoprotein complement(602630..604834) Mycoplasma putrefaciens KS1 11056870 YP_004790397.1 CDS MPUT_0538 NC_015946.1 604844 605743 R Predicted to contain 6 transmembrane domains.; hypothetical protein complement(604844..605743) Mycoplasma putrefaciens KS1 11056871 YP_004790398.1 CDS trpS NC_015946.1 606022 607035 D Identified by match to HMM PF00579.19; identified by match to HMM TIGR00233.; tryptophanyl-tRNA synthetase 606022..607035 Mycoplasma putrefaciens KS1 11056872 YP_004790399.1 CDS trmFO NC_015946.1 607070 608350 D Identified by match to HMM PF01134.16; identified by match to HMM TIGR00137.; tRNA:m(5)U-54 methyltransferase 607070..608350 Mycoplasma putrefaciens KS1 11056873 YP_004790400.1 CDS fruA NC_015946.1 608383 610788 R Identified by match to HMM PF00359.1; identified by match to HMM TIGR01427. Predicted to contain 10 transmembrane domains.; PTS system fructose specific enzyme IIABC component complement(608383..610788) Mycoplasma putrefaciens KS1 11056874 YP_004790401.1 CDS MPUT_0542 NC_015946.1 610952 611647 D Identified by match to HMM PF04995.8. Predicted to contain 6 transmembrane domains.; hypothetical protein 610952..611647 Mycoplasma putrefaciens KS1 11056875 YP_004790402.1 CDS rplT NC_015946.1 611720 612085 R Identified by match to HMM PF00453.12; identified by match to HMM TIGR01032.; 50S ribosomal protein L20 complement(611720..612085) Mycoplasma putrefaciens KS1 11056876 YP_004790403.1 CDS rpmI NC_015946.1 612106 612300 R Identified by match to HMM PF01632.13; identified by match to HMM TIGR00001.; 50S ribosomal protein L35 complement(612106..612300) Mycoplasma putrefaciens KS1 11056877 YP_004790404.1 CDS infC NC_015946.1 612317 612865 R Identified by match to HMM PF05198.10; identified by match to HMM TIGR00168.; translation initiation factor IF-3 complement(612317..612865) Mycoplasma putrefaciens KS1 11056878 YP_004790405.1 CDS crr NC_015946.1 613333 613803 R Identified by match to HMM PF00358.14; identified by match to HMM TIGR00830.; PTS system, glucose-specific IIA component complement(613333..613803) Mycoplasma putrefaciens KS1 11056879 YP_004790406.1 CDS ptsI NC_015946.1 613936 615660 R Identified by match to HMM PF02896.12; identified by match to HMM TIGR01417.; phosphoenolpyruvate-protein phosphotransferase complement(613936..615660) Mycoplasma putrefaciens KS1 11056880 YP_004790407.1 CDS coaD NC_015946.1 615746 616171 R Identified by match to HMM PF01467.1; identified by match to HMM TIGR01510.; phosphopantetheine adenylyltransferase complement(615746..616171) Mycoplasma putrefaciens KS1 11056881 YP_004790408.1 CDS MPUT_0549 NC_015946.1 616272 619409 R Predicted to contain 1 transmembrane domain.; hypothetical protein complement(616272..619409) Mycoplasma putrefaciens KS1 11056882 YP_004790409.1 CDS MPUT_0550 NC_015946.1 619626 622766 R Predicted to contain 1 transmembrane domain.; hypothetical protein complement(619626..622766) Mycoplasma putrefaciens KS1 11056883 YP_004790410.1 CDS MPUT_0551 NC_015946.1 622975 626130 R Predicted to contain 1 transmembrane domain.; hypothetical protein complement(622975..626130) Mycoplasma putrefaciens KS1 11056884 YP_004790411.1 CDS MPUT_0552 NC_015946.1 626346 629513 R Predicted to contain 1 transmembrane domain.; hypothetical protein complement(626346..629513) Mycoplasma putrefaciens KS1 11056885 YP_004790412.1 CDS MPUT_0553 NC_015946.1 629681 635083 D Identified by match to HMM PF02687.15. Predicted to contain 8 transmembrane domains.; permease family protein 629681..635083 Mycoplasma putrefaciens KS1 11056886 YP_004790413.1 CDS ackA NC_015946.1 636216 637400 R Identified by match to HMM PF00871.11; identified by match to HMM TIGR00016.; acetate kinase complement(636216..637400) Mycoplasma putrefaciens KS1 11056887 YP_004790414.1 CDS pta NC_015946.1 637416 638381 R Identified by match to HMM PF01515.13; identified by match to HMM TIGR00651.; phosphate acetyltransferase complement(637416..638381) Mycoplasma putrefaciens KS1 11056888 YP_004790415.1 CDS pdhD NC_015946.1 638403 640205 R Identified by match to HMM PF07992.8; identified by match to HMM TIGR01350.; dihydrolipoyl dehydrogenase complement(638403..640205) Mycoplasma putrefaciens KS1 11056889 YP_004790416.1 CDS pdhC NC_015946.1 640234 641532 R Identified by match to HMM PF00364.16; identified by match to HMM TIGR01348.; dihydrolipoamide acyltransferase component of pyruvate dehydrogenase complex complement(640234..641532) Mycoplasma putrefaciens KS1 11056890 YP_004790417.1 CDS pdhB NC_015946.1 641551 642540 R Identified by match to COG0022.; pyruvate dehydrogenase E1 component subunit beta complement(641551..642540) Mycoplasma putrefaciens KS1 11056891 YP_004790418.1 CDS pdhA NC_015946.1 642540 643652 R Identified by match to HMM PF00676.14; identified by match to HMM TIGR03181.; pyruvate dehydrogenase E1 component subunit alpha complement(642540..643652) Mycoplasma putrefaciens KS1 11056892 YP_004790419.1 CDS MPUT_0560 NC_015946.1 643677 644678 R Identified by match to HMM PF03099.13; identified by match to HMM