-- dump date 20120504_153506 -- class Genbank::Gene -- table gene_note -- id note 11056360 degenerate gene for conserved polytopic membrane protein with 12 transmembrane domains; the gene contains multiple authentic inframe stop codons and frameshift mutations that are not the result of sequencing errors 11056394 truncated gene encoding only the N-terminal region of a C-5 DNA methyltransferase gene 11056395 degenerate gene encoding N-terminal region of ORF with similarity to terminal ORF (MCAP_0571) of Integrative Conjugal Element of Mycoplasma capricolum (ICEC); gene is truncated and contains an authentic frameshift mutation that is not the result of a sequencing error. 11056422 gene for polytopic membrane protein contains an authentic point mutation; this gene contains a premature stop which is not the result of a sequencing error 11056467 gene contains an authentic point mutation; this gene contains a premature stop which is not the result of sequencing error; match to protein family HMM PF00155 11056469 gene contains an authentic point mutation; this gene contains a premature stop which is not the result of a sequencing error; match to protein family HMM PF00005.18 11056514 gene contains two authentic frameshift mutations that are not the result of sequencing errors. 11056549 gene contains an authentic frameshift mutation that is not the result of a sequencing error; identified by match to HMM PF00069.19; identified by match to HMM TIGR03903. Predicted to contain 1 transmembrane domain. 11056561 degenerate transposase gene contains an authentic point mutation and authentic frameshift mutation that are not the result of sequencing errors. 11056564 degenerate gene is truncated in region encoding the N-terminus of Sau96I-like restriction enzyme; gene also contains an authentic point mutation that represents a premature stop and which is not the result of a sequencing error. 11056565 degenerate gene for Type II restriction system DNA methylase similar to Sau96I; gene is truncated in region encoding C-terminus and contains an authentic frameshift and point mutations that are not the result of sequencing errors. 11056566 degenerate gene with two authentic frameshift mutations that are not the result of sequencing errors; translation product has matches to HMM PF00145.11 and HMM TIGR00675. 11056567 degenerate restriction endonuclease gene similar to MnlI; gene contains authentic frameshift and point mutations that are not the result of sequencing errors. 11056568 gene contains authentic frameshift and point mutations that are not the result of sequencing errors. 11056571 region exhibits modest similarity to M. mycoides subsp. capri transposase ISMmy2; gene contains authentic frameshift and point mutations that are not the result of sequencing errors. 11056573 gene contains authentic frameshift mutation near the N-terminus of coding sequence that is not the result of a sequencing error; identified by match to HMM PF03572.1; identified by match to HMM TIGR00225. Predicted to contain 1 transmembrane domain. 11056608 gene contains an authentic frameshift mutation that is not the result of a sequencing error. 11056703 gene contains an authentic frameshift mutation that is not the result of a sequencing error; identified by match to HMM PF02646. 11056719 degenerate gene contains multiple authentic frameshift and point mutations that are not the result of sequencing errors. 11056743 gene contains two authentic frameshift mutations that are not the result of sequencing errors. 11056834 degenerate gene contains multiple authentic frameshift and point mutations that are not the result of sequencing errors. 11056835 degenerate gene with authentic frameshift and point mutations that are not the result of sequencing errors. 11056836 degenerate gene containing multiple authentic frameshift mutations that are not the result of sequencing errors. 11056839 gene contains an authentic frameshift mutation that is not the result of a sequencing error. 11056840 gene contains an authentic frameshift mutation that is not the result of a sequencing error. 11056841 gene contains an authentic frameshift mutation that is not the result of a sequencing error. 11056843 degenerate gene with multiple authentic frameshift and point mutations that are not the result of sequencing errors; probable truncation of N-terminal coding region. 11056849 gene contains an authentic frameshift mutation that is not the result of a sequencing error; similar to M. capricolum MCAP_0571, the terminal ORF of Integrative Conjugal Element ICEC. 11056853 gene contains an authentic point mutation that is not a result of a sequencing error; identified by match to HMM TIGR02224. 11056856 gene contains an authentic point mutation that is not a result of a sequencing error; identified by match to HMM PF02384.10; identified by match to HMM TIGR00497. 11056863 degenerate gene with similarity to MCAP_0494; coding sequence is truncated at N-terminus and contains multiple point mutations that are not the result of sequencing errors. 11056984 degenerate gene for AAA+ superfamily ATPase; identified by match to COG1373. Gene contains multiple authentic frameshift mutations that are not the result of sequencing errors. 11056987 truncated gene for lipoprotein with similarity to Mycoplasma capricolum MCAP_0758; gene encodes only the C-terminal region. 11057017 gene contains an authentic frameshift mutation that is not the result of a sequencing error; identified by match to HMM TIGR00337; identified by match to HMM PF06418. 11057030 gene contains authentic point mutation that is not the result of a sequencing error; identified by match to HMM PF00324.15; full-length protein is predicted to contain 12 transmembrane domains. 11057037 degenerate transposase gene similar to ISMmy2 of Mycoplasma mycoides subsp. capri; gene encodes regions matching the N- and C-terminus only; gene contains authentic point mutations that are not the result of sequencing errors.