-- dump date 20120504_153843 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_316621.1 75674200 3677001 567..1994 1 NC_007406.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA 1994 dnaA 3677001 dnaA Nitrobacter winogradskyi Nb-255 chromosome replication initiator DnaA YP_316621.1 567 D 323098 CDS YP_316622.1 75674201 3677002 2211..3329 1 NC_007406.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 3329 3677002 Nwi_0002 Nitrobacter winogradskyi Nb-255 DNA polymerase III subunit beta YP_316622.1 2211 D 323098 CDS YP_316623.1 75674202 3676443 3391..4548 1 NC_007406.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 4548 recF 3676443 recF Nitrobacter winogradskyi Nb-255 recombination protein F YP_316623.1 3391 D 323098 CDS YP_316624.1 75674203 3676444 4812..7253 1 NC_007406.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 7253 gyrB 3676444 gyrB Nitrobacter winogradskyi Nb-255 DNA gyrase subunit B YP_316624.1 4812 D 323098 CDS YP_316625.1 75674204 3676445 complement(7303..7923) 1 NC_007406.1 hypothetical protein 7923 3676445 Nwi_0005 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316625.1 7303 R 323098 CDS YP_316626.1 75674205 3676446 complement(8214..8582) 1 NC_007406.1 transposase, IS4 8582 3676446 Nwi_0006 Nitrobacter winogradskyi Nb-255 transposase, IS4 YP_316626.1 8214 R 323098 CDS YP_316627.1 75674206 3676447 complement(8597..8995) 1 NC_007406.1 transposase 8995 3676447 Nwi_0007 Nitrobacter winogradskyi Nb-255 transposase YP_316627.1 8597 R 323098 CDS YP_316628.1 75674207 3676448 9288..9782 1 NC_007406.1 hypothetical protein 9782 3676448 Nwi_0008 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316628.1 9288 D 323098 CDS YP_316629.1 75674208 3676449 10086..10658 1 NC_007406.1 nitrogen-fixing NifU 10658 3676449 Nwi_0009 Nitrobacter winogradskyi Nb-255 nitrogen-fixing NifU YP_316629.1 10086 D 323098 CDS YP_316630.1 75674209 3676450 complement(10655..11857) 1 NC_007406.1 hypothetical protein 11857 3676450 Nwi_0010 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316630.1 10655 R 323098 CDS YP_316631.1 75674210 3676451 12141..12839 1 NC_007406.1 peptidase M22, glycoprotease 12839 3676451 Nwi_0011 Nitrobacter winogradskyi Nb-255 peptidase M22, glycoprotease YP_316631.1 12141 D 323098 CDS YP_316632.1 75674211 3676452 12836..13318 1 NC_007406.1 ribosomal-protein-alanine acetyltransferase 13318 3676452 Nwi_0012 Nitrobacter winogradskyi Nb-255 ribosomal-protein-alanine acetyltransferase YP_316632.1 12836 D 323098 CDS YP_316633.1 75674212 3676453 13439..13909 1 NC_007406.1 ferric-uptake regulator 13909 3676453 Nwi_0013 Nitrobacter winogradskyi Nb-255 ferric-uptake regulator YP_316633.1 13439 D 323098 CDS YP_316634.1 75674213 3676454 13929..15362 1 NC_007406.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 15362 3676454 Nwi_0014 Nitrobacter winogradskyi Nb-255 (dimethylallyl)adenosine tRNA methylthiotransferase YP_316634.1 13929 D 323098 CDS YP_316635.1 75674214 3676455 15367..16416 1 NC_007406.1 PhoH-like protein 16416 3676455 Nwi_0015 Nitrobacter winogradskyi Nb-255 PhoH-like protein YP_316635.1 15367 D 323098 CDS YP_316636.1 75674215 3676456 16416..16988 1 NC_007406.1 hypothetical protein 16988 3676456 Nwi_0016 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316636.1 16416 D 323098 CDS YP_316637.1 75674216 3676457 16989..18116 1 NC_007406.1 ctransporter-associated region 18116 3676457 Nwi_0017 Nitrobacter winogradskyi Nb-255 ctransporter-associated region YP_316637.1 16989 D 323098 CDS YP_316638.1 75674217 3676458 18113..19720 1 NC_007406.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 19720 lnt 3676458 lnt Nitrobacter winogradskyi Nb-255 apolipoprotein N-acyltransferase YP_316638.1 18113 D 323098 CDS YP_316639.1 75674218 3676459 19954..20373 1 NC_007406.1 XRE family transcriptional regulator 20373 3676459 Nwi_0019 Nitrobacter winogradskyi Nb-255 XRE family transcriptional regulator YP_316639.1 19954 D 323098 CDS YP_316640.1 75674219 3676460 20396..21169 1 NC_007406.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 21169 trmB 3676460 trmB Nitrobacter winogradskyi Nb-255 tRNA (guanine-N(7)-)-methyltransferase YP_316640.1 20396 D 323098 CDS YP_316641.1 75674220 3676461 21460..22242 1 NC_007406.1 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 22242 3676461 Nwi_0021 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316641.1 21460 D 323098 CDS YP_316642.1 75674221 3676462 22246..23862 1 NC_007406.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 23862 nusA 3676462 nusA Nitrobacter winogradskyi Nb-255 transcription elongation factor NusA YP_316642.1 22246 D 323098 CDS YP_316643.1 75674222 3675146 24107..24772 1 NC_007406.1 hypothetical protein 24772 3675146 Nwi_0023 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316643.1 24107 D 323098 CDS YP_316644.1 75674223 3675147 24841..27456 1 NC_007406.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 27456 infB 3675147 infB Nitrobacter winogradskyi Nb-255 translation initiation factor IF-2 YP_316644.1 24841 D 323098 CDS YP_316645.1 75674224 3675148 27584..28024 1 NC_007406.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 28024 rbfA 3675148 rbfA Nitrobacter winogradskyi Nb-255 ribosome-binding factor A YP_316645.1 27584 D 323098 CDS YP_316646.1 75674225 3675149 28031..29107 1 NC_007406.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 29107 truB 3675149 truB Nitrobacter winogradskyi Nb-255 tRNA pseudouridine synthase B YP_316646.1 28031 D 323098 CDS YP_316647.1 75674226 3675150 29114..29383 1 NC_007406.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 29383 rpsO 3675150 rpsO Nitrobacter winogradskyi Nb-255 30S ribosomal protein S15 YP_316647.1 29114 D 323098 CDS YP_316648.1 75674227 3675151 29730..31886 1 NC_007406.1 polynucleotide phosphorylase 31886 3675151 Nwi_0028 Nitrobacter winogradskyi Nb-255 polynucleotide phosphorylase YP_316648.1 29730 D 323098 CDS YP_316649.1 75674228 3675152 complement(32072..32986) 1 NC_007406.1 LysR family transcriptional regulator 32986 3675152 Nwi_0029 Nitrobacter winogradskyi Nb-255 LysR family transcriptional regulator YP_316649.1 32072 R 323098 CDS YP_316650.1 75674229 3675153 33243..35432 1 NC_007406.1 heme catalase/peroxidase 35432 3675153 Nwi_0030 Nitrobacter winogradskyi Nb-255 heme catalase/peroxidase YP_316650.1 33243 D 323098 CDS YP_316651.1 75674230 3675154 35623..36219 1 NC_007406.1 glutathione S-transferase 36219 3675154 Nwi_0031 Nitrobacter winogradskyi Nb-255 glutathione S-transferase YP_316651.1 35623 D 323098 CDS YP_316652.1 75674231 3675155 complement(36277..37110) 1 NC_007406.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 37110 3675155 Nwi_0032 Nitrobacter winogradskyi Nb-255 enoyl-ACP reductase YP_316652.1 36277 R 323098 CDS YP_316653.1 75674232 3675156 complement(37283..38506) 1 NC_007406.1 FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 38506 3675156 Nwi_0033 Nitrobacter winogradskyi Nb-255 3-oxoacyl-ACP synthase YP_316653.1 37283 R 323098 CDS YP_316654.1 75674233 3675157 complement(38590..39114) 1 NC_007406.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 39114 3675157 Nwi_0034 Nitrobacter winogradskyi Nb-255 3-hydroxydecanoyl-ACP dehydratase YP_316654.1 38590 R 323098 CDS YP_316655.1 75674234 3675158 39551..40057 1 NC_007406.1 ferric-uptake regulator 40057 3675158 Nwi_0035 Nitrobacter winogradskyi Nb-255 ferric-uptake regulator YP_316655.1 39551 D 323098 CDS YP_316656.1 75674235 3675159 complement(40312..40842) 1 NC_007406.1 hypothetical protein 40842 3675159 Nwi_0036 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316656.1 40312 R 323098 CDS YP_316657.1 75674236 3675160 41197..42198 1 NC_007406.1 Involved in the metabolism of aromatic amino acids; 2-hydroxyacid dehydrogenase 42198 3675160 Nwi_0037 Nitrobacter winogradskyi Nb-255 2-hydroxyacid dehydrogenase YP_316657.1 41197 D 323098 CDS YP_316658.1 75674237 3675161 complement(42286..43122) 1 NC_007406.1 UBA/THIF-type NAD/FAD binding fold 43122 3675161 Nwi_0038 Nitrobacter winogradskyi Nb-255 UBA/THIF-type NAD/FAD binding fold YP_316658.1 42286 R 323098 CDS YP_316659.1 75674238 3675162 43206..44549 1 NC_007406.1 hypothetical protein 44549 3675162 Nwi_0039 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316659.1 43206 D 323098 CDS YP_316660.1 75674239 3675163 complement(44680..45561) 1 NC_007406.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 45561 3675163 Nwi_0040 Nitrobacter winogradskyi Nb-255 formamidopyrimidine-DNA glycosylase YP_316660.1 44680 R 323098 CDS YP_316661.1 75674240 3675164 45682..46479 1 NC_007406.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 46479 ubiE 3675164 ubiE Nitrobacter winogradskyi Nb-255 ubiquinone/menaquinone biosynthesis methyltransferase YP_316661.1 45682 D 323098 CDS YP_316662.1 75674241 3676481 46476..48056 1 NC_007406.1 2-polyprenylphenol 6-hydroxylase 48056 3676481 Nwi_0042 Nitrobacter winogradskyi Nb-255 2-polyprenylphenol 6-hydroxylase YP_316662.1 46476 D 323098 CDS YP_316663.1 75674242 3676482 48119..49558 1 NC_007406.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; in the alphaproteobacteria, this protein contains an N-terminal SbtC-like domain; bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 49558 3676482 Nwi_0043 Nitrobacter winogradskyi Nb-255 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_316663.1 48119 D 323098 CDS YP_316664.1 75674243 3676483 49555..50013 1 NC_007406.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 50013 dut 3676483 dut Nitrobacter winogradskyi Nb-255 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_316664.1 49555 D 323098 CDS YP_316665.1 75674244 3676484 50291..52807 1 NC_007406.1 histidine kinase 52807 3676484 Nwi_0045 Nitrobacter winogradskyi Nb-255 histidine kinase YP_316665.1 50291 D 323098 CDS YP_316666.1 75674245 3676485 52804..54327 1 NC_007406.1 hypothetical protein 54327 3676485 Nwi_0046 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316666.1 52804 D 323098 CDS YP_316667.1 75674246 3676486 54432..54752 1 NC_007406.1 hypothetical protein 54752 3676486 Nwi_0047 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316667.1 54432 D 323098 CDS YP_316668.1 75674247 3676487 55254..55979 1 NC_007406.1 nucleotidyl transferase 55979 3676487 Nwi_0048 Nitrobacter winogradskyi Nb-255 nucleotidyl transferase YP_316668.1 55254 D 323098 CDS YP_316669.1 75674248 3676488 56100..59261 1 NC_007406.1 hypothetical protein 59261 3676488 Nwi_0049 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316669.1 56100 D 323098 CDS YP_316670.1 75674249 3676489 59255..62863 1 NC_007406.1 UvrD/REP helicase 62863 3676489 Nwi_0050 Nitrobacter winogradskyi Nb-255 UvrD/REP helicase YP_316670.1 59255 D 323098 CDS YP_316671.1 75674250 3676490 62959..63279 1 NC_007406.1 thioredoxin 63279 3676490 Nwi_0051 Nitrobacter winogradskyi Nb-255 thioredoxin YP_316671.1 62959 D 323098 CDS YP_316672.1 75674251 3676491 complement(63475..64803) 1 NC_007406.1 folylpolyglutamate synthetase 64803 3676491 Nwi_0052 Nitrobacter winogradskyi Nb-255 folylpolyglutamate synthetase YP_316672.1 63475 R 323098 CDS YP_316673.1 75674252 3676492 complement(64800..65759) 1 NC_007406.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 65759 3676492 Nwi_0053 Nitrobacter winogradskyi Nb-255 acetyl-CoA carboxylase subunit beta YP_316673.1 64800 R 323098 CDS YP_316674.1 75674253 3676493 complement(66066..66902) 1 NC_007406.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 66902 trpA 3676493 trpA Nitrobacter winogradskyi Nb-255 tryptophan synthase subunit alpha YP_316674.1 66066 R 323098 CDS YP_316675.1 75674254 3676494 complement(66899..68143) 1 NC_007406.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 68143 3676494 Nwi_0055 Nitrobacter winogradskyi Nb-255 tryptophan synthase subunit beta YP_316675.1 66899 R 323098 CDS YP_316676.1 75674255 3676495 complement(68285..68962) 1 NC_007406.1 catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; N-(5'-phosphoribosyl)anthranilate isomerase 68962 3676495 Nwi_0056 Nitrobacter winogradskyi Nb-255 N-(5'-phosphoribosyl)anthranilate isomerase YP_316676.1 68285 R 323098 CDS YP_316677.1 75674256 3676496 complement(69176..69523) 1 NC_007406.1 hypothetical protein 69523 3676496 Nwi_0057 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316677.1 69176 R 323098 CDS YP_316678.1 75674257 3676497 complement(69770..70075) 1 NC_007406.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 70075 ihfB 3676497 ihfB Nitrobacter winogradskyi Nb-255 integration host factor subunit beta YP_316678.1 69770 R 323098 CDS YP_316679.1 75674258 3676498 complement(70241..71224) 1 NC_007406.1 peptidase S49, SppA 71224 3676498 Nwi_0059 Nitrobacter winogradskyi Nb-255 peptidase S49, SppA YP_316679.1 70241 R 323098 CDS YP_316680.1 75674259 3676499 complement(71498..72238) 1 NC_007406.1 role in sulfur assimilation; CysZ-like protein 72238 3676499 Nwi_0060 Nitrobacter winogradskyi Nb-255 CysZ-like protein YP_316680.1 71498 R 323098 CDS YP_316681.1 75674260 3676500 complement(72425..72910) 1 NC_007406.1 hypothetical protein 72910 3676500 Nwi_0061 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316681.1 72425 R 323098 CDS YP_316682.1 75674261 3674261 complement(73016..74020) 1 NC_007406.1 hypothetical protein 74020 3674261 Nwi_0062 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316682.1 73016 R 323098 CDS YP_316683.1 75674262 3674262 74260..75702 1 NC_007406.1 amine oxidase 75702 3674262 Nwi_0063 Nitrobacter winogradskyi Nb-255 amine oxidase YP_316683.1 74260 D 323098 CDS YP_316684.1 75674263 3674263 75699..76367 1 NC_007406.1 hypothetical protein 76367 3674263 Nwi_0064 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316684.1 75699 D 323098 CDS YP_316685.1 75674264 3675533 complement(76495..78933) 1 NC_007406.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 78933 pheT 3675533 pheT Nitrobacter winogradskyi Nb-255 phenylalanyl-tRNA synthetase subunit beta YP_316685.1 76495 R 323098 CDS YP_316686.1 75674265 3675624 complement(78930..80039) 1 NC_007406.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 80039 pheS 3675624 pheS Nitrobacter winogradskyi Nb-255 phenylalanyl-tRNA synthetase subunit alpha YP_316686.1 78930 R 323098 CDS YP_316687.1 75674266 3675625 complement(80156..80515) 1 NC_007406.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 80515 rplT 3675625 rplT Nitrobacter winogradskyi Nb-255 50S ribosomal protein L20 YP_316687.1 80156 R 323098 CDS YP_316688.1 75674267 3675626 complement(80581..80781) 1 NC_007406.1 50S ribosomal protein L35 80781 rpmI 3675626 rpmI Nitrobacter winogradskyi Nb-255 50S ribosomal protein L35 YP_316688.1 80581 R 323098 CDS YP_316689.1 75674268 3675627 complement(81110..81625) 1 NC_007406.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 81625 infC 3675627 infC Nitrobacter winogradskyi Nb-255 translation initiation factor IF-3 YP_316689.1 81110 R 323098 CDS YP_316690.1 75674269 3675628 81853..82626 1 NC_007406.1 hypothetical protein 82626 3675628 Nwi_0070 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316690.1 81853 D 323098 CDS YP_316691.1 75674270 3675629 complement(82679..85012) 1 NC_007406.1 hypothetical protein 85012 3675629 Nwi_0071 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316691.1 82679 R 323098 CDS YP_316692.1 75674271 3675630 complement(85217..86920) 1 NC_007406.1 PAS sensor protein 86920 3675630 Nwi_0072 Nitrobacter winogradskyi Nb-255 PAS sensor protein YP_316692.1 85217 R 323098 CDS YP_316693.1 75674272 3675632 87836..88846 1 NC_007406.1 thioredoxin-like protein 88846 3675632 Nwi_0073 Nitrobacter winogradskyi Nb-255 thioredoxin-like protein YP_316693.1 87836 D 323098 CDS YP_316694.1 75674273 3675633 88990..89664 1 NC_007406.1 peptidase S16 89664 3675633 Nwi_0074 Nitrobacter winogradskyi Nb-255 peptidase S16 YP_316694.1 88990 D 323098 CDS YP_316695.1 75674274 3675634 89704..89904 1 NC_007406.1 hypothetical protein 89904 3675634 Nwi_0075 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316695.1 89704 D 323098 CDS YP_316696.1 75674275 3675635 complement(89965..90303) 1 NC_007406.1 nitrogen regulatory protein P-II 90303 3675635 Nwi_0076 Nitrobacter winogradskyi Nb-255 nitrogen regulatory protein P-II YP_316696.1 89965 R 323098 CDS YP_316697.1 75674276 3675636 90530..91414 1 NC_007406.1 hypothetical protein 91414 3675636 Nwi_0077 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316697.1 90530 D 323098 CDS YP_316698.1 75674277 3675637 complement(91510..92412) 1 NC_007406.1 acyl-CoA thioesterase 92412 3675637 Nwi_0078 Nitrobacter winogradskyi Nb-255 acyl-CoA thioesterase YP_316698.1 91510 R 323098 CDS YP_316699.1 75674278 3674408 92582..93802 1 NC_007406.1 2-octaprenyl-6-methoxyphenyl hydroxylase 93802 3674408 Nwi_0079 Nitrobacter winogradskyi Nb-255 2-octaprenyl-6-methoxyphenyl hydroxylase YP_316699.1 92582 D 323098 CDS YP_316700.1 75674279 3674409 complement(94175..94603) 1 NC_007406.1 hypothetical protein 94603 3674409 Nwi_0080 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316700.1 94175 R 323098 CDS YP_316701.1 75674280 3674410 complement(96113..97084) 1 NC_007406.1 ISSpo8, transposase 97084 3674410 Nwi_0081 Nitrobacter winogradskyi Nb-255 ISSpo8, transposase YP_316701.1 96113 R 323098 CDS YP_316702.1 75674281 3674411 97354..98625 1 NC_007406.1 class I and II aminotransferase 98625 3674411 Nwi_0082 Nitrobacter winogradskyi Nb-255 class I and II aminotransferase YP_316702.1 97354 D 323098 CDS YP_316703.1 75674282 3674412 98638..101139 1 NC_007406.1 DNA translocase FtsK 101139 3674412 Nwi_0083 Nitrobacter winogradskyi Nb-255 DNA translocase FtsK YP_316703.1 98638 D 323098 CDS YP_316704.1 75674283 3674851 101475..102251 1 NC_007406.1 Outer membrane lipoprotein carrier protein LolA 102251 3674851 Nwi_0084 Nitrobacter winogradskyi Nb-255 Outer membrane lipoprotein carrier protein LolA YP_316704.1 101475 D 323098 CDS YP_316705.1 75674284 3675050 102283..103170 1 NC_007406.1 exodeoxyribonuclease III 103170 3675050 Nwi_0085 Nitrobacter winogradskyi Nb-255 exodeoxyribonuclease III YP_316705.1 102283 D 323098 CDS YP_316706.1 75674285 3675051 complement(103274..103756) 1 NC_007406.1 cyclic nucleotide-binding protein 103756 3675051 Nwi_0086 Nitrobacter winogradskyi Nb-255 cyclic nucleotide-binding protein YP_316706.1 103274 R 323098 CDS YP_316707.1 75674286 3675052 complement(103980..104666) 1 NC_007406.1 transcriptional regulatory protein 104666 3675052 Nwi_0087 Nitrobacter winogradskyi Nb-255 transcriptional regulatory protein YP_316707.1 103980 R 323098 CDS YP_316708.1 75674287 3675053 104886..105455 1 NC_007406.1 hypothetical protein 105455 3675053 Nwi_0088 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316708.1 104886 D 323098 CDS YP_316709.1 75674288 3675054 complement(105622..106296) 1 NC_007406.1 hypothetical protein 106296 3675054 Nwi_0089 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316709.1 105622 R 323098 CDS YP_316710.1 75674289 3675055 complement(106293..106997) 1 NC_007406.1 glutathione S-transferase 106997 3675055 Nwi_0090 Nitrobacter winogradskyi Nb-255 glutathione S-transferase YP_316710.1 106293 R 323098 CDS YP_316711.1 75674290 3675056 107151..109802 1 NC_007406.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 109802 leuS 3675056 leuS Nitrobacter winogradskyi Nb-255 leucyl-tRNA synthetase YP_316711.1 107151 D 323098 CDS YP_316712.1 75674291 3675057 109789..110373 1 NC_007406.1 hypothetical protein 110373 3675057 Nwi_0092 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316712.1 109789 D 323098 CDS YP_316713.1 75674292 3674852 110384..111412 1 NC_007406.1 required for the assembly and function of the DNAX complex which are required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 111412 holA 3674852 holA Nitrobacter winogradskyi Nb-255 DNA polymerase III subunit delta YP_316713.1 110384 D 323098 CDS YP_316714.1 75674293 3674853 complement(111481..112362) 1 NC_007406.1 ParB-like partition protein 112362 3674853 Nwi_0094 Nitrobacter winogradskyi Nb-255 ParB-like partition protein YP_316714.1 111481 R 323098 CDS YP_316715.1 75674294 3674678 complement(112660..113529) 1 NC_007406.1 cobyrinic acid a,c-diamide synthase 113529 3674678 Nwi_0095 Nitrobacter winogradskyi Nb-255 cobyrinic acid a,c-diamide synthase YP_316715.1 112660 R 323098 CDS YP_316716.1 75674295 3674401 complement(113514..114347) 1 NC_007406.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 114347 gidB 3674401 gidB Nitrobacter winogradskyi Nb-255 16S rRNA methyltransferase GidB YP_316716.1 113514 R 323098 CDS YP_316717.1 75674296 3674854 complement(114370..116241) 1 NC_007406.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 116241 3674854 Nwi_0097 Nitrobacter winogradskyi Nb-255 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_316717.1 114370 R 323098 CDS YP_316718.1 75674297 3674298 complement(116402..117772) 1 NC_007406.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 117772 trmE 3674298 trmE Nitrobacter winogradskyi Nb-255 tRNA modification GTPase TrmE YP_316718.1 116402 R 323098 CDS YP_316719.1 75674298 3674299 118015..120045 1 NC_007406.1 hypothetical protein 120045 3674299 Nwi_0099 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316719.1 118015 D 323098 CDS YP_316720.1 75674299 3674300 complement(120114..121379) 1 NC_007406.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 121379 rho 3674300 rho Nitrobacter winogradskyi Nb-255 transcription termination factor Rho YP_316720.1 120114 R 323098 CDS YP_316721.1 75674300 3674301 complement(121775..122197) 1 NC_007406.1 hypothetical protein 122197 3674301 Nwi_0101 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316721.1 121775 R 323098 CDS YP_316722.1 75674301 3674302 122627..123469 1 NC_007406.1 hypothetical protein 123469 3674302 Nwi_0102 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316722.1 122627 D 323098 CDS YP_316723.1 75674302 3674303 123476..124084 1 NC_007406.1 Maf-like protein 124084 3674303 Nwi_0103 Nitrobacter winogradskyi Nb-255 Maf-like protein YP_316723.1 123476 D 323098 CDS YP_316724.1 75674303 3674304 124101..124700 1 NC_007406.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 124700 coaE 3674304 coaE Nitrobacter winogradskyi Nb-255 dephospho-CoA kinase YP_316724.1 124101 D 323098 CDS YP_316725.1 75674304 3674305 124822..125541 1 NC_007406.1 DNA polymerase III subunit epsilon 125541 3674305 Nwi_0105 Nitrobacter winogradskyi Nb-255 DNA polymerase III subunit epsilon YP_316725.1 124822 D 323098 CDS YP_316726.1 75674305 3674306 complement(125554..126033) 1 NC_007406.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 126033 3674306 Nwi_0106 Nitrobacter winogradskyi Nb-255 preprotein translocase subunit SecB YP_316726.1 125554 R 323098 CDS YP_316727.1 75674306 3674307 126485..127189 1 NC_007406.1 hypothetical protein 127189 3674307 Nwi_0107 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316727.1 126485 D 323098 CDS YP_316728.1 75674307 3674308 127167..128675 1 NC_007406.1 membrane-bound lytic murein transglycosylase 128675 3674308 Nwi_0108 Nitrobacter winogradskyi Nb-255 membrane-bound lytic murein transglycosylase YP_316728.1 127167 D 323098 CDS YP_316729.1 75674308 3675876 128672..129250 1 NC_007406.1 Smr protein/MutS2 129250 3675876 Nwi_0109 Nitrobacter winogradskyi Nb-255 Smr protein/MutS2 YP_316729.1 128672 D 323098 CDS YP_316730.1 75674309 3675877 129419..130759 1 NC_007406.1 histidine kinase 130759 3675877 Nwi_0110 Nitrobacter winogradskyi Nb-255 histidine kinase YP_316730.1 129419 D 323098 CDS YP_316731.1 75674310 3675878 130852..131406 1 NC_007406.1 Fis family transcriptional regulator 131406 3675878 Nwi_0111 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_316731.1 130852 D 323098 CDS YP_316732.1 75674311 3675879 complement(131536..132027) 1 NC_007406.1 hypothetical protein 132027 3675879 Nwi_0112 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316732.1 131536 R 323098 CDS YP_316733.1 75674312 3675880 132223..132897 1 NC_007406.1 beta-lactamase-like protein 132897 3675880 Nwi_0113 Nitrobacter winogradskyi Nb-255 beta-lactamase-like protein YP_316733.1 132223 D 323098 CDS YP_316734.1 75674313 3675881 complement(133009..135828) 1 NC_007406.1 Signal transduction histidine kinase 135828 3675881 Nwi_0114 Nitrobacter winogradskyi Nb-255 Signal transduction histidine kinase YP_316734.1 133009 R 323098 CDS YP_316735.1 75674314 3675882 135988..136941 1 NC_007406.1 hypothetical protein 136941 3675882 Nwi_0115 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316735.1 135988 D 323098 CDS YP_316736.1 75674315 3675883 136979..137335 1 NC_007406.1 hypothetical protein 137335 3675883 Nwi_0116 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316736.1 136979 D 323098 CDS YP_316737.1 75674316 3675884 137378..138331 1 NC_007406.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 138331 3675884 Nwi_0117 Nitrobacter winogradskyi Nb-255 glutathione synthetase YP_316737.1 137378 D 323098 CDS YP_316738.1 75674317 3676187 138414..139952 1 NC_007406.1 Mg chelatase-like protein 139952 3676187 Nwi_0118 Nitrobacter winogradskyi Nb-255 Mg chelatase-like protein YP_316738.1 138414 D 323098 CDS YP_316739.1 75674318 3676188 140139..142403 1 NC_007406.1 Signal transduction histidine kinase 142403 3676188 Nwi_0119 Nitrobacter winogradskyi Nb-255 Signal transduction histidine kinase YP_316739.1 140139 D 323098 CDS YP_316740.1 75674319 3676189 complement(142490..143446) 1 NC_007406.1 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 143446 3676189 Nwi_0120 Nitrobacter winogradskyi Nb-255 pantothenate kinase YP_316740.1 142490 R 323098 CDS YP_316741.2 162139853 3676190 complement(143665..143988) 1 NC_007406.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribolsyl)-ATP in histidine biosynthesis; phosphoribosyl-ATP pyrophosphatase 143988 hisE 3676190 hisE Nitrobacter winogradskyi Nb-255 phosphoribosyl-ATP pyrophosphatase YP_316741.2 143665 R 323098 CDS YP_316742.1 75674321 3676191 complement(144067..144843) 1 NC_007406.1 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 144843 3676191 Nwi_0122 Nitrobacter winogradskyi Nb-255 imidazole glycerol phosphate synthase subunit HisF YP_316742.1 144067 R 323098 CDS YP_316743.2 162139852 3676192 complement(144859..145599) 1 NC_007406.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 145599 3676192 Nwi_0123 Nitrobacter winogradskyi Nb-255 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_316743.2 144859 R 323098 CDS YP_316744.1 75674323 3676193 complement(145596..146246) 1 NC_007406.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 146246 hisH 3676193 hisH Nitrobacter winogradskyi Nb-255 imidazole glycerol phosphate synthase subunit HisH YP_316744.1 145596 R 323098 CDS YP_316745.1 75674324 3676194 complement(146243..146791) 1 NC_007406.1 hypothetical protein 146791 3676194 Nwi_0125 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316745.1 146243 R 323098 CDS YP_316746.1 75674325 3676195 complement(146794..147387) 1 NC_007406.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 147387 hisB 3676195 hisB Nitrobacter winogradskyi Nb-255 imidazoleglycerol-phosphate dehydratase YP_316746.1 146794 R 323098 CDS YP_316747.1 75674326 3676196 147685..148239 1 NC_007406.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 148239 3676196 Nwi_0127 Nitrobacter winogradskyi Nb-255 ATP-dependent protease peptidase subunit YP_316747.1 147685 D 323098 CDS YP_316748.1 75674327 3676197 148243..148722 1 NC_007406.1 N-acetyltransferase 148722 3676197 Nwi_0128 Nitrobacter winogradskyi Nb-255 N-acetyltransferase YP_316748.1 148243 D 323098 CDS YP_316749.1 75674328 3676198 148795..150096 1 NC_007406.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 150096 hslU 3676198 hslU Nitrobacter winogradskyi Nb-255 ATP-dependent protease ATP-binding subunit HslU YP_316749.1 148795 D 323098 CDS YP_316750.1 75674329 3676199 150408..151742 1 NC_007406.1 polyhydroxyalkanoate depolymerase 151742 3676199 Nwi_0130 Nitrobacter winogradskyi Nb-255 polyhydroxyalkanoate depolymerase YP_316750.1 150408 D 323098 CDS YP_316751.1 75674330 3676200 151952..152788 1 NC_007406.1 hypothetical protein 152788 3676200 Nwi_0131 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316751.1 151952 D 323098 CDS YP_316752.1 75674331 3676201 complement(152996..155200) 1 NC_007406.1 penicillin-binding protein 1A 155200 3676201 Nwi_0132 Nitrobacter winogradskyi Nb-255 penicillin-binding protein 1A YP_316752.1 152996 R 323098 CDS YP_316753.1 75674332 3676202 complement(155426..158203) 1 NC_007406.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 158203 3676202 Nwi_0133 Nitrobacter winogradskyi Nb-255 PII uridylyl-transferase YP_316753.1 155426 R 323098 CDS YP_316754.1 75674333 3676203 158519..159523 1 NC_007406.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; heat shock protein 33 159523 hslO 3676203 hslO Nitrobacter winogradskyi Nb-255 heat shock protein 33 YP_316754.1 158519 D 323098 CDS YP_316755.1 75674334 3676204 complement(159648..160361) 1 NC_007406.1 protein associated with Co2+ and Mg2+ efflux; ApaG protein 160361 apaG 3676204 apaG Nitrobacter winogradskyi Nb-255 ApaG protein YP_316755.1 159648 R 323098 CDS YP_316756.1 75674335 3674417 160453..161700 1 NC_007406.1 acyltransferase 161700 3674417 Nwi_0136 Nitrobacter winogradskyi Nb-255 acyltransferase YP_316756.1 160453 D 323098 CDS YP_316757.1 75674336 3674133 161697..162458 1 NC_007406.1 hypothetical protein 162458 3674133 Nwi_0137 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316757.1 161697 D 323098 CDS YP_316758.1 75674337 3674134 162455..163438 1 NC_007406.1 lysophospholipase L1 and related esterase 163438 3674134 Nwi_0138 Nitrobacter winogradskyi Nb-255 lysophospholipase L1 and related esterase YP_316758.1 162455 D 323098 CDS YP_316759.1 75674338 3674135 complement(163474..164667) 1 NC_007406.1 catalyzes the conversion of O-succinylhomoserine and sulfide to homocysteine; second step in methionine biosynthesis; O-succinylhomoserine sulfhydrylase 164667 3674135 Nwi_0139 Nitrobacter winogradskyi Nb-255 O-succinylhomoserine sulfhydrylase YP_316759.1 163474 R 323098 CDS YP_316760.1 75674339 3674136 164942..166048 1 NC_007406.1 Catalyzes the deamination of dCTP to form dUTP; 2'-deoxycytidine 5'-triphosphate deaminase 166048 3674136 Nwi_0140 Nitrobacter winogradskyi Nb-255 2'-deoxycytidine 5'-triphosphate deaminase YP_316760.1 164942 D 323098 CDS YP_316761.1 75674340 3674137 166460..166840 1 NC_007406.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 166840 3674137 Nwi_0141 Nitrobacter winogradskyi Nb-255 camphor resistance protein CrcB YP_316761.1 166460 D 323098 CDS YP_316762.1 75674341 3674139 167204..167488 1 NC_007406.1 hypothetical protein 167488 3674139 Nwi_0142 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316762.1 167204 D 323098 CDS YP_316763.1 75674342 3674140 167648..168124 1 NC_007406.1 hypothetical protein 168124 3674140 Nwi_0143 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316763.1 167648 D 323098 CDS YP_316764.1 75674343 3674141 168478..169071 1 NC_007406.1 electron transport protein SCO1/SenC 169071 3674141 Nwi_0144 Nitrobacter winogradskyi Nb-255 electron transport protein SCO1/SenC YP_316764.1 168478 D 323098 CDS YP_316765.1 75674344 3674142 complement(169062..169712) 1 NC_007406.1 glycosyl transferase 169712 3674142 Nwi_0145 Nitrobacter winogradskyi Nb-255 glycosyl transferase YP_316765.1 169062 R 323098 CDS YP_316766.1 75674345 3674143 169807..170268 1 NC_007406.1 hypothetical protein 170268 3674143 Nwi_0146 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316766.1 169807 D 323098 CDS YP_316767.1 75674346 3674144 complement(171280..172266) 1 NC_007406.1 transposase 172266 3674144 Nwi_0147 Nitrobacter winogradskyi Nb-255 transposase YP_316767.1 171280 R 323098 CDS YP_316768.1 75674347 3674145 complement(172784..173245) 1 NC_007406.1 hypothetical protein 173245 3674145 Nwi_0148 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316768.1 172784 R 323098 CDS YP_316769.1 75674348 3674146 complement(173398..174750) 1 NC_007406.1 glycosyl transferase 174750 3674146 Nwi_0149 Nitrobacter winogradskyi Nb-255 glycosyl transferase YP_316769.1 173398 R 323098 CDS YP_316770.1 75674349 3674147 174846..175766 1 NC_007406.1 ABC transporter substrate-binding protein 175766 3674147 Nwi_0150 Nitrobacter winogradskyi Nb-255 ABC transporter substrate-binding protein YP_316770.1 174846 D 323098 CDS YP_316771.1 75674350 3674148 175870..177501 1 NC_007406.1 class I; LysRS1; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri this enzyme charges both tRNA molecules for lysine that exist in this organism (but the tRNALysUUU very poorly) and in the presence of LysRS2 can charge tRNAPyl with lysine; lysyl-tRNA synthetase 177501 lysK 3674148 lysK Nitrobacter winogradskyi Nb-255 lysyl-tRNA synthetase YP_316771.1 175870 D 323098 CDS YP_316772.1 75674351 3674149 177645..178163 1 NC_007406.1 ErfK/YbiS/YcfS/YnhG 178163 3674149 Nwi_0152 Nitrobacter winogradskyi Nb-255 ErfK/YbiS/YcfS/YnhG YP_316772.1 177645 D 323098 CDS YP_316773.1 75674352 3674150 178339..178902 1 NC_007406.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 178902 pyrE 3674150 pyrE Nitrobacter winogradskyi Nb-255 orotate phosphoribosyltransferase YP_316773.1 178339 D 323098 CDS YP_316774.1 75674353 3674170 complement(178934..179506) 1 NC_007406.1 nuclease 179506 3674170 Nwi_0154 Nitrobacter winogradskyi Nb-255 nuclease YP_316774.1 178934 R 323098 CDS YP_316775.1 75674354 3674171 complement(179739..180005) 1 NC_007406.1 hypothetical protein 180005 3674171 Nwi_0155 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316775.1 179739 R 323098 CDS YP_316776.1 75674355 3674172 180146..181498 1 NC_007406.1 tRNA and rRNA cytosine-C5-methylase 181498 3674172 Nwi_0156 Nitrobacter winogradskyi Nb-255 tRNA and rRNA cytosine-C5-methylase YP_316776.1 180146 D 323098 CDS YP_316777.1 75674356 3674173 181625..183379 1 NC_007406.1 heparinase II/III-like 183379 3674173 Nwi_0157 Nitrobacter winogradskyi Nb-255 heparinase II/III-like YP_316777.1 181625 D 323098 CDS YP_316778.1 75674357 3674174 183485..185077 1 NC_007406.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 185077 purH 3674174 purH Nitrobacter winogradskyi Nb-255 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_316778.1 183485 D 323098 CDS YP_316779.1 75674358 3674175 185184..185954 1 NC_007406.1 cytochrome c, class I 185954 3674175 Nwi_0159 Nitrobacter winogradskyi Nb-255 cytochrome c, class I YP_316779.1 185184 D 323098 CDS YP_316780.1 75674359 3674176 complement(186074..187462) 1 NC_007406.1 major facilitator transporter 187462 3674176 Nwi_0160 Nitrobacter winogradskyi Nb-255 major facilitator transporter YP_316780.1 186074 R 323098 CDS YP_316781.1 75674360 3674873 187584..189338 1 NC_007406.1 gamma-glutamyltranspeptidase 189338 3674873 Nwi_0161 Nitrobacter winogradskyi Nb-255 gamma-glutamyltranspeptidase YP_316781.1 187584 D 323098 CDS YP_316782.1 75674361 3675775 189383..190732 1 NC_007406.1 multi anti extrusion protein MatE 190732 3675775 Nwi_0162 Nitrobacter winogradskyi Nb-255 multi anti extrusion protein MatE YP_316782.1 189383 D 323098 CDS YP_316783.1 75674362 3675776 190817..191737 1 NC_007406.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 191737 3675776 Nwi_0163 Nitrobacter winogradskyi Nb-255 2-dehydropantoate 2-reductase YP_316783.1 190817 D 323098 CDS YP_316784.1 75674363 3675777 complement(191782..192474) 1 NC_007406.1 glutathione S-transferase 192474 3675777 Nwi_0164 Nitrobacter winogradskyi Nb-255 glutathione S-transferase YP_316784.1 191782 R 323098 CDS YP_316785.1 75674364 3675778 192738..193544 1 NC_007406.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 193544 uppP 3675778 uppP Nitrobacter winogradskyi Nb-255 undecaprenyl pyrophosphate phosphatase YP_316785.1 192738 D 323098 CDS YP_316786.1 75674365 3675779 complement(193564..194625) 1 NC_007406.1 NAD-dependent epimerase/dehydratase 194625 3675779 Nwi_0166 Nitrobacter winogradskyi Nb-255 NAD-dependent epimerase/dehydratase YP_316786.1 193564 R 323098 CDS YP_316787.1 75674366 3675781 194958..195530 1 NC_007406.1 hypothetical protein 195530 3675781 Nwi_0167 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316787.1 194958 D 323098 CDS YP_316788.1 75674367 3675782 complement(195801..196160) 1 NC_007406.1 hypothetical protein 196160 3675782 Nwi_0168 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316788.1 195801 R 323098 CDS YP_316789.1 75674368 3675783 complement(196227..197042) 1 NC_007406.1 hypothetical protein 197042 3675783 Nwi_0169 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316789.1 196227 R 323098 CDS YP_316790.1 75674369 3675784 197184..197468 1 NC_007406.1 hypothetical protein 197468 3675784 Nwi_0170 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316790.1 197184 D 323098 CDS YP_316791.1 75674370 3676627 197468..198088 1 NC_007406.1 3'-5' exonuclease 198088 3676627 Nwi_0171 Nitrobacter winogradskyi Nb-255 3'-5' exonuclease YP_316791.1 197468 D 323098 CDS YP_316792.1 75674371 3676628 198297..198989 1 NC_007406.1 hypothetical protein 198989 3676628 Nwi_0172 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316792.1 198297 D 323098 CDS YP_316793.1 75674372 3676629 198986..199669 1 NC_007406.1 OstA-like protein 199669 3676629 Nwi_0173 Nitrobacter winogradskyi Nb-255 OstA-like protein YP_316793.1 198986 D 323098 CDS YP_316794.1 75674373 3676630 199980..200978 1 NC_007406.1 ABC transporter ATPase 200978 3676630 Nwi_0174 Nitrobacter winogradskyi Nb-255 ABC transporter ATPase YP_316794.1 199980 D 323098 CDS YP_316795.1 75674374 3676631 complement(201036..201323) 1 NC_007406.1 hypothetical protein 201323 3676631 Nwi_0175 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316795.1 201036 R 323098 CDS YP_316796.1 75674375 3676632 201488..201868 1 NC_007406.1 hypothetical protein 201868 3676632 Nwi_0176 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316796.1 201488 D 323098 CDS YP_316797.1 75674376 3676633 202121..203752 1 NC_007406.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 203752 3676633 Nwi_0177 Nitrobacter winogradskyi Nb-255 RNA polymerase factor sigma-54 YP_316797.1 202121 D 323098 CDS YP_316798.1 75674377 3676634 203809..204405 1 NC_007406.1 sigma 54 modulation protein/ribosomal protein S30EA 204405 3676634 Nwi_0178 Nitrobacter winogradskyi Nb-255 sigma 54 modulation protein/ribosomal protein S30EA YP_316798.1 203809 D 323098 CDS YP_316799.1 75674378 3676635 204654..205115 1 NC_007406.1 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN 205115 3676635 Nwi_0179 Nitrobacter winogradskyi Nb-255 PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_316799.1 204654 D 323098 CDS YP_316800.1 75674379 3676636 complement(205145..205675) 1 NC_007406.1 transposase, IS4 205675 3676636 Nwi_0180 Nitrobacter winogradskyi Nb-255 transposase, IS4 YP_316800.1 205145 R 323098 CDS YP_316801.1 75674380 3676637 complement(205528..205926) 1 NC_007406.1 transposase 205926 3676637 Nwi_0181 Nitrobacter winogradskyi Nb-255 transposase YP_316801.1 205528 R 323098 CDS YP_316802.1 75674381 3676638 complement(205982..207352) 1 NC_007406.1 glutamate--cysteine ligase 207352 3676638 Nwi_0182 Nitrobacter winogradskyi Nb-255 glutamate--cysteine ligase YP_316802.1 205982 R 323098 CDS YP_316803.1 75674382 3676639 207838..211017 1 NC_007406.1 Sel1 repeat-containing protein 211017 3676639 Nwi_0183 Nitrobacter winogradskyi Nb-255 Sel1 repeat-containing protein YP_316803.1 207838 D 323098 CDS YP_316804.1 75674383 3676640 211095..212126 1 NC_007406.1 hypothetical protein 212126 3676640 Nwi_0184 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316804.1 211095 D 323098 CDS YP_316805.1 75674384 3676641 212123..212914 1 NC_007406.1 hypothetical protein 212914 3676641 Nwi_0185 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316805.1 212123 D 323098 CDS YP_316806.1 75674385 3676642 complement(213080..213805) 1 NC_007406.1 metallophosphoesterase 213805 3676642 Nwi_0186 Nitrobacter winogradskyi Nb-255 metallophosphoesterase YP_316806.1 213080 R 323098 CDS YP_316807.1 75674386 3676643 complement(213813..216320) 1 NC_007406.1 DEAD/DEAH box helicase 216320 3676643 Nwi_0187 Nitrobacter winogradskyi Nb-255 DEAD/DEAH box helicase YP_316807.1 213813 R 323098 CDS YP_316808.1 75674387 3676644 216696..218057 1 NC_007406.1 outer membrane protein 218057 3676644 Nwi_0188 Nitrobacter winogradskyi Nb-255 outer membrane protein YP_316808.1 216696 D 323098 CDS YP_316809.1 75674388 3676645 218552..219475 1 NC_007406.1 metalloprotease; heat shock protein HtpX 219475 3676645 Nwi_0189 Nitrobacter winogradskyi Nb-255 heat shock protein HtpX YP_316809.1 218552 D 323098 CDS YP_316810.1 75674389 3676646 219789..221012 1 NC_007406.1 hypothetical protein 221012 3676646 Nwi_0190 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316810.1 219789 D 323098 CDS YP_316811.1 75674390 3676647 complement(221163..222323) 1 NC_007406.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 222323 3676647 Nwi_0191 Nitrobacter winogradskyi Nb-255 coproporphyrinogen III oxidase YP_316811.1 221163 R 323098 CDS YP_316812.1 75674391 3676648 complement(222310..222945) 1 NC_007406.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 222945 3676648 Nwi_0192 Nitrobacter winogradskyi Nb-255 deoxyribonucleotide triphosphate pyrophosphatase YP_316812.1 222310 R 323098 CDS YP_316813.1 75674392 3676649 complement(223063..223776) 1 NC_007406.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 223776 rph 3676649 rph Nitrobacter winogradskyi Nb-255 ribonuclease PH YP_316813.1 223063 R 323098 CDS YP_316814.1 75674393 3676650 223971..225059 1 NC_007406.1 Negative regulator of class I heat shock genes (grpE-dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons; heat-inducible transcription repressor 225059 hrcA 3676650 hrcA Nitrobacter winogradskyi Nb-255 heat-inducible transcription repressor YP_316814.1 223971 D 323098 CDS YP_316815.1 75674394 3676651 225153..225746 1 NC_007406.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 225746 3676651 Nwi_0195 Nitrobacter winogradskyi Nb-255 heat shock protein GrpE YP_316815.1 225153 D 323098 CDS YP_316816.1 75674395 3676652 complement(225812..226750) 1 NC_007406.1 hypothetical protein 226750 3676652 Nwi_0196 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316816.1 225812 R 323098 CDS YP_316817.1 75674396 3676653 227144..229036 1 NC_007406.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 229036 dnaK 3676653 dnaK Nitrobacter winogradskyi Nb-255 molecular chaperone DnaK YP_316817.1 227144 D 323098 CDS YP_316818.1 75674397 3676654 229185..230321 1 NC_007406.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ 230321 3676654 Nwi_0198 Nitrobacter winogradskyi Nb-255 molecular chaperone DnaJ YP_316818.1 229185 D 323098 CDS YP_316819.1 75674398 3676655 230415..231017 1 NC_007406.1 ribosomal RNA adenine methylase transferase 231017 3676655 Nwi_0199 Nitrobacter winogradskyi Nb-255 ribosomal RNA adenine methylase transferase YP_316819.1 230415 D 323098 CDS YP_316820.1 75674399 3676656 231103..231696 1 NC_007406.1 NADPH-dependent FMN reductase 231696 3676656 Nwi_0200 Nitrobacter winogradskyi Nb-255 NADPH-dependent FMN reductase YP_316820.1 231103 D 323098 CDS YP_316821.1 75674400 3676657 231747..232613 1 NC_007406.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 232613 3676657 Nwi_0201 Nitrobacter winogradskyi Nb-255 dihydrodipicolinate reductase YP_316821.1 231747 D 323098 CDS YP_316822.1 75674401 3676658 232780..233403 1 NC_007406.1 catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 233403 3676658 Nwi_0202 Nitrobacter winogradskyi Nb-255 phosphoglyceromutase YP_316822.1 232780 D 323098 CDS YP_316823.1 75674402 3676659 complement(233410..234354) 1 NC_007406.1 methylated-DNA--protein-cysteine methyltransferase 234354 3676659 Nwi_0203 Nitrobacter winogradskyi Nb-255 methylated-DNA--protein-cysteine methyltransferase YP_316823.1 233410 R 323098 CDS YP_316824.1 75674403 3676660 complement(234373..234897) 1 NC_007406.1 hypothetical protein 234897 3676660 Nwi_0204 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316824.1 234373 R 323098 CDS YP_316825.1 75674404 3676661 235058..235816 1 NC_007406.1 endonuclease III/Nth 235816 3676661 Nwi_0205 Nitrobacter winogradskyi Nb-255 endonuclease III/Nth YP_316825.1 235058 D 323098 CDS YP_316826.1 75674405 3676662 complement(236083..237786) 1 NC_007406.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 237786 rpsA 3676662 rpsA Nitrobacter winogradskyi Nb-255 30S ribosomal protein S1 YP_316826.1 236083 R 323098 CDS YP_316827.1 75674406 3676663 complement(238140..238847) 1 NC_007406.1 methyltransferase FkbM 238847 3676663 Nwi_0207 Nitrobacter winogradskyi Nb-255 methyltransferase FkbM YP_316827.1 238140 R 323098 CDS YP_316828.1 75674407 3676664 complement(238874..239512) 1 NC_007406.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 239512 cmk 3676664 cmk Nitrobacter winogradskyi Nb-255 cytidylate kinase YP_316828.1 238874 R 323098 CDS YP_316829.1 75674408 3676665 complement(239509..240858) 1 NC_007406.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 240858 3676665 Nwi_0209 Nitrobacter winogradskyi Nb-255 3-phosphoshikimate 1-carboxyvinyltransferase YP_316829.1 239509 R 323098 CDS YP_316830.1 75674409 3676666 241005..241418 1 NC_007406.1 hypothetical protein 241418 3676666 Nwi_0210 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316830.1 241005 D 323098 CDS YP_316831.1 75674410 3676668 242018..242443 1 NC_007406.1 heat shock protein Hsp20 242443 3676668 Nwi_0211 Nitrobacter winogradskyi Nb-255 heat shock protein Hsp20 YP_316831.1 242018 D 323098 CDS YP_316832.1 75674411 3676669 242542..242808 1 NC_007406.1 hypothetical protein 242808 3676669 Nwi_0212 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316832.1 242542 D 323098 CDS YP_316833.1 75674412 3676670 243124..244968 1 NC_007406.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 244968 3676670 Nwi_0213 Nitrobacter winogradskyi Nb-255 dihydroxy-acid dehydratase YP_316833.1 243124 D 323098 CDS YP_316834.1 75674413 3676671 245200..245520 1 NC_007406.1 transposase 245520 3676671 Nwi_0214 Nitrobacter winogradskyi Nb-255 transposase YP_316834.1 245200 D 323098 CDS YP_316835.1 75674414 3676672 245675..245902 1 NC_007406.1 IS4 family transposase 245902 3676672 Nwi_0215 Nitrobacter winogradskyi Nb-255 IS4 family transposase YP_316835.1 245675 D 323098 CDS YP_316836.1 75674415 3676673 complement(245916..246959) 1 NC_007406.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 246959 3676673 Nwi_0216 Nitrobacter winogradskyi Nb-255 tryptophanyl-tRNA synthetase YP_316836.1 245916 R 323098 CDS YP_316837.1 75674416 3676674 complement(247059..248660) 1 NC_007406.1 virulence factor MVIN-like 248660 3676674 Nwi_0217 Nitrobacter winogradskyi Nb-255 virulence factor MVIN-like YP_316837.1 247059 R 323098 CDS YP_316838.1 75674417 3676675 248739..249740 1 NC_007406.1 PfkB protein 249740 3676675 Nwi_0218 Nitrobacter winogradskyi Nb-255 PfkB protein YP_316838.1 248739 D 323098 CDS YP_316839.1 75674418 3676676 complement(249826..250746) 1 NC_007406.1 pirin 250746 3676676 Nwi_0219 Nitrobacter winogradskyi Nb-255 pirin YP_316839.1 249826 R 323098 CDS YP_316840.1 75674419 3676677 complement(250980..251510) 1 NC_007406.1 hypothetical protein 251510 3676677 Nwi_0220 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316840.1 250980 R 323098 CDS YP_316841.1 75674420 3676678 complement(251695..253122) 1 NC_007406.1 C69 family peptidase 253122 3676678 Nwi_0221 Nitrobacter winogradskyi Nb-255 C69 family peptidase YP_316841.1 251695 R 323098 CDS YP_316842.1 75674421 3676679 complement(253282..253869) 1 NC_007406.1 invasion associated locus B 253869 3676679 Nwi_0222 Nitrobacter winogradskyi Nb-255 invasion associated locus B YP_316842.1 253282 R 323098 CDS YP_316843.1 75674422 3676680 254299..255156 1 NC_007406.1 cytochrome c oxidase, subunit II 255156 3676680 Nwi_0223 Nitrobacter winogradskyi Nb-255 cytochrome c oxidase, subunit II YP_316843.1 254299 D 323098 CDS YP_316844.1 75674423 3676681 255257..256876 1 NC_007406.1 cytochrome c oxidase subunit I 256876 3676681 Nwi_0224 Nitrobacter winogradskyi Nb-255 cytochrome c oxidase subunit I YP_316844.1 255257 D 323098 CDS YP_316845.1 75674424 3676682 256939..257877 1 NC_007406.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 257877 3676682 Nwi_0225 Nitrobacter winogradskyi Nb-255 protoheme IX farnesyltransferase YP_316845.1 256939 D 323098 CDS YP_316846.1 75674425 3676683 257894..258064 1 NC_007406.1 CoxF protein 258064 3676683 Nwi_0226 Nitrobacter winogradskyi Nb-255 CoxF protein YP_316846.1 257894 D 323098 CDS YP_316847.1 75674426 3676684 258071..258712 1 NC_007406.1 involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 258712 3676684 Nwi_0227 Nitrobacter winogradskyi Nb-255 cytochrome C oxidase assembly protein YP_316847.1 258071 D 323098 CDS YP_316848.1 75674427 3676685 258809..259663 1 NC_007406.1 cytochrome c oxidase subunit III 259663 3676685 Nwi_0228 Nitrobacter winogradskyi Nb-255 cytochrome c oxidase subunit III YP_316848.1 258809 D 323098 CDS YP_316849.1 75674428 3674679 259851..261269 1 NC_007406.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 261269 3674679 Nwi_0229 Nitrobacter winogradskyi Nb-255 threonine synthase YP_316849.1 259851 D 323098 CDS YP_316850.1 75674429 3676114 261266..262555 1 NC_007406.1 peptidase M16 262555 3676114 Nwi_0230 Nitrobacter winogradskyi Nb-255 peptidase M16 YP_316850.1 261266 D 323098 CDS YP_316851.1 75674430 3676115 262732..263316 1 NC_007406.1 N-acetyltransferase 263316 3676115 Nwi_0231 Nitrobacter winogradskyi Nb-255 N-acetyltransferase YP_316851.1 262732 D 323098 CDS YP_316852.1 75674431 3676116 complement(263471..264112) 1 NC_007406.1 ISRm2011-2 transposase 264112 3676116 Nwi_0232 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_316852.1 263471 R 323098 CDS YP_316853.1 75674432 3676117 complement(264064..264414) 1 NC_007406.1 transposase 264414 3676117 Nwi_0233 Nitrobacter winogradskyi Nb-255 transposase YP_316853.1 264064 R 323098 CDS YP_316854.1 75674433 3676118 264612..265322 1 NC_007406.1 hypothetical protein 265322 3676118 Nwi_0234 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316854.1 264612 D 323098 CDS YP_316855.1 75674434 3676119 complement(265711..266196) 1 NC_007406.1 H+-transporting two-sector ATPase subunit B/B' 266196 3676119 Nwi_0235 Nitrobacter winogradskyi Nb-255 H+-transporting two-sector ATPase subunit B/B' YP_316855.1 265711 R 323098 CDS YP_316856.1 75674435 3676120 complement(266205..266762) 1 NC_007406.1 H+-transporting two-sector ATPase subunit B/B' 266762 3676120 Nwi_0236 Nitrobacter winogradskyi Nb-255 H+-transporting two-sector ATPase subunit B/B' YP_316856.1 266205 R 323098 CDS YP_316857.1 75674436 3676121 complement(266826..267053) 1 NC_007406.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; ATP synthase F0F1 subunit C 267053 3676121 Nwi_0237 Nitrobacter winogradskyi Nb-255 ATP synthase F0F1 subunit C YP_316857.1 266826 R 323098 CDS YP_316858.1 75674437 3676122 complement(267106..267849) 1 NC_007406.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A 267849 3676122 Nwi_0238 Nitrobacter winogradskyi Nb-255 ATP synthase F0F1 subunit A YP_316858.1 267106 R 323098 CDS YP_316859.1 75674438 3676123 complement(267918..268301) 1 NC_007406.1 FoF1 ATP synthase subunit I 268301 3676123 Nwi_0239 Nitrobacter winogradskyi Nb-255 FoF1 ATP synthase subunit I YP_316859.1 267918 R 323098 CDS YP_316860.1 75674439 3676124 268849..269391 1 NC_007406.1 hypothetical protein 269391 3676124 Nwi_0240 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316860.1 268849 D 323098 CDS YP_316861.1 75674440 3676125 269923..270573 1 NC_007406.1 LuxR family transcriptional regulator 270573 3676125 Nwi_0241 Nitrobacter winogradskyi Nb-255 LuxR family transcriptional regulator YP_316861.1 269923 D 323098 CDS YP_316862.1 75674441 3676126 complement(270746..271975) 1 NC_007406.1 catalyzes the formation of 5-aminolevulinate from succinyl-CoA and glycine; 5-aminolevulinate synthase 271975 3676126 Nwi_0242 Nitrobacter winogradskyi Nb-255 5-aminolevulinate synthase YP_316862.1 270746 R 323098 CDS YP_316863.1 75674442 3676127 complement(272227..273252) 1 NC_007406.1 biotin synthase 273252 3676127 Nwi_0243 Nitrobacter winogradskyi Nb-255 biotin synthase YP_316863.1 272227 R 323098 CDS YP_316864.1 75674443 3676128 complement(273509..274234) 1 NC_007406.1 outer membrane protein 274234 3676128 Nwi_0244 Nitrobacter winogradskyi Nb-255 outer membrane protein YP_316864.1 273509 R 323098 CDS YP_316865.1 75674444 3674151 274793..275038 1 NC_007406.1 hypothetical protein 275038 3674151 Nwi_0245 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316865.1 274793 D 323098 CDS YP_316866.1 75674445 3674152 275304..276593 1 NC_007406.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 276593 3674152 Nwi_0246 Nitrobacter winogradskyi Nb-255 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_316866.1 275304 D 323098 CDS YP_316867.1 75674446 3674153 276758..278092 1 NC_007406.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 278092 hisD 3674153 hisD Nitrobacter winogradskyi Nb-255 histidinol dehydrogenase YP_316867.1 276758 D 323098 CDS YP_316868.1 75674447 3674154 278394..278897 1 NC_007406.1 hypothetical protein 278897 3674154 Nwi_0248 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316868.1 278394 D 323098 CDS YP_316869.1 75674448 3674155 278940..279452 1 NC_007406.1 low molecular weight phosphotyrosine protein phosphatase 279452 3674155 Nwi_0249 Nitrobacter winogradskyi Nb-255 low molecular weight phosphotyrosine protein phosphatase YP_316869.1 278940 D 323098 CDS YP_316870.1 75674449 3674157 280460..282085 1 NC_007406.1 helicase 282085 3674157 Nwi_0251 Nitrobacter winogradskyi Nb-255 helicase YP_316870.1 280460 D 323098 CDS YP_316871.1 75674450 3674158 complement(282177..282827) 1 NC_007406.1 LysR family transcriptional regulator 282827 3674158 Nwi_0252 Nitrobacter winogradskyi Nb-255 LysR family transcriptional regulator YP_316871.1 282177 R 323098 CDS YP_316872.1 75674451 3674159 complement(282940..283542) 1 NC_007406.1 ferric siderophore receptor protein 283542 3674159 Nwi_0253 Nitrobacter winogradskyi Nb-255 ferric siderophore receptor protein YP_316872.1 282940 R 323098 CDS YP_316873.1 75674452 3674160 complement(283688..286045) 1 NC_007406.1 Fis family transcriptional regulator 286045 3674160 Nwi_0254 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_316873.1 283688 R 323098 CDS YP_316874.1 75674453 3674161 complement(286133..287032) 1 NC_007406.1 antirestriction protein 287032 3674161 Nwi_0255 Nitrobacter winogradskyi Nb-255 antirestriction protein YP_316874.1 286133 R 323098 CDS YP_316875.1 75674454 3674162 287301..287795 1 NC_007406.1 hypothetical protein 287795 3674162 Nwi_0256 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316875.1 287301 D 323098 CDS YP_316876.1 75674455 3674163 287999..289213 1 NC_007406.1 hypothetical protein 289213 3674163 Nwi_0257 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316876.1 287999 D 323098 CDS YP_316877.1 75674456 3674164 complement(289260..290468) 1 NC_007406.1 hypothetical protein 290468 3674164 Nwi_0258 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316877.1 289260 R 323098 CDS YP_316878.1 75674457 3674165 complement(290585..291466) 1 NC_007406.1 hypothetical protein 291466 3674165 Nwi_0259 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316878.1 290585 R 323098 CDS YP_316879.1 75674458 3674166 complement(291472..292905) 1 NC_007406.1 hypothetical protein 292905 3674166 Nwi_0260 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316879.1 291472 R 323098 CDS YP_316880.1 75674459 3674167 complement(292902..293717) 1 NC_007406.1 hypothetical protein 293717 3674167 Nwi_0261 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316880.1 292902 R 323098 CDS YP_316881.1 75674460 3674168 complement(293714..294514) 1 NC_007406.1 hypothetical protein 294514 3674168 Nwi_0262 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316881.1 293714 R 323098 CDS YP_316882.1 75674461 3674169 294625..295182 1 NC_007406.1 hypothetical protein 295182 3674169 Nwi_0263 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316882.1 294625 D 323098 CDS YP_316883.1 75674462 3676169 295179..296537 1 NC_007406.1 hypothetical protein 296537 3676169 Nwi_0264 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316883.1 295179 D 323098 CDS YP_316884.1 75674463 3676170 296516..297718 1 NC_007406.1 XRE family transcriptional regulator 297718 3676170 Nwi_0265 Nitrobacter winogradskyi Nb-255 XRE family transcriptional regulator YP_316884.1 296516 D 323098 CDS YP_316885.1 75674464 3676171 297693..298310 1 NC_007406.1 hypothetical protein 298310 3676171 Nwi_0266 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316885.1 297693 D 323098 CDS YP_316886.1 75674465 3676172 complement(298560..301178) 1 NC_007406.1 hypothetical protein 301178 3676172 Nwi_0267 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316886.1 298560 R 323098 CDS YP_316887.1 75674466 3676173 complement(301186..302520) 1 NC_007406.1 restriction endonuclease S subunits 302520 3676173 Nwi_0268 Nitrobacter winogradskyi Nb-255 restriction endonuclease S subunits YP_316887.1 301186 R 323098 CDS YP_316888.1 75674467 3676174 complement(302517..304076) 1 NC_007406.1 N-6 DNA methylase 304076 3676174 Nwi_0269 Nitrobacter winogradskyi Nb-255 N-6 DNA methylase YP_316888.1 302517 R 323098 CDS YP_316889.1 75674468 3676175 complement(304063..306435) 1 NC_007406.1 DEAD/DEAH box helicase 306435 3676175 Nwi_0270 Nitrobacter winogradskyi Nb-255 DEAD/DEAH box helicase YP_316889.1 304063 R 323098 CDS YP_316890.1 75674469 3676176 complement(306432..306851) 1 NC_007406.1 excisionase 306851 3676176 Nwi_0271 Nitrobacter winogradskyi Nb-255 excisionase YP_316890.1 306432 R 323098 CDS YP_316891.1 75674470 3676177 complement(307106..308380) 1 NC_007406.1 phage integrase 308380 3676177 Nwi_0272 Nitrobacter winogradskyi Nb-255 phage integrase YP_316891.1 307106 R 323098 CDS YP_316892.1 75674471 3676178 complement(308686..308964) 1 NC_007406.1 hypothetical protein 308964 3676178 Nwi_0273 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316892.1 308686 R 323098 CDS YP_316893.1 75674472 3676179 309187..309432 1 NC_007406.1 hypothetical protein 309432 3676179 Nwi_0274 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316893.1 309187 D 323098 CDS YP_316894.1 75674473 3676180 309446..310525 1 NC_007406.1 phage integrase 310525 3676180 Nwi_0275 Nitrobacter winogradskyi Nb-255 phage integrase YP_316894.1 309446 D 323098 CDS YP_316895.1 75674474 3676182 complement(310827..311024) 1 NC_007406.1 zinc-binding protein 311024 3676182 Nwi_0276 Nitrobacter winogradskyi Nb-255 zinc-binding protein YP_316895.1 310827 R 323098 CDS YP_316896.1 75674475 3676183 complement(310999..311622) 1 NC_007406.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 311622 maf 3676183 maf Nitrobacter winogradskyi Nb-255 Maf-like protein YP_316896.1 310999 R 323098 CDS YP_316897.1 75674476 3676184 311913..313109 1 NC_007406.1 hypothetical protein 313109 3676184 Nwi_0278 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316897.1 311913 D 323098 CDS YP_316898.1 75674477 3676185 313329..314516 1 NC_007406.1 thiolase 314516 3676185 Nwi_0279 Nitrobacter winogradskyi Nb-255 thiolase YP_316898.1 313329 D 323098 CDS YP_316899.1 75674478 3676186 complement(314644..315042) 1 NC_007406.1 hypothetical protein 315042 3676186 Nwi_0280 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316899.1 314644 R 323098 CDS YP_316900.1 75674479 3675018 315223..316782 1 NC_007406.1 glycerol kinase 316782 3675018 Nwi_0281 Nitrobacter winogradskyi Nb-255 glycerol kinase YP_316900.1 315223 D 323098 CDS YP_316901.1 75674480 3677110 complement(316829..317254) 1 NC_007406.1 transcriptional regulator 317254 3677110 Nwi_0282 Nitrobacter winogradskyi Nb-255 transcriptional regulator YP_316901.1 316829 R 323098 CDS YP_316902.1 75674481 3677111 complement(317257..321129) 1 NC_007406.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 321129 metH 3677111 metH Nitrobacter winogradskyi Nb-255 B12-dependent methionine synthase YP_316902.1 317257 R 323098 CDS YP_316903.1 75674482 3677112 complement(321190..322221) 1 NC_007406.1 5,10-methylenetetrahydrofolate reductase 322221 3677112 Nwi_0284 Nitrobacter winogradskyi Nb-255 5,10-methylenetetrahydrofolate reductase YP_316903.1 321190 R 323098 CDS YP_316904.1 75674483 3677113 complement(322432..323292) 1 NC_007406.1 catalyzes the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; prephenate dehydratase 323292 3677113 Nwi_0285 Nitrobacter winogradskyi Nb-255 prephenate dehydratase YP_316904.1 322432 R 323098 CDS YP_316905.1 75674484 3677114 complement(323304..324068) 1 NC_007406.