TIGR00545.; lipoyltransferase and lipoate-ligase family protein complement(643677..644678) Mycoplasma putrefaciens KS1 11056893 YP_004790420.1 CDS nox NC_015946.1 644684 646042 R Identified by match to HMM PF07992.8; identified by match to HMM TIGR03385.; NADH oxidase complement(644684..646042) Mycoplasma putrefaciens KS1 11056894 YP_004790421.1 CDS MPUT_0562 NC_015946.1 646282 647085 R Predicted to contain 1 transmembrane domain.; hypothetical protein complement(646282..647085) Mycoplasma putrefaciens KS1 11056895 YP_004790422.1 CDS thrS NC_015946.1 647283 649226 R Identified by match to HMM PF00587.19; identified by match to HMM TIGR00418.; threonyl-tRNA synthetase complement(647283..649226) Mycoplasma putrefaciens KS1 11056896 YP_004790423.1 CDS MPUT_0564 NC_015946.1 649521 650885 R Identified by match to HMM PF07992.8; identified by match to HMM TIGR01350.; pyridine nucleotide-disulfide oxidoreductase family protein complement(649521..650885) Mycoplasma putrefaciens KS1 11056897 YP_004790424.1 CDS MPUT_0565 NC_015946.1 651301 651633 D hypothetical protein 651301..651633 Mycoplasma putrefaciens KS1 11056898 YP_004790425.1 CDS MPUT_0566 NC_015946.1 651867 654134 R Identified by match to HMM PF01841.1; putative transglutaminase family protein; lipoprotein complement(651867..654134) Mycoplasma putrefaciens KS1 11056899 YP_004790426.1 CDS pyk NC_015946.1 654307 655743 R Identified by match to HMM PF00224.15; identified by match to HMM TIGR01064.; pyruvate kinase complement(654307..655743) Mycoplasma putrefaciens KS1 11056900 YP_004790427.1 CDS pfkA NC_015946.1 655771 656745 R Identified by match to HMM PF00365.14; identified by match to HMM TIGR02482.; 6-phosphofructokinase complement(655771..656745) Mycoplasma putrefaciens KS1 11056901 YP_004790428.1 CDS MPUT_0569 NC_015946.1 656912 657139 D hypothetical protein 656912..657139 Mycoplasma putrefaciens KS1 11056902 YP_004790429.1 CDS glpO NC_015946.1 657229 658392 D Identified by match to HMM PF01266.18; identified by match to HMM TIGR02352.; glycerol-3-phospate oxidase 657229..658392 Mycoplasma putrefaciens KS1 11056903 YP_004790430.1 CDS glpK NC_015946.1 658405 659913 D Identified by match to HMM PF00370.15; identified by match to HMM TIGR01311.; glycerol kinase 658405..659913 Mycoplasma putrefaciens KS1 11056904 YP_004790431.1 CDS glpF NC_015946.1 659925 660692 D Identified by match to HMM PF00230.14; identified by match to HMM TIGR00861. Predicted to contain 6 transmembrane domains.; glycerol uptake facilitator protein 659925..660692 Mycoplasma putrefaciens KS1 11056905 YP_004790432.1 CDS hpt-2 NC_015946.1 660764 661315 R Identified by match to HMM PF00156.21; identified by match to HMM TIGR01203.; hypoxanthine phosphoribosyltransferase complement(660764..661315) Mycoplasma putrefaciens KS1 11056906 YP_004790433.1 CDS hpt-1 NC_015946.1 661336 661908 R Identified by match to HMM PF00156.21; identified by match to HMM TIGR01203.; hypoxanthine phosphoribosyltransferase complement(661336..661908) Mycoplasma putrefaciens KS1 11056907 YP_004790434.1 CDS MPUT_0575 NC_015946.1 661919 662344 R Identified by match to HMM PF03652.9; identified by match to HMM TIGR00250.; putative Holliday junction resolvase complement(661919..662344) Mycoplasma putrefaciens KS1 11056908 YP_004790435.1 CDS eno NC_015946.1 662488 663843 R Identified by match to HMM PF00113.1; identified by match to HMM TIGR01060.; enolase complement(662488..663843) Mycoplasma putrefaciens KS1 11056909 YP_004790436.1 CDS MPUT_0577 NC_015946.1 663976 666162 R Identified by match to HMM PF01841.1; putative transglutaminase family protein; lipoprotein complement(663976..666162) Mycoplasma putrefaciens KS1 11056910 YP_004790437.1 CDS MPUT_0578 NC_015946.1 666164 666640 R lipoprotein complement(666164..666640) Mycoplasma putrefaciens KS1 11056911 YP_004790438.1 CDS MPUT_0579 NC_015946.1 666814 669516 D Predicted to contain 1 transmembrane domain; identified by match to cd02619 as a C1 Peptidase family protein.; hypothetical protein 666814..669516 Mycoplasma putrefaciens KS1 11056912 YP_004790439.1 CDS typA NC_015946.1 669648 671477 D Identified by match to HMM PF00009.21; identified by match to HMM TIGR01394.; GTP-binding protein TypA/BipA 669648..671477 Mycoplasma putrefaciens KS1 11056913 YP_004790440.1 CDS MPUT_0581 NC_015946.1 671578 672354 R hypothetical protein complement(671578..672354) Mycoplasma putrefaciens KS1 11056914 YP_004790441.1 CDS lepA NC_015946.1 672399 674201 R Identified by match to HMM PF06421.6; identified by match to HMM TIGR01393.; GTP-binding protein LepA complement(672399..674201) Mycoplasma putrefaciens KS1 11056915 YP_004790442.1 CDS MPUT_0583 NC_015946.1 674214 675158 R Identified by match to COG2267; putative lysophospholipase.; hypothetical protein complement(674214..675158) Mycoplasma putrefaciens KS1 11056916 YP_004790443.1 CDS rnhA NC_015946.1 675160 675798 R Identified by match to PF00075.18.; ribonuclease HI complement(675160..675798) Mycoplasma putrefaciens KS1 11056917 YP_004790444.1 CDS proS NC_015946.1 