-- dump date 20120504_153627 -- class Genbank::CDS -- table cds_note -- id note YP_001911143.1 KEGG: gka:GKP35 hypothetical protein YP_001911144.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: gka:GKP36 chromosome partitioning protein YP_001911146.1 PFAM: helix-turn-helix domain protein; KEGG: lmo:lmo2408 hypothetical protein YP_001911147.1 KEGG: drm:Dred_2131 hypothetical protein YP_001911148.1 KEGG: ddi:DDBDRAFT_0218840 hypothetical protein YP_001911149.1 KEGG: btl:BALH_p0038 hypothetical protein YP_001911150.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR; KEGG: sen:SACE_5645 excisionase/Xis, DNA-binding YP_001911151.1 KEGG: mta:Moth_0361 phage integrase YP_001911153.1 KEGG: aoe:Clos_2622 hypothetical protein YP_001911155.1 PFAM: Resolvase domain; KEGG: bcz:pE33L54_0049 recombinase YP_001916188.1 KEGG: bcy:Bcer98_0001 chromosomal replication initiator protein DnaA; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA domain; Chromosomal replication initiator DnaA; SMART: AAA ATPase YP_001916189.1 KEGG: dsy:DSY0002 DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain YP_001916190.1 KEGG: ppe:PEPE_0003 S4-like RNA binding protein YP_001916191.1 TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: bcy:Bcer98_0004 DNA replication and repair protein RecF YP_001916192.1 KEGG: pca:Pcar_2226 hypothetical protein YP_001916193.1 KEGG: pth:PTH_0004 hypothetical protein YP_001916194.1 KEGG: bha:BH0006 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA gyrase subunit B domain protein; ATP-binding region ATPase domain protein; TOPRIM domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; SMART: DNA topoisomerase II YP_001916195.1 KEGG: chy:CHY_2704 DNA gyrase, A subunit; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_001916196.1 PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: cdf:CD3498 stage V sporulation protein B YP_001916197.1 TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: gur:Gura_2815 elongation factor G YP_001916198.1 TIGRFAM: D-alanine--D-alanine ligase; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; protein of unknown function DUF201; D-alanine--D-alanine ligase domain protein; KEGG: aoe:Clos_0292 D-alanine--D-alanine ligase YP_001916199.1 with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate YP_001916200.1 KEGG: aoe:Clos_0014 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like YP_001916201.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: sth:STH11 putative Cu-binding protein YP_001916202.1 KEGG: bha:BH0034 DNA polymerase III gamma and tau subunits; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; DNA polymerase III delta; SMART: AAA ATPase YP_001916203.1 PFAM: conserved hypothetical protein; KEGG: bld:BLi00029 hypothetical protein YP_001916204.1 KEGG: bha:BH0036 recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; SMART: Toprim sub domain protein YP_001916205.1 KEGG: tte:TTE0043 hypothetical protein YP_001916206.1 TIGRFAM: pro-sigmaK processing inhibitor BofA; KEGG: swo:Swol_0034 SigmaK-factor processing regulatory BofA YP_001916207.1 KEGG: chy:CHY_0042 hypothetical protein YP_001916208.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: amt:Amet_4657 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein YP_001916209.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: mta:Moth_0033 pyruvate flavodoxin/ferredoxin oxidoreductase-like YP_001916210.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: chy:CHY_0044 putative keto/oxoacid ferredoxin oxidoreductase, beta subunit YP_001916211.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: chy:CHY_0045 putative keto/oxoacid ferredoxin oxidoreductase, gamma subunit YP_001916212.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: chy:CHY_0046 putative keto/oxoacid ferredoxin oxidoreductase, delta subunit YP_001916213.1 PFAM: helix-turn-helix domain protein; TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: bca:BCE_A0167 helix-turn-helix/TPR domain protein YP_001916214.1 PFAM: cell division protein FtsA; KEGG: aoe:Clos_0911 cell division protein FtsA YP_001916215.1 PFAM: Integrase catalytic region; KEGG: pth:PTH_2713 hypothetical protein YP_001916216.1 KEGG: csc:Csac_1713 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: CBS domain containing protein; IMP dehydrogenase/GMP reductase YP_001916217.1 PFAM: sodium:neurotransmitter symporter; KEGG: amt:Amet_0315 sodium:neurotransmitter symporter YP_001916218.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: drm:Dred_1815 Orn/Lys/Arg decarboxylase, major region YP_001916219.1 SMART: AAA ATPase; KEGG: rca:Rcas_3721 single-stranded nucleic acid binding R3H domain protein YP_001916220.1 PFAM: thymidylate kinase; KEGG: amt:Amet_0082 dTMP kinase YP_001916221.1 PFAM: protein of unknown function DUF970; KEGG: bcl:ABC0051 hypothetical protein YP_001916222.1 PFAM: protein of unknown function DUF327; KEGG: ctc:CTC00667 hypothetical protein YP_001916223.1 PFAM: zinc/iron permease; KEGG: amt:Amet_4265 zinc/iron permease YP_001916224.1 PFAM: Integrase catalytic region; KEGG: cpr:CPR_0784 ISCpe7, transposase YP_001916225.1 KEGG: cth:Cthe_2105 DNA-directed DNA polymerase YP_001916226.1 PFAM: PSP1 domain protein; KEGG: ctc:CTC00222 tpl protein YP_001916227.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: amt:Amet_1618 UDP-N-acetylmuramyl-tripeptide synthetase YP_001916228.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: tte:TTE0104 predicted methyltransferase YP_001916229.1 TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain protein; KEGG: cac:CAC0310 regulators of stationary/sporulation gene expression, AbrB B.subtilis ortholog YP_001916230.1 TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: t-RNA-binding domain protein; tRNA synthetase class I (M); KEGG: gtn:GTNG_0030 methionine-tRNA ligase/methionyl-tRNA synthetase YP_001916231.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: tte:TTE0111 Mg-dependent DNase YP_001916232.1 TIGRFAM: rare lipoprotein A; PFAM: Rare lipoprotein A; G5 domain protein; KEGG: cha:CHAB381_0301 rare lipoprotein A RlpA YP_001916233.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: lin:lin0227 dimethyladenosine transferase (16S rRNA dimethylase) YP_001916234.1 PFAM: protein of unknown function DUF458; KEGG: chy:CHY_2615 hypothetical protein YP_001916235.1 PFAM: protein of unknown function DUF1021; KEGG: tte:TTE2561 hypothetical protein YP_001916236.1 KEGG: lin:lin2600 hypothetical protein YP_001916237.1 PFAM: Peptidoglycan-binding LysM; KEGG: tte:TTE2560 LysM-repeat proteins and domains YP_001916238.1 PFAM: protein of unknown function UPF0016; KEGG: amt:Amet_4793 protein of unknown function UPF0016 YP_001916239.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: tte:TTE0925 D-alanyl-D-alanine carboxypeptidase YP_001916240.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate YP_001916241.1 TIGRFAM: cyanophycinase; PFAM: peptidase S51 dipeptidase E; KEGG: aoe:Clos_2107 cyanophycinase YP_001916242.1 catalyze the formation of cyanophycin which may act to store excess nitrogen YP_001916243.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; KEGG: bce:BC0050 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_001916244.1 KEGG: pth:PTH_0098 hypothetical protein YP_001916245.1 TIGRFAM: pur operon repressor; PFAM: phosphoribosyltransferase; KEGG: bsu:BSU00470 purine operon repressor YP_001916246.1 PFAM: SpoVG family protein; KEGG: ssp:SSP2258 regulatory protein SpoVG YP_001916247.1 TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; transferase hexapeptide repeat containing protein; Nucleotidyl transferase; KEGG: tte:TTE2572 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) YP_001916248.1 KEGG: chy:CHY_0193 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_001916249.1 TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: ribosomal protein L25; KEGG: bld:BLi00065 50S ribosomal protein L25/general stress protein Ctc YP_001916250.1 PFAM: peptidyl-tRNA hydrolase; KEGG: bcl:ABC0081 peptidyl-tRNA hydrolase YP_001916251.1 PFAM: C4-dicarboxylate anaerobic carrier; AbgT putative transporter; short chain fatty acid transporter; KEGG: amt:Amet_0146 AbgT putative transporter YP_001916252.1 PFAM: protein of unknown function DUF204; KEGG: bca:BCE_5451 hypothetical protein YP_001916253.1 KEGG: amt:Amet_0159 hypothetical protein YP_001916254.1 KEGG: bha:BH0069 transcription-repair coupling factor (TrcF); TIGRFAM: transcription-repair coupling factor; PFAM: helicase domain protein; transcription factor CarD; TRCF domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases YP_001916255.1 TIGRFAM: transcriptional regulator, AbrB family; stage V sporulation protein T; PFAM: GAF domain protein; SpoVT/AbrB domain protein; KEGG: pth:PTH_0119 regulators of stationary/sporulation gene expression YP_001916256.1 TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: bcy:Bcer98_0051 MazG family protein YP_001916257.1 PFAM: histone family protein DNA-binding protein; KEGG: bha:BH3356 non-specific DNA-binding protein II (HB) (HU) YP_001916258.1 TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein; KEGG: amt:Amet_0168 SpoIID/LytB domain protein YP_001916259.1 TIGRFAM: sporulation protein YabP; PFAM: YabP family protein; KEGG: oih:OB0068 hypothetical protein YP_001916260.1 KEGG: cth:Cthe_2660 hypothetical protein YP_001916261.1 TIGRFAM: cell division protein FtsL; PFAM: Septum formation initiator; KEGG: gur:Gura_2306 septum formation initiator YP_001916262.1 PFAM: RNA binding S1 domain protein; KEGG: pth:PTH_0189 predicted RNA binding protein YP_001916263.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: drm:Dred_1139 signal transduction histidine kinase, nitrogen specific, NtrB YP_001916264.1 PFAM: Ppx/GppA phosphatase; KEGG: tte:TTE2442 exopolyphosphatase YP_001916265.1 KEGG: amt:Amet_0173 sporulation stage II, protein E; TIGRFAM: stage II sporulation protein E; PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein YP_001916266.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: aoe:Clos_0431 tRNA(Ile)-lysidine synthetase YP_001916267.1 KEGG: drm:Dred_2376 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_001916268.1 KEGG: drm:Dred_0126 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; AAA ATPase central domain protein; peptidase M41 FtsH extracellular; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001916269.1 KEGG: aoe:Clos_0445 membrane protein YP_001916270.1 PFAM: formate-tetrahydrofolate ligase FTHFS; KEGG: aoe:Clos_2127 formate--tetrahydrofolate ligase YP_001916271.1 KEGG: mbu:Mbur_2009 abortive infection protein YP_001916272.1 TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin protein ligase domain protein; biotin/lipoate A/B protein ligase; Helix-turn-helix type 11 domain protein; KEGG: cth:Cthe_2585 biotin--acetyl-CoA-carboxylase ligase YP_001916273.1 TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor; KEGG: pth:PTH_0258 putative transcriptional regulator YP_001916275.1 KEGG: amt:Amet_4161 hypothetical protein YP_001916276.1 KEGG: amt:Amet_4160 hypothetical protein YP_001916277.1 KEGG: drm:Dred_0663 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase YP_001916278.1 PFAM: DRTGG domain protein; KEGG: tte:TTE0885 hypothetical protein YP_001916279.1 PFAM: ATP-binding region ATPase domain protein; KEGG: tte:TTE0886 anti-sigma regulatory factor (Ser/Thr protein kinase) YP_001916280.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: tte:TTE0887 ferredoxin 2 YP_001916281.1 KEGG: amt:Amet_2277 HPr kinase YP_001916282.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: cth:Cthe_0337 PHP-like protein YP_001916283.1 TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: chy:CHY_0731 Fe-hydrogenase, gamma subunit YP_001916284.1 PFAM: ATP-binding region ATPase domain protein; KEGG: amt:Amet_2279 histidine kinase YP_001916285.1 KEGG: fno:Fnod_0994 ferredoxin-like protein YP_001916286.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: chy:CHY_0732 Fe-hydrogenase, beta subunit YP_001916287.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: chy:CHY_0733 NAD-dependent formate dehydrogenase, alpha subunit, selenocysteine-containing YP_001916288.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: bvu:BVU_1429 putative rubredoxin YP_001916289.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bha:BH0613 assimilatory nitrite reductase (subunit) YP_001916290.1 KEGG: chy:CHY_1575 potassium uptake protein KtrB; TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter YP_001916291.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: amt:Amet_1637 TrkA-N domain protein YP_001916292.1 PFAM: phosphatidylglycerophosphatase A; KEGG: mta:Moth_2001 protein of unknown function DUF64 YP_001916293.1 PFAM: aminotransferase class-III; KEGG: tte:TTE2339 PLP-dependent aminotransferase YP_001916294.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: ctc:CTC01338 sodium/proton antiporter ShaA YP_001916295.1 KEGG: pmo:Pmob_0648 ferripyochelin binding protein (fbp) YP_001916296.1 KEGG: swo:Swol_2559 hypothetical protein YP_001916297.1 KEGG: mta:Moth_1150 hypothetical protein YP_001916298.1 TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: tte:TTE1991 activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) YP_001916299.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: cno:NT01CX_1044 nifR3 family enzyme YP_001916300.1 KEGG: chy:CHY_2368 hypothetical protein YP_001916301.1 KEGG: mta:Moth_0149 hypothetical protein YP_001916302.1 PFAM: Shikimate/quinate 5-dehydrogenase; KEGG: chy:CHY_2367 hypothetical protein YP_001916303.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: drm:Dred_0174 transcription elongation factor GreA YP_001916304.1 TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: drm:Dred_0175 lysyl-tRNA synthetase YP_001916305.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB1691 choline ABC transporter permease YP_001916306.1 KEGG: pmo:Pmob_1126 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase YP_001916307.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_1634 binding-protein-dependent transport systems inner membrane component YP_001916308.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: pde:Pden_4888 substrate-binding region of ABC-type glycine betaine transport system YP_001916309.1 KEGG: amt:Amet_1018 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: CMP/dCMP deaminase zinc-binding; bifunctional deaminase-reductase domain protein YP_001916310.1 TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein; KEGG: llm:llmg_1531 RibB protein YP_001916311.1 KEGG: chy:CHY_1473 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II YP_001916312.1 KEGG: cbf:CLI_2919 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_001916313.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; KEGG: ckl:CKL_3756 NrdG YP_001916314.1 KEGG: pth:PTH_1842 oxygen-sensitive ribonucleoside-triphosphate reductase; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP-cone domain protein YP_001916315.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: chy:CHY_2475 iron-sulfur cluster-binding protein FixX YP_001916316.1 PFAM: monooxygenase FAD-binding; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mta:Moth_0060 FAD dependent oxidoreductase YP_001916317.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; Oligopeptidase F; KEGG: oih:OB1370 oligoendopeptidase F YP_001916318.1 KEGG: hsa:729395 hypothetical protein LOC729395 YP_001916319.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: csc:Csac_0456 RNA polymerase, sigma-24 subunit, ECF subfamily YP_001916320.1 PFAM: NADPH-dependent FMN reductase; KEGG: dps:DP0917 hypothetical protein YP_001916321.1 PFAM: protein of unknown function UPF0029; Domain of unknown function DUF1949; KEGG: tte:TTE1130 hypothetical protein YP_001916322.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; HI0933 family protein; KEGG: mta:Moth_2420 thioredoxin reductase YP_001916323.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: mta:Moth_0927 thioredoxin YP_001916324.1 TIGRFAM: Ku protein; PFAM: Ku domain protein; KEGG: drm:Dred_2003 Ku domain protein YP_001916325.1 PFAM: ATP dependent DNA ligase; KEGG: swo:Swol_1123 DNA ligase, putative YP_001916326.1 TIGRFAM: DNA polymerase LigD, polymerase domain protein; PFAM: DNA primase small subunit; KEGG: swo:Swol_1124 hypothetical protein YP_001916328.1 PFAM: amino acid-binding ACT domain protein; MgtC/SapB transporter; KEGG: amt:Amet_3081 MgtC/SapB transporter YP_001916329.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: swo:Swol_1977 hypothetical protein YP_001916330.1 PFAM: Firmicute transcriptional repressor of class III stress genes; KEGG: bha:BH0100 transcriptional repressor of class III stress genes YP_001916331.1 PFAM: UvrB/UvrC protein; KEGG: gka:GK0076 hypothetical protein YP_001916332.1 PFAM: ATP:guanido phosphotransferase; KEGG: bha:BH0102 ATP:guanido phosphotransferase YP_001916333.1 PFAM: UvrB/UvrC protein; AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: bha:BH0103 class III stress response-related ATPase YP_001916334.1 TIGRFAM: metal dependent phophohydrolase; PFAM: nucleic acid binding OB-fold tRNA/helicase-type; metal-dependent phosphohydrolase HD sub domain; KEGG: gur:Gura_2929 metal dependent phosphohydrolase YP_001916335.1 PFAM: protein of unknown function DUF964; KEGG: bpu:BPUM_0928 hypothetical protein YP_001916336.1 Catalyzes the rate-limiting step in dNTP synthesis YP_001916337.1 PFAM: beta-lactamase domain protein; KEGG: gur:Gura_0553 beta-lactamase domain protein YP_001916338.1 PFAM: Silent information regulator protein Sir2; KEGG: tte:TTE1740 NAD-dependent protein deacetylase, Sir2 family YP_001916339.1 PFAM: protein of unknown function DUF77; KEGG: bce:BC5008 hypothetical cytosolic protein YP_001916340.1 PFAM: putative rRNA methylase; KEGG: cdf:CD2049 hypothetical protein YP_001916341.1 KEGG: nph:NP5118A endonuclease IV; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2 YP_001916342.1 PFAM: protein of unknown function UPF0027; KEGG: tte:TTE0709 hypothetical protein YP_001916343.1 PFAM: Peptidase M23; KEGG: bha:BH2643 hypothetical protein YP_001916344.1 KEGG: tte:TTE2548 small, acid-soluble spore proteins, alpha/be YP_001916345.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents YP_001916346.1 non-specific DNA-binding; scans chromosomes during sporulation for DNA-damage; delays initiation of sporulation; participates in a checkpoint signaling cascade for cell-cycle progression and DNA repair YP_001916347.1 TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: swo:Swol_1031 hypothetical protein YP_001916348.1 KEGG: ckl:CKL_0198 hypothetical protein YP_001916349.1 PFAM: chemotaxis sensory transducer; KEGG: tte:TTE0646 methyl-accepting chemotaxis protein YP_001916350.1 KEGG: tte:TTE2425 hypothetical protein YP_001916351.1 PFAM: transcription factor CarD; KEGG: drm:Dred_0185 transcriptional regulator, CarD family YP_001916352.1 PFAM: PilT protein domain protein; deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein PINc; KEGG: tte:TTE2323 ATPase of the PilT family YP_001916353.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: aoe:Clos_0463 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_001916354.1 KEGG: gsu:GSU3367 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase YP_001916355.1 TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl-tRNA synthetase class Ic; KEGG: drm:Dred_0191 glutamyl-tRNA synthetase YP_001916356.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: pth:PTH_2396 transposase and inactivated derivatives YP_001916357.1 KEGG: chy:CHY_2339 serine acetyltransferase; TIGRFAM: serine O-acetyltransferase; PFAM: transferase hexapeptide repeat containing protein YP_001916358.1 KEGG: tte:TTE2315 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M); Cysteinyl-tRNA synthetase class Ia YP_001916359.1 PFAM: ribonuclease III; KEGG: tte:TTE2314 hypothetical protein YP_001916360.1 TIGRFAM: thymidylate synthase, flavin-dependent; PFAM: thymidylate synthase complementing protein ThyX; KEGG: swo:Swol_2353 thymidylate synthase complementing protein ThyX YP_001916361.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: amt:Amet_4497 RNA methyltransferase, TrmH family, group 3 YP_001916362.1 PFAM: protein of unknown function DUF901; KEGG: cdf:CD0056 hypothetical protein YP_001916363.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates YP_001916364.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_001916365.1 PFAM: ribosomal protein L33; KEGG: cbe:Cbei_0137 ribosomal protein L33 YP_001916366.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: tme:Tmel_0640 preprotein translocase, SecE subunit YP_001916367.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: KOW domain protein; NGN domain protein; KEGG: drm:Dred_0202 NusG antitermination factor YP_001916368.1 PFAM: ribosomal protein L11; KEGG: bay:RBAM_001270 RplK YP_001916369.1 PFAM: ribosomal protein L1; KEGG: mta:Moth_2471 50S ribosomal protein L1 YP_001916370.1 PFAM: ribosomal protein L10; KEGG: pth:PTH_0308 ribosomal protein L10 YP_001916371.1 TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; KEGG: swo:Swol_2343 ribosomal protein L7/L12 YP_001916372.1 PFAM: Integrase catalytic region; KEGG: pth:PTH_2713 hypothetical protein YP_001916373.1 TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 7; RNA polymerase Rpb2 domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 3; KEGG: bha:BH0126 DNA-directed RNA polymerase subunit beta YP_001916374.1 KEGG: mta:Moth_2467 DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein YP_001916375.1 PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: mta:Moth_2466 ribosomal protein L7Ae/L30e/S12e/Gadd45 YP_001916376.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance YP_001916377.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit YP_001916378.1 TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: cth:Cthe_2729 translation elongation factor G YP_001916379.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu YP_001916380.1 PFAM: ribosomal protein S10; KEGG: cth:Cthe_2902 ribosomal protein S10 YP_001916381.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin YP_001916382.1 PFAM: ribosomal protein L4/L1e; KEGG: aoe:Clos_0493 ribosomal protein L4/L1e YP_001916383.1 PFAM: Ribosomal protein L25/L23; KEGG: amt:Amet_4476 ribosomal protein L25/L23 YP_001916384.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation YP_001916385.1 TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; KEGG: drm:Dred_0219 ribosomal protein S19 YP_001916386.1 TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: dsy:DSY0476 50S ribosomal protein L22 YP_001916387.1 KEGG: pth:PTH_0326 ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein YP_001916388.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e YP_001916389.1 PFAM: ribosomal protein L29; KEGG: tte:TTE2284 50S ribosomal protein L29 YP_001916390.1 PFAM: ribosomal protein S17; KEGG: cno:NT01CX_1124 30S ribosomal protein S17 YP_001916391.1 TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; KEGG: gka:GK0116 50S ribosomal protein L14 YP_001916392.1 TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: tte:TTE2281 50S ribosomal protein L24 YP_001916393.1 PFAM: ribosomal protein L5; KEGG: cno:NT01CX_1127 50S ribosomal protein L5 YP_001916394.1 PFAM: ribosomal protein S14; KEGG: cth:Cthe_2916 ribosomal protein S14 YP_001916395.1 PFAM: ribosomal protein S8; KEGG: chy:CHY_2295 30S ribosomal protein S8 YP_001916396.1 PFAM: ribosomal protein L6; KEGG: drm:Dred_0230 ribosomal protein L6 YP_001916397.1 TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: tte:TTE2275 50S ribosomal protein L18 YP_001916398.1 TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 domain protein; Ribosomal protein S5; KEGG: drm:Dred_0232 ribosomal protein S5 YP_001916399.1 PFAM: ribosomal protein L30; KEGG: chy:CHY_2291 ribosomal protein L30 YP_001916400.1 PFAM: ribosomal protein L15; KEGG: tte:TTE2273 ribosomal protein L15 YP_001916401.1 TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: mta:Moth_2440 preprotein translocase subunit SecY YP_001916402.1 PFAM: adenylate kinase; adenylate kinase lid domain protein; KEGG: chy:CHY_1340 adenylate kinase YP_001916403.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: aoe:Clos_0514 methionine aminopeptidase, type I YP_001916404.1 KEGG: csc:Csac_2265 hypothetical protein YP_001916405.1 TIGRFAM: translation initiation factor IF-1; PFAM: RNA binding S1 domain protein; S1 IF1 family protein; KEGG: bcl:ABC0173 translation initiation factor IF-I YP_001916406.1 PFAM: ribosomal protein L36; KEGG: ssp:SSP0686 50S ribosomal protein L36 YP_001916407.1 PFAM: ribosomal protein S13; KEGG: mta:Moth_2434 30S ribosomal protein S13 YP_001916408.1 PFAM: ribosomal protein S11; KEGG: bsu:BSU01420 30S ribosomal protein S11 YP_001916409.1 PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: pth:PTH_0347 ribosomal protein S4 and related proteins YP_001916410.1 KEGG: gka:GK0133 DNA-directed RNA polymerase subunit alpha; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase alpha subunit domain protein; RNA polymerase dimerisation; RNA polymerase insert; SMART: RNA polymerase RpoA/D/Rpb3-type YP_001916411.1 PFAM: ribosomal protein L17; KEGG: tte:TTE2262 ribosomal protein L17 YP_001916412.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE2261 ABC-type cobalt transport system, ATPase component YP_001916413.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ctc:CTC02575 cobalt transport ATP-binding protein YP_001916414.1 PFAM: cobalt transport protein; KEGG: ctc:CTC02574 cobalt transport protein cbiQ YP_001916415.1 KEGG: drm:Dred_0255 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: tRNA pseudouridine synthase YP_001916416.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit YP_001916417.1 PFAM: ribosomal protein S9; KEGG: cth:Cthe_1782 30S ribosomal protein S9 YP_001916418.1 PFAM: Chromate transporter; KEGG: cba:CLB_0573 chromate transporter protein YP_001916419.1 PFAM: Chromate transporter; KEGG: cno:NT01CX_0484 chromate transport protein YP_001916420.1 PFAM: cell wall hydrolase/autolysin; KEGG: gtn:GTNG_0140 N-acetylmuramoyl-L-alanine amidase YP_001916421.1 KEGG: tme:Tmel_1815 GTPase-like protein YP_001916422.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: drm:Dred_2829 transposase IS116/IS110/IS902 family protein YP_001916423.1 TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: bha:BH2984 arginase YP_001916424.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: mta:Moth_2295 hypothetical protein YP_001916425.1 PFAM: AMMECR1 domain protein; KEGG: tle:Tlet_0435 AMMECR1 domain protein YP_001916426.1 PFAM: Radical SAM domain protein; KEGG: tle:Tlet_0436 radical SAM domain protein YP_001916427.1 PFAM: protein of unknown function DUF147; KEGG: mta:Moth_2248 protein of unknown function DUF147 YP_001916428.1 PFAM: YbbR family protein; KEGG: amt:Amet_4312 YbbR family protein YP_001916429.1 KEGG: tte:TTE2191 phosphomannomutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III YP_001916430.1 PFAM: Integrase catalytic region; KEGG: cpr:CPR_0784 ISCpe7, transposase YP_001916431.1 TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: glutamine amidotransferase class-II; sugar isomerase (SIS); KEGG: chy:CHY_2010 D-fructose-6-phosphate amidotransferase YP_001916432.1 PFAM: TnsA endonuclease; KEGG: bca:BCE_0174 Tn7-like transposition protein A YP_001916433.1 PFAM: Integrase catalytic region; KEGG: cth:Cthe_1116 HMG-I and HMG-Y, DNA-binding YP_001916434.1 SMART: AAA ATPase; KEGG: cth:Cthe_1115 Tn7-like transposition protein C YP_001916435.1 KEGG: cth:Cthe_1114 Tn7-like transposition protein D YP_001916436.1 KEGG: bca:BCE_0186 hypothetical protein YP_001916437.1 KEGG: mxa:MXAN_0168 sensory box histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001916438.1 PFAM: response regulator receiver; KEGG: pth:PTH_1670 response regulator YP_001916439.1 PFAM: response regulator receiver; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: aoe:Clos_1079 two component, sigma54 specific, transcriptional regulator, Fis family YP_001916440.1 PFAM: TrkA-N domain protein; KEGG: tle:Tlet_0894 TrkA-N domain protein YP_001916441.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: tma:TM1088 trk system potassium uptake protein TrkA YP_001916442.1 PFAM: cation transporter; KEGG: tpt:Tpet_1654 potassium uptake protein, TrkH family YP_001916443.1 PFAM: transposase IS3/IS911 family protein; KEGG: bcy:Bcer98_2284 transposase IS3/IS911 family protein YP_001916444.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ckl:CKL_1679 predicted RNA polymerase sigma factor YP_001916445.1 KEGG: cth:Cthe_1437 hypothetical protein YP_001916446.1 PFAM: sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: csc:Csac_0456 RNA polymerase, sigma-24 subunit, ECF subfamily YP_001916447.1 KEGG: amt:Amet_1809 hypothetical protein YP_001916449.1 KEGG: amt:Amet_2256 hypothetical protein YP_001916452.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: drm:Dred_2829 transposase IS116/IS110/IS902 family protein YP_001916454.1 PFAM: Peptidase M23; KEGG: rca:Rcas_2234 peptidase M23B YP_001916455.1 KEGG: pho:PH1043 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20 YP_001916456.1 PFAM: sodium/hydrogen exchanger; KEGG: amt:Amet_4404 sodium/hydrogen exchanger YP_001916457.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: amt:Amet_1416 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001916458.1 PFAM: GumN family protein; KEGG: amr:AM1_4632 GumN family protein YP_001916460.1 PFAM: sodium/calcium exchanger membrane region; KEGG: rca:Rcas_4299 sodium/calcium exchanger membrane region YP_001916462.1 PFAM: sodium/hydrogen exchanger; KEGG: cpy:Cphy_1689 sodium/hydrogen exchanger YP_001916463.1 KEGG: aoe:Clos_2092 conserved hypothetical protein YP_001916464.1 KEGG: bcz:pE33L466_0369 possible nitroreductase family protein YP_001916465.1 PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; O-methyltransferase family 3; KEGG: aoe:Clos_1657 O-methyltransferase family 3 YP_001916466.1 TIGRFAM: proton-coupled thiamine transporter YuaJ; PFAM: thiamine transporter YuaJ; KEGG: bsu:BSU30990 hypothetical protein YP_001916467.1 KEGG: amt:Amet_1745 hypothetical protein YP_001916468.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: dsy:DSY4185 hypothetical protein YP_001916469.1 PFAM: BioY protein; KEGG: mma:MM_1036 bioY protein YP_001916470.1 PFAM: AAA-4 family protein; KEGG: fps:FP1553 hypothetical protein YP_001916471.1 PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: amt:Amet_1491 protein of unknown function DUF405 YP_001916472.1 PFAM: GCN5-related N-acetyltransferase; KEGG: tte:TTE0537 acetyltransferase YP_001916473.1 PFAM: putative RNA methylase; KEGG: bha:BH1771 hypothetical protein YP_001916474.1 PFAM: protein of unknown function DUF541; KEGG: amt:Amet_1086 protein of unknown function DUF541 YP_001916475.1 PFAM: aminotransferase class I and II; KEGG: cbf:CLI_1497 aminotransferase, classes I and II YP_001916476.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rrs:RoseRS_2126 glyoxalase/bleomycin resistance protein/dioxygenase YP_001916478.1 KEGG: fno:Fnod_1307 pyridoxal phosphate-dependent acyltransferase, putative; TIGRFAM: pyridoxal phosphate-dependent acyltransferase; PFAM: aminotransferase class I and II; aminotransferase class-III YP_001916479.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: tte:TTE2405 L-threonine 3-dehydrogenase YP_001916480.1 KEGG: dsy:DSY2083 hypothetical protein YP_001916481.1 PFAM: ABC-1 domain protein; KEGG: gka:GK1754 ABC transporter YP_001916483.1 KEGG: rfr:Rfer_0891 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_001916484.1 PFAM: glycosyl transferase family 2; KEGG: tte:TTE1399 glycosyltransferase involved in cell wall biogenesis YP_001916485.1 PFAM: Glutaminase, core; KEGG: cpr:CPR_1963 glutaminase YP_001916486.1 TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: cca:CCA00469 4'-phosphopantetheinyl transferase YP_001916487.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: mta:Moth_1653 transcriptional regulator, BadM/Rrf2 family YP_001916488.1 TIGRFAM: cysteine desulfurase NifS; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: chy:CHY_2199 cysteine desulfurase YP_001916489.1 TIGRFAM: FeS cluster assembly scaffold protein NifU; PFAM: nitrogen-fixing NifU domain protein; KEGG: chy:CHY_2198 putative FeS assembly protein YP_001916490.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain protein; KEGG: cth:Cthe_2696 carbohydrate kinase, YjeF related protein YP_001916491.1 PFAM: CBS domain containing protein; KEGG: amt:Amet_4166 CBS domain containing protein YP_001916492.1 KEGG: mma:MM_1024 hypothetical protein YP_001916493.1 KEGG: cno:NT01CX_1264 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein YP_001916494.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: bha:BH0521 hypothetical protein YP_001916495.1 PFAM: PemK family protein; KEGG: amt:Amet_4143 transcriptional modulator of MazE/toxin, MazF YP_001916496.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pat:Patl_2666 pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family YP_001916497.1 PFAM: L-asparaginase II; KEGG: chy:CHY_0780 putative asparaginase YP_001916498.1 PFAM: peptidase M55 D-aminopeptidase; KEGG: aoe:Clos_1006 peptidase M55 D-aminopeptidase YP_001916499.1 PFAM: peptidase M20; peptidase M42 family protein; KEGG: rxy:Rxyl_0252 peptidase M42 YP_001916500.1 KEGG: sfu:Sfum_2480 protein-L-isoaspartate O-methyltransferase; TIGRFAM: protein-L-isoaspartate O-methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_001916501.1 PFAM: ATP-binding region ATPase domain protein; KEGG: amt:Amet_4319 hypothetical protein YP_001916502.1 PFAM: protein of unknown function DUF1576; KEGG: amt:Amet_4320 protein of unknown function DUF1576 YP_001916503.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; protein of unknown function DUF362; KEGG: mac:MA1031 hypothetical protein YP_001916504.1 PFAM: aldo/keto reductase; KEGG: pmo:Pmob_1665 aldo/keto reductase YP_001916505.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: chy:CHY_0155 cold shock protein CspC YP_001916506.1 PFAM: protein of unknown function DUF421; KEGG: csc:Csac_2112 protein of unknown function DUF421 YP_001916507.1 PFAM: regulatory protein TetR; KEGG: amt:Amet_1502 transcriptional regulator, TetR family YP_001916508.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH1003 ABC transporter (ATP-binding protein) YP_001916509.1 KEGG: bha:BH1004 hypothetical protein YP_001916511.1 KEGG: amt:Amet_3446 hypothetical protein YP_001916512.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mae:Maeo_0471 ABC transporter related YP_001916513.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ava:Ava_4039 binding-protein-dependent transport systems inner membrane component YP_001916514.1 KEGG: aoe:Clos_2434 extracellular solute-binding protein family 1 YP_001916515.1 PFAM: regulatory protein LysR; KEGG: wsu:WS0837 hypothetical protein YP_001916516.1 KEGG: swo:Swol_1990 hypothetical protein YP_001916517.1 KEGG: swo:Swol_1953 hypothetical protein YP_001916518.1 PFAM: metalloenzyme domain protein; KEGG: swo:Swol_1989 hypothetical protein YP_001916519.1 KEGG: swo:Swol_1958 hypothetical protein YP_001916520.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: swo:Swol_1952 ABC transporter, ATP-binding protein YP_001916521.1 PFAM: SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: swo:Swol_1951 ABC-type cobalt transport system, ATPase component YP_001916522.1 PFAM: cobalt transport protein; KEGG: swo:Swol_1950 ABC-type cobalt transport system permease component CbiQ and related transporters-like protein YP_001916523.1 PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; Fe-S cluster domain protein; KEGG: tko:TK0934 molybdopterin-guanine dinucleotide biosynthesis protein B YP_001916524.1 KEGG: mth:MTH915 hypothetical protein YP_001916525.1 PFAM: TOBE domain protein; KEGG: mma:MM_0224 molybdenum-pterin-binding-protein YP_001916526.1 PFAM: protein of unknown function DUF1538; KEGG: chy:CHY_1192 hypothetical protein YP_001916527.1 PFAM: protein of unknown function DUF1538; KEGG: chy:CHY_1193 hypothetical protein YP_001916528.1 KEGG: chy:CHY_1194 PII family protein YP_001916529.1 KEGG: chy:CHY_1194 PII family protein YP_001916530.1 PFAM: heat shock protein DnaJ domain protein; KEGG: amt:Amet_0452 heat shock protein DnaJ domain protein YP_001916531.1 KEGG: sth:STH2143 hypothetical protein YP_001916532.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: aeh:Mlg_1916 protein of unknown function DUF6, transmembrane YP_001916533.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: amt:Amet_1196 protein of unknown function DUF6, transmembrane YP_001916534.