-- dump date 20120504_153849 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_571539.1 92109251 4025394 99..1436 1 NC_007959.1 transposase, IS4 1436 4025394 Nham_4041 Nitrobacter hamburgensis X14 transposase, IS4 YP_571539.1 99 D 323097 CDS YP_571540.1 92109252 4025396 2346..2672 1 NC_007959.1 nitrogen regulatory protein P-II (GlnB, GlnK) 2672 4025396 Nham_4043 Nitrobacter hamburgensis X14 nitrogen regulatory protein P-II (GlnB, GlnK) YP_571540.1 2346 D 323097 CDS YP_571541.1 92109253 4025397 complement(2613..3593) 1 NC_007959.1 LysR family transcriptional regulator 3593 4025397 Nham_4044 Nitrobacter hamburgensis X14 LysR family transcriptional regulator YP_571541.1 2613 R 323097 CDS YP_571542.1 92109254 4025399 4067..5104 1 NC_007959.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 5104 4025399 Nham_4046 Nitrobacter hamburgensis X14 fructose-1,6-bisphosphatase YP_571542.1 4067 D 323097 CDS YP_571543.1 92109255 4025400 5125..5997 1 NC_007959.1 phosphoribulokinase/uridine kinase 5997 4025400 Nham_4047 Nitrobacter hamburgensis X14 phosphoribulokinase/uridine kinase YP_571543.1 5125 D 323097 CDS YP_571544.1 92109256 4025401 6119..7204 1 NC_007959.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 7204 4025401 Nham_4048 Nitrobacter hamburgensis X14 fructose-1,6-bisphosphate aldolase YP_571544.1 6119 D 323097 CDS YP_571545.1 92109257 4025375 7266..8732 1 NC_007959.1 type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase 8732 rbcL 4025375 rbcL Nitrobacter hamburgensis X14 ribulose bisophosphate carboxylase YP_571545.1 7266 D 323097 CDS YP_571546.1 92109258 4025376 8746..9171 1 NC_007959.1 ribulose bisphosphate carboxylase, small chain 9171 4025376 Nham_4050 Nitrobacter hamburgensis X14 ribulose bisphosphate carboxylase, small chain YP_571546.1 8746 D 323097 CDS YP_571547.1 92109259 4025377 9324..10238 1 NC_007959.1 AAA ATPase, central region 10238 4025377 Nham_4051 Nitrobacter hamburgensis X14 AAA ATPase, central region YP_571547.1 9324 D 323097 CDS YP_571548.1 92109260 4025378 12046..12357 1 NC_007959.1 XRE family transcriptional regulator 12357 4025378 Nham_4052 Nitrobacter hamburgensis X14 XRE family transcriptional regulator YP_571548.1 12046 D 323097 CDS YP_571549.1 92109261 4025379 12595..12999 1 NC_007959.1 hypothetical protein 12999 4025379 Nham_4053 Nitrobacter hamburgensis X14 hypothetical protein YP_571549.1 12595 D 323097 CDS YP_571550.1 92109262 4025380 complement(13284..16784) 1 NC_007959.1 hypothetical protein 16784 4025380 Nham_4054 Nitrobacter hamburgensis X14 hypothetical protein YP_571550.1 13284 R 323097 CDS YP_571551.1 92109263 4025382 complement(19058..20899) 1 NC_007959.1 HipA-like 20899 4025382 Nham_4056 Nitrobacter hamburgensis X14 HipA-like YP_571551.1 19058 R 323097 CDS YP_571552.1 92109264 4025383 21080..22096 1 NC_007959.1 hypothetical protein 22096 4025383 Nham_4057 Nitrobacter hamburgensis X14 hypothetical protein YP_571552.1 21080 D 323097 CDS YP_571553.1 92109265 4025384 complement(22196..23470) 1 NC_007959.1 transposase, mutator type 23470 4025384 Nham_4058 Nitrobacter hamburgensis X14 transposase, mutator type YP_571553.1 22196 R 323097 CDS YP_571554.1 92109266 4025386 complement(24401..25291) 1 NC_007959.1 hypothetical protein 25291 4025386 Nham_4060 Nitrobacter hamburgensis X14 hypothetical protein YP_571554.1 24401 R 323097 CDS YP_571555.1 92109267 4025391 complement(27131..27364) 1 NC_007959.1 hypothetical protein 27364 4025391 Nham_4065 Nitrobacter hamburgensis X14 hypothetical protein YP_571555.1 27131 R 323097 CDS YP_571556.1 92109268 4025392 27394..27909 1 NC_007959.1 hypothetical protein 27909 4025392 Nham_4066 Nitrobacter hamburgensis X14 hypothetical protein YP_571556.1 27394 D 323097 CDS YP_571557.1 92109269 4025393 complement(28065..28751) 1 NC_007959.1 GCN5-related N-acetyltransferase 28751 4025393 Nham_4067 Nitrobacter hamburgensis X14 GCN5-related N-acetyltransferase YP_571557.1 28065 R 323097 CDS YP_571558.1 92109270 4025605 28935..30254 1 NC_007959.1 major facilitator superfamily permease 30254 4025605 Nham_4068 Nitrobacter hamburgensis X14 major facilitator superfamily permease YP_571558.1 28935 D 323097 CDS YP_571559.1 92109271 4025608 complement(32442..32696) 1 NC_007959.1 hypothetical protein 32696 4025608 Nham_4071 Nitrobacter hamburgensis X14 hypothetical protein YP_571559.1 32442 R 323097 CDS YP_571560.1 92109272 4025609 33953..35374 1 NC_007959.1 cytochrome bd ubiquinol oxidase, subunit I 35374 4025609 Nham_4072 Nitrobacter hamburgensis X14 cytochrome bd ubiquinol oxidase, subunit I YP_571560.1 33953 D 323097 CDS YP_571561.1 92109273 4025610 35378..36388 1 NC_007959.1 cytochrome d ubiquinol oxidase, subunit II 36388 4025610 Nham_4073 Nitrobacter hamburgensis X14 cytochrome d ubiquinol oxidase, subunit II YP_571561.1 35378 D 323097 CDS YP_571562.1 92109274 4025611 36763..37200 1 NC_007959.1 hypothetical protein 37200 4025611 Nham_4074 Nitrobacter hamburgensis X14 hypothetical protein YP_571562.1 36763 D 323097 CDS YP_571563.1 92109275 4025613 37862..38227 1 NC_007959.1 PRC-barrel 38227 4025613 Nham_4076 Nitrobacter hamburgensis X14 PRC-barrel YP_571563.1 37862 D 323097 CDS YP_571564.1 92109276 4025614 38670..39788 1 NC_007959.1 hypothetical protein 39788 4025614 Nham_4077 Nitrobacter hamburgensis X14 hypothetical protein YP_571564.1 38670 D 323097 CDS YP_571565.1 92109277 4025615 39970..40446 1 NC_007959.1 Ferritin and Dps 40446 4025615 Nham_4078 Nitrobacter hamburgensis X14 Ferritin and Dps YP_571565.1 39970 D 323097 CDS YP_571566.1 92109278 4025616 40531..43485 1 NC_007959.1 aconitate hydratase 1 43485 4025616 Nham_4079 Nitrobacter hamburgensis X14 aconitate hydratase 1 YP_571566.1 40531 D 323097 CDS YP_571567.1 92109279 4025617 43501..43971 1 NC_007959.1 glyoxalase/bleomycin resistance protein/dioxygenase 43971 4025617 Nham_4080 Nitrobacter hamburgensis X14 glyoxalase/bleomycin resistance protein/dioxygenase YP_571567.1 43501 D 323097 CDS YP_571568.1 92109280 4025618 44217..45602 1 NC_007959.1 twin-arginine translocation pathway signal 45602 4025618 Nham_4081 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_571568.1 44217 D 323097 CDS YP_571569.1 92109281 4025619 45608..45973 1 NC_007959.1 hypothetical protein 45973 4025619 Nham_4082 Nitrobacter hamburgensis X14 hypothetical protein YP_571569.1 45608 D 323097 CDS YP_571570.1 92109282 4025622 48858..49952 1 NC_007959.1 tISRso5; ISRSO5-transposase protein 49952 4025622 Nham_4085 Nitrobacter hamburgensis X14 tISRso5; ISRSO5-transposase protein YP_571570.1 48858 D 323097 CDS YP_571571.1 92109283 4025623 complement(50075..50698) 1 NC_007959.1 hypothetical protein 50698 4025623 Nham_4086 Nitrobacter hamburgensis X14 hypothetical protein YP_571571.1 50075 R 323097 CDS YP_571572.1 92109284 4025624 50727..51122 1 NC_007959.1 hypothetical protein 51122 4025624 Nham_4087 Nitrobacter hamburgensis X14 hypothetical protein YP_571572.1 50727 D 323097 CDS YP_571573.1 92109285 4025403 51496..51960 1 NC_007959.1 hypothetical protein 51960 4025403 Nham_4089 Nitrobacter hamburgensis X14 hypothetical protein YP_571573.1 51496 D 323097 CDS YP_571574.1 92109286 4025404 complement(52170..52322) 1 NC_007959.1 hypothetical protein 52322 4025404 Nham_4090 Nitrobacter hamburgensis X14 hypothetical protein YP_571574.1 52170 R 323097 CDS YP_571575.1 92109287 4025405 complement(52324..52605) 1 NC_007959.1 hypothetical protein 52605 4025405 Nham_4091 Nitrobacter hamburgensis X14 hypothetical protein YP_571575.1 52324 R 323097 CDS YP_571576.1 92109288 4025406 53683..54978 1 NC_007959.1 integrase catalytic subunit 54978 4025406 Nham_4092 Nitrobacter hamburgensis X14 integrase catalytic subunit YP_571576.1 53683 D 323097 CDS YP_571577.1 92109289 4025407 complement(55228..55992) 1 NC_007959.1 transposase, IS4 55992 4025407 Nham_4093 Nitrobacter hamburgensis X14 transposase, IS4 YP_571577.1 55228 R 323097 CDS YP_571578.1 92109290 4025411 59805..60113 1 NC_007959.1 hypothetical protein 60113 4025411 Nham_4097 Nitrobacter hamburgensis X14 hypothetical protein YP_571578.1 59805 D 323097 CDS YP_571579.1 92109291 4025415 64068..64772 1 NC_007959.1 hypothetical protein 64772 4025415 Nham_4101 Nitrobacter hamburgensis X14 hypothetical protein YP_571579.1 64068 D 323097 CDS YP_571580.1 92109292 4025416 65770..66132 1 NC_007959.1 PRC-barrel 66132 4025416 Nham_4102 Nitrobacter hamburgensis X14 PRC-barrel YP_571580.1 65770 D 323097 CDS YP_571581.1 92109293 4025417 complement(66461..66712) 1 NC_007959.1 hypothetical protein 66712 4025417 Nham_4103 Nitrobacter hamburgensis X14 hypothetical protein YP_571581.1 66461 R 323097 CDS YP_571582.1 92109294 4025418 complement(66725..67234) 1 NC_007959.1 isoprenylcysteine carboxyl methyltransferase 67234 4025418 Nham_4104 Nitrobacter hamburgensis X14 isoprenylcysteine carboxyl methyltransferase YP_571582.1 66725 R 323097 CDS YP_571583.1 92109295 4025419 complement(67231..68415) 1 NC_007959.1 chalcone and stilbene synthases-like 68415 4025419 Nham_4105 Nitrobacter hamburgensis X14 chalcone and stilbene synthases-like YP_571583.1 67231 R 323097 CDS YP_571584.1 92109296 4025420 complement(68424..68915) 1 NC_007959.1 pyridoxamine 5'-phosphate oxidase-related, FMN-binding 68915 4025420 Nham_4106 Nitrobacter hamburgensis X14 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_571584.1 68424 R 323097 CDS YP_571585.1 92109297 4025723 complement(69075..69317) 1 NC_007959.1 hypothetical protein 69317 4025723 Nham_4107 Nitrobacter hamburgensis X14 hypothetical protein YP_571585.1 69075 R 323097 CDS YP_571586.1 92109298 4025725 70218..70475 1 NC_007959.1 hypothetical protein 70475 4025725 Nham_4109 Nitrobacter hamburgensis X14 hypothetical protein YP_571586.1 70218 D 323097 CDS YP_571587.1 92109299 4025726 70445..71398 1 NC_007959.1 cation diffusion facilitator family transporter 71398 4025726 Nham_4110 Nitrobacter hamburgensis X14 cation diffusion facilitator family transporter YP_571587.1 70445 D 323097 CDS YP_571588.1 92109300 4025727 complement(71561..72025) 1 NC_007959.1 hypothetical protein 72025 4025727 Nham_4111 Nitrobacter hamburgensis X14 hypothetical protein YP_571588.1 71561 R 323097 CDS YP_571589.1 92109301 4025728 complement(72006..72449) 1 NC_007959.1 hypothetical protein 72449 4025728 Nham_4112 Nitrobacter hamburgensis X14 hypothetical protein YP_571589.1 72006 R 323097 CDS YP_571590.1 92109302 4025729 complement(72563..72934) 1 NC_007959.1 hypothetical protein 72934 4025729 Nham_4113 Nitrobacter hamburgensis X14 hypothetical protein YP_571590.1 72563 R 323097 CDS YP_571591.1 92109303 4025730 complement(72935..73768) 1 NC_007959.1 hypothetical protein 73768 4025730 Nham_4114 Nitrobacter hamburgensis X14 hypothetical protein YP_571591.1 72935 R 323097 CDS YP_571592.1 92109304 4025731 73771..74031 1 NC_007959.1 transposase 74031 4025731 Nham_4115 Nitrobacter hamburgensis X14 transposase YP_571592.1 73771 D 323097 CDS YP_571593.1 92109305 4025732 74464..74946 1 NC_007959.1 hypothetical protein 74946 4025732 Nham_4116 Nitrobacter hamburgensis X14 hypothetical protein YP_571593.1 74464 D 323097 CDS YP_571594.1 92109306 4025733 complement(75034..75471) 1 NC_007959.1 transposase, IS4 75471 4025733 Nham_4117 Nitrobacter hamburgensis X14 transposase, IS4 YP_571594.1 75034 R 323097 CDS YP_571595.1 92109307 4025734 complement(75542..76864) 1 NC_007959.1 RNA-directed DNA polymerase (Reverse transcriptase) 76864 4025734 Nham_4118 Nitrobacter hamburgensis X14 RNA-directed DNA polymerase (Reverse transcriptase) YP_571595.1 75542 R 323097 CDS YP_571596.1 92109308 4025735 complement(77293..77769) 1 NC_007959.1 transposase (IS12528) 77769 4025735 Nham_4119 Nitrobacter hamburgensis X14 transposase (IS12528) YP_571596.1 77293 R 323097 CDS YP_571597.1 92109309 4025736 77856..78980 1 NC_007959.1 transposase IS116/IS110/IS902 78980 4025736 Nham_4120 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_571597.1 77856 D 323097 CDS YP_571598.1 92109310 4025737 complement(79502..79672) 1 NC_007959.1 hypothetical protein 79672 4025737 Nham_4121 Nitrobacter hamburgensis X14 hypothetical protein YP_571598.1 79502 R 323097 CDS YP_571599.1 92109311 4025738 complement(80231..81343) 1 NC_007959.1 transposase 81343 4025738 Nham_4122 Nitrobacter hamburgensis X14 transposase YP_571599.1 80231 R 323097 CDS YP_571600.1 92109312 4025740 82237..82773 1 NC_007959.1 hypothetical protein 82773 4025740 Nham_4124 Nitrobacter hamburgensis X14 hypothetical protein YP_571600.1 82237 D 323097 CDS YP_571601.1 92109313 4025742 83063..83356 1 NC_007959.1 hypothetical protein 83356 4025742 Nham_4126 Nitrobacter hamburgensis X14 hypothetical protein YP_571601.1 83063 D 323097 CDS YP_571602.1 92109314 4025422 complement(85101..85646) 1 NC_007959.1 hypothetical protein 85646 4025422 Nham_4128 Nitrobacter hamburgensis X14 hypothetical protein YP_571602.1 85101 R 323097 CDS YP_571603.1 92109315 4025423 86335..86757 1 NC_007959.1 PRC-barrel 86757 4025423 Nham_4129 Nitrobacter hamburgensis X14 PRC-barrel YP_571603.1 86335 D 323097 CDS YP_571604.1 92109316 4025424 86971..88041 1 NC_007959.1 transposase 88041 4025424 Nham_4130 Nitrobacter hamburgensis X14 transposase YP_571604.1 86971 D 323097 CDS YP_571605.1 92109317 4025425 88120..89232 1 NC_007959.1 transposase 89232 4025425 Nham_4131 Nitrobacter hamburgensis X14 transposase YP_571605.1 88120 D 323097 CDS YP_571606.1 92109318 4025426 89882..91117 1 NC_007959.1 transposase IS116/IS110/IS902 91117 4025426 Nham_4132 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_571606.1 89882 D 323097 CDS YP_571607.1 92109319 4025430 complement(94080..94928) 1 NC_007959.1 hypothetical protein 94928 4025430 Nham_4136 Nitrobacter hamburgensis X14 hypothetical protein YP_571607.1 94080 R 323097 CDS YP_571608.1 92109320 4025432 complement(96722..97702) 1 NC_007959.1 integrase catalytic subunit 97702 4025432 Nham_4138 Nitrobacter hamburgensis X14 integrase catalytic subunit YP_571608.1 96722 R 323097 CDS YP_571609.1 92109321 4025526 97804..98853 1 NC_007959.1 transposase IS116/IS110/IS902 98853 4025526 Nham_4139 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_571609.1 97804 D 323097 CDS YP_571610.1 92109322 4025527 complement(99034..99435) 1 NC_007959.1 transposase IS3/IS911 99435 4025527 Nham_4140 Nitrobacter hamburgensis X14 transposase IS3/IS911 YP_571610.1 99034 R 323097 CDS YP_571611.1 92109323 4025531 101188..103593 1 NC_007959.1 GAF sensor protein 103593 4025531 Nham_4144 Nitrobacter hamburgensis X14 GAF sensor protein YP_571611.1 101188 D 323097 CDS YP_571612.1 92109324 4025532 103919..104608 1 NC_007959.1 hypothetical protein 104608 4025532 Nham_4145 Nitrobacter hamburgensis X14 hypothetical protein YP_571612.1 103919 D 323097 CDS YP_571613.1 92109325 4025585 104727..105482 1 NC_007959.1 hypothetical protein 105482 4025585 Nham_4146 Nitrobacter hamburgensis X14 hypothetical protein YP_571613.1 104727 D 323097 CDS YP_571614.1 92109326 4025586 complement(105526..105750) 1 NC_007959.1 hypothetical protein 105750 4025586 Nham_4147 Nitrobacter hamburgensis X14 hypothetical protein YP_571614.1 105526 R 323097 CDS YP_571615.1 92109327 4025587 106152..106316 1 NC_007959.1 hypothetical protein 106316 4025587 Nham_4148 Nitrobacter hamburgensis X14 hypothetical protein YP_571615.1 106152 D 323097 CDS YP_571616.1 92109328 4025588 complement(106313..107389) 1 NC_007959.1 transposase, IS4 107389 4025588 Nham_4149 Nitrobacter hamburgensis X14 transposase, IS4 YP_571616.1 106313 R 323097 CDS YP_571617.1 92109329 4025591 complement(109272..109673) 1 NC_007959.1 PRC-barrel 109673 4025591 Nham_4152 Nitrobacter hamburgensis X14 PRC-barrel YP_571617.1 109272 R 323097 CDS YP_571618.1 92109330 4025593 complement(111803..112012) 1 NC_007959.1 CsbD-like 112012 4025593 Nham_4154 Nitrobacter hamburgensis X14 CsbD-like YP_571618.1 111803 R 323097 CDS YP_571619.1 92109331 4025594 complement(112224..112595) 1 NC_007959.1 response regulator receiver domain-containing protein 112595 4025594 Nham_4155 Nitrobacter hamburgensis X14 response regulator receiver domain-containing protein YP_571619.1 112224 R 323097 CDS YP_571620.1 92109332 4025596 118362..118868 1 NC_007959.1 hypothetical protein 118868 4025596 Nham_4157 Nitrobacter hamburgensis X14 hypothetical protein YP_571620.1 118362 D 323097 CDS YP_571621.1 92109333 4025598 119921..120301 1 NC_007959.1 hypothetical protein 120301 4025598 Nham_4159 Nitrobacter hamburgensis X14 hypothetical protein YP_571621.1 119921 D 323097 CDS YP_571622.1 92109334 4025599 120469..120702 1 NC_007959.1 hypothetical protein 120702 4025599 Nham_4160 Nitrobacter hamburgensis X14 hypothetical protein YP_571622.1 120469 D 323097 CDS YP_571623.1 92109335 4025601 complement(121755..122012) 1 NC_007959.1 bacterioferritin 122012 4025601 Nham_4162 Nitrobacter hamburgensis X14 bacterioferritin YP_571623.1 121755 R 323097 CDS YP_571624.1 92109336 4025603 122904..124139 1 NC_007959.1 transposase IS116/IS110/IS902 124139 4025603 Nham_4164 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_571624.1 122904 D 323097 CDS YP_571625.1 92109337 4025554 125468..127306 1 NC_007959.1 hypothetical protein 127306 4025554 Nham_4168 Nitrobacter hamburgensis X14 hypothetical protein YP_571625.1 125468 D 323097 CDS YP_571626.1 92109338 4025555 complement(127367..128101) 1 NC_007959.1 hypothetical protein 128101 4025555 Nham_4169 Nitrobacter hamburgensis X14 hypothetical protein YP_571626.1 127367 R 323097 CDS YP_571627.1 92109339 4025556 128195..128395 1 NC_007959.1 hypothetical protein 128395 4025556 Nham_4170 Nitrobacter hamburgensis X14 hypothetical protein YP_571627.1 128195 D 323097 CDS YP_571628.1 92109340 4025558 complement(128836..129198) 1 NC_007959.1 ISSpo6, transposase orf A 129198 4025558 Nham_4172 Nitrobacter hamburgensis X14 ISSpo6, transposase orf A YP_571628.1 128836 R 323097 CDS YP_571629.1 92109341 4025560 complement(130521..132710) 1 NC_007959.1 hypothetical protein 132710 4025560 Nham_4174 Nitrobacter hamburgensis X14 hypothetical protein YP_571629.1 130521 R 323097 CDS YP_571630.1 92109342 4025561 complement(133078..134859) 1 NC_007959.1 glycoside hydrolase 15-related 134859 4025561 Nham_4175 Nitrobacter hamburgensis X14 glycoside hydrolase 15-related YP_571630.1 133078 R 323097 CDS YP_571631.1 92109343 4025562 complement(134928..135923) 1 NC_007959.1 short chain dehydrogenase 135923 4025562 Nham_4176 Nitrobacter hamburgensis X14 short chain dehydrogenase YP_571631.1 134928 R 323097 CDS YP_571632.1 92109344 4025563 complement(135943..136284) 1 NC_007959.1 Caa(3)-type oxidase, subunit IV 136284 4025563 Nham_4177 Nitrobacter hamburgensis X14 Caa(3)-type oxidase, subunit IV YP_571632.1 135943 R 323097 CDS YP_571633.1 92109345 4025564 complement(136281..136916) 1 NC_007959.1 cytochrome c oxidase, subunit III 136916 4025564 Nham_4178 Nitrobacter hamburgensis X14 cytochrome c oxidase, subunit III YP_571633.1 136281 R 323097 CDS YP_571634.1 92109346 4025565 complement(136913..138586) 1 NC_007959.1 cytochrome c oxidase, subunit I 138586 4025565 Nham_4179 Nitrobacter hamburgensis X14 cytochrome c oxidase, subunit I YP_571634.1 136913 R 323097 CDS YP_571635.1 92109347 4025566 complement(138583..139527) 1 NC_007959.1 cytochrome c oxidase, subunit II 139527 4025566 Nham_4180 Nitrobacter hamburgensis X14 cytochrome c oxidase, subunit II YP_571635.1 138583 R 323097 CDS YP_571636.1 92109348 4025567 complement(139527..140315) 1 NC_007959.1 hypothetical protein 140315 4025567 Nham_4181 Nitrobacter hamburgensis X14 hypothetical protein YP_571636.1 139527 R 323097 CDS YP_571637.1 92109349 4025568 complement(140312..140704) 1 NC_007959.1 hypothetical protein 140704 4025568 Nham_4182 Nitrobacter hamburgensis X14 hypothetical protein YP_571637.1 140312 R 323097 CDS YP_571638.1 92109350 4025569 complement(140694..141740) 1 NC_007959.1 hypothetical protein 141740 4025569 Nham_4183 Nitrobacter hamburgensis X14 hypothetical protein YP_571638.1 140694 R 323097 CDS YP_571639.1 92109351 4025570 complement(141737..142258) 1 NC_007959.1 hypothetical protein 142258 4025570 Nham_4184 Nitrobacter hamburgensis X14 hypothetical protein YP_571639.1 141737 R 323097 CDS YP_571640.1 92109352 4025625 complement(142255..142779) 1 NC_007959.1 hypothetical protein 142779 4025625 Nham_4185 Nitrobacter hamburgensis X14 hypothetical protein YP_571640.1 142255 R 323097 CDS YP_571641.1 92109353 4025626 complement(142776..144146) 1 NC_007959.1 polysulphide reductase, NrfD 144146 4025626 Nham_4186 Nitrobacter hamburgensis X14 polysulphide reductase, NrfD YP_571641.1 142776 R 323097 CDS YP_571642.1 92109354 4025627 complement(144143..146986) 1 NC_007959.1 4Fe-4S ferredoxin, iron-sulfur binding 146986 4025627 Nham_4187 Nitrobacter hamburgensis X14 4Fe-4S ferredoxin, iron-sulfur binding YP_571642.1 144143 R 323097 CDS YP_571643.1 92109355 4025628 complement(146983..147639) 1 NC_007959.1 chaperone protein HtpG 147639 4025628 Nham_4188 Nitrobacter hamburgensis X14 chaperone protein HtpG YP_571643.1 146983 R 323097 CDS YP_571644.1 92109356 4025629 complement(147732..148109) 1 NC_007959.1 hypothetical protein 148109 4025629 Nham_4189 Nitrobacter hamburgensis X14 hypothetical protein YP_571644.1 147732 R 323097 CDS YP_571645.1 92109357 4025630 148434..150281 1 NC_007959.1 catalyzes the formation of acetate from pyruvate; thiamine pyrophosphate protein 150281 4025630 Nham_4190 Nitrobacter hamburgensis X14 thiamine pyrophosphate protein YP_571645.1 148434 D 323097 CDS YP_571646.1 92109358 4025631 150283..151377 1 NC_007959.1 mandelate racemase/muconate lactonizing enzyme 151377 4025631 Nham_4191 Nitrobacter hamburgensis X14 mandelate racemase/muconate lactonizing enzyme YP_571646.1 150283 D 323097 CDS YP_571647.1 92109359 4025632 151387..152391 1 NC_007959.1 hypothetical protein 152391 4025632 Nham_4192 Nitrobacter hamburgensis X14 hypothetical protein YP_571647.1 151387 D 323097 CDS YP_571648.1 92109360 4025633 152384..153040 1 NC_007959.1 hypothetical protein 153040 4025633 Nham_4193 Nitrobacter hamburgensis X14 hypothetical protein YP_571648.1 152384 D 323097 CDS YP_571649.1 92109361 4025634 153030..154676 1 NC_007959.1 glucose-methanol-choline oxidoreductase 154676 4025634 Nham_4194 Nitrobacter hamburgensis X14 glucose-methanol-choline oxidoreductase YP_571649.1 153030 D 323097 CDS YP_571650.1 92109362 4025635 complement(154933..155916) 1 NC_007959.1 hypothetical protein 155916 4025635 Nham_4195 Nitrobacter hamburgensis X14 hypothetical protein YP_571650.1 154933 R 323097 CDS YP_571651.1 92109363 4025636 complement(156134..156349) 1 NC_007959.1 hypothetical protein 156349 4025636 Nham_4196 Nitrobacter hamburgensis X14 hypothetical protein YP_571651.1 156134 R 323097 CDS YP_571652.1 92109364 4025637 156659..157414 1 NC_007959.1 hypothetical protein 157414 4025637 Nham_4197 Nitrobacter hamburgensis X14 hypothetical protein YP_571652.1 156659 D 323097 CDS YP_571653.1 92109365 4025638 157592..159367 1 NC_007959.1 ABC transporter related 159367 4025638 Nham_4198 Nitrobacter hamburgensis X14 ABC transporter related YP_571653.1 157592 D 323097 CDS YP_571654.1 92109366 4025639 159389..159700 1 NC_007959.1 hypothetical protein 159700 4025639 Nham_4199 Nitrobacter hamburgensis X14 hypothetical protein YP_571654.1 159389 D 323097 CDS YP_571655.1 92109367 4025640 159663..160508 1 NC_007959.1 hypothetical protein 160508 4025640 Nham_4200 Nitrobacter hamburgensis X14 hypothetical protein YP_571655.1 159663 D 323097 CDS YP_571656.1 92109368 4025642 161763..161915 1 NC_007959.1 conjugal transfer TraD 161915 4025642 Nham_4202 Nitrobacter hamburgensis X14 conjugal transfer TraD YP_571656.1 161763 D 323097 CDS YP_571657.1 92109369 4025643 complement(162926..163258) 1 NC_007959.1 hypothetical protein 163258 4025643 Nham_4203 Nitrobacter hamburgensis X14 hypothetical protein YP_571657.1 162926 R 323097 CDS YP_571658.1 92109370 4025644 complement(163605..163802) 1 NC_007959.1 hypothetical protein 163802 4025644 Nham_4204 Nitrobacter hamburgensis X14 hypothetical protein YP_571658.1 163605 R 323097 CDS YP_571659.1 92109371 4025533 163937..164239 1 NC_007959.1 hypothetical protein 164239 4025533 Nham_4205 Nitrobacter hamburgensis X14 hypothetical protein YP_571659.1 163937 D 323097 CDS YP_571660.1 92109372 4025534 164866..165249 1 NC_007959.1 hypothetical protein 165249 4025534 Nham_4206 Nitrobacter hamburgensis X14 hypothetical protein YP_571660.1 164866 D 323097 CDS YP_571661.1 92109373 4025537 166276..168171 1 NC_007959.1 signal transduction histidine kinase 168171 4025537 Nham_4209 Nitrobacter hamburgensis X14 signal transduction histidine kinase YP_571661.1 166276 D 323097 CDS YP_571662.1 92109374 4025539 168526..168855 1 NC_007959.1 transposase IS3/IS911 168855 4025539 Nham_4211 Nitrobacter hamburgensis X14 transposase IS3/IS911 YP_571662.1 168526 D 323097 CDS YP_571663.1 92109375 4025540 168852..169757 1 NC_007959.1 integrase catalytic subunit 169757 4025540 Nham_4212 Nitrobacter hamburgensis X14 integrase catalytic subunit YP_571663.1 168852 D 323097 CDS YP_571664.1 92109376 4025541 170305..171327 1 NC_007959.1 DEAD/DEAH box helicase-like 171327 4025541 Nham_4213 Nitrobacter hamburgensis X14 DEAD/DEAH box helicase-like YP_571664.1 170305 D 323097 CDS YP_571665.1 92109377 4025542 171324..171569 1 NC_007959.1 hypothetical protein 171569 4025542 Nham_4214 Nitrobacter hamburgensis X14 hypothetical protein YP_571665.1 171324 D 323097 CDS YP_571666.1 92109378 4025543 complement(171874..172269) 1 NC_007959.1 transposase, IS4 172269 4025543 Nham_4215 Nitrobacter hamburgensis X14 transposase, IS4 YP_571666.1 171874 R 323097 CDS YP_571667.1 92109379 4025544 complement(172266..172634) 1 NC_007959.1 IS5 family transposase OrfA 172634 4025544 Nham_4216 Nitrobacter hamburgensis X14 IS5 family transposase OrfA YP_571667.1 172266 R 323097 CDS YP_571668.1 92109380 4025546 complement(173269..174231) 1 NC_007959.1 ErfK/YbiS/YcfS/YnhG 174231 4025546 Nham_4218 Nitrobacter hamburgensis X14 ErfK/YbiS/YcfS/YnhG YP_571668.1 173269 R 323097 CDS YP_571669.1 92109381 4025547 complement(174652..176631) 1 NC_007959.1 glycosyl transferase family protein 176631 4025547 Nham_4219 Nitrobacter hamburgensis X14 glycosyl transferase family protein YP_571669.1 174652 R 323097 CDS YP_571670.1 92109382 4025548 complement(176631..177800) 1 NC_007959.1 hypothetical protein 177800 4025548 Nham_4220 Nitrobacter hamburgensis X14 hypothetical protein YP_571670.1 176631 R 323097 CDS YP_571671.1 92109383 4025549 complement(177854..179128) 1 NC_007959.1 hypothetical protein 179128 4025549 Nham_4221 Nitrobacter hamburgensis X14 hypothetical protein YP_571671.1 177854 R 323097 CDS YP_571672.1 92109384 4025550 complement(179281..179568) 1 NC_007959.1 hypothetical protein 179568 4025550 Nham_4222 Nitrobacter hamburgensis X14 hypothetical protein YP_571672.1 179281 R 323097 CDS YP_571673.1 92109385 4025703 180959..181384 1 NC_007959.1 hypothetical protein 181384 4025703 Nham_4224 Nitrobacter hamburgensis X14 hypothetical protein YP_571673.1 180959 D 323097 CDS YP_571674.1 92109386 4025704 complement(181358..181597) 1 NC_007959.1 hypothetical protein 181597 4025704 Nham_4225 Nitrobacter hamburgensis X14 hypothetical protein YP_571674.1 181358 R 323097 CDS YP_571675.1 92109387 4025705 complement(181673..181966) 1 NC_007959.1 hypothetical protein 181966 4025705 Nham_4226 Nitrobacter hamburgensis X14 hypothetical protein YP_571675.1 181673 R 323097 CDS YP_571676.1 92109388 4025706 182076..182348 1 NC_007959.1 hypothetical protein 182348 4025706 Nham_4227 Nitrobacter hamburgensis X14 hypothetical protein YP_571676.1 182076 D 323097 CDS YP_571677.1 92109389 4025707 182551..183174 1 NC_007959.1 hypothetical protein 183174 4025707 Nham_4228 Nitrobacter hamburgensis X14 hypothetical protein YP_571677.1 182551 D 323097 CDS YP_571678.1 92109390 4025709 184583..184969 1 NC_007959.1 hypothetical protein 184969 4025709 Nham_4230 Nitrobacter hamburgensis X14 hypothetical protein YP_571678.1 184583 D 323097 CDS YP_571679.1 92109391 4025711 186158..186760 1 NC_007959.1 cupin 2, barrel 186760 4025711 Nham_4232 Nitrobacter hamburgensis X14 cupin 2, barrel YP_571679.1 186158 D 323097 CDS YP_571680.1 92109392 4025712 186757..187104 1 NC_007959.1 hypothetical protein 187104 4025712 Nham_4233 Nitrobacter hamburgensis X14 hypothetical protein YP_571680.1 186757 D 323097 CDS YP_571681.1 92109393 4025713 187101..187535 1 NC_007959.1 hypothetical protein 187535 4025713 Nham_4234 Nitrobacter hamburgensis X14 hypothetical protein YP_571681.1 187101 D 323097 CDS YP_571682.1 92109394 4025714 complement(187560..188663) 1 NC_007959.1 transposase 188663 4025714 Nham_4235 Nitrobacter hamburgensis X14 transposase YP_571682.1 187560 R 323097 CDS YP_571683.1 92109395 4025715 188867..189268 1 NC_007959.1 hypothetical protein 189268 4025715 Nham_4236 Nitrobacter hamburgensis X14 hypothetical protein YP_571683.1 188867 D 323097 CDS YP_571684.1 92109396 4025716 189336..189917 1 NC_007959.1 hypothetical protein 189917 4025716 Nham_4237 Nitrobacter hamburgensis X14 hypothetical protein YP_571684.1 189336 D 323097 CDS YP_571685.1 92109397 4025719 191453..191764 1 NC_007959.1 hypothetical protein 191764 4025719 Nham_4240 Nitrobacter hamburgensis X14 hypothetical protein YP_571685.1 191453 D 323097 CDS YP_571686.1 92109398 4025720 191874..192944 1 NC_007959.1 transposase 192944 4025720 Nham_4241 Nitrobacter hamburgensis X14 transposase YP_571686.1 191874 D 323097 CDS YP_571687.1 92109399 4025721 193016..193624 1 NC_007959.1 hypothetical protein 193624 4025721 Nham_4242 Nitrobacter hamburgensis X14 hypothetical protein YP_571687.1 193016 D 323097 CDS YP_571688.1 92109400 4025722 193901..194659 1 NC_007959.1 twin-arginine translocation pathway signal 194659 4025722 Nham_4243 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_571688.1 193901 D 323097 CDS YP_571689.1 92109401 4025743 194641..196407 1 NC_007959.1 gluconate dehydrogenase 196407 4025743 Nham_4244 Nitrobacter hamburgensis X14 gluconate dehydrogenase YP_571689.1 194641 D 323097 CDS YP_571690.1 92109402 4025744 196517..197692 1 NC_007959.1 cytochrome c, class I 197692 4025744 Nham_4245 Nitrobacter hamburgensis X14 cytochrome c, class I YP_571690.1 196517 D 323097 CDS YP_571691.1 92109403 4025745 198230..198487 1 NC_007959.1 hypothetical protein 198487 4025745 Nham_4246 Nitrobacter hamburgensis X14 hypothetical protein YP_571691.1 198230 D 323097 CDS YP_571692.1 92109404 4025746 198595..199074 1 NC_007959.1 transposase, IS111A/IS1328/IS1533 199074 4025746 Nham_4247 Nitrobacter hamburgensis X14 transposase, IS111A/IS1328/IS1533 YP_571692.1 198595 D 323097 CDS YP_571693.1 92109405 4025750 202172..202525 1 NC_007959.1 hypothetical protein 202525 4025750 Nham_4251 Nitrobacter hamburgensis X14 hypothetical protein YP_571693.1 202172 D 323097 CDS YP_571694.1 92109406 4025751 202546..202869 1 NC_007959.1 hypothetical protein 202869 4025751 Nham_4252 Nitrobacter hamburgensis X14 hypothetical protein YP_571694.1 202546 D 323097 CDS YP_571695.1 92109407 4025753 203950..204327 1 NC_007959.1 PRC-barrel 204327 4025753 Nham_4254 Nitrobacter hamburgensis X14 PRC-barrel YP_571695.1 203950 D 323097 CDS YP_571696.1 92109408 4025755 complement(205920..206174) 1 NC_007959.1 hypothetical protein 206174 4025755 Nham_4256 Nitrobacter hamburgensis X14 hypothetical protein YP_571696.1 205920 R 323097 CDS YP_571697.1 92109409 4025756 complement(206676..206966) 1 NC_007959.1 hypothetical protein 206966 4025756 Nham_4257 Nitrobacter hamburgensis X14 hypothetical protein YP_571697.1 206676 R 323097 CDS YP_571698.1 92109410 4025191 207381..207599 1 NC_007959.1 hypothetical protein 207599 4025191 Nham_4259 Nitrobacter hamburgensis X14 hypothetical protein YP_571698.1 207381 D 323097 CDS YP_571699.1 92109411 4025193 208201..209250 1 NC_007959.1 transposase, IS4 209250 4025193 Nham_4261 Nitrobacter hamburgensis X14 transposase, IS4 YP_571699.1 208201 D 323097 CDS YP_571700.1 92109412 4025194 209813..210907 1 NC_007959.1 tISRso5; ISRSO5-transposase protein 210907 4025194 Nham_4262 Nitrobacter hamburgensis X14 tISRso5; ISRSO5-transposase protein YP_571700.1 209813 D 323097 CDS YP_571701.1 92109413 4025195 211021..211476 1 NC_007959.1 hypothetical protein 211476 4025195 Nham_4263 Nitrobacter hamburgensis X14 hypothetical protein YP_571701.1 211021 D 323097 CDS YP_571702.1 92109414 4025196 complement(211504..212259) 1 NC_007959.1 transposase, IS4 212259 4025196 Nham_4264 Nitrobacter hamburgensis X14 transposase, IS4 YP_571702.1 211504 R 323097 CDS YP_571703.1 92109415 4025197 213892..214401 1 NC_007959.1 antirestriction protein 214401 4025197 Nham_4265 Nitrobacter hamburgensis X14 antirestriction protein YP_571703.1 213892 D 323097 CDS YP_571704.1 92109416 4025198 complement(214722..215150) 1 NC_007959.1 hypothetical protein 215150 4025198 Nham_4266 Nitrobacter hamburgensis X14 hypothetical protein YP_571704.1 214722 R 323097 CDS YP_571705.1 92109417 4025199 215578..215997 1 NC_007959.1 hypothetical protein 215997 4025199 Nham_4267 Nitrobacter hamburgensis X14 hypothetical protein YP_571705.1 215578 D 323097 CDS YP_571706.1 92109418 4025200 217327..218319 1 NC_007959.1 transposase, IS4 218319 4025200 Nham_4268 Nitrobacter hamburgensis X14 transposase, IS4 YP_571706.1 217327 D 323097 CDS YP_571707.1 92109419 4025201 complement(218529..220859) 1 NC_007959.1 hypothetical protein 220859 4025201 Nham_4269 Nitrobacter hamburgensis X14 hypothetical protein YP_571707.1 218529 R 323097 CDS YP_571708.1 92109420 4025202 complement(220856..221284) 1 NC_007959.1 hypothetical protein 221284 4025202 Nham_4270 Nitrobacter hamburgensis X14 hypothetical protein YP_571708.1 220856 R 323097 CDS YP_571709.1 92109421 4025203 221881..222570 1 NC_007959.1 cobyrinic acid a,c-diamide synthase 222570 4025203 Nham_4271 Nitrobacter hamburgensis X14 cobyrinic acid a,c-diamide synthase YP_571709.1 221881 D 323097 CDS YP_571710.1 92109422 4025204 222567..222980 1 NC_007959.1 hypothetical protein 222980 4025204 Nham_4272 Nitrobacter hamburgensis X14 hypothetical protein YP_571710.1 222567 D 323097 CDS YP_571711.1 92109423 4025205 complement(223271..224455) 1 NC_007959.1 esterase, PHB depolymerase 224455 4025205 Nham_4273 Nitrobacter hamburgensis X14 esterase, PHB depolymerase YP_571711.1 223271 R 323097 CDS YP_571712.1 92109424 4025206 complement(224460..224900) 1 NC_007959.1 CopG family transcriptional regulator 224900 4025206 Nham_4274 Nitrobacter hamburgensis X14 CopG family transcriptional regulator YP_571712.1 224460 R 323097 CDS YP_571713.1 92109425 4025207 224914..225297 1 NC_007959.1 hypothetical protein 225297 4025207 Nham_4275 Nitrobacter hamburgensis X14 hypothetical protein YP_571713.1 224914 D 323097 CDS YP_571714.1 92109426 4025209 225726..226097 1 NC_007959.1 transcriptional regulator 226097 4025209 Nham_4277 Nitrobacter hamburgensis X14 transcriptional regulator YP_571714.1 225726 D 323097 CDS YP_571715.1 92109427 4025210 complement(226174..226902) 1 NC_007959.1 single-strand binding protein/primosomal replication protein n 226902 4025210 Nham_4278 Nitrobacter hamburgensis X14 single-strand binding protein/primosomal replication protein n YP_571715.1 226174 R 323097 CDS YP_571716.1 92109428 4025211 complement(227124..228356) 1 NC_007959.1 replication initiation protein RepC 228356 4025211 Nham_4279 Nitrobacter hamburgensis X14 replication initiation protein RepC YP_571716.1 227124 R 323097 CDS YP_571717.1 92109429 4025212 complement(228625..229626) 1 NC_007959.1 RepB plasmid partition 229626 4025212 Nham_4280 Nitrobacter hamburgensis X14 RepB plasmid partition YP_571717.1 228625 R 323097 CDS YP_571718.1 92109430 4025213 complement(229626..230849) 1 NC_007959.1 cobyrinic acid a,c-diamide synthase 230849 4025213 Nham_4281 Nitrobacter hamburgensis X14 cobyrinic acid a,c-diamide synthase YP_571718.1 229626 R 323097 CDS YP_571719.1 92109431 4025664 complement(232256..232579) 1 NC_007959.1 hypothetical protein 232579 4025664 Nham_4283 Nitrobacter hamburgensis X14 hypothetical protein YP_571719.1 232256 R 323097 CDS YP_571720.1 92109432 4025665 complement(232652..233089) 1 NC_007959.1 prevent-host-death protein 233089 4025665 Nham_4284 Nitrobacter hamburgensis X14 prevent-host-death protein YP_571720.1 232652 R 323097 CDS YP_571721.1 92109433 4025666 complement(233086..233364) 1 NC_007959.1 hypothetical protein 233364 4025666 Nham_4285 Nitrobacter hamburgensis X14 hypothetical protein YP_571721.1 233086 R 323097 CDS YP_571722.1 92109434 4025667 complement(233422..233661) 1 NC_007959.1 hypothetical protein 233661 4025667 Nham_4286 Nitrobacter hamburgensis X14 hypothetical protein YP_571722.1 233422 R 323097 CDS YP_571723.1 92109435 4025668 complement(233663..234985) 1 NC_007959.1 TniB 234985 4025668 Nham_4287 Nitrobacter hamburgensis X14 TniB YP_571723.1 233663 R 323097 CDS YP_571724.1 92109436 4025669 complement(234966..236609) 1 NC_007959.1 integrase catalytic subunit 236609 4025669 Nham_4288 Nitrobacter hamburgensis X14 integrase catalytic subunit YP_571724.1 234966 R 323097 CDS YP_571725.1 92109437 4025670 236720..237670 1 NC_007959.1 hypothetical protein 237670 4025670 Nham_4289 Nitrobacter hamburgensis X14 hypothetical protein YP_571725.1 236720 D 323097 CDS YP_571726.1 92109438 4025672 238963..239832 1 NC_007959.1 hypothetical protein 239832 4025672 Nham_4291 Nitrobacter hamburgensis X14 hypothetical protein YP_571726.1 238963 D 323097 CDS YP_571727.1 92109439 4025673 239874..240908 1 NC_007959.1 hypothetical protein 240908 4025673 Nham_4292 Nitrobacter hamburgensis X14 hypothetical protein YP_571727.1 239874 D 323097 CDS YP_571728.1 92109440 4025674 241063..241830 1 NC_007959.1 hypothetical protein 241830 4025674 Nham_4293 Nitrobacter hamburgensis X14 hypothetical protein YP_571728.1 241063 D 323097 CDS YP_571729.1 92109441 4025677 242723..243958 1 NC_007959.1 transposase IS116/IS110/IS902 243958 4025677 Nham_4296 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_571729.1 242723 D 323097 CDS YP_571730.1 92109442 4025678 complement(243977..245107) 1 NC_007959.1 transposase, mutator type 245107 4025678 Nham_4297 Nitrobacter hamburgensis X14 transposase, mutator type YP_571730.1 243977 R 323097 CDS YP_571731.1 92109443 4025679 245449..245697 1 NC_007959.1 hypothetical protein 245697 4025679 Nham_4298 Nitrobacter hamburgensis X14 hypothetical protein YP_571731.1 245449 D 323097 CDS YP_571732.1 92109444 4025680 247723..248316 1 NC_007959.1 transposase 248316 4025680 Nham_4299 Nitrobacter hamburgensis X14 transposase YP_571732.1 247723 D 323097 CDS YP_571733.1 92109445 4025681 249385..249780 1 NC_007959.1 hypothetical protein 249780 4025681 Nham_4300 Nitrobacter hamburgensis X14 hypothetical protein YP_571733.1 249385 D 323097 CDS YP_571734.1 92109446 4025682 249773..250108 1 NC_007959.1 alkylhydroperoxidase AhpD core 250108 4025682 Nham_4301 Nitrobacter hamburgensis X14 alkylhydroperoxidase AhpD core YP_571734.1 249773 D 323097 CDS YP_571735.1 92109447 4025684 complement(250545..251198) 1 NC_007959.1 oxidoreductase FAD/NAD(P)-binding 251198 4025684 Nham_4303 Nitrobacter hamburgensis X14 oxidoreductase FAD/NAD(P)-binding YP_571735.1 250545 R 323097 CDS YP_571736.1 92109448 4025686 251616..252239 1 NC_007959.1 conjugal transfer protein TraH 252239 4025686 Nham_4305 Nitrobacter hamburgensis X14 conjugal transfer protein TraH YP_571736.1 251616 D 323097 CDS YP_571737.1 92109449 4025687 252276..252863 1 NC_007959.1 hypothetical protein 252863 4025687 Nham_4306 Nitrobacter hamburgensis X14 hypothetical protein YP_571737.1 252276 D 323097 CDS YP_571738.1 92109450 4025688 253941..254660 1 NC_007959.1 hypothetical protein 254660 4025688 Nham_4307 Nitrobacter hamburgensis X14 hypothetical protein YP_571738.1 253941 D 323097 CDS YP_571739.1 92109451 4025689 254657..255172 1 NC_007959.1 hypothetical protein 255172 4025689 Nham_4308 Nitrobacter hamburgensis X14 hypothetical protein YP_571739.1 254657 D 323097 CDS YP_571740.1 92109452 4025690 complement(255175..255555) 1 NC_007959.1 hypothetical protein 255555 4025690 Nham_4309 Nitrobacter hamburgensis X14 hypothetical protein YP_571740.1 255175 R 323097 CDS YP_571741.1 92109453 4025691 complement(255664..256164) 1 NC_007959.1 heat shock protein Hsp20 256164 4025691 Nham_4310 Nitrobacter hamburgensis X14 heat shock protein Hsp20 YP_571741.1 255664 R 323097 CDS YP_571742.1 92109454 4025692 complement(256250..256711) 1 NC_007959.1 heat shock protein Hsp20 256711 4025692 Nham_4311 Nitrobacter hamburgensis X14 heat shock protein Hsp20 YP_571742.1 256250 R 323097 CDS YP_571743.1 92109455 4025693 complement(257283..257711) 1 NC_007959.1 PilT protein-like 257711 4025693 Nham_4312 Nitrobacter hamburgensis X14 PilT protein-like YP_571743.1 257283 R 323097 CDS YP_571744.1 92109456 4025694 complement(257708..257962) 1 NC_007959.1 hypothetical protein 257962 4025694 Nham_4313 Nitrobacter hamburgensis X14 hypothetical protein YP_571744.1 257708 R 323097 CDS YP_571745.1 92109457 4025695 258081..258587 1 NC_007959.1 hypothetical protein 258587 4025695 Nham_4314 Nitrobacter hamburgensis X14 hypothetical protein YP_571745.1 258081 D 323097 CDS YP_571746.1 92109458 4025696 complement(258709..259944) 1 NC_007959.1 transposase IS116/IS110/IS902 259944 4025696 Nham_4315 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_571746.1 258709 R 323097 CDS YP_571747.1 92109459 4025698 261465..261704 1 NC_007959.1 hypothetical protein 261704 4025698 Nham_4317 Nitrobacter hamburgensis X14 hypothetical protein YP_571747.1 261465 D 323097 CDS YP_571748.1 92109460 4025699 261831..262079 1 NC_007959.1 hypothetical protein 262079 4025699 Nham_4318 Nitrobacter hamburgensis X14 hypothetical protein YP_571748.1 261831 D 323097 CDS YP_571749.1 92109461 4025701 complement(262796..263089) 1 NC_007959.1 hypothetical protein 263089 4025701 Nham_4320 Nitrobacter hamburgensis X14 hypothetical protein YP_571749.1 262796 R 323097 CDS YP_571750.1 92109462 4025702 263298..264995 1 NC_007959.1 NADH/ubiquinone/plastoquinone (complex I) 264995 4025702 Nham_4321 Nitrobacter hamburgensis X14 NADH/ubiquinone/plastoquinone (complex I) YP_571750.1 263298 D 323097 CDS YP_571751.1 92109463 4025645 265002..265763 1 NC_007959.1 hypothetical protein 265763 4025645 Nham_4322 Nitrobacter hamburgensis X14 hypothetical protein YP_571751.1 265002 D 323097 CDS YP_571752.1 92109464 4025646 265742..268861 1 NC_007959.1 hypothetical protein 268861 4025646 Nham_4323 Nitrobacter hamburgensis X14 hypothetical protein YP_571752.1 265742 D 323097 CDS YP_571753.1 92109465 4025647 268858..269184 1 NC_007959.1 nitrogen regulatory protein P-II (GlnB, GlnK) 269184 4025647 Nham_4324 Nitrobacter hamburgensis X14 nitrogen regulatory protein P-II (GlnB, GlnK) YP_571753.1 268858 D 323097 CDS YP_571754.1 92109466 4025650 270217..271914 1 NC_007959.1 NADH/ubiquinone/plastoquinone (complex I) 271914 4025650 Nham_4327 Nitrobacter hamburgensis X14 NADH/ubiquinone/plastoquinone (complex I) YP_571754.1 270217 D 323097 CDS YP_571755.1 92109467 4025651 271921..272682 1 NC_007959.1 hypothetical protein 272682 4025651 Nham_4328 Nitrobacter hamburgensis X14 hypothetical protein YP_571755.1 271921 D 323097 CDS YP_571756.1 92109468 4025652 272661..275780 1 NC_007959.1 hypothetical protein 275780 4025652 Nham_4329 Nitrobacter hamburgensis X14 hypothetical protein YP_571756.1 272661 D 323097 CDS YP_571757.1 92109469 4025653 275777..276103 1 NC_007959.1 nitrogen regulatory protein P-II (GlnB, GlnK) 276103 4025653 Nham_4330 Nitrobacter hamburgensis X14 nitrogen regulatory protein P-II (GlnB, GlnK) YP_571757.1 275777 D 323097 CDS YP_571758.1 92109470 4025654 complement(276093..277025) 1 NC_007959.1 LysR family transcriptional regulator 277025 4025654 Nham_4331 Nitrobacter hamburgensis X14 LysR family transcriptional regulator YP_571758.1 276093 R 323097 CDS YP_571759.1 92109471 4025655 277237..278658 1 NC_007959.1 type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase 278658 rbcL 4025655 rbcL Nitrobacter hamburgensis X14 ribulose bisophosphate carboxylase YP_571759.1 277237 D 323097 CDS YP_571760.1 92109472 4025656 278735..279061 1 NC_007959.1 ribulose bisphosphate carboxylase, small chain 279061 4025656 Nham_4333 Nitrobacter hamburgensis X14 ribulose bisphosphate carboxylase, small chain YP_571760.1 278735 D 323097 CDS YP_571761.1 92109473 4025657 279166..281841 1 NC_007959.1 carboxysome shell protein CsoS2 281841 4025657 Nham_4334 Nitrobacter hamburgensis X14 carboxysome shell protein CsoS2 YP_571761.1 279166 D 323097 CDS YP_571762.1 92109474 4025658 281853..283385 1 NC_007959.1 carboxysome shell polypeptide, CsoS3 283385 4025658 Nham_4335 Nitrobacter hamburgensis X14 carboxysome shell polypeptide, CsoS3 YP_571762.1 281853 D 323097 CDS YP_571763.1 92109475 4025659 283399..283656 1 NC_007959.1 ethanolamine utilization protein EutN/carboxysome structural protein Ccml 283656 4025659 Nham_4336 Nitrobacter hamburgensis X14 ethanolamine utilization protein EutN/carboxysome structural protein Ccml YP_571763.1 283399 D 323097 CDS YP_571764.1 92109476 4025660 283656..283904 1 NC_007959.1 microcompartments protein 283904 4025660 Nham_4337 Nitrobacter hamburgensis X14 microcompartments protein YP_571764.1 283656 D 323097 CDS YP_571765.1 92109477 4025661 284006..284305 1 NC_007959.1 carboxysome structural polypeptide 284305 4025661 Nham_4338 Nitrobacter hamburgensis X14 carboxysome structural polypeptide YP_571765.1 284006 D 323097 CDS YP_571766.1 92109478 4025662 284348..284695 1 NC_007959.1 carboxysome structural peptide CsoS1B 284695 4025662 Nham_4339 Nitrobacter hamburgensis X14 carboxysome structural peptide CsoS1B YP_571766.1 284348 D 323097 CDS YP_571767.1 92109479 4025571 285116..285382 1 NC_007959.1 hypothetical protein 285382 4025571 Nham_4341 Nitrobacter hamburgensis X14 hypothetical protein YP_571767.1 285116 D 323097 CDS YP_571768.1 92109480 4025572 285386..286021 1 NC_007959.1 cobyrinic acid a,c-diamide synthase 286021 4025572 Nham_4342 Nitrobacter hamburgensis X14 cobyrinic acid a,c-diamide synthase YP_571768.1 285386 D 323097 CDS YP_571769.1 92109481 4025573 286018..286230 1 NC_007959.1 hypothetical protein 286230 4025573 Nham_4343 Nitrobacter hamburgensis X14 hypothetical protein YP_571769.1 286018 D 323097 CDS YP_571770.1 92109482 4025282 286337..287173 1 NC_007959.1 ATPase 287173 4025282 Nham_4344 Nitrobacter hamburgensis X14 ATPase YP_571770.1 286337 D 323097 CDS YP_571771.1 92109483 4025575 287217..289625 1 NC_007959.1 von Willebrand factor, type A 289625 4025575 Nham_4345 Nitrobacter hamburgensis X14 von Willebrand factor, type A YP_571771.1 287217 D 323097 CDS YP_571772.1 92109484 4025576 289639..290271 1 NC_007959.1 hypothetical protein 290271 4025576 Nham_4346 Nitrobacter hamburgensis X14 hypothetical protein YP_571772.1 289639 D 323097 CDS YP_571773.1 92109485 4025577 290277..291104 1 NC_007959.1 hypothetical protein 291104 4025577 Nham_4347 Nitrobacter hamburgensis X14 hypothetical protein YP_571773.1 290277 D 323097 CDS YP_571774.1 92109486 4025578 291118..291543 1 NC_007959.1 hypothetical protein 291543 4025578 Nham_4348 Nitrobacter hamburgensis X14 hypothetical protein YP_571774.1 291118 D 323097 CDS YP_571775.1 92109487 4025581 292236..292505 1 NC_007959.1 hypothetical protein 292505 4025581 Nham_4351 Nitrobacter hamburgensis X14 hypothetical protein YP_571775.1 292236 D 323097 CDS YP_571776.1 92109488 4025583 complement(293765..294475) 1 NC_007959.1 hypothetical protein 294475 4025583 Nham_4353 Nitrobacter hamburgensis X14 hypothetical protein YP_571776.1 293765 R 323097 CDS YP_571777.1 92109489 4025584 complement(294475..294825) 1 NC_007959.1 transposase IS3/IS911 294825 4025584 Nham_4354 Nitrobacter hamburgensis X14 transposase IS3/IS911 YP_571777.1 294475 R 323097 CDS YP_571778.1 92109491 4025215 44..628 1 NC_007960.1 hypothetical protein 628 4025215 Nham_4355 Nitrobacter hamburgensis X14 hypothetical protein YP_571778.1 44 D 323097 CDS YP_571779.1 92109492 4025216 1159..1515 1 NC_007960.1 hypothetical protein 1515 4025216 Nham_4356 Nitrobacter hamburgensis X14 hypothetical protein YP_571779.1 1159 D 323097 CDS YP_571780.1 92109493 4025217 1615..2022 1 NC_007960.1 hypothetical protein 2022 4025217 Nham_4357 Nitrobacter hamburgensis X14 hypothetical protein YP_571780.1 1615 D 323097 CDS YP_571781.1 92109494 4025218 2019..3437 1 NC_007960.1 secretion protein HlyD 3437 4025218 Nham_4358 Nitrobacter hamburgensis X14 secretion protein HlyD YP_571781.1 2019 D 323097 CDS YP_571782.1 92109495 4025219 3434..6616 1 NC_007960.1 heavy metal efflux pump CzcA 6616 4025219 Nham_4359 Nitrobacter hamburgensis X14 heavy metal efflux pump CzcA YP_571782.1 3434 D 323097 CDS YP_571783.1 92109496 4025220 6759..7466 1 NC_007960.1 cytochrome c, class I 7466 4025220 Nham_4360 Nitrobacter hamburgensis X14 cytochrome c, class I YP_571783.1 6759 D 323097 CDS YP_571784.1 92109497 4025221 7589..8146 1 NC_007960.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 8146 4025221 Nham_4361 Nitrobacter hamburgensis X14 RNA polymerase sigma factor YP_571784.1 7589 D 323097 CDS YP_571785.1 92109498 4025222 8369..8710 1 NC_007960.1 hypothetical protein 8710 4025222 Nham_4362 Nitrobacter hamburgensis X14 hypothetical protein YP_571785.1 8369 D 323097 CDS YP_571786.1 92109499 4025223 complement(8861..9547) 1 NC_007960.1 hypothetical protein 9547 4025223 Nham_4363 Nitrobacter hamburgensis X14 hypothetical protein YP_571786.1 8861 R 323097 CDS YP_571787.1 92109500 4025224 9583..12018 1 NC_007960.1 copper-translocating P-type ATPase 12018 4025224 Nham_4364 Nitrobacter hamburgensis X14 copper-translocating P-type ATPase YP_571787.1 9583 D 323097 CDS YP_571788.1 92109501 4025225 12054..13295 1 NC_007960.1 major facilitator transporter 13295 4025225 Nham_4365 Nitrobacter hamburgensis X14 major facilitator transporter YP_571788.1 12054 D 323097 CDS YP_571789.1 92109502 4025226 complement(13859..14338) 1 NC_007960.1 hypothetical protein 14338 4025226 Nham_4366 Nitrobacter hamburgensis X14 hypothetical protein YP_571789.1 13859 R 323097 CDS YP_571790.1 92109503 4025227 complement(14429..16810) 1 NC_007960.1 putative phosphoketolase 16810 4025227 Nham_4367 Nitrobacter hamburgensis X14 putative phosphoketolase YP_571790.1 14429 R 323097 CDS YP_571791.1 92109504 4025228 complement(17002..18123) 1 NC_007960.1 glycosidase, PH1107-related 18123 4025228 Nham_4368 Nitrobacter hamburgensis X14 glycosidase, PH1107-related YP_571791.1 17002 R 323097 CDS YP_571792.1 92109505 4025229 complement(18116..18892) 1 NC_007960.1 HAD family hydrolase 18892 4025229 Nham_4369 Nitrobacter hamburgensis X14 HAD family hydrolase YP_571792.1 18116 R 323097 CDS YP_571793.1 92109506 4025230 complement(18889..22155) 1 NC_007960.1 Beta-phosphoglucomutase hydrolase 22155 4025230 Nham_4370 Nitrobacter hamburgensis X14 Beta-phosphoglucomutase hydrolase YP_571793.1 18889 R 323097 CDS YP_571794.1 92109507 4025231 complement(22288..23238) 1 NC_007960.1 glucokinase 23238 4025231 Nham_4371 Nitrobacter hamburgensis X14 glucokinase YP_571794.1 22288 R 323097 CDS YP_571795.1 92109508 4025232 complement(23417..24655) 1 NC_007960.1 acetate kinase 24655 4025232 Nham_4372 Nitrobacter hamburgensis X14 acetate kinase YP_571795.1 23417 R 323097 CDS YP_571796.1 92109509 4025233 complement(24706..25170) 1 NC_007960.1 CBS domain-containing protein 25170 4025233 Nham_4373 Nitrobacter hamburgensis X14 CBS domain-containing protein YP_571796.1 24706 R 323097 CDS YP_571797.1 92109510 4025234 25600..25887 1 NC_007960.1 hypothetical protein 25887 4025234 Nham_4374 Nitrobacter hamburgensis X14 hypothetical protein YP_571797.1 25600 D 323097 CDS YP_571798.1 92109511 4025235 25981..26787 1 NC_007960.1 Crp/FNR family transcriptional regulator 26787 4025235 Nham_4375 Nitrobacter hamburgensis X14 Crp/FNR family transcriptional regulator YP_571798.1 25981 D 323097 CDS YP_571799.1 92109512 4025236 26781..27416 1 NC_007960.1 hypothetical protein 27416 4025236 Nham_4376 Nitrobacter hamburgensis X14 hypothetical protein YP_571799.1 26781 D 323097 CDS YP_571800.1 92109513 4025237 27655..30093 1 NC_007960.1 magnesium-translocating P-type ATPase 30093 4025237 Nham_4377 Nitrobacter hamburgensis X14 magnesium-translocating P-type ATPase YP_571800.1 27655 D 323097 CDS YP_571801.1 92109514 4025238 complement(30520..31326) 1 NC_007960.1 purine phosphorylases family protein 1 31326 4025238 Nham_4378 Nitrobacter hamburgensis X14 purine phosphorylases family protein 1 YP_571801.1 30520 R 323097 CDS YP_571802.1 92109515 4025239 31364..31984 1 NC_007960.1 hypothetical protein 31984 4025239 Nham_4379 Nitrobacter hamburgensis X14 hypothetical protein YP_571802.1 31364 D 323097 CDS YP_571803.1 92109516 4025240 complement(32047..34503) 1 NC_007960.1 copper-translocating P-type ATPase 34503 4025240 Nham_4380 Nitrobacter hamburgensis X14 copper-translocating P-type ATPase YP_571803.1 32047 R 323097 CDS YP_571804.1 92109517 4025241 34557..34832 1 NC_007960.1 hypothetical protein 34832 4025241 Nham_4381 Nitrobacter hamburgensis X14 hypothetical protein YP_571804.1 34557 D 323097 CDS YP_571805.1 92109518 4025242 34919..35395 1 NC_007960.1 hypothetical protein 35395 4025242 Nham_4382 Nitrobacter hamburgensis X14 hypothetical protein YP_571805.1 34919 D 323097 CDS YP_571806.1 92109519 4025243 35416..35775 1 NC_007960.1 hypothetical protein 35775 4025243 Nham_4383 Nitrobacter hamburgensis X14 hypothetical protein YP_571806.1 35416 D 323097 CDS YP_571807.1 92109520 4025244 35785..37242 1 NC_007960.1 outer membrane efflux protein 37242 4025244 Nham_4384 Nitrobacter hamburgensis X14 outer membrane efflux protein YP_571807.1 35785 D 323097 CDS YP_571808.1 92109521 4025245 37254..38633 1 NC_007960.1 twin-arginine translocation pathway signal 38633 4025245 Nham_4385 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_571808.1 37254 D 323097 CDS YP_571809.1 92109522 4025247 39069..39689 1 NC_007960.1 cytochrome c family protein 39689 4025247 Nham_4387 Nitrobacter hamburgensis X14 cytochrome c family protein YP_571809.1 39069 D 323097 CDS YP_571810.1 92109523 4025249 40454..40774 1 NC_007960.1 hypothetical protein 40774 4025249 Nham_4389 Nitrobacter hamburgensis X14 hypothetical protein YP_571810.1 40454 D 323097 CDS YP_571811.1 92109524 4025253 complement(42574..43149) 1 NC_007960.1 hypothetical protein 43149 4025253 Nham_4393 Nitrobacter hamburgensis X14 hypothetical protein YP_571811.1 42574 R 323097 CDS YP_571812.1 92109525 4025254 43286..43636 1 NC_007960.1 IstB 43636 4025254 Nham_4394 Nitrobacter hamburgensis X14 IstB YP_571812.1 43286 D 323097 CDS YP_571813.1 92109526 4025255 complement(43656..45509) 1 NC_007960.1 resolvase-like protein 45509 4025255 Nham_4395 Nitrobacter hamburgensis X14 resolvase-like protein YP_571813.1 43656 R 323097 CDS YP_571814.1 92109527 4025256 complement(45704..46390) 1 NC_007960.1 LuxR family transcriptional regulator 46390 4025256 Nham_4396 Nitrobacter hamburgensis X14 LuxR family transcriptional regulator YP_571814.1 45704 R 323097 CDS YP_571815.1 92109528 4025257 complement(47118..48077) 1 NC_007960.1 copper resistance D 48077 4025257 Nham_4397 Nitrobacter hamburgensis X14 copper resistance D YP_571815.1 47118 R 323097 CDS YP_571816.1 92109529 4025258 complement(48092..48448) 1 NC_007960.1 copper resistance protein CopC 48448 4025258 Nham_4398 Nitrobacter hamburgensis X14 copper resistance protein CopC YP_571816.1 48092 R 323097 CDS YP_571817.1 92109530 4025259 complement(48451..49455) 1 NC_007960.1 hypothetical protein 49455 4025259 Nham_4399 Nitrobacter hamburgensis X14 hypothetical protein YP_571817.1 48451 R 323097 CDS YP_571818.1 92109531 4025260 complement(49533..49976) 1 NC_007960.1 hypothetical protein 49976 4025260 Nham_4400 Nitrobacter hamburgensis X14 hypothetical protein YP_571818.1 49533 R 323097 CDS YP_571819.1 92109532 4025263 complement(50713..51111) 1 NC_007960.1 hypothetical protein 51111 4025263 Nham_4403 Nitrobacter hamburgensis X14 hypothetical protein YP_571819.1 50713 R 323097 CDS YP_571820.1 92109533 4025264 complement(51243..54440) 1 NC_007960.1 heavy metal efflux pump CzcA 54440 4025264 Nham_4404 Nitrobacter hamburgensis X14 heavy metal efflux pump CzcA YP_571820.1 51243 R 323097 CDS YP_571821.1 92109534 4025265 complement(54437..56089) 1 NC_007960.1 secretion protein HlyD 56089 4025265 Nham_4405 Nitrobacter hamburgensis X14 secretion protein HlyD YP_571821.1 54437 R 323097 CDS YP_571822.1 92109535 4025266 complement(56331..56600) 1 NC_007960.1 hypothetical protein 56600 4025266 Nham_4406 Nitrobacter hamburgensis X14 hypothetical protein YP_571822.1 56331 R 323097 CDS YP_571823.1 92109536 4025267 complement(56966..57607) 1 NC_007960.1 hypothetical protein 57607 4025267 Nham_4407 Nitrobacter hamburgensis X14 hypothetical protein YP_571823.1 56966 R 323097 CDS YP_571824.1 92109537 4025268 complement(57604..58158) 1 NC_007960.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 58158 4025268 Nham_4408 Nitrobacter hamburgensis X14 RNA polymerase sigma factor YP_571824.1 57604 R 323097 CDS YP_571825.1 92109538 4025269 58439..58681 1 NC_007960.1 hypothetical protein 58681 4025269 Nham_4409 Nitrobacter hamburgensis X14 hypothetical protein YP_571825.1 58439 D 323097 CDS YP_571826.1 92109539 4025270 complement(59184..60467) 1 NC_007960.1 hypothetical protein 60467 4025270 Nham_4410 Nitrobacter hamburgensis X14 hypothetical protein YP_571826.1 59184 R 323097 CDS YP_571827.1 92109540 4025271 complement(60539..60916) 1 NC_007960.1 hypothetical protein 60916 4025271 Nham_4411 Nitrobacter hamburgensis X14 hypothetical protein YP_571827.1 60539 R 323097 CDS YP_571828.1 92109541 4025272 complement(61175..61429) 1 NC_007960.1 hypothetical protein 61429 4025272 Nham_4412 Nitrobacter hamburgensis X14 hypothetical protein YP_571828.1 61175 R 323097 CDS YP_571829.1 92109542 4025273 61457..62107 1 NC_007960.1 hypothetical protein 62107 4025273 Nham_4413 Nitrobacter hamburgensis X14 hypothetical protein YP_571829.1 61457 D 323097 CDS YP_571830.1 92109543 4025274 62216..62539 1 NC_007960.1 hypothetical protein 62539 4025274 Nham_4414 Nitrobacter hamburgensis X14 hypothetical protein YP_571830.1 62216 D 323097 CDS YP_571831.1 92109544 4025275 complement(62766..64145) 1 NC_007960.1 hypothetical protein 64145 4025275 Nham_4415 Nitrobacter hamburgensis X14 hypothetical protein YP_571831.1 62766 R 323097 CDS YP_571832.1 92109545 4025276 complement(64478..64816) 1 NC_007960.1 hypothetical protein 64816 4025276 Nham_4416 Nitrobacter hamburgensis X14 hypothetical protein YP_571832.1 64478 R 323097 CDS YP_571833.1 92109546 4025277 complement(64853..65137) 1 NC_007960.1 mercuric transport protein periplasmic protein 65137 4025277 Nham_4417 Nitrobacter hamburgensis X14 mercuric transport protein periplasmic protein YP_571833.1 64853 R 323097 CDS YP_571834.1 92109547 4025278 complement(65149..65526) 1 NC_007960.1 mercuric ion transport protein, MerT 65526 4025278 Nham_4418 Nitrobacter hamburgensis X14 mercuric ion transport protein, MerT YP_571834.1 65149 R 323097 CDS YP_571835.1 92109548 4025279 complement(65539..66237) 1 NC_007960.1 cytochrome c biogenesis protein, transmembrane region 66237 4025279 Nham_4419 Nitrobacter hamburgensis X14 cytochrome c biogenesis protein, transmembrane region YP_571835.1 65539 R 323097 CDS YP_571836.1 92109549 4025280 complement(66234..66494) 1 NC_007960.1 thioredoxin/glutaredoxin 66494 4025280 Nham_4420 Nitrobacter hamburgensis X14 thioredoxin/glutaredoxin YP_571836.1 66234 R 323097 CDS YP_571837.1 92109550 4025281 complement(66498..66917) 1 NC_007960.1 MerR family transcriptional regulator 66917 4025281 Nham_4421 Nitrobacter hamburgensis X14 MerR family transcriptional regulator YP_571837.1 66498 R 323097 CDS YP_571838.1 92109551 4025525 complement(67035..68267) 1 NC_007960.1 major facilitator transporter 68267 4025525 Nham_4422 Nitrobacter hamburgensis X14 major facilitator transporter YP_571838.1 67035 R 323097 CDS YP_571839.1 92109552 4025434 complement(68287..70740) 1 NC_007960.1 heavy metal translocating P-type ATPase 70740 4025434 Nham_4423 Nitrobacter hamburgensis X14 heavy metal translocating P-type ATPase YP_571839.1 68287 R 323097 CDS YP_571840.1 92109553 4025435 complement(70806..71021) 1 NC_007960.1 heavy metal transport/detoxification protein 71021 4025435 Nham_4424 Nitrobacter hamburgensis X14 heavy metal transport/detoxification protein YP_571840.1 70806 R 323097 CDS YP_571841.1 92109554 4025436 complement(71270..71737) 1 NC_007960.1 ArsR family transcriptional regulator 71737 4025436 Nham_4425 Nitrobacter hamburgensis X14 ArsR family transcriptional regulator YP_571841.1 71270 R 323097 CDS YP_571842.1 92109555 4025437 71968..72489 1 NC_007960.1 twin-arginine translocation pathway signal 72489 4025437 Nham_4426 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_571842.1 71968 D 323097 CDS YP_571843.1 92109556 4025438 72502..74964 1 NC_007960.1 arsenate reductase (azurin) 74964 4025438 Nham_4427 Nitrobacter hamburgensis X14 arsenate reductase (azurin) YP_571843.1 72502 D 323097 CDS YP_571844.1 92109557 4025439 complement(75160..75882) 1 NC_007960.1 NADPH-dependent FMN reductase 75882 4025439 Nham_4428 Nitrobacter hamburgensis X14 NADPH-dependent FMN reductase YP_571844.1 75160 R 323097 CDS YP_571845.1 92109558 4025440 complement(75872..76276) 1 NC_007960.1 arsenate reductase 76276 4025440 Nham_4429 Nitrobacter hamburgensis X14 arsenate reductase YP_571845.1 75872 R 323097 CDS YP_571846.1 92109559 4025441 complement(76273..76971) 1 NC_007960.1 major intrinsic protein 76971 4025441 Nham_4430 Nitrobacter hamburgensis X14 major intrinsic protein YP_571846.1 76273 R 323097 CDS YP_571847.1 92109560 4025442 complement(76971..77846) 1 NC_007960.1 ArsR family transcriptional regulator 77846 4025442 Nham_4431 Nitrobacter hamburgensis X14 ArsR family transcriptional regulator YP_571847.1 76971 R 323097 CDS YP_571848.1 92109561 4025443 77954..78271 1 NC_007960.1 ArsR family transcriptional regulator 78271 4025443 Nham_4432 Nitrobacter hamburgensis X14 ArsR family transcriptional regulator YP_571848.1 77954 D 323097 CDS YP_571849.1 92109562 4025444 78321..79691 1 NC_007960.1 putative secreted protein 79691 4025444 Nham_4433 Nitrobacter hamburgensis X14 putative secreted protein YP_571849.1 78321 D 323097 CDS YP_571850.1 92109563 4025445 79702..80883 1 NC_007960.1 major facilitator transporter 80883 4025445 Nham_4434 Nitrobacter hamburgensis X14 major facilitator transporter YP_571850.1 79702 D 323097 CDS YP_571851.1 92109564 4025446 complement(81125..81820) 1 NC_007960.1 LuxR family transcriptional regulator 81820 4025446 Nham_4435 Nitrobacter hamburgensis X14 LuxR family transcriptional regulator YP_571851.1 81125 R 323097 CDS YP_571852.1 92109565 4025447 complement(82387..84531) 1 NC_007960.1 TRAG protein 84531 4025447 Nham_4436 Nitrobacter hamburgensis X14 TRAG protein YP_571852.1 82387 R 323097 CDS YP_571853.1 92109566 4025448 complement(84509..85558) 1 NC_007960.1 type II secretion system protein E 85558 4025448 Nham_4437 Nitrobacter hamburgensis X14 type II secretion system protein E YP_571853.1 84509 R 323097 CDS YP_571854.1 92109567 4025449 complement(85530..86867) 1 NC_007960.1 conjugation TrbI-like protein 86867 4025449 Nham_4438 Nitrobacter hamburgensis X14 conjugation TrbI-like protein YP_571854.1 85530 R 323097 CDS YP_571855.1 92109568 4025450 complement(86874..87677) 1 NC_007960.1 conjugal transfer protein TrbG/VirB9/CagX 87677 4025450 Nham_4439 Nitrobacter hamburgensis X14 conjugal transfer protein TrbG/VirB9/CagX YP_571855.1 86874 R 323097 CDS YP_571856.1 92109569 4025451 complement(87674..88390) 1 NC_007960.1 VirB8 88390 4025451 Nham_4440 Nitrobacter hamburgensis X14 VirB8 YP_571856.1 87674 R 323097 CDS YP_571857.1 92109570 4025452 complement(88387..89517) 1 NC_007960.1 TrbL/VirB6 plasmid conjugal transfer protein 89517 4025452 Nham_4441 Nitrobacter hamburgensis X14 TrbL/VirB6 plasmid conjugal transfer protein YP_571857.1 88387 R 323097 CDS YP_571858.1 92109571 4025453 complement(89714..89923) 1 NC_007960.1 hypothetical protein 89923 4025453 Nham_4442 Nitrobacter hamburgensis X14 hypothetical protein YP_571858.1 89714 R 323097 CDS YP_571859.1 92109572 4025454 complement(89920..90639) 1 NC_007960.1 conjugal transfer protein 90639 4025454 Nham_4443 Nitrobacter hamburgensis X14 conjugal transfer protein YP_571859.1 89920 R 323097 CDS YP_571860.1 92109573 4025455 complement(90650..91543) 1 NC_007960.1 hypothetical protein 91543 4025455 Nham_4444 Nitrobacter hamburgensis X14 hypothetical protein YP_571860.1 90650 R 323097 CDS YP_571861.1 92109574 4025456 complement(91540..93951) 1 NC_007960.1 type IV secretion/conjugal transfer ATPase 93951 4025456 Nham_4445 Nitrobacter hamburgensis X14 type IV secretion/conjugal transfer ATPase YP_571861.1 91540 R 323097 CDS YP_571862.1 92109575 4025457 complement(93962..94258) 1 NC_007960.1 type IV secretory pathway, VirB3-like 94258 4025457 Nham_4446 Nitrobacter hamburgensis X14 type IV secretory pathway, VirB3-like YP_571862.1 93962 R 323097 CDS YP_571863.1 92109576 4025458 complement(94255..94560) 1 NC_007960.1 conjugal transfer protein, trbC 94560 4025458 Nham_4447 Nitrobacter hamburgensis X14 conjugal transfer protein, trbC YP_571863.1 94255 R 323097 CDS YP_571864.1 92109577 4025459 complement(94575..95327) 1 NC_007960.1 lytic transglycosylase, catalytic 95327 4025459 Nham_4448 Nitrobacter hamburgensis X14 lytic transglycosylase, catalytic YP_571864.1 94575 R 323097 CDS YP_571865.1 92109578 4025460 95428..95937 1 NC_007960.1 hypothetical protein 95937 4025460 Nham_4449 Nitrobacter hamburgensis X14 hypothetical protein YP_571865.1 95428 D 323097 CDS YP_571866.1 92109579 4025461 95939..96538 1 NC_007960.1 succinoglycan biosynthesis protein exoI-like 96538 4025461 Nham_4450 Nitrobacter hamburgensis X14 succinoglycan biosynthesis protein exoI-like YP_571866.1 95939 D 323097 CDS YP_571867.1 92109580 4025462 96567..96905 1 NC_007960.1 single-strand binding protein/primosomal replication protein n 96905 4025462 Nham_4451 Nitrobacter hamburgensis X14 single-strand binding protein/primosomal replication protein n YP_571867.1 96567 D 323097 CDS YP_571868.1 92109581 4025463 96892..97476 1 NC_007960.1 hypothetical protein 97476 4025463 Nham_4452 Nitrobacter hamburgensis X14 hypothetical protein YP_571868.1 96892 D 323097 CDS YP_571869.1 92109582 4025464 97473..98021 1 NC_007960.1 hypothetical protein 98021 4025464 Nham_4453 Nitrobacter hamburgensis X14 hypothetical protein YP_571869.1 97473 D 323097 CDS YP_571870.1 92109583 4025465 98031..98696 1 NC_007960.1 hypothetical protein 98696 4025465 Nham_4454 Nitrobacter hamburgensis X14 hypothetical protein YP_571870.1 98031 D 323097 CDS YP_571871.1 92109584 4025466 98723..99205 1 NC_007960.1 hypothetical protein 99205 4025466 Nham_4455 Nitrobacter hamburgensis X14 hypothetical protein YP_571871.1 98723 D 323097 CDS YP_571872.1 92109585 4025467 99202..99894 1 NC_007960.1 hypothetical protein 99894 4025467 Nham_4456 Nitrobacter hamburgensis X14 hypothetical protein YP_571872.1 99202 D 323097 CDS YP_571873.1 92109586 4025468 101024..102037 1 NC_007960.1 hypothetical protein 102037 4025468 Nham_4457 Nitrobacter hamburgensis X14 hypothetical protein YP_571873.1 101024 D 323097 CDS YP_571874.1 92109587 4025469 102034..102522 1 NC_007960.1 putative threonine efflux protein 102522 4025469 Nham_4458 Nitrobacter hamburgensis X14 putative threonine efflux protein YP_571874.1 102034 D 323097 CDS YP_571875.1 92109588 4025470 102515..104383 1 NC_007960.1 hypothetical protein 104383 4025470 Nham_4459 Nitrobacter hamburgensis X14 hypothetical protein YP_571875.1 102515 D 323097 CDS YP_571876.1 92109589 4025471 104409..105296 1 NC_007960.1 hypothetical protein 105296 4025471 Nham_4460 Nitrobacter hamburgensis X14 hypothetical protein YP_571876.1 104409 D 323097 CDS YP_571877.1 92109590 4025472 105421..106866 1 NC_007960.1 hypothetical protein 106866 4025472 Nham_4461 Nitrobacter hamburgensis X14 hypothetical protein YP_571877.1 105421 D 323097 CDS YP_571878.1 92109591 4025474 107776..108690 1 NC_007960.1 hypothetical protein 108690 4025474 Nham_4463 Nitrobacter hamburgensis X14 hypothetical protein YP_571878.1 107776 D 323097 CDS YP_571879.1 92109592 4025475 108692..112255 1 NC_007960.1 DEAD/DEAH box helicase-like 112255 4025475 Nham_4464 Nitrobacter hamburgensis X14 DEAD/DEAH box helicase-like YP_571879.1 108692 D 323097 CDS YP_571880.1 92109593 4025476 complement(112568..112813) 1 NC_007960.1 hypothetical protein 112813 4025476 Nham_4465 Nitrobacter hamburgensis X14 hypothetical protein YP_571880.1 112568 R 323097 CDS YP_571881.1 92109594 4025477 complement(112846..113469) 1 NC_007960.1 autoinducer synthase 113469 4025477 Nham_4466 Nitrobacter hamburgensis X14 autoinducer synthase YP_571881.1 112846 R 323097 CDS YP_571882.1 92109595 4025479 complement(113996..114313) 1 NC_007960.1 hypothetical protein 114313 4025479 Nham_4468 Nitrobacter hamburgensis X14 hypothetical protein YP_571882.1 113996 R 323097 CDS YP_571883.1 92109596 4025480 114574..114750 1 NC_007960.1 hypothetical protein 114750 4025480 Nham_4469 Nitrobacter hamburgensis X14 hypothetical protein YP_571883.1 114574 D 323097 CDS YP_571884.1 92109597 4025481 114957..115883 1 NC_007960.1 hypothetical protein 115883 4025481 Nham_4470 Nitrobacter hamburgensis X14 hypothetical protein YP_571884.1 114957 D 323097 CDS YP_571885.1 92109598 4025482 116016..116429 1 NC_007960.1 hypothetical protein 116429 4025482 Nham_4471 Nitrobacter hamburgensis X14 hypothetical protein YP_571885.1 116016 D 323097 CDS YP_571886.1 92109599 4025483 116426..116689 1 NC_007960.1 hypothetical protein 116689 4025483 Nham_4472 Nitrobacter hamburgensis X14 hypothetical protein YP_571886.1 116426 D 323097 CDS YP_571887.1 92109600 4025484 116867..117355 1 NC_007960.1 hypothetical protein 117355 4025484 Nham_4473 Nitrobacter hamburgensis X14 hypothetical protein YP_571887.1 116867 D 323097 CDS YP_571888.1 92109601 4025485 117468..118073 1 NC_007960.1 hypothetical protein 118073 4025485 Nham_4474 Nitrobacter hamburgensis X14 hypothetical protein YP_571888.1 117468 D 323097 CDS YP_571889.1 92109602 4025486 118090..118284 1 NC_007960.1 hypothetical protein 118284 4025486 Nham_4475 Nitrobacter hamburgensis X14 hypothetical protein YP_571889.1 118090 D 323097 CDS YP_571890.1 92109603 4025487 118388..123499 1 NC_007960.1 helicase-like 123499 4025487 Nham_4476 Nitrobacter hamburgensis X14 helicase-like YP_571890.1 118388 D 323097 CDS YP_571891.1 92109604 4025488 123748..125430 1 NC_007960.1 ParB family; plasmid partitioning protein 125430 4025488 Nham_4477 Nitrobacter hamburgensis X14 plasmid partitioning protein YP_571891.1 123748 D 323097 CDS YP_571892.1 92109605 4025489 125517..125990 1 NC_007960.1 hypothetical protein 125990 4025489 Nham_4478 Nitrobacter hamburgensis X14 hypothetical protein YP_571892.1 125517 D 323097 CDS YP_571893.1 92109606 4025490 125987..126859 1 NC_007960.1 hypothetical protein 126859 4025490 Nham_4479 Nitrobacter hamburgensis X14 hypothetical protein YP_571893.1 125987 D 323097 CDS YP_571894.1 92109607 4025491 126856..127314 1 NC_007960.1 hypothetical protein 127314 4025491 Nham_4480 Nitrobacter hamburgensis X14 hypothetical protein YP_571894.1 126856 D 323097 CDS YP_571895.1 92109608 4025492 127311..127718 1 NC_007960.1 hypothetical protein 127718 4025492 Nham_4481 Nitrobacter hamburgensis X14 hypothetical protein YP_571895.1 127311 D 323097 CDS YP_571896.1 92109609 4025493 128030..128617 1 NC_007960.1 hypothetical protein 128617 4025493 Nham_4482 Nitrobacter hamburgensis X14 hypothetical protein YP_571896.1 128030 D 323097 CDS YP_571897.1 92109610 4025494 128906..129832 1 NC_007960.1 ArdC gene in pSa(IncW plasmid)-like 129832 4025494 Nham_4483 Nitrobacter hamburgensis X14 ArdC gene in pSa(IncW plasmid)-like YP_571897.1 128906 D 323097 CDS YP_571898.1 92109611 4025495 130464..130814 1 NC_007960.1 hypothetical protein 130814 4025495 Nham_4484 Nitrobacter hamburgensis X14 hypothetical protein YP_571898.1 130464 D 323097 CDS YP_571899.1 92109612 4025496 130997..132019 1 NC_007960.1 luciferase-like 132019 4025496 Nham_4485 Nitrobacter hamburgensis X14 luciferase-like YP_571899.1 130997 D 323097 CDS YP_571900.1 92109613 4025497 complement(132038..132316) 1 NC_007960.1 hypothetical protein 132316 4025497 Nham_4486 Nitrobacter hamburgensis X14 hypothetical protein YP_571900.1 132038 R 323097 CDS YP_571901.1 92109614 4025498 complement(132456..132674) 1 NC_007960.1 hypothetical protein 132674 4025498 Nham_4487 Nitrobacter hamburgensis X14 hypothetical protein YP_571901.1 132456 R 323097 CDS YP_571902.1 92109615 4025499 133163..134437 1 NC_007960.1 hypothetical protein 134437 4025499 Nham_4488 Nitrobacter hamburgensis X14 hypothetical protein YP_571902.1 133163 D 323097 CDS YP_571903.1 92109616 4025500 complement(134519..135442) 1 NC_007960.1 hypothetical protein 135442 4025500 Nham_4489 Nitrobacter hamburgensis X14 hypothetical protein YP_571903.1 134519 R 323097 CDS YP_571904.1 92109617 4025501 complement(135439..135939) 1 NC_007960.1 hypothetical protein 135939 4025501 Nham_4490 Nitrobacter hamburgensis X14 hypothetical protein YP_571904.1 135439 R 323097 CDS YP_571905.1 92109618 4025502 complement(135945..136565) 1 NC_007960.1 hypothetical protein 136565 4025502 Nham_4491 Nitrobacter hamburgensis X14 hypothetical protein YP_571905.1 135945 R 323097 CDS YP_571906.1 92109619 4025503 complement(136562..136774) 1 NC_007960.1 CopG-like DNA-binding 136774 4025503 Nham_4492 Nitrobacter hamburgensis X14 CopG-like DNA-binding YP_571906.1 136562 R 323097 CDS YP_571907.1 92109620 4025504 136934..137899 1 NC_007960.1 DNA polymerase, beta-like region 137899 4025504 Nham_4493 Nitrobacter hamburgensis X14 DNA polymerase, beta-like region YP_571907.1 136934 D 323097 CDS YP_571908.1 92109621 4025505 137909..138424 1 NC_007960.1 hypothetical protein 138424 4025505 Nham_4494 Nitrobacter hamburgensis X14 hypothetical protein YP_571908.1 137909 D 323097 CDS YP_571909.1 92109622 4025506 138424..139371 1 NC_007960.1 AAA ATPase, central region 139371 4025506 Nham_4495 Nitrobacter hamburgensis X14 AAA ATPase, central region YP_571909.1 138424 D 323097 CDS YP_571910.1 92109623 4025507 139382..140920 1 NC_007960.1 hypothetical protein 140920 4025507 Nham_4496 Nitrobacter hamburgensis X14 hypothetical protein YP_571910.1 139382 D 323097 CDS YP_571911.1 92109624 4025509 141250..141699 1 NC_007960.1 hypothetical protein 141699 4025509 Nham_4498 Nitrobacter hamburgensis X14 hypothetical protein YP_571911.1 141250 D 323097 CDS YP_571912.1 92109625 4025510 141946..144711 1 NC_007960.1 putative DNA methylase 144711 4025510 Nham_4499 Nitrobacter hamburgensis X14 putative DNA methylase YP_571912.1 141946 D 323097 CDS YP_571913.1 92109626 4025511 144708..146786 1 NC_007960.1 DEAD/DEAH box helicase-like 146786 4025511 Nham_4500 Nitrobacter hamburgensis X14 DEAD/DEAH box helicase-like YP_571913.1 144708 D 323097 CDS YP_571914.1 92109627 4025512 146776..148005 1 NC_007960.1 hypothetical protein 148005 4025512 Nham_4501 Nitrobacter hamburgensis X14 hypothetical protein YP_571914.1 146776 D 323097 CDS YP_571915.1 92109628 4025513 148292..150496 1 NC_007960.1 ATPase 150496 4025513 Nham_4502 Nitrobacter hamburgensis X14 ATPase YP_571915.1 148292 D 323097 CDS YP_571916.1 92109629 4025514 150509..151594 1 NC_007960.1 McrC protein together with McrB forms the McrBC restriction system; recognizes N4- and C5-methylcytosine (and 5-hydroxy-methylcytosines); appears to act against 5-methylcytosine preceded by a purine residue; MrcC modulates the specificty of McrB and has DNA cleavage activity; 5-methylcytosine-specific restriction enzyme subunit McrC 151594 4025514 Nham_4503 Nitrobacter hamburgensis X14 5-methylcytosine-specific restriction enzyme subunit McrC YP_571916.1 150509 D 323097 CDS YP_571917.1 92109630 4025515 151764..152447 1 NC_007960.1 hypothetical protein 152447 4025515 Nham_4504 Nitrobacter hamburgensis X14 hypothetical protein YP_571917.1 151764 D 323097 CDS YP_571918.1 92109631 4025516 complement(152709..153923) 1 NC_007960.1 hypothetical protein 153923 4025516 Nham_4505 Nitrobacter hamburgensis X14 hypothetical protein YP_571918.1 152709 R 323097 CDS YP_571919.1 92109632 4025517 153924..155606 1 NC_007960.1 integrase catalytic subunit 155606 4025517 Nham_4506 Nitrobacter hamburgensis X14 integrase catalytic subunit YP_571919.1 153924 D 323097 CDS YP_571920.1 92109633 4025518 155610..156500 1 NC_007960.1 TniB 156500 4025518 Nham_4507 Nitrobacter hamburgensis X14 TniB YP_571920.1 155610 D 323097 CDS YP_571921.1 92109634 4025519 156497..157417 1 NC_007960.1 hypothetical protein 157417 4025519 Nham_4508 Nitrobacter hamburgensis X14 hypothetical protein YP_571921.1 156497 D 323097 CDS YP_571922.1 92109635 4025520 complement(157378..158088) 1 NC_007960.1 putative transcriptional regulator 158088 4025520 Nham_4509 Nitrobacter hamburgensis X14 putative transcriptional regulator YP_571922.1 157378 R 323097 CDS YP_571923.1 92109636 4025521 complement(158151..159056) 1 NC_007960.1 hypothetical protein 159056 4025521 Nham_4510 Nitrobacter hamburgensis X14 hypothetical protein YP_571923.1 158151 R 323097 CDS YP_571924.1 92109637 4025522 159191..160300 1 NC_007960.1 phage integrase 160300 4025522 Nham_4511 Nitrobacter hamburgensis X14 phage integrase YP_571924.1 159191 D 323097 CDS YP_571925.1 92109638 4025523 complement(160739..161185) 1 NC_007960.1 hypothetical protein 161185 4025523 Nham_4512 Nitrobacter hamburgensis X14 hypothetical protein YP_571925.1 160739 R 323097 CDS YP_571926.1 92109639 4025524 complement(161172..161447) 1 NC_007960.1 prevent-host-death protein 161447 4025524 Nham_4513 Nitrobacter hamburgensis X14 prevent-host-death protein YP_571926.1 161172 R 323097 CDS YP_571927.1 92109640 4025574 161562..161837 1 NC_007960.1 prevent-host-death protein 161837 4025574 Nham_4514 Nitrobacter hamburgensis X14 prevent-host-death protein YP_571927.1 161562 D 323097 CDS YP_571928.1 92109641 4025284 162229..163497 1 NC_007960.1 phage integrase 163497 4025284 Nham_4516 Nitrobacter hamburgensis X14 phage integrase YP_571928.1 162229 D 323097 CDS YP_571929.1 92109642 4025285 163691..164896 1 NC_007960.1 cobyrinic acid a,c-diamide synthase 164896 4025285 Nham_4517 Nitrobacter hamburgensis X14 cobyrinic acid a,c-diamide synthase YP_571929.1 163691 D 323097 CDS YP_571930.1 92109643 4025286 164899..165918 1 NC_007960.1 parB-like partition proteins 165918 4025286 Nham_4518 Nitrobacter hamburgensis X14 parB-like partition proteins YP_571930.1 164899 D 323097 CDS YP_571931.1 92109644 4025287 166144..167376 1 NC_007960.1 replication initiation protein RepC 167376 4025287 Nham_4519 Nitrobacter hamburgensis X14 replication initiation protein RepC YP_571931.1 166144 D 323097 CDS YP_571932.1 92109645 4025288 167995..168327 1 NC_007960.1 single-strand binding protein/primosomal replication protein n 168327 4025288 Nham_4520 Nitrobacter hamburgensis X14 single-strand binding protein/primosomal replication protein n YP_571932.1 167995 D 323097 CDS YP_571933.1 92109646 4025289 complement(168416..168787) 1 NC_007960.1 putative transcriptional regulator 168787 4025289 Nham_4521 Nitrobacter hamburgensis X14 putative transcriptional regulator YP_571933.1 168416 R 323097 CDS YP_571934.1 92109647 4025290 complement(168897..169208) 1 NC_007960.1 transcriptional regulator 169208 4025290 Nham_4522 Nitrobacter hamburgensis X14 transcriptional regulator YP_571934.1 168897 R 323097 CDS YP_571935.1 92109648 4025291 169374..170999 1 NC_007960.1 replication protein C 170999 4025291 Nham_4523 Nitrobacter hamburgensis X14 replication protein C YP_571935.1 169374 D 323097 CDS YP_571936.1 92109649 4025292 complement(171049..171462) 1 NC_007960.1 hypothetical protein 171462 4025292 Nham_4524 Nitrobacter hamburgensis X14 hypothetical protein YP_571936.1 171049 R 323097 CDS YP_571937.1 92109650 4025293 complement(171459..172214) 1 NC_007960.1 cobyrinic acid a,c-diamide synthase 172214 4025293 Nham_4525 Nitrobacter hamburgensis X14 cobyrinic acid a,c-diamide synthase YP_571937.1 171459 R 323097 CDS YP_571938.1 92109651 4025294 172699..173127 1 NC_007960.1 hypothetical protein 173127 4025294 Nham_4526 Nitrobacter hamburgensis X14 hypothetical protein YP_571938.1 172699 D 323097 CDS YP_571939.1 92109652 4025295 173229..175466 1 NC_007960.1 hypothetical protein 175466 4025295 Nham_4527 Nitrobacter hamburgensis X14 hypothetical protein YP_571939.1 173229 D 323097 CDS YP_571940.1 92109653 4025297 176212..176583 1 NC_007960.1 hypothetical protein 176583 4025297 Nham_4529 Nitrobacter hamburgensis X14 hypothetical protein YP_571940.1 176212 D 323097 CDS YP_571941.1 92109654 4025298 176638..177915 1 NC_007960.1 outer membrane efflux protein 177915 4025298 Nham_4530 Nitrobacter hamburgensis X14 outer membrane efflux protein YP_571941.1 176638 D 323097 CDS YP_571942.1 92109655 4025299 177912..178862 1 NC_007960.1 secretion protein HlyD 178862 4025299 Nham_4531 Nitrobacter hamburgensis X14 secretion protein HlyD YP_571942.1 177912 D 323097 CDS YP_571943.1 92109656 4025300 178852..179217 1 NC_007960.1 nitrogen regulatory protein P-II (GlnB, GlnK) 179217 4025300 Nham_4532 Nitrobacter hamburgensis X14 nitrogen regulatory protein P-II (GlnB, GlnK) YP_571943.1 178852 D 323097 CDS YP_571944.1 92109657 4025301 179210..182419 1 NC_007960.1 heavy metal efflux pump CzcA 182419 4025301 Nham_4533 Nitrobacter hamburgensis X14 heavy metal efflux pump CzcA YP_571944.1 179210 D 323097 CDS YP_571945.1 92109658 4025303 182973..185177 1 NC_007960.1 heavy metal translocating P-type ATPase 185177 4025303 Nham_4535 Nitrobacter hamburgensis X14 heavy metal translocating P-type ATPase YP_571945.1 182973 D 323097 CDS YP_571946.1 92109659 4025304 185354..185638 1 NC_007960.1 type IV pilus assembly PilZ 185638 4025304 Nham_4536 Nitrobacter hamburgensis X14 type IV pilus assembly PilZ YP_571946.1 185354 D 323097 CDS YP_571947.1 92109660 4025305 185607..186200 1 NC_007960.1 hypothetical protein 186200 4025305 Nham_4537 Nitrobacter hamburgensis X14 hypothetical protein YP_571947.1 185607 D 323097 CDS YP_571948.1 92109661 4025306 186204..186719 1 NC_007960.1 hypothetical protein 186719 4025306 Nham_4538 Nitrobacter hamburgensis X14 hypothetical protein YP_571948.1 186204 D 323097 CDS YP_571949.1 92109662 4025307 complement(187482..188288) 1 NC_007960.1 purine phosphorylases family protein 1 188288 4025307 Nham_4539 Nitrobacter hamburgensis X14 purine phosphorylases family protein 1 YP_571949.1 187482 R 323097 CDS YP_571950.1 92109664 4025308 122..3445 1 NC_007961.1 conjugal transfer system TraA; oriT nicking enzyme; Dtr system oriT relaxase 3445 4025308 Nham_4540 Nitrobacter hamburgensis X14 Dtr system oriT relaxase YP_571950.1 122 D 323097 CDS YP_571951.1 92109665 4025309 3442..3975 1 NC_007961.1 conjugal transfer pilin processing protease TraF 3975 4025309 Nham_4541 Nitrobacter hamburgensis X14 conjugal transfer pilin processing protease TraF YP_571951.1 3442 D 323097 CDS YP_571952.1 92109666 4025310 3995..5131 1 NC_007961.1 conjugal transfer protein TraB 5131 4025310 Nham_4542 Nitrobacter hamburgensis X14 conjugal transfer protein TraB YP_571952.1 3995 D 323097 CDS YP_571953.1 92109667 4025311 5143..5766 1 NC_007961.1 conjugal transfer protein TraH 5766 4025311 Nham_4543 Nitrobacter hamburgensis X14 conjugal transfer protein TraH YP_571953.1 5143 D 323097 CDS YP_571954.1 92109668 4025314 7284..8003 1 NC_007961.1 hypothetical protein 8003 4025314 Nham_4546 Nitrobacter hamburgensis X14 hypothetical protein YP_571954.1 7284 D 323097 CDS YP_571955.1 92109669 4025316 8473..8919 1 NC_007961.1 hypothetical protein 8919 4025316 Nham_4548 Nitrobacter hamburgensis X14 hypothetical protein YP_571955.1 8473 D 323097 CDS YP_571956.1 92109670 4025317 complement(8944..9324) 1 NC_007961.1 hypothetical protein 9324 4025317 Nham_4549 Nitrobacter hamburgensis X14 hypothetical protein YP_571956.1 8944 R 323097 CDS YP_571957.1 92109671 4025318 complement(9433..9933) 1 NC_007961.1 heat shock protein Hsp20 9933 4025318 Nham_4550 Nitrobacter hamburgensis X14 heat shock protein Hsp20 YP_571957.1 9433 R 323097 CDS YP_571958.1 92109672 4025319 complement(10019..10480) 1 NC_007961.1 heat shock protein Hsp20 10480 4025319 Nham_4551 Nitrobacter hamburgensis X14 heat shock protein Hsp20 YP_571958.1 10019 R 323097 CDS YP_571959.1 92109673 4025320 complement(10615..10905) 1 NC_007961.1 hypothetical protein 10905 4025320 Nham_4552 Nitrobacter hamburgensis X14 hypothetical protein YP_571959.1 10615 R 323097 CDS YP_571960.1 92109674 4025321 complement(10902..11330) 1 NC_007961.1 PilT protein-like 11330 4025321 Nham_4553 Nitrobacter hamburgensis X14 PilT protein-like YP_571960.1 10902 R 323097 CDS YP_571961.1 92109675 4025322 11687..11944 1 NC_007961.1 hypothetical protein 11944 4025322 Nham_4554 Nitrobacter hamburgensis X14 hypothetical protein YP_571961.1 11687 D 323097 CDS YP_571962.1 92109676 4025323 11949..12368 1 NC_007961.1 hypothetical protein 12368 4025323 Nham_4555 Nitrobacter hamburgensis X14 hypothetical protein YP_571962.1 11949 D 323097 CDS YP_571963.1 92109677 4025324 complement(13055..14200) 1 NC_007961.1 transposase IS116/IS110/IS902 14200 4025324 Nham_4556 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_571963.1 13055 R 323097 CDS YP_571964.1 92109678 4025325 14413..14742 1 NC_007961.1 hypothetical protein 14742 4025325 Nham_4557 Nitrobacter hamburgensis X14 hypothetical protein YP_571964.1 14413 D 323097 CDS YP_571965.1 92109679 4025326 complement(14844..15548) 1 NC_007961.1 LuxR family transcriptional regulator 15548 4025326 Nham_4558 Nitrobacter hamburgensis X14 LuxR family transcriptional regulator YP_571965.1 14844 R 323097 CDS YP_571966.1 92109680 4025327 complement(15988..17289) 1 NC_007961.1 conjugal transfer protein TrbI 17289 4025327 Nham_4559 Nitrobacter hamburgensis X14 conjugal transfer protein TrbI YP_571966.1 15988 R 323097 CDS YP_571967.1 92109681 4025328 complement(17300..17752) 1 NC_007961.1 conjugal transfer protein TrbH 17752 4025328 Nham_4560 Nitrobacter hamburgensis X14 conjugal transfer protein TrbH YP_571967.1 17300 R 323097 CDS YP_571968.1 92109682 4025329 complement(17755..18594) 1 NC_007961.1 conjugal transfer protein TrbG 18594 4025329 Nham_4561 Nitrobacter hamburgensis X14 conjugal transfer protein TrbG YP_571968.1 17755 R 323097 CDS YP_571969.1 92109683 4025330 complement(18612..19274) 1 NC_007961.1 conjugal transfer protein TrbF 19274 4025330 Nham_4562 Nitrobacter hamburgensis X14 conjugal transfer protein TrbF YP_571969.1 18612 R 323097 CDS YP_571970.1 92109684 4025331 complement(19317..20471) 1 NC_007961.1 conjugal transfer protein TrbL 20471 4025331 Nham_4563 Nitrobacter hamburgensis X14 conjugal transfer protein TrbL YP_571970.1 19317 R 323097 CDS YP_571971.1 92109685 4025332 complement(20484..20669) 1 NC_007961.1 hypothetical protein 20669 4025332 Nham_4564 Nitrobacter hamburgensis X14 hypothetical protein YP_571971.1 20484 R 323097 CDS YP_571972.1 92109686 4025333 complement(20666..21463) 1 NC_007961.1 conjugal transfer protein TrbJ 21463 4025333 Nham_4565 Nitrobacter hamburgensis X14 conjugal transfer protein TrbJ YP_571972.1 20666 R 323097 CDS YP_571973.1 92109687 4025334 complement(21435..23888) 1 NC_007961.1 type IV secretion system ATPase; VirB4 family; conjugal transfer protein TrbE 23888 4025334 Nham_4566 Nitrobacter hamburgensis X14 conjugal transfer protein TrbE YP_571973.1 21435 R 323097 CDS YP_571974.1 92109688 4025335 complement(23898..24197) 1 NC_007961.1 conjugal transfer protein TrbD 24197 4025335 Nham_4567 Nitrobacter hamburgensis X14 conjugal transfer protein TrbD YP_571974.1 23898 R 323097 CDS YP_571975.1 92109689 4025336 complement(24190..24561) 1 NC_007961.1 conjugal transfer protein TrbC 24561 4025336 Nham_4568 Nitrobacter hamburgensis X14 conjugal transfer protein TrbC YP_571975.1 24190 R 323097 CDS YP_571976.1 92109690 4025337 complement(24551..25540) 1 NC_007961.1 VirB11 family protein; ATPase; conjugal transfer protein TrbB 25540 4025337 Nham_4569 Nitrobacter hamburgensis X14 conjugal transfer protein TrbB YP_571976.1 24551 R 323097 CDS YP_571977.1 92109691 4025338 complement(25537..26160) 1 NC_007961.1 autoinducer synthesis protein 26160 4025338 Nham_4570 Nitrobacter hamburgensis X14 autoinducer synthesis protein YP_571977.1 25537 R 323097 CDS YP_571978.1 92109692 4025339 26576..27790 1 NC_007961.1 cobyrinic acid a,c-diamide synthase 27790 4025339 Nham_4571 Nitrobacter hamburgensis X14 cobyrinic acid a,c-diamide synthase YP_571978.1 26576 D 323097 CDS YP_571979.1 92109693 4025340 27787..28818 1 NC_007961.1 parB-like partition proteins 28818 4025340 Nham_4572 Nitrobacter hamburgensis X14 parB-like partition proteins YP_571979.1 27787 D 323097 CDS YP_571980.1 92109694 4025341 29095..30420 1 NC_007961.1 replication initiation protein RepC 30420 4025341 Nham_4573 Nitrobacter hamburgensis X14 replication initiation protein RepC YP_571980.1 29095 D 323097 CDS YP_571981.1 92109695 4025342 30442..30750 1 NC_007961.1 hypothetical protein 30750 4025342 Nham_4574 Nitrobacter hamburgensis X14 hypothetical protein YP_571981.1 30442 D 323097 CDS YP_571982.1 92109696 4025343 30747..31160 1 NC_007961.1 PilT protein-like 31160 4025343 Nham_4575 Nitrobacter hamburgensis X14 PilT protein-like YP_571982.1 30747 D 323097 CDS YP_571983.1 92109697 4025344 complement(31165..32238) 1 NC_007961.1 phage integrase 32238 4025344 Nham_4576 Nitrobacter hamburgensis X14 phage integrase YP_571983.1 31165 R 323097 CDS YP_571984.1 92109698 4025345 complement(32241..32627) 1 NC_007961.1 PilT protein-like 32627 4025345 Nham_4577 Nitrobacter hamburgensis X14 PilT protein-like YP_571984.1 32241 R 323097 CDS YP_571985.1 92109699 4025346 complement(32627..32881) 1 NC_007961.1 Rv0623-like transcription factor 32881 4025346 Nham_4578 Nitrobacter hamburgensis X14 Rv0623-like transcription factor YP_571985.1 32627 R 323097 CDS YP_571986.1 92109700 4025347 33183..34838 1 NC_007961.1 integrase catalytic subunit 34838 4025347 Nham_4579 Nitrobacter hamburgensis X14 integrase catalytic subunit YP_571986.1 33183 D 323097 CDS YP_571987.1 92109701 4025348 34835..35758 1 NC_007961.1 TniB 35758 4025348 Nham_4580 Nitrobacter hamburgensis X14 TniB YP_571987.1 34835 D 323097 CDS YP_571988.1 92109702 4025349 35806..36975 1 NC_007961.1 hypothetical protein 36975 4025349 Nham_4581 Nitrobacter hamburgensis X14 hypothetical protein YP_571988.1 35806 D 323097 CDS YP_571989.1 92109703 4025350 37169..38113 1 NC_007961.1 hypothetical protein 38113 4025350 Nham_4582 Nitrobacter hamburgensis X14 hypothetical protein YP_571989.1 37169 D 323097 CDS YP_571990.1 92109704 4025351 38131..38829 1 NC_007961.1 transcriptional regulator 38829 4025351 Nham_4583 Nitrobacter hamburgensis X14 transcriptional regulator YP_571990.1 38131 D 323097 CDS YP_571991.1 92109705 4025354 40050..40340 1 NC_007961.1 CopG-like DNA-binding 40340 4025354 Nham_4586 Nitrobacter hamburgensis X14 CopG-like DNA-binding YP_571991.1 40050 D 323097 CDS YP_571992.1 92109706 4025355 40328..40843 1 NC_007961.1 GCN5-related N-acetyltransferase 40843 4025355 Nham_4587 Nitrobacter hamburgensis X14 GCN5-related N-acetyltransferase YP_571992.1 40328 D 323097 CDS YP_571993.1 92109707 4025356 41155..42996 1 NC_007961.1 diguanylate cyclase 42996 4025356 Nham_4588 Nitrobacter hamburgensis X14 diguanylate cyclase YP_571993.1 41155 D 323097 CDS YP_571994.1 92109708 4025360 complement(45836..46090) 1 NC_007961.1 hypothetical protein 46090 4025360 Nham_4592 Nitrobacter hamburgensis X14 hypothetical protein YP_571994.1 45836 R 323097 CDS YP_571995.1 92109709 4025361 complement(46083..46616) 1 NC_007961.1 hypothetical protein 46616 4025361 Nham_4593 Nitrobacter hamburgensis X14 hypothetical protein YP_571995.1 46083 R 323097 CDS YP_571996.1 92109710 4025362 complement(46677..48005) 1 NC_007961.1 hypothetical protein 48005 4025362 Nham_4594 Nitrobacter hamburgensis X14 hypothetical protein YP_571996.1 46677 R 323097 CDS YP_571997.1 92109711 4025365 50051..50476 1 NC_007961.1 transposase IS200-like 50476 4025365 Nham_4597 Nitrobacter hamburgensis X14 transposase IS200-like YP_571997.1 50051 D 323097 CDS YP_571998.1 92109712 4025366 50684..51910 1 NC_007961.1 Na+/H+ antiporter NhaA 51910 4025366 Nham_4598 Nitrobacter hamburgensis X14 Na+/H+ antiporter NhaA YP_571998.1 50684 D 323097 CDS YP_571999.1 92109713 4025367 51953..53017 1 NC_007961.1 transposase 53017 4025367 Nham_4599 Nitrobacter hamburgensis X14 transposase YP_571999.1 51953 D 323097 CDS YP_572000.1 92109714 4025368 53096..54199 1 NC_007961.1 feruloyl esterase 54199 4025368 Nham_4600 Nitrobacter hamburgensis X14 feruloyl esterase YP_572000.1 53096 D 323097 CDS YP_572001.1 92109715 4025369 54790..55854 1 NC_007961.1 fatty acid desaturase 55854 4025369 Nham_4601 Nitrobacter hamburgensis X14 fatty acid desaturase YP_572001.1 54790 D 323097 CDS YP_572002.1 92109716 4025370 55920..56873 1 NC_007961.1 esterase, PHB depolymerase 56873 4025370 Nham_4602 Nitrobacter hamburgensis X14 esterase, PHB depolymerase YP_572002.1 55920 D 323097 CDS YP_572003.1 92109717 4025373 complement(57980..61258) 1 NC_007961.1 MCP methyltransferase, CheR-type 61258 4025373 Nham_4605 Nitrobacter hamburgensis X14 MCP methyltransferase, CheR-type YP_572003.1 57980 R 323097 CDS YP_572004.1 92109718 4025433 complement(61332..61805) 1 NC_007961.1 hypothetical protein 61805 4025433 Nham_4606 Nitrobacter hamburgensis X14 hypothetical protein YP_572004.1 61332 R 323097 CDS YP_572005.1 92109719 4025757 62000..63430 1 NC_007961.1 resolvase-like protein 63430 4025757 Nham_4607 Nitrobacter hamburgensis X14 resolvase-like protein YP_572005.1 62000 D 323097 CDS YP_572006.1 92109720 4025761 complement(66743..68224) 1 NC_007961.1 sulphate transporter 68224 4025761 Nham_4611 Nitrobacter hamburgensis X14 sulphate transporter YP_572006.1 66743 R 323097 CDS YP_572007.1 92109721 4025763 69424..70143 1 NC_007961.1 hypothetical protein 70143 4025763 Nham_4613 Nitrobacter hamburgensis X14 hypothetical protein YP_572007.1 69424 D 323097 CDS YP_572008.1 92109722 4025764 70140..70376 1 NC_007961.1 hypothetical protein 70376 4025764 Nham_4614 Nitrobacter hamburgensis X14 hypothetical protein YP_572008.1 70140 D 323097 CDS YP_572009.1 92109723 4025765 70485..70940 1 NC_007961.1 hypothetical protein 70940 4025765 Nham_4615 Nitrobacter hamburgensis X14 hypothetical protein YP_572009.1 70485 D 323097 CDS YP_572010.1 92109724 4025766 70996..71265 1 NC_007961.1 hypothetical protein 71265 4025766 Nham_4616 Nitrobacter hamburgensis X14 hypothetical protein YP_572010.1 70996 D 323097 CDS YP_572011.1 92109725 4025767 71429..72160 1 NC_007961.1 transposase, IS111A/IS1328/IS1533 72160 4025767 Nham_4617 Nitrobacter hamburgensis X14 transposase, IS111A/IS1328/IS1533 YP_572011.1 71429 D 323097 CDS YP_572012.1 92109726 4025768 complement(72649..74013) 1 NC_007961.1 signal transduction histidine kinase 74013 4025768 Nham_4618 Nitrobacter hamburgensis X14 signal transduction histidine kinase YP_572012.1 72649 R 323097 CDS YP_572013.1 92109727 4025770 complement(74752..75144) 1 NC_007961.1 rhodanese-like protein 75144 4025770 Nham_4620 Nitrobacter hamburgensis X14 rhodanese-like protein YP_572013.1 74752 R 323097 CDS YP_572014.1 92109728 4025771 complement(75255..76163) 1 NC_007961.1 beta-lactamase-like 76163 4025771 Nham_4621 Nitrobacter hamburgensis X14 beta-lactamase-like YP_572014.1 75255 R 323097 CDS YP_572015.1 92109729 4025772 complement(76176..76979) 1 NC_007961.1 hypothetical protein 76979 4025772 Nham_4622 Nitrobacter hamburgensis X14 hypothetical protein YP_572015.1 76176 R 323097 CDS YP_572016.1 92109730 4025773 complement(76976..77431) 1 NC_007961.1 hypothetical protein 77431 4025773 Nham_4623 Nitrobacter hamburgensis X14 hypothetical protein YP_572016.1 76976 R 323097 CDS YP_572017.1 92109731 4025774 complement(77435..77860) 1 NC_007961.1 hypothetical protein 77860 4025774 Nham_4624 Nitrobacter hamburgensis X14 hypothetical protein YP_572017.1 77435 R 323097 CDS YP_572018.1 92109732 4025775 79116..79433 1 NC_007961.1 hypothetical protein 79433 4025775 Nham_4625 Nitrobacter hamburgensis X14 hypothetical protein YP_572018.1 79116 D 323097 CDS YP_572019.1 92109733 4025776 complement(79517..80317) 1 NC_007961.1 transposase IS116/IS110/IS902 80317 4025776 Nham_4626 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_572019.1 79517 R 323097 CDS YP_572020.1 92109734 4025779 80954..81574 1 NC_007961.1 hypothetical protein 81574 4025779 Nham_4629 Nitrobacter hamburgensis X14 hypothetical protein YP_572020.1 80954 D 323097 CDS YP_572021.1 92109735 4025780 complement(81637..84042) 1 NC_007961.1 copper-translocating P-type ATPase 84042 4025780 Nham_4630 Nitrobacter hamburgensis X14 copper-translocating P-type ATPase YP_572021.1 81637 R 323097 CDS YP_572022.1 92109736 4025781 84113..84517 1 NC_007961.1 hypothetical protein 84517 4025781 Nham_4631 Nitrobacter hamburgensis X14 hypothetical protein YP_572022.1 84113 D 323097 CDS YP_572023.1 92109737 4025782 84543..84896 1 NC_007961.1 hypothetical protein 84896 4025782 Nham_4632 Nitrobacter hamburgensis X14 hypothetical protein YP_572023.1 84543 D 323097 CDS YP_572024.1 92109738 4025783 84906..86363 1 NC_007961.1 outer membrane efflux protein 86363 4025783 Nham_4633 Nitrobacter hamburgensis X14 outer membrane efflux protein YP_572024.1 84906 D 323097 CDS YP_572025.1 92109739 4025784 86375..87763 1 NC_007961.1 twin-arginine translocation pathway signal 87763 4025784 Nham_4634 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_572025.1 86375 D 323097 CDS YP_572026.1 92109740 4025785 87811..88110 1 NC_007961.1 hypothetical protein 88110 4025785 Nham_4635 Nitrobacter hamburgensis X14 hypothetical protein YP_572026.1 87811 D 323097 CDS YP_572027.1 92109741 4025786 88159..88671 1 NC_007961.1 hypothetical protein 88671 4025786 Nham_4636 Nitrobacter hamburgensis X14 hypothetical protein YP_572027.1 88159 D 323097 CDS YP_572028.1 92109742 4025787 88828..89445 1 NC_007961.1 cytochrome c family protein 89445 4025787 Nham_4637 Nitrobacter hamburgensis X14 cytochrome c family protein YP_572028.1 88828 D 323097 CDS YP_572029.1 92109743 4025788 89872..90297 1 NC_007961.1 hypothetical protein 90297 4025788 Nham_4638 Nitrobacter hamburgensis X14 hypothetical protein YP_572029.1 89872 D 323097 CDS YP_572030.1 92109744 4025789 complement(90404..90907) 1 NC_007961.1 hypothetical protein 90907 4025789 Nham_4639 Nitrobacter hamburgensis X14 hypothetical protein YP_572030.1 90404 R 323097 CDS YP_572031.1 92109745 4025790 complement(90904..91245) 1 NC_007961.1 SohA; PrlF; involved in protein secretion; when overproduced or mutated, it induces growth defect and increased export of a reporter protein; a PrlF mutation induces the activity of the Lon protease, and a Lon-deficient strain suppresses the phenotype conferred by the PrlF mutation; regulator PrlF 91245 4025790 Nham_4640 Nitrobacter hamburgensis X14 regulator PrlF YP_572031.1 90904 R 323097 CDS YP_572032.1 92109746 4025791 complement(91708..92598) 1 NC_007961.1 UbiE/COQ5 methyltransferase 92598 4025791 Nham_4641 Nitrobacter hamburgensis X14 UbiE/COQ5 methyltransferase YP_572032.1 91708 R 323097 CDS YP_572033.1 92109747 4025793 complement(92795..93376) 1 NC_007961.1 thiol--disulfide interchange redox-active center transmembrane protein 93376 4025793 Nham_4643 Nitrobacter hamburgensis X14 thiol--disulfide interchange redox-active center transmembrane protein YP_572033.1 92795 R 323097 CDS YP_572034.1 92109748 4025794 complement(93394..94065) 1 NC_007961.1 hypothetical protein 94065 4025794 Nham_4644 Nitrobacter hamburgensis X14 hypothetical protein YP_572034.1 93394 R 323097 CDS YP_572035.1 92109749 4025795 complement(94062..94697) 1 NC_007961.1 sigma-24 (FecI-like) 94697 4025795 Nham_4645 Nitrobacter hamburgensis X14 sigma-24 (FecI-like) YP_572035.1 94062 R 323097 CDS YP_572036.1 92109750 4025796 95274..95618 1 NC_007961.1 integral membrane protein-like 95618 4025796 Nham_4646 Nitrobacter hamburgensis X14 integral membrane protein-like YP_572036.1 95274 D 323097 CDS YP_572037.1 92109751 4025797 95686..96582 1 NC_007961.1 hypothetical protein 96582 4025797 Nham_4647 Nitrobacter hamburgensis X14 hypothetical protein YP_572037.1 95686 D 323097 CDS YP_572038.1 92109752 4025798 96566..97372 1 NC_007961.1 hypothetical protein 97372 4025798 Nham_4648 Nitrobacter hamburgensis X14 hypothetical protein YP_572038.1 96566 D 323097 CDS YP_572039.1 92109753 4025799 97369..97893 1 NC_007961.1 DoxX 97893 4025799 Nham_4649 Nitrobacter hamburgensis X14 DoxX YP_572039.1 97369 D 323097 CDS YP_572040.1 92109754 4025802 100368..100550 1 NC_007961.1 hypothetical protein 100550 4025802 Nham_4652 Nitrobacter hamburgensis X14 hypothetical protein YP_572040.1 100368 D 323097 CDS YP_572041.1 92109755 4025803 100782..101750 1 NC_007961.1 hypothetical protein 101750 4025803 Nham_4653 Nitrobacter hamburgensis X14 hypothetical protein YP_572041.1 100782 D 323097 CDS YP_572042.1 92109756 4025804 101892..102491 1 NC_007961.1 hypothetical protein 102491 4025804 Nham_4654 Nitrobacter hamburgensis X14 hypothetical protein YP_572042.1 101892 D 323097 CDS YP_572043.1 92109757 4025806 103222..108324 1 NC_007961.1 N-6 DNA methylase 108324 4025806 Nham_4656 Nitrobacter hamburgensis X14 N-6 DNA methylase YP_572043.1 103222 D 323097 CDS YP_572044.1 92109758 4025807 complement(108321..108749) 1 NC_007961.1 XRE family transcriptional regulator 108749 4025807 Nham_4657 Nitrobacter hamburgensis X14 XRE family transcriptional regulator YP_572044.1 108321 R 323097 CDS YP_572045.1 92109759 4025808 complement(108752..109057) 1 NC_007961.1 hypothetical protein 109057 4025808 Nham_4658 Nitrobacter hamburgensis X14 hypothetical protein YP_572045.1 108752 R 323097 CDS YP_572046.1 92109760 4025809 109403..111076 1 NC_007961.1 ParB family; plasmid partitioning protein 111076 4025809 Nham_4659 Nitrobacter hamburgensis X14 plasmid partitioning protein YP_572046.1 109403 D 323097 CDS YP_572047.1 92109761 4025810 111168..111644 1 NC_007961.1 hypothetical protein 111644 4025810 Nham_4660 Nitrobacter hamburgensis X14 hypothetical protein YP_572047.1 111168 D 323097 CDS YP_572048.1 92109762 4025811 111641..112510 1 NC_007961.1 hypothetical protein 112510 4025811 Nham_4661 Nitrobacter hamburgensis X14 hypothetical protein YP_572048.1 111641 D 323097 CDS YP_572049.1 92109763 4025812 112507..112920 1 NC_007961.1 hypothetical protein 112920 4025812 Nham_4662 Nitrobacter hamburgensis X14 hypothetical protein YP_572049.1 112507 D 323097 CDS YP_572050.1 92109764 4025813 112913..113257 1 NC_007961.1 hypothetical protein 113257 4025813 Nham_4663 Nitrobacter hamburgensis X14 hypothetical protein YP_572050.1 112913 D 323097 CDS YP_572051.1 92109765 4025814 113605..114195 1 NC_007961.1 hypothetical protein 114195 4025814 Nham_4664 Nitrobacter hamburgensis X14 hypothetical protein YP_572051.1 113605 D 323097 CDS YP_572052.1 92109766 4025816 114944..115249 1 NC_007961.1 RelB antitoxin 115249 4025816 Nham_4666 Nitrobacter hamburgensis X14 RelB antitoxin YP_572052.1 114944 D 323097 CDS YP_572053.1 92109767 4025817 115246..115557 1 NC_007961.1 addiction module toxin, RelE/StbE 115557 4025817 Nham_4667 Nitrobacter hamburgensis X14 addiction module toxin, RelE/StbE YP_572053.1 115246 D 323097 CDS YP_572054.1 92109768 4025818 complement(115915..116307) 1 NC_007961.1 hypothetical protein 116307 4025818 Nham_4668 Nitrobacter hamburgensis X14 hypothetical protein YP_572054.1 115915 R 323097 CDS YP_572055.1 92109769 4025819 117151..117630 1 NC_007961.1 single-strand binding protein 117630 4025819 Nham_4669 Nitrobacter hamburgensis X14 single-strand binding protein YP_572055.1 117151 D 323097 CDS YP_572056.1 92109770 4025820 complement(117712..117969) 1 NC_007961.1 hypothetical protein 117969 4025820 Nham_4670 Nitrobacter hamburgensis X14 hypothetical protein YP_572056.1 117712 R 323097 CDS YP_572057.1 92109771 4025821 complement(118053..118517) 1 NC_007961.1 nuclease (SNase-like) 118517 4025821 Nham_4671 Nitrobacter hamburgensis X14 nuclease (SNase-like) YP_572057.1 118053 R 323097 CDS YP_572058.1 92109772 4025822 complement(118888..120813) 1 NC_007961.1 VirD4 family; conjugal transfer coupling protein TraG 120813 4025822 Nham_4672 Nitrobacter hamburgensis X14 conjugal transfer coupling protein TraG YP_572058.1 118888 R 323097 CDS YP_572059.1 92109773 4025823 complement(120800..121015) 1 NC_007961.1 conjugal transfer TraD 121015 4025823 Nham_4673 Nitrobacter hamburgensis X14 conjugal transfer TraD YP_572059.1 120800 R 323097 CDS YP_572060.1 92109774 4025824 complement(121020..121280) 1 NC_007961.1 conjugal transfer protein TraC 121280 4025824 Nham_4674 Nitrobacter hamburgensis X14 conjugal transfer protein TraC YP_572060.1 121020 R 323097 CDS YP_575363.1 92115634 4029827 107..1534 1 NC_007964.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1534 dnaA 4029827 dnaA Nitrobacter hamburgensis X14 chromosomal replication initiation protein YP_575363.1 107 D 323097 CDS YP_575364.1 92115635 4029828 1738..2856 1 NC_007964.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 2856 4029828 Nham_0002 Nitrobacter hamburgensis X14 DNA polymerase III subunit beta YP_575364.1 1738 D 323097 CDS YP_575365.1 92115636 4029829 3021..4160 1 NC_007964.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 4160 recF 4029829 recF Nitrobacter hamburgensis X14 recombination protein F YP_575365.1 3021 D 323097 CDS YP_575366.1 92115637 4029830 4459..6900 1 NC_007964.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 6900 gyrB 4029830 gyrB Nitrobacter hamburgensis X14 DNA gyrase subunit B YP_575366.1 4459 D 323097 CDS YP_575367.1 92115638 4029831 complement(7095..8228) 1 NC_007964.1 hypothetical protein 8228 4029831 Nham_0005 Nitrobacter hamburgensis X14 hypothetical protein YP_575367.1 7095 R 323097 CDS YP_575368.1 92115639 4029832 8563..9120 1 NC_007964.1 hypothetical protein 9120 4029832 Nham_0006 Nitrobacter hamburgensis X14 hypothetical protein YP_575368.1 8563 D 323097 CDS YP_575369.1 92115640 4029833 complement(9150..9896) 1 NC_007964.1 hypothetical protein 9896 4029833 Nham_0007 Nitrobacter hamburgensis X14 hypothetical protein YP_575369.1 9150 R 323097 CDS YP_575370.1 92115641 4029834 complement(9957..10241) 1 NC_007964.1 hypothetical protein 10241 4029834 Nham_0008 Nitrobacter hamburgensis X14 hypothetical protein YP_575370.1 9957 R 323097 CDS YP_575371.1 92115642 4029835 10492..11412 1 NC_007964.1 Pirin-like protein 11412 4029835 Nham_0009 Nitrobacter hamburgensis X14 Pirin-like protein YP_575371.1 10492 D 323097 CDS YP_575372.1 92115643 4029836 complement(11419..12420) 1 NC_007964.1 PfkB protein 12420 4029836 Nham_0010 Nitrobacter hamburgensis X14 PfkB protein YP_575372.1 11419 R 323097 CDS YP_575373.1 92115644 4029837 12511..14100 1 NC_007964.1 integral membrane protein MviN 14100 4029837 Nham_0011 Nitrobacter hamburgensis X14 integral membrane protein MviN YP_575373.1 12511 D 323097 CDS YP_575374.1 92115645 4029838 14196..15239 1 NC_007964.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 15239 4029838 Nham_0012 Nitrobacter hamburgensis X14 tryptophanyl-tRNA synthetase YP_575374.1 14196 D 323097 CDS YP_575375.1 92115646 4029839 15511..15861 1 NC_007964.1 ISGsu3, transposase 15861 4029839 Nham_0013 Nitrobacter hamburgensis X14 ISGsu3, transposase YP_575375.1 15511 D 323097 CDS YP_575376.1 92115647 4029840 15896..16621 1 NC_007964.1 transposase, IS4 16621 4029840 Nham_0014 Nitrobacter hamburgensis X14 transposase, IS4 YP_575376.1 15896 D 323097 CDS YP_575377.1 92115648 4029841 16865..17359 1 NC_007964.1 hypothetical protein 17359 4029841 Nham_0015 Nitrobacter hamburgensis X14 hypothetical protein YP_575377.1 16865 D 323097 CDS YP_575378.1 92115649 4029842 17538..18113 1 NC_007964.1 nitrogen-fixing NifU-like 18113 4029842 Nham_0016 Nitrobacter hamburgensis X14 nitrogen-fixing NifU-like YP_575378.1 17538 D 323097 CDS YP_575379.1 92115650 4029843 complement(18143..19273) 1 NC_007964.1 hypothetical protein 19273 4029843 Nham_0017 Nitrobacter hamburgensis X14 hypothetical protein YP_575379.1 18143 R 323097 CDS YP_575380.1 92115651 4029844 19577..20275 1 NC_007964.1 peptidase M22, glycoprotease 20275 4029844 Nham_0018 Nitrobacter hamburgensis X14 peptidase M22, glycoprotease YP_575380.1 19577 D 323097 CDS YP_575381.1 92115652 4029845 20272..20754 1 NC_007964.1 ribosomal-protein-alanine acetyltransferase 20754 4029845 Nham_0019 Nitrobacter hamburgensis X14 ribosomal-protein-alanine acetyltransferase YP_575381.1 20272 D 323097 CDS YP_575382.1 92115653 4029846 20911..21360 1 NC_007964.1 ferric uptake regulator family protein 21360 4029846 Nham_0020 Nitrobacter hamburgensis X14 ferric uptake regulator family protein YP_575382.1 20911 D 323097 CDS YP_575383.1 92115654 4029788 21543..22964 1 NC_007964.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 22964 4029788 Nham_0021 Nitrobacter hamburgensis X14 (dimethylallyl)adenosine tRNA methylthiotransferase YP_575383.1 21543 D 323097 CDS YP_575384.1 92115655 4029789 22969..24018 1 NC_007964.1 PhoH-like protein 24018 4029789 Nham_0022 Nitrobacter hamburgensis X14 PhoH-like protein YP_575384.1 22969 D 323097 CDS YP_575385.1 92115656 4029790 24020..24592 1 NC_007964.1 hypothetical protein 24592 4029790 Nham_0023 Nitrobacter hamburgensis X14 hypothetical protein YP_575385.1 24020 D 323097 CDS YP_575386.1 92115657 4029791 24593..25717 1 NC_007964.1 transporter 25717 4029791 Nham_0024 Nitrobacter hamburgensis X14 transporter YP_575386.1 24593 D 323097 CDS YP_575387.1 92115658 4029792 25714..27339 1 NC_007964.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 27339 lnt 4029792 lnt Nitrobacter hamburgensis X14 apolipoprotein N-acyltransferase YP_575387.1 25714 D 323097 CDS YP_575388.1 92115659 4029793 27538..27957 1 NC_007964.1 XRE family transcriptional regulator 27957 4029793 Nham_0026 Nitrobacter hamburgensis X14 XRE family transcriptional regulator YP_575388.1 27538 D 323097 CDS YP_575389.1 92115660 4029794 27995..28762 1 NC_007964.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 28762 trmB 4029794 trmB Nitrobacter hamburgensis X14 tRNA (guanine-N(7)-)-methyltransferase YP_575389.1 27995 D 323097 CDS YP_575390.1 92115661 4029795 29091..29882 1 NC_007964.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 29882 4029795 Nham_0028 Nitrobacter hamburgensis X14 hypothetical protein YP_575390.1 29091 D 323097 CDS YP_575391.1 92115662 4029796 29886..31496 1 NC_007964.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 31496 nusA 4029796 nusA Nitrobacter hamburgensis X14 transcription elongation factor NusA YP_575391.1 29886 D 323097 CDS YP_575392.1 92115663 4029797 31572..32237 1 NC_007964.1 hypothetical protein 32237 4029797 Nham_0030 Nitrobacter hamburgensis X14 hypothetical protein YP_575392.1 31572 D 323097 CDS YP_575393.1 92115664 4029798 32305..34911 1 NC_007964.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 34911 infB 4029798 infB Nitrobacter hamburgensis X14 translation initiation factor IF-2 YP_575393.1 32305 D 323097 CDS YP_575394.1 92115665 4029799 35047..35460 1 NC_007964.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 35460 rbfA 4029799 rbfA Nitrobacter hamburgensis X14 ribosome-binding factor A YP_575394.1 35047 D 323097 CDS YP_575395.1 92115666 4029800 35466..36704 1 NC_007964.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 36704 truB 4029800 truB Nitrobacter hamburgensis X14 tRNA pseudouridine synthase B YP_575395.1 35466 D 323097 CDS YP_575396.1 92115667 4029801 36707..36976 1 NC_007964.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 36976 rpsO 4029801 rpsO Nitrobacter hamburgensis X14 30S ribosomal protein S15 YP_575396.1 36707 D 323097 CDS YP_575397.1 92115668 4029802 37219..39465 1 NC_007964.1 polynucleotide phosphorylase/polyadenylase 39465 4029802 Nham_0035 Nitrobacter hamburgensis X14 polynucleotide phosphorylase/polyadenylase YP_575397.1 37219 D 323097 CDS YP_575398.1 92115669 4029803 complement(39679..40584) 1 NC_007964.1 LysR family transcriptional regulator 40584 4029803 Nham_0036 Nitrobacter hamburgensis X14 LysR family transcriptional regulator YP_575398.1 39679 R 323097 CDS YP_575399.1 92115670 4029804 40839..43028 1 NC_007964.1 catalase/peroxidase HPI 43028 4029804 Nham_0037 Nitrobacter hamburgensis X14 catalase/peroxidase HPI YP_575399.1 40839 D 323097 CDS YP_575400.1 92115671 4029806 43662..44258 1 NC_007964.1 glutathione S-transferase 44258 4029806 Nham_0039 Nitrobacter hamburgensis X14 glutathione S-transferase YP_575400.1 43662 D 323097 CDS YP_575401.1 92115672 4029750 complement(44413..45261) 1 NC_007964.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 45261 4029750 Nham_0040 Nitrobacter hamburgensis X14 enoyl-ACP reductase YP_575401.1 44413 R 323097 CDS YP_575402.1 92115673 4029751 complement(45427..46650) 1 NC_007964.1 FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 46650 4029751 Nham_0041 Nitrobacter hamburgensis X14 3-oxoacyl-ACP synthase YP_575402.1 45427 R 323097 CDS YP_575403.1 92115674 4029752 complement(46736..47260) 1 NC_007964.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 47260 4029752 Nham_0042 Nitrobacter hamburgensis X14 3-hydroxydecanoyl-ACP dehydratase YP_575403.1 46736 R 323097 CDS YP_575404.1 92115675 4029753 48031..48528 1 NC_007964.1 ferric uptake regulator family protein 48528 4029753 Nham_0043 Nitrobacter hamburgensis X14 ferric uptake regulator family protein YP_575404.1 48031 D 323097 CDS YP_575405.1 92115676 4029754 complement(48625..49182) 1 NC_007964.1 hypothetical protein 49182 4029754 Nham_0044 Nitrobacter hamburgensis X14 hypothetical protein YP_575405.1 48625 R 323097 CDS YP_575406.1 92115677 4029755 49669..50670 1 NC_007964.1 glycolate reductase 50670 4029755 Nham_0045 Nitrobacter hamburgensis X14 glycolate reductase YP_575406.1 49669 D 323097 CDS YP_575407.1 92115678 4029756 complement(50818..51618) 1 NC_007964.1 UBA/THIF-type NAD/FAD binding fold 51618 4029756 Nham_0046 Nitrobacter hamburgensis X14 UBA/THIF-type NAD/FAD binding fold YP_575407.1 50818 R 323097 CDS YP_575408.1 92115679 4029757 51840..53186 1 NC_007964.1 peptidoglycan binding domain-containing protein 53186 4029757 Nham_0047 Nitrobacter hamburgensis X14 peptidoglycan binding domain-containing protein YP_575408.1 51840 D 323097 CDS YP_575409.1 92115680 4029758 complement(53229..54110) 1 NC_007964.