675814 677238 R Identified by match to HMM PF09180.5; identified by match to HMM TIGR00408.; prolyl-tRNA synthetase complement(675814..677238) Mycoplasma putrefaciens KS1 11056918 YP_004790445.1 CDS MPUT_0586 NC_015946.1 677219 677902 R hypothetical protein complement(677219..677902) Mycoplasma putrefaciens KS1 11056919 YP_004790446.1 CDS MPUT_0588 NC_015946.1 679973 680197 R Predicted to contain 2 transmembrane domains.; hypothetical protein complement(679973..680197) Mycoplasma putrefaciens KS1 11056921 YP_004790447.1 CDS MPUT_0589 NC_015946.1 681026 681589 R Identified by match to HMM PF00814.19; identified by match to HMM TIGR03725.; hypothetical protein complement(681026..681589) Mycoplasma putrefaciens KS1 11056922 YP_004790448.1 CDS MPUT_0590 NC_015946.1 681592 682011 R Identified by match to HMM PF02367.11; identified by match to HMM TIGR00150.; ATPase, YjeE family protein complement(681592..682011) Mycoplasma putrefaciens KS1 11056923 YP_004790449.1 CDS mgtA NC_015946.1 682105 684936 R Identified by match to HMM PF00122.14; identified by match to HMM TIGR01524. Predicted to contain 8 transmembrane domains.; magnesium-translocating P-type ATPase complement(682105..684936) Mycoplasma putrefaciens KS1 11056924 YP_004790450.1 CDS lppB-3 NC_015946.1 685390 687177 R possible substrate-binding protein for glycerol ABC transporter.; lipoprotein LppB-3 complement(685390..687177) Mycoplasma putrefaciens KS1 11056925 YP_004790451.1 CDS lppB-2 NC_015946.1 687546 689342 R possible substrate-binding protein for glycerol ABC transporter.; lipoprotein LppB-2 complement(687546..689342) Mycoplasma putrefaciens KS1 11056926 YP_004790452.1 CDS lppB-1 NC_015946.1 689479 691284 R possible substrate-binding protein for glycerol ABC transporter.; lipoprotein LppB-1 complement(689479..691284) Mycoplasma putrefaciens KS1 11056927 YP_004790453.1 CDS gtsC NC_015946.1 691400 692203 R Identified by match to HMM PF00528.16. Predicted to contain 6 transmembrane domains.; glycerol ABC transporter permease subunit C complement(691400..692203) Mycoplasma putrefaciens KS1 11056928 YP_004790454.1 CDS gtsB NC_015946.1 692196 693152 R Predicted to contain 6 transmembrane domains.; glycerol ABC transporter permease subunit B complement(692196..693152) Mycoplasma putrefaciens KS1 11056929 YP_004790455.1 CDS gtsA NC_015946.1 693133 694359 R Identified by match to HMM PF00005.21; identified by match to HMM TIGR03265.; glycerol ABC transporter ATP-binding protein complement(693133..694359) Mycoplasma putrefaciens KS1 11056930 YP_004790456.1 CDS gpmI NC_015946.1 694388 695986 R Identified by match to HMM PF06415.7; identified by match to HMM TIGR01307.; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase complement(694388..695986) Mycoplasma putrefaciens KS1 11056931 YP_004790457.1 CDS MPUT_0599 NC_015946.1 695979 696821 R Identified by match to HMM PF08282.6; identified by match to HMM TIGR00099.; HAD family hydrolase complement(695979..696821) Mycoplasma putrefaciens KS1 11056932 YP_004790458.1 CDS tpiA NC_015946.1 696805 697557 R Identified by match to HMM PF00121.12; identified by match to HMM TIGR00419.; triose-phosphate isomerase complement(696805..697557) Mycoplasma putrefaciens KS1 11056933 YP_004790459.1 CDS MPUT_0611 NC_015946.1 699207 700181 R Identified by match to HMM PF02653.10; predicted to contain 9 transmembrane domains.; putative sugar ABC transporter permease complement(699207..700181) Mycoplasma putrefaciens KS1 11056944 YP_004790460.1 CDS MPUT_0612 NC_015946.1 700184 702778 R Identified by match to HMM PF02653.10; identified by match to HMM TIGR03409. Predicted to contain 9 transmembrane domains.; putative sugar ABC transporter permease complement(700184..702778) Mycoplasma putrefaciens KS1 11056945 YP_004790461.1 CDS MPUT_0613 NC_015946.1 702768 704378 R Identified by match to HMM PF00005.21; identified by match to HMM TIGR02633.; ABC transporter ATP-binding protein complement(702768..704378) Mycoplasma putrefaciens KS1 11056946 YP_004790462.1 CDS MPUT_0614 NC_015946.1 704383 706068 R Identified by match to HMM PF02608.8; putative substrate-binding protein for downstream ABC transporter.; lipoprotein complement(704383..706068) Mycoplasma putrefaciens KS1 11056947 YP_004790463.1 CDS MPUT_0619 NC_015946.1 706788 707552 R Predicted to contain 3 transmembrane domains.; hypothetical protein complement(706788..707552) Mycoplasma putrefaciens KS1 11056952 YP_004790464.1 CDS folD NC_015946.1 707555 708415 R Identified by match to HMM PF02882.13; methylene-tetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase; bifunctional protein folD complement(707555..708415) Mycoplasma putrefaciens KS1 11056953 YP_004790465.1 CDS MPUT_0621 NC_015946.1 708423 710063 R Identified by match to HMM PF02386.10; identified by match to HMM TIGR00933. Predicted to contain 10 transmembrane domains.; cation transport family protein complement(708423..710063) Mycoplasma putrefaciens KS1 11056954 YP_004790466.1 CDS MPUT_0622 NC_015946.1 710146 710832 D Identified by match