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 324068 3677114 Nwi_0286 Nitrobacter winogradskyi Nb-255 3-deoxy-manno-octulosonate cytidylyltransferase YP_316905.1 323304 R 323098 CDS YP_316906.1 75674485 3677115 324262..324819 1 NC_007406.1 cytochrome c, class I 324819 3677115 Nwi_0287 Nitrobacter winogradskyi Nb-255 cytochrome c, class I YP_316906.1 324262 D 323098 CDS YP_316907.1 75674486 3677116 325344..327239 1 NC_007406.1 extracellular solute-binding protein 327239 3677116 Nwi_0288 Nitrobacter winogradskyi Nb-255 extracellular solute-binding protein YP_316907.1 325344 D 323098 CDS YP_316908.1 75674487 3677117 327254..329152 1 NC_007406.1 extracellular solute-binding protein 329152 3677117 Nwi_0289 Nitrobacter winogradskyi Nb-255 extracellular solute-binding protein YP_316908.1 327254 D 323098 CDS YP_316909.1 75674488 3677118 329155..330264 1 NC_007406.1 binding-protein dependent transport system inner membrane protein 330264 3677118 Nwi_0290 Nitrobacter winogradskyi Nb-255 binding-protein dependent transport system inner membrane protein YP_316909.1 329155 D 323098 CDS YP_316910.1 75674489 3677119 330270..331442 1 NC_007406.1 binding-protein dependent transport system inner membrane protein 331442 3677119 Nwi_0291 Nitrobacter winogradskyi Nb-255 binding-protein dependent transport system inner membrane protein YP_316910.1 330270 D 323098 CDS YP_316911.1 75674490 3677120 331452..333089 1 NC_007406.1 ABC transporter ATPase 333089 3677120 Nwi_0292 Nitrobacter winogradskyi Nb-255 ABC transporter ATPase YP_316911.1 331452 D 323098 CDS YP_316912.1 75674491 3677121 complement(333090..333935) 1 NC_007406.1 cell wall-associated hydrolase 333935 3677121 Nwi_0293 Nitrobacter winogradskyi Nb-255 cell wall-associated hydrolase YP_316912.1 333090 R 323098 CDS YP_316913.1 75674492 3677122 complement(333928..335316) 1 NC_007406.1 peptidase M17, leucyl aminopeptidase 335316 3677122 Nwi_0294 Nitrobacter winogradskyi Nb-255 peptidase M17, leucyl aminopeptidase YP_316913.1 333928 R 323098 CDS YP_316914.1 75674493 3677123 335445..336317 1 NC_007406.1 TPR repeat-containing protein 336317 3677123 Nwi_0295 Nitrobacter winogradskyi Nb-255 TPR repeat-containing protein YP_316914.1 335445 D 323098 CDS YP_316915.1 75674494 3677124 complement(336475..337452) 1 NC_007406.1 type II secretion system protein 337452 3677124 Nwi_0296 Nitrobacter winogradskyi Nb-255 type II secretion system protein YP_316915.1 336475 R 323098 CDS YP_316916.1 75674495 3677125 complement(337465..338439) 1 NC_007406.1 type II secretion system protein 338439 3677125 Nwi_0297 Nitrobacter winogradskyi Nb-255 type II secretion system protein YP_316916.1 337465 R 323098 CDS YP_316917.1 75674496 3677126 complement(338452..339918) 1 NC_007406.1 type II secretion system protein E 339918 3677126 Nwi_0298 Nitrobacter winogradskyi Nb-255 type II secretion system protein E YP_316917.1 338452 R 323098 CDS YP_316918.1 75674497 3677127 complement(340175..341440) 1 NC_007406.1 pilus assembly protein cpaE 341440 3677127 Nwi_0299 Nitrobacter winogradskyi Nb-255 pilus assembly protein cpaE YP_316918.1 340175 R 323098 CDS YP_316919.1 75674498 3677128 complement(341437..342177) 1 NC_007406.1 pilus assembly protein CpaD 342177 3677128 Nwi_0300 Nitrobacter winogradskyi Nb-255 pilus assembly protein CpaD YP_316919.1 341437 R 323098 CDS YP_316920.1 75674499 3676130 complement(342198..343679) 1 NC_007406.1 type II and III secretion system protein 343679 3676130 Nwi_0301 Nitrobacter winogradskyi Nb-255 type II and III secretion system protein YP_316920.1 342198 R 323098 CDS YP_316921.1 75674500 3676131 complement(343695..344522) 1 NC_007406.1 Flp pilus assembly CpaB 344522 3676131 Nwi_0302 Nitrobacter winogradskyi Nb-255 Flp pilus assembly CpaB YP_316921.1 343695 R 323098 CDS YP_316922.1 75674501 3676132 complement(344602..345126) 1 NC_007406.1 peptidase A24A, prepilin type IV 345126 3676132 Nwi_0303 Nitrobacter winogradskyi Nb-255 peptidase A24A, prepilin type IV YP_316922.1 344602 R 323098 CDS YP_316923.1 75674502 3676133 complement(345462..345629) 1 NC_007406.1 Flp/Fap pilin component 345629 3676133 Nwi_0304 Nitrobacter winogradskyi Nb-255 Flp/Fap pilin component YP_316923.1 345462 R 323098 CDS YP_316924.1 75674503 3676134 346034..346525 1 NC_007406.1 hypothetical protein 346525 3676134 Nwi_0305 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316924.1 346034 D 323098 CDS YP_316925.1 75674504 3676135 346707..347267 1 NC_007406.1 Flp pilus assembly protein TadG 347267 3676135 Nwi_0306 Nitrobacter winogradskyi Nb-255 Flp pilus assembly protein TadG YP_316925.1 346707 D 323098 CDS YP_316926.1 75674505 3676136 347295..348023 1 NC_007406.1 Flp pilus assembly protein TadG 348023 3676136 Nwi_0307 Nitrobacter winogradskyi Nb-255 Flp pilus assembly protein TadG YP_316926.1 347295 D 323098 CDS YP_316927.1 75674506 3676137 complement(348165..349115) 1 NC_007406.1 integrase, catalytic region 349115 3676137 Nwi_0308 Nitrobacter winogradskyi Nb-255 integrase, catalytic region YP_316927.1 348165 R 323098 CDS YP_316928.1 75674507 3676138 349248..349613 1 NC_007406.1 ISBm1, transposase orfA 349613 3676138 Nwi_0309 Nitrobacter winogradskyi Nb-255 ISBm1, transposase orfA YP_316928.1 349248 D 323098 CDS YP_316929.1 75674508 3676139 349385..350017 1 NC_007406.1 transposase, IS4 350017 3676139 Nwi_0310 Nitrobacter winogradskyi Nb-255 transposase, IS4 YP_316929.1 349385 D 323098 CDS YP_316930.1 75674509 3676140 complement(350232..350438) 1 NC_007406.1 cold-shock protein, DNA-binding 350438 3676140 Nwi_0311 Nitrobacter winogradskyi Nb-255 cold-shock protein, DNA-binding YP_316930.1 350232 R 323098 CDS YP_316931.1 75674510 3676141 complement(350696..350977) 1 NC_007406.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 350977 infA 3676141 infA Nitrobacter winogradskyi Nb-255 translation initiation factor IF-1 YP_316931.1 350696 R 323098 CDS YP_316932.1 75674511 3676142 351118..351360 1 NC_007406.1 hypothetical protein 351360 3676142 Nwi_0313 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316932.1 351118 D 323098 CDS YP_316933.1 75674512 3676143 complement(351424..352854) 1 NC_007406.1 DEAD/DEAH box helicase 352854 3676143 Nwi_0314 Nitrobacter winogradskyi Nb-255 DEAD/DEAH box helicase YP_316933.1 351424 R 323098 CDS YP_316934.1 75674513 3676144 complement(353099..353893) 1 NC_007406.1 pseudouridine synthase 353893 3676144 Nwi_0315 Nitrobacter winogradskyi Nb-255 pseudouridine synthase YP_316934.1 353099 R 323098 CDS YP_316935.1 75674514 3676145 353924..354871 1 NC_007406.1 cell division transporter substrate-binding protein FtsY 354871 3676145 Nwi_0316 Nitrobacter winogradskyi Nb-255 cell division transporter substrate-binding protein FtsY YP_316935.1 353924 D 323098 CDS YP_316936.2 162139851 3676146 354982..355584 1 NC_007406.1 Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 355584 3676146 Nwi_0317 Nitrobacter winogradskyi Nb-255 intracellular septation protein A YP_316936.2 354982 D 323098 CDS YP_316937.1 75674516 3676147 complement(355631..356224) 1 NC_007406.1 periplasmic protein thiol-disulfide oxidoreductase DsbE 356224 3676147 Nwi_0318 Nitrobacter winogradskyi Nb-255 periplasmic protein thiol-disulfide oxidoreductase DsbE YP_316937.1 355631 R 323098 CDS YP_316938.1 75674517 3676148 complement(356221..356400) 1 NC_007406.1 Heme exporter protein CcmD 356400 3676148 Nwi_0319 Nitrobacter winogradskyi Nb-255 Heme exporter protein CcmD YP_316938.1 356221 R 323098 CDS YP_316939.1 75674518 3676149 complement(356406..357137) 1 NC_007406.1 cytochrome c-type biogenesis protein CcmC 357137 3676149 Nwi_0320 Nitrobacter winogradskyi Nb-255 cytochrome c-type biogenesis protein CcmC YP_316939.1 356406 R 323098 CDS YP_316940.1 75674519 3676150 complement(357233..357901) 1 NC_007406.1 cytochrome c-type biogenesis protein CcmB 357901 3676150 Nwi_0321 Nitrobacter winogradskyi Nb-255 cytochrome c-type biogenesis protein CcmB YP_316940.1 357233 R 323098 CDS YP_316941.1 75674520 3676151 complement(357975..358577) 1 NC_007406.1 ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 358577 3676151 Nwi_0322 Nitrobacter winogradskyi Nb-255 cytochrome c biogenesis protein CcmA YP_316941.1 357975 R 323098 CDS YP_316942.1 75674521 3676152 358803..361520 1 NC_007406.1 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 361520 3676152 Nwi_0323 Nitrobacter winogradskyi Nb-255 aconitate hydratase YP_316942.1 358803 D 323098 CDS YP_316943.1 75674522 3676153 361704..362540 1 NC_007406.1 hypothetical protein 362540 3676153 Nwi_0324 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316943.1 361704 D 323098 CDS YP_316944.1 75674523 3676154 362968..363339 1 NC_007406.1 hypothetical protein 363339 3676154 Nwi_0325 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316944.1 362968 D 323098 CDS YP_316945.1 75674524 3676155 complement(363439..364506) 1 NC_007406.1 group 1 glycosyl transferase 364506 3676155 Nwi_0326 Nitrobacter winogradskyi Nb-255 group 1 glycosyl transferase YP_316945.1 363439 R 323098 CDS YP_316946.1 75674525 3676156 364797..366560 1 NC_007406.1 ABC transporter transmembrane region 366560 3676156 Nwi_0327 Nitrobacter winogradskyi Nb-255 ABC transporter transmembrane region YP_316946.1 364797 D 323098 CDS YP_316947.1 75674526 3676157 366628..368829 1 NC_007406.1 amylo-alpha-1,6-glucosidase 368829 3676157 Nwi_0328 Nitrobacter winogradskyi Nb-255 amylo-alpha-1,6-glucosidase YP_316947.1 366628 D 323098 CDS YP_316948.1 75674527 3676158 complement(369511..371535) 1 NC_007406.1 carbohydrate-selective porin OprB 371535 3676158 Nwi_0329 Nitrobacter winogradskyi Nb-255 carbohydrate-selective porin OprB YP_316948.1 369511 R 323098 CDS YP_316949.1 75674528 3676159 complement(371764..372582) 1 NC_007406.1 creatininase 372582 3676159 Nwi_0330 Nitrobacter winogradskyi Nb-255 creatininase YP_316949.1 371764 R 323098 CDS YP_316950.1 75674529 3676160 372722..373756 1 NC_007406.1 perplasmic binding protein of ABC transporter 373756 3676160 Nwi_0331 Nitrobacter winogradskyi Nb-255 perplasmic binding protein of ABC transporter YP_316950.1 372722 D 323098 CDS YP_316951.1 75674530 3676161 373772..374575 1 NC_007406.1 ABC transporter ATPase 374575 3676161 Nwi_0332 Nitrobacter winogradskyi Nb-255 ABC transporter ATPase YP_316951.1 373772 D 323098 CDS YP_316952.1 75674531 3676162 374572..375408 1 NC_007406.1 binding-protein dependent transport system inner membrane protein 375408 3676162 Nwi_0333 Nitrobacter winogradskyi Nb-255 binding-protein dependent transport system inner membrane protein YP_316952.1 374572 D 323098 CDS YP_316953.1 75674532 3676163 375405..376145 1 NC_007406.1 hypothetical protein 376145 3676163 Nwi_0334 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316953.1 375405 D 323098 CDS YP_316954.1 75674533 3676164 complement(376215..376925) 1 NC_007406.1 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 376925 radC 3676164 radC Nitrobacter winogradskyi Nb-255 DNA repair protein RadC YP_316954.1 376215 R 323098 CDS YP_316955.1 75674534 3676165 complement(377225..378040) 1 NC_007406.1 peptidase M24A 378040 3676165 Nwi_0336 Nitrobacter winogradskyi Nb-255 peptidase M24A YP_316955.1 377225 R 323098 CDS YP_316956.1 75674535 3676166 378252..380045 1 NC_007406.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; potassium/proton antiporter 380045 3676166 Nwi_0337 Nitrobacter winogradskyi Nb-255 potassium/proton antiporter YP_316956.1 378252 D 323098 CDS YP_316957.1 75674536 3676167 complement(380066..380731) 1 NC_007406.1 molybdate ABC transporter ATP-binding protein 380731 3676167 Nwi_0338 Nitrobacter winogradskyi Nb-255 molybdate ABC transporter ATP-binding protein YP_316957.1 380066 R 323098 CDS YP_316958.1 75674537 3676168 complement(380734..381495) 1 NC_007406.1 part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; molybdate ABC transporter permease 381495 modB 3676168 modB Nitrobacter winogradskyi Nb-255 molybdate ABC transporter permease YP_316958.1 380734 R 323098 CDS YP_316959.1 75674538 3674894 complement(381599..382423) 1 NC_007406.1 molybdenum ABC transporter periplasmic binding protein 382423 3674894 Nwi_0340 Nitrobacter winogradskyi Nb-255 molybdenum ABC transporter periplasmic binding protein YP_316959.1 381599 R 323098 CDS YP_316960.1 75674539 3674895 complement(382614..383666) 1 NC_007406.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase 383666 mepA 3674895 mepA Nitrobacter winogradskyi Nb-255 penicillin-insensitive murein endopeptidase YP_316960.1 382614 R 323098 CDS YP_316961.1 75674540 3674896 complement(383703..384041) 1 NC_007406.1 hypothetical protein 384041 3674896 Nwi_0342 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316961.1 383703 R 323098 CDS YP_316962.1 75674541 3674897 complement(384138..385949) 1 NC_007406.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 385949 3674897 Nwi_0343 Nitrobacter winogradskyi Nb-255 GTP-binding protein LepA YP_316962.1 384138 R 323098 CDS YP_316963.1 75674542 3674898 complement(386045..386374) 1 NC_007406.1 phosphoryl transfer system, HPr 386374 3674898 Nwi_0344 Nitrobacter winogradskyi Nb-255 phosphoryl transfer system, HPr YP_316963.1 386045 R 323098 CDS YP_316964.1 75674543 3674899 complement(386371..386772) 1 NC_007406.1 PTS system fructose subfamily transporter subunit IIA 386772 3674899 Nwi_0345 Nitrobacter winogradskyi Nb-255 PTS system fructose subfamily transporter subunit IIA YP_316964.1 386371 R 323098 CDS YP_316965.1 75674544 3674900 complement(386925..387434) 1 NC_007406.1 hypothetical protein 387434 3674900 Nwi_0346 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316965.1 386925 R 323098 CDS YP_316966.1 75674545 3674901 complement(387431..389266) 1 NC_007406.1 Signal transduction histidine kinase 389266 3674901 Nwi_0347 Nitrobacter winogradskyi Nb-255 Signal transduction histidine kinase YP_316966.1 387431 R 323098 CDS YP_316967.1 75674546 3674902 complement(389429..390130) 1 NC_007406.1 transcriptional regulatory protein 390130 3674902 Nwi_0348 Nitrobacter winogradskyi Nb-255 transcriptional regulatory protein YP_316967.1 389429 R 323098 CDS YP_316968.1 75674547 3674903 390352..391089 1 NC_007406.1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 391089 3674903 Nwi_0349 Nitrobacter winogradskyi Nb-255 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_316968.1 390352 D 323098 CDS YP_316969.1 75674548 3674904 391235..392851 1 NC_007406.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 392851 3674904 Nwi_0350 Nitrobacter winogradskyi Nb-255 phosphoenolpyruvate carboxykinase YP_316969.1 391235 D 323098 CDS YP_316970.1 75674549 3674905 392871..393761 1 NC_007406.1 beta-lactamase 393761 3674905 Nwi_0351 Nitrobacter winogradskyi Nb-255 beta-lactamase YP_316970.1 392871 D 323098 CDS YP_316971.1 75674550 3674906 complement(393742..394737) 1 NC_007406.1 arginase 394737 3674906 Nwi_0352 Nitrobacter winogradskyi Nb-255 arginase YP_316971.1 393742 R 323098 CDS YP_316972.1 75674551 3674907 complement(394743..397484) 1 NC_007406.1 catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; ATP-dependent DNA ligase 397484 ligD 3674907 ligD Nitrobacter winogradskyi Nb-255 ATP-dependent DNA ligase YP_316972.1 394743 R 323098 CDS YP_316973.1 75674552 3674908 complement(397534..397719) 1 NC_007406.1 hypothetical protein 397719 3674908 Nwi_0354 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316973.1 397534 R 323098 CDS YP_316974.1 75674553 3674909 complement(397732..398715) 1 NC_007406.1 hypothetical protein 398715 3674909 Nwi_0355 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316974.1 397732 R 323098 CDS YP_316975.1 75674554 3674910 complement(398861..399472) 1 NC_007406.1 lysine exporter protein LysE/YggA 399472 3674910 Nwi_0356 Nitrobacter winogradskyi Nb-255 lysine exporter protein LysE/YggA YP_316975.1 398861 R 323098 CDS YP_316976.1 75674555 3674911 complement(399513..402545) 1 NC_007406.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 402545 3674911 Nwi_0357 Nitrobacter winogradskyi Nb-255 DNA polymerase I YP_316976.1 399513 R 323098 CDS YP_316977.1 75674556 3674912 complement(402648..403760) 1 NC_007406.1 acyltransferase 403760 3674912 Nwi_0358 Nitrobacter winogradskyi Nb-255 acyltransferase YP_316977.1 402648 R 323098 CDS YP_316978.1 75674557 3674913 403840..406458 1 NC_007406.1 ATP-dependent helicase HrpB 406458 3674913 Nwi_0359 Nitrobacter winogradskyi Nb-255 ATP-dependent helicase HrpB YP_316978.1 403840 D 323098 CDS YP_316979.1 75674558 3674914 406806..407333 1 NC_007406.1 hypothetical protein 407333 3674914 Nwi_0360 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316979.1 406806 D 323098 CDS YP_316980.1 75674559 3674915 407589..409088 1 NC_007406.1 phosphoglucomutase/phosphomannomutase 409088 3674915 Nwi_0361 Nitrobacter winogradskyi Nb-255 phosphoglucomutase/phosphomannomutase YP_316980.1 407589 D 323098 CDS YP_316981.1 75674560 3674916 complement(409135..409644) 1 NC_007406.1 AsnC family transcriptional regulator 409644 3674916 Nwi_0362 Nitrobacter winogradskyi Nb-255 AsnC family transcriptional regulator YP_316981.1 409135 R 323098 CDS YP_316982.1 75674561 3674917 complement(409866..410507) 1 NC_007406.1 ISRm2011-2 transposase 410507 3674917 Nwi_0363 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_316982.1 409866 R 323098 CDS YP_316983.1 75674562 3674918 complement(410459..410809) 1 NC_007406.1 transposase 410809 3674918 Nwi_0364 Nitrobacter winogradskyi Nb-255 transposase YP_316983.1 410459 R 323098 CDS YP_316984.1 75674563 3674919 411072..411437 1 NC_007406.1 ISBm1, transposase orfA 411437 3674919 Nwi_0365 Nitrobacter winogradskyi Nb-255 ISBm1, transposase orfA YP_316984.1 411072 D 323098 CDS YP_316985.1 75674564 3674920 complement(411800..412789) 1 NC_007406.1 integrase, catalytic region 412789 3674920 Nwi_0366 Nitrobacter winogradskyi Nb-255 integrase, catalytic region YP_316985.1 411800 R 323098 CDS YP_316986.1 75674565 3674921 complement(412847..413452) 1 NC_007406.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 413452 recR 3674921 recR Nitrobacter winogradskyi Nb-255 recombination protein RecR YP_316986.1 412847 R 323098 CDS YP_316987.1 75674566 3674922 complement(413603..413923) 1 NC_007406.1 hypothetical protein 413923 3674922 Nwi_0368 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316987.1 413603 R 323098 CDS YP_316988.1 75674567 3674923 complement(414108..415943) 1 NC_007406.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 415943 3674923 Nwi_0369 Nitrobacter winogradskyi Nb-255 DNA polymerase III subunits gamma and tau YP_316988.1 414108 R 323098 CDS YP_316989.1 75674568 3674925 416308..416724 1 NC_007406.1 histidine triad (HIT) protein 416724 3674925 Nwi_0370 Nitrobacter winogradskyi Nb-255 histidine triad (HIT) protein YP_316989.1 416308 D 323098 CDS YP_316990.1 75674569 3674926 complement(416882..417133) 1 NC_007406.1 hypothetical protein 417133 3674926 Nwi_0371 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316990.1 416882 R 323098 CDS YP_316991.1 75674570 3674415 complement(417304..417711) 1 NC_007406.1 hypothetical protein 417711 3674415 Nwi_0372 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316991.1 417304 R 323098 CDS YP_316992.1 75674571 3676958 complement(417727..418494) 1 NC_007406.1 beta-lactamase-like protein 418494 3676958 Nwi_0373 Nitrobacter winogradskyi Nb-255 beta-lactamase-like protein YP_316992.1 417727 R 323098 CDS YP_316993.1 75674572 3676959 418825..419565 1 NC_007406.1 hypothetical protein 419565 3676959 Nwi_0374 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316993.1 418825 D 323098 CDS YP_316994.1 75674573 3676960 complement(419607..420302) 1 NC_007406.1 hypothetical protein 420302 3676960 Nwi_0375 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316994.1 419607 R 323098 CDS YP_316995.1 75674574 3676961 complement(420976..421872) 1 NC_007406.1 modification methylase HemK 421872 3676961 Nwi_0376 Nitrobacter winogradskyi Nb-255 modification methylase HemK YP_316995.1 420976 R 323098 CDS YP_316996.1 75674575 3676962 complement(421944..423020) 1 NC_007406.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 423020 prfA 3676962 prfA Nitrobacter winogradskyi Nb-255 peptide chain release factor 1 YP_316996.1 421944 R 323098 CDS YP_316997.1 75674576 3676963 complement(423105..425372) 1 NC_007406.1 phosphoenolpyruvate-protein phosphotransferase 425372 3676963 Nwi_0378 Nitrobacter winogradskyi Nb-255 phosphoenolpyruvate-protein phosphotransferase YP_316997.1 423105 R 323098 CDS YP_316998.1 75674577 3676964 complement(425768..427021) 1 NC_007406.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 427021 3676964 Nwi_0379 Nitrobacter winogradskyi Nb-255 aspartate kinase YP_316998.1 425768 R 323098 CDS YP_316999.1 75674578 3676965 427081..427398 1 NC_007406.1 hypothetical protein 427398 3676965 Nwi_0380 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_316999.1 427081 D 323098 CDS YP_317000.1 75674579 3676966 427444..428229 1 NC_007406.1 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 428229 3676966 Nwi_0381 Nitrobacter winogradskyi Nb-255 3-demethylubiquinone-9 3-methyltransferase YP_317000.1 427444 D 323098 CDS YP_317001.1 75674580 3676967 complement(428259..428702) 1 NC_007406.1 hypothetical protein 428702 3676967 Nwi_0382 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317001.1 428259 R 323098 CDS YP_317002.1 75674581 3676968 complement(428699..428944) 1 NC_007406.1 hypothetical protein 428944 3676968 Nwi_0383 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317002.1 428699 R 323098 CDS YP_317003.1 75674582 3676969 complement(428941..429843) 1 NC_007406.1 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 429843 3676969 Nwi_0384 Nitrobacter winogradskyi Nb-255 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_317003.1 428941 R 323098 CDS YP_317004.1 75674583 3676970 complement(429875..430690) 1 NC_007406.1 phosphoribosyltransferase 430690 3676970 Nwi_0385 Nitrobacter winogradskyi Nb-255 phosphoribosyltransferase YP_317004.1 429875 R 323098 CDS YP_317005.1 75674584 3676971 430779..431648 1 NC_007406.1 methyltransferase 431648 3676971 Nwi_0386 Nitrobacter winogradskyi Nb-255 methyltransferase YP_317005.1 430779 D 323098 CDS YP_317006.1 75674585 3676972 complement(431778..432167) 1 NC_007406.1 NUDIX hydrolase 432167 3676972 Nwi_0387 Nitrobacter winogradskyi Nb-255 NUDIX hydrolase YP_317006.1 431778 R 323098 CDS YP_317007.1 75674586 3676973 complement(432176..433429) 1 NC_007406.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 433429 argJ 3676973 argJ Nitrobacter winogradskyi Nb-255 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase YP_317007.1 432176 R 323098 CDS YP_317008.1 75674587 3676974 complement(433517..434422) 1 NC_007406.1 PpiC-type peptidyl-prolyl cis-trans isomerase 434422 3676974 Nwi_0389 Nitrobacter winogradskyi Nb-255 PpiC-type peptidyl-prolyl cis-trans isomerase YP_317008.1 433517 R 323098 CDS YP_317009.1 75674588 3676975 435057..437918 1 NC_007406.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 437918 3676975 Nwi_0390 Nitrobacter winogradskyi Nb-255 preprotein translocase subunit SecA YP_317009.1 435057 D 323098 CDS YP_317010.1 75674589 3676976 complement(438142..439620) 1 NC_007406.1 hypothetical protein 439620 3676976 Nwi_0391 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317010.1 438142 R 323098 CDS YP_317011.1 75674590 3676977 complement(439944..440906) 1 NC_007406.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 440906 3676977 Nwi_0392 Nitrobacter winogradskyi Nb-255 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_317011.1 439944 R 323098 CDS YP_317012.1 75674591 3676978 complement(441142..442101) 1 NC_007406.1 tyrosine recombinase XerD 442101 3676978 Nwi_0393 Nitrobacter winogradskyi Nb-255 tyrosine recombinase XerD YP_317012.1 441142 R 323098 CDS YP_317013.1 75674592 3676979 complement(442217..442363) 1 NC_007406.1 hypothetical protein 442363 3676979 Nwi_0394 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317013.1 442217 R 323098 CDS YP_317014.1 75674593 3676980 442655..443299 1 NC_007406.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 443299 3676980 Nwi_0395 Nitrobacter winogradskyi Nb-255 shikimate kinase YP_317014.1 442655 D 323098 CDS YP_317015.1 75674594 3676981 443296..444447 1 NC_007406.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 444447 aroB 3676981 aroB Nitrobacter winogradskyi Nb-255 3-dehydroquinate synthase YP_317015.1 443296 D 323098 CDS YP_317016.1 75674595 3676982 444451..445800 1 NC_007406.1 Mg2+ and Co2+ transporter CorB family 445800 3676982 Nwi_0397 Nitrobacter winogradskyi Nb-255 Mg2+ and Co2+ transporter CorB family YP_317016.1 444451 D 323098 CDS YP_317017.1 75674596 3676983 complement(445929..446246) 1 NC_007406.1 hypothetical protein 446246 3676983 Nwi_0398 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317017.1 445929 R 323098 CDS YP_317018.1 75674597 3676984 complement(446250..447383) 1 NC_007406.1 hypothetical protein 447383 3676984 Nwi_0399 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317018.1 446250 R 323098 CDS YP_317019.1 75674598 3676985 complement(447662..447937) 1 NC_007406.1 BolA-like protein 447937 3676985 Nwi_0400 Nitrobacter winogradskyi Nb-255 BolA-like protein YP_317019.1 447662 R 323098 CDS YP_317020.1 75674599 3676986 447999..448697 1 NC_007406.1 molecular chaperone DnaJ 448697 3676986 Nwi_0401 Nitrobacter winogradskyi Nb-255 molecular chaperone DnaJ YP_317020.1 447999 D 323098 CDS YP_317021.1 75674600 3676987 complement(448737..449060) 1 NC_007406.1 hypothetical protein 449060 3676987 Nwi_0402 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317021.1 448737 R 323098 CDS YP_317022.1 75674601 3676988 449482..450480 1 NC_007406.1 cobalt chelatase small subunit 450480 3676988 Nwi_0403 Nitrobacter winogradskyi Nb-255 cobalt chelatase small subunit YP_317022.1 449482 D 323098 CDS YP_317023.1 75674602 3676989 450614..452521 1 NC_007406.1 cobalt chelatase subunit CobT 452521 3676989 Nwi_0404 Nitrobacter winogradskyi Nb-255 cobalt chelatase subunit CobT YP_317023.1 450614 D 323098 CDS YP_317024.1 75674603 3676990 452602..453672 1 NC_007406.1 hypothetical protein 453672 3676990 Nwi_0405 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317024.1 452602 D 323098 CDS YP_317025.1 75674604 3676991 complement(453944..454237) 1 NC_007406.1 required for 70S ribosome assembly; 50S ribosomal protein L28 454237 rpmB 3676991 rpmB Nitrobacter winogradskyi Nb-255 50S ribosomal protein L28 YP_317025.1 453944 R 323098 CDS YP_317026.1 75674605 3676992 454546..455415 1 NC_007406.1 hypothetical protein 455415 3676992 Nwi_0407 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317026.1 454546 D 323098 CDS YP_317027.1 75674606 3676993 complement(455482..455796) 1 NC_007406.1 hypothetical protein 455796 3676993 Nwi_0408 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317027.1 455482 R 323098 CDS YP_317028.1 75674607 3676994 455942..459316 1 NC_007406.1 helicase 459316 3676994 Nwi_0409 Nitrobacter winogradskyi Nb-255 helicase YP_317028.1 455942 D 323098 CDS YP_317029.1 75674608 3676995 459432..459725 1 NC_007406.1 RNA-binding protein S4 459725 3676995 Nwi_0410 Nitrobacter winogradskyi Nb-255 RNA-binding protein S4 YP_317029.1 459432 D 323098 CDS YP_317030.1 75674609 3676996 459938..460276 1 NC_007406.1 4Fe-4S ferredoxin 460276 3676996 Nwi_0411 Nitrobacter winogradskyi Nb-255 4Fe-4S ferredoxin YP_317030.1 459938 D 323098 CDS YP_317031.1 75674610 3676997 460680..461531 1 NC_007406.1 transcription factor CarD 461531 3676997 Nwi_0412 Nitrobacter winogradskyi Nb-255 transcription factor CarD YP_317031.1 460680 D 323098 CDS YP_317032.1 75674611 3676998 complement(462543..463334) 1 NC_007406.1 hypothetical protein 463334 3676998 Nwi_0413 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317032.1 462543 R 323098 CDS YP_317033.1 75674612 3676999 complement(463631..466186) 1 NC_007406.1 hypothetical protein 466186 3676999 Nwi_0414 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317033.1 463631 R 323098 CDS YP_317034.1 75674613 3677000 complement(466263..466985) 1 NC_007406.1 ABC transporter ATPase 466985 3677000 Nwi_0415 Nitrobacter winogradskyi Nb-255 ABC transporter ATPase YP_317034.1 466263 R 323098 CDS YP_317035.1 75674614 3677003 467056..467811 1 NC_007406.1 lysophospholipase L1 and related esterase 467811 3677003 Nwi_0416 Nitrobacter winogradskyi Nb-255 lysophospholipase L1 and related esterase YP_317035.1 467056 D 323098 CDS YP_317036.1 75674615 3677004 467986..468522 1 NC_007406.1 2'-5' RNA ligase 468522 3677004 Nwi_0417 Nitrobacter winogradskyi Nb-255 2'-5' RNA ligase YP_317036.1 467986 D 323098 CDS YP_317037.1 75674616 3677005 468593..469777 1 NC_007406.1 AFG1-like ATPase 469777 3677005 Nwi_0418 Nitrobacter winogradskyi Nb-255 AFG1-like ATPase YP_317037.1 468593 D 323098 CDS YP_317038.1 75674617 3677006 469971..470939 1 NC_007406.1 Catalyzes the reversible oxidation of malate to oxaloacetate; malate dehydrogenase 470939 3677006 Nwi_0419 Nitrobacter winogradskyi Nb-255 malate dehydrogenase YP_317038.1 469971 D 323098 CDS YP_317039.1 75674618 3677007 471095..472294 1 NC_007406.1 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 472294 sucC 3677007 sucC Nitrobacter winogradskyi Nb-255 succinyl-CoA synthetase subunit beta YP_317039.1 471095 D 323098 CDS YP_317040.1 75674619 3677008 472294..473178 1 NC_007406.1 succinyl-CoA ligase subunit alpha 473178 3677008 Nwi_0421 Nitrobacter winogradskyi Nb-255 succinyl-CoA ligase subunit alpha YP_317040.1 472294 D 323098 CDS YP_317041.1 75674620 3675058 473328..476285 1 NC_007406.1 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 component 476285 sucA 3675058 sucA Nitrobacter winogradskyi Nb-255 2-oxoglutarate dehydrogenase E1 component YP_317041.1 473328 D 323098 CDS YP_317042.1 75674621 3676597 476388..477662 1 NC_007406.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 477662 3676597 Nwi_0423 Nitrobacter winogradskyi Nb-255 dihydrolipoamide succinyltransferase YP_317042.1 476388 D 323098 CDS YP_317043.1 75674622 3676598 477809..478309 1 NC_007406.1 hypothetical protein 478309 3676598 Nwi_0424 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317043.1 477809 D 323098 CDS YP_317044.1 75674623 3676599 478320..479723 1 NC_007406.1 Catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 479723 3676599 Nwi_0425 Nitrobacter winogradskyi Nb-255 dihydrolipoamide dehydrogenase YP_317044.1 478320 D 323098 CDS YP_317045.1 75674624 3676600 complement(479866..480831) 1 NC_007406.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 480831 xerC 3676600 xerC Nitrobacter winogradskyi Nb-255 site-specific tyrosine recombinase XerC YP_317045.1 479866 R 323098 CDS YP_317046.1 75674625 3676601 480969..483185 1 NC_007406.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 483185 3676601 Nwi_0427 Nitrobacter winogradskyi Nb-255 primosome assembly protein PriA YP_317046.1 480969 D 323098 CDS YP_317047.1 75674626 3676602 complement(483277..483783) 1 NC_007406.1 rare lipoprotein A 483783 3676602 Nwi_0428 Nitrobacter winogradskyi Nb-255 rare lipoprotein A YP_317047.1 483277 R 323098 CDS YP_317048.2 229125527 3676603 484429..484989 1 NC_007406.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta 484989 3676603 Nwi_0429 Nitrobacter winogradskyi Nb-255 ATP synthase F0F1 subunit delta YP_317048.2 484429 D 323098 CDS YP_317049.1 75674628 3676604 484989..486521 1 NC_007406.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 486521 3676604 Nwi_0430 Nitrobacter winogradskyi Nb-255 ATP synthase F0F1 subunit alpha YP_317049.1 484989 D 323098 CDS YP_317050.1 75674629 3676605 486652..487530 1 NC_007406.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; ATP synthase F0F1 subunit gamma 487530 3676605 Nwi_0431 Nitrobacter winogradskyi Nb-255 ATP synthase F0F1 subunit gamma YP_317050.1 486652 D 323098 CDS YP_317051.1 75674630 3676606 487548..487952 1 NC_007406.1 OsmC-like protein 487952 3676606 Nwi_0432 Nitrobacter winogradskyi Nb-255 OsmC-like protein YP_317051.1 487548 D 323098 CDS YP_317052.1 75674631 3676607 487981..489411 1 NC_007406.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 489411 3676607 Nwi_0433 Nitrobacter winogradskyi Nb-255 ATP synthase F0F1 subunit beta YP_317052.1 487981 D 323098 CDS YP_317053.1 75674632 3676608 489516..489923 1 NC_007406.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the epsilon subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit epsilon 489923 atpC 3676608 atpC Nitrobacter winogradskyi Nb-255 ATP synthase F0F1 subunit epsilon YP_317053.1 489516 D 323098 CDS YP_317054.1 75674633 3676609 complement(489937..490467) 1 NC_007406.1 transposase, IS4 490467 3676609 Nwi_0435 Nitrobacter winogradskyi Nb-255 transposase, IS4 YP_317054.1 489937 R 323098 CDS YP_317055.1 75674634 3676610 491004..491744 1 NC_007406.1 hypothetical protein 491744 3676610 Nwi_0436 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317055.1 491004 D 323098 CDS YP_317056.1 75674635 3676611 491726..493513 1 NC_007406.1 hypothetical protein 493513 3676611 Nwi_0437 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317056.1 491726 D 323098 CDS YP_317057.1 75674636 3676613 complement(494699..495826) 1 NC_007406.1 hypothetical protein 495826 3676613 Nwi_0438 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317057.1 494699 R 323098 CDS YP_317058.1 75674637 3676614 496243..496683 1 NC_007406.1 50S ribosomal protein L21 496683 rplU 3676614 rplU Nitrobacter winogradskyi Nb-255 50S ribosomal protein L21 YP_317058.1 496243 D 323098 CDS YP_317059.1 75674638 3676615 496769..497041 1 NC_007406.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 497041 rpmA 3676615 rpmA Nitrobacter winogradskyi Nb-255 50S ribosomal protein L27 YP_317059.1 496769 D 323098 CDS YP_317060.1 75674639 3676616 497178..497786 1 NC_007406.1 N-acetyltransferase 497786 3676616 Nwi_0441 Nitrobacter winogradskyi Nb-255 N-acetyltransferase YP_317060.1 497178 D 323098 CDS YP_317061.1 75674640 3676617 498050..499126 1 NC_007406.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 499126 obgE 3676617 obgE Nitrobacter winogradskyi Nb-255 GTPase ObgE YP_317061.1 498050 D 323098 CDS YP_317062.1 75674641 3676618 499266..500405 1 NC_007406.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 500405 3676618 Nwi_0443 Nitrobacter winogradskyi Nb-255 gamma-glutamyl kinase YP_317062.1 499266 D 323098 CDS YP_317063.1 75674642 3676619 500732..502024 1 NC_007406.1 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 502024 proA 3676619 proA Nitrobacter winogradskyi Nb-255 gamma-glutamyl phosphate reductase YP_317063.1 500732 D 323098 CDS YP_317064.1 75674643 3676620 502064..502696 1 NC_007406.1 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 502696 nadD 3676620 nadD Nitrobacter winogradskyi Nb-255 nicotinic acid mononucleotide adenylyltransferase YP_317064.1 502064 D 323098 CDS YP_317065.1 75674644 3676621 502912..503283 1 NC_007406.1 Iojap-related protein 503283 3676621 Nwi_0446 Nitrobacter winogradskyi Nb-255 Iojap-related protein YP_317065.1 502912 D 323098 CDS YP_317066.1 75674645 3676622 503329..503811 1 NC_007406.1 SPOUT methyltransferase; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 503811 3676622 Nwi_0447 Nitrobacter winogradskyi Nb-255 rRNA large subunit methyltransferase YP_317066.1 503329 D 323098 CDS YP_317067.1 75674646 3676623 503906..505258 1 NC_007406.1 peptidase M23B 505258 3676623 Nwi_0448 Nitrobacter winogradskyi Nb-255 peptidase M23B YP_317067.1 503906 D 323098 CDS YP_317068.1 75674647 3676624 505255..506610 1 NC_007406.1 peptidase S41A 506610 3676624 Nwi_0449 Nitrobacter winogradskyi Nb-255 peptidase S41A YP_317068.1 505255 D 323098 CDS YP_317069.1 75674648 3676625 506762..507964 1 NC_007406.1 hypothetical protein 507964 3676625 Nwi_0450 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317069.1 506762 D 323098 CDS YP_317070.1 75674649 3676626 508093..508605 1 NC_007406.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 508605 3676626 Nwi_0451 Nitrobacter winogradskyi Nb-255 dinucleoside polyphosphate hydrolase YP_317070.1 508093 D 323098 CDS YP_317071.1 75674650 3676693 complement(508789..510279) 1 NC_007406.1 peptidase M48, Ste24p 510279 3676693 Nwi_0452 Nitrobacter winogradskyi Nb-255 peptidase M48, Ste24p YP_317071.1 508789 R 323098 CDS YP_317072.1 75674651 3676694 complement(510544..511323) 1 NC_007406.1 nuclease 511323 3676694 Nwi_0453 Nitrobacter winogradskyi Nb-255 nuclease YP_317072.1 510544 R 323098 CDS YP_317073.1 75674652 3676695 complement(511399..511671) 1 NC_007406.1 hypothetical protein 511671 3676695 Nwi_0454 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317073.1 511399 R 323098 CDS YP_317074.1 75674653 3676696 complement(511866..512444) 1 NC_007406.1 hypothetical protein 512444 3676696 Nwi_0455 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317074.1 511866 R 323098 CDS YP_317075.1 75674654 3676698 complement(512813..513670) 1 NC_007406.1 binding-protein dependent transport system inner membrane protein 513670 3676698 Nwi_0456 Nitrobacter winogradskyi Nb-255 binding-protein dependent transport system inner membrane protein YP_317075.1 512813 R 323098 CDS YP_317076.1 75674655 3676699 complement(513667..514869) 1 NC_007406.1 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 514869 3676699 Nwi_0457 Nitrobacter winogradskyi Nb-255 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein YP_317076.1 513667 R 323098 CDS YP_317077.1 75674656 3676700 complement(514925..515737) 1 NC_007406.1 ABC transporter ATPase 515737 3676700 Nwi_0458 Nitrobacter winogradskyi Nb-255 ABC transporter ATPase YP_317077.1 514925 R 323098 CDS YP_317078.1 75674657 3676701 complement(515734..516837) 1 NC_007406.1 hypothetical protein 516837 3676701 Nwi_0459 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317078.1 515734 R 323098 CDS YP_317079.1 75674658 3676702 complement(516855..517427) 1 NC_007406.1 carboxymuconolactone decarboxylase 517427 3676702 Nwi_0460 Nitrobacter winogradskyi Nb-255 carboxymuconolactone decarboxylase YP_317079.1 516855 R 323098 CDS YP_317080.1 75674659 3676296 517624..518796 1 NC_007406.1 hypothetical protein 518796 3676296 Nwi_0461 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317080.1 517624 D 323098 CDS YP_317081.1 75674660 3676297 518793..520577 1 NC_007406.1 catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; ATP-dependent DNA ligase 520577 3676297 Nwi_0462 Nitrobacter winogradskyi Nb-255 ATP-dependent DNA ligase YP_317081.1 518793 D 323098 CDS YP_317082.1 75674661 3676298 520653..520958 1 NC_007406.1 hypothetical protein 520958 3676298 Nwi_0463 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317082.1 520653 D 323098 CDS YP_317083.1 75674662 3676299 complement(521079..522173) 1 NC_007406.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 522173 3676299 Nwi_0464 Nitrobacter winogradskyi Nb-255 dihydroorotate dehydrogenase 2 YP_317083.1 521079 R 323098 CDS YP_317084.1 75674663 3674866 complement(522170..522514) 1 NC_007406.1 hypothetical protein 522514 3674866 Nwi_0465 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317084.1 522170 R 323098 CDS YP_317085.1 75674664 3674867 522734..523366 1 NC_007406.1 peptidase S24 523366 3674867 Nwi_0466 Nitrobacter winogradskyi Nb-255 peptidase S24 YP_317085.1 522734 D 323098 CDS YP_317086.1 75674665 3674868 complement(523436..525394) 1 NC_007406.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 525394 3674868 Nwi_0467 Nitrobacter winogradskyi Nb-255 acetyl-CoA synthetase YP_317086.1 523436 R 323098 CDS YP_317087.1 75674666 3674869 complement(525555..525968) 1 NC_007406.1 hypothetical protein 525968 3674869 Nwi_0468 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317087.1 525555 R 323098 CDS YP_317088.1 75674667 3676501 complement(525971..526951) 1 NC_007406.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 526951 gpsA 3676501 gpsA Nitrobacter winogradskyi Nb-255 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_317088.1 525971 R 323098 CDS YP_317089.1 75674668 3676502 complement(526966..528039) 1 NC_007406.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 528039 3676502 Nwi_0470 Nitrobacter winogradskyi Nb-255 DNA-binding/iron metalloprotein/AP endonuclease YP_317089.1 526966 R 323098 CDS YP_317090.1 75674669 3676503 528130..529080 1 NC_007406.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 529080 hemC 3676503 hemC Nitrobacter winogradskyi Nb-255 porphobilinogen deaminase YP_317090.1 528130 D 323098 CDS YP_317091.1 75674670 3676504 529085..529831 1 NC_007406.1 uroporphyrinogen III synthase HEM4 529831 3676504 Nwi_0472 Nitrobacter winogradskyi Nb-255 uroporphyrinogen III synthase HEM4 YP_317091.1 529085 D 323098 CDS YP_317092.1 75674671 3676505 529921..531411 1 NC_007406.1 hypothetical protein 531411 3676505 Nwi_0473 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317092.1 529921 D 323098 CDS YP_317093.1 75674672 3676506 531419..533086 1 NC_007406.1 HemY protein 533086 3676506 Nwi_0474 Nitrobacter winogradskyi Nb-255 HemY protein YP_317093.1 531419 D 323098 CDS YP_317094.1 75674673 3676508 533381..533611 1 NC_007406.1 hypothetical protein 533611 3676508 Nwi_0475 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317094.1 533381 D 323098 CDS YP_317095.1 75674674 3676509 533742..534221 1 NC_007406.1 hypothetical protein 534221 3676509 Nwi_0476 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317095.1 533742 D 323098 CDS YP_317096.1 75674675 3676510 534468..535238 1 NC_007406.1 short-chain dehydrogenase/reductase SDR 535238 3676510 Nwi_0477 Nitrobacter winogradskyi Nb-255 short-chain dehydrogenase/reductase SDR YP_317096.1 534468 D 323098 CDS YP_317097.1 75674676 3676512 536100..536390 1 NC_007406.1 hypothetical protein 536390 3676512 Nwi_0478 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317097.1 536100 D 323098 CDS YP_317098.1 75674677 3676513 536402..536722 1 NC_007406.1 hypothetical protein 536722 3676513 Nwi_0479 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317098.1 536402 D 323098 CDS YP_317099.1 75674678 3676514 536741..537625 1 NC_007406.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 537625 3676514 Nwi_0480 Nitrobacter winogradskyi Nb-255 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_317099.1 536741 D 323098 CDS YP_317100.1 75674679 3676515 537860..538810 1 NC_007406.1 integrase, catalytic region 538810 3676515 Nwi_0481 Nitrobacter winogradskyi Nb-255 integrase, catalytic region YP_317100.1 537860 D 323098 CDS YP_317101.1 75674680 3676516 539004..539354 1 NC_007406.1 transposase 539354 3676516 Nwi_0482 Nitrobacter winogradskyi Nb-255 transposase YP_317101.1 539004 D 323098 CDS YP_317102.1 75674681 3676517 539306..539947 1 NC_007406.1 ISRm2011-2 transposase 539947 3676517 Nwi_0483 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_317102.1 539306 D 323098 CDS YP_317103.1 75674682 3676518 complement(539960..540490) 1 NC_007406.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 540490 3676518 Nwi_0484 Nitrobacter winogradskyi Nb-255 inorganic pyrophosphatase YP_317103.1 539960 R 323098 CDS YP_317104.1 75674683 3676519 complement(540766..541317) 1 NC_007406.1 N-acetyltransferase 541317 3676519 Nwi_0485 Nitrobacter winogradskyi Nb-255 N-acetyltransferase YP_317104.1 540766 R 323098 CDS YP_317105.1 75674684 3676520 541358..541675 1 NC_007406.1 hypothetical protein 541675 3676520 Nwi_0486 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317105.1 541358 D 323098 CDS YP_317106.1 75674685 3676521 complement(541660..542433) 1 NC_007406.1 short chain dehydrogenase 542433 3676521 Nwi_0487 Nitrobacter winogradskyi Nb-255 short chain dehydrogenase YP_317106.1 541660 R 323098 CDS YP_317107.1 75674686 3676522 542539..543468 1 NC_007406.1 LysR family transcriptional regulator 543468 3676522 Nwi_0488 Nitrobacter winogradskyi Nb-255 LysR family transcriptional regulator YP_317107.1 542539 D 323098 CDS YP_317108.1 75674687 3676523 complement(543648..545018) 1 NC_007406.1 amine oxidase 545018 3676523 Nwi_0489 Nitrobacter winogradskyi Nb-255 amine oxidase YP_317108.1 543648 R 323098 CDS YP_317109.1 75674688 3676524 complement(545147..547813) 1 NC_007406.1 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 547813 3676524 Nwi_0490 Nitrobacter winogradskyi Nb-255 DNA mismatch repair protein MutS YP_317109.1 545147 R 323098 CDS YP_317110.1 75674689 3676525 complement(548030..548896) 1 NC_007406.1 ubiquinone/menaquinone biosynthesis methylase 548896 3676525 Nwi_0491 Nitrobacter winogradskyi Nb-255 ubiquinone/menaquinone biosynthesis methylase YP_317110.1 548030 R 323098 CDS YP_317111.1 75674690 3676526 548965..549825 1 NC_007406.1 alpha/beta hydrolase 549825 3676526 Nwi_0492 Nitrobacter winogradskyi Nb-255 alpha/beta hydrolase YP_317111.1 548965 D 323098 CDS YP_317112.1 75674691 3676527 550148..550681 1 NC_007406.1 ferric-uptake regulator 550681 3676527 Nwi_0493 Nitrobacter winogradskyi Nb-255 ferric-uptake regulator YP_317112.1 550148 D 323098 CDS YP_317113.1 75674692 3676528 550968..552260 1 NC_007406.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 552260 ispG 3676528 ispG Nitrobacter winogradskyi Nb-255 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_317113.1 550968 D 323098 CDS YP_317114.1 75674693 3674768 complement(552574..553500) 1 NC_007406.1 polyprenyl synthetase 553500 3674768 Nwi_0495 Nitrobacter winogradskyi Nb-255 polyprenyl synthetase YP_317114.1 552574 R 323098 CDS YP_317115.1 75674694 3675497 553729..554409 1 NC_007406.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 554409 mtgA 3675497 mtgA Nitrobacter winogradskyi Nb-255 monofunctional biosynthetic peptidoglycan transglycosylase YP_317115.1 553729 D 323098 CDS YP_317116.1 75674695 3675498 554512..554697 1 NC_007406.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 554697 rpmF 3675498 rpmF Nitrobacter winogradskyi Nb-255 50S ribosomal protein L32 YP_317116.1 554512 D 323098 CDS YP_317117.1 75674696 3675499 554819..555466 1 NC_007406.1 hypothetical protein 555466 3675499 Nwi_0498 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317117.1 554819 D 323098 CDS YP_317118.1 75674697 3675500 complement(555479..555853) 1 NC_007406.1 hypothetical protein 555853 3675500 Nwi_0499 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317118.1 555479 R 323098 CDS YP_317119.1 75674698 3675501 555994..557772 1 NC_007406.1 diguanylate cyclase/phophodiesterase 557772 3675501 Nwi_0500 Nitrobacter winogradskyi Nb-255 diguanylate cyclase/phophodiesterase YP_317119.1 555994 D 323098 CDS YP_317120.1 75674699 3675502 complement(557865..558923) 1 NC_007406.1 polysaccharide deacetylase 558923 3675502 Nwi_0501 Nitrobacter winogradskyi Nb-255 polysaccharide deacetylase YP_317120.1 557865 R 323098 CDS YP_317121.1 75674700 3675503 559187..560578 1 NC_007406.1 OmpA/MotB 560578 3675503 Nwi_0502 Nitrobacter winogradskyi Nb-255 OmpA/MotB YP_317121.1 559187 D 323098 CDS YP_317122.1 75674701 3675504 560583..560909 1 NC_007406.1 hypothetical protein 560909 3675504 Nwi_0503 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317122.1 560583 D 323098 CDS YP_317123.1 75674702 3675505 561036..562091 1 NC_007406.1 hypothetical protein 562091 3675505 Nwi_0504 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317123.1 561036 D 323098 CDS YP_317124.1 75674703 3675506 562171..563424 1 NC_007406.1 Signal transduction histidine kinase 563424 3675506 Nwi_0505 Nitrobacter winogradskyi Nb-255 Signal transduction histidine kinase YP_317124.1 562171 D 323098 CDS YP_317125.1 75674704 3675507 563549..564574 1 NC_007406.1 periplasmic phosphate binding protein 564574 3675507 Nwi_0506 Nitrobacter winogradskyi Nb-255 periplasmic phosphate binding protein YP_317125.1 563549 D 323098 CDS YP_317126.1 75674705 3675508 564646..565671 1 NC_007406.1 phosphate ABC transporter permease PstC 565671 3675508 Nwi_0507 Nitrobacter winogradskyi Nb-255 phosphate ABC transporter permease PstC YP_317126.1 564646 D 323098 CDS YP_317127.1 75674706 3675509 565754..566599 1 NC_007406.1 phosphate ABC transporter permease 566599 3675509 Nwi_0508 Nitrobacter winogradskyi Nb-255 phosphate ABC transporter permease YP_317127.1 565754 D 323098 CDS YP_317128.1 75674707 3675510 566596..567417 1 NC_007406.1 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 567417 pstB 3675510 pstB Nitrobacter winogradskyi Nb-255 phosphate transporter ATP-binding protein YP_317128.1 566596 D 323098 CDS YP_317129.1 75674708 3675511 567451..568167 1 NC_007406.1 hypothetical protein 568167 3675511 Nwi_0510 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317129.1 567451 D 323098 CDS YP_317130.1 75674709 3675512 568189..568893 1 NC_007406.1 phosphate regulon transcriptional regulatory protein phoB 568893 3675512 Nwi_0511 Nitrobacter winogradskyi Nb-255 phosphate regulon transcriptional regulatory protein phoB YP_317130.1 568189 D 323098 CDS YP_317131.1 75674710 3675513 complement(569145..569651) 1 NC_007406.1 GcrA cell cycle regulator 569651 3675513 Nwi_0512 Nitrobacter winogradskyi Nb-255 GcrA cell cycle regulator YP_317131.1 569145 R 323098 CDS YP_317132.2 162139850 3675514 570129..571340 1 NC_007406.1 DapATase; functions in arginine biosynthetic pathway; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine transaminase 571340 argD 3675514 argD Nitrobacter winogradskyi Nb-255 acetylornithine transaminase YP_317132.2 570129 D 323098 CDS YP_317133.1 75674712 3675515 571337..572263 1 NC_007406.1 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; ornithine carbamoyltransferase 572263 3675515 Nwi_0514 Nitrobacter winogradskyi Nb-255 ornithine carbamoyltransferase YP_317133.1 571337 D 323098 CDS YP_317134.1 75674713 3675516 complement(572490..573746) 1 NC_007406.1 hypothetical protein 573746 3675516 Nwi_0515 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317134.1 572490 R 323098 CDS YP_317135.1 75674714 3675517 complement(573914..574558) 1 NC_007406.1 hypothetical protein 574558 3675517 Nwi_0516 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317135.1 573914 R 323098 CDS YP_317136.1 75674715 3675518 574699..575205 1 NC_007406.1 hypothetical protein 575205 3675518 Nwi_0517 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317136.1 574699 D 323098 CDS YP_317137.1 75674716 3675519 complement(575303..576121) 1 NC_007406.1 inositol monophosphatase 576121 3675519 Nwi_0518 Nitrobacter winogradskyi Nb-255 inositol monophosphatase YP_317137.1 575303 R 323098 CDS YP_317138.1 75674717 3675520 576272..576919 1 NC_007406.1 hypothetical protein 576919 3675520 Nwi_0519 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317138.1 576272 D 323098 CDS YP_317139.1 75674718 3675521 577168..579834 1 NC_007406.1 CheA kinase 579834 3675521 Nwi_0520 Nitrobacter winogradskyi Nb-255 CheA kinase YP_317139.1 577168 D 323098 CDS YP_317140.1 75674719 3675522 579846..580316 1 NC_007406.1 chemotaxis protein CheW 580316 3675522 Nwi_0521 Nitrobacter winogradskyi Nb-255 chemotaxis protein CheW YP_317140.1 579846 D 323098 CDS YP_317141.1 75674720 3675523 580376..580741 1 NC_007406.1 chemotaxis protein CheY 580741 3675523 Nwi_0522 Nitrobacter winogradskyi Nb-255 chemotaxis protein CheY YP_317141.1 580376 D 323098 CDS YP_317142.1 75674721 3675524 580784..582061 1 NC_007406.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 582061 3675524 Nwi_0523 Nitrobacter winogradskyi Nb-255 chemotaxis-specific methylesterase YP_317142.1 580784 D 323098 CDS YP_317143.1 75674722 3675525 582058..582924 1 NC_007406.1 chemotaxis protein CheR 582924 3675525 Nwi_0524 Nitrobacter winogradskyi Nb-255 chemotaxis protein CheR YP_317143.1 582058 D 323098 CDS YP_317144.1 75674723 3675526 complement(583135..583836) 1 NC_007406.1 transcriptional regulatory protein 583836 3675526 Nwi_0525 Nitrobacter winogradskyi Nb-255 transcriptional regulatory protein YP_317144.1 583135 R 323098 CDS YP_317145.1 75674724 3675527 584205..585530 1 NC_007406.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 585530 fliI 3675527 fliI Nitrobacter winogradskyi Nb-255 flagellum-specific ATP synthase YP_317145.1 584205 D 323098 CDS YP_317146.1 75674725 3675528 585635..586060 1 NC_007406.1 hypothetical protein 586060 3675528 Nwi_0527 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317146.1 585635 D 323098 CDS YP_317147.1 75674726 3675529 complement(586293..586493) 1 NC_007406.1 hypothetical protein 586493 3675529 Nwi_0528 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317147.1 586293 R 323098 CDS YP_317148.1 75674727 3675530 complement(586816..588945) 1 NC_007406.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 588945 flhA 3675530 flhA Nitrobacter winogradskyi Nb-255 flagellar biosynthesis protein FlhA YP_317148.1 586816 R 323098 CDS YP_317149.1 75674728 3675532 589867..591576 1 NC_007406.1 methyl-accepting chemotaxis protein 591576 3675532 Nwi_0530 Nitrobacter winogradskyi Nb-255 methyl-accepting chemotaxis protein YP_317149.1 589867 D 323098 CDS YP_317150.1 75674729 3674845 592343..592738 1 NC_007406.1 hypothetical protein 592738 3674845 Nwi_0531 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317150.1 592343 D 323098 CDS YP_317151.1 75674730 3674846 complement(592798..593502) 1 NC_007406.1 cobyrinic acid a,c-diamide synthase 593502 3674846 Nwi_0532 Nitrobacter winogradskyi Nb-255 cobyrinic acid a,c-diamide synthase YP_317151.1 592798 R 323098 CDS YP_317152.1 75674731 3674132 593906..594985 1 NC_007406.1 hemolysin-type calcium-binding region 594985 3674132 Nwi_0533 Nitrobacter winogradskyi Nb-255 hemolysin-type calcium-binding region YP_317152.1 593906 D 323098 CDS YP_317153.1 75674732 3676942 595282..595908 1 NC_007406.1 hypothetical protein 595908 3676942 Nwi_0534 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317153.1 595282 D 323098 CDS YP_317154.1 75674733 3676943 596417..598651 1 NC_007406.1 ABC transporter transmembrane region 598651 3676943 Nwi_0535 Nitrobacter winogradskyi Nb-255 ABC transporter transmembrane region YP_317154.1 596417 D 323098 CDS YP_317155.1 75674734 3676944 598641..599987 1 NC_007406.1 type I secretion membrane fusion protein, HlyD 599987 3676944 Nwi_0536 Nitrobacter winogradskyi Nb-255 type I secretion membrane fusion protein, HlyD YP_317155.1 598641 D 323098 CDS YP_317156.1 75674735 3676945 599987..602029 1 NC_007406.1 Sel1 repeat-containing protein 602029 3676945 Nwi_0537 Nitrobacter winogradskyi Nb-255 Sel1 repeat-containing protein YP_317156.1 599987 D 323098 CDS YP_317157.1 75674736 3676946 602193..604397 1 NC_007406.1 lipopolysaccharide biosynthesis protein 604397 3676946 Nwi_0538 Nitrobacter winogradskyi Nb-255 lipopolysaccharide biosynthesis protein YP_317157.1 602193 D 323098 CDS YP_317158.1 75674737 3676947 604413..605336 1 NC_007406.1 glycosyl transferase 605336 3676947 Nwi_0539 Nitrobacter winogradskyi Nb-255 glycosyl transferase YP_317158.1 604413 D 323098 CDS YP_317159.1 75674738 3675717 complement(605461..606606) 1 NC_007406.1 hypothetical protein 606606 3675717 Nwi_0540 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317159.1 605461 R 323098 CDS YP_317160.1 75674739 3675718 606862..608112 1 NC_007406.1 glycosyl transferase 608112 3675718 Nwi_0541 Nitrobacter winogradskyi Nb-255 glycosyl transferase YP_317160.1 606862 D 323098 CDS YP_317161.1 75674740 3676886 complement(608338..608988) 1 NC_007406.1 hypothetical protein 608988 3676886 Nwi_0542 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317161.1 608338 R 323098 CDS YP_317162.1 75674741 3676887 complement(608966..610267) 1 NC_007406.1 UDP-glucose/GDP-mannose dehydrogenase 610267 3676887 Nwi_0543 Nitrobacter winogradskyi Nb-255 UDP-glucose/GDP-mannose dehydrogenase YP_317162.1 608966 R 323098 CDS YP_317163.1 75674742 3676888 complement(610326..611393) 1 NC_007406.1 dTDP-glucose 4,6-dehydratase 611393 3676888 Nwi_0544 Nitrobacter winogradskyi Nb-255 dTDP-glucose 4,6-dehydratase YP_317163.1 610326 R 323098 CDS YP_317164.1 75674743 3676889 complement(611419..612294) 1 NC_007406.1 glucose-1-phosphate thymidylyltransferase 612294 3676889 Nwi_0545 Nitrobacter winogradskyi Nb-255 glucose-1-phosphate thymidylyltransferase YP_317164.1 611419 R 323098 CDS YP_317165.1 75674744 3676890 612357..612953 1 NC_007406.1 dTDP-4-dehydrorhamnose 3 5-epimerase-like protein 612953 3676890 Nwi_0546 Nitrobacter winogradskyi Nb-255 dTDP-4-dehydrorhamnose 3 5-epimerase-like protein YP_317165.1 612357 D 323098 CDS YP_317166.1 75674745 3676891 612965..613891 1 NC_007406.1 dTDP-4-dehydrorhamnose reductase 613891 3676891 Nwi_0547 Nitrobacter winogradskyi Nb-255 dTDP-4-dehydrorhamnose reductase YP_317166.1 612965 D 323098 CDS YP_317167.1 75674746 3676892 complement(613960..616314) 1 NC_007406.1 glycosyl transferase 616314 3676892 Nwi_0548 Nitrobacter winogradskyi Nb-255 glycosyl transferase YP_317167.1 613960 R 323098 CDS YP_317168.1 75674747 3676893 complement(616317..618773) 1 NC_007406.1 glycosyl transferase 618773 3676893 Nwi_0549 Nitrobacter winogradskyi Nb-255 glycosyl transferase YP_317168.1 616317 R 323098 CDS YP_317169.1 75674748 3676894 complement(618860..619735) 1 NC_007406.1 hypothetical protein 619735 3676894 Nwi_0550 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317169.1 618860 R 323098 CDS YP_317170.1 75674749 3676895 complement(620013..620243) 1 NC_007406.1 hypothetical protein 620243 3676895 Nwi_0551 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317170.1 620013 R 323098 CDS YP_317171.1 75674750 3676896 620528..621895 1 NC_007406.1 group 1 glycosyl transferase 621895 3676896 Nwi_0552 Nitrobacter winogradskyi Nb-255 group 1 glycosyl transferase YP_317171.1 620528 D 323098 CDS YP_317172.1 75674751 3676897 complement(621990..622733) 1 NC_007406.1 HAD family hydrolase 622733 3676897 Nwi_0553 Nitrobacter winogradskyi Nb-255 HAD family hydrolase YP_317172.1 621990 R 323098 CDS YP_317173.1 75674752 3676898 complement(622840..624684) 1 NC_007406.1 small GTP-binding protein 624684 3676898 Nwi_0554 Nitrobacter winogradskyi Nb-255 small GTP-binding protein YP_317173.1 622840 R 323098 CDS YP_317174.1 75674753 3676899 complement(625010..625768) 1 NC_007406.1 transcriptional regulatory protein 625768 3676899 Nwi_0555 Nitrobacter winogradskyi Nb-255 transcriptional regulatory protein YP_317174.1 625010 R 323098 CDS YP_317175.1 75674754 3676900 625905..626327 1 NC_007406.1 response regulator receiver 626327 3676900 Nwi_0556 Nitrobacter winogradskyi Nb-255 response regulator receiver YP_317175.1 625905 D 323098 CDS YP_317176.1 75674755 3676901 626435..627643 1 NC_007406.1 protein NnrS 627643 3676901 Nwi_0557 Nitrobacter winogradskyi Nb-255 protein NnrS YP_317176.1 626435 D 323098 CDS YP_317177.1 75674756 3676902 complement(627710..627964) 1 NC_007406.1 hypothetical protein 627964 3676902 Nwi_0558 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317177.1 627710 R 323098 CDS YP_317178.1 75674757 3676948 complement(628099..629112) 1 NC_007406.1 HWE histidine kinase 629112 3676948 Nwi_0559 Nitrobacter winogradskyi Nb-255 HWE histidine kinase YP_317178.1 628099 R 323098 CDS YP_317179.1 75674758 3676949 629371..630198 1 NC_007406.1 cyclic nucleotide-binding protein 630198 3676949 Nwi_0560 Nitrobacter winogradskyi Nb-255 cyclic nucleotide-binding protein YP_317179.1 629371 D 323098 CDS YP_317180.1 75674759 3676950 630195..631079 1 NC_007406.1 hypothetical protein 631079 3676950 Nwi_0561 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317180.1 630195 D 323098 CDS YP_317181.1 75674760 3676951 631446..631856 1 NC_007406.1 hypothetical protein 631856 3676951 Nwi_0562 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317181.1 631446 D 323098 CDS YP_317182.1 75674761 3676952 632022..632417 1 NC_007406.1 hypothetical protein 632417 3676952 Nwi_0563 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317182.1 632022 D 323098 CDS YP_317183.1 75674762 3676953 complement(632436..633167) 1 NC_007406.1 hypothetical protein 633167 3676953 Nwi_0564 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317183.1 632436 R 323098 CDS YP_317184.1 75674763 3676954 633258..633827 1 NC_007406.1 MarR family transcriptional regulator 633827 3676954 Nwi_0565 Nitrobacter winogradskyi Nb-255 MarR family transcriptional regulator YP_317184.1 633258 D 323098 CDS YP_317185.1 75674764 3676955 complement(633851..635137) 1 NC_007406.1 hypothetical protein 635137 3676955 Nwi_0566 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317185.1 633851 R 323098 CDS YP_317186.1 75674765 3676956 complement(635408..637486) 1 NC_007406.1 peptidase M23B 637486 3676956 Nwi_0567 Nitrobacter winogradskyi Nb-255 peptidase M23B YP_317186.1 635408 R 323098 CDS YP_317187.1 75674766 3677213 643874..644470 1 NC_007406.1 hypothetical protein 644470 3677213 Nwi_0568 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317187.1 643874 D 323098 CDS YP_317188.1 75674767 3677214 complement(644552..644857) 1 NC_007406.1 hypothetical protein 644857 3677214 Nwi_0569 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317188.1 644552 R 323098 CDS YP_317189.1 75674768 3677215 644871..646391 1 NC_007406.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 646391 3677215 Nwi_0570 Nitrobacter winogradskyi Nb-255 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_317189.1 644871 D 323098 CDS YP_317190.1 75674769 3677216 646661..646966 1 NC_007406.1 methylated-DNA-protein-cystein methyltransferase 646966 3677216 Nwi_0571 Nitrobacter winogradskyi Nb-255 methylated-DNA-protein-cystein methyltransferase YP_317190.1 646661 D 323098 CDS YP_317191.1 75674770 3677217 646926..647153 1 NC_007406.1 methylated-DNA--protein-cysteine methyltransferase 647153 3677217 Nwi_0572 Nitrobacter winogradskyi Nb-255 methylated-DNA--protein-cysteine methyltransferase YP_317191.1 646926 D 323098 CDS YP_317192.1 75674771 3677218 647374..649860 1 NC_007406.1 hypothetical protein 649860 3677218 Nwi_0573 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317192.1 647374 D 323098 CDS YP_317193.1 75674772 3677219 complement(649847..650239) 1 NC_007406.1 response regulator receiver 650239 3677219 Nwi_0574 Nitrobacter winogradskyi Nb-255 response regulator receiver YP_317193.1 649847 R 323098 CDS YP_317194.1 75674773 3677220 complement(650243..651100) 1 NC_007406.1 hypothetical protein 651100 3677220 Nwi_0575 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317194.1 650243 R 323098 CDS YP_317195.1 75674774 3677221 651254..651913 1 NC_007406.1 ABC transporter ATPase 651913 3677221 Nwi_0576 Nitrobacter winogradskyi Nb-255 ABC transporter ATPase YP_317195.1 651254 D 323098 CDS YP_317196.1 75674775 3677222 651933..652877 1 NC_007406.1 hypothetical protein 652877 3677222 Nwi_0577 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317196.1 651933 D 323098 CDS YP_317197.1 75674776 3677223 652971..653696 1 NC_007406.1 hypothetical protein 653696 3677223 Nwi_0578 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317197.1 652971 D 323098 CDS YP_317198.1 75674777 3677224 653775..654554 1 NC_007406.1 phospholipid/glycerol acyltransferase 654554 3677224 Nwi_0579 Nitrobacter winogradskyi Nb-255 phospholipid/glycerol acyltransferase YP_317198.1 653775 D 323098 CDS YP_317199.1 75674778 3677225 complement(654680..655264) 1 NC_007406.1 ChaC-like protein 655264 3677225 Nwi_0580 Nitrobacter winogradskyi Nb-255 ChaC-like protein YP_317199.1 654680 R 323098 CDS YP_317200.1 75674779 3677226 655447..656691 1 NC_007406.1 hypothetical protein 656691 3677226 Nwi_0581 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317200.1 655447 D 323098 CDS YP_317201.1 75674780 3677227 complement(656856..657791) 1 NC_007406.1 dual function enzyme catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate and the formation of tyrosine from arogenate; cyclohexadienyl dehydrogenase 657791 3677227 Nwi_0582 Nitrobacter winogradskyi Nb-255 cyclohexadienyl dehydrogenase YP_317201.1 656856 R 323098 CDS YP_317202.1 75674781 3677228 complement(657788..658885) 1 NC_007406.