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cno:NT01CX_1191 ABC transporter, ATP-binding protein YP_001916535.1 KEGG: dsy:DSY2158 hypothetical protein YP_001916536.1 PFAM: polysaccharide deacetylase; KEGG: aoe:Clos_2018 polysaccharide deacetylase YP_001916537.1 KEGG: pyo:PY02999 guanylyl cyclase enzyme Pfam: Guanylate_cyc PROSITE: ASN_RICH LYS_RICH PHE_RICH NLS_BP GUANYLATE_CYCLASE_2 YP_001916539.1 KEGG: mma:MM_0066 hypothetical protein YP_001916540.1 PFAM: TM2 domain containing protein?; KEGG: mmq:MmarC5_1652 TM2 domain containing protein+B7201 YP_001916541.1 KEGG: tva:TVAG_480920 hypothetical protein PROSITE: GLU_RICH LYS_RICH SER_RICH YP_001916542.1 KEGG: gfo:GFO_0887 membrane protein YP_001916543.1 KEGG: cpr:CPR_C0041 probable ATPase of HSP70 class, putative YP_001916546.1 KEGG: lac:LBA0333 hypothetical protein YP_001916547.1 PFAM: SNF2-related protein; helicase domain protein; SMART: DEAD-like helicases; KEGG: cth:Cthe_0521 helicase-like protein YP_001916548.1 KEGG: cth:Cthe_0520 hypothetical protein YP_001916549.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: cth:Cthe_0519 DNA methylase N-4/N-6 YP_001916550.1 PFAM: type III restriction protein res subunit; KEGG: cth:Cthe_0518 type III restriction enzyme, res subunit YP_001916551.1 PFAM: copper amine oxidase domain protein; KEGG: sth:STH1756 hypothetical protein YP_001916553.1 KEGG: ddi:DDBDRAFT_0190160 hypothetical protein YP_001916554.1 KEGG: bcl:ABC2093 hypothetical protein YP_001916556.1 KEGG: pmo:Pmob_1622 hypothetical protein YP_001916557.1 KEGG: drm:Dred_3024 hypothetical protein YP_001916558.1 KEGG: gfo:GFO_2569 hypothetical protein YP_001916559.1 KEGG: pfa:PFF0795w hypothetical protein YP_001916562.1 PFAM: helix-turn-helix domain protein; KEGG: chy:CHY_1862 DNA-binding protein YP_001916566.1 PFAM: integrase family protein; KEGG: ckl:CKL_3621 hypothetical protein YP_001916570.1 PFAM: transposase mutator type; KEGG: gka:GK0877 transposase of IS654-like element YP_001916571.1 PFAM: Integrase catalytic region; KEGG: pth:PTH_2713 hypothetical protein YP_001916574.1 KEGG: drm:Dred_0377 hypothetical protein YP_001916575.1 KEGG: gfo:GFO_2569 hypothetical protein YP_001916576.1 KEGG: bcz:pE33L466_0314 hypothetical protein YP_001916577.1 KEGG: ddi:DDBDRAFT_0167578 hypothetical protein YP_001916578.1 PFAM: Resolvase domain; Recombinase; KEGG: spi:MGAS10750_Spy1717 site-specific recombinase YP_001916579.1 KEGG: aoe:Clos_2018 polysaccharide deacetylase YP_001916580.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: deh:cbdb_A494 PmbA YP_001916581.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: deb:DehaBAV1_0503 peptidase U62, modulator of DNA gyrase YP_001916582.1 KEGG: swo:Swol_0459 hypothetical protein YP_001916583.1 PFAM: protein of unknown function UPF0079; KEGG: mta:Moth_2160 hypothetical protein YP_001916584.1 PFAM: peptidase M22 glycoprotease; KEGG: cno:NT01CX_0503 glycoprotease family protein YP_001916585.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: tte:TTE0537 acetyltransferase YP_001916586.1 KEGG: drm:Dred_2885 putative metalloendopeptidase, glycoprotease family; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease YP_001916587.1 TIGRFAM: UDP-N-acetylmuramate--alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: drm:Dred_0676 UDP-N-acetylmuramate--alanine ligase YP_001916588.1 PFAM: Radical SAM domain protein; KEGG: mta:Moth_1235 radical SAM YP_001916589.1 PFAM: glycosyl transferase group 1; KEGG: tte:TTE0949 predicted glycosyltransferase YP_001916590.1 KEGG: tte:TTE0101 hypothetical protein YP_001916591.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcl:ABC0872 ABC transporter ATP-binding protein YP_001916593.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: gme:Gmet_1043 UBA/ThiF-type NAD/FAD binding fold:MoeZ/MoeB YP_001916594.1 PFAM: MscS Mechanosensitive ion channel; KEGG: amt:Amet_0029 MscS mechanosensitive ion channel YP_001916595.1 TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: mbu:Mbur_0889 2-oxoglutarate ferredoxin oxidoreductase subunit beta YP_001916596.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: amt:Amet_1213 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein YP_001916597.1 KEGG: aoe:Clos_2460 conserved hypothetical protein YP_001916598.1 PFAM: PP-loop domain protein; KEGG: aae:aq_1333 hypothetical protein YP_001916599.1 KEGG: csc:Csac_0103 thiamineS protein YP_001916601.1 KEGG: sfu:Sfum_3308 conserved hypothetical cytosolic protein YP_001916602.1 PFAM: diacylglycerol kinase catalytic region; KEGG: amt:Amet_4787 diacylglycerol kinase, catalytic region YP_001916603.1 KEGG: tte:TTE1590 translation initiation factor eIF-2B alpha subunit; TIGRFAM: translation initiation factor, aIF-2BI family; eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related YP_001916604.1 PFAM: basic membrane lipoprotein; KEGG: oih:OB3388 ABC transporter permease YP_001916605.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bsu:BSU31550 hypothetical protein YP_001916606.1 PFAM: inner-membrane translocator; KEGG: tpt:Tpet_0820 inner-membrane translocator YP_001916607.1 PFAM: inner-membrane translocator; KEGG: sth:STH1233 sugar ABC transporter permease YP_001916608.1 PFAM: major facilitator superfamily MFS_1; KEGG: amt:Amet_4723 major facilitator superfamily MFS_1 YP_001916609.1 PFAM: protein of unknown function DUF161; KEGG: amt:Amet_1088 protein of unknown function DUF161 YP_001916610.1 PFAM: Amidohydrolase 3; KEGG: amt:Amet_3071 amidohydrolase 3 YP_001916611.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: cbh:CLC_0236 pyridine nucleotide-disulphide oxidoreductase family protein YP_001916612.1 PFAM: Formiminotransferase-cyclodeaminase; KEGG: amt:Amet_4589 formiminotransferase-cyclodeaminase YP_001916613.1 KEGG: ava:Ava_4974 TPR repeat YP_001916614.1 PFAM: diacylglycerol kinase catalytic region; KEGG: cpr:CPR_1328 diacylglycerol kinase catalytic domain protein YP_001916615.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: cpy:Cphy_0398 oxidoreductase domain protein YP_001916616.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bcy:Bcer98_0479 amidohydrolase YP_001916617.1 KEGG: csa:Csal_1112 hypothetical protein YP_001916618.1 PFAM: polysaccharide deacetylase; KEGG: amt:Amet_1614 polysaccharide deacetylase YP_001916619.1 TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; Prolyl-tRNA synthetase, class II-like; KEGG: aoe:Clos_0465 prolyl-tRNA synthetase YP_001916620.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: cno:NT01CX_1657 5-formyltetrahydrofolate cyclo-ligase family protein YP_001916621.1 PFAM: Citrate transporter; protein of unknown function DUF401; KEGG: gsu:GSU1012 hypothetical protein YP_001916622.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: tte:TTE2215 MoxR-like ATPase YP_001916623.1 PFAM: protein of unknown function DUF58; KEGG: tte:TTE2214 hypothetical protein YP_001916624.1 PFAM: transglutaminase domain protein; KEGG: aoe:Clos_2651 transglutaminase domain protein YP_001916625.1 PFAM: beta-lactamase domain protein; KEGG: cth:Cthe_3155 beta-lactamase-like protein YP_001916626.1 PFAM: NERD domain protein; KEGG: chy:CHY_1343 putative serine/threonine protein kinase YP_001916627.1 KEGG: csa:Csal_2084 molybdate-binding protein YP_001916628.1 PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: tex:Teth514_2106 asparagine synthase (glutamine-hydrolyzing) YP_001916629.1 KEGG: drm:Dred_2880 hypothetical protein YP_001916630.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: pth:PTH_2617 molybdopterin biosynthesis enzyme YP_001916631.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: drm:Dred_2878 molybdenum cofactor synthesis domain protein YP_001916632.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: hmo:HM1_0061 molybdenum cofactor biosynthesis protein, putative YP_001916633.1 PFAM: chaperonin Cpn10; KEGG: gtn:GTNG_0222 GroES YP_001916634.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: bha:BH0562 chaperonin GroEL YP_001916635.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: dsy:DSY5018 hypothetical protein YP_001916636.1 TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: glutamine amidotransferase class-I; GMP synthase domain protein; ExsB family protein; KEGG: drm:Dred_2375 GMP synthase, large subunit YP_001916637.1 KEGG: aoe:Clos_0536 phosphoribosylaminoimidazole carboxylase, ATPase subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_001916638.1 KEGG: tpt:Tpet_0474 phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_001916639.1 TIGRFAM: adenylosuccinate lyase; PFAM: fumarate lyase; KEGG: bha:BH0625 adenylosuccinate lyase YP_001916640.1 KEGG: sat:SYN_00889 phosphoribosylaminoimidazole synthetase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_001916641.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: chy:CHY_1077 phosphoribosylglycinamide formyltransferase YP_001916642.1 KEGG: oih:OB0749 IMP cyclohydrolase; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: MGS domain protein; AICARFT/IMPCHase bienzyme formylation region YP_001916643.1 KEGG: tex:Teth514_0526 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine--glycine ligase; PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201 YP_001916644.1 TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor; KEGG: chy:CHY_1082 hypothetical protein YP_001916645.1 PFAM: UvrD/REP helicase; KEGG: bpu:BPUM_0625 ATP-dependent DNA helicase YP_001916646.1 KEGG: tte:TTE0605 NAD-dependent DNA ligase (contains BRCT domain type II); TIGRFAM: DNA ligase, NAD-dependent; PFAM: helix-hairpin-helix motif; BRCT domain protein; zinc-finger NAD-dependent DNA ligase C4-type; NAD-dependent DNA ligase OB-fold; NAD-dependent DNA ligase adenylation; SMART: Helix-hairpin-helix DNA-binding class 1; NAD-dependent DNA ligase YP_001916647.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: chy:CHY_1101 glutamyl-tRNA(Gln) amidotransferase, C subunit YP_001916648.1 KEGG: chy:CHY_1102 glutamyl-tRNA(Gln) amidotransferase, A subunit; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase YP_001916649.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB/Yqey domain protein; GatB region; GatB central domain protein; KEGG: tex:Teth514_0541 glutamyl-tRNA(Gln) amidotransferase, B subunit YP_001916650.1 PFAM: Citrate transporter; protein of unknown function DUF401; KEGG: gsu:GSU1012 hypothetical protein YP_001916651.1 TIGRFAM: RNA methyltransferase, TrmA family; PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; KEGG: bha:BH0687 RNA methyltransferase YP_001916652.1 PFAM: NUDIX hydrolase; KEGG: aoe:Clos_1340 NUDIX hydrolase YP_001916653.1 PFAM: protein of unknown function DUF362; KEGG: csc:Csac_1323 protein of unknown function DUF362 YP_001916654.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; FAD dependent oxidoreductase; Thioredoxin domain; KEGG: ppr:PBPRB1551 hypothetical thioredoxin reductase YP_001916655.1 PFAM: Thioredoxin domain; KEGG: cbf:CLI_1345 thioredoxin family protein YP_001916656.1 PFAM: Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits; KEGG: chy:CHY_2391 glycine reductase proprotein GrdE YP_001916657.1 GrdA accepts a carboxymethylselenoether from protein B and transfers it to protein C forming a protein C-bound acetyl-thioester; oxidized GrdA is then reduced by thioredoxin YP_001916658.1 KEGG: chy:CHY_2393 glycine reductase, selenoprotein B; TIGRFAM: glycine reductase, selenoprotein B; selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; PFAM: Selenoprotein B glycine/betaine/sarcosine/D-proline reductase YP_001916659.1 KEGG: cbh:CLC_1301 glycine reductase complex component C, beta subunit YP_001916660.1 PFAM: fatty acid synthesis plsX protein; KEGG: aoe:Clos_0960 glycine reductase YP_001916661.1 PFAM: extracellular solute-binding protein family 5; KEGG: amt:Amet_2915 extracellular solute-binding protein, family 5 YP_001916662.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amt:Amet_2914 binding-protein-dependent transport systems inner membrane component YP_001916663.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amt:Amet_2913 binding-protein-dependent transport systems inner membrane component YP_001916664.1 KEGG: aoe:Clos_1344 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001916665.1 KEGG: aoe:Clos_1345 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001916667.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: chy:CHY_0179 uracil-DNA glycosylase, family 4 YP_001916668.1 PFAM: Peptidoglycan-binding LysM; cell wall hydrolase SleB; KEGG: mta:Moth_0054 cell wall hydrolase, SleB YP_001916669.1 PFAM: protein of unknown function DUF378; KEGG: amt:Amet_2334 protein of unknown function DUF378 YP_001916670.1 KEGG: swo:Swol_1172 hypothetical protein YP_001916671.1 KEGG: aoe:Clos_2452 asparagine synthase (glutamine-hydrolyzing) YP_001916672.1 PFAM: GCN5-related N-acetyltransferase; KEGG: csc:Csac_0988 GCN5-related N-acetyltransferase YP_001916673.1 PFAM: glycoside hydrolase family 18; copper amine oxidase domain protein; SH3 type 3 domain protein; SMART: chitinase II; KEGG: cth:Cthe_2895 glycoside hydrolase, family 18 YP_001916674.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: chy:CHY_1120 ferredoxin YP_001916675.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: amt:Amet_3137 cation diffusion facilitator family transporter YP_001916676.1 KEGG: tte:TTE1769 predicted EndoIII-related endonuclease; TIGRFAM: endonuclease III; PFAM: helix-hairpin-helix motif; HhH-GPD family protein; SMART: iron-sulfur cluster loop YP_001916677.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; domain of unknown function DUF1730; KEGG: bat:BAS0514 iron-sulfur cluster-binding protein, putative YP_001916678.1 TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: tpd:Teth39_2124 electron transport complex, RnfABCDGE type, C subunit YP_001916679.1 TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: tpt:Tpet_0679 electron transport complex, RnfABCDGE type, D subunit YP_001916680.1 TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: amt:Amet_2282 electron transport complex, RnfABCDGE type, G subunit YP_001916681.1 TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: tpd:Teth39_2121 electron transport complex, RnfABCDGE type, E subunit YP_001916682.1 TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: cdf:CD1141 electron transport complex protein YP_001916683.1 TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: amt:Amet_2285 electron transport complex, RnfABCDGE type, B subunit YP_001916684.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: aoe:Clos_1812 molybdenum cofactor biosynthesis protein C YP_001916685.1 PFAM: cation antiporter; KEGG: amt:Amet_4159 cation antiporter YP_001916686.1 PFAM: multiple resistance and pH regulation protein F; KEGG: amt:Amet_4158 multiple resistance and pH regulation protein F YP_001916687.1 TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: amt:Amet_4157 monovalent cation/proton antiporter, MnhG/PhaG subunit YP_001916688.1 KEGG: amt:Amet_4156 putative multicomponent Na+:H+ antiporter subunit B YP_001916689.1 KEGG: amt:Amet_4155 hypothetical protein YP_001916690.1 PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: ctc:CTC01341 sodium/proton antiporter YP_001916691.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: amt:Amet_4153 NADH-ubiquinone oxidoreductase, chain 4L YP_001916692.1 KEGG: amt:Amet_4152 NADH dehydrogenase (quinone); TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I) YP_001916693.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: amt:Amet_4151 NADH dehydrogenase (quinone) YP_001916694.1 PFAM: ApbE family lipoprotein; KEGG: tte:TTE2482 membrane-associated lipoprotein involved in thiamine biosynthesis YP_001916695.1 PFAM: Heptaprenyl diphosphate synthase component I; KEGG: swo:Swol_1955 heptaprenyl diphosphate synthase component I YP_001916696.1 KEGG: tte:TTE0895 hypothetical protein YP_001916697.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: cpr:CPR_2112 maf protein YP_001916698.1 PFAM: DNA repair protein RadC; KEGG: tte:TTE0897 DNA repair proteins YP_001916699.1 functions in MreBCD complex in some organisms YP_001916700.1 TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; KEGG: mta:Moth_0538 rod shape-determining protein MreC YP_001916701.1 KEGG: aoe:Clos_1763 conserved hypothetical protein YP_001916702.1 KEGG: csc:Csac_1869 peptidoglycan glycosyltransferase; TIGRFAM: penicillin-binding protein 2; PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain YP_001916703.1 TIGRFAM: septum site-determining protein MinC; PFAM: Septum formation inhibitor MinC; KEGG: sfu:Sfum_1280 septum site-determining protein MinC YP_001916704.1 TIGRFAM: septum site-determining protein MinD; PFAM: Cobyrinic acid ac-diamide synthase; KEGG: pth:PTH_0822 septum formation inhibitor-activating ATPase YP_001916705.1 TIGRFAM: cell division topological specificity factor MinE; PFAM: Septum formation topological specificity factor MinE; KEGG: sth:STH377 septum site-determining protein YP_001916706.1 TIGRFAM: rod shape-determining protein RodA; PFAM: cell cycle protein; KEGG: tpd:Teth39_1445 rod shape-determining protein RodA YP_001916708.1 PFAM: peptidase M50; KEGG: pth:PTH_0826 Zn-dependent protease YP_001916709.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: tte:TTE0909 Fe-S oxidoreductase family 2 YP_001916710.1 KEGG: drm:Dred_2537 hypothetical protein YP_001916711.1 PFAM: Integrase catalytic region; KEGG: pth:PTH_2713 hypothetical protein YP_001916712.1 PFAM: ribosomal protein L21; KEGG: cth:Cthe_0160 50S ribosomal protein L21 YP_001916713.1 PFAM: protein of unknown function DUF464; KEGG: tte:TTE0914 predicted ribosomal protein YP_001916714.1 involved in the peptidyltransferase reaction during translation YP_001916715.1 KEGG: ppe:PEPE_0083 predicted signal transduction protein with a C-terminal ATPase domain YP_001916716.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Obg/CgtA; PFAM: GTP-binding protein HSR1-related; GTP1/OBG sub domain protein; GTP1/OBG domain protein; KEGG: gka:GK2606 GTPase ObgE YP_001916717.1 KEGG: mta:Moth_0564 nicotinic acid mononucleotide adenyltransferase; TIGRFAM: cytidyltransferase-related domain protein; nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase YP_001916718.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: swo:Swol_1602 metal dependent phosphohydrolase YP_001916719.1 KEGG: tte:TTE0920 transcriptional regulator YP_001916720.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: cth:Cthe_1238 iojap-like protein YP_001916721.1 TIGRFAM: leucyl-tRNA synthetase; KEGG: chy:CHY_0393 leucyl-tRNA synthetase YP_001916722.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sth:STH3100 formate dehydrogenase beta subunit YP_001916723.1 TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: amt:Amet_2280 electron transport complex, RnfABCDGE type, C subunit YP_001916724.1 TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: pdi:BDI_0514 electron transport complex protein RnfD YP_001916725.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: swo:Swol_2107 rRNA methylase (SpoU class) YP_001916726.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: drm:Dred_0754 haloacid dehalogenase domain protein hydrolase YP_001916727.1 PFAM: ferric-uptake regulator; KEGG: chy:CHY_1135 transcriptional regulator, Fur family YP_001916728.1 PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: tte:TTE0267 threonine aldolase YP_001916729.1 KEGG: tva:TVAG_137950 viral A-type inclusion protein, putative Pfam: HOOK GBP_C FliD_C SBP_bac_9 Prefoldin Filament Alpha-2-MRAP_C Myosin_tail_1 Rab5-bind Tropomyosin Pox_A_type_inc SURF6 Apolipoprotein PspA_IM30 HrpB7 Dor1 Baculo_PEP_C MTHFR DUF1110 MIF4G DUF745 Bacillus_HBL YP_001916730.1 PFAM: CBS domain containing protein; DRTGG domain protein; KEGG: gtn:GTNG_2674 thioesterase family protein YP_001916731.1 KEGG: mta:Moth_1874 hypothetical protein YP_001916732.1 KEGG: bld:BLi03073 hypothetical protein YP_001916733.1 KEGG: pth:PTH_2220 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein YP_001916734.1 TIGRFAM: pyruvate kinase; PFAM: PEP-utilising protein mobile region; Pyruvate kinase barrel; Pyruvate kinase alpha/beta; KEGG: aoe:Clos_0586 pyruvate kinase YP_001916735.1 PFAM: thioesterase superfamily protein; KEGG: tte:TTE1814 predicted thioesterase YP_001916736.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: amt:Amet_4063 FxsA cytoplasmic membrane protein YP_001916737.1 KEGG: bha:BH3511 hypothetical protein YP_001916738.1 KEGG: pth:PTH_1985 phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: phosphatidylserine decarboxylase-related YP_001916739.1 PFAM: Radical SAM domain protein; KEGG: tte:TTE1776 predicted Fe-S oxidoreductase YP_001916740.1 KEGG: mac:MA3586 transcriptional regulator, TetR family YP_001916741.1 amylomaltase; acts to release glucose from maltodextrins YP_001916742.1 KEGG: gtn:GTNG_2778 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_001916743.1 TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: glycosyl transferase group 1; Starch synthase catalytic domain protein; KEGG: amt:Amet_2946 glycogen/starch synthase, ADP-glucose type YP_001916744.1 KEGG: cno:NT01CX_0724 glucose-1-phosphate adenylyltransferase, GlgD subunit YP_001916745.1 TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; KEGG: bcy:Bcer98_3503 glucose-1-phosphate adenylyltransferase YP_001916746.1 KEGG: drm:Dred_1453 1,4-alpha-glucan branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain YP_001916747.1 PFAM: zinc/iron permease; KEGG: amt:Amet_4265 zinc/iron permease YP_001916748.1 PFAM: aldo/keto reductase; KEGG: amr:AM1_4001 oxidoreductase, aldo/keto reductase family protein YP_001916749.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ctc:CTC01168 acetyltransferase YP_001916750.1 PFAM: protein of unknown function DUF159; KEGG: bld:BLi00631 YoqW YP_001916751.1 PFAM: beta-lactamase domain protein; KEGG: cch:Cag_0125 hydroxyacylglutathione hydrolase, putative YP_001916752.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dsy:DSY1441 hypothetical protein YP_001916753.1 KEGG: aoe:Clos_2453 conserved hypothetical protein YP_001916754.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; protein of unknown function DUF362; KEGG: mac:MA1031 hypothetical protein YP_001916755.1 KEGG: drm:Dred_1358 conserved hypothetical radical SAM protein; TIGRFAM: conserved hypothetical radical SAM protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001916756.1 KEGG: oih:OB1209 hypothetical protein YP_001916757.1 KEGG: amt:Amet_1200 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_001916758.1 PFAM: nitroreductase; KEGG: deb:DehaBAV1_0617 nitroreductase YP_001916759.1 PFAM: aldo/keto reductase; KEGG: amr:AM1_4001 oxidoreductase, aldo/keto reductase family protein YP_001916760.1 PFAM: heat shock protein Hsp20; KEGG: gsu:GSU0538 heat shock protein, HSP20 family YP_001916761.1 PFAM: protein of unknown function DUF123; KEGG: mst:Msp_1119 hypothetical protein YP_001916762.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: vvy:VV2073 predicted hydrolase YP_001916763.1 PFAM: Abortive infection protein; KEGG: cth:Cthe_2176 abortive infection protein YP_001916765.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: drm:Dred_0365 dihydrolipoamide dehydrogenase YP_001916766.1 PFAM: Rubrerythrin; KEGG: aoe:Clos_0687 rubrerythrin YP_001916767.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: swo:Swol_1977 hypothetical protein YP_001916768.1 KEGG: gme:Gmet_2635 heat shock protein HSP20 YP_001916769.1 PFAM: nitroreductase; KEGG: pab:PAB0163 NADH oxidase (NoxC) YP_001916770.1 KEGG: oih:OB0187 hypothetical protein YP_001916772.1 PFAM: ABC-2 type transporter; KEGG: fre:Franean1_5082 ABC-2 type transporter YP_001916774.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO2061 ABC transport ATP-binding subunit YP_001916775.1 KEGG: ter:Tery_1776 methyltransferase type 12 YP_001916776.1 PFAM: conserved hypothetical protein; KEGG: dsy:DSY4928 hypothetical protein YP_001916778.1 PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: cpe:CPE1401 probable DNA polymerase III epsilon chain YP_001916779.1 KEGG: mta:Moth_1616 hypothetical protein YP_001916780.1 KEGG: cpr:CPR_2044 putative sporulation protein YtaF YP_001916781.1 PFAM: VanW family protein; KEGG: amt:Amet_1426 VanW family protein YP_001916783.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: amt:Amet_3467 choline/carnitine/betaine transporter YP_001916785.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: pth:PTH_1838 hypothetical membrane protein YP_001916786.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: bcz:pE33L466_0136 spore germination protein YP_001916787.1 PFAM: GerA spore germination protein; KEGG: gka:GK1624 spore germination protein YP_001916788.1 PFAM: glucose-inhibited division protein A; KEGG: drm:Dred_1583 glucose-inhibited division protein A YP_001916789.1 PFAM: isochorismatase hydrolase; KEGG: iho:Igni_1207 isochorismatase hydrolase YP_001916790.1 KEGG: cbf:CLI_0240 hypothetical protein YP_001916791.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: mem:Memar_0160 choline/carnitine/betaine transporter YP_001916792.1 PFAM: UspA domain protein; KEGG: mem:Memar_0161 UspA domain protein YP_001916793.1 PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: gtn:GTNG_0209 S1 RNA binding domain protein YP_001916794.1 KEGG: mxa:MXAN_6120 hypothetical protein YP_001916795.1 KEGG: stp:Strop_0367 hypothetical protein YP_001916796.1 KEGG: ctc:CTC02397 N-acyl-L-amino acid amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001916797.1 KEGG: chy:CHY_0551 hypothetical protein YP_001916798.1 PFAM: metallophosphoesterase; KEGG: drm:Dred_1478 hypothetical protein YP_001916799.1 KEGG: drm:Dred_1477 hypothetical protein YP_001916800.1 KEGG: cno:NT01CX_0663 hypothetical protein YP_001916801.1 KEGG: pat:Patl_2975 lipase, putative YP_001916802.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ctc:CTC00152 putative amidohydrolase YP_001916803.1 KEGG: tva:TVAG_090230 hypothetical protein Pfam: DUF1162 YP_001916804.1 KEGG: chy:CHY_1753 hypothetical protein YP_001916805.1 PFAM: regulatory protein TetR; KEGG: btl:BALH_0942 transcriptional regulator, TetR family YP_001916806.1 KEGG: oih:OB0315 hypothetical protein YP_001916807.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: swo:Swol_1977 hypothetical protein YP_001916809.1 PFAM: protein of unknown function DUF1130; KEGG: cyb:CYB_0386 hypothetical protein YP_001916810.1 TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: tte:TTE1497 thiamine pyrophosphokinase YP_001916811.1 PFAM: protein of unknown function DUF129; KEGG: mma:MM_0437 hypothetical protein YP_001916812.1 TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: bca:BCE_0308 aspartate racemase YP_001916813.1 PFAM: aminotransferase class IV; KEGG: noc:Noc_2631 D-alanine transaminase YP_001916814.1 PFAM: biotin/lipoyl attachment domain-containing protein; pyruvate carboxyltransferase; Conserved carboxylase region; KEGG: mja:MJ1231 pyruvate carboxylase subunit B YP_001916816.1 KEGG: pth:PTH_2836 hypothetical protein YP_001916817.1 PFAM: CheC domain protein; KEGG: cth:Cthe_2308 CheC-like protein YP_001916818.1 TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein; KEGG: cth:Cthe_2307 hemerythrin-like metal-binding protein YP_001916819.1 PFAM: Acetamidase/Formamidase; KEGG: bwe:BcerKBAB4_2541 acetamidase/formamidase YP_001916820.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: mta:Moth_0829 hypothetical protein YP_001916821.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: cno:NT01CX_1068 cardiolipin synthetase YP_001916822.1 catalyzes the formation of pyruvate from 2,3-diaminopropionate YP_001916823.1 PFAM: protein of unknown function DUF265; KEGG: tma:TM0036 hypothetical protein YP_001916824.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: tpd:Teth39_1576 phosphodiesterase, MJ0936 family YP_001916825.1 KEGG: cpy:Cphy_3813 hypothetical protein YP_001916826.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: aoe:Clos_1096 molybdopterin oxidoreductase YP_001916827.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: amt:Amet_0991 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001916828.1 PFAM: cytoplasmic chaperone TorD family protein; KEGG: amt:Amet_0992 cytoplasmic chaperone TorD family protein YP_001916829.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II; MoeA domain protein domain IV; KEGG: sth:STH3201 molybdenum cofactor biosynthesis protein YP_001916830.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: amt:Amet_0993 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001916831.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: dsy:DSY4129 hypothetical protein YP_001916832.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: cau:Caur_0021 ATP-binding region ATPase domain protein YP_001916833.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: cau:Caur_0020 phosphonate ABC transporter, periplasmic phosphonate-binding protein YP_001916834.1 TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: aoe:Clos_0273 FMN-binding domain protein YP_001916835.1 KEGG: pgi:PG0307 SoxR-reducing system protein RsxE YP_001916837.1 PFAM: cobalamin B12-binding domain protein; KEGG: sfu:Sfum_3258 cobalamin B12-binding domain protein YP_001916838.1 PFAM: CBS domain containing protein; KEGG: aoe:Clos_2010 putative signal-transduction protein with CBS domains YP_001916839.1 KEGG: mmz:MmarC7_0121 tetratricopeptide TPR_2 repeat protein YP_001916840.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: cbh:CLC_1409 zinc carboxypeptidase family protein YP_001916841.1 KEGG: amr:AM1_0080 hypothetical protein YP_001916843.1 Heat shock-induced YP_001916844.1 KEGG: bay:RBAM_013230 YkrI YP_001916845.1 KEGG: mpe:MYPE6470 DNA topoisomerase IV subunit A YP_001916847.1 PFAM: conserved hypothetical protein; copper amine oxidase domain protein; KEGG: hmo:HM1_1636 hypothetical protein YP_001916848.1 PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: amt:Amet_1491 protein of unknown function DUF405 YP_001916850.1 PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: tpd:Teth39_0140 homoserine dehydrogenase YP_001916851.1 KEGG: pca:Pcar_1903 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region YP_001916852.1 PFAM: cobalamin B12-binding domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: tma:TM1537 Mg-protoporphyrin IX monomethyl ester oxidative cyclase-related protein YP_001916853.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ckl:CKL_0779 ProX YP_001916854.1 KEGG: aba:Acid345_3662 adenosylhomocysteinase; TIGRFAM: adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase; TrkA-N domain protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; Acetohydroxy acid isomeroreductase catalytic domain protein; S-adenosyl-L-homocysteine hydrolase, NAD binding YP_001916855.1 PFAM: Integrase catalytic region; KEGG: tpd:Teth39_0240 integrase, catalytic region YP_001916856.1 PFAM: S-adenosylmethionine synthetase; KEGG: tpd:Teth39_1790 methionine adenosyltransferase YP_001916857.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; KEGG: hha:Hhal_1677 methyltransferase type 11 YP_001916858.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: hha:Hhal_1678 methyltransferase type 12 YP_001916859.1 PFAM: deoxynucleoside kinase; KEGG: cpr:CPR_0070 deoxynucleoside kinase family protein YP_001916860.1 KEGG: tde:TDE0120 hypothetical protein YP_001916861.1 KEGG: pmo:Pmob_1791 vitamin B12 dependent methionine synthase, activation region YP_001916862.1 PFAM: methylenetetrahydrofolate reductase; KEGG: drm:Dred_2192 5,10-methylenetetrahydrofolate reductase YP_001916863.1 PFAM: dihydropteroate synthase DHPS; homocysteine S-methyltransferase; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: pmo:Pmob_1792 homocysteine S-methyltransferase YP_001916864.1 KEGG: mmo:MMOB5130 expressed protein YP_001916865.1 PFAM: protein of unknown function DUF205; KEGG: mta:Moth_1321 protein of unknown function DUF205 YP_001916866.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: cbh:CLC_1684 hypothetical protein YP_001916867.1 PFAM: major facilitator superfamily MFS_1; KEGG: mac:MA0181 multidrug-efflux transporter YP_001916868.1 KEGG: amt:Amet_0105 hypothetical protein YP_001916869.1 KEGG: amt:Amet_0927 FAD dependent dehydrogenase YP_001916870.1 PFAM: Peptidoglycan-binding LysM; KEGG: mta:Moth_1271 peptidoglycan-binding LysM YP_001916872.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: fre:Franean1_6933 two component transcriptional regulator, LuxR family YP_001916873.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: amt:Amet_3232 integral membrane sensor signal transduction histidine kinase YP_001916874.1 PFAM: beta-lactamase domain protein; flavodoxin/nitric oxide synthase; KEGG: pmo:Pmob_1132 beta-lactamase domain protein YP_001916875.1 KEGG: amt:Amet_3429 hypothetical protein YP_001916876.1 KEGG: tex:Teth514_2028 hypothetical protein YP_001916877.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pth:PTH_2468 retron-type reverse transcriptase YP_001916878.1 PFAM: sodium:neurotransmitter symporter; KEGG: amt:Amet_0315 sodium:neurotransmitter symporter YP_001916879.1 PFAM: protein of unknown function DUF1294; KEGG: ctc:CTC01157 phosphoesterase YP_001916880.1 KEGG: dsy:DSY0932 hypothetical protein YP_001916881.1 KEGG: tet:TTHERM_00321740 Kinesin motor domain containing protein Pfam: Kinesin PspA_IM30 Mod_r Prefoldin_2 Vicilin_N DUF536 Myosin_tail_1 Apolipoprotein Filament Rab5-bind CHASE3 Baculo_PEP_C VAR1 eRF1_1 Hep_59 Herpes_UL14 DUF848 PROSITE: ASN_RICH GLN_RICH GLU_RICH KINESIN_MOTOR_DOMAIN2 YP_001916882.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: chy:CHY_0731 Fe-hydrogenase, gamma subunit YP_001916883.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: chy:CHY_0732 Fe-hydrogenase, beta subunit YP_001916884.1 TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: chy:CHY_0733 NAD-dependent formate dehydrogenase, alpha subunit, selenocysteine-containing YP_001916885.1 KEGG: amt:Amet_4160 hypothetical protein YP_001916886.1 KEGG: amt:Amet_4161 hypothetical protein YP_001916887.1 KEGG: chy:CHY_0470 methylglyoxal synthase; TIGRFAM: methylglyoxal synthase; PFAM: MGS domain protein YP_001916890.1 KEGG: dsy:DSY3705 3-methyladenine DNA glycosylase; TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG) YP_001916891.1 PFAM: protein of unknown function DUF421; KEGG: pth:PTH_0849 predicted membrane protein YP_001916892.1 KEGG: cno:NT01CX_0821 hypothetical protein YP_001916893.1 KEGG: pha:PSHAa2436 hypothetical protein YP_001916894.1 PFAM: transposase IS3/IS911 family protein; KEGG: bcy:Bcer98_2284 transposase IS3/IS911 family protein YP_001916896.1 PFAM: proteinase inhibitor I4 serpin; KEGG: amt:Amet_2165 proteinase inhibitor I4, serpin YP_001916898.1 KEGG: gme:Gmet_2647 NADPH-dependent FMN reductase YP_001916899.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate YP_001916901.1 PFAM: beta-lactamase; KEGG: ckl:CKL_0345 predicted peptidoglycan biosynthesis protein YP_001916903.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cth:Cthe_1433 short-chain dehydrogenase/reductase SDR YP_001916904.1 KEGG: amt:Amet_1352 CapA domain protein YP_001916905.1 PFAM: Rieske [2Fe-2S] domain protein; FAD dependent oxidoreductase; KEGG: cth:Cthe_1461 FAD dependent oxidoreductase YP_001916906.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KWG Leptospira repeat protein; copper amine oxidase domain protein; KEGG: amt:Amet_1855 KWG Leptospira repeat protein YP_001916907.1 KEGG: amt:Amet_4149 hypothetical protein YP_001916908.1 KEGG: amt:Amet_1325 hypothetical protein YP_001916909.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: amt:Amet_1324 ABC transporter related YP_001916910.1 PFAM: regulatory protein GntR HTH; KEGG: amt:Amet_1323 regulatory protein GntR, HTH YP_001916911.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: ctc:CTC00590 superoxide dismutase (Cu-Zn) YP_001916913.1 PFAM: Methionine sulfoxide reductase A; KEGG: aoe:Clos_1947 peptide methionine sulfoxide reductase YP_001916914.1 PFAM: Na+/H+ antiporter NhaC; KEGG: amt:Amet_4617 Na+/H+ antiporter NhaC YP_001916915.1 PFAM: Integrase catalytic region; KEGG: pth:PTH_2713 hypothetical protein YP_001916916.1 KEGG: mvn:Mevan_1192 hypothetical protein YP_001916917.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: pth:PTH_1013 membrane carboxypeptidase YP_001916918.1 PFAM: helix-turn-helix domain protein; KEGG: spd:SPD_1253 transcriptional repressor, putative YP_001916919.1 KEGG: tet:TTHERM_00170190 hypothetical protein Pfam: Myosin_tail_1 Prefoldin_2 Sds3 XPA_C PROSITE: ASN_RICH GLN_RICH GLU_RICH YP_001916920.1 KEGG: cbf:CLI_3226 hypothetical protein YP_001916921.1 PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: ssa:SSA_1664 phosphatidylethanolamine N-methyltransferase, putative YP_001916922.1 PFAM: helix-turn-helix domain protein; KEGG: mbu:Mbur_1719 transcriptional regulator, XRE family YP_001916923.1 KEGG: bcz:pE33L466_0428 hypothetical protein YP_001916924.1 PFAM: protein of unknown function DUF405; KEGG: amt:Amet_1560 protein of unknown function DUF418 YP_001916925.1 PFAM: regulatory protein LuxR; response regulator receiver; KEGG: amt:Amet_1559 two component transcriptional regulator, LuxR family YP_001916926.