to HMM PF02254.12; predicted to contain 1 transmembrane domain.; TrkA family potassium uptake protein 710146..710832 Mycoplasma putrefaciens KS1 11056955 YP_004790467.1 CDS gatB NC_015946.1 710867 712309 R Identified by match to HMM PF02934.9; identified by match to HMM TIGR00133.; aspartyl/glutamyl-tRNA(Asn/Gln)amidotransferase subunit B complement(710867..712309) Mycoplasma putrefaciens KS1 11056956 YP_004790468.1 CDS gatA NC_015946.1 712311 713765 R Identified by match to HMM PF01425.15; identified by match to HMM TIGR00132.; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A complement(712311..713765) Mycoplasma putrefaciens KS1 11056957 YP_004790469.1 CDS gatC NC_015946.1 713767 714063 R Identified by match to HMM PF02686.9; identified by match to HMM TIGR00135.; aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C complement(713767..714063) Mycoplasma putrefaciens KS1 11056958 YP_004790470.1 CDS ligA NC_015946.1 714076 716070 R Identified by match to HMM PF01653.1; identified by match to HMM TIGR00575.; DNA ligase, NAD-dependent complement(714076..716070) Mycoplasma putrefaciens KS1 11056959 YP_004790471.1 CDS MPUT_0627 NC_015946.1 716079 718043 R Predicted to contain 14 transmembrane domains.; hypothetical protein complement(716079..718043) Mycoplasma putrefaciens KS1 11056960 YP_004790472.1 CDS MPUT_0628 NC_015946.1 718062 718964 R Identified by match to HMM PF00849.16; identified by match to HMM TIGR00005.; RNA pseudouridylate synthase family protein complement(718062..718964) Mycoplasma putrefaciens KS1 11056961 YP_004790473.1 CDS MPUT_0629 NC_015946.1 718971 719957 R Identified by match to HMM PF02517.10. Predicted to contain 9 transmembrane domains.; CAAX amino terminal protease family protein complement(718971..719957) Mycoplasma putrefaciens KS1 11056962 YP_004790474.1 CDS ptsH NC_015946.1 720009 720278 R Identified by match to HMM PF00381.13; identified by match to HMM TIGR01003.; phosphocarrier protein HPr complement(720009..720278) Mycoplasma putrefaciens KS1 11056963 YP_004790475.1 CDS pcrA NC_015946.1 720346 722526 R Identified by match to HMM PF00580.15; identified by match to HMM TIGR01073.; ATP-dependent DNA helicase PcrA complement(720346..722526) Mycoplasma putrefaciens KS1 11056964 YP_004790476.1 CDS MPUT_0632 NC_015946.1 722516 723352 R Identified by match to HMM PF06271.6. Predicted to contain 4 transmembrane domains.; RDD family protein complement(722516..723352) Mycoplasma putrefaciens KS1 11056965 YP_004790477.1 CDS MPUT_0633 NC_015946.1 723365 724321 R Identified by match to HMM PF00535.20.; glycosyltransferase complement(723365..724321) Mycoplasma putrefaciens KS1 11056966 YP_004790478.1 CDS asnS NC_015946.1 724446 725810 R Identified by match to HMM PF00152.14; identified by match to HMM TIGR00457.; asparaginyl-tRNA synthetase complement(724446..725810) Mycoplasma putrefaciens KS1 11056967 YP_004790479.1 CDS MPUT_0635 NC_015946.1 725816 726661 R Identified by match to HMM PF08282.6; identified by match to HMM TIGR00099.; HAD superfamily hydrolase complement(725816..726661) Mycoplasma putrefaciens KS1 11056968 YP_004790480.1 CDS MPUT_0636 NC_015946.1 726684 727814 R Identified by match to HMM PF12695.1.; alpha/beta hydrolase family protein complement(726684..727814) Mycoplasma putrefaciens KS1 11056969 YP_004790481.1 CDS MPUT_0637 NC_015946.1 727872 728822 R Identified by match to HMM PF00814.19; identified by match to HMM TIGR03723.; tRNA threonylcarbamoyladenosine biosynthesis protein Gcp complement(727872..728822) Mycoplasma putrefaciens KS1 11056970 YP_004790482.1 CDS MPUT_0638 NC_015946.1 729060 730421 D Identified by match to HMM PF00883.15.; cytosol aminopeptidase family protein 729060..730421 Mycoplasma putrefaciens KS1 11056971 YP_004790483.1 CDS MPUT_0639 NC_015946.1 730560 731246 D hypothetical protein 730560..731246 Mycoplasma putrefaciens KS1 11056972 YP_004790484.1 CDS pepF NC_015946.1 731247 733040 D Identified by match to HMM PF01432.14; identified by match to HMM TIGR00181.; oligoendopeptidase F 731247..733040 Mycoplasma putrefaciens KS1 11056973 YP_004790485.1 CDS MPUT_0641 NC_015946.1 733236 734645 R Identified by match to HMM PF03382.8; identified by match to HMM TIGR02167. Predicted to contain 1 transmembrane domain and tandem Palindromic Amphipathic Repeat Coding Elements.; PARCEL domain-containing protein complement(733236..734645) Mycoplasma putrefaciens KS1 11056974 YP_004790486.1 CDS MPUT_0642 NC_015946.1 734849 735736 R Identified by match to HMM PF08282.6; identified by match to HMM TIGR00099.; HAD superfamily hydrolase complement(734849..735736) Mycoplasma putrefaciens KS1 11056975 YP_004790487.1 CDS msrA NC_015946.1 735904 736830 D Identified by match to HMM PF01625.1; identified by match to HMM TIGR00357.; peptide methionine sulfoxide reductase MsrA/MsrB 735904..736830 Mycoplasma putrefaciens KS1 11056976 YP_004790488.1 CDS oppA NC_015946.1 736919 739819 R Identified by match to HMM PF00496.16.; oligopeptide ABC transporter substrate-binding lipoprotein