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 658885 3677228 Nwi_0583 Nitrobacter winogradskyi Nb-255 histidinol-phosphate aminotransferase YP_317202.1 657788 R 323098 CDS YP_317203.1 75674782 3677229 complement(658922..659776) 1 NC_007406.1 hypothetical protein 659776 3677229 Nwi_0584 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317203.1 658922 R 323098 CDS YP_317204.1 75674783 3677230 660098..661297 1 NC_007406.1 Catalyzes the conversion of acetyl-CoA and L-homoserine to CoA and O-acetyl-L-homoserine; homoserine O-acetyltransferase 661297 metX 3677230 metX Nitrobacter winogradskyi Nb-255 homoserine O-acetyltransferase YP_317204.1 660098 D 323098 CDS YP_317205.1 75674784 3677231 661299..661988 1 NC_007406.1 methionine biosynthesis MetW 661988 3677231 Nwi_0586 Nitrobacter winogradskyi Nb-255 methionine biosynthesis MetW YP_317205.1 661299 D 323098 CDS YP_317206.1 75674785 3677232 662316..662942 1 NC_007406.1 hypothetical protein 662942 3677232 Nwi_0587 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317206.1 662316 D 323098 CDS YP_317207.1 75674786 3676255 complement(663011..663787) 1 NC_007406.1 hypothetical protein 663787 3676255 Nwi_0588 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317207.1 663011 R 323098 CDS YP_317208.1 75674787 3676256 663965..666640 1 NC_007406.1 ATPase AAA 666640 3676256 Nwi_0589 Nitrobacter winogradskyi Nb-255 ATPase AAA YP_317208.1 663965 D 323098 CDS YP_317209.1 75674788 3676257 666952..668793 1 NC_007406.1 sulfite reductase (NADPH) flavoprotein, alpha chain 668793 3676257 Nwi_0590 Nitrobacter winogradskyi Nb-255 sulfite reductase (NADPH) flavoprotein, alpha chain YP_317209.1 666952 D 323098 CDS YP_317210.1 75674789 3676258 668804..670534 1 NC_007406.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta 670534 3676258 Nwi_0591 Nitrobacter winogradskyi Nb-255 sulfite reductase subunit beta YP_317210.1 668804 D 323098 CDS YP_317211.1 75674790 3676259 670769..671953 1 NC_007406.1 O-succinylhomoserine (thiol)-lyase 671953 3676259 Nwi_0592 Nitrobacter winogradskyi Nb-255 O-succinylhomoserine (thiol)-lyase YP_317211.1 670769 D 323098 CDS YP_317212.1 75674791 3676260 complement(672184..672567) 1 NC_007406.1 hypothetical protein 672567 3676260 Nwi_0593 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317212.1 672184 R 323098 CDS YP_317213.1 75674792 3676261 complement(672891..674000) 1 NC_007406.1 exodeoxyribonuclease V 674000 3676261 Nwi_0594 Nitrobacter winogradskyi Nb-255 exodeoxyribonuclease V YP_317213.1 672891 R 323098 CDS YP_317214.1 75674793 3676262 complement(674113..675492) 1 NC_007406.1 Fis family transcriptional regulator 675492 3676262 Nwi_0595 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_317214.1 674113 R 323098 CDS YP_317215.1 75674794 3676263 complement(675535..675885) 1 NC_007406.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 675885 3676263 Nwi_0596 Nitrobacter winogradskyi Nb-255 flagellar motor switch protein YP_317215.1 675535 R 323098 CDS YP_317216.1 75674795 3676264 complement(675875..676528) 1 NC_007406.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 676528 fliH 3676264 fliH Nitrobacter winogradskyi Nb-255 flagellar assembly protein H YP_317216.1 675875 R 323098 CDS YP_317217.1 75674796 3676265 complement(676528..677619) 1 NC_007406.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 677619 fliG 3676265 fliG Nitrobacter winogradskyi Nb-255 flagellar motor switch protein G YP_317217.1 676528 R 323098 CDS YP_317218.1 75674797 3676266 complement(677626..679251) 1 NC_007406.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 679251 fliF 3676266 fliF Nitrobacter winogradskyi Nb-255 flagellar MS-ring protein YP_317218.1 677626 R 323098 CDS YP_317219.1 75674798 3676267 complement(679422..679697) 1 NC_007406.1 hypothetical protein 679697 3676267 Nwi_0600 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317219.1 679422 R 323098 CDS YP_317220.1 75674799 3676268 complement(679882..680574) 1 NC_007406.1 flagellar hook capping protein 680574 3676268 Nwi_0601 Nitrobacter winogradskyi Nb-255 flagellar hook capping protein YP_317220.1 679882 R 323098 CDS YP_317221.1 75674800 3676269 complement(680585..682171) 1 NC_007406.1 flagellar hook-length control protein 682171 3676269 Nwi_0602 Nitrobacter winogradskyi Nb-255 flagellar hook-length control protein YP_317221.1 680585 R 323098 CDS YP_317222.1 75674801 3676270 682417..683619 1 NC_007406.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 683619 mnmA 3676270 mnmA Nitrobacter winogradskyi Nb-255 tRNA-specific 2-thiouridylase MnmA YP_317222.1 682417 D 323098 CDS YP_317223.1 75674802 3676271 683642..684280 1 NC_007406.1 UbiE/COQ5 methyltransferase 684280 3676271 Nwi_0604 Nitrobacter winogradskyi Nb-255 UbiE/COQ5 methyltransferase YP_317223.1 683642 D 323098 CDS YP_317224.1 75674803 3676272 684455..684670 1 NC_007406.1 hypothetical protein 684670 3676272 Nwi_0605 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317224.1 684455 D 323098 CDS YP_317225.1 75674804 3676035 684948..686672 1 NC_007406.1 TrkA-N, Sodium/hydrogen exchanger 686672 3676035 Nwi_0606 Nitrobacter winogradskyi Nb-255 TrkA-N, Sodium/hydrogen exchanger YP_317225.1 684948 D 323098 CDS YP_317226.1 75674805 3676036 686812..687888 1 NC_007406.1 3,4-dihydroxy-2-butanone 4-phosphate synthase 687888 3676036 Nwi_0607 Nitrobacter winogradskyi Nb-255 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_317226.1 686812 D 323098 CDS YP_317227.1 75674806 3676037 687977..689191 1 NC_007406.1 acyl-CoA dehydrogenase 689191 3676037 Nwi_0608 Nitrobacter winogradskyi Nb-255 acyl-CoA dehydrogenase YP_317227.1 687977 D 323098 CDS YP_317228.1 75674807 3676038 689410..689640 1 NC_007406.1 hypothetical protein 689640 3676038 Nwi_0609 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317228.1 689410 D 323098 CDS YP_317229.1 75674808 3676039 689695..690669 1 NC_007406.1 hypothetical protein 690669 3676039 Nwi_0610 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317229.1 689695 D 323098 CDS YP_317230.1 75674809 3676040 690674..692395 1 NC_007406.1 ABC transporter transmembrane region 692395 3676040 Nwi_0611 Nitrobacter winogradskyi Nb-255 ABC transporter transmembrane region YP_317230.1 690674 D 323098 CDS YP_317231.1 75674810 3676041 complement(692368..692622) 1 NC_007406.1 hypothetical protein 692622 3676041 Nwi_0612 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317231.1 692368 R 323098 CDS YP_317232.1 75674811 3676042 692826..693743 1 NC_007406.1 beta-lactamase-like protein 693743 3676042 Nwi_0613 Nitrobacter winogradskyi Nb-255 beta-lactamase-like protein YP_317232.1 692826 D 323098 CDS YP_317233.1 75674812 3676043 complement(693747..694700) 1 NC_007406.1 hypothetical protein 694700 3676043 Nwi_0614 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317233.1 693747 R 323098 CDS YP_317234.1 75674813 3676044 complement(694718..695656) 1 NC_007406.1 LysR family transcriptional regulator 695656 3676044 Nwi_0615 Nitrobacter winogradskyi Nb-255 LysR family transcriptional regulator YP_317234.1 694718 R 323098 CDS YP_317235.1 75674814 3676045 695774..696655 1 NC_007406.1 pirin 696655 3676045 Nwi_0616 Nitrobacter winogradskyi Nb-255 pirin YP_317235.1 695774 D 323098 CDS YP_317236.1 75674815 3676046 complement(696880..698484) 1 NC_007406.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 698484 3676046 Nwi_0617 Nitrobacter winogradskyi Nb-255 acyl-CoA synthetase YP_317236.1 696880 R 323098 CDS YP_317237.1 75674816 3676047 698789..699670 1 NC_007406.1 extensin 699670 3676047 Nwi_0618 Nitrobacter winogradskyi Nb-255 extensin YP_317237.1 698789 D 323098 CDS YP_317238.1 75674817 3676048 complement(699874..700539) 1 NC_007406.1 ErfK/YbiS/YcfS/YnhG 700539 3676048 Nwi_0619 Nitrobacter winogradskyi Nb-255 ErfK/YbiS/YcfS/YnhG YP_317238.1 699874 R 323098 CDS YP_317239.1 75674818 3676049 700598..700852 1 NC_007406.1 hypothetical protein 700852 3676049 Nwi_0620 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317239.1 700598 D 323098 CDS YP_317240.1 75674819 3676050 complement(701521..702312) 1 NC_007406.1 short-chain dehydrogenase 702312 3676050 Nwi_0621 Nitrobacter winogradskyi Nb-255 short-chain dehydrogenase YP_317240.1 701521 R 323098 CDS YP_317241.1 75674820 3676051 complement(702309..702950) 1 NC_007406.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 702950 3676051 Nwi_0622 Nitrobacter winogradskyi Nb-255 pyridoxamine 5'-phosphate oxidase YP_317241.1 702309 R 323098 CDS YP_317242.1 75674821 3676052 703085..703471 1 NC_007406.1 hypothetical protein 703471 3676052 Nwi_0623 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317242.1 703085 D 323098 CDS YP_317243.1 75674822 3676237 703592..704542 1 NC_007406.1 molecular chaperone DnaJ 704542 3676237 Nwi_0624 Nitrobacter winogradskyi Nb-255 molecular chaperone DnaJ YP_317243.1 703592 D 323098 CDS YP_317244.1 75674823 3676238 complement(704704..704910) 1 NC_007406.1 hypothetical protein 704910 3676238 Nwi_0625 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317244.1 704704 R 323098 CDS YP_317245.1 75674824 3676239 complement(705105..705737) 1 NC_007406.1 autoinducer synthesis protein 705737 3676239 Nwi_0626 Nitrobacter winogradskyi Nb-255 autoinducer synthesis protein YP_317245.1 705105 R 323098 CDS YP_317246.1 75674825 3676240 complement(705818..706543) 1 NC_007406.1 LuxR family transcriptional regulator 706543 3676240 Nwi_0627 Nitrobacter winogradskyi Nb-255 LuxR family transcriptional regulator YP_317246.1 705818 R 323098 CDS YP_317247.1 75674826 3676241 707141..707734 1 NC_007406.1 phosphoglycerate/bisphosphoglycerate mutase 707734 3676241 Nwi_0628 Nitrobacter winogradskyi Nb-255 phosphoglycerate/bisphosphoglycerate mutase YP_317247.1 707141 D 323098 CDS YP_317248.2 162139849 3676242 707876..708982 1 NC_007406.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 708982 3676242 Nwi_0629 Nitrobacter winogradskyi Nb-255 chorismate synthase YP_317248.2 707876 D 323098 CDS YP_317249.1 75674828 3676243 complement(709095..709400) 1 NC_007406.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor 709400 clpS 3676243 clpS Nitrobacter winogradskyi Nb-255 ATP-dependent Clp protease adaptor YP_317249.1 709095 R 323098 CDS YP_317250.1 75674829 3676244 complement(709531..710799) 1 NC_007406.1 RNA methyltransferase 710799 3676244 Nwi_0631 Nitrobacter winogradskyi Nb-255 RNA methyltransferase YP_317250.1 709531 R 323098 CDS YP_317251.1 75674830 3676245 complement(710792..711547) 1 NC_007406.1 hemolysin A 711547 3676245 Nwi_0632 Nitrobacter winogradskyi Nb-255 hemolysin A YP_317251.1 710792 R 323098 CDS YP_317252.1 75674831 3676246 complement(711876..713876) 1 NC_007406.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 713876 3676246 Nwi_0633 Nitrobacter winogradskyi Nb-255 1-deoxy-D-xylulose-5-phosphate synthase YP_317252.1 711876 R 323098 CDS YP_317253.1 75674832 3676247 complement(714272..714523) 1 NC_007406.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 714523 3676247 Nwi_0634 Nitrobacter winogradskyi Nb-255 exodeoxyribonuclease VII small subunit YP_317253.1 714272 R 323098 CDS YP_317254.1 75674833 3676248 complement(714621..715550) 1 NC_007406.1 histone deacetylase superfamily protein 715550 3676248 Nwi_0635 Nitrobacter winogradskyi Nb-255 histone deacetylase superfamily protein YP_317254.1 714621 R 323098 CDS YP_317255.1 75674834 3676249 complement(715632..716399) 1 NC_007406.1 enoyl-CoA hydratase 716399 3676249 Nwi_0636 Nitrobacter winogradskyi Nb-255 enoyl-CoA hydratase YP_317255.1 715632 R 323098 CDS YP_317256.1 75674835 3676250 complement(716730..718508) 1 NC_007406.1 acyl-CoA dehydrogenase 718508 3676250 Nwi_0637 Nitrobacter winogradskyi Nb-255 acyl-CoA dehydrogenase YP_317256.1 716730 R 323098 CDS YP_317257.1 75674836 3676252 718905..719186 1 NC_007406.1 hypothetical protein 719186 3676252 Nwi_0638 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317257.1 718905 D 323098 CDS YP_317258.1 75674837 3676253 719448..719822 1 NC_007406.1 transposase IS3/IS911 719822 3676253 Nwi_0639 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_317258.1 719448 D 323098 CDS YP_317259.1 75674838 3676254 719819..720799 1 NC_007406.1 Fis family transcriptional regulator 720799 3676254 Nwi_0640 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_317259.1 719819 D 323098 CDS YP_317260.1 75674839 3676217 complement(721125..722804) 1 NC_007406.1 hypothetical protein 722804 3676217 Nwi_0641 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317260.1 721125 R 323098 CDS YP_317261.1 75674840 3676218 complement(722973..724130) 1 NC_007406.1 DegT/DnrJ/EryC1/StrS aminotransferase 724130 3676218 Nwi_0642 Nitrobacter winogradskyi Nb-255 DegT/DnrJ/EryC1/StrS aminotransferase YP_317261.1 722973 R 323098 CDS YP_317262.1 75674841 3676219 complement(724127..725128) 1 NC_007406.1 short-chain dehydrogenase 725128 3676219 Nwi_0643 Nitrobacter winogradskyi Nb-255 short-chain dehydrogenase YP_317262.1 724127 R 323098 CDS YP_317263.1 75674842 3676221 complement(726120..726845) 1 NC_007406.1 acylneuraminate cytidylyltransferase 726845 3676221 Nwi_0645 Nitrobacter winogradskyi Nb-255 acylneuraminate cytidylyltransferase YP_317263.1 726120 R 323098 CDS YP_317264.1 75674843 3676222 complement(727128..727748) 1 NC_007406.1 hypothetical protein 727748 3676222 Nwi_0646 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317264.1 727128 R 323098 CDS YP_317265.1 75674844 3676223 complement(727843..728895) 1 NC_007406.1 antifreeze-like protein 728895 3676223 Nwi_0647 Nitrobacter winogradskyi Nb-255 antifreeze-like protein YP_317265.1 727843 R 323098 CDS YP_317266.1 75674845 3676224 complement(729064..729849) 1 NC_007406.1 NUDIX hydrolase 729849 3676224 Nwi_0648 Nitrobacter winogradskyi Nb-255 NUDIX hydrolase YP_317266.1 729064 R 323098 CDS YP_317267.1 75674846 3676225 complement(729843..730505) 1 NC_007406.1 HAD family hydrolase 730505 3676225 Nwi_0649 Nitrobacter winogradskyi Nb-255 HAD family hydrolase YP_317267.1 729843 R 323098 CDS YP_317268.1 75674847 3676226 complement(730505..731323) 1 NC_007406.1 hypothetical protein 731323 3676226 Nwi_0650 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317268.1 730505 R 323098 CDS YP_317269.1 75674848 3676227 complement(731492..732193) 1 NC_007406.1 hypothetical protein 732193 3676227 Nwi_0651 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317269.1 731492 R 323098 CDS YP_317270.1 75674849 3676228 732334..732639 1 NC_007406.1 hypothetical protein 732639 3676228 Nwi_0652 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317270.1 732334 D 323098 CDS YP_317271.1 75674850 3676229 732820..734415 1 NC_007406.1 beta-lactamase 734415 3676229 Nwi_0653 Nitrobacter winogradskyi Nb-255 beta-lactamase YP_317271.1 732820 D 323098 CDS YP_317272.1 75674851 3676230 complement(734618..735259) 1 NC_007406.1 ISRm2011-2 transposase 735259 3676230 Nwi_0654 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_317272.1 734618 R 323098 CDS YP_317273.1 75674852 3676231 complement(735211..735561) 1 NC_007406.1 transposase 735561 3676231 Nwi_0655 Nitrobacter winogradskyi Nb-255 transposase YP_317273.1 735211 R 323098 CDS YP_317274.1 75674853 3676232 736051..736506 1 NC_007406.1 sigma-70 region 2 736506 3676232 Nwi_0656 Nitrobacter winogradskyi Nb-255 sigma-70 region 2 YP_317274.1 736051 D 323098 CDS YP_317275.1 75674854 3676233 736647..737660 1 NC_007406.1 FecR protein 737660 3676233 Nwi_0657 Nitrobacter winogradskyi Nb-255 FecR protein YP_317275.1 736647 D 323098 CDS YP_317276.1 75674855 3676234 737772..739295 1 NC_007406.1 secretin/TonB 739295 3676234 Nwi_0658 Nitrobacter winogradskyi Nb-255 secretin/TonB YP_317276.1 737772 D 323098 CDS YP_317277.1 75674856 3676235 739349..739723 1 NC_007406.1 transposase IS3/IS911 739723 3676235 Nwi_0659 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_317277.1 739349 D 323098 CDS YP_317278.1 75674857 3676236 739720..740700 1 NC_007406.1 Fis family transcriptional regulator 740700 3676236 Nwi_0660 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_317278.1 739720 D 323098 CDS YP_317279.1 75674858 3674985 740713..741852 1 NC_007406.1 TonB-dependent receptor 741852 3674985 Nwi_0661 Nitrobacter winogradskyi Nb-255 TonB-dependent receptor YP_317279.1 740713 D 323098 CDS YP_317280.1 75674859 3674986 742325..743104 1 NC_007406.1 XRE family transcriptional regulator 743104 3674986 Nwi_0662 Nitrobacter winogradskyi Nb-255 XRE family transcriptional regulator YP_317280.1 742325 D 323098 CDS YP_317281.1 75674860 3674987 743125..743559 1 NC_007406.1 hypothetical protein 743559 3674987 Nwi_0663 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317281.1 743125 D 323098 CDS YP_317282.1 75674861 3674988 complement(743747..745285) 1 NC_007406.1 porin 745285 3674988 Nwi_0664 Nitrobacter winogradskyi Nb-255 porin YP_317282.1 743747 R 323098 CDS YP_317283.1 75674862 3674989 746258..747151 1 NC_007406.1 branched chain amino acid ABC transporter permease 747151 3674989 Nwi_0665 Nitrobacter winogradskyi Nb-255 branched chain amino acid ABC transporter permease YP_317283.1 746258 D 323098 CDS YP_317284.1 75674863 3674990 747148..748197 1 NC_007406.1 branched-chain amino acid ABC transporter permease 748197 3674990 Nwi_0666 Nitrobacter winogradskyi Nb-255 branched-chain amino acid ABC transporter permease YP_317284.1 747148 D 323098 CDS YP_317285.1 75674864 3674991 748223..749494 1 NC_007406.1 ABC-type branched-chain amino acid transport systems periplasmic component 749494 3674991 Nwi_0667 Nitrobacter winogradskyi Nb-255 ABC-type branched-chain amino acid transport systems periplasmic component YP_317285.1 748223 D 323098 CDS YP_317286.1 75674865 3674992 749491..750309 1 NC_007406.1 branched-chain amino acid ABC transporter ATPase 750309 3674992 Nwi_0668 Nitrobacter winogradskyi Nb-255 branched-chain amino acid ABC transporter ATPase YP_317286.1 749491 D 323098 CDS YP_317287.1 75674866 3674993 750309..751013 1 NC_007406.1 branched-chain amino acid ABC transporter ATPase 751013 3674993 Nwi_0669 Nitrobacter winogradskyi Nb-255 branched-chain amino acid ABC transporter ATPase YP_317287.1 750309 D 323098 CDS YP_317288.1 75674867 3674994 complement(751218..751835) 1 NC_007406.1 cytochrome c553 751835 3674994 Nwi_0670 Nitrobacter winogradskyi Nb-255 cytochrome c553 YP_317288.1 751218 R 323098 CDS YP_317289.1 75674868 3674995 complement(751935..752774) 1 NC_007406.1 nitrate/sulfonate/bicarbonate ABC transporter ATPase 752774 3674995 Nwi_0671 Nitrobacter winogradskyi Nb-255 nitrate/sulfonate/bicarbonate ABC transporter ATPase YP_317289.1 751935 R 323098 CDS YP_317290.1 75674869 3674996 complement(752771..753451) 1 NC_007406.1 hypothetical protein 753451 3674996 Nwi_0672 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317290.1 752771 R 323098 CDS YP_317291.1 75674870 3674997 complement(753448..754275) 1 NC_007406.1 binding-protein dependent transport system inner membrane protein 754275 3674997 Nwi_0673 Nitrobacter winogradskyi Nb-255 binding-protein dependent transport system inner membrane protein YP_317291.1 753448 R 323098 CDS YP_317292.1 75674871 3674998 complement(754312..755736) 1 NC_007406.1 ABC transporter sulfonate/nitrate transport system substrate-binding protein 755736 3674998 Nwi_0674 Nitrobacter winogradskyi Nb-255 ABC transporter sulfonate/nitrate transport system substrate-binding protein YP_317292.1 754312 R 323098 CDS YP_317293.1 75674872 3674999 756106..756828 1 NC_007406.1 cyclic nucleotide-binding protein 756828 3674999 Nwi_0675 Nitrobacter winogradskyi Nb-255 cyclic nucleotide-binding protein YP_317293.1 756106 D 323098 CDS YP_317294.1 75674873 3675000 complement(756829..757791) 1 NC_007406.1 PBS lyase 757791 3675000 Nwi_0676 Nitrobacter winogradskyi Nb-255 PBS lyase YP_317294.1 756829 R 323098 CDS YP_317295.1 75674874 3675001 complement(757793..758026) 1 NC_007406.1 4Fe-4S ferredoxin 758026 3675001 Nwi_0677 Nitrobacter winogradskyi Nb-255 4Fe-4S ferredoxin YP_317295.1 757793 R 323098 CDS YP_317296.1 75674875 3675002 complement(758037..759773) 1 NC_007406.1 oxidoreductase 759773 3675002 Nwi_0678 Nitrobacter winogradskyi Nb-255 oxidoreductase YP_317296.1 758037 R 323098 CDS YP_317297.1 75674876 3675003 complement(759787..760080) 1 NC_007406.1 hypothetical protein 760080 3675003 Nwi_0679 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317297.1 759787 R 323098 CDS YP_317298.1 75674877 3676903 760620..761339 1 NC_007406.1 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components 761339 3676903 Nwi_0680 Nitrobacter winogradskyi Nb-255 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components YP_317298.1 760620 D 323098 CDS YP_317299.1 75674878 3676904 761314..761568 1 NC_007406.1 sulfonate/nitrate transport system substrate-binding protein 761568 3676904 Nwi_0681 Nitrobacter winogradskyi Nb-255 sulfonate/nitrate transport system substrate-binding protein YP_317299.1 761314 D 323098 CDS YP_317300.1 75674879 3676905 761565..762755 1 NC_007406.1 catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase 762755 3676905 Nwi_0682 Nitrobacter winogradskyi Nb-255 alkanesulfonate monooxygenase YP_317300.1 761565 D 323098 CDS YP_317301.1 75674880 3676906 762752..763558 1 NC_007406.1 binding-protein dependent transport system inner membrane protein 763558 3676906 Nwi_0683 Nitrobacter winogradskyi Nb-255 binding-protein dependent transport system inner membrane protein YP_317301.1 762752 D 323098 CDS YP_317302.1 75674881 3676907 763738..764193 1 NC_007406.1 ABC transporter ATPase 764193 3676907 Nwi_0684 Nitrobacter winogradskyi Nb-255 ABC transporter ATPase YP_317302.1 763738 D 323098 CDS YP_317303.1 75674882 3676908 764177..764443 1 NC_007406.1 aliphatic sulfonate ABC transporter ATP-binding protein 764443 3676908 Nwi_0685 Nitrobacter winogradskyi Nb-255 aliphatic sulfonate ABC transporter ATP-binding protein YP_317303.1 764177 D 323098 CDS YP_317304.1 75674883 3676909 764480..765061 1 NC_007406.1 flavin reductase-like, FMN-binding 765061 3676909 Nwi_0686 Nitrobacter winogradskyi Nb-255 flavin reductase-like, FMN-binding YP_317304.1 764480 D 323098 CDS YP_317305.1 75674884 3676910 765730..767709 1 NC_007406.1 hypothetical protein 767709 3676910 Nwi_0687 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317305.1 765730 D 323098 CDS YP_317306.1 75674885 3676911 767721..768200 1 NC_007406.1 3-demethylubiquinone-9 3-methyltransferase 768200 3676911 Nwi_0688 Nitrobacter winogradskyi Nb-255 3-demethylubiquinone-9 3-methyltransferase YP_317306.1 767721 D 323098 CDS YP_317307.1 75674886 3676912 complement(768213..769382) 1 NC_007406.1 pyrroloquinoline quinone biosynthesis protein PqqE 769382 3676912 Nwi_0689 Nitrobacter winogradskyi Nb-255 pyrroloquinoline quinone biosynthesis protein PqqE YP_317307.1 768213 R 323098 CDS YP_317308.1 75674887 3676913 complement(769379..769681) 1 NC_007406.1 coenzyme PQQ synthesis D 769681 3676913 Nwi_0690 Nitrobacter winogradskyi Nb-255 coenzyme PQQ synthesis D YP_317308.1 769379 R 323098 CDS YP_317309.1 75674888 3676914 complement(769650..770501) 1 NC_007406.1 Required in the synthesis of PPQ, but its exact function is unknown; pyrroloquinoline quinone biosynthesis protein PqqC 770501 3676914 Nwi_0691 Nitrobacter winogradskyi Nb-255 pyrroloquinoline quinone biosynthesis protein PqqC YP_317309.1 769650 R 323098 CDS YP_317310.1 75674889 3676915 complement(770446..771345) 1 NC_007406.1 possibly involved in transport of pyrroloquinoline quinone transport; pyrroloquinoline quinone biosynthesis protein PqqB 771345 3676915 Nwi_0692 Nitrobacter winogradskyi Nb-255 pyrroloquinoline quinone biosynthesis protein PqqB YP_317310.1 770446 R 323098 CDS YP_317311.1 75674890 3676916 complement(771724..772848) 1 NC_007406.1 hypothetical protein 772848 3676916 Nwi_0693 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317311.1 771724 R 323098 CDS YP_317312.1 75674891 3676917 773194..774594 1 NC_007406.1 cytochrome c Hsc 774594 3676917 Nwi_0694 Nitrobacter winogradskyi Nb-255 cytochrome c Hsc YP_317312.1 773194 D 323098 CDS YP_317313.1 75674892 3676918 774803..775906 1 NC_007406.1 group 1 glycosyl transferase 775906 3676918 Nwi_0695 Nitrobacter winogradskyi Nb-255 group 1 glycosyl transferase YP_317313.1 774803 D 323098 CDS YP_317314.1 75674893 3676919 775937..776626 1 NC_007406.1 UbiE/COQ5 methyltransferase 776626 3676919 Nwi_0696 Nitrobacter winogradskyi Nb-255 UbiE/COQ5 methyltransferase YP_317314.1 775937 D 323098 CDS YP_317315.1 75674894 3676920 776874..777500 1 NC_007406.1 hypothetical protein 777500 3676920 Nwi_0697 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317315.1 776874 D 323098 CDS YP_317316.1 75674895 3676921 complement(777526..779190) 1 NC_007406.1 class III aminotransferase 779190 3676921 Nwi_0698 Nitrobacter winogradskyi Nb-255 class III aminotransferase YP_317316.1 777526 R 323098 CDS YP_317317.1 75674896 3676922 779231..780124 1 NC_007406.1 phosphatidylserine decarboxylase 780124 3676922 Nwi_0699 Nitrobacter winogradskyi Nb-255 phosphatidylserine decarboxylase YP_317317.1 779231 D 323098 CDS YP_317318.1 75674897 3674946 780447..782804 1 NC_007406.1 TonB-dependent receptor 782804 3674946 Nwi_0700 Nitrobacter winogradskyi Nb-255 TonB-dependent receptor YP_317318.1 780447 D 323098 CDS YP_317319.1 75674898 3674947 783183..783863 1 NC_007406.1 hydroxylase 783863 3674947 Nwi_0701 Nitrobacter winogradskyi Nb-255 hydroxylase YP_317319.1 783183 D 323098 CDS YP_317320.1 75674899 3674948 784074..785183 1 NC_007406.1 FMN-dependent alpha-hydroxy acid dehydrogenase 785183 3674948 Nwi_0702 Nitrobacter winogradskyi Nb-255 FMN-dependent alpha-hydroxy acid dehydrogenase YP_317320.1 784074 D 323098 CDS YP_317321.1 75674900 3674949 785786..786988 1 NC_007406.1 MotA/TolQ/ExbB proton channel 786988 3674949 Nwi_0703 Nitrobacter winogradskyi Nb-255 MotA/TolQ/ExbB proton channel YP_317321.1 785786 D 323098 CDS YP_317322.1 75674901 3674950 786995..787465 1 NC_007406.1 biopolymer transport protein ExbD/TolR 787465 3674950 Nwi_0704 Nitrobacter winogradskyi Nb-255 biopolymer transport protein ExbD/TolR YP_317322.1 786995 D 323098 CDS YP_317323.1 75674902 3674951 787462..788265 1 NC_007406.1 TonB protein 788265 3674951 Nwi_0705 Nitrobacter winogradskyi Nb-255 TonB protein YP_317323.1 787462 D 323098 CDS YP_317324.1 75674903 3674952 788265..788825 1 NC_007406.1 invasion associated locus B 788825 3674952 Nwi_0706 Nitrobacter winogradskyi Nb-255 invasion associated locus B YP_317324.1 788265 D 323098 CDS YP_317325.1 75674904 3674953 complement(789068..789709) 1 NC_007406.1 ISRm2011-2 transposase 789709 3674953 Nwi_0707 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_317325.1 789068 R 323098 CDS YP_317326.1 75674905 3674954 complement(789661..790011) 1 NC_007406.1 transposase 790011 3674954 Nwi_0708 Nitrobacter winogradskyi Nb-255 transposase YP_317326.1 789661 R 323098 CDS YP_317327.1 75674906 3674955 complement(790808..791005) 1 NC_007406.1 hypothetical protein 791005 3674955 Nwi_0709 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317327.1 790808 R 323098 CDS YP_317328.1 75674907 3674956 complement(791600..792346) 1 NC_007406.1 hypothetical protein 792346 3674956 Nwi_0710 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317328.1 791600 R 323098 CDS YP_317329.1 75674908 3674957 793053..793460 1 NC_007406.1 hypothetical protein 793460 3674957 Nwi_0711 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317329.1 793053 D 323098 CDS YP_317330.1 75674909 3674958 complement(793855..794409) 1 NC_007406.1 cytochrome c, class I 794409 3674958 Nwi_0712 Nitrobacter winogradskyi Nb-255 cytochrome c, class I YP_317330.1 793855 R 323098 CDS YP_317331.1 75674910 3674959 complement(794740..796005) 1 NC_007406.1 diaminopimelate decarboxylase 796005 3674959 Nwi_0713 Nitrobacter winogradskyi Nb-255 diaminopimelate decarboxylase YP_317331.1 794740 R 323098 CDS YP_317332.1 75674911 3674960 complement(796141..796446) 1 NC_007406.1 hypothetical protein 796446 3674960 Nwi_0714 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317332.1 796141 R 323098 CDS YP_317333.1 75674912 3674961 complement(796508..797905) 1 NC_007406.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 797905 3674961 Nwi_0715 Nitrobacter winogradskyi Nb-255 argininosuccinate lyase YP_317333.1 796508 R 323098 CDS YP_317334.1 75674913 3674962 798045..798716 1 NC_007406.1 thioredoxin-like protein 798716 3674962 Nwi_0716 Nitrobacter winogradskyi Nb-255 thioredoxin-like protein YP_317334.1 798045 D 323098 CDS YP_317335.1 75674914 3674963 799266..803639 1 NC_007406.1 hypothetical protein 803639 3674963 Nwi_0717 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317335.1 799266 D 323098 CDS YP_317336.1 75674915 3674964 complement(803845..804174) 1 NC_007406.1 hypothetical protein 804174 3674964 Nwi_0718 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317336.1 803845 R 323098 CDS YP_317337.1 75674916 3676923 804319..806781 1 NC_007406.1 BFD-like (2Fe-2S)-binding protein 806781 3676923 Nwi_0719 Nitrobacter winogradskyi Nb-255 BFD-like (2Fe-2S)-binding protein YP_317337.1 804319 D 323098 CDS YP_317338.1 75674917 3676924 806778..807107 1 NC_007406.1 Rieske (2Fe-2S) protein 807107 3676924 Nwi_0720 Nitrobacter winogradskyi Nb-255 Rieske (2Fe-2S) protein YP_317338.1 806778 D 323098 CDS YP_317339.1 75674918 3676925 807624..808250 1 NC_007406.1 glutathione S-transferase 808250 3676925 Nwi_0721 Nitrobacter winogradskyi Nb-255 glutathione S-transferase YP_317339.1 807624 D 323098 CDS YP_317340.1 75674919 3676926 808247..809215 1 NC_007406.1 hypothetical protein 809215 3676926 Nwi_0722 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317340.1 808247 D 323098 CDS YP_317341.1 75674920 3676927 809408..809617 1 NC_007406.1 hypothetical protein 809617 3676927 Nwi_0723 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317341.1 809408 D 323098 CDS YP_317342.1 75674921 3676928 809694..810686 1 NC_007406.1 FecR protein 810686 3676928 Nwi_0724 Nitrobacter winogradskyi Nb-255 FecR protein YP_317342.1 809694 D 323098 CDS YP_317343.1 75674922 3676929 810794..812695 1 NC_007406.1 TonB-dependent receptor protein 812695 3676929 Nwi_0725 Nitrobacter winogradskyi Nb-255 TonB-dependent receptor protein YP_317343.1 810794 D 323098 CDS YP_317344.1 75674923 3676930 812692..813231 1 NC_007406.1 ferric siderophore receptor 813231 3676930 Nwi_0726 Nitrobacter winogradskyi Nb-255 ferric siderophore receptor YP_317344.1 812692 D 323098 CDS YP_317345.1 75674924 3676931 813841..814290 1 NC_007406.1 hypothetical protein 814290 3676931 Nwi_0727 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317345.1 813841 D 323098 CDS YP_317346.1 75674925 3676932 814287..815561 1 NC_007406.1 hypothetical protein 815561 3676932 Nwi_0728 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317346.1 814287 D 323098 CDS YP_317347.1 75674926 3676933 815576..816109 1 NC_007406.1 hypothetical protein 816109 3676933 Nwi_0729 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317347.1 815576 D 323098 CDS YP_317348.1 75674927 3676934 816327..817706 1 NC_007406.1 type IV secretory pathway VirD4 components 817706 3676934 Nwi_0730 Nitrobacter winogradskyi Nb-255 type IV secretory pathway VirD4 components YP_317348.1 816327 D 323098 CDS YP_317349.1 75674928 3676935 complement(817732..818067) 1 NC_007406.1 hypothetical protein 818067 3676935 Nwi_0731 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317349.1 817732 R 323098 CDS YP_317350.1 75674929 3676936 complement(818064..818417) 1 NC_007406.1 hypothetical protein 818417 3676936 Nwi_0732 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317350.1 818064 R 323098 CDS YP_317351.1 75674930 3676937 818733..819362 1 NC_007406.1 outer membrane protein 819362 3676937 Nwi_0733 Nitrobacter winogradskyi Nb-255 outer membrane protein YP_317351.1 818733 D 323098 CDS YP_317352.1 75674931 3676938 complement(819773..820015) 1 NC_007406.1 IS511, transposase OrfB 820015 3676938 Nwi_0734 Nitrobacter winogradskyi Nb-255 IS511, transposase OrfB YP_317352.1 819773 R 323098 CDS YP_317353.1 75674932 3676939 821024..823315 1 NC_007406.1 hypothetical protein 823315 3676939 Nwi_0735 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317353.1 821024 D 323098 CDS YP_317354.1 75674933 3676940 complement(823419..824285) 1 NC_007406.1 hypothetical protein 824285 3676940 Nwi_0736 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317354.1 823419 R 323098 CDS YP_317355.1 75674934 3675994 824553..826181 1 NC_007406.1 resolvase 826181 3675994 Nwi_0737 Nitrobacter winogradskyi Nb-255 resolvase YP_317355.1 824553 D 323098 CDS YP_317356.1 75674935 3674353 826403..826927 1 NC_007406.1 hypothetical protein 826927 3674353 Nwi_0738 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317356.1 826403 D 323098 CDS YP_317357.1 75674936 3674354 complement(827115..827387) 1 NC_007406.1 hypothetical protein 827387 3674354 Nwi_0739 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317357.1 827115 R 323098 CDS YP_317358.1 75674937 3674355 827403..828005 1 NC_007406.1 hypothetical protein 828005 3674355 Nwi_0740 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317358.1 827403 D 323098 CDS YP_317359.1 75674938 3674356 828012..828680 1 NC_007406.1 DSBA oxidoreductase 828680 3674356 Nwi_0741 Nitrobacter winogradskyi Nb-255 DSBA oxidoreductase YP_317359.1 828012 D 323098 CDS YP_317360.1 75674939 3674357 complement(828718..829140) 1 NC_007406.1 hypothetical protein 829140 3674357 Nwi_0742 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317360.1 828718 R 323098 CDS YP_317361.1 75674940 3674358 829423..829875 1 NC_007406.1 hypothetical protein 829875 3674358 Nwi_0743 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317361.1 829423 D 323098 CDS YP_317362.1 75674941 3674359 complement(829993..830964) 1 NC_007406.1 serine protease 830964 3674359 Nwi_0744 Nitrobacter winogradskyi Nb-255 serine protease YP_317362.1 829993 R 323098 CDS YP_317363.1 75674942 3674360 complement(831106..831681) 1 NC_007406.1 HNH endonuclease 831681 3674360 Nwi_0745 Nitrobacter winogradskyi Nb-255 HNH endonuclease YP_317363.1 831106 R 323098 CDS YP_317364.1 75674943 3674362 complement(833659..834312) 1 NC_007406.1 DNA-3-methyladenine glycosidase II 834312 3674362 Nwi_0747 Nitrobacter winogradskyi Nb-255 DNA-3-methyladenine glycosidase II YP_317364.1 833659 R 323098 CDS YP_317365.1 75674944 3674363 834359..835231 1 NC_007406.1 this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase 835231 3674363 Nwi_0748 Nitrobacter winogradskyi Nb-255 glutamyl-Q tRNA(Asp) synthetase YP_317365.1 834359 D 323098 CDS YP_317366.1 75674945 3674364 835353..836609 1 NC_007406.1 Signal transduction histidine kinase 836609 3674364 Nwi_0749 Nitrobacter winogradskyi Nb-255 Signal transduction histidine kinase YP_317366.1 835353 D 323098 CDS YP_317367.1 75674946 3674365 complement(836536..837429) 1 NC_007406.1 ribonuclease BN 837429 3674365 Nwi_0750 Nitrobacter winogradskyi Nb-255 ribonuclease BN YP_317367.1 836536 R 323098 CDS YP_317368.1 75674947 3674366 837574..837768 1 NC_007406.1 hypothetical protein 837768 3674366 Nwi_0751 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317368.1 837574 D 323098 CDS YP_317369.1 75674948 3674367 837798..838370 1 NC_007406.1 cobalamin adenosyltransferase 838370 3674367 Nwi_0752 Nitrobacter winogradskyi Nb-255 cobalamin adenosyltransferase YP_317369.1 837798 D 323098 CDS YP_317370.1 75674949 3674368 838516..839271 1 NC_007406.1 electron transfer flavoprotein subunit beta 839271 3674368 Nwi_0753 Nitrobacter winogradskyi Nb-255 electron transfer flavoprotein subunit beta YP_317370.1 838516 D 323098 CDS YP_317371.1 75674950 3674369 839271..840215 1 NC_007406.1 electron transfer flavoprotein alpha and beta-subunits 840215 3674369 Nwi_0754 Nitrobacter winogradskyi Nb-255 electron transfer flavoprotein alpha and beta-subunits YP_317371.1 839271 D 323098 CDS YP_317372.1 75674951 3674370 840321..841202 1 NC_007406.1 converts (S)-3-hydroxybutanoyl-CoA to 3-acetoacetyl-CoA; 3-hydroxybutyryl-CoA dehydrogenase 841202 3674370 Nwi_0755 Nitrobacter winogradskyi Nb-255 3-hydroxybutyryl-CoA dehydrogenase YP_317372.1 840321 D 323098 CDS YP_317373.1 75674952 3676073 complement(841629..842690) 1 NC_007406.1 cobalamin synthesis protein CobW 842690 3676073 Nwi_0756 Nitrobacter winogradskyi Nb-255 cobalamin synthesis protein CobW YP_317373.1 841629 R 323098 CDS YP_317374.1 75674953 3676074 complement(842907..843188) 1 NC_007406.1 hypothetical protein 843188 3676074 Nwi_0757 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317374.1 842907 R 323098 CDS YP_317375.1 75674954 3676075 843731..843988 1 NC_007406.1 hypothetical protein 843988 3676075 Nwi_0758 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317375.1 843731 D 323098 CDS YP_317376.1 75674955 3676076 844167..845435 1 NC_007406.1 hypothetical protein 845435 3676076 Nwi_0759 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317376.1 844167 D 323098 CDS YP_317377.1 75674956 3676077 complement(845451..845903) 1 NC_007406.1 hypothetical protein 845903 3676077 Nwi_0760 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317377.1 845451 R 323098 CDS YP_317378.1 75674957 3676078 846483..847340 1 NC_007406.1 cytochrome c oxidase, subunit II 847340 3676078 Nwi_0761 Nitrobacter winogradskyi Nb-255 cytochrome c oxidase, subunit II YP_317378.1 846483 D 323098 CDS YP_317379.1 75674958 3676079 847441..849060 1 NC_007406.1 cytochrome c oxidase subunit I 849060 3676079 Nwi_0762 Nitrobacter winogradskyi Nb-255 cytochrome c oxidase subunit I YP_317379.1 847441 D 323098 CDS YP_317380.1 75674959 3676080 849000..850061 1 NC_007406.1 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 850061 3676080 Nwi_0763 Nitrobacter winogradskyi Nb-255 protoheme IX farnesyltransferase YP_317380.1 849000 D 323098 CDS YP_317381.1 75674960 3676081 850078..850248 1 NC_007406.1 CoxF protein 850248 3676081 Nwi_0764 Nitrobacter winogradskyi Nb-255 CoxF protein YP_317381.1 850078 D 323098 CDS YP_317382.1 75674961 3676082 850255..850896 1 NC_007406.1 involved in the insertion of copper into subunit I of cytochrome C oxidase; cytochrome C oxidase assembly protein 850896 3676082 Nwi_0765 Nitrobacter winogradskyi Nb-255 cytochrome C oxidase assembly protein YP_317382.1 850255 D 323098 CDS YP_317383.1 75674962 3676083 850993..851847 1 NC_007406.1 cytochrome c oxidase subunit III 851847 3676083 Nwi_0766 Nitrobacter winogradskyi Nb-255 cytochrome c oxidase subunit III YP_317383.1 850993 D 323098 CDS YP_317384.1 75674963 3676084 851920..852312 1 NC_007406.1 hypothetical protein 852312 3676084 Nwi_0767 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317384.1 851920 D 323098 CDS YP_317385.1 75674964 3674849 852309..853061 1 NC_007406.1 surfeit locus 1 853061 3674849 Nwi_0768 Nitrobacter winogradskyi Nb-255 surfeit locus 1 YP_317385.1 852309 D 323098 CDS YP_317386.1 75674965 3674850 complement(853108..853833) 1 NC_007406.1 cytochrome o ubiquinol oxidase subunit III 853833 3674850 Nwi_0769 Nitrobacter winogradskyi Nb-255 cytochrome o ubiquinol oxidase subunit III YP_317386.1 853108 R 323098 CDS YP_317387.1 75674966 3674309 complement(853830..855803) 1 NC_007406.1 cytochrome c oxidase subunit I 855803 3674309 Nwi_0770 Nitrobacter winogradskyi Nb-255 cytochrome c oxidase subunit I YP_317387.1 853830 R 323098 CDS YP_317388.1 75674967 3674310 complement(855976..857487) 1 NC_007406.1 glycosyltransferase 857487 3674310 Nwi_0771 Nitrobacter winogradskyi Nb-255 glycosyltransferase YP_317388.1 855976 R 323098 CDS YP_317389.1 75674968 3674311 complement(857625..858371) 1 NC_007406.1 hypothetical protein 858371 3674311 Nwi_0772 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317389.1 857625 R 323098 CDS YP_317390.1 75674969 3674312 859059..860039 1 NC_007406.1 cytochrome c, class I 860039 3674312 Nwi_0773 Nitrobacter winogradskyi Nb-255 cytochrome c, class I YP_317390.1 859059 D 323098 CDS YP_317391.1 75674970 3674313 860039..863683 1 NC_007406.1 nitrate reductase subunit alpha 863683 3674313 Nwi_0774 Nitrobacter winogradskyi Nb-255 nitrate reductase subunit alpha YP_317391.1 860039 D 323098 CDS YP_317392.1 75674971 3676053 complement(863959..864156) 1 NC_007406.1 hypothetical protein 864156 3676053 Nwi_0775 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317392.1 863959 R 323098 CDS YP_317393.1 75674972 3676054 864442..865983 1 NC_007406.1 nitrate reductase subunit beta 865983 3676054 Nwi_0776 Nitrobacter winogradskyi Nb-255 nitrate reductase subunit beta YP_317393.1 864442 D 323098 CDS YP_317394.1 75674973 3676055 866119..867147 1 NC_007406.1 nitrate reductase subunit delta 867147 3676055 Nwi_0777 Nitrobacter winogradskyi Nb-255 nitrate reductase subunit delta YP_317394.1 866119 D 323098 CDS YP_317395.1 75674974 3676056 867182..867859 1 NC_007406.1 nitrate reductase gamma subunit 867859 3676056 Nwi_0778 Nitrobacter winogradskyi Nb-255 nitrate reductase gamma subunit YP_317395.1 867182 D 323098 CDS YP_317396.1 75674975 3676057 868091..869347 1 NC_007406.1 major facilitator transporter 869347 3676057 Nwi_0779 Nitrobacter winogradskyi Nb-255 major facilitator transporter YP_317396.1 868091 D 323098 CDS YP_317397.1 75674976 3676058 869453..870526 1 NC_007406.1 C4-dicarboxylate transporter/malic acid transport protein 870526 3676058 Nwi_0780 Nitrobacter winogradskyi Nb-255 C4-dicarboxylate transporter/malic acid transport protein YP_317397.1 869453 D 323098 CDS YP_317398.1 75674977 3676059 complement(870660..871025) 1 NC_007406.1 transposase (class I) 871025 3676059 Nwi_0781 Nitrobacter winogradskyi Nb-255 transposase (class I) YP_317398.1 870660 R 323098 CDS YP_317399.1 75674978 3676060 complement(871679..872392) 1 NC_007406.1 integrase, catalytic region 872392 3676060 Nwi_0782 Nitrobacter winogradskyi Nb-255 integrase, catalytic region YP_317399.1 871679 R 323098 CDS YP_317400.1 75674979 3676061 complement(872656..873030) 1 NC_007406.1 transposase IS3/IS911 873030 3676061 Nwi_0783 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_317400.1 872656 R 323098 CDS YP_317401.1 75674980 3676062 complement(873123..873389) 1 NC_007406.1 prevent-host-death protein 873389 3676062 Nwi_0784 Nitrobacter winogradskyi Nb-255 prevent-host-death protein YP_317401.1 873123 R 323098 CDS YP_317402.1 75674981 3676063 873442..874263 1 NC_007406.1 hypothetical protein 874263 3676063 Nwi_0785 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317402.1 873442 D 323098 CDS YP_317403.1 75674982 3676064 874270..875250 1 NC_007406.1 hypothetical protein 875250 3676064 Nwi_0786 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317403.1 874270 D 323098 CDS YP_317404.1 75674983 3676065 complement(875243..875497) 1 NC_007406.1 hypothetical protein 875497 3676065 Nwi_0787 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317404.1 875243 R 323098 CDS YP_317405.1 75674984 3676066 complement(875639..875827) 1 NC_007406.1 hypothetical protein 875827 3676066 Nwi_0788 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317405.1 875639 R 323098 CDS YP_317406.1 75674985 3676067 complement(875852..876421) 1 NC_007406.1 hypothetical protein 876421 3676067 Nwi_0789 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317406.1 875852 R 323098 CDS YP_317407.1 75674986 3676068 complement(876496..876846) 1 NC_007406.1 hypothetical protein 876846 3676068 Nwi_0790 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317407.1 876496 R 323098 CDS YP_317408.1 75674987 3676069 complement(876859..877557) 1 NC_007406.1 hypothetical protein 877557 3676069 Nwi_0791 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317408.1 876859 R 323098 CDS YP_317409.1 75674988 3676070 complement(877569..881510) 1 NC_007406.1 gene transfer agent (GTA) like protein 881510 3676070 Nwi_0792 Nitrobacter winogradskyi Nb-255 gene transfer agent (GTA) like protein YP_317409.1 877569 R 323098 CDS YP_317410.1 75674989 3676071 881609..881872 1 NC_007406.1 hypothetical protein 881872 3676071 Nwi_0793 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317410.1 881609 D 323098 CDS YP_317411.1 75674990 3676072 complement(881869..882330) 1 NC_007406.1 phage cell wall peptidase, NlpC/P60 882330 3676072 Nwi_0794 Nitrobacter winogradskyi Nb-255 phage cell wall peptidase, NlpC/P60 YP_317411.1 881869 R 323098 CDS YP_317412.1 75674991 3676016 complement(882327..883214) 1 NC_007406.1 hypothetical protein 883214 3676016 Nwi_0795 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317412.1 882327 R 323098 CDS YP_317413.1 75674992 3676017 complement(883211..883801) 1 NC_007406.1 hypothetical protein 883801 3676017 Nwi_0796 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317413.1 883211 R 323098 CDS YP_317414.1 75674993 3676018 complement(883801..887148) 1 NC_007406.1 phage-related minor tail protein 887148 3676018 Nwi_0797 Nitrobacter winogradskyi Nb-255 phage-related minor tail protein YP_317414.1 883801 R 323098 CDS YP_317415.1 75674994 3676019 complement(887145..887291) 1 NC_007406.1 hypothetical protein 887291 3676019 Nwi_0798 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317415.1 887145 R 323098 CDS YP_317416.1 75674995 3676020 complement(887453..887809) 1 NC_007406.1 hypothetical protein 887809 3676020 Nwi_0799 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317416.1 887453 R 323098 CDS YP_317417.1 75674996 3676021 complement(887850..888791) 1 NC_007406.1 hypothetical protein 888791 3676021 Nwi_0800 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317417.1 887850 R 323098 CDS YP_317418.1 75674997 3676022 complement(888816..889250) 1 NC_007406.1 hypothetical protein 889250 3676022 Nwi_0801 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317418.1 888816 R 323098 CDS YP_317419.1 75674998 3676023 complement(889264..889941) 1 NC_007406.1 hypothetical protein 889941 3676023 Nwi_0802 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317419.1 889264 R 323098 CDS YP_317420.1 75674999 3676024 889963..890571 1 NC_007406.1 hypothetical protein 890571 3676024 Nwi_0803 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317420.1 889963 D 323098 CDS YP_317421.1 75675000 3676025 890583..890942 1 NC_007406.1 hypothetical protein 890942 3676025 Nwi_0804 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317421.1 890583 D 323098 CDS YP_317422.1 75675001 3676026 complement(890946..891263) 1 NC_007406.1 hypothetical protein 891263 3676026 Nwi_0805 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317422.1 890946 R 323098 CDS YP_317423.1 75675002 3676027 complement(891260..891610) 1 NC_007406.1 hypothetical protein 891610 3676027 Nwi_0806 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317423.1 891260 R 323098 CDS YP_317424.1 75675003 3676028 complement(891640..893709) 1 NC_007406.1 peptidase U35 893709 3676028 Nwi_0807 Nitrobacter winogradskyi Nb-255 peptidase U35 YP_317424.1 891640 R 323098 CDS YP_317425.1 75675004 3676029 complement(893727..895262) 1 NC_007406.1 Phage portal protein, lambda 895262 3676029 Nwi_0808 Nitrobacter winogradskyi Nb-255 Phage portal protein, lambda YP_317425.1 893727 R 323098 CDS YP_317426.1 75675005 3676030 complement(895262..895471) 1 NC_007406.1 hypothetical protein 895471 3676030 Nwi_0809 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317426.1 895262 R 323098 CDS YP_317427.1 75675006 3676031 complement(895490..897334) 1 NC_007406.1 phage terminase GpA 897334 3676031 Nwi_0810 Nitrobacter winogradskyi Nb-255 phage terminase GpA YP_317427.1 895490 R 323098 CDS YP_317428.1 75675007 3676032 complement(897282..897854) 1 NC_007406.1 hypothetical protein 897854 3676032 Nwi_0811 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317428.1 897282 R 323098 CDS YP_317429.1 75675008 3676033 897963..898211 1 NC_007406.1 hypothetical protein 898211 3676033 Nwi_0812 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317429.1 897963 D 323098 CDS YP_317430.1 75675009 3676034 898236..898694 1 NC_007406.1 hypothetical protein 898694 3676034 Nwi_0813 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317430.1 898236 D 323098 CDS YP_317431.1 75675010 3675996 complement(899224..899928) 1 NC_007406.1 hypothetical protein 899928 3675996 Nwi_0814 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317431.1 899224 R 323098 CDS YP_317432.1 75675011 3675997 complement(899925..900851) 1 NC_007406.1 hypothetical protein 900851 3675997 Nwi_0815 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317432.1 899925 R 323098 CDS YP_317433.1 75675012 3675998 complement(900844..901587) 1 NC_007406.1 ParB-like nuclease 901587 3675998 Nwi_0816 Nitrobacter winogradskyi Nb-255 ParB-like nuclease YP_317433.1 900844 R 323098 CDS YP_317434.1 75675013 3675999 complement(901990..902418) 1 NC_007406.1 hypothetical protein 902418 3675999 Nwi_0817 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317434.1 901990 R 323098 CDS YP_317435.1 75675014 3676000 complement(902415..902948) 1 NC_007406.1 hypothetical protein 902948 3676000 Nwi_0818 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317435.1 902415 R 323098 CDS YP_317436.1 75675015 3676001 complement(902963..903670) 1 NC_007406.1 hypothetical protein 903670 3676001 Nwi_0819 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317436.1 902963 R 323098 CDS YP_317437.1 75675016 3676002 complement(903885..906116) 1 NC_007406.1 ATPase 906116 3676002 Nwi_0820 Nitrobacter winogradskyi Nb-255 ATPase YP_317437.1 903885 R 323098 CDS YP_317438.1 75675017 3676003 complement(906196..906831) 1 NC_007406.1 hypothetical protein 906831 3676003 Nwi_0821 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317438.1 906196 R 323098 CDS YP_317439.1 75675018 3676004 complement(906873..907658) 1 NC_007406.1 hypothetical protein 907658 3676004 Nwi_0822 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317439.1 906873 R 323098 CDS YP_317440.1 75675019 3676005 complement(907655..907927) 1 NC_007406.1 hypothetical protein 907927 3676005 Nwi_0823 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317440.1 907655 R 323098 CDS YP_317441.1 75675020 3676006 complement(907924..908229) 1 NC_007406.1 hypothetical protein 908229 3676006 Nwi_0824 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317441.1 907924 R 323098 CDS YP_317442.1 75675021 3676007 908504..909250 1 NC_007406.1 hypothetical protein 909250 3676007 Nwi_0825 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317442.1 908504 D 323098 CDS YP_317443.1 75675022 3676008 909250..909540 1 NC_007406.1 XRE family transcriptional regulator 909540 3676008 Nwi_0826 Nitrobacter winogradskyi Nb-255 XRE family transcriptional regulator YP_317443.1 909250 D 323098 CDS YP_317444.1 75675023 3676009 909571..910206 1 NC_007406.1 hypothetical protein 910206 3676009 Nwi_0827 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317444.1 909571 D 323098 CDS YP_317445.1 75675024 3676010 complement(910233..910916) 1 NC_007406.1 hypothetical protein 910916 3676010 Nwi_0828 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317445.1 910233 R 323098 CDS YP_317446.1 75675025 3676011 complement(910873..911781) 1 NC_007406.1 SMF protein 911781 3676011 Nwi_0829 Nitrobacter winogradskyi Nb-255 SMF protein YP_317446.1 910873 R 323098 CDS YP_317447.1 75675026 3676012 complement(911937..912203) 1 NC_007406.1 XRE family transcriptional regulator 912203 3676012 Nwi_0830 Nitrobacter winogradskyi Nb-255 XRE family transcriptional regulator YP_317447.1 911937 R 323098 CDS YP_317448.1 75675027 3676013 complement(912285..913487) 1 NC_007406.1 Phage integrase 913487 3676013 Nwi_0831 Nitrobacter winogradskyi Nb-255 Phage integrase YP_317448.1 912285 R 323098 CDS YP_317449.1 75675028 3676014 complement(913692..914087) 1 NC_007406.1 hypothetical protein 914087 3676014 Nwi_0832 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317449.1 913692 R 323098 CDS YP_317450.1 75675029 3676015 complement(914089..915141) 1 NC_007406.1 cobyrinic acid a,c-diamide synthase 915141 3676015 Nwi_0833 Nitrobacter winogradskyi Nb-255 cobyrinic acid a,c-diamide synthase YP_317450.1 914089 R 323098 CDS YP_317451.1 75675030 3676275 complement(915690..916523) 1 NC_007406.1 recombinase 916523 3676275 Nwi_0834 Nitrobacter winogradskyi Nb-255 recombinase YP_317451.1 915690 R 323098 CDS YP_317452.1 75675031 3676277 complement(917155..917670) 1 NC_007406.1 N-acetyltransferase 917670 3676277 Nwi_0836 Nitrobacter winogradskyi Nb-255 N-acetyltransferase YP_317452.1 917155 R 323098 CDS YP_317453.1 75675032 3676278 complement(917658..917924) 1 NC_007406.1 hypothetical protein 917924 3676278 Nwi_0837 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317453.1 917658 R 323098 CDS YP_317454.1 75675033 3676279 918447..919307 1 NC_007406.1 integrase, catalytic region 919307 3676279 Nwi_0838 Nitrobacter winogradskyi Nb-255 integrase, catalytic region YP_317454.1 918447 D 323098 CDS YP_317455.1 75675034 3676280 919670..919930 1 NC_007406.1 hypothetical protein 919930 3676280 Nwi_0839 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317455.1 919670 D 323098 CDS YP_317456.1 75675035 3676281 920293..920607 1 NC_007406.1 hypothetical protein 920607 3676281 Nwi_0840 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317456.1 920293 D 323098 CDS YP_317457.1 75675036 3676282 920701..921204 1 NC_007406.1 hypothetical protein 921204 3676282 Nwi_0841 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317457.1 920701 D 323098 CDS YP_317458.1 75675037 3676283 921358..921723 1 NC_007406.1 ISBm1, transposase orfA 921723 3676283 Nwi_0842 Nitrobacter winogradskyi Nb-255 ISBm1, transposase orfA YP_317458.1 921358 D 323098 CDS YP_317459.1 75675038 3676284 complement(922284..922499) 1 NC_007406.1 XRE family transcriptional regulator 922499 3676284 Nwi_0843 Nitrobacter winogradskyi Nb-255 XRE family transcriptional regulator YP_317459.1 922284 R 323098 CDS YP_317460.1 75675039 3676285 922723..922989 1 NC_007406.1 hypothetical protein 922989 3676285 Nwi_0844 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317460.1 922723 D 323098 CDS YP_317461.1 75675040 3676286 923230..923472 1 NC_007406.1 hypothetical protein 923472 3676286 Nwi_0845 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317461.1 923230 D 323098 CDS YP_317462.1 75675041 3676287 923481..924344 1 NC_007406.1 replication protein A 924344 3676287 Nwi_0846 Nitrobacter winogradskyi Nb-255 replication protein A YP_317462.1 923481 D 323098 CDS YP_317463.1 75675042 3676288 924490..925248 1 NC_007406.1 DNA methylase N-4/N-6 925248 3676288 Nwi_0847 Nitrobacter winogradskyi Nb-255 DNA methylase N-4/N-6 YP_317463.1 924490 D 323098 CDS YP_317464.1 75675043 3676289 925417..925737 1 NC_007406.1 hypothetical protein 925737 3676289 Nwi_0848 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317464.1 925417 D 323098 CDS YP_317465.1 75675044 3676290 925734..926294 1 NC_007406.1 conjugal transfer protein precursor 926294 3676290 Nwi_0849 Nitrobacter winogradskyi Nb-255 conjugal transfer protein precursor YP_317465.1 925734 D 323098 CDS YP_317466.1 75675045 3676291 926329..927339 1 NC_007406.1 lytic transglycosylase, catalytic 927339 3676291 Nwi_0850 Nitrobacter winogradskyi Nb-255 lytic transglycosylase, catalytic YP_317466.1 926329 D 323098 CDS YP_317467.1 75675046 3676292 complement(927508..928149) 1 NC_007406.1 ISRm2011-2 transposase 928149 3676292 Nwi_0851 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_317467.1 927508 R 323098 CDS YP_317468.1 75675047 3676293 complement(928101..928451) 1 NC_007406.1 transposase 928451 3676293 Nwi_0852 Nitrobacter winogradskyi Nb-255 transposase YP_317468.1 928101 R 323098 CDS YP_317469.1 75675048 3676294 928579..929670 1 NC_007406.1 transposase IS116/IS110/IS902 929670 3676294 Nwi_0853 Nitrobacter winogradskyi Nb-255 transposase IS116/IS110/IS902 YP_317469.1 928579 D 323098 CDS YP_317470.1 75675049 3676295 929793..930581 1 NC_007406.1 hypothetical protein 930581 3676295 Nwi_0854 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317470.1 929793 D 323098 CDS YP_317471.1 75675050 3674857 930678..931334 1 NC_007406.1 hypothetical protein 931334 3674857 Nwi_0855 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317471.1 930678 D 323098 CDS YP_317472.1 75675051 3677198 931448..931702 1 NC_007406.1 prevent-host-death protein 931702 3677198 Nwi_0856 Nitrobacter winogradskyi Nb-255 prevent-host-death protein YP_317472.1 931448 D 323098 CDS YP_317473.1 75675052 3677199 931699..932121 1 NC_007406.1 twitching motility protein PilT 932121 3677199 Nwi_0857 Nitrobacter winogradskyi Nb-255 twitching motility protein PilT YP_317473.1 931699 D 323098 CDS YP_317474.1 75675053 3677200 932247..932909 1 NC_007406.1 TENA/THI-4 protein 932909 3677200 Nwi_0858 Nitrobacter winogradskyi Nb-255 TENA/THI-4 protein YP_317474.1 932247 D 323098 CDS YP_317475.1 75675054 3677201 932922..933407 1 NC_007406.1 hypothetical protein 933407 3677201 Nwi_0859 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317475.1 932922 D 323098 CDS YP_317476.1 75675055 3677202 933407..934615 1 NC_007406.1 conjugation TrbI-like protein 934615 3677202 Nwi_0860 Nitrobacter winogradskyi Nb-255 conjugation TrbI-like protein YP_317476.1 933407 D 323098 CDS YP_317477.1 75675056 3677203 934612..934839 1 NC_007406.1 hypothetical protein 934839 3677203 Nwi_0861 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317477.1 934612 D 323098 CDS YP_317478.1 75675057 3677204 935136..935624 1 NC_007406.1 Phage Gp37Gp68 935624 3677204 Nwi_0862 Nitrobacter winogradskyi Nb-255 Phage Gp37Gp68 YP_317478.1 935136 D 323098 CDS YP_317479.1 75675058 3677205 complement(935386..936057) 1 NC_007406.1 hypothetical protein 936057 3677205 Nwi_0863 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317479.1 935386 R 323098 CDS YP_317480.1 75675059 3674858 936674..937543 1 NC_007406.1 beta-lactamase-like protein 937543 3674858 Nwi_0864 Nitrobacter winogradskyi Nb-255 beta-lactamase-like protein YP_317480.1 936674 D 323098 CDS YP_317481.1 75675060 3674859 complement(937751..938731) 1 NC_007406.1 Fis family transcriptional regulator 938731 3674859 Nwi_0865 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_317481.1 937751 R 323098 CDS YP_317482.1 75675061 3674860 complement(938728..939102) 1 NC_007406.1 transposase IS3/IS911 939102 3674860 Nwi_0866 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_317482.1 938728 R 323098 CDS YP_317483.1 75675062 3674861 complement(939014..939706) 1 NC_007406.1 hypothetical protein 939706 3674861 Nwi_0867 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317483.1 939014 R 323098 CDS YP_317484.1 75675063 3674862 complement(939919..940689) 1 NC_007406.1 hypothetical protein 940689 3674862 Nwi_0868 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317484.1 939919 R 323098 CDS YP_317485.1 75675064 3674863 940869..941243 1 NC_007406.1 transposase IS3/IS911 941243 3674863 Nwi_0869 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_317485.1 940869 D 323098 CDS YP_317486.1 75675065 3674314 941240..942301 1 NC_007406.1 Fis family transcriptional regulator 942301 3674314 Nwi_0870 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_317486.1 941240 D 323098 CDS YP_317487.1 75675066 3674315 942213..942587 1 NC_007406.1 transposase IS3/IS911 942587 3674315 Nwi_0871 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_317487.1 942213 D 323098 CDS YP_317488.1 75675067 3674316 942584..943564 1 NC_007406.1 Fis family transcriptional regulator 943564 3674316 Nwi_0872 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_317488.1 942584 D 323098 CDS YP_317489.1 75675068 3674317 complement(944538..944762) 1 NC_007406.1 hypothetical protein 944762 3674317 Nwi_0873 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317489.1 944538 R 323098 CDS YP_317490.1 75675069 3674318 complement(944812..949281) 1 NC_007406.1 hypothetical protein 949281 3674318 Nwi_0874 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317490.1 944812 R 323098 CDS YP_317491.1 75675070 3674319 complement(949281..951314) 1 NC_007406.1 surface antigen (D15) 951314 3674319 Nwi_0875 Nitrobacter winogradskyi Nb-255 surface antigen (D15) YP_317491.1 949281 R 323098 CDS YP_317492.1 75675071 3674320 complement(951773..952837) 1 NC_007406.1 choloylglycine hydrolase 952837 3674320 Nwi_0876 Nitrobacter winogradskyi Nb-255 choloylglycine hydrolase YP_317492.1 951773 R 323098 CDS YP_317493.1 75675072 3674321 complement(953085..953642) 1 NC_007406.1 hypothetical protein 953642 3674321 Nwi_0877 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317493.1 953085 R 323098 CDS YP_317494.1 75675073 3674322 953933..954487 1 NC_007406.1 hypothetical protein 954487 3674322 Nwi_0878 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317494.1 953933 D 323098 CDS YP_317495.1 75675074 3674323 954772..955908 1 NC_007406.1 TonB-dependent receptor 955908 3674323 Nwi_0879 Nitrobacter winogradskyi Nb-255 TonB-dependent receptor YP_317495.1 954772 D 323098 CDS YP_317496.1 75675075 3674324 955905..956762 1 NC_007406.1 molybdate ABC transporter periplasmic molybdate-binding protein 956762 3674324 Nwi_0880 Nitrobacter winogradskyi Nb-255 molybdate ABC transporter periplasmic molybdate-binding protein YP_317496.1 955905 D 323098 CDS YP_317497.1 75675076 3674325 complement(957163..958599) 