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: amt:Amet_1557 two-component sensor histidine kinase YP_001916927.1 KEGG: cau:Caur_0681 hypothetical protein YP_001916928.1 PFAM: regulatory protein TetR; KEGG: sme:SMb20367 putative transcriptional regulator protein YP_001916929.1 PFAM: pyruvate phosphate dikinase PEP/pyruvate-binding; PEP-utilising protein mobile region; KEGG: amt:Amet_1914 pyruvate phosphate dikinase, PEP/pyruvate-binding YP_001916930.1 TIGRFAM: redox-active disulfide protein 2; KEGG: pth:PTH_0650 hypothetical protein YP_001916931.1 PFAM: permease; KEGG: tex:Teth514_2072 permease YP_001916932.1 PFAM: regulatory protein ArsR; KEGG: mta:Moth_2209 transcriptional regulator, ArsR family YP_001916933.1 PFAM: regulatory protein ArsR; KEGG: cac:CA_P0103 transcriptional regulator HTH-type, ArsR family YP_001916934.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: cya:CYA_1717 transporter, arsenical resistance-3 (ACR3) family YP_001916935.1 KEGG: ckl:CKL_1066 hypothetical protein YP_001916936.1 PFAM: transposase IS3/IS911 family protein; KEGG: bcy:Bcer98_2284 transposase IS3/IS911 family protein YP_001916937.1 KEGG: amt:Amet_4221 hypothetical protein YP_001916938.1 PFAM: transposase IS3/IS911 family protein; KEGG: bcy:Bcer98_2284 transposase IS3/IS911 family protein YP_001916939.1 PFAM: transposase IS3/IS911 family protein; KEGG: bcy:Bcer98_2284 transposase IS3/IS911 family protein YP_001916940.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: cdf:CD2087 putative xanthine dehydrogenase YP_001916941.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: drm:Dred_2773 (2Fe-2S)-binding domain protein YP_001916942.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: pmo:Pmob_1738 molybdopterin dehydrogenase FAD-binding YP_001916943.1 PFAM: nucleoside recognition domain protein; KEGG: oih:OB3031 hypothetical protein YP_001916944.1 PFAM: Na+/solute symporter; KEGG: csa:Csal_1068 Na+/solute symporter YP_001916946.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: ckl:CKL_0344 predicted NADH oxidase YP_001916947.1 KEGG: amt:Amet_1655 hypothetical protein YP_001916948.1 KEGG: amt:Amet_2150 hypothetical protein YP_001916949.1 KEGG: amt:Amet_2151 hypothetical protein YP_001916950.1 KEGG: chy:CHY_1718 MukB N-terminal domain/M protein repeat protein YP_001916951.1 KEGG: amt:Amet_2153 hypothetical protein YP_001916952.1 PFAM: sigma-54 factor interaction domain-containing protein; ATPase associated with various cellular activities AAA_5; SMART: PAS domain containing protein; AAA ATPase; KEGG: cdf:CD2700 putative sigma54-interacting regulatory protein YP_001916953.1 PFAM: nucleoside recognition domain protein; KEGG: ppr:PBPRA2581 hypothetical protein YP_001916954.1 PFAM: nucleoside recognition domain protein; KEGG: vvy:VVA1373 hypothetical protein YP_001916955.1 TIGRFAM: isoaspartyl dipeptidase; PFAM: amidohydrolase; KEGG: bha:BH1129 isoaspartyl dipeptidase YP_001916956.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: cdf:CD2697 putative amidohydrolase YP_001916958.1 KEGG: swo:Swol_2483 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region YP_001916959.1 TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; KEGG: mmw:Mmwyl1_0187 diguanylate cyclase with PAS/PAC sensor YP_001916961.1 KEGG: amt:Amet_1703 hypothetical protein YP_001916963.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: btl:BALH_0839 possible 5-methylcytosine-specific restriction related enzyme YP_001916964.1 KEGG: tex:Teth514_1825 hypothetical protein YP_001916965.1 KEGG: rru:Rru_A2714 hypothetical protein YP_001916966.1 KEGG: gka:GK1389 hypothetical protein YP_001916967.1 PFAM: restriction modification system DNA specificity domain; N-6 DNA methylase; KEGG: cpf:CPF_2599 type I restriction-modification system, M subunit YP_001916970.1 PFAM: N-6 DNA methylase; KEGG: mba:Mbar_A1016 type I restriction-modification system methyltransferase subunit YP_001916971.1 PFAM: restriction modification system DNA specificity domain; KEGG: gka:GK2905 type I restriction-modification system specificity determinant YP_001916972.1 PFAM: type III restriction protein res subunit; protein of unknown function DUF450; SMART: DEAD-like helicases; KEGG: tbd:Tbd_2685 DEAD/DEAH box helicase YP_001916974.1 PFAM: transposase IS3/IS911 family protein; KEGG: bcy:Bcer98_2284 transposase IS3/IS911 family protein YP_001916975.1 KEGG: pyo:PY04214 hypothetical protein Pfam: Tropomyosin Filament VAR1 TPR_MLP1_2 ATG16 DUF593 DUF1154 GBP_C DUF1103 PROSITE: ASN_RICH ASP_RICH GLU_RICH LYS_RICH YP_001916976.1 KEGG: sru:SRU_1540 hypothetical protein YP_001916977.1 PFAM: HNH endonuclease; KEGG: mbu:Mbur_0266 glycosyl transferase, group 1 YP_001916979.1 PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: ter:Tery_3583 ATPase associated with various cellular activities, AAA_5 YP_001916980.1 KEGG: ter:Tery_3582 McrBC 5-methylcytosine restriction system component-like YP_001916981.1 KEGG: maq:Maqu_2985 hypothetical protein YP_001916983.1 KEGG: ckl:CKL_1765 conserved hypothetical protein with LexA domain; TIGRFAM: LexA repressor; PFAM: UvrD/REP helicase; protein of unknown function DUF450; peptidase S24 and S26 domain protein YP_001916984.1 PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: cpr:CPR_2122 protein of unknown function DUF262 family YP_001916985.1 KEGG: pho:PH1229 N-glycosylase/DNA lyase YP_001916986.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: swo:Swol_1977 hypothetical protein YP_001916987.1 KEGG: cte:CT1967 hypothetical protein YP_001916988.1 KEGG: bcl:ABC0654 hypothetical protein YP_001916989.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: sth:STH2316 GntR family transcriptional regulator YP_001916993.1 KEGG: cdf:CD0939 hypothetical protein YP_001916994.1 KEGG: cdf:CD2926 hypothetical protein YP_001916995.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: dsy:DSY1158 hypothetical protein YP_001916996.1 PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase; KEGG: mla:Mlab_1258 hypothetical protein YP_001916997.1 PFAM: Stage V sporulation protein S; KEGG: cac:CAC1817 stage V sporulation protein, SpoVS YP_001916998.1 PFAM: Radical SAM domain protein; KEGG: pab:PAB0648 tungsten-containing aldehyde ferredoxin oxidoreductase cofactor modifying protein YP_001916999.1 PFAM: thiamineS protein; KEGG: dde:Dde_2458 hypothetical protein YP_001917000.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: ppd:Ppro_0465 aldehyde ferredoxin oxidoreductase YP_001917001.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: mta:Moth_1446 2-hydroxyglutaryl-CoA dehydratase, D-component YP_001917002.1 TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: pth:PTH_0568 activator of 2-hydroxyglutaryl-CoA dehydratase YP_001917003.1 KEGG: cbf:CLI_2637 hypothetical protein YP_001917004.1 TIGRFAM: C_GCAxxG_C_C family protein; KEGG: cbh:CLC_0809 hypothetical protein YP_001917005.1 PFAM: beta-lactamase domain protein; KEGG: dol:Dole_2556 beta-lactamase domain protein YP_001917007.1 KEGG: ckl:CKL_3747 hypothetical protein YP_001917008.1 KEGG: amt:Amet_1655 hypothetical protein YP_001917009.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; hydrogenase large subunit domain protein; KEGG: cpe:CPE2575 probable hydrogenase YP_001917010.1 KEGG: amt:Amet_4065 hypothetical protein YP_001917011.1 PFAM: Stage II sporulation E family protein; KEGG: amt:Amet_4066 stage II sporulation E family protein YP_001917012.1 KEGG: amt:Amet_4067 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; hydrogenase large subunit domain protein; Fe-S cluster domain protein; SMART: PAS domain containing protein YP_001917013.1 KEGG: sru:SRU_1807 hypothetical protein YP_001917014.1 PFAM: UvrD/REP helicase; KEGG: sru:SRU_1806 probable ATP-dependent DNA helicase YP_001917015.1 KEGG: amt:Amet_1870 hypothetical protein YP_001917016.1 PFAM: regulatory protein MarR; KEGG: ctc:CTC00126 transcriptional regulator, marR family YP_001917017.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: ckl:CKL_0108 AccB YP_001917018.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: ctc:CTC00134 acetyl-CoA carboxylase YP_001917019.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: carboxyl transferase; acetyl-CoA carboxylase alpha subunit; KEGG: ctc:CTC00135 acetyl-coA carboxylase carboxyl transferase subunit beta/alpha YP_001917020.1 KEGG: rno:689517 hypothetical protein LOC689517 YP_001917021.1 KEGG: nfa:nfa3760 hypothetical protein YP_001917022.1 PFAM: NERD domain protein; KEGG: chy:CHY_1343 putative serine/threonine protein kinase YP_001917023.1 KEGG: pca:Pcar_0371 hypothetical protein YP_001917024.1 PFAM: protein of unknown function DUF1540; KEGG: hmo:HM1_1551 hypothetical protein YP_001917025.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcz:BCZK3210 major facilitator family transporter YP_001917026.1 PFAM: SAICAR synthetase; KEGG: swo:Swol_1209 phosphoribosylaminoimidazolesuccinocarboxamide synthase YP_001917027.1 KEGG: amt:Amet_2363 membrane spanning protein YP_001917028.1 PFAM: protein of unknown function DUF1212; KEGG: amt:Amet_2364 protein of unknown function DUF1212 YP_001917029.1 molecular chaperone YP_001917031.1 KEGG: amt:Amet_1870 hypothetical protein YP_001917032.1 PFAM: cell wall hydrolase/autolysin; KEGG: drm:Dred_2693 N-acetylmuramoyl-L-alanine amidase YP_001917033.1 KEGG: amt:Amet_1177 carbon-monoxide dehydrogenase, catalytic subunit; TIGRFAM: carbon-monoxide dehydrogenase, catalytic subunit; PFAM: Prismane YP_001917034.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; KEGG: aoe:Clos_1566 HI0933 family protein YP_001917035.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: sso:SSO1665 cytosine permease (CodB) YP_001917037.1 PFAM: protein of unknown function DUF917; KEGG: tpd:Teth39_2164 protein of unknown function DUF917 YP_001917038.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: drm:Dred_1547 hydantoinase/oxoprolinase YP_001917039.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: dsy:DSY1227 hypothetical protein YP_001917040.1 PFAM: protein of unknown function DUF606; KEGG: amt:Amet_3111 protein of unknown function DUF606 YP_001917041.1 KEGG: bha:BH3697 alkaline amylopullulanase; TIGRFAM: pullulanase, extracellular; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_001917043.1 TIGRFAM: YidE/YbjL duplication; PFAM: TrkA-C domain protein; YidE/YbjL duplication domain protein; KEGG: bfr:BF2680 putative transport protein YP_001917044.1 PFAM: glycerate kinase; KEGG: cbe:Cbei_4479 glycerate kinase YP_001917045.1 PFAM: SNARE associated Golgi protein; KEGG: cpr:CPR_1585 uncharacterized conserved protein, YdjX/UPF0043 family YP_001917046.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: pth:PTH_1839 hypothetical membrane protein YP_001917047.1 KEGG: tte:TTE2377 hypothetical protein YP_001917048.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: dsy:DSY4477 hypothetical protein YP_001917049.1 PFAM: GerA spore germination protein; KEGG: dsy:DSY4476 hypothetical protein YP_001917051.1 KEGG: cpr:CPR_1376 hypothetical protein YP_001917052.1 KEGG: hma:rrnAC1868 hypothetical protein YP_001917053.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: mtp:Mthe_1261 flavodoxin/nitric oxide synthase YP_001917054.1 KEGG: ctc:CTC01793 transcriptional regulator YP_001917055.1 PFAM: protein of unknown function UPF0261; KEGG: hma:rrnB0188 hypothetical protein YP_001917056.1 KEGG: mba:Mbar_A0523 hypothetical protein YP_001917057.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; hydrogenase large subunit domain protein; KEGG: hmo:HM1_2613 ferredoxin (4fe-4s) domain, putative iron-only hydrogenase YP_001917058.1 KEGG: bcl:ABC3295 hypothetical protein; PFAM: cell wall hydrolase/autolysin; SH3 type 3 domain protein; SMART: SH3 domain protein YP_001917059.1 PFAM: Pyruvoyl-dependent arginine decarboxylase; KEGG: swo:Swol_0667 pyruvoyl-dependent arginine decarboxylase YP_001917060.1 KEGG: tte:TTE2365 hypothetical protein YP_001917061.1 PFAM: transposase mutator type; KEGG: cbe:Cbei_0672 transposase, mutator type YP_001917062.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: csa:Csal_2457 substrate-binding region of ABC-type glycine betaine transport system YP_001917063.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: dsy:DSY1755 potassium transporter peripheral membrane component YP_001917064.1 PFAM: sodium/hydrogen exchanger; KEGG: aae:aq_2030 Na(+)/H(+) antiporter YP_001917065.1 KEGG: pfa:PFE0980c hypothetical protein YP_001917066.1 PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: tte:TTE1591 threonine dehydrogenase and related Zn-dependent dehydrogenase YP_001917068.1 KEGG: amt:Amet_1004 superfamily I DNA helicase YP_001917069.1 PFAM: metallophosphoesterase; KEGG: cth:Cthe_2411 metallophosphoesterase YP_001917070.1 KEGG: cpe:CPE2159 hypothetical protein YP_001917072.1 KEGG: rsh:Rsph17029_0081 hypothetical protein YP_001917073.1 PFAM: TrkA-N domain protein; Ion transport 2 domain protein; KEGG: oih:OB3278 potassium channel protein YP_001917074.1 PFAM: Lytic transglycosylase catalytic; copper amine oxidase domain protein; KEGG: cth:Cthe_1374 copper amine oxidase-like protein YP_001917075.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: bcy:Bcer98_0234 DEAD/DEAH box helicase domain protein YP_001917076.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: bcy:Bcer98_1648 DegV family protein YP_001917077.1 PFAM: Radical SAM domain protein; KEGG: mma:MM_2581 pyruvate formate-lyase activating enzyme-like protein YP_001917078.1 PFAM: Spermine synthase; KEGG: sfu:Sfum_1994 spermidine synthase YP_001917079.1 PFAM: cytochrome c-type biogenesis protein CcmB; ABC-2 type transporter; KEGG: mac:MA2109 multidrug ABC transporter, permease protein YP_001917080.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mac:MA2110 multidrug ABC transporter, ATP-binding protein YP_001917081.1 PFAM: protein of unknown function UPF0182; KEGG: pth:PTH_1387 hypothetical protein YP_001917082.1 TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: chy:CHY_1911 threonine synthase YP_001917083.1 TIGRFAM: homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: hmo:HM1_1938 homoserine kinase YP_001917084.1 PFAM: phospholipase D/Transphosphatidylase; KEGG: cno:NT01CX_1068 cardiolipin synthetase YP_001917085.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: tpd:Teth39_0646 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_001917086.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: amt:Amet_3238 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001917088.1 KEGG: hau:Haur_4209 hypothetical protein YP_001917089.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: chy:CHY_2047 DNA-binding response regulator YP_001917090.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: dsy:DSY0847 hypothetical protein YP_001917091.1 KEGG: ath:AT5G24880 unknown protein YP_001917092.1 KEGG: csc:Csac_0859 hypothetical protein YP_001917093.1 KEGG: bcl:ABC3490 hypothetical protein YP_001917094.1 PFAM: Na+/H+ antiporter NhaC; KEGG: vpa:VP0618 hypothetical protein YP_001917095.1 TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: drm:Dred_0278 argininosuccinate lyase YP_001917096.1 PFAM: argininosuccinate synthase; KEGG: dsy:DSY0785 argininosuccinate synthase YP_001917097.1 KEGG: drm:Dred_1283 hypothetical protein YP_001917098.1 PFAM: helix-hairpin-helix motif; Radical SAM domain protein; SMART: Helix-hairpin-helix DNA-binding class 1; KEGG: drm:Dred_1282 radical SAM domain protein YP_001917099.1 TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: gtn:GTNG_1685 cobalamin biosynthesis protein CbiA YP_001917100.1 PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: hmo:HM1_2394 precorrin-8x methylmutase CbiC/cobh putative YP_001917101.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: pth:PTH_0957 precorrin isomerase YP_001917102.1 PFAM: SNARE associated Golgi protein; KEGG: hha:Hhal_1919 hypothetical protein YP_001917103.1 TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; KEGG: tex:Teth514_0309 cobalamin biosynthesis protein CbiD YP_001917104.1 TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: pth:PTH_0952 precorrin-6B methylase 1,2 YP_001917105.1 TIGRFAM: precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: hmo:HM1_2388 precorrin-2 C20-methyltransferase, cbil putative YP_001917106.1 KEGG: mja:MJ1578 cobalamin biosynthesis precorrin-3 methylase (CbiF); TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_001917107.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiG protein; KEGG: drm:Dred_2710 cobalamin (vitamin B12) biosynthesis CbiG protein YP_001917108.1 TIGRFAM: precorrin-3B C17-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: hmo:HM1_2391 precorrin-3b C17-methyltransferase, cbih YP_001917109.1 TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK; KEGG: amt:Amet_0077 precorrin-6x reductase YP_001917110.1 PFAM: cobalbumin biosynthesis protein; KEGG: cno:NT01CX_2078 cobinamide kinase YP_001917111.1 KEGG: mta:Moth_0191 hypothetical protein YP_001917112.1 KEGG: dsy:DSY2725 hypothetical protein YP_001917113.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: tex:Teth514_1931 cobalamin biosynthesis protein CobD YP_001917114.1 TIGRFAM: cobalamin 5'-phosphate synthase; PFAM: cobalamin-5-phosphate synthase CobS; KEGG: mta:Moth_1102 cobalamin 5'-phosphate synthase YP_001917115.1 KEGG: mta:Moth_1103 GHMP kinase YP_001917116.1 PFAM: aminotransferase class I and II; KEGG: gme:Gmet_0487 L-threonine-O-3-phosphate decarboxylase YP_001917117.1 TIGRFAM: cobyric acid synthase CobQ; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: dsy:DSY4062 cobyric acid synthase YP_001917118.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: baf:BAPKO_0538 hypothetical protein YP_001917119.1 KEGG: aba:Acid345_3608 adenine phosphoribosyltransferase; TIGRFAM: adenine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_001917120.1 KEGG: syf:Synpcc7942_1605 hypothetical protein YP_001917121.1 PFAM: CBS domain containing protein; KEGG: cbf:CLI_1207 CBS domain protein YP_001917122.1 KEGG: cac:CAC0222 exodeoxyribonuclease (exoA); TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase YP_001917123.1 PFAM: polysaccharide deacetylase; KEGG: hmo:HM1_0945 polysaccharide deacetylase, putative YP_001917124.1 KEGG: mta:Moth_1764 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_001917125.1 PFAM: Rhomboid family protein; KEGG: drm:Dred_2900 rhomboid family protein YP_001917126.1 PFAM: protein of unknown function DUF456; KEGG: dsy:DSY1414 hypothetical protein YP_001917128.1 PFAM: cyclase family protein; KEGG: tte:TTE2628 uncharacterized ACR, predicted metal-dependent hydrolase YP_001917129.1 KEGG: bcl:ABC0654 hypothetical protein YP_001917130.1 PFAM: copper amine oxidase domain protein; SCP-like extracellular; KEGG: cth:Cthe_0779 copper amine oxidase-like protein YP_001917131.1 PFAM: protein of unknown function DUF255; KEGG: cth:Cthe_0291 protein of unknown function DUF255 YP_001917132.1 TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: bcy:Bcer98_0872 asparagine synthase (glutamine-hydrolyzing) YP_001917133.1 KEGG: bpu:BPUM_2685 asparagine synthase (glutamine-hydrolyzing); TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: glutamine amidotransferase class-II; asparagine synthase YP_001917134.1 KEGG: hmo:HM1_2353 glutamine synthetase, type I; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_001917135.1 PFAM: ANTAR domain protein; KEGG: pth:PTH_0727 response regulator YP_001917136.1 PFAM: transcriptional regulator PadR family protein; KEGG: mta:Moth_2223 transcriptional regulator, PadR-like family YP_001917138.1 PFAM: permease; KEGG: amt:Amet_1834 permease YP_001917139.1 PFAM: protein of unknown function UPF0182; KEGG: amt:Amet_0022 protein of unknown function UPF0182 YP_001917140.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: tte:TTE2131 NADH:flavin oxidoreductase, Old Yellow enzyme family YP_001917141.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: cbe:Cbei_2111 protein tyrosine phosphatase YP_001917142.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: chy:CHY_0895 radical SAM domain protein YP_001917143.1 PFAM: protein of unknown function DUF1028; KEGG: rxy:Rxyl_0871 protein of unknown function DUF1028 YP_001917144.1 KEGG: dsy:DSY1737 hypothetical protein YP_001917146.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: aoe:Clos_1057 prolipoprotein diacylglyceryl transferase YP_001917147.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pth:PTH_2468 retron-type reverse transcriptase YP_001917148.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: swo:Swol_1977 hypothetical protein YP_001917149.1 catalyzes the reduction of hydroxylamine to ammonia and water YP_001917150.1 PFAM: FMN-binding domain protein; KEGG: aoe:Clos_1773 electron transport complex, RnfABCDGE type, G subunit YP_001917151.1 TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: amt:Amet_4624 phosphate binding protein YP_001917152.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mbu:Mbur_0751 phosphate ABC transporter, inner membrane subunit PstC YP_001917153.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hmo:HM1_2084 phosphate ABC transporter, permease protein PstA YP_001917154.1 KEGG: oih:OB3133 phosphate ABC transporter ATP-binding protein; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_001917155.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: amt:Amet_4620 phosphate uptake regulator, PhoU YP_001917156.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: swo:Swol_0951 response regulator receiver protein YP_001917157.1 KEGG: amt:Amet_2865 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001917158.1 KEGG: pca:Pcar_2840 hypothetical protein YP_001917159.1 PFAM: ABC-2 type transporter; KEGG: tko:TK0726 ABC-type multidrug transport system, permease component YP_001917160.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mem:Memar_0021 daunorubicin resistance ABC transporter ATPase subunit YP_001917161.1 PFAM: regulatory protein ArsR; Helix-turn-helix type 11 domain protein; KEGG: pth:PTH_0545 predicted transcriptional regulator YP_001917162.1 PFAM: carbon starvation protein CstA; KEGG: tex:Teth514_0909 carbon starvation protein CstA YP_001917163.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cth:Cthe_2306 MATE efflux family protein YP_001917164.1 KEGG: cdf:CD3402 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: FAD linked oxidase domain protein; UDP-N-acetylenolpyruvoylglucosamine reductase domain protein YP_001917165.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bcl:ABC3027 deacylase YP_001917166.1 PFAM: histone deacetylase superfamily; KEGG: swo:Swol_2171 deacetylase family protrein YP_001917167.1 TIGRFAM: small GTP-binding protein; GTP-binding protein TypA; PFAM: elongation factor G domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; KEGG: tex:Teth514_2150 GTP-binding protein TypA YP_001917168.1 PFAM: regulatory protein GntR HTH; KEGG: rba:RB1862 transcription regulator GntR related protein YtrA YP_001917169.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ctc:CTC01985 ABC transporter ATP-binding protein YP_001917170.1 KEGG: swo:Swol_2242 putative ABC-2 type transport system permease protein YP_001917171.1 PFAM: protein of unknown function DUF74; KEGG: swo:Swol_2241 hypothetical protein YP_001917172.1 PFAM: PspC domain protein; KEGG: bpu:BPUM_3143 possible bacteriophage shock protein C YP_001917174.1 PFAM: metallophosphoesterase; KEGG: cac:CAC0640 predicted phoshohydrolase YP_001917175.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: amt:Amet_3467 choline/carnitine/betaine transporter YP_001917176.1 TIGRFAM: isoaspartyl dipeptidase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: cbf:CLI_3617 isoaspartyl dipeptidase YP_001917177.1 PFAM: C4-dicarboxylate anaerobic carrier; KEGG: fnu:FN0023 hypothetical protein YP_001917178.1 PFAM: sigma-54 factor interaction domain-containing protein; Ribonuclease R winged-helix domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase; KEGG: cdf:CD2863 putative sigma-54-dependent transcriptional regulator YP_001917179.1 PFAM: Phosphoglycerate mutase; KEGG: gtn:GTNG_1326 phosphoglycerate mutase YP_001917180.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: amt:Amet_0582 methyl-accepting chemotaxis sensory transducer YP_001917181.1 PFAM: LrgA family protein; KEGG: mba:Mbar_A3200 hypothetical protein YP_001917182.1 PFAM: LrgB family protein; KEGG: cbe:Cbei_5006 LrgB family protein YP_001917183.1 KEGG: mgm:Mmc1_3605 MJ0042 family finger-like protein YP_001917184.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmo:Pmob_0278 ABC transporter related YP_001917185.1 PFAM: beta-lactamase; KEGG: mma:MM_3157 putative 6-aminohexanoate-dimer hydrolase YP_001917186.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: det:DET0526 PmbA/TldD family protein YP_001917187.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: det:DET0527 TldD/PmbA family protein YP_001917188.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: aoe:Clos_2019 substrate-binding region of ABC-type glycine betaine transport system YP_001917189.1 PFAM: protein of unknown function DUF849; KEGG: ssp:SSP0448 hypothetical protein YP_001917190.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: bcz:pE33L466_0384 3-hydroxyacyl-CoA dehydrogenase YP_001917191.1 KEGG: bcy:Bcer98_0769 hypothetical protein YP_001917192.1 PFAM: copper amine oxidase domain protein; KEGG: ppd:Ppro_1307 allergen V5/TPX-1 family protein YP_001917193.1 PFAM: transposase IS200-family protein; KEGG: csc:Csac_2649 transposase IS200-family protein YP_001917194.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: cbe:Cbei_2731 NADH:flavin oxidoreductase/NADH oxidase YP_001917195.1 KEGG: cac:CA_P0121 Leu-rich protein family protein, YaeG (E.coli) homolog YP_001917196.1 KEGG: aoe:Clos_2763 hypothetical protein YP_001917197.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: aoe:Clos_2764 RNA polymerase, sigma-24 subunit, ECF subfamily YP_001917198.1 PFAM: integrase family protein; KEGG: amt:Amet_1405 phage integrase family protein YP_001917199.1 PFAM: HEPN domain protein; KEGG: tpd:Teth39_0511 HEPN domain protein YP_001917200.1 PFAM: DNA polymerase beta domain protein region; KEGG: gur:Gura_0236 DNA polymerase, beta domain protein region YP_001917201.1 KEGG: cbe:Cbei_2051 hypothetical protein YP_001917202.1 KEGG: cbe:Cbei_2052 hypothetical protein YP_001917203.1 PFAM: helix-turn-helix domain protein; KEGG: amt:Amet_3370 putative transcriptional regulator, XRE family YP_001917204.1 PFAM: protein of unknown function DUF891; KEGG: amt:Amet_3369 protein of unknown function DUF891 YP_001917206.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: cbe:Cbei_2804 transposase IS116/IS110/IS902 family protein YP_001917208.1 PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_0900 DNA polymerase, beta domain protein region YP_001917209.1 PFAM: protein of unknown function DUF86; KEGG: dsy:DSY2810 hypothetical protein YP_001917210.1 KEGG: rrs:RoseRS_2275 hypothetical protein YP_001917212.1 KEGG: gka:GK1812 hypothetical protein YP_001917213.1 KEGG: amt:Amet_2134 hypothetical protein YP_001917214.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cbh:CLC_0542 methlytransferase-like protein YP_001917215.1 PFAM: Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits; KEGG: tte:TTE1879 GrdE proprotein YP_001917216.1 KEGG: drm:Dred_2357 S-layer domain protein YP_001917217.1 KEGG: ckl:CKL_2080 hypothetical protein YP_001917218.1 KEGG: cdf:CD2391 hypothetical protein YP_001917220.1 PFAM: Abortive infection protein; KEGG: tde:TDE1871 hypothetical protein YP_001917223.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: rba:RB1885 probable menaquinone biosynthesis methlytransferase related protein YP_001917224.1 KEGG: oih:OB0924 hypothetical protein YP_001917228.1 KEGG: bwe:BcerKBAB4_1178 hypothetical protein YP_001917230.1 PFAM: pentapeptide repeat protein; KEGG: btl:BALH_1637 hypothetical protein YP_001917231.1 PFAM: adenylate cyclase; KEGG: spu:586260 similar to conserved hypothetical protein YP_001917232.1 PFAM: leucine-rich repeat protein; KEGG: ckl:CKL_0406 predicted surface-layer protein YP_001917234.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pca:Pcar_1387 acetyltransferase YP_001917235.1 PFAM: aldo/keto reductase; KEGG: fjo:Fjoh_0168 aldo/keto reductase YP_001917236.1 KEGG: dsy:DSY4223 hypothetical protein YP_001917237.1 PFAM: Integrase catalytic region; KEGG: tex:Teth514_0755 integrase, catalytic region YP_001917239.1 PFAM: DNA polymerase beta domain protein region; KEGG: jan:Jann_1547 DNA polymerase, beta-like YP_001917240.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: sfr:Sfri_3957 amidohydrolase 3 YP_001917243.1 KEGG: mta:Moth_0065 hypothetical protein YP_001917244.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: cdf:CD2842 nitrilase (carbon-nitrogen hydrolase) YP_001917245.1 PFAM: Excinuclease ABC C subunit domain protein; KEGG: cno:NT01CX_2293 endo/excinuclease domain protein YP_001917246.1 KEGG: amt:Amet_3739 hypothetical protein YP_001917247.1 PFAM: manganese and iron superoxide dismutase; KEGG: cbh:CLC_2204 Mn/Fe superoxide dismutase YP_001917248.1 PFAM: branched-chain amino acid transport system II carrier protein; KEGG: cno:NT01CX_2428 branched-chain amino acid transport system II carrier protein YP_001917249.1 KEGG: mta:Moth_0517 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; copper amine oxidase domain protein; SH3 type 3 domain protein; SMART: SH3 domain protein YP_001917250.1 KEGG: pfa:PFL0050c hypothetical protein YP_001917251.1 PFAM: transposase mutator type; KEGG: cbe:Cbei_0672 transposase, mutator type YP_001917252.1 KEGG: rno:690456 hypothetical protein LOC690456 YP_001917253.1 TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: tex:Teth514_0079 electron transport complex, RnfABCDGE type, C subunit YP_001917254.1 TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: tle:Tlet_0287 electron transport complex, RnfABCDGE type, D subunit YP_001917255.1 TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; PFAM: FMN-binding domain protein; KEGG: aoe:Clos_0273 FMN-binding domain protein YP_001917256.1 TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: tex:Teth514_0082 electron transport complex, RnfABCDGE type, E subunit YP_001917257.1 TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; PFAM: RnfA-Nqr electron transport subunit; KEGG: amt:Amet_2284 electron transport complex, RnfABCDGE type, A subunit YP_001917258.1 TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Fe-S cluster domain protein; KEGG: amt:Amet_2285 electron transport complex, RnfABCDGE type, B subunit YP_001917259.1 KEGG: cbf:CLI_1275 hypothetical protein YP_001917260.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cbh:CLC_1235 pyruvate ferredoxin oxidoreductase YP_001917261.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: sth:STH226 uracil permease YP_001917262.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: aeh:Mlg_0734 response regulator receiver protein YP_001917263.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: tte:TTE2478 cysteine synthase YP_001917264.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: amt:Amet_3501 UBA/ThiF-type NAD/FAD binding protein YP_001917265.1 PFAM: Mov34/MPN/PAD-1 family protein; KEGG: amt:Amet_3500 Mov34/MPN/PAD-1 family protein YP_001917266.1 PFAM: SirA family protein; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; nitrite and sulphite reductase 4Fe-4S region; KEGG: amt:Amet_3499 sulfite reductase (ferredoxin) YP_001917267.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: gme:Gmet_2933 ThiS, thiamine-biosynthesis YP_001917268.1 PFAM: conserved hypothetical protein; KEGG: ter:Tery_0334 conserved hypothetical protein 698 YP_001917269.1 TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; KEGG: bsu:BSU33510 hypothetical protein YP_001917270.1 PFAM: AIR synthase related protein domain protein; KEGG: swo:Swol_2175 phosphoribosylformylglycinamidine synthase YP_001917271.1 KEGG: aae:aq_1180 S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; Acetohydroxy acid isomeroreductase catalytic domain protein; S-adenosyl-L-homocysteine hydrolase, NAD binding YP_001917272.1 TIGRFAM: trigger factor; PFAM: peptidylprolyl isomerase FKBP-type; trigger factor domain protein; trigger factor domain; KEGG: bcl:ABC2637 trigger factor YP_001917273.1 KEGG: swo:Swol_1656 endopeptidase Clp; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: peptidase S14 ClpP YP_001917274.1 KEGG: dsy:DSY3204 ATP-dependent protease ATP-binding subunit; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: AAA ATPase central domain protein; zinc finger C4 domain protein; ATPase AAA-2 domain protein; SMART: AAA ATPase YP_001917275.1 KEGG: pth:PTH_0806 predicted ATP-dependent protease; TIGRFAM: ATP-dependent protease LonB; PFAM: magnesium chelatase ChlI subunit; AAA ATPase central domain protein; peptidase S16 lon domain protein; SMART: AAA ATPase YP_001917276.1 PFAM: GTP-binding protein HSR1-related; KEGG: oih:OB2075 GTPase EngB YP_001917277.1 SMART: helicase c2; KEGG: dps:DP1744 similar to ATP-dependent helicase YP_001917278.1 KEGG: amt:Amet_0749 hypothetical protein YP_001917279.1 PFAM: Rubrerythrin; KEGG: amt:Amet_0750 rubrerythrin YP_001917280.1 TIGRFAM: valyl-tRNA synthetase; KEGG: mta:Moth_0532 valyl-tRNA synthetase YP_001917281.1 TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; KEGG: bca:BCE_4548 folylpolyglutamate synthase YP_001917282.1 PFAM: integrase family protein; KEGG: sru:SRU_p0011 site-specific recombinase, phage integrase family, truncation YP_001917283.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: pth:PTH_2396 transposase and inactivated derivatives YP_001917284.1 KEGG: tte:TTE0926 DNA uptake protein and related DNA-binding proteins; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1 YP_001917285.1 TIGRFAM: selenocysteine-specific translation elongation factor; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 2; Elongation factor SelB winged helix 3; KEGG: mta:Moth_2503 selenocysteine-specific translation elongation factor YP_001917287.1 TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: hmo:HM1_2508 selenide, water dikinase YP_001917288.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cbh:CLC_2822 glycerophosphoryl diester phosphodiesterase family protein YP_001917289.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bld:BLi00323 hypothetical protein YP_001917290.1 PFAM: ResB family protein; KEGG: mta:Moth_2199 ResB-like YP_001917291.1 TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: aoe:Clos_2365 cytochrome c assembly protein YP_001917292.1 TIGRFAM: glutamyl-tRNA reductase; PFAM: Shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like; KEGG: bsu:BSU28170 glutamyl-tRNA reductase YP_001917293.1 PFAM: cytochrome c assembly protein; KEGG: gsu:GSU3283 cytochrome c biogenesis protein, CcmF/CcyK/CcsA family YP_001917294.1 TIGRFAM: siroheme synthase; KEGG: mta:Moth_1251 siroheme synthase, N-terminal domain YP_001917295.1 KEGG: gsu:GSU3285 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase YP_001917296.1 TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Uroporphyrinogen III synthase HEM4; KEGG: hmo:HM1_1966 uroporphyrinogen III synthase/methyltransferase YP_001917297.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: pth:PTH_0974 predicted Fe-S oxidoreductases YP_001917298.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate YP_001917299.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: chy:CHY_1211 radical SAM domain protein YP_001917300.1 SMART: regulatory protein AsnC/Lrp family; KEGG: hmo:HM1_1970 transcriptional regulator, putative YP_001917301.1 KEGG: amt:Amet_0049 putative transcriptional regulator, AsnC family YP_001917302.1 TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: bsu:BSU28120 glutamate-1-semialdehyde aminotransferase YP_001917303.1 PFAM: phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: mta:Moth_0221 phosphoglucomutase YP_001917305.1 KEGG: ctc:CTC01843 anaerobic nitric oxide reductase flavorubredoxin YP_001917306.1 PFAM: sodium/hydrogen exchanger; KEGG: amt:Amet_4777 sodium/hydrogen exchanger YP_001917307.1 KEGG: amt:Amet_4778 hypothetical protein YP_001917308.1 PFAM: protein of unknown function UPF0016; KEGG: ckl:CKL_3423 hypothetical protein YP_001917309.1 PFAM: ferric-uptake regulator; KEGG: cbf:CLI_2623 transcriptional regulator, Fur family YP_001917310.1 PFAM: conserved hypothetical protein; KEGG: amt:Amet_1586 conserved hypothetical protein 245 YP_001917311.