complement(736919..739819) Mycoplasma putrefaciens KS1 11056977 YP_004790489.1 CDS oppF NC_015946.1 739834 741681 R Identified by match to HMM PF00005.21; identified by match to HMM TIGR02769.; Oligopeptide ABC transporter ATP-binding protein complement(739834..741681) Mycoplasma putrefaciens KS1 11056978 YP_004790490.1 CDS oppD NC_015946.1 741684 743381 R Identified by match to HMM PF08352.6; identified by match to HMM TIGR02770.; Oligopeptide ABC transporter ATP-binding component complement(741684..743381) Mycoplasma putrefaciens KS1 11056979 YP_004790491.1 CDS oppC NC_015946.1 743398 744414 R Identified by match to HMM PF12911.1; identified by match to HMM TIGR02790. Predicted to contain 6 transmembrane domains.; Oligopeptide ABC transport system, permease OppC complement(743398..744414) Mycoplasma putrefaciens KS1 11056980 YP_004790492.1 CDS oppB NC_015946.1 744432 745676 R Identified by match to HMM PF00528.16; identified by match to HMM TIGR02789. Predicted to contain 5 transmembrane domains.; Oligopeptide ABC transport system, permease OppB complement(744432..745676) Mycoplasma putrefaciens KS1 11056981 YP_004790493.1 CDS MPUT_0649 NC_015946.1 746012 746512 D Predicted to contain 3 transmembrane domains.; hypothetical protein 746012..746512 Mycoplasma putrefaciens KS1 11056982 YP_004790494.1 CDS alaS NC_015946.1 746612 749302 D Identified by match to HMM PF01411.13; identified by match to HMM TIGR00344.; Alanyl-tRNA synthetase 746612..749302 Mycoplasma putrefaciens KS1 11056983 YP_004790495.1 CDS MPUT_0652 NC_015946.1 750887 753055 R Identified by match to HMM PF01841.1; putative transglutaminase family protein.; lipoprotein complement(750887..753055) Mycoplasma putrefaciens KS1 11056985 YP_004790496.1 CDS MPUT_0653 NC_015946.1 754833 755396 D hypothetical protein 754833..755396 Mycoplasma putrefaciens KS1 11056986 YP_004790497.1 CDS mgtE NC_015946.1 757101 758507 D Identified by match to HMM PF03448.11; identified by match to HMM TIGR00400. Predicted to contain 5 transmembrane domains.; magnesium transporter 757101..758507 Mycoplasma putrefaciens KS1 11056989 YP_004790498.1 CDS trmB NC_015946.1 758523 759185 D Identified by match to HMM PF02390.11; identified by match to HMM TIGR00091.; tRNA (guanine-N(7)-)-methyltransferase 758523..759185 Mycoplasma putrefaciens KS1 11056990 YP_004790499.1 CDS MPUT_0658 NC_015946.1 759318 760133 D Identified by match to HMM PF01418.11; putative HTH-type transcriptional regulator 759318..760133 Mycoplasma putrefaciens KS1 11056991 YP_004790500.1 CDS MPUT_0659 NC_015946.1 760239 761951 D Identified by match to HMM PF02378.12; identified by match to HMM TIGR02004. Predicted to contain 10 transmembrane domains.; PTS system, IIBC component 760239..761951 Mycoplasma putrefaciens KS1 11056992 YP_004790501.1 CDS MPUT_0660 NC_015946.1 761951 762460 D Identified by match to HMM PF00782.14; putative dual specificity phosphatase.; hypothetical protein 761951..762460 Mycoplasma putrefaciens KS1 11056993 YP_004790502.1 CDS MPUT_0661 NC_015946.1 762460 763179 D hypothetical protein 762460..763179 Mycoplasma putrefaciens KS1 11056994 YP_004790503.1 CDS MPUT_0662 NC_015946.1 763229 763456 D Predicted to contain 2 transmembrane domains.; hypothetical protein 763229..763456 Mycoplasma putrefaciens KS1 11056995 YP_004790504.1 CDS MPUT_0663 NC_015946.1 763584 764570 D Identified by match to HMM PF12695.1; predicted to contain 1 transmembrane domain.; putative hydrolase 763584..764570 Mycoplasma putrefaciens KS1 11056996 YP_004790505.1 CDS nrdF NC_015946.1 764719 765738 D Identified by match to HMM PF00268.15. Predicted to contain 1 transmembrane domain.; ribonucleoside-diphosphate reductase subunit beta 764719..765738 Mycoplasma putrefaciens KS1 11056997 YP_004790506.1 CDS nrdI NC_015946.1 765751 766221 D Identified by match to HMM PF07972.5; identified by match to HMM TIGR00333.; ribonucleotide reductase stimulatory protein 765751..766221 Mycoplasma putrefaciens KS1 11056998 YP_004790507.1 CDS nrdE NC_015946.1 766211 768370 D Identified by match to HMM PF02867.1; identified by match to HMM TIGR02506.; ribonucleoside-diphosphate reductase subunit alpha 766211..768370 Mycoplasma putrefaciens KS1 11056999 YP_004790508.1 CDS tuf NC_015946.1 768660 769847 R Identified by match to HMM PF00009.21; identified by match to HMM TIGR00485.; translation elongation factor Tu complement(768660..769847) Mycoplasma putrefaciens KS1 11057000 YP_004790509.1 CDS fusA NC_015946.1 769981 772005 R Identified by match to HMM PF03764.12; identified by match to HMM TIGR00484.; translation elongation factor G complement(769981..772005) Mycoplasma putrefaciens KS1 11057001 YP_004790510.1 CDS rpsG NC_015946.1 772072 772539 R Identified by match to HMM PF00177.15; identified by match to HMM TIGR01029.; 30S ribosomal protein S7 complement(772072..772539) Mycoplasma putrefaciens KS1 11057002 YP_004790511.1 CDS rpsL NC_015946.1 772631 773050 R Identified by match to HMM PF00164.19; identified by match to HMM TIGR00981.; 30S ribosomal protein S12 