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 54110 4029758 Nham_0048 Nitrobacter hamburgensis X14 formamidopyrimidine-DNA glycosylase YP_575409.1 53229 R 323097 CDS YP_575410.1 92115681 4029759 54202..54963 1 NC_007964.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 54963 ubiE 4029759 ubiE Nitrobacter hamburgensis X14 ubiquinone/menaquinone biosynthesis methyltransferase YP_575410.1 54202 D 323097 CDS YP_575411.1 92115682 4029760 54972..56528 1 NC_007964.1 2-polyprenylphenol 6-hydroxylase 56528 4029760 Nham_0050 Nitrobacter hamburgensis X14 2-polyprenylphenol 6-hydroxylase YP_575411.1 54972 D 323097 CDS YP_575412.1 92115683 4029761 56591..58030 1 NC_007964.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; in the alphaproteobacteria, this protein contains an N-terminal SbtC-like domain; bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 58030 4029761 Nham_0051 Nitrobacter hamburgensis X14 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_575412.1 56591 D 323097 CDS YP_575413.1 92115684 4029762 58027..58485 1 NC_007964.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 58485 dut 4029762 dut Nitrobacter hamburgensis X14 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_575413.1 58027 D 323097 CDS YP_575414.1 92115685 4029763 58867..61383 1 NC_007964.1 PAS/PAC sensor signal transduction histidine kinase 61383 4029763 Nham_0053 Nitrobacter hamburgensis X14 PAS/PAC sensor signal transduction histidine kinase YP_575414.1 58867 D 323097 CDS YP_575415.1 92115686 4029764 61380..62903 1 NC_007964.1 hypothetical protein 62903 4029764 Nham_0054 Nitrobacter hamburgensis X14 hypothetical protein YP_575415.1 61380 D 323097 CDS YP_575416.1 92115687 4029765 63003..63323 1 NC_007964.1 hypothetical protein 63323 4029765 Nham_0055 Nitrobacter hamburgensis X14 hypothetical protein YP_575416.1 63003 D 323097 CDS YP_575417.1 92115688 4029766 63590..64312 1 NC_007964.1 nucleotidyl transferase 64312 4029766 Nham_0056 Nitrobacter hamburgensis X14 nucleotidyl transferase YP_575417.1 63590 D 323097 CDS YP_575418.1 92115689 4029767 64411..67560 1 NC_007964.1 hypothetical protein 67560 4029767 Nham_0057 Nitrobacter hamburgensis X14 hypothetical protein YP_575418.1 64411 D 323097 CDS YP_575419.1 92115690 4029768 67557..71045 1 NC_007964.1 UvrD/REP helicase 71045 4029768 Nham_0058 Nitrobacter hamburgensis X14 UvrD/REP helicase YP_575419.1 67557 D 323097 CDS YP_575420.1 92115691 4029769 71144..71464 1 NC_007964.1 thioredoxin 71464 4029769 Nham_0059 Nitrobacter hamburgensis X14 thioredoxin YP_575420.1 71144 D 323097 CDS YP_575421.1 92115692 4029636 complement(71708..73036) 1 NC_007964.1 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 73036 4029636 Nham_0060 Nitrobacter hamburgensis X14 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_575421.1 71708 R 323097 CDS YP_575422.1 92115693 4029637 complement(73033..73977) 1 NC_007964.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 73977 4029637 Nham_0061 Nitrobacter hamburgensis X14 acetyl-CoA carboxylase subunit beta YP_575422.1 73033 R 323097 CDS YP_575423.1 92115694 4029638 complement(74164..75000) 1 NC_007964.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 75000 trpA 4029638 trpA Nitrobacter hamburgensis X14 tryptophan synthase subunit alpha YP_575423.1 74164 R 323097 CDS YP_575424.1 92115695 4029639 complement(74997..76241) 1 NC_007964.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 76241 4029639 Nham_0063 Nitrobacter hamburgensis X14 tryptophan synthase subunit beta YP_575424.1 74997 R 323097 CDS YP_575425.1 92115696 4029640 complement(76389..77066) 1 NC_007964.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 77066 4029640 Nham_0064 Nitrobacter hamburgensis X14 N-(5'-phosphoribosyl)anthranilate isomerase YP_575425.1 76389 R 323097 CDS YP_575426.1 92115697 4029641 complement(77344..77691) 1 NC_007964.1 hypothetical protein 77691 4029641 Nham_0065 Nitrobacter hamburgensis X14 hypothetical protein YP_575426.1 77344 R 323097 CDS YP_575427.1 92115698 4029642 complement(77777..78082) 1 NC_007964.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 78082 ihfB 4029642 ihfB Nitrobacter hamburgensis X14 integration host factor subunit beta YP_575427.1 77777 R 323097 CDS YP_575428.1 92115699 4029643 complement(78251..79228) 1 NC_007964.1 signal peptide peptidase SppA, 36K type 79228 4029643 Nham_0067 Nitrobacter hamburgensis X14 signal peptide peptidase SppA, 36K type YP_575428.1 78251 R 323097 CDS YP_575429.1 92115700 4029644 complement(79411..80151) 1 NC_007964.1 role in sulfur assimilation; CysZ-like protein 80151 4029644 Nham_0068 Nitrobacter hamburgensis X14 CysZ-like protein YP_575429.1 79411 R 323097 CDS YP_575430.1 92115701 4029645 complement(80250..80744) 1 NC_007964.1 hypothetical protein 80744 4029645 Nham_0069 Nitrobacter hamburgensis X14 hypothetical protein YP_575430.1 80250 R 323097 CDS YP_575431.1 92115702 4029646 complement(80741..81676) 1 NC_007964.1 hypothetical protein 81676 4029646 Nham_0070 Nitrobacter hamburgensis X14 hypothetical protein YP_575431.1 80741 R 323097 CDS YP_575432.1 92115703 4029647 81788..83302 1 NC_007964.1 twin-arginine translocation pathway signal 83302 4029647 Nham_0071 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_575432.1 81788 D 323097 CDS YP_575433.1 92115704 4029648 83299..83970 1 NC_007964.1 hypothetical protein 83970 4029648 Nham_0072 Nitrobacter hamburgensis X14 hypothetical protein YP_575433.1 83299 D 323097 CDS YP_575434.1 92115705 4029649 complement(84211..86664) 1 NC_007964.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 86664 pheT 4029649 pheT Nitrobacter hamburgensis X14 phenylalanyl-tRNA synthetase subunit beta YP_575434.1 84211 R 323097 CDS YP_575435.1 92115706 4029650 complement(86661..87767) 1 NC_007964.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 87767 pheS 4029650 pheS Nitrobacter hamburgensis X14 phenylalanyl-tRNA synthetase subunit alpha YP_575435.1 86661 R 323097 CDS YP_575436.1 92115707 4029651 complement(87949..88308) 1 NC_007964.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 88308 rplT 4029651 rplT Nitrobacter hamburgensis X14 50S ribosomal protein L20 YP_575436.1 87949 R 323097 CDS YP_575437.1 92115708 4029652 complement(88378..88578) 1 NC_007964.1 50S ribosomal protein L35 88578 rpmI 4029652 rpmI Nitrobacter hamburgensis X14 50S ribosomal protein L35 YP_575437.1 88378 R 323097 CDS YP_575438.1 92115709 4029653 complement(88906..89421) 1 NC_007964.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 89421 infC 4029653 infC Nitrobacter hamburgensis X14 translation initiation factor IF-3 YP_575438.1 88906 R 323097 CDS YP_575439.1 92115710 4029654 89676..90449 1 NC_007964.1 hypothetical protein 90449 4029654 Nham_0078 Nitrobacter hamburgensis X14 hypothetical protein YP_575439.1 89676 D 323097 CDS YP_575440.1 92115711 4029617 complement(90511..92751) 1 NC_007964.1 hypothetical protein 92751 4029617 Nham_0079 Nitrobacter hamburgensis X14 hypothetical protein YP_575440.1 90511 R 323097 CDS YP_575441.1 92115712 4029618 complement(93054..94781) 1 NC_007964.1 PAS/PAC sensor protein 94781 4029618 Nham_0080 Nitrobacter hamburgensis X14 PAS/PAC sensor protein YP_575441.1 93054 R 323097 CDS YP_575442.1 92115713 4029620 95549..96481 1 NC_007964.1 thioredoxin-like protein 96481 4029620 Nham_0081 Nitrobacter hamburgensis X14 thioredoxin-like protein YP_575442.1 95549 D 323097 CDS YP_575443.1 92115714 4029621 96539..97213 1 NC_007964.1 peptidase S16, lon-like 97213 4029621 Nham_0082 Nitrobacter hamburgensis X14 peptidase S16, lon-like YP_575443.1 96539 D 323097 CDS YP_575444.1 92115715 4029622 97255..97452 1 NC_007964.1 hypothetical protein 97452 4029622 Nham_0083 Nitrobacter hamburgensis X14 hypothetical protein YP_575444.1 97255 D 323097 CDS YP_575445.1 92115716 4029623 complement(97735..99084) 1 NC_007964.1 ammonium transporter 99084 4029623 Nham_0084 Nitrobacter hamburgensis X14 ammonium transporter YP_575445.1 97735 R 323097 CDS YP_575446.1 92115717 4029624 complement(99122..99460) 1 NC_007964.1 nitrogen regulatory protein P-II 99460 4029624 Nham_0085 Nitrobacter hamburgensis X14 nitrogen regulatory protein P-II YP_575446.1 99122 R 323097 CDS YP_575447.1 92115718 4029625 complement(99872..100210) 1 NC_007964.1 nitrogen regulatory protein P-II 100210 4029625 Nham_0086 Nitrobacter hamburgensis X14 nitrogen regulatory protein P-II YP_575447.1 99872 R 323097 CDS YP_575448.1 92115719 4029626 complement(100358..101218) 1 NC_007964.1 acyl-CoA thioesterase II 101218 4029626 Nham_0087 Nitrobacter hamburgensis X14 acyl-CoA thioesterase II YP_575448.1 100358 R 323097 CDS YP_575449.1 92115720 4029627 101377..102597 1 NC_007964.1 2-octaprenyl-6-methoxyphenyl hydroxylase 102597 4029627 Nham_0088 Nitrobacter hamburgensis X14 2-octaprenyl-6-methoxyphenyl hydroxylase YP_575449.1 101377 D 323097 CDS YP_575450.1 92115721 4029628 102806..104077 1 NC_007964.1 class I and II aminotransferase 104077 4029628 Nham_0089 Nitrobacter hamburgensis X14 class I and II aminotransferase YP_575450.1 102806 D 323097 CDS YP_575451.1 92115722 4029629 104090..106597 1 NC_007964.1 cell division protein FtsK 106597 4029629 Nham_0090 Nitrobacter hamburgensis X14 cell division protein FtsK YP_575451.1 104090 D 323097 CDS YP_575452.1 92115723 4029630 106840..107859 1 NC_007964.1 outer membrane lipoprotein carrier protein LolA 107859 4029630 Nham_0091 Nitrobacter hamburgensis X14 outer membrane lipoprotein carrier protein LolA YP_575452.1 106840 D 323097 CDS YP_575453.1 92115724 4029631 107936..108817 1 NC_007964.1 exodeoxyribonuclease III (xth) 108817 4029631 Nham_0092 Nitrobacter hamburgensis X14 exodeoxyribonuclease III (xth) YP_575453.1 107936 D 323097 CDS YP_575454.1 92115725 4029632 complement(108887..109336) 1 NC_007964.1 cyclic nucleotide-binding domain-containing protein 109336 4029632 Nham_0093 Nitrobacter hamburgensis X14 cyclic nucleotide-binding domain-containing protein YP_575454.1 108887 R 323097 CDS YP_575455.1 92115726 4029633 complement(109421..110107) 1 NC_007964.1 two component transcriptional regulator 110107 4029633 Nham_0094 Nitrobacter hamburgensis X14 two component transcriptional regulator YP_575455.1 109421 R 323097 CDS YP_575456.1 92115727 4029634 110256..110897 1 NC_007964.1 hypothetical protein 110897 4029634 Nham_0095 Nitrobacter hamburgensis X14 hypothetical protein YP_575456.1 110256 D 323097 CDS YP_575457.1 92115728 4029635 complement(111017..111694) 1 NC_007964.1 hypothetical protein 111694 4029635 Nham_0096 Nitrobacter hamburgensis X14 hypothetical protein YP_575457.1 111017 R 323097 CDS YP_575458.1 92115729 4029598 complement(111728..112432) 1 NC_007964.1 glutathione S-transferase 112432 4029598 Nham_0097 Nitrobacter hamburgensis X14 glutathione S-transferase YP_575458.1 111728 R 323097 CDS YP_575459.1 92115730 4029599 112586..115222 1 NC_007964.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 115222 leuS 4029599 leuS Nitrobacter hamburgensis X14 leucyl-tRNA synthetase YP_575459.1 112586 D 323097 CDS YP_575460.1 92115731 4029600 115209..115793 1 NC_007964.1 hypothetical protein 115793 4029600 Nham_0099 Nitrobacter hamburgensis X14 hypothetical protein YP_575460.1 115209 D 323097 CDS YP_575461.1 92115732 4029601 115805..116833 1 NC_007964.1 required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 116833 holA 4029601 holA Nitrobacter hamburgensis X14 DNA polymerase III subunit delta YP_575461.1 115805 D 323097 CDS YP_575462.1 92115733 4029602 complement(117041..117328) 1 NC_007964.1 excinuclease ABC subunit C 117328 4029602 Nham_0101 Nitrobacter hamburgensis X14 excinuclease ABC subunit C YP_575462.1 117041 R 323097 CDS YP_575463.1 92115734 4029603 complement(117377..118261) 1 NC_007964.1 parB-like partition proteins 118261 4029603 Nham_0102 Nitrobacter hamburgensis X14 parB-like partition proteins YP_575463.1 117377 R 323097 CDS YP_575464.1 92115735 4029604 complement(118441..119301) 1 NC_007964.1 cobyrinic acid a,c-diamide synthase 119301 4029604 Nham_0103 Nitrobacter hamburgensis X14 cobyrinic acid a,c-diamide synthase YP_575464.1 118441 R 323097 CDS YP_575465.1 92115736 4029605 complement(119298..120080) 1 NC_007964.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 120080 gidB 4029605 gidB Nitrobacter hamburgensis X14 16S rRNA methyltransferase GidB YP_575465.1 119298 R 323097 CDS YP_575466.1 92115737 4029606 complement(120558..122432) 1 NC_007964.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 122432 4029606 Nham_0105 Nitrobacter hamburgensis X14 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_575466.1 120558 R 323097 CDS YP_575467.1 92115738 4029607 complement(122606..123979) 1 NC_007964.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 123979 trmE 4029607 trmE Nitrobacter hamburgensis X14 tRNA modification GTPase TrmE YP_575467.1 122606 R 323097 CDS YP_575468.1 92115739 4029608 124093..126141 1 NC_007964.1 hypothetical protein 126141 4029608 Nham_0107 Nitrobacter hamburgensis X14 hypothetical protein YP_575468.1 124093 D 323097 CDS YP_575469.1 92115740 4029609 complement(126334..127599) 1 NC_007964.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 127599 rho 4029609 rho Nitrobacter hamburgensis X14 transcription termination factor Rho YP_575469.1 126334 R 323097 CDS YP_575470.1 92115741 4029610 complement(127911..128942) 1 NC_007964.1 transposase IS116/IS110/IS902 128942 4029610 Nham_0109 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_575470.1 127911 R 323097 CDS YP_575471.1 92115742 4029611 129221..130444 1 NC_007964.1 transposase, mutator type 130444 4029611 Nham_0110 Nitrobacter hamburgensis X14 transposase, mutator type YP_575471.1 129221 D 323097 CDS YP_575472.1 92115743 4029612 complement(130647..131066) 1 NC_007964.1 hypothetical protein 131066 4029612 Nham_0111 Nitrobacter hamburgensis X14 hypothetical protein YP_575472.1 130647 R 323097 CDS YP_575473.1 92115744 4029613 131529..132371 1 NC_007964.1 hypothetical protein 132371 4029613 Nham_0112 Nitrobacter hamburgensis X14 hypothetical protein YP_575473.1 131529 D 323097 CDS YP_575474.1 92115745 4029614 132381..132989 1 NC_007964.1 maf protein 132989 4029614 Nham_0113 Nitrobacter hamburgensis X14 maf protein YP_575474.1 132381 D 323097 CDS YP_575475.1 92115746 4029615 133006..133605 1 NC_007964.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 133605 coaE 4029615 coaE Nitrobacter hamburgensis X14 dephospho-CoA kinase YP_575475.1 133006 D 323097 CDS YP_575476.1 92115747 4029616 133628..134347 1 NC_007964.1 DNA polymerase III subunit epsilon 134347 4029616 Nham_0115 Nitrobacter hamburgensis X14 DNA polymerase III subunit epsilon YP_575476.1 133628 D 323097 CDS YP_575477.1 92115748 4029558 complement(134447..134926) 1 NC_007964.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 134926 4029558 Nham_0116 Nitrobacter hamburgensis X14 preprotein translocase subunit SecB YP_575477.1 134447 R 323097 CDS YP_575478.1 92115749 4029559 135379..136083 1 NC_007964.1 import inner membrane translocase subunit Tim44 136083 4029559 Nham_0117 Nitrobacter hamburgensis X14 import inner membrane translocase subunit Tim44 YP_575478.1 135379 D 323097 CDS YP_575479.1 92115750 4029560 136094..137596 1 NC_007964.1 MltA 137596 4029560 Nham_0118 Nitrobacter hamburgensis X14 MltA YP_575479.1 136094 D 323097 CDS YP_575480.1 92115751 4029561 137593..138183 1 NC_007964.1 Smr protein/MutS2 138183 4029561 Nham_0119 Nitrobacter hamburgensis X14 Smr protein/MutS2 YP_575480.1 137593 D 323097 CDS YP_575481.1 92115752 4029562 complement(138299..139600) 1 NC_007964.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 139600 hslU 4029562 hslU Nitrobacter hamburgensis X14 ATP-dependent protease ATP-binding subunit HslU YP_575481.1 138299 R 323097 CDS YP_575482.1 92115753 4029563 complement(139683..140237) 1 NC_007964.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 140237 4029563 Nham_0121 Nitrobacter hamburgensis X14 ATP-dependent protease peptidase subunit YP_575482.1 139683 R 323097 CDS YP_575483.1 92115754 4029564 140506..141099 1 NC_007964.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 141099 hisB 4029564 hisB Nitrobacter hamburgensis X14 imidazoleglycerol-phosphate dehydratase YP_575483.1 140506 D 323097 CDS YP_575484.1 92115755 4029565 141126..141641 1 NC_007964.1 hypothetical protein 141641 4029565 Nham_0123 Nitrobacter hamburgensis X14 hypothetical protein YP_575484.1 141126 D 323097 CDS YP_575485.1 92115756 4029566 141638..142288 1 NC_007964.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 142288 hisH 4029566 hisH Nitrobacter hamburgensis X14 imidazole glycerol phosphate synthase subunit HisH YP_575485.1 141638 D 323097 CDS YP_575486.1 92115757 4029567 142285..143025 1 NC_007964.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 143025 4029567 Nham_0125 Nitrobacter hamburgensis X14 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_575486.1 142285 D 323097 CDS YP_575487.1 92115758 4029568 143041..143817 1 NC_007964.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 143817 4029568 Nham_0126 Nitrobacter hamburgensis X14 imidazole glycerol phosphate synthase subunit HisF YP_575487.1 143041 D 323097 CDS YP_575488.1 92115759 4029569 143899..144222 1 NC_007964.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 144222 hisE 4029569 hisE Nitrobacter hamburgensis X14 phosphoribosyl-ATP pyrophosphatase YP_575488.1 143899 D 323097 CDS YP_575489.1 92115760 4029570 144237..145193 1 NC_007964.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 145193 4029570 Nham_0128 Nitrobacter hamburgensis X14 pantothenate kinase YP_575489.1 144237 D 323097 CDS YP_575490.1 92115761 4029571 complement(145259..147517) 1 NC_007964.1 multi-sensor hybrid histidine kinase 147517 4029571 Nham_0129 Nitrobacter hamburgensis X14 multi-sensor hybrid histidine kinase YP_575490.1 145259 R 323097 CDS YP_575491.1 92115762 4029572 complement(147863..148759) 1 NC_007964.1 Mg chelatase-like protein 148759 4029572 Nham_0130 Nitrobacter hamburgensis X14 Mg chelatase-like protein YP_575491.1 147863 R 323097 CDS YP_575492.1 92115763 4029573 149040..149663 1 NC_007964.1 hypothetical protein 149663 4029573 Nham_0131 Nitrobacter hamburgensis X14 hypothetical protein YP_575492.1 149040 D 323097 CDS YP_575493.1 92115764 4029574 149698..150729 1 NC_007964.1 transposase IS116/IS110/IS902 150729 4029574 Nham_0132 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_575493.1 149698 D 323097 CDS YP_575494.1 92115765 4029575 151606..152184 1 NC_007964.1 hypothetical protein 152184 4029575 Nham_0133 Nitrobacter hamburgensis X14 hypothetical protein YP_575494.1 151606 D 323097 CDS YP_575495.1 92115766 4029576 complement(152663..153112) 1 NC_007964.1 hypothetical protein 153112 4029576 Nham_0134 Nitrobacter hamburgensis X14 hypothetical protein YP_575495.1 152663 R 323097 CDS YP_575496.1 92115767 4029577 complement(153109..153447) 1 NC_007964.1 hypothetical protein 153447 4029577 Nham_0135 Nitrobacter hamburgensis X14 hypothetical protein YP_575496.1 153109 R 323097 CDS YP_575497.1 92115768 4029445 complement(153447..155741) 1 NC_007964.1 hypothetical protein 155741 4029445 Nham_0136 Nitrobacter hamburgensis X14 hypothetical protein YP_575497.1 153447 R 323097 CDS YP_575498.1 92115769 4029446 complement(155738..156100) 1 NC_007964.1 hypothetical protein 156100 4029446 Nham_0137 Nitrobacter hamburgensis X14 hypothetical protein YP_575498.1 155738 R 323097 CDS YP_575499.1 92115770 4029447 complement(156339..156626) 1 NC_007964.1 hypothetical protein 156626 4029447 Nham_0138 Nitrobacter hamburgensis X14 hypothetical protein YP_575499.1 156339 R 323097 CDS YP_575500.1 92115771 4029448 complement(156793..158691) 1 NC_007964.1 hypothetical protein 158691 4029448 Nham_0139 Nitrobacter hamburgensis X14 hypothetical protein YP_575500.1 156793 R 323097 CDS YP_575501.1 92115772 4029449 complement(158977..160173) 1 NC_007964.1 hypothetical protein 160173 4029449 Nham_0140 Nitrobacter hamburgensis X14 hypothetical protein YP_575501.1 158977 R 323097 CDS YP_575502.1 92115773 4029450 complement(160184..160771) 1 NC_007964.1 hypothetical protein 160771 4029450 Nham_0141 Nitrobacter hamburgensis X14 hypothetical protein YP_575502.1 160184 R 323097 CDS YP_575503.1 92115774 4029451 complement(160829..161731) 1 NC_007964.1 hypothetical protein 161731 4029451 Nham_0142 Nitrobacter hamburgensis X14 hypothetical protein YP_575503.1 160829 R 323097 CDS YP_575504.1 92115775 4029452 complement(161894..163591) 1 NC_007964.1 recombinase 163591 4029452 Nham_0143 Nitrobacter hamburgensis X14 recombinase YP_575504.1 161894 R 323097 CDS YP_575505.1 92115776 4029453 complement(163628..164275) 1 NC_007964.1 Mg chelatase-like protein 164275 4029453 Nham_0144 Nitrobacter hamburgensis X14 Mg chelatase-like protein YP_575505.1 163628 R 323097 CDS YP_575506.1 92115777 4029454 complement(164375..165316) 1 NC_007964.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 165316 4029454 Nham_0145 Nitrobacter hamburgensis X14 glutathione synthetase YP_575506.1 164375 R 323097 CDS YP_575507.1 92115778 4029455 complement(165366..165773) 1 NC_007964.1 hypothetical protein 165773 4029455 Nham_0146 Nitrobacter hamburgensis X14 hypothetical protein YP_575507.1 165366 R 323097 CDS YP_575508.1 92115779 4029456 complement(165770..166714) 1 NC_007964.1 hypothetical protein 166714 4029456 Nham_0147 Nitrobacter hamburgensis X14 hypothetical protein YP_575508.1 165770 R 323097 CDS YP_575509.1 92115780 4029457 167003..168214 1 NC_007964.1 extracellular ligand-binding receptor 168214 4029457 Nham_0148 Nitrobacter hamburgensis X14 extracellular ligand-binding receptor YP_575509.1 167003 D 323097 CDS YP_575510.1 92115781 4029458 complement(168230..169390) 1 NC_007964.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 169390 4029458 Nham_0149 Nitrobacter hamburgensis X14 coproporphyrinogen III oxidase YP_575510.1 168230 R 323097 CDS YP_575511.1 92115782 4029459 complement(169377..170012) 1 NC_007964.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 170012 4029459 Nham_0150 Nitrobacter hamburgensis X14 deoxyribonucleotide triphosphate pyrophosphatase YP_575511.1 169377 R 323097 CDS YP_575512.1 92115783 4029460 complement(170161..170874) 1 NC_007964.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 170874 rph 4029460 rph Nitrobacter hamburgensis X14 ribonuclease PH YP_575512.1 170161 R 323097 CDS YP_575513.1 92115784 4029461 171055..172143 1 NC_007964.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 172143 hrcA 4029461 hrcA Nitrobacter hamburgensis X14 heat-inducible transcription repressor YP_575513.1 171055 D 323097 CDS YP_575514.1 92115785 4029462 172225..172836 1 NC_007964.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 172836 4029462 Nham_0153 Nitrobacter hamburgensis X14 heat shock protein GrpE YP_575514.1 172225 D 323097 CDS YP_575515.1 92115786 4029463 complement(173001..173939) 1 NC_007964.1 hypothetical protein 173939 4029463 Nham_0154 Nitrobacter hamburgensis X14 hypothetical protein YP_575515.1 173001 R 323097 CDS YP_575516.1 92115787 4029311 174596..176494 1 NC_007964.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 176494 dnaK 4029311 dnaK Nitrobacter hamburgensis X14 molecular chaperone DnaK YP_575516.1 174596 D 323097 CDS YP_575517.1 92115788 4029312 176650..177783 1 NC_007964.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 177783 4029312 Nham_0156 Nitrobacter hamburgensis X14 chaperone protein DnaJ YP_575517.1 176650 D 323097 CDS YP_575518.1 92115789 4029313 177877..178479 1 NC_007964.1 ribosomal RNA adenine methylase transferase 178479 4029313 Nham_0157 Nitrobacter hamburgensis X14 ribosomal RNA adenine methylase transferase YP_575518.1 177877 D 323097 CDS YP_575519.1 92115790 4029314 178829..179698 1 NC_007964.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 179698 4029314 Nham_0158 Nitrobacter hamburgensis X14 dihydrodipicolinate reductase YP_575519.1 178829 D 323097 CDS YP_575520.1 92115791 4029315 179740..180363 1 NC_007964.1 catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 180363 4029315 Nham_0159 Nitrobacter hamburgensis X14 phosphoglyceromutase YP_575520.1 179740 D 323097 CDS YP_575521.1 92115792 4029316 complement(180499..181443) 1 NC_007964.1 AraC family transcriptional regulator 181443 4029316 Nham_0160 Nitrobacter hamburgensis X14 AraC family transcriptional regulator YP_575521.1 180499 R 323097 CDS YP_575522.1 92115793 4029317 complement(181569..182093) 1 NC_007964.1 hypothetical protein 182093 4029317 Nham_0161 Nitrobacter hamburgensis X14 hypothetical protein YP_575522.1 181569 R 323097 CDS YP_575523.1 92115794 4029318 182236..183024 1 NC_007964.1 endonuclease III 183024 4029318 Nham_0162 Nitrobacter hamburgensis X14 endonuclease III YP_575523.1 182236 D 323097 CDS YP_575524.1 92115795 4029319 complement(183215..184915) 1 NC_007964.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 184915 rpsA 4029319 rpsA Nitrobacter hamburgensis X14 30S ribosomal protein S1 YP_575524.1 183215 R 323097 CDS YP_575525.1 92115796 4029320 complement(185323..185952) 1 NC_007964.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 185952 cmk 4029320 cmk Nitrobacter hamburgensis X14 cytidylate kinase YP_575525.1 185323 R 323097 CDS YP_575526.1 92115797 4029321 complement(185949..187298) 1 NC_007964.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 187298 4029321 Nham_0165 Nitrobacter hamburgensis X14 3-phosphoshikimate 1-carboxyvinyltransferase YP_575526.1 185949 R 323097 CDS YP_575527.1 92115798 4029322 187444..187857 1 NC_007964.1 hypothetical protein 187857 4029322 Nham_0166 Nitrobacter hamburgensis X14 hypothetical protein YP_575527.1 187444 D 323097 CDS YP_575528.1 92115799 4029324 188426..188857 1 NC_007964.1 heat shock protein Hsp20 188857 4029324 Nham_0167 Nitrobacter hamburgensis X14 heat shock protein Hsp20 YP_575528.1 188426 D 323097 CDS YP_575529.1 92115800 4029325 188963..189229 1 NC_007964.1 hypothetical protein 189229 4029325 Nham_0168 Nitrobacter hamburgensis X14 hypothetical protein YP_575529.1 188963 D 323097 CDS YP_575530.1 92115801 4029326 189495..191336 1 NC_007964.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 191336 4029326 Nham_0169 Nitrobacter hamburgensis X14 dihydroxy-acid dehydratase YP_575530.1 189495 D 323097 CDS YP_575531.1 92115802 4029327 complement(191721..192119) 1 NC_007964.1 hypothetical protein 192119 4029327 Nham_0170 Nitrobacter hamburgensis X14 hypothetical protein YP_575531.1 191721 R 323097 CDS YP_575532.1 92115803 4029328 complement(192484..192945) 1 NC_007964.1 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 192945 4029328 Nham_0171 Nitrobacter hamburgensis X14 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_575532.1 192484 R 323097 CDS YP_575533.1 92115804 4029329 complement(193196..193792) 1 NC_007964.1 sigma 54 modulation protein/ribosomal protein S30EA 193792 4029329 Nham_0172 Nitrobacter hamburgensis X14 sigma 54 modulation protein/ribosomal protein S30EA YP_575533.1 193196 R 323097 CDS YP_575534.1 92115805 4030766 complement(193849..195489) 1 NC_007964.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 195489 4030766 Nham_0173 Nitrobacter hamburgensis X14 RNA polymerase factor sigma-54 YP_575534.1 193849 R 323097 CDS YP_575535.1 92115806 4030767 complement(195721..196104) 1 NC_007964.1 hypothetical protein 196104 4030767 Nham_0174 Nitrobacter hamburgensis X14 hypothetical protein YP_575535.1 195721 R 323097 CDS YP_575536.1 92115807 4030768 196228..196590 1 NC_007964.1 hypothetical protein 196590 4030768 Nham_0175 Nitrobacter hamburgensis X14 hypothetical protein YP_575536.1 196228 D 323097 CDS YP_575537.1 92115808 4030769 complement(196682..197683) 1 NC_007964.1 ABC transporter 197683 4030769 Nham_0176 Nitrobacter hamburgensis X14 ABC transporter YP_575537.1 196682 R 323097 CDS YP_575538.1 92115809 4030770 complement(197904..198590) 1 NC_007964.1 OstA-like protein 198590 4030770 Nham_0177 Nitrobacter hamburgensis X14 OstA-like protein YP_575538.1 197904 R 323097 CDS YP_575539.1 92115810 4030771 complement(198587..199363) 1 NC_007964.1 hypothetical protein 199363 4030771 Nham_0178 Nitrobacter hamburgensis X14 hypothetical protein YP_575539.1 198587 R 323097 CDS YP_575540.1 92115811 4030772 complement(199614..200234) 1 NC_007964.1 3'-5' exonuclease 200234 4030772 Nham_0179 Nitrobacter hamburgensis X14 3'-5' exonuclease YP_575540.1 199614 R 323097 CDS YP_575541.1 92115812 4030773 200513..201277 1 NC_007964.1 hypothetical protein 201277 4030773 Nham_0180 Nitrobacter hamburgensis X14 hypothetical protein YP_575541.1 200513 D 323097 CDS YP_575542.1 92115813 4030774 complement(201529..202158) 1 NC_007964.1 hypothetical protein 202158 4030774 Nham_0181 Nitrobacter hamburgensis X14 hypothetical protein YP_575542.1 201529 R 323097 CDS YP_575543.1 92115814 4030775 202247..202450 1 NC_007964.1 hypothetical protein 202450 4030775 Nham_0182 Nitrobacter hamburgensis X14 hypothetical protein YP_575543.1 202247 D 323097 CDS YP_575544.1 92115815 4030777 203006..203974 1 NC_007964.1 NAD-dependent epimerase/dehydratase 203974 4030777 Nham_0183 Nitrobacter hamburgensis X14 NAD-dependent epimerase/dehydratase YP_575544.1 203006 D 323097 CDS YP_575545.1 92115816 4030778 complement(204018..204824) 1 NC_007964.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters UDP disphosphate which reduces the pool of lipid carrier available to the cell; UDP pyrophosphate phosphatase 204824 4030778 Nham_0184 Nitrobacter hamburgensis X14 UDP pyrophosphate phosphatase YP_575545.1 204018 R 323097 CDS YP_575546.1 92115817 4030779 205005..205697 1 NC_007964.1 glutathione S-transferase 205697 4030779 Nham_0185 Nitrobacter hamburgensis X14 glutathione S-transferase YP_575546.1 205005 D 323097 CDS YP_575547.1 92115818 4030780 complement(205913..206833) 1 NC_007964.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 206833 4030780 Nham_0186 Nitrobacter hamburgensis X14 2-dehydropantoate 2-reductase YP_575547.1 205913 R 323097 CDS YP_575548.1 92115819 4030781 complement(206930..208279) 1 NC_007964.1 MATE efflux family protein 208279 4030781 Nham_0187 Nitrobacter hamburgensis X14 MATE efflux family protein YP_575548.1 206930 R 323097 CDS YP_575549.1 92115820 4030782 complement(208502..209083) 1 NC_007964.1 hypothetical protein 209083 4030782 Nham_0188 Nitrobacter hamburgensis X14 hypothetical protein YP_575549.1 208502 R 323097 CDS YP_575550.1 92115821 4030783 209445..210620 1 NC_007964.1 hypothetical protein 210620 4030783 Nham_0189 Nitrobacter hamburgensis X14 hypothetical protein YP_575550.1 209445 D 323097 CDS YP_575551.1 92115822 4030650 complement(210726..211865) 1 NC_007964.1 hypothetical protein 211865 4030650 Nham_0190 Nitrobacter hamburgensis X14 hypothetical protein YP_575551.1 210726 R 323097 CDS YP_575552.1 92115823 4030651 complement(212055..213800) 1 NC_007964.1 gamma-glutamyltransferase 213800 4030651 Nham_0191 Nitrobacter hamburgensis X14 gamma-glutamyltransferase YP_575552.1 212055 R 323097 CDS YP_575553.1 92115824 4030652 213912..215321 1 NC_007964.1 major facilitator transporter 215321 4030652 Nham_0192 Nitrobacter hamburgensis X14 major facilitator transporter YP_575553.1 213912 D 323097 CDS YP_575554.1 92115825 4030653 complement(215345..216328) 1 NC_007964.1 cytochrome c, class I 216328 4030653 Nham_0193 Nitrobacter hamburgensis X14 cytochrome c, class I YP_575554.1 215345 R 323097 CDS YP_575555.1 92115826 4030654 complement(216325..216987) 1 NC_007964.1 cytochrome c, class I 216987 4030654 Nham_0194 Nitrobacter hamburgensis X14 cytochrome c, class I YP_575555.1 216325 R 323097 CDS YP_575556.1 92115827 4030655 complement(217228..218820) 1 NC_007964.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 218820 purH 4030655 purH Nitrobacter hamburgensis X14 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_575556.1 217228 R 323097 CDS YP_575557.1 92115828 4030656 complement(218922..220676) 1 NC_007964.1 heparinase II/III-like 220676 4030656 Nham_0196 Nitrobacter hamburgensis X14 heparinase II/III-like YP_575557.1 218922 R 323097 CDS YP_575558.1 92115829 4030657 complement(220814..222166) 1 NC_007964.1 hypothetical protein 222166 4030657 Nham_0197 Nitrobacter hamburgensis X14 hypothetical protein YP_575558.1 220814 R 323097 CDS YP_575559.1 92115830 4030658 222371..222589 1 NC_007964.1 hypothetical protein 222589 4030658 Nham_0198 Nitrobacter hamburgensis X14 hypothetical protein YP_575559.1 222371 D 323097 CDS YP_575560.1 92115831 4030660 complement(223410..223928) 1 NC_007964.1 ErfK/YbiS/YcfS/YnhG 223928 4030660 Nham_0200 Nitrobacter hamburgensis X14 ErfK/YbiS/YcfS/YnhG YP_575560.1 223410 R 323097 CDS YP_575561.1 92115832 4030661 complement(224147..225778) 1 NC_007964.1 class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine; lysyl-tRNA synthetase 225778 lysK 4030661 lysK Nitrobacter hamburgensis X14 lysyl-tRNA synthetase YP_575561.1 224147 R 323097 CDS YP_575562.1 92115833 4030662 complement(225903..226823) 1 NC_007964.1 extracellular solute-binding protein 226823 4030662 Nham_0202 Nitrobacter hamburgensis X14 extracellular solute-binding protein YP_575562.1 225903 R 323097 CDS YP_575563.1 92115834 4030663 226878..228275 1 NC_007964.1 glycosyl transferase family protein 228275 4030663 Nham_0203 Nitrobacter hamburgensis X14 glycosyl transferase family protein YP_575563.1 226878 D 323097 CDS YP_575564.1 92115835 4030664 228332..228793 1 NC_007964.1 hypothetical protein 228793 4030664 Nham_0204 Nitrobacter hamburgensis X14 hypothetical protein YP_575564.1 228332 D 323097 CDS YP_575565.1 92115836 4030665 229256..229846 1 NC_007964.1 hypothetical protein 229846 4030665 Nham_0205 Nitrobacter hamburgensis X14 hypothetical protein YP_575565.1 229256 D 323097 CDS YP_575566.1 92115837 4030666 complement(229843..230832) 1 NC_007964.1 transposase 230832 4030666 Nham_0206 Nitrobacter hamburgensis X14 transposase YP_575566.1 229843 R 323097 CDS YP_575567.1 92115838 4030667 230911..231138 1 NC_007964.1 XRE family transcriptional regulator 231138 4030667 Nham_0207 Nitrobacter hamburgensis X14 XRE family transcriptional regulator YP_575567.1 230911 D 323097 CDS YP_575568.1 92115839 4030668 complement(231400..231999) 1 NC_007964.1 hypothetical protein 231999 4030668 Nham_0208 Nitrobacter hamburgensis X14 hypothetical protein YP_575568.1 231400 R 323097 CDS YP_575569.1 92115840 4030669 232194..232853 1 NC_007964.1 glycosyl transferase 232853 4030669 Nham_0209 Nitrobacter hamburgensis X14 glycosyl transferase YP_575569.1 232194 D 323097 CDS YP_575570.1 92115841 4030803 complement(232844..233437) 1 NC_007964.1 electron transport protein SCO1/SenC 233437 4030803 Nham_0210 Nitrobacter hamburgensis X14 electron transport protein SCO1/SenC YP_575570.1 232844 R 323097 CDS YP_575571.1 92115842 4030804 complement(233504..233677) 1 NC_007964.1 hypothetical protein 233677 4030804 Nham_0211 Nitrobacter hamburgensis X14 hypothetical protein YP_575571.1 233504 R 323097 CDS YP_575572.1 92115843 4030805 complement(233839..234294) 1 NC_007964.1 hypothetical protein 234294 4030805 Nham_0212 Nitrobacter hamburgensis X14 hypothetical protein YP_575572.1 233839 R 323097 CDS YP_575573.1 92115844 4030806 234563..235255 1 NC_007964.1 member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 235255 4030806 Nham_0213 Nitrobacter hamburgensis X14 RNA polymerase sigma factor YP_575573.1 234563 D 323097 CDS YP_575574.1 92115845 4030807 235351..235875 1 NC_007964.1 hypothetical protein 235875 4030807 Nham_0214 Nitrobacter hamburgensis X14 hypothetical protein YP_575574.1 235351 D 323097 CDS YP_575575.1 92115846 4030808 235886..236227 1 NC_007964.1 amicyanin precursor protein 236227 4030808 Nham_0215 Nitrobacter hamburgensis X14 amicyanin precursor protein YP_575575.1 235886 D 323097 CDS YP_575576.1 92115847 4030809 complement(236253..236825) 1 NC_007964.1 hypothetical protein 236825 4030809 Nham_0216 Nitrobacter hamburgensis X14 hypothetical protein YP_575576.1 236253 R 323097 CDS YP_575577.1 92115848 4030811 complement(237035..237439) 1 NC_007964.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 237439 4030811 Nham_0217 Nitrobacter hamburgensis X14 camphor resistance protein CrcB YP_575577.1 237035 R 323097 CDS YP_575578.1 92115849 4030812 complement(238066..239172) 1 NC_007964.1 Catalyzes the deamination of dCTP to form dUTP; 2'-deoxycytidine 5'-triphosphate deaminase 239172 4030812 Nham_0218 Nitrobacter hamburgensis X14 2'-deoxycytidine 5'-triphosphate deaminase YP_575578.1 238066 R 323097 CDS YP_575579.1 92115850 4030813 239411..240679 1 NC_007964.1 catalyzes the conversion of O-succinylhomoserine and sulfide to homocysteine; second step in methionine biosynthesis; O-succinylhomoserine sulfhydrylase 240679 4030813 Nham_0219 Nitrobacter hamburgensis X14 O-succinylhomoserine sulfhydrylase YP_575579.1 239411 D 323097 CDS YP_575580.1 92115851 4030814 complement(240783..241766) 1 NC_007964.1 lipolytic enzyme, G-D-S-L 241766 4030814 Nham_0220 Nitrobacter hamburgensis X14 lipolytic enzyme, G-D-S-L YP_575580.1 240783 R 323097 CDS YP_575581.1 92115852 4030815 complement(241766..242527) 1 NC_007964.1 hypothetical protein 242527 4030815 Nham_0221 Nitrobacter hamburgensis X14 hypothetical protein YP_575581.1 241766 R 323097 CDS YP_575582.1 92115853 4030816 complement(242524..243759) 1 NC_007964.1 acyltransferase 3 243759 4030816 Nham_0222 Nitrobacter hamburgensis X14 acyltransferase 3 YP_575582.1 242524 R 323097 CDS YP_575583.1 92115854 4030817 243972..244490 1 NC_007964.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 244490 apaG 4030817 apaG Nitrobacter hamburgensis X14 ApaG protein YP_575583.1 243972 D 323097 CDS YP_575584.1 92115855 4030818 complement(244525..245532) 1 NC_007964.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 245532 hslO 4030818 hslO Nitrobacter hamburgensis X14 Hsp33-like chaperonin YP_575584.1 244525 R 323097 CDS YP_575585.1 92115856 4030819 complement(245648..246157) 1 NC_007964.1 OsmC-like protein 246157 4030819 Nham_0225 Nitrobacter hamburgensis X14 OsmC-like protein YP_575585.1 245648 R 323097 CDS YP_575586.1 92115857 4030820 246434..249229 1 NC_007964.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 249229 4030820 Nham_0226 Nitrobacter hamburgensis X14 PII uridylyl-transferase YP_575586.1 246434 D 323097 CDS YP_575587.1 92115858 4029998 249672..251870 1 NC_007964.1 penicillin-binding protein 1A 251870 4029998 Nham_0227 Nitrobacter hamburgensis X14 penicillin-binding protein 1A YP_575587.1 249672 D 323097 CDS YP_575588.1 92115859 4029999 complement(252028..252864) 1 NC_007964.1 hypothetical protein 252864 4029999 Nham_0228 Nitrobacter hamburgensis X14 hypothetical protein YP_575588.1 252028 R 323097 CDS YP_575589.1 92115860 4030000 complement(253067..254401) 1 NC_007964.1 polyhydroxyalkanoate depolymerase 254401 4030000 Nham_0229 Nitrobacter hamburgensis X14 polyhydroxyalkanoate depolymerase YP_575589.1 253067 R 323097 CDS YP_575590.1 92115861 4030001 254849..256243 1 NC_007964.1 sensor signal transduction histidine kinase 256243 4030001 Nham_0230 Nitrobacter hamburgensis X14 sensor signal transduction histidine kinase YP_575590.1 254849 D 323097 CDS YP_575591.1 92115862 4030002 256335..256889 1 NC_007964.1 response regulator receiver domain-containing protein 256889 4030002 Nham_0231 Nitrobacter hamburgensis X14 response regulator receiver domain-containing protein YP_575591.1 256335 D 323097 CDS YP_575592.1 92115863 4030003 complement(256918..257409) 1 NC_007964.1 hypothetical protein 257409 4030003 Nham_0232 Nitrobacter hamburgensis X14 hypothetical protein YP_575592.1 256918 R 323097 CDS YP_575593.1 92115864 4030004 257533..258225 1 NC_007964.1 beta-lactamase-like 258225 4030004 Nham_0233 Nitrobacter hamburgensis X14 beta-lactamase-like YP_575593.1 257533 D 323097 CDS YP_575594.1 92115865 4030005 complement(258295..258711) 1 NC_007964.1 hypothetical protein 258711 4030005 Nham_0234 Nitrobacter hamburgensis X14 hypothetical protein YP_575594.1 258295 R 323097 CDS YP_575595.1 92115866 4030006 complement(258873..261698) 1 NC_007964.1 PAS/PAC sensor hybrid histidine kinase 261698 4030006 Nham_0235 Nitrobacter hamburgensis X14 PAS/PAC sensor hybrid histidine kinase YP_575595.1 258873 R 323097 CDS YP_575596.1 92115867 4030007 complement(261958..262962) 1 NC_007964.1 OmpA/MotB 262962 4030007 Nham_0236 Nitrobacter hamburgensis X14 OmpA/MotB YP_575596.1 261958 R 323097 CDS YP_575597.1 92115868 4030008 complement(263148..264071) 1 NC_007964.1 metalloprotease; heat shock protein HtpX 264071 4030008 Nham_0237 Nitrobacter hamburgensis X14 heat shock protein HtpX YP_575597.1 263148 R 323097 CDS YP_575598.1 92115869 4030009 complement(264185..264736) 1 NC_007964.1 N-acetyltransferase GCN5 264736 4030009 Nham_0238 Nitrobacter hamburgensis X14 N-acetyltransferase GCN5 YP_575598.1 264185 R 323097 CDS YP_575599.1 92115870 4030010 complement(264818..266176) 1 NC_007964.1 outer membrane protein 266176 4030010 Nham_0239 Nitrobacter hamburgensis X14 outer membrane protein YP_575599.1 264818 R 323097 CDS YP_575600.1 92115871 4030011 266479..269040 1 NC_007964.1 DEAD/DEAH box helicase 269040 4030011 Nham_0240 Nitrobacter hamburgensis X14 DEAD/DEAH box helicase YP_575600.1 266479 D 323097 CDS YP_575601.1 92115872 4030012 269081..269776 1 NC_007964.1 metallophosphoesterase 269776 4030012 Nham_0241 Nitrobacter hamburgensis X14 metallophosphoesterase YP_575601.1 269081 D 323097 CDS YP_575602.1 92115873 4030013 complement(269777..270640) 1 NC_007964.1 LysR family transcriptional regulator 270640 4030013 Nham_0242 Nitrobacter hamburgensis X14 LysR family transcriptional regulator YP_575602.1 269777 R 323097 CDS YP_575603.1 92115874 4030014 270738..271676 1 NC_007964.1 hypothetical protein 271676 4030014 Nham_0243 Nitrobacter hamburgensis X14 hypothetical protein YP_575603.1 270738 D 323097 CDS YP_575604.1 92115875 4030015 complement(271734..272531) 1 NC_007964.1 hypothetical protein 272531 4030015 Nham_0244 Nitrobacter hamburgensis X14 hypothetical protein YP_575604.1 271734 R 323097 CDS YP_575605.1 92115876 4030016 complement(272528..273454) 1 NC_007964.1 hypothetical protein 273454 4030016 Nham_0245 Nitrobacter hamburgensis X14 hypothetical protein YP_575605.1 272528 R 323097 CDS YP_575606.1 92115877 4030017 complement(273863..274588) 1 NC_007964.1 transposase, IS4 274588 4030017 Nham_0246 Nitrobacter hamburgensis X14 transposase, IS4 YP_575606.1 273863 R 323097 CDS YP_575607.1 92115878 4030995 complement(274623..274973) 1 NC_007964.1 ISGsu3, transposase 274973 4030995 Nham_0247 Nitrobacter hamburgensis X14 ISGsu3, transposase YP_575607.1 274623 R 323097 CDS YP_575608.1 92115879 4030996 complement(275056..278316) 1 NC_007964.1 Sel1-like protein 278316 4030996 Nham_0248 Nitrobacter hamburgensis X14 Sel1-like protein YP_575608.1 275056 R 323097 CDS YP_575609.1 92115880 4030997 278750..279238 1 NC_007964.1 MarR family transcriptional regulator 279238 4030997 Nham_0249 Nitrobacter hamburgensis X14 MarR family transcriptional regulator YP_575609.1 278750 D 323097 CDS YP_575610.1 92115881 4030998 279339..280709 1 NC_007964.1 glutamate--cysteine ligase 280709 4030998 Nham_0250 Nitrobacter hamburgensis X14 glutamate--cysteine ligase YP_575610.1 279339 D 323097 CDS YP_575611.1 92115882 4030999 280821..281438 1 NC_007964.1 hypothetical protein 281438 4030999 Nham_0251 Nitrobacter hamburgensis X14 hypothetical protein YP_575611.1 280821 D 323097 CDS YP_575612.1 92115883 4031000 complement(281663..282430) 1 NC_007964.1 peptidase S26A, signal peptidase I 282430 4031000 Nham_0252 Nitrobacter hamburgensis X14 peptidase S26A, signal peptidase I YP_575612.1 281663 R 323097 CDS YP_575613.1 92115884 4031001 complement(282427..283854) 1 NC_007964.1 C69 family peptidase 283854 4031001 Nham_0253 Nitrobacter hamburgensis X14 C69 family peptidase YP_575613.1 282427 R 323097 CDS YP_575614.1 92115885 4031002 complement(284077..284637) 1 NC_007964.1 invasion associated locus B 284637 4031002 Nham_0254 Nitrobacter hamburgensis X14 invasion associated locus B YP_575614.1 284077 R 323097 CDS YP_575615.1 92115886 4031003 285079..285936 1 NC_007964.1 cytochrome-c oxidase 285936 4031003 Nham_0255 Nitrobacter hamburgensis X14 cytochrome-c oxidase YP_575615.1 285079 D 323097 CDS YP_575616.1 92115887 4031004 286019..287632 1 NC_007964.1 cytochrome-c oxidase 287632 4031004 Nham_0256 Nitrobacter hamburgensis X14 cytochrome-c oxidase YP_575616.1 286019 D 323097 CDS YP_575617.1 92115888 4031005 287696..288682 1 NC_007964.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 288682 4031005 Nham_0257 Nitrobacter hamburgensis X14 protoheme IX farnesyltransferase YP_575617.1 287696 D 323097 CDS YP_575618.1 92115889 4031006 288699..288863 1 NC_007964.1 CoxF protein 288863 4031006 Nham_0258 Nitrobacter hamburgensis X14 CoxF protein YP_575618.1 288699 D 323097 CDS YP_575619.1 92115890 4031007 288869..289519 1 NC_007964.1 involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 289519 4031007 Nham_0259 Nitrobacter hamburgensis X14 cytochrome C oxidase assembly protein YP_575619.1 288869 D 323097 CDS YP_575620.1 92115891 4031008 289622..290476 1 NC_007964.1 cytochrome c oxidase subunit III 290476 4031008 Nham_0260 Nitrobacter hamburgensis X14 cytochrome c oxidase subunit III YP_575620.1 289622 D 323097 CDS YP_575621.1 92115892 4031009 290551..290940 1 NC_007964.1 hypothetical protein 290940 4031009 Nham_0261 Nitrobacter hamburgensis X14 hypothetical protein YP_575621.1 290551 D 323097 CDS YP_575622.1 92115893 4031010 291372..292790 1 NC_007964.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 292790 4031010 Nham_0262 Nitrobacter hamburgensis X14 threonine synthase YP_575622.1 291372 D 323097 CDS YP_575623.1 92115894 4031011 292787..294076 1 NC_007964.1 peptidase M16-like protein 294076 4031011 Nham_0263 Nitrobacter hamburgensis X14 peptidase M16-like protein YP_575623.1 292787 D 323097 CDS YP_575624.1 92115895 4031012 294254..294838 1 NC_007964.1 N-acetyltransferase GCN5 294838 4031012 Nham_0264 Nitrobacter hamburgensis X14 N-acetyltransferase GCN5 YP_575624.1 294254 D 323097 CDS YP_575625.1 92115896 4031013 294997..295683 1 NC_007964.1 hypothetical protein 295683 4031013 Nham_0265 Nitrobacter hamburgensis X14 hypothetical protein YP_575625.1 294997 D 323097 CDS YP_575626.1 92115897 4031146 complement(295916..296401) 1 NC_007964.1 H+-transporting two-sector ATPase subunit B/B' 296401 4031146 Nham_0266 Nitrobacter hamburgensis X14 H+-transporting two-sector ATPase subunit B/B' YP_575626.1 295916 R 323097 CDS YP_575627.1 92115898 4031147 complement(296409..296966) 1 NC_007964.1 H+-transporting two-sector ATPase subunit B/B' 296966 4031147 Nham_0267 Nitrobacter hamburgensis X14 H+-transporting two-sector ATPase subunit B/B' YP_575627.1 296409 R 323097 CDS YP_575628.1 92115899 4031148 complement(297030..297257) 1 NC_007964.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 297257 4031148 Nham_0268 Nitrobacter hamburgensis X14 F0F1 ATP synthase subunit C YP_575628.1 297030 R 323097 CDS YP_575629.1 92115900 4031149 complement(297316..298059) 1 NC_007964.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 298059 4031149 Nham_0269 Nitrobacter hamburgensis X14 F0F1 ATP synthase subunit A YP_575629.1 297316 R 323097 CDS YP_575630.1 92115901 4031150 complement(298127..298510) 1 NC_007964.1 FoF1 ATP synthase subunit I 298510 4031150 Nham_0270 Nitrobacter hamburgensis X14 FoF1 ATP synthase subunit I YP_575630.1 298127 R 323097 CDS YP_575631.1 92115902 4031151 299075..299629 1 NC_007964.1 hypothetical protein 299629 4031151 Nham_0271 Nitrobacter hamburgensis X14 hypothetical protein YP_575631.1 299075 D 323097 CDS YP_575632.1 92115903 4031152 299819..300235 1 NC_007964.1 hypothetical protein 300235 4031152 Nham_0272 Nitrobacter hamburgensis X14 hypothetical protein YP_575632.1 299819 D 323097 CDS YP_575633.1 92115904 4031153 300484..301179 1 NC_007964.1 two component LuxR family transcriptional regulator 301179 4031153 Nham_0273 Nitrobacter hamburgensis X14 two component LuxR family transcriptional regulator YP_575633.1 300484 D 323097 CDS YP_575634.1 92115905 4031154 complement(301267..304776) 1 NC_007964.1 periplasmic sensor hybrid histidine kinase 304776 4031154 Nham_0274 Nitrobacter hamburgensis X14 periplasmic sensor hybrid histidine kinase YP_575634.1 301267 R 323097 CDS YP_575635.1 92115906 4031156 complement(305768..306997) 1 NC_007964.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 306997 4031156 Nham_0276 Nitrobacter hamburgensis X14 5-aminolevulinate synthase YP_575635.1 305768 R 323097 CDS YP_575636.1 92115907 4031157 complement(307289..308311) 1 NC_007964.1 biotin synthase 308311 4031157 Nham_0277 Nitrobacter hamburgensis X14 biotin synthase YP_575636.1 307289 R 323097 CDS YP_575637.1 92115908 4031158 complement(308769..309506) 1 NC_007964.1 OmpA-like transmembrane region 309506 4031158 Nham_0278 Nitrobacter hamburgensis X14 OmpA-like transmembrane region YP_575637.1 308769 R 323097 CDS YP_575638.1 92115909 4031160 complement(311426..311668) 1 NC_007964.1 hypothetical protein 311668 4031160 Nham_0280 Nitrobacter hamburgensis X14 hypothetical protein YP_575638.1 311426 R 323097 CDS YP_575639.1 92115910 4031161 311997..312251 1 NC_007964.1 hypothetical protein 312251 4031161 Nham_0281 Nitrobacter hamburgensis X14 hypothetical protein YP_575639.1 311997 D 323097 CDS YP_575640.1 92115911 4031162 complement(312683..313237) 1 NC_007964.1 resolvase-like protein 313237 4031162 Nham_0282 Nitrobacter hamburgensis X14 resolvase-like protein YP_575640.1 312683 R 323097 CDS YP_575641.1 92115912 4031163 313607..313891 1 NC_007964.1 hypothetical protein 313891 4031163 Nham_0283 Nitrobacter hamburgensis X14 hypothetical protein YP_575641.1 313607 D 323097 CDS YP_575642.1 92115913 4031164 complement(313901..315592) 1 NC_007964.1 phage integrase 315592 4031164 Nham_0284 Nitrobacter hamburgensis X14 phage integrase YP_575642.1 313901 R 323097 CDS YP_575643.1 92115914 4030555 316402..317691 1 NC_007964.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 317691 4030555 Nham_0285 Nitrobacter hamburgensis X14 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_575643.1 316402 D 323097 CDS YP_575644.1 92115915 4030556 317895..319190 1 NC_007964.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 319190 hisD 4030556 hisD Nitrobacter hamburgensis X14 histidinol dehydrogenase YP_575644.1 317895 D 323097 CDS YP_575645.1 92115916 4030557 319187..319681 1 NC_007964.1 hypothetical protein 319681 4030557 Nham_0287 Nitrobacter hamburgensis X14 hypothetical protein YP_575645.1 319187 D 323097 CDS YP_575646.1 92115917 4030558 319776..320243 1 NC_007964.1 protein tyrosine phosphatase 320243 4030558 Nham_0288 Nitrobacter hamburgensis X14 protein tyrosine phosphatase YP_575646.1 319776 D 323097 CDS YP_575647.1 92115918 4030559 320355..321692 1 NC_007964.1 transposase 321692 4030559 Nham_0289 Nitrobacter hamburgensis X14 transposase YP_575647.1 320355 D 323097 CDS YP_575648.1 92115919 4030562 323887..324510 1 NC_007964.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 324510 4030562 Nham_0292 Nitrobacter hamburgensis X14 Maf-like protein YP_575648.1 323887 D 323097 CDS YP_575649.1 92115920 4030563 324500..324682 1 NC_007964.1 zinc-binding protein 324682 4030563 Nham_0293 Nitrobacter hamburgensis X14 zinc-binding protein YP_575649.1 324500 D 323097 CDS YP_575650.1 92115921 4030565 325063..326262 1 NC_007964.1 phage integrase 326262 4030565 Nham_0294 Nitrobacter hamburgensis X14 phage integrase YP_575650.1 325063 D 323097 CDS YP_575651.1 92115922 4030566 327478..328680 1 NC_007964.1 hypothetical protein 328680 4030566 Nham_0295 Nitrobacter hamburgensis X14 hypothetical protein YP_575651.1 327478 D 323097 CDS YP_575652.1 92115923 4030567 328825..329229 1 NC_007964.1 hypothetical protein 329229 4030567 Nham_0296 Nitrobacter hamburgensis X14 hypothetical protein YP_575652.1 328825 D 323097 CDS YP_575653.1 92115924 4030568 329222..332593 1 NC_007964.1 hypothetical protein 332593 4030568 Nham_0297 Nitrobacter hamburgensis X14 hypothetical protein YP_575653.1 329222 D 323097 CDS YP_575654.1 92115925 4030569 332707..333642 1 NC_007964.1 hypothetical protein 333642 4030569 Nham_0298 Nitrobacter hamburgensis X14 hypothetical protein YP_575654.1 332707 D 323097 CDS YP_575655.1 92115926 4030570 334182..334670 1 NC_007964.1 HNH endonuclease 334670 4030570 Nham_0299 Nitrobacter hamburgensis X14 HNH endonuclease YP_575655.1 334182 D 323097 CDS YP_575656.1 92115927 4030571 complement(334671..334883) 1 NC_007964.1 hypothetical protein 334883 4030571 Nham_0300 Nitrobacter hamburgensis X14 hypothetical protein YP_575656.1 334671 R 323097 CDS YP_575657.1 92115928 4030496 335082..335732 1 NC_007964.1 hypothetical protein 335732 4030496 Nham_0301 Nitrobacter hamburgensis X14 hypothetical protein YP_575657.1 335082 D 323097 CDS YP_575658.1 92115929 4030497 336851..337783 1 NC_007964.1 hypothetical protein 337783 4030497 Nham_0302 Nitrobacter hamburgensis X14 hypothetical protein YP_575658.1 336851 D 323097 CDS YP_575659.1 92115930 4030498 complement(337780..338496) 1 NC_007964.1 hypothetical protein 338496 4030498 Nham_0303 Nitrobacter hamburgensis X14 hypothetical protein YP_575659.1 337780 R 323097 CDS YP_575660.1 92115931 4030499 338590..338937 1 NC_007964.1 hypothetical protein 338937 4030499 Nham_0304 Nitrobacter hamburgensis X14 hypothetical protein YP_575660.1 338590 D 323097 CDS YP_575661.1 92115932 4030500 339098..339466 1 NC_007964.1 hypothetical protein 339466 4030500 Nham_0305 Nitrobacter hamburgensis X14 hypothetical protein YP_575661.1 339098 D 323097 CDS YP_575662.1 92115933 4030501 339511..340377 1 NC_007964.1 antirestriction protein 340377 4030501 Nham_0306 Nitrobacter hamburgensis X14 antirestriction protein YP_575662.1 339511 D 323097 CDS YP_575663.1 92115934 4030502 340648..340911 1 NC_007964.1 hypothetical protein 340911 4030502 Nham_0307 Nitrobacter hamburgensis X14 hypothetical protein YP_575663.1 340648 D 323097 CDS YP_575664.1 92115935 4030503 340991..341329 1 NC_007964.1 endodeoxyribonuclease RusA 341329 4030503 Nham_0308 Nitrobacter hamburgensis X14 endodeoxyribonuclease RusA YP_575664.1 340991 D 323097 CDS YP_575665.1 92115936 4030504 341665..342351 1 NC_007964.1 hypothetical protein 342351 4030504 Nham_0309 Nitrobacter hamburgensis X14 hypothetical protein YP_575665.1 341665 D 323097 CDS YP_575666.1 92115937 4030505 342348..342707 1 NC_007964.1 hypothetical protein 342707 4030505 Nham_0310 Nitrobacter hamburgensis X14 hypothetical protein YP_575666.1 342348 D 323097 CDS YP_575667.1 92115938 4030506 342710..344599 1 NC_007964.1 hypothetical protein 344599 4030506 Nham_0311 Nitrobacter hamburgensis X14 hypothetical protein YP_575667.1 342710 D 323097 CDS YP_575668.1 92115939 4030507 complement(344586..344912) 1 NC_007964.1 hypothetical protein 344912 4030507 Nham_0312 Nitrobacter hamburgensis X14 hypothetical protein YP_575668.1 344586 R 323097 CDS YP_575669.1 92115940 4030508 344959..346329 1 NC_007964.1 hypothetical protein 346329 4030508 Nham_0313 Nitrobacter hamburgensis X14 hypothetical protein YP_575669.1 344959 D 323097 CDS YP_575670.1 92115941 4030509 346336..347844 1 NC_007964.1 hypothetical protein 347844 4030509 Nham_0314 Nitrobacter hamburgensis X14 hypothetical protein YP_575670.1 346336 D 323097 CDS YP_575671.1 92115942 4030510 347848..349305 1 NC_007964.1 hypothetical protein 349305 4030510 Nham_0315 Nitrobacter hamburgensis X14 hypothetical protein YP_575671.1 347848 D 323097 CDS YP_575672.1 92115943 4030511 349822..350184 1 NC_007964.1 hypothetical protein 350184 4030511 Nham_0316 Nitrobacter hamburgensis X14 hypothetical protein YP_575672.1 349822 D 323097 CDS YP_575673.1 92115944 4030512 350187..350573 1 NC_007964.1 hypothetical protein 350573 4030512 Nham_0317 Nitrobacter hamburgensis X14 hypothetical protein YP_575673.1 350187 D 323097 CDS YP_575674.1 92115945 4030513 350726..352225 1 NC_007964.1 integrase catalytic subunit 352225 4030513 Nham_0318 Nitrobacter hamburgensis X14 integrase catalytic subunit YP_575674.1 350726 D 323097 CDS YP_575675.1 92115946 4030514 352225..353088 1 NC_007964.1 IstB-like ATP-binding protein 353088 4030514 Nham_0319 Nitrobacter hamburgensis X14 IstB-like ATP-binding protein YP_575675.1 352225 D 323097 CDS YP_575676.1 92115947 4030515 complement(353245..353643) 1 NC_007964.1 hypothetical protein 353643 4030515 Nham_0320 Nitrobacter hamburgensis X14 hypothetical protein YP_575676.1 353245 R 323097 CDS YP_575677.1 92115948 4030477 complement(353645..353869) 1 NC_007964.1 hypothetical protein 353869 4030477 Nham_0321 Nitrobacter hamburgensis X14 hypothetical protein YP_575677.1 353645 R 323097 CDS YP_575678.1 92115949 4030478 complement(353870..354598) 1 NC_007964.1 hypothetical protein 354598 4030478 Nham_0322 Nitrobacter hamburgensis X14 hypothetical protein YP_575678.1 353870 R 323097 CDS YP_575679.1 92115950 4030479 355588..355890 1 NC_007964.1 hypothetical protein 355890 4030479 Nham_0323 Nitrobacter hamburgensis X14 hypothetical protein YP_575679.1 355588 D 323097 CDS YP_575680.1 92115951 4030480 complement(356016..356792) 1 NC_007964.1 hypothetical protein 356792 4030480 Nham_0324 Nitrobacter hamburgensis X14 hypothetical protein YP_575680.1 356016 R 323097 CDS YP_575681.1 92115952 4030481 complement(356920..358089) 1 NC_007964.1 phage integrase 358089 4030481 Nham_0325 Nitrobacter hamburgensis X14 phage integrase YP_575681.1 356920 R 323097 CDS YP_575682.1 92115953 4030482 complement(358090..358329) 1 NC_007964.1 hypothetical protein 358329 4030482 Nham_0326 Nitrobacter hamburgensis X14 hypothetical protein YP_575682.1 358090 R 323097 CDS YP_575683.1 92115954 4030483 complement(358338..358868) 1 NC_007964.1 hypothetical protein 358868 4030483 Nham_0327 Nitrobacter hamburgensis X14 hypothetical protein YP_575683.1 358338 R 323097 CDS YP_575684.1 92115955 4030484 complement(358937..359347) 1 NC_007964.1 hypothetical protein 359347 4030484 Nham_0328 Nitrobacter hamburgensis X14 hypothetical protein YP_575684.1 358937 R 323097 CDS YP_575685.1 92115956 4030485 359516..360127 1 NC_007964.1 hypothetical protein 360127 4030485 Nham_0329 Nitrobacter hamburgensis X14 hypothetical protein YP_575685.1 359516 D 323097 CDS YP_575686.1 92115957 4030486 360182..361186 1 NC_007964.1 exonuclease 361186 4030486 Nham_0330 Nitrobacter hamburgensis X14 exonuclease YP_575686.1 360182 D 323097 CDS YP_575687.1 92115958 4030487 361194..362111 1 NC_007964.1 hypothetical protein 362111 4030487 Nham_0331 Nitrobacter hamburgensis X14 hypothetical protein YP_575687.1 361194 D 323097 CDS YP_575688.1 92115959 4030488 complement(362135..362470) 1 NC_007964.1 hypothetical protein 362470 4030488 Nham_0332 Nitrobacter hamburgensis X14 hypothetical protein YP_575688.1 362135 R 323097 CDS YP_575689.1 92115960 4030489 complement(362467..364095) 1 NC_007964.1 phage terminase 364095 4030489 Nham_0333 Nitrobacter hamburgensis X14 phage terminase YP_575689.1 362467 R 323097 CDS YP_575690.1 92115961 4030490 complement(364098..364511) 1 NC_007964.1 phage terminase, small subunit , P27 364511 4030490 Nham_0334 Nitrobacter hamburgensis X14 phage terminase, small subunit , P27 YP_575690.1 364098 R 323097 CDS YP_575691.1 92115962 4030491 complement(365205..365558) 1 NC_007964.1 HNH nuclease / phage phi-105 holin-like protein 365558 4030491 Nham_0335 Nitrobacter hamburgensis X14 HNH nuclease / phage phi-105 holin-like protein YP_575691.1 365205 R 323097 CDS YP_575692.1 92115963 4030492 complement(365784..366170) 1 NC_007964.1 hypothetical protein 366170 4030492 Nham_0336 Nitrobacter hamburgensis X14 hypothetical protein YP_575692.1 365784 R 323097 CDS YP_575693.1 92115964 4030493 complement(366230..367378) 1 NC_007964.1 phage major capsid protein, HK97 367378 4030493 Nham_0337 Nitrobacter hamburgensis X14 phage major capsid protein, HK97 YP_575693.1 366230 R 323097 CDS YP_575694.1 92115965 4030494 complement(367386..367919) 1 NC_007964.1 peptidase U35, phage prohead HK97 367919 4030494 Nham_0338 Nitrobacter hamburgensis X14 peptidase U35, phage prohead HK97 YP_575694.1 367386 R 323097 CDS YP_575695.1 92115966 4030495 complement(367916..369139) 1 NC_007964.1 Phage portal protein, HK97 369139 4030495 Nham_0339 Nitrobacter hamburgensis X14 Phage portal protein, HK97 YP_575695.1 367916 R 323097 CDS YP_575696.1 92115967 4030437 complement(369340..369606) 1 NC_007964.1 hypothetical protein 369606 4030437 Nham_0340 Nitrobacter hamburgensis X14 hypothetical protein YP_575696.1 369340 R 323097 CDS YP_575697.1 92115968 4030438 complement(369585..370481) 1 NC_007964.1 hypothetical protein 370481 4030438 Nham_0341 Nitrobacter hamburgensis X14 hypothetical protein YP_575697.1 369585 R 323097 CDS YP_575698.1 92115969 4030439 complement(370827..371612) 1 NC_007964.1 hypothetical protein 371612 4030439 Nham_0342 Nitrobacter hamburgensis X14 hypothetical protein YP_575698.1 370827 R 323097 CDS YP_575699.1 92115970 4030440 complement(371760..373799) 1 NC_007964.1 ATPase-like protein 373799 4030440 Nham_0343 Nitrobacter hamburgensis X14 ATPase-like protein YP_575699.1 371760 R 323097 CDS YP_575700.1 92115971 4030441 complement(374272..375360) 1 NC_007964.1 hypothetical protein 375360 4030441 Nham_0344 Nitrobacter hamburgensis X14 hypothetical protein YP_575700.1 374272 R 323097 CDS YP_575701.1 92115972 4030442 complement(375350..377809) 1 NC_007964.1 hypothetical protein 377809 4030442 Nham_0345 Nitrobacter hamburgensis X14 hypothetical protein YP_575701.1 375350 R 323097 CDS YP_575702.1 92115973 4030443 complement(377806..378489) 1 NC_007964.1 ABC transporter 378489 4030443 Nham_0346 Nitrobacter hamburgensis X14 ABC transporter YP_575702.1 377806 R 323097 CDS YP_575703.1 92115974 4030444 complement(378592..379356) 1 NC_007964.1 hypothetical protein 379356 4030444 Nham_0347 Nitrobacter hamburgensis X14 hypothetical protein YP_575703.1 378592 R 323097 CDS YP_575704.1 92115975 4030445 complement(379353..380750) 1 NC_007964.1 hypothetical protein 380750 4030445 Nham_0348 Nitrobacter hamburgensis X14 hypothetical protein YP_575704.1 379353 R 323097 CDS YP_575705.1 92115976 4030446 381121..383289 1 NC_007964.1 periplasmic sensor hybrid histidine kinase 383289 4030446 Nham_0349 Nitrobacter hamburgensis X14 periplasmic sensor hybrid histidine kinase YP_575705.1 381121 D 323097 CDS YP_575706.1 92115977 4030447 383484..384362 1 NC_007964.1 inner-membrane translocator 384362 4030447 Nham_0350 Nitrobacter hamburgensis X14 inner-membrane translocator YP_575706.1 383484 D 323097 CDS YP_575707.1 92115978 4030448 384365..385402 1 NC_007964.1 inner-membrane translocator 385402 4030448 Nham_0351 Nitrobacter hamburgensis X14 inner-membrane translocator YP_575707.1 384365 D 323097 CDS YP_575708.1 92115979 4030449 385392..386624 1 NC_007964.1 extracellular ligand-binding receptor 386624 4030449 Nham_0352 Nitrobacter hamburgensis X14 extracellular ligand-binding receptor YP_575708.1 385392 D 323097 CDS YP_575709.1 92115980 4030450 complement(386729..387919) 1 NC_007964.1 hypothetical protein 387919 4030450 Nham_0353 Nitrobacter hamburgensis X14 hypothetical protein YP_575709.1 386729 R 323097 CDS YP_575710.1 92115981 4030451 388072..389154 1 NC_007964.1 methyl-accepting chemotaxis sensory transducer 389154 4030451 Nham_0354 Nitrobacter hamburgensis X14 methyl-accepting chemotaxis sensory transducer YP_575710.1 388072 D 323097 CDS YP_575711.1 92115982 4030452 complement(389203..389907) 1 NC_007964.1 ABC transporter 389907 4030452 Nham_0355 Nitrobacter hamburgensis X14 ABC transporter YP_575711.1 389203 R 323097 CDS YP_575712.1 92115983 4030453 complement(389913..390785) 1 NC_007964.1 ABC transporter 390785 4030453 Nham_0356 Nitrobacter hamburgensis X14 ABC transporter YP_575712.1 389913 R 323097 CDS YP_575713.1 92115984 4030454 391060..393183 1 NC_007964.1 3-hydroxyacyl-CoA dehydrogenase 393183 4030454 Nham_0357 Nitrobacter hamburgensis X14 3-hydroxyacyl-CoA dehydrogenase YP_575713.1 391060 D 323097 CDS YP_575714.1 92115985 4030455 393180..394367 1 NC_007964.1 Acetyl-CoA C-acyltransferase 394367 4030455 Nham_0358 Nitrobacter hamburgensis X14 Acetyl-CoA C-acyltransferase YP_575714.1 393180 D 323097 CDS YP_575715.1 92115986 4030456 complement(394509..394913) 1 NC_007964.1 hypothetical protein 394913 4030456 Nham_0359 Nitrobacter hamburgensis X14 hypothetical protein YP_575715.1 394509 R 323097 CDS YP_575716.1 92115987 4030246 395130..396641 1 NC_007964.1 glycerol kinase 396641 4030246 Nham_0360 Nitrobacter hamburgensis X14 glycerol kinase YP_575716.1 395130 D 323097 CDS YP_575717.1 92115988 4030247 396748..397458 1 NC_007964.1 carbonic anhydrase 397458 4030247 Nham_0361 Nitrobacter hamburgensis X14 carbonic anhydrase YP_575717.1 396748 D 323097 CDS YP_575718.1 92115989 4030248 complement(397546..397971) 1 NC_007964.1 PAS/PAC sensor protein 397971 4030248 Nham_0362 Nitrobacter hamburgensis X14 PAS/PAC sensor protein YP_575718.1 397546 R 323097 CDS YP_575719.1 92115990 4030249 complement(397975..401760) 1 NC_007964.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 401760 metH 4030249 metH Nitrobacter hamburgensis X14 B12-dependent methionine synthase YP_575719.1 397975 R 323097 CDS YP_575720.1 92115991 4030250 complement(401985..402899) 1 NC_007964.1 5,10-methylenetetrahydrofolate reductase 402899 4030250 Nham_0364 Nitrobacter hamburgensis X14 5,10-methylenetetrahydrofolate reductase YP_575720.1 401985 R 323097 CDS YP_575721.1 92115992 4030251 complement(403237..404097) 1 NC_007964.1 catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; prephenate dehydratase 404097 4030251 Nham_0365 Nitrobacter hamburgensis X14 prephenate dehydratase YP_575721.1 403237 R 323097 CDS YP_575722.1 92115993 4030252 complement(404142..404297) 1 NC_007964.1 transposase 404297 4030252 Nham_0366 Nitrobacter hamburgensis X14 transposase YP_575722.1 404142 R 323097 CDS YP_575723.1 92115994 4030253 complement(405242..405463) 1 NC_007964.1 cold-shock DNA-binding domain-containing protein 405463 4030253 Nham_0367 Nitrobacter hamburgensis X14 cold-shock DNA-binding domain-containing protein YP_575723.1 405242 R 323097 CDS YP_575724.1 92115995 4030254 complement(405872..406249) 1 NC_007964.1 hypothetical protein 406249 4030254 Nham_0368 Nitrobacter hamburgensis X14 hypothetical protein YP_575724.1 405872 R 323097 CDS YP_575725.1 92115996 4030256 complement(406815..407066) 1 NC_007964.1 hypothetical protein 407066 4030256 Nham_0370 Nitrobacter hamburgensis X14 hypothetical protein YP_575725.1 406815 R 323097 CDS YP_575726.1 92115997 4030260 complement(413490..413918) 1 NC_007964.1 hypothetical protein 413918 4030260 Nham_0374 Nitrobacter hamburgensis X14 hypothetical protein YP_575726.1 413490 R 323097 CDS YP_575727.1 92115998 4030262 complement(414838..415614) 1 NC_007964.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 415614 4030262 Nham_0376 Nitrobacter hamburgensis X14 3-deoxy-manno-octulosonate cytidylyltransferase YP_575727.1 414838 R 323097 CDS YP_575728.1 92115999 4030263 415847..416401 1 NC_007964.1 cytochrome c, class I 416401 4030263 Nham_0377 Nitrobacter hamburgensis X14 cytochrome c, class I YP_575728.1 415847 D 323097 CDS YP_575729.1 92116000 4030264 416792..418771 1 NC_007964.1 extracellular solute-binding protein 418771 4030264 Nham_0378 Nitrobacter hamburgensis X14 extracellular solute-binding protein YP_575729.1 416792 D 323097 CDS YP_575730.1 92116001 4030188 418786..420672 1 NC_007964.1 extracellular solute-binding protein 420672 4030188 Nham_0379 Nitrobacter hamburgensis X14 extracellular solute-binding protein YP_575730.1 418786 D 323097 CDS YP_575731.1 92116002 4030189 420675..421784 1 NC_007964.1 binding-protein-dependent transport systems inner membrane component 421784 4030189 Nham_0380 Nitrobacter hamburgensis X14 binding-protein-dependent transport systems inner membrane component YP_575731.1 420675 D 323097 CDS YP_575732.1 92116003 4030190 421790..422962 1 NC_007964.1 binding-protein-dependent transport system inner membrane protein 422962 4030190 Nham_0381 Nitrobacter hamburgensis X14 binding-protein-dependent transport system inner membrane protein YP_575732.1 421790 D 323097 CDS YP_575733.1 92116004 4030191 422969..424600 1 NC_007964.1 ABC transporter 424600 4030191 Nham_0382 Nitrobacter hamburgensis X14 ABC transporter YP_575733.1 422969 D 323097 CDS YP_575734.1 92116005 4030192 complement(424602..425447) 1 NC_007964.1 NLP/P60 425447 4030192 Nham_0383 Nitrobacter hamburgensis X14 NLP/P60 YP_575734.1 424602 R 323097 CDS YP_575735.1 92116006 4030193 complement(425440..426822) 1 NC_007964.1 leucyl aminopeptidase 426822 4030193 Nham_0384 Nitrobacter hamburgensis X14 leucyl aminopeptidase YP_575735.1 425440 R 323097 CDS YP_575736.1 92116007 4030194 426973..427782 1 NC_007964.1 tetratricopeptide TPR_2 427782 4030194 Nham_0385 Nitrobacter hamburgensis X14 tetratricopeptide TPR_2 YP_575736.1 426973 D 323097 CDS YP_575737.1 92116008 4030195 complement(427875..428852) 1 NC_007964.1 type II secretion system protein 428852 4030195 Nham_0386 Nitrobacter hamburgensis X14 type II secretion system protein YP_575737.1 427875 R 323097 CDS YP_575738.1 92116009 4030196 complement(428862..429836) 1 NC_007964.1 type II secretion system protein 429836 4030196 Nham_0387 Nitrobacter hamburgensis X14 type II secretion system protein YP_575738.1 428862 R 323097 CDS YP_575739.1 92116010 4030197 complement(429849..431318) 1 NC_007964.1 type II secretion system protein E 431318 4030197 Nham_0388 Nitrobacter hamburgensis X14 type II secretion system protein E YP_575739.1 429849 R 323097 CDS YP_575740.1 92116011 4030198 complement(431340..432608) 1 NC_007964.1 pilus assembly protein CpaE 432608 4030198 Nham_0389 Nitrobacter hamburgensis X14 pilus assembly protein CpaE YP_575740.1 431340 R 323097 CDS YP_575741.1 92116012 4030199 complement(432605..433345) 1 NC_007964.1 pilus assembly protein CpaD 433345 4030199 Nham_0390 Nitrobacter hamburgensis X14 pilus assembly protein CpaD YP_575741.1 432605 R 323097 CDS YP_575742.1 92116013 4030200 complement(433367..434827) 1 NC_007964.1 type II and III secretion system protein 434827 4030200 Nham_0391 Nitrobacter hamburgensis X14 type II and III secretion system protein YP_575742.1 433367 R 323097 CDS YP_575743.1 92116014 4030201 complement(434843..435625) 1 NC_007964.1 Flp pilus assembly CpaB 435625 4030201 Nham_0392 Nitrobacter hamburgensis X14 Flp pilus assembly CpaB YP_575743.1 434843 R 323097 CDS YP_575744.1 92116015 4030202 complement(435753..436277) 1 NC_007964.1 peptidase A24A, prepilin type IV 436277 4030202 Nham_0393 Nitrobacter hamburgensis X14 peptidase A24A, prepilin type IV YP_575744.1 435753 R 323097 CDS YP_575745.1 92116016 4030203 complement(436603..436773) 1 NC_007964.1 Flp/Fap pilin component 436773 4030203 Nham_0394 Nitrobacter hamburgensis X14 Flp/Fap pilin component YP_575745.1 436603 R 323097 CDS YP_575746.1 92116017 4030204 437096..437581 1 NC_007964.1 hypothetical protein 437581 4030204 Nham_0395 Nitrobacter hamburgensis X14 hypothetical protein YP_575746.1 437096 D 323097 CDS YP_575747.1 92116018 4030205 437888..438457 1 NC_007964.1 TadE-like protein 438457 4030205 Nham_0396 Nitrobacter hamburgensis X14 TadE-like protein YP_575747.1 437888 D 323097 CDS YP_575748.1 92116019 4030206 438471..439085 1 NC_007964.1 TadE-like protein 439085 4030206 Nham_0397 Nitrobacter hamburgensis X14 TadE-like protein YP_575748.1 438471 D 323097 CDS YP_575749.1 92116020 4030207 complement(439210..439416) 1 NC_007964.1 cold-shock DNA-binding domain-containing protein 439416 4030207 Nham_0398 Nitrobacter hamburgensis X14 cold-shock DNA-binding domain-containing protein YP_575749.1 439210 R 323097 CDS YP_575750.1 92116021 4030132 complement(439693..439974) 1 NC_007964.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 439974 infA 4030132 infA Nitrobacter hamburgensis X14 translation initiation factor IF-1 YP_575750.1 439693 R 323097 CDS YP_575751.1 92116022 4030133 complement(440393..441826) 1 NC_007964.1 DEAD/DEAH box helicase 441826 4030133 Nham_0400 Nitrobacter hamburgensis X14 DEAD/DEAH box helicase YP_575751.1 440393 R 323097 CDS YP_575752.1 92116023 4030134 complement(442300..443178) 1 NC_007964.1 pseudouridine synthase 443178 4030134 Nham_0401 Nitrobacter hamburgensis X14 pseudouridine synthase YP_575752.1 442300 R 323097 CDS YP_575753.1 92116024 4030135 443231..444178 1 NC_007964.1 signal recognition particle-docking protein FtsY 444178 4030135 Nham_0402 Nitrobacter hamburgensis X14 signal recognition particle-docking protein FtsY YP_575753.1 443231 D 323097 CDS YP_575754.1 92116025 4030136 444282..444881 1 NC_007964.1 Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 444881 4030136 Nham_0403 Nitrobacter hamburgensis X14 intracellular septation protein A YP_575754.1 444282 D 323097 CDS YP_575755.1 92116026 4030137 445234..445608 1 NC_007964.1 hypothetical protein 445608 4030137 Nham_0404 Nitrobacter hamburgensis X14 hypothetical protein YP_575755.1 445234 D 323097 CDS YP_575756.1 92116027 4030138 complement(445867..446229) 1 NC_007964.1 hypothetical protein 446229 4030138 Nham_0405 Nitrobacter hamburgensis X14 hypothetical protein YP_575756.1 445867 R 323097 CDS YP_575757.1 92116028 4030139 complement(446447..446818) 1 NC_007964.1 hypothetical protein 446818 4030139 Nham_0406 Nitrobacter hamburgensis X14 hypothetical protein YP_575757.1 446447 R 323097 CDS YP_575758.1 92116029 4030140 complement(447447..448244) 1 NC_007964.1 hypothetical protein 448244 4030140 Nham_0407 Nitrobacter hamburgensis X14 hypothetical protein YP_575758.1 447447 R 323097 CDS YP_575759.1 92116030 4030141 complement(448510..451227) 1 NC_007964.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 451227 4030141 Nham_0408 Nitrobacter hamburgensis X14 aconitate hydratase YP_575759.1 448510 R 323097 CDS YP_575760.1 92116031 4030142 451460..452074 1 NC_007964.1 ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 452074 4030142 Nham_0409 Nitrobacter hamburgensis X14 cytochrome c biogenesis protein CcmA YP_575760.1 451460 D 323097 CDS YP_575761.1 92116032 4030143 452187..452855 1 NC_007964.1 heme exporter protein CcmB 452855 4030143 Nham_0410 Nitrobacter hamburgensis X14 heme exporter protein CcmB YP_575761.1 452187 D 323097 CDS YP_575762.1 92116033 4030144 452950..453681 1 NC_007964.1 heme exporter protein CcmC 453681 4030144 Nham_0411 Nitrobacter hamburgensis X14 heme exporter protein CcmC YP_575762.1 452950 D 323097 CDS YP_575763.1 92116034 4030145 453687..453866 1 NC_007964.1 Heme exporter protein CcmD 453866 4030145 Nham_0412 Nitrobacter hamburgensis X14 Heme exporter protein CcmD YP_575763.1 453687 D 323097 CDS YP_575764.1 92116035 4030146 453863..454456 1 NC_007964.1 periplasmic protein thiol-disulfide oxidoreductase DsbE 454456 4030146 Nham_0413 Nitrobacter hamburgensis X14 periplasmic protein thiol-disulfide oxidoreductase DsbE YP_575764.1 453863 D 323097 CDS YP_575765.1 92116036 4030147 454774..455391 1 NC_007964.1 hypothetical protein 455391 4030147 Nham_0414 Nitrobacter hamburgensis X14 hypothetical protein YP_575765.1 454774 D 323097 CDS YP_575766.1 92116037 4030148 complement(455473..455709) 1 NC_007964.1 hypothetical protein 455709 4030148 Nham_0415 Nitrobacter hamburgensis X14 hypothetical protein YP_575766.1 455473 R 323097 CDS YP_575767.1 92116038 4030149 complement(455831..456898) 1 NC_007964.1 group 1 glycosyl transferase 456898 4030149 Nham_0416 Nitrobacter hamburgensis X14 group 1 glycosyl transferase YP_575767.1 455831 R 323097 CDS YP_575768.1 92116039 4030150 457191..458954 1 NC_007964.1 ABC transporter 458954 4030150 Nham_0417 Nitrobacter hamburgensis X14 ABC transporter YP_575768.1 457191 D 323097 CDS YP_575769.1 92116040 4030112 459040..461247 1 NC_007964.1 amylo-alpha-1,6-glucosidase 461247 4030112 Nham_0418 Nitrobacter hamburgensis X14 amylo-alpha-1,6-glucosidase YP_575769.1 459040 D 323097 CDS YP_575770.1 92116041 4030113 461502..462011 1 NC_007964.1 PRC-barrel 462011 4030113 Nham_0419 Nitrobacter hamburgensis X14 PRC-barrel YP_575770.1 461502 D 323097 CDS YP_575771.1 92116042 4030114 462102..463352 1 NC_007964.1 major facilitator transporter 463352 4030114 Nham_0420 Nitrobacter hamburgensis X14 major facilitator transporter YP_575771.1 462102 D 323097 CDS YP_575772.1 92116043 4030115 complement(463472..463732) 1 NC_007964.1 hypothetical protein 463732 4030115 Nham_0421 Nitrobacter hamburgensis X14 hypothetical protein YP_575772.1 463472 R 323097 CDS YP_575773.1 92116044 4030116 464110..465735 1 NC_007964.1 ferredoxin-dependent glutamate synthase 465735 4030116 Nham_0422 Nitrobacter hamburgensis X14 ferredoxin-dependent glutamate synthase YP_575773.1 464110 D 323097 CDS YP_575774.1 92116045 4030117 complement(465989..468067) 1 NC_007964.1 carbohydrate-selective porin OprB 468067 4030117 Nham_0423 Nitrobacter hamburgensis X14 carbohydrate-selective porin OprB YP_575774.1 465989 R 323097 CDS YP_575775.1 92116046 4030118 complement(468389..469207) 1 NC_007964.1 creatininase 469207 4030118 Nham_0424 Nitrobacter hamburgensis X14 creatininase YP_575775.1 468389 R 323097 CDS YP_575776.1 92116047 4030119 469440..470465 1 NC_007964.1 perplasmic binding protein of ABC transporter 470465 4030119 Nham_0425 Nitrobacter hamburgensis X14 perplasmic binding protein of ABC transporter YP_575776.1 469440 D 323097 CDS YP_575777.1 92116048 4030120 470488..471294 1 NC_007964.1 ABC transporter 471294 4030120 Nham_0426 Nitrobacter hamburgensis X14 ABC transporter YP_575777.1 470488 D 323097 CDS YP_575778.1 92116049 4030121 471291..472130 1 NC_007964.1 binding-protein-dependent transport system inner membrane protein 472130 4030121 Nham_0427 Nitrobacter hamburgensis X14 binding-protein-dependent transport system inner membrane protein YP_575778.1 471291 D 323097 CDS YP_575779.1 92116050 4030122 472130..473113 1 NC_007964.1 D-isomer specific 2-hydroxyacid dehydrogenase 473113 4030122 Nham_0428 Nitrobacter hamburgensis X14 D-isomer specific 2-hydroxyacid dehydrogenase YP_575779.1 472130 D 323097 CDS YP_575780.1 92116051 4030123 473115..473837 1 NC_007964.1 hypothetical protein 473837 4030123 Nham_0429 Nitrobacter hamburgensis X14 hypothetical protein YP_575780.1 473115 D 323097 CDS YP_575781.1 92116052 4030124 complement(473893..474657) 1 NC_007964.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 474657 radC 4030124 radC Nitrobacter hamburgensis X14 DNA repair protein RadC YP_575781.1 473893 R 323097 CDS YP_575782.1 92116053 4030125 complement(474733..475557) 1 NC_007964.1 methionine aminopeptidase 475557 4030125 Nham_0431 Nitrobacter hamburgensis X14 methionine aminopeptidase YP_575782.1 474733 R 323097 CDS YP_575783.1 92116054 4030126 475782..477575 1 NC_007964.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter 477575 4030126 Nham_0432 Nitrobacter hamburgensis X14 potassium/proton antiporter YP_575783.1 475782 D 323097 CDS YP_575784.1 92116055 4030127 complement(477584..478249) 1 NC_007964.1 molybdate ABC transporter ATP-binding protein 478249 4030127 Nham_0433 Nitrobacter hamburgensis X14 molybdate ABC transporter ATP-binding protein YP_575784.1 477584 R 323097 CDS YP_575785.1 92116056 4030128 complement(478252..478947) 1 NC_007964.1 part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; molybdate ABC transporter permease protein 478947 modB 4030128 modB Nitrobacter hamburgensis X14 molybdate ABC transporter permease protein YP_575785.1 478252 R 323097 CDS YP_575786.1 92116057 4030129 complement(479171..479995) 1 NC_007964.1 molybdenum ABC transporter, periplasmic molybdate-binding protein 479995 4030129 Nham_0435 Nitrobacter hamburgensis X14 molybdenum ABC transporter, periplasmic molybdate-binding protein YP_575786.1 479171 R 323097 CDS YP_575787.1 92116058 4030131 complement(480946..481908) 1 NC_007964.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase 481908 mepA 4030131 mepA Nitrobacter hamburgensis X14 penicillin-insensitive murein endopeptidase YP_575787.1 480946 R 323097 CDS YP_575788.1 92116059 4030073 complement(482229..484061) 1 NC_007964.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 484061 4030073 Nham_0438 Nitrobacter hamburgensis X14 GTP-binding protein LepA YP_575788.1 482229 R 323097 CDS YP_575789.1 92116060 4030074 complement(484410..484751) 1 NC_007964.1 hypothetical protein 484751 4030074 Nham_0439 Nitrobacter hamburgensis X14 hypothetical protein YP_575789.1 484410 R 323097 CDS YP_575790.1 92116061 4030075 complement(484748..485149) 1 NC_007964.1 PTS system fructose subfamily transporter subunit IIA 485149 4030075 Nham_0440 Nitrobacter hamburgensis X14 PTS system fructose subfamily transporter subunit IIA YP_575790.1 484748 R 323097 CDS YP_575791.1 92116062 4030076 complement(485300..485806) 1 NC_007964.1 HPr kinase 485806 4030076 Nham_0441 Nitrobacter hamburgensis X14 HPr kinase YP_575791.1 485300 R 323097 CDS YP_575792.1 92116063 4030077 complement(485803..487626) 1 NC_007964.1 sensor signal transduction histidine kinase 487626 4030077 Nham_0442 Nitrobacter hamburgensis X14 sensor signal transduction histidine kinase YP_575792.1 485803 R 323097 CDS YP_575793.1 92116064 4030078 complement(487860..488561) 1 NC_007964.1 two component transcriptional regulator 488561 4030078 Nham_0443 Nitrobacter hamburgensis X14 two component transcriptional regulator YP_575793.1 487860 R 323097 CDS YP_575794.1 92116065 4030079 488775..489518 1 NC_007964.1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 489518 4030079 Nham_0444 Nitrobacter hamburgensis X14 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_575794.1 488775 D 323097 CDS YP_575795.1 92116066 4030080 489699..491315 1 NC_007964.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 491315 4030080 Nham_0445 Nitrobacter hamburgensis X14 phosphoenolpyruvate carboxykinase YP_575795.1 489699 D 323097 CDS YP_575796.1 92116067 4030081 491570..492463 1 NC_007964.1 Beta-lactamase 492463 4030081 Nham_0446 Nitrobacter hamburgensis X14 Beta-lactamase YP_575796.1 491570 D 323097 CDS YP_575797.1 92116068 4030082 complement(492588..493565) 1 NC_007964.1 arginase 493565 4030082 Nham_0447 Nitrobacter hamburgensis X14 arginase YP_575797.1 492588 R 323097 CDS YP_575798.1 92116069 4030083 complement(493562..496162) 1 NC_007964.1 catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase 496162 ligD 4030083 ligD Nitrobacter hamburgensis X14 ATP-dependent DNA ligase YP_575798.1 493562 R 323097 CDS YP_575799.1 92116070 4030084 complement(496168..496497) 1 NC_007964.1 hypothetical protein 496497 4030084 Nham_0449 Nitrobacter hamburgensis X14 hypothetical protein YP_575799.1 496168 R 323097 CDS YP_575800.1 92116071 4030085 complement(496543..497544) 1 NC_007964.1 hypothetical protein 497544 4030085 Nham_0450 Nitrobacter hamburgensis X14 hypothetical protein YP_575800.1 496543 R 323097 CDS YP_575801.1 92116072 4030086 complement(497772..498413) 1 NC_007964.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 498413 pyrE 4030086 pyrE Nitrobacter hamburgensis X14 orotate phosphoribosyltransferase YP_575801.1 497772 R 323097 CDS YP_575802.1 92116073 4030087 complement(498435..499070) 1 NC_007964.1 lysine exporter protein LysE/YggA 499070 4030087 Nham_0452 Nitrobacter hamburgensis X14 lysine exporter protein LysE/YggA YP_575802.1 498435 R 323097 CDS YP_575803.1 92116074 4030088 complement(499092..502136) 1 NC_007964.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 502136 4030088 Nham_0453 Nitrobacter hamburgensis X14 DNA polymerase I YP_575803.1 499092 R 323097 CDS YP_575804.1 92116075 4030089 complement(502307..503353) 1 NC_007964.1 acyltransferase 3 503353 4030089 Nham_0454 Nitrobacter hamburgensis X14 acyltransferase 3 YP_575804.1 502307 R 323097 CDS YP_575805.1 92116076 4030090 503540..506029 1 NC_007964.1 ATP-dependent helicase HrpB 506029 4030090 Nham_0455 Nitrobacter hamburgensis X14 ATP-dependent helicase HrpB YP_575805.1 503540 D 323097 CDS YP_575806.1 92116077 4030091 506119..506829 1 NC_007964.1 MgtC/SapB transporter 506829 4030091 Nham_0456 Nitrobacter hamburgensis X14 MgtC/SapB transporter YP_575806.1 506119 D 323097 CDS YP_575807.1 92116078 4030036 506940..507467 1 NC_007964.1 hypothetical protein 507467 4030036 Nham_0457 Nitrobacter hamburgensis X14 hypothetical protein YP_575807.1 506940 D 323097 CDS YP_575808.1 92116079 4030037 507612..509111 1 NC_007964.1 phosphoglucomutase/phosphomannomutase alpha/beta/subunit 509111 4030037 Nham_0458 Nitrobacter hamburgensis X14 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_575808.1 507612 D 323097 CDS YP_575809.1 92116080 4030038 complement(509196..509705) 1 NC_007964.1 AsnC family transcriptional regulator 509705 4030038 Nham_0459 Nitrobacter hamburgensis X14 AsnC family transcriptional regulator YP_575809.1 509196 R 323097 CDS YP_575810.1 92116081 4030039 complement(509787..510713) 1 NC_007964.1 PfkB protein 510713 4030039 Nham_0460 Nitrobacter hamburgensis X14 PfkB protein YP_575810.1 509787 R 323097 CDS YP_575811.1 92116082 4030040 complement(510935..511351) 1 NC_007964.1 histidine triad (HIT) protein 511351 4030040 Nham_0461 Nitrobacter hamburgensis X14 histidine triad (HIT) protein YP_575811.1 510935 R 323097 CDS YP_575812.1 92116083 4030042 511693..513540 1 NC_007964.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 513540 4030042 Nham_0462 Nitrobacter hamburgensis X14 DNA polymerase III subunits gamma and tau YP_575812.1 511693 D 323097 CDS YP_575813.1 92116084 4030043 513556..513876 1 NC_007964.1 hypothetical protein 513876 4030043 Nham_0463 Nitrobacter hamburgensis X14 hypothetical protein YP_575813.1 513556 D 323097 CDS YP_575814.1 92116085 4030044 513959..514561 1 NC_007964.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 514561 recR 4030044 recR Nitrobacter hamburgensis X14 recombination protein RecR YP_575814.1 513959 D 323097 CDS YP_575815.1 92116086 4030045 complement(514689..515099) 1 NC_007964.1 hypothetical protein 515099 4030045 Nham_0465 Nitrobacter hamburgensis X14 hypothetical protein YP_575815.1 514689 R 323097 CDS YP_575816.1 92116087 4030046 complement(515115..515882) 1 NC_007964.1 hydroxyacylglutathione hydrolase 515882 4030046 Nham_0466 Nitrobacter hamburgensis X14 hydroxyacylglutathione hydrolase YP_575816.1 515115 R 323097 CDS YP_575817.1 92116088 4030047 516122..516862 1 NC_007964.1 hypothetical protein 516862 4030047 Nham_0467 Nitrobacter hamburgensis X14 hypothetical protein YP_575817.1 516122 D 323097 CDS YP_575818.1 92116089 4030048 complement(516920..517642) 1 NC_007964.1 hypothetical protein 517642 4030048 Nham_0468 Nitrobacter hamburgensis X14 hypothetical protein YP_575818.1 516920 R 323097 CDS YP_575819.1 92116090 4030049 complement(518137..519090) 1 NC_007964.1 HemK family modification methylase 519090 4030049 Nham_0469 Nitrobacter hamburgensis X14 HemK family modification methylase YP_575819.1 518137 R 323097 CDS YP_575820.1 92116091 4030050 complement(519175..520260) 1 NC_007964.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 520260 prfA 4030050 prfA Nitrobacter hamburgensis X14 peptide chain release factor 1 YP_575820.1 519175 R 323097 CDS YP_575821.1 92116092 4030051 complement(520309..522576) 1 NC_007964.1 phosphoenolpyruvate-protein phosphotransferase PtsP 522576 4030051 Nham_0471 Nitrobacter hamburgensis X14 phosphoenolpyruvate-protein phosphotransferase PtsP YP_575821.1 520309 R 323097 CDS YP_575822.1 92116093 4030052 complement(522876..524129) 1 NC_007964.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 524129 4030052 Nham_0472 Nitrobacter hamburgensis X14 aspartate kinase YP_575822.1 522876 R 323097 CDS YP_575823.1 92116094 4030053 524335..524802 1 NC_007964.1 membrane-flanked domain-containing protein 524802 4030053 Nham_0473 Nitrobacter hamburgensis X14 membrane-flanked domain-containing protein YP_575823.1 524335 D 323097 CDS YP_575824.1 92116095 4030054 524818..525591 1 NC_007964.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 525591 4030054 Nham_0474 Nitrobacter hamburgensis X14 3-demethylubiquinone-9 3-methyltransferase YP_575824.1 524818 D 323097 CDS YP_575825.1 92116096 4029847 525760..526698 1 NC_007964.1 hypothetical protein 526698 4029847 Nham_0475 Nitrobacter hamburgensis X14 hypothetical protein YP_575825.1 525760 D 323097 CDS YP_575826.1 92116097 4029848 complement(526699..527139) 1 NC_007964.1 hypothetical protein 527139 4029848 Nham_0476 Nitrobacter hamburgensis X14 hypothetical protein YP_575826.1 526699 R 323097 CDS YP_575827.1 92116098 4029849 complement(527146..527589) 1 NC_007964.1 hypothetical protein 527589 4029849 Nham_0477 Nitrobacter hamburgensis X14 hypothetical protein YP_575827.1 527146 R 323097 CDS YP_575828.1 92116099 4029850 complement(527586..527828) 1 NC_007964.1 hypothetical protein 527828 4029850 Nham_0478 Nitrobacter hamburgensis X14 hypothetical protein YP_575828.1 527586 R 323097 CDS YP_575829.1 92116100 4029851 complement(527825..528706) 1 NC_007964.1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 528706 4029851 Nham_0479 Nitrobacter hamburgensis X14 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_575829.1 527825 R 323097 CDS YP_575830.1 92116101 4029852 complement(528759..529571) 1 NC_007964.1 phosphoribosyltransferase 529571 4029852 Nham_0480 Nitrobacter hamburgensis X14 phosphoribosyltransferase YP_575830.1 528759 R 323097 CDS YP_575831.1 92116102 4029853 529735..530673 1 NC_007964.1 methyltransferase 530673 4029853 Nham_0481 Nitrobacter hamburgensis X14 methyltransferase YP_575831.1 529735 D 323097 CDS YP_575832.1 92116103 4029854 complement(530806..531258) 1 NC_007964.1 NUDIX hydrolase 531258 4029854 Nham_0482 Nitrobacter hamburgensis X14 NUDIX hydrolase YP_575832.1 530806 R 323097 CDS YP_575833.1 92116104 4029855 complement(531388..532668) 1 NC_007964.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 532668 argJ 4029855 argJ Nitrobacter hamburgensis X14 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_575833.1 531388 R 323097 CDS YP_575834.1 92116105 4029856 complement(532719..533645) 1 NC_007964.1 PpiC-type peptidyl-prolyl cis-trans isomerase 533645 4029856 Nham_0484 Nitrobacter hamburgensis X14 PpiC-type peptidyl-prolyl cis-trans isomerase YP_575834.1 532719 R 323097 CDS YP_575835.1 92116106 4029857 534221..537076 1 NC_007964.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 537076 4029857 Nham_0485 Nitrobacter hamburgensis X14 preprotein translocase subunit SecA YP_575835.1 534221 D 323097 CDS YP_575836.1 92116107 4029858 complement(537367..538875) 1 NC_007964.1 hypothetical protein 538875 4029858 Nham_0486 Nitrobacter hamburgensis X14 hypothetical protein YP_575836.1 537367 R 323097 CDS YP_575837.1 92116108 4029859 complement(539076..540038) 1 NC_007964.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 540038 4029859 Nham_0487 Nitrobacter hamburgensis X14 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_575837.1 539076 R 323097 CDS YP_575838.1 92116109 4029860 complement(540250..541209) 1 NC_007964.1 tyrosine recombinase XerD 541209 4029860 Nham_0488 Nitrobacter hamburgensis X14 tyrosine recombinase XerD YP_575838.1 540250 R 323097 CDS YP_575839.1 92116110 4029861 complement(541226..541372) 1 NC_007964.1 hypothetical protein 541372 4029861 Nham_0489 Nitrobacter hamburgensis X14 hypothetical protein YP_575839.1 541226 R 323097 CDS YP_575840.1 92116111 4029862 541674..542348 1 NC_007964.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 542348 4029862 Nham_0490 Nitrobacter hamburgensis X14 shikimate kinase YP_575840.1 541674 D 323097 CDS YP_575841.1 92116112 4029863 542345..543496 1 NC_007964.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 543496 aroB 4029863 aroB Nitrobacter hamburgensis X14 3-dehydroquinate synthase YP_575841.1 542345 D 323097 CDS YP_575842.1 92116113 4029864 543685..545037 1 NC_007964.1 hypothetical protein 545037 4029864 Nham_0492 Nitrobacter hamburgensis X14 hypothetical protein YP_575842.1 543685 D 323097 CDS YP_575843.1 92116114 4029865 complement(545201..545530) 1 NC_007964.1 type IV pilus assembly PilZ 545530 4029865 Nham_0493 Nitrobacter hamburgensis X14 type IV pilus assembly PilZ YP_575843.1 545201 R 323097 CDS YP_575844.1 92116115 4029922 complement(545534..546667) 1 NC_007964.1 hypothetical protein 546667 4029922 Nham_0494 Nitrobacter hamburgensis X14 hypothetical protein YP_575844.1 545534 R 323097 CDS YP_575845.1 92116116 4029923 complement(547026..547322) 1 NC_007964.1 BolA-like protein 547322 4029923 Nham_0495 Nitrobacter hamburgensis X14 BolA-like protein YP_575845.1 547026 R 323097 CDS YP_575846.1 92116117 4029924 547407..548063 1 NC_007964.1 heat shock protein DnaJ-like 548063 4029924 Nham_0496 Nitrobacter hamburgensis X14 heat shock protein DnaJ-like YP_575846.1 547407 D 323097 CDS YP_575847.1 92116118 4029925 complement(548074..548793) 1 NC_007964.1 hypothetical protein 548793 4029925 Nham_0497 Nitrobacter hamburgensis X14 hypothetical protein YP_575847.1 548074 R 323097 CDS YP_575848.1 92116119 4029926 549012..550010 1 NC_007964.1 cobalt chelatase small subunit 550010 4029926 Nham_0498 Nitrobacter hamburgensis X14 cobalt chelatase small subunit YP_575848.1 549012 D 323097 CDS YP_575849.1 92116120 4029927 550159..552096 1 NC_007964.1 cobalt chelatase large subunit 552096 4029927 Nham_0499 Nitrobacter hamburgensis X14 cobalt chelatase large subunit YP_575849.1 550159 D 323097 CDS YP_575850.1 92116121 4029928 552344..553423 1 NC_007964.1 hypothetical protein 553423 4029928 Nham_0500 Nitrobacter hamburgensis X14 hypothetical protein YP_575850.1 552344 D 323097 CDS YP_575851.1 92116122 4029929 553559..554440 1 NC_007964.1 patatin 554440 4029929 Nham_0501 Nitrobacter hamburgensis X14 patatin YP_575851.1 553559 D 323097 CDS YP_575852.1 92116123 4029930 complement(554633..554926) 1 NC_007964.1 required for 70S ribosome assembly; 50S ribosomal protein L28 554926 rpmB 4029930 rpmB Nitrobacter hamburgensis X14 50S ribosomal protein L28 YP_575852.1 554633 R 323097 CDS YP_575853.1 92116124 4029931 555422..556282 1 NC_007964.1 hypothetical protein 556282 4029931 Nham_0503 Nitrobacter hamburgensis X14 hypothetical protein YP_575853.1 555422 D 323097 CDS YP_575854.1 92116125 4029932 556605..560027 1 NC_007964.1 helicase-like protein 560027 4029932 Nham_0504 Nitrobacter hamburgensis X14 helicase-like protein YP_575854.1 556605 D 323097 CDS YP_575855.1 92116126 4029933 560106..560381 1 NC_007964.1 RNA-binding S4 560381 4029933 Nham_0505 Nitrobacter hamburgensis X14 RNA-binding S4 YP_575855.1 560106 D 323097 CDS YP_575856.1 92116127 4029934 560618..560956 1 NC_007964.1 4Fe-4S ferredoxin 560956 4029934 Nham_0506 Nitrobacter hamburgensis X14 4Fe-4S ferredoxin YP_575856.1 560618 D 323097 CDS YP_575857.1 92116128 4029935 561346..562125 1 NC_007964.1 CarD family transcriptional regulator 562125 4029935 Nham_0507 Nitrobacter hamburgensis X14 CarD family transcriptional regulator YP_575857.1 561346 D 323097 CDS YP_575858.1 92116129 4029936 complement(562424..563917) 1 NC_007964.1 peptidase M48, Ste24p 563917 4029936 Nham_0508 Nitrobacter hamburgensis X14 peptidase M48, Ste24p YP_575858.1 562424 R 323097 CDS YP_575859.1 92116130 4029937 complement(564040..564861) 1 NC_007964.1 nuclease (SNase-like) 564861 4029937 Nham_0509 Nitrobacter hamburgensis X14 nuclease (SNase-like) YP_575859.1 564040 R 323097 CDS YP_575860.1 92116131 4029938 complement(564861..565139) 1 NC_007964.1 transglycosylase-associated protein 565139 4029938 Nham_0510 Nitrobacter hamburgensis X14 transglycosylase-associated protein YP_575860.1 564861 R 323097 CDS YP_575861.1 92116132 4029939 complement(565226..565807) 1 NC_007964.1 hypothetical protein 565807 4029939 Nham_0511 Nitrobacter hamburgensis X14 hypothetical protein YP_575861.1 565226 R 323097 CDS YP_575862.1 92116133 4029960 complement(566587..567696) 1 NC_007964.1 transposase, IS4 567696 4029960 Nham_0512 Nitrobacter hamburgensis X14 transposase, IS4 YP_575862.1 566587 R 323097 CDS YP_575863.1 92116134 4029962 complement(568605..569741) 1 NC_007964.1 hypothetical protein 569741 4029962 Nham_0513 Nitrobacter hamburgensis X14 hypothetical protein YP_575863.1 568605 R 323097 CDS YP_575864.1 92116135 4029963 570136..570522 1 NC_007964.1 50S ribosomal protein L21 570522 rplU 4029963 rplU Nitrobacter hamburgensis X14 50S ribosomal protein L21 YP_575864.1 570136 D 323097 CDS YP_575865.1 92116136 4029964 570645..570917 1 NC_007964.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 570917 rpmA 4029964 rpmA Nitrobacter hamburgensis X14 50S ribosomal protein L27 YP_575865.1 570645 D 323097 CDS YP_575866.1 92116137 4029965 571059..571661 1 NC_007964.1 N-acetyltransferase GCN5 571661 4029965 Nham_0516 Nitrobacter hamburgensis X14 N-acetyltransferase GCN5 YP_575866.1 571059 D 323097 CDS YP_575867.1 92116138 4029966 571889..572965 1 NC_007964.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 572965 obgE 4029966 obgE Nitrobacter hamburgensis X14 GTPase ObgE YP_575867.1 571889 D 323097 CDS YP_575868.1 92116139 4029967 573119..574258 1 NC_007964.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 574258 4029967 Nham_0518 Nitrobacter hamburgensis X14 gamma-glutamyl kinase YP_575868.1 573119 D 323097 CDS YP_575869.1 92116140 4029968 complement(574531..575124) 1 NC_007964.1 hypothetical protein 575124 4029968 Nham_0519 Nitrobacter hamburgensis X14 hypothetical protein YP_575869.1 574531 R 323097 CDS YP_575870.1 92116141 4029969 575369..576661 1 NC_007964.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 576661 proA 4029969 proA Nitrobacter hamburgensis X14 gamma-glutamyl phosphate reductase YP_575870.1 575369 D 323097 CDS YP_575871.1 92116142 4029970 576748..577383 1 NC_007964.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 577383 nadD 4029970 nadD Nitrobacter hamburgensis X14 nicotinic acid mononucleotide adenylyltransferase YP_575871.1 576748 D 323097 CDS YP_575872.1 92116143 4029971 577641..578003 1 NC_007964.1 Iojap-related protein 578003 4029971 Nham_0522 Nitrobacter hamburgensis X14 Iojap-related protein YP_575872.1 577641 D 323097 CDS YP_575873.1 92116144 4029972 578129..578611 1 NC_007964.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 578611 4029972 Nham_0523 Nitrobacter hamburgensis X14 rRNA large subunit methyltransferase YP_575873.1 578129 D 323097 CDS YP_575874.1 92116145 4029973 578648..580057 1 NC_007964.1 peptidase M23B 580057 4029973 Nham_0524 Nitrobacter hamburgensis X14 peptidase M23B YP_575874.1 578648 D 323097 CDS YP_575875.1 92116146 4029974 580054..581409 1 NC_007964.1 carboxyl-terminal protease 581409 4029974 Nham_0525 Nitrobacter hamburgensis X14 carboxyl-terminal protease YP_575875.1 580054 D 323097 CDS YP_575876.1 92116147 4029975 581559..582764 1 NC_007964.1 hypothetical protein 582764 4029975 Nham_0526 Nitrobacter hamburgensis X14 hypothetical protein YP_575876.1 581559 D 323097 CDS YP_575877.1 92116148 4029976 582789..583328 1 NC_007964.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 583328 4029976 Nham_0527 Nitrobacter hamburgensis X14 dinucleoside polyphosphate hydrolase YP_575877.1 582789 D 323097 CDS YP_575878.1 92116149 4029977 complement(583625..584032) 1 NC_007964.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit epsilon 584032 atpC 4029977 atpC Nitrobacter hamburgensis X14 F0F1 ATP synthase subunit epsilon YP_575878.1 583625 R 323097 CDS YP_575879.1 92116150 4030821 complement(584252..585682) 1 NC_007964.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 585682 4030821 Nham_0529 Nitrobacter hamburgensis X14 F0F1 ATP synthase subunit beta YP_575879.1 584252 R 323097 CDS YP_575880.1 92116151 4030822 complement(585766..586170) 1 NC_007964.1 OsmC-like protein 586170 4030822 Nham_0530 Nitrobacter hamburgensis X14 OsmC-like protein YP_575880.1 585766 R 323097 CDS YP_575881.1 92116152 4030823 complement(586185..587063) 1 NC_007964.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 587063 4030823 Nham_0531 Nitrobacter hamburgensis X14 F0F1 ATP synthase subunit gamma YP_575881.1 586185 R 323097 CDS YP_575882.1 92116153 4030824 complement(587216..588748) 1 NC_007964.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 588748 4030824 Nham_0532 Nitrobacter hamburgensis X14 F0F1 ATP synthase subunit alpha YP_575882.1 587216 R 323097 CDS YP_575883.2 229118943 4030825 complement(588748..589308) 1 NC_007964.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 589308 4030825 Nham_0533 Nitrobacter hamburgensis X14 F0F1 ATP synthase subunit delta YP_575883.2 588748 R 323097 CDS YP_575884.1 92116155 4030826 589953..590462 1 NC_007964.1 rare lipoprotein A 590462 4030826 Nham_0534 Nitrobacter hamburgensis X14 rare lipoprotein A YP_575884.1 589953 D 323097 CDS YP_575885.1 92116156 4030827 complement(590563..592779) 1 NC_007964.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 592779 4030827 Nham_0535 Nitrobacter hamburgensis X14 primosome assembly protein PriA YP_575885.1 590563 R 323097 CDS YP_575886.1 92116157 4030828 592949..593851 1 NC_007964.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 593851 xerC 4030828 xerC Nitrobacter hamburgensis X14 site-specific tyrosine recombinase XerC YP_575886.1 592949 D 323097 CDS YP_575887.1 92116158 4030829 complement(593868..595310) 1 NC_007964.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 595310 4030829 Nham_0537 Nitrobacter hamburgensis X14 dihydrolipoamide dehydrogenase YP_575887.1 593868 R 323097 CDS YP_575888.1 92116159 4030830 complement(595344..595787) 1 NC_007964.1 hypothetical protein 595787 4030830 Nham_0538 Nitrobacter hamburgensis X14 hypothetical protein YP_575888.1 595344 R 323097 CDS YP_575889.1 92116160 4030831 complement(595788..595949) 1 NC_007964.1 hypothetical protein 595949 4030831 Nham_0539 Nitrobacter hamburgensis X14 hypothetical protein YP_575889.1 595788 R 323097 CDS YP_575890.1 92116161 4030832 complement(595946..596446) 1 NC_007964.1 hypothetical protein 596446 4030832 Nham_0540 Nitrobacter hamburgensis X14 hypothetical protein YP_575890.1 595946 R 323097 CDS YP_575891.1 92116162 4030833 complement(596468..597709) 1 NC_007964.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 597709 4030833 Nham_0541 Nitrobacter hamburgensis X14 dihydrolipoamide succinyltransferase YP_575891.1 596468 R 323097 CDS YP_575892.1 92116163 4030834 complement(597850..600819) 1 NC_007964.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 600819 sucA 4030834 sucA Nitrobacter hamburgensis X14 2-oxoglutarate dehydrogenase E1 component YP_575892.1 597850 R 323097 CDS YP_575893.1 92116164 4030835 complement(600955..601839) 1 NC_007964.1 succinyl-CoA synthetase, alpha subunit 601839 4030835 Nham_0543 Nitrobacter hamburgensis X14 succinyl-CoA synthetase, alpha subunit YP_575893.1 600955 R 323097 CDS YP_575894.1 92116165 4030836 complement(601987..603180) 1 NC_007964.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 603180 sucC 4030836 sucC Nitrobacter hamburgensis X14 succinyl-CoA synthetase subunit beta YP_575894.1 601987 R 323097 CDS YP_575895.1 92116166 4030837 complement(603310..604278) 1 NC_007964.1 Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 604278 4030837 Nham_0545 Nitrobacter hamburgensis X14 malate dehydrogenase YP_575895.1 603310 R 323097 CDS YP_575896.1 92116167 4030838 complement(604428..605612) 1 NC_007964.1 AFG1-like ATPase 605612 4030838 Nham_0546 Nitrobacter hamburgensis X14 AFG1-like ATPase YP_575896.1 604428 R 323097 CDS YP_575897.1 92116168 4030839 complement(605686..606222) 1 NC_007964.1 2',5' RNA ligase 606222 4030839 Nham_0547 Nitrobacter hamburgensis X14 2',5' RNA ligase YP_575897.1 605686 R 323097 CDS YP_575898.1 92116169 4030840 complement(606382..607065) 1 NC_007964.1 lipolytic enzyme, G-D-S-L 607065 4030840 Nham_0548 Nitrobacter hamburgensis X14 lipolytic enzyme, G-D-S-L YP_575898.1 606382 R 323097 CDS YP_575899.1 92116170 4031297 607262..607786 1 NC_007964.1 ABC transporter 607786 4031297 Nham_0549 Nitrobacter hamburgensis X14 ABC transporter YP_575899.1 607262 D 323097 CDS YP_575900.1 92116171 4031298 607908..610484 1 NC_007964.1 hypothetical protein 610484 4031298 Nham_0550 Nitrobacter hamburgensis X14 hypothetical protein YP_575900.1 607908 D 323097 CDS YP_575901.1 92116172 4031299 610806..611621 1 NC_007964.1 hypothetical protein 611621 4031299 Nham_0551 Nitrobacter hamburgensis X14 hypothetical protein YP_575901.1 610806 D 323097 CDS YP_575902.1 92116173 4031300 611792..612835 1 NC_007964.1 hypothetical protein 612835 4031300 Nham_0552 Nitrobacter hamburgensis X14 hypothetical protein YP_575902.1 611792 D 323097 CDS YP_575903.1 92116174 4031301 612832..614517 1 NC_007964.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; ATP-dependent DNA ligase 614517 4031301 Nham_0553 Nitrobacter hamburgensis X14 ATP-dependent DNA ligase YP_575903.1 612832 D 323097 CDS YP_575904.1 92116175 4031302 614621..614926 1 NC_007964.1 hypothetical protein 614926 4031302 Nham_0554 Nitrobacter hamburgensis X14 hypothetical protein YP_575904.1 614621 D 323097 CDS YP_575905.1 92116176 4031303 complement(615093..616187) 1 NC_007964.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 616187 4031303 Nham_0555 Nitrobacter hamburgensis X14 dihydroorotate dehydrogenase 2 YP_575905.1 615093 R 323097 CDS YP_575906.1 92116177 4031304 complement(616184..616579) 1 NC_007964.1 hypothetical protein 616579 4031304 Nham_0556 Nitrobacter hamburgensis X14 hypothetical protein YP_575906.1 616184 R 323097 CDS YP_575907.1 92116178 4031305 616762..617394 1 NC_007964.1 phage repressor 617394 4031305 Nham_0557 Nitrobacter hamburgensis X14 phage repressor YP_575907.1 616762 D 323097 CDS YP_575908.1 92116179 4031306 complement(617458..619416) 1 NC_007964.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 619416 4031306 Nham_0558 Nitrobacter hamburgensis X14 acetyl-CoA synthetase YP_575908.1 617458 R 323097 CDS YP_575909.1 92116180 4031307 complement(619831..620244) 1 NC_007964.1 hypothetical protein 620244 4031307 Nham_0559 Nitrobacter hamburgensis X14 hypothetical protein YP_575909.1 619831 R 323097 CDS YP_575910.1 92116181 4031308 complement(620247..621227) 1 NC_007964.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 621227 gpsA 4031308 gpsA Nitrobacter hamburgensis X14 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_575910.1 620247 R 323097 CDS YP_575911.1 92116182 4031309 complement(621241..622314) 1 NC_007964.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 622314 4031309 Nham_0561 Nitrobacter hamburgensis X14 DNA-binding/iron metalloprotein/AP endonuclease YP_575911.1 621241 R 323097 CDS YP_575912.1 92116183 4031310 622408..623358 1 NC_007964.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 623358 hemC 4031310 hemC Nitrobacter hamburgensis X14 porphobilinogen deaminase YP_575912.1 622408 D 323097 CDS YP_575913.1 92116184 4031311 623362..624108 1 NC_007964.1 uroporphyrinogen III synthase HEM4 624108 4031311 Nham_0563 Nitrobacter hamburgensis X14 uroporphyrinogen III synthase HEM4 YP_575913.1 623362 D 323097 CDS YP_575914.1 92116185 4031312 624195..625535 1 NC_007964.1 hypothetical protein 625535 4031312 Nham_0564 Nitrobacter hamburgensis X14 hypothetical protein YP_575914.1 624195 D 323097 CDS YP_575915.1 92116186 4031313 625543..627201 1 NC_007964.1 HemY-like 627201 4031313 Nham_0565 Nitrobacter hamburgensis X14 HemY-like YP_575915.1 625543 D 323097 CDS YP_575916.1 92116187 4030708 627567..627821 1 NC_007964.1 YcfA-like 627821 4030708 Nham_0566 Nitrobacter hamburgensis X14 YcfA-like YP_575916.1 627567 D 323097 CDS YP_575917.1 92116188 4030709 627800..628192 1 NC_007964.1 hypothetical protein 628192 4030709 Nham_0567 Nitrobacter hamburgensis X14 hypothetical protein YP_575917.1 627800 D 323097 CDS YP_575918.1 92116189 4030710 complement(628229..629872) 1 NC_007964.1 recombinase 629872 4030710 Nham_0568 Nitrobacter hamburgensis X14 recombinase YP_575918.1 628229 R 323097 CDS YP_575919.1 92116190 4030711 630346..630993 1 NC_007964.1 DNA methylase N-4/N-6 630993 4030711 Nham_0569 Nitrobacter hamburgensis X14 DNA methylase N-4/N-6 YP_575919.1 630346 D 323097 CDS YP_575920.1 92116191 4030712 complement(631130..631822) 1 NC_007964.1 hypothetical protein 631822 4030712 Nham_0570 Nitrobacter hamburgensis X14 hypothetical protein YP_575920.1 631130 R 323097 CDS YP_575921.1 92116192 4030713 complement(632179..632664) 1 NC_007964.1 hypothetical protein 632664 4030713 Nham_0571 Nitrobacter hamburgensis X14 hypothetical protein YP_575921.1 632179 R 323097 CDS YP_575922.1 92116193 4030714 complement(632633..633307) 1 NC_007964.1 cobyrinic acid a,c-diamide synthase 633307 4030714 Nham_0572 Nitrobacter hamburgensis X14 cobyrinic acid a,c-diamide synthase YP_575922.1 632633 R 323097 CDS YP_575923.1 92116194 4030715 complement(633461..633730) 1 NC_007964.1 hypothetical protein 633730 4030715 Nham_0573 Nitrobacter hamburgensis X14 hypothetical protein YP_575923.1 633461 R 323097 CDS YP_575924.1 92116195 4030716 634335..635249 1 NC_007964.1 antirestriction protein 635249 4030716 Nham_0574 Nitrobacter hamburgensis X14 antirestriction protein YP_575924.1 634335 D 323097 CDS YP_575925.1 92116196 4030717 635520..636305 1 NC_007964.1 hypothetical protein 636305 4030717 Nham_0575 Nitrobacter hamburgensis X14 hypothetical protein YP_575925.1 635520 D 323097 CDS YP_575926.1 92116197 4030718 636332..636598 1 NC_007964.1 hypothetical protein 636598 4030718 Nham_0576 Nitrobacter hamburgensis X14 hypothetical protein YP_575926.1 636332 D 323097 CDS YP_575927.1 92116198 4030719 636807..637097 1 NC_007964.1 plasmid maintenance system killer protein 637097 4030719 Nham_0577 Nitrobacter hamburgensis X14 plasmid maintenance system killer protein YP_575927.1 636807 D 323097 CDS YP_575928.1 92116199 4030720 637107..637433 1 NC_007964.1 XRE family plasmid maintenance system antidote protein 637433 4030720 Nham_0578 Nitrobacter hamburgensis X14 XRE family plasmid maintenance system antidote protein YP_575928.1 637107 D 323097 CDS YP_575929.1 92116200 4030721 637677..637982 1 NC_007964.1 XRE family plasmid maintenance system antidote protein 637982 4030721 Nham_0579 Nitrobacter hamburgensis X14 XRE family plasmid maintenance system antidote protein YP_575929.1 637677 D 323097 CDS YP_575930.1 92116201 4030722 638076..641291 1 NC_007964.1 helicase-like protein 641291 4030722 Nham_0580 Nitrobacter hamburgensis X14 helicase-like protein YP_575930.1 638076 D 323097 CDS YP_575931.1 92116202 4030723 641288..642058 1 NC_007964.1 hypothetical protein 642058 4030723 Nham_0581 Nitrobacter hamburgensis X14 hypothetical protein YP_575931.1 641288 D 323097 CDS YP_575932.1 92116203 4030724 642076..644058 1 NC_007964.1 DNA methylase N-4/N-6 644058 4030724 Nham_0582 Nitrobacter hamburgensis X14 DNA methylase N-4/N-6 YP_575932.1 642076 D 323097 CDS YP_575933.1 92116204 4030726 complement(647248..647715) 1 NC_007964.1 hypothetical protein 647715 4030726 Nham_0584 Nitrobacter hamburgensis X14 hypothetical protein YP_575933.1 647248 R 323097 CDS YP_575934.1 92116205 4030727 complement(647842..648411) 1 NC_007964.1 resolvase-like protein 648411 4030727 Nham_0585 Nitrobacter hamburgensis X14 resolvase-like protein YP_575934.1 647842 R 323097 CDS YP_575935.1 92116206 4030920 648625..648903 1 NC_007964.1 hypothetical protein 648903 4030920 Nham_0586 Nitrobacter hamburgensis X14 hypothetical protein YP_575935.1 648625 D 323097 CDS YP_575936.1 92116207 4030921 648869..652162 1 NC_007964.1 hypothetical protein 652162 4030921 Nham_0587 Nitrobacter hamburgensis X14 hypothetical protein YP_575936.1 648869 D 323097 CDS YP_575937.1 92116208 4030922 652618..652854 1 NC_007964.1 hypothetical protein 652854 4030922 Nham_0588 Nitrobacter hamburgensis X14 hypothetical protein YP_575937.1 652618 D 323097 CDS YP_575938.1 92116209 4030923 652851..653096 1 NC_007964.1 hypothetical protein 653096 4030923 Nham_0589 Nitrobacter hamburgensis X14 hypothetical protein YP_575938.1 652851 D 323097 CDS YP_575939.1 92116210 4030924 complement(653153..653446) 1 NC_007964.1 hypothetical protein 653446 4030924 Nham_0590 Nitrobacter hamburgensis X14 hypothetical protein YP_575939.1 653153 R 323097 CDS YP_575940.1 92116211 4030925 complement(653479..654057) 1 NC_007964.1 hypothetical protein 654057 4030925 Nham_0591 Nitrobacter hamburgensis X14 hypothetical protein YP_575940.1 653479 R 323097 CDS YP_575941.1 92116212 4030926 complement(654054..654815) 1 NC_007964.1 hypothetical protein 654815 4030926 Nham_0592 Nitrobacter hamburgensis X14 hypothetical protein YP_575941.1 654054 R 323097 CDS YP_575942.1 92116213 4030927 complement(654831..656558) 1 NC_007964.1 TRAG protein 656558 4030927 Nham_0593 Nitrobacter hamburgensis X14 TRAG protein YP_575942.1 654831 R 323097 CDS YP_575943.1 92116214 4030928 657378..657731 1 NC_007964.1 hypothetical protein 657731 4030928 Nham_0594 Nitrobacter hamburgensis X14 hypothetical protein YP_575943.1 657378 D 323097 CDS YP_575944.1 92116215 4030929 658042..658419 1 NC_007964.1 hypothetical protein 658419 4030929 Nham_0595 Nitrobacter hamburgensis X14 hypothetical protein YP_575944.1 658042 D 323097 CDS YP_575945.1 92116216 4030930 658416..659858 1 NC_007964.1 hypothetical protein 659858 4030930 Nham_0596 Nitrobacter hamburgensis X14 hypothetical protein YP_575945.1 658416 D 323097 CDS YP_575946.1 92116217 4030931 659855..660082 1 NC_007964.1 hypothetical protein 660082 4030931 Nham_0597 Nitrobacter hamburgensis X14 hypothetical protein YP_575946.1 659855 D 323097 CDS YP_575947.1 92116218 4030933 complement(660345..661097) 1 NC_007964.1 phage Gp37Gp68 661097 4030933 Nham_0598 Nitrobacter hamburgensis X14 phage Gp37Gp68 YP_575947.1 660345 R 323097 CDS YP_575948.1 92116219 4030934 complement(661087..662214) 1 NC_007964.1 hypothetical protein 662214 4030934 Nham_0599 Nitrobacter hamburgensis X14 hypothetical protein YP_575948.1 661087 R 323097 CDS YP_575949.1 92116220 4030935 662441..662620 1 NC_007964.1 hypothetical protein 662620 4030935 Nham_0600 Nitrobacter hamburgensis X14 hypothetical protein YP_575949.1 662441 D 323097 CDS YP_575950.1 92116221 4030936 662774..663919 1 NC_007964.1 this protein has no known enzymatic function; beta-lactam binding protein AmpH 663919 4030936 Nham_0601 Nitrobacter hamburgensis X14 beta-lactam binding protein AmpH YP_575950.1 662774 D 323097 CDS YP_575951.1 92116222 4030937 664478..664762 1 NC_007964.1 hypothetical protein 664762 4030937 Nham_0602 Nitrobacter hamburgensis X14 hypothetical protein YP_575951.1 664478 D 323097 CDS YP_575952.1 92116223 4030976 complement(664806..665036) 1 NC_007964.1 hypothetical protein 665036 4030976 Nham_0603 Nitrobacter hamburgensis X14 hypothetical protein YP_575952.1 664806 R 323097 CDS YP_575953.1 92116224 4030977 666361..666591 1 NC_007964.1 hypothetical protein 666591 4030977 Nham_0604 Nitrobacter hamburgensis X14 hypothetical protein YP_575953.1 666361 D 323097 CDS YP_575954.1 92116225 4030978 666725..667204 1 NC_007964.1 hypothetical protein 667204 4030978 Nham_0605 Nitrobacter hamburgensis X14 hypothetical protein YP_575954.1 666725 D 323097 CDS YP_575955.1 92116226 4030979 667327..668097 1 NC_007964.1 short-chain dehydrogenase/reductase SDR 668097 4030979 Nham_0606 Nitrobacter hamburgensis X14 short-chain dehydrogenase/reductase SDR YP_575955.1 667327 D 323097 CDS YP_575956.1 92116227 4030981 668688..668978 1 NC_007964.1 hypothetical protein 668978 4030981 Nham_0607 Nitrobacter hamburgensis X14 hypothetical protein YP_575956.1 668688 D 323097 CDS YP_575957.1 92116228 4030982 668990..669310 1 NC_007964.1 hypothetical protein 669310 4030982 Nham_0608 Nitrobacter hamburgensis X14 hypothetical protein YP_575957.1 668990 D 323097 CDS YP_575958.1 92116229 4030983 669328..670212 1 NC_007964.