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: amt:Amet_1587 ABC transporter related YP_001917312.1 PFAM: transcriptional regulator PadR family protein; KEGG: aoe:Clos_1270 transcriptional regulator, PadR-like family YP_001917313.1 PFAM: protein of unknown function DUF1445; KEGG: psa:PST_2764 hypothetical protein YP_001917314.1 PFAM: LamB/YcsF family protein; KEGG: tte:TTE1608 hypothetical protein YP_001917315.1 PFAM: natural resistance-associated macrophage protein; KEGG: nph:NP2956A NRAMP-family transporter YP_001917316.1 PFAM: Allophanate hydrolase subunit 1; KEGG: amt:Amet_2974 allophanate hydrolase subunit 1 YP_001917317.1 KEGG: tte:TTE1606 allophanate hydrolase subunit 2; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2 YP_001917318.1 TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: dsy:DSY3930 hypothetical protein YP_001917319.1 Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline YP_001917320.1 KEGG: sme:SMa0937 hypothetical protein YP_001917321.1 TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: bsu:BSU40340 ornithine--oxo-acid transaminase YP_001917322.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: amt:Amet_1305 radical SAM domain protein YP_001917323.1 PFAM: protein of unknown function UPF0236; KEGG: pth:PTH_2245 hypothetical protein YP_001917325.1 PFAM: transposase IS4 family protein; KEGG: bca:BCE_2458 transposase, IS4 family YP_001917326.1 PFAM: peptidase M20; protease-associated PA domain protein; peptidase M28; KEGG: bsu:BSU38470 hypothetical protein YP_001917327.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: cbh:CLC_2449 sodium:alanine symporter family protein YP_001917329.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: amt:Amet_4667 2-nitropropane dioxygenase, NPD YP_001917330.1 PFAM: peptidase M20; KEGG: gtn:GTNG_2272 Xaa-Pro aminopeptidase YP_001917331.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; Aluminium resistance family protein; KEGG: cko:CKO_04984 hypothetical protein YP_001917332.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: amt:Amet_1193 transcriptional regulator IclR-like protein YP_001917333.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; L-seryl-tRNA selenium transferase; KEGG: cbf:CLI_3030 L-seryl-tRNA selenium transferase YP_001917334.1 PFAM: OsmC family protein; KEGG: aha:AHA_0982 chain A, structural genomics YP_001917335.1 PFAM: UbiA prenyltransferase; KEGG: tpt:Tpet_1264 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_001917336.1 KEGG: amt:Amet_2366 sigma54 specific transcriptional regulator, Fis family; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; PAS fold-4 domain protein; SMART: PAS domain containing protein; AAA ATPase YP_001917337.1 PFAM: dihydrodipicolinate reductase; KEGG: tpd:Teth39_1040 dihydrodipicolinate reductase YP_001917338.1 KEGG: tme:Tmel_0906 hypothetical protein YP_001917339.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: tme:Tmel_0907 pyridoxal-5'-phosphate-dependent enzyme, beta subunit YP_001917340.1 KEGG: aoe:Clos_1696 D-ornithine aminomutase S component YP_001917341.1 PFAM: cobalamin B12-binding domain protein; D-Lysine 56-aminomutase alpha subunit; KEGG: tex:Teth514_1481 cobalamin B12-binding domain protein YP_001917342.1 KEGG: aoe:Clos_1694 putative component of D-ornithine aminomutase YP_001917343.1 PFAM: ribonuclease H; KEGG: mta:Moth_0619 ribonuclease H YP_001917344.1 TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; PFAM: beta-lactamase domain protein; ComEC/Rec2-related protein; KEGG: cth:Cthe_0606 DNA internalization-related competence protein ComEC/Rec2 YP_001917345.1 PFAM: Domain of unkown function DUF1786 putative pyruvate format-lyase activating enzyme; KEGG: mta:Moth_0877 pyruvate formate-lyase activating enzyme YP_001917346.1 TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: pth:PTH_0867 DNA polymerase III, delta subunit YP_001917347.1 PFAM: ribosomal protein S20; KEGG: chy:CHY_0406 30S ribosomal protein S20 YP_001917348.1 Initiates the rapid degradation of small, acid-soluble proteins during spore germination YP_001917349.1 TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein; KEGG: swo:Swol_1586 hypothetical protein YP_001917350.1 binds to the ribosome on the universally-conserved alpha-sarcin loop YP_001917351.1 KEGG: cdf:CD2464 oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001917352.1 TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; KEGG: pth:PTH_0875 transcriptional regulator of heat shock gene YP_001917353.1 PFAM: GrpE protein; KEGG: dsy:DSY3131 hypothetical protein YP_001917354.1 KEGG: aoe:Clos_1233 chaperone protein DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70 YP_001917355.1 TIGRFAM: chaperone protein DnaJ; PFAM: DnaJ central domain protein; heat shock protein DnaJ domain protein; chaperone DnaJ domain protein; KEGG: mta:Moth_0586 chaperone DnaJ YP_001917356.1 TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: methyltransferase small; ribosomal L11 methyltransferase; KEGG: aoe:Clos_1235 ribosomal protein L11 methyltransferase YP_001917357.1 PFAM: protein of unknown function DUF558; KEGG: cth:Cthe_1319 protein of unknown function DUF558 YP_001917358.1 KEGG: chy:CHY_0419 MiaB-like tRNA modifying enzyme; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB YP_001917361.1 PFAM: histidine triad (HIT) protein; KEGG: tte:TTE0963 diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase YP_001917362.1 PFAM: ribosomal protein S21; KEGG: cbe:Cbei_2674 ribosomal protein S21 YP_001917363.1 KEGG: hmo:HM1_2443 GatB/YqeY domain protein YP_001917364.1 PFAM: peptidase S14 ClpP; protein of unknown function DUF107; KEGG: bha:BH1356 hypothetical protein YP_001917365.1 KEGG: tpd:Teth39_1136 protein of unknown function DUF1432 YP_001917366.1 KEGG: dre:321113 zgc:65851 YP_001917367.1 TIGRFAM: sporulation protein YqfC; PFAM: protein of unknown function DUF1429; KEGG: drm:Dred_2486 protein of unknown function DUF1429 YP_001917368.1 TIGRFAM: sporulation protein YqfD; PFAM: putative stage IV sporulation YqfD; KEGG: amt:Amet_3034 putative stage IV sporulation YqfD YP_001917369.1 PFAM: PhoH family protein; KEGG: tte:TTE0970 phosphate starvation-inducible protein PhoH, predicted ATPase YP_001917370.1 KEGG: pth:PTH_0891 predicted membrane-associated HD superfamily hydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; metal-dependent phosphohydrolase 7TM intracellular region; metal-dependent phosphohydrolase 7TM extracellular region; SMART: metal-dependent phosphohydrolase HD region YP_001917371.1 PFAM: protein of unknown function UPF0054; KEGG: rrs:RoseRS_3596 protein of unknown function UPF0054 YP_001917372.1 PFAM: diacylglycerol kinase; KEGG: tpd:Teth39_1366 diacylglycerol kinase YP_001917373.1 PFAM: protein of unknown function DUF502; KEGG: mta:Moth_0597 protein of unknown function DUF502 YP_001917374.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: lin:lin1500 similar to cytidine deaminase YP_001917375.1 PFAM: alanine racemase domain protein; KEGG: cbf:CLI_2040 alanine racemase, N-terminal domain protein YP_001917376.1 TIGRFAM: small GTP-binding protein; GTP-binding protein Era; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; Miro domain protein; KEGG: bha:BH1367 GTP-binding protein (Era/ThdF family) YP_001917377.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: dsy:DSY3103 hypothetical protein YP_001917378.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA YP_001917379.1 KEGG: cdf:CD2432 glycyl-tRNA synthetase beta chain; TIGRFAM: glycyl-tRNA synthetase, beta subunit YP_001917380.1 PFAM: CBS domain containing protein; regulatory protein DeoR; Helix-turn-helix type 11 domain protein; KEGG: tpd:Teth39_1360 transcriptional regulator with CBS sensor domain, DeoR family YP_001917381.1 PFAM: protein of unknown function DUF299; KEGG: drm:Dred_2470 protein of unknown function DUF299 YP_001917382.1 catalyzes the formation of phosphoenolpyruvate from pyruvate YP_001917383.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: cth:Cthe_0272 serine-type D-Ala-D-Ala carboxypeptidase YP_001917384.1 dGTPase family type 2 subfamily; presumably hydrolyzes dGTP to deoxyguanosine and triphosphate YP_001917385.1 KEGG: bha:BH1375 DNA primase; TIGRFAM: DNA primase; PFAM: zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase catalytic core domain; SMART: Toprim sub domain protein YP_001917386.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 1.1 domain protein; sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; sigma-70 region 1.2; KEGG: gka:GK2482 RNA polymerase sigma factor RpoD YP_001917387.1 PFAM: protein of unknown function DUF633; KEGG: tex:Teth514_1316 protein of unknown function DUF633 YP_001917388.1 PFAM: protein of unknown function DUF34; KEGG: tpd:Teth39_0741 protein of unknown function DUF34 YP_001917389.1 PFAM: protein of unknown function DUF164; KEGG: aae:aq_1223 hypothetical protein YP_001917390.1 KEGG: tte:TTE0779 hypothetical protein YP_001917391.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: csc:Csac_2003 two component transcriptional regulator, winged helix family YP_001917392.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: tpd:Teth39_0165 integral membrane sensor signal transduction histidine kinase YP_001917393.1 PFAM: protein of unknown function UPF0047; KEGG: chy:CHY_0907 conserved hypothetical protein TIGR00149 YP_001917394.1 PFAM: Radical SAM domain protein; KEGG: sat:SYN_01173 radical SAM superfamily protein YP_001917395.1 PFAM: tRNA methyltransferase complex GCD14 subunit; KEGG: tpd:Teth39_1806 tRNA(1-methyladenosine) methyltransferase and related methyltransferase-like protein YP_001917396.1 TIGRFAM: twin-arginine translocation protein, TatA/E family subunit; PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: amt:Amet_0994 twin-arginine translocation protein, TatA/E family subunit YP_001917397.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: chy:CHY_0863 sec-independent protein translocase protein TatC YP_001917398.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: swo:Swol_1316 integrase/recombinase YP_001917399.1 PFAM: portal protein SPP1; KEGG: bcy:Bcer98_1293 phage portal protein SPP1 YP_001917400.1 KEGG: swo:Swol_1305 hypothetical protein YP_001917401.1 KEGG: drm:Dred_2125 Ig domain protein, group 2 domain protein YP_001917402.1 KEGG: tva:TVAG_030630 viral A-type inclusion protein, putative Pfam: Myosin_tail_1 DUF1690 OHCU_decarbox Phe_tRNA-synt_N EzrA HalX DUF827 TBPIP Microtub_assoc DUF465 PspA_IM30 FlaC_arch TPR_MLP1_2 HALZ Vicilin_N Tropomyosin Prefoldin_2 Nnf1 ATG16 GRIP PROSITE: ASN_RICH GLU_RICH LYS_RICH YP_001917403.1 KEGG: pth:PTH_2204 hypothetical protein YP_001917405.1 KEGG: drm:Dred_0380 hypothetical protein YP_001917406.1 KEGG: drm:Dred_2135 hypothetical protein YP_001917407.1 KEGG: bcy:Bcer98_1286 hypothetical protein YP_001917408.1 KEGG: pyo:PY06328 hypothetical protein Pfam: AP2 PROSITE: ASN_RICH LYS_RICH NLS_BP YP_001917409.1 KEGG: bcy:Bcer98_0991 hypothetical protein YP_001917411.1 KEGG: cpr:CPR_2126 hypothetical protein YP_001917413.1 KEGG: mxa:MXAN_1454 hypothetical protein YP_001917414.1 KEGG: drm:Dred_2130 hypothetical protein YP_001917416.1 KEGG: drm:Dred_2129 hypothetical protein YP_001917417.1 PFAM: Appr-1-p processing domain protein; KEGG: ilo:IL0105 predicted phosphatase YP_001917418.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: amt:Amet_3094 NADH dehydrogenase (ubiquinone), 24 kDa subunit YP_001917419.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: tko:TK1613 NADH:ubiquinone oxidoreductase, NADH-binding subunit F YP_001917420.1 PFAM: ferredoxin; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase Fe4S4 region; KEGG: csc:Csac_0621 molybdopterin oxidoreductase YP_001917421.1 catalyzes the hydrolysis of pyrophosphate to phosphate YP_001917422.1 KEGG: bwe:BcerKBAB4_2010 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase YP_001917423.1 KEGG: ctc:CTC01351 hypothetical protein YP_001917424.1 KEGG: mta:Moth_0157 hypothetical protein YP_001917425.1 PFAM: Polyprenyl synthetase; KEGG: swo:Swol_0968 polyprenyl synthetase YP_001917426.1 PFAM: putative small multi-drug export; KEGG: bha:BH1234 small multidrug export related protein YP_001917427.1 KEGG: bcy:Bcer98_0338 hypothetical protein YP_001917428.1 PFAM: glucose-inhibited division protein A; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: hmo:HM1_2741 glucose inhibited division protein A YP_001917429.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: amt:Amet_1179 methyltransferase type 12 YP_001917430.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: amt:Amet_1224 rubredoxin-type Fe(Cys)4 protein YP_001917431.1 PFAM: protein of unknown function DUF503; KEGG: drm:Dred_1275 protein of unknown function DUF503 YP_001917432.1 KEGG: tte:TTE1741 hypothetical protein YP_001917433.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: cth:Cthe_1948 cytochrome c biogenesis protein, transmembrane region YP_001917434.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: aoe:Clos_2716 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_001917435.1 KEGG: aoe:Clos_1095 formate dehydrogenase family accessory protein FdhD YP_001917436.1 KEGG: aoe:Clos_0570 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; SMART: Elongator protein 3/MiaB/NifB YP_001917437.1 PFAM: MOSC domain containing protein; KEGG: pca:Pcar_1967 hypothetical protein YP_001917438.1 TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: molybdopterin-guanine dinucleotide biosynthesis MobB region; KEGG: amt:Amet_0997 molybdopterin-guanine dinucleotide biosynthesis protein B YP_001917439.1 KEGG: chy:CHY_0570 LAO/AO transport system ATPase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase YP_001917440.1 PFAM: Positive regulator of sigma(E) RseC/MucC; KEGG: amt:Amet_2362 positive regulator of sigma E, RseC/MucC YP_001917441.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: drm:Dred_2925 protein of unknown function DUF6, transmembrane YP_001917442.1 PFAM: protein of unknown function DUF156; KEGG: bpu:BPUM_3023 hypothetical protein YP_001917443.1 PFAM: aminotransferase class I and II; KEGG: chy:CHY_1492 aspartate aminotransferase YP_001917444.1 KEGG: mta:Moth_1066 aspartate-semialdehyde dehydrogenase, USG-1 related; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase NAD - binding; Semialdehyde dehydrogenase dimerisation region YP_001917445.1 KEGG: drm:Dred_1174 hypothetical protein YP_001917446.1 PFAM: LmbE family protein; KEGG: drm:Dred_2324 LmbE family protein YP_001917447.1 PFAM: glycosyl transferase group 1; KEGG: hmo:HM1_2041 glycosyl transferase, group 1 family protein, putative YP_001917448.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: cbf:CLI_1260 rrf2 family protein YP_001917449.1 KEGG: tpd:Teth39_0207 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding YP_001917450.1 PFAM: prolipoprotein diacylglyceryl transferase; KEGG: amt:Amet_2890 prolipoprotein diacylglyceryl transferase YP_001917451.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis YP_001917452.1 PFAM: 3-dehydroquinate synthase; KEGG: sfr:Sfri_0376 3-dehydroquinate synthase YP_001917453.1 KEGG: pth:PTH_0556 predicted ATPase YP_001917454.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: hau:Haur_3169 protein serine/threonine phosphatase YP_001917455.1 KEGG: sth:STH2446 hypothetical protein YP_001917456.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecD; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: swo:Swol_1425 protein-export membrane protein SecD YP_001917457.1 TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: hmo:HM1_1841 protein-export membrane protein SecF YP_001917458.1 TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cth:Cthe_1346 single-stranded-DNA-specific exonuclease RecJ YP_001917459.1 KEGG: mta:Moth_1680 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: amino acid-binding ACT domain protein; TGS domain protein; metal-dependent phosphohydrolase HD sub domain; RelA/SpoT domain protein; SMART: metal-dependent phosphohydrolase HD region YP_001917460.1 PFAM: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: cdf:CD2743 putative D-tyrosyl-tRNA protein YP_001917461.1 PFAM: beta-lactamase domain protein; KEGG: drm:Dred_0735 beta-lactamase domain protein YP_001917462.1 KEGG: pth:PTH_1048 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_001917463.1 TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); GAD domain protein; tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; KEGG: chy:CHY_2204 aspartyl-tRNA synthetase YP_001917464.1 PFAM: protein of unknown function DUF156; KEGG: cdf:CD2730 hypothetical protein YP_001917466.1 TIGRFAM: MraZ protein; PFAM: protein of unknown function UPF0040; KEGG: oih:OB1461 hypothetical protein YP_001917467.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: amt:Amet_2887 S-adenosyl-methyltransferase MraW YP_001917468.1 KEGG: amt:Amet_2886 hypothetical protein YP_001917469.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; KEGG: oih:OB1465 stage V sporulation protein D YP_001917470.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: mta:Moth_0838 UDP-N-acetylmuramyl-tripeptide synthetases YP_001917471.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: tpd:Teth39_0809 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanyl ligase YP_001917472.1 KEGG: bsu:BSU15190 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: glycosyl transferase family 4 YP_001917473.1 TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: csc:Csac_0923 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_001917474.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: bld:BLi01738 SpoVE YP_001917475.1 KEGG: bha:BH2565 N-acetylglucosaminyl transferase; TIGRFAM: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain YP_001917476.1 TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: aoe:Clos_1380 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001917477.1 PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: drm:Dred_0679 polypeptide-transport-associated domain protein, FtsQ-type YP_001917478.1 PFAM: cell division protein FtsA; KEGG: bha:BH2559 cell-division protein (septum formation) YP_001917479.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ domain protein; KEGG: pth:PTH_1850 cell division GTPase YP_001917480.1 PFAM: peptidase U4 sporulation factor SpoIIGA; KEGG: mta:Moth_0851 peptidase U4, sporulation factor SpoIIGA YP_001917481.1 sigma-29; sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed in the mother cell at the onset of sporulation YP_001917482.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin YP_001917483.1 TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein; KEGG: drm:Dred_0688 PRC-barrel domain protein YP_001917484.1 PFAM: protein of unknown function DUF152; KEGG: amt:Amet_2867 protein of unknown function DUF152 YP_001917485.1 KEGG: aoe:Clos_1406 hypothetical protein YP_001917486.1 PFAM: alanine racemase domain protein; KEGG: cth:Cthe_0792 protein of unknown function UPF0001 YP_001917487.1 PFAM: protein of unknown function DUF552; KEGG: dsy:DSY2887 hypothetical protein YP_001917488.1 PFAM: protein of unknown function YGGT; KEGG: swo:Swol_0956 protein of unknown function YGGT YP_001917489.1 PFAM: RNA-binding S4 domain protein; KEGG: aoe:Clos_1410 RNA-binding S4 domain protein YP_001917490.1 PFAM: DivIVA family protein; KEGG: bha:BH2546 cell-division initiation protein (septum placement) YP_001917491.1 TIGRFAM: isoleucyl-tRNA synthetase; KEGG: tpd:Teth39_0874 isoleucyl-tRNA synthetase YP_001917492.1 KEGG: tpd:Teth39_0898 hypothetical protein YP_001917493.1 TIGRFAM: sporulation protein, yteA family; PFAM: zinc finger DksA/TraR C4-type; KEGG: gtn:GTNG_2776 DnaK suppressor protein YP_001917494.1 TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: hmo:HM1_2103 signal peptidase II YP_001917495.1 KEGG: aoe:Clos_1417 pseudouridine synthase, RluA family; TIGRFAM: pseudouridine synthase, RluA family; PFAM: RNA-binding S4 domain protein; pseudouridine synthase YP_001917496.1 PFAM: protein of unknown function DUF814; Fibronectin-binding A domain protein; KEGG: tpd:Teth39_1330 fibronectin-binding A domain protein YP_001917497.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: drm:Dred_1692 ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_001917498.1 PFAM: YicC domain protein; domain of unknown function DUF1732; KEGG: cno:NT01CX_2251 hypothetical protein YP_001917499.1 PFAM: protein of unknown function DUF370; KEGG: ckl:CKL_1364 hypothetical protein YP_001917500.1 KEGG: tex:Teth514_1761 guanylate kinase; PFAM: guanylate kinase; SMART: guanylate kinase/L-type calcium channel region YP_001917501.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; KEGG: cth:Cthe_1314 DNA-directed RNA polymerase, omega subunit YP_001917502.1 TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: flavoprotein; DNA/pantothenate metabolism flavoprotein domain protein; KEGG: aoe:Clos_1425 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase YP_001917503.1 KEGG: tpd:Teth39_1321 primosomal protein N'; TIGRFAM: primosomal protein N'; PFAM: helicase domain protein; type III restriction protein res subunit; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases YP_001917504.1 KEGG: chy:CHY_1484 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_001917505.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: oih:OB1506 methionyl-tRNA formyltransferase YP_001917506.1 PFAM: protein of unknown function DUF116; KEGG: pth:PTH_1789 hypothetical protein YP_001917507.1 PFAM: peptidase membrane zinc metallopeptidase putative; KEGG: amt:Amet_2783 peptidase, membrane zinc metallopeptidase, putative YP_001917508.1 TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: cth:Cthe_0571 sun protein YP_001917509.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: gka:GK1174 hypothetical protein YP_001917510.1 PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: aoe:Clos_1433 protein serine/threonine phosphatase YP_001917511.1 PFAM: protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: tpd:Teth39_1313 serine/threonine protein kinase with PASTA sensor(s) YP_001917512.1 TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: lwe:lwe1838 ribosome-associated GTPase YP_001917513.1 PFAM: ribulose-phosphate 3-epimerase; KEGG: tte:TTE1498 pentose-5-phosphate-3-epimerase YP_001917514.1 PFAM: ribosomal protein L28; KEGG: cdf:CD2562A 50S ribosomal protein L28 YP_001917515.1 PFAM: protein of unknown function DUF322; KEGG: ctc:CTC01229 putative asp23 protein YP_001917516.1 PFAM: Dak phosphatase; KEGG: sae:NWMN_1136 Dak phosphatase YP_001917517.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: bcl:ABC2308 hypothetical protein YP_001917518.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: tte:TTE1490 small, acid-soluble spore proteins, alpha/be YP_001917519.1 TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; KEGG: lin:lin2159 hypothetical protein YP_001917520.1 KEGG: csc:Csac_1792 pantetheine-phosphate adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase YP_001917521.1 TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein; KEGG: pth:PTH_1749 hypothetical protein YP_001917522.1 PFAM: Patatin; KEGG: gka:GK1101 hypothetical protein YP_001917523.1 PFAM: PDZ/DHR/GLGF domain protein; KEGG: oih:OB1453 hypothetical protein YP_001917524.1 PFAM: protein of unknown function DUF795; KEGG: tex:Teth514_1733 protein of unknown function DUF795 YP_001917525.1 PFAM: protein of unknown function DUF177; KEGG: sth:STH1442 hypothetical protein YP_001917526.1 TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: gur:Gura_1873 50S ribosomal protein L32 YP_001917527.1 TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein; KEGG: amt:Amet_2759 fatty acid/phospholipid synthesis protein PlsX YP_001917528.1 KEGG: dsy:DSY2663 3-oxoacyl-(acyl carrier protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_001917529.1 TIGRFAM: enoyl-(acyl-carrier-protein) reductase II; PFAM: 2-nitropropane dioxygenase NPD; KEGG: aoe:Clos_1453 2-nitropropane dioxygenase NPD YP_001917530.1 TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase; KEGG: tex:Teth514_1724 malonyl CoA-acyl carrier protein transacylase YP_001917531.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bpu:BPUM_1490 3-oxoacyl-[acyl-carrier-protein] reductase YP_001917532.1 TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: chy:CHY_1446 acyl carrier protein YP_001917533.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase; KEGG: amt:Amet_2753 beta-ketoacyl synthase-like protein YP_001917534.1 PFAM: ribonuclease III; double-stranded RNA binding domain protein; KEGG: drm:Dred_2069 ribonuclease III YP_001917535.1 PFAM: Stage V sporulation protein S; KEGG: mta:Moth_0952 stage V sporulation protein S YP_001917536.1 TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; KEGG: oih:OB1528 chromosome segregation SMC protein YP_001917537.1 KEGG: cth:Cthe_0926 signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_001917538.1 PFAM: Bacterio-opsin activator HTH domain protein; putative helix-turn-helix protein YlxM/p13 family protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: swo:Swol_1499 hypothetical protein YP_001917539.1 KEGG: aoe:Clos_1463 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_001917540.1 PFAM: ribosomal protein S16; KEGG: gtn:GTNG_1050 ribosomal protein S16 (BS17) YP_001917541.1 KEGG: amt:Amet_2745 RNA-binding protein (KH domain) YP_001917542.1 TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: cth:Cthe_0767 16S rRNA processing protein RimM YP_001917543.1 KEGG: bha:BH2479 tRNA methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_001917544.1 PFAM: ribosomal protein L19; KEGG: hmo:HM1_2188 50S ribosomal protein L19 YP_001917545.1 KEGG: pth:PTH_1717 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein YP_001917546.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids YP_001917547.1 PFAM: protein of unknown function UPF0102; KEGG: tte:TTE1452 hypothetical protein YP_001917548.1 KEGG: cth:Cthe_0455 Mg chelatase, subunit ChlI; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001917549.1 PFAM: protein of unknown function DUF939; KEGG: gtn:GTNG_0481 integral membrane protein YP_001917550.1 PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: bpu:BPUM_2685 asparagine synthase (glutamine-hydrolyzing) YP_001917551.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: deb:DehaBAV1_0653 DNA protecting protein DprA YP_001917552.1 KEGG: bha:BH2467 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: TOPRIM domain protein; DNA topoisomerase type IA central domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I ATP-binding; DNA topoisomerase I DNA-binding; Toprim sub domain protein YP_001917553.1 TIGRFAM: gid protein; PFAM: glucose-inhibited division protein A; KEGG: hmo:HM1_2212 tRNA uridine 5-carboxymethylaminomethyl modification enzyme YP_001917554.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: drm:Dred_1982 tyrosine recombinase XerC YP_001917555.1 heat shock protein involved in degradation of misfolded proteins YP_001917556.1 heat shock protein involved in degradation of misfolded proteins YP_001917557.1 CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase (By similarity). It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor YP_001917558.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: swo:Swol_1977 hypothetical protein YP_001917559.1 TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein; KEGG: tpd:Teth39_1260 flagellar basal-body rod protein FlgB YP_001917560.1 TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: csc:Csac_1255 flagellar basal-body rod protein FlgC YP_001917561.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: tpt:Tpet_1417 flagellar hook-basal body complex subunit FliE YP_001917562.1 TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; KEGG: ckl:CKL_1153 FliF YP_001917563.1 PFAM: flagellar motor switch protein FliG; KEGG: gtn:GTNG_1073 flagellar motor switch protein YP_001917564.1 PFAM: H+transporting two-sector ATPase E subunit; KEGG: tpd:Teth39_1255 flagellar biosynthesis/type III secretory pathway protein-like protein YP_001917565.1 KEGG: hmo:HM1_2224 flagellar protein export ATPase FliI, putative; TIGRFAM: ATPase, FliI/YscN family; flagellar protein export ATPase FliI; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase YP_001917566.1 TIGRFAM: flagellar export protein FliJ; KEGG: cth:Cthe_0469 flagellar export protein FliJ YP_001917567.1 KEGG: bha:BH2453 hypothetical protein YP_001917568.1 PFAM: flagellar hook-length control protein; KEGG: ddi:DDB_0191136 actin binding protein YP_001917569.1 PFAM: flagellar hook capping protein; KEGG: csc:Csac_1264 flagellar hook capping protein YP_001917570.1 TIGRFAM: flagellar operon protein; KEGG: aoe:Clos_1487 flagellar operon protein YP_001917571.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: lic:LIC11188 flagellar hook protein FlgE YP_001917572.1 PFAM: flagellar FlbD family protein; KEGG: tte:TTE1432 uncharacterized protein, possibly involved in motility YP_001917573.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: amt:Amet_2714 MotA/TolQ/ExbB proton channel YP_001917574.1 PFAM: OmpA/MotB domain protein; KEGG: tte:TTE0542 flagellar motor protein YP_001917575.1 PFAM: flagellar basal body-associated protein FliL; KEGG: nis:NIS_0629 flagellar basal body-associated protein FliL YP_001917576.1 PFAM: surface presentation of antigens (SPOA) protein; flagellar motor switch protein FliM; KEGG: hmo:HM1_2233 flagellar motor switch protein FliM YP_001917577.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein; KEGG: bld:BLi01853 flagellar motor switch protein YP_001917578.1 PFAM: response regulator receiver; KEGG: bpu:BPUM_1532 response regulator CheY YP_001917579.1 KEGG: oih:OB1570 flagellar protein YP_001917580.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus YP_001917581.1 TIGRFAM: flagellar biosynthetic protein FliQ; PFAM: export protein FliQ family 3; KEGG: oih:OB1572 flagellar biosynthesis protein FliQ YP_001917582.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: amt:Amet_2705 flagellar biosynthesis protein FliR YP_001917583.1 TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter; KEGG: bsu:BSU16380 flagellar biosynthesis protein FlhB YP_001917584.1 TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: bha:BH2438 flagellar biosynthesis protein A YP_001917585.1 PFAM: GTP-binding signal recognition particle SRP54 G- domain; SMART: AAA ATPase; KEGG: cbf:CLI_2711 flagellar biosynthesis protein FlhF YP_001917586.1 KEGG: cdf:CD0265 flagellar number regulator YP_001917587.1 PFAM: type IV pilus assembly PilZ; KEGG: tte:TTE1419 hypothetical protein YP_001917588.1 PFAM: CheB methylesterase; response regulator receiver; KEGG: swo:Swol_0873 protein-glutamate methylesterase YP_001917589.1 PFAM: CheW domain protein; ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; P2 response regulator binding domain protein; KEGG: hmo:HM1_2247 CheA signal transduction histidine kinase YP_001917590.1 PFAM: CheW domain protein; KEGG: dde:Dde_2040 CheW protein YP_001917591.1 PFAM: CheC domain protein; KEGG: bha:BH2434 inhibition of CheR-mediated methylation of MCPs YP_001917592.1 stimulates methylation of MCP proteins; PFAM: CheD family protein; KEGG: aoe:Clos_1509 CheD, stimulates methylation of MCP proteins YP_001917593.1 KEGG: kra:Krad_1411 RNA polymerase, sigma 28 subunit, FliA/WhiG; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2 YP_001917594.1 PFAM: protein of unknown function DUF342; KEGG: cth:Cthe_0498 protein of unknown function DUF342 YP_001917595.1 KEGG: hmo:HM1_2253 hypothetical protein YP_001917596.1 KEGG: cth:Cthe_0500 hypothetical protein YP_001917597.1 KEGG: mmq:MmarC5_0681 tetratricopeptide TPR_2 repeat protein YP_001917598.1 PFAM: ribosomal protein S2; KEGG: drm:Dred_1978 ribosomal protein S2 YP_001917599.1 TIGRFAM: translation elongation factor Ts; PFAM: ubiquitin-associated- domain-containing protein; Translation elongation factor EFTs/EF1B dimerisation; KEGG: pth:PTH_1253 translation elongation factor Ts YP_001917600.1 TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: chy:CHY_1785 uridylate kinase YP_001917601.1 PFAM: ribosome recycling factor; KEGG: chy:CHY_1784 ribosome recycling factor YP_001917603.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: drm:Dred_1974 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001917604.1 KEGG: tte:TTE1404 undecaprenyl pyrophosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_001917605.1 PFAM: phosphatidate cytidylyltransferase; KEGG: amt:Amet_2683 phosphatidate cytidylyltransferase YP_001917606.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate YP_001917607.1 TIGRFAM: membrane-associated zinc metalloprotease; PFAM: PDZ/DHR/GLGF domain protein; peptidase M50; KEGG: drm:Dred_1969 putative membrane-associated zinc metalloprotease YP_001917608.1 KEGG: tte:TTE1400 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein YP_001917609.1 PFAM: glycosyl transferase family 2; KEGG: tte:TTE1399 glycosyltransferase involved in cell wall biogenesis YP_001917610.1 KEGG: mta:Moth_1045 DNA polymerase III, alpha subunit, gram-positive type; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DNA polymerase III alpha subunit; SMART: phosphoesterase PHP domain protein YP_001917611.1 PFAM: protein of unknown function DUF150; KEGG: mta:Moth_1046 protein of unknown function DUF150 YP_001917612.1 KEGG: dsy:DSY2520 hypothetical protein; TIGRFAM: transcription termination factor NusA; PFAM: RNA binding S1 domain protein; NusA domain protein; SMART: KH domain protein YP_001917613.1 PFAM: protein of unknown function DUF448; KEGG: chy:CHY_1768 hypothetical protein YP_001917614.1 PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: sae:NWMN_1177 ribosomal protein L7Ae YP_001917615.1 TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; translation initiation factor IF-2 domain protein; KEGG: tte:TTE1393 translation initiation factor IF-2 YP_001917616.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock YP_001917617.1 PFAM: phosphoesterase RecJ domain protein; KEGG: cno:NT01CX_2134 exopolyphosphatase family protein YP_001917618.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase B; KEGG: tex:Teth514_1642 tRNA pseudouridine synthase B YP_001917619.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: sat:SYN_01948 riboflavin kinase / FMN adenylyltransferase YP_001917620.1 PFAM: ribosomal protein S15; KEGG: csc:Csac_2065 30S ribosomal protein S15 YP_001917621.1 KEGG: gtn:GTNG_1123 polynucleotide phosphorylase PNPase; PFAM: 3' exoribonuclease; RNA binding S1 domain protein; KH type 1 domain protein; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; SMART: KH domain protein YP_001917622.1 PFAM: polysaccharide deacetylase; KEGG: oih:OB1605 hypothetical protein YP_001917623.1 PFAM: VanW family protein; KEGG: csc:Csac_1552 VanW family protein YP_001917624.1 PFAM: peptidase M16 domain protein; KEGG: bcy:Bcer98_2457 peptidase M16 domain protein YP_001917625.1 KEGG: mta:Moth_0807 hypothetical protein YP_001917626.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pth:PTH_2468 retron-type reverse transcriptase YP_001917627.1 catalyzes the synthesis of dipicolinic acid from dihydroxydipicolinic acid; plays a role in spore heat resistance YP_001917628.1 involved in production of dipicolinic acid (pyridine-2,6-dicarboxylic acid, DPA) which is synthesized late in sporulation in the mother cell and accumulates in the spore; mutations in this gene result in a lack of DPA synthesis; presumably functions with SpoVFA to form the synthase enzyme YP_001917629.1 KEGG: tte:TTE1382 aspartate kinase I; TIGRFAM: aspartate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_001917630.1 KEGG: pth:PTH_1288 dihydrodipicolinate synthase/N-acetylneuraminate lyase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_001917631.1 PFAM: beta-lactamase domain protein; RNA-metabolising metallo-beta-lactamase; KEGG: chy:CHY_1157 metallo-beta-lactamase family protein YP_001917632.1 PFAM: peptidase S14 ClpP; KEGG: mta:Moth_1071 peptidase S14, ClpP YP_001917633.1 KEGG: pth:PTH_1291 hypothetical protein YP_001917634.