1 NC_007406.1 GntR family transcriptional regulator 958599 3674325 Nwi_0881 Nitrobacter winogradskyi Nb-255 GntR family transcriptional regulator YP_317497.1 957163 R 323098 CDS YP_317498.1 75675077 3674326 958862..959641 1 NC_007406.1 class II aldolase/adducin domain-containing protein 959641 3674326 Nwi_0882 Nitrobacter winogradskyi Nb-255 class II aldolase/adducin domain-containing protein YP_317498.1 958862 D 323098 CDS YP_317499.1 75675078 3674327 959684..960568 1 NC_007406.1 dihydrodipicolinate synthetase 960568 3674327 Nwi_0883 Nitrobacter winogradskyi Nb-255 dihydrodipicolinate synthetase YP_317499.1 959684 D 323098 CDS YP_317500.1 75675079 3674328 complement(960829..962349) 1 NC_007406.1 hypothetical protein 962349 3674328 Nwi_0884 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317500.1 960829 R 323098 CDS YP_317501.1 75675080 3674329 complement(962444..964036) 1 NC_007406.1 hypothetical protein 964036 3674329 Nwi_0885 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317501.1 962444 R 323098 CDS YP_317502.1 75675081 3674330 complement(964039..965652) 1 NC_007406.1 hypothetical protein 965652 3674330 Nwi_0886 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317502.1 964039 R 323098 CDS YP_317503.1 75675082 3674331 complement(965707..966957) 1 NC_007406.1 hypothetical protein 966957 3674331 Nwi_0887 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317503.1 965707 R 323098 CDS YP_317504.1 75675083 3674332 967400..967585 1 NC_007406.1 outer membrane ferric siderophore receptor 967585 3674332 Nwi_0888 Nitrobacter winogradskyi Nb-255 outer membrane ferric siderophore receptor YP_317504.1 967400 D 323098 CDS YP_317505.1 75675084 3674333 complement(967844..969508) 1 NC_007406.1 hypothetical protein 969508 3674333 Nwi_0889 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317505.1 967844 R 323098 CDS YP_317506.1 75675085 3674334 complement(969550..970437) 1 NC_007406.1 beta-lactamase-like protein 970437 3674334 Nwi_0890 Nitrobacter winogradskyi Nb-255 beta-lactamase-like protein YP_317506.1 969550 R 323098 CDS YP_317507.1 75675086 3674335 970777..971415 1 NC_007406.1 alkyl hydroperoxide reductase 971415 3674335 Nwi_0891 Nitrobacter winogradskyi Nb-255 alkyl hydroperoxide reductase YP_317507.1 970777 D 323098 CDS YP_317508.1 75675087 3674336 971412..971807 1 NC_007406.1 ArsR family transcriptional regulator 971807 3674336 Nwi_0892 Nitrobacter winogradskyi Nb-255 ArsR family transcriptional regulator YP_317508.1 971412 D 323098 CDS YP_317509.1 75675088 3674337 complement(971908..972351) 1 NC_007406.1 hypothetical protein 972351 3674337 Nwi_0893 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317509.1 971908 R 323098 CDS YP_317510.1 75675089 3674338 972786..973283 1 NC_007406.1 ECF subfamily RNA polymerase sigma-24 factor 973283 3674338 Nwi_0894 Nitrobacter winogradskyi Nb-255 ECF subfamily RNA polymerase sigma-24 factor YP_317510.1 972786 D 323098 CDS YP_317511.1 75675090 3674339 973483..974445 1 NC_007406.1 FecR protein 974445 3674339 Nwi_0895 Nitrobacter winogradskyi Nb-255 FecR protein YP_317511.1 973483 D 323098 CDS YP_317512.1 75675091 3674340 974569..975018 1 NC_007406.1 TonB-dependent receptor 975018 3674340 Nwi_0896 Nitrobacter winogradskyi Nb-255 TonB-dependent receptor YP_317512.1 974569 D 323098 CDS YP_317513.1 75675092 3674341 974988..976529 1 NC_007406.1 hypothetical protein 976529 3674341 Nwi_0897 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317513.1 974988 D 323098 CDS YP_317514.1 75675093 3674342 976580..977608 1 NC_007406.1 NAD-dependent epimerase/dehydratase 977608 3674342 Nwi_0898 Nitrobacter winogradskyi Nb-255 NAD-dependent epimerase/dehydratase YP_317514.1 976580 D 323098 CDS YP_317515.1 75675094 3674345 981530..981799 1 NC_007406.1 hypothetical protein 981799 3674345 Nwi_0901 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317515.1 981530 D 323098 CDS YP_317516.1 75675095 3674346 complement(981759..982211) 1 NC_007406.1 hypothetical protein 982211 3674346 Nwi_0902 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317516.1 981759 R 323098 CDS YP_317517.1 75675096 3674347 982432..982746 1 NC_007406.1 hypothetical protein 982746 3674347 Nwi_0903 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317517.1 982432 D 323098 CDS YP_317518.1 75675097 3674348 complement(982843..984339) 1 NC_007406.1 hypothetical protein 984339 3674348 Nwi_0904 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317518.1 982843 R 323098 CDS YP_317519.1 75675098 3674349 complement(984742..985077) 1 NC_007406.1 hypothetical protein 985077 3674349 Nwi_0905 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317519.1 984742 R 323098 CDS YP_317520.1 75675099 3674350 986729..987157 1 NC_007406.1 cupin 987157 3674350 Nwi_0906 Nitrobacter winogradskyi Nb-255 cupin YP_317520.1 986729 D 323098 CDS YP_317521.1 75675100 3674351 complement(987283..989904) 1 NC_007406.1 hypothetical protein 989904 3674351 Nwi_0907 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317521.1 987283 R 323098 CDS YP_317522.1 75675101 3674352 complement(989901..991025) 1 NC_007406.1 exonuclease SbcD 991025 3674352 Nwi_0908 Nitrobacter winogradskyi Nb-255 exonuclease SbcD YP_317522.1 989901 R 323098 CDS YP_317523.1 75675102 3674371 complement(991028..997036) 1 NC_007406.1 DNA helicase 997036 3674371 Nwi_0909 Nitrobacter winogradskyi Nb-255 DNA helicase YP_317523.1 991028 R 323098 CDS YP_317524.1 75675103 3674372 complement(997300..997575) 1 NC_007406.1 hypothetical protein 997575 3674372 Nwi_0910 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317524.1 997300 R 323098 CDS YP_317525.1 75675104 3674373 997630..1000125 1 NC_007406.1 heavy metal translocating P-type ATPase 1000125 3674373 Nwi_0911 Nitrobacter winogradskyi Nb-255 heavy metal translocating P-type ATPase YP_317525.1 997630 D 323098 CDS YP_317526.1 75675105 3674374 complement(1000183..1000620) 1 NC_007406.1 hypothetical protein 1000620 3674374 Nwi_0912 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317526.1 1000183 R 323098 CDS YP_317527.1 75675106 3674375 1001153..1001758 1 NC_007406.1 manganese and iron superoxide dismutase 1001758 3674375 Nwi_0913 Nitrobacter winogradskyi Nb-255 manganese and iron superoxide dismutase YP_317527.1 1001153 D 323098 CDS YP_317528.1 75675107 3674376 1002119..1002874 1 NC_007406.1 ABC transporter ATPase 1002874 3674376 Nwi_0914 Nitrobacter winogradskyi Nb-255 ABC transporter ATPase YP_317528.1 1002119 D 323098 CDS YP_317529.1 75675108 3674377 1002881..1003750 1 NC_007406.1 Mn2+/Zn2+ ABC transporter permease 1003750 3674377 Nwi_0915 Nitrobacter winogradskyi Nb-255 Mn2+/Zn2+ ABC transporter permease YP_317529.1 1002881 D 323098 CDS YP_317530.1 75675109 3674378 1003764..1004687 1 NC_007406.1 periplasmic solute binding protein 1004687 3674378 Nwi_0916 Nitrobacter winogradskyi Nb-255 periplasmic solute binding protein YP_317530.1 1003764 D 323098 CDS YP_317531.1 75675110 3674379 1004812..1005864 1 NC_007406.1 cobalamin synthesis protein CobW 1005864 3674379 Nwi_0917 Nitrobacter winogradskyi Nb-255 cobalamin synthesis protein CobW YP_317531.1 1004812 D 323098 CDS YP_317532.1 75675111 3674380 1005864..1006877 1 NC_007406.1 hypothetical protein 1006877 3674380 Nwi_0918 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317532.1 1005864 D 323098 CDS YP_317533.1 75675112 3674381 complement(1006874..1007137) 1 NC_007406.1 hypothetical protein 1007137 3674381 Nwi_0919 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317533.1 1006874 R 323098 CDS YP_317534.1 75675113 3674382 1007187..1007459 1 NC_007406.1 hypothetical protein 1007459 3674382 Nwi_0920 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317534.1 1007187 D 323098 CDS YP_317535.1 75675114 3674383 complement(1007820..1009256) 1 NC_007406.1 homospermidine synthase 1009256 3674383 Nwi_0921 Nitrobacter winogradskyi Nb-255 homospermidine synthase YP_317535.1 1007820 R 323098 CDS YP_317536.1 75675115 3674384 complement(1009808..1010263) 1 NC_007406.1 transcription elongation factor GreA/GreB region 1010263 3674384 Nwi_0922 Nitrobacter winogradskyi Nb-255 transcription elongation factor GreA/GreB region YP_317536.1 1009808 R 323098 CDS YP_317537.1 75675116 3674385 complement(1010612..1011211) 1 NC_007406.1 N-acetyltransferase 1011211 3674385 Nwi_0923 Nitrobacter winogradskyi Nb-255 N-acetyltransferase YP_317537.1 1010612 R 323098 CDS YP_317538.1 75675117 3674386 complement(1011346..1012488) 1 NC_007406.1 Orn/DAP/Arg decarboxylase 2 1012488 3674386 Nwi_0924 Nitrobacter winogradskyi Nb-255 Orn/DAP/Arg decarboxylase 2 YP_317538.1 1011346 R 323098 CDS YP_317539.1 75675118 3674387 complement(1013162..1013422) 1 NC_007406.1 hypothetical protein 1013422 3674387 Nwi_0925 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317539.1 1013162 R 323098 CDS YP_317540.1 75675119 3674388 1013607..1015685 1 NC_007406.1 peptidase M3A and M3B, thimet/oligopeptidase F 1015685 3674388 Nwi_0926 Nitrobacter winogradskyi Nb-255 peptidase M3A and M3B, thimet/oligopeptidase F YP_317540.1 1013607 D 323098 CDS YP_317541.1 75675120 3674389 complement(1015837..1016235) 1 NC_007406.1 hypothetical protein 1016235 3674389 Nwi_0927 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317541.1 1015837 R 323098 CDS YP_317542.1 75675121 3674390 1016317..1017360 1 NC_007406.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 1017360 hemH 3674390 hemH Nitrobacter winogradskyi Nb-255 ferrochelatase YP_317542.1 1016317 D 323098 CDS YP_317543.1 75675122 3674391 1017580..1018578 1 NC_007406.1 Band 7 protein 1018578 3674391 Nwi_0929 Nitrobacter winogradskyi Nb-255 Band 7 protein YP_317543.1 1017580 D 323098 CDS YP_317544.1 75675123 3674392 1018602..1019048 1 NC_007406.1 hypothetical protein 1019048 3674392 Nwi_0930 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317544.1 1018602 D 323098 CDS YP_317545.1 75675124 3674929 complement(1019065..1020042) 1 NC_007406.1 sugar isomerase, KpsF/GutQ family protein 1020042 3674929 Nwi_0931 Nitrobacter winogradskyi Nb-255 sugar isomerase, KpsF/GutQ family protein YP_317545.1 1019065 R 323098 CDS YP_317546.1 75675125 3674930 1020371..1022062 1 NC_007406.1 hypothetical protein 1022062 3674930 Nwi_0932 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317546.1 1020371 D 323098 CDS YP_317547.1 75675126 3674931 complement(1022129..1022692) 1 NC_007406.1 hypothetical protein 1022692 3674931 Nwi_0933 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317547.1 1022129 R 323098 CDS YP_317548.1 75675127 3674932 complement(1022952..1023356) 1 NC_007406.1 LysR family transcriptional regulator 1023356 3674932 Nwi_0934 Nitrobacter winogradskyi Nb-255 LysR family transcriptional regulator YP_317548.1 1022952 R 323098 CDS YP_317549.1 75675128 3674933 complement(1023424..1025961) 1 NC_007406.1 MscS mechanosensitive ion channel 1025961 3674933 Nwi_0935 Nitrobacter winogradskyi Nb-255 MscS mechanosensitive ion channel YP_317549.1 1023424 R 323098 CDS YP_317550.1 75675129 3674934 1026441..1026716 1 NC_007406.1 hypothetical protein 1026716 3674934 Nwi_0936 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317550.1 1026441 D 323098 CDS YP_317551.1 75675130 3674935 1026845..1028074 1 NC_007406.1 pigment protein 1028074 3674935 Nwi_0937 Nitrobacter winogradskyi Nb-255 pigment protein YP_317551.1 1026845 D 323098 CDS YP_317552.1 75675131 3674936 1028083..1028625 1 NC_007406.1 flavin reductase-like, FMN-binding 1028625 3674936 Nwi_0938 Nitrobacter winogradskyi Nb-255 flavin reductase-like, FMN-binding YP_317552.1 1028083 D 323098 CDS YP_317553.1 75675132 3674937 1028790..1030010 1 NC_007406.1 hypothetical protein 1030010 3674937 Nwi_0939 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317553.1 1028790 D 323098 CDS YP_317554.1 75675133 3674938 1030184..1031236 1 NC_007406.1 hypothetical protein 1031236 3674938 Nwi_0940 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317554.1 1030184 D 323098 CDS YP_317555.1 75675134 3674939 1031582..1033732 1 NC_007406.1 TonB-dependent receptor 1033732 3674939 Nwi_0941 Nitrobacter winogradskyi Nb-255 TonB-dependent receptor YP_317555.1 1031582 D 323098 CDS YP_317556.1 75675135 3674940 1033918..1034451 1 NC_007406.1 hypothetical protein 1034451 3674940 Nwi_0942 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317556.1 1033918 D 323098 CDS YP_317557.1 75675136 3674941 1034534..1035460 1 NC_007406.1 di-heme cytochrome c peroxidase 1035460 3674941 Nwi_0943 Nitrobacter winogradskyi Nb-255 di-heme cytochrome c peroxidase YP_317557.1 1034534 D 323098 CDS YP_317558.1 75675137 3674942 complement(1035627..1036067) 1 NC_007406.1 hypothetical protein 1036067 3674942 Nwi_0944 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317558.1 1035627 R 323098 CDS YP_317559.1 75675138 3674943 1036226..1037743 1 NC_007406.1 hypothetical protein 1037743 3674943 Nwi_0945 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317559.1 1036226 D 323098 CDS YP_317560.1 75675139 3674944 1037949..1040795 1 NC_007406.1 alpha amylase 1040795 3674944 Nwi_0946 Nitrobacter winogradskyi Nb-255 alpha amylase YP_317560.1 1037949 D 323098 CDS YP_317561.1 75675140 3674945 1040956..1041177 1 NC_007406.1 hypothetical protein 1041177 3674945 Nwi_0947 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317561.1 1040956 D 323098 CDS YP_317562.1 75675141 3674965 complement(1041603..1041842) 1 NC_007406.1 hypothetical protein 1041842 3674965 Nwi_0948 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317562.1 1041603 R 323098 CDS YP_317563.1 75675142 3674966 1041842..1042651 1 NC_007406.1 aspartate/glutamate/uridylate kinase 1042651 3674966 Nwi_0949 Nitrobacter winogradskyi Nb-255 aspartate/glutamate/uridylate kinase YP_317563.1 1041842 D 323098 CDS YP_317564.1 75675143 3674967 1042664..1043497 1 NC_007406.1 aspartate/glutamate/uridylate kinase 1043497 3674967 Nwi_0950 Nitrobacter winogradskyi Nb-255 aspartate/glutamate/uridylate kinase YP_317564.1 1042664 D 323098 CDS YP_317565.1 75675144 3674968 complement(1043589..1045706) 1 NC_007406.1 para-aminobenzoate synthase, component I 1045706 3674968 Nwi_0951 Nitrobacter winogradskyi Nb-255 para-aminobenzoate synthase, component I YP_317565.1 1043589 R 323098 CDS YP_317566.1 75675145 3674969 1046030..1046824 1 NC_007406.1 universal stress protein UspA 1046824 3674969 Nwi_0952 Nitrobacter winogradskyi Nb-255 universal stress protein UspA YP_317566.1 1046030 D 323098 CDS YP_317567.1 75675146 3674970 complement(1047028..1047333) 1 NC_007406.1 hypothetical protein 1047333 3674970 Nwi_0953 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317567.1 1047028 R 323098 CDS YP_317568.1 75675147 3674971 1047904..1048620 1 NC_007406.1 ISRm2011-2 transposase 1048620 3674971 Nwi_0954 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_317568.1 1047904 D 323098 CDS YP_317569.1 75675148 3674972 complement(1048623..1049339) 1 NC_007406.1 hypothetical protein 1049339 3674972 Nwi_0955 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317569.1 1048623 R 323098 CDS YP_317570.1 75675149 3674973 complement(1049545..1049829) 1 NC_007406.1 hypothetical protein 1049829 3674973 Nwi_0956 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317570.1 1049545 R 323098 CDS YP_317571.1 75675150 3674974 complement(1050572..1051600) 1 NC_007406.1 LuxR family transcriptional regulator 1051600 3674974 Nwi_0957 Nitrobacter winogradskyi Nb-255 LuxR family transcriptional regulator YP_317571.1 1050572 R 323098 CDS YP_317572.1 75675151 3674975 complement(1051814..1052353) 1 NC_007406.1 hypothetical protein 1052353 3674975 Nwi_0958 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317572.1 1051814 R 323098 CDS YP_317573.1 75675152 3674976 1052540..1053124 1 NC_007406.1 hypothetical protein 1053124 3674976 Nwi_0959 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317573.1 1052540 D 323098 CDS YP_317574.1 75675153 3674977 1053359..1054243 1 NC_007406.1 hypothetical protein 1054243 3674977 Nwi_0960 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317574.1 1053359 D 323098 CDS YP_317575.1 75675154 3674978 1054376..1056298 1 NC_007406.1 hypothetical protein 1056298 3674978 Nwi_0961 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317575.1 1054376 D 323098 CDS YP_317576.1 75675155 3674979 1056343..1058349 1 NC_007406.1 type I secretion system ATPase, PrtD 1058349 3674979 Nwi_0962 Nitrobacter winogradskyi Nb-255 type I secretion system ATPase, PrtD YP_317576.1 1056343 D 323098 CDS YP_317577.1 75675156 3674980 1058387..1059730 1 NC_007406.1 type I secretion membrane fusion protein, HlyD 1059730 3674980 Nwi_0963 Nitrobacter winogradskyi Nb-255 type I secretion membrane fusion protein, HlyD YP_317577.1 1058387 D 323098 CDS YP_317578.1 75675157 3674981 1059788..1061308 1 NC_007406.1 TPR and WD-40 repeat-containing protein 1061308 3674981 Nwi_0964 Nitrobacter winogradskyi Nb-255 TPR and WD-40 repeat-containing protein YP_317578.1 1059788 D 323098 CDS YP_317579.1 75675158 3674982 complement(1061550..1063091) 1 NC_007406.1 nitrate reductase subunit beta 1063091 3674982 Nwi_0965 Nitrobacter winogradskyi Nb-255 nitrate reductase subunit beta YP_317579.1 1061550 R 323098 CDS YP_317580.1 75675159 3674983 complement(1063391..1064173) 1 NC_007406.1 hypothetical protein 1064173 3674983 Nwi_0966 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317580.1 1063391 R 323098 CDS YP_317581.1 75675160 3674984 1064401..1064817 1 NC_007406.1 hypothetical protein 1064817 3674984 Nwi_0967 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317581.1 1064401 D 323098 CDS YP_317582.1 75675161 3675004 complement(1064910..1066454) 1 NC_007406.1 tyrosinase 1066454 3675004 Nwi_0968 Nitrobacter winogradskyi Nb-255 tyrosinase YP_317582.1 1064910 R 323098 CDS YP_317583.1 75675162 3675005 1066719..1067429 1 NC_007406.1 hypothetical protein 1067429 3675005 Nwi_0969 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317583.1 1066719 D 323098 CDS YP_317584.1 75675163 3675006 complement(1067621..1067851) 1 NC_007406.1 hypothetical protein 1067851 3675006 Nwi_0970 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317584.1 1067621 R 323098 CDS YP_317585.1 75675164 3675007 1068251..1068790 1 NC_007406.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 1068790 3675007 Nwi_0971 Nitrobacter winogradskyi Nb-255 methionine sulfoxide reductase A YP_317585.1 1068251 D 323098 CDS YP_317586.1 75675165 3675008 1068877..1069275 1 NC_007406.1 transposase 1069275 3675008 Nwi_0972 Nitrobacter winogradskyi Nb-255 transposase YP_317586.1 1068877 D 323098 CDS YP_317587.1 75675166 3675009 1069290..1069658 1 NC_007406.1 transposase, IS4 1069658 3675009 Nwi_0973 Nitrobacter winogradskyi Nb-255 transposase, IS4 YP_317587.1 1069290 D 323098 CDS YP_317588.1 75675167 3675010 complement(1069775..1070431) 1 NC_007406.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 1070431 mobA 3675010 mobA Nitrobacter winogradskyi Nb-255 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_317588.1 1069775 R 323098 CDS YP_317589.1 75675168 3675011 1070561..1070866 1 NC_007406.1 SirA-like protein 1070866 3675011 Nwi_0975 Nitrobacter winogradskyi Nb-255 SirA-like protein YP_317589.1 1070561 D 323098 CDS YP_317590.1 75675169 3675012 complement(1071056..1071772) 1 NC_007406.1 ISRm2011-2 transposase 1071772 3675012 Nwi_0976 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_317590.1 1071056 R 323098 CDS YP_317591.1 75675170 3675013 complement(1072081..1073058) 1 NC_007406.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 1073058 hemE 3675013 hemE Nitrobacter winogradskyi Nb-255 uroporphyrinogen decarboxylase YP_317591.1 1072081 R 323098 CDS YP_317592.1 75675171 3675014 complement(1073296..1073895) 1 NC_007406.1 stationary phase that binds TrpR repressor; TrpR binding protein WrbA 1073895 3675014 Nwi_0978 Nitrobacter winogradskyi Nb-255 TrpR binding protein WrbA YP_317592.1 1073296 R 323098 CDS YP_317593.1 75675172 3675015 complement(1073970..1074668) 1 NC_007406.1 pirin 1074668 3675015 Nwi_0979 Nitrobacter winogradskyi Nb-255 pirin YP_317593.1 1073970 R 323098 CDS YP_317594.1 75675173 3675016 1074831..1075745 1 NC_007406.1 LysR family transcriptional regulator 1075745 3675016 Nwi_0980 Nitrobacter winogradskyi Nb-255 LysR family transcriptional regulator YP_317594.1 1074831 D 323098 CDS YP_317595.1 75675174 3675017 1075955..1076239 1 NC_007406.1 hypothetical protein 1076239 3675017 Nwi_0981 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317595.1 1075955 D 323098 CDS YP_317596.1 75675175 3674403 complement(1076270..1077484) 1 NC_007406.1 diguanylate phophodiesterase 1077484 3674403 Nwi_0982 Nitrobacter winogradskyi Nb-255 diguanylate phophodiesterase YP_317596.1 1076270 R 323098 CDS YP_317597.1 75675176 3674404 1077822..1077947 1 NC_007406.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 1077947 rpmJ 3674404 rpmJ Nitrobacter winogradskyi Nb-255 50S ribosomal protein L36 YP_317597.1 1077822 D 323098 CDS YP_317598.1 75675177 3674405 1078278..1078943 1 NC_007406.1 TPR repeat-containing protein 1078943 3674405 Nwi_0984 Nitrobacter winogradskyi Nb-255 TPR repeat-containing protein YP_317598.1 1078278 D 323098 CDS YP_317599.1 75675178 3674406 complement(1079215..1079520) 1 NC_007406.1 hypothetical protein 1079520 3674406 Nwi_0985 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317599.1 1079215 R 323098 CDS YP_317600.1 75675179 3674407 complement(1079737..1081173) 1 NC_007406.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 1081173 3674407 Nwi_0986 Nitrobacter winogradskyi Nb-255 pyruvate kinase YP_317600.1 1079737 R 323098 CDS YP_317601.1 75675180 3674855 complement(1081170..1081754) 1 NC_007406.1 hypothetical protein 1081754 3674855 Nwi_0987 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317601.1 1081170 R 323098 CDS YP_317602.1 75675181 3674856 1081937..1082239 1 NC_007406.1 hypothetical protein 1082239 3674856 Nwi_0988 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317602.1 1081937 D 323098 CDS YP_317603.1 75675182 3674395 1082412..1082681 1 NC_007406.1 hypothetical protein 1082681 3674395 Nwi_0989 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317603.1 1082412 D 323098 CDS YP_317604.1 75675183 3674396 complement(1082980..1084569) 1 NC_007406.1 hypothetical protein 1084569 3674396 Nwi_0990 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317604.1 1082980 R 323098 CDS YP_317605.1 75675184 3674397 complement(1084847..1087282) 1 NC_007406.1 hypothetical protein 1087282 3674397 Nwi_0991 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317605.1 1084847 R 323098 CDS YP_317606.1 75675185 3674398 complement(1087575..1089071) 1 NC_007406.1 Fis family transcriptional regulator 1089071 3674398 Nwi_0992 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_317606.1 1087575 R 323098 CDS YP_317607.1 75675186 3674399 1089251..1091128 1 NC_007406.1 peptidase M3B, oligoendopeptidase-related clade 3 1091128 3674399 Nwi_0993 Nitrobacter winogradskyi Nb-255 peptidase M3B, oligoendopeptidase-related clade 3 YP_317607.1 1089251 D 323098 CDS YP_317608.1 75675187 3674400 1091528..1091680 1 NC_007406.1 hypothetical protein 1091680 3674400 Nwi_0994 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317608.1 1091528 D 323098 CDS YP_317609.1 75675188 3676205 1091776..1092906 1 NC_007406.1 alanine dehydrogenase 1092906 3676205 Nwi_0995 Nitrobacter winogradskyi Nb-255 alanine dehydrogenase YP_317609.1 1091776 D 323098 CDS YP_317610.1 75675189 3676206 1093024..1093341 1 NC_007406.1 NAD(P) transhydrogenase subunit alpha 1093341 3676206 Nwi_0996 Nitrobacter winogradskyi Nb-255 NAD(P) transhydrogenase subunit alpha YP_317610.1 1093024 D 323098 CDS YP_317611.1 75675190 3676207 1093500..1094897 1 NC_007406.1 NAD/NADP transhydrogenase beta subunit 1094897 3676207 Nwi_0997 Nitrobacter winogradskyi Nb-255 NAD/NADP transhydrogenase beta subunit YP_317611.1 1093500 D 323098 CDS YP_317612.1 75675191 3676208 1094927..1095394 1 NC_007406.1 hypothetical protein 1095394 3676208 Nwi_0998 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317612.1 1094927 D 323098 CDS YP_317613.1 75675192 3676209 complement(1095758..1096045) 1 NC_007406.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 1096045 rpsU 3676209 rpsU Nitrobacter winogradskyi Nb-255 30S ribosomal protein S21 YP_317613.1 1095758 R 323098 CDS YP_317614.1 75675193 3676210 1096310..1097026 1 NC_007406.1 porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; aquaporin Z 1097026 3676210 Nwi_1000 Nitrobacter winogradskyi Nb-255 aquaporin Z YP_317614.1 1096310 D 323098 CDS YP_317615.1 75675194 3676211 complement(1097140..1098252) 1 NC_007406.1 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 1098252 3676211 Nwi_1001 Nitrobacter winogradskyi Nb-255 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_317615.1 1097140 R 323098 CDS YP_317616.1 75675195 3676212 complement(1098249..1098737) 1 NC_007406.1 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase 1098737 3676212 Nwi_1002 Nitrobacter winogradskyi Nb-255 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase YP_317616.1 1098249 R 323098 CDS YP_317617.1 75675196 3676213 complement(1098926..1099249) 1 NC_007406.1 hypothetical protein 1099249 3676213 Nwi_1003 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317617.1 1098926 R 323098 CDS YP_317618.1 75675197 3676214 1099368..1099553 1 NC_007406.1 hypothetical protein 1099553 3676214 Nwi_1004 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317618.1 1099368 D 323098 CDS YP_317619.1 75675198 3676215 complement(1099662..1100768) 1 NC_007406.1 FAD dependent oxidoreductase 1100768 3676215 Nwi_1005 Nitrobacter winogradskyi Nb-255 FAD dependent oxidoreductase YP_317619.1 1099662 R 323098 CDS YP_317620.1 75675199 3676216 1101201..1102349 1 NC_007406.1 spermidine/putrescine ABC transporter ATP-binding subunit 1102349 3676216 Nwi_1006 Nitrobacter winogradskyi Nb-255 spermidine/putrescine ABC transporter ATP-binding subunit YP_317620.1 1101201 D 323098 CDS YP_317621.1 75675200 3677233 1102346..1103260 1 NC_007406.1 binding-protein dependent transport system inner membrane protein 1103260 3677233 Nwi_1007 Nitrobacter winogradskyi Nb-255 binding-protein dependent transport system inner membrane protein YP_317621.1 1102346 D 323098 CDS YP_317622.1 75675201 3677234 1103257..1104078 1 NC_007406.1 binding-protein dependent transport system inner membrane protein 1104078 3677234 Nwi_1008 Nitrobacter winogradskyi Nb-255 binding-protein dependent transport system inner membrane protein YP_317622.1 1103257 D 323098 CDS YP_317623.1 75675202 3677235 complement(1104130..1106100) 1 NC_007406.1 hypothetical protein 1106100 3677235 Nwi_1009 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317623.1 1104130 R 323098 CDS YP_317624.1 75675203 3677236 1106113..1107102 1 NC_007406.1 coenzyme A transferase 1107102 3677236 Nwi_1010 Nitrobacter winogradskyi Nb-255 coenzyme A transferase YP_317624.1 1106113 D 323098 CDS YP_317625.1 75675204 3677237 1107156..1107806 1 NC_007406.1 coenzyme A transferase 1107806 3677237 Nwi_1011 Nitrobacter winogradskyi Nb-255 coenzyme A transferase YP_317625.1 1107156 D 323098 CDS YP_317626.1 75675205 3677238 complement(1107881..1110898) 1 NC_007406.1 Signal transduction histidine kinase 1110898 3677238 Nwi_1012 Nitrobacter winogradskyi Nb-255 Signal transduction histidine kinase YP_317626.1 1107881 R 323098 CDS YP_317627.1 75675206 3677239 1111161..1111541 1 NC_007406.1 hypothetical protein 1111541 3677239 Nwi_1013 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317627.1 1111161 D 323098 CDS YP_317628.1 75675207 3677240 1111722..1112168 1 NC_007406.1 phasin 2 1112168 3677240 Nwi_1014 Nitrobacter winogradskyi Nb-255 phasin 2 YP_317628.1 1111722 D 323098 CDS YP_317629.1 75675208 3674864 complement(1112417..1112947) 1 NC_007406.1 transposase, IS4 1112947 3674864 Nwi_1015 Nitrobacter winogradskyi Nb-255 transposase, IS4 YP_317629.1 1112417 R 323098 CDS YP_317630.1 75675209 3674416 1114074..1114790 1 NC_007406.1 ISRm2011-2 transposase 1114790 3674416 Nwi_1016 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_317630.1 1114074 D 323098 CDS YP_317631.1 75675210 3676686 1115122..1115496 1 NC_007406.1 transposase IS3/IS911 1115496 3676686 Nwi_1017 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_317631.1 1115122 D 323098 CDS YP_317632.1 75675211 3676687 1115493..1116473 1 NC_007406.1 Fis family transcriptional regulator 1116473 3676687 Nwi_1018 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_317632.1 1115493 D 323098 CDS YP_317633.1 75675212 3676688 complement(1117111..1117638) 1 NC_007406.1 hypothetical protein 1117638 3676688 Nwi_1019 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317633.1 1117111 R 323098 CDS YP_317634.1 75675213 3676689 1118547..1118798 1 NC_007406.1 hypothetical protein 1118798 3676689 Nwi_1020 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317634.1 1118547 D 323098 CDS YP_317635.1 75675214 3676690 1118931..1119107 1 NC_007406.1 hypothetical protein 1119107 3676690 Nwi_1021 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317635.1 1118931 D 323098 CDS YP_317636.1 75675215 3676691 complement(1119178..1119492) 1 NC_007406.1 hypothetical protein 1119492 3676691 Nwi_1022 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317636.1 1119178 R 323098 CDS YP_317637.1 75675216 3676692 complement(1119937..1120668) 1 NC_007406.1 hypothetical protein 1120668 3676692 Nwi_1023 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317637.1 1119937 R 323098 CDS YP_317638.1 75675217 3674875 1120814..1121653 1 NC_007406.1 universal stress protein UspA 1121653 3674875 Nwi_1024 Nitrobacter winogradskyi Nb-255 universal stress protein UspA YP_317638.1 1120814 D 323098 CDS YP_317639.1 75675218 3674876 1121750..1122727 1 NC_007406.1 glucokinase 1122727 3674876 Nwi_1025 Nitrobacter winogradskyi Nb-255 glucokinase YP_317639.1 1121750 D 323098 CDS YP_317640.1 75675219 3674877 complement(1122828..1123007) 1 NC_007406.1 phosphoketolase 1123007 3674877 Nwi_1026 Nitrobacter winogradskyi Nb-255 phosphoketolase YP_317640.1 1122828 R 323098 CDS YP_317641.1 75675220 3674878 complement(1123248..1123655) 1 NC_007406.1 response regulator receiver 1123655 3674878 Nwi_1027 Nitrobacter winogradskyi Nb-255 response regulator receiver YP_317641.1 1123248 R 323098 CDS YP_317642.1 75675221 3674879 complement(1123727..1124344) 1 NC_007406.1 response regulator for histidine kinase FixL; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes; response regulator FixJ 1124344 fixJ 3674879 fixJ Nitrobacter winogradskyi Nb-255 response regulator FixJ YP_317642.1 1123727 R 323098 CDS YP_317643.1 75675222 3674880 complement(1124334..1125869) 1 NC_007406.1 Signal transduction histidine kinase 1125869 3674880 Nwi_1029 Nitrobacter winogradskyi Nb-255 Signal transduction histidine kinase YP_317643.1 1124334 R 323098 CDS YP_317644.1 75675223 3674881 complement(1126096..1126503) 1 NC_007406.1 hypothetical protein 1126503 3674881 Nwi_1030 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317644.1 1126096 R 323098 CDS YP_317645.1 75675224 3674882 1126803..1127234 1 NC_007406.1 hypothetical protein 1127234 3674882 Nwi_1031 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317645.1 1126803 D 323098 CDS YP_317646.1 75675225 3674883 1127337..1127642 1 NC_007406.1 ABC transporter substrate-binding protein 1127642 3674883 Nwi_1032 Nitrobacter winogradskyi Nb-255 ABC transporter substrate-binding protein YP_317646.1 1127337 D 323098 CDS YP_317647.1 75675226 3674884 complement(1128012..1128302) 1 NC_007406.1 hypothetical protein 1128302 3674884 Nwi_1033 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317647.1 1128012 R 323098 CDS YP_317648.1 75675227 3674885 complement(1128327..1128491) 1 NC_007406.1 hypothetical protein 1128491 3674885 Nwi_1034 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317648.1 1128327 R 323098 CDS YP_317649.1 75675228 3674886 1128675..1129499 1 NC_007406.1 universal stress protein UspA 1129499 3674886 Nwi_1035 Nitrobacter winogradskyi Nb-255 universal stress protein UspA YP_317649.1 1128675 D 323098 CDS YP_317650.1 75675229 3674887 complement(1129721..1130416) 1 NC_007406.1 transcriptional regulator that positively regulated fixLJ operon; upregulated transcription by FixJ; part of global network that controls expression of aerobic respiratory terminal oxidases and carbon and nitrogen metabolic enzymes; transcriptional regulator FixK 1130416 fixK 3674887 fixK Nitrobacter winogradskyi Nb-255 transcriptional regulator FixK YP_317650.1 1129721 R 323098 CDS YP_317651.1 75675230 3674888 1131777..1131956 1 NC_007406.1 hypothetical protein 1131956 3674888 Nwi_1037 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317651.1 1131777 D 323098 CDS YP_317652.1 75675231 3674889 complement(1132041..1132424) 1 NC_007406.1 hypothetical protein 1132424 3674889 Nwi_1038 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317652.1 1132041 R 323098 CDS YP_317653.1 75675232 3674890 1132664..1132951 1 NC_007406.1 hypothetical protein 1132951 3674890 Nwi_1039 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317653.1 1132664 D 323098 CDS YP_317654.1 75675233 3674891 complement(1133281..1133523) 1 NC_007406.1 hypothetical protein 1133523 3674891 Nwi_1040 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317654.1 1133281 R 323098 CDS YP_317655.1 75675234 3674892 1133835..1134413 1 NC_007406.1 hypothetical protein 1134413 3674892 Nwi_1041 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317655.1 1133835 D 323098 CDS YP_317656.1 75675235 3674893 complement(1134819..1135670) 1 NC_007406.1 N-acetylmuramoyl-L-alanine amidase 1135670 3674893 Nwi_1042 Nitrobacter winogradskyi Nb-255 N-acetylmuramoyl-L-alanine amidase YP_317656.1 1134819 R 323098 CDS YP_317657.1 75675236 3675785 1136258..1137256 1 NC_007406.1 S-adenosyl-methyltransferase MraW 1137256 mraW 3675785 mraW Nitrobacter winogradskyi Nb-255 S-adenosyl-methyltransferase MraW YP_317657.1 1136258 D 323098 CDS YP_317658.1 75675237 3675786 1137261..1137641 1 NC_007406.1 hypothetical protein 1137641 3675786 Nwi_1044 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317658.1 1137261 D 323098 CDS YP_317659.1 75675238 3675787 1137638..1139377 1 NC_007406.1 penicillin-binding protein, transpeptidase 1139377 3675787 Nwi_1045 Nitrobacter winogradskyi Nb-255 penicillin-binding protein, transpeptidase YP_317659.1 1137638 D 323098 CDS YP_317660.1 75675239 3675788 1139459..1140916 1 NC_007406.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1140916 murE 3675788 murE Nitrobacter winogradskyi Nb-255 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_317660.1 1139459 D 323098 CDS YP_317661.1 75675240 3674870 1140913..1142343 1 NC_007406.1 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase 1142343 3674870 Nwi_1047 Nitrobacter winogradskyi Nb-255 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase YP_317661.1 1140913 D 323098 CDS YP_317662.1 75675241 3674871 1142425..1143531 1 NC_007406.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1143531 mraY 3674871 mraY Nitrobacter winogradskyi Nb-255 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_317662.1 1142425 D 323098 CDS YP_317663.1 75675242 3674872 1143542..1144942 1 NC_007406.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 1144942 murD 3674872 murD Nitrobacter winogradskyi Nb-255 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_317663.1 1143542 D 323098 CDS YP_317664.1 75675243 3677009 1145177..1146328 1 NC_007406.1 cell cycle protein 1146328 3677009 Nwi_1050 Nitrobacter winogradskyi Nb-255 cell cycle protein YP_317664.1 1145177 D 323098 CDS YP_317665.1 75675244 3677010 1146332..1147483 1 NC_007406.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1147483 murG 3677010 murG Nitrobacter winogradskyi Nb-255 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_317665.1 1146332 D 323098 CDS YP_317666.1 75675245 3677011 1147587..1148990 1 NC_007406.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 1148990 murC 3677011 murC Nitrobacter winogradskyi Nb-255 UDP-N-acetylmuramate--L-alanine ligase YP_317666.1 1147587 D 323098 CDS YP_317667.1 75675246 3677012 complement(1148996..1149328) 1 NC_007406.1 excinuclease ABC subunit C 1149328 3677012 Nwi_1053 Nitrobacter winogradskyi Nb-255 excinuclease ABC subunit C YP_317667.1 1148996 R 323098 CDS YP_317668.1 75675247 3677013 1149463..1150380 1 NC_007406.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 1150380 murB 3677013 murB Nitrobacter winogradskyi Nb-255 UDP-N-acetylenolpyruvoylglucosamine reductase YP_317668.1 1149463 D 323098 CDS YP_317669.1 75675248 3677014 1150386..1151378 1 NC_007406.1 D-alanine--D-alanine ligase 1151378 3677014 Nwi_1055 Nitrobacter winogradskyi Nb-255 D-alanine--D-alanine ligase YP_317669.1 1150386 D 323098 CDS YP_317670.1 75675249 3677015 1151763..1152785 1 NC_007406.1 cell division protein FtsQ 1152785 3677015 Nwi_1056 Nitrobacter winogradskyi Nb-255 cell division protein FtsQ YP_317670.1 1151763 D 323098 CDS YP_317671.1 75675250 3677016 1152782..1154104 1 NC_007406.1 cell division protein FtsA 1154104 3677016 Nwi_1057 Nitrobacter winogradskyi Nb-255 cell division protein FtsA YP_317671.1 1152782 D 323098 CDS YP_317672.1 75675251 3677017 1154195..1156006 1 NC_007406.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 1156006 3677017 Nwi_1058 Nitrobacter winogradskyi Nb-255 cell division protein FtsZ YP_317672.1 1154195 D 323098 CDS YP_317673.1 75675252 3677018 1156343..1157299 1 NC_007406.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 1157299 lpxC 3677018 lpxC Nitrobacter winogradskyi Nb-255 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_317673.1 1156343 D 323098 CDS YP_317674.1 75675253 3677019 1157771..1158667 1 NC_007406.1 lipoprotein 1158667 3677019 Nwi_1060 Nitrobacter winogradskyi Nb-255 lipoprotein YP_317674.1 1157771 D 323098 CDS YP_317675.1 75675254 3675714 1158812..1160497 1 NC_007406.1 DNA repair protein RecN 1160497 3675714 Nwi_1061 Nitrobacter winogradskyi Nb-255 DNA repair protein RecN YP_317675.1 1158812 D 323098 CDS YP_317676.1 75675255 3675715 1160504..1162654 1 NC_007406.1 NAD-dependent DNA ligase 1162654 3675715 Nwi_1062 Nitrobacter winogradskyi Nb-255 NAD-dependent DNA ligase YP_317676.1 1160504 D 323098 CDS YP_317677.1 75675256 3676439 complement(1162686..1163390) 1 NC_007406.1 fumarylacetoacetate (FAA) hydrolase 1163390 3676439 Nwi_1063 Nitrobacter winogradskyi Nb-255 fumarylacetoacetate (FAA) hydrolase YP_317677.1 1162686 R 323098 CDS YP_317678.1 75675257 3676440 complement(1163558..1165366) 1 NC_007406.1 ABC transporter transmembrane region 1165366 3676440 Nwi_1064 Nitrobacter winogradskyi Nb-255 ABC transporter transmembrane region YP_317678.1 1163558 R 323098 CDS YP_317679.1 75675258 3676441 complement(1165486..1166496) 1 NC_007406.1 UDP-glucose 4-epimerase 1166496 3676441 Nwi_1065 Nitrobacter winogradskyi Nb-255 UDP-glucose 4-epimerase YP_317679.1 1165486 R 323098 CDS YP_317680.1 75675259 3676442 1166681..1167625 1 NC_007406.1 lipopolysaccharide heptosyltransferase I 1167625 3676442 Nwi_1066 Nitrobacter winogradskyi Nb-255 lipopolysaccharide heptosyltransferase I YP_317680.1 1166681 D 323098 CDS YP_317681.1 75675260 3674264 complement(1167622..1168176) 1 NC_007406.1 histidinol-phosphate phosphatase 1168176 3674264 Nwi_1067 Nitrobacter winogradskyi Nb-255 histidinol-phosphate phosphatase YP_317681.1 1167622 R 323098 CDS YP_317682.1 75675261 3674265 complement(1168173..1168766) 1 NC_007406.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 1168766 3674265 Nwi_1068 Nitrobacter winogradskyi Nb-255 phosphoheptose isomerase YP_317682.1 1168173 R 323098 CDS YP_317683.1 75675262 3674266 complement(1168837..1169907) 1 NC_007406.1 lipopolysaccharide heptosyltransferase II 1169907 3674266 Nwi_1069 Nitrobacter winogradskyi Nb-255 lipopolysaccharide heptosyltransferase II YP_317683.1 1168837 R 323098 CDS YP_317684.1 75675263 3674267 1170260..1171240 1 NC_007406.1 ADP-L-glycero-D-manno-heptose-6-epimerase 1171240 3674267 Nwi_1070 Nitrobacter winogradskyi Nb-255 ADP-L-glycero-D-manno-heptose-6-epimerase YP_317684.1 1170260 D 323098 CDS YP_317685.1 75675264 3674268 1171471..1172937 1 NC_007406.1 cytidyltransferase-related, RfaE bifunctional protein 1172937 3674268 Nwi_1071 Nitrobacter winogradskyi Nb-255 cytidyltransferase-related, RfaE bifunctional protein YP_317685.1 1171471 D 323098 CDS YP_317686.1 75675265 3674269 1173006..1174949 1 NC_007406.1 NAD-dependent epimerase/dehydratase 1174949 3674269 Nwi_1072 Nitrobacter winogradskyi Nb-255 NAD-dependent epimerase/dehydratase YP_317686.1 1173006 D 323098 CDS YP_317687.1 75675266 3674270 complement(1174959..1175951) 1 NC_007406.1 hypothetical protein 1175951 3674270 Nwi_1073 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317687.1 1174959 R 323098 CDS YP_317688.1 75675267 3674271 1176200..1177219 1 NC_007406.1 NAD-dependent epimerase/dehydratase 1177219 3674271 Nwi_1074 Nitrobacter winogradskyi Nb-255 NAD-dependent epimerase/dehydratase YP_317688.1 1176200 D 323098 CDS YP_317689.1 75675268 3674272 1177389..1178801 1 NC_007406.1 mannose-1-phosphate guanylyltransferase 1178801 3674272 Nwi_1075 Nitrobacter winogradskyi Nb-255 mannose-1-phosphate guanylyltransferase YP_317689.1 1177389 D 323098 CDS YP_317690.1 75675269 3674273 1179022..1180059 1 NC_007406.1 oxidoreductase 1180059 3674273 Nwi_1076 Nitrobacter winogradskyi Nb-255 oxidoreductase YP_317690.1 1179022 D 323098 CDS YP_317691.1 75675270 3674274 1180075..1181223 1 NC_007406.1 DegT/DnrJ/EryC1/StrS aminotransferase 1181223 3674274 Nwi_1077 Nitrobacter winogradskyi Nb-255 DegT/DnrJ/EryC1/StrS aminotransferase YP_317691.1 1180075 D 323098 CDS YP_317692.1 75675271 3674275 1181267..1182793 1 NC_007406.1 virulence factor MVIN-like 1182793 3674275 Nwi_1078 Nitrobacter winogradskyi Nb-255 virulence factor MVIN-like YP_317692.1 1181267 D 323098 CDS YP_317693.1 75675272 3674276 1182912..1185203 1 NC_007406.1 aldehyde oxidase 1185203 3674276 Nwi_1079 Nitrobacter winogradskyi Nb-255 aldehyde oxidase YP_317693.1 1182912 D 323098 CDS YP_317694.1 75675273 3674277 complement(1185223..1185648) 1 NC_007406.1 CHRD 1185648 3674277 Nwi_1080 Nitrobacter winogradskyi Nb-255 CHRD YP_317694.1 1185223 R 323098 CDS YP_317695.1 75675274 3674278 complement(1185725..1185970) 1 NC_007406.1 transcriptional regulator 1185970 3674278 Nwi_1081 Nitrobacter winogradskyi Nb-255 transcriptional regulator YP_317695.1 1185725 R 323098 CDS YP_317696.1 75675275 3676419 1186219..1187034 1 NC_007406.1 phosphomethylpyrimidine kinase 1187034 3676419 Nwi_1082 Nitrobacter winogradskyi Nb-255 phosphomethylpyrimidine kinase YP_317696.1 1186219 D 323098 CDS YP_317697.1 75675276 3676420 1187163..1187999 1 NC_007406.1 metallophosphoesterase 1187999 3676420 Nwi_1083 Nitrobacter winogradskyi Nb-255 metallophosphoesterase YP_317697.1 1187163 D 323098 CDS YP_317698.1 75675277 3676421 complement(1188146..1189303) 1 NC_007406.1 hypothetical protein 1189303 3676421 Nwi_1084 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317698.1 1188146 R 323098 CDS YP_317699.1 75675278 3676422 complement(1189448..1190449) 1 NC_007406.1 mandelate racemase 1190449 3676422 Nwi_1085 Nitrobacter winogradskyi Nb-255 mandelate racemase YP_317699.1 1189448 R 323098 CDS YP_317700.1 75675279 3676423 complement(1190741..1196140) 1 NC_007406.1 hypothetical protein 1196140 3676423 Nwi_1086 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317700.1 1190741 R 323098 CDS YP_317701.1 75675280 3676424 1196543..1196890 1 NC_007406.1 Hpt protein 1196890 3676424 Nwi_1087 Nitrobacter winogradskyi Nb-255 Hpt protein YP_317701.1 1196543 D 323098 CDS YP_317702.1 75675281 3676425 1197000..1197320 1 NC_007406.1 ferredoxin 1197320 3676425 Nwi_1088 Nitrobacter winogradskyi Nb-255 ferredoxin YP_317702.1 1197000 D 323098 CDS YP_317703.1 75675282 3676426 1197582..1198610 1 NC_007406.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 1198610 3676426 Nwi_1089 Nitrobacter winogradskyi Nb-255 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_317703.1 1197582 D 323098 CDS YP_317704.1 75675283 3676427 complement(1198649..1200673) 1 NC_007406.1 hypothetical protein 1200673 3676427 Nwi_1090 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317704.1 1198649 R 323098 CDS YP_317705.1 75675284 3676428 complement(1200804..1201934) 1 NC_007406.1 hypothetical protein 1201934 3676428 Nwi_1091 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317705.1 1200804 R 323098 CDS YP_317706.1 75675285 3676429 complement(1202534..1202971) 1 NC_007406.1 hypothetical protein 1202971 3676429 Nwi_1092 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317706.1 1202534 R 323098 CDS YP_317707.1 75675286 3676430 1203192..1203779 1 NC_007406.1 hypothetical protein 1203779 3676430 Nwi_1093 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317707.1 1203192 D 323098 CDS YP_317708.1 75675287 3676431 complement(1203802..1204353) 1 NC_007406.1 phosphoglycerate/bisphosphoglycerate mutase 1204353 3676431 Nwi_1094 Nitrobacter winogradskyi Nb-255 phosphoglycerate/bisphosphoglycerate mutase YP_317708.1 1203802 R 323098 CDS YP_317709.1 75675288 3676432 complement(1204501..1205133) 1 NC_007406.1 transposase, IS4 1205133 3676432 Nwi_1095 Nitrobacter winogradskyi Nb-255 transposase, IS4 YP_317709.1 1204501 R 323098 CDS YP_317710.1 75675289 3676433 complement(1204905..1205270) 1 NC_007406.1 ISBm1, transposase orfA 1205270 3676433 Nwi_1096 Nitrobacter winogradskyi Nb-255 ISBm1, transposase orfA YP_317710.1 1204905 R 323098 CDS YP_317711.1 75675290 3676434 1205403..1206353 1 NC_007406.1 integrase, catalytic region 1206353 3676434 Nwi_1097 Nitrobacter winogradskyi Nb-255 integrase, catalytic region YP_317711.1 1205403 D 323098 CDS YP_317712.1 75675291 3676435 1206403..1207776 1 NC_007406.1 FAD dependent oxidoreductase 1207776 3676435 Nwi_1098 Nitrobacter winogradskyi Nb-255 FAD dependent oxidoreductase YP_317712.1 1206403 D 323098 CDS YP_317713.1 75675292 3676436 1207965..1209806 1 NC_007406.1 flagellar basal body rod protein, FlaE 1209806 3676436 Nwi_1099 Nitrobacter winogradskyi Nb-255 flagellar basal body rod protein, FlaE YP_317713.1 1207965 D 323098 CDS YP_317714.1 75675293 3676437 1209848..1211716 1 NC_007406.1 hypothetical protein 1211716 3676437 Nwi_1100 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317714.1 1209848 D 323098 CDS YP_317715.1 75675294 3676438 1211738..1213243 1 NC_007406.1 hypothetical protein 1213243 3676438 Nwi_1101 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317715.1 1211738 D 323098 CDS YP_317716.1 75675295 3677286 1213415..1214893 1 NC_007406.1 pyridoxal-dependent decarboxylase 1214893 3677286 Nwi_1102 Nitrobacter winogradskyi Nb-255 pyridoxal-dependent decarboxylase YP_317716.1 1213415 D 323098 CDS YP_317717.1 75675296 3677287 complement(1215015..1215443) 1 NC_007406.1 post-transcriptional repressor of flagellum biosynthesis; promotes degradation of fljK mRNA; Bradyrhizobium has one thick and several thin flagella, the Bradyrhizobium protein in this cluster is associated with the thin flagella; flagellar biosynthesis repressor FlbT 1215443 flbT 3677287 flbT Nitrobacter winogradskyi Nb-255 flagellar biosynthesis repressor FlbT YP_317717.1 1215015 R 323098 CDS YP_317718.1 75675297 3677288 1215795..1217366 1 NC_007406.1 hypothetical protein 1217366 3677288 Nwi_1104 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317718.1 1215795 D 323098 CDS YP_317719.1 75675298 3677289 1217759..1219369 1 NC_007406.1 hypothetical protein 1219369 3677289 Nwi_1105 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317719.1 1217759 D 323098 CDS YP_317720.1 75675299 3677290 1219623..1219988 1 NC_007406.1 acts as an activator of flagellin translation and may be required for filament secretion or assembly; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum; flagellar biosynthesis regulatory protein FlaF 1219988 flaF 3677290 flaF Nitrobacter winogradskyi Nb-255 flagellar biosynthesis regulatory protein FlaF YP_317720.1 1219623 D 323098 CDS YP_317721.1 75675300 3677291 1220018..1220383 1 NC_007406.1 hypothetical protein 1220383 3677291 Nwi_1107 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317721.1 1220018 D 323098 CDS YP_317722.1 75675301 3677292 complement(1220599..1220964) 1 NC_007406.1 hypothetical protein 1220964 3677292 Nwi_1108 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317722.1 1220599 R 323098 CDS YP_317723.1 75675302 3677293 complement(1221145..1221636) 1 NC_007406.1 hypothetical protein 1221636 3677293 Nwi_1109 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317723.1 1221145 R 323098 CDS YP_317724.1 75675303 3677294 complement(1221633..1222022) 1 NC_007406.1 chemotactic signal-response protein CheL 1222022 3677294 Nwi_1110 Nitrobacter winogradskyi Nb-255 chemotactic signal-response protein CheL YP_317724.1 1221633 R 323098 CDS YP_317725.1 75675304 3677295 complement(1222022..1223146) 1 NC_007406.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring biosynthesis protein FlgA 1223146 flgI 3677295 flgI Nitrobacter winogradskyi Nb-255 flagellar basal body P-ring biosynthesis protein FlgA YP_317725.1 1222022 R 323098 CDS YP_317726.1 75675305 3677296 1223478..1223891 1 NC_007406.1 regulator of the sigma 54 transcriptional activator FlbD; represses FlbD when the class II flagellar structure is absent and activates FlbD when the structure is present; flagellar assembly regulator FliX 1223891 fliX 3677296 fliX Nitrobacter winogradskyi Nb-255 flagellar assembly regulator FliX YP_317726.1 1223478 D 323098 CDS YP_317727.1 75675306 3677297 1224098..1224508 1 NC_007406.1 DnaK suppressor protein DksA 1224508 3677297 Nwi_1113 Nitrobacter winogradskyi Nb-255 DnaK suppressor protein DksA YP_317727.1 1224098 D 323098 CDS YP_317728.1 75675307 3677298 complement(1224565..1224900) 1 NC_007406.1 hypothetical protein 1224900 3677298 Nwi_1114 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317728.1 1224565 R 323098 CDS YP_317729.1 75675308 3677299 complement(1224984..1225472) 1 NC_007406.1 heat shock protein Hsp20 1225472 3677299 Nwi_1115 Nitrobacter winogradskyi Nb-255 heat shock protein Hsp20 YP_317729.1 1224984 R 323098 CDS YP_317730.1 75675309 3677300 complement(1225555..1226013) 1 NC_007406.1 heat shock protein Hsp20 1226013 3677300 Nwi_1116 Nitrobacter winogradskyi Nb-255 heat shock protein Hsp20 YP_317730.1 1225555 R 323098 CDS YP_317731.1 75675310 3677301 complement(1226303..1228168) 1 NC_007406.1 patatin 1228168 3677301 Nwi_1117 Nitrobacter winogradskyi Nb-255 patatin YP_317731.1 1226303 R 323098 CDS YP_317732.1 75675311 3677302 complement(1228284..1228649) 1 NC_007406.1 hypothetical protein 1228649 3677302 Nwi_1118 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317732.1 1228284 R 323098 CDS YP_317733.1 75675312 3677303 complement(1228830..1229588) 1 NC_007406.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 1229588 flgH 3677303 flgH Nitrobacter winogradskyi Nb-255 flagellar basal body L-ring protein YP_317733.1 1228830 R 323098 CDS YP_317734.1 75675313 3677304 complement(1229594..1230736) 1 NC_007406.1 required for the assembly of the flagellar basal body P-ring; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum; flagellar basal body P-ring biosynthesis protein FlgA 1230736 flgA 3677304 flgA Nitrobacter winogradskyi Nb-255 flagellar basal body P-ring biosynthesis protein FlgA YP_317734.1 1229594 R 323098 CDS YP_317735.1 75675314 3674463 complement(1230775..1231563) 1 NC_007406.1 makes up the distal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagella; flagellar basal body rod protein FlgG 1231563 flgG 3674463 flgG Nitrobacter winogradskyi Nb-255 flagellar basal body rod protein FlgG YP_317735.1 1230775 R 323098 CDS YP_317736.1 75675315 3674464 complement(1231577..1232344) 1 NC_007406.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the Bradyrhizobium protein in this cluster is associated with the thick flagellum; flagellar basal body rod protein FlgF 1232344 flgF 3674464 flgF Nitrobacter winogradskyi Nb-255 flagellar basal body rod protein FlgF YP_317736.1 1231577 R 323098 CDS YP_317737.1 75675316 3674465 1232863..1233351 1 NC_007406.1 interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body protein FliL 1233351 fliL 3674465 fliL Nitrobacter winogradskyi Nb-255 flagellar basal body protein FliL YP_317737.1 1232863 D 323098 CDS YP_317738.1 75675317 3674466 1233586..1234791 1 NC_007406.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar motor switch protein FliM 1234791 fliM 3674466 fliM Nitrobacter winogradskyi Nb-255 flagellar motor switch protein FliM YP_317738.1 1233586 D 323098 CDS YP_317739.1 75675318 3674467 1234788..1235222 1 NC_007406.1 hypothetical protein 1235222 3674467 Nwi_1125 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317739.1 1234788 D 323098 CDS YP_317740.1 75675319 3674468 1235219..1236022 1 NC_007406.1 hypothetical protein 1236022 3674468 Nwi_1126 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317740.1 1235219 D 323098 CDS YP_317741.1 75675320 3674469 1236213..1239956 1 NC_007406.1 hypothetical protein 1239956 3674469 Nwi_1127 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317741.1 1236213 D 323098 CDS YP_317742.1 75675321 3674470 complement(1240070..1240312) 1 NC_007406.1 hypothetical protein 1240312 3674470 Nwi_1128 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317742.1 1240070 R 323098 CDS YP_317743.1 75675322 3674471 1240837..1242381 1 NC_007406.1 hypothetical protein 1242381 3674471 Nwi_1129 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317743.1 1240837 D 323098 CDS YP_317744.1 75675323 3674472 complement(1242465..1243220) 1 NC_007406.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 1243220 fliP 3674472 fliP Nitrobacter winogradskyi Nb-255 flagellar biosynthesis protein FliP YP_317744.1 1242465 R 323098 CDS YP_317745.1 75675324 3674473 complement(1243217..1244074) 1 NC_007406.1 hypothetical protein 1244074 3674473 Nwi_1131 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317745.1 1243217 R 323098 CDS YP_317746.1 75675325 3674474 1244527..1244934 1 NC_007406.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar basal-body rod protein FlgB 1244934 flgB 3674474 flgB Nitrobacter winogradskyi Nb-255 flagellar basal-body rod protein FlgB YP_317746.1 1244527 D 323098 CDS YP_317747.1 75675326 3674475 1244964..1245389 1 NC_007406.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 1245389 flgC 3674475 flgC Nitrobacter winogradskyi Nb-255 flagellar basal body rod protein FlgC YP_317747.1 1244964 D 323098 CDS YP_317748.1 75675327 3674476 1245405..1245716 1 NC_007406.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; Bradyrhizobium has one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagella; flagellar hook-basal body protein FliE 1245716 fliE 3674476 fliE Nitrobacter winogradskyi Nb-255 flagellar hook-basal body protein FliE YP_317748.1 1245405 D 323098 CDS YP_317749.1 75675328 3674477 1245829..1246092 1 NC_007406.1 FliQ, with proteins FliP and FliR, forms the core of the central channel in the flagella export apparatus; Bradyrhizobium have one thick flagellum and several thin flagella; the protein in this cluster is associated with the thick flagellum; flagellar biosynthesis protein FliQ 1246092 fliQ 3674477 fliQ Nitrobacter winogradskyi Nb-255 flagellar biosynthesis protein FliQ YP_317749.1 1245829 D 323098 CDS YP_317750.1 75675329 3674478 1246109..1246879 1 NC_007406.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 1246879 fliR 3674478 fliR Nitrobacter winogradskyi Nb-255 flagellar biosynthesis protein FliR YP_317750.1 1246109 D 323098 CDS YP_317751.1 75675330 3674479 1246889..1247968 1 NC_007406.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 1247968 flhB 3674479 flhB Nitrobacter winogradskyi Nb-255 flagellar biosynthesis protein FlhB YP_317751.1 1246889 D 323098 CDS YP_317752.1 75675331 3674480 1248011..1250677 1 NC_007406.1 Signal transduction histidine kinase 1250677 3674480 Nwi_1138 Nitrobacter winogradskyi Nb-255 Signal transduction histidine kinase YP_317752.1 1248011 D 323098 CDS YP_317753.1 75675332 3674481 complement(1250831..1251796) 1 NC_007406.1 hypothetical protein 1251796 3674481 Nwi_1139 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317753.1 1250831 R 323098 CDS YP_317754.1 75675333 3674482 complement(1251932..1253149) 1 NC_007406.1 phage integrase 1253149 3674482 Nwi_1140 Nitrobacter winogradskyi Nb-255 phage integrase YP_317754.1 1251932 R 323098 CDS YP_317755.1 75675334 3674737 complement(1253406..1253930) 1 NC_007406.1 hypothetical protein 1253930 3674737 Nwi_1141 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317755.1 1253406 R 323098 CDS YP_317756.1 75675335 3674738 complement(1254217..1254441) 1 NC_007406.1 hypothetical protein 1254441 3674738 Nwi_1142 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317756.1 1254217 R 323098 CDS YP_317757.1 75675336 3674739 complement(1254585..1255565) 1 NC_007406.1 Fis family transcriptional regulator 1255565 3674739 Nwi_1143 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_317757.1 1254585 R 323098 CDS YP_317758.1 75675337 3674740 complement(1255562..1255936) 1 NC_007406.1 transposase IS3/IS911 1255936 3674740 Nwi_1144 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_317758.1 1255562 R 323098 CDS YP_317759.1 75675338 3674741 1256286..1256774 1 NC_007406.1 hypothetical protein 1256774 3674741 Nwi_1145 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317759.1 1256286 D 323098 CDS YP_317760.1 75675339 3674742 complement(1257687..1257908) 1 NC_007406.1 hypothetical protein 1257908 3674742 Nwi_1146 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317760.1 1257687 R 323098 CDS YP_317761.1 75675340 3674743 1258478..1259323 1 NC_007406.1 hypothetical protein 1259323 3674743 Nwi_1147 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317761.1 1258478 D 323098 CDS YP_317762.1 75675341 3674744 complement(1259347..1259925) 1 NC_007406.1 hypothetical protein 1259925 3674744 Nwi_1148 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317762.1 1259347 R 323098 CDS YP_317763.1 75675342 3674745 complement(1259922..1260500) 1 NC_007406.1 hypothetical protein 1260500 3674745 Nwi_1149 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317763.1 1259922 R 323098 CDS YP_317764.1 75675343 3674746 complement(1260594..1262873) 1 NC_007406.1 penicillin-binding protein 1A 1262873 3674746 Nwi_1150 Nitrobacter winogradskyi Nb-255 penicillin-binding protein 1A YP_317764.1 1260594 R 323098 CDS YP_317765.1 75675344 3674747 1263057..1263698 1 NC_007406.1 hypothetical protein 1263698 3674747 Nwi_1151 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317765.1 1263057 D 323098 CDS YP_317766.1 75675345 3674748 1263841..1265391 1 NC_007406.1 major facilitator transporter 1265391 3674748 Nwi_1152 Nitrobacter winogradskyi Nb-255 major facilitator transporter YP_317766.1 1263841 D 323098 CDS YP_317767.1 75675346 3674749 1265685..1265858 1 NC_007406.1 Flp/Fap pilin component 1265858 3674749 Nwi_1153 Nitrobacter winogradskyi Nb-255 Flp/Fap pilin component YP_317767.1 1265685 D 323098 CDS YP_317768.1 75675347 3674750 complement(1266020..1266652) 1 NC_007406.1 hypothetical protein 1266652 3674750 Nwi_1154 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317768.1 1266020 R 323098 CDS YP_317769.1 75675348 3674751 complement(1266719..1267186) 1 NC_007406.1 hypothetical protein 1267186 3674751 Nwi_1155 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317769.1 1266719 R 323098 CDS YP_317770.1 75675349 3674752 complement(1267240..1268178) 1 NC_007406.1 ISSpo8, transposase 1268178 3674752 Nwi_1156 Nitrobacter winogradskyi Nb-255 ISSpo8, transposase YP_317770.1 1267240 R 323098 CDS YP_317771.1 75675350 3674753 complement(1268863..1269369) 1 NC_007406.1 ISRm2011-2 transposase 1269369 3674753 Nwi_1157 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_317771.1 1268863 R 323098 CDS YP_317772.1 75675351 3674754 complement(1269456..1269806) 1 NC_007406.1 transposase 1269806 3674754 Nwi_1158 Nitrobacter winogradskyi Nb-255 transposase YP_317772.1 1269456 R 323098 CDS YP_317773.1 75675352 3674755 1270401..1271156 1 NC_007406.1 hypothetical protein 1271156 3674755 Nwi_1159 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317773.1 1270401 D 323098 CDS YP_317774.1 75675353 3675795 1271149..1272417 1 NC_007406.1 hypothetical protein 1272417 3675795 Nwi_1160 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317774.1 1271149 D 323098 CDS YP_317775.1 75675354 3675796 1272467..1273642 1 NC_007406.1 Phage portal protein, HK97 1273642 3675796 Nwi_1161 Nitrobacter winogradskyi Nb-255 Phage portal protein, HK97 YP_317775.1 1272467 D 323098 CDS YP_317776.1 75675355 3675797 1273608..1273898 1 NC_007406.1 hypothetical protein 1273898 3675797 Nwi_1162 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317776.1 1273608 D 323098 CDS YP_317777.1 75675356 3675798 1274169..1274816 1 NC_007406.1 peptidase U35 1274816 3675798 Nwi_1163 Nitrobacter winogradskyi Nb-255 peptidase U35 YP_317777.1 1274169 D 323098 CDS YP_317778.1 75675357 3675799 1274816..1275133 1 NC_007406.1 hypothetical protein 1275133 3675799 Nwi_1164 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317778.1 1274816 D 323098 CDS YP_317779.1 75675358 3675800 1275495..1275734 1 NC_007406.1 hypothetical protein 1275734 3675800 Nwi_1165 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317779.1 1275495 D 323098 CDS YP_317780.1 75675359 3675801 complement(1275783..1276109) 1 NC_007406.1 hypothetical protein 1276109 3675801 Nwi_1166 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317780.1 1275783 R 323098 CDS YP_317781.1 75675360 3675802 1276327..1277580 1 NC_007406.1 Phage major capsid protein, HK97 1277580 3675802 Nwi_1167 Nitrobacter winogradskyi Nb-255 Phage major capsid protein, HK97 YP_317781.1 1276327 D 323098 CDS YP_317782.1 75675361 3675803 1277736..1278488 1 NC_007406.1 hypothetical protein 1278488 3675803 Nwi_1168 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317782.1 1277736 D 323098 CDS YP_317783.1 75675362 3675804 1278527..1278898 1 NC_007406.1 hypothetical protein 1278898 3675804 Nwi_1169 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317783.1 1278527 D 323098 CDS YP_317784.1 75675363 3675805 1279164..1279442 1 NC_007406.1 hypothetical protein 1279442 3675805 Nwi_1170 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317784.1 1279164 D 323098 CDS YP_317785.1 75675364 3675806 complement(1279548..1280315) 1 NC_007406.1 peptidase S1 and S6, chymotrypsin/Hap 1280315 3675806 Nwi_1171 Nitrobacter winogradskyi Nb-255 peptidase S1 and S6, chymotrypsin/Hap YP_317785.1 1279548 R 323098 CDS YP_317786.1 75675365 3675807 1280428..1280991 1 NC_007406.1 hypothetical protein 1280991 3675807 Nwi_1172 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317786.1 1280428 D 323098 CDS YP_317787.1 75675366 3675808 1281024..1281434 1 NC_007406.1 gene transfer agent (GTA) like protein 1281434 3675808 Nwi_1173 Nitrobacter winogradskyi Nb-255 gene transfer agent (GTA) like protein YP_317787.1 1281024 D 323098 CDS YP_317788.1 75675367 3675809 1281451..1281858 1 NC_007406.1 Phage major tail protein, TP901-1 1281858 3675809 Nwi_1174 Nitrobacter winogradskyi Nb-255 Phage major tail protein, TP901-1 YP_317788.1 1281451 D 323098 CDS YP_317789.1 75675368 3675810 1281874..1282194 1 NC_007406.1 gene transfer agent (GTA) like protein 1282194 3675810 Nwi_1175 Nitrobacter winogradskyi Nb-255 gene transfer agent (GTA) like protein YP_317789.1 1281874 D 323098 CDS YP_317790.1 75675369 3675811 1282191..1282403 1 NC_007406.1 hypothetical protein 1282403 3675811 Nwi_1176 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317790.1 1282191 D 323098 CDS YP_317791.1 75675370 3675812 1282396..1282980 1 NC_007406.1 gene transfer agent (GTA) like protein 1282980 3675812 Nwi_1177 Nitrobacter winogradskyi Nb-255 gene transfer agent (GTA) like protein YP_317791.1 1282396 D 323098 CDS YP_317792.1 75675371 3675813 1282984..1283625 1 NC_007406.1 hypothetical protein 1283625 3675813 Nwi_1178 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317792.1 1282984 D 323098 CDS YP_317793.1 75675372 3675814 1283622..1284515 1 NC_007406.1 hypothetical protein 1284515 3675814 Nwi_1179 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317793.1 1283622 D 323098 CDS YP_317794.1 75675373 3676406 1284527..1284973 1 NC_007406.1 phage cell wall peptidase, NlpC/P60 1284973 3676406 Nwi_1180 Nitrobacter winogradskyi Nb-255 phage cell wall peptidase, NlpC/P60 YP_317794.1 1284527 D 323098 CDS YP_317795.1 75675374 3676407 1284973..1288830 1 NC_007406.1 gene transfer agent (GTA) orfg15, like protein 1288830 3676407 Nwi_1181 Nitrobacter winogradskyi Nb-255 gene transfer agent (GTA) orfg15, like protein YP_317795.1 1284973 D 323098 CDS YP_317796.1 75675375 3676408 1288837..1290759 1 NC_007406.1 hypothetical protein 1290759 3676408 Nwi_1182 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317796.1 1288837 D 323098 CDS YP_317797.1 75675376 3676409 1290907..1291407 1 NC_007406.1 hypothetical protein 1291407 3676409 Nwi_1183 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317797.1 1290907 D 323098 CDS YP_317798.1 75675377 3676410 1291463..1291702 1 NC_007406.1 hypothetical protein 1291702 3676410 Nwi_1184 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317798.1 1291463 D 323098 CDS YP_317799.1 75675378 3676411 1291727..1292119 1 NC_007406.1 hypothetical protein 1292119 3676411 Nwi_1185 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317799.1 1291727 D 323098 CDS YP_317800.1 75675379 3676412 1292123..1292374 1 NC_007406.1 hypothetical protein 1292374 3676412 Nwi_1186 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317800.1 1292123 D 323098 CDS YP_317801.1 75675380 3676413 1292649..1293320 1 NC_007406.1 two component transcriptional regulatory protein 1293320 3676413 Nwi_1187 Nitrobacter winogradskyi Nb-255 two component transcriptional regulatory protein YP_317801.1 1292649 D 323098 CDS YP_317802.1 75675381 3676414 1293310..1294707 1 NC_007406.1 Signal transduction histidine kinase 1294707 3676414 Nwi_1188 Nitrobacter winogradskyi Nb-255 Signal transduction histidine kinase YP_317802.1 1293310 D 323098 CDS YP_317803.1 75675382 3676415 1294814..1295242 1 NC_007406.1 LipA a lipoprotein 1295242 3676415 Nwi_1189 Nitrobacter winogradskyi Nb-255 LipA a lipoprotein YP_317803.1 1294814 D 323098 CDS YP_317804.1 75675383 3674418 1295501..1296892 1 NC_007406.1 hypothetical protein 1296892 3674418 Nwi_1190 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317804.1 1295501 D 323098 CDS YP_317805.1 75675384 3674419 1297055..1298158 1 NC_007406.1 cytochrome c-type biogenesis protein cycH / CcmH 1298158 3674419 Nwi_1191 Nitrobacter winogradskyi Nb-255 cytochrome c-type biogenesis protein cycH / CcmH YP_317805.1 1297055 D 323098 CDS YP_317806.1 75675385 3674420 1298193..1298681 1 NC_007406.