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 670212 4030983 Nham_0609 Nitrobacter hamburgensis X14 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_575958.1 669328 D 323097 CDS YP_575959.1 92116230 4030984 complement(670344..670874) 1 NC_007964.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 670874 4030984 Nham_0610 Nitrobacter hamburgensis X14 inorganic pyrophosphatase YP_575959.1 670344 R 323097 CDS YP_575960.1 92116231 4030985 complement(671077..671628) 1 NC_007964.1 N-acetyltransferase GCN5 671628 4030985 Nham_0611 Nitrobacter hamburgensis X14 N-acetyltransferase GCN5 YP_575960.1 671077 R 323097 CDS YP_575961.1 92116232 4030986 complement(671772..672542) 1 NC_007964.1 isochorismatase hydrolase 672542 4030986 Nham_0612 Nitrobacter hamburgensis X14 isochorismatase hydrolase YP_575961.1 671772 R 323097 CDS YP_575962.1 92116233 4030987 complement(672837..674096) 1 NC_007964.1 amine oxidase 674096 4030987 Nham_0613 Nitrobacter hamburgensis X14 amine oxidase YP_575962.1 672837 R 323097 CDS YP_575963.1 92116234 4030988 complement(674305..677028) 1 NC_007964.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 677028 4030988 Nham_0614 Nitrobacter hamburgensis X14 DNA mismatch repair protein MutS YP_575963.1 674305 R 323097 CDS YP_575964.1 92116235 4030989 complement(677143..678699) 1 NC_007964.1 EmrB/QacA family drug resistance transporter 678699 4030989 Nham_0615 Nitrobacter hamburgensis X14 EmrB/QacA family drug resistance transporter YP_575964.1 677143 R 323097 CDS YP_575965.1 92116236 4030990 complement(678704..679870) 1 NC_007964.1 secretion protein HlyD 679870 4030990 Nham_0616 Nitrobacter hamburgensis X14 secretion protein HlyD YP_575965.1 678704 R 323097 CDS YP_575966.1 92116237 4030991 complement(679863..680351) 1 NC_007964.1 MarR family transcriptional regulator 680351 4030991 Nham_0617 Nitrobacter hamburgensis X14 MarR family transcriptional regulator YP_575966.1 679863 R 323097 CDS YP_575967.1 92116238 4030992 680588..681079 1 NC_007964.1 ferric uptake regulator family protein 681079 4030992 Nham_0618 Nitrobacter hamburgensis X14 ferric uptake regulator family protein YP_575967.1 680588 D 323097 CDS YP_575968.1 92116239 4030994 681426..682721 1 NC_007964.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 682721 ispG 4030994 ispG Nitrobacter hamburgensis X14 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_575968.1 681426 D 323097 CDS YP_575969.1 92116240 4031278 complement(682799..684406) 1 NC_007964.1 Na+/H+ antiporter 684406 4031278 Nham_0621 Nitrobacter hamburgensis X14 Na+/H+ antiporter YP_575969.1 682799 R 323097 CDS YP_575970.1 92116241 4031279 complement(684615..685301) 1 NC_007964.1 hypothetical protein 685301 4031279 Nham_0622 Nitrobacter hamburgensis X14 hypothetical protein YP_575970.1 684615 R 323097 CDS YP_575971.1 92116242 4031280 complement(685310..686236) 1 NC_007964.1 polyprenyl synthetase 686236 4031280 Nham_0623 Nitrobacter hamburgensis X14 polyprenyl synthetase YP_575971.1 685310 R 323097 CDS YP_575972.1 92116243 4031281 686485..687165 1 NC_007964.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 687165 mtgA 4031281 mtgA Nitrobacter hamburgensis X14 monofunctional biosynthetic peptidoglycan transglycosylase YP_575972.1 686485 D 323097 CDS YP_575973.1 92116244 4031282 687338..687523 1 NC_007964.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 687523 rpmF 4031282 rpmF Nitrobacter hamburgensis X14 50S ribosomal protein L32 YP_575973.1 687338 D 323097 CDS YP_575974.1 92116245 4031283 687651..688301 1 NC_007964.1 hypothetical protein 688301 4031283 Nham_0626 Nitrobacter hamburgensis X14 hypothetical protein YP_575974.1 687651 D 323097 CDS YP_575975.1 92116246 4031284 complement(688432..688833) 1 NC_007964.1 hypothetical protein 688833 4031284 Nham_0627 Nitrobacter hamburgensis X14 hypothetical protein YP_575975.1 688432 R 323097 CDS YP_575976.1 92116247 4031285 688966..690744 1 NC_007964.1 diguanylate cyclase/phosphodiesterase 690744 4031285 Nham_0628 Nitrobacter hamburgensis X14 diguanylate cyclase/phosphodiesterase YP_575976.1 688966 D 323097 CDS YP_575977.1 92116248 4031286 complement(691013..691240) 1 NC_007964.1 hypothetical protein 691240 4031286 Nham_0629 Nitrobacter hamburgensis X14 hypothetical protein YP_575977.1 691013 R 323097 CDS YP_575978.1 92116249 4031287 complement(691376..692434) 1 NC_007964.1 polysaccharide deacetylase 692434 4031287 Nham_0630 Nitrobacter hamburgensis X14 polysaccharide deacetylase YP_575978.1 691376 R 323097 CDS YP_575979.1 92116250 4031288 692718..694109 1 NC_007964.1 OmpA/MotB 694109 4031288 Nham_0631 Nitrobacter hamburgensis X14 OmpA/MotB YP_575979.1 692718 D 323097 CDS YP_575980.1 92116251 4031289 694114..694440 1 NC_007964.1 hypothetical protein 694440 4031289 Nham_0632 Nitrobacter hamburgensis X14 hypothetical protein YP_575980.1 694114 D 323097 CDS YP_575981.1 92116252 4031290 694559..695614 1 NC_007964.1 hypothetical protein 695614 4031290 Nham_0633 Nitrobacter hamburgensis X14 hypothetical protein YP_575981.1 694559 D 323097 CDS YP_575982.1 92116253 4031291 695595..696947 1 NC_007964.1 histidine kinase 696947 4031291 Nham_0634 Nitrobacter hamburgensis X14 histidine kinase YP_575982.1 695595 D 323097 CDS YP_575983.1 92116254 4031292 697072..698097 1 NC_007964.1 periplasmic phosphate binding protein 698097 4031292 Nham_0635 Nitrobacter hamburgensis X14 periplasmic phosphate binding protein YP_575983.1 697072 D 323097 CDS YP_575984.1 92116255 4031293 698224..699222 1 NC_007964.1 phosphate ABC transporter permease 699222 4031293 Nham_0636 Nitrobacter hamburgensis X14 phosphate ABC transporter permease YP_575984.1 698224 D 323097 CDS YP_575985.1 92116256 4031294 699305..700150 1 NC_007964.1 phosphate ABC transporter permease 700150 4031294 Nham_0637 Nitrobacter hamburgensis X14 phosphate ABC transporter permease YP_575985.1 699305 D 323097 CDS YP_575986.1 92116257 4031295 700147..700965 1 NC_007964.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 700965 pstB 4031295 pstB Nitrobacter hamburgensis X14 phosphate transporter ATP-binding protein YP_575986.1 700147 D 323097 CDS YP_575987.1 92116258 4031296 700994..701710 1 NC_007964.1 phosphate uptake regulator PhoU 701710 4031296 Nham_0639 Nitrobacter hamburgensis X14 phosphate uptake regulator PhoU YP_575987.1 700994 D 323097 CDS YP_575988.1 92116259 4031219 701735..702436 1 NC_007964.1 two component transcriptional regulator 702436 4031219 Nham_0640 Nitrobacter hamburgensis X14 two component transcriptional regulator YP_575988.1 701735 D 323097 CDS YP_575989.1 92116260 4031220 complement(702736..703242) 1 NC_007964.1 GcrA cell cycle regulator 703242 4031220 Nham_0641 Nitrobacter hamburgensis X14 GcrA cell cycle regulator YP_575989.1 702736 R 323097 CDS YP_575990.1 92116261 4031221 703690..704901 1 NC_007964.1 DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase protein 704901 argD 4031221 argD Nitrobacter hamburgensis X14 acetylornithine transaminase protein YP_575990.1 703690 D 323097 CDS YP_575991.1 92116262 4031222 704898..705824 1 NC_007964.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 705824 4031222 Nham_0643 Nitrobacter hamburgensis X14 ornithine carbamoyltransferase YP_575991.1 704898 D 323097 CDS YP_575992.1 92116263 4031223 complement(706114..707997) 1 NC_007964.1 GTP-binding protein TypA 707997 4031223 Nham_0644 Nitrobacter hamburgensis X14 GTP-binding protein TypA YP_575992.1 706114 R 323097 CDS YP_575993.1 92116264 4031224 complement(708219..708998) 1 NC_007964.1 CRP/FNR family transcriptional regulator 708998 4031224 Nham_0645 Nitrobacter hamburgensis X14 CRP/FNR family transcriptional regulator YP_575993.1 708219 R 323097 CDS YP_575994.1 92116265 4031225 709160..709579 1 NC_007964.1 response regulator receiver domain-containing protein 709579 4031225 Nham_0646 Nitrobacter hamburgensis X14 response regulator receiver domain-containing protein YP_575994.1 709160 D 323097 CDS YP_575995.1 92116266 4031226 complement(709940..710185) 1 NC_007964.1 hypothetical protein 710185 4031226 Nham_0647 Nitrobacter hamburgensis X14 hypothetical protein YP_575995.1 709940 R 323097 CDS YP_575996.1 92116267 4031227 710606..711787 1 NC_007964.1 protein NnrS 711787 4031227 Nham_0648 Nitrobacter hamburgensis X14 protein NnrS YP_575996.1 710606 D 323097 CDS YP_575997.1 92116268 4031228 complement(711895..712149) 1 NC_007964.1 hypothetical protein 712149 4031228 Nham_0649 Nitrobacter hamburgensis X14 hypothetical protein YP_575997.1 711895 R 323097 CDS YP_575998.1 92116269 4031229 712225..712611 1 NC_007964.1 hypothetical protein 712611 4031229 Nham_0650 Nitrobacter hamburgensis X14 hypothetical protein YP_575998.1 712225 D 323097 CDS YP_575999.1 92116270 4031230 712584..713510 1 NC_007964.1 cytochrome c oxidase assembly protein CtaG/Cox11 713510 4031230 Nham_0651 Nitrobacter hamburgensis X14 cytochrome c oxidase assembly protein CtaG/Cox11 YP_575999.1 712584 D 323097 CDS YP_576000.1 92116271 4031231 713834..714502 1 NC_007964.1 cyclic nucleotide-binding domain-containing protein 714502 4031231 Nham_0652 Nitrobacter hamburgensis X14 cyclic nucleotide-binding domain-containing protein YP_576000.1 713834 D 323097 CDS YP_576001.1 92116272 4031232 714499..715371 1 NC_007964.1 hypothetical protein 715371 4031232 Nham_0653 Nitrobacter hamburgensis X14 hypothetical protein YP_576001.1 714499 D 323097 CDS YP_576002.1 92116273 4031233 715576..715986 1 NC_007964.1 hypothetical protein 715986 4031233 Nham_0654 Nitrobacter hamburgensis X14 hypothetical protein YP_576002.1 715576 D 323097 CDS YP_576003.1 92116274 4031234 716128..716526 1 NC_007964.1 hypothetical protein 716526 4031234 Nham_0655 Nitrobacter hamburgensis X14 hypothetical protein YP_576003.1 716128 D 323097 CDS YP_576004.1 92116275 4031235 716744..717505 1 NC_007964.1 short-chain dehydrogenase/reductase SDR 717505 4031235 Nham_0656 Nitrobacter hamburgensis X14 short-chain dehydrogenase/reductase SDR YP_576004.1 716744 D 323097 CDS YP_576005.1 92116276 4031236 complement(717590..718333) 1 NC_007964.1 hypothetical protein 718333 4031236 Nham_0657 Nitrobacter hamburgensis X14 hypothetical protein YP_576005.1 717590 R 323097 CDS YP_576006.1 92116277 4031237 718425..719000 1 NC_007964.1 MarR family transcriptional regulator 719000 4031237 Nham_0658 Nitrobacter hamburgensis X14 MarR family transcriptional regulator YP_576006.1 718425 D 323097 CDS YP_576007.1 92116278 4031238 complement(719163..720449) 1 NC_007964.1 hydroxypyruvate reductase 720449 4031238 Nham_0659 Nitrobacter hamburgensis X14 hydroxypyruvate reductase YP_576007.1 719163 R 323097 CDS YP_576008.1 92116279 4031205 complement(720687..722759) 1 NC_007964.1 peptidase M23B 722759 4031205 Nham_0660 Nitrobacter hamburgensis X14 peptidase M23B YP_576008.1 720687 R 323097 CDS YP_576009.1 92116280 4031211 729220..729816 1 NC_007964.1 hypothetical protein 729816 4031211 Nham_0661 Nitrobacter hamburgensis X14 hypothetical protein YP_576009.1 729220 D 323097 CDS YP_576010.1 92116281 4031212 730228..731748 1 NC_007964.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 731748 4031212 Nham_0662 Nitrobacter hamburgensis X14 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_576010.1 730228 D 323097 CDS YP_576011.1 92116282 4031213 731802..732356 1 NC_007964.1 methylated-DNA--protein-cysteine methyltransferase 732356 4031213 Nham_0663 Nitrobacter hamburgensis X14 methylated-DNA--protein-cysteine methyltransferase YP_576011.1 731802 D 323097 CDS YP_576012.1 92116283 4031214 732580..735114 1 NC_007964.1 hypothetical protein 735114 4031214 Nham_0664 Nitrobacter hamburgensis X14 hypothetical protein YP_576012.1 732580 D 323097 CDS YP_576013.1 92116284 4031215 complement(735123..735506) 1 NC_007964.1 response regulator receiver domain-containing protein 735506 4031215 Nham_0665 Nitrobacter hamburgensis X14 response regulator receiver domain-containing protein YP_576013.1 735123 R 323097 CDS YP_576014.1 92116285 4031216 complement(735510..736364) 1 NC_007964.1 Zinc finger/thioredoxin 736364 4031216 Nham_0666 Nitrobacter hamburgensis X14 Zinc finger/thioredoxin YP_576014.1 735510 R 323097 CDS YP_576015.1 92116286 4031217 736545..737204 1 NC_007964.1 ABC transporter 737204 4031217 Nham_0667 Nitrobacter hamburgensis X14 ABC transporter YP_576015.1 736545 D 323097 CDS YP_576016.1 92116287 4031218 737197..738168 1 NC_007964.1 hypothetical protein 738168 4031218 Nham_0668 Nitrobacter hamburgensis X14 hypothetical protein YP_576016.1 737197 D 323097 CDS YP_576017.1 92116288 4031166 738264..738980 1 NC_007964.1 hypothetical protein 738980 4031166 Nham_0669 Nitrobacter hamburgensis X14 hypothetical protein YP_576017.1 738264 D 323097 CDS YP_576018.1 92116289 4031167 739006..739773 1 NC_007964.1 phospholipid/glycerol acyltransferase 739773 4031167 Nham_0670 Nitrobacter hamburgensis X14 phospholipid/glycerol acyltransferase YP_576018.1 739006 D 323097 CDS YP_576019.1 92116290 4031168 complement(739897..740481) 1 NC_007964.1 ChaC-like protein 740481 4031168 Nham_0671 Nitrobacter hamburgensis X14 ChaC-like protein YP_576019.1 739897 R 323097 CDS YP_576020.1 92116291 4031169 740662..741852 1 NC_007964.1 hypothetical protein 741852 4031169 Nham_0672 Nitrobacter hamburgensis X14 hypothetical protein YP_576020.1 740662 D 323097 CDS YP_576021.1 92116292 4031170 complement(742041..742982) 1 NC_007964.1 dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; cyclohexadienyl dehydrogenase 742982 4031170 Nham_0673 Nitrobacter hamburgensis X14 cyclohexadienyl dehydrogenase YP_576021.1 742041 R 323097 CDS YP_576022.1 92116293 4031171 complement(742979..744076) 1 NC_007964.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 744076 4031171 Nham_0674 Nitrobacter hamburgensis X14 histidinol-phosphate aminotransferase YP_576022.1 742979 R 323097 CDS YP_576023.1 92116294 4031172 complement(744213..745106) 1 NC_007964.1 hypothetical protein 745106 4031172 Nham_0675 Nitrobacter hamburgensis X14 hypothetical protein YP_576023.1 744213 R 323097 CDS YP_576024.1 92116295 4031173 745394..746593 1 NC_007964.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 746593 metX 4031173 metX Nitrobacter hamburgensis X14 homoserine O-acetyltransferase YP_576024.1 745394 D 323097 CDS YP_576025.1 92116296 4031174 746595..747263 1 NC_007964.1 methionine biosynthesis MetW 747263 4031174 Nham_0677 Nitrobacter hamburgensis X14 methionine biosynthesis MetW YP_576025.1 746595 D 323097 CDS YP_576026.1 92116297 4031176 748176..748778 1 NC_007964.1 hypothetical protein 748778 4031176 Nham_0679 Nitrobacter hamburgensis X14 hypothetical protein YP_576026.1 748176 D 323097 CDS YP_576027.1 92116298 4031177 complement(748951..749829) 1 NC_007964.1 hypothetical protein 749829 4031177 Nham_0680 Nitrobacter hamburgensis X14 hypothetical protein YP_576027.1 748951 R 323097 CDS YP_576028.1 92116299 4031178 749959..752595 1 NC_007964.1 ATPase 752595 4031178 Nham_0681 Nitrobacter hamburgensis X14 ATPase YP_576028.1 749959 D 323097 CDS YP_576029.1 92116300 4031179 753076..754917 1 NC_007964.1 sulfite reductase (NADPH) flavoprotein, alpha chain 754917 4031179 Nham_0682 Nitrobacter hamburgensis X14 sulfite reductase (NADPH) flavoprotein, alpha chain YP_576029.1 753076 D 323097 CDS YP_576030.1 92116301 4031180 754928..756658 1 NC_007964.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta 756658 4031180 Nham_0683 Nitrobacter hamburgensis X14 sulfite reductase subunit beta YP_576030.1 754928 D 323097 CDS YP_576031.1 92116302 4031181 757012..758280 1 NC_007964.1 O-succinylhomoserine (thiol)-lyase 758280 4031181 Nham_0684 Nitrobacter hamburgensis X14 O-succinylhomoserine (thiol)-lyase YP_576031.1 757012 D 323097 CDS YP_576032.1 92116303 4031182 complement(758604..758984) 1 NC_007964.1 hypothetical protein 758984 4031182 Nham_0685 Nitrobacter hamburgensis X14 hypothetical protein YP_576032.1 758604 R 323097 CDS YP_576033.1 92116304 4031183 complement(759197..760306) 1 NC_007964.1 exodeoxyribonuclease V 760306 4031183 Nham_0686 Nitrobacter hamburgensis X14 exodeoxyribonuclease V YP_576033.1 759197 R 323097 CDS YP_576034.1 92116305 4031184 complement(760419..761798) 1 NC_007964.1 two component, sigma54 specific, Fis family transcriptional regulator 761798 4031184 Nham_0687 Nitrobacter hamburgensis X14 two component, sigma54 specific, Fis family transcriptional regulator YP_576034.1 760419 R 323097 CDS YP_576035.1 92116306 4031185 complement(761846..762196) 1 NC_007964.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 762196 4031185 Nham_0688 Nitrobacter hamburgensis X14 flagellar motor switch protein YP_576035.1 761846 R 323097 CDS YP_576036.1 92116307 4031315 complement(762214..762843) 1 NC_007964.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 762843 fliH 4031315 fliH Nitrobacter hamburgensis X14 flagellar assembly protein H YP_576036.1 762214 R 323097 CDS YP_576037.1 92116308 4031316 complement(762843..763931) 1 NC_007964.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 763931 fliG 4031316 fliG Nitrobacter hamburgensis X14 flagellar motor switch protein G YP_576037.1 762843 R 323097 CDS YP_576038.1 92116309 4031317 complement(763938..765560) 1 NC_007964.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 765560 fliF 4031317 fliF Nitrobacter hamburgensis X14 flagellar MS-ring protein YP_576038.1 763938 R 323097 CDS YP_576039.1 92116310 4031318 complement(765739..766014) 1 NC_007964.1 hypothetical protein 766014 4031318 Nham_0692 Nitrobacter hamburgensis X14 hypothetical protein YP_576039.1 765739 R 323097 CDS YP_576040.1 92116311 4031319 complement(766222..766914) 1 NC_007964.1 flagellar hook capping protein 766914 4031319 Nham_0693 Nitrobacter hamburgensis X14 flagellar hook capping protein YP_576040.1 766222 R 323097 CDS YP_576041.1 92116312 4031320 complement(766925..768502) 1 NC_007964.1 flagellar hook-length control protein 768502 4031320 Nham_0694 Nitrobacter hamburgensis X14 flagellar hook-length control protein YP_576041.1 766925 R 323097 CDS YP_576042.1 92116313 4031321 768832..770034 1 NC_007964.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 770034 mnmA 4031321 mnmA Nitrobacter hamburgensis X14 tRNA-specific 2-thiouridylase MnmA YP_576042.1 768832 D 323097 CDS YP_576043.1 92116314 4031322 770057..770695 1 NC_007964.1 phosphatidylethanolamine N-methyltransferase 770695 4031322 Nham_0696 Nitrobacter hamburgensis X14 phosphatidylethanolamine N-methyltransferase YP_576043.1 770057 D 323097 CDS YP_576044.1 92116315 4031323 770746..771090 1 NC_007964.1 hypothetical protein 771090 4031323 Nham_0697 Nitrobacter hamburgensis X14 hypothetical protein YP_576044.1 770746 D 323097 CDS YP_576045.1 92116316 4031325 772098..772880 1 NC_007964.1 phospholipid/glycerol acyltransferase 772880 4031325 Nham_0698 Nitrobacter hamburgensis X14 phospholipid/glycerol acyltransferase YP_576045.1 772098 D 323097 CDS YP_576046.1 92116317 4031326 complement(772868..773815) 1 NC_007964.1 hypothetical protein 773815 4031326 Nham_0699 Nitrobacter hamburgensis X14 hypothetical protein YP_576046.1 772868 R 323097 CDS YP_576047.1 92116318 4031328 774423..775532 1 NC_007964.1 transposase, IS4 775532 4031328 Nham_0701 Nitrobacter hamburgensis X14 transposase, IS4 YP_576047.1 774423 D 323097 CDS YP_576048.1 92116319 4031329 775758..776132 1 NC_007964.1 hypothetical protein 776132 4031329 Nham_0702 Nitrobacter hamburgensis X14 hypothetical protein YP_576048.1 775758 D 323097 CDS YP_576049.1 92116320 4031330 776539..777354 1 NC_007964.1 hypothetical protein 777354 4031330 Nham_0703 Nitrobacter hamburgensis X14 hypothetical protein YP_576049.1 776539 D 323097 CDS YP_576050.1 92116321 4031331 complement(777692..778309) 1 NC_007964.1 hypothetical protein 778309 4031331 Nham_0704 Nitrobacter hamburgensis X14 hypothetical protein YP_576050.1 777692 R 323097 CDS YP_576051.1 92116322 4031332 complement(778313..780025) 1 NC_007964.1 sulfate transporter 780025 4031332 Nham_0705 Nitrobacter hamburgensis X14 sulfate transporter YP_576051.1 778313 R 323097 CDS YP_576052.1 92116323 4031506 complement(780716..781084) 1 NC_007964.1 hypothetical protein 781084 4031506 Nham_0707 Nitrobacter hamburgensis X14 hypothetical protein YP_576052.1 780716 R 323097 CDS YP_576053.1 92116324 4031507 complement(781246..781668) 1 NC_007964.1 DoxX protein 781668 4031507 Nham_0708 Nitrobacter hamburgensis X14 DoxX protein YP_576053.1 781246 R 323097 CDS YP_576054.1 92116325 4031508 complement(781773..782852) 1 NC_007964.1 NADH:flavin oxidoreductase 782852 4031508 Nham_0709 Nitrobacter hamburgensis X14 NADH:flavin oxidoreductase YP_576054.1 781773 R 323097 CDS YP_576055.1 92116326 4031509 complement(783055..783780) 1 NC_007964.1 hypothetical protein 783780 4031509 Nham_0710 Nitrobacter hamburgensis X14 hypothetical protein YP_576055.1 783055 R 323097 CDS YP_576056.1 92116327 4031510 784052..785200 1 NC_007964.1 secretion protein HlyD 785200 4031510 Nham_0711 Nitrobacter hamburgensis X14 secretion protein HlyD YP_576056.1 784052 D 323097 CDS YP_576057.1 92116328 4031511 785232..788405 1 NC_007964.1 hydrophobe/amphiphile efflux-1 HAE1 788405 4031511 Nham_0712 Nitrobacter hamburgensis X14 hydrophobe/amphiphile efflux-1 HAE1 YP_576057.1 785232 D 323097 CDS YP_576058.1 92116329 4031512 complement(788637..789320) 1 NC_007964.1 N-acetyltransferase GCN5 789320 4031512 Nham_0713 Nitrobacter hamburgensis X14 N-acetyltransferase GCN5 YP_576058.1 788637 R 323097 CDS YP_576059.1 92116330 4031513 complement(789496..789699) 1 NC_007964.1 hypothetical protein 789699 4031513 Nham_0714 Nitrobacter hamburgensis X14 hypothetical protein YP_576059.1 789496 R 323097 CDS YP_576060.1 92116331 4031514 790178..791506 1 NC_007964.1 general substrate transporter 791506 4031514 Nham_0715 Nitrobacter hamburgensis X14 general substrate transporter YP_576060.1 790178 D 323097 CDS YP_576061.1 92116332 4031515 791806..792441 1 NC_007964.1 TetR family transcriptional regulator 792441 4031515 Nham_0716 Nitrobacter hamburgensis X14 TetR family transcriptional regulator YP_576061.1 791806 D 323097 CDS YP_576062.1 92116333 4031516 792438..793211 1 NC_007964.1 hypothetical protein 793211 4031516 Nham_0717 Nitrobacter hamburgensis X14 hypothetical protein YP_576062.1 792438 D 323097 CDS YP_576063.1 92116334 4031517 793222..794166 1 NC_007964.1 ABC transporter 794166 4031517 Nham_0718 Nitrobacter hamburgensis X14 ABC transporter YP_576063.1 793222 D 323097 CDS YP_576064.1 92116335 4031518 794163..795320 1 NC_007964.1 hypothetical protein 795320 4031518 Nham_0719 Nitrobacter hamburgensis X14 hypothetical protein YP_576064.1 794163 D 323097 CDS YP_576065.1 92116336 4031519 complement(795369..795623) 1 NC_007964.1 hypothetical protein 795623 4031519 Nham_0720 Nitrobacter hamburgensis X14 hypothetical protein YP_576065.1 795369 R 323097 CDS YP_576066.1 92116337 4031520 complement(795704..796189) 1 NC_007964.1 cupin 2, barrel 796189 4031520 Nham_0721 Nitrobacter hamburgensis X14 cupin 2, barrel YP_576066.1 795704 R 323097 CDS YP_576067.1 92116338 4031521 complement(796527..796937) 1 NC_007964.1 hypothetical protein 796937 4031521 Nham_0722 Nitrobacter hamburgensis X14 hypothetical protein YP_576067.1 796527 R 323097 CDS YP_576068.1 92116339 4031524 798624..805628 1 NC_007964.1 filamentous hemagglutinin-like protein 805628 4031524 Nham_0725 Nitrobacter hamburgensis X14 filamentous hemagglutinin-like protein YP_576068.1 798624 D 323097 CDS YP_576069.1 92116340 4031486 805741..806364 1 NC_007964.1 invasion associated locus B 806364 4031486 Nham_0726 Nitrobacter hamburgensis X14 invasion associated locus B YP_576069.1 805741 D 323097 CDS YP_576070.1 92116341 4031487 806644..808371 1 NC_007964.1 hemolysin activation/secretion protein-like 808371 4031487 Nham_0727 Nitrobacter hamburgensis X14 hemolysin activation/secretion protein-like YP_576070.1 806644 D 323097 CDS YP_576071.1 92116342 4031488 808461..808889 1 NC_007964.1 MotA/TolQ/ExbB proton channel 808889 4031488 Nham_0728 Nitrobacter hamburgensis X14 MotA/TolQ/ExbB proton channel YP_576071.1 808461 D 323097 CDS YP_576072.1 92116343 4031489 808882..809265 1 NC_007964.1 biopolymer transport protein ExbD/TolR 809265 4031489 Nham_0729 Nitrobacter hamburgensis X14 biopolymer transport protein ExbD/TolR YP_576072.1 808882 D 323097 CDS YP_576073.1 92116344 4031490 809320..809997 1 NC_007964.1 TonB-like 809997 4031490 Nham_0730 Nitrobacter hamburgensis X14 TonB-like YP_576073.1 809320 D 323097 CDS YP_576074.1 92116345 4031491 810003..810482 1 NC_007964.1 peptidase A24A, prepilin type IV 810482 4031491 Nham_0731 Nitrobacter hamburgensis X14 peptidase A24A, prepilin type IV YP_576074.1 810003 D 323097 CDS YP_576075.1 92116346 4031492 complement(810582..811268) 1 NC_007964.1 general secretion pathway protein N 811268 4031492 Nham_0732 Nitrobacter hamburgensis X14 general secretion pathway protein N YP_576075.1 810582 R 323097 CDS YP_576076.1 92116347 4031493 complement(811265..811822) 1 NC_007964.1 general secretion pathway protein M 811822 4031493 Nham_0733 Nitrobacter hamburgensis X14 general secretion pathway protein M YP_576076.1 811265 R 323097 CDS YP_576077.1 92116348 4031494 complement(811819..812877) 1 NC_007964.1 fimbrial assembly 812877 4031494 Nham_0734 Nitrobacter hamburgensis X14 fimbrial assembly YP_576077.1 811819 R 323097 CDS YP_576078.1 92116349 4031495 complement(812903..813817) 1 NC_007964.1 general secretory pathway protein K 813817 4031495 Nham_0735 Nitrobacter hamburgensis X14 general secretory pathway protein K YP_576078.1 812903 R 323097 CDS YP_576079.1 92116350 4031496 complement(813814..814551) 1 NC_007964.1 general secretion pathway protein J 814551 4031496 Nham_0736 Nitrobacter hamburgensis X14 general secretion pathway protein J YP_576079.1 813814 R 323097 CDS YP_576080.1 92116351 4031497 complement(814548..814964) 1 NC_007964.1 general secretion pathway protein I 814964 4031497 Nham_0737 Nitrobacter hamburgensis X14 general secretion pathway protein I YP_576080.1 814548 R 323097 CDS YP_576081.1 92116352 4031498 complement(814936..815409) 1 NC_007964.1 general secretion pathway protein H 815409 4031498 Nham_0738 Nitrobacter hamburgensis X14 general secretion pathway protein H YP_576081.1 814936 R 323097 CDS YP_576082.1 92116353 4031499 complement(815406..815900) 1 NC_007964.1 general secretion pathway protein G 815900 4031499 Nham_0739 Nitrobacter hamburgensis X14 general secretion pathway protein G YP_576082.1 815406 R 323097 CDS YP_576083.1 92116354 4031500 complement(815918..817129) 1 NC_007964.1 type II secretion system protein 817129 4031500 Nham_0740 Nitrobacter hamburgensis X14 type II secretion system protein YP_576083.1 815918 R 323097 CDS YP_576084.1 92116355 4031501 complement(817140..818849) 1 NC_007964.1 type II secretion system protein E 818849 4031501 Nham_0741 Nitrobacter hamburgensis X14 type II secretion system protein E YP_576084.1 817140 R 323097 CDS YP_576085.1 92116356 4031502 819160..821481 1 NC_007964.1 type II and III secretion system protein 821481 4031502 Nham_0742 Nitrobacter hamburgensis X14 type II and III secretion system protein YP_576085.1 819160 D 323097 CDS YP_576086.1 92116357 4031503 821453..822001 1 NC_007964.1 Sel1-like 822001 4031503 Nham_0743 Nitrobacter hamburgensis X14 Sel1-like YP_576086.1 821453 D 323097 CDS YP_576087.1 92116358 4031504 822824..823753 1 NC_007964.1 hypothetical protein 823753 4031504 Nham_0744 Nitrobacter hamburgensis X14 hypothetical protein YP_576087.1 822824 D 323097 CDS YP_576088.1 92116359 4031429 complement(824323..824919) 1 NC_007964.1 molybdate ABC transporter periplasmic molybdate-binding protein 824919 4031429 Nham_0745 Nitrobacter hamburgensis X14 molybdate ABC transporter periplasmic molybdate-binding protein YP_576088.1 824323 R 323097 CDS YP_576089.1 92116360 4031430 complement(824999..827323) 1 NC_007964.1 TonB-dependent siderophore receptor 827323 4031430 Nham_0746 Nitrobacter hamburgensis X14 TonB-dependent siderophore receptor YP_576089.1 824999 R 323097 CDS YP_576090.1 92116361 4031431 827532..828545 1 NC_007964.1 MotA/TolQ/ExbB proton channel 828545 4031431 Nham_0747 Nitrobacter hamburgensis X14 MotA/TolQ/ExbB proton channel YP_576090.1 827532 D 323097 CDS YP_576091.1 92116362 4031432 828552..829010 1 NC_007964.1 biopolymer transport protein ExbD/TolR 829010 4031432 Nham_0748 Nitrobacter hamburgensis X14 biopolymer transport protein ExbD/TolR YP_576091.1 828552 D 323097 CDS YP_576092.1 92116363 4031433 829007..829816 1 NC_007964.1 TonB-like protein 829816 4031433 Nham_0749 Nitrobacter hamburgensis X14 TonB-like protein YP_576092.1 829007 D 323097 CDS YP_576093.1 92116364 4031435 830274..832019 1 NC_007964.1 sodium/hydrogen exchanger 832019 4031435 Nham_0751 Nitrobacter hamburgensis X14 sodium/hydrogen exchanger YP_576093.1 830274 D 323097 CDS YP_576094.1 92116365 4031436 832368..833444 1 NC_007964.1 3,4-dihydroxy-2-butanone 4-phosphate synthase 833444 4031436 Nham_0752 Nitrobacter hamburgensis X14 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_576094.1 832368 D 323097 CDS YP_576095.1 92116366 4031437 833593..834807 1 NC_007964.1 acyl-CoA dehydrogenase 834807 4031437 Nham_0753 Nitrobacter hamburgensis X14 acyl-CoA dehydrogenase YP_576095.1 833593 D 323097 CDS YP_576096.1 92116367 4031438 835003..835950 1 NC_007964.1 beta-lactamase-like 835950 4031438 Nham_0754 Nitrobacter hamburgensis X14 beta-lactamase-like YP_576096.1 835003 D 323097 CDS YP_576097.1 92116368 4031439 complement(836047..836901) 1 NC_007964.1 hypothetical protein 836901 4031439 Nham_0755 Nitrobacter hamburgensis X14 hypothetical protein YP_576097.1 836047 R 323097 CDS YP_576098.1 92116369 4031440 complement(837054..837971) 1 NC_007964.1 LysR family transcriptional regulator 837971 4031440 Nham_0756 Nitrobacter hamburgensis X14 LysR family transcriptional regulator YP_576098.1 837054 R 323097 CDS YP_576099.1 92116370 4031441 838086..838952 1 NC_007964.1 Pirin-like protein 838952 4031441 Nham_0757 Nitrobacter hamburgensis X14 Pirin-like protein YP_576099.1 838086 D 323097 CDS YP_576100.1 92116371 4031443 complement(839687..841315) 1 NC_007964.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 841315 4031443 Nham_0759 Nitrobacter hamburgensis X14 acyl-CoA synthetase YP_576100.1 839687 R 323097 CDS YP_576101.1 92116372 4031444 841372..842499 1 NC_007964.1 extensin-like 842499 4031444 Nham_0760 Nitrobacter hamburgensis X14 extensin-like YP_576101.1 841372 D 323097 CDS YP_576102.1 92116373 4031445 complement(842563..843312) 1 NC_007964.1 ErfK/YbiS/YcfS/YnhG protein 843312 4031445 Nham_0761 Nitrobacter hamburgensis X14 ErfK/YbiS/YcfS/YnhG protein YP_576102.1 842563 R 323097 CDS YP_576103.1 92116374 4031446 843602..844582 1 NC_007964.1 Mg2+ transporter protein, CorA-like 844582 4031446 Nham_0762 Nitrobacter hamburgensis X14 Mg2+ transporter protein, CorA-like YP_576103.1 843602 D 323097 CDS YP_576104.1 92116375 4031447 complement(844692..844943) 1 NC_007964.1 hypothetical protein 844943 4031447 Nham_0763 Nitrobacter hamburgensis X14 hypothetical protein YP_576104.1 844692 R 323097 CDS YP_576105.1 92116376 4031448 complement(845155..845949) 1 NC_007964.1 short-chain dehydrogenase/reductase SDR 845949 4031448 Nham_0764 Nitrobacter hamburgensis X14 short-chain dehydrogenase/reductase SDR YP_576105.1 845155 R 323097 CDS YP_576106.1 92116377 4031449 complement(845946..846587) 1 NC_007964.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 846587 4031449 Nham_0765 Nitrobacter hamburgensis X14 pyridoxamine 5'-phosphate oxidase YP_576106.1 845946 R 323097 CDS YP_576107.1 92116378 4031450 846712..847110 1 NC_007964.1 hypothetical protein 847110 4031450 Nham_0766 Nitrobacter hamburgensis X14 hypothetical protein YP_576107.1 846712 D 323097 CDS YP_576108.1 92116379 4031451 847309..848268 1 NC_007964.1 chaperone DnaJ-like protein 848268 4031451 Nham_0767 Nitrobacter hamburgensis X14 chaperone DnaJ-like protein YP_576108.1 847309 D 323097 CDS YP_576109.1 92116380 4031452 complement(848442..849260) 1 NC_007964.1 alpha/beta hydrolase 849260 4031452 Nham_0768 Nitrobacter hamburgensis X14 alpha/beta hydrolase YP_576109.1 848442 R 323097 CDS YP_576110.1 92116381 4031453 849498..850091 1 NC_007964.1 phosphoglycerate mutase 850091 4031453 Nham_0769 Nitrobacter hamburgensis X14 phosphoglycerate mutase YP_576110.1 849498 D 323097 CDS YP_576111.1 92116382 4031454 850232..851332 1 NC_007964.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 851332 4031454 Nham_0770 Nitrobacter hamburgensis X14 chorismate synthase YP_576111.1 850232 D 323097 CDS YP_576112.1 92116383 4031455 complement(851396..851701) 1 NC_007964.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor 851701 clpS 4031455 clpS Nitrobacter hamburgensis X14 ATP-dependent Clp protease adaptor YP_576112.1 851396 R 323097 CDS YP_576113.1 92116384 4031456 complement(851937..853622) 1 NC_007964.1 methyl-accepting chemotaxis sensory transducer 853622 4031456 Nham_0772 Nitrobacter hamburgensis X14 methyl-accepting chemotaxis sensory transducer YP_576113.1 851937 R 323097 CDS YP_576114.1 92116385 4031458 complement(854422..854745) 1 NC_007964.1 ArsR family transcriptional regulator 854745 4031458 Nham_0774 Nitrobacter hamburgensis X14 ArsR family transcriptional regulator YP_576114.1 854422 R 323097 CDS YP_576115.1 92116386 4031460 complement(856170..857414) 1 NC_007964.1 RNA methyltransferase 857414 4031460 Nham_0776 Nitrobacter hamburgensis X14 RNA methyltransferase YP_576115.1 856170 R 323097 CDS YP_576116.1 92116387 4031461 complement(857538..858293) 1 NC_007964.1 hemolysin A 858293 4031461 Nham_0777 Nitrobacter hamburgensis X14 hemolysin A YP_576116.1 857538 R 323097 CDS YP_576117.1 92116388 4031462 complement(858519..860525) 1 NC_007964.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 860525 4031462 Nham_0778 Nitrobacter hamburgensis X14 1-deoxy-D-xylulose-5-phosphate synthase YP_576117.1 858519 R 323097 CDS YP_576118.1 92116389 4031463 complement(861021..861272) 1 NC_007964.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 861272 4031463 Nham_0779 Nitrobacter hamburgensis X14 exodeoxyribonuclease VII small subunit YP_576118.1 861021 R 323097 CDS YP_576119.1 92116390 4031464 complement(861343..862272) 1 NC_007964.1 histone deacetylase superfamily protein 862272 4031464 Nham_0780 Nitrobacter hamburgensis X14 histone deacetylase superfamily protein YP_576119.1 861343 R 323097 CDS YP_576120.1 92116391 4031465 complement(862379..863173) 1 NC_007964.1 enoyl-CoA hydratase/isomerase 863173 4031465 Nham_0781 Nitrobacter hamburgensis X14 enoyl-CoA hydratase/isomerase YP_576120.1 862379 R 323097 CDS YP_576121.1 92116392 4031466 complement(863170..864954) 1 NC_007964.1 acyl-CoA dehydrogenase 864954 4031466 Nham_0782 Nitrobacter hamburgensis X14 acyl-CoA dehydrogenase YP_576121.1 863170 R 323097 CDS YP_576122.1 92116393 4032340 865624..866124 1 NC_007964.1 3-demethylubiquinone-9 3-methyltransferase 866124 4032340 Nham_0783 Nitrobacter hamburgensis X14 3-demethylubiquinone-9 3-methyltransferase YP_576122.1 865624 D 323097 CDS YP_576123.1 92116394 4032341 complement(866430..868319) 1 NC_007964.1 hypothetical protein 868319 4032341 Nham_0784 Nitrobacter hamburgensis X14 hypothetical protein YP_576123.1 866430 R 323097 CDS YP_576124.1 92116395 4032342 complement(868331..870322) 1 NC_007964.1 hypothetical protein 870322 4032342 Nham_0785 Nitrobacter hamburgensis X14 hypothetical protein YP_576124.1 868331 R 323097 CDS YP_576125.1 92116396 4032343 complement(870319..871017) 1 NC_007964.1 hypothetical protein 871017 4032343 Nham_0786 Nitrobacter hamburgensis X14 hypothetical protein YP_576125.1 870319 R 323097 CDS YP_576126.1 92116397 4032345 complement(871934..872797) 1 NC_007964.1 IstB-like ATP-binding protein 872797 4032345 Nham_0788 Nitrobacter hamburgensis X14 IstB-like ATP-binding protein YP_576126.1 871934 R 323097 CDS YP_576127.1 92116398 4032346 complement(872797..874296) 1 NC_007964.1 integrase catalytic subunit 874296 4032346 Nham_0789 Nitrobacter hamburgensis X14 integrase catalytic subunit YP_576127.1 872797 R 323097 CDS YP_576128.1 92116399 4032347 complement(874354..874746) 1 NC_007964.1 hypothetical protein 874746 4032347 Nham_0790 Nitrobacter hamburgensis X14 hypothetical protein YP_576128.1 874354 R 323097 CDS YP_576129.1 92116400 4032348 complement(875056..876624) 1 NC_007964.1 hypothetical protein 876624 4032348 Nham_0791 Nitrobacter hamburgensis X14 hypothetical protein YP_576129.1 875056 R 323097 CDS YP_576130.1 92116401 4032349 complement(876621..877553) 1 NC_007964.1 sugar kinase 877553 4032349 Nham_0792 Nitrobacter hamburgensis X14 sugar kinase YP_576130.1 876621 R 323097 CDS YP_576131.1 92116402 4032350 complement(877609..878361) 1 NC_007964.1 hypothetical protein 878361 4032350 Nham_0793 Nitrobacter hamburgensis X14 hypothetical protein YP_576131.1 877609 R 323097 CDS YP_576132.1 92116403 4032351 878549..879661 1 NC_007964.1 hypothetical protein 879661 4032351 Nham_0794 Nitrobacter hamburgensis X14 hypothetical protein YP_576132.1 878549 D 323097 CDS YP_576133.1 92116404 4032352 879661..880212 1 NC_007964.1 hypothetical protein 880212 4032352 Nham_0795 Nitrobacter hamburgensis X14 hypothetical protein YP_576133.1 879661 D 323097 CDS YP_576134.1 92116405 4032353 complement(880503..882023) 1 NC_007964.1 resolvase-like protein 882023 4032353 Nham_0796 Nitrobacter hamburgensis X14 resolvase-like protein YP_576134.1 880503 R 323097 CDS YP_576135.1 92116406 4032354 complement(882013..882510) 1 NC_007964.1 hypothetical protein 882510 4032354 Nham_0797 Nitrobacter hamburgensis X14 hypothetical protein YP_576135.1 882013 R 323097 CDS YP_576136.1 92116407 4032355 complement(882507..882860) 1 NC_007964.1 hypothetical protein 882860 4032355 Nham_0798 Nitrobacter hamburgensis X14 hypothetical protein YP_576136.1 882507 R 323097 CDS YP_576137.1 92116408 4032356 complement(882957..883271) 1 NC_007964.1 hypothetical protein 883271 4032356 Nham_0799 Nitrobacter hamburgensis X14 hypothetical protein YP_576137.1 882957 R 323097 CDS YP_576138.1 92116409 4032357 complement(883319..883612) 1 NC_007964.1 XRE family transcriptional regulator 883612 4032357 Nham_0800 Nitrobacter hamburgensis X14 XRE family transcriptional regulator YP_576138.1 883319 R 323097 CDS YP_576139.1 92116410 4032358 complement(884010..885410) 1 NC_007964.1 phage protein 885410 4032358 Nham_0801 Nitrobacter hamburgensis X14 phage protein YP_576139.1 884010 R 323097 CDS YP_576140.1 92116411 4032068 complement(885400..885891) 1 NC_007964.1 hypothetical protein 885891 4032068 Nham_0802 Nitrobacter hamburgensis X14 hypothetical protein YP_576140.1 885400 R 323097 CDS YP_576141.1 92116412 4032069 complement(885888..887198) 1 NC_007964.1 DNA methylase N-4/N-6 887198 4032069 Nham_0803 Nitrobacter hamburgensis X14 DNA methylase N-4/N-6 YP_576141.1 885888 R 323097 CDS YP_576142.1 92116413 4032070 complement(887942..889441) 1 NC_007964.1 catalase 889441 4032070 Nham_0804 Nitrobacter hamburgensis X14 catalase YP_576142.1 887942 R 323097 CDS YP_576143.1 92116414 4032073 890815..891153 1 NC_007964.1 transposase 891153 4032073 Nham_0807 Nitrobacter hamburgensis X14 transposase YP_576143.1 890815 D 323097 CDS YP_576144.1 92116415 4032074 891241..892269 1 NC_007964.1 transposase IS116/IS110/IS902 892269 4032074 Nham_0808 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_576144.1 891241 D 323097 CDS YP_576145.1 92116416 4032075 complement(892536..893648) 1 NC_007964.1 transposase 893648 4032075 Nham_0809 Nitrobacter hamburgensis X14 transposase YP_576145.1 892536 R 323097 CDS YP_576146.1 92116417 4032076 complement(893963..894172) 1 NC_007964.1 cold-shock DNA-binding domain-containing protein 894172 4032076 Nham_0810 Nitrobacter hamburgensis X14 cold-shock DNA-binding domain-containing protein YP_576146.1 893963 R 323097 CDS YP_576147.1 92116418 4032077 894438..894689 1 NC_007964.1 hypothetical protein 894689 4032077 Nham_0811 Nitrobacter hamburgensis X14 hypothetical protein YP_576147.1 894438 D 323097 CDS YP_576148.1 92116419 4032078 894686..894937 1 NC_007964.1 hypothetical protein 894937 4032078 Nham_0812 Nitrobacter hamburgensis X14 hypothetical protein YP_576148.1 894686 D 323097 CDS YP_576149.1 92116420 4032079 894984..895112 1 NC_007964.1 hypothetical protein 895112 4032079 Nham_0813 Nitrobacter hamburgensis X14 hypothetical protein YP_576149.1 894984 D 323097 CDS YP_576150.1 92116421 4032080 complement(895377..896732) 1 NC_007964.1 phage protein 896732 4032080 Nham_0814 Nitrobacter hamburgensis X14 phage protein YP_576150.1 895377 R 323097 CDS YP_576151.1 92116422 4032081 complement(896725..897162) 1 NC_007964.1 hypothetical protein 897162 4032081 Nham_0815 Nitrobacter hamburgensis X14 hypothetical protein YP_576151.1 896725 R 323097 CDS YP_576152.1 92116423 4032082 complement(897553..897822) 1 NC_007964.1 hypothetical protein 897822 4032082 Nham_0816 Nitrobacter hamburgensis X14 hypothetical protein YP_576152.1 897553 R 323097 CDS YP_576153.1 92116424 4032083 complement(898050..899513) 1 NC_007964.1 hypothetical protein 899513 4032083 Nham_0817 Nitrobacter hamburgensis X14 hypothetical protein YP_576153.1 898050 R 323097 CDS YP_576154.1 92116425 4032084 complement(899524..901758) 1 NC_007964.1 hypothetical protein 901758 4032084 Nham_0818 Nitrobacter hamburgensis X14 hypothetical protein YP_576154.1 899524 R 323097 CDS YP_576155.1 92116426 4032085 complement(901769..904861) 1 NC_007964.1 hypothetical protein 904861 4032085 Nham_0819 Nitrobacter hamburgensis X14 hypothetical protein YP_576155.1 901769 R 323097 CDS YP_576156.1 92116427 4032086 complement(904858..908364) 1 NC_007964.1 hypothetical protein 908364 4032086 Nham_0820 Nitrobacter hamburgensis X14 hypothetical protein YP_576156.1 904858 R 323097 CDS YP_576157.1 92116428 4032688 complement(908424..909032) 1 NC_007964.1 hypothetical protein 909032 4032688 Nham_0821 Nitrobacter hamburgensis X14 hypothetical protein YP_576157.1 908424 R 323097 CDS YP_576158.1 92116429 4032689 complement(909045..910160) 1 NC_007964.1 hypothetical protein 910160 4032689 Nham_0822 Nitrobacter hamburgensis X14 hypothetical protein YP_576158.1 909045 R 323097 CDS YP_576159.1 92116430 4032690 complement(910164..910511) 1 NC_007964.1 hypothetical protein 910511 4032690 Nham_0823 Nitrobacter hamburgensis X14 hypothetical protein YP_576159.1 910164 R 323097 CDS YP_576160.1 92116431 4032691 complement(910523..911179) 1 NC_007964.1 hypothetical protein 911179 4032691 Nham_0824 Nitrobacter hamburgensis X14 hypothetical protein YP_576160.1 910523 R 323097 CDS YP_576161.1 92116432 4032692 complement(911176..913905) 1 NC_007964.1 hypothetical protein 913905 4032692 Nham_0825 Nitrobacter hamburgensis X14 hypothetical protein YP_576161.1 911176 R 323097 CDS YP_576162.1 92116433 4032693 complement(913902..916592) 1 NC_007964.1 hypothetical protein 916592 4032693 Nham_0826 Nitrobacter hamburgensis X14 hypothetical protein YP_576162.1 913902 R 323097 CDS YP_576163.1 92116434 4032694 complement(916876..918969) 1 NC_007964.1 ATPase AAA 918969 4032694 Nham_0827 Nitrobacter hamburgensis X14 ATPase AAA YP_576163.1 916876 R 323097 CDS YP_576164.1 92116435 4032695 complement(918966..920285) 1 NC_007964.1 hypothetical protein 920285 4032695 Nham_0828 Nitrobacter hamburgensis X14 hypothetical protein YP_576164.1 918966 R 323097 CDS YP_576165.1 92116436 4032696 complement(920282..921019) 1 NC_007964.1 hypothetical protein 921019 4032696 Nham_0829 Nitrobacter hamburgensis X14 hypothetical protein YP_576165.1 920282 R 323097 CDS YP_576166.1 92116437 4032697 complement(921016..921729) 1 NC_007964.1 hypothetical protein 921729 4032697 Nham_0830 Nitrobacter hamburgensis X14 hypothetical protein YP_576166.1 921016 R 323097 CDS YP_576167.1 92116438 4032698 complement(921741..922265) 1 NC_007964.1 hypothetical protein 922265 4032698 Nham_0831 Nitrobacter hamburgensis X14 hypothetical protein YP_576167.1 921741 R 323097 CDS YP_576168.1 92116439 4032699 complement(922281..924215) 1 NC_007964.1 phage tail sheath protein 924215 4032699 Nham_0832 Nitrobacter hamburgensis X14 phage tail sheath protein YP_576168.1 922281 R 323097 CDS YP_576169.1 92116440 4032701 925124..926155 1 NC_007964.1 transposase IS116/IS110/IS902 926155 4032701 Nham_0834 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_576169.1 925124 D 323097 CDS YP_576170.1 92116441 4032702 complement(926369..926746) 1 NC_007964.1 transposase IS3/IS911 926746 4032702 Nham_0835 Nitrobacter hamburgensis X14 transposase IS3/IS911 YP_576170.1 926369 R 323097 CDS YP_576171.1 92116442 4032703 926998..931308 1 NC_007964.1 hypothetical protein 931308 4032703 Nham_0836 Nitrobacter hamburgensis X14 hypothetical protein YP_576171.1 926998 D 323097 CDS YP_576172.1 92116443 4032705 complement(934126..934479) 1 NC_007964.1 hypothetical protein 934479 4032705 Nham_0838 Nitrobacter hamburgensis X14 hypothetical protein YP_576172.1 934126 R 323097 CDS YP_576173.1 92116444 4031661 complement(936317..936808) 1 NC_007964.1 hypothetical protein 936808 4031661 Nham_0841 Nitrobacter hamburgensis X14 hypothetical protein YP_576173.1 936317 R 323097 CDS YP_576174.1 92116445 4031663 complement(938870..940369) 1 NC_007964.1 catalase 940369 4031663 Nham_0843 Nitrobacter hamburgensis X14 catalase YP_576174.1 938870 R 323097 CDS YP_576175.1 92116446 4031665 complement(940937..942490) 1 NC_007964.1 phospholipase D/transphosphatidylase 942490 4031665 Nham_0845 Nitrobacter hamburgensis X14 phospholipase D/transphosphatidylase YP_576175.1 940937 R 323097 CDS YP_576176.1 92116447 4031666 942661..943539 1 NC_007964.1 endonuclease/exonuclease/phosphatase 943539 4031666 Nham_0846 Nitrobacter hamburgensis X14 endonuclease/exonuclease/phosphatase YP_576176.1 942661 D 323097 CDS YP_576177.1 92116448 4031667 944092..944961 1 NC_007964.1 LysR family transcriptional regulator 944961 4031667 Nham_0847 Nitrobacter hamburgensis X14 LysR family transcriptional regulator YP_576177.1 944092 D 323097 CDS YP_576178.1 92116449 4031669 945356..945817 1 NC_007964.1 MaoC-like dehydratase 945817 4031669 Nham_0849 Nitrobacter hamburgensis X14 MaoC-like dehydratase YP_576178.1 945356 D 323097 CDS YP_576179.1 92116450 4031670 complement(945958..946206) 1 NC_007964.1 hypothetical protein 946206 4031670 Nham_0850 Nitrobacter hamburgensis X14 hypothetical protein YP_576179.1 945958 R 323097 CDS YP_576180.1 92116451 4031671 complement(946219..947181) 1 NC_007964.1 alpha/beta hydrolase fold 947181 4031671 Nham_0851 Nitrobacter hamburgensis X14 alpha/beta hydrolase fold YP_576180.1 946219 R 323097 CDS YP_576181.1 92116452 4031672 complement(947215..947526) 1 NC_007964.1 hypothetical protein 947526 4031672 Nham_0852 Nitrobacter hamburgensis X14 hypothetical protein YP_576181.1 947215 R 323097 CDS YP_576182.1 92116453 4031673 947592..948035 1 NC_007964.1 hypothetical protein 948035 4031673 Nham_0853 Nitrobacter hamburgensis X14 hypothetical protein YP_576182.1 947592 D 323097 CDS YP_576183.1 92116454 4031674 complement(948228..949223) 1 NC_007964.1 catalase-like 949223 4031674 Nham_0854 Nitrobacter hamburgensis X14 catalase-like YP_576183.1 948228 R 323097 CDS YP_576184.1 92116455 4031676 complement(949975..950391) 1 NC_007964.1 transposase IS3/IS911 950391 4031676 Nham_0856 Nitrobacter hamburgensis X14 transposase IS3/IS911 YP_576184.1 949975 R 323097 CDS YP_576185.1 92116456 4031678 complement(951001..951870) 1 NC_007964.1 phage integrase 951870 4031678 Nham_0858 Nitrobacter hamburgensis X14 phage integrase YP_576185.1 951001 R 323097 CDS YP_576186.1 92116457 4031679 952111..952623 1 NC_007964.1 XRE family transcriptional regulator 952623 4031679 Nham_0859 Nitrobacter hamburgensis X14 XRE family transcriptional regulator YP_576186.1 952111 D 323097 CDS YP_576187.1 92116458 4031410 complement(954230..954751) 1 NC_007964.1 N-acetyltransferase GCN5 954751 4031410 Nham_0861 Nitrobacter hamburgensis X14 N-acetyltransferase GCN5 YP_576187.1 954230 R 323097 CDS YP_576188.1 92116459 4031411 954911..955993 1 NC_007964.1 hypothetical protein 955993 4031411 Nham_0862 Nitrobacter hamburgensis X14 hypothetical protein YP_576188.1 954911 D 323097 CDS YP_576189.1 92116460 4031412 956071..958299 1 NC_007964.1 hypothetical protein 958299 4031412 Nham_0863 Nitrobacter hamburgensis X14 hypothetical protein YP_576189.1 956071 D 323097 CDS YP_576190.1 92116461 4031413 958329..959300 1 NC_007964.1 catalyzes the formation of acetyl phosphate from acetyl-CoA and phosphate; can also act with other short-chain acyl-CoAs; phosphate acetyltransferase 959300 4031413 Nham_0864 Nitrobacter hamburgensis X14 phosphate acetyltransferase YP_576190.1 958329 D 323097 CDS YP_576191.1 92116462 4031414 959306..960520 1 NC_007964.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 960520 4031414 Nham_0865 Nitrobacter hamburgensis X14 acetate kinase YP_576191.1 959306 D 323097 CDS YP_576192.1 92116463 4031415 960517..961305 1 NC_007964.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 961305 4031415 Nham_0866 Nitrobacter hamburgensis X14 enoyl-ACP reductase YP_576192.1 960517 D 323097 CDS YP_576193.1 92116464 4031416 complement(961412..962062) 1 NC_007964.1 3-oxoacid CoA-transferase subunit B 962062 4031416 Nham_0867 Nitrobacter hamburgensis X14 3-oxoacid CoA-transferase subunit B YP_576193.1 961412 R 323097 CDS YP_576194.1 92116465 4031417 complement(962066..962713) 1 NC_007964.1 3-oxoacid CoA-transferase subunit A 962713 4031417 Nham_0868 Nitrobacter hamburgensis X14 3-oxoacid CoA-transferase subunit A YP_576194.1 962066 R 323097 CDS YP_576195.1 92116466 4031419 complement(963266..963949) 1 NC_007964.1 transcriptional regulator that positively regulated fixLJ operon; upregulated transcription by FixJ; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes; transcriptional regulator FixK 963949 fixK 4031419 fixK Nitrobacter hamburgensis X14 transcriptional regulator FixK YP_576195.1 963266 R 323097 CDS YP_576196.1 92116467 4031420 964206..965300 1 NC_007964.1 tISRso5; ISRSO5-transposase protein 965300 4031420 Nham_0871 Nitrobacter hamburgensis X14 tISRso5; ISRSO5-transposase protein YP_576196.1 964206 D 323097 CDS YP_576197.1 92116468 4031421 965473..966105 1 NC_007964.1 two component LuxR family transcriptional regulator 966105 4031421 Nham_0872 Nitrobacter hamburgensis X14 two component LuxR family transcriptional regulator YP_576197.1 965473 D 323097 CDS YP_576198.1 92116469 4031422 966259..966666 1 NC_007964.1 response regulator receiver domain-containing protein 966666 4031422 Nham_0873 Nitrobacter hamburgensis X14 response regulator receiver domain-containing protein YP_576198.1 966259 D 323097 CDS YP_576199.1 92116470 4031423 966894..967571 1 NC_007964.1 hypothetical protein 967571 4031423 Nham_0874 Nitrobacter hamburgensis X14 hypothetical protein YP_576199.1 966894 D 323097 CDS YP_576200.1 92116471 4031424 967568..969298 1 NC_007964.1 sulfate transporter 969298 4031424 Nham_0875 Nitrobacter hamburgensis X14 sulfate transporter YP_576200.1 967568 D 323097 CDS YP_576201.1 92116472 4031425 969557..969991 1 NC_007964.1 hypothetical protein 969991 4031425 Nham_0876 Nitrobacter hamburgensis X14 hypothetical protein YP_576201.1 969557 D 323097 CDS YP_576202.1 92116473 4031426 complement(970033..970866) 1 NC_007964.1 hypothetical protein 970866 4031426 Nham_0877 Nitrobacter hamburgensis X14 hypothetical protein YP_576202.1 970033 R 323097 CDS YP_576203.1 92116474 4031427 complement(970878..971333) 1 NC_007964.1 hypothetical protein 971333 4031427 Nham_0878 Nitrobacter hamburgensis X14 hypothetical protein YP_576203.1 970878 R 323097 CDS YP_576204.1 92116475 4031428 971493..971957 1 NC_007964.1 hypothetical protein 971957 4031428 Nham_0879 Nitrobacter hamburgensis X14 hypothetical protein YP_576204.1 971493 D 323097 CDS YP_576205.1 92116476 4031373 973201..973620 1 NC_007964.1 hypothetical protein 973620 4031373 Nham_0881 Nitrobacter hamburgensis X14 hypothetical protein YP_576205.1 973201 D 323097 CDS YP_576206.1 92116477 4031374 973711..974505 1 NC_007964.1 hypothetical protein 974505 4031374 Nham_0882 Nitrobacter hamburgensis X14 hypothetical protein YP_576206.1 973711 D 323097 CDS YP_576207.1 92116478 4031375 974502..974792 1 NC_007964.1 hypothetical protein 974792 4031375 Nham_0883 Nitrobacter hamburgensis X14 hypothetical protein YP_576207.1 974502 D 323097 CDS YP_576208.1 92116479 4031376 974885..976792 1 NC_007964.1 histidine kinase 976792 4031376 Nham_0884 Nitrobacter hamburgensis X14 histidine kinase YP_576208.1 974885 D 323097 CDS YP_576209.1 92116480 4031377 976914..978539 1 NC_007964.1 hypothetical protein 978539 4031377 Nham_0885 Nitrobacter hamburgensis X14 hypothetical protein YP_576209.1 976914 D 323097 CDS YP_576210.1 92116481 4031378 978536..979462 1 NC_007964.1 hypothetical protein 979462 4031378 Nham_0886 Nitrobacter hamburgensis X14 hypothetical protein YP_576210.1 978536 D 323097 CDS YP_576211.1 92116482 4031380 complement(979924..980148) 1 NC_007964.1 periplasmic nitrate reductase NapE 980148 4031380 Nham_0888 Nitrobacter hamburgensis X14 periplasmic nitrate reductase NapE YP_576211.1 979924 R 323097 CDS YP_576212.1 92116483 4031381 980639..982909 1 NC_007964.1 formate acetyltransferase 982909 4031381 Nham_0889 Nitrobacter hamburgensis X14 formate acetyltransferase YP_576212.1 980639 D 323097 CDS YP_576213.1 92116484 4031382 982923..983750 1 NC_007964.1 pyruvate formate-lyase activating protein 983750 4031382 Nham_0890 Nitrobacter hamburgensis X14 pyruvate formate-lyase activating protein YP_576213.1 982923 D 323097 CDS YP_576214.1 92116485 4031383 983783..985384 1 NC_007964.1 YidE/YbjL duplication 985384 4031383 Nham_0891 Nitrobacter hamburgensis X14 YidE/YbjL duplication YP_576214.1 983783 D 323097 CDS YP_576215.1 92116486 4031384 985604..986014 1 NC_007964.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit epsilon 986014 atpC 4031384 atpC Nitrobacter hamburgensis X14 F0F1 ATP synthase subunit epsilon YP_576215.1 985604 D 323097 CDS YP_576216.1 92116487 4031386 987203..988306 1 NC_007964.1 calcium/proton exchanger 988306 4031386 Nham_0894 Nitrobacter hamburgensis X14 calcium/proton exchanger YP_576216.1 987203 D 323097 CDS YP_576217.1 92116488 4031387 complement(988812..989237) 1 NC_007964.1 hypothetical protein 989237 4031387 Nham_0895 Nitrobacter hamburgensis X14 hypothetical protein YP_576217.1 988812 R 323097 CDS YP_576218.1 92116489 4031388 989800..991449 1 NC_007964.1 hypothetical protein 991449 4031388 Nham_0896 Nitrobacter hamburgensis X14 hypothetical protein YP_576218.1 989800 D 323097 CDS YP_576219.1 92116490 4031389 991671..991976 1 NC_007964.1 hypothetical protein 991976 4031389 Nham_0897 Nitrobacter hamburgensis X14 hypothetical protein YP_576219.1 991671 D 323097 CDS YP_576220.1 92116491 4031390 complement(992160..992453) 1 NC_007964.1 hypothetical protein 992453 4031390 Nham_0898 Nitrobacter hamburgensis X14 hypothetical protein YP_576220.1 992160 R 323097 CDS YP_576221.1 92116492 4031334 complement(994091..994954) 1 NC_007964.1 IstB-like ATP-binding protein 994954 4031334 Nham_0900 Nitrobacter hamburgensis X14 IstB-like ATP-binding protein YP_576221.1 994091 R 323097 CDS YP_576222.1 92116493 4031335 complement(994954..996453) 1 NC_007964.1 integrase catalytic subunit 996453 4031335 Nham_0901 Nitrobacter hamburgensis X14 integrase catalytic subunit YP_576222.1 994954 R 323097 CDS YP_576223.1 92116494 4031338 complement(997452..998687) 1 NC_007964.1 hypothetical protein 998687 4031338 Nham_0904 Nitrobacter hamburgensis X14 hypothetical protein YP_576223.1 997452 R 323097 CDS YP_576224.1 92116495 4031339 complement(998684..999415) 1 NC_007964.1 ABC transporter 999415 4031339 Nham_0905 Nitrobacter hamburgensis X14 ABC transporter YP_576224.1 998684 R 323097 CDS YP_576225.1 92116496 4031340 complement(999430..1000779) 1 NC_007964.1 secretion protein HlyD 1000779 4031340 Nham_0906 Nitrobacter hamburgensis X14 secretion protein HlyD YP_576225.1 999430 R 323097 CDS YP_576226.1 92116497 4031341 1001218..1001571 1 NC_007964.1 hypothetical protein 1001571 4031341 Nham_0907 Nitrobacter hamburgensis X14 hypothetical protein YP_576226.1 1001218 D 323097 CDS YP_576227.1 92116498 4031343 complement(1002819..1004294) 1 NC_007964.1 hypothetical protein 1004294 4031343 Nham_0909 Nitrobacter hamburgensis X14 hypothetical protein YP_576227.1 1002819 R 323097 CDS YP_576228.1 92116499 4031344 1005125..1005718 1 NC_007964.1 carbonic anhydrase 1005718 4031344 Nham_0910 Nitrobacter hamburgensis X14 carbonic anhydrase YP_576228.1 1005125 D 323097 CDS YP_576229.1 92116500 4031345 complement(1006436..1007659) 1 NC_007964.1 6-phosphofructokinase 1007659 4031345 Nham_0911 Nitrobacter hamburgensis X14 6-phosphofructokinase YP_576229.1 1006436 R 323097 CDS YP_576230.1 92116501 4031346 1008131..1009249 1 NC_007964.1 hypothetical protein 1009249 4031346 Nham_0912 Nitrobacter hamburgensis X14 hypothetical protein YP_576230.1 1008131 D 323097 CDS YP_576231.1 92116502 4031347 1009431..1009907 1 NC_007964.1 Ferritin and Dps 1009907 4031347 Nham_0913 Nitrobacter hamburgensis X14 Ferritin and Dps YP_576231.1 1009431 D 323097 CDS YP_576232.1 92116503 4031348 1009992..1012946 1 NC_007964.1 aconitate hydratase 1 1012946 4031348 Nham_0914 Nitrobacter hamburgensis X14 aconitate hydratase 1 YP_576232.1 1009992 D 323097 CDS YP_576233.1 92116504 4031349 1012962..1013432 1 NC_007964.1 glyoxalase/bleomycin resistance protein/dioxygenase 1013432 4031349 Nham_0915 Nitrobacter hamburgensis X14 glyoxalase/bleomycin resistance protein/dioxygenase YP_576233.1 1012962 D 323097 CDS YP_576234.1 92116505 4031350 1013678..1015063 1 NC_007964.1 twin-arginine translocation pathway signal 1015063 4031350 Nham_0916 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_576234.1 1013678 D 323097 CDS YP_576235.1 92116506 4031351 1015069..1015434 1 NC_007964.1 hypothetical protein 1015434 4031351 Nham_0917 Nitrobacter hamburgensis X14 hypothetical protein YP_576235.1 1015069 D 323097 CDS YP_576236.1 92116507 4031352 1015561..1016250 1 NC_007964.1 protein NnrS 1016250 4031352 Nham_0918 Nitrobacter hamburgensis X14 protein NnrS YP_576236.1 1015561 D 323097 CDS YP_576237.1 92116508 4031913 1016320..1016706 1 NC_007964.1 hypothetical protein 1016706 4031913 Nham_0919 Nitrobacter hamburgensis X14 hypothetical protein YP_576237.1 1016320 D 323097 CDS YP_576238.1 92116509 4031914 complement(1016813..1017457) 1 NC_007964.1 maleylacetoacetate isomerase 1017457 4031914 Nham_0920 Nitrobacter hamburgensis X14 maleylacetoacetate isomerase YP_576238.1 1016813 R 323097 CDS YP_576239.1 92116510 4031915 complement(1017473..1018819) 1 NC_007964.1 An oxygenase that acts to open the ring of homogentisate formingmaleylacetoacetate as part of the catabolism of L-tyrosine and L-phenylalanine; homogentisate 1,2-dioxygenase 1018819 4031915 Nham_0921 Nitrobacter hamburgensis X14 homogentisate 1,2-dioxygenase YP_576239.1 1017473 R 323097 CDS YP_576240.1 92116511 4031916 complement(1018824..1019780) 1 NC_007964.1 beta-lactamase-like 1019780 4031916 Nham_0922 Nitrobacter hamburgensis X14 beta-lactamase-like YP_576240.1 1018824 R 323097 CDS YP_576241.1 92116512 4031917 complement(1019777..1020022) 1 NC_007964.1 hypothetical protein 1020022 4031917 Nham_0923 Nitrobacter hamburgensis X14 hypothetical protein YP_576241.1 1019777 R 323097 CDS YP_576242.1 92116513 4031918 complement(1020019..1021644) 1 NC_007964.1 FAD-dependent oxidoreductase 1021644 4031918 Nham_0924 Nitrobacter hamburgensis X14 FAD-dependent oxidoreductase YP_576242.1 1020019 R 323097 CDS YP_576243.1 92116514 4031919 1021709..1021903 1 NC_007964.1 hypothetical protein 1021903 4031919 Nham_0925 Nitrobacter hamburgensis X14 hypothetical protein YP_576243.1 1021709 D 323097 CDS YP_576244.1 92116515 4031920 1021958..1023259 1 NC_007964.1 fumarylacetoacetase 1023259 4031920 Nham_0926 Nitrobacter hamburgensis X14 fumarylacetoacetase YP_576244.1 1021958 D 323097 CDS YP_576245.1 92116516 4031922 1023579..1024568 1 NC_007964.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; phenylacetate-CoA oxygenase subunit PaaA 1024568 paaA 4031922 paaA Nitrobacter hamburgensis X14 phenylacetate-CoA oxygenase subunit PaaA YP_576245.1 1023579 D 323097 CDS YP_576246.1 92116517 4031923 1024623..1024907 1 NC_007964.1 with PaaBCDE catalyzes the hydroxylation of phenylacetyl-CoA; involved in phenylacetate degradation; phenylacetate-CoA oxygenase subunit PaaB 1024907 paaB 4031923 paaB Nitrobacter hamburgensis X14 phenylacetate-CoA oxygenase subunit PaaB YP_576246.1 1024623 D 323097 CDS YP_576247.1 92116518 4031924 1024907..1025758 1 NC_007964.1 phenylacetate-CoA oxygenase, PaaI subunit 1025758 4031924 Nham_0930 Nitrobacter hamburgensis X14 phenylacetate-CoA oxygenase, PaaI subunit YP_576247.1 1024907 D 323097 CDS YP_576248.1 92116519 4031925 1025768..1026292 1 NC_007964.1 phenylacetate-CoA oxygenase, PaaJ subunit 1026292 4031925 Nham_0931 Nitrobacter hamburgensis X14 phenylacetate-CoA oxygenase, PaaJ subunit YP_576248.1 1025768 D 323097 CDS YP_576249.1 92116520 4031926 1026312..1027388 1 NC_007964.1 ferredoxin 1027388 4031926 Nham_0932 Nitrobacter hamburgensis X14 ferredoxin YP_576249.1 1026312 D 323097 CDS YP_576250.1 92116521 4031927 1027407..1028159 1 NC_007964.1 phenylacetic acid catabolic 1028159 4031927 Nham_0933 Nitrobacter hamburgensis X14 phenylacetic acid catabolic YP_576250.1 1027407 D 323097 CDS YP_576251.1 92116522 4031928 1028228..1030303 1 NC_007964.1 catalyzes the ring cleavage reaction in phenylacetate degradation and the formation of 3-hydroxyacyl-CoA from crotonyl-CoA; bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase 1030303 4031928 Nham_0934 Nitrobacter hamburgensis X14 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase YP_576251.1 1028228 D 323097 CDS YP_576252.1 92116523 4031929 complement(1030369..1030968) 1 NC_007964.1 TetR family transcriptional regulator 1030968 4031929 Nham_0935 Nitrobacter hamburgensis X14 TetR family transcriptional regulator YP_576252.1 1030369 R 323097 CDS YP_576253.1 92116524 4031930 complement(1031081..1031398) 1 NC_007964.1 phenylacetate-CoA ligase 1031398 4031930 Nham_0936 Nitrobacter hamburgensis X14 phenylacetate-CoA ligase YP_576253.1 1031081 R 323097 CDS YP_576254.1 92116525 4031931 complement(1031427..1031876) 1 NC_007964.1 phenylacetic acid degradation protein PaaD 1031876 4031931 Nham_0937 Nitrobacter hamburgensis X14 phenylacetic acid degradation protein PaaD YP_576254.1 1031427 R 323097 CDS YP_576255.1 92116526 4031757 complement(1031873..1032655) 1 NC_007964.1 Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; enoyl-CoA hydratase 1032655 4031757 Nham_0938 Nitrobacter hamburgensis X14 enoyl-CoA hydratase YP_576255.1 1031873 R 323097 CDS YP_576256.1 92116527 4031758 1033121..1033381 1 NC_007964.1 hypothetical protein 1033381 4031758 Nham_0939 Nitrobacter hamburgensis X14 hypothetical protein YP_576256.1 1033121 D 323097 CDS YP_576257.1 92116528 4031759 1033712..1034332 1 NC_007964.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1034332 4031759 Nham_0940 Nitrobacter hamburgensis X14 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_576257.1 1033712 D 323097 CDS YP_576258.1 92116529 4031761 1035523..1036062 1 NC_007964.1 hypothetical protein 1036062 4031761 Nham_0942 Nitrobacter hamburgensis X14 hypothetical protein YP_576258.1 1035523 D 323097 CDS YP_576259.1 92116530 4031762 1036359..1043345 1 NC_007964.1 filamentous hemagglutinin-like protein 1043345 4031762 Nham_0943 Nitrobacter hamburgensis X14 filamentous hemagglutinin-like protein YP_576259.1 1036359 D 323097 CDS YP_576260.1 92116531 4031763 complement(1043946..1044341) 1 NC_007964.1 ArsR family transcriptional regulator 1044341 4031763 Nham_0944 Nitrobacter hamburgensis X14 ArsR family transcriptional regulator YP_576260.1 1043946 R 323097 CDS YP_576261.1 92116532 4031764 complement(1044338..1044970) 1 NC_007964.1 alkyl hydroperoxide reductase 1044970 4031764 Nham_0945 Nitrobacter hamburgensis X14 alkyl hydroperoxide reductase YP_576261.1 1044338 R 323097 CDS YP_576262.1 92116533 4031765 1045274..1046161 1 NC_007964.1 beta-lactamase-like 1046161 4031765 Nham_0946 Nitrobacter hamburgensis X14 beta-lactamase-like YP_576262.1 1045274 D 323097 CDS YP_576263.1 92116534 4031766 1046204..1047868 1 NC_007964.1 hypothetical protein 1047868 4031766 Nham_0947 Nitrobacter hamburgensis X14 hypothetical protein YP_576263.1 1046204 D 323097 CDS YP_576264.1 92116535 4031767 1047883..1048662 1 NC_007964.1 hypothetical protein 1048662 4031767 Nham_0948 Nitrobacter hamburgensis X14 hypothetical protein YP_576264.1 1047883 D 323097 CDS YP_576265.1 92116536 4031769 1049571..1049972 1 NC_007964.1 hypothetical protein 1049972 4031769 Nham_0950 Nitrobacter hamburgensis X14 hypothetical protein YP_576265.1 1049571 D 323097 CDS YP_576266.1 92116537 4031770 1050449..1054093 1 NC_007964.1 nitrate reductase subunit alpha 1054093 4031770 Nham_0951 Nitrobacter hamburgensis X14 nitrate reductase subunit alpha YP_576266.1 1050449 D 323097 CDS YP_576267.1 92116538 4031773 1054989..1056059 1 NC_007964.1 transport system permease 1056059 4031773 Nham_0954 Nitrobacter hamburgensis X14 transport system permease YP_576267.1 1054989 D 323097 CDS YP_576268.1 92116539 4031774 1056056..1056871 1 NC_007964.1 ABC transporter 1056871 4031774 Nham_0955 Nitrobacter hamburgensis X14 ABC transporter YP_576268.1 1056056 D 323097 CDS YP_576269.1 92116540 4031775 complement(1056891..1057922) 1 NC_007964.1 periplasmic binding protein 1057922 4031775 Nham_0956 Nitrobacter hamburgensis X14 periplasmic binding protein YP_576269.1 1056891 R 323097 CDS YP_576270.1 92116541 4031776 1058259..1060631 1 NC_007964.1 TonB-dependent receptor 1060631 4031776 Nham_0957 Nitrobacter hamburgensis X14 TonB-dependent receptor YP_576270.1 1058259 D 323097 CDS YP_576271.1 92116542 4031796 complement(1060692..1061777) 1 NC_007964.1 luciferase-like protein 1061777 4031796 Nham_0958 Nitrobacter hamburgensis X14 luciferase-like protein YP_576271.1 1060692 R 323097 CDS YP_576272.1 92116543 4031797 complement(1062152..1062784) 1 NC_007964.1 autoinducer synthesis protein 1062784 4031797 Nham_0959 Nitrobacter hamburgensis X14 autoinducer synthesis protein YP_576272.1 1062152 R 323097 CDS YP_576273.1 92116544 4031798 complement(1063074..1065662) 1 NC_007964.1 peptidase C14, caspase catalytic subunit p20 1065662 4031798 Nham_0960 Nitrobacter hamburgensis X14 peptidase C14, caspase catalytic subunit p20 YP_576273.1 1063074 R 323097 CDS YP_576274.1 92116545 4031799 complement(1065881..1066354) 1 NC_007964.1 hypothetical protein 1066354 4031799 Nham_0961 Nitrobacter hamburgensis X14 hypothetical protein YP_576274.1 1065881 R 323097 CDS YP_576275.1 92116546 4031801 complement(1067893..1068816) 1 NC_007964.1 hypothetical protein 1068816 4031801 Nham_0963 Nitrobacter hamburgensis X14 hypothetical protein YP_576275.1 1067893 R 323097 CDS YP_576276.1 92116547 4031802 complement(1068813..1069538) 1 NC_007964.1 ABC transporter 1069538 4031802 Nham_0964 Nitrobacter hamburgensis X14 ABC transporter YP_576276.1 1068813 R 323097 CDS YP_576277.1 92116548 4031803 1069579..1070130 1 NC_007964.1 ChrB domain-containing protein 1070130 4031803 Nham_0965 Nitrobacter hamburgensis X14 ChrB domain-containing protein YP_576277.1 1069579 D 323097 CDS YP_576278.1 92116549 4031804 1070127..1070414 1 NC_007964.1 hypothetical protein 1070414 4031804 Nham_0966 Nitrobacter hamburgensis X14 hypothetical protein YP_576278.1 1070127 D 323097 CDS YP_576279.1 92116550 4031805 complement(1070613..1071086) 1 NC_007964.1 hypothetical protein 1071086 4031805 Nham_0967 Nitrobacter hamburgensis X14 hypothetical protein YP_576279.1 1070613 R 323097 CDS YP_576280.1 92116551 4031806 complement(1071473..1071751) 1 NC_007964.1 hypothetical protein 1071751 4031806 Nham_0968 Nitrobacter hamburgensis X14 hypothetical protein YP_576280.1 1071473 R 323097 CDS YP_576281.1 92116552 4031807 complement(1072047..1072394) 1 NC_007964.1 hypothetical protein 1072394 4031807 Nham_0969 Nitrobacter hamburgensis X14 hypothetical protein YP_576281.1 1072047 R 323097 CDS YP_576282.1 92116553 4031808 complement(1072418..1073317) 1 NC_007964.1 hypothetical protein 1073317 4031808 Nham_0970 Nitrobacter hamburgensis X14 hypothetical protein YP_576282.1 1072418 R 323097 CDS YP_576283.1 92116554 4031809 complement(1073759..1074904) 1 NC_007964.1 hypothetical protein 1074904 4031809 Nham_0971 Nitrobacter hamburgensis X14 hypothetical protein YP_576283.1 1073759 R 323097 CDS YP_576284.1 92116555 4031810 complement(1074945..1077233) 1 NC_007964.1 TonB-dependent siderophore receptor 1077233 4031810 Nham_0972 Nitrobacter hamburgensis X14 TonB-dependent siderophore receptor YP_576284.1 1074945 R 323097 CDS YP_576285.1 92116556 4031811 complement(1077406..1077648) 1 NC_007964.1 hypothetical protein 1077648 4031811 Nham_0973 Nitrobacter hamburgensis X14 hypothetical protein YP_576285.1 1077406 R 323097 CDS YP_576286.1 92116557 4031812 complement(1077764..1079302) 1 NC_007964.1 SpoVR family protein 1079302 4031812 Nham_0974 Nitrobacter hamburgensis X14 SpoVR family protein YP_576286.1 1077764 R 323097 CDS YP_576287.1 92116558 4031813 complement(1079299..1080618) 1 NC_007964.1 hypothetical protein 1080618 4031813 Nham_0975 Nitrobacter hamburgensis X14 hypothetical protein YP_576287.1 1079299 R 323097 CDS YP_576288.1 92116559 4031814 complement(1080634..1082583) 1 NC_007964.1 serine protein kinase PrkA 1082583 4031814 Nham_0976 Nitrobacter hamburgensis X14 serine protein kinase PrkA YP_576288.1 1080634 R 323097 CDS YP_576289.1 92116560 4031737 complement(1082614..1082913) 1 NC_007964.1 hypothetical protein 1082913 4031737 Nham_0977 Nitrobacter hamburgensis X14 hypothetical protein YP_576289.1 1082614 R 323097 CDS YP_576290.1 92116561 4031739 1083817..1084110 1 NC_007964.1 hypothetical protein 1084110 4031739 Nham_0979 Nitrobacter hamburgensis X14 hypothetical protein YP_576290.1 1083817 D 323097 CDS YP_576291.1 92116562 4031740 1084407..1085240 1 NC_007964.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 1085240 4031740 Nham_0980 Nitrobacter hamburgensis X14 AMP nucleosidase YP_576291.1 1084407 D 323097 CDS YP_576292.1 92116563 4031742 complement(1085473..1086966) 1 NC_007964.1 EmrB/QacA family drug resistance transporter 1086966 4031742 Nham_0982 Nitrobacter hamburgensis X14 EmrB/QacA family drug resistance transporter YP_576292.1 1085473 R 323097 CDS YP_576293.1 92116564 4031743 complement(1087236..1088615) 1 NC_007964.1 type I phosphodiesterase/nucleotide pyrophosphatase 1088615 4031743 Nham_0983 Nitrobacter hamburgensis X14 type I phosphodiesterase/nucleotide pyrophosphatase YP_576293.1 1087236 R 323097 CDS YP_576294.1 92116565 4031744 1088894..1090087 1 NC_007964.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 1090087 aroB 4031744 aroB Nitrobacter hamburgensis X14 3-dehydroquinate synthase YP_576294.1 1088894 D 323097 CDS YP_576295.1 92116566 4031745 1090084..1091286 1 NC_007964.1 hypothetical protein 1091286 4031745 Nham_0985 Nitrobacter hamburgensis X14 hypothetical protein YP_576295.1 1090084 D 323097 CDS YP_576296.1 92116567 4031746 1091283..1092161 1 NC_007964.1 UbiA prenyltransferase 1092161 4031746 Nham_0986 Nitrobacter hamburgensis X14 UbiA prenyltransferase YP_576296.1 1091283 D 323097 CDS YP_576297.1 92116568 4031747 1092170..1093075 1 NC_007964.1 hypothetical protein 1093075 4031747 Nham_0987 Nitrobacter hamburgensis X14 hypothetical protein YP_576297.1 1092170 D 323097 CDS YP_576298.1 92116569 4031748 1093072..1093476 1 NC_007964.1 hypothetical protein 1093476 4031748 Nham_0988 Nitrobacter hamburgensis X14 hypothetical protein YP_576298.1 1093072 D 323097 CDS YP_576299.1 92116570 4031749 1093618..1095045 1 NC_007964.1 hypothetical protein 1095045 4031749 Nham_0989 Nitrobacter hamburgensis X14 hypothetical protein YP_576299.1 1093618 D 323097 CDS YP_576300.1 92116571 4031750 1095164..1095643 1 NC_007964.1 cytochrome c, class I 1095643 4031750 Nham_0990 Nitrobacter hamburgensis X14 cytochrome c, class I YP_576300.1 1095164 D 323097 CDS YP_576301.1 92116572 4031751 1095640..1096782 1 NC_007964.1 TatD-related deoxyribonuclease 1096782 4031751 Nham_0991 Nitrobacter hamburgensis X14 TatD-related deoxyribonuclease YP_576301.1 1095640 D 323097 CDS YP_576302.1 92116573 4031752 1097669..1098817 1 NC_007964.1 secretion protein HlyD 1098817 4031752 Nham_0992 Nitrobacter hamburgensis X14 secretion protein HlyD YP_576302.1 1097669 D 323097 CDS YP_576303.1 92116574 4031753 1098821..1101967 1 NC_007964.1 hydrophobe/amphiphile efflux-1 HAE1 1101967 4031753 Nham_0993 Nitrobacter hamburgensis X14 hydrophobe/amphiphile efflux-1 HAE1 YP_576303.1 1098821 D 323097 CDS YP_576304.1 92116575 4031754 1102066..1102290 1 NC_007964.1 hypothetical protein 1102290 4031754 Nham_0994 Nitrobacter hamburgensis X14 hypothetical protein YP_576304.1 1102066 D 323097 CDS YP_576305.1 92116576 4031755 complement(1102382..1104784) 1 NC_007964.1 glucan 1,4-alpha-glucosidase 1104784 4031755 Nham_0995 Nitrobacter hamburgensis X14 glucan 1,4-alpha-glucosidase YP_576305.1 1102382 R 323097 CDS YP_576306.1 92116577 4031756 complement(1106055..1107410) 1 NC_007964.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 1107410 4031756 Nham_0996 Nitrobacter hamburgensis X14 glutamate dehydrogenase YP_576306.1 1106055 R 323097 CDS YP_576307.1 92116578 4031680 complement(1108156..1109469) 1 NC_007964.1 periplasmic sensor signal transduction histidine kinase 1109469 4031680 Nham_0997 Nitrobacter hamburgensis X14 periplasmic sensor signal transduction histidine kinase YP_576307.1 1108156 R 323097 CDS YP_576308.1 92116579 4031681 complement(1109466..1110128) 1 NC_007964.1 two component transcriptional regulator 1110128 4031681 Nham_0998 Nitrobacter hamburgensis X14 two component transcriptional regulator YP_576308.1 1109466 R 323097 CDS YP_576309.1 92116580 4031682 1110459..1111241 1 NC_007964.1 hypothetical protein 1111241 4031682 Nham_0999 Nitrobacter hamburgensis X14 hypothetical protein YP_576309.1 1110459 D 323097 CDS YP_576310.1 92116581 4031683 1111309..1112067 1 NC_007964.1 hypothetical protein 1112067 4031683 Nham_1000 Nitrobacter hamburgensis X14 hypothetical protein YP_576310.1 1111309 D 323097 CDS YP_576311.1 92116582 4031684 complement(1112207..1112407) 1 NC_007964.1 hypothetical protein 1112407 4031684 Nham_1001 Nitrobacter hamburgensis X14 hypothetical protein YP_576311.1 1112207 R 323097 CDS YP_576312.1 92116583 4031685 complement(1112649..1117112) 1 NC_007964.1 hypothetical protein 1117112 4031685 Nham_1002 Nitrobacter hamburgensis X14 hypothetical protein YP_576312.1 1112649 R 323097 CDS YP_576313.1 92116584 4031687 complement(1119344..1120213) 1 NC_007964.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 1120213 4031687 Nham_1004 Nitrobacter hamburgensis X14 formamidopyrimidine-DNA glycosylase YP_576313.1 1119344 R 323097 CDS YP_576314.1 92116585 4031688 complement(1120383..1120742) 1 NC_007964.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit G 1120742 4031688 Nham_1005 Nitrobacter hamburgensis X14 monovalent cation/H+ antiporter subunit G YP_576314.1 1120383 R 323097 CDS YP_576315.1 92116586 4031689 complement(1120739..1121017) 1 NC_007964.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit F 1121017 4031689 Nham_1006 Nitrobacter hamburgensis X14 monovalent cation/H+ antiporter subunit F YP_576315.1 1120739 R 323097 CDS YP_576316.1 92116587 4031690 complement(1121014..1121502) 1 NC_007964.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit E 1121502 4031690 Nham_1007 Nitrobacter hamburgensis X14 monovalent cation/H+ antiporter subunit E YP_576316.1 1121014 R 323097 CDS YP_576317.1 92116588 4031691 complement(1121499..1123106) 1 NC_007964.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; monovalent cation/H+ antiporter subunit D 1123106 4031691 Nham_1008 Nitrobacter hamburgensis X14 monovalent cation/H+ antiporter subunit D YP_576317.1 1121499 R 323097 CDS YP_576318.1 92116589 4031692 complement(1123103..1123447) 1 NC_007964.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit C 1123447 4031692 Nham_1009 Nitrobacter hamburgensis X14 monovalent cation/H+ antiporter subunit C YP_576318.1 1123103 R 323097 CDS YP_576319.1 92116590 4031693 complement(1123447..1126383) 1 NC_007964.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; monovalent cation/H+ antiporter subunit A 1126383 4031693 Nham_1010 Nitrobacter hamburgensis X14 monovalent cation/H+ antiporter subunit A YP_576319.1 1123447 R 323097 CDS YP_576320.1 92116591 4031695 1131724..1132254 1 NC_007964.1 phage tail Collar 1132254 4031695 Nham_1012 Nitrobacter hamburgensis X14 phage tail Collar YP_576320.1 1131724 D 323097 CDS YP_576321.1 92116592 4031696 1132289..1132819 1 NC_007964.1 phage tail Collar 1132819 4031696 Nham_1013 Nitrobacter hamburgensis X14 phage tail Collar YP_576321.1 1132289 D 323097 CDS YP_576322.1 92116593 4031697 1132864..1133406 1 NC_007964.1 phage tail Collar 1133406 4031697 Nham_1014 Nitrobacter hamburgensis X14 phage tail Collar YP_576322.1 1132864 D 323097 CDS YP_576323.1 92116594 4031698 1133393..1133980 1 NC_007964.1 N-acetyltransferase GCN5 1133980 4031698 Nham_1015 Nitrobacter hamburgensis X14 N-acetyltransferase GCN5 YP_576323.1 1133393 D 323097 CDS YP_576324.1 92116595 4032359 complement(1133973..1134266) 1 NC_007964.1 hypothetical protein 1134266 4032359 Nham_1016 Nitrobacter hamburgensis X14 hypothetical protein YP_576324.1 1133973 R 323097 CDS YP_576325.1 92116596 4032360 1134581..1136731 1 NC_007964.1 multicopper oxidase, type 2 1136731 4032360 Nham_1017 Nitrobacter hamburgensis X14 multicopper oxidase, type 2 YP_576325.1 1134581 D 323097 CDS YP_576326.1 92116597 4032361 1136718..1138718 1 NC_007964.1 tyrosinase 1138718 4032361 Nham_1018 Nitrobacter hamburgensis X14 tyrosinase YP_576326.1 1136718 D 323097 CDS YP_576327.1 92116598 4032362 1138758..1141403 1 NC_007964.1 hypothetical protein 1141403 4032362 Nham_1019 Nitrobacter hamburgensis X14 hypothetical protein YP_576327.1 1138758 D 323097 CDS YP_576328.1 92116599 4032363 1141406..1141822 1 NC_007964.1 hypothetical protein 1141822 4032363 Nham_1020 Nitrobacter hamburgensis X14 hypothetical protein YP_576328.1 1141406 D 323097 CDS YP_576329.1 92116600 4032364 1141803..1142981 1 NC_007964.1 FAD dependent oxidoreductase 1142981 4032364 Nham_1021 Nitrobacter hamburgensis X14 FAD dependent oxidoreductase YP_576329.1 1141803 D 323097 CDS YP_576330.1 92116601 4032365 complement(1143010..1143195) 1 NC_007964.1 hypothetical protein 1143195 4032365 Nham_1022 Nitrobacter hamburgensis X14 hypothetical protein YP_576330.1 1143010 R 323097 CDS YP_576331.1 92116602 4032366 complement(1144020..1144517) 1 NC_007964.1 signal peptide protein 1144517 4032366 Nham_1023 Nitrobacter hamburgensis X14 signal peptide protein YP_576331.1 1144020 R 323097 CDS YP_576332.1 92116603 4032367 complement(1144514..1145722) 1 NC_007964.1 BNR repeat-containing glycosyl hydrolase 1145722 4032367 Nham_1024 Nitrobacter hamburgensis X14 BNR repeat-containing glycosyl hydrolase YP_576332.1 1144514 R 323097 CDS YP_576333.1 92116604 4032368 complement(1145739..1148114) 1 NC_007964.1 TonB-dependent receptor 1148114 4032368 Nham_1025 Nitrobacter hamburgensis X14 TonB-dependent receptor YP_576333.1 1145739 R 323097 CDS YP_576334.1 92116605 4032369 complement(1148211..1148576) 1 NC_007964.1 hypothetical protein 1148576 4032369 Nham_1026 Nitrobacter hamburgensis X14 hypothetical protein YP_576334.1 1148211 R 323097 CDS YP_576335.1 92116606 4032370 complement(1148813..1149976) 1 NC_007964.1 hypothetical protein 1149976 4032370 Nham_1027 Nitrobacter hamburgensis X14 hypothetical protein YP_576335.1 1148813 R 323097 CDS YP_576336.1 92116607 4032371 complement(1150147..1150314) 1 NC_007964.1 hypothetical protein 1150314 4032371 Nham_1028 Nitrobacter hamburgensis X14 hypothetical protein YP_576336.1 1150147 R 323097 CDS YP_576337.1 92116608 4032372 1150399..1151913 1 NC_007964.1 hypothetical protein 1151913 4032372 Nham_1029 Nitrobacter hamburgensis X14 hypothetical protein YP_576337.1 1150399 D 323097 CDS YP_576338.1 92116609 4032373 complement(1151999..1152955) 1 NC_007964.1 peptidase S1 and S6, chymotrypsin/Hap 1152955 4032373 Nham_1030 Nitrobacter hamburgensis X14 peptidase S1 and S6, chymotrypsin/Hap YP_576338.1 1151999 R 323097 CDS YP_576339.1 92116610 4032374 1153137..1154009 1 NC_007964.1 hypothetical protein 1154009 4032374 Nham_1031 Nitrobacter hamburgensis X14 hypothetical protein YP_576339.1 1153137 D 323097 CDS YP_576340.1 92116611 4032375 1154035..1154640 1 NC_007964.1 LuxR family transcriptional regulator 1154640 4032375 Nham_1032 Nitrobacter hamburgensis X14 LuxR family transcriptional regulator YP_576340.1 1154035 D 323097 CDS YP_576341.1 92116612 4032376 1154937..1155179 1 NC_007964.1 hypothetical protein 1155179 4032376 Nham_1033 Nitrobacter hamburgensis X14 hypothetical protein YP_576341.1 1154937 D 323097 CDS YP_576342.1 92116613 4032377 complement(1155228..1155578) 1 NC_007964.1 hypothetical protein 1155578 4032377 Nham_1034 Nitrobacter hamburgensis X14 hypothetical protein YP_576342.1 1155228 R 323097 CDS YP_576343.1 92116614 4032378 complement(1155643..1155885) 1 NC_007964.1 hypothetical protein 1155885 4032378 Nham_1035 Nitrobacter hamburgensis X14 hypothetical protein YP_576343.1 1155643 R 323097 CDS YP_576344.1 92116615 4031642 complement(1156031..1157287) 1 NC_007964.1 heat-shock protein HSP 70 1157287 4031642 Nham_1036 Nitrobacter hamburgensis X14 heat-shock protein HSP 70 YP_576344.1 1156031 R 323097 CDS YP_576345.1 92116616 4031643 1157541..1159877 1 NC_007964.1 RNA binding S1 1159877 4031643 Nham_1037 Nitrobacter hamburgensis X14 RNA binding S1 YP_576345.1 1157541 D 323097 CDS YP_576346.1 92116617 4031644 1160126..1161046 1 NC_007964.1 hypothetical protein 1161046 4031644 Nham_1038 Nitrobacter hamburgensis X14 hypothetical protein YP_576346.1 1160126 D 323097 CDS YP_576347.1 92116618 4031645 1161175..1161681 1 NC_007964.1 (2Fe-2S)-binding protein 1161681 4031645 Nham_1039 Nitrobacter hamburgensis X14 (2Fe-2S)-binding protein YP_576347.1 1161175 D 323097 CDS YP_576348.1 92116619 4031646 1161678..1162694 1 NC_007964.1 molybdopterin dehydrogenase 1162694 4031646 Nham_1040 Nitrobacter hamburgensis X14 molybdopterin dehydrogenase YP_576348.1 1161678 D 323097 CDS YP_576349.1 92116620 4031647 1162858..1165065 1 NC_007964.1 twin-arginine translocation pathway signal 1165065 4031647 Nham_1041 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_576349.1 1162858 D 323097 CDS YP_576350.1 92116621 4031648 1165108..1165239 1 NC_007964.1 hypothetical protein 1165239 4031648 Nham_1042 Nitrobacter hamburgensis X14 hypothetical protein YP_576350.1 1165108 D 323097 CDS YP_576351.1 92116622 4031649 complement(1165372..1166301) 1 NC_007964.1 LysR family transcriptional regulator 1166301 4031649 Nham_1043 Nitrobacter hamburgensis X14 LysR family transcriptional regulator YP_576351.1 1165372 R 323097 CDS YP_576352.1 92116623 4031650 complement(1166478..1168592) 1 NC_007964.1 para-aminobenzoate synthase, component I 1168592 4031650 Nham_1044 Nitrobacter hamburgensis X14 para-aminobenzoate synthase, component I YP_576352.1 1166478 R 323097 CDS YP_576353.1 92116624 4031651 1169121..1170815 1 NC_007964.1 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor 1170815 4031651 Nham_1045 Nitrobacter hamburgensis X14 methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor YP_576353.1 1169121 D 323097 CDS YP_576354.1 92116625 4031652 1170827..1171174 1 NC_007964.1 hypothetical protein 1171174 4031652 Nham_1046 Nitrobacter hamburgensis X14 hypothetical protein YP_576354.1 1170827 D 323097 CDS YP_576355.1 92116626 4031653 1171606..1172070 1 NC_007964.1 hypothetical protein 1172070 4031653 Nham_1047 Nitrobacter hamburgensis X14 hypothetical protein YP_576355.1 1171606 D 323097 CDS YP_576356.1 92116627 4031654 complement(1172119..1172778) 1 NC_007964.1 cobyrinic acid a,c-diamide synthase 1172778 4031654 Nham_1048 Nitrobacter hamburgensis X14 cobyrinic acid a,c-diamide synthase YP_576356.1 1172119 R 323097 CDS YP_576357.1 92116628 4031655 1173277..1174389 1 NC_007964.1 hemolysin-type calcium-binding region 1174389 4031655 Nham_1049 Nitrobacter hamburgensis X14 hemolysin-type calcium-binding region YP_576357.1 1173277 D 323097 CDS YP_576358.1 92116629 4031656 1174800..1175426 1 NC_007964.1 hypothetical protein 1175426 4031656 Nham_1050 Nitrobacter hamburgensis X14 hypothetical protein YP_576358.1 1174800 D 323097 CDS YP_576359.1 92116630 4031657 1175724..1177958 1 NC_007964.1 ABC transporter 1177958 4031657 Nham_1051 Nitrobacter hamburgensis X14 ABC transporter YP_576359.1 1175724 D 323097 CDS YP_576360.1 92116631 4031658 1177948..1179297 1 NC_007964.1 Type I secretion membrane fusion protein, HlyD 1179297 4031658 Nham_1052 Nitrobacter hamburgensis X14 Type I secretion membrane fusion protein, HlyD YP_576360.1 1177948 D 323097 CDS YP_576361.1 92116632 4031659 1179297..1181336 1 NC_007964.1 Sel1-like protein 1181336 4031659 Nham_1053 Nitrobacter hamburgensis X14 Sel1-like protein YP_576361.1 1179297 D 323097 CDS YP_576362.1 92116633 4031660 1181525..1183729 1 NC_007964.1 lipopolysaccharide biosynthesis protein 1183729 4031660 Nham_1054 Nitrobacter hamburgensis X14 lipopolysaccharide biosynthesis protein YP_576362.1 1181525 D 323097 CDS YP_576363.1 92116634 4031622 1183745..1184668 1 NC_007964.1 glycosyl transferase family protein 1184668 4031622 Nham_1055 Nitrobacter hamburgensis X14 glycosyl transferase family protein YP_576363.1 1183745 D 323097 CDS YP_576364.1 92116635 4031623 1184942..1186192 1 NC_007964.1 hypothetical protein 1186192 4031623 Nham_1056 Nitrobacter hamburgensis X14 hypothetical protein YP_576364.1 1184942 D 323097 CDS YP_576365.1 92116636 4031624 complement(1186397..1187698) 1 NC_007964.1 UDP-glucose 6-dehydrogenase 1187698 4031624 Nham_1057 Nitrobacter hamburgensis X14 UDP-glucose 6-dehydrogenase YP_576365.1 1186397 R 323097 CDS YP_576366.1 92116637 4031625 complement(1187771..1188838) 1 NC_007964.1 dTDP-glucose 4,6-dehydratase 1188838 4031625 Nham_1058 Nitrobacter hamburgensis X14 dTDP-glucose 4,6-dehydratase YP_576366.1 1187771 R 323097 CDS YP_576367.1 92116638 4031626 complement(1188864..1189739) 1 NC_007964.1 glucose-1-phosphate thymidylyltransferase 1189739 4031626 Nham_1059 Nitrobacter hamburgensis X14 glucose-1-phosphate thymidylyltransferase YP_576367.1 1188864 R 323097 CDS YP_576368.1 92116639 4031627 1189845..1190399 1 NC_007964.1 dTDP-4-dehydrorhamnose 3,5-epimerase 1190399 4031627 Nham_1060 Nitrobacter hamburgensis X14 dTDP-4-dehydrorhamnose 3,5-epimerase YP_576368.1 1189845 D 323097 CDS YP_576369.1 92116640 4031628 1190399..1191313 1 NC_007964.1 dTDP-4-dehydrorhamnose reductase 1191313 4031628 Nham_1061 Nitrobacter hamburgensis X14 dTDP-4-dehydrorhamnose reductase YP_576369.1 1190399 D 323097 CDS YP_576370.1 92116641 4031629 complement(1191438..1193789) 1 NC_007964.1 glycosyl transferase family protein 1193789 4031629 Nham_1062 Nitrobacter hamburgensis X14 glycosyl transferase family protein YP_576370.1 1191438 R 323097 CDS YP_576371.1 92116642 4031630 complement(1193792..1196248) 1 NC_007964.1 glycosyl transferase family protein 1196248 4031630 Nham_1063 Nitrobacter hamburgensis X14 glycosyl transferase family protein YP_576371.1 1193792 R 323097 CDS YP_576372.1 92116643 4031631 complement(1196408..1197301) 1 NC_007964.1 hypothetical protein 1197301 4031631 Nham_1064 Nitrobacter hamburgensis X14 hypothetical protein YP_576372.1 1196408 R 323097 CDS YP_576373.1 92116644 4031632 complement(1197553..1197783) 1 NC_007964.1 hypothetical protein 1197783 4031632 Nham_1065 Nitrobacter hamburgensis X14 hypothetical protein YP_576373.1 1197553 R 323097 CDS YP_576374.1 92116645 4031633 1198046..1199407 1 NC_007964.1 group 1 glycosyl transferase 1199407 4031633 Nham_1066 Nitrobacter hamburgensis X14 group 1 glycosyl transferase YP_576374.1 1198046 D 323097 CDS YP_576375.1 92116646 4031634 complement(1199513..1200262) 1 NC_007964.1 HAD family hydrolase 1200262 4031634 Nham_1067 Nitrobacter hamburgensis X14 HAD family hydrolase YP_576375.1 1199513 R 323097 CDS YP_576376.1 92116647 4031635 1200633..1200905 1 NC_007964.1 hypothetical protein 1200905 4031635 Nham_1068 Nitrobacter hamburgensis X14 hypothetical protein YP_576376.1 1200633 D 323097 CDS YP_576377.1 92116648 4031636 1201525..1201743 1 NC_007964.1 hypothetical protein 1201743 4031636 Nham_1069 Nitrobacter hamburgensis X14 hypothetical protein YP_576377.1 1201525 D 323097 CDS YP_576378.1 92116649 4031637 1202110..1202535 1 NC_007964.1 PadR-like family transcriptional regulator 1202535 4031637 Nham_1070 Nitrobacter hamburgensis X14 PadR-like family transcriptional regulator YP_576378.1 1202110 D 323097 CDS YP_576379.1 92116650 4031638 complement(1203366..1204184) 1 NC_007964.1 formate/nitrite transporter 1204184 4031638 Nham_1071 Nitrobacter hamburgensis X14 formate/nitrite transporter YP_576379.1 1203366 R 323097 CDS YP_576380.1 92116651 4031639 complement(1204455..1207718) 1 NC_007964.1 hypothetical protein 1207718 4031639 Nham_1072 Nitrobacter hamburgensis X14 hypothetical protein YP_576380.1 1204455 R 323097 CDS YP_576381.1 92116652 4031640 complement(1208518..1208805) 1 NC_007964.1 hypothetical protein 1208805 4031640 Nham_1073 Nitrobacter hamburgensis X14 hypothetical protein YP_576381.1 1208518 R 323097 CDS YP_576382.1 92116653 4031641 complement(1209096..1209701) 1 NC_007964.1 hypothetical protein 1209701 4031641 Nham_1074 Nitrobacter hamburgensis X14 hypothetical protein YP_576382.1 1209096 R 323097 CDS YP_576383.1 92116654 4031603 1210144..1211130 1 NC_007964.1 2-nitropropane dioxygenase 1211130 4031603 Nham_1075 Nitrobacter hamburgensis X14 2-nitropropane dioxygenase YP_576383.1 1210144 D 323097 CDS YP_576384.1 92116655 4031604 complement(1211183..1212577) 1 NC_007964.1 hypothetical protein 1212577 4031604 Nham_1076 Nitrobacter hamburgensis X14 hypothetical protein YP_576384.1 1211183 R 323097 CDS YP_576385.1 92116656 4031605 complement(1212652..1212864) 1 NC_007964.1 SlyX family protein 1212864 4031605 Nham_1077 Nitrobacter hamburgensis X14 SlyX family protein YP_576385.1 1212652 R 323097 CDS YP_576386.1 92116657 4031606 complement(1212857..1213624) 1 NC_007964.1 rhodanese-like protein 1213624 4031606 Nham_1078 Nitrobacter hamburgensis X14 rhodanese-like protein YP_576386.1 1212857 R 323097 CDS YP_576387.1 92116658 4031607 complement(1213883..1214098) 1 NC_007964.1 CsbD-like protein 1214098 4031607 Nham_1079 Nitrobacter hamburgensis X14 CsbD-like protein YP_576387.1 1213883 R 323097 CDS YP_576388.1 92116659 4031608 complement(1214300..1216396) 1 NC_007964.1 methyl-accepting chemotaxis sensory transducer 1216396 4031608 Nham_1080 Nitrobacter hamburgensis X14 methyl-accepting chemotaxis sensory transducer YP_576388.1 1214300 R 323097 CDS YP_576389.1 92116660 4031609 1216916..1218040 1 NC_007964.1 secretion protein HlyD 1218040 4031609 Nham_1081 Nitrobacter hamburgensis X14 secretion protein HlyD YP_576389.1 1216916 D 323097 CDS YP_576390.1 92116661 4031610 1218055..1221189 1 NC_007964.1 acriflavin resistance protein 1221189 4031610 Nham_1082 Nitrobacter hamburgensis X14 acriflavin resistance protein YP_576390.1 1218055 D 323097 CDS YP_576391.1 92116662 4031611 1221208..1221819 1 NC_007964.1 TetR family transcriptional regulator 1221819 4031611 Nham_1083 Nitrobacter hamburgensis X14 TetR family transcriptional regulator YP_576391.1 1221208 D 323097 CDS YP_576392.1 92116663 4031612 complement(1221902..1223416) 1 NC_007964.1 glycosyl transferase family protein 1223416 4031612 Nham_1084 Nitrobacter hamburgensis X14 glycosyl transferase family protein YP_576392.1 1221902 R 323097 CDS YP_576393.1 92116664 4031613 1223881..1226151 1 NC_007964.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 1226151 fadE 4031613 fadE Nitrobacter hamburgensis X14 acyl-CoA dehydrogenase YP_576393.1 1223881 D 323097 CDS YP_576394.1 92116665 4031614 1226151..1227434 1 NC_007964.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 1227434 4031614 Nham_1086 Nitrobacter hamburgensis X14 acetyl-CoA acetyltransferase YP_576394.1 1226151 D 323097 CDS YP_576395.1 92116666 4031615 1227442..1229532 1 NC_007964.1 3-hydroxyacyl-CoA dehydrogenase 1229532 4031615 Nham_1087 Nitrobacter hamburgensis X14 3-hydroxyacyl-CoA dehydrogenase YP_576395.1 1227442 D 323097 CDS YP_576396.1 92116667 4031616 1229578..1230042 1 NC_007964.1 thioesterase superfamily protein 1230042 4031616 Nham_1088 Nitrobacter hamburgensis X14 thioesterase superfamily protein YP_576396.1 1229578 D 323097 CDS YP_576397.1 92116668 4031617 1230206..1230490 1 NC_007964.1 hypothetical protein 1230490 4031617 Nham_1089 Nitrobacter hamburgensis X14 hypothetical protein YP_576397.1 1230206 D 323097 CDS YP_576398.1 92116669 4031618 1230688..1232232 1 NC_007964.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 1232232 glpD 4031618 glpD Nitrobacter hamburgensis X14 glycerol-3-phosphate dehydrogenase YP_576398.1 1230688 D 323097 CDS YP_576399.1 92116670 4031619 complement(1232341..1232931) 1 NC_007964.1 hypothetical protein 1232931 4031619 Nham_1091 Nitrobacter hamburgensis X14 hypothetical protein YP_576399.1 1232341 R 323097 CDS YP_576400.1 92116671 4031620 complement(1233039..1234343) 1 NC_007964.1 lytic murein transglycosylase 1234343 4031620 Nham_1092 Nitrobacter hamburgensis X14 lytic murein transglycosylase YP_576400.1 1233039 R 323097 CDS YP_576401.1 92116672 4031621 1234944..1236221 1 NC_007964.1 twin-arginine translocation pathway signal 1236221 4031621 Nham_1093 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_576401.1 1234944 D 323097 CDS YP_576402.1 92116673 4031583 1236208..1236774 1 NC_007964.1 cytochrome c, class I 1236774 4031583 Nham_1094 Nitrobacter hamburgensis X14 cytochrome c, class I YP_576402.1 1236208 D 323097 CDS YP_576403.1 92116674 4031584 1237107..1238216 1 NC_007964.1 transposase, IS4 1238216 4031584 Nham_1095 Nitrobacter hamburgensis X14 transposase, IS4 YP_576403.1 1237107 D 323097 CDS YP_576404.1 92116675 4031585 complement(1238393..1239844) 1 NC_007964.1 XRE family transcriptional regulator 1239844 4031585 Nham_1096 Nitrobacter hamburgensis X14 XRE family transcriptional regulator YP_576404.1 1238393 R 323097 CDS YP_576405.1 92116676 4031586 1240012..1241319 1 NC_007964.1 isocitrate lyase 1241319 4031586 Nham_1097 Nitrobacter hamburgensis X14 isocitrate lyase YP_576405.1 1240012 D 323097 CDS YP_576406.1 92116677 4031587 1241332..1241538 1 NC_007964.1 hypothetical protein 1241538 4031587 Nham_1098 Nitrobacter hamburgensis X14 hypothetical protein YP_576406.1 1241332 D 323097 CDS YP_576407.1 92116678 4031588 1241765..1242322 1 NC_007964.1 hypothetical protein 1242322 4031588 Nham_1099 Nitrobacter hamburgensis X14 hypothetical protein YP_576407.1 1241765 D 323097 CDS YP_576408.1 92116679 4031589 complement(1242353..1243504) 1 NC_007964.1 glucose sorbosone dehydrogenase 1243504 4031589 Nham_1100 Nitrobacter hamburgensis X14 glucose sorbosone dehydrogenase YP_576408.1 1242353 R 323097 CDS YP_576409.1 92116680 4031590 complement(1243980..1244750) 1 NC_007964.1 glutathione S-transferase 1244750 4031590 Nham_1101 Nitrobacter hamburgensis X14 glutathione S-transferase YP_576409.1 1243980 R 323097 CDS YP_576410.1 92116681 4031592 1246273..1247475 1 NC_007964.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1247475 4031592 Nham_1103 Nitrobacter hamburgensis X14 aspartate aminotransferase YP_576410.1 1246273 D 323097 CDS YP_576411.1 92116682 4031593 1247830..1248390 1 NC_007964.1 hypothetical protein 1248390 4031593 Nham_1104 Nitrobacter hamburgensis X14 hypothetical protein YP_576411.1 1247830 D 323097 CDS YP_576412.1 92116683 4031594 1248571..1249053 1 NC_007964.1 hypothetical protein 1249053 4031594 Nham_1105 Nitrobacter hamburgensis X14 hypothetical protein YP_576412.1 1248571 D 323097 CDS YP_576413.1 92116684 4031595 1249199..1251298 1 NC_007964.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1251298 4031595 Nham_1106 Nitrobacter hamburgensis X14 elongation factor G YP_576413.1 1249199 D 323097 CDS YP_576414.1 92116685 4031596 1251420..1251695 1 NC_007964.1 XRE family transcriptional regulator 1251695 4031596 Nham_1107 Nitrobacter hamburgensis X14 XRE family transcriptional regulator YP_576414.1 1251420 D 323097 CDS YP_576415.1 92116686 4031597 1251751..1253502 1 NC_007964.1 sulfate transporter 1253502 4031597 Nham_1108 Nitrobacter hamburgensis X14 sulfate transporter YP_576415.1 1251751 D 323097 CDS YP_576416.1 92116687 4031598 1253631..1254488 1 NC_007964.1 shikimate 5-dehydrogenase 1254488 4031598 Nham_1109 Nitrobacter hamburgensis X14 shikimate 5-dehydrogenase YP_576416.1 1253631 D 323097 CDS YP_576417.1 92116688 4031599 1254564..1254920 1 NC_007964.1 hypothetical protein 1254920 4031599 Nham_1110 Nitrobacter hamburgensis X14 hypothetical protein YP_576417.1 1254564 D 323097 CDS YP_576418.1 92116689 4031600 1254917..1256797 1 NC_007964.1 ferrous iron transport protein B 1256797 4031600 Nham_1111 Nitrobacter hamburgensis X14 ferrous iron transport protein B YP_576418.1 1254917 D 323097 CDS YP_576419.1 92116690 4031601 complement(1256966..1258111) 1 NC_007964.1 L-lactate dehydrogenase (cytochrome) 1258111 4031601 Nham_1112 Nitrobacter hamburgensis X14 L-lactate dehydrogenase (cytochrome) YP_576419.1 1256966 R 323097 CDS YP_576420.1 92116691 4031602 1258421..1258585 1 NC_007964.1 hypothetical protein 1258585 4031602 Nham_1113 Nitrobacter hamburgensis X14 hypothetical protein YP_576420.1 1258421 D 323097 CDS YP_576421.1 92116692 4031564 1258947..1260293 1 NC_007964.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 1260293 glmM 4031564 glmM Nitrobacter hamburgensis X14 phosphoglucosamine mutase YP_576421.1 1258947 D 323097 CDS YP_576422.1 92116693 4031565 1260433..1261680 1 NC_007964.1 major facilitator transporter 1261680 4031565 Nham_1115 Nitrobacter hamburgensis X14 major facilitator transporter YP_576422.1 1260433 D 323097 CDS YP_576423.1 92116694 4031566 1261982..1262854 1 NC_007964.1 hypothetical protein 1262854 4031566 Nham_1116 Nitrobacter hamburgensis X14 hypothetical protein YP_576423.1 1261982 D 323097 CDS YP_576424.1 92116695 4031567 1263065..1263889 1 NC_007964.1 hypothetical protein 1263889 4031567 Nham_1117 Nitrobacter hamburgensis X14 hypothetical protein YP_576424.1 1263065 D 323097 CDS YP_576425.1 92116696 4031568 1264500..1265672 1 NC_007964.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase 1265672 4031568 Nham_1118 Nitrobacter hamburgensis X14 phosphoserine aminotransferase YP_576425.1 1264500 D 323097 CDS YP_576426.1 92116697 4031569 1265834..1267423 1 NC_007964.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 1267423 4031569 Nham_1119 Nitrobacter hamburgensis X14 D-3-phosphoglycerate dehydrogenase YP_576426.1 1265834 D 323097 CDS YP_576427.1 92116698 4031570 complement(1267429..1267902) 1 NC_007964.1 hypothetical protein 1267902 4031570 Nham_1120 Nitrobacter hamburgensis X14 hypothetical protein YP_576427.1 1267429 R 323097 CDS YP_576428.1 92116699 4031571 1268032..1268229 1 NC_007964.1 hypothetical protein 1268229 4031571 Nham_1121 Nitrobacter hamburgensis X14 hypothetical protein YP_576428.1 1268032 D 323097 CDS YP_576429.1 92116700 4031572 complement(1268259..1269827) 1 NC_007964.1 peptidase S10, serine carboxypeptidase 1269827 4031572 Nham_1122 Nitrobacter hamburgensis X14 peptidase S10, serine carboxypeptidase YP_576429.1 1268259 R 323097 CDS YP_576430.1 92116701 4031573 1270163..1271536 1 NC_007964.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 1271536 4031573 Nham_1123 Nitrobacter hamburgensis X14 adenylosuccinate synthetase YP_576430.1 1270163 D 323097 CDS YP_576431.1 92116702 4031574 1271597..1273153 1 NC_007964.1 hypothetical protein 1273153 4031574 Nham_1124 Nitrobacter hamburgensis X14 hypothetical protein YP_576431.1 1271597 D 323097 CDS YP_576432.1 92116703 4031575 complement(1273197..1273415) 1 NC_007964.1 hypothetical protein 1273415 4031575 Nham_1125 Nitrobacter hamburgensis X14 hypothetical protein YP_576432.1 1273197 R 323097 CDS YP_576433.1 92116704 4031576 1273728..1274279 1 NC_007964.1 hypothetical protein 1274279 4031576 Nham_1126 Nitrobacter hamburgensis X14 hypothetical protein YP_576433.1 1273728 D 323097 CDS YP_576434.1 92116705 4031577 complement(1274289..1274561) 1 NC_007964.1 hypothetical protein 1274561 4031577 Nham_1127 Nitrobacter hamburgensis X14 hypothetical protein YP_576434.1 1274289 R 323097 CDS YP_576435.1 92116706 4031578 complement(1274881..1275294) 1 NC_007964.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 1275294 4031578 Nham_1128 Nitrobacter hamburgensis X14 methionine sulfoxide reductase B YP_576435.1 1274881 R 323097 CDS YP_576436.1 92116707 4031579 complement(1275316..1276038) 1 NC_007964.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 1276038 4031579 Nham_1129 Nitrobacter hamburgensis X14 methionine sulfoxide reductase A YP_576436.1 1275316 R 323097 CDS YP_576437.1 92116708 4031580 complement(1276217..1276486) 1 NC_007964.1 hypothetical protein 1276486 4031580 Nham_1130 Nitrobacter hamburgensis X14 hypothetical protein YP_576437.1 1276217 R 323097 CDS YP_576438.1 92116709 4031581 complement(1276491..1277366) 1 NC_007964.1 UTP-glucose-1-phosphate uridylyltransferase 1277366 4031581 Nham_1131 Nitrobacter hamburgensis X14 UTP-glucose-1-phosphate uridylyltransferase YP_576438.1 1276491 R 323097 CDS YP_576439.1 92116710 4031582 1277591..1279036 1 NC_007964.1 lytic murein transglycosylase 1279036 4031582 Nham_1132 Nitrobacter hamburgensis X14 lytic murein transglycosylase YP_576439.1 1277591 D 323097 CDS YP_576440.1 92116711 4032494 1279209..1280828 1 NC_007964.1 hypothetical protein 1280828 4032494 Nham_1133 Nitrobacter hamburgensis X14 hypothetical protein YP_576440.1 1279209 D 323097 CDS YP_576441.1 92116712 4032495 complement(1280881..1281234) 1 NC_007964.1 hypothetical protein 1281234 4032495 Nham_1134 Nitrobacter hamburgensis X14 hypothetical protein YP_576441.1 1280881 R 323097 CDS YP_576442.1 92116713 4032496 complement(1281644..1282753) 1 NC_007964.1 transposase, IS4 1282753 4032496 Nham_1135 Nitrobacter hamburgensis X14 transposase, IS4 YP_576442.1 1281644 R 323097 CDS YP_576443.1 92116714 4032498 complement(1283549..1285003) 1 NC_007964.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 1285003 gltD 4032498 gltD Nitrobacter hamburgensis X14 glutamate synthase subunit beta YP_576443.1 1283549 R 323097 CDS YP_576444.1 92116715 4032499 complement(1285084..1289847) 1 NC_007964.1 glutamate synthase 1289847 4032499 Nham_1138 Nitrobacter hamburgensis X14 glutamate synthase YP_576444.1 1285084 R 323097 CDS YP_576445.1 92116716 4032500 complement(1290467..1290928) 1 NC_007964.1 heat shock protein Hsp20 1290928 4032500 Nham_1139 Nitrobacter hamburgensis X14 heat shock protein Hsp20 YP_576445.1 1290467 R 323097 CDS YP_576446.1 92116717 4032501 1291152..1292096 1 NC_007964.1 alpha/beta hydrolase 1292096 4032501 Nham_1140 Nitrobacter hamburgensis X14 alpha/beta hydrolase YP_576446.1 1291152 D 323097 CDS YP_576447.1 92116718 4032502 complement(1292217..1293044) 1 NC_007964.1 histidinol-phosphate phosphatase 1293044 4032502 Nham_1141 Nitrobacter hamburgensis X14 histidinol-phosphate phosphatase YP_576447.1 1292217 R 323097 CDS YP_576448.1 92116719 4032503 complement(1293536..1294423) 1 NC_007964.1 N-formylglutamate amidohydrolase 1294423 4032503 Nham_1142 Nitrobacter hamburgensis X14 N-formylglutamate amidohydrolase YP_576448.1 1293536 R 323097 CDS YP_576449.1 92116720 4032504 1294608..1294967 1 NC_007964.1 response regulator receiver domain-containing protein 1294967 4032504 Nham_1143 Nitrobacter hamburgensis X14 response regulator receiver domain-containing protein YP_576449.1 1294608 D 323097 CDS YP_576450.1 92116721 4032506 complement(1295229..1295576) 1 NC_007964.1 hypothetical protein 1295576 4032506 Nham_1144 Nitrobacter hamburgensis X14 hypothetical protein YP_576450.1 1295229 R 323097 CDS YP_576451.1 92116722 4032507 complement(1295785..1297434) 1 NC_007964.1 recombinase 1297434 4032507 Nham_1145 Nitrobacter hamburgensis X14 recombinase YP_576451.1 1295785 R 323097 CDS YP_576452.1 92116723 4032508 complement(1297431..1297931) 1 NC_007964.1 bacteriophage-like protein 1297931 4032508 Nham_1146 Nitrobacter hamburgensis X14 bacteriophage-like protein YP_576452.1 1297431 R 323097 CDS YP_576453.1 92116724 4032509 complement(1297935..1298345) 1 NC_007964.1 hypothetical protein 1298345 4032509 Nham_1147 Nitrobacter hamburgensis X14 hypothetical protein YP_576453.1 1297935 R 323097 CDS YP_576454.1 92116725 4032511 complement(1302150..1302947) 1 NC_007964.1 hypothetical protein 1302947 4032511 Nham_1149 Nitrobacter hamburgensis X14 hypothetical protein YP_576454.1 1302150 R 323097 CDS YP_576455.1 92116726 4032512 complement(1303342..1305918) 1 NC_007964.1 DEAD/DEAH box helicase 1305918 4032512 Nham_1150 Nitrobacter hamburgensis X14 DEAD/DEAH box helicase YP_576455.1 1303342 R 323097 CDS YP_576456.1 92116727 4032551 complement(1305920..1306894) 1 NC_007964.1 hypothetical protein 1306894 4032551 Nham_1151 Nitrobacter hamburgensis X14 hypothetical protein YP_576456.1 1305920 R 323097 CDS YP_576457.1 92116728 4032552 complement(1307648..1307983) 1 NC_007964.1 PRC-barrel protein 1307983 4032552 Nham_1152 Nitrobacter hamburgensis X14 PRC-barrel protein YP_576457.1 1307648 R 323097 CDS YP_576458.1 92116729 4032553 complement(1308251..1309078) 1 NC_007964.1 signal transduction histidine kinase 1309078 4032553 Nham_1153 Nitrobacter hamburgensis X14 signal transduction histidine kinase YP_576458.1 1308251 R 323097 CDS YP_576459.1 92116730 4032554 1309214..1309543 1 NC_007964.1 hypothetical protein 1309543 4032554 Nham_1154 Nitrobacter hamburgensis X14 hypothetical protein YP_576459.1 1309214 D 323097 CDS YP_576460.1 92116731 4032555 1309570..1309947 1 NC_007964.1 ISSpo6, transposase orf A 1309947 4032555 Nham_1155 Nitrobacter hamburgensis X14 ISSpo6, transposase orf A YP_576460.1 1309570 D 323097 CDS YP_576461.1 92116732 4032556 1309994..1310524 1 NC_007964.1 ISSpo6, transposase OrfB 1310524 4032556 Nham_1156 Nitrobacter hamburgensis X14 ISSpo6, transposase OrfB YP_576461.1 1309994 D 323097 CDS YP_576462.1 92116733 4032557 complement(1310552..1311091) 1 NC_007964.1 hypothetical protein 1311091 4032557 Nham_1157 Nitrobacter hamburgensis X14 hypothetical protein YP_576462.1 1310552 R 323097 CDS YP_576463.1 92116734 4032558 complement(1312692..1312952) 1 NC_007964.1 hypothetical protein 1312952 4032558 Nham_1158 Nitrobacter hamburgensis X14 hypothetical protein YP_576463.1 1312692 R 323097 CDS YP_576464.1 92116735 4032560 1314382..1316163 1 NC_007964.1 hypothetical protein 1316163 4032560 Nham_1160 Nitrobacter hamburgensis X14 hypothetical protein YP_576464.1 1314382 D 323097 CDS YP_576465.1 92116736 4032561 1316248..1319736 1 NC_007964.1 hypothetical protein 1319736 4032561 Nham_1161 Nitrobacter hamburgensis X14 hypothetical protein YP_576465.1 1316248 D 323097 CDS YP_576466.1 92116737 4032563 complement(1321120..1322064) 1 NC_007964.1 hypothetical protein 1322064 4032563 Nham_1163 Nitrobacter hamburgensis X14 hypothetical protein YP_576466.1 1321120 R 323097 CDS YP_576467.1 92116738 4032564 complement(1322101..1322715) 1 NC_007964.1 hypothetical protein 1322715 4032564 Nham_1164 Nitrobacter hamburgensis X14 hypothetical protein YP_576467.1 1322101 R 323097 CDS YP_576468.1 92116739 4032565 complement(1323570..1324643) 1 NC_007964.1 signal transduction histidine kinase 1324643 4032565 Nham_1165 Nitrobacter hamburgensis X14 signal transduction histidine kinase YP_576468.1 1323570 R 323097 CDS YP_576469.1 92116740 4032567 complement(1325236..1326090) 1 NC_007964.1 integrase catalytic subunit 1326090 4032567 Nham_1167 Nitrobacter hamburgensis X14 integrase catalytic subunit YP_576469.1 1325236 R 323097 CDS YP_576470.1 92116741 4032568 complement(1326173..1326403) 1 NC_007964.1 transposase and inactivated derivative 1326403 4032568 Nham_1168 Nitrobacter hamburgensis X14 transposase and inactivated derivative YP_576470.1 1326173 R 323097 CDS YP_576471.1 92116742 4032569 1326695..1326895 1 NC_007964.1 cold-shock DNA-binding domain-containing protein 1326895 4032569 Nham_1169 Nitrobacter hamburgensis X14 cold-shock DNA-binding domain-containing protein YP_576471.1 1326695 D 323097 CDS YP_576472.1 92116743 4032628 1327076..1328206 1 NC_007964.1 fatty acid desaturase 1328206 4032628 Nham_1170 Nitrobacter hamburgensis X14 fatty acid desaturase YP_576472.1 1327076 D 323097 CDS YP_576473.1 92116744 4032630 1329019..1330209 1 NC_007964.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 1330209 4032630 Nham_1172 Nitrobacter hamburgensis X14 NADH dehydrogenase subunit D YP_576473.1 1329019 D 323097 CDS YP_576474.1 92116745 4032633 complement(1331794..1332342) 1 NC_007964.1 hypothetical protein 1332342 4032633 Nham_1175 Nitrobacter hamburgensis X14 hypothetical protein YP_576474.1 1331794 R 323097 CDS YP_576475.1 92116746 4032634 complement(1332843..1334480) 1 NC_007964.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is co-regulated with symbiotic nitrogen fixation genes; chaperonin GroEL 1334480 groEL 4032634 groEL Nitrobacter hamburgensis X14 chaperonin GroEL YP_576475.1 1332843 R 323097 CDS YP_576476.1 92116747 4032635 complement(1334617..1334934) 1 NC_007964.