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pth:PTH_2468 retron-type reverse transcriptase YP_001917635.1 KEGG: cpf:CPF_2677 Na/Pi-cotransporter family protein/PhoU family protein YP_001917636.1 PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: chy:CHY_1159 DNA translocase FtsK YP_001917637.1 KEGG: tpd:Teth39_0675 hypothetical protein YP_001917638.1 KEGG: cdf:CD1326 radical SAM-superfamily protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme YliG; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB YP_001917639.1 TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ctc:CTC01288 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_001917640.1 KEGG: drm:Dred_1924 hypothetical protein YP_001917641.1 PFAM: peptidase M41; AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: tpd:Teth39_2125 microtubule-severing ATPase YP_001917642.1 TIGRFAM: competence/damage-inducible protein CinA; PFAM: molybdopterin binding domain; CinA domain protein; KEGG: cth:Cthe_1052 competence/damage-inducible protein CinA YP_001917643.1 PFAM: metallophosphoesterase; KEGG: swo:Swol_2226 hypothetical protein YP_001917644.1 KEGG: bha:BH2383 recombinase A; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase YP_001917645.1 PFAM: regulatory protein RecX; KEGG: sru:SRU_2134 regulatory protein RecX YP_001917646.1 KEGG: aoe:Clos_1543 RNA binding metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; YmdA/YtgF protein; PFAM: KH type 1 domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KH domain protein YP_001917647.1 PFAM: metallophosphoesterase; KEGG: csc:Csac_2135 metallophosphoesterase YP_001917648.1 PFAM: Stage V sporulation protein S; KEGG: ckl:CKL_1447 hypothetical protein YP_001917649.1 PFAM: peptidase M19 renal dipeptidase; KEGG: tte:TTE2129 Zn-dependent dipeptidase, microsomal dipeptidase homolog YP_001917650.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: aoe:Clos_1545 PHP domain protein YP_001917651.1 PFAM: regulatory protein GntR HTH; KEGG: amt:Amet_3417 regulatory protein GntR, HTH YP_001917652.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: dvl:Dvul_1224 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001917653.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: pth:PTH_0847 pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit YP_001917654.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: hmo:HM1_2763 2-oxoacid:ferredoxin oxidoreductase, beta subunit YP_001917655.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: mja:MJ0536 2-oxoglutarate ferredoxin oxidoreductase subunit gamma YP_001917656.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: tte:TTE1344 glutamate dehydrogenase/leucine dehydrogenase YP_001917657.1 KEGG: aoe:Clos_0436 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase YP_001917658.1 PFAM: cobalamin B12-binding domain protein; KEGG: tte:TTE2388 methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) YP_001917659.1 TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: tte:TTE1219 lactoylglutathione lyase and related lyase YP_001917660.1 PFAM: carboxyl transferase; KEGG: tte:TTE2385 acetyl-CoA carboxylase alpha subunit YP_001917661.1 PFAM: sodium pump decarboxylase gamma subunit; KEGG: tte:TTE2384 hypothetical protein YP_001917662.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: cth:Cthe_0700 biotin/lipoyl attachment protein YP_001917663.1 KEGG: tpd:Teth39_0907 sodium ion-translocating decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit YP_001917664.1 PFAM: VanW family protein; KEGG: pth:PTH_1067 uncharacterized vancomycin resistance protein YP_001917666.1 KEGG: chy:CHY_1398 tRNA-i(6)A37 thiotransferase enzyme MiaB; TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: deoxyribonuclease/rho motif-related TRAM; Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB YP_001917667.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: DNA mismatch repair protein MutS domain protein; MutS III domain protein; MutS II domain protein; MutS IV domain protein; KEGG: cth:Cthe_0777 DNA mismatch repair protein MutS YP_001917668.1 TIGRFAM: DNA mismatch repair protein MutL; PFAM: DNA mismatch repair protein domain protein; MutL dimerisation; KEGG: oih:OB1632 DNA mismatch repair protein YP_001917669.1 KEGG: aoe:Clos_1552 tRNA delta(2)-isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_001917670.1 TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core; KEGG: gka:GK1313 RNA-binding protein Hfq YP_001917671.1 PFAM: Abortive infection protein; KEGG: mth:MTH623 hypothetical protein YP_001917672.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: pth:PTH_1346 ATPase of the AAA+ class YP_001917673.1 PFAM: Aluminium resistance family protein; KEGG: cth:Cthe_0794 aluminium resistance protein YP_001917674.1 KEGG: cth:Cthe_0773 SOS-response transcriptional repressor, LexA; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; peptidase S24 and S26 domain protein YP_001917675.1 PFAM: Peptidoglycan-binding LysM; KEGG: tfu:Tfu_2151 peptidoglycan-binding LysM YP_001917676.1 PFAM: transposase IS3/IS911 family protein; KEGG: bcy:Bcer98_2284 transposase IS3/IS911 family protein YP_001917677.1 KEGG: vco:VC0395_0922 hypothetical protein YP_001917678.1 SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ssp:SSP1552 putative protein kinase YP_001917679.1 PFAM: KAP P-loop domain protein; KEGG: fjo:Fjoh_3630 kap P-loop domain protein YP_001917680.1 KEGG: bfs:BF2124 hypothetical protein YP_001917681.1 KEGG: bxe:Bxe_A0066 hypothetical protein YP_001917682.1 KEGG: ppd:Ppro_1328 putative orphan protein YP_001917683.1 KEGG: ade:Adeh_3229 hypothetical protein YP_001917684.1 PFAM: UvrD/REP helicase; KEGG: dac:Daci_4163 UvrD/REP helicase YP_001917685.1 KEGG: dac:Daci_4162 ATP-dependent endonuclease family protein YP_001917687.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: lac:LBA0959 integrase-recombinase YP_001917688.1 SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: ser:SERP2479 hypothetical protein YP_001917689.1 KEGG: ppd:Ppro_0234 hypothetical protein YP_001917690.1 KEGG: ppd:Ppro_0235 hypothetical protein YP_001917691.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: cph:Cpha266_2227 DEAD/DEAH box helicase domain protein YP_001917692.1 KEGG: cph:Cpha266_2228 hypothetical protein YP_001917693.1 KEGG: dsy:DSY0670 hypothetical protein YP_001917694.1 KEGG: pfa:MAL3P7.21 hypothetical protein YP_001917695.1 PFAM: transposase IS3/IS911 family protein; KEGG: bcy:Bcer98_2284 transposase IS3/IS911 family protein YP_001917696.1 PFAM: transposase IS3/IS911 family protein; KEGG: bcy:Bcer98_2284 transposase IS3/IS911 family protein YP_001917697.1 KEGG: pyo:PY07173 hypothetical protein Pfam: Rtt106 MMR_HSR1 Miro Dynamin_N PROSITE: ASN_RICH ASP_RICH GLU_RICH LYS_RICH NLS_BP YP_001917698.1 KEGG: aba:Acid345_1919 hypothetical protein YP_001917700.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mlo:mlr1123 hypothetical protein YP_001917702.1 PFAM: copper amine oxidase domain protein; KEGG: amt:Amet_0535 hypothetical protein YP_001917703.1 PFAM: peptidase M20; peptidase M28; KEGG: bha:BH3861 aminopeptidase YP_001917704.1 PFAM: Peptidase M23; KEGG: lpc:LPC_2080 secreted peptidase YP_001917706.1 KEGG: rci:LRC302 hypothetical protein YP_001917707.1 KEGG: tet:TTHERM_00441970 TPR Domain containing protein Pfam: TPR_1 TPR_2 VAR1 TPR_3 PROSITE: ASN_RICH GLN_RICH GLU_RICH TPR TPR_REGION YP_001917708.1 SMART: Leucine-rich repeat, ribonuclease inhibitor subtype; KEGG: lpf:lpl1579 hypothetical protein YP_001917709.1 KEGG: bha:BH2028 hypothetical protein YP_001917710.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: bsu:BSU30780 O-succinylbenzoate-CoA synthase YP_001917711.1 KEGG: tpd:Teth39_0430 hypothetical protein YP_001917712.1 PFAM: carbon starvation protein CstA; KEGG: amt:Amet_4301 carbon starvation protein CstA YP_001917713.1 PFAM: aminotransferase class V; KEGG: dsy:DSY4951 hypothetical protein YP_001917714.1 PFAM: KWG Leptospira repeat protein; KEGG: amt:Amet_1855 KWG Leptospira repeat protein YP_001917715.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ana:all3130 hypothetical protein YP_001917717.1 PFAM: Rhomboid family protein; KEGG: mja:MJ0610.1 GlpG-related protein YP_001917718.1 KEGG: cpf:CPF_1131 hypothetical protein YP_001917719.1 KEGG: amt:Amet_2256 hypothetical protein YP_001917720.1 PFAM: GCN5-related N-acetyltransferase; KEGG: xfa:XF1323 hypothetical protein YP_001917721.1 KEGG: amt:Amet_2256 hypothetical protein YP_001917722.1 KEGG: cte:CT1526 Rab family protein YP_001917723.1 PFAM: nitroreductase; KEGG: amt:Amet_2826 nitroreductase YP_001917724.1 PFAM: restriction endonuclease; KEGG: btk:BT9727_2101 Mrr restriction protein-related YP_001917725.1 PFAM: sodium/glutamate symporter; KEGG: mbu:Mbur_1785 sodium/glutamate symporter YP_001917726.1 PFAM: NADPH-dependent FMN reductase; KEGG: drm:Dred_0452 NADPH-dependent FMN reductase YP_001917728.1 KEGG: cau:Caur_0879 alpha-1,6-glucosidase, pullulanase-type YP_001917730.1 PFAM: ABC-2 type transporter; KEGG: lca:LSEI_1014 ABC-type multidrug transport system, permease component YP_001917731.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pmo:Pmob_0278 ABC transporter related YP_001917732.1 PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: cbe:Cbei_1480 two component transcriptional regulator, LytTR family YP_001917733.1 PFAM: ATP-binding region ATPase domain protein; KEGG: swo:Swol_2401 signal transduction histidine kinase regulating citrate/malate metabolism YP_001917734.1 PFAM: glycosyl transferase family 2; KEGG: bpu:BPUM_0679 possible glycosyltransferase YP_001917735.1 KEGG: rru:Rru_A2860 hypothetical protein YP_001917736.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; Male sterility domain; KEGG: gka:GK3296 UDP-glucose 4-epimerase YP_001917737.1 KEGG: ccv:CCV52592_0405 ribonuclease HII (RNase HII) YP_001917738.1 KEGG: tte:TTE0666 acetyltransferase (the isoleucine patch superfamily) YP_001917739.1 KEGG: amt:Amet_3428 hypothetical protein YP_001917740.1 KEGG: amt:Amet_3446 hypothetical protein YP_001917741.1 PFAM: glycosyl transferase family 2; KEGG: cac:CAC2175 glycosyltransferase YP_001917742.1 KEGG: bay:RBAM_037570 hypothetical protein YP_001917743.1 KEGG: fnu:FN0922 homoserine kinase YP_001917744.1 KEGG: cau:Caur_2850 nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_001917745.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: btl:BALH_0444 UDP-glucose 4-epimerase YP_001917746.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: ctc:CTC02269 UTP-glucose-1-phosphate uridylyltransferase YP_001917747.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ssp:SSP1349 cold shock protein YP_001917748.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: tpd:Teth39_1302 small acid-soluble spore protein, alpha/beta type YP_001917750.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: cno:NT01CX_0617 cold shock protein CspB YP_001917751.1 KEGG: sth:STH2733 hypothetical protein YP_001917753.1 KEGG: pyo:PY05434 hypothetical protein PROSITE: ASN_RICH LYS_RICH YP_001917754.1 PFAM: transposase IS3/IS911 family protein; KEGG: bcy:Bcer98_2284 transposase IS3/IS911 family protein YP_001917755.1 KEGG: mta:Moth_0580 hypothetical protein YP_001917757.1 KEGG: tde:TDE0192 hypothetical protein YP_001917758.1 PFAM: extracellular solute-binding protein family 5; KEGG: amt:Amet_2915 extracellular solute-binding protein, family 5 YP_001917759.1 KEGG: ctc:CTC01994 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_001917760.1 KEGG: chy:CHY_0957 acid phosphatase SurE; TIGRFAM: stationary-phase survival protein SurE; PFAM: Survival protein SurE YP_001917761.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: swo:Swol_0781 amidohydrolase family protein YP_001917762.1 KEGG: tte:TTE2430 predicted hydrolase of metallo-beta-lactamase fold YP_001917763.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: tet:TTHERM_00713550 TPR Domain containing protein Pfam: Pkinase_Tyr Pkinase TPR_2 TPR_1 LMP PROSITE: TPR TPR_REGION PROTEIN_KINASE_DOM YP_001917765.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: aoe:Clos_0298 UDP-N-acetylmuramyl-tripeptide synthetase YP_001917766.1 PFAM: MCP methyltransferase CheR-type; KEGG: aoe:Clos_1560 MCP methyltransferase, CheR-type YP_001917767.1 PFAM: nucleoside diphosphate kinase; KEGG: afu:AF0767 nucleoside diphosphate kinase (ndk) YP_001917768.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; KEGG: bpu:BPUM_1011 phytoene dehydrogenase YP_001917769.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: aoe:Clos_0883 MATE efflux family protein YP_001917770.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: aeh:Mlg_0734 response regulator receiver protein YP_001917771.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: amt:Amet_2080 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001917772.1 KEGG: sen:SACE_4180 hypothetical protein YP_001917773.1 PFAM: GerA spore germination protein; KEGG: pth:PTH_1231 bacillus/clostridium GerA spore germination protein YP_001917774.1 KEGG: amt:Amet_1655 hypothetical protein YP_001917775.1 PFAM: SurA domain; KEGG: amt:Amet_0798 hypothetical protein YP_001917776.1 KEGG: ctc:CTC01239 phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase YP_001917777.1 PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: mxa:MXAN_2203 hypothetical protein YP_001917780.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pth:PTH_2468 retron-type reverse transcriptase YP_001917782.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: aeh:Mlg_0734 response regulator receiver protein YP_001917783.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bvu:BVU_3271 glycine betaine/L-proline transport system permease YP_001917784.1 KEGG: ckl:CKL_0777 ProV; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase YP_001917785.1 PFAM: SCP-like extracellular; KEGG: bcl:ABC2540 hypothetical protein YP_001917786.1 KEGG: tva:TVAG_387410 viral A-type inclusion protein, putative Pfam: LRR_1 HALZ Osmo_CC Rho_Binding THOC7 EzrA ASD2 CHASE3 DUF593 Filament DHC_N1 Rab5-bind ATG16 Lipocalin DUF827 Prefoldin_2 Myosin_tail_1 Laminin_I Tropomyosin TBPIP HR1 BRE1 Microtub_assoc FliD_C rRNA_processing DASH_Duo1 Vicilin_N PspA_IM30 DUF536 AalphaY_MDB PROSITE: ASN_RICH LYS_RICH YP_001917787.1 TIGRFAM: stage IV sporulation protein A; PFAM: Sporulation stage IV protein A; KEGG: bha:BH1645 stage IV sporulation protein A (spore cortex formation and coat assembly) YP_001917788.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: oih:OB2375 intracellular alkaline serine proteinase YP_001917789.1 PFAM: Peptidoglycan-binding LysM; KEGG: mta:Moth_1271 peptidoglycan-binding LysM YP_001917790.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; 6-phosphogluconate dehydrogenase NAD-binding; Ketopantoate reductase ApbA/PanE domain protein; KEGG: amt:Amet_2855 glycerol-3-phosphate dehydrogenase (NAD(P)(+)) YP_001917791.1 PFAM: protein of unknown function DUF205; KEGG: tpd:Teth39_0840 protein of unknown function DUF205 YP_001917792.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: gtn:GTNG_2154 GTP-binding protein-like protein YP_001917793.1 PFAM: protein of unknown function DUF512; KEGG: tex:Teth514_1984 protein of unknown function DUF512 YP_001917794.1 KEGG: mta:Moth_1325 hypothetical protein YP_001917795.1 KEGG: amt:Amet_2861 hypothetical protein YP_001917796.1 KEGG: oih:OB1799 hypothetical protein YP_001917797.1 TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein; KEGG: aoe:Clos_1395 stage II sporulation P family protein YP_001917798.1 KEGG: tpd:Teth39_0832 protein of unknown function DUF1614 YP_001917799.1 catalyzes the isomerization of isopentenyl pyrophosphate to dimethylallyl diphosphate YP_001917800.1 TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: RNA binding S1 domain protein; LytB protein; KEGG: pth:PTH_1619 hypothetical protein YP_001917801.1 PFAM: phospholipid/glycerol acyltransferase; KEGG: oih:OB1801 1-acyl-sn-glycerol-3-phosphate acetyltransferase YP_001917802.1 KEGG: cdf:CD1816 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region YP_001917803.1 TIGRFAM: chorismate mutase; PFAM: Chorismate mutase of the AroH class; KEGG: cth:Cthe_0711 chorismate mutase YP_001917804.1 KEGG: swo:Swol_1404 hypothetical protein YP_001917805.1 PFAM: RNA-binding S4 domain protein; pseudouridine synthase; KEGG: tpd:Teth39_1141 pseudouridine synthase YP_001917806.1 KEGG: oih:OB1372 hypothetical protein YP_001917807.1 PFAM: Endoribonuclease L-PSP; KEGG: hmo:HM1_2743 endoribonuclease L-psp YP_001917808.1 PFAM: nucleoside recognition domain protein; KEGG: gka:GK2284 spore maturation protein YP_001917809.1 PFAM: nucleoside recognition domain protein; KEGG: mta:Moth_1356 nucleoside recognition YP_001917810.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: tex:Teth514_1575 serine-type D-Ala-D-Ala carboxypeptidase YP_001917811.1 TIGRFAM: sporulation protein YtfJ; PFAM: Sporulation protein YtfJ; KEGG: drm:Dred_1138 hypothetical protein YP_001917812.1 KEGG: drm:Dred_1137 hypothetical protein YP_001917813.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: bha:BH1561 hypothetical protein YP_001917814.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: bld:BLi02468 segregation and condensation protein A YP_001917815.1 PFAM: peptidase M50; KEGG: mta:Moth_1362 peptidase M50 YP_001917816.1 PFAM: CBS domain containing protein; phosphoesterase RecJ domain protein; Polynucleotide adenylyltransferase region; phosphoesterase DHHA1; KEGG: amt:Amet_2529 polynucleotide adenylyltransferase region YP_001917817.1 KEGG: chy:CHY_1953 hypothetical protein YP_001917818.1 KEGG: cth:Cthe_0352 hypothetical protein YP_001917819.1 TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein; KEGG: bcy:Bcer98_3690 sporulation stage V protein AE YP_001917820.1 TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein; KEGG: aoe:Clos_1790 stage V sporulation AD family protein YP_001917821.1 TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein; KEGG: tpd:Teth39_1124 SpoVA protein YP_001917822.1 PFAM: protein of unknown function DUF1458; KEGG: tpd:Teth39_1123 protein of unknown function DUF1458 YP_001917823.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cdf:CD0772 RNA polymerase sigma-F factor YP_001917824.1 KEGG: amt:Amet_2213 anti-sigma F factor; TIGRFAM: anti-sigma F factor; PFAM: ATP-binding region ATPase domain protein YP_001917825.1 TIGRFAM: anti-anti-sigma factor; anti-sigma F factor antagonist; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: cth:Cthe_0118 anti-sigma-factor antagonist YP_001917826.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: aoe:Clos_1588 serine-type D-Ala-D-Ala carboxypeptidase YP_001917827.1 KEGG: chy:CHY_1554 pyrimidine-nucleoside phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain YP_001917828.1 TIGRFAM: inosine guanosine and xanthosine phosphorylase family; purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: purine phosphorylase family 2; KEGG: bwe:BcerKBAB4_3917 purine nucleoside phosphorylase I, inosine and guanosine-specific YP_001917829.1 KEGG: cth:Cthe_0677 phosphopentomutase; TIGRFAM: phosphopentomutase; PFAM: metalloenzyme domain protein; Phosphopentomutase domain protein YP_001917830.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: sth:STH1821 recombinase YP_001917832.1 TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein; KEGG: chy:CHY_0666 alanine dehydrogenase YP_001917833.1 TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane; KEGG: gtn:GTNG_2249 stage II sporulation protein M YP_001917834.1 KEGG: tte:TTE1311 hypothetical protein YP_001917835.1 PFAM: NUDIX hydrolase; KEGG: cth:Cthe_0674 NUDIX hydrolase YP_001917836.1 KEGG: tte:TTE1309 hypothetical protein YP_001917837.1 TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: amt:Amet_4303 pyruvate ferredoxin/flavodoxin oxidoreductase YP_001917838.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: amt:Amet_4304 thiamine pyrophosphate protein domain protein TPP-binding YP_001917839.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: cbf:CLI_3605 putative 2-oxoacid:acceptor oxidoreductase, alpha subunit YP_001917840.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: amt:Amet_4306 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001917841.1 KEGG: tte:TTE2200 hypothetical protein YP_001917842.1 catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate YP_001917843.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: oih:OB1869 leucine dehydrogenase YP_001917844.1 KEGG: cbf:CLI_3609 phosphate butyryltransferase; TIGRFAM: phosphate butyryltransferase; PFAM: phosphate acetyl/butaryl transferase YP_001917845.1 KEGG: aoe:Clos_2415 PAS modulated sigma54 specific transcriptional regulator, Fis family; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase YP_001917846.1 KEGG: cdf:CD1218 putative glycosyltransferase YP_001917847.1 PFAM: glycosyl transferase family 2; KEGG: tpd:Teth39_1112 glycosyl transferase, family 2 YP_001917848.1 KEGG: aoe:Clos_1599 conserved hypothetical protein YP_001917849.1 PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: cdf:CD1215 putative pyrophosphokinase YP_001917850.1 KEGG: amt:Amet_0778 hypothetical protein YP_001917851.1 TIGRFAM: sporulation transcription factor Spo0A; PFAM: response regulator receiver; Sporulation initiation factor Spo0A; KEGG: cac:CAC2071 Spo0A protein, (CheY-like receiver domain and HTH-type DNA binding domain) YP_001917852.1 TIGRFAM: stage IV sporulation protein B; PFAM: peptidase S55 SpoIVB; KEGG: gtn:GTNG_2318 stage IV sporulation protein B YP_001917853.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: tex:Teth514_1544 DNA repair protein RecN YP_001917854.1 PFAM: ATP-NAD/AcoX kinase; KEGG: tpd:Teth39_1105 ATP-NAD/AcoX kinase YP_001917855.1 TIGRFAM: hemolysin A; PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4 domain protein; KEGG: gka:GK2391 hypothetical protein YP_001917856.1 TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: drm:Dred_1078 deoxyxylulose-5-phosphate synthase YP_001917857.1 KEGG: drm:Dred_1077 hypothetical protein YP_001917858.1 PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; KEGG: amt:Amet_2506 acid phosphatase/vanadium-dependent haloperoxidase related YP_001917859.1 PFAM: Polyprenyl synthetase; KEGG: drm:Dred_1076 polyprenyl synthetase YP_001917860.1 TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit; KEGG: lpc:LPC_1796 exodeoxyribonuclease VII small subunit YP_001917861.1 KEGG: cth:Cthe_0833 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII large subunit; nucleic acid binding OB-fold tRNA/helicase-type YP_001917862.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: mta:Moth_1516 methenyltetrahydrofolate cyclohydrolase YP_001917863.1 PFAM: peptidase M22 glycoprotease; KEGG: aoe:Clos_1612 O-sialoglycoprotein endopeptidase YP_001917864.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: cno:NT01CX_1978 transcription antitermination protein NusB YP_001917865.1 KEGG: swo:Swol_0563 hypothetical protein YP_001917866.1 KEGG: sth:STH1851 hypothetical protein YP_001917867.1 PFAM: protein of unknown function DUF322; KEGG: hmo:HM1_0284 hypothetical protein YP_001917868.1 KEGG: tte:TTE1290 stage III sporulation protein AH YP_001917869.1 KEGG: bcy:Bcer98_2881 sporulation stage III protein AG YP_001917870.1 TIGRFAM: stage III sporulation protein AF; PFAM: Sporulation stage III protein AF; KEGG: aoe:Clos_1617 sporulation stage III protein AF YP_001917871.1 TIGRFAM: stage III sporulation protein AE; PFAM: Sporulation stage III protein AE; KEGG: drm:Dred_1060 hypothetical protein YP_001917872.1 TIGRFAM: stage III sporulation protein AD; PFAM: Sporulation stage III protein AD; KEGG: hmo:HM1_0277 stage III sporulation protein ad, putative YP_001917873.1 TIGRFAM: stage III sporulation protein AC; PFAM: Stage III sporulation AC family protein; KEGG: aoe:Clos_1620 stage III sporulation AC family protein YP_001917874.1 KEGG: bcy:Bcer98_2886 sporulation stage III protein AB YP_001917875.1 TIGRFAM: stage III sporulation protein AA; SMART: AAA ATPase; KEGG: tte:TTE1283 stage III sporulation protein spoIIIAA YP_001917876.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: swo:Swol_1977 hypothetical protein YP_001917877.1 KEGG: sha:SH2261 hypothetical protein YP_001917878.1 KEGG: tpd:Teth39_1087 hypothetical protein YP_001917879.1 TIGRFAM: translation elongation factor P; PFAM: Elongation factor P/YeiP protein; Elongation factor KOW domain protein; Elongation factor P; KEGG: mta:Moth_1538 translation elongation factor P YP_001917880.1 PFAM: creatinase; peptidase M24; KEGG: tpd:Teth39_1085 peptidase M24 YP_001917881.1 KEGG: drm:Dred_1050 3-dehydroquinate dehydratase, type II; TIGRFAM: 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II YP_001917882.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: tpd:Teth39_1008 cysteine synthase A YP_001917883.1 PFAM: shikimate kinase; KEGG: csc:Csac_2240 shikimate kinase YP_001917884.1 KEGG: cth:Cthe_0851 hypothetical protein YP_001917885.1 KEGG: mta:Moth_1549 N-terminal methylation YP_001917886.1 KEGG: tex:Teth514_1516 hypothetical protein YP_001917888.1 KEGG: ppd:Ppro_0992 type IV pilus assembly protein PilM YP_001917890.1 KEGG: chy:CHY_0637 prepilin peptidase domain protein YP_001917891.1 KEGG: rxy:Rxyl_1161 prepilin-type cleavage/methylation-like protein YP_001917892.1 PFAM: type II secretion system protein; KEGG: csc:Csac_1062 type II secretion system protein YP_001917893.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mta:Moth_1554 type II secretion system protein E YP_001917894.1 TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate/quinate 5-dehydrogenase; Shikimate dehydrogenase substrate binding domain protein; KEGG: mmx:MmarC6_1719 shikimate 5-dehydrogenase YP_001917895.1 PFAM: amino acid permease-associated region; KEGG: lga:LGAS_1784 amino acid transporter YP_001917896.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: tex:Teth514_1377 intracellular protease, PfpI family YP_001917898.1 TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; PFAM: HAD-superfamily phosphatase subfamily IIIA; KEGG: sth:STH1953 hypothetical protein YP_001917899.1 PFAM: sigma-70 region 4 domain protein; KEGG: chy:CHY_0617 sporulation sigma factor SigK YP_001917900.1 PFAM: Resolvase domain; Recombinase; KEGG: bsu:BSU25770 site-specific DNA recombinase YP_001917901.1 PFAM: isochorismatase hydrolase; KEGG: tpd:Teth39_0657 isochorismatase hydrolase YP_001917902.1 PFAM: band 7 protein; KEGG: det:DET0848 SPFH domain/band 7 family domain protein YP_001917903.1 PFAM: band 7 protein; KEGG: afu:AF1420 membrane protein YP_001917904.1 PFAM: protein of unknown function DUF107; KEGG: afu:AF1781 nodulation protein NfeD (NfeD) YP_001917905.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: gka:GK0745 hypothetical protein YP_001917906.1 PFAM: peptidase S49; KEGG: rca:Rcas_2526 signal peptide peptidase SppA, 36K type YP_001917907.1 PFAM: Radical SAM domain protein; KEGG: aae:aq_729 pyruvate formate lyase activating enzyme YP_001917908.1 KEGG: rxy:Rxyl_2190 hypothetical protein YP_001917909.1 PFAM: CBS domain containing protein; peptidase M50; KEGG: sat:SYN_00323 membrane endopeptidase, M50 family YP_001917910.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: aoe:Clos_1009 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_001917911.1 PFAM: nitroreductase; KEGG: amt:Amet_1659 nitroreductase YP_001917912.1 TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase_; KEGG: pmo:Pmob_0275 delta-1-pyrroline-5-carboxylate dehydrogenase YP_001917913.1 PFAM: FAD dependent oxidoreductase; KEGG: drm:Dred_1730 FAD dependent oxidoreductase YP_001917914.1 PFAM: BFD domain protein [2Fe-2S]-binding domain protein; KEGG: drm:Dred_1729 BFD domain protein (2Fe-2S)-binding domain protein YP_001917915.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: drm:Dred_1728 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001917916.1 TIGRFAM: SSS sodium solute transporter superfamily; sodium/proline symporter; PFAM: Na+/solute symporter; KEGG: bha:BH0660 sodium/proline symporter YP_001917917.1 KEGG: aoe:Clos_0659 hypothetical protein YP_001917918.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aoe:Clos_0660 ABC transporter related YP_001917919.1 PFAM: protein of unknown function DUF214; KEGG: amt:Amet_0518 protein of unknown function DUF214 YP_001917920.1 PFAM: thymidine kinase; KEGG: sth:STH3038 thymidine kinase YP_001917921.1 PFAM: protein of unknown function DUF322; KEGG: tpd:Teth39_1096 protein of unknown function DUF322 YP_001917922.1 KEGG: aoe:Clos_2152 conserved hypothetical protein YP_001917923.1 KEGG: hmo:HM1_0328 hypothetical protein YP_001917924.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: cth:Cthe_0487 cobyrinic acid a,c-diamide synthase YP_001917925.1 PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; KEGG: tte:TTE0526 ATP:corrinoid adenosyltransferase YP_001917926.1 PFAM: nucleoside recognition domain protein; KEGG: drm:Dred_2080 nucleoside recognition domain protein YP_001917927.1 PFAM: major facilitator superfamily MFS_1; KEGG: mta:Moth_0116 major facilitator superfamily MFS_1 YP_001917928.1 KEGG: tte:TTE1204 lysine 2,3-aminomutase; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein YP_001917929.1 PFAM: Bacitracin resistance protein BacA; KEGG: bcl:ABC1776 undecaprenyl pyrophosphate phosphatase YP_001917930.1 PFAM: sigma-70 region 2 domain protein; KEGG: mta:Moth_1582 sporulation sigma factor SigK YP_001917931.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: mta:Moth_1006 2-hydroxyglutaryl-CoA dehydratase, D-component YP_001917932.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: chy:CHY_0487 dehydratase family protein YP_001917933.1 TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: mta:Moth_1005 CoA enzyme activase YP_001917934.1 PFAM: FAD dependent oxidoreductase; KEGG: hma:pNG6043 hypothetical protein YP_001917935.1 PFAM: peptidase U32; KEGG: cth:Cthe_1010 peptidase U32 YP_001917936.1 PFAM: aminodeoxychorismate lyase; KEGG: mta:Moth_1637 aminodeoxychorismate lyase YP_001917937.1 PFAM: protein of unknown function DUF1292; KEGG: cth:Cthe_0154 protein of unknown function DUF1292 YP_001917938.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: drm:Dred_0775 Holliday junction resolvase YqgF YP_001917939.1 PFAM: protein of unknown function DUF965; KEGG: aoe:Clos_1665 protein of unknown function DUF965 YP_001917940.1 KEGG: tpd:Teth39_1052 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: alanyl-tRNA synthetase class IIc; phosphoesterase DHHA1; Threonyl/alanyl tRNA synthetase SAD YP_001917941.1 PFAM: protein of unknown function UPF0118; KEGG: amt:Amet_2457 protein of unknown function UPF0118 YP_001917943.1 KEGG: bcl:ABC1590 hypothetical protein YP_001917944.1 PFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: tte:TTE2464 predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain YP_001917945.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: chy:CHY_2201 recombination factor protein RarA YP_001917946.1 PFAM: Radical SAM domain protein; KEGG: cth:Cthe_0906 radical SAM YP_001917947.1 KEGG: cpy:Cphy_0870 conserved hypothetical protein YP_001917948.1 KEGG: cth:Cthe_3092 conserved hypothetical protein, CF-27 family YP_001917949.1 KEGG: ckl:CKL_3140 hypothetical protein YP_001917950.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: bha:BH1229 hypothetical protein YP_001917951.1 KEGG: cth:Cthe_0958 queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylase, various specificities; queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase YP_001917952.1 KEGG: amt:Amet_0772 hypothetical protein YP_001917953.1 TIGRFAM: S-adenosylmethionine--tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: cpf:CPF_2202 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_001917954.1 TIGRFAM: SpoIID/LytB domain protein; PFAM: Stage II sporulation D domain protein; KEGG: mta:Moth_1696 sporulation protein and related proteins-like YP_001917955.1 KEGG: pth:PTH_1029 hypothetical protein YP_001917956.1 KEGG: gur:Gura_1413 Holliday junction DNA helicase B; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: magnesium chelatase ChlI subunit; AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_001917957.1 KEGG: cth:Cthe_0181 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: helix-hairpin-helix motif; RuvA domain protein; DNA recombination protein RuvA domain I; SMART: Helix-hairpin-helix DNA-binding class 1 YP_001917958.1 KEGG: aoe:Clos_1727 crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC YP_001917959.1 KEGG: aoe:Clos_1729 hypothetical protein YP_001917960.1 PFAM: protein of unknown function DUF28; KEGG: pth:PTH_1024 hypothetical protein YP_001917961.1 TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; KEGG: chy:CHY_1526 NAD+ synthetase YP_001917962.1 catalyzes the formation of phenol and pyruvate from tyrosine YP_001917963.1 PFAM: YheO domain protein; KEGG: tpd:Teth39_1426 YheO domain protein YP_001917964.1 KEGG: drm:Dred_0482 hypothetical protein YP_001917965.1 PFAM: amidohydrolase 2; KEGG: bay:RBAM_009100 hypothetical protein YP_001917966.1 PFAM: protein of unknown function DUF896; KEGG: drm:Dred_0755 protein of unknown function DUF896 YP_001917967.1 KEGG: cdf:CD2448 putative radical SAM superfamily protein; TIGRFAM: RNA modification enzyme, MiaB family; MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein; Protein of unknown function UPF0004; SMART: Elongator protein 3/MiaB/NifB YP_001917970.1 TIGRFAM: sporulation protein YunB; PFAM: Sporulation protein YunB; KEGG: cdf:CD0782 hypothetical protein YP_001917971.1 KEGG: drm:Dred_1647 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein YP_001917972.1 KEGG: pth:PTH_1935 membrane carboxypeptidase; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; Fibronectin type III domain protein YP_001917973.1 KEGG: drm:Dred_1638 MutS2 family protein; TIGRFAM: MutS2 family protein; PFAM: DNA mismatch repair protein MutS domain protein; Smr protein/MutS2; SMART: MutS III domain protein YP_001917974.1 PFAM: PHP domain protein; SMART: DNA polymerase X; phosphoesterase PHP domain protein; Helix-hairpin-helix DNA-binding class 1; KEGG: drm:Dred_1634 PHP C-terminal domain protein YP_001917975.1 PFAM: protein of unknown function DUF710; KEGG: drm:Dred_1633 protein of unknown function DUF710 YP_001917976.1 KEGG: cth:Cthe_0215 phenylalanyl-tRNA synthetase subunit beta; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit YP_001917977.1 TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein; KEGG: mta:Moth_1751 phenylalanyl-tRNA synthetase, alpha subunit YP_001917979.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: cth:Cthe_1222 RNA methyltransferase, TrmH family, group 3 YP_001917980.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: swo:Swol_1977 hypothetical protein YP_001917981.1 TIGRFAM: ribosomal protein L20; KEGG: pth:PTH_1953 ribosomal protein L20 YP_001917982.1 PFAM: ribosomal protein L35; KEGG: cno:NT01CX_1762 50S ribosomal protein L35 YP_001917983.1 TIGRFAM: translation initiation factor IF-3; PFAM: initiation factor 3; KEGG: chy:CHY_1578 translation initiation factor IF-3 YP_001917984.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr) YP_001917985.1 KEGG: aoe:Clos_1981 putative membrane protin YP_001917986.1 KEGG: aoe:Clos_1982 sporulation protein YtxC YP_001917987.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: oih:OB1001 glycine betaine ABC transporter substrate-binding protein YP_001917988.1 PFAM: isochorismatase hydrolase; KEGG: pmy:Pmen_3479 isochorismatase hydrolase YP_001917989.1 KEGG: bpu:BPUM_2736 possible transcriptional regulator YP_001917990.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: cdf:CD1702A putative thiamine biosynthesis protein YP_001917991.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: pth:PTH_2396 transposase and inactivated derivatives YP_001917992.1 PFAM: Aldehyde ferredoxin oxidoreductase; KEGG: amt:Amet_0699 aldehyde ferredoxin oxidoreductase YP_001917993.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: ckl:CKL_3436 DhaT2 YP_001917994.1 PFAM: Na+/H+ antiporter NhaC; KEGG: dsy:DSY3651 hypothetical protein YP_001917995.1 TIGRFAM: GTP-binding protein YchF; PFAM: GTP-binding protein HSR1-related; Protein of unknown function DUF933; KEGG: cth:Cthe_0877 translation-associated GTPase YP_001917996.1 PFAM: protein of unknown function DUF188; KEGG: aoe:Clos_2709 protein of unknown function DUF188 YP_001917997.1 PFAM: major facilitator superfamily MFS_1; KEGG: sth:STH523 multidrug efflux protein YP_001917998.1 PFAM: regulatory protein ArsR; KEGG: cdf:CD0559 hypothetical protein YP_001917999.1 PFAM: thioesterase superfamily protein; KEGG: bvu:BVU_1957 hypothetical protein YP_001918000.1 PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; KEGG: sfu:Sfum_3519 putative PAS/PAC sensor protein YP_001918001.1 KEGG: cvi:CV_2953 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein YP_001918002.1 PFAM: protein of unknown function DUF1576; KEGG: amt:Amet_4320 protein of unknown function DUF1576 YP_001918003.1 PFAM: protein of unknown function DUF45; KEGG: cpf:CPF_2595 hypothetical protein YP_001918004.1 PFAM: aminotransferase class I and II; KEGG: cth:Cthe_0755 aspartate aminotransferase YP_001918005.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: tte:TTE2724 predicted Zn-dependent protease and their inactivated homologs YP_001918006.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: tte:TTE2725 predicted Zn-dependent protease and their inactivated homologs YP_001918008.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: amt:Amet_4554 sigma54 specific transcriptional regulator, Fis family YP_001918009.