-- dump date 20120504_153612 -- class Genbank::CDS -- table cds_note -- id note YP_004663017.1 COG1479 Uncharacterized conserved protein YP_004663020.1 COG2801 Transposase and inactivated derivatives YP_004663021.1 COG1484 DNA replication protein YP_004663023.1 COG1309 Transcriptional regulator YP_004663028.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004663029.1 COG2378 Predicted transcriptional regulator YP_004663031.1 COG0681 Signal peptidase I YP_004663032.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_004663033.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004663034.1 COG0226 ABC-type phosphate transport system, periplasmic component YP_004663036.1 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase YP_004663037.1 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase YP_004663039.1 COG2217 Cation transport ATPase YP_004663040.1 COG0438 Glycosyltransferase YP_004663042.1 COG2453 Predicted protein-tyrosine phosphatase YP_004663043.1 COG1733 Predicted transcriptional regulators YP_004663045.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004663049.1 COG3391 Uncharacterized conserved protein YP_004663052.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_004663053.1 COG2203 FOG: GAF domain YP_004663054.1 COG0642 Signal transduction histidine kinase YP_004663055.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004663056.1 COG2391 Predicted transporter component YP_004663057.1 COG2391 Predicted transporter component YP_004663058.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_004663060.1 COG1413 FOG: HEAT repeat YP_004663062.1 COG2819 Predicted hydrolase of the alpha/beta superfamily YP_004663064.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_004663065.1 COG3000 Sterol desaturase YP_004663066.1 COG1309 Transcriptional regulator YP_004663067.1 COG3791 Uncharacterized conserved protein YP_004663069.1 COG5649 Uncharacterized conserved protein YP_004663070.1 COG1899 Deoxyhypusine synthase YP_004663071.1 COG1309 Transcriptional regulator YP_004663072.1 COG0277 FAD/FMN-containing dehydrogenases YP_004663073.1 COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes YP_004663074.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_004663077.1 COG3808 Inorganic pyrophosphatase YP_004663079.1 COG0477 Permeases of the major facilitator superfamily YP_004663080.1 COG0583 Transcriptional regulator YP_004663082.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004663083.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_004663084.1 COG0346 Lactoylglutathione lyase and related lyases YP_004663085.1 COG0726 Predicted xylanase/chitin deacetylase YP_004663086.1 COG2337 Growth inhibitor YP_004663089.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_004663090.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004663091.1 COG1309 Transcriptional regulator YP_004663092.1 COG1398 Fatty-acid desaturase YP_004663093.1 COG2746 Aminoglycoside N3'-acetyltransferase YP_004663095.1 COG5640 Secreted trypsin-like serine protease YP_004663096.1 COG2272 Carboxylesterase type B YP_004663099.1 COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 YP_004663100.1 COG0501 Zn-dependent protease with chaperone function YP_004663101.1 COG3791 Uncharacterized conserved protein YP_004663102.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004663104.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004663105.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004663106.1 COG1959 Predicted transcriptional regulator YP_004663110.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_004663111.1 COG0438 Glycosyltransferase YP_004663112.1 COG4641 Uncharacterized protein conserved in bacteria YP_004663113.1 COG0438 Glycosyltransferase YP_004663114.1 COG0438 Glycosyltransferase YP_004663115.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_004663116.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_004663117.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_004663118.1 COG0673 Predicted dehydrogenases and related proteins YP_004663119.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_004663120.1 COG2453 Predicted protein-tyrosine phosphatase YP_004663121.1 COG3664 Beta-xylosidase YP_004663122.1 COG0500 SAM-dependent methyltransferases YP_004663124.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_004663127.1 COG3325 Chitinase YP_004663132.1 COG0612 Predicted Zn-dependent peptidases YP_004663133.1 COG0612 Predicted Zn-dependent peptidases YP_004663136.1 COG0417 DNA polymerase elongation subunit (family B) YP_004663137.1 COG2378 Predicted transcriptional regulator YP_004663139.1 COG1278 Cold shock proteins YP_004663141.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_004663142.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_004663145.1 COG2010 Cytochrome c, mono- and diheme variants YP_004663146.1 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit YP_004663149.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004663150.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004663152.1 COG1073 Hydrolases of the alpha/beta superfamily YP_004663154.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_004663155.1 COG0500 SAM-dependent methyltransferases YP_004663156.1 COG3239 Fatty acid desaturase YP_004663157.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_004663158.1 COG2813 16S RNA G1207 methylase RsmC YP_004663159.1 COG0842 ABC-type multidrug transport system, permease component YP_004663160.1 COG1131 ABC-type multidrug transport system, ATPase component YP_004663161.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_004663162.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_004663163.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_004663164.1 COG2852 Uncharacterized protein conserved in bacteria YP_004663166.1 COG0433 Predicted ATPase YP_004663167.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_004663168.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_004663169.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_004663175.1 COG2966 Uncharacterized conserved protein YP_004663178.1 COG3568 Metal-dependent hydrolase YP_004663179.1 COG1238 Predicted membrane protein YP_004663180.1 COG0426 Uncharacterized flavoproteins YP_004663181.1 COG0515 Serine/threonine protein kinase YP_004663182.1 COG0477 Permeases of the major facilitator superfamily YP_004663183.1 COG0583 Transcriptional regulator YP_004663184.1 COG3070 Regulator of competence-specific genes YP_004663185.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_004663186.1 COG1045 Serine acetyltransferase YP_004663187.1 COG0031 Cysteine synthase YP_004663188.1 COG0520 Selenocysteine lyase YP_004663189.1 COG2010 Cytochrome c, mono- and diheme variants YP_004663190.1 COG1540 Uncharacterized proteins, homologs of lactam utilization protein B YP_004663191.1 COG1984 Allophanate hydrolase subunit 2 YP_004663195.1 COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains YP_004663196.1 COG0450 Peroxiredoxin YP_004663197.1 COG2128 Uncharacterized conserved protein YP_004663198.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_004663199.1 COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit YP_004663200.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_004663201.1 COG0500 SAM-dependent methyltransferases YP_004663202.1 COG0531 Amino acid transporters YP_004663203.1 COG0477 Permeases of the major facilitator superfamily YP_004663204.1 COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase YP_004663206.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_004663207.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_004663208.1 COG0642 Signal transduction histidine kinase YP_004663209.1 COG0784 FOG: CheY-like receiver YP_004663212.1 COG3225 ABC-type uncharacterized transport system involved in gliding motility, auxiliary component YP_004663213.1 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component YP_004663214.1 COG1131 ABC-type multidrug transport system, ATPase component YP_004663215.1 COG4276 Uncharacterized conserved protein YP_004663216.1 COG0009 Putative translation factor (SUA5) YP_004663220.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_004663221.1 COG1484 DNA replication protein YP_004663222.1 COG4584 Transposase and inactivated derivatives YP_004663224.1 COG1413 FOG: HEAT repeat YP_004663226.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_004663229.1 COG0276 Protoheme ferro-lyase (ferrochelatase) YP_004663230.1 COG2967 Uncharacterized protein affecting Mg2+/Co2+ transport YP_004663231.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_004663232.1 COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases YP_004663233.1 COG3280 Maltooligosyl trehalose synthase YP_004663234.1 COG5531 SWIB-domain-containing proteins implicated in chromatin remodeling YP_004663235.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_004663236.1 COG0560 Phosphoserine phosphatase YP_004663237.1 COG3875 Uncharacterized conserved protein YP_004663238.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_004663239.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_004663241.1 COG2199 FOG: GGDEF domain YP_004663242.1 COG0448 ADP-glucose pyrophosphorylase YP_004663243.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_004663245.1 COG1690 Uncharacterized conserved protein YP_004663246.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004663247.1 COG1816 Adenosine deaminase YP_004663248.1 COG1520 FOG: WD40-like repeat YP_004663249.1 COG0210 Superfamily I DNA and RNA helicases YP_004663250.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_004663251.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004663255.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004663256.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_004663259.1 COG0536 Predicted GTPase YP_004663260.1 COG5502 Uncharacterized conserved protein YP_004663261.1 COG2303 Choline dehydrogenase and related flavoproteins YP_004663262.1 COG1515 Deoxyinosine 3'endonuclease (endonuclease V) YP_004663263.1 COG1404 Subtilisin-like serine proteases YP_004663264.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004663266.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_004663267.1 COG0778 Nitroreductase YP_004663268.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_004663269.1 COG3415 Transposase and inactivated derivatives YP_004663270.1 COG3328 Transposase and inactivated derivatives YP_004663271.1 COG1403 Restriction endonuclease YP_004663272.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_004663274.1 COG0726 Predicted xylanase/chitin deacetylase YP_004663275.1 COG2030 Acyl dehydratase YP_004663276.1 COG0515 Serine/threonine protein kinase YP_004663277.1 COG0595 Predicted hydrolase of the metallo-beta-lactamase superfamily YP_004663278.1 COG1666 Uncharacterized protein conserved in bacteria YP_004663280.1 COG0621 2-methylthioadenine synthetase YP_004663283.1 COG2834 Outer membrane lipoprotein-sorting protein YP_004663284.1 COG0566 rRNA methylases YP_004663285.1 COG0536 Predicted GTPase YP_004663286.1 COG0211 Ribosomal protein L27 YP_004663287.1 COG0261 Ribosomal protein L21 YP_004663289.1 COG0515 Serine/threonine protein kinase YP_004663290.1 COG3491 Isopenicillin N synthase and related dioxygenases YP_004663291.1 COG0388 Predicted amidohydrolase YP_004663292.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) YP_004663293.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_004663294.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit YP_004663295.1 COG3809 Uncharacterized protein conserved in bacteria YP_004663296.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins YP_004663297.1 COG2329 Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides YP_004663298.1 COG0116 Predicted N6-adenine-specific DNA methylase YP_004663299.1 COG0344 Predicted membrane protein YP_004663304.1 COG1032 Fe-S oxidoreductase YP_004663306.1 COG4771 Outer membrane receptor for ferrienterochelin and colicins YP_004663307.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_004663308.1 COG0811 Biopolymer transport proteins YP_004663309.1 COG0848 Biopolymer transport protein YP_004663310.1 COG0848 Biopolymer transport protein YP_004663313.1 COG0606 Predicted ATPase with chaperone activity YP_004663314.1 COG1252 NADH dehydrogenase, FAD-containing subunit YP_004663315.1 COG0468 RecA/RadA recombinase YP_004663318.1 COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA YP_004663319.1 COG1183 Phosphatidylserine synthase YP_004663320.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004663322.1 COG0776 Bacterial nucleoid DNA-binding protein YP_004663323.1 COG0739 Membrane proteins related to metalloendopeptidases YP_004663324.1 COG2008 Threonine aldolase YP_004663325.1 COG0177 Predicted EndoIII-related endonuclease YP_004663326.1 COG0242 N-formylmethionyl-tRNA deformylase YP_004663327.1 COG0784 FOG: CheY-like receiver YP_004663328.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase YP_004663329.1 COG0625 Glutathione S-transferase YP_004663331.1 COG1210 UDP-glucose pyrophosphorylase YP_004663334.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_004663335.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_004663336.1 COG1164 Oligoendopeptidase F YP_004663340.1 COG3000 Sterol desaturase YP_004663341.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004663343.1 COG0840 Methyl-accepting chemotaxis protein YP_004663345.1 COG0631 Serine/threonine protein phosphatase YP_004663349.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004663350.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004663351.1 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase YP_004663353.1 COG0583 Transcriptional regulator YP_004663354.1 COG0144 tRNA and rRNA cytosine-C5-methylases YP_004663355.1 COG0757 3-dehydroquinate dehydratase II YP_004663356.1 COG0223 Methionyl-tRNA formyltransferase YP_004663358.1 COG1413 FOG: HEAT repeat YP_004663359.1 COG1289 Predicted membrane protein YP_004663363.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_004663364.1 COG0326 Molecular chaperone, HSP90 family YP_004663365.1 COG2135 Uncharacterized conserved protein YP_004663367.1 COG2183 Transcriptional accessory protein YP_004663368.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_004663369.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_004663371.1 COG3540 Phosphodiesterase/alkaline phosphatase D YP_004663373.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004663377.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains YP_004663378.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_004663380.1 COG0405 Gamma-glutamyltransferase YP_004663381.1 COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold YP_004663382.1 COG0339 Zn-dependent oligopeptidases YP_004663385.1 COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold YP_004663386.1 COG0784 FOG: CheY-like receiver YP_004663387.1 COG1131 ABC-type multidrug transport system, ATPase component YP_004663390.1 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein YP_004663392.1 COG0216 Protein chain release factor A YP_004663398.1 COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1 YP_004663399.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_004663400.1 COG1048 Aconitase A YP_004663401.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_004663402.1 COG1716 FOG: FHA domain YP_004663403.1 COG1716 FOG: FHA domain YP_004663404.1 COG2378 Predicted transcriptional regulator YP_004663405.1 COG2378 Predicted transcriptional regulator YP_004663407.1 COG0263 Glutamate 5-kinase YP_004663408.1 COG2262 GTPases YP_004663409.1 COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain YP_004663410.1 COG3385 FOG: Transposase and inactivated derivatives YP_004663411.1 COG0240 Glycerol-3-phosphate dehydrogenase YP_004663414.1 COG3391 Uncharacterized conserved protein YP_004663415.1 COG0642 Signal transduction histidine kinase YP_004663416.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004663417.1 COG0500 SAM-dependent methyltransferases YP_004663420.1 COG2319 FOG: WD40 repeat YP_004663422.1 COG1716 FOG: FHA domain YP_004663427.1 COG2303 Choline dehydrogenase and related flavoproteins YP_004663435.1 COG3391 Uncharacterized conserved protein YP_004663437.1 COG1716 FOG: FHA domain YP_004663439.1 COG0583 Transcriptional regulator YP_004663440.1 COG0457 FOG: TPR repeat YP_004663443.1 COG0457 FOG: TPR repeat YP_004663444.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_004663447.1 COG4559 ABC-type hemin transport system, ATPase component YP_004663448.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_004663449.1 COG4558 ABC-type hemin transport system, periplasmic component YP_004663450.1 COG3720 Putative heme degradation protein YP_004663452.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_004663456.1 COG2360 Leu/Phe-tRNA-protein transferase YP_004663460.1 COG4536 Putative Mg2+ and Co2+ transporter CorB YP_004663464.1 COG0515 Serine/threonine protein kinase YP_004663465.1 COG0297 Glycogen synthase YP_004663466.1 COG0259 Pyridoxamine-phosphate oxidase YP_004663467.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004663468.1 COG1232 Protoporphyrinogen oxidase YP_004663470.1 COG3275 Putative regulator of cell autolysis YP_004663471.1 COG3279 Response regulator of the LytR/AlgR family YP_004663472.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_004663473.1 COG1882 Pyruvate-formate lyase YP_004663475.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_004663477.1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) YP_004663478.1 COG1409 Predicted phosphohydrolases YP_004663479.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_004663483.1 COG3393 Predicted acetyltransferase YP_004663484.1 COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA YP_004663485.1 COG0471 Di- and tricarboxylate transporters YP_004663486.1 COG1274 Phosphoenolpyruvate carboxykinase (GTP) YP_004663488.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_004663489.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_004663491.1 COG0132 Dethiobiotin synthetase YP_004663492.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_004663493.1 COG0502 Biotin synthase and related enzymes YP_004663495.1 COG1066 Predicted ATP-dependent serine protease YP_004663496.1 COG0515 Serine/threonine protein kinase YP_004663497.1 COG3328 Transposase and inactivated derivatives YP_004663498.1 COG3328 Transposase and inactivated derivatives YP_004663499.1 COG3325 Chitinase YP_004663500.1 COG0262 Dihydrofolate reductase YP_004663501.1 COG0642 Signal transduction histidine kinase YP_004663502.1 COG5424 Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C YP_004663503.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_004663504.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004663506.1 COG1015 Phosphopentomutase YP_004663508.1 COG0457 FOG: TPR repeat YP_004663509.1 COG0799 Uncharacterized homolog of plant Iojap protein YP_004663510.1 COG1576 Uncharacterized conserved protein YP_004663511.1 COG1690 Uncharacterized conserved protein YP_004663512.1 COG0696 Phosphoglyceromutase YP_004663513.1 COG1040 Predicted amidophosphoribosyltransferases YP_004663515.1 COG1484 DNA replication protein YP_004663516.1 COG4584 Transposase and inactivated derivatives YP_004663521.1 COG2357 Uncharacterized protein conserved in bacteria YP_004663523.1 COG0515 Serine/threonine protein kinase YP_004663525.1 COG1396 Predicted transcriptional regulators YP_004663526.1 COG0515 Serine/threonine protein kinase YP_004663527.1 COG0308 Aminopeptidase N YP_004663528.1 COG2162 Arylamine N-acetyltransferase YP_004663529.1 COG0457 FOG: TPR repeat YP_004663530.1 COG0380 Trehalose-6-phosphate synthase YP_004663532.1 COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation YP_004663533.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004663534.1 COG0112 Glycine/serine hydroxymethyltransferase YP_004663536.1 COG0759 Uncharacterized conserved protein YP_004663537.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_004663539.1 COG3119 Arylsulfatase A and related enzymes YP_004663541.1 COG4262 Predicted spermidine synthase with an N-terminal membrane domain YP_004663545.1 COG1586 S-adenosylmethionine decarboxylase YP_004663546.1 COG0552 Signal recognition particle GTPase YP_004663547.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_004663549.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_004663550.1 COG0400 Predicted esterase YP_004663551.1 COG0432 Uncharacterized conserved protein YP_004663552.1 COG1376 Uncharacterized protein conserved in bacteria YP_004663553.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004663554.1 COG4276 Uncharacterized conserved protein YP_004663556.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004663557.1 COG0642 Signal transduction histidine kinase YP_004663560.1 COG2203 FOG: GAF domain YP_004663561.1 COG0515 Serine/threonine protein kinase YP_004663564.1 COG1446 Asparaginase YP_004663565.1 COG0693 Putative intracellular protease/amidase YP_004663566.1 COG2151 Predicted metal-sulfur cluster biosynthetic enzyme YP_004663567.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_004663568.1 COG0520 Selenocysteine lyase YP_004663569.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_004663570.1 COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component YP_004663571.1 COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component YP_004663572.1 COG1959 Predicted transcriptional regulator YP_004663573.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_004663579.1 COG2214 DnaJ-class molecular chaperone YP_004663580.1 COG0457 FOG: TPR repeat YP_004663581.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_004663583.1 COG0612 Predicted Zn-dependent peptidases YP_004663586.1 COG2264 Ribosomal protein L11 methylase YP_004663587.1 COG1988 Predicted membrane-bound metal-dependent hydrolases YP_004663588.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_004663589.1 COG4539 Predicted membrane protein YP_004663591.1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) YP_004663592.1 COG1385 Uncharacterized protein conserved in bacteria YP_004663596.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_004663597.1 COG0642 Signal transduction histidine kinase YP_004663598.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004663599.1 COG0583 Transcriptional regulator YP_004663600.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004663601.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004663603.1 COG0500 SAM-dependent methyltransferases YP_004663604.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_004663605.1 COG2890 Methylase of polypeptide chain release factors YP_004663608.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_004663611.1 COG1994 Zn-dependent proteases YP_004663612.1 COG5031 Uncharacterized protein involved in ubiquinone biosynthesis YP_004663613.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_004663615.1 COG0439 Biotin carboxylase YP_004663616.1 COG0511 Biotin carboxyl carrier protein YP_004663617.1 COG0098 Ribosomal protein S5 YP_004663618.1 COG0730 Predicted permeases YP_004663621.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_004663622.1 COG1534 Predicted RNA-binding protein containing KH domain, possibly ribosomal protein YP_004663623.1 COG1403 Restriction endonuclease YP_004663624.1 COG3950 Predicted ATP-binding protein involved in virulence YP_004663626.1 COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase YP_004663627.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_004663628.1 COG0381 UDP-N-acetylglucosamine 2-epimerase YP_004663629.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase YP_004663631.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_004663632.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_004663634.1 COG0504 CTP synthase (UTP-ammonia lyase) YP_004663635.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase YP_004663636.1 COG1778 Low specificity phosphatase (HAD superfamily) YP_004663637.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004663638.1 COG0071 Molecular chaperone (small heat shock protein) YP_004663640.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_004663641.1 COG3830 ACT domain-containing protein YP_004663642.1 COG0515 Serine/threonine protein kinase YP_004663643.1 COG0784 FOG: CheY-like receiver YP_004663644.1 COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit YP_004663645.1 COG1894 NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit YP_004663646.1 COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J) YP_004663647.1 COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) YP_004663648.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_004663649.1 COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M) YP_004663650.1 COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N) YP_004663651.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_004663652.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004663653.1 COG2205 Osmosensitive K+ channel histidine kinase YP_004663654.1 COG3276 Selenocysteine-specific translation elongation factor YP_004663655.1 COG2236 Predicted phosphoribosyltransferases YP_004663656.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_004663657.1 COG1281 Disulfide bond chaperones of the HSP33 family YP_004663658.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit YP_004663659.1 COG0629 Single-stranded DNA-binding protein YP_004663660.1 COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) YP_004663661.1 COG1490 D-Tyr-tRNAtyr deacylase YP_004663663.1 COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) YP_004663664.1 COG1544 Ribosome-associated protein Y (PSrp-1) YP_004663665.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004663667.1 COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog YP_004663668.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_004663669.1 COG1934 Uncharacterized protein conserved in bacteria YP_004663671.1 COG1560 Lauroyl/myristoyl acyltransferase YP_004663672.1 COG3724 Succinylarginine dihydrolase YP_004663675.1 COG2606 Uncharacterized conserved protein YP_004663676.1 COG0457 FOG: TPR repeat YP_004663679.1 COG1835 Predicted acyltransferases YP_004663680.1 COG1004 Predicted UDP-glucose 6-dehydrogenase YP_004663683.1 COG3795 Uncharacterized protein conserved in bacteria YP_004663685.1 COG1484 DNA replication protein YP_004663686.1 COG4584 Transposase and inactivated derivatives YP_004663688.1 COG0515 Serine/threonine protein kinase YP_004663689.1 COG0515 Serine/threonine protein kinase YP_004663697.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_004663698.1 COG0438 Glycosyltransferase YP_004663699.1 COG1835 Predicted acyltransferases YP_004663700.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily YP_004663701.1 COG1940 Transcriptional regulator/sugar kinase YP_004663703.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_004663704.1 COG1216 Predicted glycosyltransferases YP_004663705.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_004663706.1 COG0500 SAM-dependent methyltransferases YP_004663707.1 COG0438 Glycosyltransferase YP_004663708.1 COG0438 Glycosyltransferase YP_004663709.1 COG0438 Glycosyltransferase YP_004663710.1 COG0438 Glycosyltransferase YP_004663711.1 COG0438 Glycosyltransferase YP_004663713.1 COG0438 Glycosyltransferase YP_004663714.1 COG0438 Glycosyltransferase YP_004663715.1 COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis YP_004663716.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_004663719.1 COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1 YP_004663722.1 COG4970 Tfp pilus assembly protein FimT YP_004663723.1 COG2010 Cytochrome c, mono- and diheme variants YP_004663725.1 COG0642 Signal transduction histidine kinase YP_004663726.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_004663727.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_004663729.1 COG0035 Uracil phosphoribosyltransferase YP_004663731.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_004663739.1 COG4102 Uncharacterized protein conserved in bacteria YP_004663742.1 COG2322 Predicted membrane protein YP_004663743.1 COG0642 Signal transduction histidine kinase YP_004663744.1 COG0784 FOG: CheY-like receiver YP_004663745.1 COG4251 Bacteriophytochrome (light-regulated signal transduction histidine kinase) YP_004663746.1 COG3230 Heme oxygenase YP_004663747.1 COG1404 Subtilisin-like serine proteases YP_004663748.1 COG1201 Lhr-like helicases YP_004663749.1 COG0644 Dehydrogenases (flavoproteins) YP_004663750.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_004663752.1 COG0784 FOG: CheY-like receiver YP_004663753.1 COG0031 Cysteine synthase YP_004663756.1 COG0845 Membrane-fusion protein YP_004663757.1 COG0841 Cation/multidrug efflux pump YP_004663758.1 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit YP_004663759.1 COG1145 Ferredoxin YP_004663760.1 COG2217 Cation transport ATPase YP_004663761.1 COG1309 Transcriptional regulator YP_004663762.1 COG3631 Ketosteroid isomerase-related protein YP_004663763.1 COG0038 Chloride channel protein EriC YP_004663764.1 COG1858 Cytochrome c peroxidase YP_004663767.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004663769.1 COG0527 Aspartokinases YP_004663770.1 COG0527 Aspartokinases YP_004663771.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_004663772.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_004663773.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_004663774.1 COG2866 Predicted carboxypeptidase YP_004663777.1 COG0515 Serine/threonine protein kinase YP_004663778.1 COG0419 ATPase involved in DNA repair YP_004663779.1 COG0420 DNA repair exonuclease YP_004663782.1 COG2133 Glucose/sorbosone dehydrogenases YP_004663783.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_004663784.1 COG0500 SAM-dependent methyltransferases YP_004663785.1 COG0364 Glucose-6-phosphate 1-dehydrogenase YP_004663786.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_004663787.1 COG0362 6-phosphogluconate dehydrogenase YP_004663788.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_004663793.1 COG1960 Acyl-CoA dehydrogenases YP_004663795.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004663799.1 COG0457 FOG: TPR repeat YP_004663801.1 COG1846 Transcriptional regulators YP_004663805.1 COG0642 Signal transduction histidine kinase YP_004663806.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004663807.1 COG3823 Glutamine cyclotransferase YP_004663808.1 COG0784 FOG: CheY-like receiver YP_004663809.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004663810.1 COG0515 Serine/threonine protein kinase YP_004663811.1 COG1297 Predicted membrane protein YP_004663812.1 COG2202 FOG: PAS/PAC domain YP_004663813.1 COG0515 Serine/threonine protein kinase YP_004663815.1 COG0642 Signal transduction histidine kinase YP_004663816.1 COG5553 Predicted metal-dependent enzyme of the double-stranded beta helix superfamily YP_004663817.1 COG3971 2-keto-4-pentenoate hydratase YP_004663819.1 COG0300 Short-chain dehydrogenases of various substrate specificities YP_004663821.1 COG4329 Predicted membrane protein YP_004663822.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_004663823.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_004663824.1 COG0662 Mannose-6-phosphate isomerase YP_004663825.1 COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold YP_004663826.1 COG3844 Kynureninase YP_004663827.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_004663828.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004663830.1 COG3177 Uncharacterized conserved protein YP_004663831.1 COG0657 Esterase/lipase YP_004663832.1 COG0174 Glutamine synthetase YP_004663833.1 COG0531 Amino acid transporters YP_004663836.1 COG1716 FOG: FHA domain YP_004663837.1 COG0515 Serine/threonine protein kinase YP_004663839.1 COG0789 Predicted transcriptional regulators YP_004663840.1 COG0789 Predicted transcriptional regulators YP_004663841.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_004663843.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_004663846.1 COG1233 Phytoene dehydrogenase and related proteins YP_004663847.1 COG1562 Phytoene/squalene synthetase YP_004663848.1 COG1233 Phytoene dehydrogenase and related proteins YP_004663849.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_004663850.1 COG1225 Peroxiredoxin YP_004663851.1 COG1090 Predicted nucleoside-diphosphate sugar epimerase YP_004663852.1 COG2382 Enterochelin esterase and related enzymes YP_004663854.1 COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins YP_004663855.1 COG1408 Predicted phosphohydrolases YP_004663856.1 COG1309 Transcriptional regulator YP_004663858.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_004663860.1 COG0296 1,4-alpha-glucan branching enzyme YP_004663861.1 COG1716 FOG: FHA domain YP_004663862.1 COG0515 Serine/threonine protein kinase YP_004663866.1 COG0840 Methyl-accepting chemotaxis protein YP_004663867.1 COG1011 Predicted hydrolase (HAD superfamily) YP_004663870.1 COG0625 Glutathione S-transferase YP_004663871.1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) YP_004663873.1 COG0515 Serine/threonine protein kinase YP_004663875.1 COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold YP_004663881.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004663883.1 COG0515 Serine/threonine protein kinase YP_004663884.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_004663885.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant) YP_004663886.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004663887.1 COG0625 Glutathione S-transferase YP_004663888.1 COG0397 Uncharacterized conserved protein YP_004663889.1 COG0221 Inorganic pyrophosphatase YP_004663890.1 COG5607 Uncharacterized conserved protein YP_004663892.1 COG0173 Aspartyl-tRNA synthetase YP_004663894.1 COG0443 Molecular chaperone YP_004663896.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_004663897.1 COG1360 Flagellar motor protein YP_004663901.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_004663903.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_004663909.1 COG0515 Serine/threonine protein kinase YP_004663910.1 COG0515 Serine/threonine protein kinase YP_004663921.1 COG1309 Transcriptional regulator YP_004663923.1 COG0829 Urease accessory protein UreH YP_004663924.1 COG0831 Urea amidohydrolase (urease) gamma subunit YP_004663925.1 COG0804 Urea amidohydrolase (urease) alpha subunit YP_004663926.1 COG0830 Urease accessory protein UreF YP_004663927.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase YP_004663928.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_004663929.1 COG2312 Erythromycin esterase homolog YP_004663930.1 COG4319 Ketosteroid isomerase homolog YP_004663931.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004663934.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_004663935.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_004663936.1 COG0848 Biopolymer transport protein YP_004663937.1 COG0811 Biopolymer transport proteins YP_004663938.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004663939.1 COG0642 Signal transduction histidine kinase YP_004663941.1 COG3547 Transposase and inactivated derivatives YP_004663944.