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 1298681 3674420 Nwi_1192 Nitrobacter winogradskyi Nb-255 cytochrome c-type biogenesis protein CcmE YP_317806.1 1298193 D 323098 CDS YP_317807.1 75675386 3674421 1298678..1300663 1 NC_007406.1 cytochrome c-type biogenesis protein CcmF 1300663 3674421 Nwi_1193 Nitrobacter winogradskyi Nb-255 cytochrome c-type biogenesis protein CcmF YP_317807.1 1298678 D 323098 CDS YP_317808.1 75675387 3674422 1300671..1301234 1 NC_007406.1 cytochrome C biogenesis protein 1301234 3674422 Nwi_1194 Nitrobacter winogradskyi Nb-255 cytochrome C biogenesis protein YP_317808.1 1300671 D 323098 CDS YP_317809.1 75675388 3674423 1301419..1302969 1 NC_007406.1 peptidase S1C, Do 1302969 3674423 Nwi_1195 Nitrobacter winogradskyi Nb-255 peptidase S1C, Do YP_317809.1 1301419 D 323098 CDS YP_317810.1 75675389 3674424 1303301..1304017 1 NC_007406.1 two-component transcriptional regulator 1304017 3674424 Nwi_1196 Nitrobacter winogradskyi Nb-255 two-component transcriptional regulator YP_317810.1 1303301 D 323098 CDS YP_317811.1 75675390 3674425 complement(1304377..1304529) 1 NC_007406.1 hypothetical protein 1304529 3674425 Nwi_1197 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317811.1 1304377 R 323098 CDS YP_317812.1 75675391 3674426 1304970..1306430 1 NC_007406.1 Signal transduction histidine kinase 1306430 3674426 Nwi_1198 Nitrobacter winogradskyi Nb-255 Signal transduction histidine kinase YP_317812.1 1304970 D 323098 CDS YP_317813.1 75675392 3675658 1306427..1309390 1 NC_007406.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 1309390 3675658 Nwi_1199 Nitrobacter winogradskyi Nb-255 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_317813.1 1306427 D 323098 CDS YP_317814.1 75675393 3675659 complement(1309365..1311704) 1 NC_007406.1 Signal transduction histidine kinase 1311704 3675659 Nwi_1200 Nitrobacter winogradskyi Nb-255 Signal transduction histidine kinase YP_317814.1 1309365 R 323098 CDS YP_317815.1 75675394 3675660 complement(1311903..1313285) 1 NC_007406.1 cation efflux protein 1313285 3675660 Nwi_1201 Nitrobacter winogradskyi Nb-255 cation efflux protein YP_317815.1 1311903 R 323098 CDS YP_317816.1 75675395 3675661 complement(1313514..1313870) 1 NC_007406.1 hypothetical protein 1313870 3675661 Nwi_1202 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317816.1 1313514 R 323098 CDS YP_317817.1 75675396 3675662 1314133..1314432 1 NC_007406.1 histone-like DNA-binding protein 1314432 3675662 Nwi_1203 Nitrobacter winogradskyi Nb-255 histone-like DNA-binding protein YP_317817.1 1314133 D 323098 CDS YP_317818.1 75675397 3675663 complement(1314540..1317035) 1 NC_007406.1 glycogen/starch/alpha-glucan phosphorylase 1317035 3675663 Nwi_1204 Nitrobacter winogradskyi Nb-255 glycogen/starch/alpha-glucan phosphorylase YP_317818.1 1314540 R 323098 CDS YP_317819.1 75675398 3675664 complement(1317503..1319287) 1 NC_007406.1 alpha amylase 1319287 3675664 Nwi_1205 Nitrobacter winogradskyi Nb-255 alpha amylase YP_317819.1 1317503 R 323098 CDS YP_317820.1 75675399 3675665 complement(1319284..1321362) 1 NC_007406.1 glycogen debranching protein GlgX 1321362 3675665 Nwi_1206 Nitrobacter winogradskyi Nb-255 glycogen debranching protein GlgX YP_317820.1 1319284 R 323098 CDS YP_317821.1 75675400 3675666 complement(1321359..1323509) 1 NC_007406.1 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 1323509 3675666 Nwi_1207 Nitrobacter winogradskyi Nb-255 glycogen branching protein YP_317821.1 1321359 R 323098 CDS YP_317822.1 75675401 3675667 complement(1323506..1326790) 1 NC_007406.1 alpha amylase 1326790 3675667 Nwi_1208 Nitrobacter winogradskyi Nb-255 alpha amylase YP_317822.1 1323506 R 323098 CDS YP_317823.1 75675402 3675668 complement(1326800..1328773) 1 NC_007406.1 alpha amylase 1328773 3675668 Nwi_1209 Nitrobacter winogradskyi Nb-255 alpha amylase YP_317823.1 1326800 R 323098 CDS YP_317824.1 75675403 3675669 1328903..1330894 1 NC_007406.1 glycoside hydrolase 1330894 3675669 Nwi_1210 Nitrobacter winogradskyi Nb-255 glycoside hydrolase YP_317824.1 1328903 D 323098 CDS YP_317825.1 75675404 3675670 complement(1330967..1331479) 1 NC_007406.1 hypothetical protein 1331479 3675670 Nwi_1211 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317825.1 1330967 R 323098 CDS YP_317826.1 75675405 3675671 complement(1331618..1333228) 1 NC_007406.1 Signal transduction histidine kinase 1333228 3675671 Nwi_1212 Nitrobacter winogradskyi Nb-255 Signal transduction histidine kinase YP_317826.1 1331618 R 323098 CDS YP_317827.1 75675406 3675672 complement(1333399..1334268) 1 NC_007406.1 6-phosphogluconate dehydrogenase 1334268 3675672 Nwi_1213 Nitrobacter winogradskyi Nb-255 6-phosphogluconate dehydrogenase YP_317827.1 1333399 R 323098 CDS YP_317828.1 75675407 3675673 1334487..1334876 1 NC_007406.1 glyoxalase/bleomycin resistance protein/dioxygenase 1334876 3675673 Nwi_1214 Nitrobacter winogradskyi Nb-255 glyoxalase/bleomycin resistance protein/dioxygenase YP_317828.1 1334487 D 323098 CDS YP_317829.1 75675408 3675674 1335028..1336167 1 NC_007406.1 chromosome partitioning ATPase 1336167 3675674 Nwi_1215 Nitrobacter winogradskyi Nb-255 chromosome partitioning ATPase YP_317829.1 1335028 D 323098 CDS YP_317830.1 75675409 3675675 1336464..1337552 1 NC_007406.1 TRAP dicarboxylate transporter- DctP subunit 1337552 3675675 Nwi_1216 Nitrobacter winogradskyi Nb-255 TRAP dicarboxylate transporter- DctP subunit YP_317830.1 1336464 D 323098 CDS YP_317831.1 75675410 3675676 complement(1337810..1339420) 1 NC_007406.1 TRAP C4-dicarboxylate transport system permease DctM subunit 1339420 3675676 Nwi_1217 Nitrobacter winogradskyi Nb-255 TRAP C4-dicarboxylate transport system permease DctM subunit YP_317831.1 1337810 R 323098 CDS YP_317832.1 75675411 3675677 complement(1339417..1339956) 1 NC_007406.1 tripartite ATP-independent periplasmic transporter DctQ component 1339956 3675677 Nwi_1218 Nitrobacter winogradskyi Nb-255 tripartite ATP-independent periplasmic transporter DctQ component YP_317832.1 1339417 R 323098 CDS YP_317833.1 75675412 3676100 complement(1340455..1341486) 1 NC_007406.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 1341486 moaA 3676100 moaA Nitrobacter winogradskyi Nb-255 molybdenum cofactor biosynthesis protein A YP_317833.1 1340455 R 323098 CDS YP_317834.1 75675413 3676101 complement(1341745..1342422) 1 NC_007406.1 catalyzes the formation of glycolate and phosphate from 2-phosphoglycolate; phosphoglycolate phosphatase 1342422 3676101 Nwi_1220 Nitrobacter winogradskyi Nb-255 phosphoglycolate phosphatase YP_317834.1 1341745 R 323098 CDS YP_317835.1 75675414 3676102 1342784..1343482 1 NC_007406.1 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 1343482 3676102 Nwi_1221 Nitrobacter winogradskyi Nb-255 ribose-5-phosphate isomerase A YP_317835.1 1342784 D 323098 CDS YP_317836.1 75675415 3676103 1343505..1344029 1 NC_007406.1 hypothetical protein 1344029 3676103 Nwi_1222 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317836.1 1343505 D 323098 CDS YP_317837.1 75675416 3676104 1344048..1345430 1 NC_007406.1 glutathione reductase 1345430 3676104 Nwi_1223 Nitrobacter winogradskyi Nb-255 glutathione reductase YP_317837.1 1344048 D 323098 CDS YP_317838.1 75675417 3676105 1345798..1347186 1 NC_007406.1 DAHP synthetase, class II 1347186 3676105 Nwi_1224 Nitrobacter winogradskyi Nb-255 DAHP synthetase, class II YP_317838.1 1345798 D 323098 CDS YP_317839.1 75675418 3676106 1347381..1349132 1 NC_007406.1 NH(3)-dependent; catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 1349132 nadE 3676106 nadE Nitrobacter winogradskyi Nb-255 NAD synthetase YP_317839.1 1347381 D 323098 CDS YP_317840.1 75675419 3676107 complement(1349205..1350296) 1 NC_007406.1 hypothetical protein 1350296 3676107 Nwi_1226 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317840.1 1349205 R 323098 CDS YP_317841.1 75675420 3676108 complement(1350592..1350912) 1 NC_007406.1 hypothetical protein 1350912 3676108 Nwi_1227 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317841.1 1350592 R 323098 CDS YP_317842.1 75675421 3676109 1351226..1352659 1 NC_007406.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 1352659 cysS 3676109 cysS Nitrobacter winogradskyi Nb-255 cysteinyl-tRNA synthetase YP_317842.1 1351226 D 323098 CDS YP_317843.1 75675422 3676110 1352807..1353286 1 NC_007406.1 hypothetical protein 1353286 3676110 Nwi_1229 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317843.1 1352807 D 323098 CDS YP_317844.1 75675423 3676111 1353291..1353791 1 NC_007406.1 N-acetyltransferase 1353791 3676111 Nwi_1230 Nitrobacter winogradskyi Nb-255 N-acetyltransferase YP_317844.1 1353291 D 323098 CDS YP_317845.1 75675424 3676112 1353788..1355410 1 NC_007406.1 catalyzes the formation of 2-isopropylmalate from 1-methyl-2-oxobutanoate and acetyl-CoA; alpha-isopropylmalate/homocitrate synthase transferase 1355410 3676112 Nwi_1231 Nitrobacter winogradskyi Nb-255 alpha-isopropylmalate/homocitrate synthase transferase YP_317845.1 1353788 D 323098 CDS YP_317846.1 75675425 3676113 complement(1355411..1356016) 1 NC_007406.1 hypothetical protein 1356016 3676113 Nwi_1232 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317846.1 1355411 R 323098 CDS YP_317847.1 75675426 3674458 1356230..1358188 1 NC_007406.1 ABC transporter transmembrane region 1358188 3674458 Nwi_1233 Nitrobacter winogradskyi Nb-255 ABC transporter transmembrane region YP_317847.1 1356230 D 323098 CDS YP_317848.1 75675427 3674459 1358310..1359053 1 NC_007406.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 1359053 3674459 Nwi_1234 Nitrobacter winogradskyi Nb-255 phosphatidylserine decarboxylase YP_317848.1 1358310 D 323098 CDS YP_317849.1 75675428 3674460 1359152..1360030 1 NC_007406.1 CDP-diacylglycerol--serine O-phosphatidyltransferase 1360030 3674460 Nwi_1235 Nitrobacter winogradskyi Nb-255 CDP-diacylglycerol--serine O-phosphatidyltransferase YP_317849.1 1359152 D 323098 CDS YP_317850.1 75675429 3674461 1360307..1361080 1 NC_007406.1 MotA/TolQ/ExbB proton channel 1361080 3674461 Nwi_1236 Nitrobacter winogradskyi Nb-255 MotA/TolQ/ExbB proton channel YP_317850.1 1360307 D 323098 CDS YP_317851.1 75675430 3674462 1361107..1361937 1 NC_007406.1 OmpA/MotB protein 1361937 3674462 Nwi_1237 Nitrobacter winogradskyi Nb-255 OmpA/MotB protein YP_317851.1 1361107 D 323098 CDS YP_317852.1 75675431 3676562 1362034..1363989 1 NC_007406.1 K+ potassium transporter 1363989 3676562 Nwi_1238 Nitrobacter winogradskyi Nb-255 K+ potassium transporter YP_317852.1 1362034 D 323098 CDS YP_317853.1 75675432 3676563 1364148..1364561 1 NC_007406.1 rhodanese-like protein 1364561 3676563 Nwi_1239 Nitrobacter winogradskyi Nb-255 rhodanese-like protein YP_317853.1 1364148 D 323098 CDS YP_317854.1 75675433 3676564 1364577..1365728 1 NC_007406.1 hypothetical protein 1365728 3676564 Nwi_1240 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317854.1 1364577 D 323098 CDS YP_317855.1 75675434 3676565 1365734..1366849 1 NC_007406.1 extracellular solute-binding protein 1366849 3676565 Nwi_1241 Nitrobacter winogradskyi Nb-255 extracellular solute-binding protein YP_317855.1 1365734 D 323098 CDS YP_317856.1 75675435 3676566 complement(1366904..1367836) 1 NC_007406.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 1367836 3676566 Nwi_1242 Nitrobacter winogradskyi Nb-255 lipid A biosynthesis lauroyl acyltransferase YP_317856.1 1366904 R 323098 CDS YP_317857.1 75675436 3676567 complement(1367929..1369209) 1 NC_007406.1 FabF, beta-Ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-ACP synthase 1369209 3676567 Nwi_1243 Nitrobacter winogradskyi Nb-255 3-oxoacyl-ACP synthase YP_317857.1 1367929 R 323098 CDS YP_317858.1 75675437 3676568 complement(1369239..1370444) 1 NC_007406.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 1370444 3676568 Nwi_1244 Nitrobacter winogradskyi Nb-255 3-oxoacyl-ACP synthase YP_317858.1 1369239 R 323098 CDS YP_317859.1 75675438 3676569 complement(1370437..1370910) 1 NC_007406.1 (3R)-hydroxymyristoyl-ACP dehydratase 1370910 3676569 Nwi_1245 Nitrobacter winogradskyi Nb-255 (3R)-hydroxymyristoyl-ACP dehydratase YP_317859.1 1370437 R 323098 CDS YP_317860.1 75675439 3676570 complement(1370921..1371202) 1 NC_007406.1 Involved in the biosynthetic pathways of fatty acids, phospholipids, lipopolysaccharides, and oligosaccharides; acyl carrier protein 1371202 3676570 Nwi_1246 Nitrobacter winogradskyi Nb-255 acyl carrier protein YP_317860.1 1370921 R 323098 CDS YP_317861.1 75675440 3676571 complement(1371391..1371732) 1 NC_007406.1 hypothetical protein 1371732 3676571 Nwi_1247 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317861.1 1371391 R 323098 CDS YP_317862.1 75675441 3676572 complement(1371841..1373694) 1 NC_007406.1 hypothetical protein 1373694 3676572 Nwi_1248 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317862.1 1371841 R 323098 CDS YP_317863.1 75675442 3676575 complement(1378014..1379588) 1 NC_007406.1 resolvase 1379588 3676575 Nwi_1250 Nitrobacter winogradskyi Nb-255 resolvase YP_317863.1 1378014 R 323098 CDS YP_317864.1 75675443 3676576 complement(1379594..1380454) 1 NC_007406.1 hypothetical protein 1380454 3676576 Nwi_1251 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317864.1 1379594 R 323098 CDS YP_317865.1 75675444 3676577 complement(1380464..1381384) 1 NC_007406.1 restriction endonuclease 1381384 3676577 Nwi_1252 Nitrobacter winogradskyi Nb-255 restriction endonuclease YP_317865.1 1380464 R 323098 CDS YP_317866.1 75675445 3676578 complement(1381386..1383179) 1 NC_007406.1 Type I restriction enzyme EcoAI specificity protein 1383179 3676578 Nwi_1253 Nitrobacter winogradskyi Nb-255 Type I restriction enzyme EcoAI specificity protein YP_317866.1 1381386 R 323098 CDS YP_317867.1 75675446 3676579 complement(1383176..1384630) 1 NC_007406.1 N-6 DNA methylase 1384630 3676579 Nwi_1254 Nitrobacter winogradskyi Nb-255 N-6 DNA methylase YP_317867.1 1383176 R 323098 CDS YP_317868.1 75675447 3675678 complement(1384634..1387069) 1 NC_007406.1 DEAD/DEAH box helicase 1387069 3675678 Nwi_1255 Nitrobacter winogradskyi Nb-255 DEAD/DEAH box helicase YP_317868.1 1384634 R 323098 CDS YP_317869.1 75675448 3675679 1387199..1387444 1 NC_007406.1 hypothetical protein 1387444 3675679 Nwi_1256 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317869.1 1387199 D 323098 CDS YP_317870.1 75675449 3675680 complement(1387679..1388575) 1 NC_007406.1 hypothetical protein 1388575 3675680 Nwi_1257 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317870.1 1387679 R 323098 CDS YP_317871.1 75675450 3675681 complement(1388859..1390811) 1 NC_007406.1 hypothetical protein 1390811 3675681 Nwi_1258 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317871.1 1388859 R 323098 CDS YP_317872.1 75675451 3675682 complement(1390808..1391698) 1 NC_007406.1 virulence-associated protein E 1391698 3675682 Nwi_1259 Nitrobacter winogradskyi Nb-255 virulence-associated protein E YP_317872.1 1390808 R 323098 CDS YP_317873.1 75675452 3675683 complement(1391688..1391921) 1 NC_007406.1 hypothetical protein 1391921 3675683 Nwi_1260 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317873.1 1391688 R 323098 CDS YP_317874.1 75675453 3675684 complement(1392260..1392526) 1 NC_007406.1 hypothetical protein 1392526 3675684 Nwi_1261 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317874.1 1392260 R 323098 CDS YP_317875.1 75675454 3675685 complement(1392556..1393323) 1 NC_007406.1 hypothetical protein 1393323 3675685 Nwi_1262 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317875.1 1392556 R 323098 CDS YP_317876.1 75675455 3675686 complement(1393368..1393721) 1 NC_007406.1 XRE family transcriptional regulator 1393721 3675686 Nwi_1263 Nitrobacter winogradskyi Nb-255 XRE family transcriptional regulator YP_317876.1 1393368 R 323098 CDS YP_317877.1 75675456 3675687 complement(1393812..1394252) 1 NC_007406.1 hypothetical protein 1394252 3675687 Nwi_1264 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317877.1 1393812 R 323098 CDS YP_317878.1 75675457 3675688 complement(1394603..1397737) 1 NC_007406.1 acriflavin resistance protein 1397737 3675688 Nwi_1265 Nitrobacter winogradskyi Nb-255 acriflavin resistance protein YP_317878.1 1394603 R 323098 CDS YP_317879.1 75675458 3675689 complement(1397888..1399123) 1 NC_007406.1 secretion protein HlyD 1399123 3675689 Nwi_1266 Nitrobacter winogradskyi Nb-255 secretion protein HlyD YP_317879.1 1397888 R 323098 CDS YP_317880.1 75675459 3675690 1399602..1400558 1 NC_007406.1 MotA/TolQ/ExbB proton channel 1400558 3675690 Nwi_1267 Nitrobacter winogradskyi Nb-255 MotA/TolQ/ExbB proton channel YP_317880.1 1399602 D 323098 CDS YP_317881.1 75675460 3675691 1400563..1401033 1 NC_007406.1 biopolymer transport protein ExbD/TolR 1401033 3675691 Nwi_1268 Nitrobacter winogradskyi Nb-255 biopolymer transport protein ExbD/TolR YP_317881.1 1400563 D 323098 CDS YP_317882.1 75675461 3675692 1401035..1401826 1 NC_007406.1 TonB protein 1401826 3675692 Nwi_1269 Nitrobacter winogradskyi Nb-255 TonB protein YP_317882.1 1401035 D 323098 CDS YP_317883.1 75675462 3675693 complement(1401884..1402297) 1 NC_007406.1 hypothetical protein 1402297 3675693 Nwi_1270 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317883.1 1401884 R 323098 CDS YP_317884.1 75675463 3675694 complement(1402348..1403031) 1 NC_007406.1 peptidase M50 1403031 3675694 Nwi_1271 Nitrobacter winogradskyi Nb-255 peptidase M50 YP_317884.1 1402348 R 323098 CDS YP_317885.1 75675464 3675695 complement(1403252..1404193) 1 NC_007406.1 transcription factor jumonji, jmjC 1404193 3675695 Nwi_1272 Nitrobacter winogradskyi Nb-255 transcription factor jumonji, jmjC YP_317885.1 1403252 R 323098 CDS YP_317886.1 75675465 3675696 complement(1404190..1405410) 1 NC_007406.1 hypothetical protein 1405410 3675696 Nwi_1273 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317886.1 1404190 R 323098 CDS YP_317887.1 75675466 3675697 1405861..1407318 1 NC_007406.1 peptidase C14, caspase catalytic subunit p20 1407318 3675697 Nwi_1274 Nitrobacter winogradskyi Nb-255 peptidase C14, caspase catalytic subunit p20 YP_317887.1 1405861 D 323098 CDS YP_317888.1 75675467 3675071 1407391..1407771 1 NC_007406.1 hypothetical protein 1407771 3675071 Nwi_1275 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317888.1 1407391 D 323098 CDS YP_317889.1 75675468 3675072 1408519..1408935 1 NC_007406.1 hypothetical protein 1408935 3675072 Nwi_1276 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317889.1 1408519 D 323098 CDS YP_317890.1 75675469 3675073 1409640..1409870 1 NC_007406.1 hypothetical protein 1409870 3675073 Nwi_1277 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317890.1 1409640 D 323098 CDS YP_317891.1 75675470 3675074 1410836..1411714 1 NC_007406.1 ISSpo3, transposase 1411714 3675074 Nwi_1278 Nitrobacter winogradskyi Nb-255 ISSpo3, transposase YP_317891.1 1410836 D 323098 CDS YP_317892.1 75675471 3675075 complement(1411753..1412427) 1 NC_007406.1 hypothetical protein 1412427 3675075 Nwi_1279 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317892.1 1411753 R 323098 CDS YP_317893.1 75675472 3675076 1412638..1413726 1 NC_007406.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 1413726 recA 3675076 recA Nitrobacter winogradskyi Nb-255 recombinase A YP_317893.1 1412638 D 323098 CDS YP_317894.1 75675473 3675077 complement(1413844..1414266) 1 NC_007406.1 hypothetical protein 1414266 3675077 Nwi_1281 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317894.1 1413844 R 323098 CDS YP_317895.1 75675474 3675078 complement(1414420..1414788) 1 NC_007406.1 transposase, IS4 1414788 3675078 Nwi_1282 Nitrobacter winogradskyi Nb-255 transposase, IS4 YP_317895.1 1414420 R 323098 CDS YP_317896.1 75675475 3675079 complement(1414803..1415201) 1 NC_007406.1 transposase 1415201 3675079 Nwi_1283 Nitrobacter winogradskyi Nb-255 transposase YP_317896.1 1414803 R 323098 CDS YP_317897.1 75675476 3675080 complement(1415326..1418190) 1 NC_007406.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 1418190 3675080 Nwi_1284 Nitrobacter winogradskyi Nb-255 glycine dehydrogenase YP_317897.1 1415326 R 323098 CDS YP_317898.1 75675477 3675081 complement(1418265..1418630) 1 NC_007406.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 1418630 3675081 Nwi_1285 Nitrobacter winogradskyi Nb-255 glycine cleavage system protein H YP_317898.1 1418265 R 323098 CDS YP_317899.1 75675478 3675082 complement(1418640..1419791) 1 NC_007406.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 1419791 gcvT 3675082 gcvT Nitrobacter winogradskyi Nb-255 glycine cleavage system aminomethyltransferase T YP_317899.1 1418640 R 323098 CDS YP_317900.1 75675479 3675083 1420243..1422918 1 NC_007406.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1422918 alaS 3675083 alaS Nitrobacter winogradskyi Nb-255 alanyl-tRNA synthetase YP_317900.1 1420243 D 323098 CDS YP_317901.1 75675480 3675084 complement(1422936..1423184) 1 NC_007406.1 hypothetical protein 1423184 3675084 Nwi_1288 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317901.1 1422936 R 323098 CDS YP_317902.1 75675481 3675085 1423630..1424004 1 NC_007406.1 transposase 1424004 3675085 Nwi_1289 Nitrobacter winogradskyi Nb-255 transposase YP_317902.1 1423630 D 323098 CDS YP_317903.1 75675482 3675086 1424159..1424386 1 NC_007406.1 IS4 family transposase 1424386 3675086 Nwi_1290 Nitrobacter winogradskyi Nb-255 IS4 family transposase YP_317903.1 1424159 D 323098 CDS YP_317904.1 75675483 3675087 complement(1424456..1425172) 1 NC_007406.1 ISRm2011-2 transposase 1425172 3675087 Nwi_1291 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_317904.1 1424456 R 323098 CDS YP_317905.1 75675484 3675088 1425556..1425921 1 NC_007406.1 ISBm1, transposase orfA 1425921 3675088 Nwi_1292 Nitrobacter winogradskyi Nb-255 ISBm1, transposase orfA YP_317905.1 1425556 D 323098 CDS YP_317906.1 75675485 3675089 complement(1426284..1427273) 1 NC_007406.1 integrase, catalytic region 1427273 3675089 Nwi_1293 Nitrobacter winogradskyi Nb-255 integrase, catalytic region YP_317906.1 1426284 R 323098 CDS YP_317907.1 75675486 3674794 complement(1428024..1429235) 1 NC_007406.1 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 1429235 3674794 Nwi_1294 Nitrobacter winogradskyi Nb-255 isocitrate dehydrogenase YP_317907.1 1428024 R 323098 CDS YP_317908.1 75675487 3674795 1429543..1430754 1 NC_007406.1 RNA methyl transferase TrmH 1430754 3674795 Nwi_1295 Nitrobacter winogradskyi Nb-255 RNA methyl transferase TrmH YP_317908.1 1429543 D 323098 CDS YP_317909.1 75675488 3674796 complement(1430821..1431771) 1 NC_007406.1 integrase, catalytic region 1431771 3674796 Nwi_1296 Nitrobacter winogradskyi Nb-255 integrase, catalytic region YP_317909.1 1430821 R 323098 CDS YP_317910.1 75675489 3674797 complement(1432233..1432598) 1 NC_007406.1 ISBm1, transposase orfA 1432598 3674797 Nwi_1297 Nitrobacter winogradskyi Nb-255 ISBm1, transposase orfA YP_317910.1 1432233 R 323098 CDS YP_317911.1 75675490 3674798 1433530..1433859 1 NC_007406.1 transposase IS3/IS911 1433859 3674798 Nwi_1298 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_317911.1 1433530 D 323098 CDS YP_317912.1 75675491 3674799 1433856..1434836 1 NC_007406.1 Fis family transcriptional regulator 1434836 3674799 Nwi_1299 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_317912.1 1433856 D 323098 CDS YP_317913.1 75675492 3674800 1434849..1435259 1 NC_007406.1 hypothetical protein 1435259 3674800 Nwi_1300 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317913.1 1434849 D 323098 CDS YP_317914.1 75675493 3674801 complement(1435334..1435912) 1 NC_007406.1 hypothetical protein 1435912 3674801 Nwi_1301 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317914.1 1435334 R 323098 CDS YP_317915.1 75675494 3674802 1436341..1436829 1 NC_007406.1 catalyzes the reaction of cyanate and bicarbonate to produce ammonia and carbon dioxide; cyanate hydratase 1436829 3674802 Nwi_1302 Nitrobacter winogradskyi Nb-255 cyanate hydratase YP_317915.1 1436341 D 323098 CDS YP_317916.1 75675495 3674803 complement(1437063..1437389) 1 NC_007406.1 hypothetical protein 1437389 3674803 Nwi_1303 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317916.1 1437063 R 323098 CDS YP_317917.2 162139848 3674804 1437734..1438501 1 NC_007406.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1438501 3674804 Nwi_1304 Nitrobacter winogradskyi Nb-255 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_317917.2 1437734 D 323098 CDS YP_317918.1 75675497 3674805 1438560..1438799 1 NC_007406.1 With PurL and PurQ catalyzes the conversion of formylglycinamide ribonucleotide, ATP, and glutamine to formylglycinamidine ribonucleotide, ADP, and glutamate in the fourth step of the purine biosynthetic pathway; phosphoribosylformylglycinamidine synthase subunit PurS 1438799 3674805 Nwi_1305 Nitrobacter winogradskyi Nb-255 phosphoribosylformylglycinamidine synthase subunit PurS YP_317918.1 1438560 D 323098 CDS YP_317919.1 75675498 3674806 1438812..1439513 1 NC_007406.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 1439513 3674806 Nwi_1306 Nitrobacter winogradskyi Nb-255 phosphoribosylformylglycinamidine synthase I YP_317919.1 1438812 D 323098 CDS YP_317920.1 75675499 3674807 1439510..1440187 1 NC_007406.1 hypothetical protein 1440187 3674807 Nwi_1307 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317920.1 1439510 D 323098 CDS YP_317921.1 75675500 3674808 1440187..1442400 1 NC_007406.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 1442400 3674808 Nwi_1308 Nitrobacter winogradskyi Nb-255 phosphoribosylformylglycinamidine synthase II YP_317921.1 1440187 D 323098 CDS YP_317922.1 75675501 3674809 1442613..1442846 1 NC_007406.1 BolA-like protein 1442846 3674809 Nwi_1309 Nitrobacter winogradskyi Nb-255 BolA-like protein YP_317922.1 1442613 D 323098 CDS YP_317923.1 75675502 3674810 complement(1442853..1443836) 1 NC_007406.1 hypothetical protein 1443836 3674810 Nwi_1310 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317923.1 1442853 R 323098 CDS YP_317924.1 75675503 3674811 complement(1443876..1445123) 1 NC_007406.1 hypothetical protein 1445123 3674811 Nwi_1311 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317924.1 1443876 R 323098 CDS YP_317925.1 75675504 3674812 1445357..1445695 1 NC_007406.1 glutaredoxin-like protein 1445695 3674812 Nwi_1312 Nitrobacter winogradskyi Nb-255 glutaredoxin-like protein YP_317925.1 1445357 D 323098 CDS YP_317926.1 75675505 3674813 1445922..1446185 1 NC_007406.1 hypothetical protein 1446185 3674813 Nwi_1313 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317926.1 1445922 D 323098 CDS YP_317927.1 75675506 3676580 1446481..1446831 1 NC_007406.1 transposase 1446831 3676580 Nwi_1314 Nitrobacter winogradskyi Nb-255 transposase YP_317927.1 1446481 D 323098 CDS YP_317928.1 75675507 3676581 1446783..1447424 1 NC_007406.1 ISRm2011-2 transposase 1447424 3676581 Nwi_1315 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_317928.1 1446783 D 323098 CDS YP_317929.1 75675508 3676582 complement(1447600..1448217) 1 NC_007406.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1448217 rpsD 3676582 rpsD Nitrobacter winogradskyi Nb-255 30S ribosomal protein S4 YP_317929.1 1447600 R 323098 CDS YP_317930.1 75675509 3676583 complement(1448526..1449341) 1 NC_007406.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 1449341 3676583 Nwi_1317 Nitrobacter winogradskyi Nb-255 glutamate racemase YP_317930.1 1448526 R 323098 CDS YP_317931.1 75675510 3676584 complement(1449609..1450166) 1 NC_007406.1 hypothetical protein 1450166 3676584 Nwi_1318 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317931.1 1449609 R 323098 CDS YP_317932.1 75675511 3676585 1450578..1451048 1 NC_007406.1 hypothetical protein 1451048 3676585 Nwi_1319 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317932.1 1450578 D 323098 CDS YP_317933.1 75675512 3676586 1451258..1452052 1 NC_007406.1 rhomboid-like protein 1452052 3676586 Nwi_1320 Nitrobacter winogradskyi Nb-255 rhomboid-like protein YP_317933.1 1451258 D 323098 CDS YP_317934.1 75675513 3676587 1452287..1452715 1 NC_007406.1 hypothetical protein 1452715 3676587 Nwi_1321 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317934.1 1452287 D 323098 CDS YP_317935.1 75675514 3676588 1452808..1453182 1 NC_007406.1 transposase 1453182 3676588 Nwi_1322 Nitrobacter winogradskyi Nb-255 transposase YP_317935.1 1452808 D 323098 CDS YP_317936.1 75675515 3676589 1453260..1453565 1 NC_007406.1 ISCc1, transposase OrfB 1453565 3676589 Nwi_1323 Nitrobacter winogradskyi Nb-255 ISCc1, transposase OrfB YP_317936.1 1453260 D 323098 CDS YP_317937.1 75675516 3676590 complement(1453579..1454625) 1 NC_007406.1 patatin 1454625 3676590 Nwi_1324 Nitrobacter winogradskyi Nb-255 patatin YP_317937.1 1453579 R 323098 CDS YP_317938.1 75675517 3676591 1454862..1455911 1 NC_007406.1 hypothetical protein 1455911 3676591 Nwi_1325 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317938.1 1454862 D 323098 CDS YP_317939.1 75675518 3676592 complement(1456139..1456492) 1 NC_007406.1 hypothetical protein 1456492 3676592 Nwi_1326 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317939.1 1456139 R 323098 CDS YP_317940.1 75675519 3676593 1456759..1457676 1 NC_007406.1 hypothetical protein 1457676 3676593 Nwi_1327 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317940.1 1456759 D 323098 CDS YP_317941.1 75675520 3676594 complement(1457787..1458242) 1 NC_007406.1 nitrogen-fixing NifU-like 1458242 3676594 Nwi_1328 Nitrobacter winogradskyi Nb-255 nitrogen-fixing NifU-like YP_317941.1 1457787 R 323098 CDS YP_317942.1 75675521 3676595 1458492..1459217 1 NC_007406.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 1459217 folE 3676595 folE Nitrobacter winogradskyi Nb-255 GTP cyclohydrolase I YP_317942.1 1458492 D 323098 CDS YP_317943.1 75675522 3676596 1459462..1459899 1 NC_007406.1 PR-AMP cyclohydrolase; functions in histidine biosynthesis from PRPP; converts 1-(5-phosphoribosyl)-AMP to 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxyamide during the histidine biosynthesis pathway; binds zinc and magnesium; forms homodimers; phosphoribosyl-AMP cyclohydrolase 1459899 hisI 3676596 hisI Nitrobacter winogradskyi Nb-255 phosphoribosyl-AMP cyclohydrolase YP_317943.1 1459462 D 323098 CDS YP_317944.1 75675523 3675774 1460271..1461215 1 NC_007406.1 hypothetical protein 1461215 3675774 Nwi_1331 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317944.1 1460271 D 323098 CDS YP_317945.1 75675524 3677211 1461430..1463100 1 NC_007406.1 hypothetical protein 1463100 3677211 Nwi_1332 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317945.1 1461430 D 323098 CDS YP_317946.1 75675525 3674446 complement(1463188..1463766) 1 NC_007406.1 Hpt protein 1463766 3674446 Nwi_1333 Nitrobacter winogradskyi Nb-255 Hpt protein YP_317946.1 1463188 R 323098 CDS YP_317947.1 75675526 3674447 complement(1463778..1464323) 1 NC_007406.1 response regulator receiver 1464323 3674447 Nwi_1334 Nitrobacter winogradskyi Nb-255 response regulator receiver YP_317947.1 1463778 R 323098 CDS YP_317948.1 75675527 3674448 complement(1464430..1465215) 1 NC_007406.1 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 1465215 ppnK 3674448 ppnK Nitrobacter winogradskyi Nb-255 inorganic polyphosphate/ATP-NAD kinase YP_317948.1 1464430 R 323098 CDS YP_317949.1 75675528 3674449 1465483..1465923 1 NC_007406.1 hypothetical protein 1465923 3674449 Nwi_1336 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317949.1 1465483 D 323098 CDS YP_317950.1 75675529 3674450 1466308..1467033 1 NC_007406.1 outer membrane protein 1467033 3674450 Nwi_1337 Nitrobacter winogradskyi Nb-255 outer membrane protein YP_317950.1 1466308 D 323098 CDS YP_317951.1 75675530 3674451 complement(1467245..1469692) 1 NC_007406.1 TonB-dependent siderophore receptor 1469692 3674451 Nwi_1338 Nitrobacter winogradskyi Nb-255 TonB-dependent siderophore receptor YP_317951.1 1467245 R 323098 CDS YP_317952.1 75675531 3674452 complement(1470031..1470990) 1 NC_007406.1 FecR protein 1470990 3674452 Nwi_1339 Nitrobacter winogradskyi Nb-255 FecR protein YP_317952.1 1470031 R 323098 CDS YP_317953.1 75675532 3674453 complement(1471052..1471612) 1 NC_007406.1 fec I like protein 1471612 3674453 Nwi_1340 Nitrobacter winogradskyi Nb-255 fec I like protein YP_317953.1 1471052 R 323098 CDS YP_317954.1 75675533 3674454 complement(1472191..1472427) 1 NC_007406.1 hypothetical protein 1472427 3674454 Nwi_1341 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317954.1 1472191 R 323098 CDS YP_317955.1 75675534 3674455 1472948..1473190 1 NC_007406.1 hypothetical protein 1473190 3674455 Nwi_1342 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317955.1 1472948 D 323098 CDS YP_317956.1 75675535 3674456 complement(1474356..1474715) 1 NC_007406.1 PRC-barrel protein 1474715 3674456 Nwi_1343 Nitrobacter winogradskyi Nb-255 PRC-barrel protein YP_317956.1 1474356 R 323098 CDS YP_317957.1 75675536 3677021 1476083..1476274 1 NC_007406.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 1476274 secE 3677021 secE Nitrobacter winogradskyi Nb-255 preprotein translocase subunit SecE YP_317957.1 1476083 D 323098 CDS YP_317958.1 75675537 3677022 1476304..1476834 1 NC_007406.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 1476834 nusG 3677022 nusG Nitrobacter winogradskyi Nb-255 transcription antitermination protein NusG YP_317958.1 1476304 D 323098 CDS YP_317959.1 75675538 3677023 1477022..1477450 1 NC_007406.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 1477450 rplK 3677023 rplK Nitrobacter winogradskyi Nb-255 50S ribosomal protein L11 YP_317959.1 1477022 D 323098 CDS YP_317960.1 75675539 3677024 1477457..1478149 1 NC_007406.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 1478149 rplA 3677024 rplA Nitrobacter winogradskyi Nb-255 50S ribosomal protein L1 YP_317960.1 1477457 D 323098 CDS YP_317961.2 162139847 3677025 1478854..1479372 1 NC_007406.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 1479372 rplJ 3677025 rplJ Nitrobacter winogradskyi Nb-255 50S ribosomal protein L10 YP_317961.2 1478854 D 323098 CDS YP_317962.1 75675541 3677026 1479427..1479804 1 NC_007406.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 1479804 rplL 3677026 rplL Nitrobacter winogradskyi Nb-255 50S ribosomal protein L7/L12 YP_317962.1 1479427 D 323098 CDS YP_317963.1 75675542 3675767 1480397..1484539 1 NC_007406.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 1484539 rpoB 3675767 rpoB Nitrobacter winogradskyi Nb-255 DNA-directed RNA polymerase subunit beta YP_317963.1 1480397 D 323098 CDS YP_317964.1 75675543 3675768 1484698..1488897 1 NC_007406.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 1488897 3675768 Nwi_1351 Nitrobacter winogradskyi Nb-255 DNA-directed RNA polymerase subunit beta' YP_317964.1 1484698 D 323098 CDS YP_317965.1 75675544 3675769 complement(1489325..1489798) 1 NC_007406.1 hypothetical protein 1489798 3675769 Nwi_1352 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317965.1 1489325 R 323098 CDS YP_317966.1 75675545 3675770 complement(1489828..1490121) 1 NC_007406.1 hypothetical protein 1490121 3675770 Nwi_1353 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317966.1 1489828 R 323098 CDS YP_317967.1 75675546 3675771 complement(1490173..1490499) 1 NC_007406.1 hypothetical protein 1490499 3675771 Nwi_1354 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317967.1 1490173 R 323098 CDS YP_317968.1 75675547 3675772 1490565..1491683 1 NC_007406.1 hypothetical protein 1491683 3675772 Nwi_1355 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317968.1 1490565 D 323098 CDS YP_317969.1 75675548 3675773 1491845..1492555 1 NC_007406.1 hypothetical protein 1492555 3675773 Nwi_1356 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317969.1 1491845 D 323098 CDS YP_317970.1 75675549 3674393 1492643..1492882 1 NC_007406.1 hypothetical protein 1492882 3674393 Nwi_1357 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_317970.1 1492643 D 323098 CDS YP_317971.1 75675550 3674770 1493645..1494010 1 NC_007406.1 ISBm1, transposase orfA 1494010 3674770 Nwi_1358 Nitrobacter winogradskyi Nb-255 ISBm1, transposase orfA YP_317971.1 1493645 D 323098 CDS YP_317972.1 75675551 3674771 1495400..1495771 1 NC_007406.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 1495771 rpsL 3674771 rpsL Nitrobacter winogradskyi Nb-255 30S ribosomal protein S12 YP_317972.1 1495400 D 323098 CDS YP_317973.1 75675552 3674772 1495787..1496257 1 NC_007406.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 1496257 3674772 Nwi_1360 Nitrobacter winogradskyi Nb-255 30S ribosomal protein S7 YP_317973.1 1495787 D 323098 CDS YP_317974.1 75675553 3674773 1496290..1498362 1 NC_007406.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1498362 3674773 Nwi_1361 Nitrobacter winogradskyi Nb-255 elongation factor G YP_317974.1 1496290 D 323098 CDS YP_317975.1 75675554 3674774 1498402..1499592 1 NC_007406.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1499592 3674774 Nwi_1362 Nitrobacter winogradskyi Nb-255 elongation factor Tu YP_317975.1 1498402 D 323098 CDS YP_317976.1 75675555 3674775 1499694..1500002 1 NC_007406.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 1500002 rpsJ 3674775 rpsJ Nitrobacter winogradskyi Nb-255 30S ribosomal protein S10 YP_317976.1 1499694 D 323098 CDS YP_317977.1 75675556 3674776 1500104..1500847 1 NC_007406.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1500847 rplC 3674776 rplC Nitrobacter winogradskyi Nb-255 50S ribosomal protein L3 YP_317977.1 1500104 D 323098 CDS YP_317978.1 75675557 3674777 1500849..1501469 1 NC_007406.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1501469 rplD 3674777 rplD Nitrobacter winogradskyi Nb-255 50S ribosomal protein L4 YP_317978.1 1500849 D 323098 CDS YP_317979.1 75675558 3674778 1501466..1501762 1 NC_007406.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 1501762 rplW 3674778 rplW Nitrobacter winogradskyi Nb-255 50S ribosomal protein L23 YP_317979.1 1501466 D 323098 CDS YP_317980.1 75675559 3674779 1501791..1502624 1 NC_007406.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1502624 rplB 3674779 rplB Nitrobacter winogradskyi Nb-255 50S ribosomal protein L2 YP_317980.1 1501791 D 323098 CDS YP_317981.1 75675560 3674780 1502640..1502918 1 NC_007406.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 1502918 rpsS 3674780 rpsS Nitrobacter winogradskyi Nb-255 30S ribosomal protein S19 YP_317981.1 1502640 D 323098 CDS YP_317982.1 75675561 3674781 1502929..1503315 1 NC_007406.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 1503315 rplV 3674781 rplV Nitrobacter winogradskyi Nb-255 50S ribosomal protein L22 YP_317982.1 1502929 D 323098 CDS YP_317983.1 75675562 3677149 1503334..1504029 1 NC_007406.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 1504029 rpsC 3677149 rpsC Nitrobacter winogradskyi Nb-255 30S ribosomal protein S3 YP_317983.1 1503334 D 323098 CDS YP_317984.1 75675563 3677150 1504109..1504522 1 NC_007406.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1504522 rplP 3677150 rplP Nitrobacter winogradskyi Nb-255 50S ribosomal protein L16 YP_317984.1 1504109 D 323098 CDS YP_317985.1 75675564 3677151 1504528..1504734 1 NC_007406.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 1504734 3677151 Nwi_1372 Nitrobacter winogradskyi Nb-255 50S ribosomal protein L29 YP_317985.1 1504528 D 323098 CDS YP_317986.1 75675565 3677152 1504746..1504994 1 NC_007406.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 1504994 rpsQ 3677152 rpsQ Nitrobacter winogradskyi Nb-255 30S ribosomal protein S17 YP_317986.1 1504746 D 323098 CDS YP_317987.1 75675566 3677153 1505034..1505402 1 NC_007406.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 1505402 rplN 3677153 rplN Nitrobacter winogradskyi Nb-255 50S ribosomal protein L14 YP_317987.1 1505034 D 323098 CDS YP_317988.1 75675567 3677154 1505402..1505716 1 NC_007406.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 1505716 rplX 3677154 rplX Nitrobacter winogradskyi Nb-255 50S ribosomal protein L24 YP_317988.1 1505402 D 323098 CDS YP_317989.1 75675568 3677155 1505709..1506266 1 NC_007406.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1506266 rplE 3677155 rplE Nitrobacter winogradskyi Nb-255 50S ribosomal protein L5 YP_317989.1 1505709 D 323098 CDS YP_317990.1 75675569 3677156 1506310..1506615 1 NC_007406.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 1506615 rpsN 3677156 rpsN Nitrobacter winogradskyi Nb-255 30S ribosomal protein S14 YP_317990.1 1506310 D 323098 CDS YP_317991.1 75675570 3677157 1506629..1507027 1 NC_007406.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1507027 rpsH 3677157 rpsH Nitrobacter winogradskyi Nb-255 30S ribosomal protein S8 YP_317991.1 1506629 D 323098 CDS YP_317992.1 75675571 3677158 1507099..1507632 1 NC_007406.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 1507632 rplF 3677158 rplF Nitrobacter winogradskyi Nb-255 50S ribosomal protein L6 YP_317992.1 1507099 D 323098 CDS YP_317993.1 75675572 3677159 1507644..1508006 1 NC_007406.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 1508006 rplR 3677159 rplR Nitrobacter winogradskyi Nb-255 50S ribosomal protein L18 YP_317993.1 1507644 D 323098 CDS YP_317994.1 75675573 3677160 1508065..1508640 1 NC_007406.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 1508640 rpsE 3677160 rpsE Nitrobacter winogradskyi Nb-255 30S ribosomal protein S5 YP_317994.1 1508065 D 323098 CDS YP_317995.1 75675574 3677161 1508719..1508913 1 NC_007406.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 1508913 rpmD 3677161 rpmD Nitrobacter winogradskyi Nb-255 50S ribosomal protein L30 YP_317995.1 1508719 D 323098 CDS YP_317996.1 75675575 3677162 1509033..1509518 1 NC_007406.1 late assembly protein; 50S ribosomal protein L15 1509518 rplO 3677162 rplO Nitrobacter winogradskyi Nb-255 50S ribosomal protein L15 YP_317996.1 1509033 D 323098 CDS YP_317997.1 75675576 3677163 1509667..1510998 1 NC_007406.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 1510998 secY 3677163 secY Nitrobacter winogradskyi Nb-255 preprotein translocase subunit SecY YP_317997.1 1509667 D 323098 CDS YP_317998.1 75675577 3677164 1511455..1512075 1 NC_007406.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1512075 adk 3677164 adk Nitrobacter winogradskyi Nb-255 adenylate kinase YP_317998.1 1511455 D 323098 CDS YP_317999.1 75675578 3677165 1512326..1512694 1 NC_007406.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1512694 rpsM 3677165 rpsM Nitrobacter winogradskyi Nb-255 30S ribosomal protein S13 YP_317999.1 1512326 D 323098 CDS YP_318000.1 75675579 3677166 1512804..1513196 1 NC_007406.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1513196 3677166 Nwi_1387 Nitrobacter winogradskyi Nb-255 30S ribosomal protein S11 YP_318000.1 1512804 D 323098 CDS YP_318001.1 75675580 3677167 1513305..1514324 1 NC_007406.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1514324 3677167 Nwi_1388 Nitrobacter winogradskyi Nb-255 DNA-directed RNA polymerase subunit alpha YP_318001.1 1513305 D 323098 CDS YP_318002.1 75675581 3677027 1514441..1514857 1 NC_007406.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 1514857 rplQ 3677027 rplQ Nitrobacter winogradskyi Nb-255 50S ribosomal protein L17 YP_318002.1 1514441 D 323098 CDS YP_318003.1 75675582 3677028 1515255..1515524 1 NC_007406.1 hypothetical protein 1515524 3677028 Nwi_1390 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318003.1 1515255 D 323098 CDS YP_318004.1 75675583 3677029 1515861..1517351 1 NC_007406.1 peptidase S1C, Do 1517351 3677029 Nwi_1391 Nitrobacter winogradskyi Nb-255 peptidase S1C, Do YP_318004.1 1515861 D 323098 CDS YP_318005.1 75675584 3677030 1517348..1518679 1 NC_007406.1 recombination factor protein RarA 1518679 3677030 Nwi_1392 Nitrobacter winogradskyi Nb-255 recombination factor protein RarA YP_318005.1 1517348 D 323098 CDS YP_318006.1 75675585 3677031 1518676..1519515 1 NC_007406.1 hypothetical protein 1519515 3677031 Nwi_1393 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318006.1 1518676 D 323098 CDS YP_318007.1 75675586 3677032 1519738..1520976 1 NC_007406.1 pseudouridine synthase 1520976 3677032 Nwi_1394 Nitrobacter winogradskyi Nb-255 pseudouridine synthase YP_318007.1 1519738 D 323098 CDS YP_318008.1 75675587 3677033 1521189..1521539 1 NC_007406.1 transposase 1521539 3677033 Nwi_1395 Nitrobacter winogradskyi Nb-255 transposase YP_318008.1 1521189 D 323098 CDS YP_318009.1 75675588 3677034 1521491..1522132 1 NC_007406.1 ISRm2011-2 transposase 1522132 3677034 Nwi_1396 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_318009.1 1521491 D 323098 CDS YP_318010.1 75675589 3677035 1522320..1522685 1 NC_007406.1 ISBm1, transposase orfA 1522685 3677035 Nwi_1397 Nitrobacter winogradskyi Nb-255 ISBm1, transposase orfA YP_318010.1 1522320 D 323098 CDS YP_318011.1 75675590 3677036 1523263..1524045 1 NC_007406.1 chaperone required for the assembly of F1-ATPase 1524045 3677036 Nwi_1398 Nitrobacter winogradskyi Nb-255 chaperone required for the assembly of F1-ATPase YP_318011.1 1523263 D 323098 CDS YP_318012.1 75675591 3677037 1524094..1525746 1 NC_007406.1 hypothetical protein 1525746 3677037 Nwi_1399 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318012.1 1524094 D 323098 CDS YP_318013.1 75675592 3677038 1525743..1526012 1 NC_007406.1 type III secretion proteins, related to flagellar biosynthesis protein FlhB 1526012 3677038 Nwi_1400 Nitrobacter winogradskyi Nb-255 type III secretion proteins, related to flagellar biosynthesis protein FlhB YP_318013.1 1525743 D 323098 CDS YP_318014.1 75675593 3677039 1526114..1527646 1 NC_007406.1 carboxyl transferase 1527646 3677039 Nwi_1401 Nitrobacter winogradskyi Nb-255 carboxyl transferase YP_318014.1 1526114 D 323098 CDS YP_318015.1 75675594 3677040 1527658..1528581 1 NC_007406.1 hypothetical protein 1528581 3677040 Nwi_1402 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318015.1 1527658 D 323098 CDS YP_318016.1 75675595 3677041 complement(1528670..1529170) 1 NC_007406.1 SmpA/OmlA protein 1529170 3677041 Nwi_1403 Nitrobacter winogradskyi Nb-255 SmpA/OmlA protein YP_318016.1 1528670 R 323098 CDS YP_318017.1 75675596 3677042 1529197..1529820 1 NC_007406.1 ubiquinol-cytochrome C chaperone 1529820 3677042 Nwi_1404 Nitrobacter winogradskyi Nb-255 ubiquinol-cytochrome C chaperone YP_318017.1 1529197 D 323098 CDS YP_318018.1 75675597 3677043 1529817..1530407 1 NC_007406.1 hypothetical protein 1530407 3677043 Nwi_1405 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318018.1 1529817 D 323098 CDS YP_318019.1 75675598 3677044 1530650..1531711 1 NC_007406.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 1531711 3677044 Nwi_1406 Nitrobacter winogradskyi Nb-255 glycerol-3-phosphate acyltransferase PlsX YP_318019.1 1530650 D 323098 CDS YP_318020.1 75675599 3677045 1531708..1532685 1 NC_007406.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 1532685 3677045 Nwi_1407 Nitrobacter winogradskyi Nb-255 3-oxoacyl-ACP synthase YP_318020.1 1531708 D 323098 CDS YP_318021.1 75675600 3677046 1532813..1533133 1 NC_007406.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 1533133 ihfA 3677046 ihfA Nitrobacter winogradskyi Nb-255 integration host factor subunit alpha YP_318021.1 1532813 D 323098 CDS YP_318022.1 75675601 3675236 1533152..1533772 1 NC_007406.1 MerR family transcriptional regulator 1533772 3675236 Nwi_1409 Nitrobacter winogradskyi Nb-255 MerR family transcriptional regulator YP_318022.1 1533152 D 323098 CDS YP_318023.1 75675602 3675238 1534194..1535375 1 NC_007406.1 saccharopine dehydrogenase 1535375 3675238 Nwi_1410 Nitrobacter winogradskyi Nb-255 saccharopine dehydrogenase YP_318023.1 1534194 D 323098 CDS YP_318024.1 75675603 3675239 complement(1535426..1536688) 1 NC_007406.1 hypothetical protein 1536688 3675239 Nwi_1411 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318024.1 1535426 R 323098 CDS YP_318025.1 75675604 3675240 complement(1536722..1538254) 1 NC_007406.1 sugar transferase 1538254 3675240 Nwi_1412 Nitrobacter winogradskyi Nb-255 sugar transferase YP_318025.1 1536722 R 323098 CDS YP_318026.1 75675605 3675241 complement(1538362..1539495) 1 NC_007406.1 group 1 glycosyl transferase 1539495 3675241 Nwi_1413 Nitrobacter winogradskyi Nb-255 group 1 glycosyl transferase YP_318026.1 1538362 R 323098 CDS YP_318027.1 75675606 3675242 complement(1539499..1540203) 1 NC_007406.1 polysaccharide export protein 1540203 3675242 Nwi_1414 Nitrobacter winogradskyi Nb-255 polysaccharide export protein YP_318027.1 1539499 R 323098 CDS YP_318028.1 75675607 3675243 1540451..1542598 1 NC_007406.1 lipopolysaccharide biosynthesis protein 1542598 3675243 Nwi_1415 Nitrobacter winogradskyi Nb-255 lipopolysaccharide biosynthesis protein YP_318028.1 1540451 D 323098 CDS YP_318029.1 75675608 3675244 complement(1542621..1543808) 1 NC_007406.1 hypothetical protein 1543808 3675244 Nwi_1416 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318029.1 1542621 R 323098 CDS YP_318030.1 75675609 3675245 complement(1543936..1544142) 1 NC_007406.1 hypothetical protein 1544142 3675245 Nwi_1417 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318030.1 1543936 R 323098 CDS YP_318031.1 75675610 3675246 1544240..1545322 1 NC_007406.1 cytochrome oxidase assembly 1545322 3675246 Nwi_1418 Nitrobacter winogradskyi Nb-255 cytochrome oxidase assembly YP_318031.1 1544240 D 323098 CDS YP_318032.1 75675611 3675247 1545582..1546838 1 NC_007406.1 major facilitator transporter 1546838 3675247 Nwi_1419 Nitrobacter winogradskyi Nb-255 major facilitator transporter YP_318032.1 1545582 D 323098 CDS YP_318033.1 75675612 3675248 complement(1547180..1548457) 1 NC_007406.1 catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; O-acetylhomoserine aminocarboxypropyltransferase 1548457 3675248 Nwi_1420 Nitrobacter winogradskyi Nb-255 O-acetylhomoserine aminocarboxypropyltransferase YP_318033.1 1547180 R 323098 CDS YP_318034.2 162139846 3675249 1548835..1549299 1 NC_007406.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 1549299 rplM 3675249 rplM Nitrobacter winogradskyi Nb-255 50S ribosomal protein L13 YP_318034.2 1548835 D 323098 CDS YP_318035.1 75675614 3675250 1549302..1549778 1 NC_007406.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 1549778 rpsI 3675250 rpsI Nitrobacter winogradskyi Nb-255 30S ribosomal protein S9 YP_318035.1 1549302 D 323098 CDS YP_318036.1 75675615 3675251 1549906..1551048 1 NC_007406.1 lytic transglycosylase, catalytic 1551048 3675251 Nwi_1423 Nitrobacter winogradskyi Nb-255 lytic transglycosylase, catalytic YP_318036.1 1549906 D 323098 CDS YP_318037.1 75675616 3675252 1551093..1551614 1 NC_007406.1 hypothetical protein 1551614 3675252 Nwi_1424 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318037.1 1551093 D 323098 CDS YP_318038.1 75675617 3675253 complement(1551629..1552873) 1 NC_007406.1 hypothetical protein 1552873 3675253 Nwi_1425 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318038.1 1551629 R 323098 CDS YP_318039.1 75675618 3677168 complement(1553005..1553757) 1 NC_007406.1 glycerophosphoryl diester phosphodiesterase 1553757 3677168 Nwi_1426 Nitrobacter winogradskyi Nb-255 glycerophosphoryl diester phosphodiesterase YP_318039.1 1553005 R 323098 CDS YP_318040.1 75675619 3677169 complement(1553764..1554231) 1 NC_007406.1 endoribonuclease L-PSP 1554231 3677169 Nwi_1427 Nitrobacter winogradskyi Nb-255 endoribonuclease L-PSP YP_318040.1 1553764 R 323098 CDS YP_318041.1 75675620 3677170 1554566..1555453 1 NC_007406.1 hypothetical protein 1555453 3677170 Nwi_1428 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318041.1 1554566 D 323098 CDS YP_318042.1 75675621 3677171 complement(1555504..1556793) 1 NC_007406.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 1556793 3677171 Nwi_1429 Nitrobacter winogradskyi Nb-255 DNA polymerase IV YP_318042.1 1555504 R 323098 CDS YP_318043.1 75675622 3677172 complement(1556790..1557098) 1 NC_007406.1 hypothetical protein 1557098 3677172 Nwi_1430 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318043.1 1556790 R 323098 CDS YP_318044.1 75675623 3677173 1557317..1557682 1 NC_007406.1 response regulator receiver 1557682 3677173 Nwi_1431 Nitrobacter winogradskyi Nb-255 response regulator receiver YP_318044.1 1557317 D 323098 CDS YP_318045.1 75675624 3677174 1557693..1559066 1 NC_007406.1 involved in swarmer-to-stalked cell differentiation in Caulobacter crescentus; catalyzes the condensation of two GTP molecules to form the secondary messenger cyclic di-GMP (c-di-GMP); upon phosphorylation of domain D1 the protein dimerizes; presumably this allows the two GTP-bound GGDEF (diguanylate cyclase) domains to catalyze the condensation reaction; allosterically inhibited by c-di-GMP; response regulator PleD 1559066 pleD 3677174 pleD Nitrobacter winogradskyi Nb-255 response regulator PleD YP_318045.1 1557693 D 323098 CDS YP_318046.1 75675625 3677175 complement(1559427..1559594) 1 NC_007406.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1559594 rpmG 3677175 rpmG Nitrobacter winogradskyi Nb-255 50S ribosomal protein L33 YP_318046.1 1559427 R 323098 CDS YP_318047.1 75675626 3677176 1560268..1561740 1 NC_007406.1 type I secretion outer membrane protein, TolC 1561740 3677176 Nwi_1434 Nitrobacter winogradskyi Nb-255 type I secretion outer membrane protein, TolC YP_318047.1 1560268 D 323098 CDS YP_318048.1 75675627 3677177 1561947..1562666 1 NC_007406.1 hypothetical protein 1562666 3677177 Nwi_1435 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318048.1 1561947 D 323098 CDS YP_318049.1 75675628 3677178 1562869..1565727 1 NC_007406.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 1565727 valS 3677178 valS Nitrobacter winogradskyi Nb-255 valyl-tRNA synthetase YP_318049.1 1562869 D 323098 CDS YP_318050.1 75675629 3677179 1565724..1566890 1 NC_007406.1 major facilitator transporter 1566890 3677179 Nwi_1437 Nitrobacter winogradskyi Nb-255 major facilitator transporter YP_318050.1 1565724 D 323098 CDS YP_318051.1 75675630 3677180 complement(1566871..1567497) 1 NC_007406.1 responsible for recognizing base lesions in the genome and initiating base excision DNA repair; 3-methyladenine DNA glycosylase 1567497 3677180 Nwi_1438 Nitrobacter winogradskyi Nb-255 3-methyladenine DNA glycosylase YP_318051.1 1566871 R 323098 CDS YP_318052.1 75675631 3677181 1567715..1568674 1 NC_007406.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 1568674 3677181 Nwi_1439 Nitrobacter winogradskyi Nb-255 lipoyl synthase YP_318052.1 1567715 D 323098 CDS YP_318053.1 75675632 3677182 1568686..1569153 1 NC_007406.1 cyclase 1569153 3677182 Nwi_1440 Nitrobacter winogradskyi Nb-255 cyclase YP_318053.1 1568686 D 323098 CDS YP_318054.1 75675633 3677183 complement(1569164..1569790) 1 NC_007406.1 CinA protein 1569790 3677183 Nwi_1441 Nitrobacter winogradskyi Nb-255 CinA protein YP_318054.1 1569164 R 323098 CDS YP_318055.1 75675634 3677184 complement(1569792..1570988) 1 NC_007406.1 4-diphosphocytidyl-2C-methyl-D-erythritol synthase 1570988 3677184 Nwi_1442 Nitrobacter winogradskyi Nb-255 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_318055.1 1569792 R 323098 CDS YP_318056.1 75675635 3677185 1571189..1572238 1 NC_007406.1 dihydrouridine synthase TIM-barrel protein nifR3 1572238 3677185 Nwi_1443 Nitrobacter winogradskyi Nb-255 dihydrouridine synthase TIM-barrel protein nifR3 YP_318056.1 1571189 D 323098 CDS YP_318057.1 75675636 3677186 1572235..1573410 1 NC_007406.1 nitrogen regulation protein ntrB 1573410 3677186 Nwi_1444 Nitrobacter winogradskyi Nb-255 nitrogen regulation protein ntrB YP_318057.1 1572235 D 323098 CDS YP_318058.1 75675637 3675184 1573418..1574857 1 NC_007406.1 Fis family transcriptional regulator 1574857 3675184 Nwi_1445 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_318058.1 1573418 D 323098 CDS YP_318059.1 75675638 3675185 1575035..1577335 1 NC_007406.1 nitrogen regulatory signal transduction histidine kinase NtrY 1577335 3675185 Nwi_1446 Nitrobacter winogradskyi Nb-255 nitrogen regulatory signal transduction histidine kinase NtrY YP_318059.1 1575035 D 323098 CDS YP_318060.1 75675639 3675186 1577353..1578723 1 NC_007406.1 nitrogen assimilation regulatory protein ntrX 1578723 3675186 Nwi_1447 Nitrobacter winogradskyi Nb-255 nitrogen assimilation regulatory protein ntrX YP_318060.1 1577353 D 323098 CDS YP_318061.1 75675640 3675187 1578806..1579663 1 NC_007406.1 catalyzes the transamination of D-amino acids and their alpha-keto acids; D-amino acid aminotransferase 1579663 3675187 Nwi_1448 Nitrobacter winogradskyi Nb-255 D-amino acid aminotransferase YP_318061.1 1578806 D 323098 CDS YP_318062.1 75675641 3675188 1579848..1580096 1 NC_007406.1 Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 1580096 hfq 3675188 hfq Nitrobacter winogradskyi Nb-255 RNA-binding protein Hfq YP_318062.1 1579848 D 323098 CDS YP_318063.1 75675642 3675189 1580165..1581493 1 NC_007406.1 HSR1-like GTP-binding protein 1581493 3675189 Nwi_1450 Nitrobacter winogradskyi Nb-255 HSR1-like GTP-binding protein YP_318063.1 1580165 D 323098 CDS YP_318064.1 75675643 3675190 1581595..1583031 1 NC_007406.1 aldehyde dehydrogenase 1583031 3675190 Nwi_1451 Nitrobacter winogradskyi Nb-255 aldehyde dehydrogenase YP_318064.1 1581595 D 323098 CDS YP_318065.1 75675644 3675191 complement(1583054..1583878) 1 NC_007406.