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mta:Moth_2056 NADH:flavin oxidoreductase/NADH oxidase YP_001918010.1 PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: mae:Maeo_0680 dihydroxy-acid dehydratase YP_001918011.1 KEGG: ckl:CKL_2056 hypothetical protein YP_001918012.1 PFAM: amidohydrolase; D-aminoacylase domain protein; Amidohydrolase 3; KEGG: amt:Amet_0041 amidohydrolase 3 YP_001918013.1 PFAM: C4-dicarboxylate anaerobic carrier; AbgT putative transporter; KEGG: amt:Amet_0661 C4-dicarboxylate anaerobic carrier YP_001918014.1 TIGRFAM: acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: amt:Amet_0660 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase YP_001918015.1 TIGRFAM: recombination helicase AddA; PFAM: UvrD/REP helicase; KEGG: bcy:Bcer98_0860 recombination helicase AddA YP_001918016.1 TIGRFAM: ATP-dependent nuclease subunit B; KEGG: mta:Moth_0481 ATP-dependent deoxyribonuclease subunit B YP_001918017.1 PFAM: acylphosphatase; KEGG: ecp:ECP_0974 putative acylphosphatase YP_001918018.1 PFAM: copper amine oxidase domain protein; KEGG: cth:Cthe_1258 copper amine oxidase-like protein YP_001918020.1 PFAM: major facilitator superfamily MFS_1; KEGG: drm:Dred_1678 major facilitator superfamily MFS_1 YP_001918021.1 KEGG: bcl:ABC0281 hypothetical protein YP_001918022.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; SMART: Animal peptidoglycan recognition protein PGRP; KEGG: bat:BAS3428 N-acetylmuramoyl-L-alanine amidase, putative YP_001918023.1 modulates transcription in response to the NADH/NAD(+) redox state YP_001918024.1 PFAM: manganese containing catalase; KEGG: cbe:Cbei_4834 catalase YP_001918025.1 KEGG: chy:CHY_1022 hypothetical protein YP_001918026.1 PFAM: Phosphoesterase HXTX; KEGG: ctc:CTC00170 hypothetical protein YP_001918027.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: ctc:CTC01356 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_001918028.1 PFAM: glutamine amidotransferase class-II; asparagine synthase; KEGG: tex:Teth514_2106 asparagine synthase (glutamine-hydrolyzing) YP_001918029.1 KEGG: chy:CHY_0019 hypothetical protein YP_001918030.1 KEGG: ssv:SSU98_2060 hypothetical protein YP_001918031.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper ion binding protein; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: amt:Amet_3272 heavy metal translocating P-type ATPase YP_001918032.1 KEGG: tte:TTE2703 putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation) YP_001918033.1 PFAM: protein of unknown function DUF368; KEGG: amt:Amet_0701 protein of unknown function DUF368 YP_001918034.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP YP_001918035.1 KEGG: csc:Csac_0184 hypothetical protein YP_001918036.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase domain protein; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; KEGG: chy:CHY_1292 3-hydroxybutyryl-CoA dehydrogenase YP_001918037.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: tte:TTE0544 3-hydroxybutyryl-CoA dehydratase YP_001918038.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pth:PTH_2468 retron-type reverse transcriptase YP_001918039.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Electron transfer flavoprotein alpha/beta-subunit ; Electron transfer flavoprotein alpha subunit; KEGG: cbf:CLI_3456 electron transfer flavoprotein, alpha subunit/FixB family protein YP_001918040.1 PFAM: Electron transfer flavoprotein alpha/beta-subunit; KEGG: cbf:CLI_2238 electron transfer flavoprotein, beta subunit/FixA family protein YP_001918041.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase type 2 domain; KEGG: aoe:Clos_0091 acyl-CoA dehydrogenase domain protein YP_001918042.1 PFAM: thioesterase superfamily protein; KEGG: fno:Fnod_0210 acyl-CoA hydrolase YP_001918043.1 KEGG: pgi:PG1069 alcohol dehydrogenase, zinc-containing, putative YP_001918044.1 PFAM: protein of unknown function DUF849; KEGG: fnu:FN1868 hypothetical cytosolic protein YP_001918045.1 KEGG: aoe:Clos_0418 lysine 2,3-aminomutase YodO family protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein YP_001918046.1 PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: amt:Amet_2943 methyl-accepting chemotaxis sensory transducer YP_001918047.1 PFAM: Lytic transglycosylase catalytic; KEGG: swo:Swol_2013 secreted protein YP_001918048.1 KEGG: drm:Dred_1596 dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_001918049.1 TIGRFAM: sporulation protein YtaF; KEGG: bha:BH3151 hypothetical protein YP_001918050.1 KEGG: sth:STH849 formamidopyrimidine-DNA glycosidase; TIGRFAM: formamidopyrimidine-DNA glycosylase; PFAM: zinc finger Fpg domain protein; Formamidopyrimidine-DNA glycosylase catalytic domain protein; Formamidopyrimidine-DNA glycolase, H2TH DNA binding YP_001918051.1 KEGG: bha:BH3153 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease; SMART: Helix-hairpin-helix domain protein class 2 YP_001918052.1 KEGG: drm:Dred_0040 putative transmembrane anti-sigma factor YP_001918053.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: sth:STH845 RNA polymerase ECF-type sigma factor YP_001918054.1 TIGRFAM: peptidase T-like protein; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ctc:CTC00423 peptidase T YP_001918055.1 PFAM: peptidase M16 domain protein; KEGG: cdf:CD2660 probable peptidase YP_001918056.1 PFAM: peptidase M16 domain protein; KEGG: tpd:Teth39_0802 peptidase M16 domain protein YP_001918057.1 PFAM: histidinol dehydrogenase; KEGG: vha:VIBHAR_02554 histidinol dehydrogenase YP_001918058.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: mth:MTH1509 divalent cation tolerance protein YP_001918060.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: swo:Swol_1977 hypothetical protein YP_001918061.1 KEGG: pgi:PG1069 alcohol dehydrogenase, zinc-containing, putative YP_001918062.1 PFAM: protein of unknown function DUF849; KEGG: fno:Fnod_0209 protein of unknown function DUF849 YP_001918063.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: fnu:FN0648 Exoenzyme regulatory protein AepA precursor YP_001918064.1 PFAM: cobalamin B12-binding domain protein; KEGG: aoe:Clos_0422 cobalamin B12-binding domain protein YP_001918065.1 PFAM: D-Lysine 56-aminomutase alpha subunit; KEGG: amt:Amet_4549 D-lysine 5,6-aminomutase alpha subunit YP_001918066.1 KEGG: tte:TTE0724 hypothetical protein YP_001918067.1 KEGG: chy:CHY_1355 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_001918068.1 KEGG: tte:TTE0721 acyl-CoA:acetate CoA transferase beta subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase YP_001918069.1 KEGG: cdf:CD2677 butyrate--acetoacetate CoA-transferase subunit A; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase YP_001918070.1 KEGG: drm:Dred_0399 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase YP_001918071.1 PFAM: Integrase catalytic region; KEGG: tex:Teth514_0755 integrase, catalytic region YP_001918072.1 PFAM: diaminopimelate epimerase; KEGG: chy:CHY_1493 diaminopimelate epimerase YP_001918073.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: tte:TTE0210 diaminopimelate decarboxylase YP_001918074.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: nis:NIS_1061 thiamine biosynthesis protein ThiS YP_001918075.1 PFAM: thiazole biosynthesis family protein; KEGG: cth:Cthe_0598 thiazole synthase YP_001918076.1 TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: Radical SAM domain protein; biotin and thiamin synthesis associated; KEGG: ckl:CKL_1636 ThiH YP_001918077.1 KEGG: cth:Cthe_0601 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_001918078.1 KEGG: tva:TVAG_030630 viral A-type inclusion protein, putative Pfam: Myosin_tail_1 DUF1690 OHCU_decarbox Phe_tRNA-synt_N EzrA HalX DUF827 TBPIP Microtub_assoc DUF465 PspA_IM30 FlaC_arch TPR_MLP1_2 HALZ Vicilin_N Tropomyosin Prefoldin_2 Nnf1 ATG16 GRIP PROSITE: ASN_RICH GLU_RICH LYS_RICH YP_001918080.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: amt:Amet_4646 nitrate reductase YP_001918081.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pth:PTH_2468 retron-type reverse transcriptase YP_001918082.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: swo:Swol_1977 hypothetical protein YP_001918083.1 PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: swo:Swol_2400 response regulator receiver protein YP_001918084.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: drm:Dred_2829 transposase IS116/IS110/IS902 family protein YP_001918085.1 PFAM: Ankyrin; KEGG: fps:FP2172 hypothetical protein YP_001918086.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: amt:Amet_1653 ABC transporter related YP_001918087.1 PFAM: cobalt transport protein; KEGG: amt:Amet_1652 cobalt transport protein YP_001918088.1 KEGG: amt:Amet_1651 ABC-type Co2+ transport system permease component-like protein YP_001918089.1 PFAM: ferric-uptake regulator; KEGG: mfa:Mfla_1233 ferric uptake regulator, FUR family YP_001918090.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: swo:Swol_1198 histidinol-phosphate aminotransferase YP_001918091.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: bur:Bcep18194_C6721 hypothetical protein YP_001918092.1 PFAM: alanine racemase domain protein; KEGG: vei:Veis_3378 alanine racemase domain protein YP_001918093.1 PFAM: Amidohydrolase 3; KEGG: rrs:RoseRS_2426 amidohydrolase 3 YP_001918095.1 PFAM: regulatory protein TetR; KEGG: ctc:CTC00079 transcriptional regulator, TetR family YP_001918096.1 PFAM: acriflavin resistance protein; KEGG: mta:Moth_2369 acriflavin resistance protein YP_001918097.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: hmo:HM1_0227 HlyD family secretion protein, putative YP_001918098.1 KEGG: tva:TVAG_139760 viral A-type inclusion protein, putative Pfam: Myosin_tail_1 Pox_A_type_inc TBPIP bZIP_Maf Filament ATG16 Rab5-bind Laminin_I DUF904 Microtub_assoc CDC37_N Syntaxin HalX Spectrin BRE1 Prefoldin_2 PROSITE: GLU_RICH YP_001918100.1 PFAM: regulatory protein TetR; KEGG: mta:Moth_2368 transcriptional regulator, TetR family YP_001918101.1 PFAM: acriflavin resistance protein; KEGG: amt:Amet_0188 acriflavin resistance protein YP_001918102.1 TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: secretion protein HlyD family protein; KEGG: cbe:Cbei_2702 efflux transporter, RND family, MFP subunit YP_001918103.1 PFAM: Integrase catalytic region; KEGG: tpd:Teth39_0240 integrase, catalytic region YP_001918104.1 KEGG: rno:691331 hypothetical protein LOC691331 YP_001918105.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia YP_001918106.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal YP_001918107.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: sth:STH345 putative phosphoesterase YP_001918108.1 TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: drm:Dred_2683 non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family YP_001918109.1 TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2; KEGG: btl:BALH_4073 ribonuclease PH YP_001918110.1 KEGG: drm:Dred_2685 hypothetical protein YP_001918111.1 PFAM: Chloride channel core; KEGG: amt:Amet_4519 chloride channel, core YP_001918112.1 KEGG: aoe:Clos_0556 conserved hypothetical protein YP_001918113.1 KEGG: dsy:DSY3234 hypothetical protein YP_001918114.1 PFAM: regulatory protein MarR; KEGG: amt:Amet_3151 transcriptional regulator, MarR family YP_001918115.1 PFAM: protein of unknown function DUF441; KEGG: mta:Moth_0120 protein of unknown function DUF441 YP_001918116.1 PFAM: conserved hypothetical protein; KEGG: rde:RD1_2920 hypothetical protein YP_001918117.1 KEGG: fnu:FN2104 hypothetical protein YP_001918118.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: rde:RD1_2922 integral membrane protein, putative YP_001918120.1 TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: dol:Dole_1266 2'-5' RNA ligase YP_001918121.1 KEGG: cbe:Cbei_2949 uncharacterized conserved protein, CotF B.subtilis family YP_001918122.1 PFAM: Coat F domain protein; KEGG: chy:CHY_2473 hypothetical protein YP_001918123.1 PFAM: Spermine synthase; KEGG: bha:BH1914 hypothetical protein YP_001918124.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mma:MM_0221 Fe-S oxidoreductase YP_001918125.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S9A prolyl oligopeptidase domain protein beta-propeller; KEGG: ana:all2533 prolyl endopeptidase YP_001918126.1 KEGG: amt:Amet_4422 hypothetical protein YP_001918127.1 PFAM: Linocin_M18 bacteriocin protein; KEGG: amt:Amet_4421 Linocin_M18 bacteriocin protein YP_001918128.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase; KEGG: tpd:Teth39_1200 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut YP_001918129.1 PFAM: protein of unknown function YGGT; KEGG: hmo:HM1_2092 YGGT family protein, putative YP_001918130.1 KEGG: cac:CAC2598 uncharacterized protein, homolog of YwsA B.subtilis YP_001918131.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: amt:Amet_2322 amino acid carrier protein YP_001918132.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; response regulator receiver; KEGG: noc:Noc_0847 two component diguanylate cyclase YP_001918133.1 PFAM: glutamate--cysteine ligase; KEGG: cpr:CPR_1545 putative glutamate--cysteine ligase/putative amino acid ligase YP_001918134.1 KEGG: pca:Pcar_3040 hypothetical protein YP_001918135.1 PFAM: transposase IS3/IS911 family protein; KEGG: bcy:Bcer98_2284 transposase IS3/IS911 family protein YP_001918139.1 SMART: AAA ATPase; KEGG: bce:BC5110 hypothetical ATP-binding protein YP_001918140.1 PFAM: Integrase catalytic region; TnsA endonuclease; KEGG: ava:Ava_C0193 integrase, catalytic region YP_001918141.1 PFAM: transposase IS3/IS911 family protein; KEGG: bcy:Bcer98_2284 transposase IS3/IS911 family protein YP_001918142.1 KEGG: tet:TTHERM_01284820 hypothetical protein Pfam: Phage_QLRG PROSITE: GLN_RICH LYS_RICH YP_001918145.1 PFAM: protein of unknown function DUF55; KEGG: mmq:MmarC5_0611 protein of unknown function DUF55 YP_001918146.1 PFAM: restriction modification system DNA specificity domain; KEGG: gtn:GTNG_0763 putative type I specificity subunit HsdS YP_001918147.1 PFAM: putative RNA methylase; N-6 DNA methylase; KEGG: gtn:GTNG_0762 type I restriction enzyme StySPI M protein YP_001918148.1 restriction endonuclease; the EcoKI enzyme recognizes 5'-AACN(6)GTGC-3'; subunit R is required for both nuclease and ATPase activities YP_001918149.1 TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: gtn:GTNG_2997 tmRNA-binding protein YP_001918150.1 TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; KEGG: sth:STH2574 histidinol-phosphatase YP_001918151.1 TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-AMP cyclohydrolase; phosphoribosyl-ATP pyrophosphohydrolase; KEGG: bpu:BPUM_3121 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase YP_001918152.1 TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein; KEGG: aae:aq_181 imidazoleglycerol-phosphate synthase cyclase YP_001918153.1 KEGG: swo:Swol_1766 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imid azole-4-carboxamideisomerase; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: histidine biosynthesis protein YP_001918154.1 TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; CobB/CobQ domain protein glutamine amidotransferase; KEGG: bha:BH3580 imidazole glycerol phosphate synthase subunit HisH YP_001918155.1 PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: csc:Csac_2023 imidazoleglycerol-phosphate dehydratase YP_001918156.1 KEGG: gme:Gmet_0383 ATP phosphoribosyltransferase catalytic subunit; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region YP_001918157.1 PFAM: tRNA synthetase class II (G H P and S); KEGG: hmo:HM1_3053 histidyl-tRNA synthetase YP_001918158.1 PFAM: phosphoglucose isomerase (PGI); KEGG: cac:CAC2680 glucose-6-phosphate isomerase YP_001918159.1 KEGG: bpu:BPUM_2562 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase YP_001918160.1 PFAM: ROK family protein; KEGG: bha:BH1425 glucose kinase YP_001918161.1 PFAM: FMN-binding domain protein; KEGG: aoe:Clos_2103 FMN-binding domain protein YP_001918164.1 PFAM: FMN-binding domain protein; KEGG: dsy:DSY1058 hypothetical protein YP_001918165.1 KEGG: gka:GK3044 ribonuclease R; TIGRFAM: VacB and RNase II family 3'-5' exoribonuclease; ribonuclease R; PFAM: ribonuclease II; RNA binding S1 domain protein; Ribonuclease B OB region domain; SMART: Cold shock protein YP_001918166.1 KEGG: chy:CHY_0288 HDIG domain protein; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_001918167.1 KEGG: swo:Swol_0278 putative esterase/lipase YP_001918168.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient YP_001918169.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: pth:PTH_2717 hypothetical membrane protein YP_001918170.1 PFAM: enolase; KEGG: drm:Dred_2987 phosphopyruvate hydratase YP_001918171.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate YP_001918172.1 PFAM: triosephosphate isomerase; KEGG: ser:SERP0444 triosephosphate isomerase YP_001918173.1 PFAM: phosphoglycerate kinase; KEGG: chy:CHY_0281 phosphoglycerate kinase YP_001918174.1 PFAM: putative sugar-binding domain protein; KEGG: ctc:CTC00377 putative central glycolytic genes regulator YP_001918175.1 TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 factor; sigma-54 factor core-binding region; sigma-54 DNA-binding domain protein; KEGG: pth:PTH_2724 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog YP_001918176.1 PFAM: protein of unknown function DUF199; KEGG: amt:Amet_4088 protein of unknown function DUF199 YP_001918177.1 tryptophan indole-lyase; catalyzes the formation of indole and pyruvate from tryptophan YP_001918178.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: pth:PTH_2728 hypothetical protein YP_001918179.1 PFAM: conserved hypothetical protein; KEGG: cac:CAC0511 predicted P-loop containing kinase, similar to B.subtilis YvcJ YP_001918180.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: tte:TTE1835 histidinol phosphatase and related hydrolase of the PHP family YP_001918181.1 PFAM: von Willebrand factor type A; KEGG: swo:Swol_0446 Mg-chelatase subunit ChlD-like protein YP_001918182.1 SMART: AAA ATPase; KEGG: sth:STH2441 putative chelatase YP_001918183.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: tpd:Teth39_0577 PHP C-terminal domain protein YP_001918184.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: pmo:Pmob_1522 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_001918185.1 PFAM: protein of unknown function DUF296; KEGG: tte:TTE0283 predicted DNA-binding proteins with PD1-like DNA-binding motif YP_001918186.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: drm:Dred_1257 FMN-dependent alpha-hydroxy acid dehydrogenase YP_001918187.1 TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3; KEGG: drm:Dred_3056 Cof-like hydrolase YP_001918188.1 PFAM: glycosyl transferase family 51; KEGG: chy:CHY_1635 penicillin-binding protein, 1A family YP_001918189.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; KEGG: drm:Dred_0698 putative transcriptional regulator, Crp/Fnr family YP_001918190.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: Excinuclease ABC C subunit domain protein; excinuclease ABC C subunit domain protein; UvrB/UvrC protein; KEGG: hmo:HM1_1301 excinuclease ABC, C subunit YP_001918191.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: gtn:GTNG_3035 excinuclease ABC subunit A YP_001918192.1 KEGG: bld:BLi03759 excinuclease ABC subunit B; TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; UvrB/UvrC protein; type III restriction protein res subunit; SMART: DEAD-like helicases YP_001918193.1 KEGG: rno:686385 hypothetical protein LOC686385 YP_001918194.1 KEGG: tva:TVAG_238370 viral A-type inclusion protein, putative Pfam: Transposase_8 HrpB7 LMP Osmo_CC Snf7 ATG16 Baculo_PEP_C Myosin_tail_1 DUF869 CHASE3 PspA_IM30 FlaC_arch Filament HSA TPR_MLP1_2 Fez1 DUF827 DUF593 Seryl_tRNA_N Tropomyosin Prefoldin_2 MbeD_MobD Rab5-bind DivIC bZIP_2 YP_001918195.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: cth:Cthe_0343 flavin reductase-like, FMN-binding YP_001918196.1 PFAM: TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: cac:CAC0324 TPR repeats containing protein YP_001918197.1 KEGG: bbu:BB0796 hypothetical protein YP_001918198.1 KEGG: sat:SYN_00516 hypothetical membrane protein YP_001918199.1 PFAM: protein of unknown function DUF151; KEGG: tpd:Teth39_1531 protein of unknown function DUF151 YP_001918200.1 PFAM: SurA domain; KEGG: amt:Amet_0798 hypothetical protein YP_001918201.1 KEGG: oih:OB2944 glycine betaine ABC transporter ATP-binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: CBS domain containing protein; ABC transporter related; SMART: AAA ATPase YP_001918202.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oih:OB2943 ABC transporter permease YP_001918203.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: oih:OB2942 ABC transporter substrate-binding protein YP_001918204.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: csc:Csac_2697 histidinol-phosphate aminotransferase YP_001918205.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: tpd:Teth39_0984 phospho-2-dehydro-3-deoxyheptonate aldolase YP_001918206.1 PFAM: Prephenate dehydrogenase; KEGG: bpu:BPUM_1992 prephenate dehydrogenase YP_001918207.1 KEGG: drm:Dred_1151 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_001918208.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: csa:Csal_2457 substrate-binding region of ABC-type glycine betaine transport system YP_001918209.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: bld:BLi03269 GbsB YP_001918210.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: chy:CHY_0789 aldehyde ferredoxin oxidoreductase, tungsten-containing YP_001918211.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: pab:PAB2084 electron transport protein YP_001918212.1 KEGG: bay:RBAM_028170 YuaC YP_001918213.1 KEGG: gka:GK1842 hypothetical protein YP_001918214.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: dsy:DSY0508 hypothetical protein YP_001918215.1 KEGG: chy:CHY_0159 hypothetical protein YP_001918216.1 PFAM: copper amine oxidase domain protein; SMART: chitinase II; KEGG: tte:TTE2668 hypothetical protein YP_001918217.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: cth:Cthe_1809 RNA polymerase, sigma-24 subunit, ECF subfamily YP_001918218.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: bha:BH2189 hypothetical protein YP_001918219.1 PFAM: Peptidoglycan-binding LysM; polysaccharide deacetylase; KEGG: amt:Amet_4252 polysaccharide deacetylase YP_001918220.1 KEGG: bha:BH0621 hypothetical protein YP_001918221.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: bpu:BPUM_1723 possible threonine synthase YP_001918222.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: swo:Swol_1977 hypothetical protein YP_001918223.1 KEGG: pth:PTH_2836 hypothetical protein YP_001918224.1 KEGG: pth:PTH_1935 membrane carboxypeptidase; TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_001918225.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: sus:Acid_1799 phenazine biosynthesis protein PhzF family YP_001918226.1 KEGG: tte:TTE0678 pyrrolidone-carboxylate peptidase; TIGRFAM: pyrrolidone-carboxylate peptidase; PFAM: peptidase C15 pyroglutamyl peptidase I YP_001918227.1 PFAM: integrase family protein; KEGG: sru:SRU_p0011 site-specific recombinase, phage integrase family, truncation YP_001918228.1 PFAM: major facilitator superfamily MFS_1; KEGG: dde:Dde_3053 sugar phosphate permease-like YP_001918229.1 KEGG: ckl:CKL_3364 hypothetical protein YP_001918230.1 KEGG: sfu:Sfum_0396 hydrolase (HAD superfamily) YP_001918232.1 PFAM: transport-associated; SMART: Transport-associated and nodulation region; KEGG: chy:CHY_0056 putative osmotically inducible protein YP_001918233.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: pth:PTH_2396 transposase and inactivated derivatives YP_001918234.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: bha:BH1200 two-component response regulator YP_001918235.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: bcy:Bcer98_1159 integral membrane sensor signal transduction histidine kinase YP_001918236.1 KEGG: bsu:BSU33100 hypothetical protein YP_001918237.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: dsy:DSY4807 hypothetical protein YP_001918238.1 PFAM: protein of unknown function DUF214; KEGG: dsy:DSY4806 hypothetical protein YP_001918239.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aoe:Clos_2619 ABC transporter related YP_001918240.1 PFAM: regulatory protein TetR; KEGG: sth:STH3273 TetR family transcriptional regulator YP_001918242.1 PFAM: Rubrerythrin; Ferritin Dps family protein; KEGG: dde:Dde_0133 bacterioferritin YP_001918245.1 PFAM: peptidase A24A prepilin type IV; peptidase A24A domain protein; KEGG: oih:OB0617 leader peptide processing enzyme YP_001918246.1 KEGG: aoe:Clos_0607 hypothetical protein YP_001918247.1 KEGG: sfu:Sfum_2553 type II secretory pathway component PulJ-like YP_001918248.1 KEGG: tpd:Teth39_1073 hypothetical protein YP_001918249.1 KEGG: deb:DehaBAV1_1172 hypothetical protein YP_001918250.1 KEGG: cdf:CD3513 pilin YP_001918251.1 KEGG: cbh:CLC_1020 hypothetical protein YP_001918252.1 PFAM: copper amine oxidase domain protein; KEGG: hmo:HM1_2683 peptidyl-prolyl cis-trans isomerase, cyclophilin-type YP_001918253.1 KEGG: tte:TTE1274 fimbrial assembly protein YP_001918254.1 PFAM: Fimbrial assembly family protein; KEGG: gur:Gura_1811 fimbrial assembly family protein YP_001918255.1 TIGRFAM: type IV pilus assembly protein PilM; KEGG: ade:Adeh_0641 type IV pilus assembly protein PilM YP_001918256.1 PFAM: type II secretion system protein; KEGG: chy:CHY_0632 type IV pilus assembly protein PilC YP_001918257.1 KEGG: tpd:Teth39_1068 twitching motility protein; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; SMART: AAA ATPase YP_001918258.1 PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: tpd:Teth39_1067 type II secretion system protein E YP_001918260.1 PFAM: protein of unknown function DUF58; KEGG: pab:PAB0849 hypothetical protein YP_001918261.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: pfu:PF0517 methanol dehydrogenase regulatory protein YP_001918263.1 KEGG: rno:170913 ATP-binding cassette, sub-family B (MDR/TAP), member 1A YP_001918264.1 PFAM: class II aldolase/adducin family protein; KEGG: pmo:Pmob_0642 class II aldolase/adducin family protein YP_001918265.1 KEGG: swo:Swol_2483 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; metal-dependent phosphohydrolase HD region YP_001918266.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: tpd:Teth39_1718 xanthine/uracil/vitamin C permease YP_001918267.1 PFAM: peptidase M20; peptidase M28; KEGG: amt:Amet_3539 peptidase M28 YP_001918268.1 KEGG: rno:685371 hypothetical protein LOC685371 YP_001918269.1 TIGRFAM: methyltransferase FkbM family; KEGG: fjo:Fjoh_0324 methyltransferase FkbM family YP_001918270.1 PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: amt:Amet_1491 protein of unknown function DUF405 YP_001918271.1 TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: sth:STH714 hypothetical protein YP_001918272.1 TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: FMN-binding domain protein; KEGG: aoe:Clos_0273 FMN-binding domain protein YP_001918273.1 PFAM: DNA methylase N-4/N-6 domain protein; KEGG: mhu:Mhun_0884 DNA methylase N-4/N-6 YP_001918274.1 PFAM: copper amine oxidase domain protein; Peptidase M23; KEGG: sth:STH3311 putative metalloendopeptidase YP_001918275.1 PFAM: beta-lactamase domain protein; copper amine oxidase domain protein; KEGG: hha:Hhal_1314 beta-lactamase domain protein YP_001918276.1 KEGG: amt:Amet_0292 hypothetical protein YP_001918277.1 KEGG: mpe:MYPE6470 DNA topoisomerase IV subunit A YP_001918278.1 PFAM: protein of unknown function DUF523; KEGG: cno:NT01CX_1774 hypothetical protein YP_001918279.1 KEGG: amt:Amet_0527 metal dependent phosphohydrolase; TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_001918280.1 KEGG: hau:Haur_3629 hypothetical protein YP_001918281.1 PFAM: nitroreductase; KEGG: gur:Gura_1344 nitroreductase YP_001918282.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: cpf:CPF_1874 cation efflux family protein YP_001918283.1 PFAM: regulatory protein TetR; KEGG: bsu:BSU34480 hypothetical protein YP_001918284.1 KEGG: amt:Amet_0744 hypothetical protein YP_001918285.1 PFAM: transposase IS3/IS911 family protein; KEGG: bcy:Bcer98_2284 transposase IS3/IS911 family protein YP_001918286.1 PFAM: Radical SAM domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: cpy:Cphy_3616 radical SAM domain protein YP_001918287.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: tte:TTE0270 peroxiredoxin YP_001918288.1 PFAM: glucose-inhibited division protein A; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cbh:CLC_3377 oxidoreductase, pyridine nucleotide-disulphide family YP_001918289.1 TIGRFAM: signal peptidase I; PFAM: peptidase S24 and S26 domain protein; KEGG: cth:Cthe_2079 signal peptidase I YP_001918290.1 PFAM: Radical SAM domain protein; KEGG: mbu:Mbur_2404 Fe-S protein, radical SAM family YP_001918291.1 KEGG: cbh:CLC_1358 helicase, UvrD/REP/exonuclease family protein; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: UvrD/REP helicase; Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease YP_001918292.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: mta:Moth_2263 metal dependent phosphohydrolase YP_001918293.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: sat:SYN_00402 deoxyribodipyrimidine photolyase YP_001918294.1 PFAM: protein of unknown function DUF523; Protein of unknown function DUF1722; KEGG: bce:BC2482 hypothetical cytosolic protein YP_001918295.1 PFAM: DNA mismatch repair protein MutS domain protein; KEGG: amt:Amet_4672 DNA mismatch repair protein MutS domain protein YP_001918296.1 PFAM: response regulator receiver; LytTr DNA-binding region; KEGG: swo:Swol_2400 response regulator receiver protein YP_001918297.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; proteinase inhibitor I9 subtilisin propeptide; KEGG: bld:BLi01109 subtilisin carlsberg precursor YP_001918298.1 PFAM: TatD-related deoxyribonuclease; amidohydrolase; Amidohydrolase 3; KEGG: mag:amb1486 adenine deaminase YP_001918299.1 PFAM: protein of unknown function DUF1185; KEGG: mag:amb1479 hypothetical protein YP_001918300.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: drm:Dred_2829 transposase IS116/IS110/IS902 family protein YP_001918301.1 KEGG: bxe:Bxe_B0655 hypothetical protein YP_001918302.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rpb:RPB_1667 hypothetical protein YP_001918303.1 KEGG: cdf:CD2256 putative PTS system, EIIc component YP_001918304.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mta:Moth_1225 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding YP_001918305.1 PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: mta:Moth_1226 aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead YP_001918306.1 PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: pmo:Pmob_1739 (2Fe-2S)-binding domain protein YP_001918307.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: chy:CHY_0690 carbon monoxide dehydrogenase, medium subunit YP_001918308.1 KEGG: bbr:BB0718 carboxyvinyl-carboxyphosphonate phosphorylmutase YP_001918309.1 KEGG: ctc:CTC02567 glutamate mutase, MutL YP_001918310.1 PFAM: protein of unknown function DUF453; KEGG: bcl:ABC0623 hypothetical protein YP_001918311.1 PFAM: cobalamin B12-binding domain protein; KEGG: sth:STH2465 methylmalonyl-CoA mutase C-terminal domain YP_001918312.1 TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: pfu:PF0939 3-isopropylmalate dehydratase small subunit YP_001918313.1 KEGG: mka:MK1440 3-isopropylmalate dehydratase large subunit; TIGRFAM: homoaconitate hydratase family protein; 3-isopropylmalate dehydratase; PFAM: aconitate hydratase domain protein YP_001918314.1 KEGG: lpl:lp_0506 L-serine dehydratase, alpha subunit YP_001918315.1 PFAM: 6-phosphogluconate dehydrogenase NAD-binding; KEGG: asu:Asuc_1858 2-hydroxy-3-oxopropionate reductase YP_001918316.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: drm:Dred_0346 sigma54 specific transcriptional regulator, fis family YP_001918317.1 PFAM: Na+/solute symporter; KEGG: pth:PTH_2851 Na+/proline symporter YP_001918318.1 PFAM: ThiJ/PfpI domain protein; KEGG: amt:Amet_1453 ThiJ/PfpI domain protein YP_001918319.1 PFAM: Ferritin Dps family protein; KEGG: sth:STH866 putative starvation induced DNA binding protein YP_001918321.1 PFAM: protein of unknown function DUF218; KEGG: bcy:Bcer98_2067 protein of unknown function DUF218 YP_001918322.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; Methyltransferase type 11; Methyltransferase type 12; Tellurite resistance methyltransferase, TehB, core; KEGG: sfu:Sfum_3563 methyltransferase type 11 YP_001918323.1 KEGG: gsu:GSU0751 hypothetical protein YP_001918324.1 PFAM: GTP-binding protein HSR1-related; TGS domain protein; KEGG: pth:PTH_0469 hypothetical protein YP_001918326.1 KEGG: nve:NEMVE_v1g108333 predicted protein Pfam: TAS2R DUF1300 7tm_4 7tm_1 PROSITE: G_PROTEIN_RECEP_F1_1 G_PROTEIN_RECEP_F1_2 YP_001918327.1 KEGG: dsy:DSY4223 hypothetical protein YP_001918328.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: hmo:HM1_0086 YbaK/prolyl-tRNA synthetase associated region YP_001918329.1 KEGG: mmu:100043442 similar to reproductive homeobox on X chromosome 8 YP_001918330.1 PFAM: GCN5-related N-acetyltransferase; KEGG: pmo:Pmob_1177 GCN5-related N-acetyltransferase YP_001918331.1 KEGG: aoe:Clos_0581 hypothetical protein YP_001918332.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: aoe:Clos_1036 alkylhydroperoxidase like protein, AhpD family YP_001918333.1 PFAM: Integrase catalytic region; KEGG: tex:Teth514_0755 integrase, catalytic region YP_001918334.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: aoe:Clos_1037 dihydrolipoamide dehydrogenase YP_001918335.1 PFAM: CBS domain containing protein; sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: cbf:CLI_2550 sensory box sigma-54 dependent transcriptional regulator YP_001918336.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: amt:Amet_0940 methyl-accepting chemotaxis sensory transducer YP_001918337.1 KEGG: amt:Amet_1886 N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin; copper amine oxidase domain protein; SH3 type 3 domain protein; SMART: SH3 domain protein YP_001918338.1 TIGRFAM: lipoyltransferase and lipoate-protein ligase; PFAM: biotin/lipoate A/B protein ligase; KEGG: bpu:BPUM_0968 lipoate--protein ligase YP_001918339.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: swo:Swol_1977 hypothetical protein YP_001918340.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: amt:Amet_0582 methyl-accepting chemotaxis sensory transducer YP_001918341.1 KEGG: amt:Amet_3483 diguanylate cyclase and metal dependent phosphohydrolase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; SMART: PAS domain containing protein; metal-dependent phosphohydrolase HD region YP_001918342.1 PFAM: protein of unknown function DUF885; KEGG: sus:Acid_4336 protein of unknown function DUF885 YP_001918343.1 KEGG: dsy:DSY4424 hypothetical protein YP_001918344.1 KEGG: chy:CHY_1799 hypothetical protein YP_001918345.1 PFAM: beta-lactamase domain protein; KEGG: tle:Tlet_1564 beta-lactamase domain protein YP_001918346.1 SMART: PDZ/DHR/GLGF domain protein; KEGG: tte:TTE1973 trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain YP_001918347.1 KEGG: oih:OB2490 carboxy-terminal processing protease; TIGRFAM: carboxyl-terminal protease; PFAM: PDZ/DHR/GLGF domain protein; Peptidoglycan-binding domain 1 protein; peptidase S41 YP_001918348.1 PFAM: Peptidase M23; KEGG: aoe:Clos_2260 peptidase M23B YP_001918349.1 PFAM: protein of unknown function DUF214; KEGG: bsu:BSU35250 cell-division protein YP_001918350.1 KEGG: cpf:CPF_0296 putative cell division ATP-binding protein FtsE; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase YP_001918351.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amt:Amet_3330 binding-protein-dependent transport systems inner membrane component YP_001918352.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amt:Amet_3329 binding-protein-dependent transport systems inner membrane component YP_001918353.1 KEGG: amt:Amet_3328 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001918354.1 KEGG: amt:Amet_3327 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001918355.1 PFAM: extracellular solute-binding protein family 5; KEGG: amt:Amet_3331 extracellular solute-binding protein, family 5 YP_001918356.1 PFAM: regulatory protein LysR; KEGG: wsu:WS0837 hypothetical protein YP_001918357.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; KEGG: mta:Moth_0689 putative PAS/PAC sensor protein YP_001918358.1 KEGG: tva:TVAG_102500 Adenylate and Guanylate cyclase catalytic domain containing protein Pfam: PAS Guanylate_cyc PROSITE: CPSASE_2 GUANYLATE_CYCLASES_2 YP_001918359.1 KEGG: gme:Gmet_2140 conserved hypothetical protein, possibly involved in molybdenum cofactor biosynthesis YP_001918360.1 KEGG: ppr:PBPRA1986 hypothetical protein YP_001918361.1 TIGRFAM: NifC-like ABC-type porter; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mmp:MMP0506 molybdenum transport system permease protein, modB related YP_001918362.1 KEGG: mem:Memar_1884 molybdenum ABC transporter, periplasmic molybdate-binding protein YP_001918363.