complement(772631..773050) Mycoplasma putrefaciens KS1 11057003 YP_004790512.1 CDS MPUT_0671 NC_015946.1 773287 773859 R hypothetical protein complement(773287..773859) Mycoplasma putrefaciens KS1 11057004 YP_004790513.1 CDS cls NC_015946.1 773867 775399 R Identified by match to HMM PF00614.16; predicted to contain 3 transmembrane domains.; cardiolipin synthetase complement(773867..775399) Mycoplasma putrefaciens KS1 11057005 YP_004790514.1 CDS MPUT_0673 NC_015946.1 775384 776121 R hypothetical protein complement(775384..776121) Mycoplasma putrefaciens KS1 11057006 YP_004790515.1 CDS MPUT_0674 NC_015946.1 776173 777087 R hypothetical protein complement(776173..777087) Mycoplasma putrefaciens KS1 11057007 YP_004790516.1 CDS MPUT_0675 NC_015946.1 777222 777725 R Identified by match to HMM PF01300.12.; hypothetical protein complement(777222..777725) Mycoplasma putrefaciens KS1 11057008 YP_004790517.1 CDS MPUT_0676 NC_015946.1 777700 779202 R Predicted to contain 8 transmembrane domains.; hypothetical protein complement(777700..779202) Mycoplasma putrefaciens KS1 11057009 YP_004790518.1 CDS MPUT_0677 NC_015946.1 779214 780062 R Identified by match to HMM PF05175.8; identified by match to HMM TIGR03534.; modification methylase, hemK family complement(779214..780062) Mycoplasma putrefaciens KS1 11057010 YP_004790519.1 CDS prfA NC_015946.1 780055 781149 R Identified by match to HMM PF00472.14; identified by match to HMM TIGR00019.; peptide chain release factor 1 complement(780055..781149) Mycoplasma putrefaciens KS1 11057011 YP_004790520.1 CDS tdk NC_015946.1 781153 781779 R Identified by match to HMM PF00265.12.; thymidine kinase complement(781153..781779) Mycoplasma putrefaciens KS1 11057012 YP_004790521.1 CDS MPUT_0680 NC_015946.1 781784 782725 R Identified by match to HMM PF01368.14.; phosphoesterase, DHH family protein complement(781784..782725) Mycoplasma putrefaciens KS1 11057013 YP_004790522.1 CDS MPUT_0681 NC_015946.1 782712 784604 R hypothetical protein complement(782712..784604) Mycoplasma putrefaciens KS1 11057014 YP_004790523.1 CDS rpmE NC_015946.1 784712 784990 R Identified by match to HMM PF01197.12; identified by match to HMM TIGR00105.; 50S ribosomal protein L31 complement(784712..784990) Mycoplasma putrefaciens KS1 11057015 YP_004790524.1 CDS fba NC_015946.1 785264 786154 R Identified by match to HMM PF01116.14; identified by match to HMM TIGR01859.; fructose-1,6-bisphosphate aldolase, class II complement(785264..786154) Mycoplasma putrefaciens KS1 11057016 YP_004790525.1 CDS MPUT_0685 NC_015946.1 787914 788369 R Identified by match to HMM PF05066.7; putative DNA-directed RNA polymerase, delta subunit.; hypothetical protein complement(787914..788369) Mycoplasma putrefaciens KS1 11057018 YP_004790526.1 CDS MPUT_0686 NC_015946.1 788388 789602 R Identified by match to HMM PF01966.16.; HD family phosphohydrolase complement(788388..789602) Mycoplasma putrefaciens KS1 11057019 YP_004790527.1 CDS gltX NC_015946.1 789615 791066 R Identified by match to HMM PF00749.15; identified by match to HMM TIGR00464.; glutamyl-tRNA synthetase complement(789615..791066) Mycoplasma putrefaciens KS1 11057020 YP_004790528.1 CDS topA NC_015946.1 791338 793263 D Identified by match to HMM PF01131.14; identified by match to HMM TIGR01051.; DNA topoisomerase I 791338..793263 Mycoplasma putrefaciens KS1 11057021 YP_004790529.1 CDS MPUT_0689 NC_015946.1 793408 794895 D Identified by match to HMM PF07690.10. Predicted to contain 12 transmembrane domains.; putative permease 793408..794895 Mycoplasma putrefaciens KS1 11057022 YP_004790530.1 CDS MPUT_0690 NC_015946.1 794979 796760 R Identified by match to HMM PF03606.9; predicted to contain 13 transmembrane domains.; C4-dicarboxylate anaerobic carrier superfamily protein complement(794979..796760) Mycoplasma putrefaciens KS1 11057023 YP_004790531.1 CDS MPUT_0691 NC_015946.1 796872 797555 R Identified by match to HMM PF01863.11.; putative metal-dependent hydrolase complement(796872..797555) Mycoplasma putrefaciens KS1 11057024 YP_004790532.1 CDS ychF NC_015946.1 797558 798652 R Identified by match to HMM PF06071.7; identified by match to HMM TIGR00092.; GTP-binding protein YchF complement(797558..798652) Mycoplasma putrefaciens KS1 11057025 YP_004790533.1 CDS MPUT_0693 NC_015946.1 798655 798849 R Identified by match to HMM PF06107.5.; hypothetical protein complement(798655..798849) Mycoplasma putrefaciens KS1 11057026 YP_004790534.1 CDS rsmG NC_015946.1 798851 799549 R Identified by match to HMM PF02527.9; identified by match to HMM TIGR00138.; 16S rRNA 7-methylguanosine methyltransferase complement(798851..799549) Mycoplasma putrefaciens KS1 11057027 YP_004790535.1 CDS pgsA NC_015946.1 799549 800136 R Identified by match to HMM PF01066.15; identified by match to HMM TIGR00560. Predicted to contain 5 transmembrane domains.; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(799549..800136) Mycoplasma putrefaciens KS1 11057028 YP_004790536.1 CDS MPUT_0696 NC_015946.1 800234 800923 R Predicted to contain 6 transmembrane