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004663946.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004663947.1 COG2373 Large extracellular alpha-helical protein YP_004663948.1 COG2373 Large extracellular alpha-helical protein YP_004663955.1 COG0679 Predicted permeases YP_004663957.1 COG0457 FOG: TPR repeat YP_004663962.1 COG0784 FOG: CheY-like receiver YP_004663963.1 COG0784 FOG: CheY-like receiver YP_004663964.1 COG2202 FOG: PAS/PAC domain YP_004663966.1 COG1960 Acyl-CoA dehydrogenases YP_004663970.1 COG0612 Predicted Zn-dependent peptidases YP_004663971.1 COG0612 Predicted Zn-dependent peptidases YP_004663974.1 COG4715 Uncharacterized conserved protein YP_004663975.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_004663976.1 COG0583 Transcriptional regulator YP_004663979.1 COG0438 Glycosyltransferase YP_004663980.1 COG1030 Membrane-bound serine protease (ClpP class) YP_004663981.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_004663983.1 COG0789 Predicted transcriptional regulators YP_004663984.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_004663986.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004663987.1 COG3339 Uncharacterized conserved protein YP_004663988.1 COG3842 ABC-type spermidine/putrescine transport systems, ATPase components YP_004663989.1 COG1178 ABC-type Fe3+ transport system, permease component YP_004663990.1 COG1840 ABC-type Fe3+ transport system, periplasmic component YP_004663992.1 COG0524 Sugar kinases, ribokinase family YP_004663994.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_004663995.1 COG0457 FOG: TPR repeat YP_004663996.1 COG0006 Xaa-Pro aminopeptidase YP_004663997.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004663998.1 COG1946 Acyl-CoA thioesterase YP_004663999.1 COG0692 Uracil DNA glycosylase YP_004664000.1 COG4962 Flp pilus assembly protein, ATPase CpaF YP_004664003.1 COG0515 Serine/threonine protein kinase YP_004664004.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_004664005.1 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases YP_004664006.1 COG2319 FOG: WD40 repeat YP_004664007.1 COG1729 Uncharacterized protein conserved in bacteria YP_004664008.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_004664010.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_004664020.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_004664021.1 COG2202 FOG: PAS/PAC domain YP_004664023.1 COG3287 Uncharacterized conserved protein YP_004664024.1 COG0642 Signal transduction histidine kinase YP_004664025.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004664026.1 COG3483 Tryptophan 2,3-dioxygenase (vermilion) YP_004664027.1 COG1672 Predicted ATPase (AAA+ superfamily) YP_004664028.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004664029.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_004664030.1 COG0784 FOG: CheY-like receiver YP_004664031.1 COG0661 Predicted unusual protein kinase YP_004664032.1 COG0515 Serine/threonine protein kinase YP_004664034.1 COG0842 ABC-type multidrug transport system, permease component YP_004664035.1 COG1131 ABC-type multidrug transport system, ATPase component YP_004664036.1 COG0642 Signal transduction histidine kinase YP_004664040.1 COG0784 FOG: CheY-like receiver YP_004664041.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_004664042.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_004664043.1 COG2770 FOG: HAMP domain YP_004664045.1 COG0784 FOG: CheY-like receiver YP_004664046.1 COG0467 RecA-superfamily ATPases implicated in signal transduction YP_004664048.1 COG1289 Predicted membrane protein YP_004664049.1 COG2031 Short chain fatty acids transporter YP_004664053.1 COG0419 ATPase involved in DNA repair YP_004664056.1 COG0657 Esterase/lipase YP_004664060.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_004664061.1 COG1032 Fe-S oxidoreductase YP_004664063.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004664064.1 COG0529 Adenylylsulfate kinase and related kinases YP_004664068.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004664069.1 COG4607 ABC-type enterochelin transport system, periplasmic component YP_004664070.1 COG4606 ABC-type enterochelin transport system, permease component YP_004664071.1 COG4605 ABC-type enterochelin transport system, permease component YP_004664072.1 COG4604 ABC-type enterochelin transport system, ATPase component YP_004664073.1 COG2124 Cytochrome P450 YP_004664074.1 COG0500 SAM-dependent methyltransferases YP_004664075.1 COG4941 Predicted RNA polymerase sigma factor containing a TPR repeat domain YP_004664076.1 COG3795 Uncharacterized protein conserved in bacteria YP_004664077.1 COG1131 ABC-type multidrug transport system, ATPase component YP_004664078.1 COG0308 Aminopeptidase N YP_004664079.1 COG2931 RTX toxins and related Ca2+-binding proteins YP_004664080.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_004664082.1 COG3832 Uncharacterized conserved protein YP_004664083.1 COG3832 Uncharacterized conserved protein YP_004664084.1 COG3357 Predicted transcriptional regulator containing an HTH domain fused to a Zn-ribbon YP_004664086.1 COG1278 Cold shock proteins YP_004664087.1 COG1628 Uncharacterized conserved protein YP_004664091.1 COG0841 Cation/multidrug efflux pump YP_004664092.1 COG0845 Membrane-fusion protein YP_004664093.1 COG1309 Transcriptional regulator YP_004664095.1 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III YP_004664097.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_004664099.1 COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold YP_004664101.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_004664103.1 COG5316 Uncharacterized conserved protein YP_004664105.1 COG4886 Leucine-rich repeat (LRR) protein YP_004664106.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_004664107.1 COG1846 Transcriptional regulators YP_004664108.1 COG4935 Regulatory P domain of the subtilisin-like proprotein convertases and other proteases YP_004664110.1 COG5020 Mannosyltransferase YP_004664112.1 COG3568 Metal-dependent hydrolase YP_004664113.1 COG1076 DnaJ-domain-containing proteins 1 YP_004664115.1 COG1002 Type II restriction enzyme, methylase subunits YP_004664116.1 COG0308 Aminopeptidase N YP_004664117.1 COG5002 Signal transduction histidine kinase YP_004664119.1 COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) YP_004664120.1 COG3803 Uncharacterized protein conserved in bacteria YP_004664122.1 COG0017 Aspartyl/asparaginyl-tRNA synthetases YP_004664123.1 COG4252 Predicted transmembrane sensor domain YP_004664125.1 COG4784 Putative Zn-dependent protease YP_004664127.1 COG1192 ATPases involved in chromosome partitioning YP_004664129.1 COG1396 Predicted transcriptional regulators YP_004664130.1 COG3239 Fatty acid desaturase YP_004664131.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_004664133.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_004664134.1 COG0642 Signal transduction histidine kinase YP_004664135.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_004664136.1 COG1309 Transcriptional regulator YP_004664137.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_004664138.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_004664141.1 COG3428 Predicted membrane protein YP_004664142.1 COG3428 Predicted membrane protein YP_004664143.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_004664144.1 COG3382 Uncharacterized conserved protein YP_004664146.1 COG0517 FOG: CBS domain YP_004664147.1 COG2376 Dihydroxyacetone kinase YP_004664148.1 COG0288 Carbonic anhydrase YP_004664149.1 COG3265 Gluconate kinase YP_004664150.1 COG1793 ATP-dependent DNA ligase YP_004664151.1 COG0515 Serine/threonine protein kinase YP_004664153.1 COG0642 Signal transduction histidine kinase YP_004664154.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_004664155.1 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein YP_004664156.1 COG0671 Membrane-associated phospholipid phosphatase YP_004664160.1 COG2314 Predicted membrane protein YP_004664161.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_004664166.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004664167.1 COG1612 Uncharacterized protein required for cytochrome oxidase assembly YP_004664168.1 COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) YP_004664169.1 COG1125 ABC-type proline/glycine betaine transport systems, ATPase components YP_004664171.1 COG0668 Small-conductance mechanosensitive channel YP_004664175.1 COG0468 RecA/RadA recombinase YP_004664178.1 COG2373 Large extracellular alpha-helical protein YP_004664180.1 COG3234 Uncharacterized protein conserved in bacteria YP_004664181.1 COG4676 Uncharacterized protein conserved in bacteria YP_004664184.1 COG0500 SAM-dependent methyltransferases YP_004664185.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_004664186.1 COG0394 Protein-tyrosine-phosphatase YP_004664188.1 COG2202 FOG: PAS/PAC domain YP_004664189.1 COG1525 Micrococcal nuclease (thermonuclease) homologs YP_004664193.1 COG2819 Predicted hydrolase of the alpha/beta superfamily YP_004664195.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_004664196.1 COG0739 Membrane proteins related to metalloendopeptidases YP_004664198.1 COG0501 Zn-dependent protease with chaperone function YP_004664200.1 COG3409 Putative peptidoglycan-binding domain-containing protein YP_004664203.1 COG4637 Predicted ATPase YP_004664204.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_004664208.1 COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_004664209.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_004664210.1 COG2129 Predicted phosphoesterases, related to the Icc protein YP_004664211.1 COG1131 ABC-type multidrug transport system, ATPase component YP_004664212.1 COG0842 ABC-type multidrug transport system, permease component YP_004664213.1 COG0515 Serine/threonine protein kinase YP_004664216.1 COG0739 Membrane proteins related to metalloendopeptidases YP_004664217.1 COG0625 Glutathione S-transferase YP_004664218.1 COG0370 Fe2+ transport system protein B YP_004664219.1 COG2850 Uncharacterized conserved protein YP_004664221.1 COG4403 Lantibiotic modifying enzyme YP_004664222.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_004664225.1 COG0296 1,4-alpha-glucan branching enzyme YP_004664226.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_004664229.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_004664230.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_004664233.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_004664234.1 COG3202 ATP/ADP translocase YP_004664235.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_004664237.1 COG1640 4-alpha-glucanotransferase YP_004664238.1 COG0841 Cation/multidrug efflux pump YP_004664239.1 COG0845 Membrane-fusion protein YP_004664241.1 COG0515 Serine/threonine protein kinase YP_004664242.1 COG0784 FOG: CheY-like receiver YP_004664244.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_004664245.1 COG1112 Superfamily I DNA and RNA helicases and helicase subunits YP_004664246.1 COG1112 Superfamily I DNA and RNA helicases and helicase subunits YP_004664247.1 COG4636 Uncharacterized protein conserved in cyanobacteria YP_004664248.1 COG0457 FOG: TPR repeat YP_004664249.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_004664250.1 COG2188 Transcriptional regulators YP_004664253.1 COG2070 Dioxygenases related to 2-nitropropane dioxygenase YP_004664256.1 COG0346 Lactoylglutathione lyase and related lyases YP_004664257.1 COG2816 NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding YP_004664258.1 COG0602 Organic radical activating enzymes YP_004664263.1 COG2827 Predicted endonuclease containing a URI domain YP_004664265.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004664266.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_004664267.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_004664268.1 COG1995 Pyridoxal phosphate biosynthesis protein YP_004664273.1 COG0006 Xaa-Pro aminopeptidase YP_004664274.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004664275.1 COG0642 Signal transduction histidine kinase YP_004664276.1 COG0784 FOG: CheY-like receiver YP_004664277.1 COG0642 Signal transduction histidine kinase YP_004664279.1 COG1544 Ribosome-associated protein Y (PSrp-1) YP_004664280.1 COG1064 Zn-dependent alcohol dehydrogenases YP_004664282.1 COG0656 Aldo/keto reductases, related to diketogulonate reductase YP_004664284.1 COG3871 Uncharacterized stress protein (general stress protein 26) YP_004664285.1 COG1260 Myo-inositol-1-phosphate synthase YP_004664287.1 COG0558 Phosphatidylglycerophosphate synthase YP_004664289.1 COG2453 Predicted protein-tyrosine phosphatase YP_004664291.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_004664292.1 COG0492 Thioredoxin reductase YP_004664295.1 COG1033 Predicted exporters of the RND superfamily YP_004664297.1 COG2258 Uncharacterized protein conserved in bacteria YP_004664301.1 COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases YP_004664302.1 COG0500 SAM-dependent methyltransferases YP_004664304.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_004664308.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_004664309.1 COG1960 Acyl-CoA dehydrogenases YP_004664310.1 COG1915 Uncharacterized conserved protein YP_004664312.1 COG2453 Predicted protein-tyrosine phosphatase YP_004664313.1 COG1388 FOG: LysM repeat YP_004664314.1 COG0583 Transcriptional regulator YP_004664315.1 COG4298 Uncharacterized protein conserved in bacteria YP_004664319.1 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT YP_004664320.1 COG1408 Predicted phosphohydrolases YP_004664322.1 COG2013 Uncharacterized conserved protein YP_004664325.1 COG3837 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_004664326.1 COG0500 SAM-dependent methyltransferases YP_004664327.1 COG0372 Citrate synthase YP_004664329.1 COG0012 Predicted GTPase, probable translation factor YP_004664330.1 COG0711 F0F1-type ATP synthase, subunit b YP_004664331.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K YP_004664332.1 COG0356 F0F1-type ATP synthase, subunit a YP_004664335.1 COG1881 Phospholipid-binding protein YP_004664336.1 COG2202 FOG: PAS/PAC domain YP_004664338.1 COG0515 Serine/threonine protein kinase YP_004664339.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_004664340.1 COG0684 Demethylmenaquinone methyltransferase YP_004664344.1 COG0582 Integrase YP_004664345.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_004664346.1 COG2764 Uncharacterized protein conserved in bacteria YP_004664348.1 COG2239 Mg/Co/Ni transporter MgtE (contains CBS domain) YP_004664350.1 COG0457 FOG: TPR repeat YP_004664352.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004664353.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004664354.1 COG2972 Predicted signal transduction protein with a C-terminal ATPase domain YP_004664355.1 COG3279 Response regulator of the LytR/AlgR family YP_004664358.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_004664359.1 COG0597 Lipoprotein signal peptidase YP_004664360.1 COG0597 Lipoprotein signal peptidase YP_004664363.1 COG1656 Uncharacterized conserved protein YP_004664365.1 COG2857 Cytochrome c1 YP_004664367.1 COG4966 Tfp pilus assembly protein PilW YP_004664369.1 COG0060 Isoleucyl-tRNA synthetase YP_004664375.1 COG1716 FOG: FHA domain YP_004664376.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_004664377.1 COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis YP_004664381.1 COG0642 Signal transduction histidine kinase YP_004664382.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_004664383.1 COG3023 Negative regulator of beta-lactamase expression YP_004664384.1 COG1768 Predicted phosphohydrolase YP_004664387.1 COG3158 K+ transporter YP_004664388.1 COG0642 Signal transduction histidine kinase YP_004664390.1 COG1398 Fatty-acid desaturase YP_004664391.1 COG2346 Truncated hemoglobins YP_004664392.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004664393.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_004664395.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_004664396.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_004664397.1 COG5383 Uncharacterized protein conserved in bacteria YP_004664399.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_004664402.1 COG4675 Microcystin-dependent protein YP_004664403.1 COG0628 Predicted permease YP_004664406.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_004664407.1 COG1398 Fatty-acid desaturase YP_004664408.1 COG3146 Uncharacterized protein conserved in bacteria YP_004664410.1 COG0642 Signal transduction histidine kinase YP_004664411.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_004664412.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_004664415.1 COG4991 Uncharacterized protein with a bacterial SH3 domain homologue YP_004664417.1 COG2771 DNA-binding HTH domain-containing proteins YP_004664418.1 COG0714 MoxR-like ATPases YP_004664422.1 COG1541 Coenzyme F390 synthetase YP_004664423.1 COG0642 Signal transduction histidine kinase YP_004664424.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_004664425.1 COG2896 Molybdenum cofactor biosynthesis enzyme YP_004664426.1 COG0367 Asparagine synthase (glutamine-hydrolyzing) YP_004664427.1 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase YP_004664429.1 COG3871 Uncharacterized stress protein (general stress protein 26) YP_004664430.1 COG3440 Predicted restriction endonuclease YP_004664433.1 COG5207 Isopeptidase T YP_004664434.1 COG0477 Permeases of the major facilitator superfamily YP_004664436.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004664437.1 COG4233 Uncharacterized protein predicted to be involved in C-type cytochrome biogenesis YP_004664438.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_004664440.1 COG0247 Fe-S oxidoreductase YP_004664441.1 COG0666 FOG: Ankyrin repeat YP_004664443.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_004664444.1 COG1913 Predicted Zn-dependent proteases YP_004664445.1 COG1690 Uncharacterized conserved protein YP_004664446.1 COG0858 Ribosome-binding factor A YP_004664447.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_004664449.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_004664450.1 COG0811 Biopolymer transport proteins YP_004664451.1 COG0848 Biopolymer transport protein YP_004664452.1 COG0848 Biopolymer transport protein YP_004664453.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_004664455.1 COG5637 Predicted integral membrane protein YP_004664456.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_004664458.1 COG1409 Predicted phosphohydrolases YP_004664460.1 COG0515 Serine/threonine protein kinase YP_004664461.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_004664463.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_004664464.1 COG0784 FOG: CheY-like receiver YP_004664465.1 COG0784 FOG: CheY-like receiver YP_004664466.1 COG0784 FOG: CheY-like receiver YP_004664467.1 COG0642 Signal transduction histidine kinase YP_004664469.1 COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase YP_004664470.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_004664471.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_004664472.1 COG1158 Transcription termination factor YP_004664480.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_004664481.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_004664482.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_004664483.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_004664486.1 COG1195 Recombinational DNA repair ATPase (RecF pathway) YP_004664487.1 COG0642 Signal transduction histidine kinase YP_004664492.1 COG3918 Predicted membrane protein YP_004664494.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog) YP_004664498.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004664499.1 COG5012 Predicted cobalamin binding protein YP_004664501.1 COG0642 Signal transduction histidine kinase YP_004664502.1 COG0784 FOG: CheY-like receiver YP_004664503.1 COG1396 Predicted transcriptional regulators YP_004664504.1 COG0840 Methyl-accepting chemotaxis protein YP_004664505.1 COG0642 Signal transduction histidine kinase YP_004664507.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_004664508.1 COG2378 Predicted transcriptional regulator YP_004664510.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_004664511.1 COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold YP_004664512.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004664514.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_004664515.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_004664516.1 COG1309 Transcriptional regulator YP_004664517.1 COG0515 Serine/threonine protein kinase YP_004664518.1 COG1396 Predicted transcriptional regulators YP_004664519.1 COG0515 Serine/threonine protein kinase YP_004664525.1 COG1522 Transcriptional regulators YP_004664526.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_004664527.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004664528.1 COG0457 FOG: TPR repeat YP_004664533.1 COG1404 Subtilisin-like serine proteases YP_004664534.1 COG0682 Prolipoprotein diacylglyceryltransferase YP_004664535.1 COG0500 SAM-dependent methyltransferases YP_004664536.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004664537.1 COG1233 Phytoene dehydrogenase and related proteins YP_004664538.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004664539.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_004664540.1 COG0607 Rhodanese-related sulfurtransferase YP_004664541.1 COG0782 Transcription elongation factor YP_004664542.1 COG0642 Signal transduction histidine kinase YP_004664543.1 COG0642 Signal transduction histidine kinase YP_004664544.1 COG2202 FOG: PAS/PAC domain YP_004664545.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_004664548.1 COG3000 Sterol desaturase YP_004664549.1 COG3682 Predicted transcriptional regulator YP_004664550.1 COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component YP_004664553.1 COG4805 Uncharacterized protein conserved in bacteria YP_004664558.1 COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases YP_004664559.1 COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains YP_004664560.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_004664561.1 COG0607 Rhodanese-related sulfurtransferase YP_004664562.1 COG0730 Predicted permeases YP_004664563.1 COG0642 Signal transduction histidine kinase YP_004664565.1 COG4785 Lipoprotein NlpI, contains TPR repeats YP_004664566.1 COG2759 Formyltetrahydrofolate synthetase YP_004664567.1 COG0840 Methyl-accepting chemotaxis protein YP_004664571.1 COG1910 Periplasmic molybdate-binding protein/domain YP_004664573.1 COG0642 Signal transduction histidine kinase YP_004664574.1 COG4117 Thiosulfate reductase cytochrome B subunit (membrane anchoring protein) YP_004664575.1 COG2041 Sulfite oxidase and related enzymes YP_004664577.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004664578.1 COG0863 DNA modification methylase YP_004664580.1 COG5006 Predicted permease, DMT superfamily YP_004664581.1 COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase YP_004664582.1 COG0642 Signal transduction histidine kinase YP_004664584.1 COG0500 SAM-dependent methyltransferases YP_004664586.1 COG0420 DNA repair exonuclease YP_004664587.1 COG4717 Uncharacterized conserved protein YP_004664588.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004664589.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_004664590.1 COG4932 Predicted outer membrane protein YP_004664593.1 COG2850 Uncharacterized conserved protein YP_004664594.1 COG2319 FOG: WD40 repeat YP_004664596.1 COG3344 Retron-type reverse transcriptase YP_004664597.1 COG1073 Hydrolases of the alpha/beta superfamily YP_004664598.1 COG2303 Choline dehydrogenase and related flavoproteins YP_004664600.1 COG0815 Apolipoprotein N-acyltransferase YP_004664607.1 COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) YP_004664609.1 COG4097 Predicted ferric reductase YP_004664610.1 COG2010 Cytochrome c, mono- and diheme variants YP_004664611.1 COG0035 Uracil phosphoribosyltransferase YP_004664613.1 COG0807 GTP cyclohydrolase II YP_004664614.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_004664616.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004664617.1 COG0583 Transcriptional regulator YP_004664622.1 COG0515 Serine/threonine protein kinase YP_004664623.1 COG1716 FOG: FHA domain YP_004664624.1 COG3271 Predicted double-glycine peptidase YP_004664625.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_004664626.1 COG3516 Uncharacterized protein conserved in bacteria YP_004664627.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_004664629.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_004664632.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_004664633.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_004664635.1 COG1396 Predicted transcriptional regulators YP_004664636.1 COG0477 Permeases of the major facilitator superfamily YP_004664637.1 COG3173 Predicted aminoglycoside phosphotransferase YP_004664639.1 COG2234 Predicted aminopeptidases YP_004664641.1 COG1479 Uncharacterized conserved protein YP_004664642.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_004664643.1 COG0642 Signal transduction histidine kinase YP_004664644.1 COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold YP_004664645.1 COG2151 Predicted metal-sulfur cluster biosynthetic enzyme YP_004664646.1 COG0625 Glutathione S-transferase YP_004664648.1 COG3173 Predicted aminoglycoside phosphotransferase YP_004664649.1 COG1960 Acyl-CoA dehydrogenases YP_004664650.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004664651.1 COG3491 Isopenicillin N synthase and related dioxygenases YP_004664652.1 COG0477 Permeases of the major facilitator superfamily YP_004664657.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_004664658.1 COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit YP_004664659.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_004664661.1 COG1309 Transcriptional regulator YP_004664662.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004664663.1 COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 YP_004664664.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_004664666.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_004664667.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_004664669.1 COG0515 Serine/threonine protein kinase YP_004664670.1 COG1309 Transcriptional regulator YP_004664671.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_004664674.1 COG1690 Uncharacterized conserved protein YP_004664676.1 COG0662 Mannose-6-phosphate isomerase YP_004664677.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_004664678.1 COG2202 FOG: PAS/PAC domain YP_004664681.1 COG0855 Polyphosphate kinase YP_004664683.1 COG4850 Uncharacterized conserved protein YP_004664685.1 COG5351 Uncharacterized protein conserved in bacteria YP_004664694.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_004664698.1 COG3387 Glucoamylase and related glycosyl hydrolases YP_004664699.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_004664702.1 COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component YP_004664703.1 COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component YP_004664704.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_004664705.1 COG0560 Phosphoserine phosphatase YP_004664707.1 COG0457 FOG: TPR repeat YP_004664709.1 COG1432 Uncharacterized conserved protein YP_004664711.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_004664713.1 COG0557 Exoribonuclease R YP_004664714.1 COG0515 Serine/threonine protein kinase YP_004664719.1 COG0515 Serine/threonine protein kinase YP_004664720.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_004664721.1 COG3509 Poly(3-hydroxybutyrate) depolymerase YP_004664724.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_004664725.1 COG3550 Uncharacterized protein related to capsule biosynthesis enzymes YP_004664727.1 COG0210 Superfamily I DNA and RNA helicases YP_004664729.1 COG0582 Integrase YP_004664730.1 COG1396 Predicted transcriptional regulators YP_004664731.1 COG4123 Predicted O-methyltransferase YP_004664733.1 COG2259 Predicted membrane protein YP_004664734.1 COG0457 FOG: TPR repeat YP_004664735.1 COG0477 Permeases of the major facilitator superfamily YP_004664739.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004664741.1 COG0612 Predicted Zn-dependent peptidases YP_004664742.1 COG0612 Predicted Zn-dependent peptidases YP_004664744.1 COG5502 Uncharacterized conserved protein YP_004664745.1 COG0517 FOG: CBS domain YP_004664747.1 COG1413 FOG: HEAT repeat YP_004664748.1 COG0593 ATPase involved in DNA replication initiation YP_004664749.1 COG1413 FOG: HEAT repeat YP_004664751.1 COG0230 Ribosomal protein L34 YP_004664752.1 COG0594 RNase P protein component YP_004664753.1 COG0759 Uncharacterized conserved protein YP_004664754.1 COG0706 Preprotein translocase subunit YidC YP_004664757.1 COG0486 Predicted GTPase YP_004664758.1 COG4636 Uncharacterized protein conserved in cyanobacteria YP_004664760.1 COG3832 Uncharacterized conserved protein YP_004664761.1 COG0640 Predicted transcriptional regulators YP_004664763.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_004664765.1 COG0616 Periplasmic serine proteases (ClpP class) YP_004664766.1 COG0612 Predicted Zn-dependent peptidases YP_004664767.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004664770.1 COG1835 Predicted acyltransferases YP_004664771.1 COG0477 Permeases of the major facilitator superfamily YP_004664772.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division YP_004664773.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division YP_004664776.1 COG1192 ATPases involved in chromosome partitioning YP_004664777.1 COG1475 Predicted transcriptional regulators YP_004664778.1 COG1664 Integral membrane protein CcmA involved in cell shape determination YP_004664781.1 COG4301 Uncharacterized conserved protein YP_004664782.1 COG1262 Uncharacterized conserved protein YP_004664785.1 COG1396 Predicted transcriptional regulators YP_004664786.1 COG1657 Squalene cyclase YP_004664788.1 COG0038 Chloride channel protein EriC YP_004664789.1 COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog YP_004664791.1 COG0500 SAM-dependent methyltransferases YP_004664802.1 COG5351 Uncharacterized protein conserved in bacteria YP_004664803.1 COG1922 Teichoic acid biosynthesis proteins YP_004664805.1 COG1045 Serine acetyltransferase YP_004664806.1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis YP_004664808.1 COG0438 Glycosyltransferase YP_004664809.1 COG0784 FOG: CheY-like receiver YP_004664811.1 COG0438 Glycosyltransferase YP_004664812.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004664813.1 COG0642 Signal transduction histidine kinase YP_004664814.1 COG0845 Membrane-fusion protein YP_004664815.1 COG3696 Putative silver efflux pump YP_004664817.1 COG1538 Outer membrane protein YP_004664818.1 COG0262 Dihydrofolate reductase YP_004664819.1 COG5031 Uncharacterized protein involved in ubiquinone biosynthesis YP_004664820.1 COG1835 Predicted acyltransferases YP_004664821.1 COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog YP_004664823.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_004664824.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_004664825.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004664826.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004664827.1 COG0500 SAM-dependent methyltransferases YP_004664828.1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis YP_004664829.1 COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis YP_004664830.1 COG0784 FOG: CheY-like receiver YP_004664833.1 COG1596 Periplasmic protein involved in polysaccharide export YP_004664834.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_004664835.1 COG2148 Sugar transferases involved in lipopolysaccharide synthesis YP_004664836.1 COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein YP_004664837.1 COG0303 Molybdopterin biosynthesis enzyme YP_004664838.1 COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A YP_004664843.1 COG1321 Mn-dependent transcriptional regulator YP_004664848.1 COG0515 Serine/threonine protein kinase YP_004664849.1 COG0515 Serine/threonine protein kinase YP_004664853.1 COG3387 Glucoamylase and related glycosyl hydrolases YP_004664854.1 COG0506 Proline dehydrogenase YP_004664855.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004664856.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_004664859.1 COG3483 Tryptophan 2,3-dioxygenase (vermilion) YP_004664860.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_004664861.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_004664862.1 COG5293 Uncharacterized protein conserved in bacteria YP_004664864.1 COG0642 Signal transduction histidine kinase YP_004664865.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_004664866.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004664867.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_004664868.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_004664869.1 COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains YP_004664871.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_004664873.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_004664874.1 COG0642 Signal transduction histidine kinase YP_004664875.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_004664876.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004664877.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_004664878.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_004664879.1 COG3829 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains YP_004664881.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_004664883.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_004664884.1 COG1388 FOG: LysM repeat YP_004664889.1 COG2353 Uncharacterized conserved protein YP_004664890.1 COG0723 Rieske Fe-S protein YP_004664891.1 COG0517 FOG: CBS domain YP_004664892.1 COG0003 Oxyanion-translocating ATPase YP_004664893.1 COG0003 Oxyanion-translocating ATPase YP_004664894.1 COG4992 Ornithine/acetylornithine aminotransferase YP_004664899.1 COG0515 Serine/threonine protein kinase YP_004664900.1 COG0515 Serine/threonine protein kinase YP_004664901.1 COG1396 Predicted transcriptional regulators YP_004664902.1 COG2202 FOG: PAS/PAC domain YP_004664903.1 COG2202 FOG: PAS/PAC domain YP_004664905.1 COG1520 FOG: WD40-like repeat YP_004664906.1 COG0784 FOG: CheY-like receiver YP_004664908.1 COG0642 Signal transduction histidine kinase YP_004664909.1 COG2199 FOG: GGDEF domain YP_004664910.1 COG5276 Uncharacterized conserved protein YP_004664911.1 COG5276 Uncharacterized conserved protein YP_004664912.1 COG5276 Uncharacterized conserved protein YP_004664913.1 COG0130 Pseudouridine synthase YP_004664914.1 COG0021 Transketolase YP_004664917.1 COG3825 Uncharacterized protein conserved in bacteria YP_004664918.1 COG0714 MoxR-like ATPases YP_004664922.