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pca:Pcar_0231 ABC-type transport system, ATPase component YP_001918364.1 KEGG: mta:Moth_2002 biotin/lipoyl attachment YP_001918365.1 PFAM: protein of unknown function DUF182; KEGG: cbh:CLC_2790 putative xanthine dehydrogenase accessory factor YP_001918366.1 PFAM: molybdopterin binding domain; KEGG: pth:PTH_1550 molybdopterin biosynthesis enzyme YP_001918367.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: chy:CHY_0166 putative transketolase, C-terminal subunit YP_001918368.1 PFAM: Transketolase domain protein; KEGG: tpd:Teth39_0491 transketolase domain protein YP_001918369.1 PFAM: protein of unknown function DUF161; KEGG: mta:Moth_0235 protein of unknown function DUF161 YP_001918370.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: lmf:LMOf2365_2482 peptide chain release factor 2, programmed frameshift YP_001918372.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: helicase domain protein; SEC-C motif domain protein; SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; KEGG: hmo:HM1_1266 preprotein translocase, SecA subunit YP_001918374.1 KEGG: sth:STH124 hypothetical protein YP_001918375.1 PFAM: peptidase S58 DmpA; KEGG: tte:TTE1796 L-aminopeptidase/D-esterase YP_001918376.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: pth:PTH_2754 ribosome-associated protein Y YP_001918377.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bcl:ABC3070 cold shock protein CspC YP_001918378.1 KEGG: amt:Amet_3483 diguanylate cyclase and metal dependent phosphohydrolase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; metal-dependent phosphohydrolase HD region YP_001918379.1 PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; KEGG: sth:STH2977 flagellar hook-associated protein YP_001918380.1 KEGG: oih:OB2914 hypothetical protein YP_001918381.1 KEGG: aoe:Clos_2488 FlgN family protein YP_001918382.1 PFAM: flagellar protein FliS; KEGG: cdf:CD0235 flagellar protein FliS YP_001918383.1 PFAM: flagellar hook-associated protein 2 domain protein; flagellar hook-associated 2 domain protein; KEGG: oih:OB2501 flagellar hook-associated protein 2 YP_001918384.1 PFAM: flagellar protein FlaG protein; KEGG: amt:Amet_0784 flagellar protein FlaG protein YP_001918385.1 PFAM: flagellin domain protein; KEGG: amt:Amet_0732 flagellin domain protein YP_001918386.1 affects carbohydrate metabolism; has regulatory role in many processes YP_001918387.1 binds to flagellin and appears to stabilize flagellin during flagella assembly YP_001918388.1 KEGG: gka:GK3135 hypothetical protein YP_001918389.1 TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: mta:Moth_0747 flagellar hook-associated protein FlgL YP_001918390.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: pth:PTH_2112 flagellar hook-associated protein YP_001918391.1 KEGG: amt:Amet_0726 hypothetical protein YP_001918392.1 KEGG: cpy:Cphy_0303 anti-sigma-28 factor, FlgM YP_001918393.1 KEGG: tte:TTE0491 flagellar protein YP_001918394.1 KEGG: deh:cbdb_A1311 general secretion family protein YP_001918395.1 PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: dsy:DSY0984 hypothetical protein YP_001918396.1 PFAM: Na+/H+ antiporter NhaC; KEGG: ctc:CTC02529 Na+/H+ antiporter YP_001918397.1 PFAM: Integrase catalytic region; KEGG: tex:Teth514_0755 integrase, catalytic region YP_001918398.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: ctc:CTC00409 putative glutamate racemase YP_001918399.1 KEGG: sth:STH832 cystathionine gamma-lyase; TIGRFAM: methionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_001918400.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: gur:Gura_2536 major facilitator superfamily MFS_1 YP_001918401.1 KEGG: tle:Tlet_1555 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase YP_001918402.1 KEGG: tte:TTE0720 acyl-CoA:acetate CoA transferase alpha subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase YP_001918403.1 PFAM: short chain fatty acid transporter; KEGG: pcr:Pcryo_0888 short chain fatty acid transporter YP_001918404.1 KEGG: swo:Swol_1487 sigma-L-dependent transcriptional regulator; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase YP_001918405.1 PFAM: O-antigen polymerase; KEGG: tte:TTE0644 TPR-repeat-containing proteins YP_001918406.1 KEGG: cth:Cthe_2168 propeptide, PepSY amd peptidase M4 YP_001918407.1 PFAM: S-layer domain protein; KEGG: amt:Amet_1492 hypothetical protein YP_001918408.1 PFAM: protein of unknown function DUF554; KEGG: amt:Amet_0832 protein of unknown function DUF554 YP_001918409.1 KEGG: cpe:CPE0462 capsular polysaccharide biosynthesis protein YP_001918410.1 KEGG: pfa:PFE0465c RNA polymerase I YP_001918411.1 KEGG: tte:TTE0490 predicted amidophosphoribosyltransferase YP_001918412.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: cno:NT01CX_0894 DegV family protein YP_001918413.1 PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: oih:OB2517 late competence protein required for DNA uptake YP_001918414.1 KEGG: csc:Csac_0202 hypothetical protein YP_001918415.1 PFAM: glutamine amidotransferase class-I; peptidase C26; KEGG: oih:OB0725 hypothetical protein YP_001918416.1 TIGRFAM: small GTP-binding protein; GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: pth:PTH_2120 GTPase YP_001918418.1 PFAM: chemotaxis sensory transducer; Heme NO binding domain protein; KEGG: amt:Amet_1187 methyl-accepting chemotaxis sensory transducer YP_001918419.1 PFAM: conserved hypothetical protein; KEGG: amt:Amet_0949 conserved hypothetical protein 374 YP_001918420.1 PFAM: protein of unknown function DUF322; KEGG: tpd:Teth39_1096 protein of unknown function DUF322 YP_001918421.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: amt:Amet_1002 methyltransferase type 12 YP_001918422.1 KEGG: aoe:Clos_1032 split soret cytochrome c precursor YP_001918423.1 PFAM: Integrase catalytic region; KEGG: pth:PTH_2713 hypothetical protein YP_001918424.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: pth:PTH_0733 glutamine synthetase YP_001918425.1 KEGG: cbh:CLC_3354 hypothetical protein YP_001918426.1 KEGG: ctc:CTC00422 hypothetical protein YP_001918427.1 PFAM: protein of unknown function DUF988; KEGG: amt:Amet_0013 protein of unknown function DUF988 YP_001918428.1 PFAM: protein of unknown function DUF1540; KEGG: cth:Cthe_3071 protein of unknown function DUF1540 YP_001918429.1 PFAM: protein of unknown function DUF88; KEGG: hmo:HM1_0800 hypothetical protein YP_001918430.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: dsy:DSY3978 hypothetical protein YP_001918431.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: aoe:Clos_0569 formate dehydrogenase family accessory protein FdhD YP_001918432.1 KEGG: aoe:Clos_2145 conserved hypothetical protein YP_001918433.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: aoe:Clos_2140 aldehyde ferredoxin oxidoreductase YP_001918434.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sfu:Sfum_1079 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001918435.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: amt:Amet_0993 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001918436.1 PFAM: trigger factor domain protein; KEGG: chy:CHY_0324 trigger factor YP_001918437.1 PFAM: Methyltransferase type 11; KEGG: scl:sce9032 methyltransferase YP_001918438.1 KEGG: cth:Cthe_1229 spore germination protein-like protein YP_001918439.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rci:RCIX664 ABC-type transport system, permease component YP_001918440.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mae:Maeo_0471 ABC transporter related YP_001918441.1 PFAM: copper amine oxidase domain protein; KEGG: cth:Cthe_2623 exopolysaccharide biosynthesis protein YP_001918442.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: btk:BT9727_2430 possible PAP2 family protein YP_001918443.1 KEGG: cbf:CLI_0552 hypothetical protein YP_001918444.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: csc:Csac_2481 methyltransferase type 11 YP_001918445.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: amt:Amet_1211 MATE efflux family protein YP_001918446.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: amt:Amet_1373 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001918447.1 KEGG: pfa:PFE0440w hypothetical protein YP_001918448.1 KEGG: pla:Plav_0314 hypothetical protein YP_001918449.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: amt:Amet_3016 MATE efflux family protein YP_001918450.1 PFAM: Lytic transglycosylase catalytic; KEGG: bay:RBAM_011580 YjbJ YP_001918451.1 KEGG: cac:CAC1831 protein containing Zn-finger domain YP_001918452.1 PFAM: polysaccharide deacetylase; copper amine oxidase domain protein; KEGG: hmo:HM1_2361 polysaccharide deacetylase, putative YP_001918453.1 PFAM: SNARE associated Golgi protein; KEGG: cpr:CPR_1585 uncharacterized conserved protein, YdjX/UPF0043 family YP_001918454.1 KEGG: tbr:Tb927.4.3740 hypothetical protein, conserved YP_001918457.1 TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase; KEGG: amt:Amet_2763 acetate kinase YP_001918458.1 TIGRFAM: cysteine synthase; cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: amt:Amet_0056 cysteine synthase A YP_001918459.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: aoe:Clos_2051 PAS modulated sigma54 specific transcriptional regulator, Fis family YP_001918461.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: dge:Dgeo_1652 purine nucleosidase YP_001918463.1 PFAM: peptidase S16 lon domain protein; KEGG: cth:Cthe_1773 peptidase S16, lon-like protein YP_001918464.1 KEGG: amt:Amet_0014 hypothetical protein YP_001918465.1 KEGG: cth:Cthe_3190 helicase, RecD/TraA family; TIGRFAM: helicase, RecD/TraA family; SMART: Helix-hairpin-helix DNA-binding class 1; AAA ATPase YP_001918466.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; KEGG: tpd:Teth39_0330 diguanylate cyclase with GAF sensor YP_001918467.1 PFAM: protein of unknown function DUF192; KEGG: pth:PTH_1454 hypothetical protein YP_001918468.1 PFAM: type II secretion system protein; KEGG: pth:PTH_1453 flp pilus assembly protein TadC YP_001918469.1 PFAM: type II secretion system protein E; KEGG: drm:Dred_2116 type II secretion system protein E YP_001918470.1 PFAM: response regulator receiver; KEGG: drm:Dred_2115 response regulator receiver protein YP_001918471.1 TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: drm:Dred_2114 SAF domain protein YP_001918472.1 KEGG: drm:Dred_2113 hypothetical protein YP_001918473.1 PFAM: TadE family protein; KEGG: pth:PTH_1447 flp pilus assembly protein TadG YP_001918474.1 PFAM: peptidase A24A prepilin type IV; KEGG: drm:Dred_2111 peptidase A24A, prepilin type IV YP_001918475.1 PFAM: Flp/Fap pilin component; KEGG: drm:Dred_2110 Flp/Fap pilin component YP_001918476.1 PFAM: Flp/Fap pilin component; KEGG: bpe:BP1991 hypothetical protein YP_001918478.1 PFAM: regulatory protein LuxR; response regulator receiver; Sigma-70 region 4 type 2; KEGG: amt:Amet_3141 two component transcriptional regulator, LuxR family YP_001918479.1 PFAM: ATP-binding region ATPase domain protein; Sensor DegS domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: pth:PTH_1443 sensor protein DegS and signal transduction histidine kinase YP_001918480.1 PFAM: cell wall hydrolase/autolysin; KEGG: pth:PTH_1971 N-acetylmuramoyl-L-alanine amidase YP_001918481.1 PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: aoe:Clos_2639 polysaccharide biosynthesis protein YP_001918482.1 KEGG: bth:BT_2691 methenyltetrahydrofolate cyclohydrolase YP_001918483.1 PFAM: S-adenosylmethionine synthetase; KEGG: chy:CHY_0138 S-adenosylmethionine synthetase YP_001918484.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: chy:CHY_1651 DNA polymerase IV - ambiguity YP_001918485.1 TIGRFAM: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: cdf:CD0128 (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase YP_001918486.1 KEGG: amt:Amet_2147 hypothetical protein YP_001918487.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: cau:Caur_2890 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_001918488.1 PFAM: sugar fermentation stimulation protein; KEGG: amt:Amet_2465 sugar fermentation stimulation protein YP_001918489.1 PFAM: transposase mutator type; KEGG: gka:GK0877 transposase of IS654-like element YP_001918490.1 PFAM: beta-lactamase domain protein; KEGG: tma:TM1162 hypothetical protein YP_001918492.1 PFAM: aldehyde ferredoxin oxidoreductase; Aldehyde ferredoxin oxidoreductase; KEGG: amt:Amet_0699 aldehyde ferredoxin oxidoreductase YP_001918493.1 PFAM: glutaredoxin; glutaredoxin 2; KEGG: fno:Fnod_0854 glutaredoxin-like protein, YruB-family YP_001918494.1 PFAM: Radical SAM domain protein; KEGG: drm:Dred_0691 spore photoproduct lyase YP_001918495.1 KEGG: chy:CHY_0280 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_001918496.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: aoe:Clos_0883 MATE efflux family protein YP_001918497.1 KEGG: gur:Gura_0006 hypothetical protein YP_001918498.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: dsy:DSY1801 hypothetical protein YP_001918499.1 KEGG: amt:Amet_3028 hypothetical protein YP_001918500.1 PFAM: phosphate acetyl/butaryl transferase; KEGG: tpd:Teth39_0460 phosphate butyryltransferase YP_001918501.1 catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate YP_001918502.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: sth:STH1830 leucine dehydrogenase YP_001918503.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: chy:CHY_0628 transcriptional regulator, LysR family YP_001918504.1 Required for the synthesis of the thiazole moiety YP_001918505.1 PFAM: aminotransferase class V; KEGG: tte:TTE1663 cysteine sulfinate desulfinase/cysteine desulfurase and related enzyme YP_001918506.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: dsy:DSY3515 hypothetical protein YP_001918507.1 KEGG: sth:STH3287 hypothetical protein YP_001918508.1 TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: amt:Amet_1317 integral membrane protein MviN YP_001918510.1 PFAM: Polynucleotide adenylyltransferase region; KEGG: drm:Dred_0158 metal dependent phosphohydrolase YP_001918511.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: amt:Amet_1718 MATE efflux family protein YP_001918512.1 PFAM: GCN5-related N-acetyltransferase; KEGG: tko:TK0232 N-acetyltransferase, GNAT family YP_001918513.1 KEGG: mfa:Mfla_1973 flagellar hook-length control protein YP_001918514.1 KEGG: bha:BH2473 flagellar biosynthesis YP_001918515.1 TIGRFAM: integral membrane protein TIGR01906; KEGG: tex:Teth514_1033 integral membrane protein TIGR01906 YP_001918516.1 KEGG: dsy:DSY3458 hypothetical protein YP_001918517.1 PFAM: GCN5-related N-acetyltransferase; KEGG: uma:UM01623.1 hypothetical protein YP_001918518.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: amt:Amet_3617 ABC transporter related YP_001918519.1 PFAM: transport system permease protein; KEGG: aoe:Clos_0916 transport system permease protein YP_001918520.1 PFAM: periplasmic binding protein; KEGG: bha:BH1585 ferric ion ABC transpoter (ferric ion-binding protein) YP_001918521.1 PFAM: protein of unknown function DUF95 transmembrane; KEGG: mma:MM_0592 integral membrane protein YP_001918522.1 PFAM: Rubrerythrin; Rubredoxin-type Fe(Cys)4 protein; KEGG: csc:Csac_0445 rubrerythrin YP_001918523.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; protease-associated PA domain protein; copper amine oxidase domain protein; KEGG: btk:BT9727_4090 minor extracellular protease YP_001918524.1 PFAM: glycosyl hydrolase BNR repeat-containing protein; transglutaminase domain protein; copper amine oxidase domain protein; KEGG: sfu:Sfum_3494 hypothetical protein YP_001918525.1 KEGG: aoe:Clos_2269 glycosyl transferase, WecB/TagA/CpsF family; TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF YP_001918526.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: aoe:Clos_1197 transcriptional regulator, LysR family YP_001918527.1 KEGG: aoe:Clos_1961 hypothetical protein YP_001918528.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pth:PTH_2468 retron-type reverse transcriptase YP_001918529.1 PFAM: glycosyl transferase family 4; KEGG: mta:Moth_0218 glycosyl transferase, family 4 YP_001918530.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: mta:Moth_2366 cell envelope-related transcriptional attenuator YP_001918531.1 KEGG: cno:NT01CX_1527 capsular polysaccharide biosynthesis protein Cap5O, putative; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; 6-phosphogluconate dehydrogenase NAD-binding; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_001918532.1 PFAM: polysaccharide pyruvyl transferase; KEGG: swo:Swol_0123 polysaccharide pyruvyl transferase YP_001918533.1 KEGG: csc:Csac_2361 hypothetical protein YP_001918534.1 PFAM: polysaccharide deacetylase; KEGG: ckl:CKL_3772 predicted deacetylase YP_001918535.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: pth:PTH_2767 nucleoside-diphosphate-sugar epimerases YP_001918536.1 PFAM: glycosyl transferase group 1; KEGG: drm:Dred_2202 glycosyl transferase, group 1 YP_001918537.1 PFAM: O-antigen polymerase; KEGG: pth:PTH_2774 hypothetical protein YP_001918538.1 PFAM: protein of unknown function DUF214; KEGG: bpu:BPUM_2673 ABC superfamily ATP binding cassette transporter, membrane protein YP_001918539.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bay:RBAM_027350 YtrE YP_001918540.1 KEGG: aoe:Clos_2272 conserved hypothetical protein YP_001918541.1 PFAM: extracellular solute-binding protein family 5; KEGG: amt:Amet_3331 extracellular solute-binding protein, family 5 YP_001918542.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amt:Amet_3330 binding-protein-dependent transport systems inner membrane component YP_001918543.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amt:Amet_3329 binding-protein-dependent transport systems inner membrane component YP_001918544.1 KEGG: amt:Amet_3328 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001918545.1 KEGG: amt:Amet_3327 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001918546.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bcl:ABC2440 peptidase YP_001918547.1 PFAM: GCN5-related N-acetyltransferase; KEGG: dsy:DSY1415 hypothetical protein YP_001918548.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: oxidoreductase domain protein; CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: sth:STH2532 succinyl-CoA synthetase alpha subunit YP_001918549.1 KEGG: sth:STH2533 succinyl-CoA synthetase beta subunit; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-citrate lyase/succinyl-CoA ligase; ATP-grasp domain protein YP_001918550.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: nis:NIS_0837 fumarate/tartrate hydratase, beta subunit YP_001918551.1 KEGG: chy:CHY_1375 fumarate hydratase; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region YP_001918552.1 PFAM: malic protein domain protein; malic protein NAD-binding; KEGG: chy:CHY_1369 NAD-dependent malic enzyme YP_001918553.1 PFAM: sodium:dicarboxylate symporter; KEGG: hal:VNG6308G GltP YP_001918554.1 KEGG: aoe:Clos_1351 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001918555.1 KEGG: aoe:Clos_1350 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001918556.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amt:Amet_2907 binding-protein-dependent transport systems inner membrane component YP_001918557.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amt:Amet_2908 nickel-transporting ATPase YP_001918558.1 PFAM: extracellular solute-binding protein family 5; KEGG: amt:Amet_2909 extracellular solute-binding protein, family 5 YP_001918559.1 PFAM: peptidase M20; protease-associated PA domain protein; peptidase M28; KEGG: btl:BALH_4856 aminopeptidase YP_001918560.1 KEGG: pth:PTH_0546 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_001918561.1 KEGG: swo:Swol_2483 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; metal-dependent phosphohydrolase HD region YP_001918562.1 PFAM: Integrase catalytic region; KEGG: tex:Teth514_0755 integrase, catalytic region YP_001918563.1 PFAM: copper amine oxidase domain protein; KEGG: cth:Cthe_3188 copper amine oxidase-like protein YP_001918564.1 PFAM: copper amine oxidase domain protein; KEGG: tva:TVAG_025170 fimbriae-associated protein, putative Pfam: MpPF2 PROSITE: ASP_RICH GLU_RICH VAL_RICH YP_001918565.1 PFAM: 3H domain protein; Helix-turn-helix type 11 domain protein; KEGG: tte:TTE0520 hypothetical protein YP_001918566.1 KEGG: amt:Amet_0017 quinolinate synthetase complex, A subunit; TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A YP_001918567.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: bcy:Bcer98_3145 L-aspartate oxidase YP_001918568.1 KEGG: pth:PTH_0226 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_001918569.1 PFAM: Radical SAM domain protein; KEGG: sat:SYN_01173 radical SAM superfamily protein YP_001918570.1 PFAM: protein of unknown function DUF134; Sigma-70 region 4 type 2; KEGG: mta:Moth_1655 protein of unknown function DUF134 YP_001918571.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Cobyrinic acid ac-diamide synthase; KEGG: pth:PTH_0585 MinD superfamily P-loop ATPase YP_001918572.1 KEGG: tpd:Teth39_0638 hypothetical protein YP_001918573.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: mta:Moth_1411 dinitrogenase iron-molybdenum cofactor biosynthesis YP_001918574.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: mta:Moth_1412 dinitrogenase iron-molybdenum cofactor biosynthesis YP_001918575.1 PFAM: Integrase catalytic region; KEGG: tpd:Teth39_0240 integrase, catalytic region YP_001918578.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: pth:PTH_2396 transposase and inactivated derivatives YP_001918579.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: swo:Swol_1977 hypothetical protein YP_001918580.1 KEGG: chy:CHY_0280 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_001918581.1 KEGG: cac:CA_P0121 Leu-rich protein family protein, YaeG (E.coli) homolog YP_001918582.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ckl:CKL_3437 predicted enoate reductase YP_001918583.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: lpl:lp_0060 short-chain dehydrogenase/oxidoreductase YP_001918584.1 KEGG: ehi:3.t00034 Viral A-type inclusion protein repeat Pfam: CH GBP_C Myosin_tail_1 Halo_GVPC DUF593 Filament MAP7 DUF827 CHASE3 Prefoldin_2 PROSITE: GLU_RICH LYS_RICH CH YP_001918585.1 PFAM: beta-lactamase domain protein; copper amine oxidase domain protein; KEGG: pmo:Pmob_1903 beta-lactamase domain protein YP_001918586.1 PFAM: SirA family protein; KEGG: drm:Dred_1242 SirA family protein YP_001918587.1 KEGG: amt:Amet_3546 hypothetical protein YP_001918589.1 KEGG: bha:BH1197 hypothetical protein YP_001918590.1 PFAM: ABC transporter transmembrane region; SMC domain protein; ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE2354 ABC-type multidrug/protein/lipid transport system, ATPase component YP_001918591.1 PFAM: Radical SAM domain protein; KEGG: tte:TTE2746 arylsulfatase regulator (Fe-S oxidoreductase) YP_001918594.1 KEGG: mdo:100014006 similar to ortholog of keratin associated protein 16-1 KRTAP16-1 (Homo sapiens) YP_001918596.1 KEGG: amt:Amet_0938 diguanylate cyclase and metal dependent phosphohydrolase; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region YP_001918597.1 PFAM: protein of unknown function UPF0236; KEGG: pth:PTH_2245 hypothetical protein YP_001918598.1 TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: glutamine amidotransferase class-I; Carbamoyl-phosphate synthase small chain; KEGG: bcz:BCZK3646 carbamoyl phosphate synthase small subunit YP_001918599.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: phosphoribosylglycinamide synthetase; protein of unknown function DUF201; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl-phosphate synthetase large chain domain protein; MGS domain protein; KEGG: chy:CHY_1499 carbamoyl-phosphate synthase, large subunit YP_001918600.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: amt:Amet_2943 methyl-accepting chemotaxis sensory transducer YP_001918601.1 KEGG: bpu:BPUM_2789 sensor histidine kinase YP_001918602.1 PFAM: chemotaxis sensory transducer; KEGG: bha:BH3915 methyl-accepting chemotaxis protein YP_001918603.1 KEGG: swo:Swol_2483 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; diguanylate cyclase; PFAM: GGDEF domain containing protein; metal-dependent phosphohydrolase HD sub domain; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; PAC repeat-containing protein; metal-dependent phosphohydrolase HD region YP_001918604.1 KEGG: ctc:CTC01497 hypothetical protein YP_001918605.1 KEGG: ctc:CTC01498 hypothetical protein YP_001918606.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: amt:Amet_0582 methyl-accepting chemotaxis sensory transducer YP_001918607.1 PFAM: Na+/H+ antiporter NhaC; KEGG: ctc:CTC02529 Na+/H+ antiporter YP_001918608.1 KEGG: sth:STH832 cystathionine gamma-lyase; TIGRFAM: methionine gamma-lyase; PFAM: aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_001918609.1 PFAM: GerA spore germination protein; KEGG: bcz:pE33L466_0139 spore germination protein KA YP_001918610.1 TIGRFAM: spore germination protein; PFAM: Spore germination protein; KEGG: aoe:Clos_0316 spore germination protein YP_001918611.1 TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: bha:BH2186 hypothetical protein YP_001918612.1 PFAM: Integrase catalytic region; KEGG: pth:PTH_2713 hypothetical protein YP_001918613.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: amt:Amet_3272 heavy metal translocating P-type ATPase YP_001918614.1 PFAM: regulatory protein ArsR; KEGG: ckl:CKL_3755 predicted transcriptional regulator YP_001918615.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; cadmium-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: tex:Teth514_1276 heavy metal translocating P-type ATPase YP_001918616.1 KEGG: deb:DehaBAV1_1172 hypothetical protein YP_001918617.1 KEGG: hau:Haur_3885 trigger factor domain YP_001918618.1 KEGG: tte:TTE2425 hypothetical protein YP_001918619.1 TIGRFAM: flavocytochrome c; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; FMN-binding domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aoe:Clos_0178 flavocytochrome c YP_001918620.1 PFAM: helix-turn-helix- domain containing protein AraC type; response regulator receiver; KEGG: amt:Amet_1138 response regulator receiver protein YP_001918621.1 PFAM: transcriptional activator domain; KEGG: tle:Tlet_1270 transcriptional regulator, SARP family YP_001918622.1 TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: amt:Amet_0524 cobalt transport protein YP_001918623.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: amt:Amet_0525 cobalt ABC transporter, ATPase subunit YP_001918624.1 KEGG: nph:NP2862A ABC-type transport system periplasmic substrate-binding protein (probable substrates zinc/manganese/metal ions) 1 (probable adhesion lipoprotein) YP_001918625.1 catalyzes the ATP-dependent transport of cobalt YP_001918626.1 KEGG: amt:Amet_0526 hypothetical protein YP_001918627.1 PFAM: formate C-acetyltransferase glycine radical; pyruvate formate-lyase PFL; KEGG: amt:Amet_0584 formate C-acetyltransferase YP_001918628.1 KEGG: amt:Amet_0583 glycyl-radical enzyme activating protein family; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; Radical SAM domain protein YP_001918629.1 PFAM: protein of unknown function DUF340 membrane; KEGG: dsy:DSY3973 hypothetical protein YP_001918630.1 KEGG: mta:Moth_0516 spore germination protein-like YP_001918631.1 PFAM: peptidase S41; KEGG: tte:TTE2350 hypothetical protein YP_001918632.1 PFAM: peptidase S41; KEGG: tte:TTE1173 hypothetical protein YP_001918633.1 PFAM: TENA/THI-4 domain protein; KEGG: bcy:Bcer98_0612 transcriptional activator, TenA family YP_001918634.1 PFAM: hydroxyethylthiazole kinase; KEGG: ckl:CKL_2918 ThiM YP_001918635.1 TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: ckl:CKL_2919 ThiD YP_001918636.1 TIGRFAM: thiW protein; PFAM: ThiW family protein; KEGG: oih:OB0476 hypothetical protein YP_001918637.1 PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB; KEGG: ana:alr3372 transposase YP_001918638.1 PFAM: transposase IS200-family protein; KEGG: tac:Ta0474 transposase related protein YP_001918639.1 KEGG: pth:PTH_0170 hypothetical membrane protein YP_001918640.1 PFAM: copper amine oxidase domain protein; KEGG: cth:Cthe_1827 copper amine oxidase-like protein YP_001918641.1 PFAM: DNA polymerase beta domain protein region; KEGG: csc:Csac_0218 DNA polymerase, beta domain protein region YP_001918643.1 KEGG: pfa:PFE0440w hypothetical protein YP_001918644.1 KEGG: msi:Msm_1725 hypothetical protein YP_001918645.1 PFAM: copper amine oxidase domain protein; KEGG: tva:TVAG_025170 fimbriae-associated protein, putative Pfam: MpPF2 PROSITE: ASP_RICH GLU_RICH VAL_RICH YP_001918646.1 KEGG: tva:TVAG_355490 viral A-type inclusion protein, putative Pfam: ASD2 Myosin_tail_1 TBPIP BRE1 OmpH DMPK_coil HR1 DUF904 Rad50_zn_hook Exonuc_VII_S Prefoldin_2 Snf7 CDC37_N ATG16 BAR Rab5-bind bZIP_1 EzrA DUF593 TPR_MLP1_2 FlaC_arch Laminin_I Prefoldin GBP_C PspA_IM30 KNOX2 Tropomyosin Macscav_rec DUF1978 Spectrin Cob_adeno_trans Prp19 SMC_Nse1 Apolipoprotein Filament CHASE3 Baculo_PEP_C DREPP HALZ Vicilin_N GRIP PROSITE: ASN_RICH GLU_RICH YP_001918647.1 PFAM: copper amine oxidase domain protein; KEGG: tva:TVAG_025170 fimbriae-associated protein, putative Pfam: MpPF2 PROSITE: ASP_RICH GLU_RICH VAL_RICH YP_001918648.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: dsy:DSY3347 hypothetical protein YP_001918649.1 PFAM: Radical SAM domain protein; KEGG: cbe:Cbei_2007 radical SAM domain protein YP_001918650.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: mpe:MYPE6470 DNA topoisomerase IV subunit A YP_001918651.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: cne:CND01810 Dynactin YP_001918652.1 PFAM: O-antigen polymerase; KEGG: swo:Swol_0127 hypothetical protein YP_001918654.1 KEGG: swo:Swol_2002 hypothetical protein YP_001918655.1 PFAM: protein of unknown function DUF955; KEGG: swo:Swol_2003 Zn peptidase-like protein YP_001918656.1 PFAM: helix-turn-helix domain protein; KEGG: bcy:Bcer98_3995 putative transcriptional regulator, XRE family YP_001918657.1 KEGG: bur:Bcep18194_B2752 hypothetical protein YP_001918658.1 KEGG: pyo:PY02104 rhoptry protein Pfam: ATP-synt_E_2 Myosin_tail_1 DUF1374 MttA_Hcf106 AIP3 FCH DUF148 RasGAP Phg_2220_C MACPF VAR1 EAP30 Syntaxin-6_N PROSITE: ASN_RICH LYS_RICH PHE_RICH YP_001918659.1 KEGG: pfa:PF10_0195 hypothetical protein YP_001918664.1 KEGG: cdf:CD1661 transposase-like protein B; TIGRFAM: transposase, IS605 OrfB family; PFAM: putative transposase IS891/IS1136/IS1341 family; transposase IS605 OrfB YP_001918666.1 KEGG: bra:BRADO6391 hypothetical protein YP_001918667.1 PFAM: helix-turn-helix domain protein; protein of unknown function DUF955; KEGG: bra:BRADO6390 conserved hypothetical protein; putative lambda repressor-like DNA-binding domains YP_001918668.1 KEGG: pfa:PF14_0588 hypothetical protein YP_001918669.1 KEGG: sth:STH282 hypothetical protein YP_001918670.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: bca:BCE_5394 aminotransferase family protein YP_001918671.1 undetermined role; similar to CarB protein but much smaller YP_001918672.1 PFAM: sugar transferase; KEGG: cth:Cthe_2344 undecaprenyl-phosphate galactose phosphotransferase YP_001918673.1 PFAM: transposase IS3/IS911 family protein; KEGG: bcy:Bcer98_2284 transposase IS3/IS911 family protein YP_001918674.1 KEGG: csc:Csac_1376 coenzyme F390 synthetase-like protein YP_001918675.1 PFAM: Heparinase II/III family protein; KEGG: sat:SYN_02684 hypothetical cytosolic protein YP_001918676.1 PFAM: glycosyl transferase group 1; KEGG: csc:Csac_1092 glycosyl transferase, group 1 YP_001918677.1 KEGG: mvn:Mevan_1584 UDP-glucose/GDP-mannose dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_001918678.1 PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: vha:VIBHAR_00697 hypothetical protein YP_001918679.1 PFAM: glycosyl transferase group 1; KEGG: asu:Asuc_0058 glycosyl transferase group 1 YP_001918680.1 KEGG: amt:Amet_0210 O-antigen polymerase YP_001918681.1 PFAM: asparagine synthase; KEGG: cco:CCC13826_0536 asparagine synthase (glutamine-hydrolyzing) YP_001918682.1 TIGRFAM: integral membrane protein MviN; PFAM: multi antimicrobial extrusion protein MatE; virulence factor MVIN family protein; KEGG: amt:Amet_0214 integral membrane protein MviN YP_001918683.1 KEGG: pdi:BDI_0434 putative hexapeptide transferase family protein YP_001918684.1 KEGG: bcl:ABC3686 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_001918685.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: chy:CHY_2582 UTP-glucose-1-phosphate uridylyltransferase YP_001918688.1 PFAM: protein of unknown function DUF955; KEGG: ckl:CKL_1751 hypothetical protein YP_001918689.1 PFAM: helix-turn-helix domain protein; KEGG: ssp:SSP1327 predicted transcriptional regulator YP_001918691.1 PFAM: N-acetylmuramoyl-L-alanine amidase family 2; KEGG: cno:NT01CX_2157 N-acetylmuramoyl-L-alanine amidase CwlL precursor (cellwall hydrolase) (autolysin) YP_001918692.1 KEGG: cno:NT01CX_0746 hypothetical protein YP_001918693.1 KEGG: aoe:Clos_2608 hypothetical protein YP_001918694.1 KEGG: mta:Moth_1792 hypothetical protein YP_001918695.1 PFAM: protein of unknown function DUF1659; KEGG: mta:Moth_1793 hypothetical protein YP_001918697.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pth:PTH_2468 retron-type reverse transcriptase YP_001918698.1 KEGG: fno:Fnod_0715 S-layer domain protein YP_001918699.1 KEGG: pyo:PY01254 hypothetical protein Pfam: Abhydrolase_1 PROSITE: ASN_RICH YP_001918700.1 KEGG: tva:TVAG_165100 hypothetical protein Pfam: Filament YP_001918701.1 PFAM: transposase IS3/IS911 family protein; KEGG: bcy:Bcer98_2284 transposase IS3/IS911 family protein YP_001918702.1 PFAM: SEC-C motif domain protein; KEGG: drm:Dred_3024 hypothetical protein YP_001918703.1 KEGG: rca:Rcas_0762 protein of unknown function DUF86 YP_001918704.1 PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_4418 DNA polymerase, beta domain protein region YP_001918706.1 PFAM: S-layer domain protein; KEGG: cth:Cthe_2168 propeptide, PepSY amd peptidase M4 YP_001918707.1 KEGG: amt:Amet_1492 hypothetical protein YP_001918708.1 PFAM: protein of unknown function DUF86; KEGG: rca:Rcas_0762 protein of unknown function DUF86 YP_001918709.1 PFAM: DNA polymerase beta domain protein region; KEGG: rrs:RoseRS_4418 DNA polymerase, beta domain protein region YP_001918710.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: gka:GK0752 huntingtin interacting protein E-like protein YP_001918711.1 PFAM: SEC-C motif domain protein; KEGG: drm:Dred_3024 hypothetical protein YP_001918712.1 KEGG: drm:Dred_3024 hypothetical protein YP_001918713.1 PFAM: DNA polymerase beta domain protein region; KEGG: gur:Gura_0658 DNA polymerase, beta domain protein region YP_001918714.1 PFAM: protein of unknown function DUF86; KEGG: gme:Gmet_3258 protein of unknown function DUF86 YP_001918715.1 PFAM: Creatininase; KEGG: syf:Synpcc7942_1592 creatinine amidohydrolase YP_001918716.1 PFAM: Na+/solute symporter; KEGG: oih:OB2828 sodium:proline symporter YP_001918717.1 PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; KEGG: ckl:CKL_1310 transcriptional regulator YP_001918718.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: tte:TTE2131 NADH:flavin oxidoreductase, Old Yellow enzyme family YP_001918719.1 PFAM: DNA polymerase beta domain protein region; KEGG: chy:CHY_1111 nucleotidyltransferase domain protein YP_001918720.1 TIGRFAM: nucleotidyltransferase substrate binding protein, HI0074 family; PFAM: Nucleotidyltransferase substrate binding protein HI0074; KEGG: chy:CHY_1110 nucleotidyltransferase substrate-binding protein YP_001918721.1 PFAM: regulatory protein TetR; KEGG: cno:NT01CX_0025 transcription regulator (TetR/AcrR family) YP_001918723.1 KEGG: cbe:Cbei_2007 radical SAM domain protein YP_001918724.1 PFAM: conserved hypothetical protein; KEGG: ctc:CTC01844 membrane spanning protein, similar to vegetatible incompatibility protein HET-E-1 YP_001918725.1 PFAM: histidine kinase HAMP region domain protein; Cache domain protein; chemotaxis sensory transducer; KEGG: cbh:CLC_0436 methyl-accepting chemotaxis protein YP_001918728.1 KEGG: csc:Csac_0764 signal transduction histidine kinase regulating citrate/malate metabolism YP_001918730.