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase Era; nucleoside triphosphate pyrophosphohydrolase 1583878 mazG 3675191 mazG Nitrobacter winogradskyi Nb-255 nucleoside triphosphate pyrophosphohydrolase YP_318065.1 1583054 R 323098 CDS YP_318066.1 75675645 3675192 1584013..1584729 1 NC_007406.1 exoenzyme S synthesis protein B 1584729 3675192 Nwi_1453 Nitrobacter winogradskyi Nb-255 exoenzyme S synthesis protein B YP_318066.1 1584013 D 323098 CDS YP_318067.1 75675646 3675193 1584886..1585368 1 NC_007406.1 hypothetical protein 1585368 3675193 Nwi_1454 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318067.1 1584886 D 323098 CDS YP_318068.1 75675647 3675194 1585422..1586693 1 NC_007406.1 Outer membrane efflux protein 1586693 3675194 Nwi_1455 Nitrobacter winogradskyi Nb-255 Outer membrane efflux protein YP_318068.1 1585422 D 323098 CDS YP_318069.1 75675648 3675195 1586690..1587682 1 NC_007406.1 secretion protein HlyD 1587682 3675195 Nwi_1456 Nitrobacter winogradskyi Nb-255 secretion protein HlyD YP_318069.1 1586690 D 323098 CDS YP_318070.1 75675649 3675196 1587672..1590872 1 NC_007406.1 heavy metal efflux pump CzcA 1590872 3675196 Nwi_1457 Nitrobacter winogradskyi Nb-255 heavy metal efflux pump CzcA YP_318070.1 1587672 D 323098 CDS YP_318071.1 75675650 3675197 complement(1590960..1591304) 1 NC_007406.1 alkylhydroperoxidase 1591304 3675197 Nwi_1458 Nitrobacter winogradskyi Nb-255 alkylhydroperoxidase YP_318071.1 1590960 R 323098 CDS YP_318072.1 75675651 3675198 complement(1591599..1591925) 1 NC_007406.1 hypothetical protein 1591925 3675198 Nwi_1459 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318072.1 1591599 R 323098 CDS YP_318073.1 75675652 3675199 complement(1591968..1592771) 1 NC_007406.1 hypothetical protein 1592771 3675199 Nwi_1460 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318073.1 1591968 R 323098 CDS YP_318074.1 75675653 3675200 complement(1592768..1593559) 1 NC_007406.1 TatD-related deoxyribonuclease 1593559 3675200 Nwi_1461 Nitrobacter winogradskyi Nb-255 TatD-related deoxyribonuclease YP_318074.1 1592768 R 323098 CDS YP_318075.2 162139845 3675201 complement(1593574..1595208) 1 NC_007406.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1595208 metG 3675201 metG Nitrobacter winogradskyi Nb-255 methionyl-tRNA synthetase YP_318075.2 1593574 R 323098 CDS YP_318076.1 75675655 3675202 complement(1595717..1596757) 1 NC_007406.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 1596757 3675202 Nwi_1463 Nitrobacter winogradskyi Nb-255 DNA polymerase III subunit delta' YP_318076.1 1595717 R 323098 CDS YP_318077.1 75675656 3675203 complement(1596754..1597446) 1 NC_007406.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 1597446 3675203 Nwi_1464 Nitrobacter winogradskyi Nb-255 thymidylate kinase YP_318077.1 1596754 R 323098 CDS YP_318078.1 75675657 3675554 complement(1597446..1598687) 1 NC_007406.1 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 1598687 3675554 Nwi_1465 Nitrobacter winogradskyi Nb-255 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 YP_318078.1 1597446 R 323098 CDS YP_318079.1 75675658 3675555 complement(1598811..1599650) 1 NC_007406.1 rare lipoprotein A 1599650 3675555 Nwi_1466 Nitrobacter winogradskyi Nb-255 rare lipoprotein A YP_318079.1 1598811 R 323098 CDS YP_318080.1 75675659 3675556 complement(1599810..1600106) 1 NC_007406.1 hypothetical protein 1600106 3675556 Nwi_1467 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318080.1 1599810 R 323098 CDS YP_318081.1 75675660 3675557 complement(1601144..1601731) 1 NC_007406.1 hypothetical protein 1601731 3675557 Nwi_1468 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318081.1 1601144 R 323098 CDS YP_318082.1 75675661 3675558 1601761..1602174 1 NC_007406.1 hypothetical protein 1602174 3675558 Nwi_1469 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318082.1 1601761 D 323098 CDS YP_318083.1 75675662 3675559 complement(1602388..1602762) 1 NC_007406.1 hypothetical protein 1602762 3675559 Nwi_1470 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318083.1 1602388 R 323098 CDS YP_318084.1 75675663 3675560 complement(1602759..1604765) 1 NC_007406.1 hypothetical protein 1604765 3675560 Nwi_1471 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318084.1 1602759 R 323098 CDS YP_318085.1 75675664 3675561 complement(1604767..1606380) 1 NC_007406.1 phage terminase 1606380 3675561 Nwi_1472 Nitrobacter winogradskyi Nb-255 phage terminase YP_318085.1 1604767 R 323098 CDS YP_318086.1 75675665 3675562 complement(1606380..1606775) 1 NC_007406.1 phage terminase, small subunit , P27 1606775 3675562 Nwi_1473 Nitrobacter winogradskyi Nb-255 phage terminase, small subunit , P27 YP_318086.1 1606380 R 323098 CDS YP_318087.1 75675666 3675563 complement(1606775..1607824) 1 NC_007406.1 per-hexamer repeat-containing protein 1607824 3675563 Nwi_1474 Nitrobacter winogradskyi Nb-255 per-hexamer repeat-containing protein YP_318087.1 1606775 R 323098 CDS YP_318088.1 75675667 3675564 complement(1607946..1608260) 1 NC_007406.1 phage head-tail adaptor 1608260 3675564 Nwi_1475 Nitrobacter winogradskyi Nb-255 phage head-tail adaptor YP_318088.1 1607946 R 323098 CDS YP_318089.1 75675668 3675565 complement(1608257..1608691) 1 NC_007406.1 hypothetical protein 1608691 3675565 Nwi_1476 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318089.1 1608257 R 323098 CDS YP_318090.1 75675669 3675566 complement(1608688..1609113) 1 NC_007406.1 phage protein, HK97, gp10 1609113 3675566 Nwi_1477 Nitrobacter winogradskyi Nb-255 phage protein, HK97, gp10 YP_318090.1 1608688 R 323098 CDS YP_318091.1 75675670 3675567 complement(1609103..1609423) 1 NC_007406.1 phage protein DNA packaging protein 1609423 3675567 Nwi_1478 Nitrobacter winogradskyi Nb-255 phage protein DNA packaging protein YP_318091.1 1609103 R 323098 CDS YP_318092.1 75675671 3675568 complement(1609423..1609725) 1 NC_007406.1 hypothetical protein 1609725 3675568 Nwi_1479 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318092.1 1609423 R 323098 CDS YP_318093.1 75675672 3675569 complement(1609728..1610090) 1 NC_007406.1 HNH endonuclease 1610090 3675569 Nwi_1480 Nitrobacter winogradskyi Nb-255 HNH endonuclease YP_318093.1 1609728 R 323098 CDS YP_318094.1 75675673 3675570 complement(1610161..1610553) 1 NC_007406.1 hypothetical protein 1610553 3675570 Nwi_1481 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318094.1 1610161 R 323098 CDS YP_318095.1 75675674 3675571 complement(1610566..1611723) 1 NC_007406.1 Phage major capsid protein, HK97 1611723 3675571 Nwi_1482 Nitrobacter winogradskyi Nb-255 Phage major capsid protein, HK97 YP_318095.1 1610566 R 323098 CDS YP_318096.1 75675675 3675572 complement(1611729..1612226) 1 NC_007406.1 peptidase U35 1612226 3675572 Nwi_1483 Nitrobacter winogradskyi Nb-255 peptidase U35 YP_318096.1 1611729 R 323098 CDS YP_318097.1 75675676 3674204 complement(1612408..1612797) 1 NC_007406.1 hypothetical protein 1612797 3674204 Nwi_1484 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318097.1 1612408 R 323098 CDS YP_318098.1 75675677 3674205 complement(1612790..1613989) 1 NC_007406.1 Phage portal protein, HK97 1613989 3674205 Nwi_1485 Nitrobacter winogradskyi Nb-255 Phage portal protein, HK97 YP_318098.1 1612790 R 323098 CDS YP_318099.1 75675678 3674206 complement(1614677..1617067) 1 NC_007406.1 ATPase 1617067 3674206 Nwi_1486 Nitrobacter winogradskyi Nb-255 ATPase YP_318099.1 1614677 R 323098 CDS YP_318100.1 75675679 3674207 1618354..1619484 1 NC_007406.1 phage integrase 1619484 3674207 Nwi_1487 Nitrobacter winogradskyi Nb-255 phage integrase YP_318100.1 1618354 D 323098 CDS YP_318101.1 75675680 3674209 complement(1619748..1619987) 1 NC_007406.1 hypothetical protein 1619987 3674209 Nwi_1488 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318101.1 1619748 R 323098 CDS YP_318102.1 75675681 3674210 complement(1619994..1620473) 1 NC_007406.1 hypothetical protein 1620473 3674210 Nwi_1489 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318102.1 1619994 R 323098 CDS YP_318103.1 75675682 3674211 1620950..1621321 1 NC_007406.1 lipoprotein 1621321 3674211 Nwi_1490 Nitrobacter winogradskyi Nb-255 lipoprotein YP_318103.1 1620950 D 323098 CDS YP_318104.1 75675683 3674212 1621871..1622245 1 NC_007406.1 transposase IS3/IS911 1622245 3674212 Nwi_1491 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_318104.1 1621871 D 323098 CDS YP_318105.1 75675684 3674213 1622242..1623222 1 NC_007406.1 Fis family transcriptional regulator 1623222 3674213 Nwi_1492 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_318105.1 1622242 D 323098 CDS YP_318106.1 75675685 3674214 complement(1623167..1624480) 1 NC_007406.1 hypothetical protein 1624480 3674214 Nwi_1493 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318106.1 1623167 R 323098 CDS YP_318107.1 75675686 3674215 complement(1624477..1624740) 1 NC_007406.1 hypothetical protein 1624740 3674215 Nwi_1494 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318107.1 1624477 R 323098 CDS YP_318108.1 75675687 3674216 complement(1625528..1626124) 1 NC_007406.1 hypothetical protein 1626124 3674216 Nwi_1495 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318108.1 1625528 R 323098 CDS YP_318109.1 75675688 3674217 complement(1626121..1627152) 1 NC_007406.1 phage integrase 1627152 3674217 Nwi_1496 Nitrobacter winogradskyi Nb-255 phage integrase YP_318109.1 1626121 R 323098 CDS YP_318110.1 75675689 3674218 1627507..1627755 1 NC_007406.1 hypothetical protein 1627755 3674218 Nwi_1497 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318110.1 1627507 D 323098 CDS YP_318111.1 75675690 3674219 1628029..1628457 1 NC_007406.1 hypothetical protein 1628457 3674219 Nwi_1498 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318111.1 1628029 D 323098 CDS YP_318112.1 75675691 3674220 1628607..1629425 1 NC_007406.1 hypothetical protein 1629425 3674220 Nwi_1499 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318112.1 1628607 D 323098 CDS YP_318113.1 75675692 3674221 complement(1629447..1629857) 1 NC_007406.1 cupin 1629857 3674221 Nwi_1500 Nitrobacter winogradskyi Nb-255 cupin YP_318113.1 1629447 R 323098 CDS YP_318114.1 75675693 3675904 1629986..1630720 1 NC_007406.1 hypothetical protein 1630720 3675904 Nwi_1501 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318114.1 1629986 D 323098 CDS YP_318115.1 75675694 3675905 1630717..1631736 1 NC_007406.1 allophanate hydrolase subunit 2 1631736 3675905 Nwi_1502 Nitrobacter winogradskyi Nb-255 allophanate hydrolase subunit 2 YP_318115.1 1630717 D 323098 CDS YP_318116.1 75675695 3675906 1631798..1632565 1 NC_007406.1 LamB/YcsF family protein 1632565 3675906 Nwi_1503 Nitrobacter winogradskyi Nb-255 LamB/YcsF family protein YP_318116.1 1631798 D 323098 CDS YP_318117.1 75675696 3675907 complement(1632901..1633875) 1 NC_007406.1 zinc-containing alcohol dehydrogenase superfamily protein 1633875 3675907 Nwi_1504 Nitrobacter winogradskyi Nb-255 zinc-containing alcohol dehydrogenase superfamily protein YP_318117.1 1632901 R 323098 CDS YP_318118.1 75675697 3675908 complement(1633961..1634686) 1 NC_007406.1 integral membrane protein TerC 1634686 3675908 Nwi_1505 Nitrobacter winogradskyi Nb-255 integral membrane protein TerC YP_318118.1 1633961 R 323098 CDS YP_318119.1 75675698 3675909 complement(1634683..1635417) 1 NC_007406.1 CDP-alcohol phosphatidyltransferase 1635417 3675909 Nwi_1506 Nitrobacter winogradskyi Nb-255 CDP-alcohol phosphatidyltransferase YP_318119.1 1634683 R 323098 CDS YP_318120.1 75675699 3675910 1635569..1636843 1 NC_007406.1 2-octaprenyl-6-methoxyphenyl hydroxylase 1636843 3675910 Nwi_1507 Nitrobacter winogradskyi Nb-255 2-octaprenyl-6-methoxyphenyl hydroxylase YP_318120.1 1635569 D 323098 CDS YP_318121.1 75675700 3675911 1636970..1637314 1 NC_007406.1 hemimethylated DNA-binding region 1637314 3675911 Nwi_1508 Nitrobacter winogradskyi Nb-255 hemimethylated DNA-binding region YP_318121.1 1636970 D 323098 CDS YP_318122.1 75675701 3675912 complement(1637384..1638118) 1 NC_007406.1 invasion associated locus B 1638118 3675912 Nwi_1509 Nitrobacter winogradskyi Nb-255 invasion associated locus B YP_318122.1 1637384 R 323098 CDS YP_318123.1 75675702 3675913 1638492..1640354 1 NC_007406.1 extracellular solute-binding protein 1640354 3675913 Nwi_1510 Nitrobacter winogradskyi Nb-255 extracellular solute-binding protein YP_318123.1 1638492 D 323098 CDS YP_318124.1 75675703 3675914 1640359..1641861 1 NC_007406.1 AMP-dependent synthetase/ligase 1641861 3675914 Nwi_1511 Nitrobacter winogradskyi Nb-255 AMP-dependent synthetase/ligase YP_318124.1 1640359 D 323098 CDS YP_318125.1 75675704 3675915 1641947..1643176 1 NC_007406.1 hypothetical protein 1643176 3675915 Nwi_1512 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318125.1 1641947 D 323098 CDS YP_318126.1 75675705 3675916 complement(1643185..1646709) 1 NC_007406.1 transcription-repair coupling factor 1646709 3675916 Nwi_1513 Nitrobacter winogradskyi Nb-255 transcription-repair coupling factor YP_318126.1 1643185 R 323098 CDS YP_318127.1 75675706 3675917 complement(1646706..1647074) 1 NC_007406.1 hypothetical protein 1647074 3675917 Nwi_1514 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318127.1 1646706 R 323098 CDS YP_318128.1 75675707 3675918 1647153..1649252 1 NC_007406.1 DEAD/DEAH box helicase 1649252 3675918 Nwi_1515 Nitrobacter winogradskyi Nb-255 DEAD/DEAH box helicase YP_318128.1 1647153 D 323098 CDS YP_318129.1 75675708 3675919 complement(1649391..1650164) 1 NC_007406.1 hypothetical protein 1650164 3675919 Nwi_1516 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318129.1 1649391 R 323098 CDS YP_318130.1 75675709 3675920 complement(1650282..1652108) 1 NC_007406.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 1652108 3675920 Nwi_1517 Nitrobacter winogradskyi Nb-255 glucosamine--fructose-6-phosphate aminotransferase YP_318130.1 1650282 R 323098 CDS YP_318131.1 75675710 3675921 1652312..1652677 1 NC_007406.1 hypothetical protein 1652677 3675921 Nwi_1518 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318131.1 1652312 D 323098 CDS YP_318132.1 75675711 3676544 complement(1653014..1653853) 1 NC_007406.1 hypothetical protein 1653853 3676544 Nwi_1519 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318132.1 1653014 R 323098 CDS YP_318133.1 75675712 3676545 complement(1654004..1654717) 1 NC_007406.1 hypothetical protein 1654717 3676545 Nwi_1520 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318133.1 1654004 R 323098 CDS YP_318134.1 75675713 3676546 complement(1654765..1657863) 1 NC_007406.1 acriflavin resistance protein 1657863 3676546 Nwi_1521 Nitrobacter winogradskyi Nb-255 acriflavin resistance protein YP_318134.1 1654765 R 323098 CDS YP_318135.1 75675714 3676547 complement(1657863..1660985) 1 NC_007406.1 acriflavin resistance protein 1660985 3676547 Nwi_1522 Nitrobacter winogradskyi Nb-255 acriflavin resistance protein YP_318135.1 1657863 R 323098 CDS YP_318136.1 75675715 3676548 complement(1661048..1662421) 1 NC_007406.1 secretion protein HlyD 1662421 3676548 Nwi_1523 Nitrobacter winogradskyi Nb-255 secretion protein HlyD YP_318136.1 1661048 R 323098 CDS YP_318137.1 75675716 3676549 complement(1662411..1663895) 1 NC_007406.1 RND efflux system, outer membrane lipoprotein, NodT 1663895 3676549 Nwi_1524 Nitrobacter winogradskyi Nb-255 RND efflux system, outer membrane lipoprotein, NodT YP_318137.1 1662411 R 323098 CDS YP_318138.1 75675717 3676550 1664324..1665382 1 NC_007406.1 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A 1665382 3676550 Nwi_1525 Nitrobacter winogradskyi Nb-255 cysteine synthase A YP_318138.1 1664324 D 323098 CDS YP_318139.1 75675718 3676551 complement(1665396..1666139) 1 NC_007406.1 ABC transporter ATPase 1666139 3676551 Nwi_1526 Nitrobacter winogradskyi Nb-255 ABC transporter ATPase YP_318139.1 1665396 R 323098 CDS YP_318140.1 75675719 3676552 complement(1666152..1667672) 1 NC_007406.1 amino acid ABC transporter inner membrane component 1667672 3676552 Nwi_1527 Nitrobacter winogradskyi Nb-255 amino acid ABC transporter inner membrane component YP_318140.1 1666152 R 323098 CDS YP_318141.1 75675720 3676553 complement(1667669..1668874) 1 NC_007406.1 amino acid ABC transporter inner membrane component 1668874 3676553 Nwi_1528 Nitrobacter winogradskyi Nb-255 amino acid ABC transporter inner membrane component YP_318141.1 1667669 R 323098 CDS YP_318142.1 75675721 3676554 complement(1668890..1669930) 1 NC_007406.1 extracellular solute-binding protein 1669930 3676554 Nwi_1529 Nitrobacter winogradskyi Nb-255 extracellular solute-binding protein YP_318142.1 1668890 R 323098 CDS YP_318143.1 75675722 3676555 1670394..1671590 1 NC_007406.1 cystathionine beta-lyase 1671590 3676555 Nwi_1530 Nitrobacter winogradskyi Nb-255 cystathionine beta-lyase YP_318143.1 1670394 D 323098 CDS YP_318144.1 75675723 3676556 complement(1671675..1671998) 1 NC_007406.1 lipid A biosynthesis 1671998 3676556 Nwi_1531 Nitrobacter winogradskyi Nb-255 lipid A biosynthesis YP_318144.1 1671675 R 323098 CDS YP_318145.1 75675724 3676557 complement(1671991..1672740) 1 NC_007406.1 glycosyl transferase 1672740 3676557 Nwi_1532 Nitrobacter winogradskyi Nb-255 glycosyl transferase YP_318145.1 1671991 R 323098 CDS YP_318146.1 75675725 3676558 complement(1672754..1674508) 1 NC_007406.1 glycosyl transferase 1674508 3676558 Nwi_1533 Nitrobacter winogradskyi Nb-255 glycosyl transferase YP_318146.1 1672754 R 323098 CDS YP_318147.1 75675726 3676559 complement(1674548..1676668) 1 NC_007406.1 penicillin-binding protein 1C 1676668 3676559 Nwi_1534 Nitrobacter winogradskyi Nb-255 penicillin-binding protein 1C YP_318147.1 1674548 R 323098 CDS YP_318148.1 75675727 3676560 complement(1676665..1681884) 1 NC_007406.1 extracellular alpha-helical protein 1681884 3676560 Nwi_1535 Nitrobacter winogradskyi Nb-255 extracellular alpha-helical protein YP_318148.1 1676665 R 323098 CDS YP_318149.1 75675728 3676364 1683246..1683563 1 NC_007406.1 hypothetical protein 1683563 3676364 Nwi_1536 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318149.1 1683246 D 323098 CDS YP_318150.1 75675729 3676365 complement(1683509..1684045) 1 NC_007406.1 hypothetical protein 1684045 3676365 Nwi_1537 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318150.1 1683509 R 323098 CDS YP_318151.1 75675730 3676366 complement(1684049..1684282) 1 NC_007406.1 hypothetical protein 1684282 3676366 Nwi_1538 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318151.1 1684049 R 323098 CDS YP_318152.1 75675731 3676367 complement(1684576..1684998) 1 NC_007406.1 hypothetical protein 1684998 3676367 Nwi_1539 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318152.1 1684576 R 323098 CDS YP_318153.1 75675732 3676368 complement(1684998..1685771) 1 NC_007406.1 hypothetical protein 1685771 3676368 Nwi_1540 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318153.1 1684998 R 323098 CDS YP_318154.1 75675733 3676369 1686140..1687627 1 NC_007406.1 Fis family transcriptional regulator 1687627 3676369 Nwi_1541 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_318154.1 1686140 D 323098 CDS YP_318155.1 75675734 3676370 complement(1687660..1688919) 1 NC_007406.1 Phage major capsid protein, HK97 1688919 3676370 Nwi_1542 Nitrobacter winogradskyi Nb-255 Phage major capsid protein, HK97 YP_318155.1 1687660 R 323098 CDS YP_318156.1 75675735 3676371 complement(1688930..1689775) 1 NC_007406.1 peptidase S14, ClpP 1689775 3676371 Nwi_1543 Nitrobacter winogradskyi Nb-255 peptidase S14, ClpP YP_318156.1 1688930 R 323098 CDS YP_318157.1 75675736 3676372 complement(1689753..1691027) 1 NC_007406.1 Phage portal protein, HK97 1691027 3676372 Nwi_1544 Nitrobacter winogradskyi Nb-255 Phage portal protein, HK97 YP_318157.1 1689753 R 323098 CDS YP_318158.1 75675737 3676373 complement(1691040..1692806) 1 NC_007406.1 phage terminase 1692806 3676373 Nwi_1545 Nitrobacter winogradskyi Nb-255 phage terminase YP_318158.1 1691040 R 323098 CDS YP_318159.1 75675738 3676374 complement(1692841..1694253) 1 NC_007406.1 DNA methylase N-4/N-6 1694253 3676374 Nwi_1546 Nitrobacter winogradskyi Nb-255 DNA methylase N-4/N-6 YP_318159.1 1692841 R 323098 CDS YP_318160.1 75675739 3676375 complement(1694228..1694698) 1 NC_007406.1 hypothetical protein 1694698 3676375 Nwi_1547 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318160.1 1694228 R 323098 CDS YP_318161.1 75675740 3676376 complement(1694944..1695330) 1 NC_007406.1 hypothetical protein 1695330 3676376 Nwi_1548 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318161.1 1694944 R 323098 CDS YP_318162.1 75675741 3676377 complement(1695554..1696258) 1 NC_007406.1 transcription antitermination protein nusG 1696258 3676377 Nwi_1549 Nitrobacter winogradskyi Nb-255 transcription antitermination protein nusG YP_318162.1 1695554 R 323098 CDS YP_318163.1 75675742 3676378 complement(1696255..1697451) 1 NC_007406.1 hypothetical protein 1697451 3676378 Nwi_1550 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318163.1 1696255 R 323098 CDS YP_318164.1 75675743 3676379 complement(1697448..1697840) 1 NC_007406.1 hypothetical protein 1697840 3676379 Nwi_1551 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318164.1 1697448 R 323098 CDS YP_318165.1 75675744 3676380 complement(1697837..1698571) 1 NC_007406.1 hypothetical protein 1698571 3676380 Nwi_1552 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318165.1 1697837 R 323098 CDS YP_318166.1 75675745 3674457 complement(1698774..1699316) 1 NC_007406.1 hypothetical protein 1699316 3674457 Nwi_1553 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318166.1 1698774 R 323098 CDS YP_318167.1 75675746 3674793 complement(1699313..1701565) 1 NC_007406.1 hypothetical protein 1701565 3674793 Nwi_1554 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318167.1 1699313 R 323098 CDS YP_318168.1 75675747 3676758 complement(1701562..1702095) 1 NC_007406.1 hypothetical protein 1702095 3676758 Nwi_1555 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318168.1 1701562 R 323098 CDS YP_318169.1 75675748 3676759 complement(1702092..1702367) 1 NC_007406.1 hypothetical protein 1702367 3676759 Nwi_1556 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318169.1 1702092 R 323098 CDS YP_318170.1 75675749 3676760 complement(1702512..1703132) 1 NC_007406.1 hypothetical protein 1703132 3676760 Nwi_1557 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318170.1 1702512 R 323098 CDS YP_318171.1 75675750 3676761 1703255..1703527 1 NC_007406.1 hypothetical protein 1703527 3676761 Nwi_1558 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318171.1 1703255 D 323098 CDS YP_318172.1 75675751 3676762 complement(1703752..1704144) 1 NC_007406.1 hypothetical protein 1704144 3676762 Nwi_1559 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318172.1 1703752 R 323098 CDS YP_318173.1 75675752 3676763 1704243..1704515 1 NC_007406.1 hypothetical protein 1704515 3676763 Nwi_1560 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318173.1 1704243 D 323098 CDS YP_318174.1 75675753 3676764 1705281..1705526 1 NC_007406.1 hypothetical protein 1705526 3676764 Nwi_1561 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318174.1 1705281 D 323098 CDS YP_318175.1 75675754 3676765 1705612..1705842 1 NC_007406.1 hypothetical protein 1705842 3676765 Nwi_1562 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318175.1 1705612 D 323098 CDS YP_318176.1 75675755 3676766 1705839..1706108 1 NC_007406.1 hypothetical protein 1706108 3676766 Nwi_1563 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318176.1 1705839 D 323098 CDS YP_318177.1 75675756 3676767 1706301..1707560 1 NC_007406.1 phage Gp37Gp68 1707560 3676767 Nwi_1564 Nitrobacter winogradskyi Nb-255 phage Gp37Gp68 YP_318177.1 1706301 D 323098 CDS YP_318178.1 75675757 3676768 1708146..1709396 1 NC_007406.1 phage integrase 1709396 3676768 Nwi_1565 Nitrobacter winogradskyi Nb-255 phage integrase YP_318178.1 1708146 D 323098 CDS YP_318179.1 75675758 3676770 complement(1709491..1709982) 1 NC_007406.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 1709982 3676770 Nwi_1566 Nitrobacter winogradskyi Nb-255 single-stranded DNA-binding protein YP_318179.1 1709491 R 323098 CDS YP_318180.1 75675759 3676771 1710440..1711216 1 NC_007406.1 outer-membrane protein precursor 1711216 3676771 Nwi_1567 Nitrobacter winogradskyi Nb-255 outer-membrane protein precursor YP_318180.1 1710440 D 323098 CDS YP_318181.1 75675760 3676772 1711725..1714706 1 NC_007406.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 1714706 uvrA 3676772 uvrA Nitrobacter winogradskyi Nb-255 excinuclease ABC subunit A YP_318181.1 1711725 D 323098 CDS YP_318182.1 75675761 3676773 1714929..1715564 1 NC_007406.1 hypothetical protein 1715564 3676773 Nwi_1569 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318182.1 1714929 D 323098 CDS YP_318183.1 75675762 3676774 1715982..1716251 1 NC_007406.1 hypothetical protein 1716251 3676774 Nwi_1570 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318183.1 1715982 D 323098 CDS YP_318184.1 75675763 3676775 1716361..1720158 1 NC_007406.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1720158 3676775 Nwi_1571 Nitrobacter winogradskyi Nb-255 ribonucleotide-diphosphate reductase subunit alpha YP_318184.1 1716361 D 323098 CDS YP_318185.1 75675764 3676738 complement(1720430..1721335) 1 NC_007406.1 integrase, catalytic region 1721335 3676738 Nwi_1572 Nitrobacter winogradskyi Nb-255 integrase, catalytic region YP_318185.1 1720430 R 323098 CDS YP_318186.1 75675765 3676739 complement(1721332..1721661) 1 NC_007406.1 transposase IS3/IS911 1721661 3676739 Nwi_1573 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_318186.1 1721332 R 323098 CDS YP_318187.1 75675766 3676740 1722016..1722264 1 NC_007406.1 hypothetical protein 1722264 3676740 Nwi_1574 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318187.1 1722016 D 323098 CDS YP_318188.1 75675767 3676741 complement(1722783..1723493) 1 NC_007406.1 polyphosphate glucokinase 1723493 3676741 Nwi_1575 Nitrobacter winogradskyi Nb-255 polyphosphate glucokinase YP_318188.1 1722783 R 323098 CDS YP_318189.1 75675768 3676742 1723767..1724639 1 NC_007406.1 YghU; B2989; one of eight glutathione transferases from E. coli; glutathione S-transferase YghU 1724639 3676742 Nwi_1576 Nitrobacter winogradskyi Nb-255 glutathione S-transferase YghU YP_318189.1 1723767 D 323098 CDS YP_318190.1 75675769 3676743 1724688..1725368 1 NC_007406.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 1725368 fabG 3676743 fabG Nitrobacter winogradskyi Nb-255 3-ketoacyl-ACP reductase YP_318190.1 1724688 D 323098 CDS YP_318191.1 75675770 3676744 1725674..1726216 1 NC_007406.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 1726216 3676744 Nwi_1578 Nitrobacter winogradskyi Nb-255 3-hydroxydecanoyl-ACP dehydratase YP_318191.1 1725674 D 323098 CDS YP_318192.1 75675771 3676745 1726254..1726931 1 NC_007406.1 hypothetical protein 1726931 3676745 Nwi_1579 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318192.1 1726254 D 323098 CDS YP_318193.1 75675772 3676746 complement(1726969..1727220) 1 NC_007406.1 hypothetical protein 1727220 3676746 Nwi_1580 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318193.1 1726969 R 323098 CDS YP_318194.1 75675773 3676747 1727286..1727585 1 NC_007406.1 hypothetical protein 1727585 3676747 Nwi_1581 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318194.1 1727286 D 323098 CDS YP_318195.1 75675774 3676748 1727883..1728134 1 NC_007406.1 hypothetical protein 1728134 3676748 Nwi_1582 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318195.1 1727883 D 323098 CDS YP_318196.1 75675775 3676749 complement(1728296..1728856) 1 NC_007406.1 CreA 1728856 3676749 Nwi_1583 Nitrobacter winogradskyi Nb-255 CreA YP_318196.1 1728296 R 323098 CDS YP_318197.1 75675776 3676750 1729058..1730539 1 NC_007406.1 hypothetical protein 1730539 3676750 Nwi_1584 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318197.1 1729058 D 323098 CDS YP_318198.1 75675777 3676751 1730712..1731638 1 NC_007406.1 polysaccharide deacetylase 1731638 3676751 Nwi_1585 Nitrobacter winogradskyi Nb-255 polysaccharide deacetylase YP_318198.1 1730712 D 323098 CDS YP_318199.1 75675778 3676752 1731660..1732208 1 NC_007406.1 hypothetical protein 1732208 3676752 Nwi_1586 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318199.1 1731660 D 323098 CDS YP_318200.1 75675779 3676753 complement(1732241..1734523) 1 NC_007406.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 1734523 3676753 Nwi_1587 Nitrobacter winogradskyi Nb-255 malic enzyme YP_318200.1 1732241 R 323098 CDS YP_318201.1 75675780 3676754 complement(1734710..1736482) 1 NC_007406.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 1736482 aspS 3676754 aspS Nitrobacter winogradskyi Nb-255 aspartyl-tRNA synthetase YP_318201.1 1734710 R 323098 CDS YP_318202.1 75675781 3676755 1736709..1737857 1 NC_007406.1 ribonuclease D 1737857 3676755 Nwi_1589 Nitrobacter winogradskyi Nb-255 ribonuclease D YP_318202.1 1736709 D 323098 CDS YP_318203.1 75675782 3676756 complement(1737934..1739244) 1 NC_007406.1 hemolysins and-like proteins 1739244 3676756 Nwi_1590 Nitrobacter winogradskyi Nb-255 hemolysins and-like proteins YP_318203.1 1737934 R 323098 CDS YP_318204.1 75675783 3676757 1739782..1740180 1 NC_007406.1 transposase 1740180 3676757 Nwi_1591 Nitrobacter winogradskyi Nb-255 transposase YP_318204.1 1739782 D 323098 CDS YP_318205.1 75675784 3675964 1740195..1740563 1 NC_007406.1 transposase, IS4 1740563 3675964 Nwi_1592 Nitrobacter winogradskyi Nb-255 transposase, IS4 YP_318205.1 1740195 D 323098 CDS YP_318206.1 75675785 3675965 complement(1740577..1742166) 1 NC_007406.1 Ppx/GppA phosphatase 1742166 3675965 Nwi_1593 Nitrobacter winogradskyi Nb-255 Ppx/GppA phosphatase YP_318206.1 1740577 R 323098 CDS YP_318207.1 75675786 3675966 complement(1742096..1744297) 1 NC_007406.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 1744297 3675966 Nwi_1594 Nitrobacter winogradskyi Nb-255 polyphosphate kinase YP_318207.1 1742096 R 323098 CDS YP_318208.1 75675787 3675967 complement(1744543..1745223) 1 NC_007406.1 hypothetical protein 1745223 3675967 Nwi_1595 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318208.1 1744543 R 323098 CDS YP_318209.1 75675788 3675968 complement(1745269..1745811) 1 NC_007406.1 CDP-alcohol phosphatidyltransferase 1745811 3675968 Nwi_1596 Nitrobacter winogradskyi Nb-255 CDP-alcohol phosphatidyltransferase YP_318209.1 1745269 R 323098 CDS YP_318210.1 75675789 3675969 1746047..1747120 1 NC_007406.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1747120 3675969 Nwi_1597 Nitrobacter winogradskyi Nb-255 phosphoribosylaminoimidazole synthetase YP_318210.1 1746047 D 323098 CDS YP_318211.1 75675790 3675970 1747145..1747798 1 NC_007406.1 phosphoribosylglycinamide formyltransferase 1747798 3675970 Nwi_1598 Nitrobacter winogradskyi Nb-255 phosphoribosylglycinamide formyltransferase YP_318211.1 1747145 D 323098 CDS YP_318212.1 75675791 3675971 complement(1748019..1748222) 1 NC_007406.1 cold-shock protein, DNA-binding 1748222 3675971 Nwi_1599 Nitrobacter winogradskyi Nb-255 cold-shock protein, DNA-binding YP_318212.1 1748019 R 323098 CDS YP_318213.1 75675792 3675972 complement(1748580..1749458) 1 NC_007406.1 hypothetical protein 1749458 3675972 Nwi_1600 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318213.1 1748580 R 323098 CDS YP_318214.1 75675793 3675973 complement(1749790..1750212) 1 NC_007406.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 1750212 ndk 3675973 ndk Nitrobacter winogradskyi Nb-255 nucleoside diphosphate kinase YP_318214.1 1749790 R 323098 CDS YP_318215.1 75675794 3675974 complement(1750202..1750564) 1 NC_007406.1 hypothetical protein 1750564 3675974 Nwi_1602 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318215.1 1750202 R 323098 CDS YP_318216.1 75675795 3675975 1750536..1750742 1 NC_007406.1 hypothetical protein 1750742 3675975 Nwi_1603 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318216.1 1750536 D 323098 CDS YP_318217.1 75675796 3675976 complement(1750796..1752802) 1 NC_007406.1 carbamoyl-phosphate synthetase large chain 1752802 3675976 Nwi_1604 Nitrobacter winogradskyi Nb-255 carbamoyl-phosphate synthetase large chain YP_318217.1 1750796 R 323098 CDS YP_318218.1 75675797 3675977 complement(1752805..1754409) 1 NC_007406.1 carboxyl transferase 1754409 3675977 Nwi_1605 Nitrobacter winogradskyi Nb-255 carboxyl transferase YP_318218.1 1752805 R 323098 CDS YP_318219.1 75675798 3675978 complement(1754644..1754991) 1 NC_007406.1 ETC complex I subunit region 1754991 3675978 Nwi_1606 Nitrobacter winogradskyi Nb-255 ETC complex I subunit region YP_318219.1 1754644 R 323098 CDS YP_318220.1 75675799 3675979 complement(1755207..1755557) 1 NC_007406.1 hypothetical protein 1755557 3675979 Nwi_1607 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318220.1 1755207 R 323098 CDS YP_318221.1 75675800 3675981 complement(1755802..1756293) 1 NC_007406.1 hypothetical protein 1756293 3675981 Nwi_1608 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318221.1 1755802 R 323098 CDS YP_318222.1 75675801 3675346 complement(1756446..1757099) 1 NC_007406.1 cold-shock protein, DNA-binding 1757099 3675346 Nwi_1609 Nitrobacter winogradskyi Nb-255 cold-shock protein, DNA-binding YP_318222.1 1756446 R 323098 CDS YP_318223.1 75675802 3675347 complement(1757849..1758295) 1 NC_007406.1 hypothetical protein 1758295 3675347 Nwi_1610 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318223.1 1757849 R 323098 CDS YP_318224.1 75675803 3675348 1758734..1759183 1 NC_007406.1 glyoxalase/bleomycin resistance protein/dioxygenase 1759183 3675348 Nwi_1611 Nitrobacter winogradskyi Nb-255 glyoxalase/bleomycin resistance protein/dioxygenase YP_318224.1 1758734 D 323098 CDS YP_318225.1 75675804 3675350 1760317..1760694 1 NC_007406.1 hypothetical protein 1760694 3675350 Nwi_1612 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318225.1 1760317 D 323098 CDS YP_318226.1 75675805 3675351 1760682..1761527 1 NC_007406.1 hypothetical protein 1761527 3675351 Nwi_1613 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318226.1 1760682 D 323098 CDS YP_318227.1 75675806 3675352 complement(1761538..1761933) 1 NC_007406.1 hypothetical protein 1761933 3675352 Nwi_1614 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318227.1 1761538 R 323098 CDS YP_318228.1 75675807 3675353 complement(1761930..1763945) 1 NC_007406.1 hypothetical protein 1763945 3675353 Nwi_1615 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318228.1 1761930 R 323098 CDS YP_318229.1 75675808 3675354 complement(1763947..1765560) 1 NC_007406.1 phage terminase 1765560 3675354 Nwi_1616 Nitrobacter winogradskyi Nb-255 phage terminase YP_318229.1 1763947 R 323098 CDS YP_318230.1 75675809 3675355 complement(1765560..1765955) 1 NC_007406.1 phage terminase, small subunit , P27 1765955 3675355 Nwi_1617 Nitrobacter winogradskyi Nb-255 phage terminase, small subunit , P27 YP_318230.1 1765560 R 323098 CDS YP_318231.1 75675810 3675356 complement(1765955..1767004) 1 NC_007406.1 hypothetical protein 1767004 3675356 Nwi_1618 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318231.1 1765955 R 323098 CDS YP_318232.1 75675811 3675357 complement(1767111..1767440) 1 NC_007406.1 phage head-tail adaptor 1767440 3675357 Nwi_1619 Nitrobacter winogradskyi Nb-255 phage head-tail adaptor YP_318232.1 1767111 R 323098 CDS YP_318233.1 75675812 3675358 complement(1767422..1767856) 1 NC_007406.1 hypothetical protein 1767856 3675358 Nwi_1620 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318233.1 1767422 R 323098 CDS YP_318234.1 75675813 3675359 complement(1767853..1768278) 1 NC_007406.1 Phage protein, HK97, gp10 1768278 3675359 Nwi_1621 Nitrobacter winogradskyi Nb-255 Phage protein, HK97, gp10 YP_318234.1 1767853 R 323098 CDS YP_318235.1 75675814 3675360 complement(1768268..1768588) 1 NC_007406.1 phage protein DNA packaging protein 1768588 3675360 Nwi_1622 Nitrobacter winogradskyi Nb-255 phage protein DNA packaging protein YP_318235.1 1768268 R 323098 CDS YP_318236.1 75675815 3675361 complement(1768585..1768896) 1 NC_007406.1 hypothetical protein 1768896 3675361 Nwi_1623 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318236.1 1768585 R 323098 CDS YP_318237.1 75675816 3675362 complement(1769326..1769718) 1 NC_007406.1 hypothetical protein 1769718 3675362 Nwi_1624 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318237.1 1769326 R 323098 CDS YP_318238.1 75675817 3675363 complement(1769731..1770888) 1 NC_007406.1 Phage major capsid protein, HK97 1770888 3675363 Nwi_1625 Nitrobacter winogradskyi Nb-255 Phage major capsid protein, HK97 YP_318238.1 1769731 R 323098 CDS YP_318239.1 75675818 3675418 complement(1770894..1771391) 1 NC_007406.1 peptidase U35 1771391 3675418 Nwi_1626 Nitrobacter winogradskyi Nb-255 peptidase U35 YP_318239.1 1770894 R 323098 CDS YP_318240.1 75675819 3675419 complement(1771573..1771962) 1 NC_007406.1 hypothetical protein 1771962 3675419 Nwi_1627 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318240.1 1771573 R 323098 CDS YP_318241.1 75675820 3675420 complement(1771955..1773133) 1 NC_007406.1 Phage portal protein, HK97 1773133 3675420 Nwi_1628 Nitrobacter winogradskyi Nb-255 Phage portal protein, HK97 YP_318241.1 1771955 R 323098 CDS YP_318242.1 75675821 3675421 complement(1773840..1775840) 1 NC_007406.1 ATPase 1775840 3675421 Nwi_1629 Nitrobacter winogradskyi Nb-255 ATPase YP_318242.1 1773840 R 323098 CDS YP_318243.1 75675822 3675422 complement(1775898..1776137) 1 NC_007406.1 hypothetical protein 1776137 3675422 Nwi_1630 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318243.1 1775898 R 323098 CDS YP_318244.1 75675823 3675423 complement(1776134..1776400) 1 NC_007406.1 hypothetical protein 1776400 3675423 Nwi_1631 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318244.1 1776134 R 323098 CDS YP_318245.1 75675824 3675424 complement(1776397..1776714) 1 NC_007406.1 hypothetical protein 1776714 3675424 Nwi_1632 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318245.1 1776397 R 323098 CDS YP_318246.1 75675825 3675425 complement(1776736..1777824) 1 NC_007406.1 phage integrase 1777824 3675425 Nwi_1633 Nitrobacter winogradskyi Nb-255 phage integrase YP_318246.1 1776736 R 323098 CDS YP_318247.1 75675826 3675426 1778303..1778728 1 NC_007406.1 hypothetical protein 1778728 3675426 Nwi_1634 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318247.1 1778303 D 323098 CDS YP_318248.1 75675827 3675427 1779076..1779450 1 NC_007406.1 hypothetical protein 1779450 3675427 Nwi_1635 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318248.1 1779076 D 323098 CDS YP_318249.1 75675828 3675428 1779756..1780046 1 NC_007406.1 hypothetical protein 1780046 3675428 Nwi_1636 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318249.1 1779756 D 323098 CDS YP_318250.1 75675829 3675429 complement(1780153..1780719) 1 NC_007406.1 hypothetical protein 1780719 3675429 Nwi_1637 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318250.1 1780153 R 323098 CDS YP_318251.1 75675830 3675430 complement(1780899..1781711) 1 NC_007406.1 PA-phosphatase-like phosphoesterase 1781711 3675430 Nwi_1638 Nitrobacter winogradskyi Nb-255 PA-phosphatase-like phosphoesterase YP_318251.1 1780899 R 323098 CDS YP_318252.1 75675831 3675431 1781949..1782251 1 NC_007406.1 hypothetical protein 1782251 3675431 Nwi_1639 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318252.1 1781949 D 323098 CDS YP_318253.1 75675832 3675432 complement(1782515..1782775) 1 NC_007406.1 hypothetical protein 1782775 3675432 Nwi_1640 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318253.1 1782515 R 323098 CDS YP_318254.1 75675833 3675433 complement(1782884..1783984) 1 NC_007406.1 hypothetical protein 1783984 3675433 Nwi_1641 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318254.1 1782884 R 323098 CDS YP_318255.1 75675834 3675434 complement(1783981..1785024) 1 NC_007406.1 tRNA synthetase 1785024 3675434 Nwi_1642 Nitrobacter winogradskyi Nb-255 tRNA synthetase YP_318255.1 1783981 R 323098 CDS YP_318256.1 75675835 3675435 1785169..1785735 1 NC_007406.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 1785735 3675435 Nwi_1643 Nitrobacter winogradskyi Nb-255 elongation factor P YP_318256.1 1785169 D 323098 CDS YP_318257.1 75675836 3675436 1785805..1787028 1 NC_007406.1 lytic murein transglycosylase 1787028 3675436 Nwi_1644 Nitrobacter winogradskyi Nb-255 lytic murein transglycosylase YP_318257.1 1785805 D 323098 CDS YP_318258.1 75675837 3675437 complement(1787070..1788911) 1 NC_007406.1 RecJ exonuclease 1788911 3675437 Nwi_1645 Nitrobacter winogradskyi Nb-255 RecJ exonuclease YP_318258.1 1787070 R 323098 CDS YP_318259.1 75675838 3675291 complement(1788963..1789958) 1 NC_007406.1 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 1789958 glpX 3675291 glpX Nitrobacter winogradskyi Nb-255 fructose 1,6-bisphosphatase II YP_318259.1 1788963 R 323098 CDS YP_318260.1 75675839 3675292 complement(1790019..1791341) 1 NC_007406.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1791341 3675292 Nwi_1647 Nitrobacter winogradskyi Nb-255 homoserine dehydrogenase YP_318260.1 1790019 R 323098 CDS YP_318261.1 75675840 3675293 complement(1791418..1792635) 1 NC_007406.1 aminotransferase 1792635 3675293 Nwi_1648 Nitrobacter winogradskyi Nb-255 aminotransferase YP_318261.1 1791418 R 323098 CDS YP_318262.1 75675841 3675294 complement(1792871..1793176) 1 NC_007406.1 hypothetical protein 1793176 3675294 Nwi_1649 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318262.1 1792871 R 323098 CDS YP_318263.1 75675842 3674635 1793436..1795265 1 NC_007406.1 Poly(R)-hydroxyalkanoic acid synthase, class I 1795265 3674635 Nwi_1650 Nitrobacter winogradskyi Nb-255 Poly(R)-hydroxyalkanoic acid synthase, class I YP_318263.1 1793436 D 323098 CDS YP_318264.1 75675843 3675386 complement(1795351..1796379) 1 NC_007406.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis; N-acetyl-gamma-glutamyl-phosphate reductase 1796379 3675386 Nwi_1651 Nitrobacter winogradskyi Nb-255 N-acetyl-gamma-glutamyl-phosphate reductase YP_318264.1 1795351 R 323098 CDS YP_318265.1 75675844 3675387 complement(1796464..1796994) 1 NC_007406.1 hypothetical protein 1796994 3675387 Nwi_1652 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318265.1 1796464 R 323098 CDS YP_318266.1 75675845 3675388 1797177..1799234 1 NC_007406.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 1799234 3675388 Nwi_1653 Nitrobacter winogradskyi Nb-255 DNA topoisomerase IV subunit B YP_318266.1 1797177 D 323098 CDS YP_318267.1 75675846 3675389 1799369..1799779 1 NC_007406.1 glyoxalase/bleomycin resistance protein/dioxygenase 1799779 3675389 Nwi_1654 Nitrobacter winogradskyi Nb-255 glyoxalase/bleomycin resistance protein/dioxygenase YP_318267.1 1799369 D 323098 CDS YP_318268.1 75675847 3675390 complement(1799818..1801077) 1 NC_007406.1 hypothetical protein 1801077 3675390 Nwi_1655 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318268.1 1799818 R 323098 CDS YP_318269.1 75675848 3675391 complement(1801104..1802603) 1 NC_007406.1 peptidase C14, caspase catalytic subunit p20 1802603 3675391 Nwi_1656 Nitrobacter winogradskyi Nb-255 peptidase C14, caspase catalytic subunit p20 YP_318269.1 1801104 R 323098 CDS YP_318270.1 75675849 3675392 1802960..1804411 1 NC_007406.1 DEAD/DEAH box helicase 1804411 3675392 Nwi_1657 Nitrobacter winogradskyi Nb-255 DEAD/DEAH box helicase YP_318270.1 1802960 D 323098 CDS YP_318271.1 75675850 3675393 1804565..1805629 1 NC_007406.1 diguanylate cyclase 1805629 3675393 Nwi_1658 Nitrobacter winogradskyi Nb-255 diguanylate cyclase YP_318271.1 1804565 D 323098 CDS YP_318272.1 75675851 3675394 complement(1805905..1806309) 1 NC_007406.1 HesB/YadR/YfhF 1806309 3675394 Nwi_1659 Nitrobacter winogradskyi Nb-255 HesB/YadR/YfhF YP_318272.1 1805905 R 323098 CDS YP_318273.1 75675852 3675395 complement(1806368..1806748) 1 NC_007406.1 hypothetical protein 1806748 3675395 Nwi_1660 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318273.1 1806368 R 323098 CDS YP_318274.1 75675853 3675396 complement(1806745..1807989) 1 NC_007406.1 cysteine desulfurase 1807989 3675396 Nwi_1661 Nitrobacter winogradskyi Nb-255 cysteine desulfurase YP_318274.1 1806745 R 323098 CDS YP_318275.1 75675854 3675397 complement(1808154..1809476) 1 NC_007406.1 FeS assembly protein SufD 1809476 3675397 Nwi_1662 Nitrobacter winogradskyi Nb-255 FeS assembly protein SufD YP_318275.1 1808154 R 323098 CDS YP_318276.1 75675855 3675398 complement(1809540..1810289) 1 NC_007406.1 FeS assembly ATPase SufC 1810289 3675398 Nwi_1663 Nitrobacter winogradskyi Nb-255 FeS assembly ATPase SufC YP_318276.1 1809540 R 323098 CDS YP_318277.1 75675856 3675399 complement(1810433..1811914) 1 NC_007406.1 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase 1811914 3675399 Nwi_1664 Nitrobacter winogradskyi Nb-255 cysteine desulfurase YP_318277.1 1810433 R 323098 CDS YP_318278.1 75675857 3674697 complement(1811995..1813176) 1 NC_007406.1 cysteine sulfinate desulfinase/cysteine desulfurase 1813176 3674697 Nwi_1665 Nitrobacter winogradskyi Nb-255 cysteine sulfinate desulfinase/cysteine desulfurase YP_318278.1 1811995 R 323098 CDS YP_318279.1 75675858 3674698 1813358..1814005 1 NC_007406.1 hypothetical protein 1814005 3674698 Nwi_1666 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318279.1 1813358 D 323098 CDS YP_318280.1 75675859 3674699 complement(1814056..1815156) 1 NC_007406.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 1815156 anmK 3674699 anmK Nitrobacter winogradskyi Nb-255 anhydro-N-acetylmuramic acid kinase YP_318280.1 1814056 R 323098 CDS YP_318281.1 75675860 3674700 1815311..1816564 1 NC_007406.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 1816564 3674700 Nwi_1668 Nitrobacter winogradskyi Nb-255 tyrosyl-tRNA synthetase YP_318281.1 1815311 D 323098 CDS YP_318282.1 75675861 3674701 complement(1816589..1820221) 1 NC_007406.1 hypothetical protein 1820221 3674701 Nwi_1669 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318282.1 1816589 R 323098 CDS YP_318283.1 75675862 3674702 1820445..1821074 1 NC_007406.1 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1821074 3674702 Nwi_1670 Nitrobacter winogradskyi Nb-255 alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen YP_318283.1 1820445 D 323098 CDS YP_318284.1 75675863 3674703 1821175..1822539 1 NC_007406.1 peptidase M23B 1822539 3674703 Nwi_1671 Nitrobacter winogradskyi Nb-255 peptidase M23B YP_318284.1 1821175 D 323098 CDS YP_318285.1 75675864 3674704 complement(1822719..1822991) 1 NC_007406.1 hypothetical protein 1822991 3674704 Nwi_1672 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318285.1 1822719 R 323098 CDS YP_318286.1 75675865 3674705 1823066..1824943 1 NC_007406.1 ABC transporter ATPase 1824943 3674705 Nwi_1673 Nitrobacter winogradskyi Nb-255 ABC transporter ATPase YP_318286.1 1823066 D 323098 CDS YP_318287.1 75675866 3674706 complement(1825077..1825634) 1 NC_007406.1 hypothetical protein 1825634 3674706 Nwi_1674 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318287.1 1825077 R 323098 CDS YP_318288.1 75675867 3674707 complement(1825764..1826216) 1 NC_007406.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 1826216 3674707 Nwi_1675 Nitrobacter winogradskyi Nb-255 DNA polymerase III subunit chi YP_318288.1 1825764 R 323098 CDS YP_318289.1 75675868 3674708 complement(1826213..1827715) 1 NC_007406.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 1827715 3674708 Nwi_1676 Nitrobacter winogradskyi Nb-255 leucyl aminopeptidase YP_318289.1 1826213 R 323098 CDS YP_318290.1 75675869 3674709 1828078..1829250 1 NC_007406.1 permease YjgP/YjgQ 1829250 3674709 Nwi_1677 Nitrobacter winogradskyi Nb-255 permease YjgP/YjgQ YP_318290.1 1828078 D 323098 CDS YP_318291.1 75675870 3674710 1829247..1830344 1 NC_007406.1 permease YjgP/YjgQ 1830344 3674710 Nwi_1678 Nitrobacter winogradskyi Nb-255 permease YjgP/YjgQ YP_318291.1 1829247 D 323098 CDS YP_318292.1 75675871 3674711 1830344..1832833 1 NC_007406.1 organic solvent tolerance protein 1832833 3674711 Nwi_1679 Nitrobacter winogradskyi Nb-255 organic solvent tolerance protein YP_318292.1 1830344 D 323098 CDS YP_318293.1 75675872 3674712 1833024..1833968 1 NC_007406.1 hypothetical protein 1833968 3674712 Nwi_1680 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318293.1 1833024 D 323098 CDS YP_318294.1 75675873 3674713 1834071..1835078 1 NC_007406.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 1835078 pdxA 3674713 pdxA Nitrobacter winogradskyi Nb-255 4-hydroxythreonine-4-phosphate dehydrogenase YP_318294.1 1834071 D 323098 CDS YP_318295.1 75675874 3674714 1835075..1835938 1 NC_007406.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1835938 ksgA 3674714 ksgA Nitrobacter winogradskyi Nb-255 dimethyladenosine transferase YP_318295.1 1835075 D 323098 CDS YP_318296.1 75675875 3674715 complement(1835935..1836594) 1 NC_007406.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 1836594 gmk 3674715 gmk Nitrobacter winogradskyi Nb-255 guanylate kinase YP_318296.1 1835935 R 323098 CDS YP_318297.1 75675876 3674716 complement(1836598..1837485) 1 NC_007406.1 hypothetical protein 1837485 3674716 Nwi_1684 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318297.1 1836598 R 323098 CDS YP_318298.1 75675877 3674539 complement(1837922..1839145) 1 NC_007406.1 aminodeoxychorismate lyase 1839145 3674539 Nwi_1685 Nitrobacter winogradskyi Nb-255 aminodeoxychorismate lyase YP_318298.1 1837922 R 323098 CDS YP_318299.1 75675878 3674540 complement(1839271..1840536) 1 NC_007406.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 1840536 3674540 Nwi_1686 Nitrobacter winogradskyi Nb-255 3-oxoacyl-ACP synthase YP_318299.1 1839271 R 323098 CDS YP_318300.1 75675879 3674541 complement(1840631..1840870) 1 NC_007406.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 1840870 acpP 3674541 acpP Nitrobacter winogradskyi Nb-255 acyl carrier protein YP_318300.1 1840631 R 323098 CDS YP_318301.1 75675880 3674542 complement(1841145..1841882) 1 NC_007406.1 3-oxoacyl-ACP reductase 1841882 3674542 Nwi_1688 Nitrobacter winogradskyi Nb-255 3-oxoacyl-ACP reductase YP_318301.1 1841145 R 323098 CDS YP_318302.1 75675881 3674543 1842250..1842513 1 NC_007406.1 hypothetical protein 1842513 3674543 Nwi_1689 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318302.1 1842250 D 323098 CDS YP_318303.1 75675882 3674544 complement(1842571..1843524) 1 NC_007406.1 ACP S-malonyltransferase 1843524 3674544 Nwi_1690 Nitrobacter winogradskyi Nb-255 ACP S-malonyltransferase YP_318303.1 1842571 R 323098 CDS YP_318304.1 75675883 3674545 1843900..1844319 1 NC_007406.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 1844319 rpsF 3674545 rpsF Nitrobacter winogradskyi Nb-255 30S ribosomal protein S6 YP_318304.1 1843900 D 323098 CDS YP_318305.1 75675884 3674546 1844325..1844564 1 NC_007406.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 1844564 rpsR 3674546 rpsR Nitrobacter winogradskyi Nb-255 30S ribosomal protein S18 YP_318305.1 1844325 D 323098 CDS YP_318306.1 75675885 3674547 1844698..1845708 1 NC_007406.1 hypothetical protein 1845708 3674547 Nwi_1693 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318306.1 1844698 D 323098 CDS YP_318307.1 75675886 3677206 1845747..1846355 1 NC_007406.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 1846355 rplI 3677206 rplI Nitrobacter winogradskyi Nb-255 50S ribosomal protein L9 YP_318307.1 1845747 D 323098 CDS YP_318308.1 75675887 3675295 complement(1846728..1849133) 1 NC_007406.1 ATPase AAA 1849133 3675295 Nwi_1695 Nitrobacter winogradskyi Nb-255 ATPase AAA YP_318308.1 1846728 R 323098 CDS YP_318309.1 75675888 3675719 complement(1849386..1849796) 1 NC_007406.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 1849796 clpS 3675719 clpS Nitrobacter winogradskyi Nb-255 ATP-dependent Clp protease adaptor protein ClpS YP_318309.1 1849386 R 323098 CDS YP_318310.1 75675889 3675720 1850246..1852063 1 NC_007406.1 hypothetical protein 1852063 3675720 Nwi_1697 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318310.1 1850246 D 323098 CDS YP_318311.1 75675890 3675721 complement(1852240..1852578) 1 NC_007406.1 hypothetical protein 1852578 3675721 Nwi_1698 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318311.1 1852240 R 323098 CDS YP_318312.1 75675891 3675722 1852951..1854714 1 NC_007406.1 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 1854714 3675722 Nwi_1699 Nitrobacter winogradskyi Nb-255 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 YP_318312.1 1852951 D 323098 CDS YP_318313.1 75675892 3675723 complement(1855052..1855948) 1 NC_007406.1 molecular chaperone DnaJ 1855948 3675723 Nwi_1700 Nitrobacter winogradskyi Nb-255 molecular chaperone DnaJ YP_318313.1 1855052 R 323098 CDS YP_318314.1 75675893 3675724 complement(1855968..1856732) 1 NC_007406.1 hypothetical protein 1856732 3675724 Nwi_1701 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318314.1 1855968 R 323098 CDS YP_318315.1 75675894 3675725 1857059..1857910 1 NC_007406.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 1857910 panC 3675725 panC Nitrobacter winogradskyi Nb-255 pantoate--beta-alanine ligase YP_318315.1 1857059 D 323098 CDS YP_318316.1 75675895 3675726 complement(1857944..1858408) 1 NC_007406.1 hypothetical protein 1858408 3675726 Nwi_1703 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318316.1 1857944 R 323098 CDS YP_318317.1 75675896 3674717 complement(1858408..1859328) 1 NC_007406.1 hypothetical protein 1859328 3674717 Nwi_1704 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318317.1 1858408 R 323098 CDS YP_318318.1 75675897 3674718 complement(1859830..1860021) 1 NC_007406.1 hypothetical protein 1860021 3674718 Nwi_1705 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318318.1 1859830 R 323098 CDS YP_318319.1 75675898 3674719 complement(1860284..1860940) 1 NC_007406.1 glutathione S-transferase 1860940 3674719 Nwi_1706 Nitrobacter winogradskyi Nb-255 glutathione S-transferase YP_318319.1 1860284 R 323098 CDS YP_318320.1 75675899 3674720 1861190..1861459 1 NC_007406.1 hypothetical protein 1861459 3674720 Nwi_1707 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318320.1 1861190 D 323098 CDS YP_318321.1 75675900 3674721 complement(1861474..1862316) 1 NC_007406.1 hypothetical protein 1862316 3674721 Nwi_1708 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318321.1 1861474 R 323098 CDS YP_318322.1 75675901 3674722 complement(1862329..1862721) 1 NC_007406.1 XRE family transcriptional regulator 1862721 3674722 Nwi_1709 Nitrobacter winogradskyi Nb-255 XRE family transcriptional regulator YP_318322.1 1862329 R 323098 CDS YP_318323.1 75675902 3674723 1862823..1864106 1 NC_007406.1 polysaccharide deacetylase 1864106 3674723 Nwi_1710 Nitrobacter winogradskyi Nb-255 polysaccharide deacetylase YP_318323.1 1862823 D 323098 CDS YP_318324.1 75675903 3674724 complement(1864235..1864468) 1 NC_007406.1 hypothetical protein 1864468 3674724 Nwi_1711 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318324.1 1864235 R 323098 CDS YP_318325.1 75675904 3674725 1864707..1867442 1 NC_007406.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1867442 3674725 Nwi_1712 Nitrobacter winogradskyi Nb-255 DNA topoisomerase I YP_318325.1 1864707 D 323098 CDS YP_318326.1 75675905 3674726 1867458..1869806 1 NC_007406.1 3'-5' exoribonuclease 1869806 3674726 Nwi_1713 Nitrobacter winogradskyi Nb-255 3'-5' exoribonuclease YP_318326.1 1867458 D 323098 CDS YP_318327.1 75675906 3674727 1869803..1870243 1 NC_007406.1 hypothetical protein 1870243 3674727 Nwi_1714 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318327.1 1869803 D 323098 CDS YP_318328.1 75675907 3674728 complement(1870271..1871239) 1 NC_007406.1 peptide chain release factor 2 1871239 3674728 Nwi_1715 Nitrobacter winogradskyi Nb-255 peptide chain release factor 2 YP_318328.1 1870271 R 323098 CDS YP_318329.1 75675908 3674729 complement(1871714..1874209) 1 NC_007406.1 penicillin-binding protein 1A 1874209 3674729 Nwi_1716 Nitrobacter winogradskyi Nb-255 penicillin-binding protein 1A YP_318329.1 1871714 R 323098 CDS YP_318330.1 75675909 3674730 complement(1874527..1875477) 1 NC_007406.1 integrase, catalytic region 1875477 3674730 Nwi_1717 Nitrobacter winogradskyi Nb-255 integrase, catalytic region YP_318330.1 1874527 R 323098 CDS YP_318331.1 75675910 3674731 complement(1875939..1876304) 1 NC_007406.1 ISBm1, transposase orfA 1876304 3674731 Nwi_1718 Nitrobacter winogradskyi Nb-255 ISBm1, transposase orfA YP_318331.1 1875939 R 323098 CDS YP_318332.1 75675911 3674732 complement(1876376..1877644) 1 NC_007406.1 cell wall hydrolase/autolysin 1877644 3674732 Nwi_1719 Nitrobacter winogradskyi Nb-255 cell wall hydrolase/autolysin YP_318332.1 1876376 R 323098 CDS YP_318333.1 75675912 3674733 1878284..1881463 1 NC_007406.1 ribonuclease E and G 1881463 3674733 Nwi_1720 Nitrobacter winogradskyi Nb-255 ribonuclease E and G YP_318333.1 1878284 D 323098 CDS YP_318334.1 75675913 3674734 complement(1881649..1882620) 1 NC_007406.1 thiamine-monophosphate kinase 1882620 3674734 Nwi_1721 Nitrobacter winogradskyi Nb-255 thiamine-monophosphate kinase YP_318334.1 1881649 R 323098 CDS YP_318335.1 75675914 3674735 complement(1882810..1883295) 1 NC_007406.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 1883295 nusB 3674735 nusB Nitrobacter winogradskyi Nb-255 transcription antitermination protein NusB YP_318335.1 1882810 R 323098 CDS YP_318336.1 75675915 3674736 complement(1883303..1883794) 1 NC_007406.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 1883794 ribH 3674736 ribH Nitrobacter winogradskyi Nb-255 6,7-dimethyl-8-ribityllumazine synthase YP_318336.1 1883303 R 323098 CDS YP_318337.2 162139844 3675128 complement(1884465..1885094) 1 NC_007406.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1885094 3675128 Nwi_1724 Nitrobacter winogradskyi Nb-255 riboflavin synthase subunit alpha YP_318337.2 1884465 R 323098 CDS YP_318338.1 75675917 3675129 complement(1885267..1886430) 1 NC_007406.1 riboflavin biosynthesis protein RibD 1886430 3675129 Nwi_1725 Nitrobacter winogradskyi Nb-255 riboflavin biosynthesis protein RibD YP_318338.1 1885267 R 323098 CDS YP_318339.1 75675918 3675130 complement(1886427..1886909) 1 NC_007406.1 transcriptional regulator NrdR 1886909 nrdR 3675130 nrdR Nitrobacter winogradskyi Nb-255 transcriptional regulator NrdR YP_318339.1 1886427 R 323098 CDS YP_318340.1 75675919 3675131 complement(1887041..1888342) 1 NC_007406.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1888342 glyA 3675131 glyA Nitrobacter winogradskyi Nb-255 serine hydroxymethyltransferase YP_318340.1 1887041 R 323098 CDS YP_318341.1 75675920 3675132 complement(1888790..1889089) 1 NC_007406.1 hypothetical protein 1889089 3675132 Nwi_1728 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318341.1 1888790 R 323098 CDS YP_318342.1 75675921 3675133 1889254..1890255 1 NC_007406.1 hypothetical protein 1890255 3675133 Nwi_1729 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318342.1 1889254 D 323098 CDS YP_318343.1 75675922 3675135 complement(1890535..1890828) 1 NC_007406.1 hypothetical protein 1890828 3675135 Nwi_1730 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318343.1 1890535 R 323098 CDS YP_318344.1 75675923 3675136 1890841..1891536 1 NC_007406.1 lipoyl-[acyl-carrier protein]-protein-N-lipoyltransferse; lipoate-protein ligase B; transfers lipoate to apolipoproteins; involved in lipoate metabolism; lipoyltransferase 1891536 lipB 3675136 lipB Nitrobacter winogradskyi Nb-255 lipoyltransferase YP_318344.1 1890841 D 323098 CDS YP_318345.1 75675924 3675137 complement(1891602..1894196) 1 NC_007406.1 TonB-dependent siderophore receptor 1894196 3675137 Nwi_1732 Nitrobacter winogradskyi Nb-255 TonB-dependent siderophore receptor YP_318345.1 1891602 R 323098 CDS YP_318346.1 75675925 3675138 complement(1894312..1895271) 1 NC_007406.1 FecR protein 1895271 3675138 Nwi_1733 Nitrobacter winogradskyi Nb-255 FecR protein YP_318346.1 1894312 R 323098 CDS YP_318347.1 75675926 3675139 complement(1895378..1896088) 1 NC_007406.1 FecI like protein 1896088 3675139 Nwi_1734 Nitrobacter winogradskyi Nb-255 FecI like protein YP_318347.1 1895378 R 323098 CDS YP_318348.1 75675927 3675140 complement(1896134..1896433) 1 NC_007406.1 catalyzes the hydrolysis of acylphosphate; acylphosphatase 1896433 3675140 Nwi_1735 Nitrobacter winogradskyi Nb-255 acylphosphatase YP_318348.1 1896134 R 323098 CDS YP_318349.1 75675928 3675141 complement(1896509..1898524) 1 NC_007406.1 propionyl-coenzyme A carboxylase alpha polypeptide 1898524 3675141 Nwi_1736 Nitrobacter winogradskyi Nb-255 propionyl-coenzyme A carboxylase alpha polypeptide YP_318349.1 1896509 R 323098 CDS YP_318350.1 75675929 3675142 complement(1898742..1899314) 1 NC_007406.1 hypothetical protein 1899314 3675142 Nwi_1737 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318350.1 1898742 R 323098 CDS YP_318351.1 75675930 3675143 1899699..1900358 1 NC_007406.1 alkyl hydroperoxide reductase 1900358 3675143 Nwi_1738 Nitrobacter winogradskyi Nb-255 alkyl hydroperoxide reductase YP_318351.1 1899699 D 323098 CDS YP_318352.1 75675931 3675144 1900674..1901801 1 NC_007406.1 zinc-containing alcohol dehydrogenase superfamily protein 1901801 3675144 Nwi_1739 Nitrobacter winogradskyi Nb-255 zinc-containing alcohol dehydrogenase superfamily protein YP_318352.1 1900674 D 323098 CDS YP_318353.1 75675932 3675145 complement(1901937..1904198) 1 NC_007406.1 adenylyl cyclase class-3/4/guanylyl cyclase 1904198 3675145 Nwi_1740 Nitrobacter winogradskyi Nb-255 adenylyl cyclase class-3/4/guanylyl cyclase YP_318353.1 1901937 R 323098 CDS YP_318354.1 75675933 3676463 complement(1904195..1904491) 1 NC_007406.1 hypothetical protein 1904491 3676463 Nwi_1741 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318354.1 1904195 R 323098 CDS YP_318355.1 75675934 3676464 complement(1904560..1905915) 1 NC_007406.1 hypothetical protein 1905915 3676464 Nwi_1742 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318355.1 1904560 R 323098 CDS YP_318356.1 75675935 3676466 1907081..1907476 1 NC_007406.1 hypothetical protein 1907476 3676466 Nwi_1743 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318356.1 1907081 D 323098 CDS YP_318357.1 75675936 3676467 complement(1907483..1910164) 1 NC_007406.1 Signal transduction histidine kinase 1910164 3676467 Nwi_1744 Nitrobacter winogradskyi Nb-255 Signal transduction histidine kinase YP_318357.1 1907483 R 323098 CDS YP_318358.1 75675937 3676468 complement(1910246..1913743) 1 NC_007406.1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; indolepyruvate ferredoxin oxidoreductase 1913743 3676468 Nwi_1745 Nitrobacter winogradskyi Nb-255 indolepyruvate ferredoxin oxidoreductase YP_318358.1 1910246 R 323098 CDS YP_318359.1 75675938 3676469 1914210..1914473 1 NC_007406.1 hypothetical protein 1914473 3676469 Nwi_1746 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318359.1 1914210 D 323098 CDS YP_318360.1 75675939 3676470 complement(1914909..1917029) 1 NC_007406.1 pyrophosphate-energized proton pump; pyrophosphate-energized inorganic pyrophosphatase; H+-PPase; can cleave pyrophosphate to two phosphates; can generate a proton motive force and drive pyrophosphate synthesis when PMF is sufficient; membrane-bound proton-translocating pyrophosphatase 1917029 hppA 3676470 hppA Nitrobacter winogradskyi Nb-255 membrane-bound proton-translocating pyrophosphatase YP_318360.1 1914909 R 323098 CDS YP_318361.1 75675940 3676471 complement(1917281..1918468) 1 NC_007406.1 class I and II aminotransferase 1918468 3676471 Nwi_1748 Nitrobacter winogradskyi Nb-255 class I and II aminotransferase YP_318361.1 1917281 R 323098 CDS YP_318362.1 75675941 3676472 1918562..1919995 1 NC_007406.1 peptidase M48, Ste24p 1919995 3676472 Nwi_1749 Nitrobacter winogradskyi Nb-255 peptidase M48, Ste24p YP_318362.1 1918562 D 323098 CDS YP_318363.1 75675942 3676473 1920038..1920802 1 NC_007406.1 DSBA oxidoreductase 1920802 3676473 Nwi_1750 Nitrobacter winogradskyi Nb-255 DSBA oxidoreductase YP_318363.1 1920038 D 323098 CDS YP_318364.1 75675943 3676474 1921173..1921643 1 NC_007406.