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_004664928.1 COG0242 N-formylmethionyl-tRNA deformylase YP_004664932.1 COG2900 Uncharacterized protein conserved in bacteria YP_004664934.1 COG0457 FOG: TPR repeat YP_004664940.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_004664942.1 COG0578 Glycerol-3-phosphate dehydrogenase YP_004664943.1 COG1404 Subtilisin-like serine proteases YP_004664945.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004664946.1 COG1835 Predicted acyltransferases YP_004664948.1 COG1064 Zn-dependent alcohol dehydrogenases YP_004664949.1 COG0583 Transcriptional regulator YP_004664950.1 COG3899 Predicted ATPase YP_004664951.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_004664952.1 COG3682 Predicted transcriptional regulator YP_004664953.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_004664954.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_004664956.1 COG1309 Transcriptional regulator YP_004664957.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004664958.1 COG3509 Poly(3-hydroxybutyrate) depolymerase YP_004664959.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_004664960.1 COG0583 Transcriptional regulator YP_004664961.1 COG1960 Acyl-CoA dehydrogenases YP_004664962.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004664965.1 COG2821 Membrane-bound lytic murein transglycosylase YP_004664966.1 COG3491 Isopenicillin N synthase and related dioxygenases YP_004664970.1 COG1651 Protein-disulfide isomerase YP_004664973.1 COG0558 Phosphatidylglycerophosphate synthase YP_004664975.1 COG3239 Fatty acid desaturase YP_004664976.1 COG2124 Cytochrome P450 YP_004664979.1 COG1653 ABC-type sugar transport system, periplasmic component YP_004664980.1 COG1175 ABC-type sugar transport systems, permease components YP_004664981.1 COG0395 ABC-type sugar transport system, permease component YP_004664983.1 COG0515 Serine/threonine protein kinase YP_004664984.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004664985.1 COG0515 Serine/threonine protein kinase YP_004664988.1 COG1367 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) YP_004664989.1 COG1353 Predicted hydrolase of the HD superfamily (permuted catalytic motifs) YP_004664991.1 COG1336 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) YP_004664993.1 COG1604 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) YP_004664995.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_004664998.1 COG0714 MoxR-like ATPases YP_004664999.1 COG2425 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_004665000.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_004665001.1 COG4279 Uncharacterized conserved protein YP_004665002.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_004665004.1 COG0628 Predicted permease YP_004665005.1 COG0515 Serine/threonine protein kinase YP_004665012.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_004665014.1 COG3932 Uncharacterized ABC-type transport system, permease components YP_004665015.1 COG0515 Serine/threonine protein kinase YP_004665016.1 COG0500 SAM-dependent methyltransferases YP_004665017.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004665018.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_004665019.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III YP_004665020.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_004665021.1 COG0841 Cation/multidrug efflux pump YP_004665022.1 COG0845 Membrane-fusion protein YP_004665023.1 COG1538 Outer membrane protein YP_004665025.1 COG0419 ATPase involved in DNA repair YP_004665026.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004665027.1 COG3436 Transposase and inactivated derivatives YP_004665031.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_004665032.1 COG5351 Uncharacterized protein conserved in bacteria YP_004665038.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_004665039.1 COG3839 ABC-type sugar transport systems, ATPase components YP_004665043.1 COG3055 Uncharacterized protein conserved in bacteria YP_004665045.1 COG0006 Xaa-Pro aminopeptidase YP_004665048.1 COG1858 Cytochrome c peroxidase YP_004665052.1 COG1404 Subtilisin-like serine proteases YP_004665053.1 COG0515 Serine/threonine protein kinase YP_004665055.1 COG3292 Predicted periplasmic ligand-binding sensor domain YP_004665056.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_004665058.1 COG2968 Uncharacterized conserved protein YP_004665059.1 COG0582 Integrase YP_004665068.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004665069.1 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase YP_004665070.1 COG1051 ADP-ribose pyrophosphatase YP_004665072.1 COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains YP_004665073.1 COG1335 Amidases related to nicotinamidase YP_004665075.1 COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins YP_004665076.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004665077.1 COG0438 Glycosyltransferase YP_004665078.1 COG0438 Glycosyltransferase YP_004665082.1 COG4671 Predicted glycosyl transferase YP_004665084.1 COG0642 Signal transduction histidine kinase YP_004665086.1 COG0784 FOG: CheY-like receiver YP_004665088.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_004665090.1 COG1396 Predicted transcriptional regulators YP_004665092.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_004665093.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_004665098.1 COG0515 Serine/threonine protein kinase YP_004665099.1 COG0515 Serine/threonine protein kinase YP_004665100.1 COG0515 Serine/threonine protein kinase YP_004665103.1 COG1488 Nicotinic acid phosphoribosyltransferase YP_004665104.1 COG1052 Lactate dehydrogenase and related dehydrogenases YP_004665105.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_004665106.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_004665107.1 COG0515 Serine/threonine protein kinase YP_004665108.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004665109.1 COG0787 Alanine racemase YP_004665110.1 COG1560 Lauroyl/myristoyl acyltransferase YP_004665111.1 COG0308 Aminopeptidase N YP_004665112.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_004665113.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_004665114.1 COG1926 Predicted phosphoribosyltransferases YP_004665116.1 COG1371 Uncharacterized conserved protein YP_004665117.1 COG1073 Hydrolases of the alpha/beta superfamily YP_004665118.1 COG1949 Oligoribonuclease (3'->5' exoribonuclease) YP_004665119.1 COG0784 FOG: CheY-like receiver YP_004665120.1 COG0467 RecA-superfamily ATPases implicated in signal transduction YP_004665121.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_004665122.1 COG0845 Membrane-fusion protein YP_004665123.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_004665124.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_004665125.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004665126.1 COG5002 Signal transduction histidine kinase YP_004665128.1 COG3387 Glucoamylase and related glycosyl hydrolases YP_004665129.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_004665130.1 COG1546 Uncharacterized protein (competence- and mitomycin-induced) YP_004665131.1 COG0174 Glutamine synthetase YP_004665137.1 COG5351 Uncharacterized protein conserved in bacteria YP_004665141.1 COG1805 Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrB YP_004665144.1 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit YP_004665145.1 COG0642 Signal transduction histidine kinase YP_004665148.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily YP_004665152.1 COG1178 ABC-type Fe3+ transport system, permease component YP_004665153.1 COG1840 ABC-type Fe3+ transport system, periplasmic component YP_004665157.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_004665158.1 COG0412 Dienelactone hydrolase and related enzymes YP_004665163.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_004665164.1 COG0339 Zn-dependent oligopeptidases YP_004665166.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_004665168.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_004665173.1 COG1937 Uncharacterized protein conserved in bacteria YP_004665174.1 COG1062 Zn-dependent alcohol dehydrogenases, class III YP_004665175.1 COG0627 Predicted esterase YP_004665177.1 COG1349 Transcriptional regulators of sugar metabolism YP_004665178.1 COG0386 Glutathione peroxidase YP_004665182.1 COG1734 DnaK suppressor protein YP_004665184.1 COG0024 Methionine aminopeptidase YP_004665185.1 COG0500 SAM-dependent methyltransferases YP_004665191.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_004665193.1 COG1311 Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B YP_004665194.1 COG0824 Predicted thioesterase YP_004665195.1 COG0500 SAM-dependent methyltransferases YP_004665197.1 COG4323 Predicted membrane protein YP_004665198.1 COG0500 SAM-dependent methyltransferases YP_004665200.1 COG1403 Restriction endonuclease YP_004665201.1 COG1966 Carbon starvation protein, predicted membrane protein YP_004665202.1 COG2879 Uncharacterized small protein YP_004665203.1 COG0217 Uncharacterized conserved protein YP_004665204.1 COG3291 FOG: PKD repeat YP_004665205.1 COG0225 Peptide methionine sulfoxide reductase YP_004665206.1 COG0642 Signal transduction histidine kinase YP_004665207.1 COG2423 Predicted ornithine cyclodeaminase, mu-crystallin homolog YP_004665208.1 COG2270 Permeases of the major facilitator superfamily YP_004665212.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_004665214.1 COG4911 Uncharacterized conserved protein YP_004665217.1 COG1515 Deoxyinosine 3'endonuclease (endonuclease V) YP_004665218.1 COG4848 Uncharacterized protein conserved in bacteria YP_004665219.1 COG3258 Cytochrome c YP_004665220.1 COG3391 Uncharacterized conserved protein YP_004665223.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_004665224.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_004665226.1 COG2067 Long-chain fatty acid transport protein YP_004665227.1 COG1073 Hydrolases of the alpha/beta superfamily YP_004665229.1 COG1360 Flagellar motor protein YP_004665230.1 COG0435 Predicted glutathione S-transferase YP_004665231.1 COG2068 Uncharacterized MobA-related protein YP_004665233.1 COG0784 FOG: CheY-like receiver YP_004665235.1 COG2130 Putative NADP-dependent oxidoreductases YP_004665237.1 COG0546 Predicted phosphatases YP_004665238.1 COG0056 F0F1-type ATP synthase, alpha subunit YP_004665239.1 COG2202 FOG: PAS/PAC domain YP_004665240.1 COG0712 F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) YP_004665241.1 COG0443 Molecular chaperone YP_004665242.1 COG0784 FOG: CheY-like receiver YP_004665243.1 COG4880 Secreted protein containing C-terminal beta-propeller domain distantly related to WD-40 repeats YP_004665244.1 COG0534 Na+-driven multidrug efflux pump YP_004665245.1 COG4947 Uncharacterized protein conserved in bacteria YP_004665246.1 COG1203 Predicted helicases YP_004665248.1 COG2838 Monomeric isocitrate dehydrogenase YP_004665249.1 COG3649 Uncharacterized protein predicted to be involved in DNA repair YP_004665251.1 COG1468 RecB family exonuclease YP_004665252.1 COG1518 Uncharacterized protein predicted to be involved in DNA repair YP_004665253.1 COG1343 Uncharacterized protein predicted to be involved in DNA repair YP_004665257.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004665259.1 COG0714 MoxR-like ATPases YP_004665263.1 COG0784 FOG: CheY-like receiver YP_004665265.1 COG0642 Signal transduction histidine kinase YP_004665266.1 COG2202 FOG: PAS/PAC domain YP_004665267.1 COG0784 FOG: CheY-like receiver YP_004665270.1 COG1396 Predicted transcriptional regulators YP_004665272.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_004665275.1 COG0784 FOG: CheY-like receiver YP_004665276.1 COG0642 Signal transduction histidine kinase YP_004665280.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_004665281.1 COG1309 Transcriptional regulator YP_004665282.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004665283.1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) YP_004665284.1 COG1960 Acyl-CoA dehydrogenases YP_004665285.1 COG1960 Acyl-CoA dehydrogenases YP_004665286.1 COG0183 Acetyl-CoA acetyltransferase YP_004665287.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_004665288.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_004665292.1 COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain YP_004665293.1 COG0642 Signal transduction histidine kinase YP_004665296.1 COG2259 Predicted membrane protein YP_004665298.1 COG1408 Predicted phosphohydrolases YP_004665299.1 COG5002 Signal transduction histidine kinase YP_004665301.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_004665302.1 COG0784 FOG: CheY-like receiver YP_004665303.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_004665304.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004665305.1 COG0784 FOG: CheY-like receiver YP_004665306.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_004665307.1 COG0835 Chemotaxis signal transduction protein YP_004665308.1 COG0840 Methyl-accepting chemotaxis protein YP_004665309.1 COG1413 FOG: HEAT repeat YP_004665310.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_004665311.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_004665312.1 COG3239 Fatty acid desaturase YP_004665314.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004665315.1 COG2202 FOG: PAS/PAC domain YP_004665316.1 COG0642 Signal transduction histidine kinase YP_004665317.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_004665318.1 COG0840 Methyl-accepting chemotaxis protein YP_004665319.1 COG0835 Chemotaxis signal transduction protein YP_004665320.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_004665321.1 COG0835 Chemotaxis signal transduction protein YP_004665324.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_004665325.1 COG5351 Uncharacterized protein conserved in bacteria YP_004665333.1 COG0582 Integrase YP_004665335.1 COG0515 Serine/threonine protein kinase YP_004665336.1 COG1396 Predicted transcriptional regulators YP_004665337.1 COG0515 Serine/threonine protein kinase YP_004665340.1 COG0642 Signal transduction histidine kinase YP_004665341.1 COG1233 Phytoene dehydrogenase and related proteins YP_004665343.1 COG0840 Methyl-accepting chemotaxis protein YP_004665347.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_004665348.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_004665350.1 COG0666 FOG: Ankyrin repeat YP_004665351.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004665352.1 COG5337 Spore coat assembly protein YP_004665355.1 COG2949 Uncharacterized membrane protein YP_004665356.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004665357.1 COG0224 F0F1-type ATP synthase, gamma subunit YP_004665358.1 COG0055 F0F1-type ATP synthase, beta subunit YP_004665360.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) YP_004665361.1 COG2346 Truncated hemoglobins YP_004665362.1 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases YP_004665363.1 COG1959 Predicted transcriptional regulator YP_004665365.1 COG1397 ADP-ribosylglycohydrolase YP_004665368.1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 YP_004665369.1 COG1294 Cytochrome bd-type quinol oxidase, subunit 2 YP_004665370.1 COG2801 Transposase and inactivated derivatives YP_004665371.1 COG5659 FOG: Transposase YP_004665372.1 COG4771 Outer membrane receptor for ferrienterochelin and colicins YP_004665374.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004665375.1 COG0166 Glucose-6-phosphate isomerase YP_004665376.1 COG3000 Sterol desaturase YP_004665377.1 COG1309 Transcriptional regulator YP_004665378.1 COG0739 Membrane proteins related to metalloendopeptidases YP_004665379.1 COG0699 Predicted GTPases (dynamin-related) YP_004665380.1 COG1834 N-Dimethylarginine dimethylaminohydrolase YP_004665382.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_004665385.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_004665388.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004665390.1 COG2771 DNA-binding HTH domain-containing proteins YP_004665398.1 COG0412 Dienelactone hydrolase and related enzymes YP_004665399.1 COG0782 Transcription elongation factor YP_004665400.1 COG0500 SAM-dependent methyltransferases YP_004665402.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004665403.1 COG1539 Dihydroneopterin aldolase YP_004665404.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004665405.1 COG1738 Uncharacterized conserved protein YP_004665406.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004665407.1 COG3243 Poly(3-hydroxyalkanoate) synthetase YP_004665409.1 COG4636 Uncharacterized protein conserved in cyanobacteria YP_004665410.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity YP_004665411.1 COG0720 6-pyruvoyl-tetrahydropterin synthase YP_004665412.1 COG4804 Uncharacterized conserved protein YP_004665414.1 COG2202 FOG: PAS/PAC domain YP_004665415.1 COG0642 Signal transduction histidine kinase YP_004665416.1 COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase YP_004665417.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_004665418.1 COG0811 Biopolymer transport proteins YP_004665419.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_004665420.1 COG0848 Biopolymer transport protein YP_004665421.1 COG0546 Predicted phosphatases YP_004665422.1 COG3554 Uncharacterized protein conserved in bacteria YP_004665423.1 COG2314 Predicted membrane protein YP_004665424.1 COG0642 Signal transduction histidine kinase YP_004665426.1 COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease YP_004665427.1 COG0388 Predicted amidohydrolase YP_004665429.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_004665430.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004665431.1 COG0784 FOG: CheY-like receiver YP_004665433.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_004665435.1 COG3000 Sterol desaturase YP_004665436.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_004665437.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_004665447.1 COG0853 Aspartate 1-decarboxylase YP_004665449.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004665450.1 COG4555 ABC-type Na+ transport system, ATPase component YP_004665451.1 COG1668 ABC-type Na+ efflux pump, permease component YP_004665454.1 COG2225 Malate synthase YP_004665455.1 COG0308 Aminopeptidase N YP_004665457.1 COG2898 Uncharacterized conserved protein YP_004665459.1 COG1858 Cytochrome c peroxidase YP_004665460.1 COG1409 Predicted phosphohydrolases YP_004665461.1 COG3258 Cytochrome c YP_004665462.1 COG3594 Fucose 4-O-acetylase and related acetyltransferases YP_004665463.1 COG3781 Predicted membrane protein YP_004665464.1 COG4340 Uncharacterized protein conserved in bacteria YP_004665466.1 COG1505 Serine proteases of the peptidase family S9A YP_004665467.1 COG1413 FOG: HEAT repeat YP_004665469.1 COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase YP_004665470.1 COG4639 Predicted kinase YP_004665472.1 COG0345 Pyrroline-5-carboxylate reductase YP_004665473.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004665474.1 COG0522 Ribosomal protein S4 and related proteins YP_004665475.1 COG0534 Na+-driven multidrug efflux pump YP_004665477.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_004665478.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase YP_004665480.1 COG4748 Uncharacterized conserved protein YP_004665482.1 COG1396 Predicted transcriptional regulators YP_004665483.1 COG0346 Lactoylglutathione lyase and related lyases YP_004665484.1 COG3781 Predicted membrane protein YP_004665485.1 COG2155 Uncharacterized conserved protein YP_004665486.1 COG0625 Glutathione S-transferase YP_004665487.1 COG1077 Actin-like ATPase involved in cell morphogenesis YP_004665491.1 COG0475 Kef-type K+ transport systems, membrane components YP_004665492.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_004665493.1 COG0076 Glutamate decarboxylase and related PLP-dependent proteins YP_004665499.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase YP_004665500.1 COG3806 Anti-sigma factor YP_004665501.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_004665504.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_004665505.1 COG2154 Pterin-4a-carbinolamine dehydratase YP_004665507.1 COG0554 Glycerol kinase YP_004665511.1 COG5621 Predicted secreted hydrolase YP_004665512.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_004665513.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_004665514.1 COG1647 Esterase/lipase YP_004665517.1 COG0408 Coproporphyrinogen III oxidase YP_004665520.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004665521.1 COG5662 Predicted transmembrane transcriptional regulator (anti-sigma factor) YP_004665526.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_004665529.1 COG3682 Predicted transcriptional regulator YP_004665530.1 COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component YP_004665531.1 COG0457 FOG: TPR repeat YP_004665532.1 COG0583 Transcriptional regulator YP_004665533.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004665534.1 COG2133 Glucose/sorbosone dehydrogenases YP_004665535.1 COG3358 Uncharacterized conserved protein YP_004665536.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_004665541.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_004665543.1 COG2770 FOG: HAMP domain YP_004665544.1 COG0784 FOG: CheY-like receiver YP_004665545.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004665547.1 COG4249 Uncharacterized protein containing caspase domain YP_004665549.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_004665550.1 COG1420 Transcriptional regulator of heat shock gene YP_004665551.1 COG0793 Periplasmic protease YP_004665552.1 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase YP_004665554.1 COG0546 Predicted phosphatases YP_004665557.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_004665559.1 COG1199 Rad3-related DNA helicases YP_004665560.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_004665561.1 COG0583 Transcriptional regulator YP_004665562.1 COG0024 Methionine aminopeptidase YP_004665563.1 COG4244 Predicted membrane protein YP_004665569.1 COG2137 Uncharacterized protein conserved in bacteria YP_004665570.1 COG3324 Predicted enzyme related to lactoylglutathione lyase YP_004665571.1 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT YP_004665572.1 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT YP_004665573.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_004665574.1 COG1100 GTPase SAR1 and related small G proteins YP_004665575.1 COG0642 Signal transduction histidine kinase YP_004665576.1 COG0209 Ribonucleotide reductase, alpha subunit YP_004665578.1 COG3488 Predicted thiol oxidoreductase YP_004665580.1 COG0611 Thiamine monophosphate kinase YP_004665581.1 COG0840 Methyl-accepting chemotaxis protein YP_004665582.1 COG2315 Uncharacterized protein conserved in bacteria YP_004665583.1 COG0835 Chemotaxis signal transduction protein YP_004665584.1 COG0784 FOG: CheY-like receiver YP_004665585.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_004665586.1 COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation YP_004665587.1 COG1691 NCAIR mutase (PurE)-related proteins YP_004665588.1 COG1641 Uncharacterized conserved protein YP_004665589.1 COG0642 Signal transduction histidine kinase YP_004665594.1 COG4249 Uncharacterized protein containing caspase domain YP_004665596.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004665598.1 COG3335 Transposase and inactivated derivatives YP_004665599.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_004665602.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_004665604.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_004665605.1 COG0443 Molecular chaperone YP_004665607.1 COG0515 Serine/threonine protein kinase YP_004665608.1 COG3861 Uncharacterized protein conserved in bacteria YP_004665610.1 COG3861 Uncharacterized protein conserved in bacteria YP_004665611.1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component YP_004665612.1 COG0559 Branched-chain amino acid ABC-type transport system, permease components YP_004665613.1 COG4177 ABC-type branched-chain amino acid transport system, permease component YP_004665614.1 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component YP_004665615.1 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component YP_004665617.1 COG4106 Trans-aconitate methyltransferase YP_004665618.1 COG0443 Molecular chaperone YP_004665619.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_004665620.1 COG1514 2'-5' RNA ligase YP_004665621.1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) YP_004665622.1 COG0442 Prolyl-tRNA synthetase YP_004665624.1 COG1309 Transcriptional regulator YP_004665627.1 COG3568 Metal-dependent hydrolase YP_004665630.1 COG3440 Predicted restriction endonuclease YP_004665632.1 COG3950 Predicted ATP-binding protein involved in virulence YP_004665636.1 COG1002 Type II restriction enzyme, methylase subunits YP_004665637.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_004665638.1 COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster YP_004665640.1 COG1434 Uncharacterized conserved protein YP_004665641.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004665642.1 COG1846 Transcriptional regulators YP_004665643.1 COG0725 ABC-type molybdate transport system, periplasmic component YP_004665644.1 COG4149 ABC-type molybdate transport system, permease component YP_004665645.1 COG4148 ABC-type molybdate transport system, ATPase component YP_004665649.1 COG3424 Predicted naringenin-chalcone synthase YP_004665650.1 COG1755 Uncharacterized protein conserved in bacteria YP_004665651.1 COG0236 Acyl carrier protein YP_004665652.1 COG0644 Dehydrogenases (flavoproteins) YP_004665653.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_004665654.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004665655.1 COG0277 FAD/FMN-containing dehydrogenases YP_004665656.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases YP_004665657.1 COG0500 SAM-dependent methyltransferases YP_004665659.1 COG0784 FOG: CheY-like receiver YP_004665662.1 COG1225 Peroxiredoxin YP_004665664.1 COG1472 Beta-glucosidase-related glycosidases YP_004665665.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004665666.1 COG0467 RecA-superfamily ATPases implicated in signal transduction YP_004665671.1 COG0513 Superfamily II DNA and RNA helicases YP_004665672.1 COG3596 Predicted GTPase YP_004665673.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_004665678.1 COG5351 Uncharacterized protein conserved in bacteria YP_004665681.1 COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) YP_004665682.1 COG0714 MoxR-like ATPases YP_004665684.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_004665685.1 COG1559 Predicted periplasmic solute-binding protein YP_004665687.1 COG0443 Molecular chaperone YP_004665689.1 COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis YP_004665690.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_004665692.1 COG3652 Predicted outer membrane protein YP_004665693.1 COG4828 Predicted membrane protein YP_004665694.1 COG3209 Rhs family protein YP_004665695.1 COG0457 FOG: TPR repeat YP_004665696.1 COG0840 Methyl-accepting chemotaxis protein YP_004665697.1 COG1846 Transcriptional regulators YP_004665700.1 COG4690 Dipeptidase YP_004665701.1 COG1555 DNA uptake protein and related DNA-binding proteins YP_004665703.1 COG0642 Signal transduction histidine kinase YP_004665704.1 COG3287 Uncharacterized conserved protein YP_004665707.1 COG1716 FOG: FHA domain YP_004665708.1 COG4206 Outer membrane cobalamin receptor protein YP_004665710.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_004665711.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component YP_004665714.1 COG0723 Rieske Fe-S protein YP_004665715.1 COG1716 FOG: FHA domain YP_004665716.1 COG0515 Serine/threonine protein kinase YP_004665717.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components YP_004665719.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases YP_004665720.1 COG1493 Serine kinase of the HPr protein, regulates carbohydrate metabolism YP_004665721.1 COG1660 Predicted P-loop-containing kinase YP_004665724.1 COG0515 Serine/threonine protein kinase YP_004665729.1 COG3250 Beta-galactosidase/beta-glucuronidase YP_004665730.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_004665731.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_004665732.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase YP_004665733.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_004665734.1 COG0747 ABC-type dipeptide transport system, periplasmic component YP_004665735.1 COG2273 Beta-glucanase/Beta-glucan synthetase YP_004665736.1 COG1940 Transcriptional regulator/sugar kinase YP_004665739.1 COG2908 Uncharacterized protein conserved in bacteria YP_004665743.1 COG1225 Peroxiredoxin YP_004665744.1 COG2893 Phosphotransferase system, mannose/fructose-specific component IIA YP_004665745.1 COG3444 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB YP_004665746.1 COG3715 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC YP_004665747.1 COG3716 Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID YP_004665748.1 COG1925 Phosphotransferase system, HPr-related proteins YP_004665749.1 COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) YP_004665751.1 COG0199 Ribosomal protein S14 YP_004665753.1 COG0227 Ribosomal protein L28 YP_004665755.1 COG0523 Putative GTPases (G3E family) YP_004665756.1 COG0267 Ribosomal protein L33 YP_004665757.1 COG1285 Uncharacterized membrane protein YP_004665759.1 COG4123 Predicted O-methyltransferase YP_004665760.1 COG4389 Site-specific recombinase YP_004665761.1 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component YP_004665762.1 COG0192 S-adenosylmethionine synthetase YP_004665763.1 COG0499 S-adenosylhomocysteine hydrolase YP_004665764.1 COG3012 Uncharacterized protein conserved in bacteria YP_004665765.1 COG1968 Uncharacterized bacitracin resistance protein YP_004665766.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_004665769.1 COG3415 Transposase and inactivated derivatives YP_004665770.1 COG0561 Predicted hydrolases of the HAD superfamily YP_004665773.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_004665775.1 COG3415 Transposase and inactivated derivatives YP_004665776.1 COG0561 Predicted hydrolases of the HAD superfamily YP_004665778.1 COG3795 Uncharacterized protein conserved in bacteria YP_004665780.1 COG2966 Uncharacterized conserved protein YP_004665781.1 COG3119 Arylsulfatase A and related enzymes YP_004665782.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_004665783.1 COG4325 Predicted membrane protein YP_004665784.1 COG1696 Predicted membrane protein involved in D-alanine export YP_004665785.1 COG2755 Lysophospholipase L1 and related esterases YP_004665786.1 COG0836 Mannose-1-phosphate guanylyltransferase YP_004665787.1 COG0515 Serine/threonine protein kinase YP_004665788.1 COG1109 Phosphomannomutase YP_004665789.1 COG0431 Predicted flavoprotein YP_004665790.1 COG1940 Transcriptional regulator/sugar kinase YP_004665791.1 COG2077 Peroxiredoxin YP_004665792.1 COG0346 Lactoylglutathione lyase and related lyases YP_004665796.1 COG0739 Membrane proteins related to metalloendopeptidases YP_004665797.1 COG1413 FOG: HEAT repeat YP_004665798.1 COG1413 FOG: HEAT repeat YP_004665799.1 COG0673 Predicted dehydrogenases and related proteins YP_004665801.1 COG0474 Cation transport ATPase YP_004665803.1 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit YP_004665805.1 COG1538 Outer membrane protein YP_004665806.1 COG1846 Transcriptional regulators YP_004665807.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_004665808.1 COG0848 Biopolymer transport protein YP_004665809.1 COG0811 Biopolymer transport proteins YP_004665811.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_004665813.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_004665815.1 COG0714 MoxR-like ATPases YP_004665817.1 COG1131 ABC-type multidrug transport system, ATPase component YP_004665819.1 COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) YP_004665821.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_004665822.1 COG2133 Glucose/sorbosone dehydrogenases YP_004665823.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004665824.1 COG0583 Transcriptional regulator YP_004665827.1 COG2911 Uncharacterized protein conserved in bacteria YP_004665828.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_004665829.1 COG1196 Chromosome segregation ATPases YP_004665830.1 COG1640 4-alpha-glucanotransferase YP_004665831.1 COG2094 3-methyladenine DNA glycosylase YP_004665832.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004665833.1 COG5662 Predicted transmembrane transcriptional regulator (anti-sigma factor) YP_004665834.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_004665835.1 COG0586 Uncharacterized membrane-associated protein YP_004665837.1 COG1484 DNA replication protein YP_004665838.1 COG4584 Transposase and inactivated derivatives YP_004665840.1 COG0840 Methyl-accepting chemotaxis protein YP_004665842.1 COG3138 Arginine/ornithine N-succinyltransferase beta subunit YP_004665844.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_004665845.1 COG1032 Fe-S oxidoreductase YP_004665848.1 COG0313 Predicted methyltransferases YP_004665851.1 COG2224 Isocitrate lyase YP_004665852.1 COG2225 Malate synthase YP_004665853.1 COG1983 Putative stress-responsive transcriptional regulator YP_004665854.1 COG0114 Fumarase YP_004665855.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_004665859.1 COG4784 Putative Zn-dependent protease YP_004665860.1 COG0541 Signal recognition particle GTPase YP_004665861.1 COG4922 Uncharacterized protein conserved in bacteria YP_004665862.1 COG1960 Acyl-CoA dehydrogenases YP_004665863.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_004665864.1 COG0177 Predicted EndoIII-related endonuclease YP_004665865.1 COG3385 FOG: Transposase and inactivated derivatives YP_004665868.1 COG0515 Serine/threonine protein kinase YP_004665870.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_004665872.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_004665874.1 COG0515 Serine/threonine protein kinase YP_004665875.1 COG0457 FOG: TPR repeat YP_004665877.1 COG0603 Predicted PP-loop superfamily ATPase YP_004665878.1 COG2173 D-alanyl-D-alanine dipeptidase YP_004665879.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_004665880.1 COG0642 Signal transduction histidine kinase YP_004665881.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004665882.1 COG5267 Uncharacterized protein conserved in bacteria YP_004665883.1 COG1607 Acyl-CoA hydrolase YP_004665885.1 COG0183 Acetyl-CoA acetyltransferase YP_004665886.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_004665887.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_004665888.1 COG0160 4-aminobutyrate aminotransferase and related aminotransferases YP_004665889.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_004665890.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_004665891.1 COG4102 Uncharacterized protein conserved in bacteria YP_004665893.1 COG4403 Lantibiotic modifying enzyme YP_004665894.1 COG1073 Hydrolases of the alpha/beta superfamily YP_004665896.