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: drm:Dred_2829 transposase IS116/IS110/IS902 family protein YP_001918731.1 PFAM: leucine-rich repeat protein; peptidase M56 BlaR1; KEGG: ckl:CKL_2235 predicted regulatory protein YP_001918732.1 PFAM: Penicillinase repressor; KEGG: ckl:CKL_2236 transcriptional regulator YP_001918733.1 KEGG: sat:SYN_00734 uncharacterized protein involved in formate dehydrogenase formation YP_001918734.1 PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: sth:STH2602 putative formate dehydrogenase subunit YP_001918735.1 PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; KEGG: sth:STH2601 formate dehydrogenase alpha subunit YP_001918736.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sth:STH3100 formate dehydrogenase beta subunit YP_001918737.1 TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: amt:Amet_2280 electron transport complex, RnfABCDGE type, C subunit YP_001918738.1 TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; PFAM: NQR2 and RnfD family protein; KEGG: ctc:CTC01020 RnfD/NqrB YP_001918739.1 PFAM: KWG Leptospira repeat protein; KEGG: amt:Amet_1855 KWG Leptospira repeat protein YP_001918740.1 KEGG: mma:MM_0933 glutathione-regulated potassium-efflux system protein YP_001918741.1 PFAM: Amidohydrolase 3; KEGG: rha:RHA1_ro02836 possible metal-dependent amidohydrolase YP_001918742.1 PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: fno:Fnod_0313 3-oxoacyl-(acyl-carrier-protein) reductase YP_001918743.1 PFAM: coenzyme A transferase; KEGG: amt:Amet_4532 coenzyme A transferase YP_001918744.1 KEGG: cbe:Cbei_3352 sigma54 specific transcriptional regulator, fis family; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein; AAA ATPase YP_001918745.1 KEGG: bha:BH1632 hypothetical protein YP_001918747.1 KEGG: ckl:CKL_1680 hypothetical protein YP_001918748.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: ckl:CKL_1679 predicted RNA polymerase sigma factor YP_001918749.1 KEGG: apj:APJL_2004 hypothetical protein YP_001918750.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: pth:PTH_2396 transposase and inactivated derivatives YP_001918752.1 KEGG: bce:BC0552 internalin protein YP_001918753.1 KEGG: pfa:PF14_0551 hypothetical protein YP_001918754.1 KEGG: pho:PH1870 hypothetical protein YP_001918755.1 KEGG: amt:Amet_1809 hypothetical protein YP_001918756.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: cpy:Cphy_2060 MATE efflux family protein YP_001918757.1 KEGG: chy:CHY_1700 putative prophage LambdaCh01, restriction endonuclease YP_001918758.1 PFAM: heat shock protein DnaJ domain protein; KEGG: plt:Plut_1487 heat shock protein DnaJ YP_001918759.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mtp:Mthe_0432 ABC transporter related YP_001918760.1 PFAM: transport system permease protein; inner-membrane translocator; KEGG: mtp:Mthe_0443 transport system permease protein YP_001918761.1 PFAM: periplasmic binding protein; KEGG: mtp:Mthe_1597 periplasmic binding protein YP_001918762.1 TIGRFAM: polymorphic outer membrane protein; SMART: Parallel beta-helix repeat; Carbohydrate-binding and sugar hydrolysis; KEGG: stp:Strop_3399 polymorphic outer membrane protein YP_001918763.1 KEGG: amt:Amet_1820 hypothetical protein YP_001918764.1 KEGG: mdo:100013535 similar to tRNA-Guanine Transglycosylase YP_001918765.1 PFAM: response regulator receiver; KEGG: swo:Swol_2400 response regulator receiver protein YP_001918767.1 PFAM: Accessory gene regulator B; KEGG: cth:Cthe_2358 accessory gene regulator B YP_001918768.1 KEGG: amt:Amet_1817 hypothetical protein YP_001918769.1 PFAM: protein of unknown function DUF214; KEGG: cth:Cthe_3172 protein of unknown function DUF214 YP_001918770.1 KEGG: amt:Amet_0367 S-layer domain-like protein YP_001918771.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hau:Haur_2605 ABC transporter related YP_001918772.1 PFAM: response regulator receiver; KEGG: swo:Swol_2400 response regulator receiver protein YP_001918774.1 KEGG: cpr:CPR_1532 accessory gene regulator protein B, putative YP_001918775.1 PFAM: ATP-binding region ATPase domain protein; KEGG: swo:Swol_2401 signal transduction histidine kinase regulating citrate/malate metabolism YP_001918776.1 PFAM: protein of unknown function UPF0236; KEGG: pth:PTH_2245 hypothetical protein YP_001918778.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: ckl:CKL_0779 ProX YP_001918779.1 PFAM: Na+/H+ antiporter NhaC; KEGG: amt:Amet_4617 Na+/H+ antiporter NhaC YP_001918780.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: fnu:FN0649 Exoenzyme regulatory protein AepA precursor YP_001918781.1 PFAM: beta-lactamase; KEGG: mma:MM_3157 putative 6-aminohexanoate-dimer hydrolase YP_001918783.1 PFAM: Integrase catalytic region; KEGG: tpd:Teth39_0240 integrase, catalytic region YP_001918784.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: drm:Dred_2453 binding-protein-dependent transport systems inner membrane component YP_001918785.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: oan:Oant_1584 binding-protein-dependent transport systems inner membrane component YP_001918786.1 KEGG: sth:STH2824 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001918787.1 KEGG: chy:CHY_1127 oligopeptide/dipeptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001918788.1 PFAM: extracellular solute-binding protein family 5; KEGG: chy:CHY_1128 oligopeptide/dipeptide ABC transporter, peptide-binding protein YP_001918789.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: cdf:CD1612 putative amidohydrolase YP_001918790.1 PFAM: peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase; KEGG: bra:BRADO2616 hypothetical protein YP_001918791.1 PFAM: copper amine oxidase domain protein; KEGG: pfa:PF11_0507 antigen 332 YP_001918792.1 PFAM: Na+/H+ antiporter NhaC; KEGG: csa:Csal_3210 Na+/H+ antiporter NhaC YP_001918793.1 TIGRFAM: L-asparaginase, type I; PFAM: Asparaginase/glutaminase; KEGG: bat:BAS2916 L-asparaginase YP_001918794.1 PFAM: Na+/H+ antiporter NhaC; KEGG: bwe:BcerKBAB4_1635 Na+/H+ antiporter NhaC YP_001918795.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: swo:Swol_1977 hypothetical protein YP_001918796.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: cbf:CLI_0762 methyl-accepting chemotaxis protein YP_001918797.1 KEGG: amt:Amet_3565 hypothetical protein YP_001918798.1 PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: mxa:MXAN_2203 hypothetical protein YP_001918799.1 TIGRFAM: anion transporter; PFAM: Arsenical pump membrane protein; sodium/sulphate symporter; C4-dicarboxylate anaerobic carrier; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: mmp:MMP0152 cation transporter YP_001918800.1 TIGRFAM: anaerobic c4-dicarboxylate antiporter, Dcu family; PFAM: anaerobic c4-dicarboxylate membrane transporter; C4-dicarboxylate anaerobic carrier; KEGG: bcy:Bcer98_0366 anaerobic C4-dicarboxylate antiporter, Dcu family YP_001918801.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: mta:Moth_0816 oxidoreductase FAD/NAD(P)-binding YP_001918802.1 KEGG: chy:CHY_0933 putative anaerobic sulfite reductase, A subunit YP_001918803.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: swo:Swol_0400 4Fe-4S ferredoxin, iron-sulfur binding YP_001918804.1 PFAM: methyl-viologen-reducing hydrogenase delta subunit; KEGG: hmo:HM1_2009 methyl-viologen-reducing hydrogenase domain protein, subunit d, putative YP_001918805.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: chy:CHY_0930 heterodisulfide reductase, subunit A, selenocysteine-containing YP_001918806.1 KEGG: chy:CHY_0927 putative heterodisulfide reductase, C subunit YP_001918807.1 PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: sfu:Sfum_4093 protein of unknown function DUF224, cysteine-rich region domain protein YP_001918808.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sfu:Sfum_4095 fumarate reductase/succinate dehydrogenase flavoprotein domain protein YP_001918809.1 PFAM: ferredoxin; KEGG: sfu:Sfum_4094 4Fe-4S ferredoxin, iron-sulfur binding domain protein YP_001918810.1 PFAM: fumarate lyase; KEGG: bha:BH1426 aspartate ammonia-lyase YP_001918811.1 PFAM: C4-dicarboxylate anaerobic carrier; AbgT putative transporter; short chain fatty acid transporter; KEGG: amt:Amet_0661 C4-dicarboxylate anaerobic carrier YP_001918812.1 TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: bld:BLi00323 hypothetical protein YP_001918813.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: drm:Dred_0416 regulatory proteins, IclR YP_001918814.1 PFAM: Na+/H+ antiporter NhaC; KEGG: amt:Amet_4617 Na+/H+ antiporter NhaC YP_001918816.1 KEGG: ckl:CKL_4044 hypothetical protein YP_001918818.1 TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase FGGY; KEGG: amt:Amet_0557 glycerol kinase YP_001918819.1 PFAM: major facilitator superfamily MFS_1; KEGG: gur:Gura_2536 major facilitator superfamily MFS_1 YP_001918820.1 KEGG: cko:CKO_04984 hypothetical protein; TIGRFAM: methionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase YP_001918822.1 PFAM: Na+/H+ antiporter NhaC; KEGG: ctc:CTC02529 Na+/H+ antiporter YP_001918823.1 PFAM: sodium:dicarboxylate symporter; KEGG: amt:Amet_3182 sodium:dicarboxylate symporter YP_001918824.1 KEGG: swo:Swol_1503 YvyF YP_001918825.1 PFAM: FMN-binding domain protein; copper amine oxidase domain protein; KEGG: aoe:Clos_0273 FMN-binding domain protein YP_001918826.1 PFAM: Ferritin Dps family protein; KEGG: amt:Amet_1346 ferritin, Dps family protein YP_001918827.1 PFAM: chemotaxis sensory transducer; KEGG: amt:Amet_4530 methyl-accepting chemotaxis sensory transducer YP_001918828.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: tpd:Teth39_2038 monosaccharide-transporting ATPase YP_001918829.1 PFAM: inner-membrane translocator; KEGG: tpd:Teth39_2039 monosaccharide-transporting ATPase YP_001918830.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tte:TTE0204 ABC-type sugar (aldose) transport system, ATPase component YP_001918831.1 PFAM: RbsD or FucU transport; KEGG: cpr:CPR_1602 ribose ABC transporter protein YP_001918832.1 TIGRFAM: ribokinase; PFAM: PfkB domain protein; KEGG: tte:TTE0202 sugar kinase, ribokinase family YP_001918833.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: tex:Teth514_0161 periplasmic binding protein/LacI transcriptional regulator YP_001918834.1 PFAM: copper amine oxidase domain protein; KEGG: amt:Amet_3714 copper amine oxidase domain protein YP_001918835.1 PFAM: S-layer domain protein; KEGG: mta:Moth_1459 Ig-like, group 2 YP_001918836.1 KEGG: pmo:Pmob_0404 TPR repeat-containing protein YP_001918837.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: oih:OB2598 thermophilic serine proteinase YP_001918838.1 TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; KEGG: tpd:Teth39_2283 cysteine desulfurase family protein YP_001918839.1 KEGG: cth:Cthe_0614 indolepyruvate oxidoreductase subunit B; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase YP_001918840.1 TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: cth:Cthe_0613 thiamine pyrophosphate enzyme-like TPP-binding YP_001918841.1 PFAM: phosphate acetyl/butaryl transferase; KEGG: cbf:CLI_3609 phosphate butyryltransferase YP_001918842.1 catalyzes the phosphorylation of 2-butanoate to butanoyl phosphate YP_001918843.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: sth:STH1830 leucine dehydrogenase YP_001918844.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; KEGG: cdf:CD2430 IclR-family transcriptional regulator YP_001918845.1 PFAM: branched-chain amino acid transport system II carrier protein; KEGG: cno:NT01CX_2428 branched-chain amino acid transport system II carrier protein YP_001918846.1 PFAM: Integrase catalytic region; KEGG: pth:PTH_2713 hypothetical protein YP_001918847.1 KEGG: cpv:cgd5_2250 hypothetical protein YP_001918848.1 PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: cno:NT01CX_0287 glycerol dehydrogenase YP_001918849.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: cbe:Cbei_3246 methyltransferase type 11 YP_001918850.1 KEGG: amt:Amet_4336 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001918851.1 KEGG: tpd:Teth39_1959 hypothetical protein YP_001918852.1 PFAM: Na+/solute symporter; KEGG: oih:OB2828 sodium:proline symporter YP_001918853.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: cdf:CD1612 putative amidohydrolase YP_001918854.1 PFAM: Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits; KEGG: cbf:CLI_3802 glycine/sarcosine/betaine reductase, component B, subunits alpha and beta YP_001918855.1 KEGG: aoe:Clos_0030 D-proline reductase (dithiol) YP_001918856.1 KEGG: amt:Amet_1685 hypothetical protein YP_001918857.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: cdf:CD1612 putative amidohydrolase YP_001918858.1 KEGG: bay:RBAM_018520 site-specific recombinase (phage integrase family) YP_001918859.1 TIGRFAM: signal peptide peptidase SppA, 36K type; PFAM: peptidase S49; KEGG: sth:STH2792 putative proteinase IV YP_001918860.1 KEGG: oih:OB0592 hypothetical protein YP_001918862.1 PFAM: protein of unknown function DUF100; KEGG: sat:SYN_02232 fructose-1,6-bisphosphatase YP_001918863.1 PFAM: Na+/H+ antiporter NhaC; KEGG: amt:Amet_4617 Na+/H+ antiporter NhaC YP_001918865.1 PFAM: thioesterase superfamily protein; KEGG: tte:TTE1843 uncharacterized protein, possibly involved in aromatic compounds catabolism YP_001918866.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sat:SYN_00998 coproporphyrinogen oxidase (NAD) YP_001918867.1 PFAM: beta-lactamase; KEGG: oih:OB3360 hypothetical protein YP_001918868.1 PFAM: protein of unknown function UPF0047; KEGG: rpb:RPB_2329 protein of unknown function UPF0047 YP_001918869.1 PFAM: major facilitator superfamily MFS_1; KEGG: amt:Amet_1009 major facilitator superfamily MFS_1 YP_001918870.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: chy:CHY_0101 hypothetical protein YP_001918871.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: tte:TTE0557 3-oxoacyl-(acyl-carrier-protein) synthase III YP_001918872.1 PFAM: alpha/beta hydrolase fold; KEGG: tte:TTE0552 predicted hydrolase or acyltransferase (alpha/beta hydrolase superfamily) YP_001918873.1 PFAM: Extracellular ligand-binding receptor; KEGG: fno:Fnod_0531 extracellular ligand-binding receptor YP_001918874.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: drm:Dred_2829 transposase IS116/IS110/IS902 family protein YP_001918875.1 PFAM: transposase IS111A/IS1328/IS1533; transposase IS116/IS110/IS902 family protein; KEGG: pth:PTH_2396 transposase and inactivated derivatives YP_001918876.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sth:STH800 branched-chain amino acid ABC transporter ATP-binding protein YP_001918877.1 PFAM: inner-membrane translocator; KEGG: sth:STH801 branched-chain amino acid ABC transporter permease protein YP_001918878.1 PFAM: inner-membrane translocator; KEGG: sth:STH802 branched-chain amino acid ABC transporter permease protein YP_001918879.1 PFAM: alpha/beta hydrolase fold; KEGG: pmo:Pmob_0519 alpha/beta hydrolase fold YP_001918880.1 PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; SMART: AAA ATPase; KEGG: tte:TTE0550 NtrC family transcriptional regulator, ATPase domain YP_001918881.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bha:BH3896 3-oxoacyl-(acyl-carrier protein) reductase YP_001918882.1 PFAM: acetyl-CoA hydrolase/transferase; KEGG: tte:TTE0554 acetyl-CoA hydrolase YP_001918883.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; KEGG: tte:TTE0553 hypothetical protein YP_001918884.1 PFAM: protein of unknown function DUF218; KEGG: swo:Swol_0732 hypothetical protein YP_001918885.1 KEGG: hha:Hhal_1560 hypothetical protein YP_001918886.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: dsy:DSY2918 hypothetical protein YP_001918887.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; forms a heterodimer with subunit 1 to form the P protein YP_001918888.1 PFAM: glycine cleavage system P-protein; KEGG: amt:Amet_1356 glycine dehydrogenase subunit 1 YP_001918889.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: oih:OB2388 glycine cleavage system protein H YP_001918890.1 TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: bha:BH2816 glycine cleavage system aminomethyltransferase T YP_001918891.1 PFAM: D-aminoacylase domain protein; Amidohydrolase 3; KEGG: pab:PAB0090 D-aminoacylase (aspartate, glutamate etc) YP_001918892.1 KEGG: amt:Amet_2065 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001918893.1 KEGG: amt:Amet_2064 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001918894.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amt:Amet_2063 binding-protein-dependent transport systems inner membrane component YP_001918895.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amt:Amet_2062 binding-protein-dependent transport systems inner membrane component YP_001918896.1 PFAM: extracellular solute-binding protein family 5; KEGG: amt:Amet_2061 extracellular solute-binding protein, family 5 YP_001918897.1 TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: nca:Noca_3382 putative agmatinase YP_001918898.1 TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase; KEGG: swo:Swol_1277 hypothetical protein YP_001918899.1 KEGG: drm:Dred_1687 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_001918900.1 TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; KEGG: swo:Swol_1279 hypothetical protein YP_001918901.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: cac:CAC2651 dihydroorotate dehydrogenase electron transfer subunit YP_001918902.1 KEGG: sat:SYN_01533 dihydroorotase; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; Amidohydrolase 3 YP_001918903.1 KEGG: drm:Dred_1681 aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain YP_001918904.1 PFAM: phosphoribosyltransferase; KEGG: pth:PTH_1813 pyrimidine operon attenuation protein/uracil phosphoribosyltransferase YP_001918905.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: tex:Teth514_0910 amino acid carrier protein YP_001918906.1 PFAM: major facilitator superfamily MFS_1; KEGG: amt:Amet_0800 major facilitator superfamily MFS_1 YP_001918907.1 KEGG: bha:BH0421 N-acetylglucosamine-6-phosphate deacetylase; TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; PFAM: amidohydrolase YP_001918908.1 KEGG: sma:SAV6027 integral membrane protein YP_001918909.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: bcy:Bcer98_0479 amidohydrolase YP_001918910.1 TIGRFAM: glucosamine-6-phosphate isomerase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: tpd:Teth39_0992 glucosamine-6-phosphate isomerase YP_001918911.1 TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain; KEGG: smu:SMU.980 putative PTS system, beta-glucoside-specific EII component YP_001918912.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: Haloacid dehalogenase domain protein hydrolase; HAD-superfamily hydrolase subfamily IB hypothetical 1; KEGG: tte:TTE2448 phosphoserine phosphatase YP_001918913.1 PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: amt:Amet_1660 pyruvate ferredoxin/flavodoxin oxidoreductase YP_001918914.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; thiamine pyrophosphate protein domain protein TPP-binding; KEGG: amt:Amet_1661 indolepyruvate ferredoxin oxidoreductase YP_001918916.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: swo:Swol_1977 hypothetical protein YP_001918917.1 TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Ferrous iron transport B domain protein; nucleoside recognition domain protein; KEGG: mvn:Mevan_1194 GTP-binding protein HSR1-related YP_001918918.1 PFAM: conserved hypothetical protein; KEGG: mvn:Mevan_1193 conserved hypothetical protein 374 YP_001918919.1 KEGG: mvn:Mevan_1192 hypothetical protein YP_001918920.1 PFAM: peptidase M20; KEGG: amt:Amet_0483 peptidase M20 YP_001918921.1 KEGG: dde:Dde_3025 hypothetical protein YP_001918922.1 KEGG: bha:BH0351 oligopeptide ABC transporter (ATP-binding protein); TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001918923.1 KEGG: bcl:ABC3658 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001918924.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0349 oligopeptide ABC transporter (permease) YP_001918925.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bha:BH0348 oligopeptide ABC transporter (permease) YP_001918926.1 PFAM: extracellular solute-binding protein family 5; KEGG: bha:BH0347 oligopeptide ABC transporter (oligopeptide-binding protein) YP_001918927.1 KEGG: cyb:CYB_1965 peptidase, M20D family; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_001918928.1 PFAM: peptidase M20; KEGG: amt:Amet_0483 peptidase M20 YP_001918929.1 KEGG: amt:Amet_2910 hypothetical protein YP_001918930.1 KEGG: tte:TTE2526 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001918931.1 KEGG: aoe:Clos_1344 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_001918932.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amt:Amet_2913 binding-protein-dependent transport systems inner membrane component YP_001918933.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amt:Amet_2914 binding-protein-dependent transport systems inner membrane component YP_001918934.1 PFAM: extracellular solute-binding protein family 5; KEGG: cbe:Cbei_3981 extracellular solute-binding protein, family 5 YP_001918935.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: shm:Shewmr7_3231 response regulator receiver modulated metal dependent phosphohydrolase YP_001918936.1 KEGG: nph:NP4048A hypothetical protein YP_001918937.1 KEGG: cac:CAC2841 conserved membrane protein, probable transporter, YPAA B.subtilis ortholog YP_001918938.1 PFAM: iron dependent repressor; KEGG: amt:Amet_1643 iron dependent repressor YP_001918939.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bha:BH1389 ABC transporter (ATP-binding protein) YP_001918940.1 PFAM: ABC-3 protein; KEGG: amt:Amet_1645 ABC-3 protein YP_001918941.1 PFAM: periplasmic solute binding protein; KEGG: amt:Amet_1646 periplasmic solute binding protein YP_001918942.1 PFAM: major facilitator superfamily MFS_1; KEGG: btk:BT9727_3266 major facilitator family transporter YP_001918943.1 PFAM: Domain of unknown function DUF1848; KEGG: chy:CHY_2128 hypothetical protein YP_001918944.1 PFAM: protein of unknown function DUF6 transmembrane; Protein of unknown function DUF250; KEGG: mac:MA3243 integral membrane protein YP_001918945.1 PFAM: gamma-glutamyltranspeptidase; KEGG: bha:BH0867 cephalosporin acylase YP_001918947.1 PFAM: L-lactate permease; KEGG: har:HEAR2485 putative lactate permease family protein YP_001918948.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: bcl:ABC0348 major facilitator (MFS) superfamily protein YP_001918949.1 PFAM: UvrD/REP helicase; KEGG: prw:PsycPRwf_0254 UvrD/REP helicase YP_001918950.1 PFAM: sodium:dicarboxylate symporter; KEGG: amt:Amet_3182 sodium:dicarboxylate symporter YP_001918952.1 KEGG: cno:NT01CX_1637 predicted membrane protein YP_001918953.1 KEGG: bcl:ABC3329 imidazolonepropionase; TIGRFAM: imidazolonepropionase; PFAM: amidohydrolase; Amidohydrolase 3 YP_001918954.1 KEGG: pmo:Pmob_0241 glutamate formiminotransferase; TIGRFAM: glutamate formiminotransferase; PFAM: Formiminotransferase domain protein; Formiminotransferase domain protein YP_001918955.1 catalyzes the formation of 4-imidazolone-5-propanoate from urocanate during histidine metabolism YP_001918956.1 KEGG: tpd:Teth39_1488 histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase YP_001918957.1 KEGG: cac:CAC2490 Xre family DNA-binding domain and TPR repeats containing protein YP_001918958.1 PFAM: peptidase S41; KEGG: drm:Dred_3070 carboxyl-terminal protease YP_001918959.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: drm:Dred_1962 hypothetical protein YP_001918960.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: pfu:PF0109 hypothetical protein YP_001918962.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IB (PSPase-like); 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; PFAM: HAD-superfamily hydrolase subfamily IB hypothetical 1; KEGG: dsy:DSY1404 hypothetical protein YP_001918963.1 PFAM: acriflavin resistance protein; KEGG: amt:Amet_0188 acriflavin resistance protein YP_001918964.1 PFAM: transposase IS3/IS911 family protein; KEGG: bcy:Bcer98_2284 transposase IS3/IS911 family protein YP_001918965.1 PFAM: Integrase catalytic region; KEGG: pth:PTH_2713 hypothetical protein YP_001918966.1 TIGRFAM: magnesium transporter; PFAM: CBS domain containing protein; MgtE integral membrane region; MgtE intracellular region; KEGG: amt:Amet_3246 magnesium transporter YP_001918967.1 KEGG: tte:TTE0174 flagellum-specific muramidase YP_001918968.1 TIGRFAM: flagellar basal-body rod protein FlgG; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: bbu:BB0774 flagellar basal body rod protein FlgG YP_001918969.1 PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein; KEGG: baf:BAPKO_0824 flagellar hook-basal body complex protein YP_001918970.1 TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell division protein FtsA; cell shape determining protein MreB/Mrl; KEGG: mta:Moth_2371 cell shape determining protein, MreB/Mrl family YP_001918971.1 TIGRFAM: sporulation transcriptional regulator SpoIIID; KEGG: hmo:HM1_1113 stage III sporulation protein D YP_001918972.1 PFAM: Peptidase M23; KEGG: csc:Csac_2338 peptidase M23B YP_001918973.1 PFAM: RNA-directed DNA polymerase (Reverse transcriptase); Group II intron maturase-specific domain protein; KEGG: pth:PTH_2468 retron-type reverse transcriptase YP_001918974.1 TIGRFAM: SpoIID/LytB domain protein; stage II sporulation protein D; PFAM: Stage II sporulation D domain protein; KEGG: pth:PTH_2809 hypothetical membrane protein YP_001918975.1 TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); KEGG: amt:Amet_0358 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_001918976.1 KEGG: tpd:Teth39_2101 hypothetical protein YP_001918977.1 PFAM: protein of unknown function DUF1694; KEGG: drm:Dred_0426 protein of unknown function DUF1694 YP_001918978.1 TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: H+transporting two-sector ATPase delta/epsilon subunit; KEGG: swo:Swol_2381 ATP synthase F1, epsilon subunit YP_001918979.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit YP_001918980.1 KEGG: chy:CHY_2546 F0F1 ATP synthase subunit gamma; TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit YP_001918981.1 KEGG: chy:CHY_2547 ATP synthase F1, alpha subunit; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; ATP synthase F1 alpha subunit YP_001918982.1 TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: amt:Amet_0350 ATP synthase F1, delta subunit YP_001918983.1 TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: tte:TTE0633 F0F1-type ATP synthase B subunit YP_001918984.1 produces ATP from ADP in the presence of a proton gradient across the membrane; subunit C is part of the membrane proton channel F0 YP_001918985.1 TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: amt:Amet_0347 ATP synthase F0, C subunit YP_001918986.1 TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: aoe:Clos_2566 ATP synthase F0, A subunit YP_001918987.1 KEGG: amt:Amet_0345 hypothetical protein YP_001918988.1 TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; PFAM: amino acid-binding ACT domain protein; serine dehydratase beta chain; KEGG: tex:Teth514_1420 L-serine dehydratase, iron-sulfur-dependent, beta subunit YP_001918989.1 KEGG: cpr:CPR_2643 L-serine dehydratase, iron-sulfur-dependent, alpha subunit; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit; PFAM: serine dehydratase alpha chain YP_001918990.1 PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: csc:Csac_1006 UDP-N-acetylglucosamine 2-epimerase YP_001918991.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: chy:CHY_2556 putative ComE operon protein 2 YP_001918992.1 KEGG: aoe:Clos_2572 uracil phosphoribosyltransferase; TIGRFAM: uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_001918993.1 PFAM: Orn/Lys/Arg decarboxylase major region; glycine hydroxymethyltransferase; aminotransferase class I and II; KEGG: gtn:GTNG_3314 serine hydroxymethyltransferase YP_001918994.1 KEGG: cno:NT01CX_0543 ribose-5-phosphate isomerase B; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase YP_001918995.1 PFAM: histidine kinase HAMP region domain protein; chemotaxis sensory transducer; KEGG: tte:TTE1777 methyl-accepting chemotaxis protein YP_001918996.1 PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: chy:CHY_2559 low molecular weight protein-tyrosine-phosphatase YP_001918997.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5 domain protein; SUA5/yciO/yrdC domain; KEGG: drm:Dred_3166 SUA5/YciO/YrdC/YwlC family protein YP_001918998.1 KEGG: wsu:WS0137 NCAIR mutase (PurE)-related protein YP_001918999.1 PFAM: protein of unknown function DUF111; KEGG: cth:Cthe_0369 protein of unknown function DUF111 YP_001919000.1 PFAM: ExsB family protein; KEGG: chy:CHY_1281 conserved hypothetical protein TIGR00268 YP_001919001.1 PFAM: YibE/F family protein; KEGG: amt:Amet_1101 YibE/F family protein YP_001919002.1 PFAM: ferric-uptake regulator; KEGG: cbf:CLI_2623 transcriptional regulator, Fur family YP_001919003.1 TIGRFAM: Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter; PhoU family protein; KEGG: aoe:Clos_2109 Na/Pi-cotransporter II-related protein YP_001919004.1 KEGG: cdf:CD3564 stage II sporulation protein YP_001919005.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor is responsible for the expression of sporulation specific genes and is expressed after engulfment; this factor is involved in the transcription of small acid-soluble proteins involved in protecting the forespore chromatin YP_001919006.1 TIGRFAM: modification methylase, HemK family; protein-(glutamine-N5) methyltransferase, release factor-specific; PFAM: methyltransferase small; KEGG: cac:CAC2885 S-adenosylmethionine-dependent methyltransferase, HEMK ortholog YP_001919007.1 TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: chy:CHY_2563 peptide chain release factor 1 YP_001919008.1 PFAM: protein of unknown function DUF1385; KEGG: aoe:Clos_2582 protein of unknown function DUF1385 YP_001919009.1 PFAM: ribosomal protein L31; KEGG: gka:GK3381 50S ribosomal protein L31 YP_001919010.1 KEGG: gka:GK3382 transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor domain protein; Rho termination factor RNA-binding; Ribonuclease B OB region domain; SMART: AAA ATPase; Cold shock protein YP_001919011.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese YP_001919012.1 KEGG: fno:Fnod_1229 putative transaldolase; TIGRFAM: transaldolase; PFAM: Transaldolase YP_001919013.1 KEGG: hmo:HM1_1076 fructose-1,6-bisphosphate aldolase, class II; TIGRFAM: ketose-bisphosphate aldolase; fructose-1,6-bisphosphate aldolase, class II; PFAM: ketose-bisphosphate aldolase class-II YP_001919014.1 PFAM: response regulator receiver; KEGG: gsu:GSU0598 sigma-54 dependent DNA-binding response regulator YP_001919015.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: amt:Amet_4790 phenazine biosynthesis protein PhzF family YP_001919016.1 KEGG: aoe:Clos_0297 ATP-grasp protein-like protein YP_001919017.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: aoe:Clos_2461 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_001919018.1 KEGG: cth:Cthe_1215 permease YP_001919019.1 KEGG: hmo:HM1_0454 permease, putative YP_001919020.1 TIGRFAM: penicillin-binding protein, 1A family; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase; KEGG: drm:Dred_2100 penicillin-binding protein, 1A family YP_001919021.1 KEGG: aoe:Clos_0418 lysine 2,3-aminomutase YodO family protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; PFAM: Radical SAM domain protein YP_001919022.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer YP_001919023.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: amt:Amet_4627 ABC transporter related YP_001919024.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: amt:Amet_4628 binding-protein-dependent transport systems inner membrane component YP_001919025.1 PFAM: extracellular solute-binding protein family 1; KEGG: amt:Amet_4629 extracellular solute-binding protein, family 1 YP_001919026.1 PFAM: peptidase S58 DmpA; KEGG: amt:Amet_1884 peptidase S58, DmpA YP_001919027.1 KEGG: ckl:CKL_0741 predicted flavodoxin YP_001919028.1 KEGG: aoe:Clos_0022 SirA family protein YP_001919029.1 PFAM: protein of unknown function DUF163; KEGG: ssu:SSU05_2191 hypothetical protein YP_001919030.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; KEGG: chy:CHY_0057 putative serine protease Do YP_001919031.1 PFAM: beta-lactamase domain protein; KEGG: cbf:CLI_3788 metallo-beta-lactamase family protein YP_001919032.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mba:Mbar_A2721 hypothetical protein YP_001919033.1 PFAM: Phosphoglycerate mutase; KEGG: drm:Dred_1908 phosphoglycerate mutase YP_001919034.1 KEGG: pca:Pcar_1498 conserved ferredoxin domain protein YP_001919035.1 KEGG: amt:Amet_4754 hypothetical protein YP_001919036.1 KEGG: bcl:ABC4097 hypothetical protein YP_001919037.1 KEGG: tte:TTE2688 sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein YP_001919038.1 PFAM: response regulator receiver; transcriptional regulator domain protein; KEGG: spn:SP_1227 DNA-binding response regulator YP_001919039.1 PFAM: protein of unknown function DUF1312; KEGG: dsy:DSY0850 hypothetical protein YP_001919040.1 PFAM: Peptidoglycan-binding LysM; G5 domain protein; Peptidase M23; KEGG: amt:Amet_4761 peptidase M23B YP_001919041.1 PFAM: extracellular solute-binding protein family 5; KEGG: amt:Amet_2915 extracellular solute-binding protein, family 5 YP_001919042.1 PFAM: sodium/glutamate symporter; KEGG: mbu:Mbur_1785 sodium/glutamate symporter YP_001919043.1 PFAM: adenylosuccinate synthetase; KEGG: gtn:GTNG_3416 adenylosuccinate synthetase YP_001919044.1 KEGG: bcy:Bcer98_4008 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: AAA ATPase YP_001919045.1 PFAM: ribosomal protein L9; KEGG: dsy:DSY5031 50S ribosomal protein L9 YP_001919046.1 KEGG: bcy:Bcer98_4011 hypothetical protein YP_001919047.1 KEGG: pth:PTH_2889 hypothetical protein YP_001919048.1 PFAM: ribosomal protein S18; KEGG: cno:NT01CX_0885 30S ribosomal protein S18 YP_001919049.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mta:Moth_0129 single-strand binding protein YP_001919050.1 PFAM: ribosomal protein S6; KEGG: dsy:DSY5036 30S ribosomal protein S6 YP_001919051.1 TIGRFAM: GTP-binding protein YchF; PFAM: GTP-binding protein HSR1-related; Protein of unknown function DUF933; KEGG: cth:Cthe_0877 translation-associated GTPase YP_001919052.1 PFAM: protein of unknown function DUF951; KEGG: cac:CAC3725 uncharacterized protein, homolog of Streptococcus pneumoniae (gi:2109447) YP_001919055.1 PFAM: TPR repeat-containing protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: ter:Tery_0481 TPR repeat YP_001919056.1 TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256; KEGG: bsu:BSU40950 hypothetical protein YP_001919057.1 PFAM: protein of unknown function DUF583; KEGG: tte:TTE0840 hypothetical protein YP_001919058.1 PFAM: Peptidase M23; KEGG: afw:Anae109_0778 peptidase M23B YP_001919059.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: amt:Amet_4791 ParB-like partition protein YP_001919060.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: bpu:BPUM_3728 chromosome partitioning protein transcriptional regulator YP_001919061.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: btl:BALH_4988 stage 0 sporulation protein J YP_001919062.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; KEGG: lmo:lmo2802 glucose-inhibited division protein B YP_001919063.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs YP_001919064.1 TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; Ras family protein; KEGG: lsl:LSL_0123 tRNA modification GTPase TrmE YP_001919065.1 PFAM: single-stranded nucleic acid binding R3H domain protein; KEGG: drm:Dred_3325 single-stranded nucleic acid binding R3H domain protein YP_001919066.1 PFAM: 60 kDa inner membrane insertion protein; KEGG: amt:Amet_4799 60 kDa inner membrane insertion protein YP_001919067.1 PFAM: protein of unknown function DUF37; KEGG: fnu:FN0003 alpha-hemolysin YP_001919068.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: aoe:Clos_2876 ribonuclease P protein component YP_001919069.1 PFAM: ribosomal protein L34; KEGG: cbf:CLI_3893 ribosomal protein L34 YP_001922722.1 KEGG: cpy:Cphy_3144 hypothetical protein YP_001922723.1 KEGG: pfa:PFB0145c hypothetical protein YP_001922724.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: pmo:Pmob_1156 HNH endonuclease YP_001922725.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: ccv:CCV52592_1543 hypothetical protein YP_001922726.1 PFAM: integrase family protein; KEGG: dsy:DSY0841 hypothetical protein YP_001922728.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: pmo:Pmob_1156 HNH endonuclease YP_001922729.1 KEGG: gka:GKP04 replication protein YP_001922730.1 KEGG: lga:LGAS_1707 toxin-antitoxin addiction module toxin component MazF (an endoRNAse)