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 1334934 groES 4032635 groES Nitrobacter hamburgensis X14 co-chaperonin GroES YP_576476.1 1334617 R 323097 CDS YP_576477.1 92116748 4032637 1335506..1335859 1 NC_007964.1 hypothetical protein 1335859 4032637 Nham_1179 Nitrobacter hamburgensis X14 hypothetical protein YP_576477.1 1335506 D 323097 CDS YP_576478.1 92116749 4032639 complement(1336813..1339053) 1 NC_007964.1 twin-arginine translocation pathway signal 1339053 4032639 Nham_1181 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_576478.1 1336813 R 323097 CDS YP_576479.1 92116750 4032640 complement(1339066..1339518) 1 NC_007964.1 (2Fe-2S)-binding protein 1339518 4032640 Nham_1182 Nitrobacter hamburgensis X14 (2Fe-2S)-binding protein YP_576479.1 1339066 R 323097 CDS YP_576480.1 92116751 4032641 complement(1339515..1340777) 1 NC_007964.1 cytochrome c, class I 1340777 4032641 Nham_1183 Nitrobacter hamburgensis X14 cytochrome c, class I YP_576480.1 1339515 R 323097 CDS YP_576481.1 92116752 4032642 complement(1340955..1342436) 1 NC_007964.1 phage protein 1342436 4032642 Nham_1184 Nitrobacter hamburgensis X14 phage protein YP_576481.1 1340955 R 323097 CDS YP_576482.1 92116753 4032644 1344616..1344903 1 NC_007964.1 hypothetical protein 1344903 4032644 Nham_1186 Nitrobacter hamburgensis X14 hypothetical protein YP_576482.1 1344616 D 323097 CDS YP_576483.1 92116754 4032646 complement(1345823..1346353) 1 NC_007964.1 ISSpo6, transposase OrfB 1346353 4032646 Nham_1188 Nitrobacter hamburgensis X14 ISSpo6, transposase OrfB YP_576483.1 1345823 R 323097 CDS YP_576484.1 92116755 4032647 complement(1346400..1346777) 1 NC_007964.1 ISSpo6, transposase orf A 1346777 4032647 Nham_1189 Nitrobacter hamburgensis X14 ISSpo6, transposase orf A YP_576484.1 1346400 R 323097 CDS YP_576485.1 92116756 4032284 1349018..1350019 1 NC_007964.1 polysaccharide biosynthesis protein CapD 1350019 4032284 Nham_1193 Nitrobacter hamburgensis X14 polysaccharide biosynthesis protein CapD YP_576485.1 1349018 D 323097 CDS YP_576486.1 92116757 4032285 1350016..1351173 1 NC_007964.1 DegT/DnrJ/EryC1/StrS aminotransferase 1351173 4032285 Nham_1194 Nitrobacter hamburgensis X14 DegT/DnrJ/EryC1/StrS aminotransferase YP_576486.1 1350016 D 323097 CDS YP_576487.1 92116758 4032286 1351245..1352834 1 NC_007964.1 hypothetical protein 1352834 4032286 Nham_1195 Nitrobacter hamburgensis X14 hypothetical protein YP_576487.1 1351245 D 323097 CDS YP_576488.1 92116759 4032287 complement(1352898..1353950) 1 NC_007964.1 N-acylneuraminate-9-phosphate synthase 1353950 4032287 Nham_1196 Nitrobacter hamburgensis X14 N-acylneuraminate-9-phosphate synthase YP_576488.1 1352898 R 323097 CDS YP_576489.1 92116760 4032288 complement(1354091..1354876) 1 NC_007964.1 NUDIX hydrolase 1354876 4032288 Nham_1197 Nitrobacter hamburgensis X14 NUDIX hydrolase YP_576489.1 1354091 R 323097 CDS YP_576490.1 92116761 4032289 complement(1354870..1355532) 1 NC_007964.1 haloacid dehalogenase-like hydrolase 1355532 4032289 Nham_1198 Nitrobacter hamburgensis X14 haloacid dehalogenase-like hydrolase YP_576490.1 1354870 R 323097 CDS YP_576491.1 92116762 4032290 complement(1355532..1356392) 1 NC_007964.1 methyltransferase type 11 1356392 4032290 Nham_1199 Nitrobacter hamburgensis X14 methyltransferase type 11 YP_576491.1 1355532 R 323097 CDS YP_576492.1 92116763 4032291 1356843..1357463 1 NC_007964.1 hypothetical protein 1357463 4032291 Nham_1200 Nitrobacter hamburgensis X14 hypothetical protein YP_576492.1 1356843 D 323097 CDS YP_576493.1 92116764 4032292 1357926..1358651 1 NC_007964.1 acylneuraminate cytidylyltransferase 1358651 4032292 Nham_1201 Nitrobacter hamburgensis X14 acylneuraminate cytidylyltransferase YP_576493.1 1357926 D 323097 CDS YP_576494.1 92116765 4032294 complement(1359354..1360217) 1 NC_007964.1 IstB-like ATP-binding protein 1360217 4032294 Nham_1203 Nitrobacter hamburgensis X14 IstB-like ATP-binding protein YP_576494.1 1359354 R 323097 CDS YP_576495.1 92116766 4032297 1361321..1362661 1 NC_007964.1 twin-arginine translocation pathway signal 1362661 4032297 Nham_1206 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_576495.1 1361321 D 323097 CDS YP_576496.1 92116767 4032298 1362779..1363807 1 NC_007964.1 ABC transporter 1363807 4032298 Nham_1207 Nitrobacter hamburgensis X14 ABC transporter YP_576496.1 1362779 D 323097 CDS YP_576497.1 92116768 4032299 1363804..1364748 1 NC_007964.1 binding-protein-dependent transport system inner membrane protein 1364748 4032299 Nham_1208 Nitrobacter hamburgensis X14 binding-protein-dependent transport system inner membrane protein YP_576497.1 1363804 D 323097 CDS YP_576498.1 92116769 4032261 1364750..1365604 1 NC_007964.1 binding-protein-dependent transport system inner membrane protein 1365604 4032261 Nham_1209 Nitrobacter hamburgensis X14 binding-protein-dependent transport system inner membrane protein YP_576498.1 1364750 D 323097 CDS YP_576499.1 92116770 4032263 complement(1368189..1368446) 1 NC_007964.1 hypothetical protein 1368446 4032263 Nham_1211 Nitrobacter hamburgensis X14 hypothetical protein YP_576499.1 1368189 R 323097 CDS YP_576500.1 92116771 4032264 complement(1368506..1368670) 1 NC_007964.1 hypothetical protein 1368670 4032264 Nham_1212 Nitrobacter hamburgensis X14 hypothetical protein YP_576500.1 1368506 R 323097 CDS YP_576501.1 92116772 4032265 1368994..1370805 1 NC_007964.1 signal transduction histidine kinase 1370805 4032265 Nham_1213 Nitrobacter hamburgensis X14 signal transduction histidine kinase YP_576501.1 1368994 D 323097 CDS YP_576502.1 92116773 4032266 1371524..1371649 1 NC_007964.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 1371649 rpmJ 4032266 rpmJ Nitrobacter hamburgensis X14 50S ribosomal protein L36 YP_576502.1 1371524 D 323097 CDS YP_576503.1 92116774 4032267 1371883..1372557 1 NC_007964.1 tetratricopeptide TPR_2 1372557 4032267 Nham_1215 Nitrobacter hamburgensis X14 tetratricopeptide TPR_2 YP_576503.1 1371883 D 323097 CDS YP_576504.1 92116775 4032268 complement(1372782..1372943) 1 NC_007964.1 hypothetical protein 1372943 4032268 Nham_1216 Nitrobacter hamburgensis X14 hypothetical protein YP_576504.1 1372782 R 323097 CDS YP_576505.1 92116776 4032269 1373148..1374176 1 NC_007964.1 alpha/beta hydrolase fold 1374176 4032269 Nham_1217 Nitrobacter hamburgensis X14 alpha/beta hydrolase fold YP_576505.1 1373148 D 323097 CDS YP_576506.1 92116777 4032270 complement(1374256..1375692) 1 NC_007964.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 1375692 4032270 Nham_1218 Nitrobacter hamburgensis X14 pyruvate kinase YP_576506.1 1374256 R 323097 CDS YP_576507.1 92116778 4032271 complement(1375689..1376273) 1 NC_007964.1 hypothetical protein 1376273 4032271 Nham_1219 Nitrobacter hamburgensis X14 hypothetical protein YP_576507.1 1375689 R 323097 CDS YP_576508.1 92116779 4032272 1376461..1376763 1 NC_007964.1 hypothetical protein 1376763 4032272 Nham_1220 Nitrobacter hamburgensis X14 hypothetical protein YP_576508.1 1376461 D 323097 CDS YP_576509.1 92116780 4032273 1376932..1377201 1 NC_007964.1 hypothetical protein 1377201 4032273 Nham_1221 Nitrobacter hamburgensis X14 hypothetical protein YP_576509.1 1376932 D 323097 CDS YP_576510.1 92116781 4032274 complement(1377421..1379001) 1 NC_007964.1 hypothetical protein 1379001 4032274 Nham_1222 Nitrobacter hamburgensis X14 hypothetical protein YP_576510.1 1377421 R 323097 CDS YP_576511.1 92116782 4032275 complement(1379273..1381600) 1 NC_007964.1 peptidoglycan binding domain-containing protein 1381600 4032275 Nham_1223 Nitrobacter hamburgensis X14 peptidoglycan binding domain-containing protein YP_576511.1 1379273 R 323097 CDS YP_576512.1 92116783 4032276 complement(1381920..1383398) 1 NC_007964.1 two component, sigma54 specific, Fis family transcriptional regulator 1383398 4032276 Nham_1224 Nitrobacter hamburgensis X14 two component, sigma54 specific, Fis family transcriptional regulator YP_576512.1 1381920 R 323097 CDS YP_576513.1 92116784 4032277 1383530..1385410 1 NC_007964.1 peptidase M3B, oligoendopeptidase-related clade 3 1385410 4032277 Nham_1225 Nitrobacter hamburgensis X14 peptidase M3B, oligoendopeptidase-related clade 3 YP_576513.1 1383530 D 323097 CDS YP_576514.1 92116785 4032278 1386107..1386259 1 NC_007964.1 hypothetical protein 1386259 4032278 Nham_1226 Nitrobacter hamburgensis X14 hypothetical protein YP_576514.1 1386107 D 323097 CDS YP_576515.1 92116786 4032279 1386343..1387473 1 NC_007964.1 NAD(P)(+) transhydrogenase 1387473 4032279 Nham_1227 Nitrobacter hamburgensis X14 NAD(P)(+) transhydrogenase YP_576515.1 1386343 D 323097 CDS YP_576516.1 92116787 4032280 1387618..1387935 1 NC_007964.1 NAD(P) transhydrogenase subunit alpha 1387935 4032280 Nham_1228 Nitrobacter hamburgensis X14 NAD(P) transhydrogenase subunit alpha YP_576516.1 1387618 D 323097 CDS YP_576517.1 92116788 4032223 1388178..1389578 1 NC_007964.1 NAD(P) transhydrogenase, beta subunit 1389578 4032223 Nham_1229 Nitrobacter hamburgensis X14 NAD(P) transhydrogenase, beta subunit YP_576517.1 1388178 D 323097 CDS YP_576518.1 92116789 4032224 1389609..1390082 1 NC_007964.1 hypothetical protein 1390082 4032224 Nham_1230 Nitrobacter hamburgensis X14 hypothetical protein YP_576518.1 1389609 D 323097 CDS YP_576519.1 92116790 4032225 1390368..1390463 1 NC_007964.1 hypothetical protein 1390463 4032225 Nham_1231 Nitrobacter hamburgensis X14 hypothetical protein YP_576519.1 1390368 D 323097 CDS YP_576520.1 92116791 4032226 1390667..1391521 1 NC_007964.1 hypothetical protein 1391521 4032226 Nham_1232 Nitrobacter hamburgensis X14 hypothetical protein YP_576520.1 1390667 D 323097 CDS YP_576521.1 92116792 4032227 complement(1391734..1392021) 1 NC_007964.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1392021 rpsU 4032227 rpsU Nitrobacter hamburgensis X14 30S ribosomal protein S21 YP_576521.1 1391734 R 323097 CDS YP_576522.1 92116793 4032228 1392277..1392990 1 NC_007964.1 porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; aquaporin Z 1392990 4032228 Nham_1234 Nitrobacter hamburgensis X14 aquaporin Z YP_576522.1 1392277 D 323097 CDS YP_576523.1 92116794 4032229 complement(1393177..1394292) 1 NC_007964.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 1394292 4032229 Nham_1235 Nitrobacter hamburgensis X14 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_576523.1 1393177 R 323097 CDS YP_576524.1 92116795 4032230 complement(1394289..1394774) 1 NC_007964.1 phosphoribosylaminoimidazole carboxylase catalytic subunit 1394774 4032230 Nham_1236 Nitrobacter hamburgensis X14 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_576524.1 1394289 R 323097 CDS YP_576525.1 92116796 4032231 1394894..1395577 1 NC_007964.1 diguanylate cyclase 1395577 4032231 Nham_1237 Nitrobacter hamburgensis X14 diguanylate cyclase YP_576525.1 1394894 D 323097 CDS YP_576526.1 92116797 4032232 complement(1395687..1395962) 1 NC_007964.1 hypothetical protein 1395962 4032232 Nham_1238 Nitrobacter hamburgensis X14 hypothetical protein YP_576526.1 1395687 R 323097 CDS YP_576527.1 92116798 4032233 1396147..1396332 1 NC_007964.1 hypothetical protein 1396332 4032233 Nham_1239 Nitrobacter hamburgensis X14 hypothetical protein YP_576527.1 1396147 D 323097 CDS YP_576528.1 92116799 4032234 complement(1396428..1397531) 1 NC_007964.1 FAD dependent oxidoreductase 1397531 4032234 Nham_1240 Nitrobacter hamburgensis X14 FAD dependent oxidoreductase YP_576528.1 1396428 R 323097 CDS YP_576529.1 92116800 4032235 1397792..1400488 1 NC_007964.1 diguanylate cyclase/phosphodiesterase 1400488 4032235 Nham_1241 Nitrobacter hamburgensis X14 diguanylate cyclase/phosphodiesterase YP_576529.1 1397792 D 323097 CDS YP_576530.1 92116801 4032237 1401933..1402847 1 NC_007964.1 binding-protein-dependent transport systems inner membrane component 1402847 4032237 Nham_1243 Nitrobacter hamburgensis X14 binding-protein-dependent transport systems inner membrane component YP_576530.1 1401933 D 323097 CDS YP_576531.1 92116802 4032238 1402847..1403665 1 NC_007964.1 binding-protein-dependent transport system inner membrane protein 1403665 4032238 Nham_1244 Nitrobacter hamburgensis X14 binding-protein-dependent transport system inner membrane protein YP_576531.1 1402847 D 323097 CDS YP_576532.1 92116803 4032239 complement(1403703..1405634) 1 NC_007964.1 AsmA 1405634 4032239 Nham_1245 Nitrobacter hamburgensis X14 AsmA YP_576532.1 1403703 R 323097 CDS YP_576533.1 92116804 4032240 1405862..1406569 1 NC_007964.1 3-oxoacid CoA-transferase subunit A 1406569 4032240 Nham_1246 Nitrobacter hamburgensis X14 3-oxoacid CoA-transferase subunit A YP_576533.1 1405862 D 323097 CDS YP_576534.1 92116805 4032241 1406666..1407316 1 NC_007964.1 3-oxoacid CoA-transferase subunit B 1407316 4032241 Nham_1247 Nitrobacter hamburgensis X14 3-oxoacid CoA-transferase subunit B YP_576534.1 1406666 D 323097 CDS YP_576535.1 92116806 4032184 complement(1407457..1408053) 1 NC_007964.1 hypothetical protein 1408053 4032184 Nham_1248 Nitrobacter hamburgensis X14 hypothetical protein YP_576535.1 1407457 R 323097 CDS YP_576536.1 92116807 4032185 complement(1408125..1411220) 1 NC_007964.1 PAS/PAC sensor signal transduction histidine kinase 1411220 4032185 Nham_1249 Nitrobacter hamburgensis X14 PAS/PAC sensor signal transduction histidine kinase YP_576536.1 1408125 R 323097 CDS YP_576537.1 92116808 4032186 1411501..1411884 1 NC_007964.1 phasin 2 1411884 4032186 Nham_1250 Nitrobacter hamburgensis X14 phasin 2 YP_576537.1 1411501 D 323097 CDS YP_576538.1 92116809 4032187 1412141..1412554 1 NC_007964.1 phasin 2 1412554 4032187 Nham_1251 Nitrobacter hamburgensis X14 phasin 2 YP_576538.1 1412141 D 323097 CDS YP_576539.1 92116810 4032189 1413232..1413450 1 NC_007964.1 hypothetical protein 1413450 4032189 Nham_1252 Nitrobacter hamburgensis X14 hypothetical protein YP_576539.1 1413232 D 323097 CDS YP_576540.1 92116811 4032190 1413980..1415410 1 NC_007964.1 hypothetical protein 1415410 4032190 Nham_1253 Nitrobacter hamburgensis X14 hypothetical protein YP_576540.1 1413980 D 323097 CDS YP_576541.1 92116812 4032191 1416191..1416460 1 NC_007964.1 hypothetical protein 1416460 4032191 Nham_1254 Nitrobacter hamburgensis X14 hypothetical protein YP_576541.1 1416191 D 323097 CDS YP_576542.1 92116813 4032192 complement(1416504..1417574) 1 NC_007964.1 polysaccharide deacetylase 1417574 4032192 Nham_1255 Nitrobacter hamburgensis X14 polysaccharide deacetylase YP_576542.1 1416504 R 323097 CDS YP_576543.1 92116814 4032193 complement(1417833..1418609) 1 NC_007964.1 hypothetical protein 1418609 4032193 Nham_1256 Nitrobacter hamburgensis X14 hypothetical protein YP_576543.1 1417833 R 323097 CDS YP_576544.1 92116815 4032194 complement(1418862..1419239) 1 NC_007964.1 hypothetical protein 1419239 4032194 Nham_1257 Nitrobacter hamburgensis X14 hypothetical protein YP_576544.1 1418862 R 323097 CDS YP_576545.1 92116816 4032195 1419736..1420461 1 NC_007964.1 Crp/FNR family transcriptional regulator 1420461 4032195 Nham_1258 Nitrobacter hamburgensis X14 Crp/FNR family transcriptional regulator YP_576545.1 1419736 D 323097 CDS YP_576546.1 92116817 4032196 1421231..1421383 1 NC_007964.1 hypothetical protein 1421383 4032196 Nham_1259 Nitrobacter hamburgensis X14 hypothetical protein YP_576546.1 1421231 D 323097 CDS YP_576547.1 92116818 4032197 complement(1421560..1421802) 1 NC_007964.1 hypothetical protein 1421802 4032197 Nham_1260 Nitrobacter hamburgensis X14 hypothetical protein YP_576547.1 1421560 R 323097 CDS YP_576548.1 92116819 4032198 1421887..1422048 1 NC_007964.1 transposase IS3/IS911 1422048 4032198 Nham_1261 Nitrobacter hamburgensis X14 transposase IS3/IS911 YP_576548.1 1421887 D 323097 CDS YP_576549.1 92116820 4032199 complement(1422063..1422305) 1 NC_007964.1 hypothetical protein 1422305 4032199 Nham_1262 Nitrobacter hamburgensis X14 hypothetical protein YP_576549.1 1422063 R 323097 CDS YP_576550.1 92116821 4032200 1422390..1422755 1 NC_007964.1 transposase IS3/IS911 1422755 4032200 Nham_1263 Nitrobacter hamburgensis X14 transposase IS3/IS911 YP_576550.1 1422390 D 323097 CDS YP_576551.1 92116822 4032201 1422756..1423172 1 NC_007964.1 transposase 1423172 4032201 Nham_1264 Nitrobacter hamburgensis X14 transposase YP_576551.1 1422756 D 323097 CDS YP_576552.1 92116823 4032165 complement(1423812..1424834) 1 NC_007964.1 transposase, IS4 1424834 4032165 Nham_1266 Nitrobacter hamburgensis X14 transposase, IS4 YP_576552.1 1423812 R 323097 CDS YP_576553.1 92116824 4032167 complement(1425581..1425826) 1 NC_007964.1 CsbD-like protein 1425826 4032167 Nham_1268 Nitrobacter hamburgensis X14 CsbD-like protein YP_576553.1 1425581 R 323097 CDS YP_576554.1 92116825 4032168 1426288..1426989 1 NC_007964.1 hypothetical protein 1426989 4032168 Nham_1269 Nitrobacter hamburgensis X14 hypothetical protein YP_576554.1 1426288 D 323097 CDS YP_576555.1 92116826 4032169 complement(1427367..1428236) 1 NC_007964.1 negative regulator of AmpC, AmpD 1428236 4032169 Nham_1270 Nitrobacter hamburgensis X14 negative regulator of AmpC, AmpD YP_576555.1 1427367 R 323097 CDS YP_576556.1 92116827 4032170 1428576..1429775 1 NC_007964.1 S-adenosyl-methyltransferase MraW 1429775 mraW 4032170 mraW Nitrobacter hamburgensis X14 S-adenosyl-methyltransferase MraW YP_576556.1 1428576 D 323097 CDS YP_576557.1 92116828 4032171 1429779..1430159 1 NC_007964.1 hypothetical protein 1430159 4032171 Nham_1272 Nitrobacter hamburgensis X14 hypothetical protein YP_576557.1 1429779 D 323097 CDS YP_576558.1 92116829 4032172 1430156..1431913 1 NC_007964.1 peptidoglycan glycosyltransferase 1431913 4032172 Nham_1273 Nitrobacter hamburgensis X14 peptidoglycan glycosyltransferase YP_576558.1 1430156 D 323097 CDS YP_576559.1 92116830 4032173 1431950..1433407 1 NC_007964.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1433407 murE 4032173 murE Nitrobacter hamburgensis X14 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_576559.1 1431950 D 323097 CDS YP_576560.1 92116831 4032174 1433404..1434840 1 NC_007964.1 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase 1434840 4032174 Nham_1275 Nitrobacter hamburgensis X14 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase YP_576560.1 1433404 D 323097 CDS YP_576561.1 92116832 4032175 1434852..1435958 1 NC_007964.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1435958 mraY 4032175 mraY Nitrobacter hamburgensis X14 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_576561.1 1434852 D 323097 CDS YP_576562.1 92116833 4032176 1436077..1437477 1 NC_007964.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 1437477 murD 4032176 murD Nitrobacter hamburgensis X14 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_576562.1 1436077 D 323097 CDS YP_576563.1 92116834 4032177 1437691..1438839 1 NC_007964.1 cell cycle protein 1438839 4032177 Nham_1278 Nitrobacter hamburgensis X14 cell cycle protein YP_576563.1 1437691 D 323097 CDS YP_576564.1 92116835 4032178 1438956..1440068 1 NC_007964.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1440068 murG 4032178 murG Nitrobacter hamburgensis X14 UDPdiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_576564.1 1438956 D 323097 CDS YP_576565.1 92116836 4032179 1440170..1441573 1 NC_007964.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 1441573 murC 4032179 murC Nitrobacter hamburgensis X14 UDP-N-acetylmuramate--L-alanine ligase YP_576565.1 1440170 D 323097 CDS YP_576566.1 92116837 4032180 1441600..1442085 1 NC_007964.1 hypothetical protein 1442085 4032180 Nham_1281 Nitrobacter hamburgensis X14 hypothetical protein YP_576566.1 1441600 D 323097 CDS YP_576567.1 92116838 4032181 1442085..1443002 1 NC_007964.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 1443002 murB 4032181 murB Nitrobacter hamburgensis X14 UDP-N-acetylenolpyruvoylglucosamine reductase YP_576567.1 1442085 D 323097 CDS YP_576568.1 92116839 4032182 1443108..1444130 1 NC_007964.1 D-alanine--D-alanine ligase 1444130 4032182 Nham_1283 Nitrobacter hamburgensis X14 D-alanine--D-alanine ligase YP_576568.1 1443108 D 323097 CDS YP_576569.1 92116840 4032183 1444583..1445623 1 NC_007964.1 cell division protein FtsQ 1445623 4032183 Nham_1284 Nitrobacter hamburgensis X14 cell division protein FtsQ YP_576569.1 1444583 D 323097 CDS YP_576570.1 92116841 4032126 1445620..1446942 1 NC_007964.1 cell division protein FtsA 1446942 4032126 Nham_1285 Nitrobacter hamburgensis X14 cell division protein FtsA YP_576570.1 1445620 D 323097 CDS YP_576571.1 92116842 4032127 1447034..1448857 1 NC_007964.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 1448857 4032127 Nham_1286 Nitrobacter hamburgensis X14 cell division protein FtsZ YP_576571.1 1447034 D 323097 CDS YP_576572.1 92116843 4032128 1449196..1450152 1 NC_007964.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1450152 lpxC 4032128 lpxC Nitrobacter hamburgensis X14 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_576572.1 1449196 D 323097 CDS YP_576573.1 92116844 4032129 1450594..1451571 1 NC_007964.1 lipoprotein 1451571 4032129 Nham_1288 Nitrobacter hamburgensis X14 lipoprotein YP_576573.1 1450594 D 323097 CDS YP_576574.1 92116845 4032130 1451653..1453338 1 NC_007964.1 DNA repair protein RecN 1453338 4032130 Nham_1289 Nitrobacter hamburgensis X14 DNA repair protein RecN YP_576574.1 1451653 D 323097 CDS YP_576575.1 92116846 4032131 1453345..1455489 1 NC_007964.1 NAD-dependent DNA ligase 1455489 4032131 Nham_1290 Nitrobacter hamburgensis X14 NAD-dependent DNA ligase YP_576575.1 1453345 D 323097 CDS YP_576576.1 92116847 4032132 complement(1455533..1456237) 1 NC_007964.1 fumarylacetoacetate (FAA) hydrolase 1456237 4032132 Nham_1291 Nitrobacter hamburgensis X14 fumarylacetoacetate (FAA) hydrolase YP_576576.1 1455533 R 323097 CDS YP_576577.1 92116848 4032133 complement(1456300..1458105) 1 NC_007964.1 ABC transporter 1458105 4032133 Nham_1292 Nitrobacter hamburgensis X14 ABC transporter YP_576577.1 1456300 R 323097 CDS YP_576578.1 92116849 4032134 complement(1458228..1459238) 1 NC_007964.1 UDP-glucose 4-epimerase 1459238 4032134 Nham_1293 Nitrobacter hamburgensis X14 UDP-glucose 4-epimerase YP_576578.1 1458228 R 323097 CDS YP_576579.1 92116850 4032135 1459428..1460372 1 NC_007964.1 lipopolysaccharide heptosyltransferase I 1460372 4032135 Nham_1294 Nitrobacter hamburgensis X14 lipopolysaccharide heptosyltransferase I YP_576579.1 1459428 D 323097 CDS YP_576580.1 92116851 4032136 complement(1460373..1460924) 1 NC_007964.1 HAD family hydrolase 1460924 4032136 Nham_1295 Nitrobacter hamburgensis X14 HAD family hydrolase YP_576580.1 1460373 R 323097 CDS YP_576581.1 92116852 4032137 complement(1460921..1461514) 1 NC_007964.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 1461514 4032137 Nham_1296 Nitrobacter hamburgensis X14 phosphoheptose isomerase YP_576581.1 1460921 R 323097 CDS YP_576582.1 92116853 4032138 complement(1461701..1462774) 1 NC_007964.1 lipopolysaccharide heptosyltransferase II 1462774 4032138 Nham_1297 Nitrobacter hamburgensis X14 lipopolysaccharide heptosyltransferase II YP_576582.1 1461701 R 323097 CDS YP_576583.1 92116854 4032139 1462956..1463936 1 NC_007964.1 ADP-L-glycero-D-manno-heptose-6-epimerase 1463936 4032139 Nham_1298 Nitrobacter hamburgensis X14 ADP-L-glycero-D-manno-heptose-6-epimerase YP_576583.1 1462956 D 323097 CDS YP_576584.1 92116855 4032140 1464059..1465528 1 NC_007964.1 bifunctional ADP-heptose synthase 1465528 4032140 Nham_1299 Nitrobacter hamburgensis X14 bifunctional ADP-heptose synthase YP_576584.1 1464059 D 323097 CDS YP_576585.1 92116856 4032141 1465593..1467521 1 NC_007964.1 polysaccharide biosynthesis protein CapD 1467521 4032141 Nham_1300 Nitrobacter hamburgensis X14 polysaccharide biosynthesis protein CapD YP_576585.1 1465593 D 323097 CDS YP_576586.1 92116857 4032142 complement(1467565..1468617) 1 NC_007964.1 hypothetical protein 1468617 4032142 Nham_1301 Nitrobacter hamburgensis X14 hypothetical protein YP_576586.1 1467565 R 323097 CDS YP_576587.1 92116858 4032143 1468712..1469731 1 NC_007964.1 NAD-dependent epimerase/dehydratase 1469731 4032143 Nham_1302 Nitrobacter hamburgensis X14 NAD-dependent epimerase/dehydratase YP_576587.1 1468712 D 323097 CDS YP_576588.1 92116859 4032144 1469921..1471333 1 NC_007964.1 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1471333 4032144 Nham_1303 Nitrobacter hamburgensis X14 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_576588.1 1469921 D 323097 CDS YP_576589.1 92116860 4032145 1471667..1472707 1 NC_007964.1 oxidoreductase-like 1472707 4032145 Nham_1304 Nitrobacter hamburgensis X14 oxidoreductase-like YP_576589.1 1471667 D 323097 CDS YP_576590.1 92116861 4032107 1472724..1473872 1 NC_007964.1 DegT/DnrJ/EryC1/StrS aminotransferase 1473872 4032107 Nham_1305 Nitrobacter hamburgensis X14 DegT/DnrJ/EryC1/StrS aminotransferase YP_576590.1 1472724 D 323097 CDS YP_576591.1 92116862 4032108 1473916..1475442 1 NC_007964.1 integral membrane protein MviN 1475442 4032108 Nham_1306 Nitrobacter hamburgensis X14 integral membrane protein MviN YP_576591.1 1473916 D 323097 CDS YP_576592.1 92116863 4032109 1475506..1477809 1 NC_007964.1 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase 1477809 4032109 Nham_1307 Nitrobacter hamburgensis X14 molybdopterin binding aldehyde oxidase and xanthine dehydrogenase YP_576592.1 1475506 D 323097 CDS YP_576593.1 92116864 4032110 complement(1477892..1478314) 1 NC_007964.1 CHRD 1478314 4032110 Nham_1308 Nitrobacter hamburgensis X14 CHRD YP_576593.1 1477892 R 323097 CDS YP_576594.1 92116865 4032111 complement(1478661..1478906) 1 NC_007964.1 AsnC family transcriptional regulator 1478906 4032111 Nham_1309 Nitrobacter hamburgensis X14 AsnC family transcriptional regulator YP_576594.1 1478661 R 323097 CDS YP_576595.1 92116866 4032112 1479098..1479904 1 NC_007964.1 phosphomethylpyrimidine kinase 1479904 4032112 Nham_1310 Nitrobacter hamburgensis X14 phosphomethylpyrimidine kinase YP_576595.1 1479098 D 323097 CDS YP_576596.1 92116867 4032113 1479984..1480781 1 NC_007964.1 metallophosphoesterase 1480781 4032113 Nham_1311 Nitrobacter hamburgensis X14 metallophosphoesterase YP_576596.1 1479984 D 323097 CDS YP_576597.1 92116868 4032114 1480782..1481831 1 NC_007964.1 group 1 glycosyl transferase 1481831 4032114 Nham_1312 Nitrobacter hamburgensis X14 group 1 glycosyl transferase YP_576597.1 1480782 D 323097 CDS YP_576598.1 92116869 4032115 complement(1481862..1483001) 1 NC_007964.1 hypothetical protein 1483001 4032115 Nham_1313 Nitrobacter hamburgensis X14 hypothetical protein YP_576598.1 1481862 R 323097 CDS YP_576599.1 92116870 4032116 complement(1483059..1484069) 1 NC_007964.1 mandelate racemase/muconate lactonizing enzyme 1484069 4032116 Nham_1314 Nitrobacter hamburgensis X14 mandelate racemase/muconate lactonizing enzyme YP_576599.1 1483059 R 323097 CDS YP_576600.1 92116871 4032117 1484174..1485307 1 NC_007964.1 hypothetical protein 1485307 4032117 Nham_1315 Nitrobacter hamburgensis X14 hypothetical protein YP_576600.1 1484174 D 323097 CDS YP_576601.1 92116872 4032118 1485310..1486080 1 NC_007964.1 ABC transporter 1486080 4032118 Nham_1316 Nitrobacter hamburgensis X14 ABC transporter YP_576601.1 1485310 D 323097 CDS YP_576602.1 92116873 4032119 1486101..1486982 1 NC_007964.1 hypothetical protein 1486982 4032119 Nham_1317 Nitrobacter hamburgensis X14 hypothetical protein YP_576602.1 1486101 D 323097 CDS YP_576603.1 92116874 4032120 complement(1487359..1492911) 1 NC_007964.1 hypothetical protein 1492911 4032120 Nham_1318 Nitrobacter hamburgensis X14 hypothetical protein YP_576603.1 1487359 R 323097 CDS YP_576604.1 92116875 4032121 1493321..1493668 1 NC_007964.1 Hpt domain-containing protein 1493668 4032121 Nham_1319 Nitrobacter hamburgensis X14 Hpt domain-containing protein YP_576604.1 1493321 D 323097 CDS YP_576605.1 92116876 4032122 1493798..1494118 1 NC_007964.1 ferredoxin 1494118 4032122 Nham_1320 Nitrobacter hamburgensis X14 ferredoxin YP_576605.1 1493798 D 323097 CDS YP_576606.1 92116877 4032123 1494396..1495424 1 NC_007964.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1495424 4032123 Nham_1321 Nitrobacter hamburgensis X14 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_576606.1 1494396 D 323097 CDS YP_576607.1 92116878 4032125 complement(1496371..1498476) 1 NC_007964.1 hypothetical protein 1498476 4032125 Nham_1323 Nitrobacter hamburgensis X14 hypothetical protein YP_576607.1 1496371 R 323097 CDS YP_576608.1 92116879 4032087 complement(1498677..1499783) 1 NC_007964.1 hypothetical protein 1499783 4032087 Nham_1324 Nitrobacter hamburgensis X14 hypothetical protein YP_576608.1 1498677 R 323097 CDS YP_576609.1 92116880 4032088 complement(1500248..1500682) 1 NC_007964.1 hypothetical protein 1500682 4032088 Nham_1325 Nitrobacter hamburgensis X14 hypothetical protein YP_576609.1 1500248 R 323097 CDS YP_576610.1 92116881 4032089 1500740..1501336 1 NC_007964.1 hypothetical protein 1501336 4032089 Nham_1326 Nitrobacter hamburgensis X14 hypothetical protein YP_576610.1 1500740 D 323097 CDS YP_576611.1 92116882 4032090 complement(1501358..1501783) 1 NC_007964.1 hypothetical protein 1501783 4032090 Nham_1327 Nitrobacter hamburgensis X14 hypothetical protein YP_576611.1 1501358 R 323097 CDS YP_576612.1 92116883 4032091 complement(1501923..1502462) 1 NC_007964.1 phosphohistidine phosphatase, SixA 1502462 4032091 Nham_1328 Nitrobacter hamburgensis X14 phosphohistidine phosphatase, SixA YP_576612.1 1501923 R 323097 CDS YP_576613.1 92116884 4032092 1502963..1504336 1 NC_007964.1 FAD dependent oxidoreductase 1504336 4032092 Nham_1329 Nitrobacter hamburgensis X14 FAD dependent oxidoreductase YP_576613.1 1502963 D 323097 CDS YP_576614.1 92116885 4032093 1504461..1504976 1 NC_007964.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 1504976 4032093 Nham_1330 Nitrobacter hamburgensis X14 methionine sulfoxide reductase B YP_576614.1 1504461 D 323097 CDS YP_576615.1 92116886 4032094 1505430..1507277 1 NC_007964.1 flagellar basal body FlaE 1507277 4032094 Nham_1331 Nitrobacter hamburgensis X14 flagellar basal body FlaE YP_576615.1 1505430 D 323097 CDS YP_576616.1 92116887 4032095 1507399..1509258 1 NC_007964.1 flagellar hook-associated protein 1509258 4032095 Nham_1332 Nitrobacter hamburgensis X14 flagellar hook-associated protein YP_576616.1 1507399 D 323097 CDS YP_576617.1 92116888 4032096 1509304..1511067 1 NC_007964.1 hypothetical protein 1511067 4032096 Nham_1333 Nitrobacter hamburgensis X14 hypothetical protein YP_576617.1 1509304 D 323097 CDS YP_576618.1 92116889 4032097 1511429..1512922 1 NC_007964.1 pyridoxal-dependent decarboxylase 1512922 4032097 Nham_1334 Nitrobacter hamburgensis X14 pyridoxal-dependent decarboxylase YP_576618.1 1511429 D 323097 CDS YP_576619.1 92116890 4032098 complement(1512952..1513383) 1 NC_007964.1 post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA; Bradyrhizobium has one thick and several thin flagella, the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar biosynthesis repressor FlbT 1513383 flbT 4032098 flbT Nitrobacter hamburgensis X14 flagellar biosynthesis repressor FlbT YP_576619.1 1512952 R 323097 CDS YP_576620.1 92116891 4032099 1513747..1515333 1 NC_007964.1 hypothetical protein 1515333 4032099 Nham_1336 Nitrobacter hamburgensis X14 hypothetical protein YP_576620.1 1513747 D 323097 CDS YP_576621.1 92116892 4032100 1515725..1517338 1 NC_007964.1 hypothetical protein 1517338 4032100 Nham_1337 Nitrobacter hamburgensis X14 hypothetical protein YP_576621.1 1515725 D 323097 CDS YP_576622.1 92116893 4032101 1517493..1517858 1 NC_007964.1 acts as an activator of flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum; flagellar biosynthesis regulatory protein FlaF 1517858 flaF 4032101 flaF Nitrobacter hamburgensis X14 flagellar biosynthesis regulatory protein FlaF YP_576622.1 1517493 D 323097 CDS YP_576623.1 92116894 4032102 1517887..1518252 1 NC_007964.1 hypothetical protein 1518252 4032102 Nham_1339 Nitrobacter hamburgensis X14 hypothetical protein YP_576623.1 1517887 D 323097 CDS YP_576624.1 92116895 4032103 complement(1518300..1518665) 1 NC_007964.1 hypothetical protein 1518665 4032103 Nham_1340 Nitrobacter hamburgensis X14 hypothetical protein YP_576624.1 1518300 R 323097 CDS YP_576625.1 92116896 4032104 complement(1518869..1521991) 1 NC_007964.1 Outer membrane autotransporter barrel 1521991 4032104 Nham_1341 Nitrobacter hamburgensis X14 Outer membrane autotransporter barrel YP_576625.1 1518869 R 323097 CDS YP_576626.1 92116897 4032105 complement(1522180..1522671) 1 NC_007964.1 hypothetical protein 1522671 4032105 Nham_1342 Nitrobacter hamburgensis X14 hypothetical protein YP_576626.1 1522180 R 323097 CDS YP_576627.1 92116898 4032106 complement(1522668..1523063) 1 NC_007964.1 chemotactic signal-response protein CheL 1523063 4032106 Nham_1343 Nitrobacter hamburgensis X14 chemotactic signal-response protein CheL YP_576627.1 1522668 R 323097 CDS YP_576628.1 92116899 4031815 complement(1523063..1524187) 1 NC_007964.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 1524187 flgI 4031815 flgI Nitrobacter hamburgensis X14 flagellar basal body P-ring protein YP_576628.1 1523063 R 323097 CDS YP_576629.1 92116900 4031816 1524525..1524938 1 NC_007964.1 regulator of the sigma 54 transcriptional activator FlbD; represses FlbD when the class II flagellar structure is absent and activates FlbD when the structure is present; flagellar assembly regulator FliX 1524938 fliX 4031816 fliX Nitrobacter hamburgensis X14 flagellar assembly regulator FliX YP_576629.1 1524525 D 323097 CDS YP_576630.1 92116901 4031817 1525147..1525563 1 NC_007964.1 TraR/DksA family transcriptional regulator 1525563 4031817 Nham_1346 Nitrobacter hamburgensis X14 TraR/DksA family transcriptional regulator YP_576630.1 1525147 D 323097 CDS YP_576631.1 92116902 4031818 complement(1525852..1526133) 1 NC_007964.1 hypothetical protein 1526133 4031818 Nham_1347 Nitrobacter hamburgensis X14 hypothetical protein YP_576631.1 1525852 R 323097 CDS YP_576632.1 92116903 4031819 1526348..1527088 1 NC_007964.1 hypothetical protein 1527088 4031819 Nham_1348 Nitrobacter hamburgensis X14 hypothetical protein YP_576632.1 1526348 D 323097 CDS YP_576633.1 92116904 4031820 1527088..1527813 1 NC_007964.1 hypothetical protein 1527813 4031820 Nham_1349 Nitrobacter hamburgensis X14 hypothetical protein YP_576633.1 1527088 D 323097 CDS YP_576634.1 92116905 4031821 complement(1527830..1528918) 1 NC_007964.1 hypothetical protein 1528918 4031821 Nham_1350 Nitrobacter hamburgensis X14 hypothetical protein YP_576634.1 1527830 R 323097 CDS YP_576635.1 92116906 4031822 complement(1528984..1529574) 1 NC_007964.1 hypothetical protein 1529574 4031822 Nham_1351 Nitrobacter hamburgensis X14 hypothetical protein YP_576635.1 1528984 R 323097 CDS YP_576636.1 92116907 4031823 complement(1529896..1532682) 1 NC_007964.1 helicase-like protein 1532682 4031823 Nham_1352 Nitrobacter hamburgensis X14 helicase-like protein YP_576636.1 1529896 R 323097 CDS YP_576637.1 92116908 4031824 complement(1532689..1535676) 1 NC_007964.1 DNA methylase containing a Zn-ribbon 1535676 4031824 Nham_1353 Nitrobacter hamburgensis X14 DNA methylase containing a Zn-ribbon YP_576637.1 1532689 R 323097 CDS YP_576638.1 92116909 4031825 complement(1535688..1536269) 1 NC_007964.1 hypothetical protein 1536269 4031825 Nham_1354 Nitrobacter hamburgensis X14 hypothetical protein YP_576638.1 1535688 R 323097 CDS YP_576639.1 92116910 4031826 complement(1536266..1539454) 1 NC_007964.1 hypothetical protein 1539454 4031826 Nham_1355 Nitrobacter hamburgensis X14 hypothetical protein YP_576639.1 1536266 R 323097 CDS YP_576640.1 92116911 4031827 complement(1539421..1539618) 1 NC_007964.1 hypothetical protein 1539618 4031827 Nham_1356 Nitrobacter hamburgensis X14 hypothetical protein YP_576640.1 1539421 R 323097 CDS YP_576641.1 92116912 4031828 1539878..1540408 1 NC_007964.1 hypothetical protein 1540408 4031828 Nham_1357 Nitrobacter hamburgensis X14 hypothetical protein YP_576641.1 1539878 D 323097 CDS YP_576642.1 92116913 4031829 1540415..1540960 1 NC_007964.1 hypothetical protein 1540960 4031829 Nham_1358 Nitrobacter hamburgensis X14 hypothetical protein YP_576642.1 1540415 D 323097 CDS YP_576643.1 92116914 4031830 1541165..1541944 1 NC_007964.1 metallophosphoesterase 1541944 4031830 Nham_1359 Nitrobacter hamburgensis X14 metallophosphoesterase YP_576643.1 1541165 D 323097 CDS YP_576644.1 92116915 4031831 1542040..1542627 1 NC_007964.1 hypothetical protein 1542627 4031831 Nham_1360 Nitrobacter hamburgensis X14 hypothetical protein YP_576644.1 1542040 D 323097 CDS YP_576645.1 92116916 4031832 1542624..1544738 1 NC_007964.1 ATPase AAA 1544738 4031832 Nham_1361 Nitrobacter hamburgensis X14 ATPase AAA YP_576645.1 1542624 D 323097 CDS YP_576646.1 92116917 4031833 complement(1544742..1545092) 1 NC_007964.1 hypothetical protein 1545092 4031833 Nham_1362 Nitrobacter hamburgensis X14 hypothetical protein YP_576646.1 1544742 R 323097 CDS YP_576647.1 92116918 4031834 1545850..1546602 1 NC_007964.1 hypothetical protein 1546602 4031834 Nham_1363 Nitrobacter hamburgensis X14 hypothetical protein YP_576647.1 1545850 D 323097 CDS YP_576648.1 92116919 4031835 1546625..1548973 1 NC_007964.1 integrase catalytic subunit 1548973 4031835 Nham_1364 Nitrobacter hamburgensis X14 integrase catalytic subunit YP_576648.1 1546625 D 323097 CDS YP_576649.1 92116920 4031836 1548991..1550058 1 NC_007964.1 hypothetical protein 1550058 4031836 Nham_1365 Nitrobacter hamburgensis X14 hypothetical protein YP_576649.1 1548991 D 323097 CDS YP_576650.1 92116921 4031837 1550062..1552407 1 NC_007964.1 hypothetical protein 1552407 4031837 Nham_1366 Nitrobacter hamburgensis X14 hypothetical protein YP_576650.1 1550062 D 323097 CDS YP_576651.1 92116922 4031838 complement(1552440..1553378) 1 NC_007964.1 hypothetical protein 1553378 4031838 Nham_1367 Nitrobacter hamburgensis X14 hypothetical protein YP_576651.1 1552440 R 323097 CDS YP_576652.1 92116923 4031839 complement(1553492..1553863) 1 NC_007964.1 hypothetical protein 1553863 4031839 Nham_1368 Nitrobacter hamburgensis X14 hypothetical protein YP_576652.1 1553492 R 323097 CDS YP_576653.1 92116924 4031840 complement(1553860..1555236) 1 NC_007964.1 UBA/THIF-type NAD/FAD binding fold 1555236 4031840 Nham_1369 Nitrobacter hamburgensis X14 UBA/THIF-type NAD/FAD binding fold YP_576653.1 1553860 R 323097 CDS YP_576654.1 92116925 4031841 complement(1555233..1556342) 1 NC_007964.1 hypothetical protein 1556342 4031841 Nham_1370 Nitrobacter hamburgensis X14 hypothetical protein YP_576654.1 1555233 R 323097 CDS YP_576655.1 92116926 4031842 1556479..1557057 1 NC_007964.1 sigma-24 (FecI-like protein) 1557057 4031842 Nham_1371 Nitrobacter hamburgensis X14 sigma-24 (FecI-like protein) YP_576655.1 1556479 D 323097 CDS YP_576656.1 92116927 4031843 1557054..1557476 1 NC_007964.1 hypothetical protein 1557476 4031843 Nham_1372 Nitrobacter hamburgensis X14 hypothetical protein YP_576656.1 1557054 D 323097 CDS YP_576657.1 92116928 4031844 1557473..1558282 1 NC_007964.1 hypothetical protein 1558282 4031844 Nham_1373 Nitrobacter hamburgensis X14 hypothetical protein YP_576657.1 1557473 D 323097 CDS YP_576658.1 92116929 4031845 complement(1558506..1560380) 1 NC_007964.1 cyclic nucleotide-binding domain-containing protein 1560380 4031845 Nham_1374 Nitrobacter hamburgensis X14 cyclic nucleotide-binding domain-containing protein YP_576658.1 1558506 R 323097 CDS YP_576659.1 92116930 4031846 complement(1560637..1560921) 1 NC_007964.1 hypothetical protein 1560921 4031846 Nham_1375 Nitrobacter hamburgensis X14 hypothetical protein YP_576659.1 1560637 R 323097 CDS YP_576660.1 92116931 4031847 1561255..1562061 1 NC_007964.1 ISGsu2, transposase 1562061 4031847 Nham_1376 Nitrobacter hamburgensis X14 ISGsu2, transposase YP_576660.1 1561255 D 323097 CDS YP_576661.1 92116932 4031849 1562498..1563733 1 NC_007964.1 transposase IS116/IS110/IS902 1563733 4031849 Nham_1378 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_576661.1 1562498 D 323097 CDS YP_576662.1 92116933 4031850 complement(1563752..1564852) 1 NC_007964.1 transposase, mutator type 1564852 4031850 Nham_1379 Nitrobacter hamburgensis X14 transposase, mutator type YP_576662.1 1563752 R 323097 CDS YP_576663.1 92116934 4031852 complement(1565398..1566156) 1 NC_007964.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 1566156 flgH 4031852 flgH Nitrobacter hamburgensis X14 flagellar basal body L-ring protein YP_576663.1 1565398 R 323097 CDS YP_576664.1 92116935 4031853 complement(1566162..1567283) 1 NC_007964.1 required for the assembly of the flagellar basal body P-ring; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum; flagellar basal body P-ring biosynthesis protein FlgA 1567283 flgA 4031853 flgA Nitrobacter hamburgensis X14 flagellar basal body P-ring biosynthesis protein FlgA YP_576664.1 1566162 R 323097 CDS YP_576665.1 92116936 4031874 complement(1567391..1568179) 1 NC_007964.1 makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; flagellar basal body rod protein FlgG 1568179 flgG 4031874 flgG Nitrobacter hamburgensis X14 flagellar basal body rod protein FlgG YP_576665.1 1567391 R 323097 CDS YP_576666.1 92116937 4031875 complement(1568192..1568959) 1 NC_007964.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum; flagellar basal body rod protein FlgF 1568959 flgF 4031875 flgF Nitrobacter hamburgensis X14 flagellar basal body rod protein FlgF YP_576666.1 1568192 R 323097 CDS YP_576667.1 92116938 4031876 1569249..1569821 1 NC_007964.1 interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 1569821 fliL 4031876 fliL Nitrobacter hamburgensis X14 flagellar basal body-associated protein FliL YP_576667.1 1569249 D 323097 CDS YP_576668.1 92116939 4031877 1569834..1571039 1 NC_007964.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar motor switch protein FliM 1571039 fliM 4031877 fliM Nitrobacter hamburgensis X14 flagellar motor switch protein FliM YP_576668.1 1569834 D 323097 CDS YP_576669.1 92116940 4031878 1571036..1571470 1 NC_007964.1 hypothetical protein 1571470 4031878 Nham_1387 Nitrobacter hamburgensis X14 hypothetical protein YP_576669.1 1571036 D 323097 CDS YP_576670.1 92116941 4031879 1571467..1572267 1 NC_007964.1 hypothetical protein 1572267 4031879 Nham_1388 Nitrobacter hamburgensis X14 hypothetical protein YP_576670.1 1571467 D 323097 CDS YP_576671.1 92116942 4031880 1572366..1576175 1 NC_007964.1 hypothetical protein 1576175 4031880 Nham_1389 Nitrobacter hamburgensis X14 hypothetical protein YP_576671.1 1572366 D 323097 CDS YP_576672.1 92116943 4031881 complement(1576211..1576966) 1 NC_007964.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 1576966 fliP 4031881 fliP Nitrobacter hamburgensis X14 flagellar biosynthesis protein FliP YP_576672.1 1576211 R 323097 CDS YP_576673.1 92116944 4031882 complement(1576963..1577901) 1 NC_007964.1 hypothetical protein 1577901 4031882 Nham_1391 Nitrobacter hamburgensis X14 hypothetical protein YP_576673.1 1576963 R 323097 CDS YP_576674.1 92116945 4031883 1578260..1578667 1 NC_007964.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar basal body rod protein FlgB 1578667 flgB 4031883 flgB Nitrobacter hamburgensis X14 flagellar basal body rod protein FlgB YP_576674.1 1578260 D 323097 CDS YP_576675.1 92116946 4031884 1578697..1579122 1 NC_007964.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 1579122 flgC 4031884 flgC Nitrobacter hamburgensis X14 flagellar basal body rod protein FlgC YP_576675.1 1578697 D 323097 CDS YP_576676.1 92116947 4031885 1579137..1579448 1 NC_007964.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagella; flagellar hook-basal body protein FliE 1579448 fliE 4031885 fliE Nitrobacter hamburgensis X14 flagellar hook-basal body protein FliE YP_576676.1 1579137 D 323097 CDS YP_576677.1 92116948 4031886 1579593..1579856 1 NC_007964.1 FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar biosynthesis protein FliQ 1579856 fliQ 4031886 fliQ Nitrobacter hamburgensis X14 flagellar biosynthesis protein FliQ YP_576677.1 1579593 D 323097 CDS YP_576678.1 92116949 4031887 1580049..1580819 1 NC_007964.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 1580819 fliR 4031887 fliR Nitrobacter hamburgensis X14 flagellar biosynthesis protein FliR YP_576678.1 1580049 D 323097 CDS YP_576679.1 92116950 4031888 1580833..1581912 1 NC_007964.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 1581912 flhB 4031888 flhB Nitrobacter hamburgensis X14 flagellar biosynthesis protein FlhB YP_576679.1 1580833 D 323097 CDS YP_576680.1 92116951 4031889 1582068..1584629 1 NC_007964.1 multi-sensor hybrid histidine kinase 1584629 4031889 Nham_1398 Nitrobacter hamburgensis X14 multi-sensor hybrid histidine kinase YP_576680.1 1582068 D 323097 CDS YP_576681.1 92116952 4031890 complement(1584727..1585689) 1 NC_007964.1 hypothetical protein 1585689 4031890 Nham_1399 Nitrobacter hamburgensis X14 hypothetical protein YP_576681.1 1584727 R 323097 CDS YP_576682.1 92116953 4031891 1586162..1586932 1 NC_007964.1 hypothetical protein 1586932 4031891 Nham_1400 Nitrobacter hamburgensis X14 hypothetical protein YP_576682.1 1586162 D 323097 CDS YP_576683.1 92116954 4031892 complement(1587101..1587679) 1 NC_007964.1 hypothetical protein 1587679 4031892 Nham_1401 Nitrobacter hamburgensis X14 hypothetical protein YP_576683.1 1587101 R 323097 CDS YP_576684.1 92116955 4032320 complement(1587676..1588254) 1 NC_007964.1 hypothetical protein 1588254 4032320 Nham_1402 Nitrobacter hamburgensis X14 hypothetical protein YP_576684.1 1587676 R 323097 CDS YP_576685.1 92116956 4032321 complement(1588509..1590791) 1 NC_007964.1 penicillin-binding protein 1A 1590791 4032321 Nham_1403 Nitrobacter hamburgensis X14 penicillin-binding protein 1A YP_576685.1 1588509 R 323097 CDS YP_576686.1 92116957 4032322 1591112..1591627 1 NC_007964.1 hypothetical protein 1591627 4032322 Nham_1404 Nitrobacter hamburgensis X14 hypothetical protein YP_576686.1 1591112 D 323097 CDS YP_576687.1 92116958 4032323 1591912..1593471 1 NC_007964.1 major facilitator transporter 1593471 4032323 Nham_1405 Nitrobacter hamburgensis X14 major facilitator transporter YP_576687.1 1591912 D 323097 CDS YP_576688.1 92116959 4032324 1593621..1593785 1 NC_007964.1 Flp/Fap pilin component 1593785 4032324 Nham_1406 Nitrobacter hamburgensis X14 Flp/Fap pilin component YP_576688.1 1593621 D 323097 CDS YP_576689.1 92116960 4032325 1594352..1594843 1 NC_007964.1 hypothetical protein 1594843 4032325 Nham_1407 Nitrobacter hamburgensis X14 hypothetical protein YP_576689.1 1594352 D 323097 CDS YP_576690.1 92116961 4032326 1594836..1596104 1 NC_007964.1 hypothetical protein 1596104 4032326 Nham_1408 Nitrobacter hamburgensis X14 hypothetical protein YP_576690.1 1594836 D 323097 CDS YP_576691.1 92116962 4032327 complement(1596277..1596564) 1 NC_007964.1 excinuclease ABC subunit C 1596564 4032327 Nham_1409 Nitrobacter hamburgensis X14 excinuclease ABC subunit C YP_576691.1 1596277 R 323097 CDS YP_576692.1 92116963 4032328 1596648..1597823 1 NC_007964.1 Phage portal protein, HK97 1597823 4032328 Nham_1410 Nitrobacter hamburgensis X14 Phage portal protein, HK97 YP_576692.1 1596648 D 323097 CDS YP_576693.1 92116964 4032329 1597892..1598104 1 NC_007964.1 hypothetical protein 1598104 4032329 Nham_1411 Nitrobacter hamburgensis X14 hypothetical protein YP_576693.1 1597892 D 323097 CDS YP_576694.1 92116965 4032330 1598104..1598292 1 NC_007964.1 hypothetical protein 1598292 4032330 Nham_1412 Nitrobacter hamburgensis X14 hypothetical protein YP_576694.1 1598104 D 323097 CDS YP_576695.1 92116966 4032331 1598382..1599029 1 NC_007964.1 peptidase U35, phage prohead HK97 1599029 4032331 Nham_1413 Nitrobacter hamburgensis X14 peptidase U35, phage prohead HK97 YP_576695.1 1598382 D 323097 CDS YP_576696.1 92116967 4032332 complement(1599072..1599452) 1 NC_007964.1 hypothetical protein 1599452 4032332 Nham_1414 Nitrobacter hamburgensis X14 hypothetical protein YP_576696.1 1599072 R 323097 CDS YP_576697.1 92116968 4032333 1599481..1600734 1 NC_007964.1 phage major capsid protein, HK97 1600734 4032333 Nham_1415 Nitrobacter hamburgensis X14 phage major capsid protein, HK97 YP_576697.1 1599481 D 323097 CDS YP_576698.1 92116969 4032334 complement(1600912..1601673) 1 NC_007964.1 peptidase S1 and S6, chymotrypsin/Hap 1601673 4032334 Nham_1416 Nitrobacter hamburgensis X14 peptidase S1 and S6, chymotrypsin/Hap YP_576698.1 1600912 R 323097 CDS YP_576699.1 92116970 4032335 1601739..1602308 1 NC_007964.1 hypothetical protein 1602308 4032335 Nham_1417 Nitrobacter hamburgensis X14 hypothetical protein YP_576699.1 1601739 D 323097 CDS YP_576700.1 92116971 4032336 1602334..1602744 1 NC_007964.1 gene transfer agent (GTA) like protein 1602744 4032336 Nham_1418 Nitrobacter hamburgensis X14 gene transfer agent (GTA) like protein YP_576700.1 1602334 D 323097 CDS YP_576701.1 92116972 4032337 1602759..1603166 1 NC_007964.1 Phage major tail protein, TP901-1 1603166 4032337 Nham_1419 Nitrobacter hamburgensis X14 Phage major tail protein, TP901-1 YP_576701.1 1602759 D 323097 CDS YP_576702.1 92116973 4032338 1603313..1603633 1 NC_007964.1 gene transfer agent (GTA) like protein 1603633 4032338 Nham_1420 Nitrobacter hamburgensis X14 gene transfer agent (GTA) like protein YP_576702.1 1603313 D 323097 CDS YP_576703.1 92116974 4032339 1603630..1603842 1 NC_007964.1 hypothetical protein 1603842 4032339 Nham_1421 Nitrobacter hamburgensis X14 hypothetical protein YP_576703.1 1603630 D 323097 CDS YP_576704.1 92116975 4033282 1603835..1604419 1 NC_007964.1 gene transfer agent (GTA) like protein 1604419 4033282 Nham_1422 Nitrobacter hamburgensis X14 gene transfer agent (GTA) like protein YP_576704.1 1603835 D 323097 CDS YP_576705.1 92116976 4033283 1604559..1605200 1 NC_007964.1 hypothetical protein 1605200 4033283 Nham_1423 Nitrobacter hamburgensis X14 hypothetical protein YP_576705.1 1604559 D 323097 CDS YP_576706.1 92116977 4033284 1605197..1606093 1 NC_007964.1 phage protein 1606093 4033284 Nham_1424 Nitrobacter hamburgensis X14 phage protein YP_576706.1 1605197 D 323097 CDS YP_576707.1 92116978 4033285 1606107..1606553 1 NC_007964.1 phage cell wall peptidase, NlpC/P60 1606553 4033285 Nham_1425 Nitrobacter hamburgensis X14 phage cell wall peptidase, NlpC/P60 YP_576707.1 1606107 D 323097 CDS YP_576708.1 92116979 4033286 1606553..1610407 1 NC_007964.1 gene transfer agent (GTA) orfg15, like protein 1610407 4033286 Nham_1426 Nitrobacter hamburgensis X14 gene transfer agent (GTA) orfg15, like protein YP_576708.1 1606553 D 323097 CDS YP_576709.1 92116980 4033287 1610414..1611844 1 NC_007964.1 hypothetical protein 1611844 4033287 Nham_1427 Nitrobacter hamburgensis X14 hypothetical protein YP_576709.1 1610414 D 323097 CDS YP_576710.1 92116981 4033288 complement(1611946..1613754) 1 NC_007964.1 hypothetical protein 1613754 4033288 Nham_1428 Nitrobacter hamburgensis X14 hypothetical protein YP_576710.1 1611946 R 323097 CDS YP_576711.1 92116982 4033289 1613937..1614599 1 NC_007964.1 glycohydrolase 1614599 4033289 Nham_1429 Nitrobacter hamburgensis X14 glycohydrolase YP_576711.1 1613937 D 323097 CDS YP_576712.1 92116983 4033290 1614650..1614889 1 NC_007964.1 hypothetical protein 1614889 4033290 Nham_1430 Nitrobacter hamburgensis X14 hypothetical protein YP_576712.1 1614650 D 323097 CDS YP_576713.1 92116984 4033291 1614913..1615308 1 NC_007964.1 hypothetical protein 1615308 4033291 Nham_1431 Nitrobacter hamburgensis X14 hypothetical protein YP_576713.1 1614913 D 323097 CDS YP_576714.1 92116985 4033292 1615310..1615561 1 NC_007964.1 hypothetical protein 1615561 4033292 Nham_1432 Nitrobacter hamburgensis X14 hypothetical protein YP_576714.1 1615310 D 323097 CDS YP_576715.1 92116986 4033293 1615714..1616385 1 NC_007964.1 two component transcriptional regulator 1616385 4033293 Nham_1433 Nitrobacter hamburgensis X14 two component transcriptional regulator YP_576715.1 1615714 D 323097 CDS YP_576716.1 92116987 4033294 1616375..1617772 1 NC_007964.1 periplasmic sensor signal transduction histidine kinase 1617772 4033294 Nham_1434 Nitrobacter hamburgensis X14 periplasmic sensor signal transduction histidine kinase YP_576716.1 1616375 D 323097 CDS YP_576717.1 92116988 4033295 1617882..1618316 1 NC_007964.1 LipA a lipoprotein 1618316 4033295 Nham_1435 Nitrobacter hamburgensis X14 LipA a lipoprotein YP_576717.1 1617882 D 323097 CDS YP_576718.1 92116989 4033296 1618585..1619979 1 NC_007964.1 hypothetical protein 1619979 4033296 Nham_1436 Nitrobacter hamburgensis X14 hypothetical protein YP_576718.1 1618585 D 323097 CDS YP_576719.1 92116990 4033297 1620146..1621249 1 NC_007964.1 cytochrome c-type biogenesis protein CycH / CcmH 1621249 4033297 Nham_1437 Nitrobacter hamburgensis X14 cytochrome c-type biogenesis protein CycH / CcmH YP_576719.1 1620146 D 323097 CDS YP_576720.1 92116991 4033298 1621284..1621772 1 NC_007964.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 1621772 4033298 Nham_1438 Nitrobacter hamburgensis X14 cytochrome c-type biogenesis protein CcmE YP_576720.1 1621284 D 323097 CDS YP_576721.1 92116992 4033299 1621769..1623751 1 NC_007964.1 cytochrome c-type biogenesis protein CcmF 1623751 4033299 Nham_1439 Nitrobacter hamburgensis X14 cytochrome c-type biogenesis protein CcmF YP_576721.1 1621769 D 323097 CDS YP_576722.1 92116993 4033300 1623771..1624358 1 NC_007964.1 cytochrome C biogenesis protein 1624358 4033300 Nham_1440 Nitrobacter hamburgensis X14 cytochrome C biogenesis protein YP_576722.1 1623771 D 323097 CDS YP_576723.1 92116994 4032842 1624754..1626325 1 NC_007964.1 peptidase S1C, Do 1626325 4032842 Nham_1441 Nitrobacter hamburgensis X14 peptidase S1C, Do YP_576723.1 1624754 D 323097 CDS YP_576724.1 92116995 4032843 1626657..1627349 1 NC_007964.1 two component transcriptional regulator 1627349 4032843 Nham_1442 Nitrobacter hamburgensis X14 two component transcriptional regulator YP_576724.1 1626657 D 323097 CDS YP_576725.1 92116996 4032844 complement(1627598..1628047) 1 NC_007964.1 cytochrome c, class I 1628047 4032844 Nham_1443 Nitrobacter hamburgensis X14 cytochrome c, class I YP_576725.1 1627598 R 323097 CDS YP_576726.1 92116997 4032845 1628614..1629864 1 NC_007964.1 major facilitator transporter 1629864 4032845 Nham_1444 Nitrobacter hamburgensis X14 major facilitator transporter YP_576726.1 1628614 D 323097 CDS YP_576727.1 92116998 4032846 1630253..1630636 1 NC_007964.1 hypothetical protein 1630636 4032846 Nham_1445 Nitrobacter hamburgensis X14 hypothetical protein YP_576727.1 1630253 D 323097 CDS YP_576728.1 92116999 4032847 1630664..1631650 1 NC_007964.1 hypothetical protein 1631650 4032847 Nham_1446 Nitrobacter hamburgensis X14 hypothetical protein YP_576728.1 1630664 D 323097 CDS YP_576729.1 92117000 4032848 1632455..1633915 1 NC_007964.1 periplasmic sensor signal transduction histidine kinase 1633915 4032848 Nham_1447 Nitrobacter hamburgensis X14 periplasmic sensor signal transduction histidine kinase YP_576729.1 1632455 D 323097 CDS YP_576730.1 92117001 4032849 1633912..1636875 1 NC_007964.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 1636875 4032849 Nham_1448 Nitrobacter hamburgensis X14 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_576730.1 1633912 D 323097 CDS YP_576731.1 92117002 4032850 complement(1637015..1639342) 1 NC_007964.1 sensor signal transduction histidine kinase 1639342 4032850 Nham_1449 Nitrobacter hamburgensis X14 sensor signal transduction histidine kinase YP_576731.1 1637015 R 323097 CDS YP_576732.1 92117003 4032851 complement(1639624..1641006) 1 NC_007964.1 cation diffusion facilitator family transporter 1641006 4032851 Nham_1450 Nitrobacter hamburgensis X14 cation diffusion facilitator family transporter YP_576732.1 1639624 R 323097 CDS YP_576733.1 92117004 4032852 complement(1641156..1641512) 1 NC_007964.1 hypothetical protein 1641512 4032852 Nham_1451 Nitrobacter hamburgensis X14 hypothetical protein YP_576733.1 1641156 R 323097 CDS YP_576734.1 92117005 4032853 1641716..1642015 1 NC_007964.1 histone-like DNA-binding protein 1642015 4032853 Nham_1452 Nitrobacter hamburgensis X14 histone-like DNA-binding protein YP_576734.1 1641716 D 323097 CDS YP_576735.1 92117006 4032854 1642301..1642786 1 NC_007964.1 (2Fe-2S)-binding protein 1642786 4032854 Nham_1453 Nitrobacter hamburgensis X14 (2Fe-2S)-binding protein YP_576735.1 1642301 D 323097 CDS YP_576736.1 92117007 4032855 1642871..1645210 1 NC_007964.1 carbon-monoxide dehydrogenase 1645210 4032855 Nham_1454 Nitrobacter hamburgensis X14 carbon-monoxide dehydrogenase YP_576736.1 1642871 D 323097 CDS YP_576737.1 92117008 4032856 1645232..1646032 1 NC_007964.1 carbon-monoxide dehydrogenase 1646032 4032856 Nham_1455 Nitrobacter hamburgensis X14 carbon-monoxide dehydrogenase YP_576737.1 1645232 D 323097 CDS YP_576738.1 92117009 4032857 1646263..1646523 1 NC_007964.1 hypothetical protein 1646523 4032857 Nham_1456 Nitrobacter hamburgensis X14 hypothetical protein YP_576738.1 1646263 D 323097 CDS YP_576739.1 92117010 4032858 1646649..1648004 1 NC_007964.1 hypothetical protein 1648004 4032858 Nham_1457 Nitrobacter hamburgensis X14 hypothetical protein YP_576739.1 1646649 D 323097 CDS YP_576740.1 92117011 4032859 1648016..1648543 1 NC_007964.1 hypothetical protein 1648543 4032859 Nham_1458 Nitrobacter hamburgensis X14 hypothetical protein YP_576740.1 1648016 D 323097 CDS YP_576741.1 92117012 4032860 1648555..1648875 1 NC_007964.1 hypothetical protein 1648875 4032860 Nham_1459 Nitrobacter hamburgensis X14 hypothetical protein YP_576741.1 1648555 D 323097 CDS YP_576742.1 92117013 4032861 complement(1648930..1651425) 1 NC_007964.1 glycogen/starch/alpha-glucan phosphorylase 1651425 4032861 Nham_1460 Nitrobacter hamburgensis X14 glycogen/starch/alpha-glucan phosphorylase YP_576742.1 1648930 R 323097 CDS YP_576743.1 92117014 4032862 complement(1651516..1654368) 1 NC_007964.1 malto-oligosyltrehalose synthase 1654368 4032862 Nham_1461 Nitrobacter hamburgensis X14 malto-oligosyltrehalose synthase YP_576743.1 1651516 R 323097 CDS YP_576744.1 92117015 4032863 complement(1654368..1656131) 1 NC_007964.1 malto-oligosyltrehalose trehalohydrolase 1656131 4032863 Nham_1462 Nitrobacter hamburgensis X14 malto-oligosyltrehalose trehalohydrolase YP_576744.1 1654368 R 323097 CDS YP_576745.1 92117016 4032864 complement(1656128..1658206) 1 NC_007964.1 glycogen debranching protein GlgX 1658206 4032864 Nham_1463 Nitrobacter hamburgensis X14 glycogen debranching protein GlgX YP_576745.1 1656128 R 323097 CDS YP_576746.1 92117017 4032865 complement(1658203..1660353) 1 NC_007964.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 1660353 4032865 Nham_1464 Nitrobacter hamburgensis X14 glycogen branching protein YP_576746.1 1658203 R 323097 CDS YP_576747.1 92117018 4032866 complement(1660369..1663635) 1 NC_007964.1 trehalose synthase-like protein 1663635 4032866 Nham_1465 Nitrobacter hamburgensis X14 trehalose synthase-like protein YP_576747.1 1660369 R 323097 CDS YP_576748.1 92117019 4032867 complement(1663644..1665617) 1 NC_007964.1 alpha amylase 1665617 4032867 Nham_1466 Nitrobacter hamburgensis X14 alpha amylase YP_576748.1 1663644 R 323097 CDS YP_576749.1 92117020 4032868 1665784..1667724 1 NC_007964.1 4-alpha-glucanotransferase 1667724 4032868 Nham_1467 Nitrobacter hamburgensis X14 4-alpha-glucanotransferase YP_576749.1 1665784 D 323097 CDS YP_576750.1 92117021 4032869 complement(1667793..1668305) 1 NC_007964.1 hypothetical protein 1668305 4032869 Nham_1468 Nitrobacter hamburgensis X14 hypothetical protein YP_576750.1 1667793 R 323097 CDS YP_576751.1 92117022 4032870 complement(1668373..1669983) 1 NC_007964.1 sensor signal transduction histidine kinase 1669983 4032870 Nham_1469 Nitrobacter hamburgensis X14 sensor signal transduction histidine kinase YP_576751.1 1668373 R 323097 CDS YP_576752.1 92117023 4032871 complement(1670155..1671024) 1 NC_007964.1 3-hydroxyisobutyrate dehydrogenase 1671024 4032871 Nham_1470 Nitrobacter hamburgensis X14 3-hydroxyisobutyrate dehydrogenase YP_576752.1 1670155 R 323097 CDS YP_576753.1 92117024 4032872 1671331..1671720 1 NC_007964.1 glyoxalase/bleomycin resistance protein/dioxygenase 1671720 4032872 Nham_1471 Nitrobacter hamburgensis X14 glyoxalase/bleomycin resistance protein/dioxygenase YP_576753.1 1671331 D 323097 CDS YP_576754.1 92117025 4032873 1671807..1672991 1 NC_007964.1 chromosome partitioning ATPase 1672991 4032873 Nham_1472 Nitrobacter hamburgensis X14 chromosome partitioning ATPase YP_576754.1 1671807 D 323097 CDS YP_576755.1 92117026 4032874 1673142..1674251 1 NC_007964.1 transposase, IS4 1674251 4032874 Nham_1473 Nitrobacter hamburgensis X14 transposase, IS4 YP_576755.1 1673142 D 323097 CDS YP_576756.1 92117027 4032875 1674566..1675654 1 NC_007964.1 twin-arginine translocation pathway signal 1675654 4032875 Nham_1474 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_576756.1 1674566 D 323097 CDS YP_576757.1 92117028 4032876 complement(1675792..1677402) 1 NC_007964.1 TRAP C4-dicarboxylate transport system permease DctM subunit 1677402 4032876 Nham_1475 Nitrobacter hamburgensis X14 TRAP C4-dicarboxylate transport system permease DctM subunit YP_576757.1 1675792 R 323097 CDS YP_576758.1 92117029 4032877 complement(1677399..1677938) 1 NC_007964.1 tripartite ATP-independent periplasmic transporter DctQ 1677938 4032877 Nham_1476 Nitrobacter hamburgensis X14 tripartite ATP-independent periplasmic transporter DctQ YP_576758.1 1677399 R 323097 CDS YP_576759.1 92117030 4032878 complement(1678170..1679201) 1 NC_007964.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 1679201 moaA 4032878 moaA Nitrobacter hamburgensis X14 molybdenum cofactor biosynthesis protein A YP_576759.1 1678170 R 323097 CDS YP_576760.1 92117031 4032879 complement(1679317..1679787) 1 NC_007964.1 hypothetical protein 1679787 4032879 Nham_1478 Nitrobacter hamburgensis X14 hypothetical protein YP_576760.1 1679317 R 323097 CDS YP_576761.1 92117032 4032880 complement(1679936..1680631) 1 NC_007964.1 phosphoglycolate phosphatase 1680631 4032880 Nham_1479 Nitrobacter hamburgensis X14 phosphoglycolate phosphatase YP_576761.1 1679936 R 323097 CDS YP_576762.1 92117033 4030457 1680951..1681649 1 NC_007964.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1681649 4030457 Nham_1480 Nitrobacter hamburgensis X14 ribose-5-phosphate isomerase A YP_576762.1 1680951 D 323097 CDS YP_576763.1 92117034 4030458 1681672..1682181 1 NC_007964.1 hypothetical protein 1682181 4030458 Nham_1481 Nitrobacter hamburgensis X14 hypothetical protein YP_576763.1 1681672 D 323097 CDS YP_576764.1 92117035 4030459 1682200..1683585 1 NC_007964.1 glutathione reductase 1683585 4030459 Nham_1482 Nitrobacter hamburgensis X14 glutathione reductase YP_576764.1 1682200 D 323097 CDS YP_576765.1 92117036 4030460 1683899..1685287 1 NC_007964.1 phospho-2-dehydro-3-deoxyheptonate aldolase 1685287 4030460 Nham_1483 Nitrobacter hamburgensis X14 phospho-2-dehydro-3-deoxyheptonate aldolase YP_576765.1 1683899 D 323097 CDS YP_576766.1 92117037 4030461 1685289..1685642 1 NC_007964.1 diacylglycerol kinase 1685642 4030461 Nham_1484 Nitrobacter hamburgensis X14 diacylglycerol kinase YP_576766.1 1685289 D 323097 CDS YP_576767.1 92117038 4030462 1685749..1687500 1 NC_007964.1 NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1687500 nadE 4030462 nadE Nitrobacter hamburgensis X14 NAD synthetase YP_576767.1 1685749 D 323097 CDS YP_576768.1 92117039 4030463 complement(1687616..1688728) 1 NC_007964.1 hypothetical protein 1688728 4030463 Nham_1486 Nitrobacter hamburgensis X14 hypothetical protein YP_576768.1 1687616 R 323097 CDS YP_576769.1 92117040 4030464 complement(1689007..1689327) 1 NC_007964.1 hypothetical protein 1689327 4030464 Nham_1487 Nitrobacter hamburgensis X14 hypothetical protein YP_576769.1 1689007 R 323097 CDS YP_576770.1 92117041 4030465 1689586..1691034 1 NC_007964.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1691034 cysS 4030465 cysS Nitrobacter hamburgensis X14 cysteinyl-tRNA synthetase YP_576770.1 1689586 D 323097 CDS YP_576771.1 92117042 4030466 1691337..1691837 1 NC_007964.1 N-acetyltransferase GCN5 1691837 4030466 Nham_1489 Nitrobacter hamburgensis X14 N-acetyltransferase GCN5 YP_576771.1 1691337 D 323097 CDS YP_576772.1 92117043 4030467 1691834..1693432 1 NC_007964.1 alpha-isopropylmalate/homocitrate synthase family transferase 1693432 4030467 Nham_1490 Nitrobacter hamburgensis X14 alpha-isopropylmalate/homocitrate synthase family transferase YP_576772.1 1691834 D 323097 CDS YP_576773.1 92117044 4030468 complement(1693446..1694048) 1 NC_007964.1 hypothetical protein 1694048 4030468 Nham_1491 Nitrobacter hamburgensis X14 hypothetical protein YP_576773.1 1693446 R 323097 CDS YP_576774.1 92117045 4030469 1694260..1696218 1 NC_007964.1 ABC transporter 1696218 4030469 Nham_1492 Nitrobacter hamburgensis X14 ABC transporter YP_576774.1 1694260 D 323097 CDS YP_576775.1 92117046 4030470 1696345..1697091 1 NC_007964.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 1697091 4030470 Nham_1493 Nitrobacter hamburgensis X14 phosphatidylserine decarboxylase YP_576775.1 1696345 D 323097 CDS YP_576776.1 92117047 4030471 1697210..1698088 1 NC_007964.1 CDP-diacylglycerol--serine O-phosphatidyltransferase 1698088 4030471 Nham_1494 Nitrobacter hamburgensis X14 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_576776.1 1697210 D 323097 CDS YP_576777.1 92117048 4030472 1698392..1699165 1 NC_007964.1 MotA/TolQ/ExbB proton channel 1699165 4030472 Nham_1495 Nitrobacter hamburgensis X14 MotA/TolQ/ExbB proton channel YP_576777.1 1698392 D 323097 CDS YP_576778.1 92117049 4030473 1699303..1700133 1 NC_007964.1 OmpA/MotB protein 1700133 4030473 Nham_1496 Nitrobacter hamburgensis X14 OmpA/MotB protein YP_576778.1 1699303 D 323097 CDS YP_576779.1 92117050 4030474 1700183..1702183 1 NC_007964.1 K+ potassium transporter 1702183 4030474 Nham_1497 Nitrobacter hamburgensis X14 K+ potassium transporter YP_576779.1 1700183 D 323097 CDS YP_576780.1 92117051 4030475 1702260..1703369 1 NC_007964.1 transposase, IS4 1703369 4030475 Nham_1498 Nitrobacter hamburgensis X14 transposase, IS4 YP_576780.1 1702260 D 323097 CDS YP_576781.1 92117052 4030476 1703745..1704080 1 NC_007964.1 rhodanese-like protein 1704080 4030476 Nham_1499 Nitrobacter hamburgensis X14 rhodanese-like protein YP_576781.1 1703745 D 323097 CDS YP_576782.1 92117053 4032398 1704096..1705250 1 NC_007964.1 hypothetical protein 1705250 4032398 Nham_1500 Nitrobacter hamburgensis X14 hypothetical protein YP_576782.1 1704096 D 323097 CDS YP_576783.1 92117054 4032399 1705265..1706380 1 NC_007964.1 extracellular solute-binding protein 1706380 4032399 Nham_1501 Nitrobacter hamburgensis X14 extracellular solute-binding protein YP_576783.1 1705265 D 323097 CDS YP_576784.1 92117055 4032400 complement(1706451..1707383) 1 NC_007964.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 1707383 4032400 Nham_1502 Nitrobacter hamburgensis X14 lipid A biosynthesis lauroyl acyltransferase YP_576784.1 1706451 R 323097 CDS YP_576785.1 92117056 4032401 complement(1707392..1708663) 1 NC_007964.1 FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-ACP synthase 1708663 4032401 Nham_1503 Nitrobacter hamburgensis X14 3-oxoacyl-ACP synthase YP_576785.1 1707392 R 323097 CDS YP_576786.1 92117057 4032402 complement(1708697..1709902) 1 NC_007964.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 1709902 4032402 Nham_1504 Nitrobacter hamburgensis X14 3-oxoacyl-ACP synthase YP_576786.1 1708697 R 323097 CDS YP_576787.1 92117058 4032403 complement(1709895..1710368) 1 NC_007964.1 3-hydroxyacyl-ACP dehydratase 1710368 4032403 Nham_1505 Nitrobacter hamburgensis X14 3-hydroxyacyl-ACP dehydratase YP_576787.1 1709895 R 323097 CDS YP_576788.1 92117059 4032404 complement(1710379..1710660) 1 NC_007964.1 Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein 1710660 4032404 Nham_1506 Nitrobacter hamburgensis X14 acyl carrier protein YP_576788.1 1710379 R 323097 CDS YP_576789.1 92117060 4032405 complement(1710899..1711180) 1 NC_007964.1 hypothetical protein 1711180 4032405 Nham_1507 Nitrobacter hamburgensis X14 hypothetical protein YP_576789.1 1710899 R 323097 CDS YP_576790.1 92117061 4032406 complement(1711372..1713126) 1 NC_007964.1 hypothetical protein 1713126 4032406 Nham_1508 Nitrobacter hamburgensis X14 hypothetical protein YP_576790.1 1711372 R 323097 CDS YP_576791.1 92117062 4032408 complement(1713733..1716879) 1 NC_007964.1 acriflavin resistance protein 1716879 4032408 Nham_1509 Nitrobacter hamburgensis X14 acriflavin resistance protein YP_576791.1 1713733 R 323097 CDS YP_576792.1 92117063 4032409 complement(1716881..1718068) 1 NC_007964.1 secretion protein HlyD 1718068 4032409 Nham_1510 Nitrobacter hamburgensis X14 secretion protein HlyD YP_576792.1 1716881 R 323097 CDS YP_576793.1 92117064 4032410 1718181..1718660 1 NC_007964.1 MarR family transcriptional regulator 1718660 4032410 Nham_1511 Nitrobacter hamburgensis X14 MarR family transcriptional regulator YP_576793.1 1718181 D 323097 CDS YP_576794.1 92117065 4032411 1718789..1719028 1 NC_007964.1 hypothetical protein 1719028 4032411 Nham_1512 Nitrobacter hamburgensis X14 hypothetical protein YP_576794.1 1718789 D 323097 CDS YP_576795.1 92117066 4032412 1719291..1721870 1 NC_007964.1 TonB-dependent receptor 1721870 4032412 Nham_1513 Nitrobacter hamburgensis X14 TonB-dependent receptor YP_576795.1 1719291 D 323097 CDS YP_576796.1 92117067 4032413 1721900..1722589 1 NC_007964.1 hydroxylase 1722589 4032413 Nham_1514 Nitrobacter hamburgensis X14 hydroxylase YP_576796.1 1721900 D 323097 CDS YP_576797.1 92117068 4032414 1722598..1723611 1 NC_007964.1 MotA/TolQ/ExbB proton channel 1723611 4032414 Nham_1515 Nitrobacter hamburgensis X14 MotA/TolQ/ExbB proton channel YP_576797.1 1722598 D 323097 CDS YP_576798.1 92117069 4032415 1723615..1724085 1 NC_007964.1 biopolymer transport protein ExbD/TolR 1724085 4032415 Nham_1516 Nitrobacter hamburgensis X14 biopolymer transport protein ExbD/TolR YP_576798.1 1723615 D 323097 CDS YP_576799.1 92117070 4032609 1724089..1724883 1 NC_007964.1 TonB-like 1724883 4032609 Nham_1517 Nitrobacter hamburgensis X14 TonB-like YP_576799.1 1724089 D 323097 CDS YP_576800.1 92117071 4032610 complement(1724941..1725354) 1 NC_007964.1 hypothetical protein 1725354 4032610 Nham_1518 Nitrobacter hamburgensis X14 hypothetical protein YP_576800.1 1724941 R 323097 CDS YP_576801.1 92117072 4032611 complement(1725416..1726120) 1 NC_007964.1 peptidase M50 1726120 4032611 Nham_1519 Nitrobacter hamburgensis X14 peptidase M50 YP_576801.1 1725416 R 323097 CDS YP_576802.1 92117073 4032612 complement(1726244..1727185) 1 NC_007964.1 transcription factor jumonji/aspartyl beta-hydroxylase 1727185 4032612 Nham_1520 Nitrobacter hamburgensis X14 transcription factor jumonji/aspartyl beta-hydroxylase YP_576802.1 1726244 R 323097 CDS YP_576803.1 92117074 4032613 complement(1727182..1728405) 1 NC_007964.1 hypothetical protein 1728405 4032613 Nham_1521 Nitrobacter hamburgensis X14 hypothetical protein YP_576803.1 1727182 R 323097 CDS YP_576804.1 92117075 4032614 1729077..1729364 1 NC_007964.1 hypothetical protein 1729364 4032614 Nham_1522 Nitrobacter hamburgensis X14 hypothetical protein YP_576804.1 1729077 D 323097 CDS YP_576805.1 92117076 4032615 complement(1729563..1729802) 1 NC_007964.1 hypothetical protein 1729802 4032615 Nham_1523 Nitrobacter hamburgensis X14 hypothetical protein YP_576805.1 1729563 R 323097 CDS YP_576806.1 92117077 4032616 1730402..1730860 1 NC_007964.1 hypothetical protein 1730860 4032616 Nham_1524 Nitrobacter hamburgensis X14 hypothetical protein YP_576806.1 1730402 D 323097 CDS YP_576807.1 92117078 4032618 1731848..1732039 1 NC_007964.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 1732039 secE 4032618 secE Nitrobacter hamburgensis X14 preprotein translocase subunit SecE YP_576807.1 1731848 D 323097 CDS YP_576808.1 92117079 4032619 1732072..1732602 1 NC_007964.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 1732602 nusG 4032619 nusG Nitrobacter hamburgensis X14 transcription antitermination protein NusG YP_576808.1 1732072 D 323097 CDS YP_576809.1 92117080 4032620 1732812..1733240 1 NC_007964.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 1733240 rplK 4032620 rplK Nitrobacter hamburgensis X14 50S ribosomal protein L11 YP_576809.1 1732812 D 323097 CDS YP_576810.1 92117081 4032621 1733247..1733939 1 NC_007964.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 1733939 rplA 4032621 rplA Nitrobacter hamburgensis X14 50S ribosomal protein L1 YP_576810.1 1733247 D 323097 CDS YP_576811.1 92117082 4032622 1734660..1735178 1 NC_007964.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 1735178 rplJ 4032622 rplJ Nitrobacter hamburgensis X14 50S ribosomal protein L10 YP_576811.1 1734660 D 323097 CDS YP_576812.1 92117083 4032623 1735233..1735607 1 NC_007964.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 1735607 rplL 4032623 rplL Nitrobacter hamburgensis X14 50S ribosomal protein L7/L12 YP_576812.1 1735233 D 323097 CDS YP_576813.1 92117084 4032624 1736159..1740301 1 NC_007964.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 1740301 rpoB 4032624 rpoB Nitrobacter hamburgensis X14 DNA-directed RNA polymerase subunit beta YP_576813.1 1736159 D 323097 CDS YP_576814.1 92117085 4032625 1740427..1744626 1 NC_007964.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 1744626 4032625 Nham_1532 Nitrobacter hamburgensis X14 DNA-directed RNA polymerase subunit beta' YP_576814.1 1740427 D 323097 CDS YP_576815.1 92117086 4032626 1744927..1746975 1 NC_007964.1 amine oxidase 1746975 4032626 Nham_1533 Nitrobacter hamburgensis X14 amine oxidase YP_576815.1 1744927 D 323097 CDS YP_576816.1 92117087 4032627 1747112..1749118 1 NC_007964.1 ABC transporter 1749118 4032627 Nham_1534 Nitrobacter hamburgensis X14 ABC transporter YP_576816.1 1747112 D 323097 CDS YP_576817.1 92117088 4030689 complement(1749271..1750467) 1 NC_007964.1 monooxygenase, FAD-binding 1750467 4030689 Nham_1535 Nitrobacter hamburgensis X14 monooxygenase, FAD-binding YP_576817.1 1749271 R 323097 CDS YP_576818.1 92117089 4030690 1750642..1751778 1 NC_007964.1 hypothetical protein 1751778 4030690 Nham_1536 Nitrobacter hamburgensis X14 hypothetical protein YP_576818.1 1750642 D 323097 CDS YP_576819.1 92117090 4030691 1751902..1752612 1 NC_007964.1 hypothetical protein 1752612 4030691 Nham_1537 Nitrobacter hamburgensis X14 hypothetical protein YP_576819.1 1751902 D 323097 CDS YP_576820.1 92117091 4030692 1752703..1752939 1 NC_007964.1 hypothetical protein 1752939 4030692 Nham_1538 Nitrobacter hamburgensis X14 hypothetical protein YP_576820.1 1752703 D 323097 CDS YP_576821.1 92117092 4030693 complement(1753045..1753893) 1 NC_007964.1 hypothetical protein 1753893 4030693 Nham_1539 Nitrobacter hamburgensis X14 hypothetical protein YP_576821.1 1753045 R 323097 CDS YP_576822.1 92117093 4030694 1754398..1754769 1 NC_007964.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 1754769 rpsL 4030694 rpsL Nitrobacter hamburgensis X14 30S ribosomal protein S12 YP_576822.1 1754398 D 323097 CDS YP_576823.1 92117094 4030695 1754785..1755255 1 NC_007964.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 1755255 4030695 Nham_1541 Nitrobacter hamburgensis X14 30S ribosomal protein S7 YP_576823.1 1754785 D 323097 CDS YP_576824.1 92117095 4030696 1755288..1757360 1 NC_007964.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1757360 4030696 Nham_1542 Nitrobacter hamburgensis X14 elongation factor G YP_576824.1 1755288 D 323097 CDS YP_576825.1 92117096 4030697 1757400..1758590 1 NC_007964.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1758590 4030697 Nham_1543 Nitrobacter hamburgensis X14 elongation factor Tu YP_576825.1 1757400 D 323097 CDS YP_576826.1 92117097 4030698 1758694..1759002 1 NC_007964.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 1759002 rpsJ 4030698 rpsJ Nitrobacter hamburgensis X14 30S ribosomal protein S10 YP_576826.1 1758694 D 323097 CDS YP_576827.1 92117098 4030699 1759104..1759829 1 NC_007964.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1759829 rplC 4030699 rplC Nitrobacter hamburgensis X14 50S ribosomal protein L3 YP_576827.1 1759104 D 323097 CDS YP_576828.1 92117099 4030700 1759831..1760451 1 NC_007964.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1760451 rplD 4030700 rplD Nitrobacter hamburgensis X14 50S ribosomal protein L4 YP_576828.1 1759831 D 323097 CDS YP_576829.1 92117100 4030701 1760448..1760744 1 NC_007964.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 1760744 rplW 4030701 rplW Nitrobacter hamburgensis X14 50S ribosomal protein L23 YP_576829.1 1760448 D 323097 CDS YP_576830.1 92117101 4030702 1760773..1761606 1 NC_007964.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1761606 rplB 4030702 rplB Nitrobacter hamburgensis X14 50S ribosomal protein L2 YP_576830.1 1760773 D 323097 CDS YP_576831.1 92117102 4030703 1761622..1761900 1 NC_007964.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 1761900 rpsS 4030703 rpsS Nitrobacter hamburgensis X14 30S ribosomal protein S19 YP_576831.1 1761622 D 323097 CDS YP_576832.1 92117103 4030704 1761911..1762297 1 NC_007964.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 1762297 rplV 4030704 rplV Nitrobacter hamburgensis X14 50S ribosomal protein L22 YP_576832.1 1761911 D 323097 CDS YP_576833.1 92117104 4030705 1762317..1763012 1 NC_007964.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 1763012 rpsC 4030705 rpsC Nitrobacter hamburgensis X14 30S ribosomal protein S3 YP_576833.1 1762317 D 323097 CDS YP_576834.1 92117105 4030706 1763040..1763453 1 NC_007964.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1763453 rplP 4030706 rplP Nitrobacter hamburgensis X14 50S ribosomal protein L16 YP_576834.1 1763040 D 323097 CDS YP_576835.1 92117106 4030707 1763459..1763665 1 NC_007964.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 1763665 4030707 Nham_1553 Nitrobacter hamburgensis X14 50S ribosomal protein L29 YP_576835.1 1763459 D 323097 CDS YP_576836.1 92117107 4033128 1763676..1763924 1 NC_007964.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 1763924 rpsQ 4033128 rpsQ Nitrobacter hamburgensis X14 30S ribosomal protein S17 YP_576836.1 1763676 D 323097 CDS YP_576837.1 92117108 4033129 1763964..1764332 1 NC_007964.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 1764332 rplN 4033129 rplN Nitrobacter hamburgensis X14 50S ribosomal protein L14 YP_576837.1 1763964 D 323097 CDS YP_576838.1 92117109 4033130 1764332..1764646 1 NC_007964.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 1764646 rplX 4033130 rplX Nitrobacter hamburgensis X14 50S ribosomal protein L24 YP_576838.1 1764332 D 323097 CDS YP_576839.1 92117110 4033131 1764639..1765196 1 NC_007964.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1765196 rplE 4033131 rplE Nitrobacter hamburgensis X14 50S ribosomal protein L5 YP_576839.1 1764639 D 323097 CDS YP_576840.1 92117111 4033132 1765240..1765545 1 NC_007964.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 1765545 rpsN 4033132 rpsN Nitrobacter hamburgensis X14 30S ribosomal protein S14 YP_576840.1 1765240 D 323097 CDS YP_576841.1 92117112 4033133 1765559..1765957 1 NC_007964.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1765957 rpsH 4033133 rpsH Nitrobacter hamburgensis X14 30S ribosomal protein S8 YP_576841.1 1765559 D 323097 CDS YP_576842.1 92117113 4033134 1766083..1766616 1 NC_007964.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 1766616 rplF 4033134 rplF Nitrobacter hamburgensis X14 50S ribosomal protein L6 YP_576842.1 1766083 D 323097 CDS YP_576843.1 92117114 4033135 1766628..1766990 1 NC_007964.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 1766990 rplR 4033135 rplR Nitrobacter hamburgensis X14 50S ribosomal protein L18 YP_576843.1 1766628 D 323097 CDS YP_576844.1 92117115 4033136 1767062..1767634 1 NC_007964.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 1767634 rpsE 4033136 rpsE Nitrobacter hamburgensis X14 30S ribosomal protein S5 YP_576844.1 1767062 D 323097 CDS YP_576845.1 92117116 4033137 1767714..1767908 1 NC_007964.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 1767908 rpmD 4033137 rpmD Nitrobacter hamburgensis X14 50S ribosomal protein L30 YP_576845.1 1767714 D 323097 CDS YP_576846.1 92117117 4033138 1768023..1768508 1 NC_007964.1 late assembly protein; 50S ribosomal protein L15 1768508 rplO 4033138 rplO Nitrobacter hamburgensis X14 50S ribosomal protein L15 YP_576846.1 1768023 D 323097 CDS YP_576847.1 92117118 4033139 1768659..1769990 1 NC_007964.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 1769990 secY 4033139 secY Nitrobacter hamburgensis X14 preprotein translocase subunit SecY YP_576847.1 1768659 D 323097 CDS YP_576848.1 92117119 4033140 1770413..1771039 1 NC_007964.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1771039 adk 4033140 adk Nitrobacter hamburgensis X14 adenylate kinase YP_576848.1 1770413 D 323097 CDS YP_576849.1 92117120 4033141 1771360..1771728 1 NC_007964.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1771728 rpsM 4033141 rpsM Nitrobacter hamburgensis X14 30S ribosomal protein S13 YP_576849.1 1771360 D 323097 CDS YP_576850.1 92117121 4033142 1771857..1772249 1 NC_007964.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1772249 4033142 Nham_1568 Nitrobacter hamburgensis X14 30S ribosomal protein S11 YP_576850.1 1771857 D 323097 CDS YP_576851.1 92117122 4033143 1772356..1773375 1 NC_007964.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1773375 4033143 Nham_1569 Nitrobacter hamburgensis X14 DNA-directed RNA polymerase subunit alpha YP_576851.1 1772356 D 323097 CDS YP_576852.1 92117123 4033144 1773575..1773991 1 NC_007964.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 1773991 rplQ 4033144 rplQ Nitrobacter hamburgensis X14 50S ribosomal protein L17 YP_576852.1 1773575 D 323097 CDS YP_576853.1 92117124 4033146 1775221..1776627 1 NC_007964.1 peptidase S1C, Do 1776627 4033146 Nham_1572 Nitrobacter hamburgensis X14 peptidase S1C, Do YP_576853.1 1775221 D 323097 CDS YP_576854.1 92117125 4033147 1776624..1777964 1 NC_007964.1 recombination factor protein RarA 1777964 4033147 Nham_1573 Nitrobacter hamburgensis X14 recombination factor protein RarA YP_576854.1 1776624 D 323097 CDS YP_576855.1 92117126 4033051 1777967..1778659 1 NC_007964.1 hypothetical protein 1778659 4033051 Nham_1574 Nitrobacter hamburgensis X14 hypothetical protein YP_576855.1 1777967 D 323097 CDS YP_576856.1 92117127 4033052 1778752..1779987 1 NC_007964.1 pseudouridine synthase RluD 1779987 4033052 Nham_1575 Nitrobacter hamburgensis X14 pseudouridine synthase RluD YP_576856.1 1778752 D 323097 CDS YP_576857.1 92117128 4033053 1780053..1780835 1 NC_007964.1 ATP12 ATPase 1780835 4033053 Nham_1576 Nitrobacter hamburgensis X14 ATP12 ATPase YP_576857.1 1780053 D 323097 CDS YP_576858.1 92117129 4033054 1780885..1782582 1 NC_007964.1 hypothetical protein 1782582 4033054 Nham_1577 Nitrobacter hamburgensis X14 hypothetical protein YP_576858.1 1780885 D 323097 CDS YP_576859.1 92117130 4033055 1782579..1782848 1 NC_007964.1 related to flagellar biosynthesis protein FlhB; type III secretion protein 1782848 4033055 Nham_1578 Nitrobacter hamburgensis X14 type III secretion protein YP_576859.1 1782579 D 323097 CDS YP_576860.1 92117131 4033056 1782933..1784504 1 NC_007964.1 carboxyl transferase 1784504 4033056 Nham_1579 Nitrobacter hamburgensis X14 carboxyl transferase YP_576860.1 1782933 D 323097 CDS YP_576861.1 92117132 4033057 1784612..1784956 1 NC_007964.1 alkylhydroperoxidase AhpD core 1784956 4033057 Nham_1580 Nitrobacter hamburgensis X14 alkylhydroperoxidase AhpD core YP_576861.1 1784612 D 323097 CDS YP_576862.1 92117133 4033058 1785195..1786661 1 NC_007964.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1786661 4033058 Nham_1581 Nitrobacter hamburgensis X14 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_576862.1 1785195 D 323097 CDS YP_576863.1 92117134 4033059 complement(1786658..1787146) 1 NC_007964.1 SmpA/OmlA 1787146 4033059 Nham_1582 Nitrobacter hamburgensis X14 SmpA/OmlA YP_576863.1 1786658 R 323097 CDS YP_576864.1 92117135 4033060 1787254..1787793 1 NC_007964.1 ubiquinol-cytochrome C chaperone 1787793 4033060 Nham_1583 Nitrobacter hamburgensis X14 ubiquinol-cytochrome C chaperone YP_576864.1 1787254 D 323097 CDS YP_576865.1 92117136 4033061 1787790..1788401 1 NC_007964.1 hypothetical protein 1788401 4033061 Nham_1584 Nitrobacter hamburgensis X14 hypothetical protein YP_576865.1 1787790 D 323097 CDS YP_576866.1 92117137 4033062 1788674..1789738 1 NC_007964.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1789738 4033062 Nham_1585 Nitrobacter hamburgensis X14 glycerol-3-phosphate acyltransferase PlsX YP_576866.1 1788674 D 323097 CDS YP_576867.1 92117138 4033063 1789735..1790712 1 NC_007964.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1790712 4033063 Nham_1586 Nitrobacter hamburgensis X14 3-oxoacyl-ACP synthase YP_576867.1 1789735 D 323097 CDS YP_576868.1 92117139 4033064 1790844..1791176 1 NC_007964.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 1791176 ihfA 4033064 ihfA Nitrobacter hamburgensis X14 integration host factor subunit alpha YP_576868.1 1790844 D 323097 CDS YP_576869.1 92117140 4033065 1791322..1791909 1 NC_007964.1 MerR family transcriptional regulator 1791909 4033065 Nham_1588 Nitrobacter hamburgensis X14 MerR family transcriptional regulator YP_576869.1 1791322 D 323097 CDS YP_576870.1 92117141 4033067 1792754..1793350 1 NC_007964.1 hypothetical protein 1793350 4033067 Nham_1589 Nitrobacter hamburgensis X14 hypothetical protein YP_576870.1 1792754 D 323097 CDS YP_576871.1 92117142 4033068 complement(1794323..1794760) 1 NC_007964.1 hypothetical protein 1794760 4033068 Nham_1590 Nitrobacter hamburgensis X14 hypothetical protein YP_576871.1 1794323 R 323097 CDS YP_576872.1 92117143 4029903 complement(1795161..1795637) 1 NC_007964.1 nuclease (SNase-like) 1795637 4029903 Nham_1591 Nitrobacter hamburgensis X14 nuclease (SNase-like) YP_576872.1 1795161 R 323097 CDS YP_576873.1 92117144 4029904 1795829..1796359 1 NC_007964.1 hypothetical protein 1796359 4029904 Nham_1592 Nitrobacter hamburgensis X14 hypothetical protein YP_576873.1 1795829 D 323097 CDS YP_576874.1 92117145 4029906 complement(1796939..1797292) 1 NC_007964.1 hypothetical protein 1797292 4029906 Nham_1593 Nitrobacter hamburgensis X14 hypothetical protein YP_576874.1 1796939 R 323097 CDS YP_576875.1 92117146 4029907 complement(1797837..1798175) 1 NC_007964.1 transposase 1798175 4029907 Nham_1594 Nitrobacter hamburgensis X14 transposase YP_576875.1 1797837 R 323097 CDS YP_576876.1 92117147 4029908 complement(1798223..1798591) 1 NC_007964.1 IS5 family transposase OrfA 1798591 4029908 Nham_1595 Nitrobacter hamburgensis X14 IS5 family transposase OrfA YP_576876.1 1798223 R 323097 CDS YP_576877.1 92117148 4029909 complement(1798668..1799561) 1 NC_007964.1 hypothetical protein 1799561 4029909 Nham_1596 Nitrobacter hamburgensis X14 hypothetical protein YP_576877.1 1798668 R 323097 CDS YP_576878.1 92117149 4029910 complement(1799578..1799826) 1 NC_007964.1 hypothetical protein 1799826 4029910 Nham_1597 Nitrobacter hamburgensis X14 hypothetical protein YP_576878.1 1799578 R 323097 CDS YP_576879.1 92117150 4029911 complement(1799864..1800547) 1 NC_007964.1 hypothetical protein 1800547 4029911 Nham_1598 Nitrobacter hamburgensis X14 hypothetical protein YP_576879.1 1799864 R 323097 CDS YP_576880.1 92117151 4029913 1801042..1801335 1 NC_007964.1 hypothetical protein 1801335 4029913 Nham_1600 Nitrobacter hamburgensis X14 hypothetical protein YP_576880.1 1801042 D 323097 CDS YP_576881.1 92117152 4029914 complement(1801499..1801792) 1 NC_007964.1 hypothetical protein 1801792 4029914 Nham_1601 Nitrobacter hamburgensis X14 hypothetical protein YP_576881.1 1801499 R 323097 CDS YP_576882.1 92117153 4029915 complement(1801793..1802041) 1 NC_007964.1 hypothetical protein 1802041 4029915 Nham_1602 Nitrobacter hamburgensis X14 hypothetical protein YP_576882.1 1801793 R 323097 CDS YP_576883.1 92117154 4029916 1802147..1802503 1 NC_007964.1 hypothetical protein 1802503 4029916 Nham_1603 Nitrobacter hamburgensis X14 hypothetical protein YP_576883.1 1802147 D 323097 CDS YP_576884.1 92117155 4029917 complement(1802688..1803092) 1 NC_007964.1 hypothetical protein 1803092 4029917 Nham_1604 Nitrobacter hamburgensis X14 hypothetical protein YP_576884.1 1802688 R 323097 CDS YP_576885.1 92117156 4029919 complement(1805354..1807402) 1 NC_007964.1 hypothetical protein 1807402 4029919 Nham_1606 Nitrobacter hamburgensis X14 hypothetical protein YP_576885.1 1805354 R 323097 CDS YP_576886.1 92117157 4029920 complement(1807409..1808305) 1 NC_007964.1 Mu-like prophage major head subunit gpT 1808305 4029920 Nham_1607 Nitrobacter hamburgensis X14 Mu-like prophage major head subunit gpT YP_576886.1 1807409 R 323097 CDS YP_576887.1 92117158 4029921 complement(1808302..1809288) 1 NC_007964.1 Mu-like prophage I protein 1809288 4029921 Nham_1608 Nitrobacter hamburgensis X14 Mu-like prophage I protein YP_576887.1 1808302 R 323097 CDS YP_576888.1 92117159 4033301 complement(1809288..1809653) 1 NC_007964.1 hypothetical protein 1809653 4033301 Nham_1609 Nitrobacter hamburgensis X14 hypothetical protein YP_576888.1 1809288 R 323097 CDS YP_576889.1 92117160 4033302 complement(1809929..1810300) 1 NC_007964.1 hypothetical protein 1810300 4033302 Nham_1610 Nitrobacter hamburgensis X14 hypothetical protein YP_576889.1 1809929 R 323097 CDS YP_576890.1 92117161 4033303 complement(1810335..1810679) 1 NC_007964.1 hypothetical protein 1810679 4033303 Nham_1611 Nitrobacter hamburgensis X14 hypothetical protein YP_576890.1 1810335 R 323097 CDS YP_576891.1 92117162 4033304 complement(1810676..1811395) 1 NC_007964.1 hypothetical protein 1811395 4033304 Nham_1612 Nitrobacter hamburgensis X14 hypothetical protein YP_576891.1 1810676 R 323097 CDS YP_576892.1 92117163 4033305 complement(1811398..1813401) 1 NC_007964.1 hypothetical protein 1813401 4033305 Nham_1613 Nitrobacter hamburgensis X14 hypothetical protein YP_576892.1 1811398 R 323097 CDS YP_576893.1 92117164 4033306 complement(1813398..1813619) 1 NC_007964.1 hypothetical protein 1813619 4033306 Nham_1614 Nitrobacter hamburgensis X14 hypothetical protein YP_576893.1 1813398 R 323097 CDS YP_576894.1 92117165 4033307 1813673..1814197 1 NC_007964.1 hypothetical protein 1814197 4033307 Nham_1615 Nitrobacter hamburgensis X14 hypothetical protein YP_576894.1 1813673 D 323097 CDS YP_576895.1 92117166 4033308 1814587..1815675 1 NC_007964.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1815675 recA 4033308 recA Nitrobacter hamburgensis X14 recombinase A YP_576895.1 1814587 D 323097 CDS YP_576896.1 92117167 4033309 complement(1815738..1816028) 1 NC_007964.1 hypothetical protein 1816028 4033309 Nham_1617 Nitrobacter hamburgensis X14 hypothetical protein YP_576896.1 1815738 R 323097 CDS YP_576897.1 92117168 4033310 complement(1816214..1819090) 1 NC_007964.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 1819090 4033310 Nham_1618 Nitrobacter hamburgensis X14 glycine dehydrogenase YP_576897.1 1816214 R 323097 CDS YP_576898.1 92117169 4033311 complement(1819164..1819529) 1 NC_007964.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 1819529 4033311 Nham_1619 Nitrobacter hamburgensis X14 glycine cleavage system protein H YP_576898.1 1819164 R 323097 CDS YP_576899.1 92117170 4033312 complement(1819539..1820702) 1 NC_007964.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 1820702 gcvT 4033312 gcvT Nitrobacter hamburgensis X14 glycine cleavage system aminomethyltransferase T YP_576899.1 1819539 R 323097 CDS YP_576900.1 92117171 4033315 1821179..1823872 1 NC_007964.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1823872 alaS 4033315 alaS Nitrobacter hamburgensis X14 alanyl-tRNA synthetase YP_576900.1 1821179 D 323097 CDS YP_576901.1 92117172 4033316 complement(1823904..1824302) 1 NC_007964.1 hypothetical protein 1824302 4033316 Nham_1622 Nitrobacter hamburgensis X14 hypothetical protein YP_576901.1 1823904 R 323097 CDS YP_576902.1 92117173 4033317 complement(1824372..1825589) 1 NC_007964.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 1825589 4033317 Nham_1623 Nitrobacter hamburgensis X14 isocitrate dehydrogenase YP_576902.1 1824372 R 323097 CDS YP_576903.1 92117174 4033318 1825902..1827134 1 NC_007964.1 RNA methyl transferase TrmH 1827134 4033318 Nham_1624 Nitrobacter hamburgensis X14 RNA methyl transferase TrmH YP_576903.1 1825902 D 323097 CDS YP_576904.1 92117175 4033069 1827420..1827905 1 NC_007964.1 hypothetical protein 1827905 4033069 Nham_1625 Nitrobacter hamburgensis X14 hypothetical protein YP_576904.1 1827420 D 323097 CDS YP_576905.1 92117176 4033070 1828210..1829553 1 NC_007964.1 transposase, IS4 1829553 4033070 Nham_1626 Nitrobacter hamburgensis X14 transposase, IS4 YP_576905.1 1828210 D 323097 CDS YP_576906.1 92117177 4033071 1829776..1830870 1 NC_007964.1 tISRso5; ISRSO5-transposase protein 1830870 4033071 Nham_1627 Nitrobacter hamburgensis X14 tISRso5; ISRSO5-transposase protein YP_576906.1 1829776 D 323097 CDS YP_576907.1 92117178 4033072 1830924..1832018 1 NC_007964.1 tISRso5; ISRSO5-transposase protein 1832018 4033072 Nham_1628 Nitrobacter hamburgensis X14 tISRso5; ISRSO5-transposase protein YP_576907.1 1830924 D 323097 CDS YP_576908.1 92117179 4033073 complement(1832001..1832735) 1 NC_007964.1 hypothetical protein 1832735 4033073 Nham_1629 Nitrobacter hamburgensis X14 hypothetical protein YP_576908.1 1832001 R 323097 CDS YP_576909.1 92117180 4033074 complement(1832805..1833674) 1 NC_007964.1 hypothetical protein 1833674 4033074 Nham_1630 Nitrobacter hamburgensis X14 hypothetical protein YP_576909.1 1832805 R 323097 CDS YP_576910.1 92117181 4033075 1833835..1834323 1 NC_007964.1 catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase 1834323 4033075 Nham_1631 Nitrobacter hamburgensis X14 cyanate hydratase YP_576910.1 1833835 D 323097 CDS YP_576911.1 92117182 4033076 complement(1834489..1834884) 1 NC_007964.1 hypothetical protein 1834884 4033076 Nham_1632 Nitrobacter hamburgensis X14 hypothetical protein YP_576911.1 1834489 R 323097 CDS YP_576912.2 162211271 4033077 1835148..1835915 1 NC_007964.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1835915 4033077 Nham_1633 Nitrobacter hamburgensis X14 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_576912.2 1835148 D 323097 CDS YP_576913.1 92117184 4033078 1836045..1836287 1 NC_007964.1 With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway; phosphoribosylformylglycinamidine synthase subunit PurS 1836287 4033078 Nham_1634 Nitrobacter hamburgensis X14 phosphoribosylformylglycinamidine synthase subunit PurS YP_576913.1 1836045 D 323097 CDS YP_576914.1 92117185 4033079 1836300..1837001 1 NC_007964.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 1837001 4033079 Nham_1635 Nitrobacter hamburgensis X14 phosphoribosylformylglycinamidine synthase I YP_576914.1 1836300 D 323097 CDS YP_576915.1 92117186 4033080 1837136..1839370 1 NC_007964.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 1839370 4033080 Nham_1636 Nitrobacter hamburgensis X14 phosphoribosylformylglycinamidine synthase II YP_576915.1 1837136 D 323097 CDS YP_576916.1 92117187 4033081 1839965..1840198 1 NC_007964.1 BolA-like protein 1840198 4033081 Nham_1637 Nitrobacter hamburgensis X14 BolA-like protein YP_576916.1 1839965 D 323097 CDS YP_576917.1 92117188 4033082 1840283..1841416 1 NC_007964.1 low temperature requirement A 1841416 4033082 Nham_1638 Nitrobacter hamburgensis X14 low temperature requirement A YP_576917.1 1840283 D 323097 CDS YP_576918.1 92117189 4033083 complement(1841605..1842570) 1 NC_007964.1 hypothetical protein 1842570 4033083 Nham_1639 Nitrobacter hamburgensis X14 hypothetical protein YP_576918.1 1841605 R 323097 CDS YP_576919.1 92117190 4033084 complement(1842617..1843873) 1 NC_007964.1 hypothetical protein 1843873 4033084 Nham_1640 Nitrobacter hamburgensis X14 hypothetical protein YP_576919.1 1842617 R 323097 CDS YP_576920.1 92117191 4033085 1844149..1844490 1 NC_007964.1 glutaredoxin-like protein 1844490 4033085 Nham_1641 Nitrobacter hamburgensis X14 glutaredoxin-like protein YP_576920.1 1844149 D 323097 CDS YP_576921.1 92117192 4033087 1845376..1845642 1 NC_007964.1 hypothetical protein 1845642 4033087 Nham_1643 Nitrobacter hamburgensis X14 hypothetical protein YP_576921.1 1845376 D 323097 CDS YP_576922.1 92117193 4032897 complement(1845709..1846326) 1 NC_007964.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1846326 rpsD 4032897 rpsD Nitrobacter hamburgensis X14 30S ribosomal protein S4 YP_576922.1 1845709 R 323097 CDS YP_576923.1 92117194 4032898 complement(1846642..1847439) 1 NC_007964.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 1847439 4032898 Nham_1645 Nitrobacter hamburgensis X14 glutamate racemase YP_576923.1 1846642 R 323097 CDS YP_576924.1 92117195 4032899 complement(1847548..1848105) 1 NC_007964.1 hypothetical protein 1848105 4032899 Nham_1646 Nitrobacter hamburgensis X14 hypothetical protein YP_576924.1 1847548 R 323097 CDS YP_576925.1 92117196 4032900 1848702..1849187 1 NC_007964.1 hypothetical protein 1849187 4032900 Nham_1647 Nitrobacter hamburgensis X14 hypothetical protein YP_576925.1 1848702 D 323097 CDS YP_576926.1 92117197 4032901 1849361..1850149 1 NC_007964.1 rhomboid-like protein 1850149 4032901 Nham_1648 Nitrobacter hamburgensis X14 rhomboid-like protein YP_576926.1 1849361 D 323097 CDS YP_576927.1 92117198 4032902 1850357..1850785 1 NC_007964.1 signal-transduction protein 1850785 4032902 Nham_1649 Nitrobacter hamburgensis X14 signal-transduction protein YP_576927.1 1850357 D 323097 CDS YP_576928.1 92117199 4032903 complement(1850798..1851841) 1 NC_007964.1 patatin 1851841 4032903 Nham_1650 Nitrobacter hamburgensis X14 patatin YP_576928.1 1850798 R 323097 CDS YP_576929.1 92117200 4032904 1852069..1853115 1 NC_007964.1 hypothetical protein 1853115 4032904 Nham_1651 Nitrobacter hamburgensis X14 hypothetical protein YP_576929.1 1852069 D 323097 CDS YP_576930.1 92117201 4032906 1853620..1854729 1 NC_007964.1 transposase, IS4 1854729 4032906 Nham_1653 Nitrobacter hamburgensis X14 transposase, IS4 YP_576930.1 1853620 D 323097 CDS YP_576931.1 92117202 4032907 complement(1854992..1855336) 1 NC_007964.1 hypothetical protein 1855336 4032907 Nham_1654 Nitrobacter hamburgensis X14 hypothetical protein YP_576931.1 1854992 R 323097 CDS YP_576932.1 92117203 4032908 1855650..1856573 1 NC_007964.1 hypothetical protein 1856573 4032908 Nham_1655 Nitrobacter hamburgensis X14 hypothetical protein YP_576932.1 1855650 D 323097 CDS YP_576933.1 92117204 4032909 complement(1856601..1857056) 1 NC_007964.1 nitrogen-fixing NifU-like 1857056 4032909 Nham_1656 Nitrobacter hamburgensis X14 nitrogen-fixing NifU-like YP_576933.1 1856601 R 323097 CDS YP_576934.1 92117205 4032910 1857307..1858011 1 NC_007964.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 1858011 folE 4032910 folE Nitrobacter hamburgensis X14 GTP cyclohydrolase I YP_576934.1 1857307 D 323097 CDS YP_576935.1 92117206 4032911 1858049..1858492 1 NC_007964.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 1858492 hisI 4032911 hisI Nitrobacter hamburgensis X14 phosphoribosyl-AMP cyclohydrolase YP_576935.1 1858049 D 323097 CDS YP_576936.1 92117207 4032912 1858665..1859639 1 NC_007964.1 hypothetical protein 1859639 4032912 Nham_1659 Nitrobacter hamburgensis X14 hypothetical protein YP_576936.1 1858665 D 323097 CDS YP_576937.1 92117208 4032913 1859867..1861327 1 NC_007964.1 hypothetical protein 1861327 4032913 Nham_1660 Nitrobacter hamburgensis X14 hypothetical protein YP_576937.1 1859867 D 323097 CDS YP_576938.1 92117209 4032914 complement(1861555..1862133) 1 NC_007964.1 CheA signal transduction histidine kinase 1862133 4032914 Nham_1661 Nitrobacter hamburgensis X14 CheA signal transduction histidine kinase YP_576938.1 1861555 R 323097 CDS YP_576939.1 92117210 4032915 complement(1862249..1862794) 1 NC_007964.1 response regulator receiver domain-containing protein 1862794 4032915 Nham_1662 Nitrobacter hamburgensis X14 response regulator receiver domain-containing protein YP_576939.1 1862249 R 323097 CDS YP_576940.1 92117211 4032916 complement(1862900..1863679) 1 NC_007964.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1863679 ppnK 4032916 ppnK Nitrobacter hamburgensis X14 inorganic polyphosphate/ATP-NAD kinase YP_576940.1 1862900 R 323097 CDS YP_576941.1 92117212 4032917 1864039..1864242 1 NC_007964.1 hypothetical protein 1864242 4032917 Nham_1664 Nitrobacter hamburgensis X14 hypothetical protein YP_576941.1 1864039 D 323097 CDS YP_576942.1 92117213 4032918 1864410..1864835 1 NC_007964.1 hypothetical protein 1864835 4032918 Nham_1665 Nitrobacter hamburgensis X14 hypothetical protein YP_576942.1 1864410 D 323097 CDS YP_576943.1 92117214 4032919 1865103..1865819 1 NC_007964.1 OmpA-like transmembrane region 1865819 4032919 Nham_1666 Nitrobacter hamburgensis X14 OmpA-like transmembrane region YP_576943.1 1865103 D 323097 CDS YP_576944.1 92117215 4032920 complement(1865927..1866112) 1 NC_007964.1 hypothetical protein 1866112 4032920 Nham_1667 Nitrobacter hamburgensis X14 hypothetical protein YP_576944.1 1865927 R 323097 CDS YP_576945.1 92117216 4032921 complement(1866321..1866884) 1 NC_007964.1 nitroreductase 1866884 4032921 Nham_1668 Nitrobacter hamburgensis X14 nitroreductase YP_576945.1 1866321 R 323097 CDS YP_576946.1 92117217 4032922 complement(1866967..1869012) 1 NC_007964.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 1869012 thrS 4032922 thrS Nitrobacter hamburgensis X14 threonyl-tRNA synthetase YP_576946.1 1866967 R 323097 CDS YP_576947.1 92117218 4032923 complement(1869168..1869632) 1 NC_007964.1 hypothetical protein 1869632 4032923 Nham_1670 Nitrobacter hamburgensis X14 hypothetical protein YP_576947.1 1869168 R 323097 CDS YP_576948.1 92117219 4032924 1869731..1870096 1 NC_007964.1 hypothetical protein 1870096 4032924 Nham_1671 Nitrobacter hamburgensis X14 hypothetical protein YP_576948.1 1869731 D 323097 CDS YP_576949.1 92117220 4032925 1870442..1871197 1 NC_007964.1 ABC transporter 1871197 4032925 Nham_1672 Nitrobacter hamburgensis X14 ABC transporter YP_576949.1 1870442 D 323097 CDS YP_576950.1 92117221 4032926 1871190..1871945 1 NC_007964.1 ABC transporter 1871945 4032926 Nham_1673 Nitrobacter hamburgensis X14 ABC transporter YP_576950.1 1871190 D 323097 CDS YP_576951.1 92117222 4032927 1872111..1873340 1 NC_007964.1 ABC transporter substrate-binding protein 1873340 4032927 Nham_1674 Nitrobacter hamburgensis X14 ABC transporter substrate-binding protein YP_576951.1 1872111 D 323097 CDS YP_576952.1 92117223 4032928 1873425..1874300 1 NC_007964.1 inner-membrane translocator 1874300 4032928 Nham_1675 Nitrobacter hamburgensis X14 inner-membrane translocator YP_576952.1 1873425 D 323097 CDS YP_576953.1 92117224 4032929 1874302..1875273 1 NC_007964.1 inner-membrane translocator 1875273 4032929 Nham_1676 Nitrobacter hamburgensis X14 inner-membrane translocator YP_576953.1 1874302 D 323097 CDS YP_576954.1 92117225 4032930 1875417..1876073 1 NC_007964.1 hypothetical protein 1876073 4032930 Nham_1677 Nitrobacter hamburgensis X14 hypothetical protein YP_576954.1 1875417 D 323097 CDS YP_576955.1 92117226 4032931 1876088..1877092 1 NC_007964.1 phosphate transporter 1877092 4032931 Nham_1678 Nitrobacter hamburgensis X14 phosphate transporter YP_576955.1 1876088 D 323097 CDS YP_576956.1 92117227 4032932 complement(1877085..1877399) 1 NC_007964.1 small multidrug resistance protein 1877399 4032932 Nham_1679 Nitrobacter hamburgensis X14 small multidrug resistance protein YP_576956.1 1877085 R 323097 CDS YP_576957.1 92117228 4032933 1877623..1879242 1 NC_007964.1 peptide chain release factor 3 1879242 4032933 Nham_1680 Nitrobacter hamburgensis X14 peptide chain release factor 3 YP_576957.1 1877623 D 323097 CDS YP_576958.1 92117229 4032934 complement(1879296..1879601) 1 NC_007964.1 hypothetical protein 1879601 4032934 Nham_1681 Nitrobacter hamburgensis X14 hypothetical protein YP_576958.1 1879296 R 323097 CDS YP_576959.1 92117230 4032935 1879772..1880356 1 NC_007964.1 protein NnrU 1880356 4032935 Nham_1682 Nitrobacter hamburgensis X14 protein NnrU YP_576959.1 1879772 D 323097 CDS YP_576960.1 92117231 4029387 1880358..1881185 1 NC_007964.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 1881185 panB 4029387 panB Nitrobacter hamburgensis X14 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_576960.1 1880358 D 323097 CDS YP_576961.1 92117232 4029388 1881339..1881992 1 NC_007964.1 hypothetical protein 1881992 4029388 Nham_1684 Nitrobacter hamburgensis X14 hypothetical protein YP_576961.1 1881339 D 323097 CDS YP_576962.1 92117233 4029389 1882033..1882572 1 NC_007964.1 hypothetical protein 1882572 4029389 Nham_1685 Nitrobacter hamburgensis X14 hypothetical protein YP_576962.1 1882033 D 323097 CDS YP_576963.1 92117234 4029390 1882642..1884024 1 NC_007964.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1884024 engA 4029390 engA Nitrobacter hamburgensis X14 GTP-binding protein EngA YP_576963.1 1882642 D 323097 CDS YP_576964.1 92117235 4029391 complement(1884382..1885125) 1 NC_007964.1 short-chain dehydrogenase/reductase SDR 1885125 4029391 Nham_1687 Nitrobacter hamburgensis X14 short-chain dehydrogenase/reductase SDR YP_576964.1 1884382 R 323097 CDS YP_576965.1 92117236 4029392 1885386..1886108 1 NC_007964.1 orotidine 5'-phosphate decarboxylase 1886108 4029392 Nham_1688 Nitrobacter hamburgensis X14 orotidine 5'-phosphate decarboxylase YP_576965.1 1885386 D 323097 CDS YP_576966.1 92117237 4029393 complement(1886170..1886769) 1 NC_007964.1 hypothetical protein 1886769 4029393 Nham_1689 Nitrobacter hamburgensis X14 hypothetical protein YP_576966.1 1886170 R 323097 CDS YP_576967.1 92117238 4029394 1886859..1887662 1 NC_007964.1 ISGsu2, transposase 1887662 4029394 Nham_1690 Nitrobacter hamburgensis X14 ISGsu2, transposase YP_576967.1 1886859 D 323097 CDS YP_576968.1 92117239 4029396 1888892..1889299 1 NC_007964.1 transposase, IS4 1889299 4029396 Nham_1692 Nitrobacter hamburgensis X14 transposase, IS4 YP_576968.1 1888892 D 323097 CDS YP_576969.1 92117240 4029397 1889847..1893353 1 NC_007964.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 1893353 dnaE 4029397 dnaE Nitrobacter hamburgensis X14 DNA polymerase III subunit alpha YP_576969.1 1889847 D 323097 CDS YP_576970.1 92117241 4029398 1893534..1894532 1 NC_007964.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1894532 rpsB 4029398 rpsB Nitrobacter hamburgensis X14 30S ribosomal protein S2 YP_576970.1 1893534 D 323097 CDS YP_576971.1 92117242 4029399 1894660..1895583 1 NC_007964.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1895583 tsf 4029399 tsf Nitrobacter hamburgensis X14 elongation factor Ts YP_576971.1 1894660 D 323097 CDS YP_576972.1 92117243 4029400 1895636..1896352 1 NC_007964.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1896352 pyrH 4029400 pyrH Nitrobacter hamburgensis X14 uridylate kinase YP_576972.1 1895636 D 323097 CDS YP_576973.1 92117244 4029401 1896393..1896977 1 NC_007964.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1896977 frr 4029401 frr Nitrobacter hamburgensis X14 ribosome recycling factor YP_576973.1 1896393 D 323097 CDS YP_576974.1 92117245 4029402 1896997..1897755 1 NC_007964.1 catalyzes the formation of UDP pyrophosphate from isopentenyl pyrophosphate; UDP pyrophosphate synthase 1897755 4029402 Nham_1698 Nitrobacter hamburgensis X14 UDP pyrophosphate synthase YP_576974.1 1896997 D 323097 CDS YP_576975.1 92117246 4029403 1897761..1898603 1 NC_007964.1 phosphatidate cytidylyltransferase 1898603 4029403 Nham_1699 Nitrobacter hamburgensis X14 phosphatidate cytidylyltransferase YP_576975.1 1897761 D 323097 CDS YP_576976.1 92117247 4029404 1898607..1899830 1 NC_007964.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1899830 4029404 Nham_1700 Nitrobacter hamburgensis X14 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_576976.1 1898607 D 323097 CDS YP_576977.1 92117248 4029405 1899877..1901028 1 NC_007964.1 peptidase M50, membrane-associated zinc metallopeptidase 1901028 4029405 Nham_1701 Nitrobacter hamburgensis X14 peptidase M50, membrane-associated zinc metallopeptidase YP_576977.1 1899877 D 323097 CDS YP_576978.1 92117249 4029406 1901343..1903874 1 NC_007964.1 surface antigen (D15) 1903874 4029406 Nham_1702 Nitrobacter hamburgensis X14 surface antigen (D15) YP_576978.1 1901343 D 323097 CDS YP_576979.1 92117250 4030303 1903907..1904992 1 NC_007964.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1904992 lpxD 4030303 lpxD Nitrobacter hamburgensis X14 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_576979.1 1903907 D 323097 CDS YP_576980.1 92117251 4030304 1904996..1905451 1 NC_007964.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1905451 fabZ 4030304 fabZ Nitrobacter hamburgensis X14 (3R)-hydroxymyristoyl-ACP dehydratase YP_576980.1 1904996 D 323097 CDS YP_576981.1 92117252 4030305 1905451..1906257 1 NC_007964.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 1906257 4030305 Nham_1705 Nitrobacter hamburgensis X14 UDP-N-acetylglucosamine acyltransferase YP_576981.1 1905451 D 323097 CDS YP_576982.1 92117253 4030306 1906277..1907134 1 NC_007964.1 hypothetical protein 1907134 4030306 Nham_1706 Nitrobacter hamburgensis X14 hypothetical protein YP_576982.1 1906277 D 323097 CDS YP_576983.1 92117254 4030307 1907134..1908324 1 NC_007964.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 1908324 lpxB 4030307 lpxB Nitrobacter hamburgensis X14 lipid-A-disaccharide synthase YP_576983.1 1907134 D 323097 CDS YP_576984.1 92117255 4030308 complement(1908386..1909687) 1 NC_007964.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 1909687 gltA 4030308 gltA Nitrobacter hamburgensis X14 type II citrate synthase YP_576984.1 1908386 R 323097 CDS YP_576985.1 92117256 4030309 complement(1909832..1911307) 1 NC_007964.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 1911307 gltX 4030309 gltX Nitrobacter hamburgensis X14 glutamyl-tRNA synthetase YP_576985.1 1909832 R 323097 CDS YP_576986.1 92117257 4030310 1911461..1913137 1 NC_007964.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 1913137 4030310 Nham_1710 Nitrobacter hamburgensis X14 glutaminyl-tRNA synthetase YP_576986.1 1911461 D 323097 CDS YP_576987.1 92117258 4030311 1913225..1914466 1 NC_007964.1 ComEC/Rec2-like protein 1914466 4030311 Nham_1711 Nitrobacter hamburgensis X14 ComEC/Rec2-like protein YP_576987.1 1913225 D 323097 CDS YP_576988.1 92117259 4030312 1914645..1915949 1 NC_007964.1 hypothetical protein 1915949 4030312 Nham_1712 Nitrobacter hamburgensis X14 hypothetical protein YP_576988.1 1914645 D 323097 CDS YP_576989.1 92117260 4030313 1916828..1917715 1 NC_007964.1 hypothetical protein 1917715 4030313 Nham_1713 Nitrobacter hamburgensis X14 hypothetical protein YP_576989.1 1916828 D 323097 CDS YP_576990.1 92117261 4030314 1917972..1918844 1 NC_007964.1 hypothetical protein 1918844 4030314 Nham_1714 Nitrobacter hamburgensis X14 hypothetical protein YP_576990.1 1917972 D 323097 CDS YP_576991.1 92117262 4030315 1918855..1919265 1 NC_007964.1 hypothetical protein 1919265 4030315 Nham_1715 Nitrobacter hamburgensis X14 hypothetical protein YP_576991.1 1918855 D 323097 CDS YP_576992.1 92117263 4030316 1919265..1919711 1 NC_007964.1 hypothetical protein 1919711 4030316 Nham_1716 Nitrobacter hamburgensis X14 hypothetical protein YP_576992.1 1919265 D 323097 CDS YP_576993.1 92117264 4030317 1919711..1920931 1 NC_007964.1 Phage portal protein, HK97 1920931 4030317 Nham_1717 Nitrobacter hamburgensis X14 Phage portal protein, HK97 YP_576993.1 1919711 D 323097 CDS YP_576994.1 92117265 4030318 1920928..1921458 1 NC_007964.1 peptidase U35, phage prohead HK97 1921458 4030318 Nham_1718 Nitrobacter hamburgensis X14 peptidase U35, phage prohead HK97 YP_576994.1 1920928 D 323097 CDS YP_576995.1 92117266 4030319 1921475..1922629 1 NC_007964.1 phage major capsid protein, HK97 1922629 4030319 Nham_1719 Nitrobacter hamburgensis X14 phage major capsid protein, HK97 YP_576995.1 1921475 D 323097 CDS YP_576996.1 92117267 4030320 1922688..1923074 1 NC_007964.1 hypothetical protein 1923074 4030320 Nham_1720 Nitrobacter hamburgensis X14 hypothetical protein YP_576996.1 1922688 D 323097 CDS YP_576997.1 92117268 4030321 1923173..1923319 1 NC_007964.1 hypothetical protein 1923319 4030321 Nham_1721 Nitrobacter hamburgensis X14 hypothetical protein YP_576997.1 1923173 D 323097 CDS YP_576998.1 92117269 4030341 1923319..1923669 1 NC_007964.1 HNH nuclease / phage phi-105 holin-like protein 1923669 4030341 Nham_1722 Nitrobacter hamburgensis X14 HNH nuclease / phage phi-105 holin-like protein YP_576998.1 1923319 D 323097 CDS YP_576999.1 92117270 4030342 1923943..1924245 1 NC_007964.1 phage protein 1924245 4030342 Nham_1723 Nitrobacter hamburgensis X14 phage protein YP_576999.1 1923943 D 323097 CDS YP_577000.1 92117271 4030343 1924242..1924658 1 NC_007964.1 phage terminase, small subunit , P27 1924658 4030343 Nham_1724 Nitrobacter hamburgensis X14 phage terminase, small subunit , P27 YP_577000.1 1924242 D 323097 CDS YP_577001.1 92117272 4030344 1924655..1924993 1 NC_007964.1 hypothetical protein 1924993 4030344 Nham_1725 Nitrobacter hamburgensis X14 hypothetical protein YP_577001.1 1924655 D 323097 CDS YP_577002.1 92117273 4030345 1924990..1926612 1 NC_007964.1 phage terminase 1926612 4030345 Nham_1726 Nitrobacter hamburgensis X14 phage terminase YP_577002.1 1924990 D 323097 CDS YP_577003.1 92117274 4030346 1927555..1928358 1 NC_007964.1 phage integrase 1928358 4030346 Nham_1727 Nitrobacter hamburgensis X14 phage integrase YP_577003.1 1927555 D 323097 CDS YP_577004.1 92117275 4030348 complement(1929597..1930298) 1 NC_007964.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 1930298 4030348 Nham_1729 Nitrobacter hamburgensis X14 LexA repressor YP_577004.1 1929597 R 323097 CDS YP_577005.1 92117276 4030349 complement(1930462..1931676) 1 NC_007964.1 MoeA-like domain-containing protein 1931676 4030349 Nham_1730 Nitrobacter hamburgensis X14 MoeA-like domain-containing protein YP_577005.1 1930462 R 323097 CDS YP_577006.1 92117277 4030350 1932303..1932695 1 NC_007964.1 hypothetical protein 1932695 4030350 Nham_1731 Nitrobacter hamburgensis X14 hypothetical protein YP_577006.1 1932303 D 323097 CDS YP_577007.1 92117278 4030351 complement(1932684..1933199) 1 NC_007964.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 1933199 moaC 4030351 moaC Nitrobacter hamburgensis X14 molybdenum cofactor biosynthesis protein MoaC YP_577007.1 1932684 R 323097 CDS YP_577008.1 92117279 4030352 complement(1933357..1934202) 1 NC_007964.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol-phosphate synthase 1934202 trpC 4030352 trpC Nitrobacter hamburgensis X14 indole-3-glycerol-phosphate synthase YP_577008.1 1933357 R 323097 CDS YP_577009.1 92117280 4030353 complement(1934213..1935226) 1 NC_007964.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 1935226 trpD 4030353 trpD Nitrobacter hamburgensis X14 anthranilate phosphoribosyltransferase YP_577009.1 1934213 R 323097 CDS YP_577010.1 92117281 4030354 complement(1935267..1937174) 1 NC_007964.1 PpiC-type peptidyl-prolyl cis-trans isomerase 1937174 4030354 Nham_1735 Nitrobacter hamburgensis X14 PpiC-type peptidyl-prolyl cis-trans isomerase YP_577010.1 1935267 R 323097 CDS YP_577011.1 92117282 4030355 1937414..1938166 1 NC_007964.1 triosephosphate isomerase 1938166 4030355 Nham_1736 Nitrobacter hamburgensis X14 triosephosphate isomerase YP_577011.1 1937414 D 323097 CDS YP_577012.1 92117283 4030356 1938470..1938862 1 NC_007964.1 preprotein translocase subunit SecG 1938862 secG 4030356 secG Nitrobacter hamburgensis X14 preprotein translocase subunit SecG YP_577012.1 1938470 D 323097 CDS YP_577013.1 92117284 4030357 1939021..1940658 1 NC_007964.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1940658 pyrG 4030357 pyrG Nitrobacter hamburgensis X14 CTP synthetase YP_577013.1 1939021 D 323097 CDS YP_577014.1 92117285 4030358 1940812..1941675 1 NC_007964.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 1941675 4030358 Nham_1739 Nitrobacter hamburgensis X14 2-dehydro-3-deoxyphosphooctonate aldolase YP_577014.1 1940812 D 323097 CDS YP_577015.1 92117286 4030359 1941672..1942883 1 NC_007964.1 major facilitator transporter 1942883 4030359 Nham_1740 Nitrobacter hamburgensis X14 major facilitator transporter YP_577015.1 1941672 D 323097 CDS YP_577016.1 92117287 4030360 1942969..1943685 1 NC_007964.1 hypothetical protein 1943685 4030360 Nham_1741 Nitrobacter hamburgensis X14 hypothetical protein YP_577016.1 1942969 D 323097 CDS YP_577017.1 92117288 4032784 complement(1943703..1944179) 1 NC_007964.