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_004665897.1 COG0005 Purine nucleoside phosphorylase YP_004665898.1 COG0182 Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family YP_004665899.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases YP_004665900.1 COG1408 Predicted phosphohydrolases YP_004665901.1 COG1716 FOG: FHA domain YP_004665903.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_004665904.1 COG0205 6-phosphofructokinase YP_004665905.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_004665906.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase YP_004665908.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_004665909.1 COG1309 Transcriptional regulator YP_004665913.1 COG2234 Predicted aminopeptidases YP_004665917.1 COG2176 DNA polymerase III, alpha subunit (gram-positive type) YP_004665918.1 COG4932 Predicted outer membrane protein YP_004665921.1 COG0277 FAD/FMN-containing dehydrogenases YP_004665922.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases YP_004665925.1 COG3591 V8-like Glu-specific endopeptidase YP_004665926.1 COG0775 Nucleoside phosphorylase YP_004665928.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_004665929.1 COG0625 Glutathione S-transferase YP_004665934.1 COG0404 Glycine cleavage system T protein (aminomethyltransferase) YP_004665935.1 COG0662 Mannose-6-phosphate isomerase YP_004665936.1 COG1651 Protein-disulfide isomerase YP_004665937.1 COG0023 Translation initiation factor 1 (eIF-1/SUI1) and related proteins YP_004665938.1 COG0148 Enolase YP_004665940.1 COG0473 Isocitrate/isopropylmalate dehydrogenase YP_004665941.1 COG5530 Predicted integral membrane protein YP_004665942.1 COG0642 Signal transduction histidine kinase YP_004665943.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004665945.1 COG0457 FOG: TPR repeat YP_004665946.1 COG0021 Transketolase YP_004665947.1 COG1396 Predicted transcriptional regulators YP_004665948.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004665949.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_004665950.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_004665951.1 COG0248 Exopolyphosphatase YP_004665955.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_004665957.1 COG0515 Serine/threonine protein kinase YP_004665958.1 COG0780 Enzyme related to GTP cyclohydrolase I YP_004665959.1 COG5002 Signal transduction histidine kinase YP_004665960.1 COG3394 Uncharacterized protein conserved in bacteria YP_004665961.1 COG3509 Poly(3-hydroxybutyrate) depolymerase YP_004665962.1 COG0515 Serine/threonine protein kinase YP_004665963.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_004665964.1 COG1225 Peroxiredoxin YP_004665965.1 COG5628 Predicted acetyltransferase YP_004665966.1 COG0438 Glycosyltransferase YP_004665967.1 COG0038 Chloride channel protein EriC YP_004665968.1 COG1398 Fatty-acid desaturase YP_004665969.1 COG1994 Zn-dependent proteases YP_004665970.1 COG0042 tRNA-dihydrouridine synthase YP_004665971.1 COG2723 Beta-glucosidase/6-phospho-beta-glucosidase/beta- galactosidase YP_004665973.1 COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP YP_004665974.1 COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component YP_004665975.1 COG0469 Pyruvate kinase YP_004665976.1 COG2206 HD-GYP domain YP_004665977.1 COG0036 Pentose-5-phosphate-3-epimerase YP_004665978.1 COG0784 FOG: CheY-like receiver YP_004665979.1 COG1357 Uncharacterized low-complexity proteins YP_004665980.1 COG0825 Acetyl-CoA carboxylase alpha subunit YP_004665981.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_004665985.1 COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase YP_004665986.1 COG1225 Peroxiredoxin YP_004665987.1 COG0583 Transcriptional regulator YP_004665988.1 COG4636 Uncharacterized protein conserved in cyanobacteria YP_004665991.1 COG0587 DNA polymerase III, alpha subunit YP_004665994.1 COG4912 Predicted DNA alkylation repair enzyme YP_004665997.1 COG3220 Uncharacterized protein conserved in bacteria YP_004666000.1 COG2342 Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase YP_004666002.1 COG1846 Transcriptional regulators YP_004666003.1 COG0038 Chloride channel protein EriC YP_004666005.1 COG1378 Predicted transcriptional regulators YP_004666006.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004666008.1 COG0500 SAM-dependent methyltransferases YP_004666009.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_004666010.1 COG0657 Esterase/lipase YP_004666011.1 COG2801 Transposase and inactivated derivatives YP_004666014.1 COG1764 Predicted redox protein, regulator of disulfide bond formation YP_004666015.1 COG3338 Carbonic anhydrase YP_004666016.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_004666017.1 COG4539 Predicted membrane protein YP_004666018.1 COG1509 Lysine 2,3-aminomutase YP_004666019.1 COG3344 Retron-type reverse transcriptase YP_004666022.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_004666023.1 COG1309 Transcriptional regulator YP_004666027.1 COG0346 Lactoylglutathione lyase and related lyases YP_004666028.1 COG1309 Transcriptional regulator YP_004666030.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_004666031.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_004666033.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_004666034.1 COG0693 Putative intracellular protease/amidase YP_004666035.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_004666036.1 COG3865 Uncharacterized protein conserved in bacteria YP_004666037.1 COG0421 Spermidine synthase YP_004666040.1 COG5574 RING-finger-containing E3 ubiquitin ligase YP_004666044.1 COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain YP_004666045.1 COG0642 Signal transduction histidine kinase YP_004666046.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_004666047.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity YP_004666050.1 COG3182 Uncharacterized iron-regulated membrane protein YP_004666052.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_004666053.1 COG4124 Beta-mannanase YP_004666054.1 COG0060 Isoleucyl-tRNA synthetase YP_004666057.1 COG2849 Uncharacterized protein conserved in bacteria YP_004666058.1 COG5640 Secreted trypsin-like serine protease YP_004666059.1 COG0640 Predicted transcriptional regulators YP_004666061.1 COG5659 FOG: Transposase YP_004666064.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004666067.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_004666072.1 COG0419 ATPase involved in DNA repair YP_004666074.1 COG0438 Glycosyltransferase YP_004666075.1 COG2120 Uncharacterized proteins, LmbE homologs YP_004666076.1 COG4365 Uncharacterized protein conserved in bacteria YP_004666077.1 COG2120 Uncharacterized proteins, LmbE homologs YP_004666079.1 COG0591 Na+/proline symporter YP_004666081.1 COG0753 Catalase YP_004666083.1 COG1760 L-serine deaminase YP_004666088.1 COG0515 Serine/threonine protein kinase YP_004666090.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_004666091.1 COG0004 Ammonia permease YP_004666093.1 COG0346 Lactoylglutathione lyase and related lyases YP_004666094.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_004666096.1 COG0515 Serine/threonine protein kinase YP_004666098.1 COG1716 FOG: FHA domain YP_004666103.1 COG2133 Glucose/sorbosone dehydrogenases YP_004666104.1 COG0322 Nuclease subunit of the excinuclease complex YP_004666106.1 COG0346 Lactoylglutathione lyase and related lyases YP_004666107.1 COG0625 Glutathione S-transferase YP_004666109.1 COG4295 Uncharacterized protein conserved in bacteria YP_004666113.1 COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) YP_004666116.1 COG2202 FOG: PAS/PAC domain YP_004666119.1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) YP_004666121.1 COG0546 Predicted phosphatases YP_004666123.1 COG2068 Uncharacterized MobA-related protein YP_004666124.1 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family YP_004666127.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_004666128.1 COG3227 Zinc metalloprotease (elastase) YP_004666129.1 COG1409 Predicted phosphohydrolases YP_004666131.1 COG1396 Predicted transcriptional regulators YP_004666132.1 COG3372 Uncharacterized conserved protein YP_004666133.1 COG1061 DNA or RNA helicases of superfamily II YP_004666134.1 COG3238 Uncharacterized protein conserved in bacteria YP_004666135.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004666138.1 COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold YP_004666139.1 COG3385 FOG: Transposase and inactivated derivatives YP_004666140.1 COG0727 Predicted Fe-S-cluster oxidoreductase YP_004666142.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_004666146.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_004666147.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_004666148.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_004666149.1 COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems YP_004666152.1 COG2010 Cytochrome c, mono- and diheme variants YP_004666154.1 COG5557 Polysulphide reductase YP_004666155.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_004666158.1 COG1403 Restriction endonuclease YP_004666159.1 COG1407 Predicted ICC-like phosphoesterases YP_004666160.1 COG1201 Lhr-like helicases YP_004666161.1 COG1793 ATP-dependent DNA ligase YP_004666162.1 COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing YP_004666163.1 COG0147 Anthranilate/para-aminobenzoate synthases component I YP_004666164.1 COG0512 Anthranilate/para-aminobenzoate synthases component II YP_004666165.1 COG0406 Fructose-2,6-bisphosphatase YP_004666168.1 COG1572 Uncharacterized conserved protein YP_004666169.1 COG0159 Tryptophan synthase alpha chain YP_004666170.1 COG0133 Tryptophan synthase beta chain YP_004666171.1 COG0135 Phosphoribosylanthranilate isomerase YP_004666172.1 COG0134 Indole-3-glycerol phosphate synthase YP_004666173.1 COG0547 Anthranilate phosphoribosyltransferase YP_004666174.1 COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_004666175.1 COG1233 Phytoene dehydrogenase and related proteins YP_004666177.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004666178.1 COG3607 Predicted lactoylglutathione lyase YP_004666179.1 COG2819 Predicted hydrolase of the alpha/beta superfamily YP_004666180.1 COG3527 Alpha-acetolactate decarboxylase YP_004666181.1 COG0583 Transcriptional regulator YP_004666182.1 COG3004 Na+/H+ antiporter YP_004666183.1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs YP_004666184.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs YP_004666185.1 COG0642 Signal transduction histidine kinase YP_004666186.1 COG0457 FOG: TPR repeat YP_004666187.1 COG0326 Molecular chaperone, HSP90 family YP_004666190.1 COG3239 Fatty acid desaturase YP_004666191.1 COG2041 Sulfite oxidase and related enzymes YP_004666192.1 COG2717 Predicted membrane protein YP_004666193.1 COG0784 FOG: CheY-like receiver YP_004666195.1 COG0457 FOG: TPR repeat YP_004666196.1 COG0515 Serine/threonine protein kinase YP_004666197.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component YP_004666198.1 COG4935 Regulatory P domain of the subtilisin-like proprotein convertases and other proteases YP_004666199.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_004666201.1 COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases YP_004666202.1 COG1278 Cold shock proteins YP_004666203.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_004666204.1 COG0104 Adenylosuccinate synthase YP_004666205.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_004666206.1 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes YP_004666207.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH) YP_004666208.1 COG0784 FOG: CheY-like receiver YP_004666209.1 COG0784 FOG: CheY-like receiver YP_004666210.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_004666212.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_004666213.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_004666214.1 COG0840 Methyl-accepting chemotaxis protein YP_004666215.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_004666216.1 COG2127 Uncharacterized conserved protein YP_004666217.1 COG3146 Uncharacterized protein conserved in bacteria YP_004666218.1 COG0407 Uroporphyrinogen-III decarboxylase YP_004666219.1 COG0513 Superfamily II DNA and RNA helicases YP_004666220.1 COG0694 Thioredoxin-like proteins and domains YP_004666221.1 COG0500 SAM-dependent methyltransferases YP_004666222.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_004666223.1 COG0116 Predicted N6-adenine-specific DNA methylase YP_004666224.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_004666225.1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 YP_004666226.1 COG0642 Signal transduction histidine kinase YP_004666228.1 COG2214 DnaJ-class molecular chaperone YP_004666229.1 COG0784 FOG: CheY-like receiver YP_004666230.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_004666231.1 COG4377 Predicted membrane protein YP_004666232.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004666234.1 COG5459 Predicted rRNA methylase YP_004666235.1 COG4586 ABC-type uncharacterized transport system, ATPase component YP_004666236.1 COG4587 ABC-type uncharacterized transport system, permease component YP_004666237.1 COG3694 ABC-type uncharacterized transport system, permease component YP_004666238.1 COG4607 ABC-type enterochelin transport system, periplasmic component YP_004666240.1 COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold YP_004666241.1 COG1796 DNA polymerase IV (family X) YP_004666242.1 COG0642 Signal transduction histidine kinase YP_004666243.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004666245.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_004666246.1 COG4108 Peptide chain release factor RF-3 YP_004666248.1 COG0642 Signal transduction histidine kinase YP_004666250.1 COG2317 Zn-dependent carboxypeptidase YP_004666252.1 COG1145 Ferredoxin YP_004666253.1 COG4122 Predicted O-methyltransferase YP_004666255.1 COG0349 Ribonuclease D YP_004666256.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_004666258.1 COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component YP_004666259.1 COG3791 Uncharacterized conserved protein YP_004666260.1 COG0515 Serine/threonine protein kinase YP_004666262.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004666264.1 COG1112 Superfamily I DNA and RNA helicases and helicase subunits YP_004666265.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_004666267.1 COG4639 Predicted kinase YP_004666271.1 COG2340 Uncharacterized protein with SCP/PR1 domains YP_004666272.1 COG0793 Periplasmic protease YP_004666273.1 COG0477 Permeases of the major facilitator superfamily YP_004666275.1 COG0671 Membrane-associated phospholipid phosphatase YP_004666276.1 COG3239 Fatty acid desaturase YP_004666277.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_004666280.1 COG1331 Highly conserved protein containing a thioredoxin domain YP_004666281.1 COG1305 Transglutaminase-like enzymes, putative cysteine proteases YP_004666282.1 COG0456 Acetyltransferases YP_004666283.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_004666284.1 COG1078 HD superfamily phosphohydrolases YP_004666285.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_004666288.1 COG2010 Cytochrome c, mono- and diheme variants YP_004666291.1 COG0262 Dihydrofolate reductase YP_004666292.1 COG0207 Thymidylate synthase YP_004666293.1 COG2096 Uncharacterized conserved protein YP_004666294.1 COG1600 Uncharacterized Fe-S protein YP_004666295.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_004666296.1 COG3826 Uncharacterized protein conserved in bacteria YP_004666297.1 COG3145 Alkylated DNA repair protein YP_004666298.1 COG3591 V8-like Glu-specific endopeptidase YP_004666300.1 COG0005 Purine nucleoside phosphorylase YP_004666301.1 COG1295 Predicted membrane protein YP_004666302.1 COG4783 Putative Zn-dependent protease, contains TPR repeats YP_004666303.1 COG0266 Formamidopyrimidine-DNA glycosylase YP_004666306.1 COG0019 Diaminopimelate decarboxylase YP_004666307.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_004666308.1 COG0289 Dihydrodipicolinate reductase YP_004666309.1 COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) YP_004666310.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_004666311.1 COG0457 FOG: TPR repeat YP_004666312.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation YP_004666313.1 COG0176 Transaldolase YP_004666314.1 COG1960 Acyl-CoA dehydrogenases YP_004666315.1 COG2086 Electron transfer flavoprotein, beta subunit YP_004666316.1 COG2025 Electron transfer flavoprotein, alpha subunit YP_004666318.1 COG1247 Sortase and related acyltransferases YP_004666319.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_004666320.1 COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing YP_004666322.1 COG1357 Uncharacterized low-complexity proteins YP_004666323.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_004666324.1 COG5009 Membrane carboxypeptidase/penicillin-binding protein YP_004666325.1 COG0284 Orotidine-5'-phosphate decarboxylase YP_004666326.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004666327.1 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein YP_004666328.1 COG0840 Methyl-accepting chemotaxis protein YP_004666329.1 COG2814 Arabinose efflux permease YP_004666330.1 COG1826 Sec-independent protein secretion pathway components YP_004666331.1 COG0805 Sec-independent protein secretion pathway component TatC YP_004666332.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_004666333.1 COG2021 Homoserine acetyltransferase YP_004666335.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_004666336.1 COG0406 Fructose-2,6-bisphosphatase YP_004666337.1 COG3173 Predicted aminoglycoside phosphotransferase YP_004666338.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004666339.1 COG1960 Acyl-CoA dehydrogenases YP_004666340.1 COG0583 Transcriptional regulator YP_004666341.1 COG0863 DNA modification methylase YP_004666342.1 COG2017 Galactose mutarotase and related enzymes YP_004666343.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_004666344.1 COG2072 Predicted flavoprotein involved in K+ transport YP_004666345.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_004666346.1 COG4266 Allantoicase YP_004666347.1 COG3195 Uncharacterized protein conserved in bacteria YP_004666348.1 COG2351 Transthyretin-like protein YP_004666349.1 COG3189 Uncharacterized conserved protein YP_004666350.1 COG0784 FOG: CheY-like receiver YP_004666352.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004666353.1 COG0515 Serine/threonine protein kinase YP_004666354.1 COG3917 2-hydroxychromene-2-carboxylate isomerase YP_004666356.1 COG0183 Acetyl-CoA acetyltransferase YP_004666359.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_004666360.1 COG1719 Predicted hydrocarbon binding protein (contains V4R domain) YP_004666361.1 COG3384 Uncharacterized conserved protein YP_004666362.1 COG2353 Uncharacterized conserved protein YP_004666364.1 COG1486 Alpha-galactosidases/6-phospho-beta-glucosidases, family 4 of glycosyl hydrolases YP_004666365.1 COG1171 Threonine dehydratase YP_004666366.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_004666367.1 COG1396 Predicted transcriptional regulators YP_004666368.1 COG0513 Superfamily II DNA and RNA helicases YP_004666369.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_004666371.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_004666377.1 COG2032 Cu/Zn superoxide dismutase YP_004666378.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_004666379.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_004666380.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component YP_004666382.1 COG4552 Predicted acetyltransferase involved in intracellular survival and related acetyltransferases YP_004666383.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_004666384.1 COG3831 Uncharacterized conserved protein YP_004666386.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_004666387.1 COG0642 Signal transduction histidine kinase YP_004666390.1 COG0587 DNA polymerase III, alpha subunit YP_004666391.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_004666392.1 COG0287 Prephenate dehydrogenase YP_004666393.1 COG0826 Collagenase and related proteases YP_004666394.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004666396.1 COG0339 Zn-dependent oligopeptidases YP_004666397.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_004666398.1 COG4319 Ketosteroid isomerase homolog YP_004666399.1 COG0058 Glucan phosphorylase YP_004666401.1 COG0739 Membrane proteins related to metalloendopeptidases YP_004666402.1 COG2719 Uncharacterized conserved protein YP_004666403.1 COG2718 Uncharacterized conserved protein YP_004666404.1 COG2766 Putative Ser protein kinase YP_004666407.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) YP_004666409.1 COG0457 FOG: TPR repeat YP_004666410.1 COG0501 Zn-dependent protease with chaperone function YP_004666411.1 COG0457 FOG: TPR repeat YP_004666412.1 COG0003 Oxyanion-translocating ATPase YP_004666413.1 COG0003 Oxyanion-translocating ATPase YP_004666414.1 COG1196 Chromosome segregation ATPases YP_004666415.1 COG1192 ATPases involved in chromosome partitioning YP_004666416.1 COG5394 Uncharacterized protein conserved in bacteria YP_004666421.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_004666423.1 COG0793 Periplasmic protease YP_004666424.1 COG2981 Uncharacterized protein involved in cysteine biosynthesis YP_004666425.1 COG3572 Gamma-glutamylcysteine synthetase YP_004666427.1 COG0443 Molecular chaperone YP_004666430.1 COG0013 Alanyl-tRNA synthetase YP_004666431.1 COG3209 Rhs family protein YP_004666432.1 COG5659 FOG: Transposase YP_004666433.1 COG3436 Transposase and inactivated derivatives YP_004666434.1 COG3436 Transposase and inactivated derivatives YP_004666435.1 COG4584 Transposase and inactivated derivatives YP_004666436.1 COG1484 DNA replication protein YP_004666439.1 COG0515 Serine/threonine protein kinase YP_004666441.1 COG1396 Predicted transcriptional regulators YP_004666442.1 COG1396 Predicted transcriptional regulators YP_004666443.1 COG0515 Serine/threonine protein kinase YP_004666451.1 COG2801 Transposase and inactivated derivatives YP_004666453.1 COG0144 tRNA and rRNA cytosine-C5-methylases YP_004666454.1 COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF YP_004666455.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_004666456.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_004666457.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004666458.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_004666459.1 COG1596 Periplasmic protein involved in polysaccharide export YP_004666463.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_004666466.1 COG0457 FOG: TPR repeat YP_004666467.1 COG1729 Uncharacterized protein conserved in bacteria YP_004666468.1 COG0457 FOG: TPR repeat YP_004666470.1 COG1100 GTPase SAR1 and related small G proteins YP_004666471.1 COG2018 Uncharacterized distant relative of homeotic protein bithoraxoid YP_004666474.1 COG0515 Serine/threonine protein kinase YP_004666475.1 COG0353 Recombinational DNA repair protein (RecF pathway) YP_004666476.1 COG0718 Uncharacterized protein conserved in bacteria YP_004666479.1 COG2812 DNA polymerase III, gamma/tau subunits YP_004666481.1 COG0590 Cytosine/adenosine deaminases YP_004666482.1 COG0172 Seryl-tRNA synthetase YP_004666483.1 COG0457 FOG: TPR repeat YP_004666484.1 COG1232 Protoporphyrinogen oxidase YP_004666485.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_004666486.1 COG0726 Predicted xylanase/chitin deacetylase YP_004666487.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_004666488.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_004666490.1 COG0457 FOG: TPR repeat YP_004666492.1 COG0514 Superfamily II DNA helicase YP_004666494.1 COG2003 DNA repair proteins YP_004666495.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_004666496.1 COG0492 Thioredoxin reductase YP_004666497.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_004666498.1 COG0315 Molybdenum cofactor biosynthesis enzyme YP_004666500.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_004666501.1 COG2912 Uncharacterized conserved protein YP_004666506.1 COG1832 Predicted CoA-binding protein YP_004666507.1 COG1404 Subtilisin-like serine proteases YP_004666509.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_004666510.1 COG0640 Predicted transcriptional regulators YP_004666511.1 COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain YP_004666516.1 COG1194 A/G-specific DNA glycosylase YP_004666517.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004666518.1 COG2887 RecB family exonuclease YP_004666519.1 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 YP_004666520.1 COG0084 Mg-dependent DNase YP_004666526.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_004666527.1 COG0457 FOG: TPR repeat YP_004666528.1 COG1092 Predicted SAM-dependent methyltransferases YP_004666531.1 COG0210 Superfamily I DNA and RNA helicases YP_004666532.1 COG0102 Ribosomal protein L13 YP_004666533.1 COG0103 Ribosomal protein S9 YP_004666534.1 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT YP_004666536.1 COG2137 Uncharacterized protein conserved in bacteria YP_004666537.1 COG4105 DNA uptake lipoprotein YP_004666539.1 COG0457 FOG: TPR repeat YP_004666540.1 COG1716 FOG: FHA domain YP_004666541.1 COG0709 Selenophosphate synthase YP_004666542.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_004666543.1 COG0689 RNase PH YP_004666544.1 COG0127 Xanthosine triphosphate pyrophosphatase YP_004666546.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) YP_004666547.1 COG0740 Protease subunit of ATP-dependent Clp proteases YP_004666548.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_004666549.1 COG1505 Serine proteases of the peptidase family S9A YP_004666550.1 COG0466 ATP-dependent Lon protease, bacterial type YP_004666551.1 COG4166 ABC-type oligopeptide transport system, periplasmic component YP_004666552.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_004666553.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components YP_004666554.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004666555.1 COG1678 Putative transcriptional regulator YP_004666556.1 COG0271 Stress-induced morphogen (activity unknown) YP_004666557.1 COG0278 Glutaredoxin-related protein YP_004666559.1 COG0006 Xaa-Pro aminopeptidase YP_004666560.1 COG1385 Uncharacterized protein conserved in bacteria YP_004666561.1 COG3148 Uncharacterized conserved protein YP_004666562.1 COG3712 Fe2+-dicitrate sensor, membrane component YP_004666563.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004666565.1 COG1092 Predicted SAM-dependent methyltransferases YP_004666566.1 COG1573 Uracil-DNA glycosylase YP_004666567.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_004666568.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases YP_004666570.1 COG2070 Dioxygenases related to 2-nitropropane dioxygenase YP_004666572.1 COG2030 Acyl dehydratase YP_004666573.1 COG0031 Cysteine synthase YP_004666574.1 COG3178 Predicted phosphotransferase related to Ser/Thr protein kinases YP_004666575.1 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) YP_004666576.1 COG0631 Serine/threonine protein phosphatase YP_004666577.1 COG1430 Uncharacterized conserved protein YP_004666578.1 COG0219 Predicted rRNA methylase (SpoU class) YP_004666582.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_004666583.1 COG0784 FOG: CheY-like receiver YP_004666584.1 COG0533 Metal-dependent proteases with possible chaperone activity YP_004666585.1 COG0030 Dimethyladenosine transferase (rRNA methylation) YP_004666587.1 COG1428 Deoxynucleoside kinases YP_004666588.1 COG0413 Ketopantoate hydroxymethyltransferase YP_004666589.1 COG0414 Panthothenate synthetase YP_004666590.1 COG0691 tmRNA-binding protein YP_004666591.1 COG2969 Stringent starvation protein B YP_004666592.1 COG0515 Serine/threonine protein kinase YP_004666593.1 COG3536 Uncharacterized protein conserved in bacteria YP_004666594.1 COG0840 Methyl-accepting chemotaxis protein YP_004666597.1 COG0388 Predicted amidohydrolase YP_004666598.1 COG0779 Uncharacterized protein conserved in bacteria YP_004666599.1 COG0195 Transcription elongation factor YP_004666600.1 COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination YP_004666603.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_004666604.1 COG1550 Uncharacterized protein conserved in bacteria YP_004666605.1 COG0858 Ribosome-binding factor A YP_004666606.1 COG0130 Pseudouridine synthase YP_004666607.1 COG0184 Ribosomal protein S15P/S13E YP_004666608.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) YP_004666610.1 COG0739 Membrane proteins related to metalloendopeptidases YP_004666611.1 COG0756 dUTPase YP_004666612.1 COG0515 Serine/threonine protein kinase YP_004666613.1 COG2984 ABC-type uncharacterized transport system, periplasmic component YP_004666614.1 COG0015 Adenylosuccinate lyase YP_004666615.1 COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase YP_004666617.1 COG0565 rRNA methylase YP_004666619.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004666622.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004666623.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_004666624.1 COG0612 Predicted Zn-dependent peptidases YP_004666625.1 COG0612 Predicted Zn-dependent peptidases YP_004666626.1 COG0582 Integrase YP_004666637.1 COG0160 4-aminobutyrate aminotransferase and related aminotransferases YP_004666646.1 COG0618 Exopolyphosphatase-related proteins YP_004666647.1 COG1186 Protein chain release factor B YP_004666649.1 COG3501 Uncharacterized protein conserved in bacteria YP_004666650.1 COG3521 Uncharacterized protein conserved in bacteria YP_004666651.1 COG3522 Uncharacterized protein conserved in bacteria YP_004666654.1 COG4695 Phage-related protein YP_004666657.1 COG4108 Peptide chain release factor RF-3 YP_004666661.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_004666663.1 COG0863 DNA modification methylase YP_004666666.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_004666668.1 COG4570 Holliday junction resolvase YP_004666682.1 COG1282 NAD/NADP transhydrogenase beta subunit YP_004666683.1 COG3436 Transposase and inactivated derivatives YP_004666685.1 COG0180 Tryptophanyl-tRNA synthetase YP_004666687.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_004666691.1 COG2890 Methylase of polypeptide chain release factors YP_004666693.1 COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain YP_004666694.1 COG0412 Dienelactone hydrolase and related enzymes YP_004666697.1 COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins YP_004666699.1 COG0500 SAM-dependent methyltransferases YP_004666700.1 COG1404 Subtilisin-like serine proteases YP_004666703.1 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs YP_004666704.1 COG0532 Translation initiation factor 2 (IF-2; GTPase) YP_004666705.1 COG3795 Uncharacterized protein conserved in bacteria YP_004666707.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_004666708.1 COG1643 HrpA-like helicases YP_004666710.1 COG3409 Putative peptidoglycan-binding domain-containing protein YP_004666714.1 COG0438 Glycosyltransferase YP_004666718.1 COG3812 Uncharacterized protein conserved in bacteria YP_004666719.1 COG0726 Predicted xylanase/chitin deacetylase YP_004666721.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004666722.1 COG2128 Uncharacterized conserved protein YP_004666723.1 COG1032 Fe-S oxidoreductase YP_004666724.1 COG2133 Glucose/sorbosone dehydrogenases YP_004666725.1 COG5649 Uncharacterized conserved protein YP_004666729.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004666732.1 COG0457 FOG: TPR repeat YP_004666733.1 COG1268 Uncharacterized conserved protein YP_004666734.1 COG4731 Uncharacterized protein conserved in bacteria YP_004666735.1 COG3303 Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit YP_004666736.1 COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit YP_004666737.1 COG0513 Superfamily II DNA and RNA helicases YP_004666738.1 COG4932 Predicted outer membrane protein YP_004666741.1 COG3653 N-acyl-D-aspartate/D-glutamate deacylase YP_004666744.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_004666745.1 COG3176 Putative hemolysin YP_004666746.1 COG0819 Putative transcription activator YP_004666748.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_004666749.1 COG0840 Methyl-accepting chemotaxis protein YP_004666750.1 COG0840 Methyl-accepting chemotaxis protein YP_004666752.1 COG1741 Pirin-related protein YP_004666753.1 COG4912 Predicted DNA alkylation repair enzyme YP_004666754.1 COG0730 Predicted permeases YP_004666755.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_004666756.1 COG3049 Penicillin V acylase and related amidases YP_004666757.1 COG0513 Superfamily II DNA and RNA helicases YP_004666758.1 COG3391 Uncharacterized conserved protein YP_004666759.1 COG3047 Outer membrane protein W YP_004666760.1 COG0500 SAM-dependent methyltransferases YP_004666761.1 COG0840 Methyl-accepting chemotaxis protein YP_004666762.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_004666763.1 COG0277 FAD/FMN-containing dehydrogenases YP_004666764.1 COG2319 FOG: WD40 repeat YP_004666767.1 COG4932 Predicted outer membrane protein YP_004666769.1 COG4175 ABC-type proline/glycine betaine transport system, ATPase component YP_004666770.1 COG4176 ABC-type proline/glycine betaine transport system, permease component YP_004666771.1 COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components YP_004666772.1 COG3869 Arginine kinase YP_004666775.1 COG0515 Serine/threonine protein kinase YP_004666776.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004666777.1 COG1716 FOG: FHA domain YP_004666778.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_004666779.1 COG0457 FOG: TPR repeat YP_004666781.1 COG0457 FOG: TPR repeat YP_004666782.1 COG4651 Kef-type K+ transport system, predicted NAD-binding component YP_004666783.1 COG2185 Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) YP_004666784.1 COG1703 Putative periplasmic protein kinase ArgK and related GTPases of G3E family YP_004666785.1 COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit YP_004666786.1 COG1884 Methylmalonyl-CoA mutase, N-terminal domain/subunit YP_004666787.1 COG0328 Ribonuclease HI YP_004666788.1 COG2761 Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis YP_004666789.1 COG2070 Dioxygenases related to 2-nitropropane dioxygenase YP_004666790.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_004666793.1 COG3189 Uncharacterized conserved protein YP_004666796.1 COG1162 Predicted GTPases YP_004666797.1 COG2358 TRAP-type uncharacterized transport system, periplasmic component YP_004666800.1 COG0527 Aspartokinases YP_004666802.1 COG0306 Phosphate/sulphate permeases YP_004666803.1 COG1392 Phosphate transport regulator (distant homolog of PhoU) YP_004666804.