domains.; hypothetical protein complement(800234..800923) Mycoplasma putrefaciens KS1 11057029 YP_004790537.1 CDS MPUT_0698 NC_015946.1 802578 805223 R Identified by match to HMM PF00122.14; identified by match to HMM TIGR01524. Predicted to contain 10 transmembrane domains.; Magnesium-translocating P-type ATPase complement(802578..805223) Mycoplasma putrefaciens KS1 11057031 YP_004790538.1 CDS hup-2 NC_015946.1 805316 806242 R Identified by match to HMM PF00216.15; identified by match to HMM TIGR00987. Predicted to contain 2 transmembrane domains.; DNA-binding HU domain-containing protein complement(805316..806242) Mycoplasma putrefaciens KS1 11057032 YP_004790539.1 CDS gidA NC_015946.1 806416 808302 R Identified by match to HMM PF01134.16; identified by match to HMM TIGR00136.; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA complement(806416..808302) Mycoplasma putrefaciens KS1 11057033 YP_004790540.1 CDS pncA NC_015946.1 808418 808900 D Identified by match to HMM PF00857.14.; pyrazinamidase/nicotinamidase 808418..808900 Mycoplasma putrefaciens KS1 11057034 YP_004790541.1 CDS MPUT_0702 NC_015946.1 808956 809819 R predicted to contain 3 transmembrane domains.; hypothetical protein complement(808956..809819) Mycoplasma putrefaciens KS1 11057035 YP_004790542.1 CDS MPUT_0703 NC_015946.1 809832 811127 R hypothetical protein complement(809832..811127) Mycoplasma putrefaciens KS1 11057036 YP_004790543.1 CDS MPUT_0705 NC_015946.1 812010 812846 R Predicted to contain 3 transmembrane domains.; hypothetical protein complement(812010..812846) Mycoplasma putrefaciens KS1 11057038 YP_004790544.1 CDS MPUT_0706 NC_015946.1 812859 814154 R hypothetical protein complement(812859..814154) Mycoplasma putrefaciens KS1 11057039 YP_004790545.1 CDS MPUT_0707 NC_015946.1 814582 814812 R hypothetical protein complement(814582..814812) Mycoplasma putrefaciens KS1 11057040 YP_004790546.1 CDS MPUT_0708 NC_015946.1 815349 816959 R Identified by match to HMM PF03382.8; identified by match to HMM TIGR02167. Predicted to contain 2 transmembrane domains and tandem Palindromic Amphipathic Repeat Coding Elements.; PARCEL domain-containing protein complement(815349..816959) Mycoplasma putrefaciens KS1 11057041 YP_004790547.1 CDS hlsO NC_015946.1 817412 818278 D Identified by match to HMM PF01430.13.; chaperonin HSP33 817412..818278 Mycoplasma putrefaciens KS1 11057042 YP_004790548.1 CDS MPUT_0710 NC_015946.1 818345 819244 D Identified by match to PF00005.21.; ABC transporter ATP-binding protein 818345..819244 Mycoplasma putrefaciens KS1 11057043 YP_004790549.1 CDS hflB NC_015946.1 819257 821323 R Identified by match to HMM PF01434.12; identified by match to HMM TIGR01241. Predicted to contain 3 transmembrane domains.; ATP-dependent metallopeptidase HflB complement(819257..821323) Mycoplasma putrefaciens KS1 11057044 YP_004790550.1 CDS tilS NC_015946.1 821579 822784 R Identified by match to HMM PF01171.14; identified by match to HMM TIGR02432.; tRNA(Ile)-lysidine synthetase complement(821579..822784) Mycoplasma putrefaciens KS1 11057045 YP_004790551.1 CDS MPUT_0713 NC_015946.1 822800 823597 R Identified by match to HMM PF01418.11.; RpiR family transcriptional regulator protein complement(822800..823597) Mycoplasma putrefaciens KS1 11057046 YP_004790552.1 CDS MPUT_0714 NC_015946.1 823660 824382 R Identified by match to HMM PF05175.8; identified by match to HMM TIGR03534.; methyltransferase complement(823660..824382) Mycoplasma putrefaciens KS1 11057047 YP_004790553.1 CDS holB NC_015946.1 824382 825125 R Identified by match to HMM TIGR00678.; DNA polymerase III delta' subunit complement(824382..825125) Mycoplasma putrefaciens KS1 11057048 YP_004790554.1 CDS tmk NC_015946.1 825103 825744 R Identified by match to HMM PF02223.11; identified by match to HMM TIGR00041.; thymidylate kinase complement(825103..825744) Mycoplasma putrefaciens KS1 11057049 YP_004790555.1 CDS recR NC_015946.1 825748 826338 R Identified by match to HMM PF02132.9; identified by match to HMM TIGR00615.; recombination protein RecR complement(825748..826338) Mycoplasma putrefaciens KS1 11057050 YP_004790556.1 CDS dnaX NC_015946.1 826340 828238 R Identified by match to HMM TIGR02397.; DNA polymerase III subunits gamma and tau complement(826340..828238) Mycoplasma putrefaciens KS1 11057051 YP_004790557.1 CDS MPUT_0719 NC_015946.1 828372 828815 R Identified by match to HMM PF00383.1; putative cytidine and deoxycytidylate deaminase, zinc-binding region family protein.; hypothetical protein complement(828372..828815) Mycoplasma putrefaciens KS1 11057052 YP_004790558.1 CDS MPUT_0721 NC_015946.1 829023 829655 R hypothetical protein complement(829023..829655) Mycoplasma putrefaciens KS1 11057054 YP_004790559.1 CDS MPUT_0722 NC_015946.1 829675 830475 R Identified by match to HMM PF08282.6; identified by match to HMM TIGR00099.; HAD-superfamily hydrolase complement(829675..830475) Mycoplasma putrefaciens KS1 11057055 YP_004790560.1 CDS MPUT_0723 NC_015946.1 830612 831808 R Identified by match to HMM PF02096.14; identified