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 1944179 4032784 Nham_1742 Nitrobacter hamburgensis X14 7-cyano-7-deazaguanine reductase YP_577017.1 1943703 R 323097 CDS YP_577018.1 92117289 4032785 1944365..1945648 1 NC_007964.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 1945648 eno 4032785 eno Nitrobacter hamburgensis X14 phosphopyruvate hydratase YP_577018.1 1944365 D 323097 CDS YP_577019.1 92117290 4032786 complement(1945741..1946415) 1 NC_007964.1 hypothetical protein 1946415 4032786 Nham_1744 Nitrobacter hamburgensis X14 hypothetical protein YP_577019.1 1945741 R 323097 CDS YP_577020.1 92117291 4032787 1946679..1947929 1 NC_007964.1 hypothetical protein 1947929 4032787 Nham_1745 Nitrobacter hamburgensis X14 hypothetical protein YP_577020.1 1946679 D 323097 CDS YP_577021.1 92117292 4032788 1947937..1948521 1 NC_007964.1 isoprenylcysteine carboxyl methyltransferase 1948521 4032788 Nham_1746 Nitrobacter hamburgensis X14 isoprenylcysteine carboxyl methyltransferase YP_577021.1 1947937 D 323097 CDS YP_577022.1 92117293 4032789 1948668..1949225 1 NC_007964.1 NADPH-dependent FMN reductase 1949225 4032789 Nham_1747 Nitrobacter hamburgensis X14 NADPH-dependent FMN reductase YP_577022.1 1948668 D 323097 CDS YP_577023.1 92117294 4032790 1949286..1949603 1 NC_007964.1 septum formation initiator 1949603 4032790 Nham_1748 Nitrobacter hamburgensis X14 septum formation initiator YP_577023.1 1949286 D 323097 CDS YP_577024.1 92117295 4032791 1949824..1950846 1 NC_007964.1 pyruvate dehydrogenase (lipoamide) 1950846 4032791 Nham_1749 Nitrobacter hamburgensis X14 pyruvate dehydrogenase (lipoamide) YP_577024.1 1949824 D 323097 CDS YP_577025.1 92117296 4032792 1950874..1952298 1 NC_007964.1 catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase; pyruvate dehydrogenase subunit beta 1952298 4032792 Nham_1750 Nitrobacter hamburgensis X14 pyruvate dehydrogenase subunit beta YP_577025.1 1950874 D 323097 CDS YP_577026.1 92117297 4032793 1952312..1953676 1 NC_007964.1 branched-chain alpha-keto acid dehydrogenase subunit E2 1953676 4032793 Nham_1751 Nitrobacter hamburgensis X14 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_577026.1 1952312 D 323097 CDS YP_577027.1 92117298 4032794 1953895..1955328 1 NC_007964.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1955328 4032794 Nham_1752 Nitrobacter hamburgensis X14 dihydrolipoamide dehydrogenase YP_577027.1 1953895 D 323097 CDS YP_577028.1 92117299 4032796 1955957..1956778 1 NC_007964.1 Sel1-like 1956778 4032796 Nham_1754 Nitrobacter hamburgensis X14 Sel1-like YP_577028.1 1955957 D 323097 CDS YP_577029.1 92117300 4032797 complement(1956897..1957697) 1 NC_007964.1 exodeoxyribonuclease III (xth) 1957697 4032797 Nham_1755 Nitrobacter hamburgensis X14 exodeoxyribonuclease III (xth) YP_577029.1 1956897 R 323097 CDS YP_577030.1 92117301 4032798 complement(1957812..1958144) 1 NC_007964.1 HesB/YadR/YfhF 1958144 4032798 Nham_1756 Nitrobacter hamburgensis X14 HesB/YadR/YfhF YP_577030.1 1957812 R 323097 CDS YP_577031.1 92117302 4032799 1958256..1959470 1 NC_007964.1 deoxyguanosinetriphosphate triphosphohydrolase 1959470 4032799 Nham_1757 Nitrobacter hamburgensis X14 deoxyguanosinetriphosphate triphosphohydrolase YP_577031.1 1958256 D 323097 CDS YP_577032.1 92117303 4032800 1959509..1961302 1 NC_007964.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1961302 argS 4032800 argS Nitrobacter hamburgensis X14 arginyl-tRNA synthetase YP_577032.1 1959509 D 323097 CDS YP_577033.1 92117304 4032801 1961403..1962848 1 NC_007964.1 sporulation related protein 1962848 4032801 Nham_1759 Nitrobacter hamburgensis X14 sporulation related protein YP_577033.1 1961403 D 323097 CDS YP_577034.1 92117305 4032802 1962896..1963921 1 NC_007964.1 beta-N-acetylhexosaminidase 1963921 4032802 Nham_1760 Nitrobacter hamburgensis X14 beta-N-acetylhexosaminidase YP_577034.1 1962896 D 323097 CDS YP_577035.1 92117306 4032936 1963918..1964757 1 NC_007964.1 chromosome segregation and condensation protein ScpA 1964757 4032936 Nham_1761 Nitrobacter hamburgensis X14 chromosome segregation and condensation protein ScpA YP_577035.1 1963918 D 323097 CDS YP_577036.1 92117307 4032937 1964779..1965525 1 NC_007964.1 transcriptional regulator 1965525 4032937 Nham_1762 Nitrobacter hamburgensis X14 transcriptional regulator YP_577036.1 1964779 D 323097 CDS YP_577037.1 92117308 4032938 complement(1965589..1966212) 1 NC_007964.1 multiple antibiotic resistance (MarC)-like proteins 1966212 4032938 Nham_1763 Nitrobacter hamburgensis X14 multiple antibiotic resistance (MarC)-like proteins YP_577037.1 1965589 R 323097 CDS YP_577038.1 92117309 4032939 1966362..1969103 1 NC_007964.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 1969103 4032939 Nham_1764 Nitrobacter hamburgensis X14 DNA gyrase subunit A YP_577038.1 1966362 D 323097 CDS YP_577039.1 92117310 4032940 complement(1969317..1969571) 1 NC_007964.1 hypothetical protein 1969571 4032940 Nham_1765 Nitrobacter hamburgensis X14 hypothetical protein YP_577039.1 1969317 R 323097 CDS YP_577040.1 92117311 4032941 1969899..1970396 1 NC_007964.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 1970396 coaD 4032941 coaD Nitrobacter hamburgensis X14 phosphopantetheine adenylyltransferase YP_577040.1 1969899 D 323097 CDS YP_577041.1 92117312 4032942 1970429..1970989 1 NC_007964.1 peptidyl-prolyl cis-trans isomerase, cyclophilin type 1970989 4032942 Nham_1767 Nitrobacter hamburgensis X14 peptidyl-prolyl cis-trans isomerase, cyclophilin type YP_577041.1 1970429 D 323097 CDS YP_577042.1 92117313 4032943 1970999..1971427 1 NC_007964.1 hypothetical protein 1971427 4032943 Nham_1768 Nitrobacter hamburgensis X14 hypothetical protein YP_577042.1 1970999 D 323097 CDS YP_577043.1 92117314 4032944 1971424..1971867 1 NC_007964.1 cyclophilin type peptidyl-prolyl cis-trans isomerase 1971867 4032944 Nham_1769 Nitrobacter hamburgensis X14 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_577043.1 1971424 D 323097 CDS YP_577044.1 92117315 4032945 1971963..1973060 1 NC_007964.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1973060 queA 4032945 queA Nitrobacter hamburgensis X14 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_577044.1 1971963 D 323097 CDS YP_577045.1 92117316 4032946 1973057..1974190 1 NC_007964.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1974190 tgt 4032946 tgt Nitrobacter hamburgensis X14 queuine tRNA-ribosyltransferase YP_577045.1 1973057 D 323097 CDS YP_577046.1 92117317 4032947 complement(1974218..1974436) 1 NC_007964.1 hypothetical protein 1974436 4032947 Nham_1772 Nitrobacter hamburgensis X14 hypothetical protein YP_577046.1 1974218 R 323097 CDS YP_577047.1 92117318 4032948 1974659..1975636 1 NC_007964.1 cysteine synthase 1975636 4032948 Nham_1773 Nitrobacter hamburgensis X14 cysteine synthase YP_577047.1 1974659 D 323097 CDS YP_577048.1 92117319 4032949 1975675..1975914 1 NC_007964.1 hypothetical protein 1975914 4032949 Nham_1774 Nitrobacter hamburgensis X14 hypothetical protein YP_577048.1 1975675 D 323097 CDS YP_577049.1 92117320 4032950 complement(1975947..1976426) 1 NC_007964.1 hypothetical protein 1976426 4032950 Nham_1775 Nitrobacter hamburgensis X14 hypothetical protein YP_577049.1 1975947 R 323097 CDS YP_577050.1 92117321 4032951 complement(1976464..1976814) 1 NC_007964.1 hypothetical protein 1976814 4032951 Nham_1776 Nitrobacter hamburgensis X14 hypothetical protein YP_577050.1 1976464 R 323097 CDS YP_577051.1 92117322 4032952 complement(1977025..1977414) 1 NC_007964.1 hypothetical protein 1977414 4032952 Nham_1777 Nitrobacter hamburgensis X14 hypothetical protein YP_577051.1 1977025 R 323097 CDS YP_577052.1 92117323 4032953 1977868..1978167 1 NC_007964.1 hypothetical protein 1978167 4032953 Nham_1778 Nitrobacter hamburgensis X14 hypothetical protein YP_577052.1 1977868 D 323097 CDS YP_577053.1 92117324 4032955 complement(1978837..1981506) 1 NC_007964.1 glycosyl transferase family protein 1981506 4032955 Nham_1779 Nitrobacter hamburgensis X14 glycosyl transferase family protein YP_577053.1 1978837 R 323097 CDS YP_577054.1 92117325 4032956 complement(1981694..1982269) 1 NC_007964.1 hypothetical protein 1982269 4032956 Nham_1780 Nitrobacter hamburgensis X14 hypothetical protein YP_577054.1 1981694 R 323097 CDS YP_577055.1 92117326 4032957 1982700..1984184 1 NC_007964.1 beta (1-6) glucans synthase 1984184 4032957 Nham_1781 Nitrobacter hamburgensis X14 beta (1-6) glucans synthase YP_577055.1 1982700 D 323097 CDS YP_577056.1 92117327 4032958 complement(1984147..1984527) 1 NC_007964.1 hypothetical protein 1984527 4032958 Nham_1782 Nitrobacter hamburgensis X14 hypothetical protein YP_577056.1 1984147 R 323097 CDS YP_577057.1 92117328 4032959 complement(1984594..1985988) 1 NC_007964.1 hypothetical protein 1985988 4032959 Nham_1783 Nitrobacter hamburgensis X14 hypothetical protein YP_577057.1 1984594 R 323097 CDS YP_577058.1 92117329 4032960 1986116..1987474 1 NC_007964.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 1987474 glmU 4032960 glmU Nitrobacter hamburgensis X14 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_577058.1 1986116 D 323097 CDS YP_577059.1 92117330 4032961 complement(1987508..1987738) 1 NC_007964.1 hypothetical protein 1987738 4032961 Nham_1785 Nitrobacter hamburgensis X14 hypothetical protein YP_577059.1 1987508 R 323097 CDS YP_577060.1 92117331 4032962 complement(1988219..1988458) 1 NC_007964.1 hypothetical protein 1988458 4032962 Nham_1786 Nitrobacter hamburgensis X14 hypothetical protein YP_577060.1 1988219 R 323097 CDS YP_577061.1 92117332 4032964 1989034..1989699 1 NC_007964.1 protein-L-isoaspartate(D-aspartate) O-methyltransferase 1989699 4032964 Nham_1787 Nitrobacter hamburgensis X14 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_577061.1 1989034 D 323097 CDS YP_577062.1 92117333 4032965 1989876..1990115 1 NC_007964.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin arginine translocase protein A 1990115 tatA 4032965 tatA Nitrobacter hamburgensis X14 twin arginine translocase protein A YP_577062.1 1989876 D 323097 CDS YP_577063.1 92117334 4032966 1990298..1990834 1 NC_007964.1 twin-arginine translocation protein TatB 1990834 4032966 Nham_1789 Nitrobacter hamburgensis X14 twin-arginine translocation protein TatB YP_577063.1 1990298 D 323097 CDS YP_577064.1 92117335 4032967 1990831..1991679 1 NC_007964.1 Sec-independent protein translocase TatC 1991679 4032967 Nham_1790 Nitrobacter hamburgensis X14 Sec-independent protein translocase TatC YP_577064.1 1990831 D 323097 CDS YP_577065.1 92117336 4032968 1991865..1993277 1 NC_007964.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 1993277 4032968 Nham_1791 Nitrobacter hamburgensis X14 seryl-tRNA synthetase YP_577065.1 1991865 D 323097 CDS YP_577066.1 92117337 4032969 1993394..1994161 1 NC_007964.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 1994161 surE 4032969 surE Nitrobacter hamburgensis X14 stationary phase survival protein SurE YP_577066.1 1993394 D 323097 CDS YP_577067.1 92117338 4032970 complement(1994253..1994633) 1 NC_007964.1 response regulator receiver domain-containing protein 1994633 4032970 Nham_1793 Nitrobacter hamburgensis X14 response regulator receiver domain-containing protein YP_577067.1 1994253 R 323097 CDS YP_577068.1 92117339 4032971 1994916..1995569 1 NC_007964.1 protein-L-isoaspartate O-methyltransferase 1995569 4032971 Nham_1794 Nitrobacter hamburgensis X14 protein-L-isoaspartate O-methyltransferase YP_577068.1 1994916 D 323097 CDS YP_577069.1 92117340 4032972 1995726..1997075 1 NC_007964.1 peptidase M23B 1997075 4032972 Nham_1795 Nitrobacter hamburgensis X14 peptidase M23B YP_577069.1 1995726 D 323097 CDS YP_577070.1 92117341 4032973 1997327..1998517 1 NC_007964.1 chromate transporter 1998517 4032973 Nham_1796 Nitrobacter hamburgensis X14 chromate transporter YP_577070.1 1997327 D 323097 CDS YP_577071.1 92117342 4032974 complement(1998574..1999536) 1 NC_007964.1 hypothetical protein 1999536 4032974 Nham_1797 Nitrobacter hamburgensis X14 hypothetical protein YP_577071.1 1998574 R 323097 CDS YP_577072.1 92117343 4032975 1999728..2000129 1 NC_007964.1 preprotein translocase subunit YajC 2000129 4032975 Nham_1798 Nitrobacter hamburgensis X14 preprotein translocase subunit YajC YP_577072.1 1999728 D 323097 CDS YP_577073.1 92117344 4032976 2000175..2001776 1 NC_007964.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 2001776 secD 4032976 secD Nitrobacter hamburgensis X14 preprotein translocase subunit SecD YP_577073.1 2000175 D 323097 CDS YP_577074.1 92117345 4032977 2001793..2002815 1 NC_007964.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 2002815 secF 4032977 secF Nitrobacter hamburgensis X14 preprotein translocase subunit SecF YP_577074.1 2001793 D 323097 CDS YP_577075.1 92117346 4032978 2002812..2003198 1 NC_007964.1 hypothetical protein 2003198 4032978 Nham_1801 Nitrobacter hamburgensis X14 hypothetical protein YP_577075.1 2002812 D 323097 CDS YP_577076.1 92117347 4032979 2003295..2004158 1 NC_007964.1 squalene/phytoene synthase 2004158 4032979 Nham_1802 Nitrobacter hamburgensis X14 squalene/phytoene synthase YP_577076.1 2003295 D 323097 CDS YP_577077.1 92117348 4032980 complement(2004165..2005265) 1 NC_007964.1 serine/threonine protein kinase 2005265 4032980 Nham_1803 Nitrobacter hamburgensis X14 serine/threonine protein kinase YP_577077.1 2004165 R 323097 CDS YP_577078.1 92117349 4032981 complement(2005293..2006726) 1 NC_007964.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 2006726 4032981 Nham_1804 Nitrobacter hamburgensis X14 tRNA (uracil-5-)-methyltransferase Gid YP_577078.1 2005293 R 323097 CDS YP_577079.1 92117350 4032982 complement(2007014..2007937) 1 NC_007964.1 hypothetical protein 2007937 4032982 Nham_1805 Nitrobacter hamburgensis X14 hypothetical protein YP_577079.1 2007014 R 323097 CDS YP_577080.1 92117351 4032983 2008335..2008709 1 NC_007964.1 hypothetical protein 2008709 4032983 Nham_1806 Nitrobacter hamburgensis X14 hypothetical protein YP_577080.1 2008335 D 323097 CDS YP_577081.1 92117352 4032984 complement(2008811..2009143) 1 NC_007964.1 acetyltransferase 2009143 4032984 Nham_1807 Nitrobacter hamburgensis X14 acetyltransferase YP_577081.1 2008811 R 323097 CDS YP_577082.1 92117353 4032985 complement(2009177..2009458) 1 NC_007964.1 acetyltransferase 2009458 4032985 Nham_1808 Nitrobacter hamburgensis X14 acetyltransferase YP_577082.1 2009177 R 323097 CDS YP_577083.1 92117354 4032986 2009761..2010198 1 NC_007964.1 Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis; NADH dehydrogenase 2010198 4032986 Nham_1809 Nitrobacter hamburgensis X14 NADH dehydrogenase YP_577083.1 2009761 D 323097 CDS YP_577084.1 92117355 4032987 complement(2010434..2012104) 1 NC_007964.1 hypothetical protein 2012104 4032987 Nham_1810 Nitrobacter hamburgensis X14 hypothetical protein YP_577084.1 2010434 R 323097 CDS YP_577085.1 92117356 4032988 2012493..2013413 1 NC_007964.1 hypothetical protein 2013413 4032988 Nham_1811 Nitrobacter hamburgensis X14 hypothetical protein YP_577085.1 2012493 D 323097 CDS YP_577086.1 92117357 4032989 complement(2013585..2014589) 1 NC_007964.1 hypothetical protein 2014589 4032989 Nham_1812 Nitrobacter hamburgensis X14 hypothetical protein YP_577086.1 2013585 R 323097 CDS YP_577087.1 92117358 4032990 2014846..2015079 1 NC_007964.1 hypothetical protein 2015079 4032990 Nham_1813 Nitrobacter hamburgensis X14 hypothetical protein YP_577087.1 2014846 D 323097 CDS YP_577088.1 92117359 4032991 2015606..2016910 1 NC_007964.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 2016910 glyA 4032991 glyA Nitrobacter hamburgensis X14 serine hydroxymethyltransferase YP_577088.1 2015606 D 323097 CDS YP_577089.1 92117360 4032992 2017078..2017560 1 NC_007964.1 transcriptional regulator NrdR 2017560 nrdR 4032992 nrdR Nitrobacter hamburgensis X14 transcriptional regulator NrdR YP_577089.1 2017078 D 323097 CDS YP_577090.1 92117361 4032993 2017557..2018708 1 NC_007964.1 riboflavin biosynthesis protein RibD 2018708 4032993 Nham_1816 Nitrobacter hamburgensis X14 riboflavin biosynthesis protein RibD YP_577090.1 2017557 D 323097 CDS YP_577091.1 92117362 4032994 2018795..2019403 1 NC_007964.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2019403 4032994 Nham_1817 Nitrobacter hamburgensis X14 riboflavin synthase subunit alpha YP_577091.1 2018795 D 323097 CDS YP_577092.1 92117363 4032995 2019506..2019997 1 NC_007964.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 2019997 ribH 4032995 ribH Nitrobacter hamburgensis X14 6,7-dimethyl-8-ribityllumazine synthase YP_577092.1 2019506 D 323097 CDS YP_577093.1 92117364 4032996 2020005..2020487 1 NC_007964.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 2020487 nusB 4032996 nusB Nitrobacter hamburgensis X14 transcription antitermination protein NusB YP_577093.1 2020005 D 323097 CDS YP_577094.1 92117365 4032997 2020534..2021505 1 NC_007964.1 thiamine-monophosphate kinase 2021505 4032997 Nham_1820 Nitrobacter hamburgensis X14 thiamine-monophosphate kinase YP_577094.1 2020534 D 323097 CDS YP_577095.1 92117366 4032998 2021588..2022697 1 NC_007964.1 transposase, IS4 2022697 4032998 Nham_1821 Nitrobacter hamburgensis X14 transposase, IS4 YP_577095.1 2021588 D 323097 CDS YP_577096.1 92117367 4032999 complement(2022991..2026110) 1 NC_007964.1 ribonuclease 2026110 4032999 Nham_1822 Nitrobacter hamburgensis X14 ribonuclease YP_577096.1 2022991 R 323097 CDS YP_577097.1 92117368 4033000 2026820..2028088 1 NC_007964.1 N-acetylmuramoyl-L-alanine amidase 2028088 4033000 Nham_1823 Nitrobacter hamburgensis X14 N-acetylmuramoyl-L-alanine amidase YP_577097.1 2026820 D 323097 CDS YP_577098.1 92117369 4033001 2028255..2030786 1 NC_007964.1 penicillin-binding protein 1A 2030786 4033001 Nham_1824 Nitrobacter hamburgensis X14 penicillin-binding protein 1A YP_577098.1 2028255 D 323097 CDS YP_577099.1 92117370 4033002 2031132..2032100 1 NC_007964.1 peptide chain release factor 2 2032100 4033002 Nham_1825 Nitrobacter hamburgensis X14 peptide chain release factor 2 YP_577099.1 2031132 D 323097 CDS YP_577100.1 92117371 4033003 2032463..2033926 1 NC_007964.1 Type I secretion outer membrane protein, TolC 2033926 4033003 Nham_1826 Nitrobacter hamburgensis X14 Type I secretion outer membrane protein, TolC YP_577100.1 2032463 D 323097 CDS YP_577101.1 92117372 4033004 2034213..2034917 1 NC_007964.1 hypothetical protein 2034917 4033004 Nham_1827 Nitrobacter hamburgensis X14 hypothetical protein YP_577101.1 2034213 D 323097 CDS YP_577102.1 92117373 4033005 2035123..2037987 1 NC_007964.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 2037987 valS 4033005 valS Nitrobacter hamburgensis X14 valyl-tRNA synthetase YP_577102.1 2035123 D 323097 CDS YP_577103.1 92117374 4033006 2037984..2039150 1 NC_007964.1 major facilitator transporter 2039150 4033006 Nham_1829 Nitrobacter hamburgensis X14 major facilitator transporter YP_577103.1 2037984 D 323097 CDS YP_577104.1 92117375 4033007 complement(2039131..2039751) 1 NC_007964.1 responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 2039751 4033007 Nham_1830 Nitrobacter hamburgensis X14 3-methyladenine DNA glycosylase YP_577104.1 2039131 R 323097 CDS YP_577105.1 92117376 4033008 2039878..2040837 1 NC_007964.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 2040837 4033008 Nham_1831 Nitrobacter hamburgensis X14 lipoyl synthase YP_577105.1 2039878 D 323097 CDS YP_577106.1 92117377 4033009 2040849..2041316 1 NC_007964.1 cyclase/dehydrase 2041316 4033009 Nham_1832 Nitrobacter hamburgensis X14 cyclase/dehydrase YP_577106.1 2040849 D 323097 CDS YP_577107.1 92117378 4033010 complement(2041328..2041954) 1 NC_007964.1 CinA-like protein 2041954 4033010 Nham_1833 Nitrobacter hamburgensis X14 CinA-like protein YP_577107.1 2041328 R 323097 CDS YP_577108.1 92117379 4033011 complement(2041956..2043215) 1 NC_007964.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2043215 4033011 Nham_1834 Nitrobacter hamburgensis X14 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_577108.1 2041956 R 323097 CDS YP_577109.1 92117380 4033012 2043383..2044432 1 NC_007964.1 dihydrouridine synthase TIM-barrel protein nifR3 2044432 4033012 Nham_1835 Nitrobacter hamburgensis X14 dihydrouridine synthase TIM-barrel protein nifR3 YP_577109.1 2043383 D 323097 CDS YP_577110.1 92117381 4033013 2044429..2045604 1 NC_007964.1 signal transduction histidine kinase, nitrogen specific, NtrB 2045604 4033013 Nham_1836 Nitrobacter hamburgensis X14 signal transduction histidine kinase, nitrogen specific, NtrB YP_577110.1 2044429 D 323097 CDS YP_577111.1 92117382 4033014 2045614..2047056 1 NC_007964.1 nitrogen metabolism transcriptional regulator, NtrC, Fis family 2047056 4033014 Nham_1837 Nitrobacter hamburgensis X14 nitrogen metabolism transcriptional regulator, NtrC, Fis family YP_577111.1 2045614 D 323097 CDS YP_577112.1 92117383 4033015 2047249..2049543 1 NC_007964.1 multi-sensor signal transduction histidine kinase 2049543 4033015 Nham_1838 Nitrobacter hamburgensis X14 multi-sensor signal transduction histidine kinase YP_577112.1 2047249 D 323097 CDS YP_577113.1 92117384 4033016 2049561..2050931 1 NC_007964.1 two component, sigma54 specific, Fis family transcriptional regulator 2050931 4033016 Nham_1839 Nitrobacter hamburgensis X14 two component, sigma54 specific, Fis family transcriptional regulator YP_577113.1 2049561 D 323097 CDS YP_577114.1 92117385 4033017 2050961..2051818 1 NC_007964.1 catalyzes the transamination of D-amino acids and their alpha-keto acids; D-amino acid aminotransferase 2051818 4033017 Nham_1840 Nitrobacter hamburgensis X14 D-amino acid aminotransferase YP_577114.1 2050961 D 323097 CDS YP_577115.1 92117386 4033018 2052001..2052249 1 NC_007964.1 Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 2052249 hfq 4033018 hfq Nitrobacter hamburgensis X14 RNA-binding protein Hfq YP_577115.1 2052001 D 323097 CDS YP_577116.1 92117387 4033019 2052318..2053652 1 NC_007964.1 HSR1-like GTP-binding protein 2053652 4033019 Nham_1842 Nitrobacter hamburgensis X14 HSR1-like GTP-binding protein YP_577116.1 2052318 D 323097 CDS YP_577117.1 92117388 4033020 2053657..2053893 1 NC_007964.1 hypothetical protein 2053893 4033020 Nham_1843 Nitrobacter hamburgensis X14 hypothetical protein YP_577117.1 2053657 D 323097 CDS YP_577118.1 92117389 4033021 2053890..2055326 1 NC_007964.1 succinate-semialdehyde dehydrogenase (NAD(P)+) 2055326 4033021 Nham_1844 Nitrobacter hamburgensis X14 succinate-semialdehyde dehydrogenase (NAD(P)+) YP_577118.1 2053890 D 323097 CDS YP_577119.1 92117390 4033022 complement(2055379..2056200) 1 NC_007964.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 2056200 mazG 4033022 mazG Nitrobacter hamburgensis X14 nucleoside triphosphate pyrophosphohydrolase YP_577119.1 2055379 R 323097 CDS YP_577120.1 92117391 4033023 2056335..2057051 1 NC_007964.1 ExsB protein 2057051 4033023 Nham_1846 Nitrobacter hamburgensis X14 ExsB protein YP_577120.1 2056335 D 323097 CDS YP_577121.1 92117392 4033024 2057235..2057531 1 NC_007964.1 hypothetical protein 2057531 4033024 Nham_1847 Nitrobacter hamburgensis X14 hypothetical protein YP_577121.1 2057235 D 323097 CDS YP_577122.1 92117393 4033025 2057586..2058857 1 NC_007964.1 outer membrane efflux protein 2058857 4033025 Nham_1848 Nitrobacter hamburgensis X14 outer membrane efflux protein YP_577122.1 2057586 D 323097 CDS YP_577123.1 92117394 4033026 2058854..2059837 1 NC_007964.1 secretion protein HlyD 2059837 4033026 Nham_1849 Nitrobacter hamburgensis X14 secretion protein HlyD YP_577123.1 2058854 D 323097 CDS YP_577124.1 92117395 4033027 2059827..2063045 1 NC_007964.1 heavy metal efflux pump CzcA 2063045 4033027 Nham_1850 Nitrobacter hamburgensis X14 heavy metal efflux pump CzcA YP_577124.1 2059827 D 323097 CDS YP_577125.1 92117396 4033028 2063231..2063584 1 NC_007964.1 hypothetical protein 2063584 4033028 Nham_1851 Nitrobacter hamburgensis X14 hypothetical protein YP_577125.1 2063231 D 323097 CDS YP_577126.1 92117397 4033029 2063682..2064092 1 NC_007964.1 hypothetical protein 2064092 4033029 Nham_1852 Nitrobacter hamburgensis X14 hypothetical protein YP_577126.1 2063682 D 323097 CDS YP_577127.1 92117398 4033030 2064089..2065504 1 NC_007964.1 secretion protein HlyD 2065504 4033030 Nham_1853 Nitrobacter hamburgensis X14 secretion protein HlyD YP_577127.1 2064089 D 323097 CDS YP_577128.1 92117399 4033031 2065501..2068683 1 NC_007964.1 heavy metal efflux pump CzcA 2068683 4033031 Nham_1854 Nitrobacter hamburgensis X14 heavy metal efflux pump CzcA YP_577128.1 2065501 D 323097 CDS YP_577129.1 92117400 4029941 2068751..2068951 1 NC_007964.1 hypothetical protein 2068951 4029941 Nham_1855 Nitrobacter hamburgensis X14 hypothetical protein YP_577129.1 2068751 D 323097 CDS YP_577130.1 92117401 4029942 2069446..2069757 1 NC_007964.1 hypothetical protein 2069757 4029942 Nham_1856 Nitrobacter hamburgensis X14 hypothetical protein YP_577130.1 2069446 D 323097 CDS YP_577131.1 92117402 4029943 complement(2069732..2070745) 1 NC_007964.1 hypothetical protein 2070745 4029943 Nham_1857 Nitrobacter hamburgensis X14 hypothetical protein YP_577131.1 2069732 R 323097 CDS YP_577132.1 92117403 4029944 complement(2070746..2071741) 1 NC_007964.1 hypothetical protein 2071741 4029944 Nham_1858 Nitrobacter hamburgensis X14 hypothetical protein YP_577132.1 2070746 R 323097 CDS YP_577133.1 92117404 4029945 complement(2071764..2074139) 1 NC_007964.1 integrase catalytic subunit 2074139 4029945 Nham_1859 Nitrobacter hamburgensis X14 integrase catalytic subunit YP_577133.1 2071764 R 323097 CDS YP_577134.1 92117405 4029946 complement(2074133..2074945) 1 NC_007964.1 hypothetical protein 2074945 4029946 Nham_1860 Nitrobacter hamburgensis X14 hypothetical protein YP_577134.1 2074133 R 323097 CDS YP_577135.1 92117406 4029947 complement(2075582..2076523) 1 NC_007964.1 phage integrase 2076523 4029947 Nham_1861 Nitrobacter hamburgensis X14 phage integrase YP_577135.1 2075582 R 323097 CDS YP_577136.1 92117407 4029948 2076554..2076841 1 NC_007964.1 hypothetical protein 2076841 4029948 Nham_1862 Nitrobacter hamburgensis X14 hypothetical protein YP_577136.1 2076554 D 323097 CDS YP_577137.1 92117408 4029949 complement(2076807..2077355) 1 NC_007964.1 hypothetical protein 2077355 4029949 Nham_1863 Nitrobacter hamburgensis X14 hypothetical protein YP_577137.1 2076807 R 323097 CDS YP_577138.1 92117409 4029950 complement(2077708..2078400) 1 NC_007964.1 hypothetical protein 2078400 4029950 Nham_1864 Nitrobacter hamburgensis X14 hypothetical protein YP_577138.1 2077708 R 323097 CDS YP_577139.1 92117410 4029951 2078668..2078859 1 NC_007964.1 hypothetical protein 2078859 4029951 Nham_1865 Nitrobacter hamburgensis X14 hypothetical protein YP_577139.1 2078668 D 323097 CDS YP_577140.1 92117411 4029952 complement(2079219..2079431) 1 NC_007964.1 transposase of insertion sequence ISRm2011-2, orfA protein 2079431 4029952 Nham_1866 Nitrobacter hamburgensis X14 transposase of insertion sequence ISRm2011-2, orfA protein YP_577140.1 2079219 R 323097 CDS YP_577141.1 92117412 4029953 complement(2079471..2080730) 1 NC_007964.1 major facilitator transporter 2080730 4029953 Nham_1867 Nitrobacter hamburgensis X14 major facilitator transporter YP_577141.1 2079471 R 323097 CDS YP_577142.1 92117413 4029954 complement(2080740..2081528) 1 NC_007964.1 hypothetical protein 2081528 4029954 Nham_1868 Nitrobacter hamburgensis X14 hypothetical protein YP_577142.1 2080740 R 323097 CDS YP_577143.1 92117414 4029955 complement(2081551..2082615) 1 NC_007964.1 hypothetical protein 2082615 4029955 Nham_1869 Nitrobacter hamburgensis X14 hypothetical protein YP_577143.1 2081551 R 323097 CDS YP_577144.1 92117415 4029956 complement(2082664..2083554) 1 NC_007964.1 hypothetical protein 2083554 4029956 Nham_1870 Nitrobacter hamburgensis X14 hypothetical protein YP_577144.1 2082664 R 323097 CDS YP_577145.1 92117416 4029958 complement(2084021..2084410) 1 NC_007964.1 hypothetical protein 2084410 4029958 Nham_1872 Nitrobacter hamburgensis X14 hypothetical protein YP_577145.1 2084021 R 323097 CDS YP_577146.1 92117417 4029579 2085490..2086617 1 NC_007964.1 Cys/Met metabolism pyridoxal-phosphate-dependent enzymes 2086617 4029579 Nham_1875 Nitrobacter hamburgensis X14 Cys/Met metabolism pyridoxal-phosphate-dependent enzymes YP_577146.1 2085490 D 323097 CDS YP_577147.1 92117418 4029580 complement(2086680..2088860) 1 NC_007964.1 hypothetical protein 2088860 4029580 Nham_1876 Nitrobacter hamburgensis X14 hypothetical protein YP_577147.1 2086680 R 323097 CDS YP_577148.1 92117419 4029582 complement(2091101..2092819) 1 NC_007964.1 sulfate transporter 2092819 4029582 Nham_1878 Nitrobacter hamburgensis X14 sulfate transporter YP_577148.1 2091101 R 323097 CDS YP_577149.1 92117420 4029583 complement(2093073..2094029) 1 NC_007964.1 peptidase S1 and S6, chymotrypsin/Hap 2094029 4029583 Nham_1879 Nitrobacter hamburgensis X14 peptidase S1 and S6, chymotrypsin/Hap YP_577149.1 2093073 R 323097 CDS YP_577150.1 92117421 4029584 2094212..2095084 1 NC_007964.1 hypothetical protein 2095084 4029584 Nham_1880 Nitrobacter hamburgensis X14 hypothetical protein YP_577150.1 2094212 D 323097 CDS YP_577151.1 92117422 4029585 2095120..2095719 1 NC_007964.1 LuxR family transcriptional regulator 2095719 4029585 Nham_1881 Nitrobacter hamburgensis X14 LuxR family transcriptional regulator YP_577151.1 2095120 D 323097 CDS YP_577152.1 92117423 4029586 complement(2095735..2096283) 1 NC_007964.1 cytochrome B561 2096283 4029586 Nham_1882 Nitrobacter hamburgensis X14 cytochrome B561 YP_577152.1 2095735 R 323097 CDS YP_577153.1 92117424 4029587 complement(2096312..2096584) 1 NC_007964.1 hypothetical protein 2096584 4029587 Nham_1883 Nitrobacter hamburgensis X14 hypothetical protein YP_577153.1 2096312 R 323097 CDS YP_577154.1 92117425 4029588 2096734..2097048 1 NC_007964.1 peptidase 2097048 4029588 Nham_1884 Nitrobacter hamburgensis X14 peptidase YP_577154.1 2096734 D 323097 CDS YP_577155.1 92117426 4029589 2097048..2097713 1 NC_007964.1 two component transcriptional regulator 2097713 4029589 Nham_1885 Nitrobacter hamburgensis X14 two component transcriptional regulator YP_577155.1 2097048 D 323097 CDS YP_577156.1 92117427 4029590 2097710..2099164 1 NC_007964.1 periplasmic sensor signal transduction histidine kinase 2099164 4029590 Nham_1886 Nitrobacter hamburgensis X14 periplasmic sensor signal transduction histidine kinase YP_577156.1 2097710 D 323097 CDS YP_577157.1 92117428 4029591 2099161..2099445 1 NC_007964.1 hypothetical protein 2099445 4029591 Nham_1887 Nitrobacter hamburgensis X14 hypothetical protein YP_577157.1 2099161 D 323097 CDS YP_577158.1 92117429 4029592 2099460..2100659 1 NC_007964.1 secretion protein HlyD 2100659 4029592 Nham_1888 Nitrobacter hamburgensis X14 secretion protein HlyD YP_577158.1 2099460 D 323097 CDS YP_577159.1 92117430 4029593 2100661..2103900 1 NC_007964.1 heavy metal efflux pump CzcA 2103900 4029593 Nham_1889 Nitrobacter hamburgensis X14 heavy metal efflux pump CzcA YP_577159.1 2100661 D 323097 CDS YP_577160.1 92117431 4029594 2103987..2104442 1 NC_007964.1 hypothetical protein 2104442 4029594 Nham_1890 Nitrobacter hamburgensis X14 hypothetical protein YP_577160.1 2103987 D 323097 CDS YP_577161.1 92117432 4029597 2105481..2105807 1 NC_007964.1 hypothetical protein 2105807 4029597 Nham_1893 Nitrobacter hamburgensis X14 hypothetical protein YP_577161.1 2105481 D 323097 CDS YP_577162.1 92117433 4033032 2106028..2106540 1 NC_007964.1 hypothetical protein 2106540 4033032 Nham_1894 Nitrobacter hamburgensis X14 hypothetical protein YP_577162.1 2106028 D 323097 CDS YP_577163.1 92117434 4033033 complement(2107941..2109116) 1 NC_007964.1 acetate kinase 2109116 4033033 Nham_1895 Nitrobacter hamburgensis X14 acetate kinase YP_577163.1 2107941 R 323097 CDS YP_577164.1 92117435 4033034 complement(2109162..2111570) 1 NC_007964.1 phosphoketolase 2111570 4033034 Nham_1896 Nitrobacter hamburgensis X14 phosphoketolase YP_577164.1 2109162 R 323097 CDS YP_577165.1 92117436 4033035 2111828..2112523 1 NC_007964.1 signal-transduction protein 2112523 4033035 Nham_1897 Nitrobacter hamburgensis X14 signal-transduction protein YP_577165.1 2111828 D 323097 CDS YP_577166.1 92117437 4033036 complement(2112663..2114261) 1 NC_007964.1 RNA-metabolising metallo-beta-lactamase 2114261 4033036 Nham_1898 Nitrobacter hamburgensis X14 RNA-metabolising metallo-beta-lactamase YP_577166.1 2112663 R 323097 CDS YP_577167.1 92117438 4033037 complement(2114258..2115178) 1 NC_007964.1 Catalyzes the formation of PRPP from ATP and ribose 5-phosphate; phosphoribosylpyrophosphate synthetase 2115178 4033037 Nham_1899 Nitrobacter hamburgensis X14 phosphoribosylpyrophosphate synthetase YP_577167.1 2114258 R 323097 CDS YP_577168.1 92117439 4033038 complement(2115175..2116767) 1 NC_007964.1 catalyzes the formation of thymine and 2-deoxy-alpha-D-ribose 1-phosphate from thymidine; thymidine phosphorylase 2116767 4033038 Nham_1900 Nitrobacter hamburgensis X14 thymidine phosphorylase YP_577168.1 2115175 R 323097 CDS YP_577169.1 92117440 4033039 2116951..2118192 1 NC_007964.1 membrane protein 2118192 4033039 Nham_1901 Nitrobacter hamburgensis X14 membrane protein YP_577169.1 2116951 D 323097 CDS YP_577170.1 92117441 4033040 complement(2118765..2119460) 1 NC_007964.1 hypothetical protein 2119460 4033040 Nham_1902 Nitrobacter hamburgensis X14 hypothetical protein YP_577170.1 2118765 R 323097 CDS YP_577171.1 92117442 4033041 complement(2119776..2120333) 1 NC_007964.1 nitroreductase 2120333 4033041 Nham_1903 Nitrobacter hamburgensis X14 nitroreductase YP_577171.1 2119776 R 323097 CDS YP_577172.1 92117443 4033042 complement(2120363..2120794) 1 NC_007964.1 hypothetical protein 2120794 4033042 Nham_1904 Nitrobacter hamburgensis X14 hypothetical protein YP_577172.1 2120363 R 323097 CDS YP_577173.1 92117444 4033043 complement(2120836..2121231) 1 NC_007964.1 response regulator receiver domain-containing protein 2121231 4033043 Nham_1905 Nitrobacter hamburgensis X14 response regulator receiver domain-containing protein YP_577173.1 2120836 R 323097 CDS YP_577174.1 92117445 4033044 complement(2121301..2121918) 1 NC_007964.1 response regulator for histidine kinase FixL; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes; response regulator FixJ 2121918 fixJ 4033044 fixJ Nitrobacter hamburgensis X14 response regulator FixJ YP_577174.1 2121301 R 323097 CDS YP_577175.1 92117446 4033045 complement(2121908..2123392) 1 NC_007964.1 PAS/PAC sensor signal transduction histidine kinase 2123392 4033045 Nham_1907 Nitrobacter hamburgensis X14 PAS/PAC sensor signal transduction histidine kinase YP_577175.1 2121908 R 323097 CDS YP_577176.1 92117447 4033046 2123577..2123843 1 NC_007964.1 hypothetical protein 2123843 4033046 Nham_1908 Nitrobacter hamburgensis X14 hypothetical protein YP_577176.1 2123577 D 323097 CDS YP_577177.1 92117448 4033047 complement(2123897..2124544) 1 NC_007964.1 transport-associated 2124544 4033047 Nham_1909 Nitrobacter hamburgensis X14 transport-associated YP_577177.1 2123897 R 323097 CDS YP_577178.1 92117449 4033048 complement(2124722..2125066) 1 NC_007964.1 hypothetical protein 2125066 4033048 Nham_1910 Nitrobacter hamburgensis X14 hypothetical protein YP_577178.1 2124722 R 323097 CDS YP_577179.1 92117450 4033049 2125304..2125891 1 NC_007964.1 hypothetical protein 2125891 4033049 Nham_1911 Nitrobacter hamburgensis X14 hypothetical protein YP_577179.1 2125304 D 323097 CDS YP_577180.1 92117451 4033050 complement(2125995..2126723) 1 NC_007964.1 signal-transduction protein 2126723 4033050 Nham_1912 Nitrobacter hamburgensis X14 signal-transduction protein YP_577180.1 2125995 R 323097 CDS YP_577181.1 92117452 4030860 2126988..2127824 1 NC_007964.1 hypothetical protein 2127824 4030860 Nham_1913 Nitrobacter hamburgensis X14 hypothetical protein YP_577181.1 2126988 D 323097 CDS YP_577182.1 92117453 4030861 complement(2127928..2128869) 1 NC_007964.1 hypothetical protein 2128869 4030861 Nham_1914 Nitrobacter hamburgensis X14 hypothetical protein YP_577182.1 2127928 R 323097 CDS YP_577183.1 92117454 4030862 complement(2128866..2130446) 1 NC_007964.1 hypothetical protein 2130446 4030862 Nham_1915 Nitrobacter hamburgensis X14 hypothetical protein YP_577183.1 2128866 R 323097 CDS YP_577184.1 92117455 4030863 complement(2130459..2131442) 1 NC_007964.1 alcohol dehydrogenase GroES-like protein 2131442 4030863 Nham_1916 Nitrobacter hamburgensis X14 alcohol dehydrogenase GroES-like protein YP_577184.1 2130459 R 323097 CDS YP_577185.1 92117456 4030864 2131612..2132082 1 NC_007964.1 heat shock protein Hsp20 2132082 4030864 Nham_1917 Nitrobacter hamburgensis X14 heat shock protein Hsp20 YP_577185.1 2131612 D 323097 CDS YP_577186.1 92117457 4030865 2132164..2132604 1 NC_007964.1 hypothetical protein 2132604 4030865 Nham_1918 Nitrobacter hamburgensis X14 hypothetical protein YP_577186.1 2132164 D 323097 CDS YP_577187.1 92117458 4030866 2132808..2135501 1 NC_007964.1 N-acetyltransferase GCN5 2135501 4030866 Nham_1919 Nitrobacter hamburgensis X14 N-acetyltransferase GCN5 YP_577187.1 2132808 D 323097 CDS YP_577188.1 92117459 4030867 complement(2135527..2135928) 1 NC_007964.1 hypothetical protein 2135928 4030867 Nham_1920 Nitrobacter hamburgensis X14 hypothetical protein YP_577188.1 2135527 R 323097 CDS YP_577189.1 92117460 4030868 2136114..2137280 1 NC_007964.1 hypothetical protein 2137280 4030868 Nham_1921 Nitrobacter hamburgensis X14 hypothetical protein YP_577189.1 2136114 D 323097 CDS YP_577190.1 92117461 4030869 2137283..2138062 1 NC_007964.1 ABC transporter 2138062 4030869 Nham_1922 Nitrobacter hamburgensis X14 ABC transporter YP_577190.1 2137283 D 323097 CDS YP_577191.1 92117462 4030870 2138066..2139175 1 NC_007964.1 hypothetical protein 2139175 4030870 Nham_1923 Nitrobacter hamburgensis X14 hypothetical protein YP_577191.1 2138066 D 323097 CDS YP_577192.1 92117463 4030871 2139604..2140071 1 NC_007964.1 hypothetical protein 2140071 4030871 Nham_1924 Nitrobacter hamburgensis X14 hypothetical protein YP_577192.1 2139604 D 323097 CDS YP_577193.1 92117464 4030872 complement(2140207..2140533) 1 NC_007964.1 hypothetical protein 2140533 4030872 Nham_1925 Nitrobacter hamburgensis X14 hypothetical protein YP_577193.1 2140207 R 323097 CDS YP_577194.1 92117465 4030873 2140714..2141547 1 NC_007964.1 hypothetical protein 2141547 4030873 Nham_1926 Nitrobacter hamburgensis X14 hypothetical protein YP_577194.1 2140714 D 323097 CDS YP_577195.1 92117466 4030875 complement(2143906..2145018) 1 NC_007964.1 zinc-binding alcohol dehydrogenase 2145018 4030875 Nham_1928 Nitrobacter hamburgensis X14 zinc-binding alcohol dehydrogenase YP_577195.1 2143906 R 323097 CDS YP_577196.1 92117467 4030876 2145742..2147784 1 NC_007964.1 protein-L-isoaspartate O-methyltransferase 2147784 4030876 Nham_1929 Nitrobacter hamburgensis X14 protein-L-isoaspartate O-methyltransferase YP_577196.1 2145742 D 323097 CDS YP_577197.1 92117468 4030877 2147844..2148299 1 NC_007964.1 hypothetical protein 2148299 4030877 Nham_1930 Nitrobacter hamburgensis X14 hypothetical protein YP_577197.1 2147844 D 323097 CDS YP_577198.1 92117469 4030536 complement(2149587..2150273) 1 NC_007964.1 hypothetical protein 2150273 4030536 Nham_1933 Nitrobacter hamburgensis X14 hypothetical protein YP_577198.1 2149587 R 323097 CDS YP_577199.1 92117470 4030537 2150974..2151450 1 NC_007964.1 hypothetical protein 2151450 4030537 Nham_1934 Nitrobacter hamburgensis X14 hypothetical protein YP_577199.1 2150974 D 323097 CDS YP_577200.1 92117471 4030538 2152077..2152895 1 NC_007964.1 hypothetical protein 2152895 4030538 Nham_1935 Nitrobacter hamburgensis X14 hypothetical protein YP_577200.1 2152077 D 323097 CDS YP_577201.1 92117472 4030539 complement(2153328..2153660) 1 NC_007964.1 hypothetical protein 2153660 4030539 Nham_1936 Nitrobacter hamburgensis X14 hypothetical protein YP_577201.1 2153328 R 323097 CDS YP_577202.1 92117473 4030540 complement(2153664..2154773) 1 NC_007964.1 acyltransferase 3 2154773 4030540 Nham_1937 Nitrobacter hamburgensis X14 acyltransferase 3 YP_577202.1 2153664 R 323097 CDS YP_577203.1 92117474 4030541 complement(2154867..2156159) 1 NC_007964.1 chromate transporter 2156159 4030541 Nham_1938 Nitrobacter hamburgensis X14 chromate transporter YP_577203.1 2154867 R 323097 CDS YP_577204.1 92117475 4030542 2156321..2157445 1 NC_007964.1 transposase IS116/IS110/IS902 2157445 4030542 Nham_1939 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_577204.1 2156321 D 323097 CDS YP_577205.1 92117476 4030543 complement(2158893..2159138) 1 NC_007964.1 hypothetical protein 2159138 4030543 Nham_1940 Nitrobacter hamburgensis X14 hypothetical protein YP_577205.1 2158893 R 323097 CDS YP_577206.1 92117477 4030544 2159350..2159904 1 NC_007964.1 cytochrome B561 2159904 4030544 Nham_1941 Nitrobacter hamburgensis X14 cytochrome B561 YP_577206.1 2159350 D 323097 CDS YP_577207.1 92117478 4030545 2160238..2160486 1 NC_007964.1 hypothetical protein 2160486 4030545 Nham_1942 Nitrobacter hamburgensis X14 hypothetical protein YP_577207.1 2160238 D 323097 CDS YP_577208.1 92117479 4030546 2160623..2160982 1 NC_007964.1 hypothetical protein 2160982 4030546 Nham_1943 Nitrobacter hamburgensis X14 hypothetical protein YP_577208.1 2160623 D 323097 CDS YP_577209.1 92117480 4030547 complement(2160974..2161246) 1 NC_007964.1 hypothetical protein 2161246 4030547 Nham_1944 Nitrobacter hamburgensis X14 hypothetical protein YP_577209.1 2160974 R 323097 CDS YP_577210.1 92117481 4030548 complement(2161421..2161756) 1 NC_007964.1 hypothetical protein 2161756 4030548 Nham_1945 Nitrobacter hamburgensis X14 hypothetical protein YP_577210.1 2161421 R 323097 CDS YP_577211.1 92117482 4030550 complement(2162482..2163162) 1 NC_007964.1 signal-transduction protein 2163162 4030550 Nham_1947 Nitrobacter hamburgensis X14 signal-transduction protein YP_577211.1 2162482 R 323097 CDS YP_577212.1 92117483 4030551 2164015..2164854 1 NC_007964.1 hypothetical protein 2164854 4030551 Nham_1948 Nitrobacter hamburgensis X14 hypothetical protein YP_577212.1 2164015 D 323097 CDS YP_577213.1 92117484 4030552 2165460..2167316 1 NC_007964.1 heavy metal translocating P-type ATPase 2167316 4030552 Nham_1949 Nitrobacter hamburgensis X14 heavy metal translocating P-type ATPase YP_577213.1 2165460 D 323097 CDS YP_577214.1 92117485 4030554 complement(2168170..2168865) 1 NC_007964.1 transcriptional regulator that positively regulated fixLJ operon; upregulated transcription by FixJ; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes; transcriptional regulator FixK 2168865 fixK 4030554 fixK Nitrobacter hamburgensis X14 transcriptional regulator FixK YP_577214.1 2168170 R 323097 CDS YP_577215.1 92117486 4033088 2169287..2170093 1 NC_007964.1 hypothetical protein 2170093 4033088 Nham_1952 Nitrobacter hamburgensis X14 hypothetical protein YP_577215.1 2169287 D 323097 CDS YP_577216.1 92117487 4033090 2170384..2171541 1 NC_007964.1 transposase IS116/IS110/IS902 2171541 4033090 Nham_1954 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_577216.1 2170384 D 323097 CDS YP_577217.1 92117488 4033091 complement(2171910..2172035) 1 NC_007964.1 hypothetical protein 2172035 4033091 Nham_1955 Nitrobacter hamburgensis X14 hypothetical protein YP_577217.1 2171910 R 323097 CDS YP_577218.1 92117489 4033092 2173205..2173426 1 NC_007964.1 hypothetical protein 2173426 4033092 Nham_1956 Nitrobacter hamburgensis X14 hypothetical protein YP_577218.1 2173205 D 323097 CDS YP_577219.1 92117490 4033093 2173513..2173725 1 NC_007964.1 hypothetical protein 2173725 4033093 Nham_1957 Nitrobacter hamburgensis X14 hypothetical protein YP_577219.1 2173513 D 323097 CDS YP_577220.1 92117491 4033094 2173795..2174130 1 NC_007964.1 hypothetical protein 2174130 4033094 Nham_1958 Nitrobacter hamburgensis X14 hypothetical protein YP_577220.1 2173795 D 323097 CDS YP_577221.1 92117492 4033095 2174225..2175256 1 NC_007964.1 transposase IS116/IS110/IS902 2175256 4033095 Nham_1959 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_577221.1 2174225 D 323097 CDS YP_577222.1 92117493 4033096 complement(2176480..2176776) 1 NC_007964.1 hypothetical protein 2176776 4033096 Nham_1960 Nitrobacter hamburgensis X14 hypothetical protein YP_577222.1 2176480 R 323097 CDS YP_577223.1 92117494 4033097 2176838..2177320 1 NC_007964.1 Ion transport 2 2177320 4033097 Nham_1961 Nitrobacter hamburgensis X14 Ion transport 2 YP_577223.1 2176838 D 323097 CDS YP_577224.1 92117495 4033098 2177748..2178224 1 NC_007964.1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 2178224 4033098 Nham_1962 Nitrobacter hamburgensis X14 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_577224.1 2177748 D 323097 CDS YP_577225.1 92117496 4033099 2178701..2178910 1 NC_007964.1 hypothetical protein 2178910 4033099 Nham_1963 Nitrobacter hamburgensis X14 hypothetical protein YP_577225.1 2178701 D 323097 CDS YP_577226.1 92117497 4033100 2178897..2179139 1 NC_007964.1 hypothetical protein 2179139 4033100 Nham_1964 Nitrobacter hamburgensis X14 hypothetical protein YP_577226.1 2178897 D 323097 CDS YP_577227.1 92117498 4033101 2179371..2179784 1 NC_007964.1 transposase IS3/IS911 2179784 4033101 Nham_1965 Nitrobacter hamburgensis X14 transposase IS3/IS911 YP_577227.1 2179371 D 323097 CDS YP_577228.1 92117499 4033102 2180929..2181189 1 NC_007964.1 hypothetical protein 2181189 4033102 Nham_1966 Nitrobacter hamburgensis X14 hypothetical protein YP_577228.1 2180929 D 323097 CDS YP_577229.1 92117500 4033103 complement(2181179..2181532) 1 NC_007964.1 hypothetical protein 2181532 4033103 Nham_1967 Nitrobacter hamburgensis X14 hypothetical protein YP_577229.1 2181179 R 323097 CDS YP_577230.1 92117501 4033104 2181856..2182224 1 NC_007964.1 hypothetical protein 2182224 4033104 Nham_1968 Nitrobacter hamburgensis X14 hypothetical protein YP_577230.1 2181856 D 323097 CDS YP_577231.1 92117502 4033105 2182235..2182753 1 NC_007964.1 nuclease (SNase-like) 2182753 4033105 Nham_1969 Nitrobacter hamburgensis X14 nuclease (SNase-like) YP_577231.1 2182235 D 323097 CDS YP_577232.1 92117503 4029349 complement(2186791..2187579) 1 NC_007964.1 hypothetical protein 2187579 4029349 Nham_1972 Nitrobacter hamburgensis X14 hypothetical protein YP_577232.1 2186791 R 323097 CDS YP_577233.1 92117504 4029350 2187941..2189218 1 NC_007964.1 hypothetical protein 2189218 4029350 Nham_1973 Nitrobacter hamburgensis X14 hypothetical protein YP_577233.1 2187941 D 323097 CDS YP_577234.1 92117505 4029351 2189338..2190807 1 NC_007964.1 hypothetical protein 2190807 4029351 Nham_1974 Nitrobacter hamburgensis X14 hypothetical protein YP_577234.1 2189338 D 323097 CDS YP_577235.1 92117506 4029352 complement(2191568..2191840) 1 NC_007964.1 hypothetical protein 2191840 4029352 Nham_1975 Nitrobacter hamburgensis X14 hypothetical protein YP_577235.1 2191568 R 323097 CDS YP_577236.1 92117507 4029353 complement(2192168..2192881) 1 NC_007964.1 hypothetical protein 2192881 4029353 Nham_1976 Nitrobacter hamburgensis X14 hypothetical protein YP_577236.1 2192168 R 323097 CDS YP_577237.1 92117508 4029354 complement(2192904..2193266) 1 NC_007964.1 hypothetical protein 2193266 4029354 Nham_1977 Nitrobacter hamburgensis X14 hypothetical protein YP_577237.1 2192904 R 323097 CDS YP_577238.1 92117509 4029355 complement(2193309..2193623) 1 NC_007964.1 hypothetical protein 2193623 4029355 Nham_1978 Nitrobacter hamburgensis X14 hypothetical protein YP_577238.1 2193309 R 323097 CDS YP_577239.1 92117510 4029356 complement(2193623..2195116) 1 NC_007964.1 ATPase AAA 2195116 4029356 Nham_1979 Nitrobacter hamburgensis X14 ATPase AAA YP_577239.1 2193623 R 323097 CDS YP_577240.1 92117511 4029357 complement(2195193..2195852) 1 NC_007964.1 hypothetical protein 2195852 4029357 Nham_1980 Nitrobacter hamburgensis X14 hypothetical protein YP_577240.1 2195193 R 323097 CDS YP_577241.1 92117512 4029358 complement(2195864..2196709) 1 NC_007964.1 metallophosphoesterase 2196709 4029358 Nham_1981 Nitrobacter hamburgensis X14 metallophosphoesterase YP_577241.1 2195864 R 323097 CDS YP_577242.1 92117513 4029359 complement(2197146..2197685) 1 NC_007964.1 hypothetical protein 2197685 4029359 Nham_1982 Nitrobacter hamburgensis X14 hypothetical protein YP_577242.1 2197146 R 323097 CDS YP_577243.1 92117514 4029360 2197732..2198085 1 NC_007964.1 hypothetical protein 2198085 4029360 Nham_1983 Nitrobacter hamburgensis X14 hypothetical protein YP_577243.1 2197732 D 323097 CDS YP_577244.1 92117515 4029361 complement(2198640..2199851) 1 NC_007964.1 hypothetical protein 2199851 4029361 Nham_1984 Nitrobacter hamburgensis X14 hypothetical protein YP_577244.1 2198640 R 323097 CDS YP_577245.1 92117516 4029362 complement(2199957..2203307) 1 NC_007964.1 type III restriction enzyme, res subunit 2203307 4029362 Nham_1985 Nitrobacter hamburgensis X14 type III restriction enzyme, res subunit YP_577245.1 2199957 R 323097 CDS YP_577246.1 92117517 4029363 2203536..2204819 1 NC_007964.1 hypothetical protein 2204819 4029363 Nham_1986 Nitrobacter hamburgensis X14 hypothetical protein YP_577246.1 2203536 D 323097 CDS YP_577247.1 92117518 4029364 2204958..2205425 1 NC_007964.1 NUDIX hydrolase 2205425 4029364 Nham_1987 Nitrobacter hamburgensis X14 NUDIX hydrolase YP_577247.1 2204958 D 323097 CDS YP_577248.1 92117519 4029365 2205422..2205844 1 NC_007964.1 hypothetical protein 2205844 4029365 Nham_1988 Nitrobacter hamburgensis X14 hypothetical protein YP_577248.1 2205422 D 323097 CDS YP_577249.1 92117520 4029367 2206419..2206766 1 NC_007964.1 hypothetical protein 2206766 4029367 Nham_1990 Nitrobacter hamburgensis X14 hypothetical protein YP_577249.1 2206419 D 323097 CDS YP_577250.1 92117521 4031544 2206842..2207231 1 NC_007964.1 hypothetical protein 2207231 4031544 Nham_1991 Nitrobacter hamburgensis X14 hypothetical protein YP_577250.1 2206842 D 323097 CDS YP_577251.1 92117522 4031545 complement(2207710..2208180) 1 NC_007964.1 hypothetical protein 2208180 4031545 Nham_1992 Nitrobacter hamburgensis X14 hypothetical protein YP_577251.1 2207710 R 323097 CDS YP_577252.1 92117523 4031546 2208327..2210432 1 NC_007964.1 helicase c2 2210432 4031546 Nham_1993 Nitrobacter hamburgensis X14 helicase c2 YP_577252.1 2208327 D 323097 CDS YP_577253.1 92117524 4031547 2210995..2212767 1 NC_007964.1 ATP-dependent OLD family endonuclease 2212767 4031547 Nham_1994 Nitrobacter hamburgensis X14 ATP-dependent OLD family endonuclease YP_577253.1 2210995 D 323097 CDS YP_577254.1 92117525 4031548 2212764..2214278 1 NC_007964.1 superfamily I DNA/RNA helicase-like protein 2214278 4031548 Nham_1995 Nitrobacter hamburgensis X14 superfamily I DNA/RNA helicase-like protein YP_577254.1 2212764 D 323097 CDS YP_577255.1 92117526 4031549 2214695..2217349 1 NC_007964.1 hypothetical protein 2217349 4031549 Nham_1996 Nitrobacter hamburgensis X14 hypothetical protein YP_577255.1 2214695 D 323097 CDS YP_577256.1 92117527 4031550 2217346..2220678 1 NC_007964.1 UvrD/REP helicase 2220678 4031550 Nham_1997 Nitrobacter hamburgensis X14 UvrD/REP helicase YP_577256.1 2217346 D 323097 CDS YP_577257.1 92117528 4031551 complement(2220689..2220922) 1 NC_007964.1 hypothetical protein 2220922 4031551 Nham_1998 Nitrobacter hamburgensis X14 hypothetical protein YP_577257.1 2220689 R 323097 CDS YP_577258.1 92117529 4031552 complement(2221204..2222232) 1 NC_007964.1 transposase IS116/IS110/IS902 2222232 4031552 Nham_1999 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_577258.1 2221204 R 323097 CDS YP_577259.1 92117530 4031553 2222476..2224869 1 NC_007964.1 hypothetical protein 2224869 4031553 Nham_2000 Nitrobacter hamburgensis X14 hypothetical protein YP_577259.1 2222476 D 323097 CDS YP_577260.1 92117531 4031554 2224866..2226197 1 NC_007964.1 hypothetical protein 2226197 4031554 Nham_2001 Nitrobacter hamburgensis X14 hypothetical protein YP_577260.1 2224866 D 323097 CDS YP_577261.1 92117532 4031555 2226166..2228406 1 NC_007964.1 DEAD/DEAH box helicase 2228406 4031555 Nham_2002 Nitrobacter hamburgensis X14 DEAD/DEAH box helicase YP_577261.1 2226166 D 323097 CDS YP_577262.1 92117533 4031556 2228403..2229221 1 NC_007964.1 hypothetical protein 2229221 4031556 Nham_2003 Nitrobacter hamburgensis X14 hypothetical protein YP_577262.1 2228403 D 323097 CDS YP_577263.1 92117534 4031557 complement(2230055..2230447) 1 NC_007964.1 hypothetical protein 2230447 4031557 Nham_2004 Nitrobacter hamburgensis X14 hypothetical protein YP_577263.1 2230055 R 323097 CDS YP_577264.1 92117535 4031558 2230564..2232207 1 NC_007964.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 2232207 4031558 Nham_2005 Nitrobacter hamburgensis X14 acyl-CoA synthetase YP_577264.1 2230564 D 323097 CDS YP_577265.1 92117536 4031559 complement(2232212..2233015) 1 NC_007964.1 hypothetical protein 2233015 4031559 Nham_2006 Nitrobacter hamburgensis X14 hypothetical protein YP_577265.1 2232212 R 323097 CDS YP_577266.1 92117537 4031560 complement(2233012..2233803) 1 NC_007964.1 TatD-related deoxyribonuclease 2233803 4031560 Nham_2007 Nitrobacter hamburgensis X14 TatD-related deoxyribonuclease YP_577266.1 2233012 R 323097 CDS YP_577267.1 92117538 4031561 complement(2233818..2235797) 1 NC_007964.1 methionyl-tRNA synthetase 2235797 4031561 Nham_2008 Nitrobacter hamburgensis X14 methionyl-tRNA synthetase YP_577267.1 2233818 R 323097 CDS YP_577268.1 92117539 4031562 complement(2235850..2236890) 1 NC_007964.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 2236890 4031562 Nham_2009 Nitrobacter hamburgensis X14 DNA polymerase III subunit delta' YP_577268.1 2235850 R 323097 CDS YP_577269.1 92117540 4031563 complement(2236887..2237579) 1 NC_007964.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 2237579 4031563 Nham_2010 Nitrobacter hamburgensis X14 thymidylate kinase YP_577269.1 2236887 R 323097 CDS YP_577270.1 92117541 4031391 complement(2237579..2238823) 1 NC_007964.1 Serine-type D-Ala-D-Ala carboxypeptidase 2238823 4031391 Nham_2011 Nitrobacter hamburgensis X14 Serine-type D-Ala-D-Ala carboxypeptidase YP_577270.1 2237579 R 323097 CDS YP_577271.1 92117542 4031392 complement(2238940..2239878) 1 NC_007964.1 rare lipoprotein A 2239878 4031392 Nham_2012 Nitrobacter hamburgensis X14 rare lipoprotein A YP_577271.1 2238940 R 323097 CDS YP_577272.1 92117543 4031395 2241144..2242394 1 NC_007964.1 phage integrase 2242394 4031395 Nham_2014 Nitrobacter hamburgensis X14 phage integrase YP_577272.1 2241144 D 323097 CDS YP_577273.1 92117544 4031396 complement(2242440..2242853) 1 NC_007964.1 hypothetical protein 2242853 4031396 Nham_2015 Nitrobacter hamburgensis X14 hypothetical protein YP_577273.1 2242440 R 323097 CDS YP_577274.1 92117545 4031397 2243194..2243688 1 NC_007964.1 hypothetical protein 2243688 4031397 Nham_2016 Nitrobacter hamburgensis X14 hypothetical protein YP_577274.1 2243194 D 323097 CDS YP_577275.1 92117546 4031398 2243873..2244379 1 NC_007964.1 hypothetical protein 2244379 4031398 Nham_2017 Nitrobacter hamburgensis X14 hypothetical protein YP_577275.1 2243873 D 323097 CDS YP_577276.1 92117547 4031399 complement(2244483..2244950) 1 NC_007964.1 hypothetical protein 2244950 4031399 Nham_2018 Nitrobacter hamburgensis X14 hypothetical protein YP_577276.1 2244483 R 323097 CDS YP_577277.1 92117548 4031400 complement(2244950..2245285) 1 NC_007964.1 hypothetical protein 2245285 4031400 Nham_2019 Nitrobacter hamburgensis X14 hypothetical protein YP_577277.1 2244950 R 323097 CDS YP_577278.1 92117549 4031401 complement(2245282..2246910) 1 NC_007964.1 phage terminase 2246910 4031401 Nham_2020 Nitrobacter hamburgensis X14 phage terminase YP_577278.1 2245282 R 323097 CDS YP_577279.1 92117550 4031402 complement(2246913..2247326) 1 NC_007964.1 phage terminase, small subunit , P27 2247326 4031402 Nham_2021 Nitrobacter hamburgensis X14 phage terminase, small subunit , P27 YP_577279.1 2246913 R 323097 CDS YP_577280.1 92117551 4031403 complement(2247326..2247625) 1 NC_007964.1 phage protein 2247625 4031403 Nham_2022 Nitrobacter hamburgensis X14 phage protein YP_577280.1 2247326 R 323097 CDS YP_577281.1 92117552 4031404 complement(2248011..2248364) 1 NC_007964.1 HNH nuclease / phage phi-105 holin-like protein 2248364 4031404 Nham_2023 Nitrobacter hamburgensis X14 HNH nuclease / phage phi-105 holin-like protein YP_577281.1 2248011 R 323097 CDS YP_577282.1 92117553 4031405 complement(2248590..2248976) 1 NC_007964.1 hypothetical protein 2248976 4031405 Nham_2024 Nitrobacter hamburgensis X14 hypothetical protein YP_577282.1 2248590 R 323097 CDS YP_577283.1 92117554 4031406 complement(2249036..2250184) 1 NC_007964.1 phage major capsid protein, HK97 2250184 4031406 Nham_2025 Nitrobacter hamburgensis X14 phage major capsid protein, HK97 YP_577283.1 2249036 R 323097 CDS YP_577284.1 92117555 4031407 complement(2250192..2250725) 1 NC_007964.1 peptidase U35, phage prohead HK97 2250725 4031407 Nham_2026 Nitrobacter hamburgensis X14 peptidase U35, phage prohead HK97 YP_577284.1 2250192 R 323097 CDS YP_577285.1 92117556 4031408 complement(2250722..2251942) 1 NC_007964.1 phage portal protein 2251942 4031408 Nham_2027 Nitrobacter hamburgensis X14 phage portal protein YP_577285.1 2250722 R 323097 CDS YP_577286.1 92117557 4029291 complement(2252141..2252407) 1 NC_007964.1 hypothetical protein 2252407 4029291 Nham_2028 Nitrobacter hamburgensis X14 hypothetical protein YP_577286.1 2252141 R 323097 CDS YP_577287.1 92117558 4029292 complement(2252386..2253282) 1 NC_007964.1 hypothetical protein 2253282 4029292 Nham_2029 Nitrobacter hamburgensis X14 hypothetical protein YP_577287.1 2252386 R 323097 CDS YP_577288.1 92117559 4029293 complement(2253473..2254255) 1 NC_007964.1 hypothetical protein 2254255 4029293 Nham_2030 Nitrobacter hamburgensis X14 hypothetical protein YP_577288.1 2253473 R 323097 CDS YP_577289.1 92117560 4029294 complement(2254516..2256381) 1 NC_007964.1 ATPase-like protein 2256381 4029294 Nham_2031 Nitrobacter hamburgensis X14 ATPase-like protein YP_577289.1 2254516 R 323097 CDS YP_577290.1 92117561 4029295 complement(2256557..2257831) 1 NC_007964.1 hypothetical protein 2257831 4029295 Nham_2032 Nitrobacter hamburgensis X14 hypothetical protein YP_577290.1 2256557 R 323097 CDS YP_577291.1 92117562 4029296 complement(2257828..2258034) 1 NC_007964.1 phage transcriptional regulator, AlpA 2258034 4029296 Nham_2033 Nitrobacter hamburgensis X14 phage transcriptional regulator, AlpA YP_577291.1 2257828 R 323097 CDS YP_577292.1 92117563 4029297 complement(2258557..2258760) 1 NC_007964.1 cold-shock DNA-binding domain-containing protein 2258760 4029297 Nham_2034 Nitrobacter hamburgensis X14 cold-shock DNA-binding domain-containing protein YP_577292.1 2258557 R 323097 CDS YP_577293.1 92117564 4029298 complement(2258882..2259157) 1 NC_007964.1 hypothetical protein 2259157 4029298 Nham_2035 Nitrobacter hamburgensis X14 hypothetical protein YP_577293.1 2258882 R 323097 CDS YP_577294.1 92117565 4029299 complement(2259204..2259458) 1 NC_007964.1 hypothetical protein 2259458 4029299 Nham_2036 Nitrobacter hamburgensis X14 hypothetical protein YP_577294.1 2259204 R 323097 CDS YP_577295.1 92117566 4029300 2259878..2260240 1 NC_007964.1 hypothetical protein 2260240 4029300 Nham_2037 Nitrobacter hamburgensis X14 hypothetical protein YP_577295.1 2259878 D 323097 CDS YP_577296.1 92117567 4029301 2262003..2262470 1 NC_007964.1 hypothetical protein 2262470 4029301 Nham_2038 Nitrobacter hamburgensis X14 hypothetical protein YP_577296.1 2262003 D 323097 CDS YP_577297.1 92117568 4029302 complement(2262590..2263000) 1 NC_007964.1 cupin 2263000 4029302 Nham_2039 Nitrobacter hamburgensis X14 cupin YP_577297.1 2262590 R 323097 CDS YP_577298.1 92117569 4029303 2263123..2263854 1 NC_007964.1 hypothetical protein 2263854 4029303 Nham_2040 Nitrobacter hamburgensis X14 hypothetical protein YP_577298.1 2263123 D 323097 CDS YP_577299.1 92117570 4029304 2263851..2264888 1 NC_007964.1 allophanate hydrolase subunit 2 2264888 4029304 Nham_2041 Nitrobacter hamburgensis X14 allophanate hydrolase subunit 2 YP_577299.1 2263851 D 323097 CDS YP_577300.1 92117571 4029305 2264922..2265689 1 NC_007964.1 LamB/YcsF family protein 2265689 4029305 Nham_2042 Nitrobacter hamburgensis X14 LamB/YcsF family protein YP_577300.1 2264922 D 323097 CDS YP_577301.1 92117572 4029306 complement(2265864..2266118) 1 NC_007964.1 hypothetical protein 2266118 4029306 Nham_2043 Nitrobacter hamburgensis X14 hypothetical protein YP_577301.1 2265864 R 323097 CDS YP_577302.1 92117573 4029307 complement(2266129..2267103) 1 NC_007964.1 zinc-binding alcohol dehydrogenase 2267103 4029307 Nham_2044 Nitrobacter hamburgensis X14 zinc-binding alcohol dehydrogenase YP_577302.1 2266129 R 323097 CDS YP_577303.1 92117574 4029308 complement(2267193..2267918) 1 NC_007964.1 integral membrane protein TerC 2267918 4029308 Nham_2045 Nitrobacter hamburgensis X14 integral membrane protein TerC YP_577303.1 2267193 R 323097 CDS YP_577304.1 92117575 4029309 complement(2267915..2268649) 1 NC_007964.1 phosphatidylcholine synthase 2268649 4029309 Nham_2046 Nitrobacter hamburgensis X14 phosphatidylcholine synthase YP_577304.1 2267915 R 323097 CDS YP_577305.1 92117576 4029310 2268749..2270026 1 NC_007964.1 2-octaprenyl-6-methoxyphenyl hydroxylase 2270026 4029310 Nham_2047 Nitrobacter hamburgensis X14 2-octaprenyl-6-methoxyphenyl hydroxylase YP_577305.1 2268749 D 323097 CDS YP_577306.1 92117577 4031468 2270163..2270495 1 NC_007964.1 hemimethylated DNA-binding region 2270495 4031468 Nham_2048 Nitrobacter hamburgensis X14 hemimethylated DNA-binding region YP_577306.1 2270163 D 323097 CDS YP_577307.1 92117578 4031469 complement(2270581..2271333) 1 NC_007964.1 invasion associated locus B 2271333 4031469 Nham_2049 Nitrobacter hamburgensis X14 invasion associated locus B YP_577307.1 2270581 R 323097 CDS YP_577308.1 92117579 4031470 2271562..2273424 1 NC_007964.1 extracellular solute-binding protein 2273424 4031470 Nham_2050 Nitrobacter hamburgensis X14 extracellular solute-binding protein YP_577308.1 2271562 D 323097 CDS YP_577309.1 92117580 4031471 2273429..2274934 1 NC_007964.1 AMP-dependent synthetase and ligase 2274934 4031471 Nham_2051 Nitrobacter hamburgensis X14 AMP-dependent synthetase and ligase YP_577309.1 2273429 D 323097 CDS YP_577310.1 92117581 4031472 2275018..2276253 1 NC_007964.1 hypothetical protein 2276253 4031472 Nham_2052 Nitrobacter hamburgensis X14 hypothetical protein YP_577310.1 2275018 D 323097 CDS YP_577311.1 92117582 4031473 complement(2276259..2279780) 1 NC_007964.1 transcription-repair coupling factor 2279780 4031473 Nham_2053 Nitrobacter hamburgensis X14 transcription-repair coupling factor YP_577311.1 2276259 R 323097 CDS YP_577312.1 92117583 4031474 complement(2279780..2280070) 1 NC_007964.1 hypothetical protein 2280070 4031474 Nham_2054 Nitrobacter hamburgensis X14 hypothetical protein YP_577312.1 2279780 R 323097 CDS YP_577313.1 92117584 4031475 2280230..2282329 1 NC_007964.1 DEAD/DEAH box helicase 2282329 4031475 Nham_2055 Nitrobacter hamburgensis X14 DEAD/DEAH box helicase YP_577313.1 2280230 D 323097 CDS YP_577314.1 92117585 4031476 complement(2282333..2283103) 1 NC_007964.1 hypothetical protein 2283103 4031476 Nham_2056 Nitrobacter hamburgensis X14 hypothetical protein YP_577314.1 2282333 R 323097 CDS YP_577315.1 92117586 4031477 complement(2283207..2285033) 1 NC_007964.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 2285033 4031477 Nham_2057 Nitrobacter hamburgensis X14 glucosamine--fructose-6-phosphate aminotransferase YP_577315.1 2283207 R 323097 CDS YP_577316.1 92117587 4031478 complement(2285039..2285329) 1 NC_007964.1 hypothetical protein 2285329 4031478 Nham_2058 Nitrobacter hamburgensis X14 hypothetical protein YP_577316.1 2285039 R 323097 CDS YP_577317.1 92117588 4031479 2285384..2285578 1 NC_007964.1 hypothetical protein 2285578 4031479 Nham_2059 Nitrobacter hamburgensis X14 hypothetical protein YP_577317.1 2285384 D 323097 CDS YP_577318.1 92117589 4031481 2286189..2286839 1 NC_007964.1 hypothetical protein 2286839 4031481 Nham_2060 Nitrobacter hamburgensis X14 hypothetical protein YP_577318.1 2286189 D 323097 CDS YP_577319.1 92117590 4031483 complement(2287199..2287915) 1 NC_007964.1 hypothetical protein 2287915 4031483 Nham_2062 Nitrobacter hamburgensis X14 hypothetical protein YP_577319.1 2287199 R 323097 CDS YP_577320.1 92117591 4031484 complement(2287989..2291087) 1 NC_007964.1 acriflavin resistance protein 2291087 4031484 Nham_2063 Nitrobacter hamburgensis X14 acriflavin resistance protein YP_577320.1 2287989 R 323097 CDS YP_577321.1 92117592 4031485 complement(2291087..2294215) 1 NC_007964.1 acriflavin resistance protein 2294215 4031485 Nham_2064 Nitrobacter hamburgensis X14 acriflavin resistance protein YP_577321.1 2291087 R 323097 CDS YP_577322.1 92117593 4031239 complement(2294281..2295645) 1 NC_007964.1 secretion protein HlyD 2295645 4031239 Nham_2065 Nitrobacter hamburgensis X14 secretion protein HlyD YP_577322.1 2294281 R 323097 CDS YP_577323.1 92117594 4031240 complement(2295635..2297119) 1 NC_007964.1 RND efflux system, outer membrane lipoprotein, NodT 2297119 4031240 Nham_2066 Nitrobacter hamburgensis X14 RND efflux system, outer membrane lipoprotein, NodT YP_577323.1 2295635 R 323097 CDS YP_577324.1 92117595 4031241 2297711..2298751 1 NC_007964.1 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A 2298751 4031241 Nham_2067 Nitrobacter hamburgensis X14 cysteine synthase A YP_577324.1 2297711 D 323097 CDS YP_577325.1 92117596 4031242 complement(2298767..2299510) 1 NC_007964.1 ABC transporter 2299510 4031242 Nham_2068 Nitrobacter hamburgensis X14 ABC transporter YP_577325.1 2298767 R 323097 CDS YP_577326.1 92117597 4031243 complement(2299525..2301045) 1 NC_007964.1 amino acid ABC transporter permease 2301045 4031243 Nham_2069 Nitrobacter hamburgensis X14 amino acid ABC transporter permease YP_577326.1 2299525 R 323097 CDS YP_577327.1 92117598 4031244 complement(2301042..2302247) 1 NC_007964.1 amino acid ABC transporter permease 2302247 4031244 Nham_2070 Nitrobacter hamburgensis X14 amino acid ABC transporter permease YP_577327.1 2301042 R 323097 CDS YP_577328.1 92117599 4031245 complement(2302269..2303303) 1 NC_007964.1 extracellular solute-binding protein 2303303 4031245 Nham_2071 Nitrobacter hamburgensis X14 extracellular solute-binding protein YP_577328.1 2302269 R 323097 CDS YP_577329.1 92117600 4031246 2303646..2304842 1 NC_007964.1 cystathionine beta-lyase 2304842 4031246 Nham_2072 Nitrobacter hamburgensis X14 cystathionine beta-lyase YP_577329.1 2303646 D 323097 CDS YP_577330.1 92117601 4031247 2304981..2306672 1 NC_007964.1 Na/Pi cotransporter II-like protein 2306672 4031247 Nham_2073 Nitrobacter hamburgensis X14 Na/Pi cotransporter II-like protein YP_577330.1 2304981 D 323097 CDS YP_577331.1 92117602 4031248 complement(2306685..2307008) 1 NC_007964.1 lipid A biosynthesis-like 2307008 4031248 Nham_2074 Nitrobacter hamburgensis X14 lipid A biosynthesis-like YP_577331.1 2306685 R 323097 CDS YP_577332.1 92117603 4031249 complement(2307001..2307762) 1 NC_007964.1 glycosyl transferase family protein 2307762 4031249 Nham_2075 Nitrobacter hamburgensis X14 glycosyl transferase family protein YP_577332.1 2307001 R 323097 CDS YP_577333.1 92117604 4031250 complement(2308082..2309824) 1 NC_007964.1 glycosyl transferase family protein 2309824 4031250 Nham_2076 Nitrobacter hamburgensis X14 glycosyl transferase family protein YP_577333.1 2308082 R 323097 CDS YP_577334.1 92117605 4031251 complement(2309875..2311995) 1 NC_007964.1 penicillin-binding protein 1C 2311995 4031251 Nham_2077 Nitrobacter hamburgensis X14 penicillin-binding protein 1C YP_577334.1 2309875 R 323097 CDS YP_577335.1 92117606 4031252 complement(2311992..2317208) 1 NC_007964.1 alpha-2-macroglobulin-like 2317208 4031252 Nham_2078 Nitrobacter hamburgensis X14 alpha-2-macroglobulin-like YP_577335.1 2311992 R 323097 CDS YP_577336.1 92117607 4031254 complement(2317697..2318188) 1 NC_007964.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 2318188 4031254 Nham_2079 Nitrobacter hamburgensis X14 single-stranded DNA-binding protein YP_577336.1 2317697 R 323097 CDS YP_577337.1 92117608 4031255 2318586..2319341 1 NC_007964.1 outer-membrane protein precursor 2319341 4031255 Nham_2080 Nitrobacter hamburgensis X14 outer-membrane protein precursor YP_577337.1 2318586 D 323097 CDS YP_577338.1 92117609 4031256 2319642..2322683 1 NC_007964.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 2322683 uvrA 4031256 uvrA Nitrobacter hamburgensis X14 excinuclease ABC subunit A YP_577338.1 2319642 D 323097 CDS YP_577339.1 92117610 4031257 2323016..2323534 1 NC_007964.1 hypothetical protein 2323534 4031257 Nham_2082 Nitrobacter hamburgensis X14 hypothetical protein YP_577339.1 2323016 D 323097 CDS YP_577340.1 92117611 4030938 2323538..2323798 1 NC_007964.1 hypothetical protein 2323798 4030938 Nham_2083 Nitrobacter hamburgensis X14 hypothetical protein YP_577340.1 2323538 D 323097 CDS YP_577341.1 92117612 4030939 2324343..2328134 1 NC_007964.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 2328134 4030939 Nham_2084 Nitrobacter hamburgensis X14 ribonucleotide-diphosphate reductase subunit alpha YP_577341.1 2324343 D 323097 CDS YP_577342.1 92117613 4030940 2328306..2328962 1 NC_007964.1 hypothetical protein 2328962 4030940 Nham_2085 Nitrobacter hamburgensis X14 hypothetical protein YP_577342.1 2328306 D 323097 CDS YP_577343.1 92117614 4030941 2329047..2329922 1 NC_007964.1 hypothetical protein 2329922 4030941 Nham_2086 Nitrobacter hamburgensis X14 hypothetical protein YP_577343.1 2329047 D 323097 CDS YP_577344.1 92117615 4030942 2330317..2331039 1 NC_007964.1 hypothetical protein 2331039 4030942 Nham_2087 Nitrobacter hamburgensis X14 hypothetical protein YP_577344.1 2330317 D 323097 CDS YP_577345.1 92117616 4030943 2331046..2333295 1 NC_007964.1 hypothetical protein 2333295 4030943 Nham_2088 Nitrobacter hamburgensis X14 hypothetical protein YP_577345.1 2331046 D 323097 CDS YP_577346.1 92117617 4030944 2333292..2334362 1 NC_007964.1 hypothetical protein 2334362 4030944 Nham_2089 Nitrobacter hamburgensis X14 hypothetical protein YP_577346.1 2333292 D 323097 CDS YP_577347.1 92117618 4030945 2334359..2336215 1 NC_007964.1 hypothetical protein 2336215 4030945 Nham_2090 Nitrobacter hamburgensis X14 hypothetical protein YP_577347.1 2334359 D 323097 CDS YP_577348.1 92117619 4030946 2336238..2337020 1 NC_007964.1 hypothetical protein 2337020 4030946 Nham_2091 Nitrobacter hamburgensis X14 hypothetical protein YP_577348.1 2336238 D 323097 CDS YP_577349.1 92117620 4030947 2337081..2337830 1 NC_007964.1 hypothetical protein 2337830 4030947 Nham_2092 Nitrobacter hamburgensis X14 hypothetical protein YP_577349.1 2337081 D 323097 CDS YP_577350.1 92117621 4030948 complement(2338177..2338311) 1 NC_007964.1 hypothetical protein 2338311 4030948 Nham_2093 Nitrobacter hamburgensis X14 hypothetical protein YP_577350.1 2338177 R 323097 CDS YP_577351.1 92117622 4030949 2338357..2339139 1 NC_007964.1 hypothetical protein 2339139 4030949 Nham_2094 Nitrobacter hamburgensis X14 hypothetical protein YP_577351.1 2338357 D 323097 CDS YP_577352.1 92117623 4030950 2339452..2340588 1 NC_007964.1 hypothetical protein 2340588 4030950 Nham_2095 Nitrobacter hamburgensis X14 hypothetical protein YP_577352.1 2339452 D 323097 CDS YP_577353.1 92117624 4030951 complement(2340618..2341016) 1 NC_007964.1 hypothetical protein 2341016 4030951 Nham_2096 Nitrobacter hamburgensis X14 hypothetical protein YP_577353.1 2340618 R 323097 CDS YP_577354.1 92117625 4030952 complement(2341048..2341263) 1 NC_007964.1 hypothetical protein 2341263 4030952 Nham_2097 Nitrobacter hamburgensis X14 hypothetical protein YP_577354.1 2341048 R 323097 CDS YP_577355.1 92117626 4030953 complement(2341290..2341979) 1 NC_007964.1 polyphosphate glucokinase 2341979 4030953 Nham_2098 Nitrobacter hamburgensis X14 polyphosphate glucokinase YP_577355.1 2341290 R 323097 CDS YP_577356.1 92117627 4030954 2342140..2343012 1 NC_007964.1 YghU; B2989; one of eight glutathione transferase proteins from E. coli; glutathione S-transferase YghU 2343012 4030954 Nham_2099 Nitrobacter hamburgensis X14 glutathione S-transferase YghU YP_577356.1 2342140 D 323097 CDS YP_577357.1 92117628 4030955 2343059..2343739 1 NC_007964.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 2343739 fabG 4030955 fabG Nitrobacter hamburgensis X14 3-ketoacyl-ACP reductase YP_577357.1 2343059 D 323097 CDS YP_577358.1 92117629 4030956 2343884..2344426 1 NC_007964.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 2344426 4030956 Nham_2101 Nitrobacter hamburgensis X14 3-hydroxydecanoyl-ACP dehydratase YP_577358.1 2343884 D 323097 CDS YP_577359.1 92117630 4031932 2344464..2345138 1 NC_007964.1 hypothetical protein 2345138 4031932 Nham_2102 Nitrobacter hamburgensis X14 hypothetical protein YP_577359.1 2344464 D 323097 CDS YP_577360.1 92117631 4031933 2345456..2345755 1 NC_007964.1 hypothetical protein 2345755 4031933 Nham_2103 Nitrobacter hamburgensis X14 hypothetical protein YP_577360.1 2345456 D 323097 CDS YP_577361.1 92117632 4031934 2345845..2346090 1 NC_007964.1 hypothetical protein 2346090 4031934 Nham_2104 Nitrobacter hamburgensis X14 hypothetical protein YP_577361.1 2345845 D 323097 CDS YP_577362.1 92117633 4031935 complement(2346135..2346698) 1 NC_007964.1 CreA 2346698 4031935 Nham_2105 Nitrobacter hamburgensis X14 CreA YP_577362.1 2346135 R 323097 CDS YP_577363.1 92117634 4031936 2346904..2348415 1 NC_007964.1 hypothetical protein 2348415 4031936 Nham_2106 Nitrobacter hamburgensis X14 hypothetical protein YP_577363.1 2346904 D 323097 CDS YP_577364.1 92117635 4031937 2348547..2349479 1 NC_007964.1 polysaccharide deacetylase 2349479 4031937 Nham_2107 Nitrobacter hamburgensis X14 polysaccharide deacetylase YP_577364.1 2348547 D 323097 CDS YP_577365.1 92117636 4031938 2349503..2350054 1 NC_007964.1 hypothetical protein 2350054 4031938 Nham_2108 Nitrobacter hamburgensis X14 hypothetical protein YP_577365.1 2349503 D 323097 CDS YP_577366.1 92117637 4031939 complement(2350181..2350633) 1 NC_007964.1 DoxX protein 2350633 4031939 Nham_2109 Nitrobacter hamburgensis X14 DoxX protein YP_577366.1 2350181 R 323097 CDS YP_577367.1 92117638 4031940 complement(2350744..2353041) 1 NC_007964.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 2353041 4031940 Nham_2110 Nitrobacter hamburgensis X14 malic enzyme YP_577367.1 2350744 R 323097 CDS YP_577368.1 92117639 4031941 complement(2353144..2354916) 1 NC_007964.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 2354916 aspS 4031941 aspS Nitrobacter hamburgensis X14 aspartyl-tRNA synthetase YP_577368.1 2353144 R 323097 CDS YP_577369.1 92117640 4031942 2355097..2356287 1 NC_007964.1 ribonuclease D 2356287 4031942 Nham_2112 Nitrobacter hamburgensis X14 ribonuclease D YP_577369.1 2355097 D 323097 CDS YP_577370.1 92117641 4031943 complement(2356389..2357048) 1 NC_007964.1 ubiquinol-cytochrome c reductase, iron-sulfur subunit 2357048 4031943 Nham_2113 Nitrobacter hamburgensis X14 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_577370.1 2356389 R 323097 CDS YP_577371.1 92117642 4031944 complement(2357203..2358714) 1 NC_007964.1 Ppx/GppA phosphatase 2358714 4031944 Nham_2114 Nitrobacter hamburgensis X14 Ppx/GppA phosphatase YP_577371.1 2357203 R 323097 CDS YP_577372.1 92117643 4031945 complement(2358722..2360947) 1 NC_007964.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 2360947 4031945 Nham_2115 Nitrobacter hamburgensis X14 polyphosphate kinase YP_577372.1 2358722 R 323097 CDS YP_577373.1 92117644 4031946 complement(2361063..2361743) 1 NC_007964.1 hypothetical protein 2361743 4031946 Nham_2116 Nitrobacter hamburgensis X14 hypothetical protein YP_577373.1 2361063 R 323097 CDS YP_577374.1 92117645 4031947 complement(2361795..2362337) 1 NC_007964.1 CDP-alcohol phosphatidyltransferase 2362337 4031947 Nham_2117 Nitrobacter hamburgensis X14 CDP-alcohol phosphatidyltransferase YP_577374.1 2361795 R 323097 CDS YP_577375.1 92117646 4031948 2362510..2363580 1 NC_007964.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 2363580 4031948 Nham_2118 Nitrobacter hamburgensis X14 phosphoribosylaminoimidazole synthetase YP_577375.1 2362510 D 323097 CDS YP_577376.1 92117647 4031949 2363591..2364241 1 NC_007964.1 phosphoribosylglycinamide formyltransferase 2364241 4031949 Nham_2119 Nitrobacter hamburgensis X14 phosphoribosylglycinamide formyltransferase YP_577376.1 2363591 D 323097 CDS YP_577377.1 92117648 4031950 complement(2364335..2364538) 1 NC_007964.1 cold-shock DNA-binding domain-containing protein 2364538 4031950 Nham_2120 Nitrobacter hamburgensis X14 cold-shock DNA-binding domain-containing protein YP_577377.1 2364335 R 323097 CDS YP_577378.1 92117649 4031951 complement(2364898..2365719) 1 NC_007964.1 hypothetical protein 2365719 4031951 Nham_2121 Nitrobacter hamburgensis X14 hypothetical protein YP_577378.1 2364898 R 323097 CDS YP_577379.1 92117650 4031052 complement(2365906..2366328) 1 NC_007964.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 2366328 ndk 4031052 ndk Nitrobacter hamburgensis X14 nucleoside diphosphate kinase YP_577379.1 2365906 R 323097 CDS YP_577380.1 92117651 4031053 2366627..2366974 1 NC_007964.1 hypothetical protein 2366974 4031053 Nham_2123 Nitrobacter hamburgensis X14 hypothetical protein YP_577380.1 2366627 D 323097 CDS YP_577381.1 92117652 4031054 complement(2367133..2369133) 1 NC_007964.1 carbamoyl-phosphate synthase subunit L 2369133 4031054 Nham_2124 Nitrobacter hamburgensis X14 carbamoyl-phosphate synthase subunit L YP_577381.1 2367133 R 323097 CDS YP_577382.1 92117653 4031055 complement(2369136..2370779) 1 NC_007964.1 propionyl-CoA carboxylase 2370779 4031055 Nham_2125 Nitrobacter hamburgensis X14 propionyl-CoA carboxylase YP_577382.1 2369136 R 323097 CDS YP_577383.1 92117654 4031056 complement(2371054..2371362) 1 NC_007964.1 ETC complex I subunit region 2371362 4031056 Nham_2126 Nitrobacter hamburgensis X14 ETC complex I subunit region YP_577383.1 2371054 R 323097 CDS YP_577384.1 92117655 4031057 complement(2371568..2373379) 1 NC_007964.1 carbamoyltransferase 2373379 4031057 Nham_2127 Nitrobacter hamburgensis X14 carbamoyltransferase YP_577384.1 2371568 R 323097 CDS YP_577385.1 92117656 4031058 2373449..2374180 1 NC_007964.1 hypothetical protein 2374180 4031058 Nham_2128 Nitrobacter hamburgensis X14 hypothetical protein YP_577385.1 2373449 D 323097 CDS YP_577386.1 92117657 4031059 complement(2374499..2374918) 1 NC_007964.1 hypothetical protein 2374918 4031059 Nham_2129 Nitrobacter hamburgensis X14 hypothetical protein YP_577386.1 2374499 R 323097 CDS YP_577387.1 92117658 4031060 2375272..2376963 1 NC_007964.1 phage integrase 2376963 4031060 Nham_2130 Nitrobacter hamburgensis X14 phage integrase YP_577387.1 2375272 D 323097 CDS YP_577388.1 92117659 4031061 complement(2376966..2377505) 1 NC_007964.1 hypothetical protein 2377505 4031061 Nham_2131 Nitrobacter hamburgensis X14 hypothetical protein YP_577388.1 2376966 R 323097 CDS YP_577389.1 92117660 4031062 complement(2377533..2377967) 1 NC_007964.1 hypothetical protein 2377967 4031062 Nham_2132 Nitrobacter hamburgensis X14 hypothetical protein YP_577389.1 2377533 R 323097 CDS YP_577390.1 92117661 4031063 complement(2378523..2378849) 1 NC_007964.1 hypothetical protein 2378849 4031063 Nham_2133 Nitrobacter hamburgensis X14 hypothetical protein YP_577390.1 2378523 R 323097 CDS YP_577391.1 92117662 4031064 complement(2378877..2379224) 1 NC_007964.1 hypothetical protein 2379224 4031064 Nham_2134 Nitrobacter hamburgensis X14 hypothetical protein YP_577391.1 2378877 R 323097 CDS YP_577392.1 92117663 4031065 complement(2379339..2379677) 1 NC_007964.1 transposase 2379677 4031065 Nham_2135 Nitrobacter hamburgensis X14 transposase YP_577392.1 2379339 R 323097 CDS YP_577393.1 92117664 4031066 complement(2379725..2380093) 1 NC_007964.1 IS5 family transposase OrfA 2380093 4031066 Nham_2136 Nitrobacter hamburgensis X14 IS5 family transposase OrfA YP_577393.1 2379725 R 323097 CDS YP_577394.1 92117665 4031067 complement(2380122..2380376) 1 NC_007964.1 hypothetical protein 2380376 4031067 Nham_2137 Nitrobacter hamburgensis X14 hypothetical protein YP_577394.1 2380122 R 323097 CDS YP_577395.1 92117666 4031068 complement(2380404..2381267) 1 NC_007964.1 hypothetical protein 2381267 4031068 Nham_2138 Nitrobacter hamburgensis X14 hypothetical protein YP_577395.1 2380404 R 323097 CDS YP_577396.1 92117667 4031070 complement(2381960..2382388) 1 NC_007964.1 hypothetical protein 2382388 4031070 Nham_2140 Nitrobacter hamburgensis X14 hypothetical protein YP_577396.1 2381960 R 323097 CDS YP_577397.1 92117668 4030209 complement(2382964..2383521) 1 NC_007964.1 hypothetical protein 2383521 4030209 Nham_2141 Nitrobacter hamburgensis X14 hypothetical protein YP_577397.1 2382964 R 323097 CDS YP_577398.1 92117669 4030210 complement(2383624..2384277) 1 NC_007964.1 cold-shock DNA-binding domain-containing protein 2384277 4030210 Nham_2142 Nitrobacter hamburgensis X14 cold-shock DNA-binding domain-containing protein YP_577398.1 2383624 R 323097 CDS YP_577399.1 92117670 4030211 complement(2384363..2384614) 1 NC_007964.1 hypothetical protein 2384614 4030211 Nham_2143 Nitrobacter hamburgensis X14 hypothetical protein YP_577399.1 2384363 R 323097 CDS YP_577400.1 92117671 4030212 complement(2384968..2385321) 1 NC_007964.1 hypothetical protein 2385321 4030212 Nham_2144 Nitrobacter hamburgensis X14 hypothetical protein YP_577400.1 2384968 R 323097 CDS YP_577401.1 92117672 4030213 2385506..2385955 1 NC_007964.1 glyoxalase/bleomycin resistance protein/dioxygenase 2385955 4030213 Nham_2145 Nitrobacter hamburgensis X14 glyoxalase/bleomycin resistance protein/dioxygenase YP_577401.1 2385506 D 323097 CDS YP_577402.1 92117673 4030214 2386306..2386737 1 NC_007964.1 hypothetical protein 2386737 4030214 Nham_2146 Nitrobacter hamburgensis X14 hypothetical protein YP_577402.1 2386306 D 323097 CDS YP_577403.1 92117674 4030216 complement(2387381..2387587) 1 NC_007964.1 cold-shock DNA-binding domain-containing protein 2387587 4030216 Nham_2147 Nitrobacter hamburgensis X14 cold-shock DNA-binding domain-containing protein YP_577403.1 2387381 R 323097 CDS YP_577404.1 92117675 4030217 complement(2387587..2388660) 1 NC_007964.1 hypothetical protein 2388660 4030217 Nham_2148 Nitrobacter hamburgensis X14 hypothetical protein YP_577404.1 2387587 R 323097 CDS YP_577405.1 92117676 4030218 complement(2388660..2389190) 1 NC_007964.1 hypothetical protein 2389190 4030218 Nham_2149 Nitrobacter hamburgensis X14 hypothetical protein YP_577405.1 2388660 R 323097 CDS YP_577406.1 92117677 4030219 complement(2389192..2389893) 1 NC_007964.1 peptidase U35, phage prohead HK97 2389893 4030219 Nham_2150 Nitrobacter hamburgensis X14 peptidase U35, phage prohead HK97 YP_577406.1 2389192 R 323097 CDS YP_577407.1 92117678 4030220 complement(2389893..2391089) 1 NC_007964.1 hypothetical protein 2391089 4030220 Nham_2151 Nitrobacter hamburgensis X14 hypothetical protein YP_577407.1 2389893 R 323097 CDS YP_577408.1 92117679 4030222 complement(2391462..2392976) 1 NC_007964.1 phage terminase 2392976 4030222 Nham_2153 Nitrobacter hamburgensis X14 phage terminase YP_577408.1 2391462 R 323097 CDS YP_577409.1 92117680 4030223 complement(2393083..2393436) 1 NC_007964.1 hypothetical protein 2393436 4030223 Nham_2154 Nitrobacter hamburgensis X14 hypothetical protein YP_577409.1 2393083 R 323097 CDS YP_577410.1 92117681 4030224 complement(2393624..2395711) 1 NC_007964.1 virulence-associated E 2395711 4030224 Nham_2155 Nitrobacter hamburgensis X14 virulence-associated E YP_577410.1 2393624 R 323097 CDS YP_577411.1 92117682 4030225 complement(2395951..2396136) 1 NC_007964.1 transcriptional regulator 2396136 4030225 Nham_2156 Nitrobacter hamburgensis X14 transcriptional regulator YP_577411.1 2395951 R 323097 CDS YP_577412.1 92117683 4029522 complement(2396352..2397443) 1 NC_007964.1 phage integrase 2397443 4029522 Nham_2157 Nitrobacter hamburgensis X14 phage integrase YP_577412.1 2396352 R 323097 CDS YP_577413.1 92117684 4029523 2398403..2398612 1 NC_007964.1 hypothetical protein 2398612 4029523 Nham_2158 Nitrobacter hamburgensis X14 hypothetical protein YP_577413.1 2398403 D 323097 CDS YP_577414.1 92117685 4029524 2398684..2398956 1 NC_007964.1 hypothetical protein 2398956 4029524 Nham_2159 Nitrobacter hamburgensis X14 hypothetical protein YP_577414.1 2398684 D 323097 CDS YP_577415.1 92117686 4029525 complement(2400021..2401130) 1 NC_007964.1 transposase, IS4 2401130 4029525 Nham_2160 Nitrobacter hamburgensis X14 transposase, IS4 YP_577415.1 2400021 R 323097 CDS YP_577416.1 92117687 4029526 complement(2401239..2401934) 1 NC_007964.1 PA-phosphatase-like phosphoesterase 2401934 4029526 Nham_2161 Nitrobacter hamburgensis X14 PA-phosphatase-like phosphoesterase YP_577416.1 2401239 R 323097 CDS YP_577417.1 92117688 4029528 complement(2402682..2402945) 1 NC_007964.1 hypothetical protein 2402945 4029528 Nham_2162 Nitrobacter hamburgensis X14 hypothetical protein YP_577417.1 2402682 R 323097 CDS YP_577418.1 92117689 4029529 2402988..2403713 1 NC_007964.1 lipoyl-[acyl-carrier protein]-protein-N-lipoyltransferse; lipoate-protein ligase B; transfers lipoate to apolipoproteins; involved in lipoate metabolism; lipoyltransferase 2403713 lipB 4029529 lipB Nitrobacter hamburgensis X14 lipoyltransferase YP_577418.1 2402988 D 323097 CDS YP_577419.1 92117690 4029530 complement(2403894..2404193) 1 NC_007964.1 catalyzes the hydrolysis of acylphosphate; acylphosphatase 2404193 4029530 Nham_2164 Nitrobacter hamburgensis X14 acylphosphatase YP_577419.1 2403894 R 323097 CDS YP_577420.1 92117691 4029531 complement(2404267..2406282) 1 NC_007964.1 carbamoyl-phosphate synthase subunit L 2406282 4029531 Nham_2165 Nitrobacter hamburgensis X14 carbamoyl-phosphate synthase subunit L YP_577420.1 2404267 R 323097 CDS YP_577421.1 92117692 4029532 complement(2406599..2407171) 1 NC_007964.1 hypothetical protein 2407171 4029532 Nham_2166 Nitrobacter hamburgensis X14 hypothetical protein YP_577421.1 2406599 R 323097 CDS YP_577422.1 92117693 4029533 2407559..2408218 1 NC_007964.1 peroxidase 2408218 4029533 Nham_2167 Nitrobacter hamburgensis X14 peroxidase YP_577422.1 2407559 D 323097 CDS YP_577423.1 92117694 4029534 2408659..2409786 1 NC_007964.1 zinc-binding alcohol dehydrogenase 2409786 4029534 Nham_2168 Nitrobacter hamburgensis X14 zinc-binding alcohol dehydrogenase YP_577423.1 2408659 D 323097 CDS YP_577424.1 92117695 4029535 complement(2409858..2412128) 1 NC_007964.1 adenylate/guanylate cyclase 2412128 4029535 Nham_2169 Nitrobacter hamburgensis X14 adenylate/guanylate cyclase YP_577424.1 2409858 R 323097 CDS YP_577425.1 92117696 4029536 complement(2412606..2413946) 1 NC_007964.1 tetratricopeptide TPR_2 2413946 4029536 Nham_2170 Nitrobacter hamburgensis X14 tetratricopeptide TPR_2 YP_577425.1 2412606 R 323097 CDS YP_577426.1 92117697 4029538 2414715..2415080 1 NC_007964.1 PRC-barrel protein 2415080 4029538 Nham_2171 Nitrobacter hamburgensis X14 PRC-barrel protein YP_577426.1 2414715 D 323097 CDS YP_577427.1 92117698 4032669 complement(2415905..2416693) 1 NC_007964.1 nodulate formation efficiency C protein 2416693 4032669 Nham_2173 Nitrobacter hamburgensis X14 nodulate formation efficiency C protein YP_577427.1 2415905 R 323097 CDS YP_577428.1 92117699 4032671 2418932..2419417 1 NC_007964.1 hypothetical protein 2419417 4032671 Nham_2175 Nitrobacter hamburgensis X14 hypothetical protein YP_577428.1 2418932 D 323097 CDS YP_577429.1 92117700 4032672 2419678..2420028 1 NC_007964.1 hypothetical protein 2420028 4032672 Nham_2176 Nitrobacter hamburgensis X14 hypothetical protein YP_577429.1 2419678 D 323097 CDS YP_577430.1 92117701 4032673 complement(2420128..2422785) 1 NC_007964.1 multi-sensor signal transduction histidine kinase 2422785 4032673 Nham_2177 Nitrobacter hamburgensis X14 multi-sensor signal transduction histidine kinase YP_577430.1 2420128 R 323097 CDS YP_577431.1 92117702 4032674 complement(2422948..2426442) 1 NC_007964.1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 2426442 4032674 Nham_2178 Nitrobacter hamburgensis X14 indolepyruvate ferredoxin oxidoreductase YP_577431.1 2422948 R 323097 CDS YP_577432.1 92117703 4032675 2426719..2427123 1 NC_007964.1 hypothetical protein 2427123 4032675 Nham_2179 Nitrobacter hamburgensis X14 hypothetical protein YP_577432.1 2426719 D 323097 CDS YP_577433.1 92117704 4032676 complement(2427194..2428009) 1 NC_007964.1 hypothetical protein 2428009 4032676 Nham_2180 Nitrobacter hamburgensis X14 hypothetical protein YP_577433.1 2427194 R 323097 CDS YP_577434.1 92117705 4032677 2428261..2428557 1 NC_007964.1 hypothetical protein 2428557 4032677 Nham_2181 Nitrobacter hamburgensis X14 hypothetical protein YP_577434.1 2428261 D 323097 CDS YP_577435.1 92117706 4032678 complement(2428889..2431009) 1 NC_007964.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 2431009 hppA 4032678 hppA Nitrobacter hamburgensis X14 membrane-bound proton-translocating pyrophosphatase YP_577435.1 2428889 R 323097 CDS YP_577436.1 92117707 4032679 complement(2431365..2432552) 1 NC_007964.1 class I and II aminotransferase 2432552 4032679 Nham_2183 Nitrobacter hamburgensis X14 class I and II aminotransferase YP_577436.1 2431365 R 323097 CDS YP_577437.1 92117708 4032680 2432656..2434077 1 NC_007964.1 peptidase M48, Ste24p 2434077 4032680 Nham_2184 Nitrobacter hamburgensis X14 peptidase M48, Ste24p YP_577437.1 2432656 D 323097 CDS YP_577438.1 92117709 4032681 2434121..2434888 1 NC_007964.1 DSBA oxidoreductase 2434888 4032681 Nham_2185 Nitrobacter hamburgensis X14 DSBA oxidoreductase YP_577438.1 2434121 D 323097 CDS YP_577439.1 92117710 4032683 2435440..2435910 1 NC_007964.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 2435910 4032683 Nham_2187 Nitrobacter hamburgensis X14 3-dehydroquinate dehydratase YP_577439.1 2435440 D 323097 CDS YP_577440.1 92117711 4032684 2435953..2436441 1 NC_007964.1 acetyl-CoA carboxylase, biotin carboxyl carrier protein 2436441 4032684 Nham_2188 Nitrobacter hamburgensis X14 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_577440.1 2435953 D 323097 CDS YP_577441.1 92117712 4032685 2436467..2437822 1 NC_007964.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 2437822 4032685 Nham_2189 Nitrobacter hamburgensis X14 acetyl-CoA carboxylase biotin carboxylase subunit YP_577441.1 2436467 D 323097 CDS YP_577442.1 92117713 4032686 2437900..2439498 1 NC_007964.1 multi-sensor signal transduction histidine kinase 2439498 4032686 Nham_2190 Nitrobacter hamburgensis X14 multi-sensor signal transduction histidine kinase YP_577442.1 2437900 D 323097 CDS YP_577443.1 92117714 4032687 2439495..2439935 1 NC_007964.1 response regulator receiver domain-containing protein 2439935 4032687 Nham_2191 Nitrobacter hamburgensis X14 response regulator receiver domain-containing protein YP_577443.1 2439495 D 323097 CDS YP_577444.1 92117715 4032029 2439932..2441020 1 NC_007964.1 signal transduction histidine kinase 2441020 4032029 Nham_2192 Nitrobacter hamburgensis X14 signal transduction histidine kinase YP_577444.1 2439932 D 323097 CDS YP_577445.1 92117716 4032030 2441214..2441891 1 NC_007964.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 2441891 aat 4032030 aat Nitrobacter hamburgensis X14 leucyl/phenylalanyl-tRNA--protein transferase YP_577445.1 2441214 D 323097 CDS YP_577446.1 92117717 4032031 2442128..2442382 1 NC_007964.1 hypothetical protein 2442382 4032031 Nham_2194 Nitrobacter hamburgensis X14 hypothetical protein YP_577446.1 2442128 D 323097 CDS YP_577447.1 92117718 4032032 complement(2442531..2443229) 1 NC_007964.1 ABC transporter 2443229 4032032 Nham_2195 Nitrobacter hamburgensis X14 ABC transporter YP_577447.1 2442531 R 323097 CDS YP_577448.1 92117719 4032033 complement(2443239..2444519) 1 NC_007964.1 LolC/E family lipoprotein releasing system, transmembrane protein 2444519 4032033 Nham_2196 Nitrobacter hamburgensis X14 LolC/E family lipoprotein releasing system, transmembrane protein YP_577448.1 2443239 R 323097 CDS YP_577449.1 92117720 4032034 complement(2444593..2445912) 1 NC_007964.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 2445912 4032034 Nham_2197 Nitrobacter hamburgensis X14 prolyl-tRNA synthetase YP_577449.1 2444593 R 323097 CDS YP_577450.1 92117721 4032035 complement(2446088..2447647) 1 NC_007964.1 copper resistance D 2447647 4032035 Nham_2198 Nitrobacter hamburgensis X14 copper resistance D YP_577450.1 2446088 R 323097 CDS YP_577451.1 92117722 4032036 complement(2447682..2448215) 1 NC_007964.1 nuclear export factor GLE1 2448215 4032036 Nham_2199 Nitrobacter hamburgensis X14 nuclear export factor GLE1 YP_577451.1 2447682 R 323097 CDS YP_577452.1 92117723 4032037 complement(2448212..2448742) 1 NC_007964.1 hypothetical protein 2448742 4032037 Nham_2200 Nitrobacter hamburgensis X14 hypothetical protein YP_577452.1 2448212 R 323097 CDS YP_577453.1 92117724 4032038 complement(2448831..2451041) 1 NC_007964.1 TonB-dependent receptor 2451041 4032038 Nham_2201 Nitrobacter hamburgensis X14 TonB-dependent receptor YP_577453.1 2448831 R 323097 CDS YP_577454.1 92117725 4032039 complement(2451134..2451508) 1 NC_007964.1 hypothetical protein 2451508 4032039 Nham_2202 Nitrobacter hamburgensis X14 hypothetical protein YP_577454.1 2451134 R 323097 CDS YP_577455.1 92117726 4032040 complement(2452077..2452352) 1 NC_007964.1 hypothetical protein 2452352 4032040 Nham_2203 Nitrobacter hamburgensis X14 hypothetical protein YP_577455.1 2452077 R 323097 CDS YP_577456.1 92117727 4032041 complement(2452352..2452756) 1 NC_007964.1 glyoxalase/bleomycin resistance protein/dioxygenase 2452756 4032041 Nham_2204 Nitrobacter hamburgensis X14 glyoxalase/bleomycin resistance protein/dioxygenase YP_577456.1 2452352 R 323097 CDS YP_577457.1 92117728 4032042 complement(2452870..2454543) 1 NC_007964.1 beta-lactamase-like 2454543 4032042 Nham_2205 Nitrobacter hamburgensis X14 beta-lactamase-like YP_577457.1 2452870 R 323097 CDS YP_577458.1 92117729 4032043 complement(2454540..2455352) 1 NC_007964.1 biotin--acetyl-CoA-carboxylase ligase 2455352 4032043 Nham_2206 Nitrobacter hamburgensis X14 biotin--acetyl-CoA-carboxylase ligase YP_577458.1 2454540 R 323097 CDS YP_577459.1 92117730 4032044 complement(2455367..2456803) 1 NC_007964.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 2456803 4032044 Nham_2207 Nitrobacter hamburgensis X14 NADH dehydrogenase subunit N YP_577459.1 2455367 R 323097 CDS YP_577460.1 92117731 4032045 complement(2456829..2458337) 1 NC_007964.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 2458337 4032045 Nham_2208 Nitrobacter hamburgensis X14 NADH dehydrogenase subunit M YP_577460.1 2456829 R 323097 CDS YP_577461.1 92117732 4032046 complement(2458339..2460390) 1 NC_007964.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 2460390 4032046 Nham_2209 Nitrobacter hamburgensis X14 NADH dehydrogenase subunit L YP_577461.1 2458339 R 323097 CDS YP_577462.1 92117733 4032047 complement(2460474..2460782) 1 NC_007964.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 2460782 4032047 Nham_2210 Nitrobacter hamburgensis X14 NADH dehydrogenase subunit K YP_577462.1 2460474 R 323097 CDS YP_577463.1 92117734 4030419 complement(2460779..2461417) 1 NC_007964.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 2461417 4030419 Nham_2211 Nitrobacter hamburgensis X14 NADH dehydrogenase subunit J YP_577463.1 2460779 R 323097 CDS YP_577464.1 92117735 4030420 complement(2461511..2461999) 1 NC_007964.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 2461999 4030420 Nham_2212 Nitrobacter hamburgensis X14 NADH dehydrogenase subunit I YP_577464.1 2461511 R 323097 CDS YP_577465.1 92117736 4030421 complement(2462007..2463077) 1 NC_007964.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 2463077 4030421 Nham_2213 Nitrobacter hamburgensis X14 NADH dehydrogenase subunit H YP_577465.1 2462007 R 323097 CDS YP_577466.1 92117737 4030422 complement(2463083..2465158) 1 NC_007964.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 2465158 4030422 Nham_2214 Nitrobacter hamburgensis X14 NADH dehydrogenase subunit G YP_577466.1 2463083 R 323097 CDS YP_577467.1 92117738 4030423 complement(2465163..2466488) 1 NC_007964.1 part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 2466488 4030423 Nham_2215 Nitrobacter hamburgensis X14 NADH dehydrogenase I subunit F YP_577467.1 2465163 R 323097 CDS YP_577468.1 92117739 4030424 complement(2466488..2467174) 1 NC_007964.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 2467174 4030424 Nham_2216 Nitrobacter hamburgensis X14 NADH dehydrogenase subunit E YP_577468.1 2466488 R 323097 CDS YP_577469.1 92117740 4030425 complement(2467189..2468154) 1 NC_007964.1 methyltransferase FkbM 2468154 4030425 Nham_2217 Nitrobacter hamburgensis X14 methyltransferase FkbM YP_577469.1 2467189 R 323097 CDS YP_577470.1 92117741 4030426 complement(2468151..2469359) 1 NC_007964.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 2469359 4030426 Nham_2218 Nitrobacter hamburgensis X14 NADH dehydrogenase subunit D YP_577470.1 2468151 R 323097 CDS YP_577471.1 92117742 4030427 complement(2469359..2469979) 1 NC_007964.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 2469979 4030427 Nham_2219 Nitrobacter hamburgensis X14 NADH dehydrogenase subunit C YP_577471.1 2469359 R 323097 CDS YP_577472.1 92117743 4030428 complement(2469992..2470600) 1 NC_007964.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 2470600 4030428 Nham_2220 Nitrobacter hamburgensis X14 NADH dehydrogenase subunit B YP_577472.1 2469992 R 323097 CDS YP_577473.1 92117744 4030429 complement(2470597..2470962) 1 NC_007964.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 2470962 4030429 Nham_2221 Nitrobacter hamburgensis X14 NADH dehydrogenase subunit A YP_577473.1 2470597 R 323097 CDS YP_577474.1 92117745 4030430 2471291..2471485 1 NC_007964.1 hypothetical protein 2471485 4030430 Nham_2222 Nitrobacter hamburgensis X14 hypothetical protein YP_577474.1 2471291 D 323097 CDS YP_577475.1 92117746 4030432 2471900..2472199 1 NC_007964.1 histone-like DNA-binding protein 2472199 4030432 Nham_2223 Nitrobacter hamburgensis X14 histone-like DNA-binding protein YP_577475.1 2471900 D 323097 CDS YP_577476.1 92117747 4030433 2472351..2473604 1 NC_007964.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 2473604 4030433 Nham_2224 Nitrobacter hamburgensis X14 peptidase T YP_577476.1 2472351 D 323097 CDS YP_577477.1 92117748 4030434 2473718..2474038 1 NC_007964.1 hypothetical protein 2474038 4030434 Nham_2225 Nitrobacter hamburgensis X14 hypothetical protein YP_577477.1 2473718 D 323097 CDS YP_577478.1 92117749 4030435 complement(2474056..2474913) 1 NC_007964.1 methyltransferase type 11 2474913 4030435 Nham_2226 Nitrobacter hamburgensis X14 methyltransferase type 11 YP_577478.1 2474056 R 323097 CDS YP_577479.1 92117750 4030018 complement(2475907..2478330) 1 NC_007964.1 ATP-dependent protease La 2478330 4030018 Nham_2227 Nitrobacter hamburgensis X14 ATP-dependent protease La YP_577479.1 2475907 R 323097 CDS YP_577480.1 92117751 4030019 complement(2478647..2479921) 1 NC_007964.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 2479921 clpX 4030019 clpX Nitrobacter hamburgensis X14 ATP-dependent protease ATP-binding subunit ClpX YP_577480.1 2478647 R 323097 CDS YP_577481.1 92117752 4030020 complement(2480347..2480982) 1 NC_007964.1 endopeptidase Clp 2480982 4030020 Nham_2229 Nitrobacter hamburgensis X14 endopeptidase Clp YP_577481.1 2480347 R 323097 CDS YP_577482.1 92117753 4030021 complement(2481316..2482677) 1 NC_007964.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 2482677 tig 4030021 tig Nitrobacter hamburgensis X14 trigger factor YP_577482.1 2481316 R 323097 CDS YP_577483.1 92117754 4030023 2483162..2484502 1 NC_007964.1 twin-arginine translocation pathway signal 2484502 4030023 Nham_2231 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_577483.1 2483162 D 323097 CDS YP_577484.1 92117755 4030024 complement(2484517..2486016) 1 NC_007964.1 hypothetical protein 2486016 4030024 Nham_2232 Nitrobacter hamburgensis X14 hypothetical protein YP_577484.1 2484517 R 323097 CDS YP_577485.1 92117756 4030025 2486373..2486711 1 NC_007964.1 nitrogen regulatory protein P-II 2486711 4030025 Nham_2233 Nitrobacter hamburgensis X14 nitrogen regulatory protein P-II YP_577485.1 2486373 D 323097 CDS YP_577486.1 92117757 4030026 2486802..2488211 1 NC_007964.1 glutamine synthetase, type I 2488211 4030026 Nham_2234 Nitrobacter hamburgensis X14 glutamine synthetase, type I YP_577486.1 2486802 D 323097 CDS YP_577487.1 92117758 4030027 2488450..2489637 1 NC_007964.1 hypothetical protein 2489637 4030027 Nham_2235 Nitrobacter hamburgensis X14 hypothetical protein YP_577487.1 2488450 D 323097 CDS YP_577488.1 92117759 4030028 complement(2489738..2490034) 1 NC_007964.1 antibiotic biosynthesis monooxygenase 2490034 4030028 Nham_2236 Nitrobacter hamburgensis X14 antibiotic biosynthesis monooxygenase YP_577488.1 2489738 R 323097 CDS YP_577489.1 92117760 4030029 complement(2490360..2490908) 1 NC_007964.1 hypothetical protein 2490908 4030029 Nham_2237 Nitrobacter hamburgensis X14 hypothetical protein YP_577489.1 2490360 R 323097 CDS YP_577490.1 92117761 4030030 complement(2491199..2491711) 1 NC_007964.1 MarR family transcriptional regulator 2491711 4030030 Nham_2238 Nitrobacter hamburgensis X14 MarR family transcriptional regulator YP_577490.1 2491199 R 323097 CDS YP_577491.1 92117762 4030031 complement(2492171..2492635) 1 NC_007964.1 hypothetical protein 2492635 4030031 Nham_2239 Nitrobacter hamburgensis X14 hypothetical protein YP_577491.1 2492171 R 323097 CDS YP_577492.1 92117763 4030032 2492733..2493869 1 NC_007964.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 2493869 4030032 Nham_2240 Nitrobacter hamburgensis X14 delta-aminolevulinic acid dehydratase YP_577492.1 2492733 D 323097 CDS YP_577493.1 92117764 4030033 2493999..2494538 1 NC_007964.1 hypothetical protein 2494538 4030033 Nham_2241 Nitrobacter hamburgensis X14 hypothetical protein YP_577493.1 2493999 D 323097 CDS YP_577494.1 92117765 4030034 2494728..2495501 1 NC_007964.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 2495501 4030034 Nham_2242 Nitrobacter hamburgensis X14 arginyl-tRNA-protein transferase YP_577494.1 2494728 D 323097 CDS YP_577495.1 92117766 4030035 complement(2495633..2497027) 1 NC_007964.1 manganese transport protein MntH 2497027 4030035 Nham_2243 Nitrobacter hamburgensis X14 manganese transport protein MntH YP_577495.1 2495633 R 323097 CDS YP_577496.1 92117767 4033167 complement(2497254..2497652) 1 NC_007964.1 arsenate reductase 2497652 4033167 Nham_2244 Nitrobacter hamburgensis X14 arsenate reductase YP_577496.1 2497254 R 323097 CDS YP_577497.1 92117768 4033168 complement(2497649..2498347) 1 NC_007964.1 major intrinsic protein 2498347 4033168 Nham_2245 Nitrobacter hamburgensis X14 major intrinsic protein YP_577497.1 2497649 R 323097 CDS YP_577498.1 92117769 4033169 complement(2498503..2498850) 1 NC_007964.1 ArsR family transcriptional regulator 2498850 4033169 Nham_2246 Nitrobacter hamburgensis X14 ArsR family transcriptional regulator YP_577498.1 2498503 R 323097 CDS YP_577499.1 92117770 4033170 complement(2499044..2501293) 1 NC_007964.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 2501293 4033170 Nham_2247 Nitrobacter hamburgensis X14 DNA topoisomerase IV subunit A YP_577499.1 2499044 R 323097 CDS YP_577500.1 92117771 4033171 complement(2501519..2502280) 1 NC_007964.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 2502280 recO 4033171 recO Nitrobacter hamburgensis X14 DNA repair protein RecO YP_577500.1 2501519 R 323097 CDS YP_577501.1 92117772 4033172 complement(2502324..2502701) 1 NC_007964.1 hypothetical protein 2502701 4033172 Nham_2249 Nitrobacter hamburgensis X14 hypothetical protein YP_577501.1 2502324 R 323097 CDS YP_577502.1 92117773 4033173 complement(2502715..2503632) 1 NC_007964.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 2503632 era 4033173 era Nitrobacter hamburgensis X14 GTP-binding protein Era YP_577502.1 2502715 R 323097 CDS YP_577503.1 92117774 4033174 complement(2503629..2504429) 1 NC_007964.1 ribonuclease III 2504429 4033174 Nham_2251 Nitrobacter hamburgensis X14 ribonuclease III YP_577503.1 2503629 R 323097 CDS YP_577504.1 92117775 4033175 complement(2504426..2505184) 1 NC_007964.1 peptidase S26A, signal peptidase I 2505184 4033175 Nham_2252 Nitrobacter hamburgensis X14 peptidase S26A, signal peptidase I YP_577504.1 2504426 R 323097 CDS YP_577505.1 92117776 4033176 complement(2505629..2506048) 1 NC_007964.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 2506048 acpS 4033176 acpS Nitrobacter hamburgensis X14 4'-phosphopantetheinyl transferase YP_577505.1 2505629 R 323097 CDS YP_577506.1 92117777 4033177 complement(2506045..2506815) 1 NC_007964.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 2506815 4033177 Nham_2254 Nitrobacter hamburgensis X14 pyridoxine 5'-phosphate synthase YP_577506.1 2506045 R 323097 CDS YP_577507.1 92117778 4033178 complement(2506902..2509211) 1 NC_007964.1 (p)ppGpp synthetase SpoT/RelA 2509211 4033178 Nham_2255 Nitrobacter hamburgensis X14 (p)ppGpp synthetase SpoT/RelA YP_577507.1 2506902 R 323097 CDS YP_577508.1 92117779 4033179 complement(2509442..2509834) 1 NC_007964.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 2509834 4033179 Nham_2256 Nitrobacter hamburgensis X14 DNA-directed RNA polymerase subunit omega YP_577508.1 2509442 R 323097 CDS YP_577509.1 92117780 4033180 2510165..2510785 1 NC_007964.1 hypothetical protein 2510785 4033180 Nham_2257 Nitrobacter hamburgensis X14 hypothetical protein YP_577509.1 2510165 D 323097 CDS YP_577510.1 92117781 4033181 2510763..2511491 1 NC_007964.1 uracil-DNA glycosylase superfamily protein 2511491 4033181 Nham_2258 Nitrobacter hamburgensis X14 uracil-DNA glycosylase superfamily protein YP_577510.1 2510763 D 323097 CDS YP_577511.1 92117782 4033182 complement(2511569..2511883) 1 NC_007964.1 hypothetical protein 2511883 4033182 Nham_2259 Nitrobacter hamburgensis X14 hypothetical protein YP_577511.1 2511569 R 323097 CDS YP_577512.1 92117783 4033183 complement(2512003..2512476) 1 NC_007964.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2512476 smpB 4033183 smpB Nitrobacter hamburgensis X14 SsrA-binding protein YP_577512.1 2512003 R 323097 CDS YP_577513.1 92117784 4033184 complement(2512541..2512960) 1 NC_007964.1 homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 2512960 mscL 4033184 mscL Nitrobacter hamburgensis X14 large-conductance mechanosensitive channel YP_577513.1 2512541 R 323097 CDS YP_577514.1 92117785 4033185 complement(2513032..2513922) 1 NC_007964.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 2513922 4033185 Nham_2262 Nitrobacter hamburgensis X14 dihydrodipicolinate synthase YP_577514.1 2513032 R 323097 CDS YP_577515.1 92117786 4033186 2514154..2516403 1 NC_007964.1 lytic transglycosylase, catalytic 2516403 4033186 Nham_2263 Nitrobacter hamburgensis X14 lytic transglycosylase, catalytic YP_577515.1 2514154 D 323097 CDS YP_577516.1 92117787 4032533 complement(2516524..2516820) 1 NC_007964.1 hypothetical protein 2516820 4032533 Nham_2264 Nitrobacter hamburgensis X14 hypothetical protein YP_577516.1 2516524 R 323097 CDS YP_577517.1 92117788 4032534 complement(2517062..2518582) 1 NC_007964.1 porin 2518582 4032534 Nham_2265 Nitrobacter hamburgensis X14 porin YP_577517.1 2517062 R 323097 CDS YP_577518.1 92117789 4032535 complement(2519168..2520676) 1 NC_007964.1 porin 2520676 4032535 Nham_2266 Nitrobacter hamburgensis X14 porin YP_577518.1 2519168 R 323097 CDS YP_577519.1 92117790 4032537 2521513..2522370 1 NC_007964.1 hypothetical protein 2522370 4032537 Nham_2267 Nitrobacter hamburgensis X14 hypothetical protein YP_577519.1 2521513 D 323097 CDS YP_577520.1 92117791 4032538 complement(2522425..2522691) 1 NC_007964.1 hypothetical protein 2522691 4032538 Nham_2268 Nitrobacter hamburgensis X14 hypothetical protein YP_577520.1 2522425 R 323097 CDS YP_577521.1 92117792 4032539 complement(2523065..2523394) 1 NC_007964.1 hypothetical protein 2523394 4032539 Nham_2269 Nitrobacter hamburgensis X14 hypothetical protein YP_577521.1 2523065 R 323097 CDS YP_577522.1 92117793 4032540 complement(2523422..2523535) 1 NC_007964.1 hypothetical protein 2523535 4032540 Nham_2270 Nitrobacter hamburgensis X14 hypothetical protein YP_577522.1 2523422 R 323097 CDS YP_577523.1 92117794 4032541 complement(2524244..2525728) 1 NC_007964.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 2525728 gatB 4032541 gatB Nitrobacter hamburgensis X14 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_577523.1 2524244 R 323097 CDS YP_577524.1 92117795 4032542 complement(2526084..2527199) 1 NC_007964.1 transposase IS116/IS110/IS902 2527199 4032542 Nham_2272 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_577524.1 2526084 R 323097 CDS YP_577525.1 92117796 4032543 complement(2527302..2528717) 1 NC_007964.1 patatin 2528717 4032543 Nham_2273 Nitrobacter hamburgensis X14 patatin YP_577525.1 2527302 R 323097 CDS YP_577526.1 92117797 4032544 complement(2528714..2529007) 1 NC_007964.1 hypothetical protein 2529007 4032544 Nham_2274 Nitrobacter hamburgensis X14 hypothetical protein YP_577526.1 2528714 R 323097 CDS YP_577527.1 92117798 4032545 complement(2529004..2530479) 1 NC_007964.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 2530479 gatA 4032545 gatA Nitrobacter hamburgensis X14 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_577527.1 2529004 R 323097 CDS YP_577528.1 92117799 4032546 complement(2530476..2530682) 1 NC_007964.1 hypothetical protein 2530682 4032546 Nham_2276 Nitrobacter hamburgensis X14 hypothetical protein YP_577528.1 2530476 R 323097 CDS YP_577529.1 92117800 4032547 complement(2530697..2530984) 1 NC_007964.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 2530984 gatC 4032547 gatC Nitrobacter hamburgensis X14 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_577529.1 2530697 R 323097 CDS YP_577530.1 92117801 4032548 complement(2531153..2532223) 1 NC_007964.1 2-nitropropane dioxygenase 2532223 4032548 Nham_2278 Nitrobacter hamburgensis X14 2-nitropropane dioxygenase YP_577530.1 2531153 R 323097 CDS YP_577531.1 92117802 4032549 2532335..2532841 1 NC_007964.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 2532841 4032549 Nham_2279 Nitrobacter hamburgensis X14 Holliday junction resolvase-like protein YP_577531.1 2532335 D 323097 CDS YP_577532.1 92117803 4032550 complement(2532876..2533685) 1 NC_007964.1 abortive infection protein 2533685 4032550 Nham_2280 Nitrobacter hamburgensis X14 abortive infection protein YP_577532.1 2532876 R 323097 CDS YP_577533.1 92117804 4032513 complement(2533696..2535339) 1 NC_007964.1 acyl-CoA dehydrogenase 2535339 4032513 Nham_2281 Nitrobacter hamburgensis X14 acyl-CoA dehydrogenase YP_577533.1 2533696 R 323097 CDS YP_577534.1 92117805 4032514 2535547..2536500 1 NC_007964.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 2536500 pyrB 4032514 pyrB Nitrobacter hamburgensis X14 aspartate carbamoyltransferase catalytic subunit YP_577534.1 2535547 D 323097 CDS YP_577535.1 92117806 4032515 2536573..2537874 1 NC_007964.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 2537874 4032515 Nham_2283 Nitrobacter hamburgensis X14 dihydroorotase YP_577535.1 2536573 D 323097 CDS YP_577536.1 92117807 4032516 2538041..2538637 1 NC_007964.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY 2538637 4032516 Nham_2284 Nitrobacter hamburgensis X14 glycerol-3-phosphate acyltransferase PlsY YP_577536.1 2538041 D 323097 CDS YP_577537.1 92117808 4032517 2538796..2539914 1 NC_007964.1 DNA processing protein DprA 2539914 4032517 Nham_2285 Nitrobacter hamburgensis X14 DNA processing protein DprA YP_577537.1 2538796 D 323097 CDS YP_577538.1 92117809 4032518 complement(2540026..2541396) 1 NC_007964.1 hypothetical protein 2541396 4032518 Nham_2286 Nitrobacter hamburgensis X14 hypothetical protein YP_577538.1 2540026 R 323097 CDS YP_577539.1 92117810 4032519 2541659..2542909 1 NC_007964.1 cyclopropane-fatty-acyl-phospholipid synthase 2542909 4032519 Nham_2287 Nitrobacter hamburgensis X14 cyclopropane-fatty-acyl-phospholipid synthase YP_577539.1 2541659 D 323097 CDS YP_577540.1 92117811 4032520 complement(2543015..2543296) 1 NC_007964.1 hypothetical protein 2543296 4032520 Nham_2288 Nitrobacter hamburgensis X14 hypothetical protein YP_577540.1 2543015 R 323097 CDS YP_577541.1 92117812 4032521 2543612..2545102 1 NC_007964.1 unwinds double stranded DNA; replicative DNA helicase 2545102 4032521 Nham_2289 Nitrobacter hamburgensis X14 replicative DNA helicase YP_577541.1 2543612 D 323097 CDS YP_577542.1 92117813 4032522 2545184..2546380 1 NC_007964.1 alanine racemase 2546380 4032522 Nham_2290 Nitrobacter hamburgensis X14 alanine racemase YP_577542.1 2545184 D 323097 CDS YP_577543.1 92117814 4032523 2546410..2547858 1 NC_007964.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 2547858 4032523 Nham_2291 Nitrobacter hamburgensis X14 DNA repair protein RadA YP_577543.1 2546410 D 323097 CDS YP_577544.1 92117815 4032524 2547947..2548663 1 NC_007964.1 colicin V production protein 2548663 4032524 Nham_2292 Nitrobacter hamburgensis X14 colicin V production protein YP_577544.1 2547947 D 323097 CDS YP_577545.1 92117816 4032525 2548746..2550260 1 NC_007964.