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_004666805.1 COG0042 tRNA-dihydrouridine synthase YP_004666806.1 COG0457 FOG: TPR repeat YP_004666807.1 COG0427 Acetyl-CoA hydrolase YP_004666808.1 COG0339 Zn-dependent oligopeptidases YP_004666809.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_004666810.1 COG3325 Chitinase YP_004666811.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_004666812.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_004666814.1 COG0457 FOG: TPR repeat YP_004666817.1 COG0477 Permeases of the major facilitator superfamily YP_004666818.1 COG0500 SAM-dependent methyltransferases YP_004666820.1 COG0017 Aspartyl/asparaginyl-tRNA synthetases YP_004666825.1 COG0813 Purine-nucleoside phosphorylase YP_004666826.1 COG3770 Murein endopeptidase YP_004666828.1 COG0513 Superfamily II DNA and RNA helicases YP_004666830.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_004666833.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_004666834.1 COG1718 Serine/threonine protein kinase involved in cell cycle control YP_004666835.1 COG5126 Ca2+-binding protein (EF-Hand superfamily) YP_004666836.1 COG0642 Signal transduction histidine kinase YP_004666837.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_004666838.1 COG3541 Predicted nucleotidyltransferase YP_004666840.1 COG3541 Predicted nucleotidyltransferase YP_004666842.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_004666843.1 COG3228 Uncharacterized protein conserved in bacteria YP_004666844.1 COG1072 Panthothenate kinase YP_004666845.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_004666846.1 COG0457 FOG: TPR repeat YP_004666847.1 COG2153 Predicted acyltransferase YP_004666848.1 COG3180 Putative ammonia monooxygenase YP_004666849.1 COG0846 NAD-dependent protein deacetylases, SIR2 family YP_004666850.1 COG3031 Type II secretory pathway, component PulC YP_004666851.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_004666853.1 COG0500 SAM-dependent methyltransferases YP_004666854.1 COG0155 Sulfite reductase, beta subunit (hemoprotein) YP_004666855.1 COG0369 Sulfite reductase, alpha subunit (flavoprotein) YP_004666856.1 COG2895 GTPases - Sulfate adenylate transferase subunit 1 YP_004666857.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_004666858.1 COG0007 Uroporphyrinogen-III methylase YP_004666859.1 COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) YP_004666860.1 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes YP_004666866.1 COG3687 Predicted metal-dependent hydrolase YP_004666868.1 COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain YP_004666871.1 COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase YP_004666872.1 COG0517 FOG: CBS domain YP_004666873.1 COG0441 Threonyl-tRNA synthetase YP_004666874.1 COG1297 Predicted membrane protein YP_004666875.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_004666878.1 COG0027 Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) YP_004666879.1 COG0019 Diaminopimelate decarboxylase YP_004666880.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_004666882.1 COG2935 Putative arginyl-tRNA:protein arginylyltransferase YP_004666883.1 COG1073 Hydrolases of the alpha/beta superfamily YP_004666884.1 COG0438 Glycosyltransferase YP_004666885.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_004666886.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_004666887.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_004666888.1 COG2202 FOG: PAS/PAC domain YP_004666889.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_004666890.1 COG2203 FOG: GAF domain YP_004666891.1 COG3663 G:T/U mismatch-specific DNA glycosylase YP_004666892.1 COG1105 Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) YP_004666894.1 COG2363 Uncharacterized small membrane protein YP_004666895.1 COG2940 Proteins containing SET domain YP_004666896.1 COG1960 Acyl-CoA dehydrogenases YP_004666899.1 COG1362 Aspartyl aminopeptidase YP_004666901.1 COG2943 Membrane glycosyltransferase YP_004666903.1 COG3131 Periplasmic glucans biosynthesis protein YP_004666904.1 COG2202 FOG: PAS/PAC domain YP_004666906.1 COG0178 Excinuclease ATPase subunit YP_004666907.1 COG0386 Glutathione peroxidase YP_004666908.1 COG1609 Transcriptional regulators YP_004666912.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004666913.1 COG5016 Pyruvate/oxaloacetate carboxyltransferase YP_004666914.1 COG1225 Peroxiredoxin YP_004666915.1 COG1944 Uncharacterized conserved protein YP_004666916.1 COG3482 Uncharacterized conserved protein YP_004666917.1 COG0515 Serine/threonine protein kinase YP_004666920.1 COG0863 DNA modification methylase YP_004666922.1 COG1301 Na+/H+-dicarboxylate symporters YP_004666923.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_004666924.1 COG1297 Predicted membrane protein YP_004666926.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_004666927.1 COG0480 Translation elongation factors (GTPases) YP_004666930.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_004666931.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_004666933.1 COG0565 rRNA methylase YP_004666934.1 COG2373 Large extracellular alpha-helical protein YP_004666935.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes YP_004666936.1 COG4953 Membrane carboxypeptidase/penicillin-binding protein PbpC YP_004666937.1 COG5337 Spore coat assembly protein YP_004666939.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_004666940.1 COG5276 Uncharacterized conserved protein YP_004666941.1 COG2200 FOG: EAL domain YP_004666945.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_004666946.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_004666947.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_004666948.1 COG1510 Predicted transcriptional regulators YP_004666952.1 COG0457 FOG: TPR repeat YP_004666954.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit YP_004666956.1 COG4669 Type III secretory pathway, lipoprotein EscJ YP_004666959.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein YP_004666960.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase YP_004666963.1 COG1868 Flagellar motor switch protein YP_004666965.1 COG1338 Flagellar biosynthesis pathway, component FliP YP_004666966.1 COG1987 Flagellar biosynthesis pathway, component FliQ YP_004666967.1 COG4791 Type III secretory pathway, component EscT YP_004666968.1 COG1377 Flagellar biosynthesis pathway, component FlhB YP_004666969.1 COG1377 Flagellar biosynthesis pathway, component FlhB YP_004666971.1 COG0457 FOG: TPR repeat YP_004666976.1 COG0457 FOG: TPR repeat YP_004666978.1 COG0457 FOG: TPR repeat YP_004666980.1 COG4789 Type III secretory pathway, component EscV YP_004666981.1 COG1716 FOG: FHA domain YP_004666982.1 COG0457 FOG: TPR repeat YP_004666983.1 COG3047 Outer membrane protein W YP_004666984.1 COG1714 Predicted membrane protein/domain YP_004666985.1 COG1413 FOG: HEAT repeat YP_004666988.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_004666989.1 COG0457 FOG: TPR repeat YP_004666990.1 COG1300 Uncharacterized membrane protein YP_004666991.1 COG0221 Inorganic pyrophosphatase YP_004666992.1 COG0221 Inorganic pyrophosphatase YP_004666993.1 COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) YP_004666994.1 COG0714 MoxR-like ATPases YP_004666998.1 COG1158 Transcription termination factor YP_004667000.1 COG0616 Periplasmic serine proteases (ClpP class) YP_004667003.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit YP_004667004.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit YP_004667006.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_004667010.1 COG3324 Predicted enzyme related to lactoylglutathione lyase YP_004667012.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004667014.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004667015.1 COG1716 FOG: FHA domain YP_004667017.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_004667018.1 COG4972 Tfp pilus assembly protein, ATPase PilM YP_004667020.1 COG4795 Type II secretory pathway, component PulJ YP_004667022.1 COG2132 Putative multicopper oxidases YP_004667023.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_004667024.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_004667026.1 COG1459 Type II secretory pathway, component PulF YP_004667027.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_004667028.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004667029.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004667030.1 COG1475 Predicted transcriptional regulators YP_004667031.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_004667032.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_004667033.1 COG1716 FOG: FHA domain YP_004667034.1 COG0457 FOG: TPR repeat YP_004667036.1 COG0457 FOG: TPR repeat YP_004667037.1 COG2334 Putative homoserine kinase type II (protein kinase fold) YP_004667040.1 COG0457 FOG: TPR repeat YP_004667041.1 COG3215 Tfp pilus assembly protein PilZ YP_004667042.1 COG1430 Uncharacterized conserved protein YP_004667044.1 COG2200 FOG: EAL domain YP_004667046.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_004667047.1 COG2606 Uncharacterized conserved protein YP_004667048.1 COG0026 Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) YP_004667049.1 COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase YP_004667050.1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) YP_004667051.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_004667055.1 COG0457 FOG: TPR repeat YP_004667056.1 COG0477 Permeases of the major facilitator superfamily YP_004667057.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_004667059.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_004667060.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_004667061.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_004667062.1 COG0515 Serine/threonine protein kinase YP_004667063.1 COG0515 Serine/threonine protein kinase YP_004667065.1 COG0457 FOG: TPR repeat YP_004667067.1 COG2378 Predicted transcriptional regulator YP_004667068.1 COG0020 Undecaprenyl pyrophosphate synthase YP_004667069.1 COG0575 CDP-diglyceride synthetase YP_004667070.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_004667071.1 COG0797 Lipoproteins YP_004667072.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone YP_004667073.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_004667076.1 COG3291 FOG: PKD repeat YP_004667077.1 COG1977 Molybdopterin converting factor, small subunit YP_004667079.1 COG0477 Permeases of the major facilitator superfamily YP_004667080.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1 YP_004667081.1 COG1051 ADP-ribose pyrophosphatase YP_004667083.1 COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases YP_004667084.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_004667085.1 COG0406 Fructose-2,6-bisphosphatase YP_004667087.1 COG0164 Ribonuclease HII YP_004667091.1 COG3975 Predicted protease with the C-terminal PDZ domain YP_004667092.1 COG0144 tRNA and rRNA cytosine-C5-methylases YP_004667093.1 COG1409 Predicted phosphohydrolases YP_004667096.1 COG0125 Thymidylate kinase YP_004667100.1 COG0515 Serine/threonine protein kinase YP_004667101.1 COG0607 Rhodanese-related sulfurtransferase YP_004667102.1 COG0607 Rhodanese-related sulfurtransferase YP_004667103.1 COG0316 Uncharacterized conserved protein YP_004667104.1 COG1607 Acyl-CoA hydrolase YP_004667105.1 COG1428 Deoxynucleoside kinases YP_004667106.1 COG0584 Glycerophosphoryl diester phosphodiesterase YP_004667107.1 COG1197 Transcription-repair coupling factor (superfamily II helicase) YP_004667109.1 COG0515 Serine/threonine protein kinase YP_004667114.1 COG0500 SAM-dependent methyltransferases YP_004667116.1 COG0379 Quinolinate synthase YP_004667118.1 COG0500 SAM-dependent methyltransferases YP_004667119.1 COG0642 Signal transduction histidine kinase YP_004667120.1 COG3104 Dipeptide/tripeptide permease YP_004667121.1 COG3104 Dipeptide/tripeptide permease YP_004667122.1 COG0178 Excinuclease ATPase subunit YP_004667124.1 COG2513 PEP phosphonomutase and related enzymes YP_004667125.1 COG0350 Methylated DNA-protein cysteine methyltransferase YP_004667126.1 COG2169 Adenosine deaminase YP_004667128.1 COG0671 Membrane-associated phospholipid phosphatase YP_004667129.1 COG0456 Acetyltransferases YP_004667130.1 COG0183 Acetyl-CoA acetyltransferase YP_004667131.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) YP_004667132.1 COG0104 Adenylosuccinate synthase YP_004667133.1 COG0457 FOG: TPR repeat YP_004667135.1 COG1716 FOG: FHA domain YP_004667136.1 COG3361 Uncharacterized conserved protein YP_004667137.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_004667140.1 COG0658 Predicted membrane metal-binding protein YP_004667141.1 COG1329 Transcriptional regulators, similar to M. xanthus CarD YP_004667143.1 COG1716 FOG: FHA domain YP_004667144.1 COG0215 Cysteinyl-tRNA synthetase YP_004667145.1 COG2234 Predicted aminopeptidases YP_004667146.1 COG0556 Helicase subunit of the DNA excision repair complex YP_004667147.1 COG0322 Nuclease subunit of the excinuclease complex YP_004667148.1 COG2952 Uncharacterized protein conserved in bacteria YP_004667155.1 COG0325 Predicted enzyme with a TIM-barrel fold YP_004667156.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation YP_004667157.1 COG2199 FOG: GGDEF domain YP_004667158.1 COG0760 Parvulin-like peptidyl-prolyl isomerase YP_004667159.1 COG1792 Cell shape-determining protein YP_004667161.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_004667162.1 COG0772 Bacterial cell division membrane protein YP_004667165.1 COG2326 Uncharacterized conserved protein YP_004667166.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004667168.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_004667169.1 COG0373 Glutamyl-tRNA reductase YP_004667170.1 COG0181 Porphobilinogen deaminase YP_004667171.1 COG1587 Uroporphyrinogen-III synthase YP_004667172.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_004667175.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_004667176.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_004667177.1 COG2271 Sugar phosphate permease YP_004667180.1 COG3209 Rhs family protein YP_004667183.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_004667184.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_004667185.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_004667188.1 COG0784 FOG: CheY-like receiver YP_004667190.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004667191.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_004667192.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases YP_004667196.1 COG0560 Phosphoserine phosphatase YP_004667197.1 COG0515 Serine/threonine protein kinase YP_004667198.1 COG0835 Chemotaxis signal transduction protein YP_004667199.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_004667200.1 COG0840 Methyl-accepting chemotaxis protein YP_004667201.1 COG0784 FOG: CheY-like receiver YP_004667202.1 COG0835 Chemotaxis signal transduction protein YP_004667203.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_004667204.1 COG0642 Signal transduction histidine kinase YP_004667206.1 COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase YP_004667207.1 COG0312 Predicted Zn-dependent proteases and their inactivated homologs YP_004667208.1 COG0642 Signal transduction histidine kinase YP_004667210.1 COG1015 Phosphopentomutase YP_004667211.1 COG1846 Transcriptional regulators YP_004667212.1 COG1100 GTPase SAR1 and related small G proteins YP_004667213.1 COG0227 Ribosomal protein L28 YP_004667215.1 COG0637 Predicted phosphatase/phosphohexomutase YP_004667216.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_004667217.1 COG1683 Uncharacterized conserved protein YP_004667218.1 COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN YP_004667219.1 COG0150 Phosphoribosylaminoimidazole (AIR) synthetase YP_004667220.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_004667221.1 COG5212 Low-affinity cAMP phosphodiesterase YP_004667222.1 COG0777 Acetyl-CoA carboxylase beta subunit YP_004667223.1 COG0285 Folylpolyglutamate synthase YP_004667224.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004667225.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_004667226.1 COG0457 FOG: TPR repeat YP_004667228.1 COG1452 Organic solvent tolerance protein OstA YP_004667229.1 COG1396 Predicted transcriptional regulators YP_004667231.1 COG1309 Transcriptional regulator YP_004667232.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_004667233.1 COG0739 Membrane proteins related to metalloendopeptidases YP_004667235.1 COG3568 Metal-dependent hydrolase YP_004667243.1 COG4252 Predicted transmembrane sensor domain YP_004667244.1 COG3411 Ferredoxin YP_004667245.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) YP_004667246.1 COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H) YP_004667247.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G) YP_004667248.1 COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7 YP_004667249.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit YP_004667250.1 COG3119 Arylsulfatase A and related enzymes YP_004667251.1 COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases YP_004667252.1 COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A) YP_004667253.1 COG0840 Methyl-accepting chemotaxis protein YP_004667256.1 COG0515 Serine/threonine protein kinase YP_004667257.1 COG0613 Predicted metal-dependent phosphoesterases (PHP family) YP_004667259.1 COG1899 Deoxyhypusine synthase YP_004667260.1 COG1765 Predicted redox protein, regulator of disulfide bond formation YP_004667261.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_004667263.1 COG2353 Uncharacterized conserved protein YP_004667264.1 COG3425 3-hydroxy-3-methylglutaryl CoA synthase YP_004667265.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_004667267.1 COG0583 Transcriptional regulator YP_004667268.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_004667269.1 COG1960 Acyl-CoA dehydrogenases YP_004667270.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_004667271.1 COG0367 Asparagine synthase (glutamine-hydrolyzing) YP_004667273.1 COG1166 Arginine decarboxylase (spermidine biosynthesis) YP_004667274.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_004667275.1 COG1286 Uncharacterized membrane protein, required for colicin V production YP_004667276.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_004667277.1 COG0443 Molecular chaperone YP_004667278.1 COG0121 Predicted glutamine amidotransferase YP_004667280.1 COG0642 Signal transduction histidine kinase YP_004667282.1 COG5470 Uncharacterized conserved protein YP_004667283.1 COG3227 Zinc metalloprotease (elastase) YP_004667284.1 COG1266 Predicted metal-dependent membrane protease YP_004667286.1 COG1796 DNA polymerase IV (family X) YP_004667287.1 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases YP_004667288.1 COG0521 Molybdopterin biosynthesis enzymes YP_004667289.1 COG2234 Predicted aminopeptidases YP_004667290.1 COG1610 Uncharacterized conserved protein YP_004667291.1 COG0177 Predicted EndoIII-related endonuclease YP_004667292.1 COG0642 Signal transduction histidine kinase YP_004667293.1 COG0657 Esterase/lipase YP_004667294.1 COG1233 Phytoene dehydrogenase and related proteins YP_004667295.1 COG0457 FOG: TPR repeat YP_004667297.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004667298.1 COG0642 Signal transduction histidine kinase YP_004667299.1 COG0031 Cysteine synthase YP_004667302.1 COG0642 Signal transduction histidine kinase YP_004667303.1 COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins YP_004667304.1 COG3508 Homogentisate 1,2-dioxygenase YP_004667305.1 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases YP_004667306.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004667307.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_004667310.1 COG1309 Transcriptional regulator YP_004667311.1 COG0178 Excinuclease ATPase subunit YP_004667315.1 COG0223 Methionyl-tRNA formyltransferase YP_004667316.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004667317.1 COG3321 Polyketide synthase modules and related proteins YP_004667318.1 COG0668 Small-conductance mechanosensitive channel YP_004667319.1 COG0470 ATPase involved in DNA replication YP_004667320.1 COG1466 DNA polymerase III, delta subunit YP_004667321.1 COG0500 SAM-dependent methyltransferases YP_004667322.1 COG3332 Uncharacterized conserved protein YP_004667323.1 COG0143 Methionyl-tRNA synthetase YP_004667324.1 COG1413 FOG: HEAT repeat YP_004667325.1 COG0084 Mg-dependent DNase YP_004667326.1 COG2206 HD-GYP domain YP_004667327.1 COG3481 Predicted HD-superfamily hydrolase YP_004667328.1 COG1092 Predicted SAM-dependent methyltransferases YP_004667330.1 COG2509 Uncharacterized FAD-dependent dehydrogenases YP_004667332.1 COG0818 Diacylglycerol kinase YP_004667333.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_004667334.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase YP_004667335.1 COG0126 3-phosphoglycerate kinase YP_004667336.1 COG0149 Triosephosphate isomerase YP_004667338.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_004667339.1 COG0586 Uncharacterized membrane-associated protein YP_004667341.1 COG1484 DNA replication protein YP_004667342.1 COG4584 Transposase and inactivated derivatives YP_004667344.1 COG1396 Predicted transcriptional regulators YP_004667346.1 COG3000 Sterol desaturase YP_004667348.1 COG1414 Transcriptional regulator YP_004667350.1 COG1484 DNA replication protein YP_004667351.1 COG4584 Transposase and inactivated derivatives YP_004667353.1 COG0515 Serine/threonine protein kinase YP_004667359.1 COG2801 Transposase and inactivated derivatives YP_004667363.1 COG3000 Sterol desaturase YP_004667366.1 COG0500 SAM-dependent methyltransferases YP_004667367.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004667369.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_004667370.1 COG0515 Serine/threonine protein kinase YP_004667371.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_004667372.1 COG0583 Transcriptional regulator YP_004667373.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_004667374.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_004667375.1 COG0366 Glycosidases YP_004667376.1 COG1739 Uncharacterized conserved protein YP_004667377.1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase YP_004667384.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_004667385.1 COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_004667388.1 COG4403 Lantibiotic modifying enzyme YP_004667389.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_004667390.1 COG4805 Uncharacterized protein conserved in bacteria YP_004667391.1 COG3191 L-aminopeptidase/D-esterase YP_004667397.1 COG0628 Predicted permease YP_004667400.1 COG2193 Bacterioferritin (cytochrome b1) YP_004667401.1 COG1070 Sugar (pentulose and hexulose) kinases YP_004667402.1 COG0076 Glutamate decarboxylase and related PLP-dependent proteins YP_004667404.1 COG2801 Transposase and inactivated derivatives YP_004667405.1 COG0457 FOG: TPR repeat YP_004667407.1 COG3328 Transposase and inactivated derivatives YP_004667408.1 COG1454 Alcohol dehydrogenase, class IV YP_004667409.1 COG1359 Uncharacterized conserved protein YP_004667411.1 COG3899 Predicted ATPase YP_004667412.1 COG1611 Predicted Rossmann fold nucleotide-binding protein YP_004667413.1 COG1011 Predicted hydrolase (HAD superfamily) YP_004667414.1 COG3119 Arylsulfatase A and related enzymes YP_004667415.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_004667416.1 COG0731 Fe-S oxidoreductases YP_004667418.1 COG3831 Uncharacterized conserved protein YP_004667420.1 COG0714 MoxR-like ATPases YP_004667423.1 COG0464 ATPases of the AAA+ class YP_004667426.1 COG0602 Organic radical activating enzymes YP_004667427.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004667429.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_004667431.1 COG1183 Phosphatidylserine synthase YP_004667434.1 COG0515 Serine/threonine protein kinase YP_004667435.1 COG0515 Serine/threonine protein kinase YP_004667436.1 COG0789 Predicted transcriptional regulators YP_004667437.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_004667438.1 COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) YP_004667439.1 COG0457 FOG: TPR repeat YP_004667440.1 COG0151 Phosphoribosylamine-glycine ligase YP_004667441.1 COG0795 Predicted permeases YP_004667442.1 COG0795 Predicted permeases YP_004667444.1 COG0438 Glycosyltransferase YP_004667445.1 COG0438 Glycosyltransferase YP_004667446.1 COG2148 Sugar transferases involved in lipopolysaccharide synthesis YP_004667447.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004667452.1 COG0209 Ribonucleotide reductase, alpha subunit YP_004667453.1 COG3411 Ferredoxin YP_004667454.1 COG3325 Chitinase YP_004667456.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004667457.1 COG0457 FOG: TPR repeat YP_004667465.1 COG0457 FOG: TPR repeat YP_004667466.1 COG1335 Amidases related to nicotinamidase YP_004667467.1 COG1108 ABC-type Mn2+/Zn2+ transport systems, permease components YP_004667468.1 COG1121 ABC-type Mn/Zn transport systems, ATPase component YP_004667470.1 COG0803 ABC-type metal ion transport system, periplasmic component/surface adhesin YP_004667473.1 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases YP_004667474.1 COG0302 GTP cyclohydrolase I YP_004667475.1 COG0277 FAD/FMN-containing dehydrogenases YP_004667476.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_004667477.1 COG0457 FOG: TPR repeat YP_004667478.1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) YP_004667479.1 COG1826 Sec-independent protein secretion pathway components YP_004667480.1 COG0642 Signal transduction histidine kinase YP_004667481.1 COG0784 FOG: CheY-like receiver YP_004667482.1 COG3255 Putative sterol carrier protein YP_004667483.1 COG1804 Predicted acyl-CoA transferases/carnitine dehydratase YP_004667485.1 COG1846 Transcriptional regulators YP_004667486.1 COG0841 Cation/multidrug efflux pump YP_004667487.1 COG0845 Membrane-fusion protein YP_004667488.1 COG1960 Acyl-CoA dehydrogenases YP_004667489.1 COG1301 Na+/H+-dicarboxylate symporters YP_004667492.1 COG0293 23S rRNA methylase YP_004667493.1 COG2373 Large extracellular alpha-helical protein YP_004667495.1 COG0162 Tyrosyl-tRNA synthetase YP_004667496.1 COG1692 Uncharacterized protein conserved in bacteria YP_004667497.1 COG0212 5-formyltetrahydrofolate cyclo-ligase YP_004667498.1 COG0457 FOG: TPR repeat YP_004667499.1 COG0515 Serine/threonine protein kinase YP_004667501.1 COG0625 Glutathione S-transferase YP_004667502.1 COG0467 RecA-superfamily ATPases implicated in signal transduction YP_004667503.1 COG0642 Signal transduction histidine kinase YP_004667504.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_004667506.1 COG0618 Exopolyphosphatase-related proteins YP_004667507.1 COG1186 Protein chain release factor B YP_004667508.1 COG0606 Predicted ATPase with chaperone activity YP_004667509.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase YP_004667511.1 COG0714 MoxR-like ATPases YP_004667513.1 COG0784 FOG: CheY-like receiver YP_004667514.1 COG0438 Glycosyltransferase YP_004667515.1 COG3330 Uncharacterized protein conserved in bacteria YP_004667516.1 COG1543 Uncharacterized conserved protein YP_004667517.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004667519.1 COG2199 FOG: GGDEF domain YP_004667520.1 COG1496 Uncharacterized conserved protein YP_004667521.1 COG1729 Uncharacterized protein conserved in bacteria YP_004667522.1 COG1652 Uncharacterized protein containing LysM domain YP_004667523.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake YP_004667524.1 COG0550 Topoisomerase IA YP_004667525.1 COG0811 Biopolymer transport proteins YP_004667526.1 COG0848 Biopolymer transport protein YP_004667528.1 COG1734 DnaK suppressor protein YP_004667529.1 COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation YP_004667530.1 COG2319 FOG: WD40 repeat YP_004667532.1 COG4974 Site-specific recombinase XerD YP_004667534.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit YP_004667535.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit YP_004667536.1 COG4992 Ornithine/acetylornithine aminotransferase YP_004667537.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_004667538.1 COG0443 Molecular chaperone YP_004667540.1 COG2030 Acyl dehydratase YP_004667541.1 COG2030 Acyl dehydratase YP_004667542.1 COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes YP_004667543.1 COG0237 Dephospho-CoA kinase YP_004667546.1 COG0218 Predicted GTPase YP_004667548.1 COG3307 Lipid A core - O-antigen ligase and related enzymes YP_004667549.1 COG0438 Glycosyltransferase YP_004667550.1 COG3595 Uncharacterized conserved protein YP_004667551.1 COG0167 Dihydroorotate dehydrogenase YP_004667552.1 COG1816 Adenosine deaminase YP_004667553.1 COG2840 Uncharacterized protein conserved in bacteria YP_004667554.1 COG1076 DnaJ-domain-containing proteins 1 YP_004667555.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase YP_004667556.1 COG0500 SAM-dependent methyltransferases YP_004667557.1 COG1397 ADP-ribosylglycohydrolase YP_004667559.1 COG0642 Signal transduction histidine kinase YP_004667562.1 COG0685 5,10-methylenetetrahydrofolate reductase YP_004667563.1 COG0404 Glycine cleavage system T protein (aminomethyltransferase) YP_004667564.1 COG0509 Glycine cleavage system H protein (lipoate-binding) YP_004667565.1 COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain YP_004667566.1 COG0053 Predicted Co/Zn/Cd cation transporters YP_004667567.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_004667568.1 COG2385 Sporulation protein and related proteins YP_004667571.1 COG1960 Acyl-CoA dehydrogenases YP_004667572.1 COG0607 Rhodanese-related sulfurtransferase YP_004667573.1 COG0136 Aspartate-semialdehyde dehydrogenase YP_004667574.1 COG1146 Ferredoxin YP_004667577.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_004667578.1 COG1643 HrpA-like helicases YP_004667580.1 COG0546 Predicted phosphatases YP_004667581.1 COG1413 FOG: HEAT repeat YP_004667584.1 COG0189 Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) YP_004667586.1 COG0566 rRNA methylases YP_004667587.1 COG0050 GTPases - translation elongation factors YP_004667588.1 COG0267 Ribosomal protein L33 YP_004667590.1 COG0250 Transcription antiterminator YP_004667591.1 COG0080 Ribosomal protein L11 YP_004667592.1 COG0081 Ribosomal protein L1 YP_004667593.1 COG0244 Ribosomal protein L10 YP_004667594.1 COG0222 Ribosomal protein L7/L12 YP_004667595.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_004667596.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_004667599.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_004667602.1 COG0457 FOG: TPR repeat YP_004667603.1 COG1426 Uncharacterized protein conserved in bacteria YP_004667604.1 COG1381 Recombinational DNA repair protein (RecF pathway) YP_004667605.1 COG0524 Sugar kinases, ribokinase family YP_004667606.1 COG3708 Uncharacterized protein conserved in bacteria YP_004667607.1 COG0789 Predicted transcriptional regulators YP_004667608.1 COG1297 Predicted membrane protein YP_004667609.1 COG0515 Serine/threonine protein kinase YP_004667611.1 COG0515 Serine/threonine protein kinase YP_004667612.1 COG1716 FOG: FHA domain YP_004667614.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_004667615.1 COG2202 FOG: PAS/PAC domain YP_004667616.1 COG0515 Serine/threonine protein kinase YP_004667617.1 COG0752 Glycyl-tRNA synthetase, alpha subunit YP_004667618.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_004667621.1 COG1716 FOG: FHA domain YP_004667622.1 COG1716 FOG: FHA domain YP_004667624.1 COG4964 Flp pilus assembly protein, secretin CpaC YP_004667625.1 COG1716 FOG: FHA domain YP_004667626.1 COG1716 FOG: FHA domain YP_004667627.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI) YP_004667630.1 COG3599 Cell division initiation protein YP_004667632.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_004667633.1 COG1300 Uncharacterized membrane protein YP_004667634.1 COG1714 Predicted membrane protein/domain YP_004667635.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_004667636.1 COG3251 Uncharacterized protein conserved in bacteria YP_004667639.1 COG1893 Ketopantoate reductase YP_004667641.1 COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit YP_004667642.1 COG3616 Predicted amino acid aldolase or racemase YP_004667646.1 COG1131 ABC-type multidrug transport system, ATPase component YP_004667648.1 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component YP_004667651.1 COG5483 Uncharacterized conserved protein YP_004667653.1 COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold YP_004667654.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_004667655.1 COG0583 Transcriptional regulator YP_004667658.1 COG1505 Serine proteases of the peptidase family S9A YP_004667659.1 COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) YP_004667664.1 COG0642 Signal transduction histidine kinase YP_004667666.1 COG2133 Glucose/sorbosone dehydrogenases YP_004667667.1 COG0708 Exonuclease III YP_004667669.1 COG4630 Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A YP_004667670.1 COG1975 Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family YP_004667671.1 COG1533 DNA repair photolyase YP_004667674.1 COG2311 Predicted membrane protein YP_004667676.1 COG0177 Predicted EndoIII-related endonuclease YP_004667677.1 COG4188 Predicted dienelactone hydrolase YP_004667678.1 COG1858 Cytochrome c peroxidase YP_004667679.1 COG1858 Cytochrome c peroxidase YP_004667680.1 COG4303 Ethanolamine ammonia-lyase, large subunit YP_004667681.1 COG0447 Dihydroxynaphthoic acid synthase YP_004667683.1 COG1272 Predicted membrane protein, hemolysin III homolog YP_004667686.1 COG0308 Aminopeptidase N YP_004667687.1 COG3590 Predicted metalloendopeptidase YP_004667689.1 COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain YP_004667690.1 COG1360 Flagellar motor protein YP_004667691.1 COG3034 Uncharacterized protein conserved in bacteria YP_004667692.1 COG0784 FOG: CheY-like receiver YP_004667693.1 COG0467 RecA-superfamily ATPases implicated in signal transduction YP_004667694.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004667696.1 COG2866 Predicted carboxypeptidase YP_004667701.1 COG2214 DnaJ-class molecular chaperone YP_004667703.1 COG2354 Uncharacterized protein conserved in bacteria YP_004667704.1 COG2130 Putative NADP-dependent oxidoreductases YP_004667705.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_004667706.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_004667708.1 COG3021 Uncharacterized protein conserved in bacteria YP_004667716.1 COG0782 Transcription elongation factor YP_004667718.1 COG1875 Predicted ATPase related to phosphate starvation-inducible protein PhoH YP_004667719.1 COG2921 Uncharacterized conserved protein YP_004667720.1 COG0500 SAM-dependent methyltransferases YP_004667722.1 COG0443 Molecular chaperone YP_004667724.1 COG3011 Uncharacterized protein conserved in bacteria YP_004667725.1 COG0714 MoxR-like ATPases YP_004667726.1 COG2425 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_004667728.1 COG1624 Uncharacterized conserved protein YP_004667729.1 COG1734 DnaK suppressor protein YP_004667730.1 COG1716 FOG: FHA domain YP_004667731.1 COG0515 Serine/threonine protein kinase YP_004667732.1 COG1716 FOG: FHA domain YP_004667733.