by match to HMM TIGR03592. Predicted to contain 6 transmembrane domains.; membrane protein insertase, YidC/OxaA family complement(830612..831808) Mycoplasma putrefaciens KS1 11057056 YP_004790561.1 CDS rnpA NC_015946.1 831820 832152 R Identified by match to HMM PF00825.12; identified by match to HMM TIGR00188.; ribonuclease P protein component complement(831820..832152) Mycoplasma putrefaciens KS1 11057057 YP_004790562.1 CDS rpmH NC_015946.1 832168 832302 R Identified by match to HMM PF00468.11; identified by match to HMM TIGR01030.; 50S ribosomal protein L34 complement(832168..832302) Mycoplasma putrefaciens KS1 11057058 MPUT_0125 tRNA MPUT_0125 NC_015946.1 142498 142573 D tRNA-Lys 142498..142573 Mycoplasma putrefaciens KS1 11056458 MPUT_0126 tRNA MPUT_0126 NC_015946.1 142580 142663 D tRNA-Leu 142580..142663 Mycoplasma putrefaciens KS1 11056459 MPUT_0175 tRNA MPUT_0175 NC_015946.1 178697 178773 D tRNA-Ile 178697..178773 Mycoplasma putrefaciens KS1 11056508 MPUT_0184 tRNA MPUT_0184 NC_015946.1 189800 189875 D tRNA-His 189800..189875 Mycoplasma putrefaciens KS1 11056517 MPUT_0189 tRNA MPUT_0189 NC_015946.1 192170 192245 D tRNA-Trp 192170..192245 Mycoplasma putrefaciens KS1 11056522 MPUT_0190 tRNA MPUT_0190 NC_015946.1 192284 192358 D tRNA-Trp 192284..192358 Mycoplasma putrefaciens KS1 11056523 MPUT_0246 tRNA MPUT_0246 NC_015946.1 266173 266257 D tRNA-Leu 266173..266257 Mycoplasma putrefaciens KS1 11056579 MPUT_0354 tRNA MPUT_0354 NC_015946.1 413812 413888 D tRNA-Arg 413812..413888 Mycoplasma putrefaciens KS1 11056687 MPUT_0447 tRNA MPUT_0447 NC_015946.1 508462 508537 R tRNA-Lys complement(508462..508537) Mycoplasma putrefaciens KS1 11056780 MPUT_0465 tRNA MPUT_0465 NC_015946.1 525713 525786 R tRNA-Gly complement(525713..525786) Mycoplasma putrefaciens KS1 11056798 MPUT_0481 tRNA MPUT_0481 NC_015946.1 542033 542121 R tRNA-Leu complement(542033..542121) Mycoplasma putrefaciens KS1 11056814 MPUT_0482 tRNA MPUT_0482 NC_015946.1 542135 542210 R tRNA-Lys complement(542135..542210) Mycoplasma putrefaciens KS1 11056815 MPUT_0483 tRNA MPUT_0483 NC_015946.1 542215 542289 R tRNA-Gln complement(542215..542289) Mycoplasma putrefaciens KS1 11056816 MPUT_0484 tRNA MPUT_0484 NC_015946.1 542295 542378 R tRNA-Tyr complement(542295..542378) Mycoplasma putrefaciens KS1 11056817 MPUT_0485 tRNA MPUT_0485 NC_015946.1 542386 542461 R tRNA-Thr complement(542386..542461) Mycoplasma putrefaciens KS1 11056818 MPUT_0587 tRNA MPUT_0587 NC_015946.1 677995 678085 R tRNA-Ser complement(677995..678085) Mycoplasma putrefaciens KS1 11056920 MPUT_0601 tRNA MPUT_0601 NC_015946.1 697970 698045 R tRNA-Phe complement(697970..698045) Mycoplasma putrefaciens KS1 11056934 MPUT_0602 tRNA MPUT_0602 NC_015946.1 698051 698127 R tRNA-Asp complement(698051..698127) Mycoplasma putrefaciens KS1 11056935 MPUT_0603 tRNA MPUT_0603 NC_015946.1 698130 698205 R tRNA-Met complement(698130..698205) Mycoplasma putrefaciens KS1 11056936 MPUT_0604 tRNA MPUT_0604 NC_015946.1 698229 698321 R tRNA-Ser complement(698229..698321) Mycoplasma putrefaciens KS1 11056937 MPUT_0605 tRNA MPUT_0605 NC_015946.1 698360 698436 R tRNA-Met complement(698360..698436) Mycoplasma putrefaciens KS1 11056938 MPUT_0606 tRNA MPUT_0606 NC_015946.1 698447 698523 R tRNA-Met complement(698447..698523) Mycoplasma putrefaciens KS1 11056939 MPUT_0607 tRNA MPUT_0607 NC_015946.1 698529 698604 R tRNA-Ala complement(698529..698604) Mycoplasma putrefaciens KS1 11056940 MPUT_0608 tRNA MPUT_0608 NC_015946.1 698613 698689 R tRNA-Pro complement(698613..698689) Mycoplasma putrefaciens KS1 11056941 MPUT_0609 tRNA MPUT_0609 NC_015946.1 698737 698813 R tRNA-Arg complement(698737..698813) Mycoplasma putrefaciens KS1 11056942 MPUT_0610 tRNA MPUT_0610 NC_015946.1 699013 699087 R tRNA-Cys complement(699013..699087) Mycoplasma putrefaciens KS1 11056943 MPUT_0615 tRNA MPUT_0615 NC_015946.1 706264 706339 R tRNA-Thr complement(706264..706339) Mycoplasma putrefaciens KS1 11056948 MPUT_0616 tRNA MPUT_0616 NC_015946.1 706351 706426 R tRNA-Val complement(706351..706426) Mycoplasma putrefaciens KS1 11056949 MPUT_0617 tRNA MPUT_0617 NC_015946.1 706433 706508 R tRNA-Glu complement(706433..706508) Mycoplasma putrefaciens KS1 11056950 MPUT_0618 tRNA MPUT_0618 NC_015946.1 706515 706590 R tRNA-Asn complement(706515..706590) Mycoplasma putrefaciens KS1 11056951 MPUT_0127 rRNA MPUT_0127 NC_015946.1 142984 144507 D 16S ribosomal RNA 142984..144507 Mycoplasma putrefaciens KS1 11056460 MPUT_0128 rRNA rrl-1 NC_015946.1 144730 147633 D 23S ribosomal RNA 144730..147633 Mycoplasma putrefaciens KS1 11056461 MPUT_0129 rRNA rrf-1 NC_015946.1 147700 147807 D 5S ribosomal RNA 147700..147807 Mycoplasma putrefaciens KS1 11056462 MPUT_0276 rRNA rrs-2 NC_015946.1 304089 305612 D 16S ribosomal RNA 304089..305612 Mycoplasma putrefaciens KS1 11056609 MPUT_0277 rRNA rrl-2 NC_015946.1 305838 308738 D 23S ribosomal RNA 305838..308738 Mycoplasma putrefaciens KS1 11056610 MPUT_0278 rRNA rrf-2 NC_015946.1 308803 308912 D 5S ribosomal RNA 308803..308912 Mycoplasma putrefaciens KS1 11056611