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 2550260 4032525 Nham_2293 Nitrobacter hamburgensis X14 amidophosphoribosyltransferase YP_577545.1 2548746 D 323097 CDS YP_577546.1 92117817 4032526 complement(2550303..2550833) 1 NC_007964.1 N-acetyltransferase GCN5 2550833 4032526 Nham_2294 Nitrobacter hamburgensis X14 N-acetyltransferase GCN5 YP_577546.1 2550303 R 323097 CDS YP_577547.1 92117818 4032527 complement(2551034..2551537) 1 NC_007964.1 hypothetical protein 2551537 4032527 Nham_2295 Nitrobacter hamburgensis X14 hypothetical protein YP_577547.1 2551034 R 323097 CDS YP_577548.1 92117819 4032528 2552132..2552434 1 NC_007964.1 hypothetical protein 2552434 4032528 Nham_2296 Nitrobacter hamburgensis X14 hypothetical protein YP_577548.1 2552132 D 323097 CDS YP_577549.1 92117820 4032529 2552721..2553788 1 NC_007964.1 hypothetical protein 2553788 4032529 Nham_2297 Nitrobacter hamburgensis X14 hypothetical protein YP_577549.1 2552721 D 323097 CDS YP_577550.1 92117821 4032530 2553867..2554448 1 NC_007964.1 hypothetical protein 2554448 4032530 Nham_2298 Nitrobacter hamburgensis X14 hypothetical protein YP_577550.1 2553867 D 323097 CDS YP_577551.1 92117822 4032531 complement(2554577..2554843) 1 NC_007964.1 hypothetical protein 2554843 4032531 Nham_2299 Nitrobacter hamburgensis X14 hypothetical protein YP_577551.1 2554577 R 323097 CDS YP_577552.1 92117823 4032532 complement(2554943..2556043) 1 NC_007964.1 hypothetical protein 2556043 4032532 Nham_2300 Nitrobacter hamburgensis X14 hypothetical protein YP_577552.1 2554943 R 323097 CDS YP_577553.1 92117824 4029673 complement(2556040..2557077) 1 NC_007964.1 lysine--tRNA ligase 2557077 4029673 Nham_2301 Nitrobacter hamburgensis X14 lysine--tRNA ligase YP_577553.1 2556040 R 323097 CDS YP_577554.1 92117825 4029674 2557221..2557787 1 NC_007964.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 2557787 4029674 Nham_2302 Nitrobacter hamburgensis X14 elongation factor P YP_577554.1 2557221 D 323097 CDS YP_577555.1 92117826 4029675 2557922..2559619 1 NC_007964.1 peptidase M23B 2559619 4029675 Nham_2303 Nitrobacter hamburgensis X14 peptidase M23B YP_577555.1 2557922 D 323097 CDS YP_577556.1 92117827 4029676 2559689..2560912 1 NC_007964.1 lytic murein transglycosylase 2560912 4029676 Nham_2304 Nitrobacter hamburgensis X14 lytic murein transglycosylase YP_577556.1 2559689 D 323097 CDS YP_577557.1 92117828 4029677 complement(2561079..2561501) 1 NC_007964.1 endoribonuclease L-PSP 2561501 4029677 Nham_2305 Nitrobacter hamburgensis X14 endoribonuclease L-PSP YP_577557.1 2561079 R 323097 CDS YP_577558.1 92117829 4029678 complement(2561847..2562878) 1 NC_007964.1 transposase IS116/IS110/IS902 2562878 4029678 Nham_2306 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_577558.1 2561847 R 323097 CDS YP_577559.1 92117830 4029679 complement(2562977..2564818) 1 NC_007964.1 single-stranded-DNA-specific exonuclease RecJ 2564818 4029679 Nham_2307 Nitrobacter hamburgensis X14 single-stranded-DNA-specific exonuclease RecJ YP_577559.1 2562977 R 323097 CDS YP_577560.1 92117831 4029680 complement(2564886..2565881) 1 NC_007964.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 2565881 glpX 4029680 glpX Nitrobacter hamburgensis X14 fructose 1,6-bisphosphatase II YP_577560.1 2564886 R 323097 CDS YP_577561.1 92117832 4029681 complement(2565928..2567250) 1 NC_007964.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 2567250 4029681 Nham_2309 Nitrobacter hamburgensis X14 homoserine dehydrogenase YP_577561.1 2565928 R 323097 CDS YP_577562.1 92117833 4029682 complement(2567332..2568549) 1 NC_007964.1 aminotransferase 2568549 4029682 Nham_2310 Nitrobacter hamburgensis X14 aminotransferase YP_577562.1 2567332 R 323097 CDS YP_577563.1 92117834 4029683 complement(2568805..2569119) 1 NC_007964.1 hypothetical protein 2569119 4029683 Nham_2311 Nitrobacter hamburgensis X14 hypothetical protein YP_577563.1 2568805 R 323097 CDS YP_577564.1 92117835 4029684 2569393..2571198 1 NC_007964.1 Poly(R)-hydroxyalkanoic acid synthase, class I 2571198 4029684 Nham_2312 Nitrobacter hamburgensis X14 Poly(R)-hydroxyalkanoic acid synthase, class I YP_577564.1 2569393 D 323097 CDS YP_577565.1 92117836 4029685 2571411..2571809 1 NC_007964.1 hypothetical protein 2571809 4029685 Nham_2313 Nitrobacter hamburgensis X14 hypothetical protein YP_577565.1 2571411 D 323097 CDS YP_577566.1 92117837 4029686 complement(2571893..2572891) 1 NC_007964.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 2572891 4029686 Nham_2314 Nitrobacter hamburgensis X14 N-acetyl-gamma-glutamyl-phosphate reductase YP_577566.1 2571893 R 323097 CDS YP_577567.1 92117838 4029687 complement(2573006..2573536) 1 NC_007964.1 hypothetical protein 2573536 4029687 Nham_2315 Nitrobacter hamburgensis X14 hypothetical protein YP_577567.1 2573006 R 323097 CDS YP_577568.1 92117839 4029688 2573819..2574187 1 NC_007964.1 hypothetical protein 2574187 4029688 Nham_2316 Nitrobacter hamburgensis X14 hypothetical protein YP_577568.1 2573819 D 323097 CDS YP_577569.1 92117840 4029689 2574303..2576354 1 NC_007964.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 2576354 4029689 Nham_2317 Nitrobacter hamburgensis X14 DNA topoisomerase IV subunit B YP_577569.1 2574303 D 323097 CDS YP_577570.1 92117841 4029690 2576374..2578188 1 NC_007964.1 hypothetical protein 2578188 4029690 Nham_2318 Nitrobacter hamburgensis X14 hypothetical protein YP_577570.1 2576374 D 323097 CDS YP_577571.1 92117842 4029691 2578221..2578406 1 NC_007964.1 hypothetical protein 2578406 4029691 Nham_2319 Nitrobacter hamburgensis X14 hypothetical protein YP_577571.1 2578221 D 323097 CDS YP_577572.1 92117843 4033319 complement(2578547..2579812) 1 NC_007964.1 hypothetical protein 2579812 4033319 Nham_2320 Nitrobacter hamburgensis X14 hypothetical protein YP_577572.1 2578547 R 323097 CDS YP_577573.1 92117844 4033320 2580157..2581620 1 NC_007964.1 DEAD/DEAH box helicase 2581620 4033320 Nham_2321 Nitrobacter hamburgensis X14 DEAD/DEAH box helicase YP_577573.1 2580157 D 323097 CDS YP_577574.1 92117845 4033321 2581850..2582914 1 NC_007964.1 diguanylate cyclase 2582914 4033321 Nham_2322 Nitrobacter hamburgensis X14 diguanylate cyclase YP_577574.1 2581850 D 323097 CDS YP_577575.1 92117846 4033322 complement(2583166..2583570) 1 NC_007964.1 HesB/YadR/YfhF 2583570 4033322 Nham_2323 Nitrobacter hamburgensis X14 HesB/YadR/YfhF YP_577575.1 2583166 R 323097 CDS YP_577576.1 92117847 4033323 complement(2583629..2584009) 1 NC_007964.1 hypothetical protein 2584009 4033323 Nham_2324 Nitrobacter hamburgensis X14 hypothetical protein YP_577576.1 2583629 R 323097 CDS YP_577577.1 92117848 4033324 complement(2584006..2585250) 1 NC_007964.1 SufS subfamily cysteine desulfurase 2585250 4033324 Nham_2325 Nitrobacter hamburgensis X14 SufS subfamily cysteine desulfurase YP_577577.1 2584006 R 323097 CDS YP_577578.1 92117849 4033325 complement(2585406..2586731) 1 NC_007964.1 FeS assembly protein SufD 2586731 4033325 Nham_2326 Nitrobacter hamburgensis X14 FeS assembly protein SufD YP_577578.1 2585406 R 323097 CDS YP_577579.1 92117850 4033326 complement(2586797..2587546) 1 NC_007964.1 FeS assembly ATPase SufC 2587546 4033326 Nham_2327 Nitrobacter hamburgensis X14 FeS assembly ATPase SufC YP_577579.1 2586797 R 323097 CDS YP_577580.1 92117851 4033327 complement(2587690..2589171) 1 NC_007964.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 2589171 4033327 Nham_2328 Nitrobacter hamburgensis X14 cysteine desulfurase activator complex subunit SufB YP_577580.1 2587690 R 323097 CDS YP_577581.1 92117852 4033328 complement(2589252..2590451) 1 NC_007964.1 class V aminotransferase 2590451 4033328 Nham_2329 Nitrobacter hamburgensis X14 class V aminotransferase YP_577581.1 2589252 R 323097 CDS YP_577582.1 92117853 4033329 2590625..2591272 1 NC_007964.1 hypothetical protein 2591272 4033329 Nham_2330 Nitrobacter hamburgensis X14 hypothetical protein YP_577582.1 2590625 D 323097 CDS YP_577583.1 92117854 4033330 complement(2591402..2592502) 1 NC_007964.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 2592502 anmK 4033330 anmK Nitrobacter hamburgensis X14 anhydro-N-acetylmuramic acid kinase YP_577583.1 2591402 R 323097 CDS YP_577584.1 92117855 4033331 2592662..2593918 1 NC_007964.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 2593918 4033331 Nham_2332 Nitrobacter hamburgensis X14 tyrosyl-tRNA synthetase YP_577584.1 2592662 D 323097 CDS YP_577585.1 92117856 4033332 complement(2594017..2597784) 1 NC_007964.1 hypothetical protein 2597784 4033332 Nham_2333 Nitrobacter hamburgensis X14 hypothetical protein YP_577585.1 2594017 R 323097 CDS YP_577586.1 92117857 4033333 2597958..2598593 1 NC_007964.1 alkyl hydroperoxide reductase 2598593 4033333 Nham_2334 Nitrobacter hamburgensis X14 alkyl hydroperoxide reductase YP_577586.1 2597958 D 323097 CDS YP_577587.1 92117858 4033334 2598693..2600060 1 NC_007964.1 peptidase M23B 2600060 4033334 Nham_2335 Nitrobacter hamburgensis X14 peptidase M23B YP_577587.1 2598693 D 323097 CDS YP_577588.1 92117859 4033335 2600575..2602452 1 NC_007964.1 ABC transporter 2602452 4033335 Nham_2336 Nitrobacter hamburgensis X14 ABC transporter YP_577588.1 2600575 D 323097 CDS YP_577589.1 92117860 4033336 complement(2602593..2603141) 1 NC_007964.1 hypothetical protein 2603141 4033336 Nham_2337 Nitrobacter hamburgensis X14 hypothetical protein YP_577589.1 2602593 R 323097 CDS YP_577590.1 92117861 4033337 complement(2603299..2603754) 1 NC_007964.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 2603754 4033337 Nham_2338 Nitrobacter hamburgensis X14 DNA polymerase III subunit chi YP_577590.1 2603299 R 323097 CDS YP_577591.1 92117862 4033338 complement(2603751..2605253) 1 NC_007964.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 2605253 4033338 Nham_2339 Nitrobacter hamburgensis X14 leucyl aminopeptidase YP_577591.1 2603751 R 323097 CDS YP_577592.1 92117863 4032010 2605625..2606794 1 NC_007964.1 permease YjgP/YjgQ 2606794 4032010 Nham_2340 Nitrobacter hamburgensis X14 permease YjgP/YjgQ YP_577592.1 2605625 D 323097 CDS YP_577593.1 92117864 4032011 2606791..2607888 1 NC_007964.1 permease YjgP/YjgQ 2607888 4032011 Nham_2341 Nitrobacter hamburgensis X14 permease YjgP/YjgQ YP_577593.1 2606791 D 323097 CDS YP_577594.1 92117865 4032012 2607888..2610383 1 NC_007964.1 organic solvent tolerance protein 2610383 4032012 Nham_2342 Nitrobacter hamburgensis X14 organic solvent tolerance protein YP_577594.1 2607888 D 323097 CDS YP_577595.1 92117866 4032013 2610487..2611446 1 NC_007964.1 hypothetical protein 2611446 4032013 Nham_2343 Nitrobacter hamburgensis X14 hypothetical protein YP_577595.1 2610487 D 323097 CDS YP_577596.1 92117867 4032014 2611562..2612569 1 NC_007964.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 2612569 pdxA 4032014 pdxA Nitrobacter hamburgensis X14 4-hydroxythreonine-4-phosphate dehydrogenase YP_577596.1 2611562 D 323097 CDS YP_577597.1 92117868 4032015 2612566..2613429 1 NC_007964.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 2613429 ksgA 4032015 ksgA Nitrobacter hamburgensis X14 dimethyladenosine transferase YP_577597.1 2612566 D 323097 CDS YP_577598.1 92117869 4032016 2613443..2614501 1 NC_007964.1 zinc-binding alcohol dehydrogenase 2614501 4032016 Nham_2346 Nitrobacter hamburgensis X14 zinc-binding alcohol dehydrogenase YP_577598.1 2613443 D 323097 CDS YP_577599.1 92117870 4032017 2614704..2615726 1 NC_007964.1 hypothetical protein 2615726 4032017 Nham_2347 Nitrobacter hamburgensis X14 hypothetical protein YP_577599.1 2614704 D 323097 CDS YP_577600.1 92117871 4032018 complement(2615735..2616394) 1 NC_007964.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 2616394 gmk 4032018 gmk Nitrobacter hamburgensis X14 guanylate kinase YP_577600.1 2615735 R 323097 CDS YP_577601.1 92117872 4032019 complement(2616398..2617285) 1 NC_007964.1 hypothetical protein 2617285 4032019 Nham_2349 Nitrobacter hamburgensis X14 hypothetical protein YP_577601.1 2616398 R 323097 CDS YP_577602.1 92117873 4032020 complement(2617682..2618932) 1 NC_007964.1 aminodeoxychorismate lyase 2618932 4032020 Nham_2350 Nitrobacter hamburgensis X14 aminodeoxychorismate lyase YP_577602.1 2617682 R 323097 CDS YP_577603.1 92117874 4032021 complement(2619061..2620326) 1 NC_007964.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 2620326 4032021 Nham_2351 Nitrobacter hamburgensis X14 3-oxoacyl-ACP synthase YP_577603.1 2619061 R 323097 CDS YP_577604.1 92117875 4032022 complement(2620421..2620660) 1 NC_007964.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 2620660 acpP 4032022 acpP Nitrobacter hamburgensis X14 acyl carrier protein YP_577604.1 2620421 R 323097 CDS YP_577605.1 92117876 4032023 complement(2620934..2621671) 1 NC_007964.1 3-oxoacyl-ACP reductase 2621671 4032023 Nham_2353 Nitrobacter hamburgensis X14 3-oxoacyl-ACP reductase YP_577605.1 2620934 R 323097 CDS YP_577606.1 92117877 4032024 complement(2621691..2622650) 1 NC_007964.1 malonyl CoA-ACP transacylase 2622650 4032024 Nham_2354 Nitrobacter hamburgensis X14 malonyl CoA-ACP transacylase YP_577606.1 2621691 R 323097 CDS YP_577607.1 92117878 4032025 2623035..2623478 1 NC_007964.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 2623478 rpsF 4032025 rpsF Nitrobacter hamburgensis X14 30S ribosomal protein S6 YP_577607.1 2623035 D 323097 CDS YP_577608.1 92117879 4032026 2623484..2623723 1 NC_007964.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 2623723 rpsR 4032026 rpsR Nitrobacter hamburgensis X14 30S ribosomal protein S18 YP_577608.1 2623484 D 323097 CDS YP_577609.1 92117880 4032027 2624163..2624510 1 NC_007964.1 hypothetical protein 2624510 4032027 Nham_2357 Nitrobacter hamburgensis X14 hypothetical protein YP_577609.1 2624163 D 323097 CDS YP_577610.1 92117881 4032028 2625220..2625510 1 NC_007964.1 hypothetical protein 2625510 4032028 Nham_2358 Nitrobacter hamburgensis X14 hypothetical protein YP_577610.1 2625220 D 323097 CDS YP_577611.1 92117882 4031108 2625777..2626073 1 NC_007964.1 hypothetical protein 2626073 4031108 Nham_2359 Nitrobacter hamburgensis X14 hypothetical protein YP_577611.1 2625777 D 323097 CDS YP_577612.1 92117883 4031109 complement(2626110..2627054) 1 NC_007964.1 hypothetical protein 2627054 4031109 Nham_2360 Nitrobacter hamburgensis X14 hypothetical protein YP_577612.1 2626110 R 323097 CDS YP_577613.1 92117884 4031110 2627582..2628025 1 NC_007964.1 PRC-barrel protein 2628025 4031110 Nham_2361 Nitrobacter hamburgensis X14 PRC-barrel protein YP_577613.1 2627582 D 323097 CDS YP_577614.1 92117885 4031111 complement(2628925..2629452) 1 NC_007964.1 hypothetical protein 2629452 4031111 Nham_2362 Nitrobacter hamburgensis X14 hypothetical protein YP_577614.1 2628925 R 323097 CDS YP_577615.1 92117886 4031112 complement(2629668..2630291) 1 NC_007964.1 hypothetical protein 2630291 4031112 Nham_2363 Nitrobacter hamburgensis X14 hypothetical protein YP_577615.1 2629668 R 323097 CDS YP_577616.1 92117887 4031113 complement(2630407..2630637) 1 NC_007964.1 hypothetical protein 2630637 4031113 Nham_2364 Nitrobacter hamburgensis X14 hypothetical protein YP_577616.1 2630407 R 323097 CDS YP_577617.1 92117888 4031114 complement(2630839..2631279) 1 NC_007964.1 hypothetical protein 2631279 4031114 Nham_2365 Nitrobacter hamburgensis X14 hypothetical protein YP_577617.1 2630839 R 323097 CDS YP_577618.1 92117889 4031115 complement(2631279..2631716) 1 NC_007964.1 hypothetical protein 2631716 4031115 Nham_2366 Nitrobacter hamburgensis X14 hypothetical protein YP_577618.1 2631279 R 323097 CDS YP_577619.1 92117890 4031116 complement(2631716..2632486) 1 NC_007964.1 hypothetical protein 2632486 4031116 Nham_2367 Nitrobacter hamburgensis X14 hypothetical protein YP_577619.1 2631716 R 323097 CDS YP_577620.1 92117891 4031117 2632689..2633726 1 NC_007964.1 methyltransferase type 12 2633726 4031117 Nham_2368 Nitrobacter hamburgensis X14 methyltransferase type 12 YP_577620.1 2632689 D 323097 CDS YP_577621.1 92117892 4031118 complement(2633911..2636223) 1 NC_007964.1 group 1 glycosyl transferase 2636223 4031118 Nham_2369 Nitrobacter hamburgensis X14 group 1 glycosyl transferase YP_577621.1 2633911 R 323097 CDS YP_577622.1 92117893 4031119 complement(2636207..2637253) 1 NC_007964.1 methyltransferase FkbM 2637253 4031119 Nham_2370 Nitrobacter hamburgensis X14 methyltransferase FkbM YP_577622.1 2636207 R 323097 CDS YP_577623.1 92117894 4031120 complement(2637479..2638549) 1 NC_007964.1 phage late control D 2638549 4031120 Nham_2371 Nitrobacter hamburgensis X14 phage late control D YP_577623.1 2637479 R 323097 CDS YP_577624.1 92117895 4031121 complement(2638553..2638765) 1 NC_007964.1 phage tail X 2638765 4031121 Nham_2372 Nitrobacter hamburgensis X14 phage tail X YP_577624.1 2638553 R 323097 CDS YP_577625.1 92117896 4031122 complement(2638772..2639197) 1 NC_007964.1 phage P2 GpU 2639197 4031122 Nham_2373 Nitrobacter hamburgensis X14 phage P2 GpU YP_577625.1 2638772 R 323097 CDS YP_577626.1 92117897 4031124 complement(2641446..2641685) 1 NC_007964.1 hypothetical protein 2641685 4031124 Nham_2375 Nitrobacter hamburgensis X14 hypothetical protein YP_577626.1 2641446 R 323097 CDS YP_577627.1 92117898 4031125 complement(2641703..2641996) 1 NC_007964.1 hypothetical protein 2641996 4031125 Nham_2376 Nitrobacter hamburgensis X14 hypothetical protein YP_577627.1 2641703 R 323097 CDS YP_577628.1 92117899 4031126 complement(2642006..2642521) 1 NC_007964.1 phage major tail tube protein 2642521 4031126 Nham_2377 Nitrobacter hamburgensis X14 phage major tail tube protein YP_577628.1 2642006 R 323097 CDS YP_577629.1 92117900 4031127 complement(2642581..2644017) 1 NC_007964.1 phage tail sheath protein 2644017 4031127 Nham_2378 Nitrobacter hamburgensis X14 phage tail sheath protein YP_577629.1 2642581 R 323097 CDS YP_577630.1 92117901 4030747 complement(2644060..2644596) 1 NC_007964.1 hypothetical protein 2644596 4030747 Nham_2379 Nitrobacter hamburgensis X14 hypothetical protein YP_577630.1 2644060 R 323097 CDS YP_577631.1 92117902 4030748 complement(2644593..2646365) 1 NC_007964.1 Phage-related tail fiber protein-like 2646365 4030748 Nham_2380 Nitrobacter hamburgensis X14 Phage-related tail fiber protein-like YP_577631.1 2644593 R 323097 CDS YP_577632.1 92117903 4030749 complement(2646366..2647028) 1 NC_007964.1 Phage tail protein I 2647028 4030749 Nham_2381 Nitrobacter hamburgensis X14 Phage tail protein I YP_577632.1 2646366 R 323097 CDS YP_577633.1 92117904 4030750 complement(2647025..2648074) 1 NC_007964.1 baseplate J-like protein 2648074 4030750 Nham_2382 Nitrobacter hamburgensis X14 baseplate J-like protein YP_577633.1 2647025 R 323097 CDS YP_577634.1 92117905 4030751 complement(2648071..2648448) 1 NC_007964.1 hypothetical protein 2648448 4030751 Nham_2383 Nitrobacter hamburgensis X14 hypothetical protein YP_577634.1 2648071 R 323097 CDS YP_577635.1 92117906 4030752 complement(2648657..2649181) 1 NC_007964.1 Phage-related baseplate assembly protein V 2649181 4030752 Nham_2384 Nitrobacter hamburgensis X14 Phage-related baseplate assembly protein V YP_577635.1 2648657 R 323097 CDS YP_577636.1 92117907 4030753 complement(2649185..2649970) 1 NC_007964.1 hypothetical protein 2649970 4030753 Nham_2385 Nitrobacter hamburgensis X14 hypothetical protein YP_577636.1 2649185 R 323097 CDS YP_577637.1 92117908 4030754 complement(2649970..2650350) 1 NC_007964.1 hypothetical protein 2650350 4030754 Nham_2386 Nitrobacter hamburgensis X14 hypothetical protein YP_577637.1 2649970 R 323097 CDS YP_577638.1 92117909 4030755 complement(2650402..2651433) 1 NC_007964.1 hypothetical protein 2651433 4030755 Nham_2387 Nitrobacter hamburgensis X14 hypothetical protein YP_577638.1 2650402 R 323097 CDS YP_577639.1 92117910 4030756 complement(2651519..2652172) 1 NC_007964.1 hypothetical protein 2652172 4030756 Nham_2388 Nitrobacter hamburgensis X14 hypothetical protein YP_577639.1 2651519 R 323097 CDS YP_577640.1 92117911 4030757 complement(2652187..2653242) 1 NC_007964.1 peptidase S14, ClpP 2653242 4030757 Nham_2389 Nitrobacter hamburgensis X14 peptidase S14, ClpP YP_577640.1 2652187 R 323097 CDS YP_577641.1 92117912 4030758 complement(2653258..2653497) 1 NC_007964.1 hypothetical protein 2653497 4030758 Nham_2390 Nitrobacter hamburgensis X14 hypothetical protein YP_577641.1 2653258 R 323097 CDS YP_577642.1 92117913 4030759 complement(2653494..2655110) 1 NC_007964.1 phage portal protein, lambda 2655110 4030759 Nham_2391 Nitrobacter hamburgensis X14 phage portal protein, lambda YP_577642.1 2653494 R 323097 CDS YP_577643.1 92117914 4030760 complement(2655107..2656870) 1 NC_007964.1 phage terminase GpA 2656870 4030760 Nham_2392 Nitrobacter hamburgensis X14 phage terminase GpA YP_577643.1 2655107 R 323097 CDS YP_577644.1 92117915 4030761 complement(2656818..2657366) 1 NC_007964.1 hypothetical protein 2657366 4030761 Nham_2393 Nitrobacter hamburgensis X14 hypothetical protein YP_577644.1 2656818 R 323097 CDS YP_577645.1 92117916 4030762 complement(2657596..2658171) 1 NC_007964.1 hypothetical protein 2658171 4030762 Nham_2394 Nitrobacter hamburgensis X14 hypothetical protein YP_577645.1 2657596 R 323097 CDS YP_577646.1 92117917 4030763 2658225..2658425 1 NC_007964.1 hypothetical protein 2658425 4030763 Nham_2395 Nitrobacter hamburgensis X14 hypothetical protein YP_577646.1 2658225 D 323097 CDS YP_577647.1 92117918 4030764 2658873..2659046 1 NC_007964.1 hypothetical protein 2659046 4030764 Nham_2396 Nitrobacter hamburgensis X14 hypothetical protein YP_577647.1 2658873 D 323097 CDS YP_577648.1 92117919 4030765 complement(2659584..2660006) 1 NC_007964.1 hypothetical protein 2660006 4030765 Nham_2397 Nitrobacter hamburgensis X14 hypothetical protein YP_577648.1 2659584 R 323097 CDS YP_577649.1 92117920 4030611 complement(2660003..2660593) 1 NC_007964.1 NusG antitermination factor 2660593 4030611 Nham_2398 Nitrobacter hamburgensis X14 NusG antitermination factor YP_577649.1 2660003 R 323097 CDS YP_577650.1 92117921 4030612 complement(2660615..2660950) 1 NC_007964.1 hypothetical protein 2660950 4030612 Nham_2399 Nitrobacter hamburgensis X14 hypothetical protein YP_577650.1 2660615 R 323097 CDS YP_577651.1 92117922 4030613 complement(2661416..2662549) 1 NC_007964.1 hypothetical protein 2662549 4030613 Nham_2400 Nitrobacter hamburgensis X14 hypothetical protein YP_577651.1 2661416 R 323097 CDS YP_577652.1 92117923 4030614 complement(2662546..2663067) 1 NC_007964.1 hypothetical protein 2663067 4030614 Nham_2401 Nitrobacter hamburgensis X14 hypothetical protein YP_577652.1 2662546 R 323097 CDS YP_577653.1 92117924 4030615 complement(2663189..2664223) 1 NC_007964.1 hypothetical protein 2664223 4030615 Nham_2402 Nitrobacter hamburgensis X14 hypothetical protein YP_577653.1 2663189 R 323097 CDS YP_577654.1 92117925 4030616 complement(2664402..2664998) 1 NC_007964.1 hypothetical protein 2664998 4030616 Nham_2403 Nitrobacter hamburgensis X14 hypothetical protein YP_577654.1 2664402 R 323097 CDS YP_577655.1 92117926 4030617 complement(2665218..2665502) 1 NC_007964.1 hypothetical protein 2665502 4030617 Nham_2404 Nitrobacter hamburgensis X14 hypothetical protein YP_577655.1 2665218 R 323097 CDS YP_577656.1 92117927 4030618 2665560..2666222 1 NC_007964.1 phage repressor 2666222 4030618 Nham_2405 Nitrobacter hamburgensis X14 phage repressor YP_577656.1 2665560 D 323097 CDS YP_577657.1 92117928 4030619 2666686..2667285 1 NC_007964.1 hypothetical protein 2667285 4030619 Nham_2406 Nitrobacter hamburgensis X14 hypothetical protein YP_577657.1 2666686 D 323097 CDS YP_577658.1 92117929 4030620 complement(2668010..2668471) 1 NC_007964.1 hypothetical protein 2668471 4030620 Nham_2407 Nitrobacter hamburgensis X14 hypothetical protein YP_577658.1 2668010 R 323097 CDS YP_577659.1 92117930 4030621 2668960..2669724 1 NC_007964.1 phage-encoded protein-like protein 2669724 4030621 Nham_2408 Nitrobacter hamburgensis X14 phage-encoded protein-like protein YP_577659.1 2668960 D 323097 CDS YP_577660.1 92117931 4030622 2669721..2670050 1 NC_007964.1 hypothetical protein 2670050 4030622 Nham_2409 Nitrobacter hamburgensis X14 hypothetical protein YP_577660.1 2669721 D 323097 CDS YP_577661.1 92117932 4030623 2670288..2671010 1 NC_007964.1 hypothetical protein 2671010 4030623 Nham_2410 Nitrobacter hamburgensis X14 hypothetical protein YP_577661.1 2670288 D 323097 CDS YP_577662.1 92117933 4030624 2671013..2671603 1 NC_007964.1 hypothetical protein 2671603 4030624 Nham_2411 Nitrobacter hamburgensis X14 hypothetical protein YP_577662.1 2671013 D 323097 CDS YP_577663.1 92117934 4030626 2671895..2673097 1 NC_007964.1 phage integrase 2673097 4030626 Nham_2413 Nitrobacter hamburgensis X14 phage integrase YP_577663.1 2671895 D 323097 CDS YP_577664.1 92117935 4030627 2673810..2674796 1 NC_007964.1 hypothetical protein 2674796 4030627 Nham_2414 Nitrobacter hamburgensis X14 hypothetical protein YP_577664.1 2673810 D 323097 CDS YP_577665.1 92117936 4030628 2674839..2675447 1 NC_007964.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 2675447 rplI 4030628 rplI Nitrobacter hamburgensis X14 50S ribosomal protein L9 YP_577665.1 2674839 D 323097 CDS YP_577666.1 92117937 4030629 complement(2675690..2678089) 1 NC_007964.1 ATPase 2678089 4030629 Nham_2416 Nitrobacter hamburgensis X14 ATPase YP_577666.1 2675690 R 323097 CDS YP_577667.1 92117938 4030630 complement(2678349..2678723) 1 NC_007964.1 ATP-dependent Clp protease adaptor protein ClpS 2678723 4030630 Nham_2417 Nitrobacter hamburgensis X14 ATP-dependent Clp protease adaptor protein ClpS YP_577667.1 2678349 R 323097 CDS YP_577668.1 92117939 4030361 2679165..2680616 1 NC_007964.1 hypothetical protein 2680616 4030361 Nham_2418 Nitrobacter hamburgensis X14 hypothetical protein YP_577668.1 2679165 D 323097 CDS YP_577669.1 92117940 4030362 complement(2680693..2681031) 1 NC_007964.1 hypothetical protein 2681031 4030362 Nham_2419 Nitrobacter hamburgensis X14 hypothetical protein YP_577669.1 2680693 R 323097 CDS YP_577670.1 92117941 4030363 2681399..2683159 1 NC_007964.1 Serine-type D-Ala-D-Ala carboxypeptidase 2683159 4030363 Nham_2420 Nitrobacter hamburgensis X14 Serine-type D-Ala-D-Ala carboxypeptidase YP_577670.1 2681399 D 323097 CDS YP_577671.1 92117942 4030364 complement(2683374..2684159) 1 NC_007964.1 heat shock protein DnaJ-like 2684159 4030364 Nham_2421 Nitrobacter hamburgensis X14 heat shock protein DnaJ-like YP_577671.1 2683374 R 323097 CDS YP_577672.1 92117943 4030365 complement(2684188..2684883) 1 NC_007964.1 hypothetical protein 2684883 4030365 Nham_2422 Nitrobacter hamburgensis X14 hypothetical protein YP_577672.1 2684188 R 323097 CDS YP_577673.1 92117944 4030366 2685278..2686129 1 NC_007964.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 2686129 panC 4030366 panC Nitrobacter hamburgensis X14 pantoate--beta-alanine ligase YP_577673.1 2685278 D 323097 CDS YP_577674.1 92117945 4030367 2686252..2687595 1 NC_007964.1 transposase, IS4 2687595 4030367 Nham_2424 Nitrobacter hamburgensis X14 transposase, IS4 YP_577674.1 2686252 D 323097 CDS YP_577675.1 92117946 4030368 complement(2687893..2688348) 1 NC_007964.1 hypothetical protein 2688348 4030368 Nham_2425 Nitrobacter hamburgensis X14 hypothetical protein YP_577675.1 2687893 R 323097 CDS YP_577676.1 92117947 4030369 complement(2688352..2689293) 1 NC_007964.1 hypothetical protein 2689293 4030369 Nham_2426 Nitrobacter hamburgensis X14 hypothetical protein YP_577676.1 2688352 R 323097 CDS YP_577677.1 92117948 4030370 complement(2689584..2689775) 1 NC_007964.1 hypothetical protein 2689775 4030370 Nham_2427 Nitrobacter hamburgensis X14 hypothetical protein YP_577677.1 2689584 R 323097 CDS YP_577678.1 92117949 4030371 complement(2690052..2690708) 1 NC_007964.1 glutathione S-transferase 2690708 4030371 Nham_2428 Nitrobacter hamburgensis X14 glutathione S-transferase YP_577678.1 2690052 R 323097 CDS YP_577679.1 92117950 4030372 complement(2690780..2691643) 1 NC_007964.1 hypothetical protein 2691643 4030372 Nham_2429 Nitrobacter hamburgensis X14 hypothetical protein YP_577679.1 2690780 R 323097 CDS YP_577680.1 92117951 4030373 2691745..2692014 1 NC_007964.1 hypothetical protein 2692014 4030373 Nham_2430 Nitrobacter hamburgensis X14 hypothetical protein YP_577680.1 2691745 D 323097 CDS YP_577681.1 92117952 4030374 complement(2692023..2692826) 1 NC_007964.1 hypothetical protein 2692826 4030374 Nham_2431 Nitrobacter hamburgensis X14 hypothetical protein YP_577681.1 2692023 R 323097 CDS YP_577682.1 92117953 4030375 complement(2692920..2693738) 1 NC_007964.1 2,5-didehydrogluconate reductase 2693738 4030375 Nham_2432 Nitrobacter hamburgensis X14 2,5-didehydrogluconate reductase YP_577682.1 2692920 R 323097 CDS YP_577683.1 92117954 4030376 complement(2693839..2694204) 1 NC_007964.1 XRE family transcriptional regulator 2694204 4030376 Nham_2433 Nitrobacter hamburgensis X14 XRE family transcriptional regulator YP_577683.1 2693839 R 323097 CDS YP_577684.1 92117955 4030377 2694274..2695155 1 NC_007964.1 polysaccharide deacetylase 2695155 4030377 Nham_2434 Nitrobacter hamburgensis X14 polysaccharide deacetylase YP_577684.1 2694274 D 323097 CDS YP_577685.1 92117956 4030378 2695242..2696528 1 NC_007964.1 polysaccharide deacetylase 2696528 4030378 Nham_2435 Nitrobacter hamburgensis X14 polysaccharide deacetylase YP_577685.1 2695242 D 323097 CDS YP_577686.1 92117957 4030379 complement(2696590..2696820) 1 NC_007964.1 hypothetical protein 2696820 4030379 Nham_2436 Nitrobacter hamburgensis X14 hypothetical protein YP_577686.1 2696590 R 323097 CDS YP_577687.1 92117958 4029271 2696986..2699796 1 NC_007964.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 2699796 4029271 Nham_2437 Nitrobacter hamburgensis X14 DNA topoisomerase I YP_577687.1 2696986 D 323097 CDS YP_577688.1 92117959 4029272 2699777..2702149 1 NC_007964.1 ribonuclease R 2702149 4029272 Nham_2438 Nitrobacter hamburgensis X14 ribonuclease R YP_577688.1 2699777 D 323097 CDS YP_577689.1 92117960 4029273 2702146..2702586 1 NC_007964.1 hypothetical protein 2702586 4029273 Nham_2439 Nitrobacter hamburgensis X14 hypothetical protein YP_577689.1 2702146 D 323097 CDS YP_577690.1 92117961 4029274 2702630..2703370 1 NC_007964.1 NUDIX hydrolase 2703370 4029274 Nham_2440 Nitrobacter hamburgensis X14 NUDIX hydrolase YP_577690.1 2702630 D 323097 CDS YP_577691.1 92117962 4029275 2703546..2703713 1 NC_007964.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 2703713 rpmG 4029275 rpmG Nitrobacter hamburgensis X14 50S ribosomal protein L33 YP_577691.1 2703546 D 323097 CDS YP_577692.1 92117963 4029276 complement(2703842..2705215) 1 NC_007964.1 involved in swarmer-to-stalked cell differentiation in Caulobacter crescentus; catalyzes the condensation of two GTP molecules to form the secondary messenger cyclic di-GMP (c-di-GMP); upon phosphorylation of domain D1 the protein dimerizes; presumably this allows the two GTP-bound GGDEF (diguanylate cyclase) domains to catalyze the condensation reaction; allosterically inhibited by c-di-GMP; response regulator PleD 2705215 pleD 4029276 pleD Nitrobacter hamburgensis X14 response regulator PleD YP_577692.1 2703842 R 323097 CDS YP_577693.1 92117964 4029277 complement(2705226..2705591) 1 NC_007964.1 response regulator receiver domain-containing protein 2705591 4029277 Nham_2443 Nitrobacter hamburgensis X14 response regulator receiver domain-containing protein YP_577693.1 2705226 R 323097 CDS YP_577694.1 92117965 4029278 2705823..2706122 1 NC_007964.1 hypothetical protein 2706122 4029278 Nham_2444 Nitrobacter hamburgensis X14 hypothetical protein YP_577694.1 2705823 D 323097 CDS YP_577695.1 92117966 4029279 2706119..2707408 1 NC_007964.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 2707408 4029279 Nham_2445 Nitrobacter hamburgensis X14 DNA polymerase IV YP_577695.1 2706119 D 323097 CDS YP_577696.1 92117967 4029280 complement(2707448..2708338) 1 NC_007964.1 hypothetical protein 2708338 4029280 Nham_2446 Nitrobacter hamburgensis X14 hypothetical protein YP_577696.1 2707448 R 323097 CDS YP_577697.1 92117968 4029281 2708451..2709545 1 NC_007964.1 tISRso5; ISRSO5-transposase protein 2709545 4029281 Nham_2447 Nitrobacter hamburgensis X14 tISRso5; ISRSO5-transposase protein YP_577697.1 2708451 D 323097 CDS YP_577698.1 92117969 4029282 2709725..2710192 1 NC_007964.1 endoribonuclease L-PSP 2710192 4029282 Nham_2448 Nitrobacter hamburgensis X14 endoribonuclease L-PSP YP_577698.1 2709725 D 323097 CDS YP_577699.1 92117970 4029283 2710198..2710950 1 NC_007964.1 glycerophosphoryl diester phosphodiesterase 2710950 4029283 Nham_2449 Nitrobacter hamburgensis X14 glycerophosphoryl diester phosphodiesterase YP_577699.1 2710198 D 323097 CDS YP_577700.1 92117971 4029284 2711097..2712350 1 NC_007964.1 hypothetical protein 2712350 4029284 Nham_2450 Nitrobacter hamburgensis X14 hypothetical protein YP_577700.1 2711097 D 323097 CDS YP_577701.1 92117972 4029285 2712383..2712811 1 NC_007964.1 histidine triad (HIT) protein 2712811 4029285 Nham_2451 Nitrobacter hamburgensis X14 histidine triad (HIT) protein YP_577701.1 2712383 D 323097 CDS YP_577702.1 92117973 4029286 complement(2712816..2713307) 1 NC_007964.1 hypothetical protein 2713307 4029286 Nham_2452 Nitrobacter hamburgensis X14 hypothetical protein YP_577702.1 2712816 R 323097 CDS YP_577703.1 92117974 4029287 complement(2713534..2714475) 1 NC_007964.1 lytic transglycosylase, catalytic 2714475 4029287 Nham_2453 Nitrobacter hamburgensis X14 lytic transglycosylase, catalytic YP_577703.1 2713534 R 323097 CDS YP_577704.1 92117975 4029288 complement(2714713..2715189) 1 NC_007964.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 2715189 rpsI 4029288 rpsI Nitrobacter hamburgensis X14 30S ribosomal protein S9 YP_577704.1 2714713 R 323097 CDS YP_577705.2 162211270 4029289 complement(2715192..2715656) 1 NC_007964.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 2715656 rplM 4029289 rplM Nitrobacter hamburgensis X14 50S ribosomal protein L13 YP_577705.2 2715192 R 323097 CDS YP_577706.1 92117977 4029290 complement(2715808..2716236) 1 NC_007964.1 phenylacetic acid degradation-related protein 2716236 4029290 Nham_2456 Nitrobacter hamburgensis X14 phenylacetic acid degradation-related protein YP_577706.1 2715808 R 323097 CDS YP_577707.1 92117978 4033148 2716434..2717018 1 NC_007964.1 CoA-binding protein 2717018 4033148 Nham_2457 Nitrobacter hamburgensis X14 CoA-binding protein YP_577707.1 2716434 D 323097 CDS YP_577708.1 92117979 4033149 2717275..2718552 1 NC_007964.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 2718552 4033149 Nham_2458 Nitrobacter hamburgensis X14 O-acetylhomoserine aminocarboxypropyltransferase YP_577708.1 2717275 D 323097 CDS YP_577709.1 92117980 4033150 complement(2718743..2719972) 1 NC_007964.1 major facilitator transporter 2719972 4033150 Nham_2459 Nitrobacter hamburgensis X14 major facilitator transporter YP_577709.1 2718743 R 323097 CDS YP_577710.1 92117981 4033151 complement(2720271..2721440) 1 NC_007964.1 cytochrome oxidase assembly 2721440 4033151 Nham_2460 Nitrobacter hamburgensis X14 cytochrome oxidase assembly YP_577710.1 2720271 R 323097 CDS YP_577711.1 92117982 4033152 2721450..2721656 1 NC_007964.1 hypothetical protein 2721656 4033152 Nham_2461 Nitrobacter hamburgensis X14 hypothetical protein YP_577711.1 2721450 D 323097 CDS YP_577712.1 92117983 4033153 2721833..2723026 1 NC_007964.1 hypothetical protein 2723026 4033153 Nham_2462 Nitrobacter hamburgensis X14 hypothetical protein YP_577712.1 2721833 D 323097 CDS YP_577713.1 92117984 4033154 complement(2723051..2725192) 1 NC_007964.1 lipopolysaccharide biosynthesis protein 2725192 4033154 Nham_2463 Nitrobacter hamburgensis X14 lipopolysaccharide biosynthesis protein YP_577713.1 2723051 R 323097 CDS YP_577714.1 92117985 4033155 2725542..2726249 1 NC_007964.1 polysaccharide export protein 2726249 4033155 Nham_2464 Nitrobacter hamburgensis X14 polysaccharide export protein YP_577714.1 2725542 D 323097 CDS YP_577715.1 92117986 4033156 2726253..2727386 1 NC_007964.1 group 1 glycosyl transferase 2727386 4033156 Nham_2465 Nitrobacter hamburgensis X14 group 1 glycosyl transferase YP_577715.1 2726253 D 323097 CDS YP_577716.1 92117987 4033157 2727510..2729042 1 NC_007964.1 sugar transferase 2729042 4033157 Nham_2466 Nitrobacter hamburgensis X14 sugar transferase YP_577716.1 2727510 D 323097 CDS YP_577717.1 92117988 4033158 2729077..2730342 1 NC_007964.1 hypothetical protein 2730342 4033158 Nham_2467 Nitrobacter hamburgensis X14 hypothetical protein YP_577717.1 2729077 D 323097 CDS YP_577718.1 92117989 4033159 complement(2730358..2731536) 1 NC_007964.1 saccharopine dehydrogenase 2731536 4033159 Nham_2468 Nitrobacter hamburgensis X14 saccharopine dehydrogenase YP_577718.1 2730358 R 323097 CDS YP_577719.1 92117990 4033160 complement(2732262..2732588) 1 NC_007964.1 hypothetical protein 2732588 4033160 Nham_2469 Nitrobacter hamburgensis X14 hypothetical protein YP_577719.1 2732262 R 323097 CDS YP_577720.1 92117991 4033161 2732871..2734565 1 NC_007964.1 phage integrase 2734565 4033161 Nham_2470 Nitrobacter hamburgensis X14 phage integrase YP_577720.1 2732871 D 323097 CDS YP_577721.1 92117992 4033162 complement(2734579..2734920) 1 NC_007964.1 hypothetical protein 2734920 4033162 Nham_2471 Nitrobacter hamburgensis X14 hypothetical protein YP_577721.1 2734579 R 323097 CDS YP_577722.1 92117993 4033163 complement(2735362..2735604) 1 NC_007964.1 hypothetical protein 2735604 4033163 Nham_2472 Nitrobacter hamburgensis X14 hypothetical protein YP_577722.1 2735362 R 323097 CDS YP_577723.1 92117994 4033164 complement(2736007..2736246) 1 NC_007964.1 hypothetical protein 2736246 4033164 Nham_2473 Nitrobacter hamburgensis X14 hypothetical protein YP_577723.1 2736007 R 323097 CDS YP_577724.1 92117995 4033165 complement(2736357..2736662) 1 NC_007964.1 hypothetical protein 2736662 4033165 Nham_2474 Nitrobacter hamburgensis X14 hypothetical protein YP_577724.1 2736357 R 323097 CDS YP_577725.1 92117996 4033166 complement(2736861..2737196) 1 NC_007964.1 hypothetical protein 2737196 4033166 Nham_2475 Nitrobacter hamburgensis X14 hypothetical protein YP_577725.1 2736861 R 323097 CDS YP_577726.1 92117997 4030265 complement(2737658..2737903) 1 NC_007964.1 hypothetical protein 2737903 4030265 Nham_2476 Nitrobacter hamburgensis X14 hypothetical protein YP_577726.1 2737658 R 323097 CDS YP_577727.1 92117998 4030266 complement(2738823..2741021) 1 NC_007964.1 hypothetical protein 2741021 4030266 Nham_2477 Nitrobacter hamburgensis X14 hypothetical protein YP_577727.1 2738823 R 323097 CDS YP_577728.1 92117999 4030267 complement(2741018..2741359) 1 NC_007964.1 hypothetical protein 2741359 4030267 Nham_2478 Nitrobacter hamburgensis X14 hypothetical protein YP_577728.1 2741018 R 323097 CDS YP_577729.1 92118000 4030268 complement(2741356..2741760) 1 NC_007964.1 Phage protein, HK97, gp10 2741760 4030268 Nham_2479 Nitrobacter hamburgensis X14 Phage protein, HK97, gp10 YP_577729.1 2741356 R 323097 CDS YP_577730.1 92118001 4030269 complement(2741757..2743394) 1 NC_007964.1 phage terminase 2743394 4030269 Nham_2480 Nitrobacter hamburgensis X14 phage terminase YP_577730.1 2741757 R 323097 CDS YP_577731.1 92118002 4030270 complement(2743366..2743758) 1 NC_007964.1 phage terminase, small subunit , P27 2743758 4030270 Nham_2481 Nitrobacter hamburgensis X14 phage terminase, small subunit , P27 YP_577731.1 2743366 R 323097 CDS YP_577732.1 92118003 4030271 complement(2743755..2744072) 1 NC_007964.1 hypothetical protein 2744072 4030271 Nham_2482 Nitrobacter hamburgensis X14 hypothetical protein YP_577732.1 2743755 R 323097 CDS YP_577733.1 92118004 4030272 complement(2744069..2744482) 1 NC_007964.1 hypothetical protein 2744482 4030272 Nham_2483 Nitrobacter hamburgensis X14 hypothetical protein YP_577733.1 2744069 R 323097 CDS YP_577734.1 92118005 4030273 complement(2744482..2744763) 1 NC_007964.1 phage protein 2744763 4030273 Nham_2484 Nitrobacter hamburgensis X14 phage protein YP_577734.1 2744482 R 323097 CDS YP_577735.1 92118006 4030274 complement(2744991..2745428) 1 NC_007964.1 hypothetical protein 2745428 4030274 Nham_2485 Nitrobacter hamburgensis X14 hypothetical protein YP_577735.1 2744991 R 323097 CDS YP_577736.1 92118007 4030275 complement(2745428..2745763) 1 NC_007964.1 HNH endonuclease 2745763 4030275 Nham_2486 Nitrobacter hamburgensis X14 HNH endonuclease YP_577736.1 2745428 R 323097 CDS YP_577737.1 92118008 4030276 complement(2745763..2746341) 1 NC_007964.1 hypothetical protein 2746341 4030276 Nham_2487 Nitrobacter hamburgensis X14 hypothetical protein YP_577737.1 2745763 R 323097 CDS YP_577738.1 92118009 4030277 complement(2746355..2746741) 1 NC_007964.1 hypothetical protein 2746741 4030277 Nham_2488 Nitrobacter hamburgensis X14 hypothetical protein YP_577738.1 2746355 R 323097 CDS YP_577739.1 92118010 4030278 complement(2746804..2747976) 1 NC_007964.1 phage major capsid protein, HK97 2747976 4030278 Nham_2489 Nitrobacter hamburgensis X14 phage major capsid protein, HK97 YP_577739.1 2746804 R 323097 CDS YP_577740.1 92118011 4030279 complement(2747978..2748475) 1 NC_007964.1 peptidase U35, phage prohead HK97 2748475 4030279 Nham_2490 Nitrobacter hamburgensis X14 peptidase U35, phage prohead HK97 YP_577740.1 2747978 R 323097 CDS YP_577741.1 92118012 4030280 complement(2748651..2748977) 1 NC_007964.1 hypothetical protein 2748977 4030280 Nham_2491 Nitrobacter hamburgensis X14 hypothetical protein YP_577741.1 2748651 R 323097 CDS YP_577742.1 92118013 4030281 complement(2748974..2750161) 1 NC_007964.1 Phage portal protein, HK97 2750161 4030281 Nham_2492 Nitrobacter hamburgensis X14 Phage portal protein, HK97 YP_577742.1 2748974 R 323097 CDS YP_577743.1 92118014 4030283 complement(2750857..2751507) 1 NC_007964.1 hypothetical protein 2751507 4030283 Nham_2493 Nitrobacter hamburgensis X14 hypothetical protein YP_577743.1 2750857 R 323097 CDS YP_577744.1 92118015 4029770 complement(2751672..2752151) 1 NC_007964.1 hypothetical protein 2752151 4029770 Nham_2494 Nitrobacter hamburgensis X14 hypothetical protein YP_577744.1 2751672 R 323097 CDS YP_577745.1 92118016 4029772 2752956..2753339 1 NC_007964.1 hypothetical protein 2753339 4029772 Nham_2496 Nitrobacter hamburgensis X14 hypothetical protein YP_577745.1 2752956 D 323097 CDS YP_577746.1 92118017 4029773 2754341..2754898 1 NC_007964.1 cytochrome P460 2754898 4029773 Nham_2497 Nitrobacter hamburgensis X14 cytochrome P460 YP_577746.1 2754341 D 323097 CDS YP_577747.1 92118018 4029775 2755388..2755738 1 NC_007964.1 ISGsu3, transposase 2755738 4029775 Nham_2499 Nitrobacter hamburgensis X14 ISGsu3, transposase YP_577747.1 2755388 D 323097 CDS YP_577748.1 92118019 4029776 2755773..2756498 1 NC_007964.1 transposase, IS4 2756498 4029776 Nham_2500 Nitrobacter hamburgensis X14 transposase, IS4 YP_577748.1 2755773 D 323097 CDS YP_577749.1 92118020 4029779 2758595..2758960 1 NC_007964.1 hypothetical protein 2758960 4029779 Nham_2503 Nitrobacter hamburgensis X14 hypothetical protein YP_577749.1 2758595 D 323097 CDS YP_577750.1 92118021 4029780 2759088..2759468 1 NC_007964.1 hypothetical protein 2759468 4029780 Nham_2504 Nitrobacter hamburgensis X14 hypothetical protein YP_577750.1 2759088 D 323097 CDS YP_577751.1 92118022 4029782 2760904..2761269 1 NC_007964.1 PRC-barrel protein 2761269 4029782 Nham_2506 Nitrobacter hamburgensis X14 PRC-barrel protein YP_577751.1 2760904 D 323097 CDS YP_577752.1 92118023 4029785 2762434..2763285 1 NC_007964.1 RNA methyltransferase TrmH, group 3 2763285 4029785 Nham_2508 Nitrobacter hamburgensis X14 RNA methyltransferase TrmH, group 3 YP_577752.1 2762434 D 323097 CDS YP_577753.1 92118024 4029786 complement(2763354..2763926) 1 NC_007964.1 hypothetical protein 2763926 4029786 Nham_2509 Nitrobacter hamburgensis X14 hypothetical protein YP_577753.1 2763354 R 323097 CDS YP_577754.1 92118025 4029787 complement(2763993..2764439) 1 NC_007964.1 hypothetical protein 2764439 4029787 Nham_2510 Nitrobacter hamburgensis X14 hypothetical protein YP_577754.1 2763993 R 323097 CDS YP_577755.1 92118026 4029732 complement(2765357..2766118) 1 NC_007964.1 hypothetical protein 2766118 4029732 Nham_2511 Nitrobacter hamburgensis X14 hypothetical protein YP_577755.1 2765357 R 323097 CDS YP_577756.1 92118027 4029733 2766220..2767173 1 NC_007964.1 hypothetical protein 2767173 4029733 Nham_2512 Nitrobacter hamburgensis X14 hypothetical protein YP_577756.1 2766220 D 323097 CDS YP_577757.1 92118028 4029734 2767164..2767577 1 NC_007964.1 hypothetical protein 2767577 4029734 Nham_2513 Nitrobacter hamburgensis X14 hypothetical protein YP_577757.1 2767164 D 323097 CDS YP_577758.1 92118029 4029735 2767574..2768524 1 NC_007964.1 hypothetical protein 2768524 4029735 Nham_2514 Nitrobacter hamburgensis X14 hypothetical protein YP_577758.1 2767574 D 323097 CDS YP_577759.1 92118030 4029737 complement(2769198..2770292) 1 NC_007964.1 tISRso5; ISRSO5-transposase protein 2770292 4029737 Nham_2516 Nitrobacter hamburgensis X14 tISRso5; ISRSO5-transposase protein YP_577759.1 2769198 R 323097 CDS YP_577760.1 92118031 4029738 2771007..2771450 1 NC_007964.1 DNA mismatch endonuclease vsr 2771450 4029738 Nham_2517 Nitrobacter hamburgensis X14 DNA mismatch endonuclease vsr YP_577760.1 2771007 D 323097 CDS YP_577761.1 92118032 4029740 complement(2772078..2772575) 1 NC_007964.1 hypothetical protein 2772575 4029740 Nham_2519 Nitrobacter hamburgensis X14 hypothetical protein YP_577761.1 2772078 R 323097 CDS YP_577762.1 92118033 4029741 complement(2772661..2772984) 1 NC_007964.1 hypothetical protein 2772984 4029741 Nham_2520 Nitrobacter hamburgensis X14 hypothetical protein YP_577762.1 2772661 R 323097 CDS YP_577763.1 92118034 4029742 2773064..2773324 1 NC_007964.1 XRE family transcriptional regulator 2773324 4029742 Nham_2521 Nitrobacter hamburgensis X14 XRE family transcriptional regulator YP_577763.1 2773064 D 323097 CDS YP_577764.1 92118035 4029743 complement(2773355..2773690) 1 NC_007964.1 hypothetical protein 2773690 4029743 Nham_2522 Nitrobacter hamburgensis X14 hypothetical protein YP_577764.1 2773355 R 323097 CDS YP_577765.1 92118036 4029744 complement(2773693..2773926) 1 NC_007964.1 hypothetical protein 2773926 4029744 Nham_2523 Nitrobacter hamburgensis X14 hypothetical protein YP_577765.1 2773693 R 323097 CDS YP_577766.1 92118037 4029745 complement(2773929..2774735) 1 NC_007964.1 hypothetical protein 2774735 4029745 Nham_2524 Nitrobacter hamburgensis X14 hypothetical protein YP_577766.1 2773929 R 323097 CDS YP_577767.1 92118038 4029746 2774828..2775424 1 NC_007964.1 hypothetical protein 2775424 4029746 Nham_2525 Nitrobacter hamburgensis X14 hypothetical protein YP_577767.1 2774828 D 323097 CDS YP_577768.1 92118039 4029747 complement(2775719..2776159) 1 NC_007964.1 hypothetical protein 2776159 4029747 Nham_2526 Nitrobacter hamburgensis X14 hypothetical protein YP_577768.1 2775719 R 323097 CDS YP_577769.1 92118040 4029748 complement(2776680..2778950) 1 NC_007964.1 hypothetical protein 2778950 4029748 Nham_2527 Nitrobacter hamburgensis X14 hypothetical protein YP_577769.1 2776680 R 323097 CDS YP_577770.1 92118041 4029749 complement(2778947..2779186) 1 NC_007964.1 hypothetical protein 2779186 4029749 Nham_2528 Nitrobacter hamburgensis X14 hypothetical protein YP_577770.1 2778947 R 323097 CDS YP_577771.1 92118042 4033205 complement(2779377..2780504) 1 NC_007964.1 phage integrase 2780504 4033205 Nham_2529 Nitrobacter hamburgensis X14 phage integrase YP_577771.1 2779377 R 323097 CDS YP_577772.1 92118043 4033206 complement(2781390..2781599) 1 NC_007964.1 prevent-host-death protein 2781599 4033206 Nham_2530 Nitrobacter hamburgensis X14 prevent-host-death protein YP_577772.1 2781390 R 323097 CDS YP_577773.1 92118044 4033207 complement(2781862..2790399) 1 NC_007964.1 glycosyltransferase 2790399 4033207 Nham_2531 Nitrobacter hamburgensis X14 glycosyltransferase YP_577773.1 2781862 R 323097 CDS YP_577774.1 92118045 4033208 complement(2790726..2791163) 1 NC_007964.1 hypothetical protein 2791163 4033208 Nham_2532 Nitrobacter hamburgensis X14 hypothetical protein YP_577774.1 2790726 R 323097 CDS YP_577775.1 92118046 4033209 complement(2791426..2791635) 1 NC_007964.1 cold-shock DNA-binding domain-containing protein 2791635 4033209 Nham_2533 Nitrobacter hamburgensis X14 cold-shock DNA-binding domain-containing protein YP_577775.1 2791426 R 323097 CDS YP_577776.1 92118047 4033210 complement(2791844..2792914) 1 NC_007964.1 signal transduction histidine kinase 2792914 4033210 Nham_2534 Nitrobacter hamburgensis X14 signal transduction histidine kinase YP_577776.1 2791844 R 323097 CDS YP_577777.1 92118048 4033211 2793199..2793885 1 NC_007964.1 cyclic nucleotide-binding domain-containing protein 2793885 4033211 Nham_2535 Nitrobacter hamburgensis X14 cyclic nucleotide-binding domain-containing protein YP_577777.1 2793199 D 323097 CDS YP_577778.1 92118049 4033212 complement(2793914..2794987) 1 NC_007964.1 zinc-binding alcohol dehydrogenase 2794987 4033212 Nham_2536 Nitrobacter hamburgensis X14 zinc-binding alcohol dehydrogenase YP_577778.1 2793914 R 323097 CDS YP_577779.1 92118050 4033213 complement(2795526..2796284) 1 NC_007964.1 transcriptional regulator-like protein 2796284 4033213 Nham_2537 Nitrobacter hamburgensis X14 transcriptional regulator-like protein YP_577779.1 2795526 R 323097 CDS YP_577780.1 92118051 4033214 2796630..2798489 1 NC_007964.1 ABC transporter 2798489 4033214 Nham_2538 Nitrobacter hamburgensis X14 ABC transporter YP_577780.1 2796630 D 323097 CDS YP_577781.1 92118052 4033215 complement(2798547..2798795) 1 NC_007964.1 hypothetical protein 2798795 4033215 Nham_2539 Nitrobacter hamburgensis X14 hypothetical protein YP_577781.1 2798547 R 323097 CDS YP_577782.1 92118053 4033216 2798798..2799208 1 NC_007964.1 signal-transduction protein 2799208 4033216 Nham_2540 Nitrobacter hamburgensis X14 signal-transduction protein YP_577782.1 2798798 D 323097 CDS YP_577783.1 92118054 4033217 2799693..2800742 1 NC_007964.1 fatty acid desaturase 2800742 4033217 Nham_2541 Nitrobacter hamburgensis X14 fatty acid desaturase YP_577783.1 2799693 D 323097 CDS YP_577784.1 92118055 4033218 complement(2801253..2802875) 1 NC_007964.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 2802875 guaA 4033218 guaA Nitrobacter hamburgensis X14 GMP synthase YP_577784.1 2801253 R 323097 CDS YP_577785.1 92118056 4033219 complement(2803022..2804323) 1 NC_007964.1 hypothetical protein 2804323 4033219 Nham_2543 Nitrobacter hamburgensis X14 hypothetical protein YP_577785.1 2803022 R 323097 CDS YP_577786.1 92118057 4033220 complement(2804352..2804771) 1 NC_007964.1 hypothetical protein 2804771 4033220 Nham_2544 Nitrobacter hamburgensis X14 hypothetical protein YP_577786.1 2804352 R 323097 CDS YP_577787.1 92118058 4033221 complement(2804808..2805425) 1 NC_007964.1 hypothetical protein 2805425 4033221 Nham_2545 Nitrobacter hamburgensis X14 hypothetical protein YP_577787.1 2804808 R 323097 CDS YP_577788.1 92118059 4033222 complement(2805674..2807170) 1 NC_007964.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 2807170 4033222 Nham_2546 Nitrobacter hamburgensis X14 inosine 5'-monophosphate dehydrogenase YP_577788.1 2805674 R 323097 CDS YP_577789.1 92118060 4033223 complement(2807519..2807767) 1 NC_007964.1 hypothetical protein 2807767 4033223 Nham_2547 Nitrobacter hamburgensis X14 hypothetical protein YP_577789.1 2807519 R 323097 CDS YP_577790.1 92118061 4032203 2807886..2809358 1 NC_007964.1 EmrB/QacA family drug resistance transporter 2809358 4032203 Nham_2548 Nitrobacter hamburgensis X14 EmrB/QacA family drug resistance transporter YP_577790.1 2807886 D 323097 CDS YP_577791.1 92118062 4032204 complement(2809420..2810106) 1 NC_007964.1 ribosomal RNA methyltransferase RrmJ/FtsJ 2810106 4032204 Nham_2549 Nitrobacter hamburgensis X14 ribosomal RNA methyltransferase RrmJ/FtsJ YP_577791.1 2809420 R 323097 CDS YP_577792.1 92118063 4032205 complement(2810242..2811237) 1 NC_007964.1 Ppx/GppA phosphatase 2811237 4032205 Nham_2550 Nitrobacter hamburgensis X14 Ppx/GppA phosphatase YP_577792.1 2810242 R 323097 CDS YP_577793.1 92118064 4032206 2811608..2812108 1 NC_007964.1 hypothetical protein 2812108 4032206 Nham_2551 Nitrobacter hamburgensis X14 hypothetical protein YP_577793.1 2811608 D 323097 CDS YP_577794.1 92118065 4032207 2812113..2813927 1 NC_007964.1 ABC transporter 2813927 4032207 Nham_2552 Nitrobacter hamburgensis X14 ABC transporter YP_577794.1 2812113 D 323097 CDS YP_577795.1 92118066 4032208 complement(2813945..2815174) 1 NC_007964.1 HI0933-like protein 2815174 4032208 Nham_2553 Nitrobacter hamburgensis X14 HI0933-like protein YP_577795.1 2813945 R 323097 CDS YP_577796.1 92118067 4032209 complement(2815181..2815660) 1 NC_007964.1 MaoC-like dehydratase 2815660 4032209 Nham_2554 Nitrobacter hamburgensis X14 MaoC-like dehydratase YP_577796.1 2815181 R 323097 CDS YP_577797.1 92118068 4032210 complement(2815664..2817397) 1 NC_007964.1 AMP-dependent synthetase and ligase 2817397 4032210 Nham_2555 Nitrobacter hamburgensis X14 AMP-dependent synthetase and ligase YP_577797.1 2815664 R 323097 CDS YP_577798.1 92118069 4032211 complement(2817394..2818293) 1 NC_007964.1 3-hydroxyisobutyrate dehydrogenase 2818293 4032211 Nham_2556 Nitrobacter hamburgensis X14 3-hydroxyisobutyrate dehydrogenase YP_577798.1 2817394 R 323097 CDS YP_577799.1 92118070 4032212 complement(2818326..2819399) 1 NC_007964.1 catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase 2819399 4032212 Nham_2557 Nitrobacter hamburgensis X14 3-hydroxyisobutyryl-CoA hydrolase YP_577799.1 2818326 R 323097 CDS YP_577800.1 92118071 4032213 complement(2819396..2820541) 1 NC_007964.1 acyl-CoA dehydrogenase 2820541 4032213 Nham_2558 Nitrobacter hamburgensis X14 acyl-CoA dehydrogenase YP_577800.1 2819396 R 323097 CDS YP_577801.1 92118072 4032214 complement(2820573..2822066) 1 NC_007964.1 methylmalonate-semialdehyde dehydrogenase 2822066 4032214 Nham_2559 Nitrobacter hamburgensis X14 methylmalonate-semialdehyde dehydrogenase YP_577801.1 2820573 R 323097 CDS YP_577802.1 92118073 4032215 complement(2822244..2823413) 1 NC_007964.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 2823413 4032215 Nham_2560 Nitrobacter hamburgensis X14 acetyl-CoA acetyltransferase YP_577802.1 2822244 R 323097 CDS YP_577803.1 92118074 4032216 complement(2823769..2824362) 1 NC_007964.1 nuclear protein SET 2824362 4032216 Nham_2561 Nitrobacter hamburgensis X14 nuclear protein SET YP_577803.1 2823769 R 323097 CDS YP_577804.1 92118075 4032217 2824762..2825703 1 NC_007964.1 hypothetical protein 2825703 4032217 Nham_2562 Nitrobacter hamburgensis X14 hypothetical protein YP_577804.1 2824762 D 323097 CDS YP_577805.1 92118076 4032218 2825843..2826313 1 NC_007964.1 hypothetical protein 2826313 4032218 Nham_2563 Nitrobacter hamburgensis X14 hypothetical protein YP_577805.1 2825843 D 323097 CDS YP_577806.1 92118077 4032219 2826435..2827127 1 NC_007964.1 isoprenylcysteine carboxyl methyltransferase 2827127 4032219 Nham_2564 Nitrobacter hamburgensis X14 isoprenylcysteine carboxyl methyltransferase YP_577806.1 2826435 D 323097 CDS YP_577807.1 92118078 4032220 2827159..2827518 1 NC_007964.1 glutathione-dependent formaldehyde-activating protein 2827518 4032220 Nham_2565 Nitrobacter hamburgensis X14 glutathione-dependent formaldehyde-activating protein YP_577807.1 2827159 D 323097 CDS YP_577808.1 92118079 4032221 complement(2827626..2828309) 1 NC_007964.1 hypothetical protein 2828309 4032221 Nham_2566 Nitrobacter hamburgensis X14 hypothetical protein YP_577808.1 2827626 R 323097 CDS YP_577809.1 92118080 4032222 complement(2828479..2829417) 1 NC_007964.1 import inner membrane translocase, subunit Tim44 2829417 4032222 Nham_2567 Nitrobacter hamburgensis X14 import inner membrane translocase, subunit Tim44 YP_577809.1 2828479 R 323097 CDS YP_577810.1 92118081 4031972 complement(2829565..2829909) 1 NC_007964.1 hypothetical protein 2829909 4031972 Nham_2568 Nitrobacter hamburgensis X14 hypothetical protein YP_577810.1 2829565 R 323097 CDS YP_577811.1 92118082 4031973 2830032..2831339 1 NC_007964.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 2831339 4031973 Nham_2569 Nitrobacter hamburgensis X14 adenylosuccinate lyase YP_577811.1 2830032 D 323097 CDS YP_577812.1 92118083 4031974 complement(2831503..2832096) 1 NC_007964.1 cytochrome B561 2832096 4031974 Nham_2570 Nitrobacter hamburgensis X14 cytochrome B561 YP_577812.1 2831503 R 323097 CDS YP_577813.1 92118084 4031975 2832352..2832960 1 NC_007964.1 hypothetical protein 2832960 4031975 Nham_2571 Nitrobacter hamburgensis X14 hypothetical protein YP_577813.1 2832352 D 323097 CDS YP_577814.1 92118085 4031976 2833281..2833901 1 NC_007964.1 transglutaminase-like cysteine peptidase, BTLCP 2833901 4031976 Nham_2572 Nitrobacter hamburgensis X14 transglutaminase-like cysteine peptidase, BTLCP YP_577814.1 2833281 D 323097 CDS YP_577815.1 92118086 4031977 complement(2834116..2834580) 1 NC_007964.1 peptidylprolyl isomerase 2834580 4031977 Nham_2573 Nitrobacter hamburgensis X14 peptidylprolyl isomerase YP_577815.1 2834116 R 323097 CDS YP_577816.1 92118087 4031978 complement(2834723..2835178) 1 NC_007964.1 hypothetical protein 2835178 4031978 Nham_2574 Nitrobacter hamburgensis X14 hypothetical protein YP_577816.1 2834723 R 323097 CDS YP_577817.1 92118088 4031979 complement(2835315..2835845) 1 NC_007964.1 carbonic anhydrase 2835845 4031979 Nham_2575 Nitrobacter hamburgensis X14 carbonic anhydrase YP_577817.1 2835315 R 323097 CDS YP_577818.1 92118089 4031980 complement(2835885..2836259) 1 NC_007964.1 hypothetical protein 2836259 4031980 Nham_2576 Nitrobacter hamburgensis X14 hypothetical protein YP_577818.1 2835885 R 323097 CDS YP_577819.1 92118090 4031981 2836424..2837137 1 NC_007964.1 hypothetical protein 2837137 4031981 Nham_2577 Nitrobacter hamburgensis X14 hypothetical protein YP_577819.1 2836424 D 323097 CDS YP_577820.1 92118091 4031982 complement(2837226..2837444) 1 NC_007964.1 hypothetical protein 2837444 4031982 Nham_2578 Nitrobacter hamburgensis X14 hypothetical protein YP_577820.1 2837226 R 323097 CDS YP_577821.1 92118092 4031983 complement(2837557..2838378) 1 NC_007964.1 serine O-acetyltransferase 2838378 4031983 Nham_2579 Nitrobacter hamburgensis X14 serine O-acetyltransferase YP_577821.1 2837557 R 323097 CDS YP_577822.1 92118093 4031984 2838605..2840041 1 NC_007964.1 hypothetical protein 2840041 4031984 Nham_2580 Nitrobacter hamburgensis X14 hypothetical protein YP_577822.1 2838605 D 323097 CDS YP_577823.1 92118094 4031985 complement(2840027..2840779) 1 NC_007964.1 alpha/beta hydrolase 2840779 4031985 Nham_2581 Nitrobacter hamburgensis X14 alpha/beta hydrolase YP_577823.1 2840027 R 323097 CDS YP_577824.1 92118095 4031986 complement(2840838..2841941) 1 NC_007964.1 hypothetical protein 2841941 4031986 Nham_2582 Nitrobacter hamburgensis X14 hypothetical protein YP_577824.1 2840838 R 323097 CDS YP_577825.1 92118096 4031987 2842216..2842461 1 NC_007964.1 hypothetical protein 2842461 4031987 Nham_2583 Nitrobacter hamburgensis X14 hypothetical protein YP_577825.1 2842216 D 323097 CDS YP_577826.1 92118097 4031988 2842469..2843671 1 NC_007964.1 monooxygenase, FAD-binding 2843671 4031988 Nham_2584 Nitrobacter hamburgensis X14 monooxygenase, FAD-binding YP_577826.1 2842469 D 323097 CDS YP_577827.1 92118098 4031989 complement(2843724..2844155) 1 NC_007964.1 twin-arginine translocation pathway signal 2844155 4031989 Nham_2585 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_577827.1 2843724 R 323097 CDS YP_577828.1 92118099 4031990 complement(2844264..2845520) 1 NC_007964.1 peptidase M29, aminopeptidase II 2845520 4031990 Nham_2586 Nitrobacter hamburgensis X14 peptidase M29, aminopeptidase II YP_577828.1 2844264 R 323097 CDS YP_577829.1 92118100 4031778 2845851..2846243 1 NC_007964.1 hypothetical protein 2846243 4031778 Nham_2587 Nitrobacter hamburgensis X14 hypothetical protein YP_577829.1 2845851 D 323097 CDS YP_577830.1 92118101 4031779 complement(2846307..2846912) 1 NC_007964.1 DSBA oxidoreductase 2846912 4031779 Nham_2588 Nitrobacter hamburgensis X14 DSBA oxidoreductase YP_577830.1 2846307 R 323097 CDS YP_577831.1 92118102 4031780 complement(2847156..2847782) 1 NC_007964.1 hypothetical protein 2847782 4031780 Nham_2589 Nitrobacter hamburgensis X14 hypothetical protein YP_577831.1 2847156 R 323097 CDS YP_577832.1 92118103 4031781 complement(2847890..2848396) 1 NC_007964.1 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 2848396 4031781 Nham_2590 Nitrobacter hamburgensis X14 xanthine-guanine phosphoribosyltransferase YP_577832.1 2847890 R 323097 CDS YP_577833.1 92118104 4031782 complement(2848523..2849263) 1 NC_007964.1 molybdopterin binding domain-containing protein 2849263 4031782 Nham_2591 Nitrobacter hamburgensis X14 molybdopterin binding domain-containing protein YP_577833.1 2848523 R 323097 CDS YP_577834.1 92118105 4031783 complement(2849575..2849874) 1 NC_007964.1 hypothetical protein 2849874 4031783 Nham_2592 Nitrobacter hamburgensis X14 hypothetical protein YP_577834.1 2849575 R 323097 CDS YP_577835.1 92118106 4031784 2850296..2850613 1 NC_007964.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 2850613 groES 4031784 groES Nitrobacter hamburgensis X14 co-chaperonin GroES YP_577835.1 2850296 D 323097 CDS YP_577836.1 92118107 4031785 2850788..2852428 1 NC_007964.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is co-regulated with symbiotic nitrogen fixation genes; chaperonin GroEL 2852428 groEL 4031785 groEL Nitrobacter hamburgensis X14 chaperonin GroEL YP_577836.1 2850788 D 323097 CDS YP_577837.1 92118108 4031786 complement(2852681..2853130) 1 NC_007964.1 glyoxalase/bleomycin resistance protein/dioxygenase 2853130 4031786 Nham_2595 Nitrobacter hamburgensis X14 glyoxalase/bleomycin resistance protein/dioxygenase YP_577837.1 2852681 R 323097 CDS YP_577838.1 92118109 4031787 2853456..2854565 1 NC_007964.1 transposase, IS4 2854565 4031787 Nham_2596 Nitrobacter hamburgensis X14 transposase, IS4 YP_577838.1 2853456 D 323097 CDS YP_577839.1 92118110 4031788 complement(2854793..2856289) 1 NC_007964.1 glycosyl transferase family protein 2856289 4031788 Nham_2597 Nitrobacter hamburgensis X14 glycosyl transferase family protein YP_577839.1 2854793 R 323097 CDS YP_577840.1 92118111 4031789 complement(2856297..2857427) 1 NC_007964.1 dolichyl-phosphate beta-D-mannosyltransferase 2857427 4031789 Nham_2598 Nitrobacter hamburgensis X14 dolichyl-phosphate beta-D-mannosyltransferase YP_577840.1 2856297 R 323097 CDS YP_577841.1 92118112 4031790 2857689..2858492 1 NC_007964.1 hypothetical protein 2858492 4031790 Nham_2599 Nitrobacter hamburgensis X14 hypothetical protein YP_577841.1 2857689 D 323097 CDS YP_577842.1 92118113 4031791 2858671..2859423 1 NC_007964.1 hypothetical protein 2859423 4031791 Nham_2600 Nitrobacter hamburgensis X14 hypothetical protein YP_577842.1 2858671 D 323097 CDS YP_577843.1 92118114 4031792 complement(2859502..2861106) 1 NC_007964.1 molybdopterin binding domain-containing protein 2861106 4031792 Nham_2601 Nitrobacter hamburgensis X14 molybdopterin binding domain-containing protein YP_577843.1 2859502 R 323097 CDS YP_577844.1 92118115 4031793 complement(2861103..2861795) 1 NC_007964.1 hypothetical protein 2861795 4031793 Nham_2602 Nitrobacter hamburgensis X14 hypothetical protein YP_577844.1 2861103 R 323097 CDS YP_577845.1 92118116 4031794 complement(2861803..2862135) 1 NC_007964.1 hypothetical protein 2862135 4031794 Nham_2603 Nitrobacter hamburgensis X14 hypothetical protein YP_577845.1 2861803 R 323097 CDS YP_577846.1 92118117 4031795 complement(2862110..2863342) 1 NC_007964.1 VWA containing CoxE-like 2863342 4031795 Nham_2604 Nitrobacter hamburgensis X14 VWA containing CoxE-like YP_577846.1 2862110 R 323097 CDS YP_577847.1 92118118 4031128 complement(2863355..2864266) 1 NC_007964.1 ATPase 2864266 4031128 Nham_2605 Nitrobacter hamburgensis X14 ATPase YP_577847.1 2863355 R 323097 CDS YP_577848.1 92118119 4031129 complement(2864303..2865109) 1 NC_007964.1 carbon-monoxide dehydrogenase 2865109 4031129 Nham_2606 Nitrobacter hamburgensis X14 carbon-monoxide dehydrogenase YP_577848.1 2864303 R 323097 CDS YP_577849.1 92118120 4031130 complement(2865168..2865653) 1 NC_007964.1 (2Fe-2S)-binding protein 2865653 4031130 Nham_2607 Nitrobacter hamburgensis X14 (2Fe-2S)-binding protein YP_577849.1 2865168 R 323097 CDS YP_577850.1 92118121 4031131 complement(2865801..2866247) 1 NC_007964.1 carbon monoxide dehydrogenase subunit G 2866247 4031131 Nham_2608 Nitrobacter hamburgensis X14 carbon monoxide dehydrogenase subunit G YP_577850.1 2865801 R 323097 CDS YP_577851.1 92118122 4031132 2866629..2867444 1 NC_007964.1 3-oxoadipate enol-lactonase 2867444 4031132 Nham_2609 Nitrobacter hamburgensis X14 3-oxoadipate enol-lactonase YP_577851.1 2866629 D 323097 CDS YP_577852.1 92118123 4031133 complement(2867496..2868026) 1 NC_007964.1 hypothetical protein 2868026 4031133 Nham_2610 Nitrobacter hamburgensis X14 hypothetical protein YP_577852.1 2867496 R 323097 CDS YP_577853.1 92118124 4031134 2868492..2869406 1 NC_007964.1 inner-membrane translocator 2869406 4031134 Nham_2611 Nitrobacter hamburgensis X14 inner-membrane translocator YP_577853.1 2868492 D 323097 CDS YP_577854.1 92118125 4031135 2869418..2870803 1 NC_007964.1 inner-membrane translocator 2870803 4031135 Nham_2612 Nitrobacter hamburgensis X14 inner-membrane translocator YP_577854.1 2869418 D 323097 CDS YP_577855.1 92118126 4031136 2870800..2871636 1 NC_007964.1 ABC transporter 2871636 4031136 Nham_2613 Nitrobacter hamburgensis X14 ABC transporter YP_577855.1 2870800 D 323097 CDS YP_577856.1 92118127 4031137 2871633..2872376 1 NC_007964.1 ABC transporter 2872376 4031137 Nham_2614 Nitrobacter hamburgensis X14 ABC transporter YP_577856.1 2871633 D 323097 CDS YP_577857.1 92118128 4031138 2872649..2873770 1 NC_007964.1 extracellular ligand-binding receptor 2873770 4031138 Nham_2615 Nitrobacter hamburgensis X14 extracellular ligand-binding receptor YP_577857.1 2872649 D 323097 CDS YP_577858.1 92118129 4031139 complement(2873950..2874684) 1 NC_007964.1 cytochrome c biogenesis protein, transmembrane region 2874684 4031139 Nham_2616 Nitrobacter hamburgensis X14 cytochrome c biogenesis protein, transmembrane region YP_577858.1 2873950 R 323097 CDS YP_577859.1 92118130 4031140 2874835..2875833 1 NC_007964.1 peptidase S58, DmpA 2875833 4031140 Nham_2617 Nitrobacter hamburgensis X14 peptidase S58, DmpA YP_577859.1 2874835 D 323097 CDS YP_577860.1 92118131 4031141 2876051..2876305 1 NC_007964.1 hypothetical protein 2876305 4031141 Nham_2618 Nitrobacter hamburgensis X14 hypothetical protein YP_577860.1 2876051 D 323097 CDS YP_577861.1 92118132 4031142 complement(2876352..2877506) 1 NC_007964.1 hypothetical protein 2877506 4031142 Nham_2619 Nitrobacter hamburgensis X14 hypothetical protein YP_577861.1 2876352 R 323097 CDS YP_577862.1 92118133 4031143 2877892..2878593 1 NC_007964.1 ribulose-phosphate 3-epimerase 2878593 4031143 Nham_2620 Nitrobacter hamburgensis X14 ribulose-phosphate 3-epimerase YP_577862.1 2877892 D 323097 CDS YP_577863.1 92118134 4031145 2878954..2881041 1 NC_007964.1 TonB-dependent receptor, plug 2881041 4031145 Nham_2621 Nitrobacter hamburgensis X14 TonB-dependent receptor, plug YP_577863.1 2878954 D 323097 CDS YP_577864.1 92118135 4032822 complement(2881244..2881849) 1 NC_007964.1 peptidoglycan binding domain-containing protein 2881849 4032822 Nham_2622 Nitrobacter hamburgensis X14 peptidoglycan binding domain-containing protein YP_577864.1 2881244 R 323097 CDS YP_577865.1 92118136 4032823 complement(2881842..2883686) 1 NC_007964.1 multi-sensor signal transduction histidine kinase 2883686 4032823 Nham_2623 Nitrobacter hamburgensis X14 multi-sensor signal transduction histidine kinase YP_577865.1 2881842 R 323097 CDS YP_577866.1 92118137 4032824 2884105..2884512 1 NC_007964.1 hypothetical protein 2884512 4032824 Nham_2624 Nitrobacter hamburgensis X14 hypothetical protein YP_577866.1 2884105 D 323097 CDS YP_577867.1 92118138 4032825 2884793..2885221 1 NC_007964.1 Fe-S metabolism associated SufE 2885221 4032825 Nham_2625 Nitrobacter hamburgensis X14 Fe-S metabolism associated SufE YP_577867.1 2884793 D 323097 CDS YP_577868.1 92118139 4032827 complement(2886680..2887093) 1 NC_007964.1 MucR family transcriptional regulator 2887093 4032827 Nham_2627 Nitrobacter hamburgensis X14 MucR family transcriptional regulator YP_577868.1 2886680 R 323097 CDS YP_577869.1 92118140 4032828 complement(2887213..2888130) 1 NC_007964.1 hypothetical protein 2888130 4032828 Nham_2628 Nitrobacter hamburgensis X14 hypothetical protein YP_577869.1 2887213 R 323097 CDS YP_577870.1 92118141 4032829 complement(2888441..2889847) 1 NC_007964.1 hypothetical protein 2889847 4032829 Nham_2629 Nitrobacter hamburgensis X14 hypothetical protein YP_577870.1 2888441 R 323097 CDS YP_577871.1 92118142 4032830 complement(2889882..2891246) 1 NC_007964.1 hypothetical protein 2891246 4032830 Nham_2630 Nitrobacter hamburgensis X14 hypothetical protein YP_577871.1 2889882 R 323097 CDS YP_577872.1 92118143 4032831 complement(2891307..2892875) 1 NC_007964.1 hypothetical protein 2892875 4032831 Nham_2631 Nitrobacter hamburgensis X14 hypothetical protein YP_577872.1 2891307 R 323097 CDS YP_577873.1 92118144 4032832 2893390..2893848 1 NC_007964.1 hypothetical protein 2893848 4032832 Nham_2632 Nitrobacter hamburgensis X14 hypothetical protein YP_577873.1 2893390 D 323097 CDS YP_577874.1 92118145 4032833 2893896..2894780 1 NC_007964.1 dihydropteroate synthase 2894780 4032833 Nham_2633 Nitrobacter hamburgensis X14 dihydropteroate synthase YP_577874.1 2893896 D 323097 CDS YP_577875.1 92118146 4032834 2894956..2895321 1 NC_007964.1 dihydroneopterin aldolase 2895321 4032834 Nham_2634 Nitrobacter hamburgensis X14 dihydroneopterin aldolase YP_577875.1 2894956 D 323097 CDS YP_577876.1 92118147 4032835 2895331..2895822 1 NC_007964.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 2895822 4032835 Nham_2635 Nitrobacter hamburgensis X14 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_577876.1 2895331 D 323097 CDS YP_577877.1 92118148 4032836 2896037..2897926 1 NC_007964.1 methylmalonyl-CoA mutase 2897926 4032836 Nham_2636 Nitrobacter hamburgensis X14 methylmalonyl-CoA mutase YP_577877.1 2896037 D 323097 CDS YP_577878.1 92118149 4032837 2897923..2898387 1 NC_007964.1 glutathione-dependent formaldehyde-activating protein 2898387 4032837 Nham_2637 Nitrobacter hamburgensis X14 glutathione-dependent formaldehyde-activating protein YP_577878.1 2897923 D 323097 CDS YP_577879.1 92118150 4032838 2898388..2900550 1 NC_007964.1 MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 2900550 4032838 Nham_2638 Nitrobacter hamburgensis X14 methylmalonyl-CoA mutase YP_577879.1 2898388 D 323097 CDS YP_577880.1 92118151 4032839 2900822..2901652 1 NC_007964.1 hypothetical protein 2901652 4032839 Nham_2639 Nitrobacter hamburgensis X14 hypothetical protein YP_577880.1 2900822 D 323097 CDS YP_577881.1 92118152 4032840 2901649..2902629 1 NC_007964.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase 2902629 4032840 Nham_2640 Nitrobacter hamburgensis X14 arginine/ornithine transport system ATPase YP_577881.1 2901649 D 323097 CDS YP_577882.1 92118153 4032841 complement(2902668..2903873) 1 NC_007964.1 FAD-binding monooxygenase 2903873 4032841 Nham_2641 Nitrobacter hamburgensis X14 FAD-binding monooxygenase YP_577882.1 2902668 R 323097 CDS YP_577883.1 92118154 4029503 complement(2903877..2905901) 1 NC_007964.1 hypothetical protein 2905901 4029503 Nham_2642 Nitrobacter hamburgensis X14 hypothetical protein YP_577883.1 2903877 R 323097 CDS YP_577884.1 92118155 4029504 complement(2905993..2906349) 1 NC_007964.1 twin-arginine translocation pathway signal 2906349 4029504 Nham_2643 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_577884.1 2905993 R 323097 CDS YP_577885.1 92118156 4029505 2907126..2907788 1 NC_007964.1 peptidase C15, pyroglutamyl peptidase I 2907788 4029505 Nham_2644 Nitrobacter hamburgensis X14 peptidase C15, pyroglutamyl peptidase I YP_577885.1 2907126 D 323097 CDS YP_577886.1 92118157 4029506 2907893..2909155 1 NC_007964.1 Bcr/CflA subfamily drug resistance transporter 2909155 4029506 Nham_2645 Nitrobacter hamburgensis X14 Bcr/CflA subfamily drug resistance transporter YP_577886.1 2907893 D 323097 CDS YP_577887.1 92118158 4029507 2909269..2910636 1 NC_007964.1 nitrous oxidase accessory protein 2910636 4029507 Nham_2646 Nitrobacter hamburgensis X14 nitrous oxidase accessory protein YP_577887.1 2909269 D 323097 CDS YP_577888.1 92118159 4029508 complement(2910751..2911821) 1 NC_007964.1 high-affinity nickel-transporter 2911821 4029508 Nham_2647 Nitrobacter hamburgensis X14 high-affinity nickel-transporter YP_577888.1 2910751 R 323097 CDS YP_577889.1 92118160 4029509 complement(2911827..2912105) 1 NC_007964.1 hypothetical protein 2912105 4029509 Nham_2648 Nitrobacter hamburgensis X14 hypothetical protein YP_577889.1 2911827 R 323097 CDS YP_577890.1 92118161 4029510 complement(2912316..2912975) 1 NC_007964.1 hypothetical protein 2912975 4029510 Nham_2649 Nitrobacter hamburgensis X14 hypothetical protein YP_577890.1 2912316 R 323097 CDS YP_577891.1 92118162 4029512 2913473..2913742 1 NC_007964.1 hypothetical protein 2913742 4029512 Nham_2651 Nitrobacter hamburgensis X14 hypothetical protein YP_577891.1 2913473 D 323097 CDS YP_577892.1 92118163 4029513 2913799..2914092 1 NC_007964.1 hypothetical protein 2914092 4029513 Nham_2652 Nitrobacter hamburgensis X14 hypothetical protein YP_577892.1 2913799 D 323097 CDS YP_577893.1 92118164 4029514 complement(2914637..2914942) 1 NC_007964.1 hypothetical protein 2914942 4029514 Nham_2653 Nitrobacter hamburgensis X14 hypothetical protein YP_577893.1 2914637 R 323097 CDS YP_577894.1 92118165 4029515 2915367..2915618 1 NC_007964.1 transglycosylase-associated protein 2915618 4029515 Nham_2654 Nitrobacter hamburgensis X14 transglycosylase-associated protein YP_577894.1 2915367 D 323097 CDS YP_577895.1 92118166 4029516 complement(2916337..2917152) 1 NC_007964.1 hypothetical protein 2917152 4029516 Nham_2655 Nitrobacter hamburgensis X14 hypothetical protein YP_577895.1 2916337 R 323097 CDS YP_577896.1 92118167 4029518 complement(2918566..2920449) 1 NC_007964.1 peptidase S8/S53 subtilisin kexin sedolisin 2920449 4029518 Nham_2657 Nitrobacter hamburgensis X14 peptidase S8/S53 subtilisin kexin sedolisin YP_577896.1 2918566 R 323097 CDS YP_577897.1 92118168 4029519 complement(2920484..2921188) 1 NC_007964.1 hypothetical protein 2921188 4029519 Nham_2658 Nitrobacter hamburgensis X14 hypothetical protein YP_577897.1 2920484 R 323097 CDS YP_577898.1 92118169 4029520 complement(2921185..2921754) 1 NC_007964.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 2921754 4029520 Nham_2659 Nitrobacter hamburgensis X14 RNA polymerase sigma factor YP_577898.1 2921185 R 323097 CDS YP_577899.1 92118170 4029521 2922216..2923334 1 NC_007964.1 hypothetical protein 2923334 4029521 Nham_2660 Nitrobacter hamburgensis X14 hypothetical protein YP_577899.1 2922216 D 323097 CDS YP_577900.1 92118171 4032435 2923494..2924210 1 NC_007964.1 hypothetical protein 2924210 4032435 Nham_2661 Nitrobacter hamburgensis X14 hypothetical protein YP_577900.1 2923494 D 323097 CDS YP_577901.1 92118172 4032436 2924481..2925260 1 NC_007964.1 enoyl-CoA hydratase/isomerase 2925260 4032436 Nham_2662 Nitrobacter hamburgensis X14 enoyl-CoA hydratase/isomerase YP_577901.1 2924481 D 323097 CDS YP_577902.1 92118173 4032437 complement(2925428..2927290) 1 NC_007964.1 hypothetical protein 2927290 4032437 Nham_2663 Nitrobacter hamburgensis X14 hypothetical protein YP_577902.1 2925428 R 323097 CDS YP_577903.1 92118174 4032438 complement(2927485..2928732) 1 NC_007964.1 catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase 2928732 4032438 Nham_2664 Nitrobacter hamburgensis X14 threonine dehydratase YP_577903.1 2927485 R 323097 CDS YP_577904.1 92118175 4032439 2929066..2929353 1 NC_007964.1 hypothetical protein 2929353 4032439 Nham_2665 Nitrobacter hamburgensis X14 hypothetical protein YP_577904.1 2929066 D 323097 CDS YP_577905.1 92118176 4032440 complement(2929465..2932959) 1 NC_007964.1 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; error-prone DNA polymerase 2932959 dnaE2 4032440 dnaE2 Nitrobacter hamburgensis X14 error-prone DNA polymerase YP_577905.1 2929465 R 323097 CDS YP_577906.1 92118177 4032441 complement(2932956..2934344) 1 NC_007964.1 hypothetical protein 2934344 4032441 Nham_2667 Nitrobacter hamburgensis X14 hypothetical protein YP_577906.1 2932956 R 323097 CDS YP_577907.1 92118178 4032442 complement(2934439..2935275) 1 NC_007964.1 hypothetical protein 2935275 4032442 Nham_2668 Nitrobacter hamburgensis X14 hypothetical protein YP_577907.1 2934439 R 323097 CDS YP_577908.1 92118179 4032443 2935357..2935611 1 NC_007964.1 hypothetical protein 2935611 4032443 Nham_2669 Nitrobacter hamburgensis X14 hypothetical protein YP_577908.1 2935357 D 323097 CDS YP_577909.1 92118180 4032444 complement(2935629..2936132) 1 NC_007964.1 hypothetical protein 2936132 4032444 Nham_2670 Nitrobacter hamburgensis X14 hypothetical protein YP_577909.1 2935629 R 323097 CDS YP_577910.1 92118181 4032445 complement(2936219..2937403) 1 NC_007964.1 peptidase M20D, amidohydrolase 2937403 4032445 Nham_2671 Nitrobacter hamburgensis X14 peptidase M20D, amidohydrolase YP_577910.1 2936219 R 323097 CDS YP_577911.1 92118182 4032446 2937638..2938579 1 NC_007964.1 metallophosphoesterase 2938579 4032446 Nham_2672 Nitrobacter hamburgensis X14 metallophosphoesterase YP_577911.1 2937638 D 323097 CDS YP_577912.1 92118183 4032447 2938592..2938921 1 NC_007964.1 blue (type1) copper domain-containing protein 2938921 4032447 Nham_2673 Nitrobacter hamburgensis X14 blue (type1) copper domain-containing protein YP_577912.1 2938592 D 323097 CDS YP_577913.1 92118184 4032448 2938914..2939564 1 NC_007964.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 2939564 4032448 Nham_2674 Nitrobacter hamburgensis X14 RNA polymerase sigma factor YP_577913.1 2938914 D 323097 CDS YP_577914.1 92118185 4032449 2939561..2940322 1 NC_007964.1 transmembrane transcriptional regulator (anti-sigma factor) 2940322 4032449 Nham_2675 Nitrobacter hamburgensis X14 transmembrane transcriptional regulator (anti-sigma factor) YP_577914.1 2939561 D 323097 CDS YP_577915.1 92118186 4032450 complement(2940568..2941959) 1 NC_007964.1 class III aminotransferase 2941959 4032450 Nham_2676 Nitrobacter hamburgensis X14 class III aminotransferase YP_577915.1 2940568 R 323097 CDS YP_577916.1 92118187 4032451 2942069..2942764 1 NC_007964.1 hypothetical protein 2942764 4032451 Nham_2677 Nitrobacter hamburgensis X14 hypothetical protein YP_577916.1 2942069 D 323097 CDS YP_577917.1 92118188 4032452 complement(2942717..2945335) 1 NC_007964.1 hypothetical protein 2945335 4032452 Nham_2678 Nitrobacter hamburgensis X14 hypothetical protein YP_577917.1 2942717 R 323097 CDS YP_577918.1 92118189 4032453 2945883..2946827 1 NC_007964.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2946827 ispH 4032453 ispH Nitrobacter hamburgensis X14 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_577918.1 2945883 D 323097 CDS YP_577919.1 92118190 4032454 2946875..2948044 1 NC_007964.1 radical SAM family protein 2948044 4032454 Nham_2680 Nitrobacter hamburgensis X14 radical SAM family protein YP_577919.1 2946875 D 323097 CDS YP_577920.1 92118191 4032379 complement(2948318..2949028) 1 NC_007964.1 hypothetical protein 2949028 4032379 Nham_2681 Nitrobacter hamburgensis X14 hypothetical protein YP_577920.1 2948318 R 323097 CDS YP_577921.1 92118192 4032380 complement(2949049..2951013) 1 NC_007964.1 squalene cyclase 2951013 4032380 Nham_2682 Nitrobacter hamburgensis X14 squalene cyclase YP_577921.1 2949049 R 323097 CDS YP_577922.1 92118193 4032381 complement(2951034..2952281) 1 NC_007964.1 amine oxidase 2952281 4032381 Nham_2683 Nitrobacter hamburgensis X14 amine oxidase YP_577922.1 2951034 R 323097 CDS YP_577923.1 92118194 4032382 complement(2952281..2953117) 1 NC_007964.1 squalene/phytoene synthase 2953117 4032382 Nham_2684 Nitrobacter hamburgensis X14 squalene/phytoene synthase YP_577923.1 2952281 R 323097 CDS YP_577924.1 92118195 4032383 complement(2953114..2953992) 1 NC_007964.1 squalene/phytoene synthase 2953992 4032383 Nham_2685 Nitrobacter hamburgensis X14 squalene/phytoene synthase YP_577924.1 2953114 R 323097 CDS YP_577925.1 92118196 4032384 complement(2954184..2954429) 1 NC_007964.1 hypothetical protein 2954429 4032384 Nham_2686 Nitrobacter hamburgensis X14 hypothetical protein YP_577925.1 2954184 R 323097 CDS YP_577926.1 92118197 4032385 2955012..2955512 1 NC_007964.1 hypothetical protein 2955512 4032385 Nham_2687 Nitrobacter hamburgensis X14 hypothetical protein YP_577926.1 2955012 D 323097 CDS YP_577927.1 92118198 4032386 complement(2955824..2958187) 1 NC_007964.1 RND superfamily transporter 2958187 4032386 Nham_2688 Nitrobacter hamburgensis X14 RND superfamily transporter YP_577927.1 2955824 R 323097 CDS YP_577928.1 92118199 4032387 complement(2958422..2960005) 1 NC_007964.1 radical SAM family protein 2960005 4032387 Nham_2689 Nitrobacter hamburgensis X14 radical SAM family protein YP_577928.1 2958422 R 323097 CDS YP_577929.1 92118200 4032388 complement(2960213..2961562) 1 NC_007964.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 2961562 4032388 Nham_2690 Nitrobacter hamburgensis X14 amidase YP_577929.1 2960213 R 323097 CDS YP_577930.1 92118201 4032389 complement(2961587..2964376) 1 NC_007964.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 2964376 4032389 Nham_2691 Nitrobacter hamburgensis X14 phosphoenolpyruvate carboxylase YP_577930.1 2961587 R 323097 CDS YP_577931.1 92118202 4032390 2964633..2964842 1 NC_007964.1 ferredoxin 2964842 4032390 Nham_2692 Nitrobacter hamburgensis X14 ferredoxin YP_577931.1 2964633 D 323097 CDS YP_577932.1 92118203 4032391 2964917..2966113 1 NC_007964.1 cytochrome P450 2966113 4032391 Nham_2693 Nitrobacter hamburgensis X14 cytochrome P450 YP_577932.1 2964917 D 323097 CDS YP_577933.1 92118204 4032392 2966175..2967395 1 NC_007964.1 OsmC-like protein 2967395 4032392 Nham_2694 Nitrobacter hamburgensis X14 OsmC-like protein YP_577933.1 2966175 D 323097 CDS YP_577934.1 92118205 4032393 2967623..2968237 1 NC_007964.1 TetR family transcriptional regulator 2968237 4032393 Nham_2695 Nitrobacter hamburgensis X14 TetR family transcriptional regulator YP_577934.1 2967623 D 323097 CDS YP_577935.1 92118206 4032394 complement(2968244..2969326) 1 NC_007964.1 hypothetical protein 2969326 4032394 Nham_2696 Nitrobacter hamburgensis X14 hypothetical protein YP_577935.1 2968244 R 323097 CDS YP_577936.1 92118207 4032395 complement(2969578..2969832) 1 NC_007964.1 hypothetical protein 2969832 4032395 Nham_2697 Nitrobacter hamburgensis X14 hypothetical protein YP_577936.1 2969578 R 323097 CDS YP_577937.1 92118208 4032396 complement(2969938..2971239) 1 NC_007964.1 D-amino-acid dehydrogenase 2971239 4032396 Nham_2698 Nitrobacter hamburgensis X14 D-amino-acid dehydrogenase YP_577937.1 2969938 R 323097 CDS YP_577938.1 92118209 4032397 complement(2971424..2974513) 1 NC_007964.1 acriflavin resistance protein 2974513 4032397 Nham_2699 Nitrobacter hamburgensis X14 acriflavin resistance protein YP_577938.1 2971424 R 323097 CDS YP_577939.1 92118210 4030284 complement(2974615..2975826) 1 NC_007964.1 secretion protein HlyD 2975826 4030284 Nham_2700 Nitrobacter hamburgensis X14 secretion protein HlyD YP_577939.1 2974615 R 323097 CDS YP_577940.1 92118211 4030285 complement(2975828..2976547) 1 NC_007964.1 TetR family transcriptional regulator 2976547 4030285 Nham_2701 Nitrobacter hamburgensis X14 TetR family transcriptional regulator YP_577940.1 2975828 R 323097 CDS YP_577941.1 92118212 4030286 complement(2976680..2977939) 1 NC_007964.1 Glu/Leu/Phe/Val dehydrogenase 2977939 4030286 Nham_2702 Nitrobacter hamburgensis X14 Glu/Leu/Phe/Val dehydrogenase YP_577941.1 2976680 R 323097 CDS YP_577942.1 92118213 4030287 complement(2978248..2979468) 1 NC_007964.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2979468 4030287 Nham_2703 Nitrobacter hamburgensis X14 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_577942.1 2978248 R 323097 CDS YP_577943.1 92118214 4030288 2979681..2980955 1 NC_007964.1 beta-lactamase 2980955 4030288 Nham_2704 Nitrobacter hamburgensis X14 beta-lactamase YP_577943.1 2979681 D 323097 CDS YP_577944.1 92118215 4030289 complement(2981030..2981920) 1 NC_007964.1 citrate lyase 2981920 4030289 Nham_2705 Nitrobacter hamburgensis X14 citrate lyase YP_577944.1 2981030 R 323097 CDS YP_577945.1 92118216 4030290 complement(2981917..2982369) 1 NC_007964.1 MaoC-like dehydratase 2982369 4030290 Nham_2706 Nitrobacter hamburgensis X14 MaoC-like dehydratase YP_577945.1 2981917 R 323097 CDS YP_577946.1 92118217 4030291 2982623..2982949 1 NC_007964.1 hypothetical protein 2982949 4030291 Nham_2707 Nitrobacter hamburgensis X14 hypothetical protein YP_577946.1 2982623 D 323097 CDS YP_577947.1 92118218 4030292 complement(2983327..2985114) 1 NC_007964.1 hypothetical protein 2985114 4030292 Nham_2708 Nitrobacter hamburgensis X14 hypothetical protein YP_577947.1 2983327 R 323097 CDS YP_577948.1 92118219 4030293 complement(2985696..2986292) 1 NC_007964.1 hypothetical protein 2986292 4030293 Nham_2709 Nitrobacter hamburgensis X14 hypothetical protein YP_577948.1 2985696 R 323097 CDS YP_577949.1 92118220 4030294 complement(2986289..2986906) 1 NC_007964.1 electron transport protein SCO1/SenC 2986906 4030294 Nham_2710 Nitrobacter hamburgensis X14 electron transport protein SCO1/SenC YP_577949.1 2986289 R 323097 CDS YP_577950.1 92118221 4030295 complement(2986903..2988357) 1 NC_007964.1 cytochrome c oxidase, subunit I 2988357 4030295 Nham_2711 Nitrobacter hamburgensis X14 cytochrome c oxidase, subunit I YP_577950.1 2986903 R 323097 CDS YP_577951.1 92118222 4030296 complement(2988397..2988939) 1 NC_007964.1 cytochrome c oxidase subunit II 2988939 4030296 Nham_2712 Nitrobacter hamburgensis X14 cytochrome c oxidase subunit II YP_577951.1 2988397 R 323097 CDS YP_577952.1 92118223 4030297 complement(2989245..2989607) 1 NC_007964.1 hypothetical protein 2989607 4030297 Nham_2713 Nitrobacter hamburgensis X14 hypothetical protein YP_577952.1 2989245 R 323097 CDS YP_577953.1 92118224 4030299 complement(2990198..2990788) 1 NC_007964.1 hypothetical protein 2990788 4030299 Nham_2714 Nitrobacter hamburgensis X14 hypothetical protein YP_577953.1 2990198 R 323097 CDS YP_577954.1 92118225 4030300 complement(2991006..2992568) 1 NC_007964.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 2992568 4030300 Nham_2715 Nitrobacter hamburgensis X14 2-isopropylmalate synthase YP_577954.1 2991006 R 323097 CDS YP_577955.1 92118226 4030301 complement(2992970..2993986) 1 NC_007964.1 hypothetical protein 2993986 4030301 Nham_2716 Nitrobacter hamburgensis X14 hypothetical protein YP_577955.1 2992970 R 323097 CDS YP_577956.1 92118227 4030302 complement(2994041..2994742) 1 NC_007964.1 hypothetical protein 2994742 4030302 Nham_2717 Nitrobacter hamburgensis X14 hypothetical protein YP_577956.1 2994041 R 323097 CDS YP_577957.1 92118228 4030151 2995047..2995838 1 NC_007964.1 ABC transporter 2995838 4030151 Nham_2718 Nitrobacter hamburgensis X14 ABC transporter YP_577957.1 2995047 D 323097 CDS YP_577958.1 92118229 4030152 2995835..2997394 1 NC_007964.1 substrate-binding region of ABC-type glycine betaine transport system 2997394 4030152 Nham_2719 Nitrobacter hamburgensis X14 substrate-binding region of ABC-type glycine betaine transport system YP_577958.1 2995835 D 323097 CDS YP_577959.1 92118230 4030153 complement(2997658..2998677) 1 NC_007964.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 2998677 4030153 Nham_2720 Nitrobacter hamburgensis X14 ketol-acid reductoisomerase YP_577959.1 2997658 R 323097 CDS YP_577960.1 92118231 4030154 complement(2998841..2999383) 1 NC_007964.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 2999383 ilvH 4030154 ilvH Nitrobacter hamburgensis X14 acetolactate synthase 3 regulatory subunit YP_577960.1 2998841 R 323097 CDS YP_577961.1 92118232 4030155 complement(2999532..3001310) 1 NC_007964.1 acetolactate synthase 3 catalytic subunit 3001310 4030155 Nham_2722 Nitrobacter hamburgensis X14 acetolactate synthase 3 catalytic subunit YP_577961.1 2999532 R 323097 CDS YP_577962.1 92118233 4030156 complement(3001611..3002564) 1 NC_007964.1 tRNA delta(2)-isopentenylpyrophosphate transferase 3002564 4030156 Nham_2723 Nitrobacter hamburgensis X14 tRNA delta(2)-isopentenylpyrophosphate transferase YP_577962.1 3001611 R 323097 CDS YP_577963.1 92118234 4030157 3002731..3003456 1 NC_007964.1 phosphoserine phosphatase SerB 3003456 4030157 Nham_2724 Nitrobacter hamburgensis X14 phosphoserine phosphatase SerB YP_577963.1 3002731 D 323097 CDS YP_577964.1 92118235 4030158 complement(3003600..3005093) 1 NC_007964.1 peptidase S1C, Do 3005093 4030158 Nham_2725 Nitrobacter hamburgensis X14 peptidase S1C, Do YP_577964.1 3003600 R 323097 CDS YP_577965.1 92118236 4030159 complement(3005372..3005572) 1 NC_007964.1 hypothetical protein 3005572 4030159 Nham_2726 Nitrobacter hamburgensis X14 hypothetical protein YP_577965.1 3005372 R 323097 CDS YP_577966.1 92118237 4030160 complement(3005609..3006508) 1 NC_007964.1 HflC protein 3006508 4030160 Nham_2727 Nitrobacter hamburgensis X14 HflC protein YP_577966.1 3005609 R 323097 CDS YP_577967.1 92118238 4030161 complement(3006505..3007662) 1 NC_007964.1 HflK protein 3007662 4030161 Nham_2728 Nitrobacter hamburgensis X14 HflK protein YP_577967.1 3006505 R 323097 CDS YP_577968.1 92118239 4030162 complement(3007822..3008358) 1 NC_007964.1 dihydrofolate reductase 3008358 4030162 Nham_2729 Nitrobacter hamburgensis X14 dihydrofolate reductase YP_577968.1 3007822 R 323097 CDS YP_577969.1 92118240 4030163 complement(3008355..3009149) 1 NC_007964.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 3009149 thyA 4030163 thyA Nitrobacter hamburgensis X14 thymidylate synthase YP_577969.1 3008355 R 323097 CDS YP_577970.1 92118241 4030165 3009840..3010448 1 NC_007964.1 hypothetical protein 3010448 4030165 Nham_2731 Nitrobacter hamburgensis X14 hypothetical protein YP_577970.1 3009840 D 323097 CDS YP_577971.1 92118242 4030166 3010539..3011954 1 NC_007964.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 3011954 fumC 4030166 fumC Nitrobacter hamburgensis X14 fumarate hydratase YP_577971.1 3010539 D 323097 CDS YP_577972.1 92118243 4030167 3012161..3012364 1 NC_007964.1 hypothetical protein 3012364 4030167 Nham_2733 Nitrobacter hamburgensis X14 hypothetical protein YP_577972.1 3012161 D 323097 CDS YP_577973.1 92118244 4030168 3012361..3012615 1 NC_007964.1 hypothetical protein 3012615 4030168 Nham_2734 Nitrobacter hamburgensis X14 hypothetical protein YP_577973.1 3012361 D 323097 CDS YP_577974.1 92118245 4029807 3012940..3013260 1 NC_007964.1 arylsulfate sulfotransferase-like protein 3013260 4029807 Nham_2735 Nitrobacter hamburgensis X14 arylsulfate sulfotransferase-like protein YP_577974.1 3012940 D 323097 CDS YP_577975.1 92118246 4029808 complement(3013366..3017193) 1 NC_007964.1 hypothetical protein 3017193 4029808 Nham_2736 Nitrobacter hamburgensis X14 hypothetical protein YP_577975.1 3013366 R 323097 CDS YP_577976.1 92118247 4029809 3017461..3017976 1 NC_007964.1 hypothetical protein 3017976 4029809 Nham_2737 Nitrobacter hamburgensis X14 hypothetical protein YP_577976.1 3017461 D 323097 CDS YP_577977.1 92118248 4029810 complement(3017983..3018156) 1 NC_007964.1 hypothetical protein 3018156 4029810 Nham_2738 Nitrobacter hamburgensis X14 hypothetical protein YP_577977.1 3017983 R 323097 CDS YP_577978.1 92118249 4029811 3018432..3020933 1 NC_007964.1 UvrD/REP helicase 3020933 4029811 Nham_2739 Nitrobacter hamburgensis X14 UvrD/REP helicase YP_577978.1 3018432 D 323097 CDS YP_577979.1 92118250 4029812 3021052..3021972 1 NC_007964.1 ABC transporter 3021972 4029812 Nham_2740 Nitrobacter hamburgensis X14 ABC transporter YP_577979.1 3021052 D 323097 CDS YP_577980.1 92118251 4029813 3021974..3022735 1 NC_007964.1 hypothetical protein 3022735 4029813 Nham_2741 Nitrobacter hamburgensis X14 hypothetical protein YP_577980.1 3021974 D 323097 CDS YP_577981.1 92118252 4029814 complement(3022925..3023266) 1 NC_007964.1 hypothetical protein 3023266 4029814 Nham_2742 Nitrobacter hamburgensis X14 hypothetical protein YP_577981.1 3022925 R 323097 CDS YP_577982.1 92118253 4029815 3023540..3024349 1 NC_007964.1 ErfK/YbiS/YcfS/YnhG 3024349 4029815 Nham_2743 Nitrobacter hamburgensis X14 ErfK/YbiS/YcfS/YnhG YP_577982.1 3023540 D 323097 CDS YP_577983.1 92118254 4029816 3024513..3026120 1 NC_007964.1 FAD dependent oxidoreductase 3026120 4029816 Nham_2744 Nitrobacter hamburgensis X14 FAD dependent oxidoreductase YP_577983.1 3024513 D 323097 CDS YP_577984.1 92118255 4029817 3026906..3027178 1 NC_007964.1 hypothetical protein 3027178 4029817 Nham_2745 Nitrobacter hamburgensis X14 hypothetical protein YP_577984.1 3026906 D 323097 CDS YP_577985.1 92118256 4029818 3027219..3028115 1 NC_007964.1 ribosomal L11 methyltransferase 3028115 4029818 Nham_2746 Nitrobacter hamburgensis X14 ribosomal L11 methyltransferase YP_577985.1 3027219 D 323097 CDS YP_577986.1 92118257 4029819 3028227..3030119 1 NC_007964.1 peptidase M24 3030119 4029819 Nham_2747 Nitrobacter hamburgensis X14 peptidase M24 YP_577986.1 3028227 D 323097 CDS YP_577987.1 92118258 4029820 3030152..3031087 1 NC_007964.1 transposase, IS4 3031087 4029820 Nham_2748 Nitrobacter hamburgensis X14 transposase, IS4 YP_577987.1 3030152 D 323097 CDS YP_577988.1 92118259 4029821 complement(3031892..3032611) 1 NC_007964.1 hypothetical protein 3032611 4029821 Nham_2749 Nitrobacter hamburgensis X14 hypothetical protein YP_577988.1 3031892 R 323097 CDS YP_577989.1 92118260 4029822 complement(3032915..3033124) 1 NC_007964.1 cold-shock DNA-binding domain-containing protein 3033124 4029822 Nham_2750 Nitrobacter hamburgensis X14 cold-shock DNA-binding domain-containing protein YP_577989.1 3032915 R 323097 CDS YP_577990.1 92118261 4029823 3033336..3033620 1 NC_007964.1 hypothetical protein 3033620 4029823 Nham_2751 Nitrobacter hamburgensis X14 hypothetical protein YP_577990.1 3033336 D 323097 CDS YP_577991.1 92118262 4029824 complement(3033844..3035280) 1 NC_007964.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 3035280 4029824 Nham_2752 Nitrobacter hamburgensis X14 S-adenosyl-L-homocysteine hydrolase YP_577991.1 3033844 R 323097 CDS YP_577992.1 92118263 4029825 complement(3035517..3036713) 1 NC_007964.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 3036713 4029825 Nham_2753 Nitrobacter hamburgensis X14 S-adenosylmethionine synthetase YP_577992.1 3035517 R 323097 CDS YP_577993.1 92118264 4029826 complement(3036771..3038123) 1 NC_007964.1 hypothetical protein 3038123 4029826 Nham_2754 Nitrobacter hamburgensis X14 hypothetical protein YP_577993.1 3036771 R 323097 CDS YP_577994.1 92118265 4031186 3038452..3039762 1 NC_007964.1 UDP-glucose 6-dehydrogenase 3039762 4031186 Nham_2755 Nitrobacter hamburgensis X14 UDP-glucose 6-dehydrogenase YP_577994.1 3038452 D 323097 CDS YP_577995.1 92118266 4031188 complement(3040823..3041128) 1 NC_007964.1 hypothetical protein 3041128 4031188 Nham_2757 Nitrobacter hamburgensis X14 hypothetical protein YP_577995.1 3040823 R 323097 CDS YP_577996.1 92118267 4031189 3041314..3042669 1 NC_007964.1 transposase, IS4 3042669 4031189 Nham_2758 Nitrobacter hamburgensis X14 transposase, IS4 YP_577996.1 3041314 D 323097 CDS YP_577997.1 92118268 4031190 complement(3042695..3043219) 1 NC_007964.1 transposase (class II) 3043219 4031190 Nham_2759 Nitrobacter hamburgensis X14 transposase (class II) YP_577997.1 3042695 R 323097 CDS YP_577998.1 92118269 4031191 complement(3043406..3043864) 1 NC_007964.1 hypothetical protein 3043864 4031191 Nham_2760 Nitrobacter hamburgensis X14 hypothetical protein YP_577998.1 3043406 R 323097 CDS YP_577999.1 92118270 4031192 3044102..3044404 1 NC_007964.1 hypothetical protein 3044404 4031192 Nham_2761 Nitrobacter hamburgensis X14 hypothetical protein YP_577999.1 3044102 D 323097 CDS YP_578000.1 92118271 4031193 3044401..3045510 1 NC_007964.1 hypothetical protein 3045510 4031193 Nham_2762 Nitrobacter hamburgensis X14 hypothetical protein YP_578000.1 3044401 D 323097 CDS YP_578001.1 92118272 4031194 3045512..3046435 1 NC_007964.1 glycosyltransferases-like protein 3046435 4031194 Nham_2763 Nitrobacter hamburgensis X14 glycosyltransferases-like protein YP_578001.1 3045512 D 323097 CDS YP_578002.1 92118273 4031195 3046445..3047617 1 NC_007964.1 group 1 glycosyl transferase 3047617 4031195 Nham_2764 Nitrobacter hamburgensis X14 group 1 glycosyl transferase YP_578002.1 3046445 D 323097 CDS YP_578003.1 92118274 4031196 3047635..3048933 1 NC_007964.1 group 1 glycosyl transferase 3048933 4031196 Nham_2765 Nitrobacter hamburgensis X14 group 1 glycosyl transferase YP_578003.1 3047635 D 323097 CDS YP_578004.1 92118275 4031197 3048930..3050627 1 NC_007964.1 hypothetical protein 3050627 4031197 Nham_2766 Nitrobacter hamburgensis X14 hypothetical protein YP_578004.1 3048930 D 323097 CDS YP_578005.1 92118276 4031198 3050667..3051443 1 NC_007964.1 nucleotidyl transferase 3051443 4031198 Nham_2767 Nitrobacter hamburgensis X14 nucleotidyl transferase YP_578005.1 3050667 D 323097 CDS YP_578006.1 92118277 4031199 3051447..3052520 1 NC_007964.1 NAD-dependent epimerase/dehydratase 3052520 4031199 Nham_2768 Nitrobacter hamburgensis X14 NAD-dependent epimerase/dehydratase YP_578006.1 3051447 D 323097 CDS YP_578007.1 92118278 4031200 3052517..3053068 1 NC_007964.1 dTDP-4-dehydrorhamnose 3,5-epimerase 3053068 4031200 Nham_2769 Nitrobacter hamburgensis X14 dTDP-4-dehydrorhamnose 3,5-epimerase YP_578007.1 3052517 D 323097 CDS YP_578008.1 92118279 4031201 3053065..3054291 1 NC_007964.1 methyltransferase type 12 3054291 4031201 Nham_2770 Nitrobacter hamburgensis X14 methyltransferase type 12 YP_578008.1 3053065 D 323097 CDS YP_578009.1 92118280 4031202 3054288..3055133 1 NC_007964.1 NAD-dependent epimerase/dehydratase 3055133 4031202 Nham_2771 Nitrobacter hamburgensis X14 NAD-dependent epimerase/dehydratase YP_578009.1 3054288 D 323097 CDS YP_578010.1 92118281 4031203 3055617..3058520 1 NC_007964.1 group 1 glycosyl transferase 3058520 4031203 Nham_2772 Nitrobacter hamburgensis X14 group 1 glycosyl transferase YP_578010.1 3055617 D 323097 CDS YP_578011.1 92118282 4031204 3058650..3059807 1 NC_007964.1 transposase IS116/IS110/IS902 3059807 4031204 Nham_2773 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_578011.1 3058650 D 323097 CDS YP_578012.1 92118283 4031032 complement(3060067..3060483) 1 NC_007964.1 transposase 3060483 4031032 Nham_2774 Nitrobacter hamburgensis X14 transposase YP_578012.1 3060067 R 323097 CDS YP_578013.1 92118284 4031034 complement(3061004..3062260) 1 NC_007964.1 group 1 glycosyl transferase 3062260 4031034 Nham_2776 Nitrobacter hamburgensis X14 group 1 glycosyl transferase YP_578013.1 3061004 R 323097 CDS YP_578014.1 92118285 4031035 3062709..3063857 1 NC_007964.1 group 1 glycosyl transferase 3063857 4031035 Nham_2777 Nitrobacter hamburgensis X14 group 1 glycosyl transferase YP_578014.1 3062709 D 323097 CDS YP_578015.1 92118286 4031036 3063867..3064724 1 NC_007964.1 hypothetical protein 3064724 4031036 Nham_2778 Nitrobacter hamburgensis X14 hypothetical protein YP_578015.1 3063867 D 323097 CDS YP_578016.1 92118287 4031037 3064731..3065522 1 NC_007964.1 ABC transporter 3065522 4031037 Nham_2779 Nitrobacter hamburgensis X14 ABC transporter YP_578016.1 3064731 D 323097 CDS YP_578017.1 92118288 4031038 3065814..3066803 1 NC_007964.1 GDP-mannose 4,6-dehydratase 3066803 4031038 Nham_2780 Nitrobacter hamburgensis X14 GDP-mannose 4,6-dehydratase YP_578017.1 3065814 D 323097 CDS YP_578018.1 92118289 4031039 3066835..3067779 1 NC_007964.1 NAD-dependent epimerase/dehydratase 3067779 4031039 Nham_2781 Nitrobacter hamburgensis X14 NAD-dependent epimerase/dehydratase YP_578018.1 3066835 D 323097 CDS YP_578019.1 92118290 4031040 3068317..3069729 1 NC_007964.1 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 3069729 4031040 Nham_2782 Nitrobacter hamburgensis X14 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_578019.1 3068317 D 323097 CDS YP_578020.1 92118291 4031043 complement(3070735..3072009) 1 NC_007964.1 transposase, mutator type 3072009 4031043 Nham_2785 Nitrobacter hamburgensis X14 transposase, mutator type YP_578020.1 3070735 R 323097 CDS YP_578021.1 92118292 4031044 complement(3072389..3073141) 1 NC_007964.1 IstB-like ATP-binding protein 3073141 4031044 Nham_2786 Nitrobacter hamburgensis X14 IstB-like ATP-binding protein YP_578021.1 3072389 R 323097 CDS YP_578022.1 92118293 4031046 3073959..3074243 1 NC_007964.1 hypothetical protein 3074243 4031046 Nham_2788 Nitrobacter hamburgensis X14 hypothetical protein YP_578022.1 3073959 D 323097 CDS YP_578023.1 92118294 4031047 3074414..3074887 1 NC_007964.1 hypothetical protein 3074887 4031047 Nham_2789 Nitrobacter hamburgensis X14 hypothetical protein YP_578023.1 3074414 D 323097 CDS YP_578024.1 92118295 4031048 3075146..3077224 1 NC_007964.1 recombinase 3077224 4031048 Nham_2790 Nitrobacter hamburgensis X14 recombinase YP_578024.1 3075146 D 323097 CDS YP_578025.1 92118296 4031049 complement(3077219..3078001) 1 NC_007964.1 TRm23a transposase 3078001 4031049 Nham_2791 Nitrobacter hamburgensis X14 TRm23a transposase YP_578025.1 3077219 R 323097 CDS YP_578026.1 92118297 4031050 3078099..3078548 1 NC_007964.1 IS66 Orf2 like 3078548 4031050 Nham_2792 Nitrobacter hamburgensis X14 IS66 Orf2 like YP_578026.1 3078099 D 323097 CDS YP_578027.1 92118298 4031051 3078601..3080172 1 NC_007964.1 transposase IS66 3080172 4031051 Nham_2793 Nitrobacter hamburgensis X14 transposase IS66 YP_578027.1 3078601 D 323097 CDS YP_578028.1 92118299 4030633 complement(3082229..3083329) 1 NC_007964.1 transposase, mutator type 3083329 4030633 Nham_2796 Nitrobacter hamburgensis X14 transposase, mutator type YP_578028.1 3082229 R 323097 CDS YP_578029.1 92118300 4030634 complement(3083344..3083568) 1 NC_007964.1 phage integrase-like protein SAM-like protein 3083568 4030634 Nham_2797 Nitrobacter hamburgensis X14 phage integrase-like protein SAM-like protein YP_578029.1 3083344 R 323097 CDS YP_578030.1 92118301 4030635 complement(3083707..3084564) 1 NC_007964.1 NAD-dependent epimerase/dehydratase 3084564 4030635 Nham_2798 Nitrobacter hamburgensis X14 NAD-dependent epimerase/dehydratase YP_578030.1 3083707 R 323097 CDS YP_578031.1 92118302 4030636 complement(3084702..3086603) 1 NC_007964.1 polysaccharide biosynthesis protein CapD 3086603 4030636 Nham_2799 Nitrobacter hamburgensis X14 polysaccharide biosynthesis protein CapD YP_578031.1 3084702 R 323097 CDS YP_578032.1 92118303 4030638 3087967..3089271 1 NC_007964.1 O-antigen polymerase 3089271 4030638 Nham_2801 Nitrobacter hamburgensis X14 O-antigen polymerase YP_578032.1 3087967 D 323097 CDS YP_578033.1 92118304 4030639 3089425..3090426 1 NC_007964.1 glycosyl transferase family protein 3090426 4030639 Nham_2802 Nitrobacter hamburgensis X14 glycosyl transferase family protein YP_578033.1 3089425 D 323097 CDS YP_578034.1 92118305 4030640 3090598..3091143 1 NC_007964.1 hypothetical protein 3091143 4030640 Nham_2803 Nitrobacter hamburgensis X14 hypothetical protein YP_578034.1 3090598 D 323097 CDS YP_578035.1 92118306 4030641 complement(3091097..3092296) 1 NC_007964.1 serine--glyoxylate transaminase 3092296 4030641 Nham_2804 Nitrobacter hamburgensis X14 serine--glyoxylate transaminase YP_578035.1 3091097 R 323097 CDS YP_578036.1 92118307 4030642 3092547..3092816 1 NC_007964.1 hypothetical protein 3092816 4030642 Nham_2805 Nitrobacter hamburgensis X14 hypothetical protein YP_578036.1 3092547 D 323097 CDS YP_578037.1 92118308 4030643 3092922..3093137 1 NC_007964.1 hypothetical protein 3093137 4030643 Nham_2806 Nitrobacter hamburgensis X14 hypothetical protein YP_578037.1 3092922 D 323097 CDS YP_578038.1 92118309 4030644 3093229..3093666 1 NC_007964.1 histidine triad (HIT) protein 3093666 4030644 Nham_2807 Nitrobacter hamburgensis X14 histidine triad (HIT) protein YP_578038.1 3093229 D 323097 CDS YP_578039.1 92118310 4030645 complement(3093903..3094601) 1 NC_007964.1 ABC transporter 3094601 4030645 Nham_2808 Nitrobacter hamburgensis X14 ABC transporter YP_578039.1 3093903 R 323097 CDS YP_578040.1 92118311 4030646 complement(3094598..3096475) 1 NC_007964.1 ABC transporter 3096475 4030646 Nham_2809 Nitrobacter hamburgensis X14 ABC transporter YP_578040.1 3094598 R 323097 CDS YP_578041.1 92118312 4030647 complement(3096488..3097363) 1 NC_007964.1 inner-membrane translocator 3097363 4030647 Nham_2810 Nitrobacter hamburgensis X14 inner-membrane translocator YP_578041.1 3096488 R 323097 CDS YP_578042.1 92118313 4030648 complement(3097487..3098839) 1 NC_007964.1 twin-arginine translocation pathway signal 3098839 4030648 Nham_2811 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_578042.1 3097487 R 323097 CDS YP_578043.1 92118314 4030649 complement(3099172..3099903) 1 NC_007964.1 Crp/FNR family transcriptional regulator 3099903 4030649 Nham_2812 Nitrobacter hamburgensis X14 Crp/FNR family transcriptional regulator YP_578043.1 3099172 R 323097 CDS YP_578044.1 92118315 4032455 3100037..3100513 1 NC_007964.1 hypothetical protein 3100513 4032455 Nham_2813 Nitrobacter hamburgensis X14 hypothetical protein YP_578044.1 3100037 D 323097 CDS YP_578045.1 92118316 4032456 complement(3100553..3101812) 1 NC_007964.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 3101812 4032456 Nham_2814 Nitrobacter hamburgensis X14 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_578045.1 3100553 R 323097 CDS YP_578046.1 92118317 4032457 complement(3101812..3102450) 1 NC_007964.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 3102450 bioD 4032457 bioD Nitrobacter hamburgensis X14 dithiobiotin synthetase YP_578046.1 3101812 R 323097 CDS YP_578047.1 92118318 4032458 complement(3102447..3103580) 1 NC_007964.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 3103580 4032458 Nham_2816 Nitrobacter hamburgensis X14 8-amino-7-oxononanoate synthase YP_578047.1 3102447 R 323097 CDS YP_578048.1 92118319 4032459 complement(3103730..3104059) 1 NC_007964.1 stress responsive alpha-beta barrel 3104059 4032459 Nham_2817 Nitrobacter hamburgensis X14 stress responsive alpha-beta barrel YP_578048.1 3103730 R 323097 CDS YP_578049.1 92118320 4032460 3104314..3105264 1 NC_007964.1 hypothetical protein 3105264 4032460 Nham_2818 Nitrobacter hamburgensis X14 hypothetical protein YP_578049.1 3104314 D 323097 CDS YP_578050.1 92118321 4032461 3105316..3106299 1 NC_007964.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 3106299 4032461 Nham_2819 Nitrobacter hamburgensis X14 quinolinate synthetase YP_578050.1 3105316 D 323097 CDS YP_578051.1 92118322 4032462 3106305..3107825 1 NC_007964.1 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 3107825 4032462 Nham_2820 Nitrobacter hamburgensis X14 L-aspartate oxidase YP_578051.1 3106305 D 323097 CDS YP_578052.1 92118323 4032463 3107839..3108702 1 NC_007964.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 3108702 4032463 Nham_2821 Nitrobacter hamburgensis X14 nicotinate-nucleotide pyrophosphorylase YP_578052.1 3107839 D 323097 CDS YP_578053.1 92118324 4032464 complement(3109001..3109264) 1 NC_007964.1 hypothetical protein 3109264 4032464 Nham_2822 Nitrobacter hamburgensis X14 hypothetical protein YP_578053.1 3109001 R 323097 CDS YP_578054.1 92118325 4032465 complement(3109839..3110837) 1 NC_007964.1 AraC family transcriptional regulator 3110837 4032465 Nham_2823 Nitrobacter hamburgensis X14 AraC family transcriptional regulator YP_578054.1 3109839 R 323097 CDS YP_578055.1 92118326 4032466 3110990..3111796 1 NC_007964.1 hypothetical protein 3111796 4032466 Nham_2824 Nitrobacter hamburgensis X14 hypothetical protein YP_578055.1 3110990 D 323097 CDS YP_578056.1 92118327 4032467 3111824..3112630 1 NC_007964.1 hypothetical protein 3112630 4032467 Nham_2825 Nitrobacter hamburgensis X14 hypothetical protein YP_578056.1 3111824 D 323097 CDS YP_578057.1 92118328 4032468 3112623..3113927 1 NC_007964.1 twin-arginine translocation pathway signal 3113927 4032468 Nham_2826 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_578057.1 3112623 D 323097 CDS YP_578058.1 92118329 4032469 3113927..3114907 1 NC_007964.1 hypothetical protein 3114907 4032469 Nham_2827 Nitrobacter hamburgensis X14 hypothetical protein YP_578058.1 3113927 D 323097 CDS YP_578059.1 92118330 4032470 3114919..3116592 1 NC_007964.1 hypothetical protein 3116592 4032470 Nham_2828 Nitrobacter hamburgensis X14 hypothetical protein YP_578059.1 3114919 D 323097 CDS YP_578060.1 92118331 4032471 3116735..3117145 1 NC_007964.1 hypothetical protein 3117145 4032471 Nham_2829 Nitrobacter hamburgensis X14 hypothetical protein YP_578060.1 3116735 D 323097 CDS YP_578061.1 92118332 4032472 complement(3117154..3120612) 1 NC_007964.1 hypothetical protein 3120612 4032472 Nham_2830 Nitrobacter hamburgensis X14 hypothetical protein YP_578061.1 3117154 R 323097 CDS YP_578062.1 92118333 4032473 complement(3120609..3121835) 1 NC_007964.1 metallophosphoesterase 3121835 4032473 Nham_2831 Nitrobacter hamburgensis X14 metallophosphoesterase YP_578062.1 3120609 R 323097 CDS YP_578063.1 92118334 4032474 3122240..3124165 1 NC_007964.1 hypothetical protein 3124165 4032474 Nham_2832 Nitrobacter hamburgensis X14 hypothetical protein YP_578063.1 3122240 D 323097 CDS YP_578064.1 92118335 4030728 3125189..3126727 1 NC_007964.1 filamentation induced by cAMP protein fic 3126727 4030728 Nham_2833 Nitrobacter hamburgensis X14 filamentation induced by cAMP protein fic YP_578064.1 3125189 D 323097 CDS YP_578065.1 92118336 4030729 3127037..3128131 1 NC_007964.1 tISRso5; ISRSO5-transposase protein 3128131 4030729 Nham_2834 Nitrobacter hamburgensis X14 tISRso5; ISRSO5-transposase protein YP_578065.1 3127037 D 323097 CDS YP_578066.1 92118337 4030730 complement(3128094..3128513) 1 NC_007964.1 hypothetical protein 3128513 4030730 Nham_2835 Nitrobacter hamburgensis X14 hypothetical protein YP_578066.1 3128094 R 323097 CDS YP_578067.1 92118338 4030732 3128829..3129392 1 NC_007964.1 hypothetical protein 3129392 4030732 Nham_2837 Nitrobacter hamburgensis X14 hypothetical protein YP_578067.1 3128829 D 323097 CDS YP_578068.1 92118339 4030733 complement(3129522..3130433) 1 NC_007964.1 zinc finger, SWIM-type 3130433 4030733 Nham_2838 Nitrobacter hamburgensis X14 zinc finger, SWIM-type YP_578068.1 3129522 R 323097 CDS YP_578069.1 92118340 4030734 complement(3130430..3133138) 1 NC_007964.1 SNF2-like protein 3133138 4030734 Nham_2839 Nitrobacter hamburgensis X14 SNF2-like protein YP_578069.1 3130430 R 323097 CDS YP_578070.1 92118341 4030735 complement(3133220..3133597) 1 NC_007964.1 hypothetical protein 3133597 4030735 Nham_2840 Nitrobacter hamburgensis X14 hypothetical protein YP_578070.1 3133220 R 323097 CDS YP_578071.1 92118342 4030736 complement(3133607..3135808) 1 NC_007964.1 helicase RecD/TraA 3135808 4030736 Nham_2841 Nitrobacter hamburgensis X14 helicase RecD/TraA YP_578071.1 3133607 R 323097 CDS YP_578072.1 92118343 4030737 3136049..3136444 1 NC_007964.1 hypothetical protein 3136444 4030737 Nham_2842 Nitrobacter hamburgensis X14 hypothetical protein YP_578072.1 3136049 D 323097 CDS YP_578073.1 92118344 4030739 3137050..3137322 1 NC_007964.1 hypothetical protein 3137322 4030739 Nham_2844 Nitrobacter hamburgensis X14 hypothetical protein YP_578073.1 3137050 D 323097 CDS YP_578074.1 92118345 4030740 3137779..3138720 1 NC_007964.1 hypothetical protein 3138720 4030740 Nham_2845 Nitrobacter hamburgensis X14 hypothetical protein YP_578074.1 3137779 D 323097 CDS YP_578075.1 92118346 4030741 complement(3139688..3139909) 1 NC_007964.1 cold-shock DNA-binding domain-containing protein 3139909 4030741 Nham_2846 Nitrobacter hamburgensis X14 cold-shock DNA-binding domain-containing protein YP_578075.1 3139688 R 323097 CDS YP_578076.1 92118347 4030743 complement(3141837..3142217) 1 NC_007964.1 hypothetical protein 3142217 4030743 Nham_2848 Nitrobacter hamburgensis X14 hypothetical protein YP_578076.1 3141837 R 323097 CDS YP_578077.1 92118348 4030744 complement(3142276..3142698) 1 NC_007964.1 twin-arginine translocation pathway signal 3142698 4030744 Nham_2849 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_578077.1 3142276 R 323097 CDS YP_578078.1 92118349 4030745 complement(3144236..3144928) 1 NC_007964.1 hypothetical protein 3144928 4030745 Nham_2850 Nitrobacter hamburgensis X14 hypothetical protein YP_578078.1 3144236 R 323097 CDS YP_578079.1 92118350 4030746 3145309..3145590 1 NC_007964.1 plasmid maintenance system killer protein 3145590 4030746 Nham_2851 Nitrobacter hamburgensis X14 plasmid maintenance system killer protein YP_578079.1 3145309 D 323097 CDS YP_578080.1 92118351 4029407 3145613..3145915 1 NC_007964.1 XRE family plasmid maintenance system antidote protein 3145915 4029407 Nham_2852 Nitrobacter hamburgensis X14 XRE family plasmid maintenance system antidote protein YP_578080.1 3145613 D 323097 CDS YP_578081.1 92118352 4029408 3146106..3146453 1 NC_007964.1 hypothetical protein 3146453 4029408 Nham_2853 Nitrobacter hamburgensis X14 hypothetical protein YP_578081.1 3146106 D 323097 CDS YP_578082.1 92118353 4029409 complement(3146474..3146806) 1 NC_007964.1 hypothetical protein 3146806 4029409 Nham_2854 Nitrobacter hamburgensis X14 hypothetical protein YP_578082.1 3146474 R 323097 CDS YP_578083.1 92118354 4029410 3147035..3147421 1 NC_007964.1 ribonuclease H 3147421 4029410 Nham_2855 Nitrobacter hamburgensis X14 ribonuclease H YP_578083.1 3147035 D 323097 CDS YP_578084.1 92118355 4029411 3147418..3147666 1 NC_007964.1 hypothetical protein 3147666 4029411 Nham_2856 Nitrobacter hamburgensis X14 hypothetical protein YP_578084.1 3147418 D 323097 CDS YP_578085.1 92118356 4029412 3147919..3148998 1 NC_007964.1 phage integrase 3148998 4029412 Nham_2857 Nitrobacter hamburgensis X14 phage integrase YP_578085.1 3147919 D 323097 CDS YP_578086.1 92118357 4029414 complement(3149148..3149480) 1 NC_007964.1 hypothetical protein 3149480 4029414 Nham_2858 Nitrobacter hamburgensis X14 hypothetical protein YP_578086.1 3149148 R 323097 CDS YP_578087.1 92118358 4029415 3149758..3150552 1 NC_007964.1 pseudouridine synthase RluD 3150552 4029415 Nham_2859 Nitrobacter hamburgensis X14 pseudouridine synthase RluD YP_578087.1 3149758 D 323097 CDS YP_578088.1 92118359 4029416 3150769..3151668 1 NC_007964.