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases YP_004667734.1 COG0251 Putative translation initiation inhibitor, yjgF family YP_004667735.1 COG1651 Protein-disulfide isomerase YP_004667736.1 COG0425 Predicted redox protein, regulator of disulfide bond formation YP_004667737.1 COG1131 ABC-type multidrug transport system, ATPase component YP_004667738.1 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component YP_004667739.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_004667741.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004667742.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_004667743.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004667744.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_004667746.1 COG4249 Uncharacterized protein containing caspase domain YP_004667747.1 COG0457 FOG: TPR repeat YP_004667748.1 COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_004667749.1 COG0077 Prephenate dehydratase YP_004667750.1 COG1605 Chorismate mutase YP_004667751.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_004667752.1 COG2947 Uncharacterized conserved protein YP_004667754.1 COG1596 Periplasmic protein involved in polysaccharide export YP_004667756.1 COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis YP_004667757.1 COG0489 ATPases involved in chromosome partitioning YP_004667758.1 COG2148 Sugar transferases involved in lipopolysaccharide synthesis YP_004667759.1 COG0391 Uncharacterized conserved protein YP_004667761.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis YP_004667763.1 COG0457 FOG: TPR repeat YP_004667764.1 COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes YP_004667765.1 COG3173 Predicted aminoglycoside phosphotransferase YP_004667766.1 COG1835 Predicted acyltransferases YP_004667767.1 COG3751 Predicted proline hydroxylase YP_004667768.1 COG1846 Transcriptional regulators YP_004667769.1 COG5507 Uncharacterized conserved protein YP_004667771.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_004667773.1 COG4403 Lantibiotic modifying enzyme YP_004667774.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_004667775.1 COG0277 FAD/FMN-containing dehydrogenases YP_004667778.1 COG3409 Putative peptidoglycan-binding domain-containing protein YP_004667779.1 COG3386 Gluconolactonase YP_004667781.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004667782.1 COG1138 Cytochrome c biogenesis factor YP_004667783.1 COG2332 Cytochrome c-type biogenesis protein CcmE YP_004667785.1 COG0755 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_004667786.1 COG2386 ABC-type transport system involved in cytochrome c biogenesis, permease component YP_004667787.1 COG1131 ABC-type multidrug transport system, ATPase component YP_004667788.1 COG0726 Predicted xylanase/chitin deacetylase YP_004667789.1 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid YP_004667790.1 COG1045 Serine acetyltransferase YP_004667791.1 COG0438 Glycosyltransferase YP_004667792.1 COG0438 Glycosyltransferase YP_004667796.1 COG0352 Thiamine monophosphate synthase YP_004667797.1 COG2022 Uncharacterized enzyme of thiazole biosynthesis YP_004667798.1 COG2104 Sulfur transfer protein involved in thiamine biosynthesis YP_004667801.1 COG0515 Serine/threonine protein kinase YP_004667802.1 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog YP_004667805.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_004667806.1 COG2128 Uncharacterized conserved protein YP_004667807.1 COG2128 Uncharacterized conserved protein YP_004667808.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004667809.1 COG0598 Mg2+ and Co2+ transporters YP_004667811.1 COG0561 Predicted hydrolases of the HAD superfamily YP_004667812.1 COG1092 Predicted SAM-dependent methyltransferases YP_004667814.1 COG2945 Predicted hydrolase of the alpha/beta superfamily YP_004667815.1 COG1404 Subtilisin-like serine proteases YP_004667817.1 COG1266 Predicted metal-dependent membrane protease YP_004667818.1 COG2937 Glycerol-3-phosphate O-acyltransferase YP_004667819.1 COG0018 Arginyl-tRNA synthetase YP_004667820.1 COG0642 Signal transduction histidine kinase YP_004667821.1 COG1413 FOG: HEAT repeat YP_004667822.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain YP_004667824.1 COG0456 Acetyltransferases YP_004667825.1 COG0048 Ribosomal protein S12 YP_004667826.1 COG0049 Ribosomal protein S7 YP_004667827.1 COG0480 Translation elongation factors (GTPases) YP_004667828.1 COG0050 GTPases - translation elongation factors YP_004667829.1 COG0051 Ribosomal protein S10 YP_004667830.1 COG0088 Ribosomal protein L4 YP_004667831.1 COG0089 Ribosomal protein L23 YP_004667832.1 COG0090 Ribosomal protein L2 YP_004667833.1 COG0185 Ribosomal protein S19 YP_004667834.1 COG0091 Ribosomal protein L22 YP_004667835.1 COG0092 Ribosomal protein S3 YP_004667836.1 COG0197 Ribosomal protein L16/L10E YP_004667837.1 COG0255 Ribosomal protein L29 YP_004667838.1 COG0186 Ribosomal protein S17 YP_004667839.1 COG0093 Ribosomal protein L14 YP_004667840.1 COG0198 Ribosomal protein L24 YP_004667841.1 COG0094 Ribosomal protein L5 YP_004667842.1 COG0199 Ribosomal protein S14 YP_004667843.1 COG0096 Ribosomal protein S8 YP_004667844.1 COG0097 Ribosomal protein L6P/L9E YP_004667845.1 COG0256 Ribosomal protein L18 YP_004667846.1 COG0098 Ribosomal protein S5 YP_004667847.1 COG1841 Ribosomal protein L30/L7E YP_004667848.1 COG0200 Ribosomal protein L15 YP_004667849.1 COG0201 Preprotein translocase subunit SecY YP_004667850.1 COG0563 Adenylate kinase and related kinases YP_004667851.1 COG0361 Translation initiation factor 1 (IF-1) YP_004667852.1 COG0257 Ribosomal protein L36 YP_004667853.1 COG0099 Ribosomal protein S13 YP_004667854.1 COG0100 Ribosomal protein S11 YP_004667855.1 COG0522 Ribosomal protein S4 and related proteins YP_004667856.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit YP_004667857.1 COG0203 Ribosomal protein L17 YP_004667859.1 COG0457 FOG: TPR repeat YP_004667860.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_004667861.1 COG1428 Deoxynucleoside kinases YP_004667863.1 COG1716 FOG: FHA domain YP_004667864.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_004667865.1 COG2313 Uncharacterized enzyme involved in pigment biosynthesis YP_004667866.1 COG1956 GAF domain-containing protein YP_004667867.1 COG0846 NAD-dependent protein deacetylases, SIR2 family YP_004667868.1 COG0515 Serine/threonine protein kinase YP_004667869.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_004667870.1 COG3809 Uncharacterized protein conserved in bacteria YP_004667871.1 COG3852 Signal transduction histidine kinase, nitrogen specific YP_004667872.1 COG1729 Uncharacterized protein conserved in bacteria YP_004667873.1 COG1278 Cold shock proteins YP_004667874.1 COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase] YP_004667875.1 COG1403 Restriction endonuclease YP_004667876.1 COG0455 ATPases involved in chromosome partitioning YP_004667877.1 COG2214 DnaJ-class molecular chaperone YP_004667879.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_004667880.1 COG2206 HD-GYP domain YP_004667883.1 COG1297 Predicted membrane protein YP_004667884.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_004667885.1 COG1305 Transglutaminase-like enzymes, putative cysteine proteases YP_004667886.1 COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) YP_004667887.1 COG0714 MoxR-like ATPases YP_004667888.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_004667889.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_004667895.1 COG0087 Ribosomal protein L3 YP_004667897.1 COG0107 Imidazoleglycerol-phosphate synthase YP_004667899.1 COG0457 FOG: TPR repeat YP_004667900.1 COG0457 FOG: TPR repeat YP_004667902.1 COG1131 ABC-type multidrug transport system, ATPase component YP_004667906.1 COG1217 Predicted membrane GTPase involved in stress response YP_004667907.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004667908.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004667910.1 COG1230 Co/Zn/Cd efflux system component YP_004667912.1 COG0742 N6-adenine-specific methylase YP_004667913.1 COG0669 Phosphopantetheine adenylyltransferase YP_004667914.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_004667916.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ) YP_004667917.1 COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family YP_004667918.1 COG3239 Fatty acid desaturase YP_004667919.1 COG3832 Uncharacterized conserved protein YP_004667922.1 COG0242 N-formylmethionyl-tRNA deformylase YP_004667923.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_004667924.1 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III YP_004667925.1 COG4623 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein YP_004667926.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_004667931.1 COG1876 D-alanyl-D-alanine carboxypeptidase YP_004667932.1 COG3695 Predicted methylated DNA-protein cysteine methyltransferase YP_004667933.1 COG1716 FOG: FHA domain YP_004667934.1 COG0782 Transcription elongation factor YP_004667935.1 COG1200 RecG-like helicase YP_004667936.1 COG2518 Protein-L-isoaspartate carboxylmethyltransferase YP_004667938.1 COG0498 Threonine synthase YP_004667939.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_004667941.1 COG0125 Thymidylate kinase YP_004667942.1 COG3059 Predicted membrane protein YP_004667944.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_004667945.1 COG0607 Rhodanese-related sulfurtransferase YP_004667946.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_004667947.1 COG2855 Predicted membrane protein YP_004667948.1 COG1416 Uncharacterized conserved protein YP_004667950.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004667951.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004667955.1 COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold YP_004667957.1 COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA YP_004667958.1 COG0457 FOG: TPR repeat YP_004667959.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004667960.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004667961.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_004667962.1 COG3590 Predicted metalloendopeptidase YP_004667964.1 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit YP_004667965.1 COG1309 Transcriptional regulator YP_004667967.1 COG0477 Permeases of the major facilitator superfamily YP_004667969.1 COG4645 Uncharacterized protein conserved in bacteria YP_004667971.1 COG0845 Membrane-fusion protein YP_004667972.1 COG3696 Putative silver efflux pump YP_004667973.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004667974.1 COG0642 Signal transduction histidine kinase YP_004667975.1 COG0178 Excinuclease ATPase subunit YP_004667976.1 COG0840 Methyl-accepting chemotaxis protein YP_004667977.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_004667978.1 COG0296 1,4-alpha-glucan branching enzyme YP_004667979.1 COG3791 Uncharacterized conserved protein YP_004667980.1 COG0673 Predicted dehydrogenases and related proteins YP_004667981.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004667982.1 COG0824 Predicted thioesterase YP_004667983.1 COG3239 Fatty acid desaturase YP_004667984.1 COG0500 SAM-dependent methyltransferases YP_004667985.1 COG2986 Histidine ammonia-lyase YP_004667986.1 COG0527 Aspartokinases YP_004667987.1 COG1555 DNA uptake protein and related DNA-binding proteins YP_004667991.1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis YP_004667992.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_004667994.1 COG0210 Superfamily I DNA and RNA helicases YP_004667995.1 COG0443 Molecular chaperone YP_004667996.1 COG3255 Putative sterol carrier protein YP_004667998.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance YP_004668000.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_004668001.1 COG0439 Biotin carboxylase YP_004668004.1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis YP_004668005.1 COG2091 Phosphopantetheinyl transferase YP_004668006.1 COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis YP_004668007.1 COG0529 Adenylylsulfate kinase and related kinases YP_004668008.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_004668011.1 COG0582 Integrase YP_004668012.1 COG1910 Periplasmic molybdate-binding protein/domain YP_004668020.1 COG5437 Predicted secreted protein YP_004668028.1 COG4695 Phage-related protein YP_004668036.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) YP_004668040.1 COG1200 RecG-like helicase YP_004668041.1 COG0270 Site-specific DNA methylase YP_004668053.1 COG2890 Methylase of polypeptide chain release factors YP_004668057.1 COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase YP_004668060.1 COG3239 Fatty acid desaturase YP_004668063.1 COG3629 DNA-binding transcriptional activator of the SARP family YP_004668064.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_004668065.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_004668067.1 COG0776 Bacterial nucleoid DNA-binding protein YP_004668068.1 COG3087 Cell division protein YP_004668069.1 COG0662 Mannose-6-phosphate isomerase YP_004668072.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_004668073.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_004668074.1 COG0481 Membrane GTPase LepA YP_004668075.1 COG0681 Signal peptidase I YP_004668076.1 COG0540 Aspartate carbamoyltransferase, catalytic chain YP_004668077.1 COG0044 Dihydroorotase and related cyclic amidohydrolases YP_004668078.1 COG0505 Carbamoylphosphate synthase small subunit YP_004668080.1 COG0469 Pyruvate kinase YP_004668081.1 COG1259 Uncharacterized conserved protein YP_004668083.1 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) YP_004668084.1 COG0372 Citrate synthase YP_004668085.1 COG0128 5-enolpyruvylshikimate-3-phosphate synthase YP_004668086.1 COG0337 3-dehydroquinate synthetase YP_004668087.1 COG0082 Chorismate synthase YP_004668088.1 COG0169 Shikimate 5-dehydrogenase YP_004668089.1 COG0703 Shikimate kinase YP_004668090.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis YP_004668091.1 COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_004668092.1 COG1169 Isochorismate synthase YP_004668093.1 COG1165 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase YP_004668094.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004668095.1 COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_004668096.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_004668097.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_004668099.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_004668104.1 COG0642 Signal transduction histidine kinase YP_004668105.1 COG0538 Isocitrate dehydrogenases YP_004668106.1 COG0039 Malate/lactate dehydrogenases YP_004668107.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit YP_004668108.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit YP_004668109.1 COG0045 Succinyl-CoA synthetase, beta subunit YP_004668110.1 COG0074 Succinyl-CoA synthetase, alpha subunit YP_004668111.1 COG0105 Nucleoside diphosphate kinase YP_004668112.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_004668113.1 COG0228 Ribosomal protein S16 YP_004668114.1 COG1837 Predicted RNA-binding protein (contains KH domain) YP_004668115.1 COG0806 RimM protein, required for 16S rRNA processing YP_004668116.1 COG0336 tRNA-(guanine-N1)-methyltransferase YP_004668117.1 COG0335 Ribosomal protein L19 YP_004668118.1 COG4717 Uncharacterized conserved protein YP_004668119.1 COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase YP_004668120.1 COG0313 Predicted methyltransferases YP_004668122.1 COG0739 Membrane proteins related to metalloendopeptidases YP_004668123.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004668124.1 COG1659 Uncharacterized protein, linocin/CFP29 homolog YP_004668125.1 COG1633 Uncharacterized conserved protein YP_004668126.1 COG0728 Uncharacterized membrane protein, putative virulence factor YP_004668127.1 COG0539 Ribosomal protein S1 YP_004668128.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_004668129.1 COG2234 Predicted aminopeptidases YP_004668130.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_004668133.1 COG0500 SAM-dependent methyltransferases YP_004668134.1 COG3569 Topoisomerase IB YP_004668136.1 COG2268 Uncharacterized protein conserved in bacteria YP_004668137.1 COG1222 ATP-dependent 26S proteasome regulatory subunit YP_004668138.1 COG4305 Endoglucanase C-terminal domain/subunit and related proteins YP_004668139.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_004668140.1 COG0346 Lactoylglutathione lyase and related lyases YP_004668142.1 COG1409 Predicted phosphohydrolases YP_004668143.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004668149.1 COG1278 Cold shock proteins YP_004668151.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_004668152.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_004668154.1 COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria) YP_004668155.1 COG0628 Predicted permease YP_004668156.1 COG1573 Uracil-DNA glycosylase YP_004668157.1 COG0441 Threonyl-tRNA synthetase YP_004668158.1 COG0291 Ribosomal protein L35 YP_004668159.1 COG0292 Ribosomal protein L20 YP_004668160.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit YP_004668161.1 COG0073 EMAP domain YP_004668162.1 COG0776 Bacterial nucleoid DNA-binding protein YP_004668163.1 COG1715 Restriction endonuclease YP_004668165.1 COG2801 Transposase and inactivated derivatives YP_004668166.1 COG4584 Transposase and inactivated derivatives YP_004668167.1 COG1484 DNA replication protein YP_004668170.1 COG2963 Transposase and inactivated derivatives YP_004668171.1 COG2801 Transposase and inactivated derivatives YP_004668172.1 COG4584 Transposase and inactivated derivatives YP_004668173.1 COG1484 DNA replication protein YP_004668176.1 COG2801 Transposase and inactivated derivatives YP_004668177.1 COG1484 DNA replication protein YP_004668180.1 COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster YP_004668181.1 COG3415 Transposase and inactivated derivatives YP_004668182.1 COG0561 Predicted hydrolases of the HAD superfamily YP_004668183.1 COG3415 Transposase and inactivated derivatives YP_004668184.1 COG3335 Transposase and inactivated derivatives YP_004668187.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_004668188.1 COG0392 Predicted integral membrane protein YP_004668189.1 COG0474 Cation transport ATPase YP_004668190.1 COG0398 Uncharacterized conserved protein YP_004668193.1 COG2202 FOG: PAS/PAC domain YP_004668194.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668195.1 COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) YP_004668196.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668197.1 COG3321 Polyketide synthase modules and related proteins YP_004668198.1 COG3321 Polyketide synthase modules and related proteins YP_004668199.1 COG3321 Polyketide synthase modules and related proteins YP_004668200.1 COG3146 Uncharacterized protein conserved in bacteria YP_004668201.1 COG0625 Glutathione S-transferase YP_004668204.1 COG2850 Uncharacterized conserved protein YP_004668206.1 COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis YP_004668207.1 COG0438 Glycosyltransferase YP_004668208.1 COG3321 Polyketide synthase modules and related proteins YP_004668209.1 COG3321 Polyketide synthase modules and related proteins YP_004668210.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_004668212.1 COG4615 ABC-type siderophore export system, fused ATPase and permease components YP_004668213.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668214.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668215.1 COG3321 Polyketide synthase modules and related proteins YP_004668216.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668217.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668218.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668219.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668220.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668221.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668222.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668223.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668224.1 COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog YP_004668225.1 COG2375 Siderophore-interacting protein YP_004668228.1 COG0001 Glutamate-1-semialdehyde aminotransferase YP_004668229.1 COG2814 Arabinose efflux permease YP_004668230.1 COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase YP_004668231.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668232.1 COG1535 Isochorismate hydrolase YP_004668233.1 COG1021 Peptide arylation enzymes YP_004668234.1 COG1169 Isochorismate synthase YP_004668235.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004668236.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_004668242.1 COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins YP_004668243.1 COG5184 Alpha-tubulin suppressor and related RCC1 domain-containing proteins YP_004668245.1 COG0515 Serine/threonine protein kinase YP_004668249.1 COG0625 Glutathione S-transferase YP_004668250.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_004668251.1 COG2301 Citrate lyase beta subunit YP_004668252.1 COG2030 Acyl dehydratase YP_004668253.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_004668254.1 COG1262 Uncharacterized conserved protein YP_004668258.1 COG2076 Membrane transporters of cations and cationic drugs YP_004668259.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_004668261.1 COG0840 Methyl-accepting chemotaxis protein YP_004668262.1 COG1335 Amidases related to nicotinamidase YP_004668263.1 COG5552 Uncharacterized conserved protein YP_004668264.1 COG3696 Putative silver efflux pump YP_004668265.1 COG0845 Membrane-fusion protein YP_004668266.1 COG1538 Outer membrane protein YP_004668268.1 COG3696 Putative silver efflux pump YP_004668269.1 COG0845 Membrane-fusion protein YP_004668272.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004668275.1 COG0477 Permeases of the major facilitator superfamily YP_004668276.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_004668277.1 COG1510 Predicted transcriptional regulators YP_004668281.1 COG0296 1,4-alpha-glucan branching enzyme YP_004668282.1 COG3281 Uncharacterized protein, probably involved in trehalose biosynthesis YP_004668283.1 COG0366 Glycosidases YP_004668284.1 COG0366 Glycosidases YP_004668285.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004668286.1 COG3485 Protocatechuate 3,4-dioxygenase beta subunit YP_004668287.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004668288.1 COG0642 Signal transduction histidine kinase YP_004668290.1 COG1195 Recombinational DNA repair ATPase (RecF pathway) YP_004668291.1 COG1357 Uncharacterized low-complexity proteins YP_004668296.1 COG1716 FOG: FHA domain YP_004668297.1 COG0515 Serine/threonine protein kinase YP_004668298.1 COG0457 FOG: TPR repeat YP_004668299.1 COG0366 Glycosidases YP_004668302.1 COG0613 Predicted metal-dependent phosphoesterases (PHP family) YP_004668304.1 COG2331 Uncharacterized protein conserved in bacteria YP_004668306.1 COG0735 Fe2+/Zn2+ uptake regulation proteins YP_004668307.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004668308.1 COG2919 Septum formation initiator YP_004668309.1 COG2199 FOG: GGDEF domain YP_004668310.1 COG3488 Predicted thiol oxidoreductase YP_004668311.1 COG0500 SAM-dependent methyltransferases YP_004668312.1 COG4636 Uncharacterized protein conserved in cyanobacteria YP_004668313.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit YP_004668314.1 COG0515 Serine/threonine protein kinase YP_004668315.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_004668316.1 COG0612 Predicted Zn-dependent peptidases YP_004668317.1 COG0612 Predicted Zn-dependent peptidases YP_004668318.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_004668322.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_004668323.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component YP_004668324.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_004668325.1 COG0524 Sugar kinases, ribokinase family YP_004668327.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_004668329.1 COG0688 Phosphatidylserine decarboxylase YP_004668330.1 COG0124 Histidyl-tRNA synthetase YP_004668334.1 COG1520 FOG: WD40-like repeat YP_004668336.1 COG3839 ABC-type sugar transport systems, ATPase components YP_004668337.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase YP_004668338.1 COG3247 Uncharacterized conserved protein YP_004668339.1 COG3781 Predicted membrane protein YP_004668340.1 COG0784 FOG: CheY-like receiver YP_004668341.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_004668342.1 COG0457 FOG: TPR repeat YP_004668343.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004668345.1 COG1830 DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes YP_004668346.1 COG1538 Outer membrane protein YP_004668347.1 COG2854 ABC-type transport system involved in resistance to organic solvents, auxiliary component YP_004668348.1 COG1087 UDP-glucose 4-epimerase YP_004668350.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes YP_004668351.1 COG1033 Predicted exporters of the RND superfamily YP_004668353.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase YP_004668354.1 COG0500 SAM-dependent methyltransferases YP_004668355.1 COG0119 Isopropylmalate/homocitrate/citramalate synthases YP_004668356.1 COG4395 Uncharacterized protein conserved in bacteria YP_004668357.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_004668359.1 COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) YP_004668360.1 COG1960 Acyl-CoA dehydrogenases YP_004668362.1 COG0571 dsRNA-specific ribonuclease YP_004668364.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family YP_004668365.1 COG1159 GTPase YP_004668366.1 COG1160 Predicted GTPases YP_004668367.1 COG0457 FOG: TPR repeat YP_004668368.1 COG1520 FOG: WD40-like repeat YP_004668369.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_004668370.1 COG3359 Predicted exonuclease YP_004668373.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004668374.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_004668376.1 COG0516 IMP dehydrogenase/GMP reductase YP_004668377.1 COG0443 Molecular chaperone YP_004668378.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668379.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668380.1 COG3321 Polyketide synthase modules and related proteins YP_004668381.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_004668382.1 COG3367 Uncharacterized conserved protein YP_004668383.1 COG0586 Uncharacterized membrane-associated protein YP_004668384.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_004668385.1 COG0663 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily YP_004668386.1 COG0621 2-methylthioadenine synthetase YP_004668388.1 COG1479 Uncharacterized conserved protein YP_004668389.1 COG4938 Uncharacterized conserved protein YP_004668391.1 COG3825 Uncharacterized protein conserved in bacteria YP_004668392.1 COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase YP_004668393.1 COG3215 Tfp pilus assembly protein PilZ YP_004668394.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_004668395.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_004668396.1 COG0183 Acetyl-CoA acetyltransferase YP_004668397.1 COG2319 FOG: WD40 repeat YP_004668398.1 COG0539 Ribosomal protein S1 YP_004668399.1 COG1960 Acyl-CoA dehydrogenases YP_004668400.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_004668401.1 COG1960 Acyl-CoA dehydrogenases YP_004668403.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_004668404.1 COG1250 3-hydroxyacyl-CoA dehydrogenase YP_004668407.1 COG0489 ATPases involved in chromosome partitioning YP_004668410.1 COG3528 Uncharacterized protein conserved in bacteria YP_004668411.1 COG0616 Periplasmic serine proteases (ClpP class) YP_004668413.1 COG0430 RNA 3'-terminal phosphate cyclase YP_004668414.1 COG2936 Predicted acyl esterases YP_004668416.1 COG4430 Uncharacterized protein conserved in bacteria YP_004668418.1 COG0477 Permeases of the major facilitator superfamily YP_004668419.1 COG0385 Predicted Na+-dependent transporter YP_004668422.1 COG1914 Mn2+ and Fe2+ transporters of the NRAMP family YP_004668423.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004668424.1 COG2303 Choline dehydrogenase and related flavoproteins YP_004668425.1 COG2303 Choline dehydrogenase and related flavoproteins YP_004668426.1 COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system YP_004668427.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_004668428.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_004668430.1 COG1946 Acyl-CoA thioesterase YP_004668431.1 COG0385 Predicted Na+-dependent transporter YP_004668433.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2 YP_004668434.1 COG3359 Predicted exonuclease YP_004668435.1 COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster YP_004668436.1 COG1055 Na+/H+ antiporter NhaD and related arsenite permeases YP_004668438.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_004668439.1 COG0457 FOG: TPR repeat YP_004668440.1 COG1413 FOG: HEAT repeat YP_004668441.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases YP_004668442.1 COG1386 Predicted transcriptional regulator containing the HTH domain YP_004668443.1 COG1354 Uncharacterized conserved protein YP_004668444.1 COG0180 Tryptophanyl-tRNA synthetase YP_004668446.1 COG4974 Site-specific recombinase XerD YP_004668448.1 COG0009 Putative translation factor (SUA5) YP_004668449.1 COG0475 Kef-type K+ transport systems, membrane components YP_004668452.1 COG3729 General stress protein YP_004668453.1 COG0398 Uncharacterized conserved protein YP_004668454.1 COG1752 Predicted esterase of the alpha-beta hydrolase superfamily YP_004668456.1 COG0671 Membrane-associated phospholipid phosphatase YP_004668457.1 COG3239 Fatty acid desaturase YP_004668458.1 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit YP_004668459.1 COG1106 Predicted ATPases YP_004668460.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_004668461.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_004668462.1 COG0437 Fe-S-cluster-containing hydrogenase components 1 YP_004668464.1 COG0642 Signal transduction histidine kinase YP_004668465.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit YP_004668466.1 COG2111 Multisubunit Na+/H+ antiporter, MnhB subunit YP_004668467.1 COG1006 Multisubunit Na+/H+ antiporter, MnhC subunit YP_004668468.1 COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit YP_004668469.1 COG1863 Multisubunit Na+/H+ antiporter, MnhE subunit YP_004668470.1 COG2212 Multisubunit Na+/H+ antiporter, MnhF subunit YP_004668474.1 COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3 YP_004668475.1 COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1 YP_004668476.1 COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2 YP_004668479.1 COG2010 Cytochrome c, mono- and diheme variants YP_004668481.1 COG5557 Polysulphide reductase YP_004668482.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_004668484.1 COG1301 Na+/H+-dicarboxylate symporters YP_004668485.1 COG3491 Isopenicillin N synthase and related dioxygenases YP_004668486.1 COG2202 FOG: PAS/PAC domain YP_004668487.1 COG0477 Permeases of the major facilitator superfamily YP_004668488.1 COG1038 Pyruvate carboxylase YP_004668489.1 COG5430 Uncharacterized secreted protein YP_004668490.1 COG3188 P pilus assembly protein, porin PapC YP_004668491.1 COG3121 P pilus assembly protein, chaperone PapD YP_004668492.1 COG5430 Uncharacterized secreted protein YP_004668493.1 COG1729 Uncharacterized protein conserved in bacteria YP_004668497.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_004668499.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_004668500.1 COG0457 FOG: TPR repeat YP_004668501.1 COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold YP_004668502.1 COG0249 Mismatch repair ATPase (MutS family) YP_004668503.1 COG3004 Na+/H+ antiporter YP_004668505.1 COG0661 Predicted unusual protein kinase YP_004668506.1 COG5502 Uncharacterized conserved protein YP_004668507.1 COG4188 Predicted dienelactone hydrolase YP_004668510.1 COG1064 Zn-dependent alcohol dehydrogenases YP_004668513.1 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases YP_004668514.1 COG0841 Cation/multidrug efflux pump YP_004668515.1 COG0845 Membrane-fusion protein YP_004668516.1 COG1538 Outer membrane protein YP_004668518.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_004668519.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_004668520.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component YP_004668521.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_004668522.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component YP_004668523.1 COG3950 Predicted ATP-binding protein involved in virulence YP_004668524.1 COG0513 Superfamily II DNA and RNA helicases YP_004668525.1 COG3182 Uncharacterized iron-regulated membrane protein YP_004668526.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_004668527.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_004668528.1 COG0067 Glutamate synthase domain 1 YP_004668529.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases YP_004668530.1 COG0782 Transcription elongation factor YP_004668531.1 COG1192 ATPases involved in chromosome partitioning YP_004668532.1 COG4886 Leucine-rich repeat (LRR) protein YP_004668533.1 COG3148 Uncharacterized conserved protein YP_004668534.1 COG0597 Lipoprotein signal peptidase YP_004668535.1 COG0597 Lipoprotein signal peptidase YP_004668536.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_004668537.1 COG3604 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains YP_004668540.1 COG0515 Serine/threonine protein kinase YP_004668541.1 COG1716 FOG: FHA domain YP_004668543.1 COG0585 Uncharacterized conserved protein YP_004668544.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004668546.1 COG4796 Type II secretory pathway, component HofQ YP_004668547.1 COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases YP_004668548.1 COG0579 Predicted dehydrogenase YP_004668549.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004668550.1 COG0300 Short-chain dehydrogenases of various substrate specificities YP_004668551.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_004668553.1 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) YP_004668554.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_004668555.1 COG0708 Exonuclease III YP_004668556.1 COG2374 Predicted extracellular nuclease YP_004668558.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004668560.1 COG0642 Signal transduction histidine kinase YP_004668562.1 COG0606 Predicted ATPase with chaperone activity YP_004668566.1 COG1960 Acyl-CoA dehydrogenases YP_004668568.