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 1921643 3676474 Nwi_1751 Nitrobacter winogradskyi Nb-255 3-dehydroquinate dehydratase YP_318364.1 1921173 D 323098 CDS YP_318365.1 75675944 3676475 1921685..1922170 1 NC_007406.1 acetyl-CoA biotin carboxyl carrier 1922170 3676475 Nwi_1752 Nitrobacter winogradskyi Nb-255 acetyl-CoA biotin carboxyl carrier YP_318365.1 1921685 D 323098 CDS YP_318366.1 75675945 3676476 1922196..1923551 1 NC_007406.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 1923551 3676476 Nwi_1753 Nitrobacter winogradskyi Nb-255 acetyl-CoA carboxylase biotin carboxylase subunit YP_318366.1 1922196 D 323098 CDS YP_318367.1 75675946 3676477 1923605..1925221 1 NC_007406.1 bacteriophytochrome 1925221 3676477 Nwi_1754 Nitrobacter winogradskyi Nb-255 bacteriophytochrome YP_318367.1 1923605 D 323098 CDS YP_318368.1 75675947 3676478 1925218..1925658 1 NC_007406.1 response regulator receiver 1925658 3676478 Nwi_1755 Nitrobacter winogradskyi Nb-255 response regulator receiver YP_318368.1 1925218 D 323098 CDS YP_318369.1 75675948 3676479 1925655..1926743 1 NC_007406.1 Signal transduction histidine kinase 1926743 3676479 Nwi_1756 Nitrobacter winogradskyi Nb-255 Signal transduction histidine kinase YP_318369.1 1925655 D 323098 CDS YP_318370.1 75675949 3676480 1926936..1927613 1 NC_007406.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 1927613 aat 3676480 aat Nitrobacter winogradskyi Nb-255 leucyl/phenylalanyl-tRNA--protein transferase YP_318370.1 1926936 D 323098 CDS YP_318371.1 75675950 3675638 complement(1927795..1928988) 1 NC_007406.1 hypothetical protein 1928988 3675638 Nwi_1758 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318371.1 1927795 R 323098 CDS YP_318372.1 75675951 3675639 1929123..1930931 1 NC_007406.1 hypothetical protein 1930931 3675639 Nwi_1759 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318372.1 1929123 D 323098 CDS YP_318373.1 75675952 3675640 complement(1930981..1931472) 1 NC_007406.1 Provides the input to the respiratory chain from the NAD-linked dehydrogenases of the citric acid cycle. The complex couples the oxidation of NADH and the reduction of ubiquinone, to the generation of a proton gradient which is then used for ATP synthesis; NADH dehydrogenase 1931472 3675640 Nwi_1760 Nitrobacter winogradskyi Nb-255 NADH dehydrogenase YP_318373.1 1930981 R 323098 CDS YP_318374.1 75675953 3675641 1931834..1932205 1 NC_007406.1 acetyltransferase 1932205 3675641 Nwi_1761 Nitrobacter winogradskyi Nb-255 acetyltransferase YP_318374.1 1931834 D 323098 CDS YP_318375.1 75675954 3675642 complement(1932337..1932711) 1 NC_007406.1 hypothetical protein 1932711 3675642 Nwi_1762 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318375.1 1932337 R 323098 CDS YP_318376.1 75675955 3675643 1933055..1933984 1 NC_007406.1 hypothetical protein 1933984 3675643 Nwi_1763 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318376.1 1933055 D 323098 CDS YP_318377.1 75675956 3675644 1934176..1935609 1 NC_007406.1 TrmFO; Gid; glucose-inhibited division protein; similar to GidA; the gene from Bacillus subtilis encodes a tRNA-methyltransferase that utilizes folate as the carbon donor and bound flavin as reductant; modifies tRNA at position 54 (uridine) of the T-psi loop to form a C5-methyluridine; tRNA (uracil-5-)-methyltransferase Gid 1935609 3675644 Nwi_1764 Nitrobacter winogradskyi Nb-255 tRNA (uracil-5-)-methyltransferase Gid YP_318377.1 1934176 D 323098 CDS YP_318378.1 75675957 3675645 1935637..1936737 1 NC_007406.1 serine/threonine protein kinase 1936737 3675645 Nwi_1765 Nitrobacter winogradskyi Nb-255 serine/threonine protein kinase YP_318378.1 1935637 D 323098 CDS YP_318379.1 75675958 3675646 complement(1936744..1937604) 1 NC_007406.1 squalene/phytoene synthase 1937604 3675646 Nwi_1766 Nitrobacter winogradskyi Nb-255 squalene/phytoene synthase YP_318379.1 1936744 R 323098 CDS YP_318380.1 75675959 3675647 complement(1937751..1938137) 1 NC_007406.1 hypothetical protein 1938137 3675647 Nwi_1767 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318380.1 1937751 R 323098 CDS YP_318381.1 75675960 3675648 complement(1938134..1939192) 1 NC_007406.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1939192 secF 3675648 secF Nitrobacter winogradskyi Nb-255 preprotein translocase subunit SecF YP_318381.1 1938134 R 323098 CDS YP_318382.1 75675961 3675649 complement(1939209..1940807) 1 NC_007406.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1940807 secD 3675649 secD Nitrobacter winogradskyi Nb-255 preprotein translocase subunit SecD YP_318382.1 1939209 R 323098 CDS YP_318383.1 75675962 3675650 complement(1940841..1941242) 1 NC_007406.1 preprotein translocase subunit YajC 1941242 3675650 Nwi_1770 Nitrobacter winogradskyi Nb-255 preprotein translocase subunit YajC YP_318383.1 1940841 R 323098 CDS YP_318384.1 75675963 3675651 1941430..1942404 1 NC_007406.1 hypothetical protein 1942404 3675651 Nwi_1771 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318384.1 1941430 D 323098 CDS YP_318385.1 75675964 3675652 complement(1942544..1943905) 1 NC_007406.1 peptidase M23B 1943905 3675652 Nwi_1772 Nitrobacter winogradskyi Nb-255 peptidase M23B YP_318385.1 1942544 R 323098 CDS YP_318386.1 75675965 3675653 complement(1944054..1944707) 1 NC_007406.1 protein-L-isoaspartate(D-aspartate) O-methyltransferase 1944707 3675653 Nwi_1773 Nitrobacter winogradskyi Nb-255 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_318386.1 1944054 R 323098 CDS YP_318387.1 75675966 3675654 1944968..1945348 1 NC_007406.1 response regulator receiver 1945348 3675654 Nwi_1774 Nitrobacter winogradskyi Nb-255 response regulator receiver YP_318387.1 1944968 D 323098 CDS YP_318388.1 75675967 3675655 complement(1945414..1946181) 1 NC_007406.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 1946181 surE 3675655 surE Nitrobacter winogradskyi Nb-255 stationary phase survival protein SurE YP_318388.1 1945414 R 323098 CDS YP_318389.1 75675968 3675656 complement(1946505..1947998) 1 NC_007406.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 1947998 3675656 Nwi_1776 Nitrobacter winogradskyi Nb-255 seryl-tRNA synthetase YP_318389.1 1946505 R 323098 CDS YP_318390.1 75675969 3675657 complement(1948106..1948915) 1 NC_007406.1 sec-independent periplasmic protein translocase 1948915 3675657 Nwi_1777 Nitrobacter winogradskyi Nb-255 sec-independent periplasmic protein translocase YP_318390.1 1948106 R 323098 CDS YP_318391.1 75675970 3676814 complement(1948912..1949454) 1 NC_007406.1 twin-arginine translocation protein TatB 1949454 3676814 Nwi_1778 Nitrobacter winogradskyi Nb-255 twin-arginine translocation protein TatB YP_318391.1 1948912 R 323098 CDS YP_318392.1 75675971 3676815 complement(1949634..1949870) 1 NC_007406.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; twin-arginine translocation protein TatA 1949870 tatA 3676815 tatA Nitrobacter winogradskyi Nb-255 twin-arginine translocation protein TatA YP_318392.1 1949634 R 323098 CDS YP_318393.1 75675972 3676816 complement(1950129..1950791) 1 NC_007406.1 protein-L-isoaspartate(D-aspartate) O-methyltransferase 1950791 3676816 Nwi_1780 Nitrobacter winogradskyi Nb-255 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_318393.1 1950129 R 323098 CDS YP_318394.1 75675973 3676818 1951672..1951917 1 NC_007406.1 hypothetical protein 1951917 3676818 Nwi_1781 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318394.1 1951672 D 323098 CDS YP_318395.1 75675974 3676819 1952076..1952309 1 NC_007406.1 hypothetical protein 1952309 3676819 Nwi_1782 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318395.1 1952076 D 323098 CDS YP_318396.1 75675975 3676820 complement(1952684..1952860) 1 NC_007406.1 hypothetical protein 1952860 3676820 Nwi_1783 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318396.1 1952684 R 323098 CDS YP_318397.1 75675976 3676821 complement(1953513..1954871) 1 NC_007406.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 1954871 glmU 3676821 glmU Nitrobacter winogradskyi Nb-255 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_318397.1 1953513 R 323098 CDS YP_318398.1 75675977 3676822 1955016..1956284 1 NC_007406.1 hypothetical protein 1956284 3676822 Nwi_1785 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318398.1 1955016 D 323098 CDS YP_318399.1 75675978 3676823 1956348..1956728 1 NC_007406.1 hypothetical protein 1956728 3676823 Nwi_1786 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318399.1 1956348 D 323098 CDS YP_318400.1 75675979 3676824 complement(1956688..1958286) 1 NC_007406.1 beta (1-6) glucans synthase 1958286 3676824 Nwi_1787 Nitrobacter winogradskyi Nb-255 beta (1-6) glucans synthase YP_318400.1 1956688 R 323098 CDS YP_318401.1 75675980 3676825 1958733..1959305 1 NC_007406.1 hypothetical protein 1959305 3676825 Nwi_1788 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318401.1 1958733 D 323098 CDS YP_318402.1 75675981 3676826 1959484..1962153 1 NC_007406.1 glycosyl transferase 1962153 3676826 Nwi_1789 Nitrobacter winogradskyi Nb-255 glycosyl transferase YP_318402.1 1959484 D 323098 CDS YP_318403.1 75675982 3677208 1962756..1962917 1 NC_007406.1 hypothetical protein 1962917 3677208 Nwi_1790 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318403.1 1962756 D 323098 CDS YP_318404.1 75675983 3676941 complement(1963129..1964274) 1 NC_007406.1 hypothetical protein 1964274 3676941 Nwi_1791 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318404.1 1963129 R 323098 CDS YP_318405.1 75675984 3677047 1964681..1965031 1 NC_007406.1 hypothetical protein 1965031 3677047 Nwi_1792 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318405.1 1964681 D 323098 CDS YP_318406.1 75675985 3677048 1965049..1965546 1 NC_007406.1 hypothetical protein 1965546 3677048 Nwi_1793 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318406.1 1965049 D 323098 CDS YP_318407.1 75675986 3677049 complement(1965864..1966841) 1 NC_007406.1 cysteine synthase 1966841 3677049 Nwi_1794 Nitrobacter winogradskyi Nb-255 cysteine synthase YP_318407.1 1965864 R 323098 CDS YP_318408.1 75675987 3677050 complement(1967318..1968451) 1 NC_007406.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1968451 tgt 3677050 tgt Nitrobacter winogradskyi Nb-255 queuine tRNA-ribosyltransferase YP_318408.1 1967318 R 323098 CDS YP_318409.1 75675988 3677051 complement(1968448..1969530) 1 NC_007406.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1969530 queA 3677051 queA Nitrobacter winogradskyi Nb-255 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_318409.1 1968448 R 323098 CDS YP_318410.1 75675989 3677052 complement(1969868..1970332) 1 NC_007406.1 cyclophilin type peptidyl-prolyl cis-trans isomerase 1970332 3677052 Nwi_1797 Nitrobacter winogradskyi Nb-255 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_318410.1 1969868 R 323098 CDS YP_318411.1 75675990 3677053 complement(1970373..1970933) 1 NC_007406.1 peptidyl-prolyl cis-trans isomerase, cyclophilin type 1970933 3677053 Nwi_1798 Nitrobacter winogradskyi Nb-255 peptidyl-prolyl cis-trans isomerase, cyclophilin type YP_318411.1 1970373 R 323098 CDS YP_318412.1 75675991 3677054 complement(1970966..1971463) 1 NC_007406.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 1971463 coaD 3677054 coaD Nitrobacter winogradskyi Nb-255 phosphopantetheine adenylyltransferase YP_318412.1 1970966 R 323098 CDS YP_318413.1 75675992 3677055 1971993..1972247 1 NC_007406.1 hypothetical protein 1972247 3677055 Nwi_1800 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318413.1 1971993 D 323098 CDS YP_318414.1 75675993 3677056 complement(1972338..1975079) 1 NC_007406.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 1975079 3677056 Nwi_1801 Nitrobacter winogradskyi Nb-255 DNA gyrase subunit A YP_318414.1 1972338 R 323098 CDS YP_318415.1 75675994 3677057 1975229..1975852 1 NC_007406.1 multiple antibiotic resistance (MarC)-like proteins 1975852 3677057 Nwi_1802 Nitrobacter winogradskyi Nb-255 multiple antibiotic resistance (MarC)-like proteins YP_318415.1 1975229 D 323098 CDS YP_318416.1 75675995 3677058 complement(1975993..1976739) 1 NC_007406.1 chromosome segregation and condensation protein ScpB 1976739 3677058 Nwi_1803 Nitrobacter winogradskyi Nb-255 chromosome segregation and condensation protein ScpB YP_318416.1 1975993 R 323098 CDS YP_318417.1 75675996 3677059 complement(1976761..1977597) 1 NC_007406.1 chromosome segregation and condensation protein ScpA 1977597 3677059 Nwi_1804 Nitrobacter winogradskyi Nb-255 chromosome segregation and condensation protein ScpA YP_318417.1 1976761 R 323098 CDS YP_318418.1 75675997 3677060 complement(1977594..1978610) 1 NC_007406.1 glycoside hydrolase 1978610 3677060 Nwi_1805 Nitrobacter winogradskyi Nb-255 glycoside hydrolase YP_318418.1 1977594 R 323098 CDS YP_318419.1 75675998 3677061 complement(1978658..1980070) 1 NC_007406.1 hypothetical protein 1980070 3677061 Nwi_1806 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318419.1 1978658 R 323098 CDS YP_318420.1 75675999 3677062 complement(1980172..1981965) 1 NC_007406.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 1981965 argS 3677062 argS Nitrobacter winogradskyi Nb-255 arginyl-tRNA synthetase YP_318420.1 1980172 R 323098 CDS YP_318421.1 75676000 3677063 complement(1982004..1983206) 1 NC_007406.1 deoxyguanosinetriphosphate triphosphohydrolase 1983206 3677063 Nwi_1808 Nitrobacter winogradskyi Nb-255 deoxyguanosinetriphosphate triphosphohydrolase YP_318421.1 1982004 R 323098 CDS YP_318422.1 75676001 3677064 1983329..1983661 1 NC_007406.1 HesB/YadR/YfhF 1983661 3677064 Nwi_1809 Nitrobacter winogradskyi Nb-255 HesB/YadR/YfhF YP_318422.1 1983329 D 323098 CDS YP_318423.1 75676002 3677065 1983753..1984553 1 NC_007406.1 exodeoxyribonuclease III 1984553 3677065 Nwi_1810 Nitrobacter winogradskyi Nb-255 exodeoxyribonuclease III YP_318423.1 1983753 D 323098 CDS YP_318424.1 75676003 3677066 complement(1984663..1985433) 1 NC_007406.1 Sel1 repeat-containing protein 1985433 3677066 Nwi_1811 Nitrobacter winogradskyi Nb-255 Sel1 repeat-containing protein YP_318424.1 1984663 R 323098 CDS YP_318425.1 75676004 3675854 complement(1985481..1985825) 1 NC_007406.1 hypothetical protein 1985825 3675854 Nwi_1812 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318425.1 1985481 R 323098 CDS YP_318426.1 75676005 3675855 complement(1986043..1987476) 1 NC_007406.1 E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 1987476 3675855 Nwi_1813 Nitrobacter winogradskyi Nb-255 dihydrolipoamide dehydrogenase YP_318426.1 1986043 R 323098 CDS YP_318427.1 75676006 3675856 complement(1987495..1988460) 1 NC_007406.1 OmpA/MotB 1988460 3675856 Nwi_1814 Nitrobacter winogradskyi Nb-255 OmpA/MotB YP_318427.1 1987495 R 323098 CDS YP_318428.1 75676007 3675857 complement(1988489..1988833) 1 NC_007406.1 hypothetical protein 1988833 3675857 Nwi_1815 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318428.1 1988489 R 323098 CDS YP_318429.1 75676008 3675858 complement(1988830..1990188) 1 NC_007406.1 branched-chain alpha-keto acid dehydrogenase subunit E2 1990188 3675858 Nwi_1816 Nitrobacter winogradskyi Nb-255 branched-chain alpha-keto acid dehydrogenase subunit E2 YP_318429.1 1988830 R 323098 CDS YP_318430.1 75676009 3675859 complement(1990201..1991598) 1 NC_007406.1 catalyzes the oxidative decarboxylation of pyruvate with concomitant acetylation of a lipoic acid-containing dihydrolipoamide acetyltransferase within the complex. The E1 component of the pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase(E2) and lipoamide dehydrogenase; pyruvate dehydrogenase subunit beta 1991598 3675859 Nwi_1817 Nitrobacter winogradskyi Nb-255 pyruvate dehydrogenase subunit beta YP_318430.1 1990201 R 323098 CDS YP_318431.1 75676010 3675860 complement(1991626..1992654) 1 NC_007406.1 dehydrogenase, E1 component 1992654 3675860 Nwi_1818 Nitrobacter winogradskyi Nb-255 dehydrogenase, E1 component YP_318431.1 1991626 R 323098 CDS YP_318432.1 75676011 3675861 complement(1992839..1993156) 1 NC_007406.1 septum formation initiator 1993156 3675861 Nwi_1819 Nitrobacter winogradskyi Nb-255 septum formation initiator YP_318432.1 1992839 R 323098 CDS YP_318433.1 75676012 3675862 complement(1993216..1993773) 1 NC_007406.1 NADPH-dependent FMN reductase 1993773 3675862 Nwi_1820 Nitrobacter winogradskyi Nb-255 NADPH-dependent FMN reductase YP_318433.1 1993216 R 323098 CDS YP_318434.1 75676013 3675863 complement(1993835..1994422) 1 NC_007406.1 isoprenylcysteine carboxyl methyltransferase 1994422 3675863 Nwi_1821 Nitrobacter winogradskyi Nb-255 isoprenylcysteine carboxyl methyltransferase YP_318434.1 1993835 R 323098 CDS YP_318435.1 75676014 3675864 complement(1994438..1995694) 1 NC_007406.1 hypothetical protein 1995694 3675864 Nwi_1822 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318435.1 1994438 R 323098 CDS YP_318436.1 75676015 3675865 1995914..1996588 1 NC_007406.1 hypothetical protein 1996588 3675865 Nwi_1823 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318436.1 1995914 D 323098 CDS YP_318437.1 75676016 3675866 1996753..1997727 1 NC_007406.1 PE_PGRS family protein 1997727 3675866 Nwi_1824 Nitrobacter winogradskyi Nb-255 PE_PGRS family protein YP_318437.1 1996753 D 323098 CDS YP_318438.1 75676017 3675868 1999160..1999732 1 NC_007406.1 hypothetical protein 1999732 3675868 Nwi_1826 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318438.1 1999160 D 323098 CDS YP_318439.1 75676018 3675869 complement(1999831..2001111) 1 NC_007406.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 2001111 eno 3675869 eno Nitrobacter winogradskyi Nb-255 phosphopyruvate hydratase YP_318439.1 1999831 R 323098 CDS YP_318440.1 75676019 3675870 2001574..2002050 1 NC_007406.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 2002050 3675870 Nwi_1828 Nitrobacter winogradskyi Nb-255 7-cyano-7-deazaguanine reductase YP_318440.1 2001574 D 323098 CDS YP_318441.1 75676020 3675871 complement(2002083..2002799) 1 NC_007406.1 hypothetical protein 2002799 3675871 Nwi_1829 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318441.1 2002083 R 323098 CDS YP_318442.1 75676021 3675872 complement(2002899..2004095) 1 NC_007406.1 major facilitator transporter 2004095 3675872 Nwi_1830 Nitrobacter winogradskyi Nb-255 major facilitator transporter YP_318442.1 2002899 R 323098 CDS YP_318443.1 75676022 3674756 complement(2004092..2004955) 1 NC_007406.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 2004955 3674756 Nwi_1831 Nitrobacter winogradskyi Nb-255 2-dehydro-3-deoxyphosphooctonate aldolase YP_318443.1 2004092 R 323098 CDS YP_318444.1 75676023 3674757 2005107..2005463 1 NC_007406.1 hypothetical protein 2005463 3674757 Nwi_1832 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318444.1 2005107 D 323098 CDS YP_318445.1 75676024 3674758 complement(2005468..2007099) 1 NC_007406.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 2007099 pyrG 3674758 pyrG Nitrobacter winogradskyi Nb-255 CTP synthetase YP_318445.1 2005468 R 323098 CDS YP_318446.2 162139843 3674759 complement(2007266..2007640) 1 NC_007406.1 preprotein translocase subunit SecG 2007640 secG 3674759 secG Nitrobacter winogradskyi Nb-255 preprotein translocase subunit SecG YP_318446.2 2007266 R 323098 CDS YP_318447.1 75676026 3674760 complement(2008195..2008947) 1 NC_007406.1 triosephosphate isomerase 2008947 3674760 Nwi_1835 Nitrobacter winogradskyi Nb-255 triosephosphate isomerase YP_318447.1 2008195 R 323098 CDS YP_318448.1 75676027 3674761 2009269..2011179 1 NC_007406.1 PpiC-type peptidyl-prolyl cis-trans isomerase 2011179 3674761 Nwi_1836 Nitrobacter winogradskyi Nb-255 PpiC-type peptidyl-prolyl cis-trans isomerase YP_318448.1 2009269 D 323098 CDS YP_318449.1 75676028 3674762 2011216..2012229 1 NC_007406.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2012229 trpD 3674762 trpD Nitrobacter winogradskyi Nb-255 anthranilate phosphoribosyltransferase YP_318449.1 2011216 D 323098 CDS YP_318450.1 75676029 3674763 2012240..2013034 1 NC_007406.1 involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; indole-3-glycerol phosphate synthase 2013034 trpC 3674763 trpC Nitrobacter winogradskyi Nb-255 indole-3-glycerol phosphate synthase YP_318450.1 2012240 D 323098 CDS YP_318451.1 75676030 3674764 2013188..2013697 1 NC_007406.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 2013697 moaC 3674764 moaC Nitrobacter winogradskyi Nb-255 molybdenum cofactor biosynthesis protein MoaC YP_318451.1 2013188 D 323098 CDS YP_318452.1 75676031 3674765 2014016..2015230 1 NC_007406.1 molybdopterin biosynthesis protein MoeA 2015230 3674765 Nwi_1840 Nitrobacter winogradskyi Nb-255 molybdopterin biosynthesis protein MoeA YP_318452.1 2014016 D 323098 CDS YP_318453.1 75676032 3674766 2015400..2016101 1 NC_007406.1 Represses a number of genes involved in the response to DNA damage; LexA repressor 2016101 3674766 Nwi_1841 Nitrobacter winogradskyi Nb-255 LexA repressor YP_318453.1 2015400 D 323098 CDS YP_318454.1 75676033 3674767 complement(2016794..2019130) 1 NC_007406.1 ComEC/Rec2-like protein 2019130 3674767 Nwi_1842 Nitrobacter winogradskyi Nb-255 ComEC/Rec2-like protein YP_318454.1 2016794 R 323098 CDS YP_318455.1 75676034 3674814 complement(2019217..2020896) 1 NC_007406.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 2020896 3674814 Nwi_1843 Nitrobacter winogradskyi Nb-255 glutaminyl-tRNA synthetase YP_318455.1 2019217 R 323098 CDS YP_318456.1 75676035 3674815 2021064..2022554 1 NC_007406.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 2022554 gltX 3674815 gltX Nitrobacter winogradskyi Nb-255 glutamyl-tRNA synthetase YP_318456.1 2021064 D 323098 CDS YP_318457.1 75676036 3674816 2022697..2023998 1 NC_007406.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 2023998 gltA 3674816 gltA Nitrobacter winogradskyi Nb-255 type II citrate synthase YP_318457.1 2022697 D 323098 CDS YP_318458.1 75676037 3674817 complement(2024022..2025212) 1 NC_007406.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 2025212 lpxB 3674817 lpxB Nitrobacter winogradskyi Nb-255 lipid-A-disaccharide synthase YP_318458.1 2024022 R 323098 CDS YP_318459.1 75676038 3674818 complement(2025212..2026078) 1 NC_007406.1 hypothetical protein 2026078 3674818 Nwi_1847 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318459.1 2025212 R 323098 CDS YP_318460.1 75676039 3674819 complement(2026089..2026895) 1 NC_007406.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 2026895 3674819 Nwi_1848 Nitrobacter winogradskyi Nb-255 UDP-N-acetylglucosamine acyltransferase YP_318460.1 2026089 R 323098 CDS YP_318461.1 75676040 3674820 complement(2026895..2027350) 1 NC_007406.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 2027350 fabZ 3674820 fabZ Nitrobacter winogradskyi Nb-255 (3R)-hydroxymyristoyl-ACP dehydratase YP_318461.1 2026895 R 323098 CDS YP_318462.1 75676041 3674821 complement(2027370..2028458) 1 NC_007406.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 2028458 lpxD 3674821 lpxD Nitrobacter winogradskyi Nb-255 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_318462.1 2027370 R 323098 CDS YP_318463.1 75676042 3674500 complement(2028491..2031022) 1 NC_007406.1 Outer membrane protein 2031022 3674500 Nwi_1851 Nitrobacter winogradskyi Nb-255 Outer membrane protein YP_318463.1 2028491 R 323098 CDS YP_318464.1 75676043 3674501 complement(2031304..2032455) 1 NC_007406.1 peptidase M50 membrane-associated zinc metallopeptidase 2032455 3674501 Nwi_1852 Nitrobacter winogradskyi Nb-255 peptidase M50 membrane-associated zinc metallopeptidase YP_318464.1 2031304 R 323098 CDS YP_318465.1 75676044 3674502 complement(2032580..2033803) 1 NC_007406.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 2033803 3674502 Nwi_1853 Nitrobacter winogradskyi Nb-255 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_318465.1 2032580 R 323098 CDS YP_318466.1 75676045 3674503 complement(2033807..2034649) 1 NC_007406.1 phosphatidate cytidylyltransferase 2034649 3674503 Nwi_1854 Nitrobacter winogradskyi Nb-255 phosphatidate cytidylyltransferase YP_318466.1 2033807 R 323098 CDS YP_318467.1 75676046 3674504 complement(2034808..2035566) 1 NC_007406.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 2035566 3674504 Nwi_1855 Nitrobacter winogradskyi Nb-255 undecaprenyl pyrophosphate synthase YP_318467.1 2034808 R 323098 CDS YP_318468.1 75676047 3674505 complement(2035585..2036148) 1 NC_007406.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 2036148 frr 3674505 frr Nitrobacter winogradskyi Nb-255 ribosome recycling factor YP_318468.1 2035585 R 323098 CDS YP_318469.1 75676048 3674506 complement(2036200..2036916) 1 NC_007406.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 2036916 pyrH 3674506 pyrH Nitrobacter winogradskyi Nb-255 uridylate kinase YP_318469.1 2036200 R 323098 CDS YP_318470.1 75676049 3674507 complement(2036966..2037889) 1 NC_007406.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 2037889 tsf 3674507 tsf Nitrobacter winogradskyi Nb-255 elongation factor Ts YP_318470.1 2036966 R 323098 CDS YP_318471.1 75676050 3674508 complement(2038015..2039013) 1 NC_007406.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 2039013 rpsB 3674508 rpsB Nitrobacter winogradskyi Nb-255 30S ribosomal protein S2 YP_318471.1 2038015 R 323098 CDS YP_318472.1 75676051 3674509 complement(2039205..2042711) 1 NC_007406.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 2042711 dnaE 3674509 dnaE Nitrobacter winogradskyi Nb-255 DNA polymerase III subunit alpha YP_318472.1 2039205 R 323098 CDS YP_318473.1 75676052 3674510 complement(2043264..2043548) 1 NC_007406.1 hypothetical protein 2043548 3674510 Nwi_1861 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318473.1 2043264 R 323098 CDS YP_318474.1 75676053 3674511 complement(2043612..2044334) 1 NC_007406.1 orotidine 5'-phosphate decarboxylase 2044334 3674511 Nwi_1862 Nitrobacter winogradskyi Nb-255 orotidine 5'-phosphate decarboxylase YP_318474.1 2043612 R 323098 CDS YP_318475.1 75676054 3674512 complement(2044863..2045561) 1 NC_007406.1 ABC transporter ATPase 2045561 3674512 Nwi_1863 Nitrobacter winogradskyi Nb-255 ABC transporter ATPase YP_318475.1 2044863 R 323098 CDS YP_318476.1 75676055 3674513 complement(2045570..2046850) 1 NC_007406.1 LolC/E family lipoprotein releasing system, transmembrane protein 2046850 3674513 Nwi_1864 Nitrobacter winogradskyi Nb-255 LolC/E family lipoprotein releasing system, transmembrane protein YP_318476.1 2045570 R 323098 CDS YP_318477.1 75676056 3674514 complement(2046923..2048242) 1 NC_007406.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 2048242 3674514 Nwi_1865 Nitrobacter winogradskyi Nb-255 prolyl-tRNA synthetase YP_318477.1 2046923 R 323098 CDS YP_318478.1 75676057 3674515 complement(2048647..2049177) 1 NC_007406.1 nuclear export factor GLE1 2049177 3674515 Nwi_1866 Nitrobacter winogradskyi Nb-255 nuclear export factor GLE1 YP_318478.1 2048647 R 323098 CDS YP_318479.1 75676058 3674516 complement(2049174..2049710) 1 NC_007406.1 hypothetical protein 2049710 3674516 Nwi_1867 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318479.1 2049174 R 323098 CDS YP_318480.1 75676059 3674517 complement(2049739..2051943) 1 NC_007406.1 TonB-dependent receptor 2051943 3674517 Nwi_1868 Nitrobacter winogradskyi Nb-255 TonB-dependent receptor YP_318480.1 2049739 R 323098 CDS YP_318481.1 75676060 3674518 complement(2052040..2052405) 1 NC_007406.1 hypothetical protein 2052405 3674518 Nwi_1869 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318481.1 2052040 R 323098 CDS YP_318482.1 75676061 3675326 complement(2052624..2052899) 1 NC_007406.1 hypothetical protein 2052899 3675326 Nwi_1870 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318482.1 2052624 R 323098 CDS YP_318483.1 75676062 3675327 complement(2052899..2053303) 1 NC_007406.1 glyoxalase/bleomycin resistance protein/dioxygenase 2053303 3675327 Nwi_1871 Nitrobacter winogradskyi Nb-255 glyoxalase/bleomycin resistance protein/dioxygenase YP_318483.1 2052899 R 323098 CDS YP_318484.1 75676063 3675328 complement(2053470..2055143) 1 NC_007406.1 metallo-beta-lactamase superfamily hydrolase 2055143 3675328 Nwi_1872 Nitrobacter winogradskyi Nb-255 metallo-beta-lactamase superfamily hydrolase YP_318484.1 2053470 R 323098 CDS YP_318485.1 75676064 3675329 complement(2055140..2055952) 1 NC_007406.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 2055952 3675329 Nwi_1873 Nitrobacter winogradskyi Nb-255 biotin--protein ligase YP_318485.1 2055140 R 323098 CDS YP_318486.1 75676065 3675330 complement(2055966..2057402) 1 NC_007406.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 2057402 3675330 Nwi_1874 Nitrobacter winogradskyi Nb-255 NADH dehydrogenase subunit N YP_318486.1 2055966 R 323098 CDS YP_318487.1 75676066 3675331 complement(2057425..2058933) 1 NC_007406.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 2058933 3675331 Nwi_1875 Nitrobacter winogradskyi Nb-255 NADH dehydrogenase subunit M YP_318487.1 2057425 R 323098 CDS YP_318488.1 75676067 3675332 complement(2058936..2061002) 1 NC_007406.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 2061002 3675332 Nwi_1876 Nitrobacter winogradskyi Nb-255 NADH dehydrogenase subunit L YP_318488.1 2058936 R 323098 CDS YP_318489.1 75676068 3675333 complement(2061086..2061394) 1 NC_007406.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 2061394 3675333 Nwi_1877 Nitrobacter winogradskyi Nb-255 NADH dehydrogenase subunit K YP_318489.1 2061086 R 323098 CDS YP_318490.1 75676069 3675334 complement(2061391..2062029) 1 NC_007406.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 2062029 3675334 Nwi_1878 Nitrobacter winogradskyi Nb-255 NADH dehydrogenase subunit J YP_318490.1 2061391 R 323098 CDS YP_318491.1 75676070 3675335 complement(2062039..2062527) 1 NC_007406.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 2062527 3675335 Nwi_1879 Nitrobacter winogradskyi Nb-255 NADH dehydrogenase subunit I YP_318491.1 2062039 R 323098 CDS YP_318492.1 75676071 3675336 complement(2062543..2063613) 1 NC_007406.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 2063613 3675336 Nwi_1880 Nitrobacter winogradskyi Nb-255 NADH dehydrogenase subunit H YP_318492.1 2062543 R 323098 CDS YP_318493.1 75676072 3675337 complement(2063619..2065694) 1 NC_007406.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 2065694 3675337 Nwi_1881 Nitrobacter winogradskyi Nb-255 NADH dehydrogenase subunit G YP_318493.1 2063619 R 323098 CDS YP_318494.1 75676073 3675338 complement(2065699..2067024) 1 NC_007406.1 part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 2067024 3675338 Nwi_1882 Nitrobacter winogradskyi Nb-255 NADH dehydrogenase I subunit F YP_318494.1 2065699 R 323098 CDS YP_318495.1 75676074 3675339 complement(2067024..2067776) 1 NC_007406.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 2067776 3675339 Nwi_1883 Nitrobacter winogradskyi Nb-255 NADH dehydrogenase subunit E YP_318495.1 2067024 R 323098 CDS YP_318496.1 75676075 3675340 complement(2067791..2068756) 1 NC_007406.1 methyltransferase FkbM 2068756 3675340 Nwi_1884 Nitrobacter winogradskyi Nb-255 methyltransferase FkbM YP_318496.1 2067791 R 323098 CDS YP_318497.1 75676076 3675341 complement(2068753..2069961) 1 NC_007406.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 2069961 3675341 Nwi_1885 Nitrobacter winogradskyi Nb-255 NADH dehydrogenase subunit D YP_318497.1 2068753 R 323098 CDS YP_318498.1 75676077 3675342 complement(2069961..2070581) 1 NC_007406.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit C 2070581 3675342 Nwi_1886 Nitrobacter winogradskyi Nb-255 NADH dehydrogenase subunit C YP_318498.1 2069961 R 323098 CDS YP_318499.1 75676078 3675343 complement(2070593..2071216) 1 NC_007406.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 2071216 3675343 Nwi_1887 Nitrobacter winogradskyi Nb-255 NADH dehydrogenase subunit B YP_318499.1 2070593 R 323098 CDS YP_318500.1 75676079 3675344 complement(2071186..2071551) 1 NC_007406.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 2071551 3675344 Nwi_1888 Nitrobacter winogradskyi Nb-255 NADH dehydrogenase subunit A YP_318500.1 2071186 R 323098 CDS YP_318501.1 75676080 3675345 2071741..2072064 1 NC_007406.1 hypothetical protein 2072064 3675345 Nwi_1889 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318501.1 2071741 D 323098 CDS YP_318502.1 75676081 3675438 complement(2072674..2072871) 1 NC_007406.1 hypothetical protein 2072871 3675438 Nwi_1890 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318502.1 2072674 R 323098 CDS YP_318503.1 75676082 3675439 complement(2072872..2073111) 1 NC_007406.1 hypothetical protein 2073111 3675439 Nwi_1891 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318503.1 2072872 R 323098 CDS YP_318504.1 75676083 3675441 2073631..2073930 1 NC_007406.1 histone-like DNA-binding protein 2073930 3675441 Nwi_1892 Nitrobacter winogradskyi Nb-255 histone-like DNA-binding protein YP_318504.1 2073631 D 323098 CDS YP_318505.1 75676084 3675442 2074083..2075336 1 NC_007406.1 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 2075336 3675442 Nwi_1893 Nitrobacter winogradskyi Nb-255 peptidase T YP_318505.1 2074083 D 323098 CDS YP_318506.1 75676085 3675443 complement(2075524..2076330) 1 NC_007406.1 methyltransferase FkbM 2076330 3675443 Nwi_1894 Nitrobacter winogradskyi Nb-255 methyltransferase FkbM YP_318506.1 2075524 R 323098 CDS YP_318507.1 75676086 3675444 2076388..2076699 1 NC_007406.1 hypothetical protein 2076699 3675444 Nwi_1895 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318507.1 2076388 D 323098 CDS YP_318508.1 75676087 3675445 complement(2076751..2077608) 1 NC_007406.1 UbiE/COQ5 methyltransferase 2077608 3675445 Nwi_1896 Nitrobacter winogradskyi Nb-255 UbiE/COQ5 methyltransferase YP_318508.1 2076751 R 323098 CDS YP_318509.1 75676088 3675447 complement(2078532..2080958) 1 NC_007406.1 peptidase S16, ATP-dependent protease La 2080958 3675447 Nwi_1897 Nitrobacter winogradskyi Nb-255 peptidase S16, ATP-dependent protease La YP_318509.1 2078532 R 323098 CDS YP_318510.1 75676089 3675448 complement(2081266..2082540) 1 NC_007406.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 2082540 clpX 3675448 clpX Nitrobacter winogradskyi Nb-255 ATP-dependent protease ATP-binding subunit ClpX YP_318510.1 2081266 R 323098 CDS YP_318511.1 75676090 3675449 complement(2082966..2083604) 1 NC_007406.1 peptidase S14, ClpP 2083604 3675449 Nwi_1899 Nitrobacter winogradskyi Nb-255 peptidase S14, ClpP YP_318511.1 2082966 R 323098 CDS YP_318512.1 75676091 3675450 complement(2084024..2085385) 1 NC_007406.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 2085385 tig 3675450 tig Nitrobacter winogradskyi Nb-255 trigger factor YP_318512.1 2084024 R 323098 CDS YP_318513.1 75676092 3675452 2085946..2087223 1 NC_007406.1 multicopper oxidase 2087223 3675452 Nwi_1901 Nitrobacter winogradskyi Nb-255 multicopper oxidase YP_318513.1 2085946 D 323098 CDS YP_318514.1 75676093 3675885 complement(2087241..2088740) 1 NC_007406.1 hypothetical protein 2088740 3675885 Nwi_1902 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318514.1 2087241 R 323098 CDS YP_318515.1 75676094 3675886 2089086..2089424 1 NC_007406.1 nitrogen regulatory protein P-II 2089424 3675886 Nwi_1903 Nitrobacter winogradskyi Nb-255 nitrogen regulatory protein P-II YP_318515.1 2089086 D 323098 CDS YP_318516.1 75676095 3675887 2089515..2090924 1 NC_007406.1 glutamine synthetase type I 2090924 3675887 Nwi_1904 Nitrobacter winogradskyi Nb-255 glutamine synthetase type I YP_318516.1 2089515 D 323098 CDS YP_318517.1 75676096 3675888 2091076..2092215 1 NC_007406.1 hypothetical protein 2092215 3675888 Nwi_1905 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318517.1 2091076 D 323098 CDS YP_318518.1 75676097 3675889 complement(2092212..2092514) 1 NC_007406.1 antibiotic biosynthesis monooxygenase 2092514 3675889 Nwi_1906 Nitrobacter winogradskyi Nb-255 antibiotic biosynthesis monooxygenase YP_318518.1 2092212 R 323098 CDS YP_318519.1 75676098 3675890 complement(2092830..2093342) 1 NC_007406.1 MarR family transcriptional regulator 2093342 3675890 Nwi_1907 Nitrobacter winogradskyi Nb-255 MarR family transcriptional regulator YP_318519.1 2092830 R 323098 CDS YP_318520.1 75676099 3675891 complement(2093752..2094228) 1 NC_007406.1 hypothetical protein 2094228 3675891 Nwi_1908 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318520.1 2093752 R 323098 CDS YP_318521.1 75676100 3675892 2094384..2095442 1 NC_007406.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 2095442 3675892 Nwi_1909 Nitrobacter winogradskyi Nb-255 delta-aminolevulinic acid dehydratase YP_318521.1 2094384 D 323098 CDS YP_318522.1 75676101 3675893 2095589..2096128 1 NC_007406.1 hypothetical protein 2096128 3675893 Nwi_1910 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318522.1 2095589 D 323098 CDS YP_318523.1 75676102 3675894 2096210..2096983 1 NC_007406.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 2096983 3675894 Nwi_1911 Nitrobacter winogradskyi Nb-255 arginyl-tRNA-protein transferase YP_318523.1 2096210 D 323098 CDS YP_318524.1 75676103 3675895 complement(2097014..2098396) 1 NC_007406.1 manganese transport protein MntH 2098396 3675895 Nwi_1912 Nitrobacter winogradskyi Nb-255 manganese transport protein MntH YP_318524.1 2097014 R 323098 CDS YP_318525.1 75676104 3675896 complement(2098570..2098968) 1 NC_007406.1 arsenate reductase 2098968 3675896 Nwi_1913 Nitrobacter winogradskyi Nb-255 arsenate reductase YP_318525.1 2098570 R 323098 CDS YP_318526.1 75676105 3675897 complement(2099085..2101334) 1 NC_007406.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 2101334 3675897 Nwi_1914 Nitrobacter winogradskyi Nb-255 DNA topoisomerase IV subunit A YP_318526.1 2099085 R 323098 CDS YP_318527.2 162139842 3675898 complement(2101385..2102173) 1 NC_007406.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 2102173 recO 3675898 recO Nitrobacter winogradskyi Nb-255 DNA repair protein RecO YP_318527.2 2101385 R 323098 CDS YP_318528.1 75676107 3675899 complement(2102247..2102618) 1 NC_007406.1 hypothetical protein 2102618 3675899 Nwi_1916 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318528.1 2102247 R 323098 CDS YP_318529.1 75676108 3675900 complement(2102633..2103544) 1 NC_007406.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 2103544 era 3675900 era Nitrobacter winogradskyi Nb-255 GTP-binding protein Era YP_318529.1 2102633 R 323098 CDS YP_318530.1 75676109 3675901 complement(2103541..2104341) 1 NC_007406.1 ribonuclease III 2104341 3675901 Nwi_1918 Nitrobacter winogradskyi Nb-255 ribonuclease III YP_318530.1 2103541 R 323098 CDS YP_318531.1 75676110 3675902 complement(2104338..2105096) 1 NC_007406.1 peptidase S26A, signal peptidase I 2105096 3675902 Nwi_1919 Nitrobacter winogradskyi Nb-255 peptidase S26A, signal peptidase I YP_318531.1 2104338 R 323098 CDS YP_318532.1 75676111 3675903 complement(2105361..2105780) 1 NC_007406.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 2105780 acpS 3675903 acpS Nitrobacter winogradskyi Nb-255 4'-phosphopantetheinyl transferase YP_318532.1 2105361 R 323098 CDS YP_318533.1 75676112 3676776 complement(2105777..2106589) 1 NC_007406.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 2106589 3676776 Nwi_1921 Nitrobacter winogradskyi Nb-255 pyridoxine 5'-phosphate synthase YP_318533.1 2105777 R 323098 CDS YP_318534.1 75676113 3676777 complement(2106787..2109111) 1 NC_007406.1 RelA/SpoT protein 2109111 3676777 Nwi_1922 Nitrobacter winogradskyi Nb-255 RelA/SpoT protein YP_318534.1 2106787 R 323098 CDS YP_318535.1 75676114 3676778 complement(2109512..2109904) 1 NC_007406.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 2109904 3676778 Nwi_1923 Nitrobacter winogradskyi Nb-255 DNA-directed RNA polymerase subunit omega YP_318535.1 2109512 R 323098 CDS YP_318536.1 75676115 3676779 2110249..2110866 1 NC_007406.1 hypothetical protein 2110866 3676779 Nwi_1924 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318536.1 2110249 D 323098 CDS YP_318537.1 75676116 3676780 2110844..2111521 1 NC_007406.1 uracil-DNA glycosylase 2111521 3676780 Nwi_1925 Nitrobacter winogradskyi Nb-255 uracil-DNA glycosylase YP_318537.1 2110844 D 323098 CDS YP_318538.1 75676117 3676781 complement(2111614..2111883) 1 NC_007406.1 hypothetical protein 2111883 3676781 Nwi_1926 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318538.1 2111614 R 323098 CDS YP_318539.1 75676118 3676782 complement(2111974..2112447) 1 NC_007406.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 2112447 smpB 3676782 smpB Nitrobacter winogradskyi Nb-255 SsrA-binding protein YP_318539.1 2111974 R 323098 CDS YP_318540.1 75676119 3676783 complement(2112512..2112931) 1 NC_007406.1 homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 2112931 mscL 3676783 mscL Nitrobacter winogradskyi Nb-255 large-conductance mechanosensitive channel YP_318540.1 2112512 R 323098 CDS YP_318541.1 75676120 3676784 complement(2113111..2114001) 1 NC_007406.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 2114001 dapA 3676784 dapA Nitrobacter winogradskyi Nb-255 dihydrodipicolinate synthase YP_318541.1 2113111 R 323098 CDS YP_318542.1 75676121 3676785 2114362..2116569 1 NC_007406.1 lytic transglycosylase 2116569 3676785 Nwi_1930 Nitrobacter winogradskyi Nb-255 lytic transglycosylase YP_318542.1 2114362 D 323098 CDS YP_318543.1 75676122 3676786 2116944..2117318 1 NC_007406.1 transposase IS3/IS911 2117318 3676786 Nwi_1931 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_318543.1 2116944 D 323098 CDS YP_318544.1 75676123 3676787 2117315..2118295 1 NC_007406.1 Fis family transcriptional regulator 2118295 3676787 Nwi_1932 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_318544.1 2117315 D 323098 CDS YP_318545.1 75676124 3676788 complement(2118832..2120400) 1 NC_007406.1 porin 2120400 3676788 Nwi_1933 Nitrobacter winogradskyi Nb-255 porin YP_318545.1 2118832 R 323098 CDS YP_318546.1 75676125 3676790 complement(2122884..2123414) 1 NC_007406.1 transposase, IS4 2123414 3676790 Nwi_1934 Nitrobacter winogradskyi Nb-255 transposase, IS4 YP_318546.1 2122884 R 323098 CDS YP_318547.1 75676126 3676791 complement(2123744..2124034) 1 NC_007406.1 hypothetical protein 2124034 3676791 Nwi_1935 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318547.1 2123744 R 323098 CDS YP_318548.1 75676127 3676792 complement(2124041..2125075) 1 NC_007406.1 hypothetical protein 2125075 3676792 Nwi_1936 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318548.1 2124041 R 323098 CDS YP_318549.1 75676128 3676793 complement(2125072..2125722) 1 NC_007406.1 hypothetical protein 2125722 3676793 Nwi_1937 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318549.1 2125072 R 323098 CDS YP_318550.1 75676129 3674782 complement(2125727..2126677) 1 NC_007406.1 CRISPR-associated Csh2 family protein 2126677 3674782 Nwi_1938 Nitrobacter winogradskyi Nb-255 CRISPR-associated Csh2 family protein YP_318550.1 2125727 R 323098 CDS YP_318551.1 75676130 3674783 complement(2126677..2128458) 1 NC_007406.1 CRISPR-associated Csd1 family protein 2128458 3674783 Nwi_1939 Nitrobacter winogradskyi Nb-255 CRISPR-associated Csd1 family protein YP_318551.1 2126677 R 323098 CDS YP_318552.1 75676131 3674784 complement(2128455..2129147) 1 NC_007406.1 CRISPR-associated Csd1 family protein 2129147 3674784 Nwi_1940 Nitrobacter winogradskyi Nb-255 CRISPR-associated Csd1 family protein YP_318552.1 2128455 R 323098 CDS YP_318553.1 75676132 3674785 complement(2129211..2131445) 1 NC_007406.1 CRISPR-associated helicase Cas3 2131445 3674785 Nwi_1941 Nitrobacter winogradskyi Nb-255 CRISPR-associated helicase Cas3 YP_318553.1 2129211 R 323098 CDS YP_318554.1 75676133 3674786 complement(2131536..2131946) 1 NC_007406.1 bacteriophage-like protein 2131946 3674786 Nwi_1942 Nitrobacter winogradskyi Nb-255 bacteriophage-like protein YP_318554.1 2131536 R 323098 CDS YP_318555.1 75676134 3674787 complement(2131949..2133280) 1 NC_007406.1 resolvase 2133280 3674787 Nwi_1943 Nitrobacter winogradskyi Nb-255 resolvase YP_318555.1 2131949 R 323098 CDS YP_318556.1 75676135 3674788 2133392..2133766 1 NC_007406.1 transposase IS3/IS911 2133766 3674788 Nwi_1944 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_318556.1 2133392 D 323098 CDS YP_318557.1 75676136 3674789 2133763..2134743 1 NC_007406.1 Fis family transcriptional regulator 2134743 3674789 Nwi_1945 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_318557.1 2133763 D 323098 CDS YP_318558.1 75676137 3674790 2134850..2135137 1 NC_007406.1 transmembrane protein 2135137 3674790 Nwi_1946 Nitrobacter winogradskyi Nb-255 transmembrane protein YP_318558.1 2134850 D 323098 CDS YP_318559.1 75676138 3674791 2135469..2137856 1 NC_007406.1 phosphoketolase 2137856 3674791 Nwi_1947 Nitrobacter winogradskyi Nb-255 phosphoketolase YP_318559.1 2135469 D 323098 CDS YP_318560.1 75676139 3674792 complement(2137886..2139655) 1 NC_007406.1 acetate kinase 2139655 3674792 Nwi_1948 Nitrobacter winogradskyi Nb-255 acetate kinase YP_318560.1 2137886 R 323098 CDS YP_318561.1 75676140 3674769 2140202..2142199 1 NC_007406.1 heavy metal translocating P-type ATPase 2142199 3674769 Nwi_1949 Nitrobacter winogradskyi Nb-255 heavy metal translocating P-type ATPase YP_318561.1 2140202 D 323098 CDS YP_318562.1 75676141 3674394 complement(2142589..2142990) 1 NC_007406.1 phage-like protein 2142990 3674394 Nwi_1950 Nitrobacter winogradskyi Nb-255 phage-like protein YP_318562.1 2142589 R 323098 CDS YP_318563.1 75676142 3676301 complement(2142987..2144324) 1 NC_007406.1 resolvase 2144324 3676301 Nwi_1951 Nitrobacter winogradskyi Nb-255 resolvase YP_318563.1 2142987 R 323098 CDS YP_318564.1 75676143 3676302 complement(2144321..2144830) 1 NC_007406.1 hypothetical protein 2144830 3676302 Nwi_1952 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318564.1 2144321 R 323098 CDS YP_318565.1 75676144 3676303 complement(2145257..2145748) 1 NC_007406.1 DNA modification methylase 2145748 3676303 Nwi_1953 Nitrobacter winogradskyi Nb-255 DNA modification methylase YP_318565.1 2145257 R 323098 CDS YP_318566.1 75676145 3676304 complement(2145846..2146877) 1 NC_007406.1 hypothetical protein 2146877 3676304 Nwi_1954 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318566.1 2145846 R 323098 CDS YP_318567.1 75676146 3676305 complement(2146890..2148032) 1 NC_007406.1 hypothetical protein 2148032 3676305 Nwi_1955 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318567.1 2146890 R 323098 CDS YP_318568.1 75676147 3674677 complement(2148101..2148619) 1 NC_007406.1 hypothetical protein 2148619 3674677 Nwi_1956 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318568.1 2148101 R 323098 CDS YP_318569.1 75676148 3676737 complement(2148635..2149867) 1 NC_007406.1 XRE family transcriptional regulator 2149867 3676737 Nwi_1957 Nitrobacter winogradskyi Nb-255 XRE family transcriptional regulator YP_318569.1 2148635 R 323098 CDS YP_318570.1 75676149 3674222 2150052..2151239 1 NC_007406.1 hypothetical protein 2151239 3674222 Nwi_1958 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318570.1 2150052 D 323098 CDS YP_318571.1 75676150 3674223 2151223..2152161 1 NC_007406.1 hypothetical protein 2152161 3674223 Nwi_1959 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318571.1 2151223 D 323098 CDS YP_318572.1 75676151 3674224 2152329..2152538 1 NC_007406.1 hypothetical protein 2152538 3674224 Nwi_1960 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318572.1 2152329 D 323098 CDS YP_318573.1 75676152 3674225 2152549..2153037 1 NC_007406.1 hypothetical protein 2153037 3674225 Nwi_1961 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318573.1 2152549 D 323098 CDS YP_318574.1 75676153 3674226 2153034..2153330 1 NC_007406.1 hypothetical protein 2153330 3674226 Nwi_1962 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318574.1 2153034 D 323098 CDS YP_318575.1 75676154 3674227 2153330..2153968 1 NC_007406.1 hypothetical protein 2153968 3674227 Nwi_1963 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318575.1 2153330 D 323098 CDS YP_318576.1 75676155 3674228 complement(2153913..2154893) 1 NC_007406.1 Fis family transcriptional regulator 2154893 3674228 Nwi_1964 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_318576.1 2153913 R 323098 CDS YP_318577.1 75676156 3674229 complement(2154890..2155264) 1 NC_007406.1 transposase IS3/IS911 2155264 3674229 Nwi_1965 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_318577.1 2154890 R 323098 CDS YP_318578.1 75676157 3674230 2156085..2156246 1 NC_007406.1 RNA polymerase ECF-type sigma factor, FecI 2156246 3674230 Nwi_1966 Nitrobacter winogradskyi Nb-255 RNA polymerase ECF-type sigma factor, FecI YP_318578.1 2156085 D 323098 CDS YP_318579.1 75676158 3674231 2156346..2156696 1 NC_007406.1 transposase 2156696 3674231 Nwi_1967 Nitrobacter winogradskyi Nb-255 transposase YP_318579.1 2156346 D 323098 CDS YP_318580.1 75676159 3674232 2156648..2157289 1 NC_007406.1 ISRm2011-2 transposase 2157289 3674232 Nwi_1968 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_318580.1 2156648 D 323098 CDS YP_318581.1 75676160 3674233 2157520..2158653 1 NC_007406.1 FecR protein 2158653 3674233 Nwi_1969 Nitrobacter winogradskyi Nb-255 FecR protein YP_318581.1 2157520 D 323098 CDS YP_318582.1 75676161 3674235 complement(2159373..2159816) 1 NC_007406.1 hypothetical protein 2159816 3674235 Nwi_1971 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318582.1 2159373 R 323098 CDS YP_318583.1 75676162 3674236 2160367..2160798 1 NC_007406.1 hypothetical protein 2160798 3674236 Nwi_1972 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318583.1 2160367 D 323098 CDS YP_318584.1 75676163 3674237 complement(2160930..2161757) 1 NC_007406.1 hypothetical protein 2161757 3674237 Nwi_1973 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318584.1 2160930 R 323098 CDS YP_318585.1 75676164 3674238 complement(2161763..2162395) 1 NC_007406.1 hypothetical protein 2162395 3674238 Nwi_1974 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318585.1 2161763 R 323098 CDS YP_318586.1 75676165 3674239 complement(2162409..2164769) 1 NC_007406.1 nitric oxide reductase activation protein 2164769 3674239 Nwi_1975 Nitrobacter winogradskyi Nb-255 nitric oxide reductase activation protein YP_318586.1 2162409 R 323098 CDS YP_318587.1 75676166 3674240 complement(2164862..2165785) 1 NC_007406.1 ATPase 2165785 3674240 Nwi_1976 Nitrobacter winogradskyi Nb-255 ATPase YP_318587.1 2164862 R 323098 CDS YP_318588.1 75676167 3674241 complement(2165806..2166033) 1 NC_007406.1 hypothetical protein 2166033 3674241 Nwi_1977 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318588.1 2165806 R 323098 CDS YP_318589.1 75676168 3674242 complement(2166030..2166665) 1 NC_007406.1 cobyrinic acid a,c-diamide synthase 2166665 3674242 Nwi_1978 Nitrobacter winogradskyi Nb-255 cobyrinic acid a,c-diamide synthase YP_318589.1 2166030 R 323098 CDS YP_318590.1 75676169 3674243 complement(2166669..2166935) 1 NC_007406.1 hypothetical protein 2166935 3674243 Nwi_1979 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318590.1 2166669 R 323098 CDS YP_318591.1 75676170 3674244 complement(2167218..2167559) 1 NC_007406.1 carboxysome structural peptide CsoS1B 2167559 3674244 Nwi_1980 Nitrobacter winogradskyi Nb-255 carboxysome structural peptide CsoS1B YP_318591.1 2167218 R 323098 CDS YP_318592.1 75676171 3674245 complement(2167601..2167897) 1 NC_007406.1 carboxysome structural polypeptide 2167897 3674245 Nwi_1981 Nitrobacter winogradskyi Nb-255 carboxysome structural polypeptide YP_318592.1 2167601 R 323098 CDS YP_318593.1 75676172 3674246 complement(2167991..2168245) 1 NC_007406.1 ethanolamine utilization protein EutN/carboxysome structural protein Ccml 2168245 3674246 Nwi_1982 Nitrobacter winogradskyi Nb-255 ethanolamine utilization protein EutN/carboxysome structural protein Ccml YP_318593.1 2167991 R 323098 CDS YP_318594.1 75676173 3674247 complement(2168242..2168499) 1 NC_007406.1 ethanolamine utilization protein EutN/carboxysome structural protein Ccml 2168499 3674247 Nwi_1983 Nitrobacter winogradskyi Nb-255 ethanolamine utilization protein EutN/carboxysome structural protein Ccml YP_318594.1 2168242 R 323098 CDS YP_318595.1 75676174 3674248 complement(2168513..2170039) 1 NC_007406.1 carboxysome shell polypeptide 2170039 3674248 Nwi_1984 Nitrobacter winogradskyi Nb-255 carboxysome shell polypeptide YP_318595.1 2168513 R 323098 CDS YP_318596.1 75676175 3674249 complement(2170051..2172753) 1 NC_007406.1 carboxysome shell protein 2172753 3674249 Nwi_1985 Nitrobacter winogradskyi Nb-255 carboxysome shell protein YP_318596.1 2170051 R 323098 CDS YP_318597.1 75676176 3674250 complement(2172859..2173185) 1 NC_007406.1 ribulose bisphosphate carboxylase, small chain 2173185 3674250 Nwi_1986 Nitrobacter winogradskyi Nb-255 ribulose bisphosphate carboxylase, small chain YP_318597.1 2172859 R 323098 CDS YP_318598.1 75676177 3674251 complement(2173260..2174681) 1 NC_007406.1 type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase 2174681 rbcL 3674251 rbcL Nitrobacter winogradskyi Nb-255 ribulose bisophosphate carboxylase YP_318598.1 2173260 R 323098 CDS YP_318599.1 75676178 3674252 2174913..2175848 1 NC_007406.1 LysR family transcriptional regulator 2175848 3674252 Nwi_1988 Nitrobacter winogradskyi Nb-255 LysR family transcriptional regulator YP_318599.1 2174913 D 323098 CDS YP_318600.1 75676179 3674253 complement(2175838..2176164) 1 NC_007406.1 hypothetical protein 2176164 3674253 Nwi_1989 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318600.1 2175838 R 323098 CDS YP_318601.1 75676180 3674254 complement(2176161..2179274) 1 NC_007406.1 hypothetical protein 2179274 3674254 Nwi_1990 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318601.1 2176161 R 323098 CDS YP_318602.1 75676181 3674255 complement(2179259..2180017) 1 NC_007406.1 hypothetical protein 2180017 3674255 Nwi_1991 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318602.1 2179259 R 323098 CDS YP_318603.1 75676182 3674256 complement(2180023..2181723) 1 NC_007406.1 NADH/ubiquinone/plastoquinone (complex I) 2181723 3674256 Nwi_1992 Nitrobacter winogradskyi Nb-255 NADH/ubiquinone/plastoquinone (complex I) YP_318603.1 2180023 R 323098 CDS YP_318604.1 75676183 3674257 2181935..2182228 1 NC_007406.1 hypothetical protein 2182228 3674257 Nwi_1993 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318604.1 2181935 D 323098 CDS YP_318605.1 75676184 3674258 2182328..2182603 1 NC_007406.1 hypothetical protein 2182603 3674258 Nwi_1994 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318605.1 2182328 D 323098 CDS YP_318606.1 75676185 3674259 complement(2182829..2183095) 1 NC_007406.1 hypothetical protein 2183095 3674259 Nwi_1995 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318606.1 2182829 R 323098 CDS YP_318607.1 75676186 3674260 complement(2184036..2184239) 1 NC_007406.1 hypothetical protein 2184239 3674260 Nwi_1996 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318607.1 2184036 R 323098 CDS YP_318608.1 75676187 3674185 complement(2184822..2186306) 1 NC_007406.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 2186306 gatB 3674185 gatB Nitrobacter winogradskyi Nb-255 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_318608.1 2184822 R 323098 CDS YP_318609.1 75676188 3674186 complement(2186375..2187754) 1 NC_007406.1 patatin 2187754 3674186 Nwi_1998 Nitrobacter winogradskyi Nb-255 patatin YP_318609.1 2186375 R 323098 CDS YP_318610.1 75676189 3674187 complement(2187953..2188669) 1 NC_007406.1 ISRm2011-2 transposase 2188669 3674187 Nwi_1999 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_318610.1 2187953 R 323098 CDS YP_318611.1 75676190 3674188 complement(2189084..2189386) 1 NC_007406.1 hypothetical protein 2189386 3674188 Nwi_2000 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318611.1 2189084 R 323098 CDS YP_318612.1 75676191 3674189 complement(2189383..2190858) 1 NC_007406.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 2190858 gatA 3674189 gatA Nitrobacter winogradskyi Nb-255 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_318612.1 2189383 R 323098 CDS YP_318613.1 75676192 3674190 complement(2190855..2191061) 1 NC_007406.1 hypothetical protein 2191061 3674190 Nwi_2002 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318613.1 2190855 R 323098 CDS YP_318614.1 75676193 3674191 complement(2191076..2191363) 1 NC_007406.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 2191363 gatC 3674191 gatC Nitrobacter winogradskyi Nb-255 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_318614.1 2191076 R 323098 CDS YP_318615.1 75676194 3674192 2191626..2192117 1 NC_007406.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 2192117 3674192 Nwi_2004 Nitrobacter winogradskyi Nb-255 Holliday junction resolvase-like protein YP_318615.1 2191626 D 323098 CDS YP_318616.1 75676195 3674193 complement(2192118..2192906) 1 NC_007406.1 abortive infection protein 2192906 3674193 Nwi_2005 Nitrobacter winogradskyi Nb-255 abortive infection protein YP_318616.1 2192118 R 323098 CDS YP_318617.1 75676196 3674194 complement(2193042..2194682) 1 NC_007406.1 acyl-CoA dehydrogenase 2194682 3674194 Nwi_2006 Nitrobacter winogradskyi Nb-255 acyl-CoA dehydrogenase YP_318617.1 2193042 R 323098 CDS YP_318618.1 75676197 3674195 2194720..2195808 1 NC_007406.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 2195808 pyrB 3674195 pyrB Nitrobacter winogradskyi Nb-255 aspartate carbamoyltransferase YP_318618.1 2194720 D 323098 CDS YP_318619.1 75676198 3674196 2195887..2197188 1 NC_007406.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 2197188 3674196 Nwi_2008 Nitrobacter winogradskyi Nb-255 dihydroorotase YP_318619.1 2195887 D 323098 CDS YP_318620.1 75676199 3674197 2197441..2198031 1 NC_007406.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY 2198031 3674197 Nwi_2009 Nitrobacter winogradskyi Nb-255 glycerol-3-phosphate acyltransferase PlsY YP_318620.1 2197441 D 323098 CDS YP_318621.1 75676200 3674198 2198062..2199180 1 NC_007406.1 SMF protein 2199180 3674198 Nwi_2010 Nitrobacter winogradskyi Nb-255 SMF protein YP_318621.1 2198062 D 323098 CDS YP_318622.1 75676201 3674199 complement(2199310..2200587) 1 NC_007406.1 hypothetical protein 2200587 3674199 Nwi_2011 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318622.1 2199310 R 323098 CDS YP_318623.1 75676202 3674200 2200927..2202171 1 NC_007406.1 cyclopropane-fatty-acyl-phospholipid synthase 2202171 3674200 Nwi_2012 Nitrobacter winogradskyi Nb-255 cyclopropane-fatty-acyl-phospholipid synthase YP_318623.1 2200927 D 323098 CDS YP_318624.1 75676203 3674201 2202451..2203941 1 NC_007406.1 unwinds double stranded DNA; replicative DNA helicase 2203941 3674201 Nwi_2013 Nitrobacter winogradskyi Nb-255 replicative DNA helicase YP_318624.1 2202451 D 323098 CDS YP_318625.1 75676204 3674202 2204009..2205196 1 NC_007406.1 alanine racemase 2205196 3674202 Nwi_2014 Nitrobacter winogradskyi Nb-255 alanine racemase YP_318625.1 2204009 D 323098 CDS YP_318626.1 75676205 3674203 2205207..2206667 1 NC_007406.