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 3151668 4029416 Nham_2860 Nitrobacter hamburgensis X14 RNA polymerase factor sigma-32 YP_578088.1 3150769 D 323097 CDS YP_578089.1 92118360 4029417 complement(3151988..3153253) 1 NC_007964.1 diguanylate cyclase 3153253 4029417 Nham_2861 Nitrobacter hamburgensis X14 diguanylate cyclase YP_578089.1 3151988 R 323097 CDS YP_578090.1 92118361 4029418 complement(3153834..3154652) 1 NC_007964.1 lytic murein transglycosylase 3154652 4029418 Nham_2862 Nitrobacter hamburgensis X14 lytic murein transglycosylase YP_578090.1 3153834 R 323097 CDS YP_578091.1 92118362 4029419 3154694..3155071 1 NC_007964.1 hypothetical protein 3155071 4029419 Nham_2863 Nitrobacter hamburgensis X14 hypothetical protein YP_578091.1 3154694 D 323097 CDS YP_578092.1 92118363 4029420 3155553..3156884 1 NC_007964.1 twin-arginine translocation pathway signal 3156884 4029420 Nham_2864 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_578092.1 3155553 D 323097 CDS YP_578093.1 92118364 4029421 3156891..3157619 1 NC_007964.1 hypothetical protein 3157619 4029421 Nham_2865 Nitrobacter hamburgensis X14 hypothetical protein YP_578093.1 3156891 D 323097 CDS YP_578094.1 92118365 4029422 complement(3157852..3160005) 1 NC_007964.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 3160005 4029422 Nham_2866 Nitrobacter hamburgensis X14 RNA polymerase sigma factor RpoD YP_578094.1 3157852 R 323097 CDS YP_578095.1 92118366 4029423 complement(3160757..3162658) 1 NC_007964.1 synthesizes RNA primers at the replication forks; DNA primase 3162658 dnaG 4029423 dnaG Nitrobacter hamburgensis X14 DNA primase YP_578095.1 3160757 R 323097 CDS YP_578096.1 92118367 4029424 3162947..3163795 1 NC_007964.1 N-formylglutamate amidohydrolase 3163795 4029424 Nham_2868 Nitrobacter hamburgensis X14 N-formylglutamate amidohydrolase YP_578096.1 3162947 D 323097 CDS YP_578097.1 92118368 4029425 complement(3163882..3164046) 1 NC_007964.1 hypothetical protein 3164046 4029425 Nham_2869 Nitrobacter hamburgensis X14 hypothetical protein YP_578097.1 3163882 R 323097 CDS YP_578098.1 92118369 4032881 complement(3164377..3164832) 1 NC_007964.1 hypothetical protein 3164832 4032881 Nham_2870 Nitrobacter hamburgensis X14 hypothetical protein YP_578098.1 3164377 R 323097 CDS YP_578099.1 92118370 4032882 3164959..3166149 1 NC_007964.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 3166149 4032882 Nham_2871 Nitrobacter hamburgensis X14 carbamoyl phosphate synthase small subunit YP_578099.1 3164959 D 323097 CDS YP_578100.1 92118371 4032883 complement(3166322..3166861) 1 NC_007964.1 Ferritin and Dps 3166861 4032883 Nham_2872 Nitrobacter hamburgensis X14 Ferritin and Dps YP_578100.1 3166322 R 323097 CDS YP_578101.1 92118372 4032884 3167031..3167756 1 NC_007964.1 methyltransferase type 12 3167756 4032884 Nham_2873 Nitrobacter hamburgensis X14 methyltransferase type 12 YP_578101.1 3167031 D 323097 CDS YP_578102.1 92118373 4032888 complement(3168606..3169037) 1 NC_007964.1 hypothetical protein 3169037 4032888 Nham_2874 Nitrobacter hamburgensis X14 hypothetical protein YP_578102.1 3168606 R 323097 CDS YP_578103.1 92118374 4032889 3169384..3172848 1 NC_007964.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 3172848 carB 4032889 carB Nitrobacter hamburgensis X14 carbamoyl phosphate synthase large subunit YP_578103.1 3169384 D 323097 CDS YP_578104.1 92118375 4032890 3173354..3173830 1 NC_007964.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 3173830 greA 4032890 greA Nitrobacter hamburgensis X14 transcription elongation factor GreA YP_578104.1 3173354 D 323097 CDS YP_578105.1 92118376 4032891 complement(3173961..3174377) 1 NC_007964.1 hypothetical protein 3174377 4032891 Nham_2877 Nitrobacter hamburgensis X14 hypothetical protein YP_578105.1 3173961 R 323097 CDS YP_578106.1 92118377 4032892 3174395..3174793 1 NC_007964.1 DoxX protein 3174793 4032892 Nham_2878 Nitrobacter hamburgensis X14 DoxX protein YP_578106.1 3174395 D 323097 CDS YP_578107.1 92118378 4032893 complement(3174872..3175351) 1 NC_007964.1 AsnC family transcriptional regulator 3175351 4032893 Nham_2879 Nitrobacter hamburgensis X14 AsnC family transcriptional regulator YP_578107.1 3174872 R 323097 CDS YP_578108.1 92118379 4032894 3175622..3176587 1 NC_007964.1 thioredoxin reductase 3176587 4032894 Nham_2880 Nitrobacter hamburgensis X14 thioredoxin reductase YP_578108.1 3175622 D 323097 CDS YP_578109.1 92118380 4032895 3176590..3177513 1 NC_007964.1 LysR family transcriptional regulator 3177513 4032895 Nham_2881 Nitrobacter hamburgensis X14 LysR family transcriptional regulator YP_578109.1 3176590 D 323097 CDS YP_578110.1 92118381 4032896 complement(3177766..3178446) 1 NC_007964.1 cobyrinic acid a,c-diamide synthase 3178446 4032896 Nham_2882 Nitrobacter hamburgensis X14 cobyrinic acid a,c-diamide synthase YP_578110.1 3177766 R 323097 CDS YP_578111.1 92118382 4033187 complement(3178614..3178925) 1 NC_007964.1 hypothetical protein 3178925 4033187 Nham_2883 Nitrobacter hamburgensis X14 hypothetical protein YP_578111.1 3178614 R 323097 CDS YP_578112.1 92118383 4033188 complement(3179167..3179343) 1 NC_007964.1 hypothetical protein 3179343 4033188 Nham_2884 Nitrobacter hamburgensis X14 hypothetical protein YP_578112.1 3179167 R 323097 CDS YP_578113.1 92118384 4033190 complement(3180050..3181255) 1 NC_007964.1 extensin-like protein 3181255 4033190 Nham_2885 Nitrobacter hamburgensis X14 extensin-like protein YP_578113.1 3180050 R 323097 CDS YP_578114.1 92118385 4033191 3181792..3183348 1 NC_007964.1 hypothetical protein 3183348 4033191 Nham_2886 Nitrobacter hamburgensis X14 hypothetical protein YP_578114.1 3181792 D 323097 CDS YP_578115.1 92118386 4033192 complement(3183429..3183641) 1 NC_007964.1 hypothetical protein 3183641 4033192 Nham_2887 Nitrobacter hamburgensis X14 hypothetical protein YP_578115.1 3183429 R 323097 CDS YP_578116.1 92118387 4033193 complement(3183786..3184310) 1 NC_007964.1 PRC-barrel 3184310 4033193 Nham_2888 Nitrobacter hamburgensis X14 PRC-barrel YP_578116.1 3183786 R 323097 CDS YP_578117.1 92118388 4033194 complement(3184682..3184882) 1 NC_007964.1 hypothetical protein 3184882 4033194 Nham_2889 Nitrobacter hamburgensis X14 hypothetical protein YP_578117.1 3184682 R 323097 CDS YP_578118.1 92118389 4033195 3185127..3185603 1 NC_007964.1 lytic transglycosylase, catalytic 3185603 4033195 Nham_2890 Nitrobacter hamburgensis X14 lytic transglycosylase, catalytic YP_578118.1 3185127 D 323097 CDS YP_578119.1 92118390 4033197 3185784..3186800 1 NC_007964.1 glycine oxidase ThiO 3186800 4033197 Nham_2891 Nitrobacter hamburgensis X14 glycine oxidase ThiO YP_578119.1 3185784 D 323097 CDS YP_578120.1 92118391 4033198 3186805..3187002 1 NC_007964.1 thiamine biosynthesis protein ThiS 3187002 4033198 Nham_2892 Nitrobacter hamburgensis X14 thiamine biosynthesis protein ThiS YP_578120.1 3186805 D 323097 CDS YP_578121.1 92118392 4033199 3187013..3187795 1 NC_007964.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 3187795 thiG 4033199 thiG Nitrobacter hamburgensis X14 thiazole synthase YP_578121.1 3187013 D 323097 CDS YP_578122.1 92118393 4033200 3187782..3188408 1 NC_007964.1 thiamine-phosphate diphosphorylase 3188408 4033200 Nham_2894 Nitrobacter hamburgensis X14 thiamine-phosphate diphosphorylase YP_578122.1 3187782 D 323097 CDS YP_578123.1 92118394 4033201 3188418..3188804 1 NC_007964.1 hypothetical protein 3188804 4033201 Nham_2895 Nitrobacter hamburgensis X14 hypothetical protein YP_578123.1 3188418 D 323097 CDS YP_578124.1 92118395 4033202 3188833..3190764 1 NC_007964.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 3190764 4033202 Nham_2896 Nitrobacter hamburgensis X14 thiamine biosynthesis protein ThiC YP_578124.1 3188833 D 323097 CDS YP_578125.1 92118396 4033203 complement(3190995..3191405) 1 NC_007964.1 hypothetical protein 3191405 4033203 Nham_2897 Nitrobacter hamburgensis X14 hypothetical protein YP_578125.1 3190995 R 323097 CDS YP_578126.1 92118397 4033204 complement(3191474..3191908) 1 NC_007964.1 hypothetical protein 3191908 4033204 Nham_2898 Nitrobacter hamburgensis X14 hypothetical protein YP_578126.1 3191474 R 323097 CDS YP_578127.1 92118398 4032708 3192122..3192541 1 NC_007964.1 hypothetical protein 3192541 4032708 Nham_2899 Nitrobacter hamburgensis X14 hypothetical protein YP_578127.1 3192122 D 323097 CDS YP_578128.1 92118399 4032709 3192546..3193034 1 NC_007964.1 hypothetical protein 3193034 4032709 Nham_2900 Nitrobacter hamburgensis X14 hypothetical protein YP_578128.1 3192546 D 323097 CDS YP_578129.1 92118400 4032710 3193236..3193490 1 NC_007964.1 response regulator receiver domain-containing protein 3193490 4032710 Nham_2901 Nitrobacter hamburgensis X14 response regulator receiver domain-containing protein YP_578129.1 3193236 D 323097 CDS YP_578130.1 92118401 4032711 3193816..3195909 1 NC_007964.1 oligopeptidase B 3195909 4032711 Nham_2902 Nitrobacter hamburgensis X14 oligopeptidase B YP_578130.1 3193816 D 323097 CDS YP_578131.1 92118402 4032712 complement(3195971..3196453) 1 NC_007964.1 bacterioferritin 3196453 4032712 Nham_2903 Nitrobacter hamburgensis X14 bacterioferritin YP_578131.1 3195971 R 323097 CDS YP_578132.1 92118403 4032713 complement(3196632..3196889) 1 NC_007964.1 bacterioferritin 3196889 4032713 Nham_2904 Nitrobacter hamburgensis X14 bacterioferritin YP_578132.1 3196632 R 323097 CDS YP_578133.1 92118404 4032714 3197184..3197507 1 NC_007964.1 hypothetical protein 3197507 4032714 Nham_2905 Nitrobacter hamburgensis X14 hypothetical protein YP_578133.1 3197184 D 323097 CDS YP_578134.1 92118405 4032715 3197742..3198026 1 NC_007964.1 hypothetical protein 3198026 4032715 Nham_2906 Nitrobacter hamburgensis X14 hypothetical protein YP_578134.1 3197742 D 323097 CDS YP_578135.1 92118406 4032716 complement(3198102..3199361) 1 NC_007964.1 lytic murein transglycosylase 3199361 4032716 Nham_2907 Nitrobacter hamburgensis X14 lytic murein transglycosylase YP_578135.1 3198102 R 323097 CDS YP_578136.1 92118407 4032717 complement(3199364..3199957) 1 NC_007964.1 hypothetical protein 3199957 4032717 Nham_2908 Nitrobacter hamburgensis X14 hypothetical protein YP_578136.1 3199364 R 323097 CDS YP_578137.1 92118408 4032718 complement(3200073..3200843) 1 NC_007964.1 catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate; trans-aconitate 2-methyltransferase 3200843 4032718 Nham_2909 Nitrobacter hamburgensis X14 trans-aconitate 2-methyltransferase YP_578137.1 3200073 R 323097 CDS YP_578138.1 92118409 4032719 complement(3200952..3202934) 1 NC_007964.1 hypothetical protein 3202934 4032719 Nham_2910 Nitrobacter hamburgensis X14 hypothetical protein YP_578138.1 3200952 R 323097 CDS YP_578139.1 92118410 4032720 complement(3203049..3204701) 1 NC_007964.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 3204701 4032720 Nham_2911 Nitrobacter hamburgensis X14 ABC transporter ATP-binding protein YP_578139.1 3203049 R 323097 CDS YP_578140.1 92118411 4032721 3204935..3205141 1 NC_007964.1 hypothetical protein 3205141 4032721 Nham_2912 Nitrobacter hamburgensis X14 hypothetical protein YP_578140.1 3204935 D 323097 CDS YP_578141.1 92118412 4032723 complement(3205697..3206761) 1 NC_007964.1 ErfK/YbiS/YcfS/YnhG 3206761 4032723 Nham_2914 Nitrobacter hamburgensis X14 ErfK/YbiS/YcfS/YnhG YP_578141.1 3205697 R 323097 CDS YP_578142.1 92118413 4032724 3207050..3207799 1 NC_007964.1 hypothetical protein 3207799 4032724 Nham_2915 Nitrobacter hamburgensis X14 hypothetical protein YP_578142.1 3207050 D 323097 CDS YP_578143.1 92118414 4032725 complement(3207806..3208666) 1 NC_007964.1 3-mercaptopyruvate sulfurtransferase 3208666 4032725 Nham_2916 Nitrobacter hamburgensis X14 3-mercaptopyruvate sulfurtransferase YP_578143.1 3207806 R 323097 CDS YP_578144.1 92118415 4032726 complement(3208867..3209280) 1 NC_007964.1 rhodanese-like protein 3209280 4032726 Nham_2917 Nitrobacter hamburgensis X14 rhodanese-like protein YP_578144.1 3208867 R 323097 CDS YP_578145.1 92118416 4031258 3209569..3209814 1 NC_007964.1 transglycosylase-associated protein 3209814 4031258 Nham_2918 Nitrobacter hamburgensis X14 transglycosylase-associated protein YP_578145.1 3209569 D 323097 CDS YP_578146.1 92118417 4031259 complement(3209865..3210458) 1 NC_007964.1 N-acetyltransferase GCN5 3210458 4031259 Nham_2919 Nitrobacter hamburgensis X14 N-acetyltransferase GCN5 YP_578146.1 3209865 R 323097 CDS YP_578147.1 92118418 4031260 complement(3210678..3211034) 1 NC_007964.1 hypothetical protein 3211034 4031260 Nham_2920 Nitrobacter hamburgensis X14 hypothetical protein YP_578147.1 3210678 R 323097 CDS YP_578148.1 92118419 4031261 3211386..3212186 1 NC_007964.1 hypothetical protein 3212186 4031261 Nham_2921 Nitrobacter hamburgensis X14 hypothetical protein YP_578148.1 3211386 D 323097 CDS YP_578149.1 92118420 4031262 3212266..3212502 1 NC_007964.1 hypothetical protein 3212502 4031262 Nham_2922 Nitrobacter hamburgensis X14 hypothetical protein YP_578149.1 3212266 D 323097 CDS YP_578150.1 92118421 4031263 3212573..3215608 1 NC_007964.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 3215608 4031263 Nham_2923 Nitrobacter hamburgensis X14 excinuclease ABC subunit B YP_578150.1 3212573 D 323097 CDS YP_578151.1 92118422 4031264 3215805..3216305 1 NC_007964.1 hypothetical protein 3216305 4031264 Nham_2924 Nitrobacter hamburgensis X14 hypothetical protein YP_578151.1 3215805 D 323097 CDS YP_578152.1 92118423 4031265 3216298..3217530 1 NC_007964.1 hypothetical protein 3217530 4031265 Nham_2925 Nitrobacter hamburgensis X14 hypothetical protein YP_578152.1 3216298 D 323097 CDS YP_578153.1 92118424 4031266 3217747..3218091 1 NC_007964.1 hypothetical protein 3218091 4031266 Nham_2926 Nitrobacter hamburgensis X14 hypothetical protein YP_578153.1 3217747 D 323097 CDS YP_578154.1 92118425 4031267 complement(3218097..3218420) 1 NC_007964.1 hypothetical protein 3218420 4031267 Nham_2927 Nitrobacter hamburgensis X14 hypothetical protein YP_578154.1 3218097 R 323097 CDS YP_578155.1 92118426 4031268 3218482..3219420 1 NC_007964.1 hypothetical protein 3219420 4031268 Nham_2928 Nitrobacter hamburgensis X14 hypothetical protein YP_578155.1 3218482 D 323097 CDS YP_578156.1 92118427 4031269 3219586..3220008 1 NC_007964.1 hypothetical protein 3220008 4031269 Nham_2929 Nitrobacter hamburgensis X14 hypothetical protein YP_578156.1 3219586 D 323097 CDS YP_578157.1 92118428 4031271 complement(3220289..3220762) 1 NC_007964.1 transposase 3220762 4031271 Nham_2931 Nitrobacter hamburgensis X14 transposase YP_578157.1 3220289 R 323097 CDS YP_578158.1 92118429 4031272 3220933..3221295 1 NC_007964.1 hypothetical protein 3221295 4031272 Nham_2932 Nitrobacter hamburgensis X14 hypothetical protein YP_578158.1 3220933 D 323097 CDS YP_578159.1 92118430 4031273 3221496..3222710 1 NC_007964.1 response regulator receiver/diguanylate phosphodiesterase 3222710 4031273 Nham_2933 Nitrobacter hamburgensis X14 response regulator receiver/diguanylate phosphodiesterase YP_578159.1 3221496 D 323097 CDS YP_578160.1 92118431 4031274 complement(3223152..3224183) 1 NC_007964.1 transposase IS116/IS110/IS902 3224183 4031274 Nham_2934 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_578160.1 3223152 R 323097 CDS YP_578161.1 92118432 4031275 complement(3224218..3224451) 1 NC_007964.1 hypothetical protein 3224451 4031275 Nham_2935 Nitrobacter hamburgensis X14 hypothetical protein YP_578161.1 3224218 R 323097 CDS YP_578162.1 92118433 4031276 3224870..3225922 1 NC_007964.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 3225922 hemE 4031276 hemE Nitrobacter hamburgensis X14 uroporphyrinogen decarboxylase YP_578162.1 3224870 D 323097 CDS YP_578163.1 92118434 4031277 complement(3226106..3226399) 1 NC_007964.1 SirA-like protein 3226399 4031277 Nham_2937 Nitrobacter hamburgensis X14 SirA-like protein YP_578163.1 3226106 R 323097 CDS YP_578164.1 92118435 4031071 complement(3226530..3227069) 1 NC_007964.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 3227069 4031071 Nham_2938 Nitrobacter hamburgensis X14 methionine sulfoxide reductase A YP_578164.1 3226530 R 323097 CDS YP_578165.1 92118436 4031072 3227436..3227666 1 NC_007964.1 hypothetical protein 3227666 4031072 Nham_2939 Nitrobacter hamburgensis X14 hypothetical protein YP_578165.1 3227436 D 323097 CDS YP_578166.1 92118437 4031073 complement(3228152..3228625) 1 NC_007964.1 hypothetical protein 3228625 4031073 Nham_2940 Nitrobacter hamburgensis X14 hypothetical protein YP_578166.1 3228152 R 323097 CDS YP_578167.1 92118438 4031074 3229167..3230714 1 NC_007964.1 tyrosinase 3230714 4031074 Nham_2941 Nitrobacter hamburgensis X14 tyrosinase YP_578167.1 3229167 D 323097 CDS YP_578168.1 92118439 4031075 3230738..3231190 1 NC_007964.1 hypothetical protein 3231190 4031075 Nham_2942 Nitrobacter hamburgensis X14 hypothetical protein YP_578168.1 3230738 D 323097 CDS YP_578169.1 92118440 4031076 complement(3231287..3232342) 1 NC_007964.1 two component LuxR family transcriptional regulator 3232342 4031076 Nham_2943 Nitrobacter hamburgensis X14 two component LuxR family transcriptional regulator YP_578169.1 3231287 R 323097 CDS YP_578170.1 92118441 4031077 complement(3232557..3233090) 1 NC_007964.1 hypothetical protein 3233090 4031077 Nham_2944 Nitrobacter hamburgensis X14 hypothetical protein YP_578170.1 3232557 R 323097 CDS YP_578171.1 92118442 4031078 3233253..3233804 1 NC_007964.1 hypothetical protein 3233804 4031078 Nham_2945 Nitrobacter hamburgensis X14 hypothetical protein YP_578171.1 3233253 D 323097 CDS YP_578172.1 92118443 4031079 3234095..3234967 1 NC_007964.1 hypothetical protein 3234967 4031079 Nham_2946 Nitrobacter hamburgensis X14 hypothetical protein YP_578172.1 3234095 D 323097 CDS YP_578173.1 92118444 4031080 3235113..3237032 1 NC_007964.1 hypothetical protein 3237032 4031080 Nham_2947 Nitrobacter hamburgensis X14 hypothetical protein YP_578173.1 3235113 D 323097 CDS YP_578174.1 92118445 4031081 3237074..3239089 1 NC_007964.1 Type I secretion system ATPase, PrtD 3239089 4031081 Nham_2948 Nitrobacter hamburgensis X14 Type I secretion system ATPase, PrtD YP_578174.1 3237074 D 323097 CDS YP_578175.1 92118446 4031082 3239128..3240471 1 NC_007964.1 Type I secretion membrane fusion protein, HlyD 3240471 4031082 Nham_2949 Nitrobacter hamburgensis X14 Type I secretion membrane fusion protein, HlyD YP_578175.1 3239128 D 323097 CDS YP_578176.1 92118447 4031084 complement(3241141..3241659) 1 NC_007964.1 hypothetical protein 3241659 4031084 Nham_2951 Nitrobacter hamburgensis X14 hypothetical protein YP_578176.1 3241141 R 323097 CDS YP_578177.1 92118448 4031085 complement(3241666..3242022) 1 NC_007964.1 ModE family transcriptional regulator 3242022 4031085 Nham_2952 Nitrobacter hamburgensis X14 ModE family transcriptional regulator YP_578177.1 3241666 R 323097 CDS YP_578178.1 92118449 4031086 complement(3242241..3243032) 1 NC_007964.1 ModE family transcriptional regulator 3243032 4031086 Nham_2953 Nitrobacter hamburgensis X14 ModE family transcriptional regulator YP_578178.1 3242241 R 323097 CDS YP_578179.1 92118450 4031087 complement(3243464..3244360) 1 NC_007964.1 aspartate/glutamate/uridylate kinase 3244360 4031087 Nham_2954 Nitrobacter hamburgensis X14 aspartate/glutamate/uridylate kinase YP_578179.1 3243464 R 323097 CDS YP_578180.1 92118451 4031088 3244536..3245771 1 NC_007964.1 transposase IS116/IS110/IS902 3245771 4031088 Nham_2955 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_578180.1 3244536 D 323097 CDS YP_578181.1 92118452 4031089 complement(3245906..3246718) 1 NC_007964.1 aspartate/glutamate/uridylate kinase 3246718 4031089 Nham_2956 Nitrobacter hamburgensis X14 aspartate/glutamate/uridylate kinase YP_578181.1 3245906 R 323097 CDS YP_578182.1 92118453 4033108 3248019..3249512 1 NC_007964.1 porin 3249512 4033108 Nham_2957 Nitrobacter hamburgensis X14 porin YP_578182.1 3248019 D 323097 CDS YP_578183.1 92118454 4033109 complement(3249704..3251221) 1 NC_007964.1 hypothetical protein 3251221 4033109 Nham_2958 Nitrobacter hamburgensis X14 hypothetical protein YP_578183.1 3249704 R 323097 CDS YP_578184.1 92118455 4033110 complement(3251335..3251745) 1 NC_007964.1 hypothetical protein 3251745 4033110 Nham_2959 Nitrobacter hamburgensis X14 hypothetical protein YP_578184.1 3251335 R 323097 CDS YP_578185.1 92118456 4033111 3252187..3252834 1 NC_007964.1 ThiJ/PfpI 3252834 4033111 Nham_2960 Nitrobacter hamburgensis X14 ThiJ/PfpI YP_578185.1 3252187 D 323097 CDS YP_578186.1 92118457 4033112 3254010..3257699 1 NC_007964.1 nitrate reductase subunit alpha 3257699 4033112 Nham_2961 Nitrobacter hamburgensis X14 nitrate reductase subunit alpha YP_578186.1 3254010 D 323097 CDS YP_578187.1 92118458 4033114 complement(3258336..3259145) 1 NC_007964.1 uroporphyrinogen III synthase HEM4 3259145 4033114 Nham_2963 Nitrobacter hamburgensis X14 uroporphyrinogen III synthase HEM4 YP_578187.1 3258336 R 323097 CDS YP_578188.1 92118459 4033115 complement(3259146..3259484) 1 NC_007964.1 nitrite reductase (NAD(P)H) large subunit, NirD 3259484 4033115 Nham_2964 Nitrobacter hamburgensis X14 nitrite reductase (NAD(P)H) large subunit, NirD YP_578188.1 3259146 R 323097 CDS YP_578189.1 92118460 4033116 complement(3259484..3261937) 1 NC_007964.1 nitrite reductase (NAD(P)H) large subunit, NirB 3261937 4033116 Nham_2965 Nitrobacter hamburgensis X14 nitrite reductase (NAD(P)H) large subunit, NirB YP_578189.1 3259484 R 323097 CDS YP_578190.1 92118461 4033118 3262560..3262775 1 NC_007964.1 hypothetical protein 3262775 4033118 Nham_2967 Nitrobacter hamburgensis X14 hypothetical protein YP_578190.1 3262560 D 323097 CDS YP_578191.1 92118462 4033119 complement(3262791..3263246) 1 NC_007964.1 ferric uptake regulator family protein 3263246 4033119 Nham_2968 Nitrobacter hamburgensis X14 ferric uptake regulator family protein YP_578191.1 3262791 R 323097 CDS YP_578192.1 92118463 4033120 3263449..3264891 1 NC_007964.1 carbohydrate-selective porin OprB 3264891 4033120 Nham_2969 Nitrobacter hamburgensis X14 carbohydrate-selective porin OprB YP_578192.1 3263449 D 323097 CDS YP_578193.1 92118464 4033121 complement(3265332..3266954) 1 NC_007964.1 ABC transporter 3266954 4033121 Nham_2970 Nitrobacter hamburgensis X14 ABC transporter YP_578193.1 3265332 R 323097 CDS YP_578194.1 92118465 4033124 3271717..3274161 1 NC_007964.1 Outer membrane autotransporter barrel 3274161 4033124 Nham_2974 Nitrobacter hamburgensis X14 Outer membrane autotransporter barrel YP_578194.1 3271717 D 323097 CDS YP_578195.1 92118466 4033125 complement(3274485..3275480) 1 NC_007964.1 hypothetical protein 3275480 4033125 Nham_2975 Nitrobacter hamburgensis X14 hypothetical protein YP_578195.1 3274485 R 323097 CDS YP_578196.1 92118467 4033126 complement(3275510..3277000) 1 NC_007964.1 sulfatase 3277000 4033126 Nham_2976 Nitrobacter hamburgensis X14 sulfatase YP_578196.1 3275510 R 323097 CDS YP_578197.1 92118468 4033127 complement(3277009..3277950) 1 NC_007964.1 secretion protein HlyD 3277950 4033127 Nham_2977 Nitrobacter hamburgensis X14 secretion protein HlyD YP_578197.1 3277009 R 323097 CDS YP_578198.1 92118469 4033243 complement(3277947..3278192) 1 NC_007964.1 hypothetical protein 3278192 4033243 Nham_2978 Nitrobacter hamburgensis X14 hypothetical protein YP_578198.1 3277947 R 323097 CDS YP_578199.1 92118470 4033244 complement(3278212..3279600) 1 NC_007964.1 hypothetical protein 3279600 4033244 Nham_2979 Nitrobacter hamburgensis X14 hypothetical protein YP_578199.1 3278212 R 323097 CDS YP_578200.1 92118471 4033245 complement(3279769..3281169) 1 NC_007964.1 hypothetical protein 3281169 4033245 Nham_2980 Nitrobacter hamburgensis X14 hypothetical protein YP_578200.1 3279769 R 323097 CDS YP_578201.1 92118472 4033246 complement(3281181..3282203) 1 NC_007964.1 NapD-like protein 3282203 4033246 Nham_2981 Nitrobacter hamburgensis X14 NapD-like protein YP_578201.1 3281181 R 323097 CDS YP_578202.1 92118473 4033248 3283907..3286513 1 NC_007964.1 hypothetical protein 3286513 4033248 Nham_2983 Nitrobacter hamburgensis X14 hypothetical protein YP_578202.1 3283907 D 323097 CDS YP_578203.1 92118474 4033250 complement(3288048..3289073) 1 NC_007964.1 hypothetical protein 3289073 4033250 Nham_2985 Nitrobacter hamburgensis X14 hypothetical protein YP_578203.1 3288048 R 323097 CDS YP_578204.1 92118475 4033251 complement(3289103..3289627) 1 NC_007964.1 hypothetical protein 3289627 4033251 Nham_2986 Nitrobacter hamburgensis X14 hypothetical protein YP_578204.1 3289103 R 323097 CDS YP_578205.1 92118476 4033252 3290046..3291149 1 NC_007964.1 AraC family transcriptional regulator 3291149 4033252 Nham_2987 Nitrobacter hamburgensis X14 AraC family transcriptional regulator YP_578205.1 3290046 D 323097 CDS YP_578206.1 92118477 4033254 3292321..3292917 1 NC_007964.1 plasmid pRiA4b ORF-3-like 3292917 4033254 Nham_2989 Nitrobacter hamburgensis X14 plasmid pRiA4b ORF-3-like YP_578206.1 3292321 D 323097 CDS YP_578207.1 92118478 4033255 complement(3293056..3293748) 1 NC_007964.1 two component transcriptional regulator 3293748 4033255 Nham_2990 Nitrobacter hamburgensis X14 two component transcriptional regulator YP_578207.1 3293056 R 323097 CDS YP_578208.1 92118479 4033256 complement(3293745..3296429) 1 NC_007964.1 osmosensitive K+ channel signal transduction histidine kinase 3296429 4033256 Nham_2991 Nitrobacter hamburgensis X14 osmosensitive K+ channel signal transduction histidine kinase YP_578208.1 3293745 R 323097 CDS YP_578209.1 92118480 4033257 complement(3296439..3297056) 1 NC_007964.1 one of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; the C subunit may be involved in assembly of the KDP complex; potassium-transporting ATPase subunit C 3297056 4033257 Nham_2992 Nitrobacter hamburgensis X14 potassium-transporting ATPase subunit C YP_578209.1 3296439 R 323097 CDS YP_578210.1 92118481 4033258 complement(3297066..3299135) 1 NC_007964.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 3299135 4033258 Nham_2993 Nitrobacter hamburgensis X14 potassium-transporting ATPase subunit B YP_578210.1 3297066 R 323097 CDS YP_578211.1 92118482 4033259 complement(3299154..3300857) 1 NC_007964.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 3300857 4033259 Nham_2994 Nitrobacter hamburgensis X14 potassium-transporting ATPase subunit A YP_578211.1 3299154 R 323097 CDS YP_578212.1 92118483 4033261 complement(3302776..3303123) 1 NC_007964.1 IS66 Orf2 like 3303123 4033261 Nham_2996 Nitrobacter hamburgensis X14 IS66 Orf2 like YP_578212.1 3302776 R 323097 CDS YP_578213.1 92118484 4032570 complement(3303120..3303527) 1 NC_007964.1 transposase IS3/IS911 3303527 4032570 Nham_2997 Nitrobacter hamburgensis X14 transposase IS3/IS911 YP_578213.1 3303120 R 323097 CDS YP_578214.1 92118485 4032571 complement(3303496..3304293) 1 NC_007964.1 transposase, IS4 3304293 4032571 Nham_2998 Nitrobacter hamburgensis X14 transposase, IS4 YP_578214.1 3303496 R 323097 CDS YP_578215.1 92118486 4032573 3305134..3305925 1 NC_007964.1 two component LuxR family transcriptional regulator 3305925 4032573 Nham_3000 Nitrobacter hamburgensis X14 two component LuxR family transcriptional regulator YP_578215.1 3305134 D 323097 CDS YP_578216.1 92118487 4032576 3308072..3308347 1 NC_007964.1 hypothetical protein 3308347 4032576 Nham_3003 Nitrobacter hamburgensis X14 hypothetical protein YP_578216.1 3308072 D 323097 CDS YP_578217.1 92118488 4032577 3309069..3309539 1 NC_007964.1 hypothetical protein 3309539 4032577 Nham_3004 Nitrobacter hamburgensis X14 hypothetical protein YP_578217.1 3309069 D 323097 CDS YP_578218.1 92118489 4032578 complement(3309764..3310126) 1 NC_007964.1 hypothetical protein 3310126 4032578 Nham_3005 Nitrobacter hamburgensis X14 hypothetical protein YP_578218.1 3309764 R 323097 CDS YP_578219.1 92118490 4032580 3310987..3312018 1 NC_007964.1 transposase IS116/IS110/IS902 3312018 4032580 Nham_3007 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_578219.1 3310987 D 323097 CDS YP_578220.1 92118491 4032581 3312453..3312917 1 NC_007964.1 transposase IS3/IS911 3312917 4032581 Nham_3008 Nitrobacter hamburgensis X14 transposase IS3/IS911 YP_578220.1 3312453 D 323097 CDS YP_578221.1 92118492 4032584 complement(3314254..3315327) 1 NC_007964.1 hypothetical protein 3315327 4032584 Nham_3011 Nitrobacter hamburgensis X14 hypothetical protein YP_578221.1 3314254 R 323097 CDS YP_578222.1 92118493 4032585 complement(3315324..3316520) 1 NC_007964.1 HPr kinase 3316520 4032585 Nham_3012 Nitrobacter hamburgensis X14 HPr kinase YP_578222.1 3315324 R 323097 CDS YP_578223.1 92118494 4032586 3316669..3316917 1 NC_007964.1 hypothetical protein 3316917 4032586 Nham_3013 Nitrobacter hamburgensis X14 hypothetical protein YP_578223.1 3316669 D 323097 CDS YP_578224.1 92118495 4032587 complement(3317056..3317991) 1 NC_007964.1 hypothetical protein 3317991 4032587 Nham_3014 Nitrobacter hamburgensis X14 hypothetical protein YP_578224.1 3317056 R 323097 CDS YP_578225.1 92118496 4032588 complement(3318270..3319493) 1 NC_007964.1 transposase, mutator type 3319493 4032588 Nham_3015 Nitrobacter hamburgensis X14 transposase, mutator type YP_578225.1 3318270 R 323097 CDS YP_578226.1 92118497 4032589 3319643..3319978 1 NC_007964.1 hypothetical protein 3319978 4032589 Nham_3016 Nitrobacter hamburgensis X14 hypothetical protein YP_578226.1 3319643 D 323097 CDS YP_578227.1 92118498 4032150 complement(3324813..3325187) 1 NC_007964.1 hypothetical protein 3325187 4032150 Nham_3021 Nitrobacter hamburgensis X14 hypothetical protein YP_578227.1 3324813 R 323097 CDS YP_578228.1 92118499 4032151 complement(3325345..3326394) 1 NC_007964.1 UDP-glucose 4-epimerase 3326394 4032151 Nham_3022 Nitrobacter hamburgensis X14 UDP-glucose 4-epimerase YP_578228.1 3325345 R 323097 CDS YP_578229.1 92118500 4032152 complement(3326623..3326955) 1 NC_007964.1 hypothetical protein 3326955 4032152 Nham_3023 Nitrobacter hamburgensis X14 hypothetical protein YP_578229.1 3326623 R 323097 CDS YP_578230.1 92118501 4032153 3327166..3328236 1 NC_007964.1 metallophosphoesterase 3328236 4032153 Nham_3024 Nitrobacter hamburgensis X14 metallophosphoesterase YP_578230.1 3327166 D 323097 CDS YP_578231.1 92118502 4032154 complement(3328309..3329622) 1 NC_007964.1 Type I secretion membrane fusion protein, HlyD 3329622 4032154 Nham_3025 Nitrobacter hamburgensis X14 Type I secretion membrane fusion protein, HlyD YP_578231.1 3328309 R 323097 CDS YP_578232.1 92118503 4032155 complement(3329622..3331625) 1 NC_007964.1 Type I secretion system ATPase, PrtD 3331625 4032155 Nham_3026 Nitrobacter hamburgensis X14 Type I secretion system ATPase, PrtD YP_578232.1 3329622 R 323097 CDS YP_578233.1 92118504 4032156 complement(3331734..3335570) 1 NC_007964.1 hypothetical protein 3335570 4032156 Nham_3027 Nitrobacter hamburgensis X14 hypothetical protein YP_578233.1 3331734 R 323097 CDS YP_578234.1 92118505 4032157 3336011..3336793 1 NC_007964.1 methyltransferase FkbM 3336793 4032157 Nham_3028 Nitrobacter hamburgensis X14 methyltransferase FkbM YP_578234.1 3336011 D 323097 CDS YP_578235.1 92118506 4032158 complement(3336831..3337637) 1 NC_007964.1 hypothetical protein 3337637 4032158 Nham_3029 Nitrobacter hamburgensis X14 hypothetical protein YP_578235.1 3336831 R 323097 CDS YP_578236.1 92118507 4032159 complement(3337678..3338982) 1 NC_007964.1 hypothetical protein 3338982 4032159 Nham_3030 Nitrobacter hamburgensis X14 hypothetical protein YP_578236.1 3337678 R 323097 CDS YP_578237.1 92118508 4032160 complement(3339002..3340249) 1 NC_007964.1 hypothetical protein 3340249 4032160 Nham_3031 Nitrobacter hamburgensis X14 hypothetical protein YP_578237.1 3339002 R 323097 CDS YP_578238.1 92118509 4032161 complement(3340236..3342380) 1 NC_007964.1 glycosyl transferase family protein 3342380 4032161 Nham_3032 Nitrobacter hamburgensis X14 glycosyl transferase family protein YP_578238.1 3340236 R 323097 CDS YP_578239.1 92118510 4032162 complement(3342491..3344005) 1 NC_007964.1 methyltransferase type 11 3344005 4032162 Nham_3033 Nitrobacter hamburgensis X14 methyltransferase type 11 YP_578239.1 3342491 R 323097 CDS YP_578240.1 92118511 4032163 3344264..3345586 1 NC_007964.1 group 1 glycosyl transferase 3345586 4032163 Nham_3034 Nitrobacter hamburgensis X14 group 1 glycosyl transferase YP_578240.1 3344264 D 323097 CDS YP_578241.1 92118512 4032164 complement(3345650..3346789) 1 NC_007964.1 DegT/DnrJ/EryC1/StrS aminotransferase 3346789 4032164 Nham_3035 Nitrobacter hamburgensis X14 DegT/DnrJ/EryC1/StrS aminotransferase YP_578241.1 3345650 R 323097 CDS YP_578242.1 92118513 4032048 complement(3346786..3347790) 1 NC_007964.1 NAD-dependent epimerase/dehydratase 3347790 4032048 Nham_3036 Nitrobacter hamburgensis X14 NAD-dependent epimerase/dehydratase YP_578242.1 3346786 R 323097 CDS YP_578243.1 92118514 4032049 complement(3347855..3348958) 1 NC_007964.1 DegT/DnrJ/EryC1/StrS aminotransferase 3348958 4032049 Nham_3037 Nitrobacter hamburgensis X14 DegT/DnrJ/EryC1/StrS aminotransferase YP_578243.1 3347855 R 323097 CDS YP_578244.1 92118515 4032050 complement(3349144..3349653) 1 NC_007964.1 hexapaptide repeat-containing transferase 3349653 4032050 Nham_3038 Nitrobacter hamburgensis X14 hexapaptide repeat-containing transferase YP_578244.1 3349144 R 323097 CDS YP_578245.1 92118516 4032051 complement(3349712..3351160) 1 NC_007964.1 polysaccharide biosynthesis protein 3351160 4032051 Nham_3039 Nitrobacter hamburgensis X14 polysaccharide biosynthesis protein YP_578245.1 3349712 R 323097 CDS YP_578246.1 92118517 4032052 complement(3351268..3352035) 1 NC_007964.1 acetyltransferase 3352035 4032052 Nham_3040 Nitrobacter hamburgensis X14 acetyltransferase YP_578246.1 3351268 R 323097 CDS YP_578247.1 92118518 4032053 complement(3352032..3353084) 1 NC_007964.1 oxidoreductase-like 3353084 4032053 Nham_3041 Nitrobacter hamburgensis X14 oxidoreductase-like YP_578247.1 3352032 R 323097 CDS YP_578248.1 92118519 4032054 complement(3353138..3354397) 1 NC_007964.1 UDP-glucose/GDP-mannose dehydrogenase 3354397 4032054 Nham_3042 Nitrobacter hamburgensis X14 UDP-glucose/GDP-mannose dehydrogenase YP_578248.1 3353138 R 323097 CDS YP_578249.1 92118520 4032055 complement(3354390..3355508) 1 NC_007964.1 UDP-N-acetylglucosamine 2-epimerase 3355508 4032055 Nham_3043 Nitrobacter hamburgensis X14 UDP-N-acetylglucosamine 2-epimerase YP_578249.1 3354390 R 323097 CDS YP_578250.1 92118521 4032056 complement(3355510..3356358) 1 NC_007964.1 WecB/TagA/CpsF family glycosyl transferase 3356358 4032056 Nham_3044 Nitrobacter hamburgensis X14 WecB/TagA/CpsF family glycosyl transferase YP_578250.1 3355510 R 323097 CDS YP_578251.1 92118522 4032057 3356517..3357434 1 NC_007964.1 glycosyl transferase family protein 3357434 4032057 Nham_3045 Nitrobacter hamburgensis X14 glycosyl transferase family protein YP_578251.1 3356517 D 323097 CDS YP_578252.1 92118523 4032058 complement(3357468..3358667) 1 NC_007964.1 hypothetical protein 3358667 4032058 Nham_3046 Nitrobacter hamburgensis X14 hypothetical protein YP_578252.1 3357468 R 323097 CDS YP_578253.1 92118524 4032059 complement(3358701..3360134) 1 NC_007964.1 Type I secretion membrane fusion protein, HlyD 3360134 4032059 Nham_3047 Nitrobacter hamburgensis X14 Type I secretion membrane fusion protein, HlyD YP_578253.1 3358701 R 323097 CDS YP_578254.1 92118525 4032060 complement(3360131..3362353) 1 NC_007964.1 ABC transporter 3362353 4032060 Nham_3048 Nitrobacter hamburgensis X14 ABC transporter YP_578254.1 3360131 R 323097 CDS YP_578255.1 92118526 4032061 complement(3362331..3362669) 1 NC_007964.1 hypothetical protein 3362669 4032061 Nham_3049 Nitrobacter hamburgensis X14 hypothetical protein YP_578255.1 3362331 R 323097 CDS YP_578256.1 92118527 4032062 complement(3362719..3363510) 1 NC_007964.1 methyltransferase type 11 3363510 4032062 Nham_3050 Nitrobacter hamburgensis X14 methyltransferase type 11 YP_578256.1 3362719 R 323097 CDS YP_578257.1 92118528 4032063 complement(3363655..3368889) 1 NC_007964.1 hypothetical protein 3368889 4032063 Nham_3051 Nitrobacter hamburgensis X14 hypothetical protein YP_578257.1 3363655 R 323097 CDS YP_578258.1 92118529 4032064 complement(3369057..3369953) 1 NC_007964.1 glucose-1-phosphate thymidylyltransferase 3369953 4032064 Nham_3052 Nitrobacter hamburgensis X14 glucose-1-phosphate thymidylyltransferase YP_578258.1 3369057 R 323097 CDS YP_578259.1 92118530 4032065 complement(3369950..3370873) 1 NC_007964.1 dTDP-4-dehydrorhamnose reductase 3370873 4032065 Nham_3053 Nitrobacter hamburgensis X14 dTDP-4-dehydrorhamnose reductase YP_578259.1 3369950 R 323097 CDS YP_578260.1 92118531 4032066 complement(3370866..3371918) 1 NC_007964.1 dTDP-glucose 4,6-dehydratase 3371918 4032066 Nham_3054 Nitrobacter hamburgensis X14 dTDP-glucose 4,6-dehydratase YP_578260.1 3370866 R 323097 CDS YP_578261.1 92118532 4032067 complement(3371936..3372559) 1 NC_007964.1 dTDP-4-dehydrorhamnose 3,5-epimerase 3372559 4032067 Nham_3055 Nitrobacter hamburgensis X14 dTDP-4-dehydrorhamnose 3,5-epimerase YP_578261.1 3371936 R 323097 CDS YP_578262.1 92118533 4030957 3372897..3375215 1 NC_007964.1 protein-tyrosine kinase 3375215 4030957 Nham_3056 Nitrobacter hamburgensis X14 protein-tyrosine kinase YP_578262.1 3372897 D 323097 CDS YP_578263.1 92118534 4030958 3375341..3376663 1 NC_007964.1 polysaccharide export protein 3376663 4030958 Nham_3057 Nitrobacter hamburgensis X14 polysaccharide export protein YP_578263.1 3375341 D 323097 CDS YP_578264.1 92118535 4030959 3377413..3378624 1 NC_007964.1 transposase IS116/IS110/IS902 3378624 4030959 Nham_3058 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_578264.1 3377413 D 323097 CDS YP_578265.1 92118536 4030961 3380381..3381532 1 NC_007964.1 transposase IS116/IS110/IS902 3381532 4030961 Nham_3060 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_578265.1 3380381 D 323097 CDS YP_578266.1 92118537 4030962 complement(3381825..3382229) 1 NC_007964.1 hypothetical protein 3382229 4030962 Nham_3061 Nitrobacter hamburgensis X14 hypothetical protein YP_578266.1 3381825 R 323097 CDS YP_578267.1 92118538 4030963 complement(3382184..3382729) 1 NC_007964.1 hypothetical protein 3382729 4030963 Nham_3062 Nitrobacter hamburgensis X14 hypothetical protein YP_578267.1 3382184 R 323097 CDS YP_578268.1 92118539 4030965 3383826..3385298 1 NC_007964.1 sugar transferase 3385298 4030965 Nham_3064 Nitrobacter hamburgensis X14 sugar transferase YP_578268.1 3383826 D 323097 CDS YP_578269.1 92118540 4030966 3385602..3386000 1 NC_007964.1 hypothetical protein 3386000 4030966 Nham_3065 Nitrobacter hamburgensis X14 hypothetical protein YP_578269.1 3385602 D 323097 CDS YP_578270.1 92118541 4030969 complement(3386444..3386812) 1 NC_007964.1 histone-like nucleoid-structuring protein H-NS 3386812 4030969 Nham_3068 Nitrobacter hamburgensis X14 histone-like nucleoid-structuring protein H-NS YP_578270.1 3386444 R 323097 CDS YP_578271.1 92118542 4030970 3387740..3388132 1 NC_007964.1 histone-like nucleoid-structuring protein H-NS 3388132 4030970 Nham_3069 Nitrobacter hamburgensis X14 histone-like nucleoid-structuring protein H-NS YP_578271.1 3387740 D 323097 CDS YP_578272.1 92118543 4030973 3390042..3390476 1 NC_007964.1 hypothetical protein 3390476 4030973 Nham_3072 Nitrobacter hamburgensis X14 hypothetical protein YP_578272.1 3390042 D 323097 CDS YP_578273.1 92118544 4030974 3390473..3390850 1 NC_007964.1 hypothetical protein 3390850 4030974 Nham_3073 Nitrobacter hamburgensis X14 hypothetical protein YP_578273.1 3390473 D 323097 CDS YP_578274.1 92118545 4030975 complement(3391328..3391861) 1 NC_007964.1 hypothetical protein 3391861 4030975 Nham_3074 Nitrobacter hamburgensis X14 hypothetical protein YP_578274.1 3391328 R 323097 CDS YP_578275.1 92118546 4030399 3392026..3392838 1 NC_007964.1 transposase, IS4 3392838 4030399 Nham_3075 Nitrobacter hamburgensis X14 transposase, IS4 YP_578275.1 3392026 D 323097 CDS YP_578276.1 92118547 4030400 complement(3392861..3394297) 1 NC_007964.1 transposase 3394297 4030400 Nham_3076 Nitrobacter hamburgensis X14 transposase YP_578276.1 3392861 R 323097 CDS YP_578277.1 92118548 4030401 3394775..3395596 1 NC_007964.1 hypothetical protein 3395596 4030401 Nham_3077 Nitrobacter hamburgensis X14 hypothetical protein YP_578277.1 3394775 D 323097 CDS YP_578278.1 92118549 4030402 complement(3395763..3396113) 1 NC_007964.1 hypothetical protein 3396113 4030402 Nham_3078 Nitrobacter hamburgensis X14 hypothetical protein YP_578278.1 3395763 R 323097 CDS YP_578279.1 92118550 4030403 complement(3396110..3397123) 1 NC_007964.1 transposase IS116/IS110/IS902 3397123 4030403 Nham_3079 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_578279.1 3396110 R 323097 CDS YP_578280.1 92118551 4030405 3398531..3398731 1 NC_007964.1 transposase IS3/IS911 3398731 4030405 Nham_3081 Nitrobacter hamburgensis X14 transposase IS3/IS911 YP_578280.1 3398531 D 323097 CDS YP_578281.1 92118552 4030406 3398796..3399176 1 NC_007964.1 hypothetical protein 3399176 4030406 Nham_3082 Nitrobacter hamburgensis X14 hypothetical protein YP_578281.1 3398796 D 323097 CDS YP_578282.1 92118553 4030407 complement(3399537..3400568) 1 NC_007964.1 transposase IS116/IS110/IS902 3400568 4030407 Nham_3083 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_578282.1 3399537 R 323097 CDS YP_578283.1 92118554 4030409 3401936..3402949 1 NC_007964.1 transposase IS116/IS110/IS902 3402949 4030409 Nham_3085 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_578283.1 3401936 D 323097 CDS YP_578284.1 92118555 4030411 complement(3404778..3412001) 1 NC_007964.1 Outer membrane autotransporter barrel 3412001 4030411 Nham_3087 Nitrobacter hamburgensis X14 Outer membrane autotransporter barrel YP_578284.1 3404778 R 323097 CDS YP_578285.1 92118556 4030412 3412454..3414178 1 NC_007964.1 transcriptional regulator CadC 3414178 4030412 Nham_3088 Nitrobacter hamburgensis X14 transcriptional regulator CadC YP_578285.1 3412454 D 323097 CDS YP_578286.1 92118557 4030413 3414233..3414478 1 NC_007964.1 hypothetical protein 3414478 4030413 Nham_3089 Nitrobacter hamburgensis X14 hypothetical protein YP_578286.1 3414233 D 323097 CDS YP_578287.1 92118558 4030414 3414697..3415302 1 NC_007964.1 nuclease (SNase-like) 3415302 4030414 Nham_3090 Nitrobacter hamburgensis X14 nuclease (SNase-like) YP_578287.1 3414697 D 323097 CDS YP_578288.1 92118559 4030415 complement(3415619..3416572) 1 NC_007964.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 3416572 4030415 Nham_3091 Nitrobacter hamburgensis X14 ribose-phosphate pyrophosphokinase YP_578288.1 3415619 R 323097 CDS YP_578289.1 92118560 4030416 complement(3416738..3417337) 1 NC_007964.1 hypothetical protein 3417337 4030416 Nham_3092 Nitrobacter hamburgensis X14 hypothetical protein YP_578289.1 3416738 R 323097 CDS YP_578290.1 92118561 4030417 complement(3417469..3418239) 1 NC_007964.1 hypothetical protein 3418239 4030417 Nham_3093 Nitrobacter hamburgensis X14 hypothetical protein YP_578290.1 3417469 R 323097 CDS YP_578291.1 92118562 4030418 complement(3418236..3419363) 1 NC_007964.1 hypothetical protein 3419363 4030418 Nham_3094 Nitrobacter hamburgensis X14 hypothetical protein YP_578291.1 3418236 R 323097 CDS YP_578292.1 92118563 4029884 complement(3419356..3420231) 1 NC_007964.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 3420231 4029884 Nham_3095 Nitrobacter hamburgensis X14 prolipoprotein diacylglyceryl transferase YP_578292.1 3419356 R 323097 CDS YP_578293.1 92118564 4029885 3420442..3420699 1 NC_007964.1 hypothetical protein 3420699 4029885 Nham_3096 Nitrobacter hamburgensis X14 hypothetical protein YP_578293.1 3420442 D 323097 CDS YP_578294.1 92118565 4029886 complement(3420723..3420881) 1 NC_007964.1 hypothetical protein 3420881 4029886 Nham_3097 Nitrobacter hamburgensis X14 hypothetical protein YP_578294.1 3420723 R 323097 CDS YP_578295.1 92118566 4029887 complement(3421125..3421607) 1 NC_007964.1 MaoC-like dehydratase 3421607 4029887 Nham_3098 Nitrobacter hamburgensis X14 MaoC-like dehydratase YP_578295.1 3421125 R 323097 CDS YP_578296.1 92118567 4029888 complement(3421611..3422072) 1 NC_007964.1 MaoC-like dehydratase 3422072 4029888 Nham_3099 Nitrobacter hamburgensis X14 MaoC-like dehydratase YP_578296.1 3421611 R 323097 CDS YP_578297.1 92118568 4029889 3422231..3422524 1 NC_007964.1 hypothetical protein 3422524 4029889 Nham_3100 Nitrobacter hamburgensis X14 hypothetical protein YP_578297.1 3422231 D 323097 CDS YP_578298.1 92118569 4029890 complement(3422811..3423908) 1 NC_007964.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 3423908 4029890 Nham_3101 Nitrobacter hamburgensis X14 GTP-dependent nucleic acid-binding protein EngD YP_578298.1 3422811 R 323097 CDS YP_578299.1 92118570 4029891 complement(3424061..3424675) 1 NC_007964.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 3424675 4029891 Nham_3102 Nitrobacter hamburgensis X14 peptidyl-tRNA hydrolase YP_578299.1 3424061 R 323097 CDS YP_578300.1 92118571 4029892 complement(3424691..3425392) 1 NC_007964.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 3425392 4029892 Nham_3103 Nitrobacter hamburgensis X14 50S ribosomal protein L25/general stress protein Ctc YP_578300.1 3424691 R 323097 CDS YP_578301.1 92118572 4029893 3425631..3425978 1 NC_007964.1 hypothetical protein 3425978 4029893 Nham_3104 Nitrobacter hamburgensis X14 hypothetical protein YP_578301.1 3425631 D 323097 CDS YP_578302.1 92118573 4029894 3426076..3426615 1 NC_007964.1 hypothetical protein 3426615 4029894 Nham_3105 Nitrobacter hamburgensis X14 hypothetical protein YP_578302.1 3426076 D 323097 CDS YP_578303.1 92118574 4029895 3426893..3427729 1 NC_007964.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 3427729 4029895 Nham_3106 Nitrobacter hamburgensis X14 pyrroline-5-carboxylate reductase YP_578303.1 3426893 D 323097 CDS YP_578304.1 92118575 4029896 complement(3427833..3428933) 1 NC_007964.1 branched-chain alpha-keto acid dehydrogenase subunit E2 3428933 4029896 Nham_3107 Nitrobacter hamburgensis X14 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_578304.1 3427833 R 323097 CDS YP_578305.1 92118576 4029897 complement(3428954..3429934) 1 NC_007964.1 transketolase, central region 3429934 4029897 Nham_3108 Nitrobacter hamburgensis X14 transketolase, central region YP_578305.1 3428954 R 323097 CDS YP_578306.1 92118577 4029898 complement(3429934..3431025) 1 NC_007964.1 pyruvate dehydrogenase (lipoamide) 3431025 4029898 Nham_3109 Nitrobacter hamburgensis X14 pyruvate dehydrogenase (lipoamide) YP_578306.1 3429934 R 323097 CDS YP_578307.1 92118578 4029899 3431235..3432746 1 NC_007964.1 aldehyde dehydrogenase 3432746 4029899 Nham_3110 Nitrobacter hamburgensis X14 aldehyde dehydrogenase YP_578307.1 3431235 D 323097 CDS YP_578308.1 92118579 4029900 complement(3432767..3433984) 1 NC_007964.1 ornithine aminotransferase 3433984 4029900 Nham_3111 Nitrobacter hamburgensis X14 ornithine aminotransferase YP_578308.1 3432767 R 323097 CDS YP_578309.1 92118580 4029901 3434268..3434738 1 NC_007964.1 YbaK/prolyl-tRNA synthetase associated domain-containing protein 3434738 4029901 Nham_3112 Nitrobacter hamburgensis X14 YbaK/prolyl-tRNA synthetase associated domain-containing protein YP_578309.1 3434268 D 323097 CDS YP_578310.1 92118581 4029902 3435214..3436323 1 NC_007964.1 transposase, IS4 3436323 4029902 Nham_3113 Nitrobacter hamburgensis X14 transposase, IS4 YP_578310.1 3435214 D 323097 CDS YP_578311.1 92118582 4032300 complement(3436440..3437237) 1 NC_007964.1 hypothetical protein 3437237 4032300 Nham_3114 Nitrobacter hamburgensis X14 hypothetical protein YP_578311.1 3436440 R 323097 CDS YP_578312.1 92118583 4032301 3437578..3437826 1 NC_007964.1 hypothetical protein 3437826 4032301 Nham_3115 Nitrobacter hamburgensis X14 hypothetical protein YP_578312.1 3437578 D 323097 CDS YP_578313.1 92118584 4032302 complement(3437907..3439052) 1 NC_007964.1 hypothetical protein 3439052 4032302 Nham_3116 Nitrobacter hamburgensis X14 hypothetical protein YP_578313.1 3437907 R 323097 CDS YP_578314.1 92118585 4032304 complement(3439362..3441386) 1 NC_007964.1 4Fe-4S ferredoxin 3441386 4032304 Nham_3118 Nitrobacter hamburgensis X14 4Fe-4S ferredoxin YP_578314.1 3439362 R 323097 CDS YP_578315.1 92118586 4032305 3441485..3442240 1 NC_007964.1 hypothetical protein 3442240 4032305 Nham_3119 Nitrobacter hamburgensis X14 hypothetical protein YP_578315.1 3441485 D 323097 CDS YP_578316.1 92118587 4032306 3442237..3442776 1 NC_007964.1 hypothetical protein 3442776 4032306 Nham_3120 Nitrobacter hamburgensis X14 hypothetical protein YP_578316.1 3442237 D 323097 CDS YP_578317.1 92118588 4032307 3442773..3443780 1 NC_007964.1 hypothetical protein 3443780 4032307 Nham_3121 Nitrobacter hamburgensis X14 hypothetical protein YP_578317.1 3442773 D 323097 CDS YP_578318.1 92118589 4032308 3443777..3444295 1 NC_007964.1 molybdopterin-guanine dinucleotide biosynthesis protein A 3444295 4032308 Nham_3122 Nitrobacter hamburgensis X14 molybdopterin-guanine dinucleotide biosynthesis protein A YP_578318.1 3443777 D 323097 CDS YP_578319.1 92118590 4032309 3444292..3444990 1 NC_007964.1 hypothetical protein 3444990 4032309 Nham_3123 Nitrobacter hamburgensis X14 hypothetical protein YP_578319.1 3444292 D 323097 CDS YP_578320.1 92118591 4032310 3445112..3445894 1 NC_007964.1 cytoplasmic chaperone TorD 3445894 4032310 Nham_3124 Nitrobacter hamburgensis X14 cytoplasmic chaperone TorD YP_578320.1 3445112 D 323097 CDS YP_578321.1 92118592 4032311 3445929..3446147 1 NC_007964.1 twin-arginine translocation pathway signal 3446147 4032311 Nham_3125 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_578321.1 3445929 D 323097 CDS YP_578322.1 92118593 4032312 3446159..3449110 1 NC_007964.1 twin-arginine translocation pathway signal 3449110 4032312 Nham_3126 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_578322.1 3446159 D 323097 CDS YP_578323.1 92118594 4032313 3449123..3449719 1 NC_007964.1 4Fe-4S ferredoxin 3449719 4032313 Nham_3127 Nitrobacter hamburgensis X14 4Fe-4S ferredoxin YP_578323.1 3449123 D 323097 CDS YP_578324.1 92118595 4032314 3449777..3450787 1 NC_007964.1 formate dehydrogenase, gamma subunit 3450787 4032314 Nham_3128 Nitrobacter hamburgensis X14 formate dehydrogenase, gamma subunit YP_578324.1 3449777 D 323097 CDS YP_578325.1 92118596 4032315 complement(3450987..3451229) 1 NC_007964.1 SirA-like protein 3451229 4032315 Nham_3129 Nitrobacter hamburgensis X14 SirA-like protein YP_578325.1 3450987 R 323097 CDS YP_578326.1 92118597 4032316 complement(3451272..3452528) 1 NC_007964.1 MoeA-like domain-containing protein 3452528 4032316 Nham_3130 Nitrobacter hamburgensis X14 MoeA-like domain-containing protein YP_578326.1 3451272 R 323097 CDS YP_578327.1 92118598 4032317 complement(3452538..3453137) 1 NC_007964.1 molybdopterin-guanine dinucleotide biosynthesis protein B 3453137 4032317 Nham_3131 Nitrobacter hamburgensis X14 molybdopterin-guanine dinucleotide biosynthesis protein B YP_578327.1 3452538 R 323097 CDS YP_578328.1 92118599 4032318 3453244..3454134 1 NC_007964.1 formate dehydrogenase family accessory protein FdhD 3454134 4032318 Nham_3132 Nitrobacter hamburgensis X14 formate dehydrogenase family accessory protein FdhD YP_578328.1 3453244 D 323097 CDS YP_578329.1 92118600 4032319 3454124..3454753 1 NC_007964.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 3454753 mobA 4032319 mobA Nitrobacter hamburgensis X14 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_578329.1 3454124 D 323097 CDS YP_578330.1 92118601 4030322 complement(3454948..3456909) 1 NC_007964.1 molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein 3456909 4030322 Nham_3134 Nitrobacter hamburgensis X14 molybdopterin biosynthesis protein MoeA/LysR substrate binding-domain-containing protein YP_578330.1 3454948 R 323097 CDS YP_578331.1 92118602 4030323 complement(3456911..3458020) 1 NC_007964.1 molybdopterin binding domain-containing protein 3458020 4030323 Nham_3135 Nitrobacter hamburgensis X14 molybdopterin binding domain-containing protein YP_578331.1 3456911 R 323097 CDS YP_578332.1 92118603 4030324 complement(3458356..3459789) 1 NC_007964.1 sensor signal transduction histidine kinase 3459789 4030324 Nham_3136 Nitrobacter hamburgensis X14 sensor signal transduction histidine kinase YP_578332.1 3458356 R 323097 CDS YP_578333.1 92118604 4030325 complement(3459789..3460517) 1 NC_007964.1 two component transcriptional regulator 3460517 4030325 Nham_3137 Nitrobacter hamburgensis X14 two component transcriptional regulator YP_578333.1 3459789 R 323097 CDS YP_578334.1 92118605 4030326 complement(3460514..3461062) 1 NC_007964.1 MarR family transcriptional regulator 3461062 4030326 Nham_3138 Nitrobacter hamburgensis X14 MarR family transcriptional regulator YP_578334.1 3460514 R 323097 CDS YP_578335.1 92118606 4030327 3461610..3462722 1 NC_007964.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 3462722 4030327 Nham_3139 Nitrobacter hamburgensis X14 branched-chain amino acid aminotransferase YP_578335.1 3461610 D 323097 CDS YP_578336.1 92118607 4030328 3463078..3464187 1 NC_007964.1 transposase, IS4 3464187 4030328 Nham_3140 Nitrobacter hamburgensis X14 transposase, IS4 YP_578336.1 3463078 D 323097 CDS YP_578337.1 92118608 4030329 complement(3464304..3465722) 1 NC_007964.1 MATE efflux family protein 3465722 4030329 Nham_3141 Nitrobacter hamburgensis X14 MATE efflux family protein YP_578337.1 3464304 R 323097 CDS YP_578338.1 92118609 4030330 complement(3465834..3466865) 1 NC_007964.1 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 3466865 4030330 Nham_3142 Nitrobacter hamburgensis X14 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_578338.1 3465834 R 323097 CDS YP_578339.1 92118610 4030331 complement(3466880..3467347) 1 NC_007964.1 molybdopterin biosynthesis MoaE 3467347 4030331 Nham_3143 Nitrobacter hamburgensis X14 molybdopterin biosynthesis MoaE YP_578339.1 3466880 R 323097 CDS YP_578340.1 92118611 4030332 complement(3467370..3467621) 1 NC_007964.1 molybdopterin converting factor subunit 1 3467621 4030332 Nham_3144 Nitrobacter hamburgensis X14 molybdopterin converting factor subunit 1 YP_578340.1 3467370 R 323097 CDS YP_578341.1 92118612 4030333 complement(3467618..3468235) 1 NC_007964.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3468235 4030333 Nham_3145 Nitrobacter hamburgensis X14 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_578341.1 3467618 R 323097 CDS YP_578342.1 92118613 4030334 complement(3468379..3470451) 1 NC_007964.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 3470451 uvrC 4030334 uvrC Nitrobacter hamburgensis X14 excinuclease ABC subunit C YP_578342.1 3468379 R 323097 CDS YP_578343.1 92118614 4030335 3470743..3471363 1 NC_007964.1 outer-membrane immunogenic protein precursor 3471363 4030335 Nham_3147 Nitrobacter hamburgensis X14 outer-membrane immunogenic protein precursor YP_578343.1 3470743 D 323097 CDS YP_578344.1 92118615 4030336 complement(3471524..3471739) 1 NC_007964.1 cold-shock DNA-binding domain-containing protein 3471739 4030336 Nham_3148 Nitrobacter hamburgensis X14 cold-shock DNA-binding domain-containing protein YP_578344.1 3471524 R 323097 CDS YP_578345.1 92118616 4030337 complement(3471996..3472853) 1 NC_007964.1 hypothetical protein 3472853 4030337 Nham_3149 Nitrobacter hamburgensis X14 hypothetical protein YP_578345.1 3471996 R 323097 CDS YP_578346.1 92118617 4030338 complement(3473017..3473709) 1 NC_007964.1 ribonuclease T2 3473709 4030338 Nham_3150 Nitrobacter hamburgensis X14 ribonuclease T2 YP_578346.1 3473017 R 323097 CDS YP_578347.1 92118618 4030339 complement(3473825..3474280) 1 NC_007964.1 hypothetical protein 3474280 4030339 Nham_3151 Nitrobacter hamburgensis X14 hypothetical protein YP_578347.1 3473825 R 323097 CDS YP_578348.1 92118619 4030340 3474453..3474737 1 NC_007964.1 hypothetical protein 3474737 4030340 Nham_3152 Nitrobacter hamburgensis X14 hypothetical protein YP_578348.1 3474453 D 323097 CDS YP_578349.1 92118620 4030226 3474851..3475378 1 NC_007964.1 hypothetical protein 3475378 4030226 Nham_3153 Nitrobacter hamburgensis X14 hypothetical protein YP_578349.1 3474851 D 323097 CDS YP_578350.1 92118621 4030227 complement(3475589..3477169) 1 NC_007964.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 3477169 hisS 4030227 hisS Nitrobacter hamburgensis X14 histidyl-tRNA synthetase YP_578350.1 3475589 R 323097 CDS YP_578351.1 92118622 4030229 complement(3479057..3479500) 1 NC_007964.1 TadE-like protein 3479500 4030229 Nham_3156 Nitrobacter hamburgensis X14 TadE-like protein YP_578351.1 3479057 R 323097 CDS YP_578352.1 92118623 4030230 3479792..3481129 1 NC_007964.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 3481129 4030230 Nham_3157 Nitrobacter hamburgensis X14 beta alanine--pyruvate transaminase YP_578352.1 3479792 D 323097 CDS YP_578353.1 92118624 4030231 3481242..3482693 1 NC_007964.1 diguanylate phosphodiesterase 3482693 4030231 Nham_3158 Nitrobacter hamburgensis X14 diguanylate phosphodiesterase YP_578353.1 3481242 D 323097 CDS YP_578354.1 92118625 4030232 3482709..3483563 1 NC_007964.1 HAD family hydrolase 3483563 4030232 Nham_3159 Nitrobacter hamburgensis X14 HAD family hydrolase YP_578354.1 3482709 D 323097 CDS YP_578355.1 92118626 4030233 complement(3483621..3484016) 1 NC_007964.1 response regulator receiver domain-containing protein 3484016 4030233 Nham_3160 Nitrobacter hamburgensis X14 response regulator receiver domain-containing protein YP_578355.1 3483621 R 323097 CDS YP_578356.1 92118627 4030234 3484265..3485248 1 NC_007964.1 riboflavin biosynthesis protein RibF 3485248 4030234 Nham_3161 Nitrobacter hamburgensis X14 riboflavin biosynthesis protein RibF YP_578356.1 3484265 D 323097 CDS YP_578357.1 92118628 4030235 3485337..3488336 1 NC_007964.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 3488336 ileS 4030235 ileS Nitrobacter hamburgensis X14 isoleucyl-tRNA synthetase YP_578357.1 3485337 D 323097 CDS YP_578358.1 92118629 4030236 3488333..3488827 1 NC_007964.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 3488827 4030236 Nham_3163 Nitrobacter hamburgensis X14 lipoprotein signal peptidase YP_578358.1 3488333 D 323097 CDS YP_578359.1 92118630 4030237 3488907..3489620 1 NC_007964.1 hypothetical protein 3489620 4030237 Nham_3164 Nitrobacter hamburgensis X14 hypothetical protein YP_578359.1 3488907 D 323097 CDS YP_578360.1 92118631 4030238 3489728..3491122 1 NC_007964.1 peptidase M16-like 3491122 4030238 Nham_3165 Nitrobacter hamburgensis X14 peptidase M16-like YP_578360.1 3489728 D 323097 CDS YP_578361.1 92118632 4030239 3491119..3492516 1 NC_007964.1 peptidase M16-like 3492516 4030239 Nham_3166 Nitrobacter hamburgensis X14 peptidase M16-like YP_578361.1 3491119 D 323097 CDS YP_578362.1 92118633 4030240 3492612..3493031 1 NC_007964.1 peptidyl-tRNA hydrolase domain-containing protein 3493031 4030240 Nham_3167 Nitrobacter hamburgensis X14 peptidyl-tRNA hydrolase domain-containing protein YP_578362.1 3492612 D 323097 CDS YP_578363.1 92118634 4030241 complement(3493117..3494211) 1 NC_007964.1 tISRso5; ISRSO5-transposase protein 3494211 4030241 Nham_3168 Nitrobacter hamburgensis X14 tISRso5; ISRSO5-transposase protein YP_578363.1 3493117 R 323097 CDS YP_578364.1 92118635 4030242 3494319..3496130 1 NC_007964.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 3496130 mutL 4030242 mutL Nitrobacter hamburgensis X14 DNA mismatch repair protein YP_578364.1 3494319 D 323097 CDS YP_578365.1 92118636 4030243 complement(3496271..3496825) 1 NC_007964.1 hypothetical protein 3496825 4030243 Nham_3170 Nitrobacter hamburgensis X14 hypothetical protein YP_578365.1 3496271 R 323097 CDS YP_578366.1 92118637 4030244 complement(3496829..3498892) 1 NC_007964.1 pseudouridine synthase, Rsu 3498892 4030244 Nham_3171 Nitrobacter hamburgensis X14 pseudouridine synthase, Rsu YP_578366.1 3496829 R 323097 CDS YP_578367.1 92118638 4030245 3499149..3499595 1 NC_007964.1 zinc-binding CMP/dCMP deaminase 3499595 4030245 Nham_3172 Nitrobacter hamburgensis X14 zinc-binding CMP/dCMP deaminase YP_578367.1 3499149 D 323097 CDS YP_578368.1 92118639 4029539 complement(3499720..3501006) 1 NC_007964.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 3501006 4029539 Nham_3173 Nitrobacter hamburgensis X14 phosphoribosylamine--glycine ligase YP_578368.1 3499720 R 323097 CDS YP_578369.1 92118640 4029540 3501088..3502713 1 NC_007964.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 3502713 xseA 4029540 xseA Nitrobacter hamburgensis X14 exodeoxyribonuclease VII large subunit YP_578369.1 3501088 D 323097 CDS YP_578370.1 92118641 4029541 complement(3502710..3503528) 1 NC_007964.1 dienelactone hydrolase 3503528 4029541 Nham_3175 Nitrobacter hamburgensis X14 dienelactone hydrolase YP_578370.1 3502710 R 323097 CDS YP_578371.1 92118642 4029542 3503810..3504037 1 NC_007964.1 hypothetical protein 3504037 4029542 Nham_3176 Nitrobacter hamburgensis X14 hypothetical protein YP_578371.1 3503810 D 323097 CDS YP_578372.1 92118643 4029543 complement(3504146..3505153) 1 NC_007964.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 3505153 lpxK 4029543 lpxK Nitrobacter hamburgensis X14 tetraacyldisaccharide 4'-kinase YP_578372.1 3504146 R 323097 CDS YP_578373.1 92118644 4029544 complement(3505146..3506450) 1 NC_007964.1 three-deoxy-D-manno-octulosonic-acid transferase-like 3506450 4029544 Nham_3178 Nitrobacter hamburgensis X14 three-deoxy-D-manno-octulosonic-acid transferase-like YP_578373.1 3505146 R 323097 CDS YP_578374.1 92118645 4029545 complement(3506443..3507177) 1 NC_007964.1 hypothetical protein 3507177 4029545 Nham_3179 Nitrobacter hamburgensis X14 hypothetical protein YP_578374.1 3506443 R 323097 CDS YP_578375.1 92118646 4029546 complement(3507174..3507425) 1 NC_007964.1 hypothetical protein 3507425 4029546 Nham_3180 Nitrobacter hamburgensis X14 hypothetical protein YP_578375.1 3507174 R 323097 CDS YP_578376.1 92118647 4029547 complement(3507491..3508306) 1 NC_007964.1 inositol monophosphatase 3508306 4029547 Nham_3181 Nitrobacter hamburgensis X14 inositol monophosphatase YP_578376.1 3507491 R 323097 CDS YP_578377.1 92118648 4029548 complement(3508293..3509684) 1 NC_007964.1 C69 family peptidase 3509684 4029548 Nham_3182 Nitrobacter hamburgensis X14 C69 family peptidase YP_578377.1 3508293 R 323097 CDS YP_578378.1 92118649 4029549 3509969..3510490 1 NC_007964.1 hypothetical protein 3510490 4029549 Nham_3183 Nitrobacter hamburgensis X14 hypothetical protein YP_578378.1 3509969 D 323097 CDS YP_578379.1 92118650 4029550 complement(3510487..3511428) 1 NC_007964.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; 4-hydroxybenzoate polyprenyltransferase 3511428 ubiA 4029550 ubiA Nitrobacter hamburgensis X14 4-hydroxybenzoate polyprenyltransferase YP_578379.1 3510487 R 323097 CDS YP_578380.1 92118651 4029551 complement(3511439..3512206) 1 NC_007964.1 hypothetical protein 3512206 4029551 Nham_3185 Nitrobacter hamburgensis X14 hypothetical protein YP_578380.1 3511439 R 323097 CDS YP_578381.1 92118652 4029552 3512479..3513264 1 NC_007964.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 3513264 4029552 Nham_3186 Nitrobacter hamburgensis X14 16S ribosomal RNA methyltransferase RsmE YP_578381.1 3512479 D 323097 CDS YP_578382.1 92118653 4029553 3513349..3514536 1 NC_007964.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase regulatory subunit 3514536 hisZ 4029553 hisZ Nitrobacter hamburgensis X14 ATP phosphoribosyltransferase regulatory subunit YP_578382.1 3513349 D 323097 CDS YP_578383.1 92118654 4029554 3514533..3515510 1 NC_007964.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 3515510 hisG 4029554 hisG Nitrobacter hamburgensis X14 ATP phosphoribosyltransferase YP_578383.1 3514533 D 323097 CDS YP_578384.1 92118655 4029555 3515584..3516630 1 NC_007964.1 glycosyl transferase family protein 3516630 4029555 Nham_3189 Nitrobacter hamburgensis X14 glycosyl transferase family protein YP_578384.1 3515584 D 323097 CDS YP_578385.1 92118656 4029556 3516627..3517469 1 NC_007964.1 YdjC-like protein 3517469 4029556 Nham_3190 Nitrobacter hamburgensis X14 YdjC-like protein YP_578385.1 3516627 D 323097 CDS YP_578386.1 92118657 4029557 3517586..3518416 1 NC_007964.1 periplasmic ligand-binding sensor protein 3518416 4029557 Nham_3191 Nitrobacter hamburgensis X14 periplasmic ligand-binding sensor protein YP_578386.1 3517586 D 323097 CDS YP_578387.1 92118658 4033358 complement(3518508..3519287) 1 NC_007964.1 ErfK/YbiS/YcfS/YnhG 3519287 4033358 Nham_3192 Nitrobacter hamburgensis X14 ErfK/YbiS/YcfS/YnhG YP_578387.1 3518508 R 323097 CDS YP_578388.1 92118659 4033359 3519605..3520387 1 NC_007964.1 hypothetical protein 3520387 4033359 Nham_3193 Nitrobacter hamburgensis X14 hypothetical protein YP_578388.1 3519605 D 323097 CDS YP_578389.1 92118660 4033360 complement(3520607..3521164) 1 NC_007964.1 hypothetical protein 3521164 4033360 Nham_3194 Nitrobacter hamburgensis X14 hypothetical protein YP_578389.1 3520607 R 323097 CDS YP_578390.1 92118661 4033361 3521497..3521793 1 NC_007964.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 3521793 groES 4033361 groES Nitrobacter hamburgensis X14 co-chaperonin GroES YP_578390.1 3521497 D 323097 CDS YP_578391.1 92118662 4033362 3521996..3523633 1 NC_007964.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; the rhizobia have multiple copies of the groEL gene which are active under different environmental conditions; the S. meliloti protein in this cluster is not associated with a groES gene; chaperonin GroEL 3523633 groEL 4033362 groEL Nitrobacter hamburgensis X14 chaperonin GroEL YP_578391.1 3521996 D 323097 CDS YP_578392.1 92118663 4033363 3523740..3524939 1 NC_007964.1 hypothetical protein 3524939 4033363 Nham_3197 Nitrobacter hamburgensis X14 hypothetical protein YP_578392.1 3523740 D 323097 CDS YP_578393.1 92118664 4033364 complement(3525170..3525577) 1 NC_007964.1 hypothetical protein 3525577 4033364 Nham_3198 Nitrobacter hamburgensis X14 hypothetical protein YP_578393.1 3525170 R 323097 CDS YP_578394.1 92118665 4033365 complement(3525855..3526865) 1 NC_007964.1 hypothetical protein 3526865 4033365 Nham_3199 Nitrobacter hamburgensis X14 hypothetical protein YP_578394.1 3525855 R 323097 CDS YP_578395.1 92118666 4033366 3527091..3527483 1 NC_007964.1 hypothetical protein 3527483 4033366 Nham_3200 Nitrobacter hamburgensis X14 hypothetical protein YP_578395.1 3527091 D 323097 CDS YP_578396.1 92118667 4033367 complement(3527501..3527959) 1 NC_007964.1 hypothetical protein 3527959 4033367 Nham_3201 Nitrobacter hamburgensis X14 hypothetical protein YP_578396.1 3527501 R 323097 CDS YP_578397.1 92118668 4033368 complement(3527983..3529299) 1 NC_007964.1 hypothetical protein 3529299 4033368 Nham_3202 Nitrobacter hamburgensis X14 hypothetical protein YP_578397.1 3527983 R 323097 CDS YP_578398.1 92118669 4033369 complement(3529296..3530654) 1 NC_007964.1 FAD linked oxidase-like protein 3530654 4033369 Nham_3203 Nitrobacter hamburgensis X14 FAD linked oxidase-like protein YP_578398.1 3529296 R 323097 CDS YP_578399.1 92118670 4033370 complement(3530742..3532235) 1 NC_007964.1 FAD linked oxidase-like protein 3532235 4033370 Nham_3204 Nitrobacter hamburgensis X14 FAD linked oxidase-like protein YP_578399.1 3530742 R 323097 CDS YP_578400.1 92118671 4033371 3532717..3533118 1 NC_007964.1 cytochrome c, class I 3533118 4033371 Nham_3205 Nitrobacter hamburgensis X14 cytochrome c, class I YP_578400.1 3532717 D 323097 CDS YP_578401.1 92118672 4033372 complement(3533127..3533810) 1 NC_007964.1 TetR family transcriptional regulator 3533810 4033372 Nham_3206 Nitrobacter hamburgensis X14 TetR family transcriptional regulator YP_578401.1 3533127 R 323097 CDS YP_578402.1 92118673 4033373 complement(3533971..3534222) 1 NC_007964.1 hypothetical protein 3534222 4033373 Nham_3207 Nitrobacter hamburgensis X14 hypothetical protein YP_578402.1 3533971 R 323097 CDS YP_578403.1 92118674 4033374 complement(3534389..3534544) 1 NC_007964.1 hypothetical protein 3534544 4033374 Nham_3208 Nitrobacter hamburgensis X14 hypothetical protein YP_578403.1 3534389 R 323097 CDS YP_578404.1 92118675 4033375 3534783..3535160 1 NC_007964.1 hypothetical protein 3535160 4033375 Nham_3209 Nitrobacter hamburgensis X14 hypothetical protein YP_578404.1 3534783 D 323097 CDS YP_578405.1 92118676 4033376 complement(3535352..3537646) 1 NC_007964.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 3537646 glyS 4033376 glyS Nitrobacter hamburgensis X14 glycyl-tRNA synthetase subunit beta YP_578405.1 3535352 R 323097 CDS YP_578406.1 92118677 4033377 complement(3537650..3538594) 1 NC_007964.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 3538594 glyQ 4033377 glyQ Nitrobacter hamburgensis X14 glycyl-tRNA synthetase subunit alpha YP_578406.1 3537650 R 323097 CDS YP_578407.1 92118678 4031991 complement(3538768..3538959) 1 NC_007964.1 hypothetical protein 3538959 4031991 Nham_3212 Nitrobacter hamburgensis X14 hypothetical protein YP_578407.1 3538768 R 323097 CDS YP_578408.1 92118679 4031992 complement(3539184..3540065) 1 NC_007964.1 peptidase S49 3540065 4031992 Nham_3213 Nitrobacter hamburgensis X14 peptidase S49 YP_578408.1 3539184 R 323097 CDS YP_578409.1 92118680 4031993 complement(3540242..3541108) 1 NC_007964.1 methyltransferase small 3541108 4031993 Nham_3214 Nitrobacter hamburgensis X14 methyltransferase small YP_578409.1 3540242 R 323097 CDS YP_578410.1 92118681 4031994 3541414..3542424 1 NC_007964.1 farnesyltranstransferase 3542424 4031994 Nham_3215 Nitrobacter hamburgensis X14 farnesyltranstransferase YP_578410.1 3541414 D 323097 CDS YP_578411.1 92118682 4031995 complement(3542539..3543450) 1 NC_007964.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 3543450 4031995 Nham_3216 Nitrobacter hamburgensis X14 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_578411.1 3542539 R 323097 CDS YP_578412.1 92118683 4031996 complement(3543601..3545382) 1 NC_007964.1 tetratricopeptide TPR_2 3545382 4031996 Nham_3217 Nitrobacter hamburgensis X14 tetratricopeptide TPR_2 YP_578412.1 3543601 R 323097 CDS YP_578413.1 92118684 4031997 complement(3545579..3547321) 1 NC_007964.1 electron-transferring-flavoprotein dehydrogenase 3547321 4031997 Nham_3218 Nitrobacter hamburgensis X14 electron-transferring-flavoprotein dehydrogenase YP_578413.1 3545579 R 323097 CDS YP_578414.1 92118685 4031998 3547563..3548432 1 NC_007964.1 phage SPO1 DNA polymerase-related protein 3548432 4031998 Nham_3219 Nitrobacter hamburgensis X14 phage SPO1 DNA polymerase-related protein YP_578414.1 3547563 D 323097 CDS YP_578415.1 92118686 4031999 complement(3548444..3549952) 1 NC_007964.1 hypothetical protein 3549952 4031999 Nham_3220 Nitrobacter hamburgensis X14 hypothetical protein YP_578415.1 3548444 R 323097 CDS YP_578416.1 92118687 4032000 complement(3550057..3550860) 1 NC_007964.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 3550860 rnhB 4032000 rnhB Nitrobacter hamburgensis X14 ribonuclease HII YP_578416.1 3550057 R 323097 CDS YP_578417.1 92118688 4032001 complement(3551026..3552189) 1 NC_007964.1 radical SAM family protein 3552189 4032001 Nham_3222 Nitrobacter hamburgensis X14 radical SAM family protein YP_578417.1 3551026 R 323097 CDS YP_578418.1 92118689 4032002 complement(3552252..3552815) 1 NC_007964.1 molybdopterin binding domain-containing protein 3552815 4032002 Nham_3223 Nitrobacter hamburgensis X14 molybdopterin binding domain-containing protein YP_578418.1 3552252 R 323097 CDS YP_578419.1 92118690 4032003 complement(3552953..3553876) 1 NC_007964.1 zinc metallopeptidase 3553876 4032003 Nham_3224 Nitrobacter hamburgensis X14 zinc metallopeptidase YP_578419.1 3552953 R 323097 CDS YP_578420.1 92118691 4032004 3554263..3555393 1 NC_007964.1 DNA methylase N-4/N-6 3555393 4032004 Nham_3225 Nitrobacter hamburgensis X14 DNA methylase N-4/N-6 YP_578420.1 3554263 D 323097 CDS YP_578421.1 92118692 4032005 3555563..3556249 1 NC_007964.1 glutathione S-transferase 3556249 4032005 Nham_3226 Nitrobacter hamburgensis X14 glutathione S-transferase YP_578421.1 3555563 D 323097 CDS YP_578422.1 92118693 4032006 complement(3556401..3557579) 1 NC_007964.1 A/G-specific adenine glycosylase 3557579 4032006 Nham_3227 Nitrobacter hamburgensis X14 A/G-specific adenine glycosylase YP_578422.1 3556401 R 323097 CDS YP_578423.1 92118694 4032007 3557609..3558088 1 NC_007964.1 hypothetical protein 3558088 4032007 Nham_3228 Nitrobacter hamburgensis X14 hypothetical protein YP_578423.1 3557609 D 323097 CDS YP_578424.1 92118695 4032008 3558195..3558857 1 NC_007964.1 twin-arginine translocation pathway signal 3558857 4032008 Nham_3229 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_578424.1 3558195 D 323097 CDS YP_578425.1 92118696 4032009 3559156..3562668 1 NC_007964.1 chromosome segregation protein SMC 3562668 4032009 Nham_3230 Nitrobacter hamburgensis X14 chromosome segregation protein SMC YP_578425.1 3559156 D 323097 CDS YP_578426.1 92118697 4031893 3562827..3563897 1 NC_007964.1 methyltransferase type 12 3563897 4031893 Nham_3231 Nitrobacter hamburgensis X14 methyltransferase type 12 YP_578426.1 3562827 D 323097 CDS YP_578427.1 92118698 4031894 complement(3563905..3564333) 1 NC_007964.1 hypothetical protein 3564333 4031894 Nham_3232 Nitrobacter hamburgensis X14 hypothetical protein YP_578427.1 3563905 R 323097 CDS YP_578428.1 92118699 4031895 3564539..3565099 1 NC_007964.1 hypothetical protein 3565099 4031895 Nham_3233 Nitrobacter hamburgensis X14 hypothetical protein YP_578428.1 3564539 D 323097 CDS YP_578429.1 92118700 4031896 3565268..3566431 1 NC_007964.1 peptidase M48, Ste24p 3566431 4031896 Nham_3234 Nitrobacter hamburgensis X14 peptidase M48, Ste24p YP_578429.1 3565268 D 323097 CDS YP_578430.1 92118701 4031897 3566646..3567404 1 NC_007964.1 hypothetical protein 3567404 4031897 Nham_3235 Nitrobacter hamburgensis X14 hypothetical protein YP_578430.1 3566646 D 323097 CDS YP_578431.1 92118702 4031898 3567526..3568203 1 NC_007964.1 hypothetical protein 3568203 4031898 Nham_3236 Nitrobacter hamburgensis X14 hypothetical protein YP_578431.1 3567526 D 323097 CDS YP_578432.1 92118703 4031899 complement(3568244..3568783) 1 NC_007964.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 3568783 4031899 Nham_3237 Nitrobacter hamburgensis X14 adenine phosphoribosyltransferase YP_578432.1 3568244 R 323097 CDS YP_578433.1 92118704 4031900 complement(3568914..3571106) 1 NC_007964.1 trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; anthranilate synthase 3571106 4031900 Nham_3238 Nitrobacter hamburgensis X14 anthranilate synthase YP_578433.1 3568914 R 323097 CDS YP_578434.1 92118705 4031901 3571301..3571924 1 NC_007964.1 YbhB and YbcL 3571924 4031901 Nham_3239 Nitrobacter hamburgensis X14 YbhB and YbcL YP_578434.1 3571301 D 323097 CDS YP_578435.1 92118706 4031902 complement(3572001..3574067) 1 NC_007964.1 cytochrome c1 3574067 4031902 Nham_3240 Nitrobacter hamburgensis X14 cytochrome c1 YP_578435.1 3572001 R 323097 CDS YP_578436.1 92118707 4031903 complement(3574130..3574657) 1 NC_007964.1 ubiquinol-cytochrome c reductase, iron-sulfur subunit 3574657 4031903 Nham_3241 Nitrobacter hamburgensis X14 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_578436.1 3574130 R 323097 CDS YP_578437.1 92118708 4031904 3574855..3575325 1 NC_007964.1 tRNA/rRNA methyltransferase SpoU 3575325 4031904 Nham_3242 Nitrobacter hamburgensis X14 tRNA/rRNA methyltransferase SpoU YP_578437.1 3574855 D 323097 CDS YP_578438.1 92118709 4031905 3575322..3575954 1 NC_007964.1 hypothetical protein 3575954 4031905 Nham_3243 Nitrobacter hamburgensis X14 hypothetical protein YP_578438.1 3575322 D 323097 CDS YP_578439.1 92118710 4031906 3576026..3576391 1 NC_007964.1 6-pyruvoyl tetrahydropterin synthase 3576391 4031906 Nham_3244 Nitrobacter hamburgensis X14 6-pyruvoyl tetrahydropterin synthase YP_578439.1 3576026 D 323097 CDS YP_578440.1 92118711 4031907 complement(3576515..3577153) 1 NC_007964.1 hypothetical protein 3577153 4031907 Nham_3245 Nitrobacter hamburgensis X14 hypothetical protein YP_578440.1 3576515 R 323097 CDS YP_578441.1 92118712 4031908 3577523..3578410 1 NC_007964.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 3578410 4031908 Nham_3246 Nitrobacter hamburgensis X14 coproporphyrinogen III oxidase YP_578441.1 3577523 D 323097 CDS YP_578442.1 92118713 4031909 complement(3578418..3579674) 1 NC_007964.1 polynucleotide adenylyltransferase 3579674 4031909 Nham_3247 Nitrobacter hamburgensis X14 polynucleotide adenylyltransferase YP_578442.1 3578418 R 323097 CDS YP_578443.1 92118714 4031910 complement(3579671..3579934) 1 NC_007964.1 hypothetical protein 3579934 4031910 Nham_3248 Nitrobacter hamburgensis X14 hypothetical protein YP_578443.1 3579671 R 323097 CDS YP_578444.1 92118715 4031911 complement(3579931..3580596) 1 NC_007964.1 NUDIX hydrolase 3580596 4031911 Nham_3249 Nitrobacter hamburgensis X14 NUDIX hydrolase YP_578444.1 3579931 R 323097 CDS YP_578445.1 92118716 4031912 complement(3580605..3581210) 1 NC_007964.1 hypothetical protein 3581210 4031912 Nham_3250 Nitrobacter hamburgensis X14 hypothetical protein YP_578445.1 3580605 R 323097 CDS YP_578446.1 92118717 4029712 3581549..3582589 1 NC_007964.1 ATPase 3582589 4029712 Nham_3251 Nitrobacter hamburgensis X14 ATPase YP_578446.1 3581549 D 323097 CDS YP_578447.1 92118718 4029713 3582589..3583530 1 NC_007964.1 hypothetical protein 3583530 4029713 Nham_3252 Nitrobacter hamburgensis X14 hypothetical protein YP_578447.1 3582589 D 323097 CDS YP_578448.1 92118719 4029714 3583527..3586343 1 NC_007964.1 double-transmembrane region-like protein 3586343 4029714 Nham_3253 Nitrobacter hamburgensis X14 double-transmembrane region-like protein YP_578448.1 3583527 D 323097 CDS YP_578449.1 92118720 4029715 3586472..3588535 1 NC_007964.1 hypothetical protein 3588535 4029715 Nham_3254 Nitrobacter hamburgensis X14 hypothetical protein YP_578449.1 3586472 D 323097 CDS YP_578450.1 92118721 4029717 3589692..3590123 1 NC_007964.1 hypothetical protein 3590123 4029717 Nham_3256 Nitrobacter hamburgensis X14 hypothetical protein YP_578450.1 3589692 D 323097 CDS YP_578451.1 92118722 4029718 3590249..3592597 1 NC_007964.1 TonB-dependent receptor, plug 3592597 4029718 Nham_3257 Nitrobacter hamburgensis X14 TonB-dependent receptor, plug YP_578451.1 3590249 D 323097 CDS YP_578452.1 92118723 4029719 complement(3592715..3593287) 1 NC_007964.1 N-acetyltransferase GCN5 3593287 4029719 Nham_3258 Nitrobacter hamburgensis X14 N-acetyltransferase GCN5 YP_578452.1 3592715 R 323097 CDS YP_578453.1 92118724 4029720 complement(3593301..3593807) 1 NC_007964.1 NUDIX hydrolase 3593807 4029720 Nham_3259 Nitrobacter hamburgensis X14 NUDIX hydrolase YP_578453.1 3593301 R 323097 CDS YP_578454.1 92118725 4029721 3593919..3594875 1 NC_007964.1 rubrerythrin 3594875 4029721 Nham_3260 Nitrobacter hamburgensis X14 rubrerythrin YP_578454.1 3593919 D 323097 CDS YP_578455.1 92118726 4029722 3595021..3595977 1 NC_007964.1 metallophosphoesterase 3595977 4029722 Nham_3261 Nitrobacter hamburgensis X14 metallophosphoesterase YP_578455.1 3595021 D 323097 CDS YP_578456.1 92118727 4029723 complement(3595994..3596332) 1 NC_007964.1 transposase 3596332 4029723 Nham_3262 Nitrobacter hamburgensis X14 transposase YP_578456.1 3595994 R 323097 CDS YP_578457.1 92118728 4029724 complement(3596380..3596748) 1 NC_007964.1 IS5 family transposase OrfA 3596748 4029724 Nham_3263 Nitrobacter hamburgensis X14 IS5 family transposase OrfA YP_578457.1 3596380 R 323097 CDS YP_578458.1 92118729 4029725 3597055..3597690 1 NC_007964.1 zinc-binding CMP/dCMP deaminase 3597690 4029725 Nham_3264 Nitrobacter hamburgensis X14 zinc-binding CMP/dCMP deaminase YP_578458.1 3597055 D 323097 CDS YP_578459.1 92118730 4029726 complement(3597812..3598186) 1 NC_007964.1 hypothetical protein 3598186 4029726 Nham_3265 Nitrobacter hamburgensis X14 hypothetical protein YP_578459.1 3597812 R 323097 CDS YP_578460.1 92118731 4029727 complement(3598294..3598557) 1 NC_007964.1 hypothetical protein 3598557 4029727 Nham_3266 Nitrobacter hamburgensis X14 hypothetical protein YP_578460.1 3598294 R 323097 CDS YP_578461.1 92118732 4029728 complement(3598554..3599030) 1 NC_007964.1 glutathione peroxidase 3599030 4029728 Nham_3267 Nitrobacter hamburgensis X14 glutathione peroxidase YP_578461.1 3598554 R 323097 CDS YP_578462.1 92118733 4029729 complement(3599078..3599335) 1 NC_007964.1 hypothetical protein 3599335 4029729 Nham_3268 Nitrobacter hamburgensis X14 hypothetical protein YP_578462.1 3599078 R 323097 CDS YP_578463.1 92118734 4029730 3599763..3602615 1 NC_007964.1 catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; catalyzes isomerization of glucose 6-phosphate and fructose 6-phosphate; bifunctional transaldolase/phosoglucose isomerase 3602615 4029730 Nham_3269 Nitrobacter hamburgensis X14 bifunctional transaldolase/phosoglucose isomerase YP_578463.1 3599763 D 323097 CDS YP_578464.1 92118735 4029464 3602897..3603910 1 NC_007964.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 3603910 4029464 Nham_3270 Nitrobacter hamburgensis X14 6-phosphogluconate dehydrogenase YP_578464.1 3602897 D 323097 CDS YP_578465.1 92118736 4029465 3603910..3605424 1 NC_007964.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 3605424 4029465 Nham_3271 Nitrobacter hamburgensis X14 glucose-6-phosphate 1-dehydrogenase YP_578465.1 3603910 D 323097 CDS YP_578466.1 92118737 4029466 3605457..3606164 1 NC_007964.1 6-phosphogluconolactonase 3606164 4029466 Nham_3272 Nitrobacter hamburgensis X14 6-phosphogluconolactonase YP_578466.1 3605457 D 323097 CDS YP_578467.1 92118738 4029467 3606161..3606697 1 NC_007964.1 carbohydrate kinase 3606697 4029467 Nham_3273 Nitrobacter hamburgensis X14 carbohydrate kinase YP_578467.1 3606161 D 323097 CDS YP_578468.1 92118739 4029468 3606694..3607497 1 NC_007964.1 Cof protein 3607497 4029468 Nham_3274 Nitrobacter hamburgensis X14 Cof protein YP_578468.1 3606694 D 323097 CDS YP_578469.1 92118740 4029469 complement(3607551..3609344) 1 NC_007964.1 glycoside hydrolase 15-related 3609344 4029469 Nham_3275 Nitrobacter hamburgensis X14 glycoside hydrolase 15-related YP_578469.1 3607551 R 323097 CDS YP_578470.1 92118741 4029470 complement(3609762..3611609) 1 NC_007964.1 diguanylate cyclase/phosphodiesterase 3611609 4029470 Nham_3276 Nitrobacter hamburgensis X14 diguanylate cyclase/phosphodiesterase YP_578470.1 3609762 R 323097 CDS YP_578471.1 92118742 4029471 complement(3611914..3612372) 1 NC_007964.1 alkylhydroperoxidase AhpD core 3612372 4029471 Nham_3277 Nitrobacter hamburgensis X14 alkylhydroperoxidase AhpD core YP_578471.1 3611914 R 323097 CDS YP_578472.1 92118743 4029472 complement(3612405..3614024) 1 NC_007964.1 EmrB/QacA family drug resistance transporter 3614024 4029472 Nham_3278 Nitrobacter hamburgensis X14 EmrB/QacA family drug resistance transporter YP_578472.1 3612405 R 323097 CDS YP_578473.1 92118744 4029473 complement(3614149..3615306) 1 NC_007964.1 secretion protein HlyD 3615306 4029473 Nham_3279 Nitrobacter hamburgensis X14 secretion protein HlyD YP_578473.1 3614149 R 323097 CDS YP_578474.1 92118745 4029474 3615457..3616368 1 NC_007964.1 LysR family transcriptional regulator 3616368 4029474 Nham_3280 Nitrobacter hamburgensis X14 LysR family transcriptional regulator YP_578474.1 3615457 D 323097 CDS YP_578475.1 92118746 4029475 complement(3616694..3617644) 1 NC_007964.1 multicopper oxidase, type 3 3617644 4029475 Nham_3281 Nitrobacter hamburgensis X14 multicopper oxidase, type 3 YP_578475.1 3616694 R 323097 CDS YP_578476.1 92118747 4029476 complement(3617710..3618066) 1 NC_007964.1 cytochrome c, class IC 3618066 4029476 Nham_3282 Nitrobacter hamburgensis X14 cytochrome c, class IC YP_578476.1 3617710 R 323097 CDS YP_578477.1 92118748 4029477 complement(3618066..3618743) 1 NC_007964.1 cytochrome c, class I 3618743 4029477 Nham_3283 Nitrobacter hamburgensis X14 cytochrome c, class I YP_578477.1 3618066 R 323097 CDS YP_578478.1 92118749 4029478 complement(3618766..3619842) 1 NC_007964.1 multicopper oxidase, type 3 3619842 4029478 Nham_3284 Nitrobacter hamburgensis X14 multicopper oxidase, type 3 YP_578478.1 3618766 R 323097 CDS YP_578479.1 92118750 4029479 complement(3620155..3620805) 1 NC_007964.1 cytochrome c biogenesis factor 3620805 4029479 Nham_3285 Nitrobacter hamburgensis X14 cytochrome c biogenesis factor YP_578479.1 3620155 R 323097 CDS YP_578480.1 92118751 4029480 complement(3621369..3621797) 1 NC_007964.1 BadM/Rrf2 family transcriptional regulator 3621797 4029480 Nham_3286 Nitrobacter hamburgensis X14 BadM/Rrf2 family transcriptional regulator YP_578480.1 3621369 R 323097 CDS YP_578481.1 92118752 4029481 3622228..3624573 1 NC_007964.1 molybdopterin oxidoreductase 3624573 4029481 Nham_3287 Nitrobacter hamburgensis X14 molybdopterin oxidoreductase YP_578481.1 3622228 D 323097 CDS YP_578482.1 92118753 4029482 3624978..3625763 1 NC_007964.1 hypothetical protein 3625763 4029482 Nham_3288 Nitrobacter hamburgensis X14 hypothetical protein YP_578482.1 3624978 D 323097 CDS YP_578483.1 92118754 4029483 3626091..3627632 1 NC_007964.1 nitrate reductase subunit beta 3627632 4029483 Nham_3289 Nitrobacter hamburgensis X14 nitrate reductase subunit beta YP_578483.1 3626091 D 323097 CDS YP_578484.1 92118755 4029368 3627933..3629042 1 NC_007964.1 transposase, IS4 3629042 4029368 Nham_3290 Nitrobacter hamburgensis X14 transposase, IS4 YP_578484.1 3627933 D 323097 CDS YP_578485.1 92118756 4029369 complement(3629834..3630226) 1 NC_007964.1 hypothetical protein 3630226 4029369 Nham_3291 Nitrobacter hamburgensis X14 hypothetical protein YP_578485.1 3629834 R 323097 CDS YP_578486.1 92118757 4029370 complement(3630226..3632541) 1 NC_007964.1 TonB-dependent siderophore receptor 3632541 4029370 Nham_3292 Nitrobacter hamburgensis X14 TonB-dependent siderophore receptor YP_578486.1 3630226 R 323097 CDS YP_578487.1 92118758 4029371 3632826..3633491 1 NC_007964.1 two component transcriptional regulator 3633491 4029371 Nham_3293 Nitrobacter hamburgensis X14 two component transcriptional regulator YP_578487.1 3632826 D 323097 CDS YP_578488.1 92118759 4029372 3633488..3634786 1 NC_007964.1 periplasmic sensor signal transduction histidine kinase 3634786 4029372 Nham_3294 Nitrobacter hamburgensis X14 periplasmic sensor signal transduction histidine kinase YP_578488.1 3633488 D 323097 CDS YP_578489.1 92118760 4029373 complement(3634767..3636164) 1 NC_007964.1 sensor signal transduction histidine kinase 3636164 4029373 Nham_3295 Nitrobacter hamburgensis X14 sensor signal transduction histidine kinase YP_578489.1 3634767 R 323097 CDS YP_578490.1 92118761 4029374 complement(3636165..3636839) 1 NC_007964.1 two component transcriptional regulator 3636839 4029374 Nham_3296 Nitrobacter hamburgensis X14 two component transcriptional regulator YP_578490.1 3636165 R 323097 CDS YP_578491.1 92118762 4029375 3637138..3638394 1 NC_007964.1 secretion protein HlyD 3638394 4029375 Nham_3297 Nitrobacter hamburgensis X14 secretion protein HlyD YP_578491.1 3637138 D 323097 CDS YP_578492.1 92118763 4029376 3638415..3641567 1 NC_007964.1 heavy metal efflux pump CzcA 3641567 4029376 Nham_3298 Nitrobacter hamburgensis X14 heavy metal efflux pump CzcA YP_578492.1 3638415 D 323097 CDS YP_578493.1 92118764 4029377 3641608..3643137 1 NC_007964.1 RND efflux system, outer membrane lipoprotein, NodT 3643137 4029377 Nham_3299 Nitrobacter hamburgensis X14 RND efflux system, outer membrane lipoprotein, NodT YP_578493.1 3641608 D 323097 CDS YP_578494.1 92118765 4029378 complement(3643373..3643978) 1 NC_007964.1 hypothetical protein 3643978 4029378 Nham_3300 Nitrobacter hamburgensis X14 hypothetical protein YP_578494.1 3643373 R 323097 CDS YP_578495.1 92118766 4029379 3644576..3646264 1 NC_007964.1 sulfatase 3646264 4029379 Nham_3301 Nitrobacter hamburgensis X14 sulfatase YP_578495.1 3644576 D 323097 CDS YP_578496.1 92118767 4029381 3646633..3648042 1 NC_007964.1 hypothetical protein 3648042 4029381 Nham_3303 Nitrobacter hamburgensis X14 hypothetical protein YP_578496.1 3646633 D 323097 CDS YP_578497.1 92118768 4029382 3648075..3648815 1 NC_007964.1 hypothetical protein 3648815 4029382 Nham_3304 Nitrobacter hamburgensis X14 hypothetical protein YP_578497.1 3648075 D 323097 CDS YP_578498.1 92118769 4029383 3649476..3649745 1 NC_007964.1 hypothetical protein 3649745 4029383 Nham_3305 Nitrobacter hamburgensis X14 hypothetical protein YP_578498.1 3649476 D 323097 CDS YP_578499.1 92118770 4029384 complement(3649923..3651488) 1 NC_007964.1 hypothetical protein 3651488 4029384 Nham_3306 Nitrobacter hamburgensis X14 hypothetical protein YP_578499.1 3649923 R 323097 CDS YP_578500.1 92118771 4029385 complement(3652661..3652951) 1 NC_007964.1 hypothetical protein 3652951 4029385 Nham_3307 Nitrobacter hamburgensis X14 hypothetical protein YP_578500.1 3652661 R 323097 CDS YP_578501.1 92118772 4029386 3653183..3653542 1 NC_007964.1 PRC-barrel protein 3653542 4029386 Nham_3308 Nitrobacter hamburgensis X14 PRC-barrel protein YP_578501.1 3653183 D 323097 CDS YP_578502.1 92118773 4032764 3654969..3655220 1 NC_007964.1 hypothetical protein 3655220 4032764 Nham_3309 Nitrobacter hamburgensis X14 hypothetical protein YP_578502.1 3654969 D 323097 CDS YP_578503.1 92118774 4032766 3655484..3656698 1 NC_007964.1 phage integrase 3656698 4032766 Nham_3311 Nitrobacter hamburgensis X14 phage integrase YP_578503.1 3655484 D 323097 CDS YP_578504.1 92118775 4032767 3656859..3657413 1 NC_007964.1 hypothetical protein 3657413 4032767 Nham_3312 Nitrobacter hamburgensis X14 hypothetical protein YP_578504.1 3656859 D 323097 CDS YP_578505.1 92118776 4032768 3657775..3658596 1 NC_007964.1 hypothetical protein 3658596 4032768 Nham_3313 Nitrobacter hamburgensis X14 hypothetical protein YP_578505.1 3657775 D 323097 CDS YP_578506.1 92118777 4032769 3659218..3659451 1 NC_007964.1 hypothetical protein 3659451 4032769 Nham_3314 Nitrobacter hamburgensis X14 hypothetical protein YP_578506.1 3659218 D 323097 CDS YP_578507.1 92118778 4032770 complement(3660608..3660838) 1 NC_007964.1 hypothetical protein 3660838 4032770 Nham_3315 Nitrobacter hamburgensis X14 hypothetical protein YP_578507.1 3660608 R 323097 CDS YP_578508.1 92118779 4032771 complement(3661039..3661479) 1 NC_007964.1 hypothetical protein 3661479 4032771 Nham_3316 Nitrobacter hamburgensis X14 hypothetical protein YP_578508.1 3661039 R 323097 CDS YP_578509.1 92118780 4032772 complement(3661479..3662243) 1 NC_007964.1 hypothetical protein 3662243 4032772 Nham_3317 Nitrobacter hamburgensis X14 hypothetical protein YP_578509.1 3661479 R 323097 CDS YP_578510.1 92118781 4032773 complement(3662883..3663968) 1 NC_007964.1 phage late control D 3663968 4032773 Nham_3318 Nitrobacter hamburgensis X14 phage late control D YP_578510.1 3662883 R 323097 CDS YP_578511.1 92118782 4032774 3664017..3664421 1 NC_007964.1 hypothetical protein 3664421 4032774 Nham_3319 Nitrobacter hamburgensis X14 hypothetical protein YP_578511.1 3664017 D 323097 CDS YP_578512.1 92118783 4032775 complement(3664418..3664630) 1 NC_007964.1 phage tail X 3664630 4032775 Nham_3320 Nitrobacter hamburgensis X14 phage tail X YP_578512.1 3664418 R 323097 CDS YP_578513.1 92118784 4032776 complement(3664637..3665062) 1 NC_007964.1 phage P2 GpU 3665062 4032776 Nham_3321 Nitrobacter hamburgensis X14 phage P2 GpU YP_578513.1 3664637 R 323097 CDS YP_578514.1 92118785 4032777 complement(3665062..3667293) 1 NC_007964.1 Phage tail tape measure protein TP901, core region 3667293 4032777 Nham_3322 Nitrobacter hamburgensis X14 Phage tail tape measure protein TP901, core region YP_578514.1 3665062 R 323097 CDS YP_578515.1 92118786 4032778 complement(3667550..3667846) 1 NC_007964.1 hypothetical protein 3667846 4032778 Nham_3323 Nitrobacter hamburgensis X14 hypothetical protein YP_578515.1 3667550 R 323097 CDS YP_578516.1 92118787 4032779 complement(3667843..3668181) 1 NC_007964.1 hypothetical protein 3668181 4032779 Nham_3324 Nitrobacter hamburgensis X14 hypothetical protein YP_578516.1 3667843 R 323097 CDS YP_578517.1 92118788 4032780 complement(3668320..3668835) 1 NC_007964.1 phage major tail tube protein 3668835 4032780 Nham_3325 Nitrobacter hamburgensis X14 phage major tail tube protein YP_578517.1 3668320 R 323097 CDS YP_578518.1 92118789 4032781 complement(3668891..3670327) 1 NC_007964.1 phage tail sheath protein 3670327 4032781 Nham_3326 Nitrobacter hamburgensis X14 phage tail sheath protein YP_578518.1 3668891 R 323097 CDS YP_578519.1 92118790 4032782 complement(3670370..3670852) 1 NC_007964.1 hypothetical protein 3670852 4032782 Nham_3327 Nitrobacter hamburgensis X14 hypothetical protein YP_578519.1 3670370 R 323097 CDS YP_578520.1 92118791 4032783 complement(3670855..3672561) 1 NC_007964.1 hypothetical protein 3672561 4032783 Nham_3328 Nitrobacter hamburgensis X14 hypothetical protein YP_578520.1 3670855 R 323097 CDS YP_578521.1 92118792 4032242 complement(3672797..3675094) 1 NC_007964.1 hypothetical protein 3675094 4032242 Nham_3329 Nitrobacter hamburgensis X14 hypothetical protein YP_578521.1 3672797 R 323097 CDS YP_578522.1 92118793 4032243 complement(3675091..3676359) 1 NC_007964.1 Phage tail protein I 3676359 4032243 Nham_3330 Nitrobacter hamburgensis X14 Phage tail protein I YP_578522.1 3675091 R 323097 CDS YP_578523.1 92118794 4032244 complement(3676356..3677267) 1 NC_007964.1 baseplate J-like protein 3677267 4032244 Nham_3331 Nitrobacter hamburgensis X14 baseplate J-like protein YP_578523.1 3676356 R 323097 CDS YP_578524.1 92118795 4032245 complement(3677267..3677764) 1 NC_007964.1 hypothetical protein 3677764 4032245 Nham_3332 Nitrobacter hamburgensis X14 hypothetical protein YP_578524.1 3677267 R 323097 CDS YP_578525.1 92118796 4032246 complement(3677837..3678364) 1 NC_007964.1 Phage-related baseplate assembly protein V 3678364 4032246 Nham_3333 Nitrobacter hamburgensis X14 Phage-related baseplate assembly protein V YP_578525.1 3677837 R 323097 CDS YP_578526.1 92118797 4032247 complement(3678460..3679152) 1 NC_007964.1 hypothetical protein 3679152 4032247 Nham_3334 Nitrobacter hamburgensis X14 hypothetical protein YP_578526.1 3678460 R 323097 CDS YP_578527.1 92118798 4032248 complement(3679152..3679514) 1 NC_007964.1 hypothetical protein 3679514 4032248 Nham_3335 Nitrobacter hamburgensis X14 hypothetical protein YP_578527.1 3679152 R 323097 CDS YP_578528.1 92118799 4032249 complement(3679527..3679853) 1 NC_007964.1 hypothetical protein 3679853 4032249 Nham_3336 Nitrobacter hamburgensis X14 hypothetical protein YP_578528.1 3679527 R 323097 CDS YP_578529.1 92118800 4032250 complement(3679901..3683440) 1 NC_007964.1 phage terminase GpA 3683440 4032250 Nham_3337 Nitrobacter hamburgensis X14 phage terminase GpA YP_578529.1 3679901 R 323097 CDS YP_578530.1 92118801 4032251 complement(3683400..3683948) 1 NC_007964.1 hypothetical protein 3683948 4032251 Nham_3338 Nitrobacter hamburgensis X14 hypothetical protein YP_578530.1 3683400 R 323097 CDS YP_578531.1 92118802 4032252 complement(3684141..3684719) 1 NC_007964.1 hypothetical protein 3684719 4032252 Nham_3339 Nitrobacter hamburgensis X14 hypothetical protein YP_578531.1 3684141 R 323097 CDS YP_578532.1 92118803 4032253 3684886..3685137 1 NC_007964.1 hypothetical protein 3685137 4032253 Nham_3340 Nitrobacter hamburgensis X14 hypothetical protein YP_578532.1 3684886 D 323097 CDS YP_578533.1 92118804 4032254 3685185..3685385 1 NC_007964.1 hypothetical protein 3685385 4032254 Nham_3341 Nitrobacter hamburgensis X14 hypothetical protein YP_578533.1 3685185 D 323097 CDS YP_578534.1 92118805 4032255 complement(3685467..3685931) 1 NC_007964.1 hypothetical protein 3685931 4032255 Nham_3342 Nitrobacter hamburgensis X14 hypothetical protein YP_578534.1 3685467 R 323097 CDS YP_578535.1 92118806 4032256 complement(3686212..3686634) 1 NC_007964.1 NusG antitermination factor 3686634 4032256 Nham_3343 Nitrobacter hamburgensis X14 NusG antitermination factor YP_578535.1 3686212 R 323097 CDS YP_578536.1 92118807 4032258 complement(3686842..3687153) 1 NC_007964.1 hypothetical protein 3687153 4032258 Nham_3345 Nitrobacter hamburgensis X14 hypothetical protein YP_578536.1 3686842 R 323097 CDS YP_578537.1 92118808 4032259 complement(3687206..3687577) 1 NC_007964.1 hypothetical protein 3687577 4032259 Nham_3346 Nitrobacter hamburgensis X14 hypothetical protein YP_578537.1 3687206 R 323097 CDS YP_578538.1 92118809 4032260 complement(3687586..3689133) 1 NC_007964.1 TOPRIM domain-containing protein 3689133 4032260 Nham_3347 Nitrobacter hamburgensis X14 TOPRIM domain-containing protein YP_578538.1 3687586 R 323097 CDS YP_578539.1 92118810 4032727 complement(3689326..3690282) 1 NC_007964.1 hypothetical protein 3690282 4032727 Nham_3348 Nitrobacter hamburgensis X14 hypothetical protein YP_578539.1 3689326 R 323097 CDS YP_578540.1 92118811 4032728 complement(3690671..3691063) 1 NC_007964.1 hypothetical protein 3691063 4032728 Nham_3349 Nitrobacter hamburgensis X14 hypothetical protein YP_578540.1 3690671 R 323097 CDS YP_578541.1 92118812 4032729 3691459..3692013 1 NC_007964.1 hypothetical protein 3692013 4032729 Nham_3350 Nitrobacter hamburgensis X14 hypothetical protein YP_578541.1 3691459 D 323097 CDS YP_578542.1 92118813 4032730 complement(3692024..3692284) 1 NC_007964.1 hypothetical protein 3692284 4032730 Nham_3351 Nitrobacter hamburgensis X14 hypothetical protein YP_578542.1 3692024 R 323097 CDS YP_578543.1 92118814 4032731 3692363..3693085 1 NC_007964.1 phage repressor 3693085 4032731 Nham_3352 Nitrobacter hamburgensis X14 phage repressor YP_578543.1 3692363 D 323097 CDS YP_578544.1 92118815 4032732 3693102..3693371 1 NC_007964.1 hypothetical protein 3693371 4032732 Nham_3353 Nitrobacter hamburgensis X14 hypothetical protein YP_578544.1 3693102 D 323097 CDS YP_578545.1 92118816 4032733 3693554..3693847 1 NC_007964.1 hypothetical protein 3693847 4032733 Nham_3354 Nitrobacter hamburgensis X14 hypothetical protein YP_578545.1 3693554 D 323097 CDS YP_578546.1 92118817 4032734 complement(3694001..3695065) 1 NC_007964.1 hypothetical protein 3695065 4032734 Nham_3355 Nitrobacter hamburgensis X14 hypothetical protein YP_578546.1 3694001 R 323097 CDS YP_578547.1 92118818 4032735 complement(3695078..3695692) 1 NC_007964.1 hypothetical protein 3695692 4032735 Nham_3356 Nitrobacter hamburgensis X14 hypothetical protein YP_578547.1 3695078 R 323097 CDS YP_578548.1 92118819 4032737 complement(3696965..3697204) 1 NC_007964.1 hypothetical protein 3697204 4032737 Nham_3357 Nitrobacter hamburgensis X14 hypothetical protein YP_578548.1 3696965 R 323097 CDS YP_578549.1 92118820 4032738 complement(3697232..3697468) 1 NC_007964.1 hypothetical protein 3697468 4032738 Nham_3358 Nitrobacter hamburgensis X14 hypothetical protein YP_578549.1 3697232 R 323097 CDS YP_578550.1 92118821 4032739 3698169..3698948 1 NC_007964.1 phage-encoded protein-like protein 3698948 4032739 Nham_3359 Nitrobacter hamburgensis X14 phage-encoded protein-like protein YP_578550.1 3698169 D 323097 CDS YP_578551.1 92118822 4032740 3699118..3699537 1 NC_007964.1 hypothetical protein 3699537 4032740 Nham_3360 Nitrobacter hamburgensis X14 hypothetical protein YP_578551.1 3699118 D 323097 CDS YP_578552.1 92118823 4032741 3699674..3700135 1 NC_007964.1 hypothetical protein 3700135 4032741 Nham_3361 Nitrobacter hamburgensis X14 hypothetical protein YP_578552.1 3699674 D 323097 CDS YP_578553.1 92118824 4032742 3700135..3700716 1 NC_007964.1 hypothetical protein 3700716 4032742 Nham_3362 Nitrobacter hamburgensis X14 hypothetical protein YP_578553.1 3700135 D 323097 CDS YP_578554.1 92118825 4032743 3700716..3701084 1 NC_007964.1 hypothetical protein 3701084 4032743 Nham_3363 Nitrobacter hamburgensis X14 hypothetical protein YP_578554.1 3700716 D 323097 CDS YP_578555.1 92118826 4032745 3701379..3702617 1 NC_007964.1 phage integrase 3702617 4032745 Nham_3365 Nitrobacter hamburgensis X14 phage integrase YP_578555.1 3701379 D 323097 CDS YP_578556.1 92118827 4029656 complement(3702988..3705114) 1 NC_007964.1 TonB-dependent receptor 3705114 4029656 Nham_3366 Nitrobacter hamburgensis X14 TonB-dependent receptor YP_578556.1 3702988 R 323097 CDS YP_578557.1 92118828 4029657 3705390..3707627 1 NC_007964.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 3707627 flhA 4029657 flhA Nitrobacter hamburgensis X14 flagellar biosynthesis protein FlhA YP_578557.1 3705390 D 323097 CDS YP_578558.1 92118829 4029658 3707950..3708150 1 NC_007964.1 hypothetical protein 3708150 4029658 Nham_3368 Nitrobacter hamburgensis X14 hypothetical protein YP_578558.1 3707950 D 323097 CDS YP_578559.1 92118830 4029659 complement(3708351..3708770) 1 NC_007964.1 flagellar export FliJ 3708770 4029659 Nham_3369 Nitrobacter hamburgensis X14 flagellar export FliJ YP_578559.1 3708351 R 323097 CDS YP_578560.1 92118831 4029660 complement(3708880..3710244) 1 NC_007964.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 3710244 fliI 4029660 fliI Nitrobacter hamburgensis X14 flagellum-specific ATP synthase YP_578560.1 3708880 R 323097 CDS YP_578561.1 92118832 4029661 3710578..3711279 1 NC_007964.1 two component transcriptional regulator 3711279 4029661 Nham_3371 Nitrobacter hamburgensis X14 two component transcriptional regulator YP_578561.1 3710578 D 323097 CDS YP_578562.1 92118833 4029662 complement(3711442..3712308) 1 NC_007964.1 chemotaxis protein CheR 3712308 4029662 Nham_3372 Nitrobacter hamburgensis X14 chemotaxis protein CheR YP_578562.1 3711442 R 323097 CDS YP_578563.1 92118834 4029663 complement(3712305..3713450) 1 NC_007964.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 3713450 4029663 Nham_3373 Nitrobacter hamburgensis X14 chemotaxis-specific methylesterase YP_578563.1 3712305 R 323097 CDS YP_578564.1 92118835 4029664 complement(3713528..3713893) 1 NC_007964.1 response regulator receiver domain-containing protein 3713893 4029664 Nham_3374 Nitrobacter hamburgensis X14 response regulator receiver domain-containing protein YP_578564.1 3713528 R 323097 CDS YP_578565.1 92118836 4029665 complement(3713966..3714436) 1 NC_007964.1 CheW protein 3714436 4029665 Nham_3375 Nitrobacter hamburgensis X14 CheW protein YP_578565.1 3713966 R 323097 CDS YP_578566.1 92118837 4029666 complement(3714448..3717183) 1 NC_007964.1 CheA signal transduction histidine kinase 3717183 4029666 Nham_3376 Nitrobacter hamburgensis X14 CheA signal transduction histidine kinase YP_578566.1 3714448 R 323097 CDS YP_578567.1 92118838 4029667 complement(3717498..3718145) 1 NC_007964.1 hypothetical protein 3718145 4029667 Nham_3377 Nitrobacter hamburgensis X14 hypothetical protein YP_578567.1 3717498 R 323097 CDS YP_578568.1 92118839 4029668 3718239..3719114 1 NC_007964.1 3'(2'),5'-bisphosphate nucleotidase 3719114 4029668 Nham_3378 Nitrobacter hamburgensis X14 3'(2'),5'-bisphosphate nucleotidase YP_578568.1 3718239 D 323097 CDS YP_578569.1 92118840 4029669 complement(3719236..3719808) 1 NC_007964.1 hypothetical protein 3719808 4029669 Nham_3379 Nitrobacter hamburgensis X14 hypothetical protein YP_578569.1 3719236 R 323097 CDS YP_578570.1 92118841 4029670 3719857..3720489 1 NC_007964.1 hypothetical protein 3720489 4029670 Nham_3380 Nitrobacter hamburgensis X14 hypothetical protein YP_578570.1 3719857 D 323097 CDS YP_578571.1 92118842 4029671 3720735..3721994 1 NC_007964.1 hypothetical protein 3721994 4029671 Nham_3381 Nitrobacter hamburgensis X14 hypothetical protein YP_578571.1 3720735 D 323097 CDS YP_578572.1 92118843 4030841 complement(3722251..3722508) 1 NC_007964.1 hypothetical protein 3722508 4030841 Nham_3382 Nitrobacter hamburgensis X14 hypothetical protein YP_578572.1 3722251 R 323097 CDS YP_578573.1 92118844 4030842 complement(3722644..3723330) 1 NC_007964.1 hypothetical protein 3723330 4030842 Nham_3383 Nitrobacter hamburgensis X14 hypothetical protein YP_578573.1 3722644 R 323097 CDS YP_578574.1 92118845 4030843 complement(3723395..3724942) 1 NC_007964.1 thiamine-pyrophosphate requiring enzyme; hypothetical protein 3724942 4030843 Nham_3384 Nitrobacter hamburgensis X14 hypothetical protein YP_578574.1 3723395 R 323097 CDS YP_578575.1 92118846 4030844 3725183..3725746 1 NC_007964.1 ErfK/YbiS/YcfS/YnhG 3725746 4030844 Nham_3385 Nitrobacter hamburgensis X14 ErfK/YbiS/YcfS/YnhG YP_578575.1 3725183 D 323097 CDS YP_578576.1 92118847 4030845 3725964..3726776 1 NC_007964.1 hypothetical protein 3726776 4030845 Nham_3386 Nitrobacter hamburgensis X14 hypothetical protein YP_578576.1 3725964 D 323097 CDS YP_578577.1 92118848 4030846 complement(3726982..3728157) 1 NC_007964.1 isovaleryl-CoA dehydrogenase 3728157 4030846 Nham_3387 Nitrobacter hamburgensis X14 isovaleryl-CoA dehydrogenase YP_578577.1 3726982 R 323097 CDS YP_578578.1 92118849 4030847 complement(3728345..3729019) 1 NC_007964.1 Hly-III-like protein 3729019 4030847 Nham_3388 Nitrobacter hamburgensis X14 Hly-III-like protein YP_578578.1 3728345 R 323097 CDS YP_578579.1 92118850 4030848 3729236..3730705 1 NC_007964.1 hypothetical protein 3730705 4030848 Nham_3389 Nitrobacter hamburgensis X14 hypothetical protein YP_578579.1 3729236 D 323097 CDS YP_578580.1 92118851 4030849 3730702..3731748 1 NC_007964.1 hypothetical protein 3731748 4030849 Nham_3390 Nitrobacter hamburgensis X14 hypothetical protein YP_578580.1 3730702 D 323097 CDS YP_578581.1 92118852 4030850 complement(3731865..3732974) 1 NC_007964.1 transposase, IS4 3732974 4030850 Nham_3391 Nitrobacter hamburgensis X14 transposase, IS4 YP_578581.1 3731865 R 323097 CDS YP_578582.1 92118853 4030851 complement(3733185..3734846) 1 NC_007964.1 glycosyl transferase family protein 3734846 4030851 Nham_3392 Nitrobacter hamburgensis X14 glycosyl transferase family protein YP_578582.1 3733185 R 323097 CDS YP_578583.1 92118854 4030852 3735005..3735433 1 NC_007964.1 hypothetical protein 3735433 4030852 Nham_3393 Nitrobacter hamburgensis X14 hypothetical protein YP_578583.1 3735005 D 323097 CDS YP_578584.1 92118855 4030853 3735666..3736874 1 NC_007964.1 twin-arginine translocation pathway signal 3736874 4030853 Nham_3394 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_578584.1 3735666 D 323097 CDS YP_578585.1 92118856 4030854 3736886..3737218 1 NC_007964.1 cytochrome c oxidoreductase subunit B 3737218 4030854 Nham_3395 Nitrobacter hamburgensis X14 cytochrome c oxidoreductase subunit B YP_578585.1 3736886 D 323097 CDS YP_578586.1 92118857 4030855 3737648..3737848 1 NC_007964.1 cold-shock DNA-binding domain-containing protein 3737848 4030855 Nham_3396 Nitrobacter hamburgensis X14 cold-shock DNA-binding domain-containing protein YP_578586.1 3737648 D 323097 CDS YP_578587.1 92118858 4030856 complement(3738065..3738751) 1 NC_007964.1 hypothetical protein 3738751 4030856 Nham_3397 Nitrobacter hamburgensis X14 hypothetical protein YP_578587.1 3738065 R 323097 CDS YP_578588.1 92118859 4030857 3738865..3741918 1 NC_007964.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 3741918 4030857 Nham_3398 Nitrobacter hamburgensis X14 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_578588.1 3738865 D 323097 CDS YP_578589.1 92118860 4030858 complement(3742114..3743157) 1 NC_007964.1 hypothetical protein 3743157 4030858 Nham_3399 Nitrobacter hamburgensis X14 hypothetical protein YP_578589.1 3742114 R 323097 CDS YP_578590.1 92118861 4030859 complement(3743525..3744022) 1 NC_007964.1 hypothetical protein 3744022 4030859 Nham_3400 Nitrobacter hamburgensis X14 hypothetical protein YP_578590.1 3743525 R 323097 CDS YP_578591.1 92118862 4033224 complement(3744025..3744891) 1 NC_007964.1 hypothetical protein 3744891 4033224 Nham_3401 Nitrobacter hamburgensis X14 hypothetical protein YP_578591.1 3744025 R 323097 CDS YP_578592.1 92118863 4033225 complement(3744913..3745524) 1 NC_007964.1 hypothetical protein 3745524 4033225 Nham_3402 Nitrobacter hamburgensis X14 hypothetical protein YP_578592.1 3744913 R 323097 CDS YP_578593.1 92118864 4033226 3745695..3746999 1 NC_007964.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 3746999 4033226 Nham_3403 Nitrobacter hamburgensis X14 nicotinate phosphoribosyltransferase YP_578593.1 3745695 D 323097 CDS YP_578594.1 92118865 4033227 complement(3747017..3748237) 1 NC_007964.1 hypothetical protein 3748237 4033227 Nham_3404 Nitrobacter hamburgensis X14 hypothetical protein YP_578594.1 3747017 R 323097 CDS YP_578595.1 92118866 4033228 complement(3748439..3748981) 1 NC_007964.1 flavin reductase-like, FMN-binding 3748981 4033228 Nham_3405 Nitrobacter hamburgensis X14 flavin reductase-like, FMN-binding YP_578595.1 3748439 R 323097 CDS YP_578596.1 92118867 4033229 complement(3748991..3750220) 1 NC_007964.1 Acyl-CoA dehydrogenase 3750220 4033229 Nham_3406 Nitrobacter hamburgensis X14 Acyl-CoA dehydrogenase YP_578596.1 3748991 R 323097 CDS YP_578597.1 92118868 4033230 3750696..3753194 1 NC_007964.1 MscS mechanosensitive ion channel 3753194 4033230 Nham_3407 Nitrobacter hamburgensis X14 MscS mechanosensitive ion channel YP_578597.1 3750696 D 323097 CDS YP_578598.1 92118869 4033231 3753281..3753523 1 NC_007964.1 hypothetical protein 3753523 4033231 Nham_3408 Nitrobacter hamburgensis X14 hypothetical protein YP_578598.1 3753281 D 323097 CDS YP_578599.1 92118870 4033232 3753520..3753870 1 NC_007964.1 ModE family transcriptional regulator 3753870 4033232 Nham_3409 Nitrobacter hamburgensis X14 ModE family transcriptional regulator YP_578599.1 3753520 D 323097 CDS YP_578600.1 92118871 4033233 3754057..3754617 1 NC_007964.1 hypothetical protein 3754617 4033233 Nham_3410 Nitrobacter hamburgensis X14 hypothetical protein YP_578600.1 3754057 D 323097 CDS YP_578601.1 92118872 4033234 3754731..3756308 1 NC_007964.1 FGGY-family pentulose kinase 3756308 4033234 Nham_3411 Nitrobacter hamburgensis X14 FGGY-family pentulose kinase YP_578601.1 3754731 D 323097 CDS YP_578602.1 92118873 4033235 complement(3756537..3758237) 1 NC_007964.1 hypothetical protein 3758237 4033235 Nham_3412 Nitrobacter hamburgensis X14 hypothetical protein YP_578602.1 3756537 R 323097 CDS YP_578603.1 92118874 4033236 3758469..3759446 1 NC_007964.1 KpsF/GutQ family protein 3759446 4033236 Nham_3413 Nitrobacter hamburgensis X14 KpsF/GutQ family protein YP_578603.1 3758469 D 323097 CDS YP_578604.1 92118875 4033237 3759523..3760632 1 NC_007964.1 transposase, IS4 3760632 4033237 Nham_3414 Nitrobacter hamburgensis X14 transposase, IS4 YP_578604.1 3759523 D 323097 CDS YP_578605.1 92118876 4033238 complement(3760881..3761918) 1 NC_007964.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 3761918 hemH 4033238 hemH Nitrobacter hamburgensis X14 ferrochelatase YP_578605.1 3760881 R 323097 CDS YP_578606.1 92118877 4033239 3762007..3762402 1 NC_007964.1 hypothetical protein 3762402 4033239 Nham_3416 Nitrobacter hamburgensis X14 hypothetical protein YP_578606.1 3762007 D 323097 CDS YP_578607.1 92118878 4033240 complement(3762475..3764565) 1 NC_007964.1 peptidyl-dipeptidase Dcp 3764565 4033240 Nham_3417 Nitrobacter hamburgensis X14 peptidyl-dipeptidase Dcp YP_578607.1 3762475 R 323097 CDS YP_578608.1 92118879 4033241 3764717..3764977 1 NC_007964.1 hypothetical protein 3764977 4033241 Nham_3418 Nitrobacter hamburgensis X14 hypothetical protein YP_578608.1 3764717 D 323097 CDS YP_578609.1 92118880 4033242 3765653..3766795 1 NC_007964.1 ornithine decarboxylase 3766795 4033242 Nham_3419 Nitrobacter hamburgensis X14 ornithine decarboxylase YP_578609.1 3765653 D 323097 CDS YP_578610.1 92118881 4031854 3766913..3767515 1 NC_007964.1 N-acetyltransferase GCN5 3767515 4031854 Nham_3420 Nitrobacter hamburgensis X14 N-acetyltransferase GCN5 YP_578610.1 3766913 D 323097 CDS YP_578611.1 92118882 4031855 3768014..3768439 1 NC_007964.1 GreA/GreB family elongation factor 3768439 4031855 Nham_3421 Nitrobacter hamburgensis X14 GreA/GreB family elongation factor YP_578611.1 3768014 D 323097 CDS YP_578612.1 92118883 4031856 3768687..3769628 1 NC_007964.1 cation diffusion facilitator family transporter 3769628 4031856 Nham_3422 Nitrobacter hamburgensis X14 cation diffusion facilitator family transporter YP_578612.1 3768687 D 323097 CDS YP_578613.1 92118884 4031857 3769778..3771211 1 NC_007964.1 homospermidine synthase 3771211 4031857 Nham_3423 Nitrobacter hamburgensis X14 homospermidine synthase YP_578613.1 3769778 D 323097 CDS YP_578614.1 92118885 4031858 complement(3771340..3772356) 1 NC_007964.1 hypothetical protein 3772356 4031858 Nham_3424 Nitrobacter hamburgensis X14 hypothetical protein YP_578614.1 3771340 R 323097 CDS YP_578615.1 92118886 4031859 complement(3772356..3773441) 1 NC_007964.1 cobalamin synthesis protein, P47K 3773441 4031859 Nham_3425 Nitrobacter hamburgensis X14 cobalamin synthesis protein, P47K YP_578615.1 3772356 R 323097 CDS YP_578616.1 92118887 4031860 complement(3773573..3774514) 1 NC_007964.1 periplasmic solute binding protein 3774514 4031860 Nham_3426 Nitrobacter hamburgensis X14 periplasmic solute binding protein YP_578616.1 3773573 R 323097 CDS YP_578617.1 92118888 4031861 complement(3774511..3775380) 1 NC_007964.1 hypothetical protein 3775380 4031861 Nham_3427 Nitrobacter hamburgensis X14 hypothetical protein YP_578617.1 3774511 R 323097 CDS YP_578618.1 92118889 4031862 complement(3775388..3776146) 1 NC_007964.1 ABC transporter 3776146 4031862 Nham_3428 Nitrobacter hamburgensis X14 ABC transporter YP_578618.1 3775388 R 323097 CDS YP_578619.1 92118890 4031863 complement(3776148..3776390) 1 NC_007964.1 hypothetical protein 3776390 4031863 Nham_3429 Nitrobacter hamburgensis X14 hypothetical protein YP_578619.1 3776148 R 323097 CDS YP_578620.1 92118891 4031864 complement(3776486..3776860) 1 NC_007964.