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_004668570.1 COG0587 DNA polymerase III, alpha subunit YP_004668572.1 COG1585 Membrane protein implicated in regulation of membrane protease activity YP_004668573.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_004668578.1 COG1404 Subtilisin-like serine proteases YP_004668580.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_004668581.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_004668582.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_004668583.1 COG0077 Prephenate dehydratase YP_004668584.1 COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair YP_004668585.1 COG0468 RecA/RadA recombinase YP_004668587.1 COG0466 ATP-dependent Lon protease, bacterial type YP_004668588.1 COG1388 FOG: LysM repeat YP_004668592.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_004668593.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668594.1 COG3321 Polyketide synthase modules and related proteins YP_004668595.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668596.1 COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) YP_004668597.1 COG1573 Uracil-DNA glycosylase YP_004668598.1 COG1716 FOG: FHA domain YP_004668599.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004668605.1 COG0457 FOG: TPR repeat YP_004668606.1 COG0205 6-phosphofructokinase YP_004668607.1 COG0515 Serine/threonine protein kinase YP_004668608.1 COG0457 FOG: TPR repeat YP_004668609.1 COG1716 FOG: FHA domain YP_004668613.1 COG0457 FOG: TPR repeat YP_004668616.1 COG0323 DNA mismatch repair enzyme (predicted ATPase) YP_004668617.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_004668618.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_004668619.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_004668621.1 COG5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives YP_004668622.1 COG2340 Uncharacterized protein with SCP/PR1 domains YP_004668623.1 COG1729 Uncharacterized protein conserved in bacteria YP_004668624.1 COG0625 Glutathione S-transferase YP_004668625.1 COG0283 Cytidylate kinase YP_004668626.1 COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase YP_004668627.1 COG0825 Acetyl-CoA carboxylase alpha subunit YP_004668628.1 COG0457 FOG: TPR repeat YP_004668629.1 COG0003 Oxyanion-translocating ATPase YP_004668630.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004668631.1 COG0642 Signal transduction histidine kinase YP_004668632.1 COG2131 Deoxycytidylate deaminase YP_004668633.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004668634.1 COG2766 Putative Ser protein kinase YP_004668635.1 COG0443 Molecular chaperone YP_004668636.1 COG3670 Lignostilbene-alpha,beta-dioxygenase and related enzymes YP_004668637.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_004668638.1 COG0840 Methyl-accepting chemotaxis protein YP_004668639.1 COG0835 Chemotaxis signal transduction protein YP_004668640.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_004668641.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_004668643.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_004668644.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_004668646.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_004668647.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_004668651.1 COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) YP_004668652.1 COG1233 Phytoene dehydrogenase and related proteins YP_004668653.1 COG0515 Serine/threonine protein kinase YP_004668654.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_004668657.1 COG0101 Pseudouridylate synthase YP_004668660.1 COG1606 ATP-utilizing enzymes of the PP-loop superfamily YP_004668661.1 COG0529 Adenylylsulfate kinase and related kinases YP_004668662.1 COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily YP_004668663.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_004668664.1 COG1977 Molybdopterin converting factor, small subunit YP_004668665.1 COG0425 Predicted redox protein, regulator of disulfide bond formation YP_004668666.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 YP_004668668.1 COG4585 Signal transduction histidine kinase YP_004668669.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_004668670.1 COG1131 ABC-type multidrug transport system, ATPase component YP_004668671.1 COG0308 Aminopeptidase N YP_004668674.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_004668675.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668676.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668678.1 COG0513 Superfamily II DNA and RNA helicases YP_004668679.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_004668680.1 COG0545 FKBP-type peptidyl-prolyl cis-trans isomerases 1 YP_004668681.1 COG1408 Predicted phosphohydrolases YP_004668682.1 COG0428 Predicted divalent heavy-metal cations transporter YP_004668683.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004668685.1 COG2139 Ribosomal protein L21E YP_004668688.1 COG0628 Predicted permease YP_004668691.1 COG3191 L-aminopeptidase/D-esterase YP_004668692.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_004668695.1 COG0113 Delta-aminolevulinic acid dehydratase YP_004668697.1 COG1131 ABC-type multidrug transport system, ATPase component YP_004668698.1 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component YP_004668702.1 COG1222 ATP-dependent 26S proteasome regulatory subunit YP_004668705.1 COG1055 Na+/H+ antiporter NhaD and related arsenite permeases YP_004668706.1 COG2130 Putative NADP-dependent oxidoreductases YP_004668707.1 COG3644 Uncharacterized protein conserved in bacteria YP_004668709.1 COG0583 Transcriptional regulator YP_004668710.1 COG1741 Pirin-related protein YP_004668712.1 COG0475 Kef-type K+ transport systems, membrane components YP_004668718.1 COG3335 Transposase and inactivated derivatives YP_004668719.1 COG3415 Transposase and inactivated derivatives YP_004668720.1 COG3328 Transposase and inactivated derivatives YP_004668722.1 COG4123 Predicted O-methyltransferase YP_004668726.1 COG0415 Deoxyribodipyrimidine photolyase YP_004668728.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_004668729.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_004668730.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_004668731.1 COG0840 Methyl-accepting chemotaxis protein YP_004668733.1 COG0835 Chemotaxis signal transduction protein YP_004668734.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004668735.1 COG2896 Molybdenum cofactor biosynthesis enzyme YP_004668736.1 COG0686 Alanine dehydrogenase YP_004668737.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004668739.1 COG5662 Predicted transmembrane transcriptional regulator (anti-sigma factor) YP_004668740.1 COG0784 FOG: CheY-like receiver YP_004668742.1 COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor YP_004668743.1 COG1654 Biotin operon repressor YP_004668744.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_004668745.1 COG1413 FOG: HEAT repeat YP_004668747.1 COG1520 FOG: WD40-like repeat YP_004668749.1 COG2021 Homoserine acetyltransferase YP_004668750.1 COG0572 Uridine kinase YP_004668751.1 COG3220 Uncharacterized protein conserved in bacteria YP_004668752.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_004668754.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004668755.1 COG0642 Signal transduction histidine kinase YP_004668761.1 COG0031 Cysteine synthase YP_004668762.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_004668763.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_004668764.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_004668765.1 COG0845 Membrane-fusion protein YP_004668766.1 COG1538 Outer membrane protein YP_004668768.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_004668770.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_004668772.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_004668773.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase YP_004668775.1 COG3876 Uncharacterized protein conserved in bacteria YP_004668776.1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) YP_004668777.1 COG0457 FOG: TPR repeat YP_004668778.1 COG1193 Mismatch repair ATPase (MutS family) YP_004668779.1 COG0457 FOG: TPR repeat YP_004668780.1 COG0143 Methionyl-tRNA synthetase YP_004668781.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004668782.1 COG0642 Signal transduction histidine kinase YP_004668783.1 COG1538 Outer membrane protein YP_004668784.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_004668785.1 COG0845 Membrane-fusion protein YP_004668786.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_004668787.1 COG0693 Putative intracellular protease/amidase YP_004668788.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004668789.1 COG0642 Signal transduction histidine kinase YP_004668791.1 COG1131 ABC-type multidrug transport system, ATPase component YP_004668792.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004668793.1 COG1408 Predicted phosphohydrolases YP_004668794.1 COG0457 FOG: TPR repeat YP_004668797.1 COG0557 Exoribonuclease R YP_004668799.1 COG0303 Molybdopterin biosynthesis enzyme YP_004668800.1 COG0807 GTP cyclohydrolase II YP_004668801.1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I YP_004668802.1 COG0321 Lipoate-protein ligase B YP_004668803.1 COG1219 ATP-dependent protease Clp, ATPase subunit YP_004668804.1 COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes YP_004668805.1 COG0320 Lipoate synthase YP_004668806.1 COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes YP_004668809.1 COG0139 Phosphoribosyl-AMP cyclohydrolase YP_004668810.1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family YP_004668811.1 COG0107 Imidazoleglycerol-phosphate synthase YP_004668812.1 COG0131 Imidazoleglycerol-phosphate dehydratase YP_004668813.1 COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase YP_004668814.1 COG0118 Glutamine amidotransferase YP_004668815.1 COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase YP_004668816.1 COG0141 Histidinol dehydrogenase YP_004668817.1 COG0040 ATP phosphoribosyltransferase YP_004668818.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_004668819.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_004668820.1 COG2896 Molybdenum cofactor biosynthesis enzyme YP_004668821.1 COG3296 Uncharacterized protein conserved in bacteria YP_004668822.1 COG0422 Thiamine biosynthesis protein ThiC YP_004668823.1 COG0517 FOG: CBS domain YP_004668824.1 COG0471 Di- and tricarboxylate transporters YP_004668826.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004668828.1 COG3682 Predicted transcriptional regulator YP_004668829.1 COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component YP_004668830.1 COG0642 Signal transduction histidine kinase YP_004668831.1 COG0784 FOG: CheY-like receiver YP_004668832.1 COG0642 Signal transduction histidine kinase YP_004668833.1 COG1388 FOG: LysM repeat YP_004668834.1 COG0583 Transcriptional regulator YP_004668835.1 COG5637 Predicted integral membrane protein YP_004668837.1 COG1926 Predicted phosphoribosyltransferases YP_004668838.1 COG3239 Fatty acid desaturase YP_004668839.1 COG0642 Signal transduction histidine kinase YP_004668840.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004668841.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004668843.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_004668844.1 COG4254 Uncharacterized protein conserved in bacteria YP_004668845.1 COG4252 Predicted transmembrane sensor domain YP_004668846.1 COG0784 FOG: CheY-like receiver YP_004668847.1 COG3555 Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases YP_004668852.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004668853.1 COG0642 Signal transduction histidine kinase YP_004668854.1 COG1309 Transcriptional regulator YP_004668855.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit YP_004668856.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit YP_004668857.1 COG1064 Zn-dependent alcohol dehydrogenases YP_004668858.1 COG3425 3-hydroxy-3-methylglutaryl CoA synthase YP_004668859.1 COG0071 Molecular chaperone (small heat shock protein) YP_004668861.1 COG2217 Cation transport ATPase YP_004668862.1 COG2217 Cation transport ATPase YP_004668868.1 COG4615 ABC-type siderophore export system, fused ATPase and permease components YP_004668869.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase YP_004668879.1 COG3208 Predicted thioesterase involved in non-ribosomal peptide biosynthesis YP_004668880.1 COG0236 Acyl carrier protein YP_004668881.1 COG3321 Polyketide synthase modules and related proteins YP_004668883.1 COG0003 Oxyanion-translocating ATPase YP_004668884.1 COG3621 Patatin YP_004668885.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668886.1 COG3321 Polyketide synthase modules and related proteins YP_004668887.1 COG3321 Polyketide synthase modules and related proteins YP_004668888.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668889.1 COG3321 Polyketide synthase modules and related proteins YP_004668890.1 COG3321 Polyketide synthase modules and related proteins YP_004668892.1 COG1524 Uncharacterized proteins of the AP superfamily YP_004668893.1 COG1960 Acyl-CoA dehydrogenases YP_004668894.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668897.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_004668898.1 COG2323 Predicted membrane protein YP_004668899.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004668900.1 COG0668 Small-conductance mechanosensitive channel YP_004668901.1 COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] YP_004668902.1 COG0277 FAD/FMN-containing dehydrogenases YP_004668903.1 COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily YP_004668904.1 COG2323 Predicted membrane protein YP_004668906.1 COG0842 ABC-type multidrug transport system, permease component YP_004668912.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase YP_004668915.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004668916.1 COG0576 Molecular chaperone GrpE (heat shock protein) YP_004668918.1 COG0465 ATP-dependent Zn proteases YP_004668920.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_004668921.1 COG1396 Predicted transcriptional regulators YP_004668922.1 COG0515 Serine/threonine protein kinase YP_004668923.1 COG0515 Serine/threonine protein kinase YP_004668924.1 COG1716 FOG: FHA domain YP_004668926.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_004668927.1 COG2823 Predicted periplasmic or secreted lipoprotein YP_004668928.1 COG2987 Urocanate hydratase YP_004668930.1 COG1228 Imidazolonepropionase and related amidohydrolases YP_004668931.1 COG1228 Imidazolonepropionase and related amidohydrolases YP_004668932.1 COG0121 Predicted glutamine amidotransferase YP_004668933.1 COG0802 Predicted ATPase or kinase YP_004668934.1 COG0062 Uncharacterized conserved protein YP_004668935.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase) YP_004668936.1 COG0854 Pyridoxal phosphate biosynthesis protein YP_004668937.1 COG1109 Phosphomannomutase YP_004668938.1 COG0294 Dihydropteroate synthase and related enzymes YP_004668939.1 COG1765 Predicted redox protein, regulator of disulfide bond formation YP_004668940.1 COG2353 Uncharacterized conserved protein YP_004668941.1 COG0583 Transcriptional regulator YP_004668942.1 COG1741 Pirin-related protein YP_004668943.1 COG1741 Pirin-related protein YP_004668944.1 COG0465 ATP-dependent Zn proteases YP_004668945.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control YP_004668948.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_004668949.1 COG4771 Outer membrane receptor for ferrienterochelin and colicins YP_004668950.1 COG3016 Uncharacterized iron-regulated protein YP_004668953.1 COG0500 SAM-dependent methyltransferases YP_004668954.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004668955.1 COG0515 Serine/threonine protein kinase YP_004668956.1 COG1396 Predicted transcriptional regulators YP_004668957.1 COG0515 Serine/threonine protein kinase YP_004668961.1 COG3246 Uncharacterized conserved protein YP_004668962.1 COG1607 Acyl-CoA hydrolase YP_004668963.1 COG5012 Predicted cobalamin binding protein YP_004668966.1 COG0753 Catalase YP_004668967.1 COG0666 FOG: Ankyrin repeat YP_004668968.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_004668969.1 COG2382 Enterochelin esterase and related enzymes YP_004668970.1 COG1573 Uracil-DNA glycosylase YP_004668971.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism YP_004668972.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase YP_004668973.1 COG3485 Protocatechuate 3,4-dioxygenase beta subunit YP_004668974.1 COG0631 Serine/threonine protein phosphatase YP_004668975.1 COG1716 FOG: FHA domain YP_004668978.1 COG1834 N-Dimethylarginine dimethylaminohydrolase YP_004668979.1 COG3321 Polyketide synthase modules and related proteins YP_004668980.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668981.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668982.1 COG1020 Non-ribosomal peptide synthetase modules and related proteins YP_004668983.1 COG0477 Permeases of the major facilitator superfamily YP_004668984.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_004668986.1 COG0583 Transcriptional regulator YP_004668987.1 COG0702 Predicted nucleoside-diphosphate-sugar epimerases YP_004668988.1 COG0394 Protein-tyrosine-phosphatase YP_004668989.1 COG0798 Arsenite efflux pump ACR3 and related permeases YP_004668990.1 COG0640 Predicted transcriptional regulators YP_004668991.1 COG2059 Chromate transport protein ChrA YP_004668992.1 COG2259 Predicted membrane protein YP_004668995.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004668996.1 COG3387 Glucoamylase and related glycosyl hydrolases YP_004669000.1 COG2334 Putative homoserine kinase type II (protein kinase fold) YP_004669002.1 COG1538 Outer membrane protein YP_004669003.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_004669004.1 COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain YP_004669005.1 COG0845 Membrane-fusion protein YP_004669006.1 COG3607 Predicted lactoylglutathione lyase YP_004669008.1 COG2119 Predicted membrane protein YP_004669012.1 COG0392 Predicted integral membrane protein YP_004669013.1 COG4464 Capsular polysaccharide biosynthesis protein YP_004669014.1 COG3024 Uncharacterized protein conserved in bacteria YP_004669015.1 COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductases YP_004669016.1 COG0666 FOG: Ankyrin repeat YP_004669017.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family YP_004669018.1 COG0784 FOG: CheY-like receiver YP_004669019.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain YP_004669020.1 COG0515 Serine/threonine protein kinase YP_004669021.1 COG3268 Uncharacterized conserved protein YP_004669022.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_004669023.1 COG0346 Lactoylglutathione lyase and related lyases YP_004669024.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004669028.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_004669029.1 COG3712 Fe2+-dicitrate sensor, membrane component YP_004669030.1 COG0642 Signal transduction histidine kinase YP_004669031.1 COG0784 FOG: CheY-like receiver YP_004669032.1 COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidases) YP_004669033.1 COG0457 FOG: TPR repeat YP_004669035.1 COG0739 Membrane proteins related to metalloendopeptidases YP_004669036.1 COG0496 Predicted acid phosphatase YP_004669037.1 COG0148 Enolase YP_004669038.1 COG1397 ADP-ribosylglycohydrolase YP_004669040.1 COG2867 Oligoketide cyclase/lipid transport protein YP_004669041.1 COG1494 Fructose-1,6-bisphosphatase/sedoheptulose 1,7-bisphosphatase and related proteins YP_004669042.1 COG0824 Predicted thioesterase YP_004669043.1 COG1524 Uncharacterized proteins of the AP superfamily YP_004669044.1 COG0157 Nicotinate-nucleotide pyrophosphorylase YP_004669045.1 COG0525 Valyl-tRNA synthetase YP_004669047.1 COG0784 FOG: CheY-like receiver YP_004669049.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_004669050.1 COG3461 Uncharacterized conserved protein YP_004669051.1 COG0642 Signal transduction histidine kinase YP_004669053.1 COG0459 Chaperonin GroEL (HSP60 family) YP_004669054.1 COG0784 FOG: CheY-like receiver YP_004669055.1 COG0457 FOG: TPR repeat YP_004669056.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_004669057.1 COG1309 Transcriptional regulator YP_004669058.1 COG2865 Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen YP_004669059.1 COG3293 Transposase and inactivated derivatives YP_004669062.1 COG1357 Uncharacterized low-complexity proteins YP_004669065.1 COG3497 Phage tail sheath protein FI YP_004669067.1 COG0443 Molecular chaperone YP_004669072.1 COG3501 Uncharacterized protein conserved in bacteria YP_004669074.1 COG3628 Phage baseplate assembly protein W YP_004669081.1 COG0464 ATPases of the AAA+ class YP_004669085.1 COG0805 Sec-independent protein secretion pathway component TatC YP_004669086.1 COG3119 Arylsulfatase A and related enzymes YP_004669087.1 COG1653 ABC-type sugar transport system, periplasmic component YP_004669089.1 COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II YP_004669090.1 COG0477 Permeases of the major facilitator superfamily YP_004669091.1 COG3979 Uncharacterized protein contain chitin-binding domain type 3 YP_004669092.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004669096.1 COG0433 Predicted ATPase YP_004669099.1 COG2374 Predicted extracellular nuclease YP_004669100.1 COG2353 Uncharacterized conserved protein YP_004669101.1 COG1032 Fe-S oxidoreductase YP_004669102.1 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) YP_004669104.1 COG1611 Predicted Rossmann fold nucleotide-binding protein YP_004669106.1 COG0457 FOG: TPR repeat YP_004669107.1 COG0640 Predicted transcriptional regulators YP_004669108.1 COG3832 Uncharacterized conserved protein YP_004669109.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_004669116.1 COG0515 Serine/threonine protein kinase YP_004669118.1 COG4771 Outer membrane receptor for ferrienterochelin and colicins YP_004669120.1 COG0457 FOG: TPR repeat YP_004669121.1 COG2208 Serine phosphatase RsbU, regulator of sigma subunit YP_004669122.1 COG1994 Zn-dependent proteases YP_004669124.1 COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit YP_004669125.1 COG0022 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit YP_004669126.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_004669129.1 COG2755 Lysophospholipase L1 and related esterases YP_004669131.1 COG2352 Phosphoenolpyruvate carboxylase YP_004669133.1 COG4581 Superfamily II RNA helicase YP_004669135.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_004669136.1 COG0642 Signal transduction histidine kinase YP_004669137.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004669140.1 COG1042 Acyl-CoA synthetase (NDP forming) YP_004669143.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004669144.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_004669145.1 COG5340 Predicted transcriptional regulator YP_004669146.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004669147.1 COG4121 Uncharacterized conserved protein YP_004669148.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_004669149.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains YP_004669151.1 COG3525 N-acetyl-beta-hexosaminidase YP_004669152.1 COG1295 Predicted membrane protein YP_004669154.1 COG0457 FOG: TPR repeat YP_004669155.1 COG0515 Serine/threonine protein kinase YP_004669156.1 COG3832 Uncharacterized conserved protein YP_004669157.1 COG0477 Permeases of the major facilitator superfamily YP_004669158.1 COG1898 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes YP_004669159.1 COG1209 dTDP-glucose pyrophosphorylase YP_004669160.1 COG1091 dTDP-4-dehydrorhamnose reductase YP_004669161.1 COG1088 dTDP-D-glucose 4,6-dehydratase YP_004669162.1 COG0438 Glycosyltransferase YP_004669165.1 COG0438 Glycosyltransferase YP_004669166.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_004669168.1 COG0438 Glycosyltransferase YP_004669169.1 COG0500 SAM-dependent methyltransferases YP_004669170.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_004669171.1 COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component YP_004669172.1 COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component YP_004669173.1 COG0558 Phosphatidylglycerophosphate synthase YP_004669174.1 COG0457 FOG: TPR repeat YP_004669175.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_004669176.1 COG0029 Aspartate oxidase YP_004669177.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_004669178.1 COG1611 Predicted Rossmann fold nucleotide-binding protein YP_004669180.1 COG0461 Orotate phosphoribosyltransferase YP_004669181.1 COG1475 Predicted transcriptional regulators YP_004669182.1 COG1664 Integral membrane protein CcmA involved in cell shape determination YP_004669183.1 COG1664 Integral membrane protein CcmA involved in cell shape determination YP_004669184.1 COG1664 Integral membrane protein CcmA involved in cell shape determination YP_004669185.1 COG2267 Lysophospholipase YP_004669186.1 COG0457 FOG: TPR repeat YP_004669187.1 COG0642 Signal transduction histidine kinase YP_004669189.1 COG1189 Predicted rRNA methylase YP_004669190.1 COG1154 Deoxyxylulose-5-phosphate synthase YP_004669191.1 COG0142 Geranylgeranyl pyrophosphate synthase YP_004669192.1 COG0784 FOG: CheY-like receiver YP_004669193.1 COG1722 Exonuclease VII small subunit YP_004669194.1 COG1570 Exonuclease VII, large subunit YP_004669195.1 COG1716 FOG: FHA domain YP_004669196.1 COG1716 FOG: FHA domain YP_004669197.1 COG2064 Flp pilus assembly protein TadC YP_004669198.1 COG4965 Flp pilus assembly protein TadB YP_004669199.1 COG3745 Flp pilus assembly protein CpaB YP_004669208.1 COG5662 Predicted transmembrane transcriptional regulator (anti-sigma factor) YP_004669209.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004669211.1 COG4608 ABC-type oligopeptide transport system, ATPase component YP_004669212.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component YP_004669213.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_004669214.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_004669216.1 COG0811 Biopolymer transport proteins YP_004669217.1 COG0848 Biopolymer transport protein YP_004669218.1 COG1960 Acyl-CoA dehydrogenases YP_004669219.1 COG2030 Acyl dehydratase YP_004669220.1 COG2030 Acyl dehydratase YP_004669221.1 COG3804 Uncharacterized conserved protein related to dihydrodipicolinate reductase YP_004669222.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_004669223.1 COG1413 FOG: HEAT repeat YP_004669225.1 COG0714 MoxR-like ATPases YP_004669226.1 COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) YP_004669227.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_004669228.1 COG1193 Mismatch repair ATPase (MutS family) YP_004669230.1 COG1801 Uncharacterized conserved protein YP_004669231.1 COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase YP_004669232.1 COG0173 Aspartyl-tRNA synthetase YP_004669235.1 COG2217 Cation transport ATPase YP_004669236.1 COG0608 Single-stranded DNA-specific exonuclease YP_004669238.1 COG0341 Preprotein translocase subunit SecF YP_004669239.1 COG0342 Preprotein translocase subunit SecD YP_004669240.1 COG1862 Preprotein translocase subunit YajC YP_004669241.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase YP_004669242.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase) YP_004669243.1 COG2385 Sporulation protein and related proteins YP_004669247.1 COG1509 Lysine 2,3-aminomutase YP_004669248.1 COG1509 Lysine 2,3-aminomutase YP_004669249.1 COG0515 Serine/threonine protein kinase YP_004669251.1 COG0194 Guanylate kinase YP_004669252.1 COG1561 Uncharacterized stress-induced protein YP_004669253.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_004669254.1 COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase YP_004669255.1 COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase YP_004669256.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase YP_004669257.1 COG0438 Glycosyltransferase YP_004669258.1 COG0438 Glycosyltransferase YP_004669259.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase YP_004669260.1 COG0613 Predicted metal-dependent phosphoesterases (PHP family) YP_004669261.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_004669262.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004669263.1 COG0763 Lipid A disaccharide synthetase YP_004669264.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_004669265.1 COG2095 Multiple antibiotic transporter YP_004669267.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_004669268.1 COG1716 FOG: FHA domain YP_004669270.1 COG0515 Serine/threonine protein kinase YP_004669272.1 COG3494 Uncharacterized protein conserved in bacteria YP_004669273.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase YP_004669274.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases YP_004669275.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_004669276.1 COG2825 Outer membrane protein YP_004669277.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_004669278.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_004669279.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component YP_004669280.1 COG1190 Lysyl-tRNA synthetase (class II) YP_004669282.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004669283.1 COG1186 Protein chain release factor B YP_004669285.1 COG0662 Mannose-6-phosphate isomerase YP_004669286.1 COG1480 Predicted membrane-associated HD superfamily hydrolase YP_004669287.1 COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase YP_004669288.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_004669289.1 COG0457 FOG: TPR repeat YP_004669290.1 COG1694 Predicted pyrophosphatase YP_004669291.1 COG0268 Ribosomal protein S20 YP_004669294.1 COG0495 Leucyl-tRNA synthetase YP_004669295.1 COG1629 Outer membrane receptor proteins, mostly Fe transport YP_004669297.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases YP_004669299.1 COG1131 ABC-type multidrug transport system, ATPase component YP_004669300.1 COG0784 FOG: CheY-like receiver YP_004669301.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_004669302.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_004669303.1 COG1413 FOG: HEAT repeat YP_004669305.1 COG0835 Chemotaxis signal transduction protein YP_004669306.1 COG0835 Chemotaxis signal transduction protein YP_004669307.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_004669308.1 COG0784 FOG: CheY-like receiver YP_004669309.1 COG0260 Leucyl aminopeptidase YP_004669310.1 COG0781 Transcription termination factor YP_004669311.1 COG0054 Riboflavin synthase beta-chain YP_004669312.1 COG0307 Riboflavin synthase alpha chain YP_004669313.1 COG0117 Pyrimidine deaminase YP_004669314.1 COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains YP_004669315.1 COG0112 Glycine/serine hydroxymethyltransferase YP_004669316.1 COG0698 Ribose 5-phosphate isomerase RpiB YP_004669317.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_004669318.1 COG0236 Acyl carrier protein YP_004669319.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) YP_004669320.1 COG0331 (acyl-carrier-protein) S-malonyltransferase YP_004669321.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme YP_004669322.1 COG0333 Ribosomal protein L32 YP_004669323.1 COG1399 Predicted metal-binding, possibly nucleic acid-binding protein YP_004669326.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004669327.1 COG0642 Signal transduction histidine kinase YP_004669328.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_004669329.1 COG2062 Phosphohistidine phosphatase SixA YP_004669330.1 COG0288 Carbonic anhydrase YP_004669331.1 COG0659 Sulfate permease and related transporters (MFS superfamily) YP_004669332.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004669333.1 COG0642 Signal transduction histidine kinase YP_004669334.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004669336.1 COG0226 ABC-type phosphate transport system, periplasmic component YP_004669337.1 COG0573 ABC-type phosphate transport system, permease component YP_004669338.1 COG0581 ABC-type phosphate transport system, permease component YP_004669339.1 COG1117 ABC-type phosphate transport system, ATPase component YP_004669340.1 COG0704 Phosphate uptake regulator YP_004669341.1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis YP_004669342.1 COG0784 FOG: CheY-like receiver YP_004669343.1 COG1253 Hemolysins and related proteins containing CBS domains YP_004669344.1 COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 YP_004669350.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_004669351.1 COG3501 Uncharacterized protein conserved in bacteria YP_004669352.1 COG3521 Uncharacterized protein conserved in bacteria YP_004669353.1 COG3522 Uncharacterized protein conserved in bacteria YP_004669354.1 COG3455 Uncharacterized protein conserved in bacteria YP_004669355.1 COG3523 Uncharacterized protein conserved in bacteria YP_004669356.1 COG3913 Uncharacterized protein conserved in bacteria YP_004669357.1 COG3515 Uncharacterized protein conserved in bacteria YP_004669358.1 COG3516 Uncharacterized protein conserved in bacteria YP_004669359.1 COG3517 Uncharacterized protein conserved in bacteria YP_004669360.1 COG3157 Hemolysin-coregulated protein (uncharacterized) YP_004669361.1 COG3518 Uncharacterized protein conserved in bacteria YP_004669362.1 COG3519 Uncharacterized protein conserved in bacteria YP_004669363.1 COG3520 Uncharacterized protein conserved in bacteria YP_004669364.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_004669367.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004669368.1 COG2273 Beta-glucanase/Beta-glucan synthetase YP_004669369.1 COG1118 ABC-type sulfate/molybdate transport systems, ATPase component YP_004669370.1 COG4208 ABC-type sulfate transport system, permease component YP_004669371.1 COG0555 ABC-type sulfate transport system, permease component YP_004669372.1 COG1613 ABC-type sulfate transport system, periplasmic component YP_004669374.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_004669375.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_004669376.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_004669377.1 COG0605 Superoxide dismutase YP_004669378.1 COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family YP_004669379.1 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs YP_004669380.1 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs YP_004669382.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_004669385.1 COG0477 Permeases of the major facilitator superfamily YP_004669386.1 COG5297 Cellobiohydrolase A (1,4-beta-cellobiosidase A) YP_004669387.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases YP_004669388.1 COG1748 Saccharopine dehydrogenase and related proteins YP_004669389.1 COG0583 Transcriptional regulator YP_004669390.1 COG0514 Superfamily II DNA helicase YP_004669391.1 COG1741 Pirin-related protein YP_004669394.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family YP_004669396.1 COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains YP_004669397.1 COG3436 Transposase and inactivated derivatives YP_004669399.1 COG1484 DNA replication protein YP_004669400.1 COG4584 Transposase and inactivated derivatives YP_004669401.1 COG3436 Transposase and inactivated derivatives YP_004669402.1 COG3436 Transposase and inactivated derivatives YP_004669404.1 COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains YP_004669407.1 COG1910 Periplasmic molybdate-binding protein/domain YP_004669408.1 COG0582 Integrase YP_004669409.1 COG0541 Signal recognition particle GTPase YP_004669412.1 COG2849 Uncharacterized protein conserved in bacteria YP_004669415.1 COG0457 FOG: TPR repeat YP_004669416.1 COG0457 FOG: TPR repeat YP_004669419.1 COG1716 FOG: FHA domain YP_004669421.1 COG0457 FOG: TPR repeat YP_004669422.1 COG1729 Uncharacterized protein conserved in bacteria YP_004669424.1 COG1484 DNA replication protein YP_004669425.1 COG1324 Uncharacterized protein involved in tolerance to divalent cations YP_004669427.1 COG3391 Uncharacterized conserved protein YP_004669428.1 COG0527 Aspartokinases YP_004669429.1 COG1131 ABC-type multidrug transport system, ATPase component YP_004669430.1 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component YP_004669431.1 COG3225 ABC-type uncharacterized transport system involved in gliding motility, auxiliary component YP_004669433.1 COG2129 Predicted phosphoesterases, related to the Icc protein YP_004669436.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004669440.1 COG0477 Permeases of the major facilitator superfamily YP_004669441.1 COG0033 Phosphoglucomutase YP_004669442.1 COG4270 Predicted membrane protein YP_004669443.1 COG1758 DNA-directed RNA polymerase, subunit K/omega YP_004669444.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes YP_004669447.1 COG0234 Co-chaperonin GroES (HSP10) YP_004669448.1 COG0459 Chaperonin GroEL (HSP60 family) YP_004669449.1 COG0695 Glutaredoxin and related proteins YP_004669454.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004669456.1 COG1196 Chromosome segregation ATPases YP_004669457.1 COG1253 Hemolysins and related proteins containing CBS domains YP_004669458.1 COG0457 FOG: TPR repeat YP_004669459.1 COG2843 Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) YP_004669461.1 COG0216 Protein chain release factor A YP_004669462.1 COG2890 Methylase of polypeptide chain release factors YP_004669463.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase YP_004669468.1 COG3794 Plastocyanin YP_004669469.1 COG0642 Signal transduction histidine kinase YP_004669470.1 COG0515 Serine/threonine protein kinase YP_004669471.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004669473.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_004669479.1 COG3670 Lignostilbene-alpha,beta-dioxygenase and related enzymes YP_004669480.1 COG1309 Transcriptional regulator YP_004669488.1 COG1533 DNA repair photolyase YP_004669489.1 COG2261 Predicted membrane protein YP_004669491.1 COG1932 Phosphoserine aminotransferase YP_004669492.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004669494.1 COG4249 Uncharacterized protein containing caspase domain YP_004669497.1 COG3219 Uncharacterized protein conserved in bacteria YP_004669498.1 COG3220 Uncharacterized protein conserved in bacteria YP_004669500.1 COG3975 Predicted protease with the C-terminal PDZ domain YP_004669502.1 COG1396 Predicted transcriptional regulators YP_004669503.1 COG0457 FOG: TPR repeat YP_004669505.1 COG0730 Predicted permeases YP_004669507.1 COG0260 Leucyl aminopeptidase YP_004669510.1 COG1651 Protein-disulfide isomerase YP_004669511.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase YP_004669513.1 COG2255 Holliday junction resolvasome, helicase subunit YP_004669514.1 COG0491 Zn-dependent hydrolases, including glyoxylases YP_004669516.1 COG0632 Holliday junction resolvasome, DNA-binding subunit YP_004669517.1 COG0817 Holliday junction resolvasome, endonuclease subunit YP_004669518.1 COG0217 Uncharacterized conserved protein YP_004669519.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004669521.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004669522.1 COG1258 Predicted pseudouridylate synthase YP_004669523.1 COG1572 Uncharacterized conserved protein YP_004669524.1 COG0266 Formamidopyrimidine-DNA glycosylase YP_004669525.1 COG0430 RNA 3'-terminal phosphate cyclase YP_004669526.1 COG1690 Uncharacterized conserved protein YP_004669527.1 COG4650 Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain YP_004669528.1 COG0006 Xaa-Pro aminopeptidase YP_004669531.1 COG0457 FOG: TPR repeat YP_004669532.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004669533.1 COG0642 Signal transduction histidine kinase YP_004669535.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily YP_004669537.1 COG3148 Uncharacterized conserved protein YP_004669538.1 COG3011 Uncharacterized protein conserved in bacteria YP_004669539.1 COG4232 Thiol:disulfide interchange protein YP_004669540.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs YP_004669541.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes YP_004669542.1 COG0822 NifU homolog involved in Fe-S cluster formation YP_004669543.1 COG0316 Uncharacterized conserved protein YP_004669544.1 COG1076 DnaJ-domain-containing proteins 1 YP_004669545.1 COG0443 Molecular chaperone YP_004669546.1 COG0633 Ferredoxin YP_004669547.1 COG0392 Predicted integral membrane protein YP_004669548.1 COG3051 Citrate lyase, alpha subunit YP_004669550.1 COG1287 Uncharacterized membrane protein, required for N-linked glycosylation YP_004669551.1 COG0076 Glutamate decarboxylase and related PLP-dependent proteins YP_004669553.1 COG1577 Mevalonate kinase YP_004669554.1 COG3407 Mevalonate pyrophosphate decarboxylase YP_004669555.1 COG1577 Mevalonate kinase YP_004669556.1 COG1257 Hydroxymethylglutaryl-CoA reductase YP_004669558.1 COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases YP_004669559.1 COG2210 Uncharacterized conserved protein YP_004669560.1 COG4772 Outer membrane receptor for Fe3+-dicitrate YP_004669564.1 COG0501 Zn-dependent protease with chaperone function YP_004669566.1 COG1846 Transcriptional regulators YP_004669567.1 COG1538 Outer membrane protein YP_004669568.1 COG0845 Membrane-fusion protein YP_004669569.1 COG0841 Cation/multidrug efflux pump YP_004669570.1 COG0642 Signal transduction histidine kinase YP_004669571.1 COG0612 Predicted Zn-dependent peptidases YP_004669572.1 COG0457 FOG: TPR repeat YP_004669573.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_004669574.1 COG0013 Alanyl-tRNA synthetase YP_004669575.1 COG5505 Predicted integral membrane protein YP_004669576.1 COG0076 Glutamate decarboxylase and related PLP-dependent proteins YP_004669577.1 COG2175 Probable taurine catabolism dioxygenase YP_004669578.1 COG3564 Uncharacterized protein conserved in bacteria YP_004669579.1 COG1012 NAD-dependent aldehyde dehydrogenases YP_004669580.1 COG3284 Transcriptional activator of acetoin/glycerol metabolism YP_004669581.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_004669583.1 COG0515 Serine/threonine protein kinase YP_004669585.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004669587.1 COG0784 FOG: CheY-like receiver YP_004669588.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004669589.1 COG0253 Diaminopimelate epimerase YP_004669592.1 COG0209 Ribonucleotide reductase, alpha subunit YP_004669593.1 COG0208 Ribonucleotide reductase, beta subunit YP_004669594.1 COG3328 Transposase and inactivated derivatives YP_004669598.1 COG0820 Predicted Fe-S-cluster redox enzyme YP_004669599.1 COG3666 Transposase and inactivated derivatives YP_004669600.1 COG1484 DNA replication protein YP_004669601.1 COG4584 Transposase and inactivated derivatives YP_004669608.1 COG2020 Putative protein-S-isoprenylcysteine methyltransferase YP_004669609.1 COG1404 Subtilisin-like serine proteases YP_004669611.1 COG1864 DNA/RNA endonuclease G, NUC1 YP_004669613.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase YP_004669614.1 COG5351 Uncharacterized protein conserved in bacteria YP_004669617.1 COG1280 Putative threonine efflux protein YP_004669618.1 COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) YP_004669620.1 COG0634 Hypoxanthine-guanine phosphoribosyltransferase YP_004669621.1 COG0035 Uracil phosphoribosyltransferase YP_004669622.1 COG1435 Thymidine kinase YP_004669624.1 COG2088 Uncharacterized protein, involved in the regulation of septum location YP_004669625.1 COG0462 Phosphoribosylpyrophosphate synthetase YP_004669626.1 COG1825 Ribosomal protein L25 (general stress protein Ctc) YP_004669627.1 COG0193 Peptidyl-tRNA hydrolase YP_004669628.1 COG0360 Ribosomal protein S6 YP_004669629.1 COG0238 Ribosomal protein S18 YP_004669630.1 COG0359 Ribosomal protein L9 YP_004669631.1 COG0305 Replicative DNA helicase YP_004669632.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase YP_004669633.1 COG2071 Predicted glutamine amidotransferases YP_004669634.1 COG0352 Thiamine monophosphate synthase YP_004669639.1 COG0542 ATPases with chaperone activity, ATP-binding subunit YP_004669640.1 COG0421 Spermidine synthase YP_004669641.1 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases YP_004669643.1 COG3488 Predicted thiol oxidoreductase YP_004669644.1 COG2311 Predicted membrane protein YP_004669645.1 COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase YP_004669648.1 COG1438 Arginine repressor YP_004669649.1 COG0078 Ornithine carbamoyltransferase YP_004669650.1 COG0548 Acetylglutamate kinase YP_004669651.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases YP_004669652.1 COG0165 Argininosuccinate lyase YP_004669653.1 COG0137 Argininosuccinate synthase YP_004669654.1 COG1492 Cobyric acid synthase YP_004669655.1 COG0002 Acetylglutamate semialdehyde dehydrogenase YP_004669656.1 COG0398 Uncharacterized conserved protein YP_004669657.1 COG0025 NhaP-type Na+/H+ and K+/H+ antiporters YP_004669659.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins YP_004669661.1 COG0101 Pseudouridylate synthase YP_004669662.1 COG0515 Serine/threonine protein kinase YP_004669667.1 COG1092 Predicted SAM-dependent methyltransferases YP_004669668.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_004669670.1 COG0789 Predicted transcriptional regulators YP_004669675.1 COG0421 Spermidine synthase YP_004669676.1 COG0642 Signal transduction histidine kinase YP_004669677.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004669678.1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases YP_004669679.1 COG3186 Phenylalanine-4-hydroxylase YP_004669680.1 COG0583 Transcriptional regulator YP_004669681.1 COG3083 Predicted hydrolase of alkaline phosphatase superfamily YP_004669683.1 COG1409 Predicted phosphohydrolases YP_004669684.1 COG1413 FOG: HEAT repeat YP_004669686.1 COG0249 Mismatch repair ATPase (MutS family) YP_004669687.1 COG0183 Acetyl-CoA acetyltransferase YP_004669688.1 COG1250 3-hydroxyacyl-CoA dehydrogenase YP_004669689.1 COG0308 Aminopeptidase N YP_004669690.1 COG0863 DNA modification methylase YP_004669691.1 COG0254 Ribosomal protein L31 YP_004669692.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_004669694.1 COG1729 Uncharacterized protein conserved in bacteria YP_004669695.1 COG1352 Methylase of chemotaxis methyl-accepting proteins YP_004669696.1 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain YP_004669700.1 COG0643 Chemotaxis protein histidine kinase and related kinases YP_004669701.1 COG0840 Methyl-accepting chemotaxis protein YP_004669702.1 COG0840 Methyl-accepting chemotaxis protein YP_004669704.1 COG0835 Chemotaxis signal transduction protein YP_004669705.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_004669706.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004669710.1 COG3436 Transposase and inactivated derivatives YP_004669713.1 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance) YP_004669714.1 COG0443 Molecular chaperone YP_004669716.1 COG1846 Transcriptional regulators YP_004669717.1 COG2259 Predicted membrane protein YP_004669718.1 COG2135 Uncharacterized conserved protein YP_004669720.1 COG1309 Transcriptional regulator YP_004669721.1 COG1309 Transcriptional regulator YP_004669722.1 COG0232 dGTP triphosphohydrolase YP_004669723.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_004669724.1 COG2303 Choline dehydrogenase and related flavoproteins YP_004669725.1 COG2234 Predicted aminopeptidases YP_004669726.1 COG1132 ABC-type multidrug transport system, ATPase and permease components YP_004669727.1 COG0577 ABC-type antimicrobial peptide transport system, permease component YP_004669729.1 COG0859 ADP-heptose:LPS heptosyltransferase YP_004669730.1 COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) YP_004669732.1 COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold YP_004669733.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004669734.1 COG4102 Uncharacterized protein conserved in bacteria YP_004669735.1 COG5267 Uncharacterized protein conserved in bacteria YP_004669736.1 COG0515 Serine/threonine protein kinase YP_004669738.1 COG0708 Exonuclease III YP_004669739.1 COG0457 FOG: TPR repeat YP_004669741.1 COG5009 Membrane carboxypeptidase/penicillin-binding protein YP_004669744.1 COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation YP_004669746.1 COG1544 Ribosome-associated protein Y (PSrp-1) YP_004669747.1 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain YP_004669749.1 COG1413 FOG: HEAT repeat YP_004669751.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_004669752.1 COG0585 Uncharacterized conserved protein YP_004669753.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_004669754.1 COG1651 Protein-disulfide isomerase YP_004669755.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D YP_004669756.1 COG2199 FOG: GGDEF domain YP_004669758.1 COG0828 Ribosomal protein S21 YP_004669759.1 COG1610 Uncharacterized conserved protein YP_004669761.1 COG0358 DNA primase (bacterial type) YP_004669762.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) YP_004669763.1 COG3695 Predicted methylated DNA-protein cysteine methyltransferase YP_004669765.1 COG1137 ABC-type (unclassified) transport system, ATPase component YP_004669770.1 COG2262 GTPases YP_004669771.1 COG1266 Predicted metal-dependent membrane protease YP_004669772.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_004669775.1 COG0751 Glycyl-tRNA synthetase, beta subunit YP_004669777.1 COG1310 Predicted metal-dependent protease of the PAD1/JAB1 superfamily YP_004669778.1 COG1250 3-hydroxyacyl-CoA dehydrogenase YP_004669780.1 COG5276 Uncharacterized conserved protein YP_004669782.1 COG2350 Uncharacterized protein conserved in bacteria YP_004669786.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_004669788.1 COG3507 Beta-xylosidase YP_004669790.1 COG2207 AraC-type DNA-binding domain-containing proteins YP_004669791.1 COG3227 Zinc metalloprotease (elastase) YP_004669792.1 COG3227 Zinc metalloprotease (elastase) YP_004669794.1 COG1864 DNA/RNA endonuclease G, NUC1 YP_004669796.1 COG1404 Subtilisin-like serine proteases YP_004669797.1 COG2020 Putative protein-S-isoprenylcysteine methyltransferase YP_004669798.1 COG1309 Transcriptional regulator YP_004669800.1 COG3832 Uncharacterized conserved protein YP_004669801.1 COG0640 Predicted transcriptional regulators YP_004669802.1 COG0477 Permeases of the major facilitator superfamily YP_004669804.1 COG3291 FOG: PKD repeat YP_004669805.1 COG2234 Predicted aminopeptidases YP_004669811.1 COG0846 NAD-dependent protein deacetylases, SIR2 family YP_004669812.1 COG3436 Transposase and inactivated derivatives YP_004669814.1 COG3328 Transposase and inactivated derivatives YP_004669815.1 COG3328 Transposase and inactivated derivatives YP_004669816.1 COG0515 Serine/threonine protein kinase YP_004669817.1 COG3328 Transposase and inactivated derivatives YP_004669818.1 COG3328 Transposase and inactivated derivatives YP_004669819.1 COG0582 Integrase YP_004669822.1 COG3415 Transposase and inactivated derivatives YP_004669823.1 COG3335 Transposase and inactivated derivatives YP_004669826.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein) YP_004669827.1 COG0457 FOG: TPR repeat YP_004669830.1 COG3391 Uncharacterized conserved protein YP_004669831.1 COG2909 ATP-dependent transcriptional regulator YP_004669832.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins YP_004669835.1 COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain YP_004669836.1 COG1278 Cold shock proteins YP_004669839.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004669840.1 COG0642 Signal transduction histidine kinase YP_004669842.1 COG0842 ABC-type multidrug transport system, permease component YP_004669843.1 COG1131 ABC-type multidrug transport system, ATPase component YP_004669844.1 COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor) YP_004669845.1 COG0457 FOG: TPR repeat YP_004669847.1 COG0443 Molecular chaperone YP_004669848.1 COG0443 Molecular chaperone YP_004669850.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_004669851.1 COG4247 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) YP_004669852.1 COG1089 GDP-D-mannose dehydratase YP_004669853.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_004669855.1 COG3236 Uncharacterized protein conserved in bacteria YP_004669857.1 COG0438 Glycosyltransferase YP_004669858.1 COG0438 Glycosyltransferase YP_004669860.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_004669861.1 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases YP_004669863.1 COG2062 Phosphohistidine phosphatase SixA YP_004669864.1 COG1965 Protein implicated in iron transport, frataxin homolog YP_004669865.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain YP_004669866.1 COG0233 Ribosome recycling factor YP_004669867.1 COG0528 Uridylate kinase YP_004669868.1 COG0264 Translation elongation factor Ts YP_004669869.1 COG0052 Ribosomal protein S2 YP_004669870.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase) YP_004669871.1 COG2933 Predicted SAM-dependent methyltransferase YP_004669872.1 COG2199 FOG: GGDEF domain YP_004669873.1 COG0739 Membrane proteins related to metalloendopeptidases YP_004669874.1 COG0631 Serine/threonine protein phosphatase YP_004669875.1 COG0497 ATPase involved in DNA repair YP_004669876.1 COG4715 Uncharacterized conserved protein YP_004669877.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins YP_004669879.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004669881.1 COG1309 Transcriptional regulator YP_004669882.1 COG0477 Permeases of the major facilitator superfamily YP_004669883.1 COG0669 Phosphopantetheine adenylyltransferase YP_004669884.1 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III YP_004669885.1 COG0296 1,4-alpha-glucan branching enzyme YP_004669886.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases YP_004669887.1 COG1434 Uncharacterized conserved protein YP_004669888.1 COG0061 Predicted sugar kinase YP_004669889.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004669890.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_004669891.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_004669892.1 COG0463 Glycosyltransferases involved in cell wall biogenesis YP_004669893.1 COG3394 Uncharacterized protein conserved in bacteria YP_004669894.1 COG0500 SAM-dependent methyltransferases YP_004669895.1 COG5542 Predicted integral membrane protein YP_004669896.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_004669897.1 COG0183 Acetyl-CoA acetyltransferase YP_004669898.1 COG0407 Uroporphyrinogen-III decarboxylase YP_004669899.1 COG0366 Glycosidases YP_004669900.1 COG0381 UDP-N-acetylglucosamine 2-epimerase YP_004669901.1 COG1523 Type II secretory pathway, pullulanase PulA and related glycosidases YP_004669902.1 COG3839 ABC-type sugar transport systems, ATPase components YP_004669903.1 COG2182 Maltose-binding periplasmic proteins/domains YP_004669904.1 COG3833 ABC-type maltose transport systems, permease component YP_004669906.1 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases YP_004669909.1 COG4992 Ornithine/acetylornithine aminotransferase YP_004669910.1 COG1651 Protein-disulfide isomerase YP_004669911.1 COG0450 Peroxiredoxin YP_004669912.1 COG1708 Predicted nucleotidyltransferases YP_004669916.1 COG1695 Predicted transcriptional regulators YP_004669918.1 COG3791 Uncharacterized conserved protein YP_004669920.1 COG3215 Tfp pilus assembly protein PilZ YP_004669922.1 COG3239 Fatty acid desaturase YP_004669924.1 COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold YP_004669925.1 COG0824 Predicted thioesterase YP_004669926.1 COG0665 Glycine/D-amino acid oxidases (deaminating) YP_004669930.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases YP_004669933.1 COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases YP_004669934.1 COG0451 Nucleoside-diphosphate-sugar epimerases YP_004669935.1 COG0625 Glutathione S-transferase YP_004669939.1 COG0612 Predicted Zn-dependent peptidases YP_004669941.1 COG0421 Spermidine synthase YP_004669942.1 COG3973 Superfamily I DNA and RNA helicases YP_004669943.1 COG0642 Signal transduction histidine kinase YP_004669946.1 COG1988 Predicted membrane-bound metal-dependent hydrolases YP_004669949.1 COG0120 Ribose 5-phosphate isomerase YP_004669952.1 COG0583 Transcriptional regulator YP_004669954.1 COG1393 Arsenate reductase and related proteins, glutaredoxin family YP_004669955.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_004669957.1 COG0457 FOG: TPR repeat YP_004669958.1 COG2845 Uncharacterized protein conserved in bacteria YP_004669959.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004669960.1 COG1126 ABC-type polar amino acid transport system, ATPase component YP_004669961.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain YP_004669962.1 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain YP_004669963.1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog YP_004669966.1 COG1112 Superfamily I DNA and RNA helicases and helicase subunits YP_004669967.1 COG1032 Fe-S oxidoreductase YP_004669970.1 COG3016 Uncharacterized iron-regulated protein YP_004669972.1 COG0564 Pseudouridylate synthases, 23S RNA-specific YP_004669973.1 COG0515 Serine/threonine protein kinase YP_004669975.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_004669976.1 COG1680 Beta-lactamase class C and other penicillin binding proteins YP_004669980.1 COG1522 Transcriptional regulators YP_004669981.1 COG1075 Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold YP_004669982.1 COG5380 Lipase chaperone YP_004669983.1 COG3791 Uncharacterized conserved protein YP_004669985.1 COG1671 Uncharacterized protein conserved in bacteria YP_004669986.1 COG2764 Uncharacterized protein conserved in bacteria YP_004669987.1 COG0588 Phosphoglycerate mutase 1 YP_004669989.1 COG3945 Uncharacterized conserved protein YP_004669990.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases YP_004669991.1 COG0348 Polyferredoxin YP_004669992.1 COG2010 Cytochrome c, mono- and diheme variants YP_004669994.1 COG3278 Cbb3-type cytochrome oxidase, subunit 1 YP_004669996.1 COG2217 Cation transport ATPase YP_004669998.1 COG4325 Predicted membrane protein YP_004669999.1 COG0569 K+ transport systems, NAD-binding component YP_004670000.1 COG0168 Trk-type K+ transport systems, membrane components YP_004670001.1 COG1309 Transcriptional regulator YP_004670002.1 COG1272 Predicted membrane protein, hemolysin III homolog YP_004670003.1 COG1309 Transcriptional regulator YP_004670004.1 COG4757 Predicted alpha/beta hydrolase YP_004670005.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_004670007.1 COG0673 Predicted dehydrogenases and related proteins YP_004670009.1 COG2010 Cytochrome c, mono- and diheme variants YP_004670011.1 COG5557 Polysulphide reductase YP_004670012.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing YP_004670014.1 COG2181 Nitrate reductase gamma subunit YP_004670015.1 COG3474 Cytochrome c2 YP_004670017.1 COG1858 Cytochrome c peroxidase YP_004670018.1 COG5544 Predicted periplasmic lipoprotein YP_004670020.1 COG3030 Protein affecting phage T7 exclusion by the F plasmid YP_004670022.1 COG1092 Predicted SAM-dependent methyltransferases YP_004670024.1 COG1929 Glycerate kinase YP_004670026.1 COG0110 Acetyltransferase (isoleucine patch superfamily) YP_004670027.1 COG3501 Uncharacterized protein conserved in bacteria YP_004670028.1 COG1335 Amidases related to nicotinamidase YP_004670029.1 COG1488 Nicotinic acid phosphoribosyltransferase YP_004670031.1 COG0221 Inorganic pyrophosphatase YP_004670032.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_004670033.1 COG2269 Truncated, possibly inactive, lysyl-tRNA synthetase (class II) YP_004670036.1 COG4260 Putative virion core protein (lumpy skin disease virus) YP_004670037.1 COG1668 ABC-type Na+ efflux pump, permease component YP_004670038.1 COG1131 ABC-type multidrug transport system, ATPase component YP_004670039.1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family YP_004670042.1 COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid) YP_004670043.1 COG1716 FOG: FHA domain YP_004670044.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004670045.1 COG1024 Enoyl-CoA hydratase/carnithine racemase YP_004670046.1 COG0511 Biotin carboxyl carrier protein YP_004670047.1 COG0439 Biotin carboxylase YP_004670049.1 COG0206 Cell division GTPase YP_004670050.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins YP_004670051.1 COG0849 Actin-like ATPase involved in cell division YP_004670052.1 COG1589 Cell division septal protein YP_004670053.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_004670054.1 COG0812 UDP-N-acetylmuramate dehydrogenase YP_004670055.1 COG0773 UDP-N-acetylmuramate-alanine ligase YP_004670056.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase YP_004670057.1 COG0772 Bacterial cell division membrane protein YP_004670058.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase YP_004670059.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase YP_004670060.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase YP_004670061.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase YP_004670062.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_004670064.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_004670065.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2 YP_004670067.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis YP_004670068.1 COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) YP_004670069.1 COG2001 Uncharacterized protein conserved in bacteria YP_004670071.1 COG1960 Acyl-CoA dehydrogenases YP_004670072.1 COG0640 Predicted transcriptional regulators YP_004670073.1 COG3832 Uncharacterized conserved protein YP_004670075.1 COG0515 Serine/threonine protein kinase YP_004670077.1 COG1329 Transcriptional regulators, similar to M. xanthus CarD YP_004670078.1 COG1913 Predicted Zn-dependent proteases YP_004670080.1 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family YP_004670084.1 COG1454 Alcohol dehydrogenase, class IV YP_004670085.1 COG0174 Glutamine synthetase YP_004670086.1 COG0518 GMP synthase - Glutamine amidotransferase domain YP_004670089.1 COG0628 Predicted permease YP_004670091.1 COG1158 Transcription termination factor YP_004670092.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II) YP_004670093.1 COG1254 Acylphosphatases YP_004670095.1 COG1530 Ribonucleases G and E YP_004670096.1 COG1295 Predicted membrane protein YP_004670097.1 COG0776 Bacterial nucleoid DNA-binding protein YP_004670098.1 COG4789 Type III secretory pathway, component EscV YP_004670099.1 COG1377 Flagellar biosynthesis pathway, component FlhB YP_004670100.1 COG1684 Flagellar biosynthesis pathway, component FliR YP_004670101.1 COG1987 Flagellar biosynthesis pathway, component FliQ YP_004670102.1 COG4790 Type III secretory pathway, component EscR YP_004670104.1 COG1868 Flagellar motor switch protein YP_004670106.1 COG4669 Type III secretory pathway, lipoprotein EscJ YP_004670110.1 COG0784 FOG: CheY-like receiver YP_004670112.1 COG0457 FOG: TPR repeat YP_004670114.1 COG0457 FOG: TPR repeat YP_004670115.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_004670116.1 COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain YP_004670118.1 COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) YP_004670119.1 COG0714 MoxR-like ATPases YP_004670120.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004670122.1 COG0526 Thiol-disulfide isomerase and thioredoxins YP_004670124.1 COG1716 FOG: FHA domain YP_004670125.1 COG3194 Ureidoglycolate hydrolase YP_004670126.1 COG4984 Predicted membrane protein YP_004670128.1 COG4929 Uncharacterized membrane-anchored protein YP_004670129.1 COG0581 ABC-type phosphate transport system, permease component YP_004670130.1 COG5398 Heme oxygenase YP_004670131.1 COG0500 SAM-dependent methyltransferases YP_004670132.1 COG0517 FOG: CBS domain YP_004670133.1 COG0428 Predicted divalent heavy-metal cations transporter YP_004670134.1 COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family) YP_004670137.1 COG0668 Small-conductance mechanosensitive channel YP_004670138.1 COG0784 FOG: CheY-like receiver YP_004670140.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) YP_004670141.1 COG3409 Putative peptidoglycan-binding domain-containing protein YP_004670142.1 COG1864 DNA/RNA endonuclease G, NUC1 YP_004670145.1 COG0464 ATPases of the AAA+ class YP_004670146.1 COG0515 Serine/threonine protein kinase YP_004670149.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component YP_004670152.1 COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components YP_004670153.1 COG1842 Phage shock protein A (IM30), suppresses sigma54-dependent transcription YP_004670154.1 COG0642 Signal transduction histidine kinase YP_004670155.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases YP_004670156.1 COG0295 Cytidine deaminase YP_004670158.1 COG2940 Proteins containing SET domain YP_004670160.1 COG0213 Thymidine phosphorylase YP_004670161.1 COG1744 Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein YP_004670162.1 COG3845 ABC-type uncharacterized transport systems, ATPase components YP_004670163.1 COG4603 ABC-type uncharacterized transport system, permease component YP_004670164.1 COG1079 Uncharacterized ABC-type transport system, permease component YP_004670165.1 COG0642 Signal transduction histidine kinase YP_004670167.1 COG1109 Phosphomannomutase YP_004670168.1 COG1734 DnaK suppressor protein YP_004670169.1 COG0274 Deoxyribose-phosphate aldolase YP_004670170.1 COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) YP_004670171.1 COG2333 Predicted hydrolase (metallo-beta-lactamase superfamily) YP_004670177.1 COG1579 Zn-ribbon protein, possibly nucleic acid-binding YP_004670178.1 COG0328 Ribonuclease HI YP_004670179.1 COG1715 Restriction endonuclease YP_004670180.1 COG0732 Restriction endonuclease S subunits YP_004670181.1 COG0286 Type I restriction-modification system methyltransferase subunit YP_004670182.1 COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases YP_004670183.1 COG3344 Retron-type reverse transcriptase YP_004670186.1 COG4941 Predicted RNA polymerase sigma factor containing a TPR repeat domain YP_004670188.1 COG0552 Signal recognition particle GTPase YP_004670189.1 COG0308 Aminopeptidase N YP_004670193.1 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis YP_004670194.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes YP_004670197.1 COG0793 Periplasmic protease YP_004670198.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_004670199.1 COG0739 Membrane proteins related to metalloendopeptidases YP_004670200.1 COG2177 Cell division protein YP_004670201.1 COG2884 Predicted ATPase involved in cell division YP_004670204.1 COG0796 Glutamate racemase YP_004670206.1 COG0811 Biopolymer transport proteins YP_004670207.1 COG0848 Biopolymer transport protein YP_004670208.1 COG0810 Periplasmic protein TonB, links inner and outer membranes YP_004670209.1 COG0823 Periplasmic component of the Tol biopolymer transport system YP_004670210.1 COG0248 Exopolyphosphatase YP_004670211.1 COG0477 Permeases of the major facilitator superfamily YP_004670212.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_004670214.1 COG4775 Outer membrane protein/protective antigen OMA87 YP_004670215.1 COG3960 Glyoxylate carboligase YP_004670216.1 COG3267 Type II secretory pathway, component ExeA (predicted ATPase) YP_004670217.1 COG0457 FOG: TPR repeat YP_004670218.1 COG0439 Biotin carboxylase YP_004670219.1 COG0511 Biotin carboxyl carrier protein YP_004670220.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) YP_004670223.1 COG0860 N-acetylmuramoyl-L-alanine amidase YP_004670224.1 COG3168 Tfp pilus assembly protein PilP YP_004670225.1 COG3167 Tfp pilus assembly protein PilO YP_004670226.1 COG3166 Tfp pilus assembly protein PilN YP_004670227.1 COG4972 Tfp pilus assembly protein, ATPase PilM YP_004670228.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004670229.1 COG0642 Signal transduction histidine kinase YP_004670230.1 COG1989 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases YP_004670231.1 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component YP_004670232.1 COG1131 ABC-type multidrug transport system, ATPase component YP_004670234.1 COG2165 Type II secretory pathway, pseudopilin PulG YP_004670235.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains YP_004670236.1 COG0642 Signal transduction histidine kinase YP_004670237.1 COG1459 Type II secretory pathway, component PulF YP_004670238.1 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT YP_004670239.1 COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB YP_004670240.1 COG0196 FAD synthase YP_004670241.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase YP_004670242.1 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain YP_004670243.1 COG0195 Transcription elongation factor YP_004670245.1 COG4633 Uncharacterized protein conserved in bacteria YP_004670246.1 COG2176 DNA polymerase III, alpha subunit (gram-positive type) YP_004670247.1 COG0840 Methyl-accepting chemotaxis protein YP_004670248.1 COG1413 FOG: HEAT repeat YP_004670250.1 COG3436 Transposase and inactivated derivatives YP_004670251.1 COG3436 Transposase and inactivated derivatives YP_004670252.1 COG1484 DNA replication protein YP_004670253.1 COG4584 Transposase and inactivated derivatives YP_004670254.1 COG1961 Site-specific recombinases, DNA invertase Pin homologs YP_004670259.1 COG1061 DNA or RNA helicases of superfamily II YP_004670264.1 COG2887 RecB family exonuclease YP_004670265.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases YP_004670270.1 COG0582 Integrase YP_004670276.1 COG5518 Bacteriophage capsid portal protein YP_004670279.1 COG0338 Site-specific DNA methylase YP_004670283.1 COG1484 DNA replication protein YP_004670284.1 COG2801 Transposase and inactivated derivatives YP_004670287.1 COG0515 Serine/threonine protein kinase YP_004670291.1 COG3943 Virulence protein YP_004670293.1 COG1741 Pirin-related protein YP_004670294.1 COG4912 Predicted DNA alkylation repair enzyme YP_004670296.1 COG2801 Transposase and inactivated derivatives YP_004670297.1 COG2963 Transposase and inactivated derivatives YP_004670298.1 COG4584 Transposase and inactivated derivatives