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 3776860 4031864 Nham_3430 Nitrobacter hamburgensis X14 camphor resistance protein CrcB YP_578620.1 3776486 R 323097 CDS YP_578621.1 92118892 4031865 3776958..3777170 1 NC_007964.1 hypothetical protein 3777170 4031865 Nham_3431 Nitrobacter hamburgensis X14 hypothetical protein YP_578621.1 3776958 D 323097 CDS YP_578622.1 92118893 4031866 complement(3777137..3777736) 1 NC_007964.1 superoxide dismutase 3777736 4031866 Nham_3432 Nitrobacter hamburgensis X14 superoxide dismutase YP_578622.1 3777137 R 323097 CDS YP_578623.1 92118894 4031867 3778099..3778536 1 NC_007964.1 hypothetical protein 3778536 4031867 Nham_3433 Nitrobacter hamburgensis X14 hypothetical protein YP_578623.1 3778099 D 323097 CDS YP_578624.1 92118895 4031868 complement(3778703..3781204) 1 NC_007964.1 heavy metal translocating P-type ATPase 3781204 4031868 Nham_3434 Nitrobacter hamburgensis X14 heavy metal translocating P-type ATPase YP_578624.1 3778703 R 323097 CDS YP_578625.1 92118896 4031869 3781260..3781535 1 NC_007964.1 hypothetical protein 3781535 4031869 Nham_3435 Nitrobacter hamburgensis X14 hypothetical protein YP_578625.1 3781260 D 323097 CDS YP_578626.1 92118897 4031870 complement(3782141..3782350) 1 NC_007964.1 cold-shock DNA-binding domain-containing protein 3782350 4031870 Nham_3436 Nitrobacter hamburgensis X14 cold-shock DNA-binding domain-containing protein YP_578626.1 3782141 R 323097 CDS YP_578627.1 92118898 4031871 complement(3782446..3782976) 1 NC_007964.1 ISSpo6, transposase OrfB 3782976 4031871 Nham_3437 Nitrobacter hamburgensis X14 ISSpo6, transposase OrfB YP_578627.1 3782446 R 323097 CDS YP_578628.1 92118899 4031872 complement(3783023..3783400) 1 NC_007964.1 ISSpo6, transposase orf A 3783400 4031872 Nham_3438 Nitrobacter hamburgensis X14 ISSpo6, transposase orf A YP_578628.1 3783023 R 323097 CDS YP_578629.1 92118900 4031873 complement(3784284..3786083) 1 NC_007964.1 ATP-dependent DNA helicase RecQ 3786083 4031873 Nham_3439 Nitrobacter hamburgensis X14 ATP-dependent DNA helicase RecQ YP_578629.1 3784284 R 323097 CDS YP_578630.1 92118901 4031091 complement(3787286..3788395) 1 NC_007964.1 transposase, IS4 3788395 4031091 Nham_3440 Nitrobacter hamburgensis X14 transposase, IS4 YP_578630.1 3787286 R 323097 CDS YP_578631.1 92118902 4031092 complement(3788472..3788717) 1 NC_007964.1 hypothetical protein 3788717 4031092 Nham_3441 Nitrobacter hamburgensis X14 hypothetical protein YP_578631.1 3788472 R 323097 CDS YP_578632.1 92118903 4031094 complement(3790107..3791180) 1 NC_007964.1 C4-dicarboxylate transporter/malic acid transport protein 3791180 4031094 Nham_3443 Nitrobacter hamburgensis X14 C4-dicarboxylate transporter/malic acid transport protein YP_578632.1 3790107 R 323097 CDS YP_578633.1 92118904 4031095 complement(3791298..3792551) 1 NC_007964.1 major facilitator transporter 3792551 4031095 Nham_3444 Nitrobacter hamburgensis X14 major facilitator transporter YP_578633.1 3791298 R 323097 CDS YP_578634.1 92118905 4031096 complement(3792816..3793493) 1 NC_007964.1 nitrate reductase subunit gamma 3793493 4031096 Nham_3445 Nitrobacter hamburgensis X14 nitrate reductase subunit gamma YP_578634.1 3792816 R 323097 CDS YP_578635.1 92118906 4031097 complement(3793528..3794556) 1 NC_007964.1 nitrate reductase molybdenum cofactor assembly chaperone 3794556 4031097 Nham_3446 Nitrobacter hamburgensis X14 nitrate reductase molybdenum cofactor assembly chaperone YP_578635.1 3793528 R 323097 CDS YP_578636.1 92118907 4031098 complement(3794687..3796228) 1 NC_007964.1 nitrate reductase subunit beta 3796228 4031098 Nham_3447 Nitrobacter hamburgensis X14 nitrate reductase subunit beta YP_578636.1 3794687 R 323097 CDS YP_578637.1 92118908 4031099 complement(3796295..3796978) 1 NC_007964.1 peptidylprolyl isomerase, FKBP-type 3796978 4031099 Nham_3448 Nitrobacter hamburgensis X14 peptidylprolyl isomerase, FKBP-type YP_578637.1 3796295 R 323097 CDS YP_578638.1 92118909 4031100 complement(3796972..3800616) 1 NC_007964.1 nitrate reductase subunit alpha 3800616 4031100 Nham_3449 Nitrobacter hamburgensis X14 nitrate reductase subunit alpha YP_578638.1 3796972 R 323097 CDS YP_578639.1 92118910 4031101 complement(3800616..3801596) 1 NC_007964.1 cytochrome c, class I 3801596 4031101 Nham_3450 Nitrobacter hamburgensis X14 cytochrome c, class I YP_578639.1 3800616 R 323097 CDS YP_578640.1 92118911 4031102 3802194..3802940 1 NC_007964.1 hypothetical protein 3802940 4031102 Nham_3451 Nitrobacter hamburgensis X14 hypothetical protein YP_578640.1 3802194 D 323097 CDS YP_578641.1 92118912 4031103 3803496..3805472 1 NC_007964.1 cytochrome-c oxidase 3805472 4031103 Nham_3452 Nitrobacter hamburgensis X14 cytochrome-c oxidase YP_578641.1 3803496 D 323097 CDS YP_578642.1 92118913 4031104 3805469..3806086 1 NC_007964.1 cytochrome o ubiquinol oxidase subunit III 3806086 4031104 Nham_3453 Nitrobacter hamburgensis X14 cytochrome o ubiquinol oxidase subunit III YP_578642.1 3805469 D 323097 CDS YP_578643.1 92118914 4031105 3806088..3806429 1 NC_007964.1 cytochrome C oxidase subunit IV 3806429 4031105 Nham_3454 Nitrobacter hamburgensis X14 cytochrome C oxidase subunit IV YP_578643.1 3806088 D 323097 CDS YP_578644.1 92118915 4031106 3807239..3807433 1 NC_007964.1 hypothetical protein 3807433 4031106 Nham_3455 Nitrobacter hamburgensis X14 hypothetical protein YP_578644.1 3807239 D 323097 CDS YP_578645.1 92118916 4031107 complement(3807802..3808551) 1 NC_007964.1 Surfeit locus 1 3808551 4031107 Nham_3456 Nitrobacter hamburgensis X14 Surfeit locus 1 YP_578645.1 3807802 R 323097 CDS YP_578646.1 92118917 4029978 complement(3808548..3808937) 1 NC_007964.1 hypothetical protein 3808937 4029978 Nham_3457 Nitrobacter hamburgensis X14 hypothetical protein YP_578646.1 3808548 R 323097 CDS YP_578647.1 92118918 4029979 complement(3809012..3809866) 1 NC_007964.1 cytochrome c oxidase subunit III 3809866 4029979 Nham_3458 Nitrobacter hamburgensis X14 cytochrome c oxidase subunit III YP_578647.1 3809012 R 323097 CDS YP_578648.1 92118919 4029980 complement(3809969..3810619) 1 NC_007964.1 involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 3810619 4029980 Nham_3459 Nitrobacter hamburgensis X14 cytochrome C oxidase assembly protein YP_578648.1 3809969 R 323097 CDS YP_578649.1 92118920 4029981 complement(3810625..3810789) 1 NC_007964.1 CoxF protein 3810789 4029981 Nham_3460 Nitrobacter hamburgensis X14 CoxF protein YP_578649.1 3810625 R 323097 CDS YP_578650.1 92118921 4029982 complement(3810806..3811792) 1 NC_007964.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 3811792 4029982 Nham_3461 Nitrobacter hamburgensis X14 protoheme IX farnesyltransferase YP_578650.1 3810806 R 323097 CDS YP_578651.1 92118922 4029983 complement(3811856..3813469) 1 NC_007964.1 cytochrome-c oxidase 3813469 4029983 Nham_3462 Nitrobacter hamburgensis X14 cytochrome-c oxidase YP_578651.1 3811856 R 323097 CDS YP_578652.1 92118923 4029984 complement(3813552..3814409) 1 NC_007964.1 cytochrome-c oxidase 3814409 4029984 Nham_3463 Nitrobacter hamburgensis X14 cytochrome-c oxidase YP_578652.1 3813552 R 323097 CDS YP_578653.1 92118924 4029985 3815225..3815686 1 NC_007964.1 hypothetical protein 3815686 4029985 Nham_3464 Nitrobacter hamburgensis X14 hypothetical protein YP_578653.1 3815225 D 323097 CDS YP_578654.1 92118925 4029986 complement(3815753..3817021) 1 NC_007964.1 hypothetical protein 3817021 4029986 Nham_3465 Nitrobacter hamburgensis X14 hypothetical protein YP_578654.1 3815753 R 323097 CDS YP_578655.1 92118926 4029987 complement(3817415..3817804) 1 NC_007964.1 hypothetical protein 3817804 4029987 Nham_3466 Nitrobacter hamburgensis X14 hypothetical protein YP_578655.1 3817415 R 323097 CDS YP_578656.1 92118927 4029988 3818080..3818352 1 NC_007964.1 hypothetical protein 3818352 4029988 Nham_3467 Nitrobacter hamburgensis X14 hypothetical protein YP_578656.1 3818080 D 323097 CDS YP_578657.1 92118928 4029989 3818574..3819641 1 NC_007964.1 cobalamin synthesis protein, P47K 3819641 4029989 Nham_3468 Nitrobacter hamburgensis X14 cobalamin synthesis protein, P47K YP_578657.1 3818574 D 323097 CDS YP_578658.1 92118929 4029990 complement(3820229..3820540) 1 NC_007964.1 hypothetical protein 3820540 4029990 Nham_3469 Nitrobacter hamburgensis X14 hypothetical protein YP_578658.1 3820229 R 323097 CDS YP_578659.1 92118930 4029991 complement(3820727..3820924) 1 NC_007964.1 hypothetical protein 3820924 4029991 Nham_3470 Nitrobacter hamburgensis X14 hypothetical protein YP_578659.1 3820727 R 323097 CDS YP_578660.1 92118931 4029992 complement(3821837..3822586) 1 NC_007964.1 hypothetical protein 3822586 4029992 Nham_3471 Nitrobacter hamburgensis X14 hypothetical protein YP_578660.1 3821837 R 323097 CDS YP_578661.1 92118932 4029993 complement(3822733..3823017) 1 NC_007964.1 hypothetical protein 3823017 4029993 Nham_3472 Nitrobacter hamburgensis X14 hypothetical protein YP_578661.1 3822733 R 323097 CDS YP_578662.1 92118933 4029994 3823294..3823701 1 NC_007964.1 hypothetical protein 3823701 4029994 Nham_3473 Nitrobacter hamburgensis X14 hypothetical protein YP_578662.1 3823294 D 323097 CDS YP_578663.1 92118934 4029995 complement(3824641..3825201) 1 NC_007964.1 cytochrome c, class I 3825201 4029995 Nham_3474 Nitrobacter hamburgensis X14 cytochrome c, class I YP_578663.1 3824641 R 323097 CDS YP_578664.1 92118935 4029996 complement(3825651..3826916) 1 NC_007964.1 diaminopimelate decarboxylase 3826916 4029996 Nham_3475 Nitrobacter hamburgensis X14 diaminopimelate decarboxylase YP_578664.1 3825651 R 323097 CDS YP_578665.1 92118936 4029997 complement(3826929..3827336) 1 NC_007964.1 hypothetical protein 3827336 4029997 Nham_3476 Nitrobacter hamburgensis X14 hypothetical protein YP_578665.1 3826929 R 323097 CDS YP_578666.1 92118937 4029330 complement(3827399..3828796) 1 NC_007964.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 3828796 4029330 Nham_3477 Nitrobacter hamburgensis X14 argininosuccinate lyase YP_578666.1 3827399 R 323097 CDS YP_578667.1 92118938 4029331 3828905..3829576 1 NC_007964.1 thioredoxin-like protein 3829576 4029331 Nham_3478 Nitrobacter hamburgensis X14 thioredoxin-like protein YP_578667.1 3828905 D 323097 CDS YP_578668.1 92118939 4029332 complement(3829590..3830471) 1 NC_007964.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 3830471 4029332 Nham_3479 Nitrobacter hamburgensis X14 3-hydroxybutyryl-CoA dehydrogenase YP_578668.1 3829590 R 323097 CDS YP_578669.1 92118940 4029333 complement(3830578..3831522) 1 NC_007964.1 electron transfer flavoprotein subunit alpha 3831522 4029333 Nham_3480 Nitrobacter hamburgensis X14 electron transfer flavoprotein subunit alpha YP_578669.1 3830578 R 323097 CDS YP_578670.1 92118941 4029334 complement(3831522..3832271) 1 NC_007964.1 electron transfer flavoprotein subunit beta 3832271 4029334 Nham_3481 Nitrobacter hamburgensis X14 electron transfer flavoprotein subunit beta YP_578670.1 3831522 R 323097 CDS YP_578671.1 92118942 4029335 complement(3832506..3833078) 1 NC_007964.1 ATP--cobalamin adenosyltransferase 3833078 4029335 Nham_3482 Nitrobacter hamburgensis X14 ATP--cobalamin adenosyltransferase YP_578671.1 3832506 R 323097 CDS YP_578672.1 92118943 4029336 complement(3833122..3833319) 1 NC_007964.1 hypothetical protein 3833319 4029336 Nham_3483 Nitrobacter hamburgensis X14 hypothetical protein YP_578672.1 3833122 R 323097 CDS YP_578673.1 92118944 4029337 3833465..3834358 1 NC_007964.1 ribonuclease BN 3834358 4029337 Nham_3484 Nitrobacter hamburgensis X14 ribonuclease BN YP_578673.1 3833465 D 323097 CDS YP_578674.1 92118945 4029338 complement(3834285..3835541) 1 NC_007964.1 histidine kinase 3835541 4029338 Nham_3485 Nitrobacter hamburgensis X14 histidine kinase YP_578674.1 3834285 R 323097 CDS YP_578675.1 92118946 4029339 complement(3835663..3836535) 1 NC_007964.1 this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase 3836535 4029339 Nham_3486 Nitrobacter hamburgensis X14 glutamyl-Q tRNA(Asp) synthetase YP_578675.1 3835663 R 323097 CDS YP_578676.1 92118947 4029340 3836582..3837235 1 NC_007964.1 HhH-GPD 3837235 4029340 Nham_3487 Nitrobacter hamburgensis X14 HhH-GPD YP_578676.1 3836582 D 323097 CDS YP_578677.1 92118948 4029341 3837406..3838932 1 NC_007964.1 PAS/PAC sensor hybrid histidine kinase 3838932 4029341 Nham_3488 Nitrobacter hamburgensis X14 PAS/PAC sensor hybrid histidine kinase YP_578677.1 3837406 D 323097 CDS YP_578678.1 92118949 4029342 3838929..3839219 1 NC_007964.1 hypothetical protein 3839219 4029342 Nham_3489 Nitrobacter hamburgensis X14 hypothetical protein YP_578678.1 3838929 D 323097 CDS YP_578679.1 92118950 4029343 3839216..3839773 1 NC_007964.1 HNH endonuclease 3839773 4029343 Nham_3490 Nitrobacter hamburgensis X14 HNH endonuclease YP_578679.1 3839216 D 323097 CDS YP_578680.1 92118951 4029344 3839907..3840878 1 NC_007964.1 hypothetical protein 3840878 4029344 Nham_3491 Nitrobacter hamburgensis X14 hypothetical protein YP_578680.1 3839907 D 323097 CDS YP_578681.1 92118952 4029345 complement(3840954..3841406) 1 NC_007964.1 BadM/Rrf2 family transcriptional regulator 3841406 4029345 Nham_3492 Nitrobacter hamburgensis X14 BadM/Rrf2 family transcriptional regulator YP_578681.1 3840954 R 323097 CDS YP_578682.1 92118953 4029346 3841701..3842123 1 NC_007964.1 hypothetical protein 3842123 4029346 Nham_3493 Nitrobacter hamburgensis X14 hypothetical protein YP_578682.1 3841701 D 323097 CDS YP_578683.1 92118954 4029347 complement(3842131..3842724) 1 NC_007964.1 DSBA oxidoreductase 3842724 4029347 Nham_3494 Nitrobacter hamburgensis X14 DSBA oxidoreductase YP_578683.1 3842131 R 323097 CDS YP_578684.1 92118955 4029348 complement(3842809..3843282) 1 NC_007964.1 hypothetical protein 3843282 4029348 Nham_3495 Nitrobacter hamburgensis X14 hypothetical protein YP_578684.1 3842809 R 323097 CDS YP_578685.1 92118956 4029426 3843535..3843789 1 NC_007964.1 hypothetical protein 3843789 4029426 Nham_3496 Nitrobacter hamburgensis X14 hypothetical protein YP_578685.1 3843535 D 323097 CDS YP_578686.1 92118957 4029427 complement(3843904..3844476) 1 NC_007964.1 disulfide bond formation protein DsbB 3844476 4029427 Nham_3497 Nitrobacter hamburgensis X14 disulfide bond formation protein DsbB YP_578686.1 3843904 R 323097 CDS YP_578687.1 92118958 4029429 3845212..3845949 1 NC_007964.1 hypothetical protein 3845949 4029429 Nham_3498 Nitrobacter hamburgensis X14 hypothetical protein YP_578687.1 3845212 D 323097 CDS YP_578688.1 92118959 4029430 3845897..3846436 1 NC_007964.1 hypothetical protein 3846436 4029430 Nham_3499 Nitrobacter hamburgensis X14 hypothetical protein YP_578688.1 3845897 D 323097 CDS YP_578689.1 92118960 4029431 3846446..3848545 1 NC_007964.1 TonB-dependent receptor 3848545 4029431 Nham_3500 Nitrobacter hamburgensis X14 TonB-dependent receptor YP_578689.1 3846446 D 323097 CDS YP_578690.1 92118961 4029432 complement(3848761..3849351) 1 NC_007964.1 hypothetical protein 3849351 4029432 Nham_3501 Nitrobacter hamburgensis X14 hypothetical protein YP_578690.1 3848761 R 323097 CDS YP_578691.1 92118962 4029433 complement(3849472..3850458) 1 NC_007964.1 alcohol dehydrogenase GroES-like protein 3850458 4029433 Nham_3502 Nitrobacter hamburgensis X14 alcohol dehydrogenase GroES-like protein YP_578691.1 3849472 R 323097 CDS YP_578692.1 92118963 4029434 complement(3850507..3851817) 1 NC_007964.1 major facilitator transporter 3851817 4029434 Nham_3503 Nitrobacter hamburgensis X14 major facilitator transporter YP_578692.1 3850507 R 323097 CDS YP_578693.1 92118964 4029435 complement(3851951..3853351) 1 NC_007964.1 cell wall hydrolase SleB 3853351 4029435 Nham_3504 Nitrobacter hamburgensis X14 cell wall hydrolase SleB YP_578693.1 3851951 R 323097 CDS YP_578694.1 92118965 4029436 complement(3853659..3856472) 1 NC_007964.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 3856472 4029436 Nham_3505 Nitrobacter hamburgensis X14 pyruvate phosphate dikinase YP_578694.1 3853659 R 323097 CDS YP_578695.1 92118966 4029437 complement(3856821..3858737) 1 NC_007964.1 ATP-dependent metalloprotease FtsH 3858737 4029437 Nham_3506 Nitrobacter hamburgensis X14 ATP-dependent metalloprotease FtsH YP_578695.1 3856821 R 323097 CDS YP_578696.1 92118967 4029438 complement(3859237..3860274) 1 NC_007964.1 tRNA(Ile)-lysidine synthetase-like protein 3860274 4029438 Nham_3507 Nitrobacter hamburgensis X14 tRNA(Ile)-lysidine synthetase-like protein YP_578696.1 3859237 R 323097 CDS YP_578697.1 92118968 4029439 complement(3860565..3861575) 1 NC_007964.1 TPR repeat-containing protein 3861575 4029439 Nham_3508 Nitrobacter hamburgensis X14 TPR repeat-containing protein YP_578697.1 3860565 R 323097 CDS YP_578698.1 92118969 4029440 complement(3861858..3862352) 1 NC_007964.1 OmpA/MotB 3862352 4029440 Nham_3509 Nitrobacter hamburgensis X14 OmpA/MotB YP_578698.1 3861858 R 323097 CDS YP_578699.1 92118970 4029441 complement(3862659..3863402) 1 NC_007964.1 hypothetical protein 3863402 4029441 Nham_3510 Nitrobacter hamburgensis X14 hypothetical protein YP_578699.1 3862659 R 323097 CDS YP_578700.1 92118971 4029442 complement(3863619..3865964) 1 NC_007964.1 diguanylate cyclase/phosphodiesterase 3865964 4029442 Nham_3511 Nitrobacter hamburgensis X14 diguanylate cyclase/phosphodiesterase YP_578700.1 3863619 R 323097 CDS YP_578701.1 92118972 4029443 complement(3866266..3867618) 1 NC_007964.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 3867618 tolB 4029443 tolB Nitrobacter hamburgensis X14 translocation protein TolB YP_578701.1 3866266 R 323097 CDS YP_578702.1 92118973 4029444 complement(3867664..3868608) 1 NC_007964.1 TolA 3868608 4029444 Nham_3513 Nitrobacter hamburgensis X14 TolA YP_578702.1 3867664 R 323097 CDS YP_578703.1 92118974 4030784 complement(3868610..3869065) 1 NC_007964.1 biopolymer transport protein ExbD/TolR 3869065 4030784 Nham_3514 Nitrobacter hamburgensis X14 biopolymer transport protein ExbD/TolR YP_578703.1 3868610 R 323097 CDS YP_578704.1 92118975 4030785 complement(3869097..3869810) 1 NC_007964.1 MotA/TolQ/ExbB proton channel 3869810 4030785 Nham_3515 Nitrobacter hamburgensis X14 MotA/TolQ/ExbB proton channel YP_578704.1 3869097 R 323097 CDS YP_578705.1 92118976 4030786 complement(3870286..3870783) 1 NC_007964.1 hypothetical protein 3870783 4030786 Nham_3516 Nitrobacter hamburgensis X14 hypothetical protein YP_578705.1 3870286 R 323097 CDS YP_578706.1 92118977 4030787 complement(3871051..3871761) 1 NC_007964.1 TetR family transcriptional regulator 3871761 4030787 Nham_3517 Nitrobacter hamburgensis X14 TetR family transcriptional regulator YP_578706.1 3871051 R 323097 CDS YP_578707.1 92118978 4030788 complement(3871909..3872328) 1 NC_007964.1 hypothetical protein 3872328 4030788 Nham_3518 Nitrobacter hamburgensis X14 hypothetical protein YP_578707.1 3871909 R 323097 CDS YP_578708.1 92118979 4030789 complement(3872558..3873031) 1 NC_007964.1 3-demethylubiquinone-9 3-methyltransferase 3873031 4030789 Nham_3519 Nitrobacter hamburgensis X14 3-demethylubiquinone-9 3-methyltransferase YP_578708.1 3872558 R 323097 CDS YP_578709.1 92118980 4030790 complement(3873262..3873723) 1 NC_007964.1 4-hydroxybenzoyl-CoA thioesterase 3873723 4030790 Nham_3520 Nitrobacter hamburgensis X14 4-hydroxybenzoyl-CoA thioesterase YP_578709.1 3873262 R 323097 CDS YP_578710.1 92118981 4030791 complement(3873720..3874763) 1 NC_007964.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 3874763 ruvB 4030791 ruvB Nitrobacter hamburgensis X14 Holliday junction DNA helicase RuvB YP_578710.1 3873720 R 323097 CDS YP_578711.1 92118982 4030792 complement(3874760..3875380) 1 NC_007964.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 3875380 ruvA 4030792 ruvA Nitrobacter hamburgensis X14 Holliday junction DNA helicase RuvA YP_578711.1 3874760 R 323097 CDS YP_578712.1 92118983 4030793 complement(3875377..3875913) 1 NC_007964.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 3875913 ruvC 4030793 ruvC Nitrobacter hamburgensis X14 Holliday junction resolvase YP_578712.1 3875377 R 323097 CDS YP_578713.1 92118984 4030794 complement(3875999..3877363) 1 NC_007964.1 magnesium transporter 3877363 4030794 Nham_3524 Nitrobacter hamburgensis X14 magnesium transporter YP_578713.1 3875999 R 323097 CDS YP_578714.1 92118985 4030795 complement(3877650..3878396) 1 NC_007964.1 hypothetical protein 3878396 4030795 Nham_3525 Nitrobacter hamburgensis X14 hypothetical protein YP_578714.1 3877650 R 323097 CDS YP_578715.1 92118986 4030796 complement(3878544..3879077) 1 NC_007964.1 hypothetical protein 3879077 4030796 Nham_3526 Nitrobacter hamburgensis X14 hypothetical protein YP_578715.1 3878544 R 323097 CDS YP_578716.1 92118987 4030797 complement(3879081..3879902) 1 NC_007964.1 hypothetical protein 3879902 4030797 Nham_3527 Nitrobacter hamburgensis X14 hypothetical protein YP_578716.1 3879081 R 323097 CDS YP_578717.1 92118988 4030798 complement(3879905..3880492) 1 NC_007964.1 5-formyltetrahydrofolate cyclo-ligase 3880492 4030798 Nham_3528 Nitrobacter hamburgensis X14 5-formyltetrahydrofolate cyclo-ligase YP_578717.1 3879905 R 323097 CDS YP_578718.1 92118989 4030799 complement(3881086..3881469) 1 NC_007964.1 hypothetical protein 3881469 4030799 Nham_3529 Nitrobacter hamburgensis X14 hypothetical protein YP_578718.1 3881086 R 323097 CDS YP_578719.1 92118990 4030800 complement(3881466..3881798) 1 NC_007964.1 hypothetical protein 3881798 4030800 Nham_3530 Nitrobacter hamburgensis X14 hypothetical protein YP_578719.1 3881466 R 323097 CDS YP_578720.1 92118991 4030801 3882035..3884071 1 NC_007964.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 3884071 4030801 Nham_3531 Nitrobacter hamburgensis X14 transketolase YP_578720.1 3882035 D 323097 CDS YP_578721.1 92118992 4030802 3884219..3885226 1 NC_007964.1 glyceraldehyde-3-phosphate dehydrogenase, type I 3885226 4030802 Nham_3532 Nitrobacter hamburgensis X14 glyceraldehyde-3-phosphate dehydrogenase, type I YP_578721.1 3884219 D 323097 CDS YP_578722.1 92118993 4030516 3885368..3886564 1 NC_007964.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 3886564 pgk 4030516 pgk Nitrobacter hamburgensis X14 phosphoglycerate kinase YP_578722.1 3885368 D 323097 CDS YP_578723.1 92118994 4030517 3886676..3887707 1 NC_007964.1 fructose-bisphosphate aldolase 3887707 4030517 Nham_3534 Nitrobacter hamburgensis X14 fructose-bisphosphate aldolase YP_578723.1 3886676 D 323097 CDS YP_578724.1 92118995 4030518 3888057..3888758 1 NC_007964.1 thiamine monophosphate synthase 3888758 4030518 Nham_3535 Nitrobacter hamburgensis X14 thiamine monophosphate synthase YP_578724.1 3888057 D 323097 CDS YP_578725.1 92118996 4030519 3888755..3889828 1 NC_007964.1 Sel1 3889828 4030519 Nham_3536 Nitrobacter hamburgensis X14 Sel1 YP_578725.1 3888755 D 323097 CDS YP_578726.1 92118997 4030520 3889894..3890685 1 NC_007964.1 inositol-1(or 4)-monophosphatase 3890685 4030520 Nham_3537 Nitrobacter hamburgensis X14 inositol-1(or 4)-monophosphatase YP_578726.1 3889894 D 323097 CDS YP_578727.1 92118998 4030521 complement(3890901..3894071) 1 NC_007964.1 hydrophobe/amphiphile efflux-1 HAE1 3894071 4030521 Nham_3538 Nitrobacter hamburgensis X14 hydrophobe/amphiphile efflux-1 HAE1 YP_578727.1 3890901 R 323097 CDS YP_578728.1 92118999 4030522 complement(3894075..3895283) 1 NC_007964.1 secretion protein HlyD 3895283 4030522 Nham_3539 Nitrobacter hamburgensis X14 secretion protein HlyD YP_578728.1 3894075 R 323097 CDS YP_578729.1 92119000 4030523 3895374..3895739 1 NC_007964.1 hypothetical protein 3895739 4030523 Nham_3540 Nitrobacter hamburgensis X14 hypothetical protein YP_578729.1 3895374 D 323097 CDS YP_578730.1 92119001 4030524 3895759..3896820 1 NC_007964.1 hypothetical protein 3896820 4030524 Nham_3541 Nitrobacter hamburgensis X14 hypothetical protein YP_578730.1 3895759 D 323097 CDS YP_578731.1 92119002 4030525 3896935..3897966 1 NC_007964.1 hypothetical protein 3897966 4030525 Nham_3542 Nitrobacter hamburgensis X14 hypothetical protein YP_578731.1 3896935 D 323097 CDS YP_578732.1 92119003 4030526 3898011..3898472 1 NC_007964.1 N-acetyltransferase GCN5 3898472 4030526 Nham_3543 Nitrobacter hamburgensis X14 N-acetyltransferase GCN5 YP_578732.1 3898011 D 323097 CDS YP_578733.1 92119004 4030527 complement(3898586..3900475) 1 NC_007964.1 ABC transporter ATP-binding/permease 3900475 4030527 Nham_3544 Nitrobacter hamburgensis X14 ABC transporter ATP-binding/permease YP_578733.1 3898586 R 323097 CDS YP_578734.1 92119005 4030528 3900628..3900855 1 NC_007964.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 3900855 rpmE 4030528 rpmE Nitrobacter hamburgensis X14 50S ribosomal protein L31 YP_578734.1 3900628 D 323097 CDS YP_578735.1 92119006 4030529 complement(3901012..3901533) 1 NC_007964.1 hypothetical protein 3901533 4030529 Nham_3546 Nitrobacter hamburgensis X14 hypothetical protein YP_578735.1 3901012 R 323097 CDS YP_578736.1 92119007 4030530 complement(3901910..3902101) 1 NC_007964.1 hypothetical protein 3902101 4030530 Nham_3547 Nitrobacter hamburgensis X14 hypothetical protein YP_578736.1 3901910 R 323097 CDS YP_578737.1 92119008 4030531 3902307..3903305 1 NC_007964.1 zinc-binding alcohol dehydrogenase 3903305 4030531 Nham_3548 Nitrobacter hamburgensis X14 zinc-binding alcohol dehydrogenase YP_578737.1 3902307 D 323097 CDS YP_578738.1 92119009 4030532 3903543..3906425 1 NC_007964.1 diguanylate cyclase/phosphodiesterase 3906425 4030532 Nham_3549 Nitrobacter hamburgensis X14 diguanylate cyclase/phosphodiesterase YP_578738.1 3903543 D 323097 CDS YP_578739.1 92119010 4030533 complement(3906636..3907286) 1 NC_007964.1 hypothetical protein 3907286 4030533 Nham_3550 Nitrobacter hamburgensis X14 hypothetical protein YP_578739.1 3906636 R 323097 CDS YP_578740.1 92119011 4030534 3907423..3908265 1 NC_007964.1 hypothetical protein 3908265 4030534 Nham_3551 Nitrobacter hamburgensis X14 hypothetical protein YP_578740.1 3907423 D 323097 CDS YP_578741.1 92119012 4030535 complement(3908520..3909629) 1 NC_007964.1 transposase, IS4 3909629 4030535 Nham_3552 Nitrobacter hamburgensis X14 transposase, IS4 YP_578741.1 3908520 R 323097 CDS YP_578742.1 92119013 4032590 3909882..3911258 1 NC_007964.1 polysaccharide biosynthesis protein 3911258 4032590 Nham_3553 Nitrobacter hamburgensis X14 polysaccharide biosynthesis protein YP_578742.1 3909882 D 323097 CDS YP_578743.1 92119014 4032591 complement(3911386..3912174) 1 NC_007964.1 3-hydroxybutyrate dehydrogenase 3912174 4032591 Nham_3554 Nitrobacter hamburgensis X14 3-hydroxybutyrate dehydrogenase YP_578743.1 3911386 R 323097 CDS YP_578744.1 92119015 4032592 complement(3912208..3913362) 1 NC_007964.1 patatin 3913362 4032592 Nham_3555 Nitrobacter hamburgensis X14 patatin YP_578744.1 3912208 R 323097 CDS YP_578745.1 92119016 4032593 complement(3913455..3913961) 1 NC_007964.1 Allergen V5/Tpx-1 related 3913961 4032593 Nham_3556 Nitrobacter hamburgensis X14 Allergen V5/Tpx-1 related YP_578745.1 3913455 R 323097 CDS YP_578746.1 92119017 4032594 complement(3914024..3915073) 1 NC_007964.1 sulfate transporter permease 3915073 4032594 Nham_3557 Nitrobacter hamburgensis X14 sulfate transporter permease YP_578746.1 3914024 R 323097 CDS YP_578747.1 92119018 4032595 complement(3915063..3915941) 1 NC_007964.1 sulfate ABC transporter permease 3915941 4032595 Nham_3558 Nitrobacter hamburgensis X14 sulfate ABC transporter permease YP_578747.1 3915063 R 323097 CDS YP_578748.1 92119019 4032596 complement(3915944..3916780) 1 NC_007964.1 sulfate ABC transporter permease 3916780 4032596 Nham_3559 Nitrobacter hamburgensis X14 sulfate ABC transporter permease YP_578748.1 3915944 R 323097 CDS YP_578749.1 92119020 4032597 complement(3916805..3917794) 1 NC_007964.1 thiosulfate-binding protein 3917794 4032597 Nham_3560 Nitrobacter hamburgensis X14 thiosulfate-binding protein YP_578749.1 3916805 R 323097 CDS YP_578750.1 92119021 4032598 complement(3917919..3918683) 1 NC_007964.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 3918683 4032598 Nham_3561 Nitrobacter hamburgensis X14 phosphoadenosine phosphosulfate reductase YP_578750.1 3917919 R 323097 CDS YP_578751.1 92119022 4032599 complement(3918680..3920116) 1 NC_007964.1 uroporphyrin-III C-methyltransferase 3920116 4032599 Nham_3562 Nitrobacter hamburgensis X14 uroporphyrin-III C-methyltransferase YP_578751.1 3918680 R 323097 CDS YP_578752.1 92119023 4032600 3920373..3921179 1 NC_007964.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 3921179 4032600 Nham_3563 Nitrobacter hamburgensis X14 sulfate adenylyltransferase subunit 2 YP_578752.1 3920373 D 323097 CDS YP_578753.1 92119024 4032601 3921204..3923129 1 NC_007964.1 sulfate adenylyltransferase 3923129 4032601 Nham_3564 Nitrobacter hamburgensis X14 sulfate adenylyltransferase YP_578753.1 3921204 D 323097 CDS YP_578754.1 92119025 4032602 3923332..3925515 1 NC_007964.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 3925515 4032602 Nham_3565 Nitrobacter hamburgensis X14 malate synthase G YP_578754.1 3923332 D 323097 CDS YP_578755.1 92119026 4032603 complement(3925606..3925761) 1 NC_007964.1 hypothetical protein 3925761 4032603 Nham_3566 Nitrobacter hamburgensis X14 hypothetical protein YP_578755.1 3925606 R 323097 CDS YP_578756.1 92119027 4032604 3925974..3926345 1 NC_007964.1 hypothetical protein 3926345 4032604 Nham_3567 Nitrobacter hamburgensis X14 hypothetical protein YP_578756.1 3925974 D 323097 CDS YP_578757.1 92119028 4032605 3926497..3926940 1 NC_007964.1 hypothetical protein 3926940 4032605 Nham_3568 Nitrobacter hamburgensis X14 hypothetical protein YP_578757.1 3926497 D 323097 CDS YP_578758.1 92119029 4032606 complement(3926977..3927378) 1 NC_007964.1 hypothetical protein 3927378 4032606 Nham_3569 Nitrobacter hamburgensis X14 hypothetical protein YP_578758.1 3926977 R 323097 CDS YP_578759.1 92119030 4032607 complement(3927712..3928470) 1 NC_007964.1 in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator 3928470 4032607 Nham_3570 Nitrobacter hamburgensis X14 two-component response regulator YP_578759.1 3927712 R 323097 CDS YP_578760.1 92119031 4032608 3928709..3928930 1 NC_007964.1 hypothetical protein 3928930 4032608 Nham_3571 Nitrobacter hamburgensis X14 hypothetical protein YP_578760.1 3928709 D 323097 CDS YP_578761.1 92119032 4030900 3928930..3929475 1 NC_007964.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 3929475 4030900 Nham_3572 Nitrobacter hamburgensis X14 RNA polymerase sigma factor YP_578761.1 3928930 D 323097 CDS YP_578762.1 92119033 4030901 complement(3929544..3931214) 1 NC_007964.1 signal transduction histidine kinase 3931214 4030901 Nham_3573 Nitrobacter hamburgensis X14 signal transduction histidine kinase YP_578762.1 3929544 R 323097 CDS YP_578763.1 92119034 4030902 complement(3931578..3932849) 1 NC_007964.1 MiaB-like tRNA modifying enzyme 3932849 4030902 Nham_3574 Nitrobacter hamburgensis X14 MiaB-like tRNA modifying enzyme YP_578763.1 3931578 R 323097 CDS YP_578764.1 92119035 4030903 complement(3932849..3933721) 1 NC_007964.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 3933721 dapF 4030903 dapF Nitrobacter hamburgensis X14 diaminopimelate epimerase YP_578764.1 3932849 R 323097 CDS YP_578765.1 92119036 4030904 3933984..3934712 1 NC_007964.1 transcription activator, effector binding 3934712 4030904 Nham_3576 Nitrobacter hamburgensis X14 transcription activator, effector binding YP_578765.1 3933984 D 323097 CDS YP_578766.1 92119037 4030905 3934709..3935428 1 NC_007964.1 hypothetical protein 3935428 4030905 Nham_3577 Nitrobacter hamburgensis X14 hypothetical protein YP_578766.1 3934709 D 323097 CDS YP_578767.1 92119038 4030906 3935731..3937266 1 NC_007964.1 signal recognition particle protein 3937266 4030906 Nham_3578 Nitrobacter hamburgensis X14 signal recognition particle protein YP_578767.1 3935731 D 323097 CDS YP_578768.1 92119039 4030907 3937487..3937819 1 NC_007964.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 3937819 rpsP 4030907 rpsP Nitrobacter hamburgensis X14 30S ribosomal protein S16 YP_578768.1 3937487 D 323097 CDS YP_578769.1 92119040 4030908 3937832..3938353 1 NC_007964.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 3938353 rimM 4030908 rimM Nitrobacter hamburgensis X14 16S rRNA-processing protein RimM YP_578769.1 3937832 D 323097 CDS YP_578770.1 92119041 4030909 3938487..3939203 1 NC_007964.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 3939203 trmD 4030909 trmD Nitrobacter hamburgensis X14 tRNA (guanine-N(1)-)-methyltransferase YP_578770.1 3938487 D 323097 CDS YP_578771.1 92119042 4030910 3939431..3939811 1 NC_007964.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 3939811 rplS 4030910 rplS Nitrobacter hamburgensis X14 50S ribosomal protein L19 YP_578771.1 3939431 D 323097 CDS YP_578772.1 92119043 4030911 3939942..3940100 1 NC_007964.1 hypothetical protein 3940100 4030911 Nham_3583 Nitrobacter hamburgensis X14 hypothetical protein YP_578772.1 3939942 D 323097 CDS YP_578773.1 92119044 4030912 3940177..3941583 1 NC_007964.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 3941583 4030912 Nham_3584 Nitrobacter hamburgensis X14 isopropylmalate isomerase large subunit YP_578773.1 3940177 D 323097 CDS YP_578774.1 92119045 4030914 3942057..3942578 1 NC_007964.1 hypothetical protein 3942578 4030914 Nham_3586 Nitrobacter hamburgensis X14 hypothetical protein YP_578774.1 3942057 D 323097 CDS YP_578775.1 92119046 4030915 complement(3942694..3943005) 1 NC_007964.1 hypothetical protein 3943005 4030915 Nham_3587 Nitrobacter hamburgensis X14 hypothetical protein YP_578775.1 3942694 R 323097 CDS YP_578776.1 92119047 4030916 complement(3943237..3943539) 1 NC_007964.1 hypothetical protein 3943539 4030916 Nham_3588 Nitrobacter hamburgensis X14 hypothetical protein YP_578776.1 3943237 R 323097 CDS YP_578777.1 92119048 4030917 complement(3943871..3944194) 1 NC_007964.1 hypothetical protein 3944194 4030917 Nham_3589 Nitrobacter hamburgensis X14 hypothetical protein YP_578777.1 3943871 R 323097 CDS YP_578778.1 92119049 4030918 3944323..3944724 1 NC_007964.1 hypothetical protein 3944724 4030918 Nham_3590 Nitrobacter hamburgensis X14 hypothetical protein YP_578778.1 3944323 D 323097 CDS YP_578779.1 92119050 4030919 3944793..3945398 1 NC_007964.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 3945398 leuD 4030919 leuD Nitrobacter hamburgensis X14 isopropylmalate isomerase small subunit YP_578779.1 3944793 D 323097 CDS YP_578780.1 92119051 4031525 3945592..3946254 1 NC_007964.1 carbonate dehydratase 3946254 4031525 Nham_3592 Nitrobacter hamburgensis X14 carbonate dehydratase YP_578780.1 3945592 D 323097 CDS YP_578781.1 92119052 4031526 complement(3946397..3947431) 1 NC_007964.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 3947431 4031526 Nham_3593 Nitrobacter hamburgensis X14 aspartate-semialdehyde dehydrogenase YP_578781.1 3946397 R 323097 CDS YP_578782.1 92119053 4031527 3947944..3948336 1 NC_007964.1 hypothetical protein 3948336 4031527 Nham_3594 Nitrobacter hamburgensis X14 hypothetical protein YP_578782.1 3947944 D 323097 CDS YP_578783.1 92119054 4031528 complement(3948421..3949533) 1 NC_007964.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 3949533 4031528 Nham_3595 Nitrobacter hamburgensis X14 3-isopropylmalate dehydrogenase YP_578783.1 3948421 R 323097 CDS YP_578784.1 92119055 4031529 3949783..3950979 1 NC_007964.1 major facilitator transporter 3950979 4031529 Nham_3596 Nitrobacter hamburgensis X14 major facilitator transporter YP_578784.1 3949783 D 323097 CDS YP_578785.1 92119056 4031530 complement(3951109..3951618) 1 NC_007964.1 superoxide dismutase, copper/zinc binding 3951618 4031530 Nham_3597 Nitrobacter hamburgensis X14 superoxide dismutase, copper/zinc binding YP_578785.1 3951109 R 323097 CDS YP_578786.1 92119057 4031531 complement(3951704..3952489) 1 NC_007964.1 oxidoreductase, molybdopterin binding 3952489 4031531 Nham_3598 Nitrobacter hamburgensis X14 oxidoreductase, molybdopterin binding YP_578786.1 3951704 R 323097 CDS YP_578787.1 92119058 4031532 complement(3952501..3953130) 1 NC_007964.1 hypothetical protein 3953130 4031532 Nham_3599 Nitrobacter hamburgensis X14 hypothetical protein YP_578787.1 3952501 R 323097 CDS YP_578788.1 92119059 4031533 3953456..3954973 1 NC_007964.1 catalyzes the formation of malonyl-CoA from malonate and CoA; malonyl-CoA synthase 3954973 4031533 Nham_3600 Nitrobacter hamburgensis X14 malonyl-CoA synthase YP_578788.1 3953456 D 323097 CDS YP_578789.1 92119060 4031534 complement(3955166..3956665) 1 NC_007964.1 RND efflux system, outer membrane lipoprotein, NodT 3956665 4031534 Nham_3601 Nitrobacter hamburgensis X14 RND efflux system, outer membrane lipoprotein, NodT YP_578789.1 3955166 R 323097 CDS YP_578790.1 92119061 4031535 complement(3956791..3960081) 1 NC_007964.1 acriflavin resistance protein 3960081 4031535 Nham_3602 Nitrobacter hamburgensis X14 acriflavin resistance protein YP_578790.1 3956791 R 323097 CDS YP_578791.1 92119062 4031536 complement(3960078..3963191) 1 NC_007964.1 acriflavin resistance protein 3963191 4031536 Nham_3603 Nitrobacter hamburgensis X14 acriflavin resistance protein YP_578791.1 3960078 R 323097 CDS YP_578792.1 92119063 4031537 complement(3963188..3964456) 1 NC_007964.1 secretion protein HlyD 3964456 4031537 Nham_3604 Nitrobacter hamburgensis X14 secretion protein HlyD YP_578792.1 3963188 R 323097 CDS YP_578793.1 92119064 4031538 3964967..3965869 1 NC_007964.1 secretion protein HlyD 3965869 4031538 Nham_3605 Nitrobacter hamburgensis X14 secretion protein HlyD YP_578793.1 3964967 D 323097 CDS YP_578794.1 92119065 4031539 complement(3965875..3966753) 1 NC_007964.1 peptidase C14, caspase catalytic subunit p20 3966753 4031539 Nham_3606 Nitrobacter hamburgensis X14 peptidase C14, caspase catalytic subunit p20 YP_578794.1 3965875 R 323097 CDS YP_578795.1 92119066 4031540 3967166..3968902 1 NC_007964.1 hypothetical protein 3968902 4031540 Nham_3607 Nitrobacter hamburgensis X14 hypothetical protein YP_578795.1 3967166 D 323097 CDS YP_578796.1 92119067 4031541 3969225..3969839 1 NC_007964.1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 3969839 4031541 Nham_3608 Nitrobacter hamburgensis X14 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_578796.1 3969225 D 323097 CDS YP_578797.1 92119068 4031542 complement(3969897..3971819) 1 NC_007964.1 AsmA 3971819 4031542 Nham_3609 Nitrobacter hamburgensis X14 AsmA YP_578797.1 3969897 R 323097 CDS YP_578798.1 92119069 4031543 complement(3972017..3975139) 1 NC_007964.1 acriflavin resistance protein 3975139 4031543 Nham_3610 Nitrobacter hamburgensis X14 acriflavin resistance protein YP_578798.1 3972017 R 323097 CDS YP_578799.1 92119070 4030380 complement(3975139..3976026) 1 NC_007964.1 secretion protein HlyD 3976026 4030380 Nham_3611 Nitrobacter hamburgensis X14 secretion protein HlyD YP_578799.1 3975139 R 323097 CDS YP_578800.1 92119071 4030381 3976505..3977935 1 NC_007964.1 major facilitator transporter 3977935 4030381 Nham_3612 Nitrobacter hamburgensis X14 major facilitator transporter YP_578800.1 3976505 D 323097 CDS YP_578801.1 92119072 4030382 3977935..3978744 1 NC_007964.1 HAD family hydrolase 3978744 4030382 Nham_3613 Nitrobacter hamburgensis X14 HAD family hydrolase YP_578801.1 3977935 D 323097 CDS YP_578802.1 92119073 4030383 3978741..3980534 1 NC_007964.1 glycoside hydrolase 15-related 3980534 4030383 Nham_3614 Nitrobacter hamburgensis X14 glycoside hydrolase 15-related YP_578802.1 3978741 D 323097 CDS YP_578803.1 92119074 4030384 3980728..3982200 1 NC_007964.1 Alpha,alpha-trehalose-phosphate synthase 3982200 4030384 Nham_3615 Nitrobacter hamburgensis X14 Alpha,alpha-trehalose-phosphate synthase YP_578803.1 3980728 D 323097 CDS YP_578804.1 92119075 4030386 3982985..3983383 1 NC_007964.1 succinate dehydrogenase, cytochrome b subunit 3983383 4030386 Nham_3616 Nitrobacter hamburgensis X14 succinate dehydrogenase, cytochrome b subunit YP_578804.1 3982985 D 323097 CDS YP_578805.1 92119076 4030387 3983386..3983787 1 NC_007964.1 succinate dehydrogenase, cytochrome b subunit 3983787 4030387 Nham_3617 Nitrobacter hamburgensis X14 succinate dehydrogenase, cytochrome b subunit YP_578805.1 3983386 D 323097 CDS YP_578806.1 92119077 4030388 3983791..3985614 1 NC_007964.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 3985614 sdhA 4030388 sdhA Nitrobacter hamburgensis X14 succinate dehydrogenase flavoprotein subunit YP_578806.1 3983791 D 323097 CDS YP_578807.1 92119078 4030389 3985715..3986497 1 NC_007964.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 3986497 sdhB 4030389 sdhB Nitrobacter hamburgensis X14 succinate dehydrogenase iron-sulfur subunit YP_578807.1 3985715 D 323097 CDS YP_578808.1 92119079 4030390 complement(3986636..3987061) 1 NC_007964.1 Allergen V5/Tpx-1 related 3987061 4030390 Nham_3620 Nitrobacter hamburgensis X14 Allergen V5/Tpx-1 related YP_578808.1 3986636 R 323097 CDS YP_578809.1 92119080 4030391 3987121..3987354 1 NC_007964.1 hypothetical protein 3987354 4030391 Nham_3621 Nitrobacter hamburgensis X14 hypothetical protein YP_578809.1 3987121 D 323097 CDS YP_578810.1 92119081 4030392 3987585..3989606 1 NC_007964.1 OmpA/MotB 3989606 4030392 Nham_3622 Nitrobacter hamburgensis X14 OmpA/MotB YP_578810.1 3987585 D 323097 CDS YP_578811.1 92119082 4030393 complement(3989844..3991073) 1 NC_007964.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 3991073 4030393 Nham_3623 Nitrobacter hamburgensis X14 argininosuccinate synthase YP_578811.1 3989844 R 323097 CDS YP_578812.1 92119083 4030394 complement(3991149..3991937) 1 NC_007964.1 PA-phosphatase-like phosphoesterase 3991937 4030394 Nham_3624 Nitrobacter hamburgensis X14 PA-phosphatase-like phosphoesterase YP_578812.1 3991149 R 323097 CDS YP_578813.1 92119084 4030395 complement(3991986..3992462) 1 NC_007964.1 hypothetical protein 3992462 4030395 Nham_3625 Nitrobacter hamburgensis X14 hypothetical protein YP_578813.1 3991986 R 323097 CDS YP_578814.1 92119085 4030396 complement(3992531..3993724) 1 NC_007964.1 hypothetical protein 3993724 4030396 Nham_3626 Nitrobacter hamburgensis X14 hypothetical protein YP_578814.1 3992531 R 323097 CDS YP_578815.1 92119086 4030397 complement(3993864..3994412) 1 NC_007964.1 hypothetical protein 3994412 4030397 Nham_3627 Nitrobacter hamburgensis X14 hypothetical protein YP_578815.1 3993864 R 323097 CDS YP_578816.1 92119087 4030398 complement(3994901..3995329) 1 NC_007964.1 hypothetical protein 3995329 4030398 Nham_3628 Nitrobacter hamburgensis X14 hypothetical protein YP_578816.1 3994901 R 323097 CDS YP_578817.1 92119088 4031353 complement(3995397..3995702) 1 NC_007964.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 3995702 phhB 4031353 phhB Nitrobacter hamburgensis X14 pterin-4-alpha-carbinolamine dehydratase YP_578817.1 3995397 R 323097 CDS YP_578818.1 92119089 4031354 3996066..3996467 1 NC_007964.1 4Fe-4S ferredoxin 3996467 4031354 Nham_3630 Nitrobacter hamburgensis X14 4Fe-4S ferredoxin YP_578818.1 3996066 D 323097 CDS YP_578819.1 92119090 4031355 3996516..3996890 1 NC_007964.1 hypothetical protein 3996890 4031355 Nham_3631 Nitrobacter hamburgensis X14 hypothetical protein YP_578819.1 3996516 D 323097 CDS YP_578820.1 92119091 4031356 complement(3997078..3998994) 1 NC_007964.1 molecular chaperone; heat shock protein 90 3998994 4031356 Nham_3632 Nitrobacter hamburgensis X14 heat shock protein 90 YP_578820.1 3997078 R 323097 CDS YP_578821.1 92119092 4031357 3999464..4000105 1 NC_007964.1 PepSY-associated TM helix family protein 4000105 4031357 Nham_3633 Nitrobacter hamburgensis X14 PepSY-associated TM helix family protein YP_578821.1 3999464 D 323097 CDS YP_578822.1 92119093 4031358 4000116..4000628 1 NC_007964.1 hypothetical protein 4000628 4031358 Nham_3634 Nitrobacter hamburgensis X14 hypothetical protein YP_578822.1 4000116 D 323097 CDS YP_578823.1 92119094 4031359 4000692..4001492 1 NC_007964.1 hypothetical protein 4001492 4031359 Nham_3635 Nitrobacter hamburgensis X14 hypothetical protein YP_578823.1 4000692 D 323097 CDS YP_578824.1 92119095 4031360 4001501..4002523 1 NC_007964.1 ApbE-like lipoprotein 4002523 4031360 Nham_3636 Nitrobacter hamburgensis X14 ApbE-like lipoprotein YP_578824.1 4001501 D 323097 CDS YP_578825.1 92119096 4031361 complement(4002573..4003259) 1 NC_007964.1 hydroxylase 4003259 4031361 Nham_3637 Nitrobacter hamburgensis X14 hydroxylase YP_578825.1 4002573 R 323097 CDS YP_578826.1 92119097 4031362 complement(4003344..4005809) 1 NC_007964.1 TonB-dependent siderophore receptor 4005809 4031362 Nham_3638 Nitrobacter hamburgensis X14 TonB-dependent siderophore receptor YP_578826.1 4003344 R 323097 CDS YP_578827.1 92119098 4031363 4006159..4007259 1 NC_007964.1 MotA/TolQ/ExbB proton channel 4007259 4031363 Nham_3639 Nitrobacter hamburgensis X14 MotA/TolQ/ExbB proton channel YP_578827.1 4006159 D 323097 CDS YP_578828.1 92119099 4031364 4007265..4007717 1 NC_007964.1 biopolymer transport protein ExbD/TolR 4007717 4031364 Nham_3640 Nitrobacter hamburgensis X14 biopolymer transport protein ExbD/TolR YP_578828.1 4007265 D 323097 CDS YP_578829.1 92119100 4031365 4007714..4008469 1 NC_007964.1 TonB-like 4008469 4031365 Nham_3641 Nitrobacter hamburgensis X14 TonB-like YP_578829.1 4007714 D 323097 CDS YP_578830.1 92119101 4031366 4008466..4010877 1 NC_007964.1 SecA DEAD-like protein 4010877 4031366 Nham_3642 Nitrobacter hamburgensis X14 SecA DEAD-like protein YP_578830.1 4008466 D 323097 CDS YP_578831.1 92119102 4031367 complement(4010946..4012550) 1 NC_007964.1 cytochrome-c oxidase 4012550 4031367 Nham_3643 Nitrobacter hamburgensis X14 cytochrome-c oxidase YP_578831.1 4010946 R 323097 CDS YP_578832.1 92119103 4031368 complement(4013099..4014001) 1 NC_007964.1 LysR family transcriptional regulator 4014001 4031368 Nham_3644 Nitrobacter hamburgensis X14 LysR family transcriptional regulator YP_578832.1 4013099 R 323097 CDS YP_578833.1 92119104 4031369 4014279..4015484 1 NC_007964.1 extracellular ligand-binding receptor 4015484 4031369 Nham_3645 Nitrobacter hamburgensis X14 extracellular ligand-binding receptor YP_578833.1 4014279 D 323097 CDS YP_578834.1 92119105 4031370 4015626..4016489 1 NC_007964.1 inner-membrane translocator 4016489 4031370 Nham_3646 Nitrobacter hamburgensis X14 inner-membrane translocator YP_578834.1 4015626 D 323097 CDS YP_578835.1 92119106 4031371 4016486..4017433 1 NC_007964.1 inner-membrane translocator 4017433 4031371 Nham_3647 Nitrobacter hamburgensis X14 inner-membrane translocator YP_578835.1 4016486 D 323097 CDS YP_578836.1 92119107 4029866 4017430..4018164 1 NC_007964.1 ABC transporter 4018164 4029866 Nham_3648 Nitrobacter hamburgensis X14 ABC transporter YP_578836.1 4017430 D 323097 CDS YP_578837.1 92119108 4029867 4018161..4018892 1 NC_007964.1 ABC transporter 4018892 4029867 Nham_3649 Nitrobacter hamburgensis X14 ABC transporter YP_578837.1 4018161 D 323097 CDS YP_578838.1 92119109 4029868 complement(4018998..4020008) 1 NC_007964.1 tRNA-dihydrouridine synthase A 4020008 4029868 Nham_3650 Nitrobacter hamburgensis X14 tRNA-dihydrouridine synthase A YP_578838.1 4018998 R 323097 CDS YP_578839.1 92119110 4029869 complement(4020097..4020438) 1 NC_007964.1 hypothetical protein 4020438 4029869 Nham_3651 Nitrobacter hamburgensis X14 hypothetical protein YP_578839.1 4020097 R 323097 CDS YP_578840.1 92119111 4029870 4020764..4021096 1 NC_007964.1 hypothetical protein 4021096 4029870 Nham_3652 Nitrobacter hamburgensis X14 hypothetical protein YP_578840.1 4020764 D 323097 CDS YP_578841.1 92119112 4029871 complement(4022758..4023075) 1 NC_007964.1 hypothetical protein 4023075 4029871 Nham_3653 Nitrobacter hamburgensis X14 hypothetical protein YP_578841.1 4022758 R 323097 CDS YP_578842.1 92119113 4029872 complement(4023250..4024359) 1 NC_007964.1 transposase, IS4 4024359 4029872 Nham_3654 Nitrobacter hamburgensis X14 transposase, IS4 YP_578842.1 4023250 R 323097 CDS YP_578843.1 92119114 4029873 complement(4024499..4024651) 1 NC_007964.1 hypothetical protein 4024651 4029873 Nham_3655 Nitrobacter hamburgensis X14 hypothetical protein YP_578843.1 4024499 R 323097 CDS YP_578844.1 92119115 4029874 complement(4025182..4025628) 1 NC_007964.1 cupin 2, barrel 4025628 4029874 Nham_3656 Nitrobacter hamburgensis X14 cupin 2, barrel YP_578844.1 4025182 R 323097 CDS YP_578845.1 92119116 4029875 4025978..4026406 1 NC_007964.1 cupin 4026406 4029875 Nham_3657 Nitrobacter hamburgensis X14 cupin YP_578845.1 4025978 D 323097 CDS YP_578846.1 92119117 4029876 4026483..4026725 1 NC_007964.1 hypothetical protein 4026725 4029876 Nham_3658 Nitrobacter hamburgensis X14 hypothetical protein YP_578846.1 4026483 D 323097 CDS YP_578847.1 92119118 4029877 4028038..4028259 1 NC_007964.1 hypothetical protein 4028259 4029877 Nham_3659 Nitrobacter hamburgensis X14 hypothetical protein YP_578847.1 4028038 D 323097 CDS YP_578848.1 92119119 4029878 4028449..4029660 1 NC_007964.1 response regulator receiver/diguanylate phosphodiesterase 4029660 4029878 Nham_3660 Nitrobacter hamburgensis X14 response regulator receiver/diguanylate phosphodiesterase YP_578848.1 4028449 D 323097 CDS YP_578849.1 92119120 4029879 complement(4030320..4032656) 1 NC_007964.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 4032656 4029879 Nham_3661 Nitrobacter hamburgensis X14 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_578849.1 4030320 R 323097 CDS YP_578850.1 92119121 4029881 complement(4033015..4033683) 1 NC_007964.1 hypothetical protein 4033683 4029881 Nham_3662 Nitrobacter hamburgensis X14 hypothetical protein YP_578850.1 4033015 R 323097 CDS YP_578851.1 92119122 4029883 4034208..4037108 1 NC_007964.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 4037108 4029883 Nham_3663 Nitrobacter hamburgensis X14 ribonucleotide-diphosphate reductase subunit alpha YP_578851.1 4034208 D 323097 CDS YP_578852.1 92119123 4033262 4037099..4038349 1 NC_007964.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 4038349 4033262 Nham_3664 Nitrobacter hamburgensis X14 ribonucleotide-diphosphate reductase subunit beta YP_578852.1 4037099 D 323097 CDS YP_578853.1 92119124 4033263 complement(4038477..4038923) 1 NC_007964.1 3-demethylubiquinone-9 3-methyltransferase 4038923 4033263 Nham_3665 Nitrobacter hamburgensis X14 3-demethylubiquinone-9 3-methyltransferase YP_578853.1 4038477 R 323097 CDS YP_578854.1 92119125 4033264 4039055..4039525 1 NC_007964.1 MarR family transcriptional regulator 4039525 4033264 Nham_3666 Nitrobacter hamburgensis X14 MarR family transcriptional regulator YP_578854.1 4039055 D 323097 CDS YP_578855.1 92119126 4033265 complement(4039556..4040596) 1 NC_007964.1 beta-lactamase-like 4040596 4033265 Nham_3667 Nitrobacter hamburgensis X14 beta-lactamase-like YP_578855.1 4039556 R 323097 CDS YP_578856.1 92119127 4033266 complement(4040686..4041222) 1 NC_007964.1 hypothetical protein 4041222 4033266 Nham_3668 Nitrobacter hamburgensis X14 hypothetical protein YP_578856.1 4040686 R 323097 CDS YP_578857.1 92119128 4033267 complement(4041209..4041661) 1 NC_007964.1 hypothetical protein 4041661 4033267 Nham_3669 Nitrobacter hamburgensis X14 hypothetical protein YP_578857.1 4041209 R 323097 CDS YP_578858.1 92119129 4033268 complement(4041670..4042131) 1 NC_007964.1 hypothetical protein 4042131 4033268 Nham_3670 Nitrobacter hamburgensis X14 hypothetical protein YP_578858.1 4041670 R 323097 CDS YP_578859.1 92119130 4033269 complement(4042128..4043870) 1 NC_007964.1 twin-arginine translocation pathway signal 4043870 4033269 Nham_3671 Nitrobacter hamburgensis X14 twin-arginine translocation pathway signal YP_578859.1 4042128 R 323097 CDS YP_578860.1 92119131 4033270 complement(4044117..4044443) 1 NC_007964.1 hypothetical protein 4044443 4033270 Nham_3672 Nitrobacter hamburgensis X14 hypothetical protein YP_578860.1 4044117 R 323097 CDS YP_578861.1 92119132 4033271 complement(4044440..4045300) 1 NC_007964.1 sulfur oxidation protein 4045300 4033271 Nham_3673 Nitrobacter hamburgensis X14 sulfur oxidation protein YP_578861.1 4044440 R 323097 CDS YP_578862.1 92119133 4033272 complement(4045330..4045641) 1 NC_007964.1 sulfur oxidation protein 4045641 4033272 Nham_3674 Nitrobacter hamburgensis X14 sulfur oxidation protein YP_578862.1 4045330 R 323097 CDS YP_578863.1 92119134 4033273 complement(4045666..4046163) 1 NC_007964.1 sulfur oxidation protein 4046163 4033273 Nham_3675 Nitrobacter hamburgensis X14 sulfur oxidation protein YP_578863.1 4045666 R 323097 CDS YP_578864.1 92119135 4033274 complement(4046190..4046561) 1 NC_007964.1 cytochrome c, class I 4046561 4033274 Nham_3676 Nitrobacter hamburgensis X14 cytochrome c, class I YP_578864.1 4046190 R 323097 CDS YP_578865.1 92119136 4033275 4046817..4047497 1 NC_007964.1 hypothetical protein 4047497 4033275 Nham_3677 Nitrobacter hamburgensis X14 hypothetical protein YP_578865.1 4046817 D 323097 CDS YP_578866.1 92119137 4033276 complement(4047705..4048202) 1 NC_007964.1 glyoxalase/bleomycin resistance protein/dioxygenase 4048202 4033276 Nham_3678 Nitrobacter hamburgensis X14 glyoxalase/bleomycin resistance protein/dioxygenase YP_578866.1 4047705 R 323097 CDS YP_578867.1 92119138 4033277 complement(4048324..4049361) 1 NC_007964.1 extracellular solute-binding protein 4049361 4033277 Nham_3679 Nitrobacter hamburgensis X14 extracellular solute-binding protein YP_578867.1 4048324 R 323097 CDS YP_578868.1 92119139 4033278 complement(4049418..4050017) 1 NC_007964.1 ErfK/YbiS/YcfS/YnhG 4050017 4033278 Nham_3680 Nitrobacter hamburgensis X14 ErfK/YbiS/YcfS/YnhG YP_578868.1 4049418 R 323097 CDS YP_578869.1 92119140 4033279 complement(4050296..4050919) 1 NC_007964.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 4050919 4033279 Nham_3681 Nitrobacter hamburgensis X14 RNA polymerase sigma factor YP_578869.1 4050296 R 323097 CDS YP_578870.1 92119141 4033280 4051180..4052211 1 NC_007964.1 transposase IS116/IS110/IS902 4052211 4033280 Nham_3682 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_578870.1 4051180 D 323097 CDS YP_578871.1 92119142 4033281 complement(4052666..4053406) 1 NC_007964.1 two component transcriptional regulator 4053406 4033281 Nham_3683 Nitrobacter hamburgensis X14 two component transcriptional regulator YP_578871.1 4052666 R 323097 CDS YP_578872.1 92119143 4030670 complement(4053408..4055150) 1 NC_007964.1 response regulator receiver sensor signal transduction histidine kinase 4055150 4030670 Nham_3684 Nitrobacter hamburgensis X14 response regulator receiver sensor signal transduction histidine kinase YP_578872.1 4053408 R 323097 CDS YP_578873.1 92119144 4030671 complement(4055150..4057276) 1 NC_007964.1 histidine kinase 4057276 4030671 Nham_3685 Nitrobacter hamburgensis X14 histidine kinase YP_578873.1 4055150 R 323097 CDS YP_578874.1 92119145 4030672 4057570..4058952 1 NC_007964.1 extracellular solute-binding protein 4058952 4030672 Nham_3686 Nitrobacter hamburgensis X14 extracellular solute-binding protein YP_578874.1 4057570 D 323097 CDS YP_578875.1 92119146 4030673 complement(4059166..4059777) 1 NC_007964.1 polyhydroxyalkanoate synthesis repressor PhaR 4059777 4030673 Nham_3687 Nitrobacter hamburgensis X14 polyhydroxyalkanoate synthesis repressor PhaR YP_578875.1 4059166 R 323097 CDS YP_578876.1 92119147 4030675 4061543..4062268 1 NC_007964.1 acetoacetyl-CoA reductase 4062268 4030675 Nham_3689 Nitrobacter hamburgensis X14 acetoacetyl-CoA reductase YP_578876.1 4061543 D 323097 CDS YP_578877.1 92119148 4030676 4062495..4063361 1 NC_007964.1 hypothetical protein 4063361 4030676 Nham_3690 Nitrobacter hamburgensis X14 hypothetical protein YP_578877.1 4062495 D 323097 CDS YP_578878.1 92119149 4030677 complement(4063498..4064862) 1 NC_007964.1 major facilitator transporter 4064862 4030677 Nham_3691 Nitrobacter hamburgensis X14 major facilitator transporter YP_578878.1 4063498 R 323097 CDS YP_578879.1 92119150 4030679 4066289..4066816 1 NC_007964.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 4066816 def 4030679 def Nitrobacter hamburgensis X14 peptide deformylase YP_578879.1 4066289 D 323097 CDS YP_578880.1 92119151 4030680 4066841..4067773 1 NC_007964.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 4067773 fmt 4030680 fmt Nitrobacter hamburgensis X14 methionyl-tRNA formyltransferase YP_578880.1 4066841 D 323097 CDS YP_578881.1 92119152 4030681 4067893..4068630 1 NC_007964.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 4068630 truA 4030681 truA Nitrobacter hamburgensis X14 tRNA pseudouridine synthase A YP_578881.1 4067893 D 323097 CDS YP_578882.1 92119153 4030682 complement(4068804..4069364) 1 NC_007964.1 5'-methylthioadenosine nucleosidase 4069364 4030682 Nham_3696 Nitrobacter hamburgensis X14 5'-methylthioadenosine nucleosidase YP_578882.1 4068804 R 323097 CDS YP_578883.1 92119154 4030683 complement(4069361..4070596) 1 NC_007964.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 4070596 4030683 Nham_3697 Nitrobacter hamburgensis X14 succinyl-diaminopimelate desuccinylase YP_578883.1 4069361 R 323097 CDS YP_578884.1 92119155 4030684 complement(4070672..4071517) 1 NC_007964.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 4071517 dapD 4030684 dapD Nitrobacter hamburgensis X14 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_578884.1 4070672 R 323097 CDS YP_578885.1 92119156 4030685 complement(4071591..4072304) 1 NC_007964.1 pyrimidine 5-nucleotidase 4072304 4030685 Nham_3699 Nitrobacter hamburgensis X14 pyrimidine 5-nucleotidase YP_578885.1 4071591 R 323097 CDS YP_578886.1 92119157 4030686 complement(4072301..4073197) 1 NC_007964.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 4073197 4030686 Nham_3700 Nitrobacter hamburgensis X14 acetylglutamate kinase YP_578886.1 4072301 R 323097 CDS YP_578887.1 92119158 4030687 complement(4073287..4073673) 1 NC_007964.1 hypothetical protein 4073673 4030687 Nham_3701 Nitrobacter hamburgensis X14 hypothetical protein YP_578887.1 4073287 R 323097 CDS YP_578888.1 92119159 4030688 complement(4073670..4074323) 1 NC_007964.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 4074323 engB 4030688 engB Nitrobacter hamburgensis X14 ribosome biogenesis GTP-binding protein YsxC YP_578888.1 4073670 R 323097 CDS YP_578889.1 92119160 4030572 complement(4074468..4076297) 1 NC_007964.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 4076297 4030572 Nham_3703 Nitrobacter hamburgensis X14 inner membrane protein translocase component YidC YP_578889.1 4074468 R 323097 CDS YP_578890.1 92119161 4030573 complement(4076367..4076702) 1 NC_007964.1 ribonuclease P protein component 4076702 4030573 Nham_3704 Nitrobacter hamburgensis X14 ribonuclease P protein component YP_578890.1 4076367 R 323097 CDS YP_578891.1 92119162 4030574 complement(4076726..4076860) 1 NC_007964.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 4076860 rpmH 4030574 rpmH Nitrobacter hamburgensis X14 50S ribosomal protein L34 YP_578891.1 4076726 R 323097 CDS YP_578892.1 92119163 4030575 4077183..4078661 1 NC_007964.1 histidine kinase 4078661 4030575 Nham_3706 Nitrobacter hamburgensis X14 histidine kinase YP_578892.1 4077183 D 323097 CDS YP_578893.1 92119164 4030577 complement(4079521..4083354) 1 NC_007964.1 ATPase 4083354 4030577 Nham_3707 Nitrobacter hamburgensis X14 ATPase YP_578893.1 4079521 R 323097 CDS YP_578894.1 92119165 4030578 complement(4083391..4084278) 1 NC_007964.1 helicase-like protein 4084278 4030578 Nham_3708 Nitrobacter hamburgensis X14 helicase-like protein YP_578894.1 4083391 R 323097 CDS YP_578895.1 92119166 4030579 complement(4084170..4088090) 1 NC_007964.1 hypothetical protein 4088090 4030579 Nham_3709 Nitrobacter hamburgensis X14 hypothetical protein YP_578895.1 4084170 R 323097 CDS YP_578896.1 92119167 4030580 complement(4088926..4089204) 1 NC_007964.1 hypothetical protein 4089204 4030580 Nham_3710 Nitrobacter hamburgensis X14 hypothetical protein YP_578896.1 4088926 R 323097 CDS YP_578897.1 92119168 4030581 4089245..4090258 1 NC_007964.1 glycoside hydrolase family protein 4090258 4030581 Nham_3711 Nitrobacter hamburgensis X14 glycoside hydrolase family protein YP_578897.1 4089245 D 323097 CDS YP_578898.1 92119169 4030582 4090267..4091352 1 NC_007964.1 peptidase S1 and S6, chymotrypsin/Hap 4091352 4030582 Nham_3712 Nitrobacter hamburgensis X14 peptidase S1 and S6, chymotrypsin/Hap YP_578898.1 4090267 D 323097 CDS YP_578899.1 92119170 4030583 complement(4091438..4092226) 1 NC_007964.1 hypothetical protein 4092226 4030583 Nham_3713 Nitrobacter hamburgensis X14 hypothetical protein YP_578899.1 4091438 R 323097 CDS YP_578900.1 92119171 4030584 4092467..4093966 1 NC_007964.1 integrase catalytic subunit 4093966 4030584 Nham_3714 Nitrobacter hamburgensis X14 integrase catalytic subunit YP_578900.1 4092467 D 323097 CDS YP_578901.1 92119172 4030585 4093966..4094829 1 NC_007964.1 IstB-like ATP-binding protein 4094829 4030585 Nham_3715 Nitrobacter hamburgensis X14 IstB-like ATP-binding protein YP_578901.1 4093966 D 323097 CDS YP_578902.1 92119173 4030586 complement(4094809..4096392) 1 NC_007964.1 TonB-dependent receptor, plug 4096392 4030586 Nham_3716 Nitrobacter hamburgensis X14 TonB-dependent receptor, plug YP_578902.1 4094809 R 323097 CDS YP_578903.1 92119174 4030587 complement(4096484..4096855) 1 NC_007964.1 hypothetical protein 4096855 4030587 Nham_3717 Nitrobacter hamburgensis X14 hypothetical protein YP_578903.1 4096484 R 323097 CDS YP_578904.1 92119175 4030589 4097687..4099948 1 NC_007964.1 TonB-dependent siderophore receptor 4099948 4030589 Nham_3719 Nitrobacter hamburgensis X14 TonB-dependent siderophore receptor YP_578904.1 4097687 D 323097 CDS YP_578905.1 92119176 4030590 4099951..4100265 1 NC_007964.1 hypothetical protein 4100265 4030590 Nham_3720 Nitrobacter hamburgensis X14 hypothetical protein YP_578905.1 4099951 D 323097 CDS YP_578906.1 92119177 4030055 4100267..4101826 1 NC_007964.1 PepSY-associated TM helix family protein 4101826 4030055 Nham_3721 Nitrobacter hamburgensis X14 PepSY-associated TM helix family protein YP_578906.1 4100267 D 323097 CDS YP_578907.1 92119178 4030056 4101819..4102139 1 NC_007964.1 hypothetical protein 4102139 4030056 Nham_3722 Nitrobacter hamburgensis X14 hypothetical protein YP_578907.1 4101819 D 323097 CDS YP_578908.1 92119179 4030057 4102230..4103765 1 NC_007964.1 hypothetical protein 4103765 4030057 Nham_3723 Nitrobacter hamburgensis X14 hypothetical protein YP_578908.1 4102230 D 323097 CDS YP_578909.1 92119180 4030059 4104407..4104883 1 NC_007964.1 PA-phosphatase-like phosphoesterase 4104883 4030059 Nham_3725 Nitrobacter hamburgensis X14 PA-phosphatase-like phosphoesterase YP_578909.1 4104407 D 323097 CDS YP_578910.1 92119181 4030060 complement(4104920..4105342) 1 NC_007964.1 MerR family transcriptional regulator 4105342 4030060 Nham_3726 Nitrobacter hamburgensis X14 MerR family transcriptional regulator YP_578910.1 4104920 R 323097 CDS YP_578911.1 92119182 4030061 4105411..4107546 1 NC_007964.1 heavy metal translocating P-type ATPase 4107546 4030061 Nham_3727 Nitrobacter hamburgensis X14 heavy metal translocating P-type ATPase YP_578911.1 4105411 D 323097 CDS YP_578912.1 92119183 4030062 complement(4107929..4108828) 1 NC_007964.1 periplasmic binding protein 4108828 4030062 Nham_3728 Nitrobacter hamburgensis X14 periplasmic binding protein YP_578912.1 4107929 R 323097 CDS YP_578913.1 92119184 4030063 complement(4108834..4109616) 1 NC_007964.1 ABC transporter 4109616 4030063 Nham_3729 Nitrobacter hamburgensis X14 ABC transporter YP_578913.1 4108834 R 323097 CDS YP_578914.1 92119185 4030064 complement(4109613..4110638) 1 NC_007964.1 transport system permease 4110638 4030064 Nham_3730 Nitrobacter hamburgensis X14 transport system permease YP_578914.1 4109613 R 323097 CDS YP_578915.1 92119186 4030066 complement(4111031..4111315) 1 NC_007964.1 hypothetical protein 4111315 4030066 Nham_3731 Nitrobacter hamburgensis X14 hypothetical protein YP_578915.1 4111031 R 323097 CDS YP_578916.1 92119187 4030067 complement(4111581..4112066) 1 NC_007964.1 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen 4112066 4030067 Nham_3732 Nitrobacter hamburgensis X14 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_578916.1 4111581 R 323097 CDS YP_578917.1 92119188 4030068 complement(4112265..4112843) 1 NC_007964.1 hypothetical protein 4112843 4030068 Nham_3733 Nitrobacter hamburgensis X14 hypothetical protein YP_578917.1 4112265 R 323097 CDS YP_578918.1 92119189 4030069 complement(4113108..4114790) 1 NC_007964.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 4114790 4030069 Nham_3734 Nitrobacter hamburgensis X14 long-chain-fatty-acid--CoA ligase YP_578918.1 4113108 R 323097 CDS YP_578919.1 92119190 4030070 complement(4114954..4116321) 1 NC_007964.1 Serine-type D-Ala-D-Ala carboxypeptidase 4116321 4030070 Nham_3735 Nitrobacter hamburgensis X14 Serine-type D-Ala-D-Ala carboxypeptidase YP_578919.1 4114954 R 323097 CDS YP_578920.1 92119191 4030071 complement(4116502..4118283) 1 NC_007964.1 responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease component; Cgt; ChvA; NdvA; cyclic beta-1,2-glucan ABc transporter 4118283 4030071 Nham_3736 Nitrobacter hamburgensis X14 cyclic beta-1,2-glucan ABc transporter YP_578920.1 4116502 R 323097 CDS YP_578921.1 92119192 4030072 complement(4118358..4119419) 1 NC_007964.1 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components 4119419 4030072 Nham_3737 Nitrobacter hamburgensis X14 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components YP_578921.1 4118358 R 323097 CDS YP_578922.1 92119193 4032475 4119510..4120037 1 NC_007964.1 hypothetical protein 4120037 4032475 Nham_3738 Nitrobacter hamburgensis X14 hypothetical protein YP_578922.1 4119510 D 323097 CDS YP_578923.1 92119194 4032476 4120316..4120912 1 NC_007964.1 hypothetical protein 4120912 4032476 Nham_3739 Nitrobacter hamburgensis X14 hypothetical protein YP_578923.1 4120316 D 323097 CDS YP_578924.1 92119195 4032477 4121225..4121413 1 NC_007964.1 hypothetical protein 4121413 4032477 Nham_3740 Nitrobacter hamburgensis X14 hypothetical protein YP_578924.1 4121225 D 323097 CDS YP_578925.1 92119196 4032478 4121542..4121829 1 NC_007964.1 hypothetical protein 4121829 4032478 Nham_3741 Nitrobacter hamburgensis X14 hypothetical protein YP_578925.1 4121542 D 323097 CDS YP_578926.1 92119197 4032479 4122024..4122689 1 NC_007964.1 hypothetical protein 4122689 4032479 Nham_3742 Nitrobacter hamburgensis X14 hypothetical protein YP_578926.1 4122024 D 323097 CDS YP_578927.1 92119198 4032480 complement(4122987..4123442) 1 NC_007964.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 4123442 rnhA 4032480 rnhA Nitrobacter hamburgensis X14 ribonuclease H YP_578927.1 4122987 R 323097 CDS YP_578928.1 92119199 4032481 complement(4123439..4124419) 1 NC_007964.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 4124419 4032481 Nham_3744 Nitrobacter hamburgensis X14 homoserine kinase YP_578928.1 4123439 R 323097 CDS YP_578929.1 92119200 4032482 complement(4124726..4125700) 1 NC_007964.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 4125700 ispH 4032482 ispH Nitrobacter hamburgensis X14 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_578929.1 4124726 R 323097 CDS YP_578930.1 92119201 4032483 4125936..4126640 1 NC_007964.1 hypothetical protein 4126640 4032483 Nham_3746 Nitrobacter hamburgensis X14 hypothetical protein YP_578930.1 4125936 D 323097 CDS YP_578931.1 92119202 4032484 complement(4126890..4127150) 1 NC_007964.1 hypothetical protein 4127150 4032484 Nham_3747 Nitrobacter hamburgensis X14 hypothetical protein YP_578931.1 4126890 R 323097 CDS YP_578932.1 92119203 4032485 complement(4127410..4129335) 1 NC_007964.1 AMP-dependent synthetase and ligase 4129335 4032485 Nham_3748 Nitrobacter hamburgensis X14 AMP-dependent synthetase and ligase YP_578932.1 4127410 R 323097 CDS YP_578933.1 92119204 4032486 complement(4129612..4130526) 1 NC_007964.1 ATPase AAA 4130526 4032486 Nham_3749 Nitrobacter hamburgensis X14 ATPase AAA YP_578933.1 4129612 R 323097 CDS YP_578934.1 92119205 4032487 complement(4130679..4131104) 1 NC_007964.1 ribulose-bisphosphate carboxylase 4131104 4032487 Nham_3750 Nitrobacter hamburgensis X14 ribulose-bisphosphate carboxylase YP_578934.1 4130679 R 323097 CDS YP_578935.1 92119206 4032488 complement(4131118..4132584) 1 NC_007964.1 type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase 4132584 rbcL 4032488 rbcL Nitrobacter hamburgensis X14 ribulose bisophosphate carboxylase YP_578935.1 4131118 R 323097 CDS YP_578936.1 92119207 4032489 complement(4132646..4133731) 1 NC_007964.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 4133731 4032489 Nham_3752 Nitrobacter hamburgensis X14 fructose-1,6-bisphosphate aldolase YP_578936.1 4132646 R 323097 CDS YP_578937.1 92119208 4032490 complement(4133853..4134725) 1 NC_007964.1 phosphoribulokinase 4134725 4032490 Nham_3753 Nitrobacter hamburgensis X14 phosphoribulokinase YP_578937.1 4133853 R 323097 CDS YP_578938.1 92119209 4032491 complement(4134746..4135783) 1 NC_007964.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 4135783 4032491 Nham_3754 Nitrobacter hamburgensis X14 fructose-1,6-bisphosphatase YP_578938.1 4134746 R 323097 CDS YP_578939.1 92119210 4032492 4135915..4136880 1 NC_007964.1 LysR family transcriptional regulator 4136880 4032492 Nham_3755 Nitrobacter hamburgensis X14 LysR family transcriptional regulator YP_578939.1 4135915 D 323097 CDS YP_578940.1 92119211 4031718 4137370..4137948 1 NC_007964.1 hypothetical protein 4137948 4031718 Nham_3756 Nitrobacter hamburgensis X14 hypothetical protein YP_578940.1 4137370 D 323097 CDS YP_578941.1 92119212 4031719 4137949..4138818 1 NC_007964.1 hypothetical protein 4138818 4031719 Nham_3757 Nitrobacter hamburgensis X14 hypothetical protein YP_578941.1 4137949 D 323097 CDS YP_578942.1 92119213 4031720 4138799..4139077 1 NC_007964.1 hypothetical protein 4139077 4031720 Nham_3758 Nitrobacter hamburgensis X14 hypothetical protein YP_578942.1 4138799 D 323097 CDS YP_578943.1 92119214 4031721 4139084..4140136 1 NC_007964.1 hypothetical protein 4140136 4031721 Nham_3759 Nitrobacter hamburgensis X14 hypothetical protein YP_578943.1 4139084 D 323097 CDS YP_578944.1 92119215 4031722 complement(4140332..4140553) 1 NC_007964.1 hypothetical protein 4140553 4031722 Nham_3760 Nitrobacter hamburgensis X14 hypothetical protein YP_578944.1 4140332 R 323097 CDS YP_578945.1 92119216 4031724 complement(4141778..4141990) 1 NC_007964.1 hypothetical protein 4141990 4031724 Nham_3762 Nitrobacter hamburgensis X14 hypothetical protein YP_578945.1 4141778 R 323097 CDS YP_578946.1 92119217 4031725 complement(4142067..4142333) 1 NC_007964.1 hypothetical protein 4142333 4031725 Nham_3763 Nitrobacter hamburgensis X14 hypothetical protein YP_578946.1 4142067 R 323097 CDS YP_578947.1 92119218 4031726 complement(4143054..4143878) 1 NC_007964.1 hypothetical protein 4143878 4031726 Nham_3764 Nitrobacter hamburgensis X14 hypothetical protein YP_578947.1 4143054 R 323097 CDS YP_578948.1 92119219 4031727 complement(4143950..4147213) 1 NC_007964.1 DNA polymerase III subunit alpha 4147213 4031727 Nham_3765 Nitrobacter hamburgensis X14 DNA polymerase III subunit alpha YP_578948.1 4143950 R 323097 CDS YP_578949.1 92119220 4031728 complement(4147210..4148670) 1 NC_007964.1 hypothetical protein 4148670 4031728 Nham_3766 Nitrobacter hamburgensis X14 hypothetical protein YP_578949.1 4147210 R 323097 CDS YP_578950.1 92119221 4031729 complement(4148651..4149394) 1 NC_007964.1 hypothetical protein 4149394 4031729 Nham_3767 Nitrobacter hamburgensis X14 hypothetical protein YP_578950.1 4148651 R 323097 CDS YP_578951.1 92119222 4031730 4149580..4151649 1 NC_007964.1 UvrD/REP helicase 4151649 4031730 Nham_3768 Nitrobacter hamburgensis X14 UvrD/REP helicase YP_578951.1 4149580 D 323097 CDS YP_578952.1 92119223 4031731 4151740..4152768 1 NC_007964.1 transposase IS116/IS110/IS902 4152768 4031731 Nham_3769 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_578952.1 4151740 D 323097 CDS YP_578953.1 92119224 4031732 4153050..4153505 1 NC_007964.1 hypothetical protein 4153505 4031732 Nham_3770 Nitrobacter hamburgensis X14 hypothetical protein YP_578953.1 4153050 D 323097 CDS YP_578954.1 92119225 4031735 complement(4154380..4155795) 1 NC_007964.1 amino acid/peptide transporter 4155795 4031735 Nham_3773 Nitrobacter hamburgensis X14 amino acid/peptide transporter YP_578954.1 4154380 R 323097 CDS YP_578955.1 92119226 4029692 complement(4156193..4156546) 1 NC_007964.1 hypothetical protein 4156546 4029692 Nham_3775 Nitrobacter hamburgensis X14 hypothetical protein YP_578955.1 4156193 R 323097 CDS YP_578956.1 92119227 4029693 4156558..4156893 1 NC_007964.1 hypothetical protein 4156893 4029693 Nham_3776 Nitrobacter hamburgensis X14 hypothetical protein YP_578956.1 4156558 D 323097 CDS YP_578957.1 92119228 4029694 4156898..4157467 1 NC_007964.1 hypothetical protein 4157467 4029694 Nham_3777 Nitrobacter hamburgensis X14 hypothetical protein YP_578957.1 4156898 D 323097 CDS YP_578958.1 92119229 4029695 4157811..4158236 1 NC_007964.1 hypothetical protein 4158236 4029695 Nham_3778 Nitrobacter hamburgensis X14 hypothetical protein YP_578958.1 4157811 D 323097 CDS YP_578959.1 92119230 4029696 4158233..4158997 1 NC_007964.1 metallophosphoesterase 4158997 4029696 Nham_3779 Nitrobacter hamburgensis X14 metallophosphoesterase YP_578959.1 4158233 D 323097 CDS YP_578960.1 92119231 4029697 4159071..4159448 1 NC_007964.1 hypothetical protein 4159448 4029697 Nham_3780 Nitrobacter hamburgensis X14 hypothetical protein YP_578960.1 4159071 D 323097 CDS YP_578961.1 92119232 4029698 4159445..4161061 1 NC_007964.1 ATPase 4161061 4029698 Nham_3781 Nitrobacter hamburgensis X14 ATPase YP_578961.1 4159445 D 323097 CDS YP_578962.1 92119233 4029699 4161219..4162502 1 NC_007964.1 hypothetical protein 4162502 4029699 Nham_3782 Nitrobacter hamburgensis X14 hypothetical protein YP_578962.1 4161219 D 323097 CDS YP_578963.1 92119234 4029700 4163252..4166092 1 NC_007964.1 histidine kinase 4166092 4029700 Nham_3783 Nitrobacter hamburgensis X14 histidine kinase YP_578963.1 4163252 D 323097 CDS YP_578964.1 92119235 4029701 4166064..4167206 1 NC_007964.1 response regulator receiver domain-containing protein 4167206 4029701 Nham_3784 Nitrobacter hamburgensis X14 response regulator receiver domain-containing protein YP_578964.1 4166064 D 323097 CDS YP_578965.1 92119236 4029702 4167190..4167924 1 NC_007964.1 hypothetical protein 4167924 4029702 Nham_3785 Nitrobacter hamburgensis X14 hypothetical protein YP_578965.1 4167190 D 323097 CDS YP_578966.1 92119237 4029705 4169169..4169966 1 NC_007964.1 transposase, IS4 4169966 4029705 Nham_3788 Nitrobacter hamburgensis X14 transposase, IS4 YP_578966.1 4169169 D 323097 CDS YP_578967.1 92119238 4029706 complement(4169986..4170306) 1 NC_007964.1 hypothetical protein 4170306 4029706 Nham_3789 Nitrobacter hamburgensis X14 hypothetical protein YP_578967.1 4169986 R 323097 CDS YP_578968.1 92119239 4029707 4170391..4170828 1 NC_007964.1 hypothetical protein 4170828 4029707 Nham_3790 Nitrobacter hamburgensis X14 hypothetical protein YP_578968.1 4170391 D 323097 CDS YP_578969.1 92119240 4029708 4170828..4171289 1 NC_007964.1 hypothetical protein 4171289 4029708 Nham_3791 Nitrobacter hamburgensis X14 hypothetical protein YP_578969.1 4170828 D 323097 CDS YP_578970.1 92119241 4029710 complement(4172075..4172617) 1 NC_007964.1 hypothetical protein 4172617 4029710 Nham_3793 Nitrobacter hamburgensis X14 hypothetical protein YP_578970.1 4172075 R 323097 CDS YP_578971.1 92119242 4029711 4173128..4173490 1 NC_007964.1 PRC-barrel protein 4173490 4029711 Nham_3794 Nitrobacter hamburgensis X14 PRC-barrel protein YP_578971.1 4173128 D 323097 CDS YP_578972.1 92119243 4033339 complement(4174100..4174603) 1 NC_007964.1 hypothetical protein 4174603 4033339 Nham_3795 Nitrobacter hamburgensis X14 hypothetical protein YP_578972.1 4174100 R 323097 CDS YP_578973.1 92119244 4033344 4178080..4178391 1 NC_007964.1 hypothetical protein 4178391 4033344 Nham_3800 Nitrobacter hamburgensis X14 hypothetical protein YP_578973.1 4178080 D 323097 CDS YP_578974.1 92119245 4033346 4179518..4181242 1 NC_007964.1 signal transduction histidine kinase 4181242 4033346 Nham_3802 Nitrobacter hamburgensis X14 signal transduction histidine kinase YP_578974.1 4179518 D 323097 CDS YP_578975.1 92119246 4033349 4182488..4182904 1 NC_007964.1 hypothetical protein 4182904 4033349 Nham_3805 Nitrobacter hamburgensis X14 hypothetical protein YP_578975.1 4182488 D 323097 CDS YP_578976.1 92119247 4033350 4184257..4184769 1 NC_007964.1 transposase IS3/IS911 4184769 4033350 Nham_3806 Nitrobacter hamburgensis X14 transposase IS3/IS911 YP_578976.1 4184257 D 323097 CDS YP_578977.1 92119248 4033351 4184750..4185103 1 NC_007964.1 IS66 Orf2 like 4185103 4033351 Nham_3807 Nitrobacter hamburgensis X14 IS66 Orf2 like YP_578977.1 4184750 D 323097 CDS YP_578978.1 92119249 4033352 4185158..4186732 1 NC_007964.1 transposase IS66 4186732 4033352 Nham_3808 Nitrobacter hamburgensis X14 transposase IS66 YP_578978.1 4185158 D 323097 CDS YP_578979.1 92119250 4033353 complement(4187295..4188140) 1 NC_007964.1 hypothetical protein 4188140 4033353 Nham_3809 Nitrobacter hamburgensis X14 hypothetical protein YP_578979.1 4187295 R 323097 CDS YP_578980.1 92119251 4033354 4188442..4188774 1 NC_007964.1 hypothetical protein 4188774 4033354 Nham_3810 Nitrobacter hamburgensis X14 hypothetical protein YP_578980.1 4188442 D 323097 CDS YP_578981.1 92119252 4033355 4188771..4189145 1 NC_007964.1 hypothetical protein 4189145 4033355 Nham_3811 Nitrobacter hamburgensis X14 hypothetical protein YP_578981.1 4188771 D 323097 CDS YP_578982.1 92119253 4033357 complement(4189900..4190340) 1 NC_007964.1 hypothetical protein 4190340 4033357 Nham_3813 Nitrobacter hamburgensis X14 hypothetical protein YP_578982.1 4189900 R 323097 CDS YP_578983.1 92119254 4030591 complement(4190557..4190907) 1 NC_007964.1 PRC-barrel protein 4190907 4030591 Nham_3814 Nitrobacter hamburgensis X14 PRC-barrel protein YP_578983.1 4190557 R 323097 CDS YP_578984.1 92119255 4030592 complement(4191161..4191343) 1 NC_007964.1 hypothetical protein 4191343 4030592 Nham_3815 Nitrobacter hamburgensis X14 hypothetical protein YP_578984.1 4191161 R 323097 CDS YP_578985.1 92119256 4030595 4195228..4196229 1 NC_007964.1 signal transduction histidine kinase 4196229 4030595 Nham_3818 Nitrobacter hamburgensis X14 signal transduction histidine kinase YP_578985.1 4195228 D 323097 CDS YP_578986.1 92119257 4030596 4196429..4196668 1 NC_007964.1 hypothetical protein 4196668 4030596 Nham_3819 Nitrobacter hamburgensis X14 hypothetical protein YP_578986.1 4196429 D 323097 CDS YP_578987.1 92119258 4030599 complement(4198985..4199302) 1 NC_007964.1 hypothetical protein 4199302 4030599 Nham_3822 Nitrobacter hamburgensis X14 hypothetical protein YP_578987.1 4198985 R 323097 CDS YP_578988.1 92119259 4030600 4199475..4199738 1 NC_007964.1 hypothetical protein 4199738 4030600 Nham_3823 Nitrobacter hamburgensis X14 hypothetical protein YP_578988.1 4199475 D 323097 CDS YP_578989.1 92119260 4030602 4200725..4201114 1 NC_007964.1 transposase IS3/IS911 4201114 4030602 Nham_3825 Nitrobacter hamburgensis X14 transposase IS3/IS911 YP_578989.1 4200725 D 323097 CDS YP_578990.1 92119261 4030603 4201111..4202091 1 NC_007964.1 integrase catalytic subunit 4202091 4030603 Nham_3826 Nitrobacter hamburgensis X14 integrase catalytic subunit YP_578990.1 4201111 D 323097 CDS YP_578991.1 92119262 4030604 complement(4202575..4203738) 1 NC_007964.1 hypothetical protein 4203738 4030604 Nham_3827 Nitrobacter hamburgensis X14 hypothetical protein YP_578991.1 4202575 R 323097 CDS YP_578992.1 92119263 4030605 4203949..4205763 1 NC_007964.1 hypothetical protein 4205763 4030605 Nham_3828 Nitrobacter hamburgensis X14 hypothetical protein YP_578992.1 4203949 D 323097 CDS YP_578993.1 92119264 4030606 4205760..4207028 1 NC_007964.1 hypothetical protein 4207028 4030606 Nham_3829 Nitrobacter hamburgensis X14 hypothetical protein YP_578993.1 4205760 D 323097 CDS YP_578994.1 92119265 4030607 4207225..4208307 1 NC_007964.1 hypothetical protein 4208307 4030607 Nham_3830 Nitrobacter hamburgensis X14 hypothetical protein YP_578994.1 4207225 D 323097 CDS YP_578995.1 92119266 4030608 complement(4208310..4208813) 1 NC_007964.1 hypothetical protein 4208813 4030608 Nham_3831 Nitrobacter hamburgensis X14 hypothetical protein YP_578995.1 4208310 R 323097 CDS YP_578996.1 92119267 4030610 4209642..4210931 1 NC_007964.1 hypothetical protein 4210931 4030610 Nham_3833 Nitrobacter hamburgensis X14 hypothetical protein YP_578996.1 4209642 D 323097 CDS YP_578997.1 92119268 4030169 complement(4210970..4211377) 1 NC_007964.1 hypothetical protein 4211377 4030169 Nham_3834 Nitrobacter hamburgensis X14 hypothetical protein YP_578997.1 4210970 R 323097 CDS YP_578998.1 92119269 4030170 4211704..4212801 1 NC_007964.1 replication protein 4212801 4030170 Nham_3835 Nitrobacter hamburgensis X14 replication protein YP_578998.1 4211704 D 323097 CDS YP_578999.1 92119270 4030171 4212874..4213215 1 NC_007964.1 hypothetical protein 4213215 4030171 Nham_3836 Nitrobacter hamburgensis X14 hypothetical protein YP_578999.1 4212874 D 323097 CDS YP_579000.1 92119271 4030172 4213289..4213786 1 NC_007964.1 hypothetical protein 4213786 4030172 Nham_3837 Nitrobacter hamburgensis X14 hypothetical protein YP_579000.1 4213289 D 323097 CDS YP_579001.1 92119272 4030173 4213795..4215705 1 NC_007964.1 cell division protein FtsK 4215705 4030173 Nham_3838 Nitrobacter hamburgensis X14 cell division protein FtsK YP_579001.1 4213795 D 323097 CDS YP_579002.1 92119273 4030174 complement(4215785..4216258) 1 NC_007964.1 hypothetical protein 4216258 4030174 Nham_3839 Nitrobacter hamburgensis X14 hypothetical protein YP_579002.1 4215785 R 323097 CDS YP_579003.1 92119274 4030175 4216668..4217009 1 NC_007964.1 hypothetical protein 4217009 4030175 Nham_3840 Nitrobacter hamburgensis X14 hypothetical protein YP_579003.1 4216668 D 323097 CDS YP_579004.1 92119275 4030176 complement(4216984..4219671) 1 NC_007964.1 hypothetical protein 4219671 4030176 Nham_3841 Nitrobacter hamburgensis X14 hypothetical protein YP_579004.1 4216984 R 323097 CDS YP_579005.1 92119276 4030177 4219811..4220182 1 NC_007964.1 hypothetical protein 4220182 4030177 Nham_3842 Nitrobacter hamburgensis X14 hypothetical protein YP_579005.1 4219811 D 323097 CDS YP_579006.1 92119277 4030178 4220182..4220520 1 NC_007964.1 XRE family transcriptional regulator 4220520 4030178 Nham_3843 Nitrobacter hamburgensis X14 XRE family transcriptional regulator YP_579006.1 4220182 D 323097 CDS YP_579007.1 92119278 4030179 4220543..4221856 1 NC_007964.1 hypothetical protein 4221856 4030179 Nham_3844 Nitrobacter hamburgensis X14 hypothetical protein YP_579007.1 4220543 D 323097 CDS YP_579008.1 92119279 4030180 4222057..4224993 1 NC_007964.1 DNA modification methyltransferase-like protein 4224993 4030180 Nham_3845 Nitrobacter hamburgensis X14 DNA modification methyltransferase-like protein YP_579008.1 4222057 D 323097 CDS YP_579009.1 92119280 4030181 complement(4225031..4225255) 1 NC_007964.1 hypothetical protein 4225255 4030181 Nham_3846 Nitrobacter hamburgensis X14 hypothetical protein YP_579009.1 4225031 R 323097 CDS YP_579010.1 92119281 4030182 complement(4225252..4225827) 1 NC_007964.1 resolvase-like protein 4225827 4030182 Nham_3847 Nitrobacter hamburgensis X14 resolvase-like protein YP_579010.1 4225252 R 323097 CDS YP_579011.1 92119282 4030183 4226947..4227210 1 NC_007964.1 hypothetical protein 4227210 4030183 Nham_3848 Nitrobacter hamburgensis X14 hypothetical protein YP_579011.1 4226947 D 323097 CDS YP_579012.1 92119283 4030184 complement(4227449..4228480) 1 NC_007964.1 hypothetical protein 4228480 4030184 Nham_3849 Nitrobacter hamburgensis X14 hypothetical protein YP_579012.1 4227449 R 323097 CDS YP_579013.1 92119284 4030185 complement(4228762..4231107) 1 NC_007964.1 complement C1q protein 4231107 4030185 Nham_3850 Nitrobacter hamburgensis X14 complement C1q protein YP_579013.1 4228762 R 323097 CDS YP_579014.1 92119285 4030186 complement(4231107..4231676) 1 NC_007964.1 hypothetical protein 4231676 4030186 Nham_3851 Nitrobacter hamburgensis X14 hypothetical protein YP_579014.1 4231107 R 323097 CDS YP_579015.1 92119286 4030187 complement(4231992..4232939) 1 NC_007964.1 ATP dependent DNA ligase 4232939 4030187 Nham_3852 Nitrobacter hamburgensis X14 ATP dependent DNA ligase YP_579015.1 4231992 R 323097 CDS YP_579016.1 92119287 4030092 complement(4233281..4233640) 1 NC_007964.1 PRC-barrel protein 4233640 4030092 Nham_3853 Nitrobacter hamburgensis X14 PRC-barrel protein YP_579016.1 4233281 R 323097 CDS YP_579017.1 92119288 4030093 complement(4233848..4234147) 1 NC_007964.1 hypothetical protein 4234147 4030093 Nham_3854 Nitrobacter hamburgensis X14 hypothetical protein YP_579017.1 4233848 R 323097 CDS YP_579018.1 92119289 4030094 complement(4234697..4235233) 1 NC_007964.1 hypothetical protein 4235233 4030094 Nham_3855 Nitrobacter hamburgensis X14 hypothetical protein YP_579018.1 4234697 R 323097 CDS YP_579019.1 92119290 4030095 complement(4235340..4236725) 1 NC_007964.1 hypothetical protein 4236725 4030095 Nham_3856 Nitrobacter hamburgensis X14 hypothetical protein YP_579019.1 4235340 R 323097 CDS YP_579020.1 92119291 4030096 complement(4236725..4237057) 1 NC_007964.1 hypothetical protein 4237057 4030096 Nham_3857 Nitrobacter hamburgensis X14 hypothetical protein YP_579020.1 4236725 R 323097 CDS YP_579021.1 92119292 4030097 complement(4237338..4238372) 1 NC_007964.1 hypothetical protein 4238372 4030097 Nham_3858 Nitrobacter hamburgensis X14 hypothetical protein YP_579021.1 4237338 R 323097 CDS YP_579022.1 92119293 4030098 4239577..4240494 1 NC_007964.1 integrase 4240494 4030098 Nham_3859 Nitrobacter hamburgensis X14 integrase YP_579022.1 4239577 D 323097 CDS YP_579023.1 92119294 4030099 4240463..4240798 1 NC_007964.1 hypothetical protein 4240798 4030099 Nham_3860 Nitrobacter hamburgensis X14 hypothetical protein YP_579023.1 4240463 D 323097 CDS YP_579024.1 92119295 4030100 4240978..4241622 1 NC_007964.1 cobyrinic acid a,c-diamide synthase 4241622 4030100 Nham_3861 Nitrobacter hamburgensis X14 cobyrinic acid a,c-diamide synthase YP_579024.1 4240978 D 323097 CDS YP_579025.1 92119296 4030101 4241619..4241885 1 NC_007964.1 hypothetical protein 4241885 4030101 Nham_3862 Nitrobacter hamburgensis X14 hypothetical protein YP_579025.1 4241619 D 323097 CDS YP_579026.1 92119297 4030102 4241915..4243096 1 NC_007964.1 hypothetical protein 4243096 4030102 Nham_3863 Nitrobacter hamburgensis X14 hypothetical protein YP_579026.1 4241915 D 323097 CDS YP_579027.1 92119298 4030103 4244072..4245685 1 NC_007964.1 recombinase 4245685 4030103 Nham_3864 Nitrobacter hamburgensis X14 recombinase YP_579027.1 4244072 D 323097 CDS YP_579028.1 92119299 4030106 complement(4248504..4249718) 1 NC_007964.1 esterase 4249718 4030106 Nham_3867 Nitrobacter hamburgensis X14 esterase YP_579028.1 4248504 R 323097 CDS YP_579029.1 92119300 4030107 complement(4249722..4250150) 1 NC_007964.1 CopG family transcriptional regulator 4250150 4030107 Nham_3868 Nitrobacter hamburgensis X14 CopG family transcriptional regulator YP_579029.1 4249722 R 323097 CDS YP_579030.1 92119301 4030109 complement(4251163..4251402) 1 NC_007964.1 hypothetical protein 4251402 4030109 Nham_3870 Nitrobacter hamburgensis X14 hypothetical protein YP_579030.1 4251163 R 323097 CDS YP_579031.1 92119302 4030110 complement(4251423..4252361) 1 NC_007964.1 hypothetical protein 4252361 4030110 Nham_3871 Nitrobacter hamburgensis X14 hypothetical protein YP_579031.1 4251423 R 323097 CDS YP_579032.1 92119303 4029485 4254180..4254356 1 NC_007964.1 hypothetical protein 4254356 4029485 Nham_3874 Nitrobacter hamburgensis X14 hypothetical protein YP_579032.1 4254180 D 323097 CDS YP_579033.1 92119304 4029486 4254476..4254754 1 NC_007964.1 hypothetical protein 4254754 4029486 Nham_3875 Nitrobacter hamburgensis X14 hypothetical protein YP_579033.1 4254476 D 323097 CDS YP_579034.1 92119305 4029487 4255093..4256094 1 NC_007964.1 hypothetical protein 4256094 4029487 Nham_3876 Nitrobacter hamburgensis X14 hypothetical protein YP_579034.1 4255093 D 323097 CDS YP_579035.1 92119306 4029488 4256091..4256627 1 NC_007964.1 hypothetical protein 4256627 4029488 Nham_3877 Nitrobacter hamburgensis X14 hypothetical protein YP_579035.1 4256091 D 323097 CDS YP_579036.1 92119307 4029489 4256624..4257019 1 NC_007964.1 hypothetical protein 4257019 4029489 Nham_3878 Nitrobacter hamburgensis X14 hypothetical protein YP_579036.1 4256624 D 323097 CDS YP_579037.1 92119308 4029490 4257016..4257723 1 NC_007964.1 hypothetical protein 4257723 4029490 Nham_3879 Nitrobacter hamburgensis X14 hypothetical protein YP_579037.1 4257016 D 323097 CDS YP_579038.1 92119309 4029491 4257817..4258278 1 NC_007964.1 hypothetical protein 4258278 4029491 Nham_3880 Nitrobacter hamburgensis X14 hypothetical protein YP_579038.1 4257817 D 323097 CDS YP_579039.1 92119310 4029492 4258305..4258565 1 NC_007964.1 transglycosylase-associated protein 4258565 4029492 Nham_3881 Nitrobacter hamburgensis X14 transglycosylase-associated protein YP_579039.1 4258305 D 323097 CDS YP_579040.1 92119311 4029493 4258846..4261194 1 NC_007964.1 GAF sensor protein 4261194 4029493 Nham_3882 Nitrobacter hamburgensis X14 GAF sensor protein YP_579040.1 4258846 D 323097 CDS YP_579041.1 92119312 4029497 complement(4263399..4264721) 1 NC_007964.1 RNA-directed DNA polymerase 4264721 4029497 Nham_3886 Nitrobacter hamburgensis X14 RNA-directed DNA polymerase YP_579041.1 4263399 R 323097 CDS YP_579042.1 92119313 4029498 complement(4265150..4265629) 1 NC_007964.1 transposase and inactivated derivatives-like 4265629 4029498 Nham_3887 Nitrobacter hamburgensis X14 transposase and inactivated derivatives-like YP_579042.1 4265150 R 323097 CDS YP_579043.1 92119314 4029500 4266988..4267629 1 NC_007964.1 ISMca7, transposase 4267629 4029500 Nham_3889 Nitrobacter hamburgensis X14 ISMca7, transposase YP_579043.1 4266988 D 323097 CDS YP_579044.1 92119315 4029501 complement(4267977..4268834) 1 NC_007964.1 hypothetical protein 4268834 4029501 Nham_3890 Nitrobacter hamburgensis X14 hypothetical protein YP_579044.1 4267977 R 323097 CDS YP_579045.1 92119316 4032649 4271406..4271648 1 NC_007964.1 hypothetical protein 4271648 4032649 Nham_3893 Nitrobacter hamburgensis X14 hypothetical protein YP_579045.1 4271406 D 323097 CDS YP_579046.1 92119317 4032650 complement(4271617..4272150) 1 NC_007964.1 cytochrome B561 4272150 4032650 Nham_3894 Nitrobacter hamburgensis X14 cytochrome B561 YP_579046.1 4271617 R 323097 CDS YP_579047.1 92119318 4032651 complement(4272397..4273491) 1 NC_007964.1 transposase 4273491 4032651 Nham_3895 Nitrobacter hamburgensis X14 transposase YP_579047.1 4272397 R 323097 CDS YP_579048.1 92119319 4032652 complement(4273784..4274167) 1 NC_007964.1 hypothetical protein 4274167 4032652 Nham_3896 Nitrobacter hamburgensis X14 hypothetical protein YP_579048.1 4273784 R 323097 CDS YP_579049.1 92119320 4032653 4274257..4274790 1 NC_007964.1 hypothetical protein 4274790 4032653 Nham_3897 Nitrobacter hamburgensis X14 hypothetical protein YP_579049.1 4274257 D 323097 CDS YP_579050.1 92119321 4032654 4274875..4275315 1 NC_007964.1 hypothetical protein 4275315 4032654 Nham_3898 Nitrobacter hamburgensis X14 hypothetical protein YP_579050.1 4274875 D 323097 CDS YP_579051.1 92119322 4032655 4276093..4276437 1 NC_007964.1 hypothetical protein 4276437 4032655 Nham_3899 Nitrobacter hamburgensis X14 hypothetical protein YP_579051.1 4276093 D 323097 CDS YP_579052.1 92119323 4032656 4278058..4278738 1 NC_007964.1 transposase, IS111A/IS1328/IS1533 4278738 4032656 Nham_3900 Nitrobacter hamburgensis X14 transposase, IS111A/IS1328/IS1533 YP_579052.1 4278058 D 323097 CDS YP_579053.1 92119324 4032657 4279188..4281257 1 NC_007964.1 recombinase 4281257 4032657 Nham_3901 Nitrobacter hamburgensis X14 recombinase YP_579053.1 4279188 D 323097 CDS YP_579054.1 92119325 4032659 complement(4281875..4282171) 1 NC_007964.1 hypothetical protein 4282171 4032659 Nham_3903 Nitrobacter hamburgensis X14 hypothetical protein YP_579054.1 4281875 R 323097 CDS YP_579055.1 92119326 4032661 complement(4282780..4283805) 1 NC_007964.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; in mycobacteria LigC has weak intrinsic nick joining activities and is not essential for growth; ATP-dependent DNA ligase 4283805 ligC 4032661 ligC Nitrobacter hamburgensis X14 ATP-dependent DNA ligase YP_579055.1 4282780 R 323097 CDS YP_579056.1 92119327 4032662 complement(4283832..4284641) 1 NC_007964.1 hypothetical protein 4284641 4032662 Nham_3906 Nitrobacter hamburgensis X14 hypothetical protein YP_579056.1 4283832 R 323097 CDS YP_579057.1 92119328 4032663 4284719..4287421 1 NC_007964.1 catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase 4287421 ligD 4032663 ligD Nitrobacter hamburgensis X14 ATP-dependent DNA ligase YP_579057.1 4284719 D 323097 CDS YP_579058.1 92119329 4032664 complement(4287452..4287667) 1 NC_007964.1 hypothetical protein 4287667 4032664 Nham_3908 Nitrobacter hamburgensis X14 hypothetical protein YP_579058.1 4287452 R 323097 CDS YP_579059.1 92119330 4032666 4288786..4289220 1 NC_007964.1 hypothetical protein 4289220 4032666 Nham_3910 Nitrobacter hamburgensis X14 hypothetical protein YP_579059.1 4288786 D 323097 CDS YP_579060.1 92119331 4032667 complement(4289263..4289520) 1 NC_007964.1 hypothetical protein 4289520 4032667 Nham_3911 Nitrobacter hamburgensis X14 hypothetical protein YP_579060.1 4289263 R 323097 CDS YP_579061.1 92119332 4032416 complement(4289539..4290699) 1 NC_007964.1 ribonuclease BN 4290699 4032416 Nham_3912 Nitrobacter hamburgensis X14 ribonuclease BN YP_579061.1 4289539 R 323097 CDS YP_579062.1 92119333 4032417 complement(4291479..4292342) 1 NC_007964.1 IstB-like ATP-binding protein 4292342 4032417 Nham_3913 Nitrobacter hamburgensis X14 IstB-like ATP-binding protein YP_579062.1 4291479 R 323097 CDS YP_579063.1 92119334 4032418 complement(4292342..4293841) 1 NC_007964.1 integrase catalytic subunit 4293841 4032418 Nham_3914 Nitrobacter hamburgensis X14 integrase catalytic subunit YP_579063.1 4292342 R 323097 CDS YP_579064.1 92119335 4032419 complement(4294087..4294803) 1 NC_007964.1 HAD family hydrolase 4294803 4032419 Nham_3915 Nitrobacter hamburgensis X14 HAD family hydrolase YP_579064.1 4294087 R 323097 CDS YP_579065.1 92119336 4032420 complement(4295164..4296696) 1 NC_007964.1 FAD dependent oxidoreductase 4296696 4032420 Nham_3916 Nitrobacter hamburgensis X14 FAD dependent oxidoreductase YP_579065.1 4295164 R 323097 CDS YP_579066.1 92119337 4032421 4297249..4298085 1 NC_007964.1 hypothetical protein 4298085 4032421 Nham_3917 Nitrobacter hamburgensis X14 hypothetical protein YP_579066.1 4297249 D 323097 CDS YP_579067.1 92119338 4032422 4298500..4298757 1 NC_007964.1 hypothetical protein 4298757 4032422 Nham_3918 Nitrobacter hamburgensis X14 hypothetical protein YP_579067.1 4298500 D 323097 CDS YP_579068.1 92119339 4032423 4299545..4299661 1 NC_007964.1 small heat shock protein 4299661 4032423 Nham_3919 Nitrobacter hamburgensis X14 small heat shock protein YP_579068.1 4299545 D 323097 CDS YP_579069.1 92119340 4032424 4300154..4300396 1 NC_007964.1 hypothetical protein 4300396 4032424 Nham_3920 Nitrobacter hamburgensis X14 hypothetical protein YP_579069.1 4300154 D 323097 CDS YP_579070.1 92119341 4032426 complement(4300722..4300961) 1 NC_007964.1 hypothetical protein 4300961 4032426 Nham_3922 Nitrobacter hamburgensis X14 hypothetical protein YP_579070.1 4300722 R 323097 CDS YP_579071.1 92119342 4032427 4301955..4303454 1 NC_007964.1 integrase catalytic subunit 4303454 4032427 Nham_3923 Nitrobacter hamburgensis X14 integrase catalytic subunit YP_579071.1 4301955 D 323097 CDS YP_579072.1 92119343 4032428 4303454..4304317 1 NC_007964.1 IstB-like ATP-binding protein 4304317 4032428 Nham_3924 Nitrobacter hamburgensis X14 IstB-like ATP-binding protein YP_579072.1 4303454 D 323097 CDS YP_579073.1 92119344 4032430 4305915..4306094 1 NC_007964.1 hypothetical protein 4306094 4032430 Nham_3926 Nitrobacter hamburgensis X14 hypothetical protein YP_579073.1 4305915 D 323097 CDS YP_579074.1 92119345 4032433 4308600..4309934 1 NC_007964.1 transposase 4309934 4032433 Nham_3929 Nitrobacter hamburgensis X14 transposase YP_579074.1 4308600 D 323097 CDS YP_579075.1 92119346 4032434 4310150..4310350 1 NC_007964.1 hypothetical protein 4310350 4032434 Nham_3930 Nitrobacter hamburgensis X14 hypothetical protein YP_579075.1 4310150 D 323097 CDS YP_579076.1 92119347 4031952 complement(4311030..4311473) 1 NC_007964.1 PRC-barrel protein 4311473 4031952 Nham_3931 Nitrobacter hamburgensis X14 PRC-barrel protein YP_579076.1 4311030 R 323097 CDS YP_579077.1 92119348 4031953 complement(4312312..4312578) 1 NC_007964.1 hypothetical protein 4312578 4031953 Nham_3932 Nitrobacter hamburgensis X14 hypothetical protein YP_579077.1 4312312 R 323097 CDS YP_579078.1 92119349 4031954 complement(4313069..4313386) 1 NC_007964.1 hypothetical protein 4313386 4031954 Nham_3933 Nitrobacter hamburgensis X14 hypothetical protein YP_579078.1 4313069 R 323097 CDS YP_579079.1 92119350 4031956 4313874..4315442 1 NC_007964.1 peptidoglycan binding domain-containing protein 4315442 4031956 Nham_3935 Nitrobacter hamburgensis X14 peptidoglycan binding domain-containing protein YP_579079.1 4313874 D 323097 CDS YP_579080.1 92119351 4031960 4316533..4317558 1 NC_007964.1 transposase IS116/IS110/IS902 4317558 4031960 Nham_3939 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_579080.1 4316533 D 323097 CDS YP_579081.1 92119352 4031961 complement(4317877..4318086) 1 NC_007964.1 hypothetical protein 4318086 4031961 Nham_3940 Nitrobacter hamburgensis X14 hypothetical protein YP_579081.1 4317877 R 323097 CDS YP_579082.1 92119353 4031962 4318212..4318532 1 NC_007964.1 hypothetical protein 4318532 4031962 Nham_3941 Nitrobacter hamburgensis X14 hypothetical protein YP_579082.1 4318212 D 323097 CDS YP_579083.1 92119354 4031963 4319338..4319700 1 NC_007964.1 hypothetical protein 4319700 4031963 Nham_3942 Nitrobacter hamburgensis X14 hypothetical protein YP_579083.1 4319338 D 323097 CDS YP_579084.1 92119355 4031964 complement(4319898..4320914) 1 NC_007964.1 transposase IS116/IS110/IS902 4320914 4031964 Nham_3943 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_579084.1 4319898 R 323097 CDS YP_579085.1 92119356 4031966 4321463..4321900 1 NC_007964.1 transposase 4321900 4031966 Nham_3945 Nitrobacter hamburgensis X14 transposase YP_579085.1 4321463 D 323097 CDS YP_579086.1 92119357 4031967 4321897..4322286 1 NC_007964.1 hypothetical protein 4322286 4031967 Nham_3946 Nitrobacter hamburgensis X14 hypothetical protein YP_579086.1 4321897 D 323097 CDS YP_579087.1 92119358 4031969 4323335..4323664 1 NC_007964.1 hypothetical protein 4323664 4031969 Nham_3948 Nitrobacter hamburgensis X14 hypothetical protein YP_579087.1 4323335 D 323097 CDS YP_579088.1 92119359 4031970 complement(4324521..4325000) 1 NC_007964.1 hypothetical protein 4325000 4031970 Nham_3949 Nitrobacter hamburgensis X14 hypothetical protein YP_579088.1 4324521 R 323097 CDS YP_579089.1 92119360 4031971 complement(4325285..4325818) 1 NC_007964.1 hypothetical protein 4325818 4031971 Nham_3950 Nitrobacter hamburgensis X14 hypothetical protein YP_579089.1 4325285 R 323097 CDS YP_579090.1 92119361 4031699 4325908..4326249 1 NC_007964.1 hypothetical protein 4326249 4031699 Nham_3951 Nitrobacter hamburgensis X14 hypothetical protein YP_579090.1 4325908 D 323097 CDS YP_579091.1 92119362 4031700 4326483..4326824 1 NC_007964.1 hypothetical protein 4326824 4031700 Nham_3952 Nitrobacter hamburgensis X14 hypothetical protein YP_579091.1 4326483 D 323097 CDS YP_579092.1 92119363 4031703 4328849..4329877 1 NC_007964.1 transposase IS116/IS110/IS902 4329877 4031703 Nham_3955 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_579092.1 4328849 D 323097 CDS YP_579093.1 92119364 4031704 4330255..4330770 1 NC_007964.1 nuclease (SNase-like) 4330770 4031704 Nham_3956 Nitrobacter hamburgensis X14 nuclease (SNase-like) YP_579093.1 4330255 D 323097 CDS YP_579094.1 92119365 4031705 4330851..4331111 1 NC_007964.1 hypothetical protein 4331111 4031705 Nham_3957 Nitrobacter hamburgensis X14 hypothetical protein YP_579094.1 4330851 D 323097 CDS YP_579095.1 92119366 4031706 4331560..4331712 1 NC_007964.1 hypothetical protein 4331712 4031706 Nham_3958 Nitrobacter hamburgensis X14 hypothetical protein YP_579095.1 4331560 D 323097 CDS YP_579096.1 92119367 4031707 complement(4331996..4332280) 1 NC_007964.1 transposase IS3/IS911 4332280 4031707 Nham_3959 Nitrobacter hamburgensis X14 transposase IS3/IS911 YP_579096.1 4331996 R 323097 CDS YP_579097.1 92119368 4031708 4332557..4333036 1 NC_007964.1 hypothetical protein 4333036 4031708 Nham_3960 Nitrobacter hamburgensis X14 hypothetical protein YP_579097.1 4332557 D 323097 CDS YP_579098.1 92119369 4031709 4333038..4333610 1 NC_007964.1 membrane protein-like protein 4333610 4031709 Nham_3961 Nitrobacter hamburgensis X14 membrane protein-like protein YP_579098.1 4333038 D 323097 CDS YP_579099.1 92119370 4031710 complement(4333796..4334620) 1 NC_007964.1 hypothetical protein 4334620 4031710 Nham_3962 Nitrobacter hamburgensis X14 hypothetical protein YP_579099.1 4333796 R 323097 CDS YP_579100.1 92119371 4031712 complement(4336421..4337674) 1 NC_007964.1 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins 4337674 4031712 Nham_3964 Nitrobacter hamburgensis X14 peptidase M15B and M15C, D,D-carboxypeptidase VanY/endolysins YP_579100.1 4336421 R 323097 CDS YP_579101.1 92119372 4031713 4337745..4339307 1 NC_007964.1 hypothetical protein 4339307 4031713 Nham_3965 Nitrobacter hamburgensis X14 hypothetical protein YP_579101.1 4337745 D 323097 CDS YP_579102.1 92119373 4031715 4339905..4340162 1 NC_007964.1 transposase of insertion sequence ISRm2011-2, orfA protein 4340162 4031715 Nham_3967 Nitrobacter hamburgensis X14 transposase of insertion sequence ISRm2011-2, orfA protein YP_579102.1 4339905 D 323097 CDS YP_579103.1 92119374 4031716 4340514..4341788 1 NC_007964.1 peptidase M20D, amidohydrolase 4341788 4031716 Nham_3968 Nitrobacter hamburgensis X14 peptidase M20D, amidohydrolase YP_579103.1 4340514 D 323097 CDS YP_579104.1 92119375 4031717 4341921..4342589 1 NC_007964.1 hypothetical protein 4342589 4031717 Nham_3969 Nitrobacter hamburgensis X14 hypothetical protein YP_579104.1 4341921 D 323097 CDS YP_579105.1 92119376 4030880 4342628..4343155 1 NC_007964.1 hypothetical protein 4343155 4030880 Nham_3970 Nitrobacter hamburgensis X14 hypothetical protein YP_579105.1 4342628 D 323097 CDS YP_579106.1 92119377 4030881 complement(4343234..4343701) 1 NC_007964.1 hypothetical protein 4343701 4030881 Nham_3971 Nitrobacter hamburgensis X14 hypothetical protein YP_579106.1 4343234 R 323097 CDS YP_579107.1 92119378 4030882 complement(4343722..4344153) 1 NC_007964.1 hypothetical protein 4344153 4030882 Nham_3972 Nitrobacter hamburgensis X14 hypothetical protein YP_579107.1 4343722 R 323097 CDS YP_579108.1 92119379 4030883 complement(4344217..4345446) 1 NC_007964.1 amidohydrolase 4345446 4030883 Nham_3973 Nitrobacter hamburgensis X14 amidohydrolase YP_579108.1 4344217 R 323097 CDS YP_579109.1 92119380 4030885 complement(4346307..4347044) 1 NC_007964.1 hypothetical protein 4347044 4030885 Nham_3975 Nitrobacter hamburgensis X14 hypothetical protein YP_579109.1 4346307 R 323097 CDS YP_579110.1 92119381 4030886 4347454..4348026 1 NC_007964.1 NADPH-dependent FMN reductase 4348026 4030886 Nham_3976 Nitrobacter hamburgensis X14 NADPH-dependent FMN reductase YP_579110.1 4347454 D 323097 CDS YP_579111.1 92119382 4030887 4348142..4348993 1 NC_007964.1 extradiol ring-cleavage dioxygenase III subunit B 4348993 4030887 Nham_3977 Nitrobacter hamburgensis X14 extradiol ring-cleavage dioxygenase III subunit B YP_579111.1 4348142 D 323097 CDS YP_579112.1 92119383 4030889 4351769..4352218 1 NC_007964.1 hypothetical protein 4352218 4030889 Nham_3979 Nitrobacter hamburgensis X14 hypothetical protein YP_579112.1 4351769 D 323097 CDS YP_579113.1 92119384 4030890 4352716..4353093 1 NC_007964.1 PRC-barrel protein 4353093 4030890 Nham_3980 Nitrobacter hamburgensis X14 PRC-barrel protein YP_579113.1 4352716 D 323097 CDS YP_579114.1 92119385 4030891 4353323..4354228 1 NC_007964.1 ribonuclease BN 4354228 4030891 Nham_3981 Nitrobacter hamburgensis X14 ribonuclease BN YP_579114.1 4353323 D 323097 CDS YP_579115.1 92119386 4030892 4354369..4355031 1 NC_007964.1 hypothetical protein 4355031 4030892 Nham_3982 Nitrobacter hamburgensis X14 hypothetical protein YP_579115.1 4354369 D 323097 CDS YP_579116.1 92119387 4030893 complement(4355139..4356524) 1 NC_007964.1 transposase IS66 4356524 4030893 Nham_3983 Nitrobacter hamburgensis X14 transposase IS66 YP_579116.1 4355139 R 323097 CDS YP_579117.1 92119388 4030895 4357487..4357639 1 NC_007964.1 hypothetical protein 4357639 4030895 Nham_3985 Nitrobacter hamburgensis X14 hypothetical protein YP_579117.1 4357487 D 323097 CDS YP_579118.1 92119389 4030896 complement(4357783..4357920) 1 NC_007964.1 hypothetical protein 4357920 4030896 Nham_3986 Nitrobacter hamburgensis X14 hypothetical protein YP_579118.1 4357783 R 323097 CDS YP_579119.1 92119390 4030897 complement(4358955..4359137) 1 NC_007964.1 hypothetical protein 4359137 4030897 Nham_3987 Nitrobacter hamburgensis X14 hypothetical protein YP_579119.1 4358955 R 323097 CDS YP_579120.1 92119391 4030898 complement(4359510..4359719) 1 NC_007964.1 CsbD-like protein 4359719 4030898 Nham_3988 Nitrobacter hamburgensis X14 CsbD-like protein YP_579120.1 4359510 R 323097 CDS YP_579121.1 92119392 4030899 complement(4359910..4360233) 1 NC_007964.1 hypothetical protein 4360233 4030899 Nham_3989 Nitrobacter hamburgensis X14 hypothetical protein YP_579121.1 4359910 R 323097 CDS YP_579122.1 92119393 4031014 complement(4360264..4361562) 1 NC_007964.1 chemotaxis protein CheR 4361562 4031014 Nham_3990 Nitrobacter hamburgensis X14 chemotaxis protein CheR YP_579122.1 4360264 R 323097 CDS YP_579123.1 92119394 4031015 4361759..4363687 1 NC_007964.1 ABC transporter 4363687 4031015 Nham_3991 Nitrobacter hamburgensis X14 ABC transporter YP_579123.1 4361759 D 323097 CDS YP_579124.1 92119395 4031016 4363684..4363917 1 NC_007964.1 hypothetical protein 4363917 4031016 Nham_3992 Nitrobacter hamburgensis X14 hypothetical protein YP_579124.1 4363684 D 323097 CDS YP_579125.1 92119396 4031017 complement(4364236..4364844) 1 NC_007964.1 hypothetical protein 4364844 4031017 Nham_3993 Nitrobacter hamburgensis X14 hypothetical protein YP_579125.1 4364236 R 323097 CDS YP_579126.1 92119397 4031018 4365012..4365515 1 NC_007964.1 transposase and inactivated derivatives-like 4365515 4031018 Nham_3994 Nitrobacter hamburgensis X14 transposase and inactivated derivatives-like YP_579126.1 4365012 D 323097 CDS YP_579127.1 92119398 4031019 4365522..4366775 1 NC_007964.1 transposase IS116/IS110/IS902 4366775 4031019 Nham_3995 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_579127.1 4365522 D 323097 CDS YP_579128.1 92119399 4031020 complement(4367305..4368336) 1 NC_007964.1 transposase IS116/IS110/IS902 4368336 4031020 Nham_3996 Nitrobacter hamburgensis X14 transposase IS116/IS110/IS902 YP_579128.1 4367305 R 323097 CDS YP_579129.1 92119400 4031022 complement(4368855..4369946) 1 NC_007964.1 DNA topoisomerase I 4369946 4031022 Nham_3998 Nitrobacter hamburgensis X14 DNA topoisomerase I YP_579129.1 4368855 R 323097 CDS YP_579130.1 92119401 4031023 4370498..4371079 1 NC_007964.1 hypothetical protein 4371079 4031023 Nham_3999 Nitrobacter hamburgensis X14 hypothetical protein YP_579130.1 4370498 D 323097 CDS YP_579131.1 92119402 4031025 4371397..4372032 1 NC_007964.1 PA-phosphatase-like phosphoesterase 4372032 4031025 Nham_4001 Nitrobacter hamburgensis X14 PA-phosphatase-like phosphoesterase YP_579131.1 4371397 D 323097 CDS YP_579132.1 92119403 4031026 4372156..4372503 1 NC_007964.1 hypothetical protein 4372503 4031026 Nham_4002 Nitrobacter hamburgensis X14 hypothetical protein YP_579132.1 4372156 D 323097 CDS YP_579133.1 92119404 4031027 4372500..4372934 1 NC_007964.1 hypothetical protein 4372934 4031027 Nham_4003 Nitrobacter hamburgensis X14 hypothetical protein YP_579133.1 4372500 D 323097 CDS YP_579134.1 92119405 4031028 complement(4372828..4373298) 1 NC_007964.1 DNA-directed DNA polymerase 4373298 4031028 Nham_4004 Nitrobacter hamburgensis X14 DNA-directed DNA polymerase YP_579134.1 4372828 R 323097 CDS YP_579135.1 92119406 4031031 complement(4374110..4374859) 1 NC_007964.1 hypothetical protein 4374859 4031031 Nham_4006 Nitrobacter hamburgensis X14 hypothetical protein YP_579135.1 4374110 R 323097 CDS YP_579136.1 92119407 4032803 4375157..4375990 1 NC_007964.1 hypothetical protein 4375990 4032803 Nham_4007 Nitrobacter hamburgensis X14 hypothetical protein YP_579136.1 4375157 D 323097 CDS YP_579137.1 92119408 4032804 4376193..4377389 1 NC_007964.1 phage-related integrase 4377389 4032804 Nham_4008 Nitrobacter hamburgensis X14 phage-related integrase YP_579137.1 4376193 D 323097 CDS YP_579138.1 92119409 4032806 4377671..4378657 1 NC_007964.1 hypothetical protein 4378657 4032806 Nham_4009 Nitrobacter hamburgensis X14 hypothetical protein YP_579138.1 4377671 D 323097 CDS YP_579139.1 92119410 4032807 4378711..4380147 1 NC_007964.1 FAD linked oxidase-like protein 4380147 4032807 Nham_4010 Nitrobacter hamburgensis X14 FAD linked oxidase-like protein YP_579139.1 4378711 D 323097 CDS YP_579140.1 92119411 4032808 complement(4380350..4381114) 1 NC_007964.1 hypothetical protein 4381114 4032808 Nham_4011 Nitrobacter hamburgensis X14 hypothetical protein YP_579140.1 4380350 R 323097 CDS YP_579141.1 92119412 4032809 4381178..4381690 1 NC_007964.1 hypothetical protein 4381690 4032809 Nham_4012 Nitrobacter hamburgensis X14 hypothetical protein YP_579141.1 4381178 D 323097 CDS YP_579142.1 92119413 4032810 complement(4381703..4382233) 1 NC_007964.1 ISSpo6, transposase OrfB 4382233 4032810 Nham_4013 Nitrobacter hamburgensis X14 ISSpo6, transposase OrfB YP_579142.1 4381703 R 323097 CDS YP_579143.1 92119414 4032811 complement(4382280..4382657) 1 NC_007964.1 ISSpo6, transposase orf A 4382657 4032811 Nham_4014 Nitrobacter hamburgensis X14 ISSpo6, transposase orf A YP_579143.1 4382280 R 323097 CDS YP_579144.1 92119415 4032812 4382844..4383275 1 NC_007964.1 NUDIX hydrolase 4383275 4032812 Nham_4015 Nitrobacter hamburgensis X14 NUDIX hydrolase YP_579144.1 4382844 D 323097 CDS YP_579145.1 92119416 4032813 4383359..4383736 1 NC_007964.1 hypothetical protein 4383736 4032813 Nham_4016 Nitrobacter hamburgensis X14 hypothetical protein YP_579145.1 4383359 D 323097 CDS YP_579146.1 92119417 4032814 4383928..4384194 1 NC_007964.1 hypothetical protein 4384194 4032814 Nham_4017 Nitrobacter hamburgensis X14 hypothetical protein YP_579146.1 4383928 D 323097 CDS YP_579147.1 92119418 4032815 complement(4384212..4385606) 1 NC_007964.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 4385606 4032815 Nham_4018 Nitrobacter hamburgensis X14 dihydroorotase YP_579147.1 4384212 R 323097 CDS YP_579148.1 92119419 4032816 4385713..4386594 1 NC_007964.1 glycine cleavage T protein (aminomethyl transferase) 4386594 4032816 Nham_4019 Nitrobacter hamburgensis X14 glycine cleavage T protein (aminomethyl transferase) YP_579148.1 4385713 D 323097 CDS YP_579149.1 92119420 4032817 4386591..4387217 1 NC_007964.1 DNA-3-methyladenine glycosylase I 4387217 4032817 Nham_4020 Nitrobacter hamburgensis X14 DNA-3-methyladenine glycosylase I YP_579149.1 4386591 D 323097 CDS YP_579150.1 92119421 4032818 4387214..4387825 1 NC_007964.1 metal dependent phosphohydrolase 4387825 4032818 Nham_4021 Nitrobacter hamburgensis X14 metal dependent phosphohydrolase YP_579150.1 4387214 D 323097 CDS YP_579151.1 92119422 4032819 4387968..4388474 1 NC_007964.1 hypothetical protein 4388474 4032819 Nham_4022 Nitrobacter hamburgensis X14 hypothetical protein YP_579151.1 4387968 D 323097 CDS YP_579152.1 92119423 4032820 complement(4388588..4389358) 1 NC_007964.1 peptidase C26 4389358 4032820 Nham_4023 Nitrobacter hamburgensis X14 peptidase C26 YP_579152.1 4388588 R 323097 CDS YP_579153.1 92119424 4032821 4389822..4390187 1 NC_007964.1 hypothetical protein 4390187 4032821 Nham_4024 Nitrobacter hamburgensis X14 hypothetical protein YP_579153.1 4389822 D 323097 CDS YP_579154.1 92119425 4032747 complement(4390452..4391627) 1 NC_007964.1 hypothetical protein 4391627 4032747 Nham_4025 Nitrobacter hamburgensis X14 hypothetical protein YP_579154.1 4390452 R 323097 CDS YP_579155.1 92119426 4032750 complement(4393330..4393635) 1 NC_007964.1 XRE family plasmid maintenance system antidote protein 4393635 4032750 Nham_4027 Nitrobacter hamburgensis X14 XRE family plasmid maintenance system antidote protein YP_579155.1 4393330 R 323097 CDS YP_579156.1 92119427 4032751 complement(4393650..4393934) 1 NC_007964.1 plasmid maintenance system killer protein 4393934 4032751 Nham_4028 Nitrobacter hamburgensis X14 plasmid maintenance system killer protein YP_579156.1 4393650 R 323097 CDS YP_579157.1 92119428 4032752 complement(4394170..4395075) 1 NC_007964.1 peptidase M, neutral zinc metallopeptidases, zinc-binding site 4395075 4032752 Nham_4029 Nitrobacter hamburgensis X14 peptidase M, neutral zinc metallopeptidases, zinc-binding site YP_579157.1 4394170 R 323097 CDS YP_579158.1 92119429 4032753 4395727..4395996 1 NC_007964.1 hypothetical protein 4395996 4032753 Nham_4030 Nitrobacter hamburgensis X14 hypothetical protein YP_579158.1 4395727 D 323097 CDS YP_579159.1 92119430 4032755 complement(4399665..4400339) 1 NC_007964.1 hypothetical protein 4400339 4032755 Nham_4032 Nitrobacter hamburgensis X14 hypothetical protein YP_579159.1 4399665 R 323097 CDS YP_579160.1 92119431 4032758 complement(4401564..4401851) 1 NC_007964.1 hypothetical protein 4401851 4032758 Nham_4034 Nitrobacter hamburgensis X14 hypothetical protein YP_579160.1 4401564 R 323097 CDS YP_579161.1 92119432 4032759 complement(4401848..4402942) 1 NC_007964.1 response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase 4402942 4032759 Nham_4035 Nitrobacter hamburgensis X14 response regulator receiver (CheY-like) modulated metal dependent phosphohydrolase YP_579161.1 4401848 R 323097 CDS YP_579162.1 92119433 4032760 4403252..4403611 1 NC_007964.1 hypothetical protein 4403611 4032760 Nham_4036 Nitrobacter hamburgensis X14 hypothetical protein YP_579162.1 4403252 D 323097 CDS YP_579163.1 92119434 4032761 complement(4403669..4404376) 1 NC_007964.1 polysaccharide export protein 4404376 4032761 Nham_4037 Nitrobacter hamburgensis X14 polysaccharide export protein YP_579163.1 4403669 R 323097 CDS YP_579164.1 92119435 4032762 complement(4404480..4404794) 1 NC_007964.1 hypothetical protein 4404794 4032762 Nham_4038 Nitrobacter hamburgensis X14 hypothetical protein YP_579164.1 4404480 R 323097 CDS YP_579165.1 92119436 4032763 4405291..4405557 1 NC_007964.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 4405557 rpsT 4032763 rpsT Nitrobacter hamburgensis X14 30S ribosomal protein S20 YP_579165.1 4405291 D 323097 CDS YP_579166.1 92119437 4032746 4406668..4406940 1 NC_007964.1 hypothetical protein 4406940 4032746 Nham_4040 Nitrobacter hamburgensis X14 hypothetical protein YP_579166.1 4406668 D 323097 CDS