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 2206667 3674203 Nwi_2015 Nitrobacter winogradskyi Nb-255 DNA repair protein RadA YP_318626.1 2205207 D 323098 CDS YP_318627.1 75676206 3677086 2206872..2207504 1 NC_007406.1 colicin V production protein 2207504 3677086 Nwi_2016 Nitrobacter winogradskyi Nb-255 colicin V production protein YP_318627.1 2206872 D 323098 CDS YP_318628.1 75676207 3677087 2207564..2209078 1 NC_007406.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 2209078 3677087 Nwi_2017 Nitrobacter winogradskyi Nb-255 amidophosphoribosyltransferase YP_318628.1 2207564 D 323098 CDS YP_318629.1 75676208 3677088 complement(2209107..2209640) 1 NC_007406.1 N-acetyltransferase 2209640 3677088 Nwi_2018 Nitrobacter winogradskyi Nb-255 N-acetyltransferase YP_318629.1 2209107 R 323098 CDS YP_318630.1 75676209 3677089 2209690..2210442 1 NC_007406.1 short-chain dehydrogenase/reductase SDR 2210442 3677089 Nwi_2019 Nitrobacter winogradskyi Nb-255 short-chain dehydrogenase/reductase SDR YP_318630.1 2209690 D 323098 CDS YP_318631.1 75676210 3677090 complement(2210944..2212311) 1 NC_007406.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 2212311 engA 3677090 engA Nitrobacter winogradskyi Nb-255 GTP-binding protein EngA YP_318631.1 2210944 R 323098 CDS YP_318632.1 75676211 3677091 complement(2212425..2212943) 1 NC_007406.1 hypothetical protein 2212943 3677091 Nwi_2021 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318632.1 2212425 R 323098 CDS YP_318633.1 75676212 3677092 complement(2212983..2213636) 1 NC_007406.1 hypothetical protein 2213636 3677092 Nwi_2022 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318633.1 2212983 R 323098 CDS YP_318634.1 75676213 3677093 complement(2214009..2215817) 1 NC_007406.1 hypothetical protein 2215817 3677093 Nwi_2023 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318634.1 2214009 R 323098 CDS YP_318635.1 75676214 3677094 complement(2216093..2216917) 1 NC_007406.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2216917 panB 3677094 panB Nitrobacter winogradskyi Nb-255 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_318635.1 2216093 R 323098 CDS YP_318636.1 75676215 3677095 complement(2216919..2217488) 1 NC_007406.1 protein NnrU 2217488 3677095 Nwi_2025 Nitrobacter winogradskyi Nb-255 protein NnrU YP_318636.1 2216919 R 323098 CDS YP_318637.1 75676216 3677096 2217673..2217993 1 NC_007406.1 hypothetical protein 2217993 3677096 Nwi_2026 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318637.1 2217673 D 323098 CDS YP_318638.1 75676217 3677097 complement(2218049..2219668) 1 NC_007406.1 peptide chain release factor 3 2219668 3677097 Nwi_2027 Nitrobacter winogradskyi Nb-255 peptide chain release factor 3 YP_318638.1 2218049 R 323098 CDS YP_318639.1 75676218 3677098 2219834..2220034 1 NC_007406.1 small multidrug resistance protein SugE 2220034 3677098 Nwi_2028 Nitrobacter winogradskyi Nb-255 small multidrug resistance protein SugE YP_318639.1 2219834 D 323098 CDS YP_318640.1 75676219 3677099 complement(2220009..2220650) 1 NC_007406.1 ISRm2011-2 transposase 2220650 3677099 Nwi_2029 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_318640.1 2220009 R 323098 CDS YP_318641.1 75676220 3677100 complement(2220602..2220952) 1 NC_007406.1 transposase 2220952 3677100 Nwi_2030 Nitrobacter winogradskyi Nb-255 transposase YP_318641.1 2220602 R 323098 CDS YP_318642.1 75676221 3677101 complement(2221208..2222212) 1 NC_007406.1 phosphate transporter 2222212 3677101 Nwi_2031 Nitrobacter winogradskyi Nb-255 phosphate transporter YP_318642.1 2221208 R 323098 CDS YP_318643.1 75676222 3677102 complement(2222227..2222874) 1 NC_007406.1 hypothetical protein 2222874 3677102 Nwi_2032 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318643.1 2222227 R 323098 CDS YP_318644.1 75676223 3677103 complement(2223072..2223437) 1 NC_007406.1 hypothetical protein 2223437 3677103 Nwi_2033 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318644.1 2223072 R 323098 CDS YP_318645.1 75676224 3677104 2223472..2223936 1 NC_007406.1 hypothetical protein 2223936 3677104 Nwi_2034 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318645.1 2223472 D 323098 CDS YP_318646.1 75676225 3677105 2224074..2226134 1 NC_007406.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); threonyl-tRNA synthetase 2226134 thrS 3677105 thrS Nitrobacter winogradskyi Nb-255 threonyl-tRNA synthetase YP_318646.1 2224074 D 323098 CDS YP_318647.1 75676226 3675815 2226414..2226977 1 NC_007406.1 nitroreductase 2226977 3675815 Nwi_2036 Nitrobacter winogradskyi Nb-255 nitroreductase YP_318647.1 2226414 D 323098 CDS YP_318648.1 75676227 3675816 complement(2227075..2227545) 1 NC_007406.1 hypothetical protein 2227545 3675816 Nwi_2037 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318648.1 2227075 R 323098 CDS YP_318649.1 75676228 3675817 complement(2227696..2228499) 1 NC_007406.1 TonB-like protein 2228499 3675817 Nwi_2038 Nitrobacter winogradskyi Nb-255 TonB-like protein YP_318649.1 2227696 R 323098 CDS YP_318650.1 75676229 3675818 complement(2228496..2228966) 1 NC_007406.1 biopolymer transport protein ExbD/TolR 2228966 3675818 Nwi_2039 Nitrobacter winogradskyi Nb-255 biopolymer transport protein ExbD/TolR YP_318650.1 2228496 R 323098 CDS YP_318651.1 75676230 3675819 complement(2228973..2230238) 1 NC_007406.1 MotA/TolQ/ExbB proton channel 2230238 3675819 Nwi_2040 Nitrobacter winogradskyi Nb-255 MotA/TolQ/ExbB proton channel YP_318651.1 2228973 R 323098 CDS YP_318652.1 75676231 3675820 complement(2230308..2232245) 1 NC_007406.1 ABC transporter ATPase 2232245 3675820 Nwi_2041 Nitrobacter winogradskyi Nb-255 ABC transporter ATPase YP_318652.1 2230308 R 323098 CDS YP_318653.1 75676232 3675821 complement(2232242..2233486) 1 NC_007406.1 secretion protein HlyD 2233486 3675821 Nwi_2042 Nitrobacter winogradskyi Nb-255 secretion protein HlyD YP_318653.1 2232242 R 323098 CDS YP_318654.1 75676233 3675822 complement(2233491..2233817) 1 NC_007406.1 hypothetical protein 2233817 3675822 Nwi_2043 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318654.1 2233491 R 323098 CDS YP_318655.1 75676234 3675823 complement(2233814..2234344) 1 NC_007406.1 hypothetical protein 2234344 3675823 Nwi_2044 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318655.1 2233814 R 323098 CDS YP_318656.1 75676235 3675825 2234669..2235043 1 NC_007406.1 transposase IS3/IS911 2235043 3675825 Nwi_2046 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_318656.1 2234669 D 323098 CDS YP_318657.1 75676236 3675826 2235040..2236020 1 NC_007406.1 Fis family transcriptional regulator 2236020 3675826 Nwi_2047 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_318657.1 2235040 D 323098 CDS YP_318658.1 75676237 3675827 complement(2235965..2236459) 1 NC_007406.1 fec I like protein 2236459 3675827 Nwi_2048 Nitrobacter winogradskyi Nb-255 fec I like protein YP_318658.1 2235965 R 323098 CDS YP_318659.1 75676238 3675828 complement(2236618..2239119) 1 NC_007406.1 TonB-dependent siderophore receptor 2239119 3675828 Nwi_2049 Nitrobacter winogradskyi Nb-255 TonB-dependent siderophore receptor YP_318659.1 2236618 R 323098 CDS YP_318660.1 75676239 3675829 complement(2239519..2240508) 1 NC_007406.1 FecR, iron siderophore sensor protein 2240508 3675829 Nwi_2050 Nitrobacter winogradskyi Nb-255 FecR, iron siderophore sensor protein YP_318660.1 2239519 R 323098 CDS YP_318661.1 75676240 3675830 complement(2240573..2241103) 1 NC_007406.1 fec I like protein 2241103 3675830 Nwi_2051 Nitrobacter winogradskyi Nb-255 fec I like protein YP_318661.1 2240573 R 323098 CDS YP_318662.1 75676241 3675831 complement(2241358..2241843) 1 NC_007406.1 hypothetical protein 2241843 3675831 Nwi_2052 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318662.1 2241358 R 323098 CDS YP_318663.1 75676242 3675832 complement(2241933..2242703) 1 NC_007406.1 TonB-like protein 2242703 3675832 Nwi_2053 Nitrobacter winogradskyi Nb-255 TonB-like protein YP_318663.1 2241933 R 323098 CDS YP_318664.1 75676243 3675833 complement(2243522..2243935) 1 NC_007406.1 hypothetical protein 2243935 3675833 Nwi_2054 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318664.1 2243522 R 323098 CDS YP_318665.1 75676244 3676716 complement(2244551..2245201) 1 NC_007406.1 hypothetical protein 2245201 3676716 Nwi_2055 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318665.1 2244551 R 323098 CDS YP_318666.1 75676245 3676717 complement(2245427..2246101) 1 NC_007406.1 hypothetical protein 2246101 3676717 Nwi_2056 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318666.1 2245427 R 323098 CDS YP_318667.1 75676246 3676719 2246844..2247122 1 NC_007406.1 hypothetical protein 2247122 3676719 Nwi_2057 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318667.1 2246844 D 323098 CDS YP_318668.1 75676247 3676720 2247186..2247518 1 NC_007406.1 hypothetical protein 2247518 3676720 Nwi_2058 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318668.1 2247186 D 323098 CDS YP_318669.1 75676248 3676721 2247625..2247975 1 NC_007406.1 transposase 2247975 3676721 Nwi_2059 Nitrobacter winogradskyi Nb-255 transposase YP_318669.1 2247625 D 323098 CDS YP_318670.1 75676249 3676722 2247927..2248568 1 NC_007406.1 ISRm2011-2 transposase 2248568 3676722 Nwi_2060 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_318670.1 2247927 D 323098 CDS YP_318671.1 75676250 3676723 2249925..2250650 1 NC_007406.1 Crp/Fnr family transcriptional regulator 2250650 3676723 Nwi_2061 Nitrobacter winogradskyi Nb-255 Crp/Fnr family transcriptional regulator YP_318671.1 2249925 D 323098 CDS YP_318672.1 75676251 3676724 2251111..2251962 1 NC_007406.1 RNA methyltransferase TrmH, group 3 2251962 3676724 Nwi_2062 Nitrobacter winogradskyi Nb-255 RNA methyltransferase TrmH, group 3 YP_318672.1 2251111 D 323098 CDS YP_318673.1 75676252 3676725 complement(2252021..2252581) 1 NC_007406.1 hypothetical protein 2252581 3676725 Nwi_2063 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318673.1 2252021 R 323098 CDS YP_318674.1 75676253 3676726 complement(2252625..2253071) 1 NC_007406.1 hypothetical protein 2253071 3676726 Nwi_2064 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318674.1 2252625 R 323098 CDS YP_318675.1 75676254 3676728 complement(2254215..2255954) 1 NC_007406.1 sulfate transporter/antisigma-factor antagonist STAS 2255954 3676728 Nwi_2065 Nitrobacter winogradskyi Nb-255 sulfate transporter/antisigma-factor antagonist STAS YP_318675.1 2254215 R 323098 CDS YP_318676.1 75676255 3676729 complement(2256324..2256776) 1 NC_007406.1 hypothetical protein 2256776 3676729 Nwi_2066 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318676.1 2256324 R 323098 CDS YP_318677.1 75676256 3675482 2256915..2258285 1 NC_007406.1 L-sorbosone dehydrogenase (SNDH) 2258285 3675482 Nwi_2067 Nitrobacter winogradskyi Nb-255 L-sorbosone dehydrogenase (SNDH) YP_318677.1 2256915 D 323098 CDS YP_318678.1 75676257 3675483 complement(2258767..2262411) 1 NC_007406.1 nitrate reductase subunit alpha 2262411 3675483 Nwi_2068 Nitrobacter winogradskyi Nb-255 nitrate reductase subunit alpha YP_318678.1 2258767 R 323098 CDS YP_318679.1 75676258 3675484 2263467..2266580 1 NC_007406.1 hypothetical protein 2266580 3675484 Nwi_2069 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318679.1 2263467 D 323098 CDS YP_318680.1 75676259 3675485 2266953..2267210 1 NC_007406.1 hypothetical protein 2267210 3675485 Nwi_2070 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318680.1 2266953 D 323098 CDS YP_318681.1 75676260 3675486 2267916..2268998 1 NC_007406.1 luciferase-like protein 2268998 3675486 Nwi_2071 Nitrobacter winogradskyi Nb-255 luciferase-like protein YP_318681.1 2267916 D 323098 CDS YP_318682.1 75676261 3675487 complement(2269061..2271421) 1 NC_007406.1 TonB-dependent receptor 2271421 3675487 Nwi_2072 Nitrobacter winogradskyi Nb-255 TonB-dependent receptor YP_318682.1 2269061 R 323098 CDS YP_318683.1 75676262 3675488 2271751..2272782 1 NC_007406.1 periplasmic binding protein 2272782 3675488 Nwi_2073 Nitrobacter winogradskyi Nb-255 periplasmic binding protein YP_318683.1 2271751 D 323098 CDS YP_318684.1 75676263 3675489 complement(2272789..2273619) 1 NC_007406.1 ABC transporter ATPase 2273619 3675489 Nwi_2074 Nitrobacter winogradskyi Nb-255 ABC transporter ATPase YP_318684.1 2272789 R 323098 CDS YP_318685.1 75676264 3675490 complement(2273616..2274617) 1 NC_007406.1 ABC-type Fe3+-siderophore transport system permease component 2274617 3675490 Nwi_2075 Nitrobacter winogradskyi Nb-255 ABC-type Fe3+-siderophore transport system permease component YP_318685.1 2273616 R 323098 CDS YP_318686.1 75676265 3675491 complement(2275009..2276610) 1 NC_007406.1 TonB-dependent receptor 2276610 3675491 Nwi_2076 Nitrobacter winogradskyi Nb-255 TonB-dependent receptor YP_318686.1 2275009 R 323098 CDS YP_318687.1 75676266 3675492 2276719..2277789 1 NC_007406.1 IstB-like ATP-binding protein 2277789 3675492 Nwi_2077 Nitrobacter winogradskyi Nb-255 IstB-like ATP-binding protein YP_318687.1 2276719 D 323098 CDS YP_318688.1 75676267 3675493 2278420..2278800 1 NC_007406.1 XRE family transcriptional regulator 2278800 3675493 Nwi_2078 Nitrobacter winogradskyi Nb-255 XRE family transcriptional regulator YP_318688.1 2278420 D 323098 CDS YP_318689.1 75676268 3675494 2278800..2280032 1 NC_007406.1 hypothetical protein 2280032 3675494 Nwi_2079 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318689.1 2278800 D 323098 CDS YP_318690.1 75676269 3677242 2280841..2281215 1 NC_007406.1 transposase IS3/IS911 2281215 3677242 Nwi_2081 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_318690.1 2280841 D 323098 CDS YP_318691.1 75676270 3677243 2281212..2282192 1 NC_007406.1 Fis family transcriptional regulator 2282192 3677243 Nwi_2082 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_318691.1 2281212 D 323098 CDS YP_318692.1 75676271 3677244 2282434..2282958 1 NC_007406.1 hypothetical protein 2282958 3677244 Nwi_2083 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318692.1 2282434 D 323098 CDS YP_318693.1 75676272 3677245 2283062..2283469 1 NC_007406.1 hypothetical protein 2283469 3677245 Nwi_2084 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318693.1 2283062 D 323098 CDS YP_318694.1 75676273 3677246 2283584..2284480 1 NC_007406.1 hypothetical protein 2284480 3677246 Nwi_2085 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318694.1 2283584 D 323098 CDS YP_318695.1 75676274 3677247 2284473..2284727 1 NC_007406.1 hypothetical protein 2284727 3677247 Nwi_2086 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318695.1 2284473 D 323098 CDS YP_318696.1 75676275 3674644 2284729..2285298 1 NC_007406.1 hypothetical protein 2285298 3674644 Nwi_2087 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318696.1 2284729 D 323098 CDS YP_318697.1 75676276 3674645 complement(2285291..2287834) 1 NC_007406.1 hypothetical protein 2287834 3674645 Nwi_2088 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318697.1 2285291 R 323098 CDS YP_318698.1 75676277 3674646 complement(2287887..2288897) 1 NC_007406.1 ATPase AAA 2288897 3674646 Nwi_2089 Nitrobacter winogradskyi Nb-255 ATPase AAA YP_318698.1 2287887 R 323098 CDS YP_318699.1 75676278 3674647 complement(2289103..2289339) 1 NC_007406.1 hypothetical protein 2289339 3674647 Nwi_2090 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318699.1 2289103 R 323098 CDS YP_318700.1 75676279 3674648 complement(2289336..2290544) 1 NC_007406.1 conjugation TrbI-like protein 2290544 3674648 Nwi_2091 Nitrobacter winogradskyi Nb-255 conjugation TrbI-like protein YP_318700.1 2289336 R 323098 CDS YP_318701.1 75676280 3674649 complement(2290544..2291563) 1 NC_007406.1 conjugal transfer protein TrbG/VirB9/CagX 2291563 3674649 Nwi_2092 Nitrobacter winogradskyi Nb-255 conjugal transfer protein TrbG/VirB9/CagX YP_318701.1 2290544 R 323098 CDS YP_318702.1 75676281 3674650 complement(2291563..2292249) 1 NC_007406.1 conjugal transfer protein TrbF 2292249 3674650 Nwi_2093 Nitrobacter winogradskyi Nb-255 conjugal transfer protein TrbF YP_318702.1 2291563 R 323098 CDS YP_318703.1 75676282 3674651 complement(2292318..2293562) 1 NC_007406.1 type IV secretion VirB6 family; conjugal transfer protein TrbL 2293562 3674651 Nwi_2094 Nitrobacter winogradskyi Nb-255 conjugal transfer protein TrbL YP_318703.1 2292318 R 323098 CDS YP_318704.1 75676283 3674652 complement(2293559..2293825) 1 NC_007406.1 hypothetical protein 2293825 3674652 Nwi_2095 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318704.1 2293559 R 323098 CDS YP_318705.1 75676284 3674653 complement(2293836..2294585) 1 NC_007406.1 conjugal transfer protein TrbJ 2294585 3674653 Nwi_2096 Nitrobacter winogradskyi Nb-255 conjugal transfer protein TrbJ YP_318705.1 2293836 R 323098 CDS YP_318706.1 75676285 3674654 complement(2294582..2295052) 1 NC_007406.1 type IV secretion system protein VirB4 2295052 3674654 Nwi_2097 Nitrobacter winogradskyi Nb-255 type IV secretion system protein VirB4 YP_318706.1 2294582 R 323098 CDS YP_318707.1 75676286 3674655 complement(2295082..2296287) 1 NC_007406.1 conjugal transfer protein trbE 2296287 3674655 Nwi_2098 Nitrobacter winogradskyi Nb-255 conjugal transfer protein trbE YP_318707.1 2295082 R 323098 CDS YP_318708.1 75676287 3674656 complement(2296440..2297420) 1 NC_007406.1 Fis family transcriptional regulator 2297420 3674656 Nwi_2099 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_318708.1 2296440 R 323098 CDS YP_318709.1 75676288 3674657 complement(2297417..2297791) 1 NC_007406.1 transposase IS3/IS911 2297791 3674657 Nwi_2100 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_318709.1 2297417 R 323098 CDS YP_318710.1 75676289 3674660 2300514..2300864 1 NC_007406.1 transposase 2300864 3674660 Nwi_2103 Nitrobacter winogradskyi Nb-255 transposase YP_318710.1 2300514 D 323098 CDS YP_318711.1 75676290 3674661 2300816..2301457 1 NC_007406.1 ISRm2011-2 transposase 2301457 3674661 Nwi_2104 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_318711.1 2300816 D 323098 CDS YP_318712.1 75676291 3674662 complement(2301607..2302056) 1 NC_007406.1 integrase 2302056 3674662 Nwi_2105 Nitrobacter winogradskyi Nb-255 integrase YP_318712.1 2301607 R 323098 CDS YP_318713.1 75676292 3675453 complement(2302049..2302867) 1 NC_007406.1 integrase 2302867 3675453 Nwi_2106 Nitrobacter winogradskyi Nb-255 integrase YP_318713.1 2302049 R 323098 CDS YP_318714.1 75676293 3675454 2302978..2303328 1 NC_007406.1 transposase 2303328 3675454 Nwi_2107 Nitrobacter winogradskyi Nb-255 transposase YP_318714.1 2302978 D 323098 CDS YP_318715.1 75676294 3675455 2303280..2303963 1 NC_007406.1 transposase for insertion sequence element ISRM11/ISRM2011-2 2303963 3675455 Nwi_2108 Nitrobacter winogradskyi Nb-255 transposase for insertion sequence element ISRM11/ISRM2011-2 YP_318715.1 2303280 D 323098 CDS YP_318716.1 75676295 3675456 2304572..2305747 1 NC_007406.1 Fic family protein 2305747 3675456 Nwi_2109 Nitrobacter winogradskyi Nb-255 Fic family protein YP_318716.1 2304572 D 323098 CDS YP_318717.1 75676296 3675457 2305885..2306217 1 NC_007406.1 hypothetical protein 2306217 3675457 Nwi_2110 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318717.1 2305885 D 323098 CDS YP_318718.1 75676297 3675458 complement(2306249..2308474) 1 NC_007406.1 amylo-alpha-1,6-glucosidase 2308474 3675458 Nwi_2111 Nitrobacter winogradskyi Nb-255 amylo-alpha-1,6-glucosidase YP_318718.1 2306249 R 323098 CDS YP_318719.1 75676298 3675459 complement(2308486..2309583) 1 NC_007406.1 group 1 glycosyl transferase 2309583 3675459 Nwi_2112 Nitrobacter winogradskyi Nb-255 group 1 glycosyl transferase YP_318719.1 2308486 R 323098 CDS YP_318720.1 75676299 3675460 complement(2309728..2311356) 1 NC_007406.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; the rhizobia and high GC gram-positive bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the R. leguminosarum protein in this cluster is transcribed under anaerobic conditions and is not necessary for growth; molecular chaperone GroEL 2311356 groEL 3675460 groEL Nitrobacter winogradskyi Nb-255 molecular chaperone GroEL YP_318720.1 2309728 R 323098 CDS YP_318721.1 75676300 3675461 complement(2311406..2311720) 1 NC_007406.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 2311720 groES 3675461 groES Nitrobacter winogradskyi Nb-255 co-chaperonin GroES YP_318721.1 2311406 R 323098 CDS YP_318722.1 75676301 3675462 2312054..2312398 1 NC_007406.1 hypothetical protein 2312398 3675462 Nwi_2115 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318722.1 2312054 D 323098 CDS YP_318723.1 75676302 3675463 2312433..2312594 1 NC_007406.1 hypothetical protein 2312594 3675463 Nwi_2116 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318723.1 2312433 D 323098 CDS YP_318724.1 75676303 3675464 2313173..2313637 1 NC_007406.1 heat shock protein Hsp20 2313637 3675464 Nwi_2117 Nitrobacter winogradskyi Nb-255 heat shock protein Hsp20 YP_318724.1 2313173 D 323098 CDS YP_318725.1 75676304 3675465 2313720..2314220 1 NC_007406.1 heat shock protein Hsp20 2314220 3675465 Nwi_2118 Nitrobacter winogradskyi Nb-255 heat shock protein Hsp20 YP_318725.1 2313720 D 323098 CDS YP_318726.1 75676305 3675466 2314320..2314649 1 NC_007406.1 transposase IS3/IS911 2314649 3675466 Nwi_2119 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_318726.1 2314320 D 323098 CDS YP_318727.1 75676306 3675467 2314646..2315551 1 NC_007406.1 integrase, catalytic region 2315551 3675467 Nwi_2120 Nitrobacter winogradskyi Nb-255 integrase, catalytic region YP_318727.1 2314646 D 323098 CDS YP_318728.1 75676307 3675468 2315712..2316665 1 NC_007406.1 antirestriction protein; ArdC 2316665 3675468 Nwi_2121 Nitrobacter winogradskyi Nb-255 antirestriction protein; ArdC YP_318728.1 2315712 D 323098 CDS YP_318729.1 75676308 3675469 2316662..2317033 1 NC_007406.1 hypothetical protein 2317033 3675469 Nwi_2122 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318729.1 2316662 D 323098 CDS YP_318730.1 75676309 3675470 2317208..2319361 1 NC_007406.1 hypothetical protein 2319361 3675470 Nwi_2123 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318730.1 2317208 D 323098 CDS YP_318731.1 75676310 3675471 2319422..2319643 1 NC_007406.1 hypothetical protein 2319643 3675471 Nwi_2124 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318731.1 2319422 D 323098 CDS YP_318732.1 75676311 3675472 2319714..2320424 1 NC_007406.1 hypothetical protein 2320424 3675472 Nwi_2125 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318732.1 2319714 D 323098 CDS YP_318733.1 75676312 3677067 2320464..2321063 1 NC_007406.1 hypothetical protein 2321063 3677067 Nwi_2126 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318733.1 2320464 D 323098 CDS YP_318734.1 75676313 3677068 2321060..2321302 1 NC_007406.1 hypothetical protein 2321302 3677068 Nwi_2127 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318734.1 2321060 D 323098 CDS YP_318735.1 75676314 3677069 2321440..2325780 1 NC_007406.1 methylase/helicase 2325780 3677069 Nwi_2128 Nitrobacter winogradskyi Nb-255 methylase/helicase YP_318735.1 2321440 D 323098 CDS YP_318736.1 75676315 3677070 2325780..2326841 1 NC_007406.1 hypothetical protein 2326841 3677070 Nwi_2129 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318736.1 2325780 D 323098 CDS YP_318737.1 75676316 3677071 2327176..2328099 1 NC_007406.1 hypothetical protein 2328099 3677071 Nwi_2130 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318737.1 2327176 D 323098 CDS YP_318738.1 75676317 3677072 2328371..2331670 1 NC_007406.1 DEAD/DEAH box helicase 2331670 3677072 Nwi_2131 Nitrobacter winogradskyi Nb-255 DEAD/DEAH box helicase YP_318738.1 2328371 D 323098 CDS YP_318739.1 75676318 3677073 2331839..2332348 1 NC_007406.1 hypothetical protein 2332348 3677073 Nwi_2132 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318739.1 2331839 D 323098 CDS YP_318740.1 75676319 3677074 complement(2332561..2332884) 1 NC_007406.1 hypothetical protein 2332884 3677074 Nwi_2133 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318740.1 2332561 R 323098 CDS YP_318741.1 75676320 3677075 2332922..2333245 1 NC_007406.1 hypothetical protein 2333245 3677075 Nwi_2134 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318741.1 2332922 D 323098 CDS YP_318742.1 75676321 3677076 complement(2333525..2334505) 1 NC_007406.1 Fis family transcriptional regulator 2334505 3677076 Nwi_2135 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_318742.1 2333525 R 323098 CDS YP_318743.1 75676322 3677077 complement(2334502..2334876) 1 NC_007406.1 transposase IS3/IS911 2334876 3677077 Nwi_2136 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_318743.1 2334502 R 323098 CDS YP_318744.1 75676323 3677079 complement(2335204..2336091) 1 NC_007406.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor SigJ 2336091 3677079 Nwi_2138 Nitrobacter winogradskyi Nb-255 RNA polymerase sigma factor SigJ YP_318744.1 2335204 R 323098 CDS YP_318745.1 75676324 3677080 complement(2336084..2336419) 1 NC_007406.1 antibiotic biosynthesis monooxygenase 2336419 3677080 Nwi_2139 Nitrobacter winogradskyi Nb-255 antibiotic biosynthesis monooxygenase YP_318745.1 2336084 R 323098 CDS YP_318746.1 75676325 3677081 complement(2336775..2337008) 1 NC_007406.1 LysR family transcriptional regulator 2337008 3677081 Nwi_2140 Nitrobacter winogradskyi Nb-255 LysR family transcriptional regulator YP_318746.1 2336775 R 323098 CDS YP_318747.1 75676326 3677082 2337465..2337761 1 NC_007406.1 prophage CP4-57 regulator 2337761 3677082 Nwi_2141 Nitrobacter winogradskyi Nb-255 prophage CP4-57 regulator YP_318747.1 2337465 D 323098 CDS YP_318748.1 75676327 3677083 complement(2337715..2338971) 1 NC_007406.1 phage integrase 2338971 3677083 Nwi_2142 Nitrobacter winogradskyi Nb-255 phage integrase YP_318748.1 2337715 R 323098 CDS YP_318749.1 75676328 3677084 complement(2339269..2340876) 1 NC_007406.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 2340876 guaA 3677084 guaA Nitrobacter winogradskyi Nb-255 GMP synthase YP_318749.1 2339269 R 323098 CDS YP_318750.1 75676329 3677085 complement(2341024..2342322) 1 NC_007406.1 tRNA and rRNA cytosine-C5-methylase 2342322 3677085 Nwi_2144 Nitrobacter winogradskyi Nb-255 tRNA and rRNA cytosine-C5-methylase YP_318750.1 2341024 R 323098 CDS YP_318751.1 75676330 3674563 complement(2342432..2343088) 1 NC_007406.1 hypothetical protein 2343088 3674563 Nwi_2145 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318751.1 2342432 R 323098 CDS YP_318752.1 75676331 3674564 complement(2343193..2344689) 1 NC_007406.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 2344689 3674564 Nwi_2146 Nitrobacter winogradskyi Nb-255 inosine 5'-monophosphate dehydrogenase YP_318752.1 2343193 R 323098 CDS YP_318753.1 75676332 3674565 complement(2344996..2345244) 1 NC_007406.1 hypothetical protein 2345244 3674565 Nwi_2147 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318753.1 2344996 R 323098 CDS YP_318754.1 75676333 3674566 2345363..2346835 1 NC_007406.1 EmrB/QacA family drug resistance transporter 2346835 3674566 Nwi_2148 Nitrobacter winogradskyi Nb-255 EmrB/QacA family drug resistance transporter YP_318754.1 2345363 D 323098 CDS YP_318755.1 75676334 3674567 2346868..2347539 1 NC_007406.1 hypothetical protein 2347539 3674567 Nwi_2149 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318755.1 2346868 D 323098 CDS YP_318756.1 75676335 3674568 complement(2347545..2348237) 1 NC_007406.1 ribosomal RNA methyltransferase RrmJ/FtsJ 2348237 3674568 Nwi_2150 Nitrobacter winogradskyi Nb-255 ribosomal RNA methyltransferase RrmJ/FtsJ YP_318756.1 2347545 R 323098 CDS YP_318757.1 75676336 3674569 complement(2348403..2349470) 1 NC_007406.1 Ppx/GppA phosphatase 2349470 3674569 Nwi_2151 Nitrobacter winogradskyi Nb-255 Ppx/GppA phosphatase YP_318757.1 2348403 R 323098 CDS YP_318758.1 75676337 3674570 2349865..2350338 1 NC_007406.1 hypothetical protein 2350338 3674570 Nwi_2152 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318758.1 2349865 D 323098 CDS YP_318759.1 75676338 3674571 2350344..2352152 1 NC_007406.1 ABC transporter ATPase 2352152 3674571 Nwi_2153 Nitrobacter winogradskyi Nb-255 ABC transporter ATPase YP_318759.1 2350344 D 323098 CDS YP_318760.1 75676339 3674572 complement(2352157..2353383) 1 NC_007406.1 hypothetical protein 2353383 3674572 Nwi_2154 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318760.1 2352157 R 323098 CDS YP_318761.1 75676340 3674573 complement(2353405..2353881) 1 NC_007406.1 acyl dehydratase MaoC 2353881 3674573 Nwi_2155 Nitrobacter winogradskyi Nb-255 acyl dehydratase MaoC YP_318761.1 2353405 R 323098 CDS YP_318762.1 75676341 3674574 complement(2353950..2354849) 1 NC_007406.1 3-hydroxyisobutyrate dehydrogenase 2354849 3674574 Nwi_2156 Nitrobacter winogradskyi Nb-255 3-hydroxyisobutyrate dehydrogenase YP_318762.1 2353950 R 323098 CDS YP_318763.1 75676342 3674575 complement(2354988..2356061) 1 NC_007406.1 catalyzes the formation of 3-hydroxy-2-methylpropanoate from 3-hydroxy-2-methylpropanoyl-CoA; 3-hydroxyisobutyryl-CoA hydrolase 2356061 3674575 Nwi_2157 Nitrobacter winogradskyi Nb-255 3-hydroxyisobutyryl-CoA hydrolase YP_318763.1 2354988 R 323098 CDS YP_318764.1 75676343 3674576 complement(2356058..2357203) 1 NC_007406.1 acyl-CoA dehydrogenase 2357203 3674576 Nwi_2158 Nitrobacter winogradskyi Nb-255 acyl-CoA dehydrogenase YP_318764.1 2356058 R 323098 CDS YP_318765.1 75676344 3674577 complement(2357220..2358752) 1 NC_007406.1 methylmalonate-semialdehyde dehydrogenase 2358752 3674577 Nwi_2159 Nitrobacter winogradskyi Nb-255 methylmalonate-semialdehyde dehydrogenase YP_318765.1 2357220 R 323098 CDS YP_318766.1 75676345 3674578 complement(2358808..2359977) 1 NC_007406.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 2359977 3674578 Nwi_2160 Nitrobacter winogradskyi Nb-255 acetyl-CoA acetyltransferase YP_318766.1 2358808 R 323098 CDS YP_318767.1 75676346 3674579 complement(2360266..2360856) 1 NC_007406.1 nuclear protein SET 2360856 3674579 Nwi_2161 Nitrobacter winogradskyi Nb-255 nuclear protein SET YP_318767.1 2360266 R 323098 CDS YP_318768.1 75676347 3674580 2361040..2362008 1 NC_007406.1 hypothetical protein 2362008 3674580 Nwi_2162 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318768.1 2361040 D 323098 CDS YP_318769.1 75676348 3674581 2362144..2362614 1 NC_007406.1 hypothetical protein 2362614 3674581 Nwi_2163 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318769.1 2362144 D 323098 CDS YP_318770.1 75676349 3674582 2362711..2363070 1 NC_007406.1 glutathione-dependent formaldehyde-activating protein 2363070 3674582 Nwi_2164 Nitrobacter winogradskyi Nb-255 glutathione-dependent formaldehyde-activating protein YP_318770.1 2362711 D 323098 CDS YP_318771.1 75676350 3677248 complement(2363329..2364267) 1 NC_007406.1 hypothetical protein 2364267 3677248 Nwi_2165 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318771.1 2363329 R 323098 CDS YP_318772.1 75676351 3677249 complement(2364396..2364791) 1 NC_007406.1 hypothetical protein 2364791 3677249 Nwi_2166 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318772.1 2364396 R 323098 CDS YP_318773.1 75676352 3677250 2364911..2366218 1 NC_007406.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 2366218 3677250 Nwi_2167 Nitrobacter winogradskyi Nb-255 adenylosuccinate lyase YP_318773.1 2364911 D 323098 CDS YP_318774.1 75676353 3677251 2366359..2367003 1 NC_007406.1 hypothetical protein 2367003 3677251 Nwi_2168 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318774.1 2366359 D 323098 CDS YP_318775.1 75676354 3677252 2367111..2368538 1 NC_007406.1 phosphate-selective porin O and P 2368538 3677252 Nwi_2169 Nitrobacter winogradskyi Nb-255 phosphate-selective porin O and P YP_318775.1 2367111 D 323098 CDS YP_318776.1 75676355 3677253 2369035..2369655 1 NC_007406.1 transglutaminase-like cysteine peptidase, BTLCP 2369655 3677253 Nwi_2170 Nitrobacter winogradskyi Nb-255 transglutaminase-like cysteine peptidase, BTLCP YP_318776.1 2369035 D 323098 CDS YP_318777.1 75676356 3677254 complement(2370063..2370527) 1 NC_007406.1 peptidylprolyl isomerase, FKBP-type 2370527 3677254 Nwi_2171 Nitrobacter winogradskyi Nb-255 peptidylprolyl isomerase, FKBP-type YP_318777.1 2370063 R 323098 CDS YP_318778.1 75676357 3677255 complement(2370627..2371157) 1 NC_007406.1 carbonic anhydrase 2371157 3677255 Nwi_2172 Nitrobacter winogradskyi Nb-255 carbonic anhydrase YP_318778.1 2370627 R 323098 CDS YP_318779.1 75676358 3677256 complement(2371213..2371542) 1 NC_007406.1 hypothetical protein 2371542 3677256 Nwi_2173 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318779.1 2371213 R 323098 CDS YP_318780.1 75676359 3677257 2371745..2372461 1 NC_007406.1 hypothetical protein 2372461 3677257 Nwi_2174 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318780.1 2371745 D 323098 CDS YP_318781.1 75676360 3677258 complement(2372472..2372690) 1 NC_007406.1 hypothetical protein 2372690 3677258 Nwi_2175 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318781.1 2372472 R 323098 CDS YP_318782.1 75676361 3677259 complement(2372790..2373620) 1 NC_007406.1 serine O-acetyltransferase 2373620 3677259 Nwi_2176 Nitrobacter winogradskyi Nb-255 serine O-acetyltransferase YP_318782.1 2372790 R 323098 CDS YP_318783.1 75676362 3677260 2373772..2375244 1 NC_007406.1 hypothetical protein 2375244 3677260 Nwi_2177 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318783.1 2373772 D 323098 CDS YP_318784.1 75676363 3677261 complement(2375202..2375954) 1 NC_007406.1 alpha/beta hydrolase 2375954 3677261 Nwi_2178 Nitrobacter winogradskyi Nb-255 alpha/beta hydrolase YP_318784.1 2375202 R 323098 CDS YP_318785.1 75676364 3677262 complement(2376010..2376495) 1 NC_007406.1 hypothetical protein 2376495 3677262 Nwi_2179 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318785.1 2376010 R 323098 CDS YP_318786.1 75676365 3677263 complement(2376081..2377181) 1 NC_007406.1 hypothetical protein 2377181 3677263 Nwi_2180 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318786.1 2376081 R 323098 CDS YP_318787.1 75676366 3677264 2377527..2377772 1 NC_007406.1 hypothetical protein 2377772 3677264 Nwi_2181 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318787.1 2377527 D 323098 CDS YP_318788.1 75676367 3677265 2377745..2378983 1 NC_007406.1 FAD-binding monooxygenase 2378983 3677265 Nwi_2182 Nitrobacter winogradskyi Nb-255 FAD-binding monooxygenase YP_318788.1 2377745 D 323098 CDS YP_318789.1 75676368 3677266 complement(2379034..2379423) 1 NC_007406.1 hypothetical protein 2379423 3677266 Nwi_2183 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318789.1 2379034 R 323098 CDS YP_318790.1 75676369 3675273 complement(2379510..2380781) 1 NC_007406.1 peptidase M29, aminopeptidase II 2380781 3675273 Nwi_2184 Nitrobacter winogradskyi Nb-255 peptidase M29, aminopeptidase II YP_318790.1 2379510 R 323098 CDS YP_318791.1 75676370 3675274 complement(2380927..2381109) 1 NC_007406.1 hypothetical protein 2381109 3675274 Nwi_2185 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318791.1 2380927 R 323098 CDS YP_318792.1 75676371 3675276 2381426..2381824 1 NC_007406.1 hypothetical protein 2381824 3675276 Nwi_2186 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318792.1 2381426 D 323098 CDS YP_318793.1 75676372 3675277 complement(2381840..2382445) 1 NC_007406.1 DSBA oxidoreductase 2382445 3675277 Nwi_2187 Nitrobacter winogradskyi Nb-255 DSBA oxidoreductase YP_318793.1 2381840 R 323098 CDS YP_318794.1 75676373 3675278 complement(2382689..2383195) 1 NC_007406.1 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 2383195 3675278 Nwi_2188 Nitrobacter winogradskyi Nb-255 xanthine-guanine phosphoribosyltransferase YP_318794.1 2382689 R 323098 CDS YP_318795.1 75676374 3675279 complement(2383295..2384035) 1 NC_007406.1 molybdopterin-biosynthesis enzyme MoeA 2384035 3675279 Nwi_2189 Nitrobacter winogradskyi Nb-255 molybdopterin-biosynthesis enzyme MoeA YP_318795.1 2383295 R 323098 CDS YP_318796.1 75676375 3675280 complement(2384208..2384507) 1 NC_007406.1 hypothetical protein 2384507 3675280 Nwi_2190 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318796.1 2384208 R 323098 CDS YP_318797.1 75676376 3675281 2384930..2385247 1 NC_007406.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 2385247 groES 3675281 groES Nitrobacter winogradskyi Nb-255 co-chaperonin GroES YP_318797.1 2384930 D 323098 CDS YP_318798.1 75676377 3675282 2385288..2386925 1 NC_007406.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is co-regulated with symbiotic nitrogen fixation genes; molecular chaperone GroEL 2386925 groEL 3675282 groEL Nitrobacter winogradskyi Nb-255 molecular chaperone GroEL YP_318798.1 2385288 D 323098 CDS YP_318799.1 75676378 3675283 complement(2387351..2387575) 1 NC_007406.1 hypothetical protein 2387575 3675283 Nwi_2193 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318799.1 2387351 R 323098 CDS YP_318800.1 75676379 3675284 complement(2387807..2389303) 1 NC_007406.1 hypothetical protein 2389303 3675284 Nwi_2194 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318800.1 2387807 R 323098 CDS YP_318801.1 75676380 3675285 complement(2389311..2390441) 1 NC_007406.1 glycosyl transferase 2390441 3675285 Nwi_2195 Nitrobacter winogradskyi Nb-255 glycosyl transferase YP_318801.1 2389311 R 323098 CDS YP_318802.1 75676381 3675286 2390732..2391535 1 NC_007406.1 hypothetical protein 2391535 3675286 Nwi_2196 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318802.1 2390732 D 323098 CDS YP_318803.1 75676382 3675287 2391547..2392008 1 NC_007406.1 hypothetical protein 2392008 3675287 Nwi_2197 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318803.1 2391547 D 323098 CDS YP_318804.1 75676383 3675288 2392133..2392879 1 NC_007406.1 hypothetical protein 2392879 3675288 Nwi_2198 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318804.1 2392133 D 323098 CDS YP_318805.1 75676384 3675289 complement(2392911..2394515) 1 NC_007406.1 molybdopterin binding protein 2394515 3675289 Nwi_2199 Nitrobacter winogradskyi Nb-255 molybdopterin binding protein YP_318805.1 2392911 R 323098 CDS YP_318806.1 75676385 3675290 complement(2394512..2395204) 1 NC_007406.1 hypothetical protein 2395204 3675290 Nwi_2200 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318806.1 2394512 R 323098 CDS YP_318807.1 75676386 3676869 complement(2395248..2395571) 1 NC_007406.1 hypothetical protein 2395571 3676869 Nwi_2201 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318807.1 2395248 R 323098 CDS YP_318808.1 75676387 3676870 complement(2395555..2396781) 1 NC_007406.1 von Willebrand factor A 2396781 3676870 Nwi_2202 Nitrobacter winogradskyi Nb-255 von Willebrand factor A YP_318808.1 2395555 R 323098 CDS YP_318809.1 75676388 3676871 complement(2396794..2397738) 1 NC_007406.1 ATPase AAA 2397738 3676871 Nwi_2203 Nitrobacter winogradskyi Nb-255 ATPase AAA YP_318809.1 2396794 R 323098 CDS YP_318810.1 75676389 3676872 complement(2397740..2398546) 1 NC_007406.1 molybdopterin dehydrogenase 2398546 3676872 Nwi_2204 Nitrobacter winogradskyi Nb-255 molybdopterin dehydrogenase YP_318810.1 2397740 R 323098 CDS YP_318811.1 75676390 3676873 complement(2398592..2399077) 1 NC_007406.1 aerobic carbon monoxide dehydrogenase 2399077 3676873 Nwi_2205 Nitrobacter winogradskyi Nb-255 aerobic carbon monoxide dehydrogenase YP_318811.1 2398592 R 323098 CDS YP_318812.1 75676391 3676874 complement(2399205..2399651) 1 NC_007406.1 carbon monoxide dehydrogenase subunit G 2399651 3676874 Nwi_2206 Nitrobacter winogradskyi Nb-255 carbon monoxide dehydrogenase subunit G YP_318812.1 2399205 R 323098 CDS YP_318813.1 75676392 3676875 2399789..2400571 1 NC_007406.1 alpha/beta hydrolase 2400571 3676875 Nwi_2207 Nitrobacter winogradskyi Nb-255 alpha/beta hydrolase YP_318813.1 2399789 D 323098 CDS YP_318814.1 75676393 3676876 complement(2400730..2401254) 1 NC_007406.1 hypothetical protein 2401254 3676876 Nwi_2208 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318814.1 2400730 R 323098 CDS YP_318815.1 75676394 3676877 2401671..2402585 1 NC_007406.1 branched chain amino acid ABC transporter permease 2402585 3676877 Nwi_2209 Nitrobacter winogradskyi Nb-255 branched chain amino acid ABC transporter permease YP_318815.1 2401671 D 323098 CDS YP_318816.1 75676395 3676878 2402611..2403981 1 NC_007406.1 branched-chain amino acid ABC transporter permease 2403981 3676878 Nwi_2210 Nitrobacter winogradskyi Nb-255 branched-chain amino acid ABC transporter permease YP_318816.1 2402611 D 323098 CDS YP_318817.1 75676396 3676879 2403978..2404814 1 NC_007406.1 ABC transporter ATPase 2404814 3676879 Nwi_2211 Nitrobacter winogradskyi Nb-255 ABC transporter ATPase YP_318817.1 2403978 D 323098 CDS YP_318818.1 75676397 3676880 2404811..2405554 1 NC_007406.1 ABC transporter ATPase 2405554 3676880 Nwi_2212 Nitrobacter winogradskyi Nb-255 ABC transporter ATPase YP_318818.1 2404811 D 323098 CDS YP_318819.1 75676398 3676881 2405842..2406957 1 NC_007406.1 extracellular ligand-binding receptor 2406957 3676881 Nwi_2213 Nitrobacter winogradskyi Nb-255 extracellular ligand-binding receptor YP_318819.1 2405842 D 323098 CDS YP_318820.1 75676399 3676882 complement(2407053..2407787) 1 NC_007406.1 cytochrome c biogenesis protein, transmembrane region 2407787 3676882 Nwi_2214 Nitrobacter winogradskyi Nb-255 cytochrome c biogenesis protein, transmembrane region YP_318820.1 2407053 R 323098 CDS YP_318821.1 75676400 3676883 2407938..2408936 1 NC_007406.1 peptidase S58, DmpA 2408936 3676883 Nwi_2215 Nitrobacter winogradskyi Nb-255 peptidase S58, DmpA YP_318821.1 2407938 D 323098 CDS YP_318822.1 75676401 3676884 2409121..2409378 1 NC_007406.1 hypothetical protein 2409378 3676884 Nwi_2216 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318822.1 2409121 D 323098 CDS YP_318823.1 75676402 3676885 complement(2409482..2410684) 1 NC_007406.1 hypothetical protein 2410684 3676885 Nwi_2217 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318823.1 2409482 R 323098 CDS YP_318824.1 75676403 3676416 2410903..2411604 1 NC_007406.1 ribulose-phosphate 3-epimerase 2411604 3676416 Nwi_2218 Nitrobacter winogradskyi Nb-255 ribulose-phosphate 3-epimerase YP_318824.1 2410903 D 323098 CDS YP_318825.1 75676404 3676417 2412121..2414199 1 NC_007406.1 TonB-dependent receptor 2414199 3676417 Nwi_2219 Nitrobacter winogradskyi Nb-255 TonB-dependent receptor YP_318825.1 2412121 D 323098 CDS YP_318826.1 75676405 3676418 complement(2414385..2414966) 1 NC_007406.1 hypothetical protein 2414966 3676418 Nwi_2220 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318826.1 2414385 R 323098 CDS YP_318827.1 75676406 3677187 complement(2414989..2416806) 1 NC_007406.1 Signal transduction histidine kinase 2416806 3677187 Nwi_2221 Nitrobacter winogradskyi Nb-255 Signal transduction histidine kinase YP_318827.1 2414989 R 323098 CDS YP_318828.1 75676407 3677188 2417238..2417654 1 NC_007406.1 hypothetical protein 2417654 3677188 Nwi_2222 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318828.1 2417238 D 323098 CDS YP_318829.1 75676408 3677189 2417730..2418158 1 NC_007406.1 Fe-S metabolism associated SufE 2418158 3677189 Nwi_2223 Nitrobacter winogradskyi Nb-255 Fe-S metabolism associated SufE YP_318829.1 2417730 D 323098 CDS YP_318830.1 75676409 3677190 2418437..2418802 1 NC_007406.1 ISBm1, transposase orfA 2418802 3677190 Nwi_2224 Nitrobacter winogradskyi Nb-255 ISBm1, transposase orfA YP_318830.1 2418437 D 323098 CDS YP_318831.1 75676410 3677191 2419264..2420214 1 NC_007406.1 integrase, catalytic region 2420214 3677191 Nwi_2225 Nitrobacter winogradskyi Nb-255 integrase, catalytic region YP_318831.1 2419264 D 323098 CDS YP_318832.1 75676411 3677192 complement(2420242..2421234) 1 NC_007406.1 DNA replication initiation ATPase 2421234 3677192 Nwi_2226 Nitrobacter winogradskyi Nb-255 DNA replication initiation ATPase YP_318832.1 2420242 R 323098 CDS YP_318833.1 75676412 3677193 complement(2421381..2421794) 1 NC_007406.1 ROSMUCR transcriptional regulator 2421794 3677193 Nwi_2227 Nitrobacter winogradskyi Nb-255 ROSMUCR transcriptional regulator YP_318833.1 2421381 R 323098 CDS YP_318834.1 75676413 3677194 complement(2421929..2422753) 1 NC_007406.1 hypothetical protein 2422753 3677194 Nwi_2228 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318834.1 2421929 R 323098 CDS YP_318835.1 75676414 3677195 complement(2423148..2424554) 1 NC_007406.1 hypothetical protein 2424554 3677195 Nwi_2229 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318835.1 2423148 R 323098 CDS YP_318836.1 75676415 3677196 complement(2424589..2425881) 1 NC_007406.1 hypothetical protein 2425881 3677196 Nwi_2230 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318836.1 2424589 R 323098 CDS YP_318837.1 75676416 3677197 complement(2426011..2427576) 1 NC_007406.1 hypothetical protein 2427576 3677197 Nwi_2231 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318837.1 2426011 R 323098 CDS YP_318838.1 75676417 3674177 2428157..2428564 1 NC_007406.1 hypothetical protein 2428564 3674177 Nwi_2232 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318838.1 2428157 D 323098 CDS YP_318839.1 75676418 3674178 2428648..2429526 1 NC_007406.1 dihydropteroate synthase 2429526 3674178 Nwi_2233 Nitrobacter winogradskyi Nb-255 dihydropteroate synthase YP_318839.1 2428648 D 323098 CDS YP_318840.1 75676419 3674179 2429523..2429888 1 NC_007406.1 dihydroneopterin aldolase 2429888 3674179 Nwi_2234 Nitrobacter winogradskyi Nb-255 dihydroneopterin aldolase YP_318840.1 2429523 D 323098 CDS YP_318841.1 75676420 3674180 2429897..2430388 1 NC_007406.1 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 2430388 3674180 Nwi_2235 Nitrobacter winogradskyi Nb-255 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase YP_318841.1 2429897 D 323098 CDS YP_318842.1 75676421 3674181 2430469..2432388 1 NC_007406.1 methylmalonyl-CoA mutase 2432388 3674181 Nwi_2236 Nitrobacter winogradskyi Nb-255 methylmalonyl-CoA mutase YP_318842.1 2430469 D 323098 CDS YP_318843.1 75676422 3674182 2432385..2432849 1 NC_007406.1 glutathione-dependent formaldehyde-activating protein 2432849 3674182 Nwi_2237 Nitrobacter winogradskyi Nb-255 glutathione-dependent formaldehyde-activating protein YP_318843.1 2432385 D 323098 CDS YP_318844.1 75676423 3674183 2432853..2435021 1 NC_007406.1 MDM; functions in conversion of succinate to propionate; methylmalonyl-CoA mutase 2435021 3674183 Nwi_2238 Nitrobacter winogradskyi Nb-255 methylmalonyl-CoA mutase YP_318844.1 2432853 D 323098 CDS YP_318845.1 75676424 3674184 2435185..2435997 1 NC_007406.1 hypothetical protein 2435997 3674184 Nwi_2239 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318845.1 2435185 D 323098 CDS YP_318846.1 75676425 3677129 2435994..2436974 1 NC_007406.1 functions in transport of arginine/ornithine; inner membrane ATPase that cleaves ATP and phosphorylates two periplasmic proteins that function as two distinct transport systems, the AO (arginine and ornithine) and LAO (lysine, arginine, and ornithine) periplasmic binding proteins; arginine/ornithine transport system ATPase 2436974 3677129 Nwi_2240 Nitrobacter winogradskyi Nb-255 arginine/ornithine transport system ATPase YP_318846.1 2435994 D 323098 CDS YP_318847.1 75676426 3677130 2437120..2437761 1 NC_007406.1 peptidase C15, pyroglutamyl peptidase I 2437761 3677130 Nwi_2241 Nitrobacter winogradskyi Nb-255 peptidase C15, pyroglutamyl peptidase I YP_318847.1 2437120 D 323098 CDS YP_318848.1 75676427 3677131 2438008..2439300 1 NC_007406.1 Bcr/CflA subfamily drug resistance transporter 2439300 3677131 Nwi_2242 Nitrobacter winogradskyi Nb-255 Bcr/CflA subfamily drug resistance transporter YP_318848.1 2438008 D 323098 CDS YP_318849.1 75676428 3677132 2439403..2440770 1 NC_007406.1 nitrous oxidase accessory protein 2440770 3677132 Nwi_2243 Nitrobacter winogradskyi Nb-255 nitrous oxidase accessory protein YP_318849.1 2439403 D 323098 CDS YP_318850.1 75676429 3677133 complement(2440934..2441428) 1 NC_007406.1 hypothetical protein 2441428 3677133 Nwi_2244 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318850.1 2440934 R 323098 CDS YP_318851.1 75676430 3677134 complement(2441839..2442042) 1 NC_007406.1 CsbD-like protein 2442042 3677134 Nwi_2245 Nitrobacter winogradskyi Nb-255 CsbD-like protein YP_318851.1 2441839 R 323098 CDS YP_318852.1 75676431 3677135 complement(2442826..2444709) 1 NC_007406.1 peptidase S8/S53 subtilisin kexin sedolisin 2444709 3677135 Nwi_2246 Nitrobacter winogradskyi Nb-255 peptidase S8/S53 subtilisin kexin sedolisin YP_318852.1 2442826 R 323098 CDS YP_318853.1 75676432 3677136 complement(2444787..2445479) 1 NC_007406.1 hypothetical protein 2445479 3677136 Nwi_2247 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318853.1 2444787 R 323098 CDS YP_318854.1 75676433 3677137 complement(2445476..2446045) 1 NC_007406.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 2446045 3677137 Nwi_2248 Nitrobacter winogradskyi Nb-255 RNA polymerase sigma factor YP_318854.1 2445476 R 323098 CDS YP_318855.1 75676434 3677138 complement(2446514..2446759) 1 NC_007406.1 hypothetical protein 2446759 3677138 Nwi_2249 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318855.1 2446514 R 323098 CDS YP_318856.1 75676435 3677139 2446874..2447680 1 NC_007406.1 hypothetical protein 2447680 3677139 Nwi_2250 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318856.1 2446874 D 323098 CDS YP_318857.1 75676436 3677140 2447786..2448508 1 NC_007406.1 hypothetical protein 2448508 3677140 Nwi_2251 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318857.1 2447786 D 323098 CDS YP_318858.1 75676437 3677141 2448842..2449621 1 NC_007406.1 enoyl-CoA hydratase 2449621 3677141 Nwi_2252 Nitrobacter winogradskyi Nb-255 enoyl-CoA hydratase YP_318858.1 2448842 D 323098 CDS YP_318859.1 75676438 3677142 complement(2449667..2451514) 1 NC_007406.1 hypothetical protein 2451514 3677142 Nwi_2253 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318859.1 2449667 R 323098 CDS YP_318860.1 75676439 3677143 complement(2451710..2452957) 1 NC_007406.1 catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase 2452957 3677143 Nwi_2254 Nitrobacter winogradskyi Nb-255 threonine dehydratase YP_318860.1 2451710 R 323098 CDS YP_318861.1 75676440 3677144 complement(2453061..2456588) 1 NC_007406.1 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis. It is not the major replicative DNA polymerase.; error-prone DNA polymerase 2456588 dnaE2 3677144 dnaE2 Nitrobacter winogradskyi Nb-255 error-prone DNA polymerase YP_318861.1 2453061 R 323098 CDS YP_318862.1 75676441 3677145 complement(2456585..2458090) 1 NC_007406.1 hypothetical protein 2458090 3677145 Nwi_2256 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318862.1 2456585 R 323098 CDS YP_318863.1 75676442 3677146 complement(2458131..2458943) 1 NC_007406.1 hypothetical protein 2458943 3677146 Nwi_2257 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318863.1 2458131 R 323098 CDS YP_318864.1 75676443 3677147 2459113..2460357 1 NC_007406.1 elongator protein 3/MiaB/NifB 2460357 3677147 Nwi_2258 Nitrobacter winogradskyi Nb-255 elongator protein 3/MiaB/NifB YP_318864.1 2459113 D 323098 CDS YP_318865.1 75676444 3677148 2460354..2461097 1 NC_007406.1 phage SPO1 DNA polymerase-related protein 2461097 3677148 Nwi_2259 Nitrobacter winogradskyi Nb-255 phage SPO1 DNA polymerase-related protein YP_318865.1 2460354 D 323098 CDS YP_318866.1 75676445 3675165 2461390..2462106 1 NC_007406.1 ISRm2011-2 transposase 2462106 3675165 Nwi_2260 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_318866.1 2461390 D 323098 CDS YP_318867.1 75676446 3675166 2462166..2462843 1 NC_007406.1 phage SPO1 DNA polymerase-related protein 2462843 3675166 Nwi_2261 Nitrobacter winogradskyi Nb-255 phage SPO1 DNA polymerase-related protein YP_318867.1 2462166 D 323098 CDS YP_318868.1 75676447 3675167 complement(2462884..2464053) 1 NC_007406.1 peptidase M20D, amidohydrolase 2464053 3675167 Nwi_2262 Nitrobacter winogradskyi Nb-255 peptidase M20D, amidohydrolase YP_318868.1 2462884 R 323098 CDS YP_318869.1 75676448 3675168 complement(2464130..2465521) 1 NC_007406.1 class III aminotransferase 2465521 3675168 Nwi_2263 Nitrobacter winogradskyi Nb-255 class III aminotransferase YP_318869.1 2464130 R 323098 CDS YP_318870.1 75676449 3675169 2465631..2466272 1 NC_007406.1 hypothetical protein 2466272 3675169 Nwi_2264 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318870.1 2465631 D 323098 CDS YP_318871.1 75676450 3675170 complement(2466240..2468903) 1 NC_007406.1 hypothetical protein 2468903 3675170 Nwi_2265 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318871.1 2466240 R 323098 CDS YP_318872.1 75676451 3675171 2469319..2470263 1 NC_007406.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2470263 ispH 3675171 ispH Nitrobacter winogradskyi Nb-255 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_318872.1 2469319 D 323098 CDS YP_318873.1 75676452 3675172 2470310..2471479 1 NC_007406.1 Fe-S oxidoreductase 2471479 3675172 Nwi_2267 Nitrobacter winogradskyi Nb-255 Fe-S oxidoreductase YP_318873.1 2470310 D 323098 CDS YP_318874.1 75676453 3675173 complement(2472000..2472830) 1 NC_007406.1 hypothetical protein 2472830 3675173 Nwi_2268 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318874.1 2472000 R 323098 CDS YP_318875.1 75676454 3675174 complement(2472851..2474815) 1 NC_007406.1 terpene synthase/squalene cyclase 2474815 3675174 Nwi_2269 Nitrobacter winogradskyi Nb-255 terpene synthase/squalene cyclase YP_318875.1 2472851 R 323098 CDS YP_318876.1 75676455 3675175 complement(2474829..2476082) 1 NC_007406.1 amine oxidase 2476082 3675175 Nwi_2270 Nitrobacter winogradskyi Nb-255 amine oxidase YP_318876.1 2474829 R 323098 CDS YP_318877.1 75676456 3675176 complement(2476082..2476918) 1 NC_007406.1 squalene/phytoene synthase 2476918 3675176 Nwi_2271 Nitrobacter winogradskyi Nb-255 squalene/phytoene synthase YP_318877.1 2476082 R 323098 CDS YP_318878.1 75676457 3675177 complement(2476915..2477793) 1 NC_007406.1 squalene/phytoene synthase 2477793 3675177 Nwi_2272 Nitrobacter winogradskyi Nb-255 squalene/phytoene synthase YP_318878.1 2476915 R 323098 CDS YP_318879.1 75676458 3675178 complement(2477987..2478244) 1 NC_007406.1 hypothetical protein 2478244 3675178 Nwi_2273 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318879.1 2477987 R 323098 CDS YP_318880.1 75676459 3675179 2478790..2479290 1 NC_007406.1 hypothetical protein 2479290 3675179 Nwi_2274 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318880.1 2478790 D 323098 CDS YP_318881.1 75676460 3675180 complement(2479332..2481725) 1 NC_007406.1 RND superfamily transporter 2481725 3675180 Nwi_2275 Nitrobacter winogradskyi Nb-255 RND superfamily transporter YP_318881.1 2479332 R 323098 CDS YP_318882.1 75676461 3675181 complement(2482067..2483728) 1 NC_007406.1 Fe-S oxidoreductase 2483728 3675181 Nwi_2276 Nitrobacter winogradskyi Nb-255 Fe-S oxidoreductase YP_318882.1 2482067 R 323098 CDS YP_318883.1 75676462 3675182 complement(2484111..2485460) 1 NC_007406.1 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 2485460 3675182 Nwi_2277 Nitrobacter winogradskyi Nb-255 amidase YP_318883.1 2484111 R 323098 CDS YP_318884.1 75676463 3675183 complement(2485555..2488341) 1 NC_007406.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 2488341 3675183 Nwi_2278 Nitrobacter winogradskyi Nb-255 phosphoenolpyruvate carboxylase YP_318884.1 2485555 R 323098 CDS YP_318885.1 75676464 3675727 2488894..2490090 1 NC_007406.1 cytochrome P450 2490090 3675727 Nwi_2279 Nitrobacter winogradskyi Nb-255 cytochrome P450 YP_318885.1 2488894 D 323098 CDS YP_318886.1 75676465 3675728 2490127..2491347 1 NC_007406.1 OsmC-like protein 2491347 3675728 Nwi_2280 Nitrobacter winogradskyi Nb-255 OsmC-like protein YP_318886.1 2490127 D 323098 CDS YP_318887.1 75676466 3675729 complement(2491412..2491663) 1 NC_007406.1 hypothetical protein 2491663 3675729 Nwi_2281 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318887.1 2491412 R 323098 CDS YP_318888.1 75676467 3675730 complement(2491756..2493009) 1 NC_007406.1 FAD dependent oxidoreductase 2493009 3675730 Nwi_2282 Nitrobacter winogradskyi Nb-255 FAD dependent oxidoreductase YP_318888.1 2491756 R 323098 CDS YP_318889.1 75676468 3675731 complement(2493245..2496340) 1 NC_007406.1 acriflavin resistance protein 2496340 3675731 Nwi_2283 Nitrobacter winogradskyi Nb-255 acriflavin resistance protein YP_318889.1 2493245 R 323098 CDS YP_318890.1 75676469 3675732 complement(2496543..2497754) 1 NC_007406.1 secretion protein HlyD 2497754 3675732 Nwi_2284 Nitrobacter winogradskyi Nb-255 secretion protein HlyD YP_318890.1 2496543 R 323098 CDS YP_318891.1 75676470 3675733 complement(2497756..2498457) 1 NC_007406.1 TetR family transcriptional regulator 2498457 3675733 Nwi_2285 Nitrobacter winogradskyi Nb-255 TetR family transcriptional regulator YP_318891.1 2497756 R 323098 CDS YP_318892.1 75676471 3675734 complement(2498592..2499851) 1 NC_007406.1 Glu/Leu/Phe/Val dehydrogenase 2499851 3675734 Nwi_2286 Nitrobacter winogradskyi Nb-255 Glu/Leu/Phe/Val dehydrogenase YP_318892.1 2498592 R 323098 CDS YP_318893.1 75676472 3675735 complement(2500129..2501349) 1 NC_007406.1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase 2501349 3675735 Nwi_2287 Nitrobacter winogradskyi Nb-255 FAD-dependent pyridine nucleotide-disulfide oxidoreductase YP_318893.1 2500129 R 323098 CDS YP_318894.1 75676473 3675736 2501580..2502854 1 NC_007406.1 beta-lactamase 2502854 3675736 Nwi_2288 Nitrobacter winogradskyi Nb-255 beta-lactamase YP_318894.1 2501580 D 323098 CDS YP_318895.1 75676474 3675737 complement(2502904..2503785) 1 NC_007406.1 HpcH/HpaI aldolase 2503785 3675737 Nwi_2289 Nitrobacter winogradskyi Nb-255 HpcH/HpaI aldolase YP_318895.1 2502904 R 323098 CDS YP_318896.1 75676475 3675738 complement(2503782..2504234) 1 NC_007406.1 acyl dehydratase MaoC 2504234 3675738 Nwi_2290 Nitrobacter winogradskyi Nb-255 acyl dehydratase MaoC YP_318896.1 2503782 R 323098 CDS YP_318897.1 75676476 3675739 2504641..2505000 1 NC_007406.1 hypothetical protein 2505000 3675739 Nwi_2291 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318897.1 2504641 D 323098 CDS YP_318898.1 75676477 3675740 complement(2505053..2505538) 1 NC_007406.1 hypothetical protein 2505538 3675740 Nwi_2292 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318898.1 2505053 R 323098 CDS YP_318899.1 75676478 3675741 complement(2506169..2506471) 1 NC_007406.1 hypothetical protein 2506471 3675741 Nwi_2293 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318899.1 2506169 R 323098 CDS YP_318900.1 75676479 3675742 complement(2506682..2509003) 1 NC_007406.1 TonB-dependent siderophore receptor 2509003 3675742 Nwi_2294 Nitrobacter winogradskyi Nb-255 TonB-dependent siderophore receptor YP_318900.1 2506682 R 323098 CDS YP_318901.1 75676480 3675743 complement(2509115..2509642) 1 NC_007406.1 N-acetyltransferase 2509642 3675743 Nwi_2295 Nitrobacter winogradskyi Nb-255 N-acetyltransferase YP_318901.1 2509115 R 323098 CDS YP_318902.1 75676481 3675744 complement(2509750..2512008) 1 NC_007406.1 TonB-dependent receptor 2512008 3675744 Nwi_2296 Nitrobacter winogradskyi Nb-255 TonB-dependent receptor YP_318902.1 2509750 R 323098 CDS YP_318903.1 75676482 3675745 complement(2512116..2513099) 1 NC_007406.1 FecR protein 2513099 3675745 Nwi_2297 Nitrobacter winogradskyi Nb-255 FecR protein YP_318903.1 2512116 R 323098 CDS YP_318904.1 75676483 3675746 complement(2513821..2514711) 1 NC_007406.1 xylose isomerase-like TIM barrel 2514711 3675746 Nwi_2298 Nitrobacter winogradskyi Nb-255 xylose isomerase-like TIM barrel YP_318904.1 2513821 R 323098 CDS YP_318905.1 75676484 3675923 complement(2514690..2516000) 1 NC_007406.1 hypothetical protein 2516000 3675923 Nwi_2299 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318905.1 2514690 R 323098 CDS YP_318906.1 75676485 3675924 complement(2515997..2517268) 1 NC_007406.1 activates fatty acids by binding to coenzyme A; acyl-CoA synthetase 2517268 3675924 Nwi_2300 Nitrobacter winogradskyi Nb-255 acyl-CoA synthetase YP_318906.1 2515997 R 323098 CDS YP_318907.1 75676486 3675925 complement(2517265..2518953) 1 NC_007406.1 siderophore synthetase component 2518953 3675925 Nwi_2301 Nitrobacter winogradskyi Nb-255 siderophore synthetase component YP_318907.1 2517265 R 323098 CDS YP_318908.1 75676487 3675926 complement(2518982..2520811) 1 NC_007406.1 siderophore synthetase component 2520811 3675926 Nwi_2302 Nitrobacter winogradskyi Nb-255 siderophore synthetase component YP_318908.1 2518982 R 323098 CDS YP_318909.1 75676488 3675927 2521034..2521534 1 NC_007406.1 fec I like protein 2521534 3675927 Nwi_2303 Nitrobacter winogradskyi Nb-255 fec I like protein YP_318909.1 2521034 D 323098 CDS YP_318910.1 75676489 3675928 complement(2521277..2522074) 1 NC_007406.1 hypothetical protein 2522074 3675928 Nwi_2304 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318910.1 2521277 R 323098 CDS YP_318911.1 75676490 3675929 2522735..2523697 1 NC_007406.1 MotA/TolQ/ExbB proton channel 2523697 3675929 Nwi_2305 Nitrobacter winogradskyi Nb-255 MotA/TolQ/ExbB proton channel YP_318911.1 2522735 D 323098 CDS YP_318912.1 75676491 3675930 2523702..2524172 1 NC_007406.1 biopolymer transport protein ExbD/TolR 2524172 3675930 Nwi_2306 Nitrobacter winogradskyi Nb-255 biopolymer transport protein ExbD/TolR YP_318912.1 2523702 D 323098 CDS YP_318913.1 75676492 3675931 2524174..2524965 1 NC_007406.1 TonB-like protein 2524965 3675931 Nwi_2307 Nitrobacter winogradskyi Nb-255 TonB-like protein YP_318913.1 2524174 D 323098 CDS YP_318914.1 75676493 3675932 complement(2525226..2525579) 1 NC_007406.1 hypothetical protein 2525579 3675932 Nwi_2308 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318914.1 2525226 R 323098 CDS YP_318915.1 75676494 3675933 complement(2526016..2527869) 1 NC_007406.1 glycoside hydrolase 15-related 2527869 3675933 Nwi_2309 Nitrobacter winogradskyi Nb-255 glycoside hydrolase 15-related YP_318915.1 2526016 R 323098 CDS YP_318916.1 75676495 3675934 complement(2527984..2529099) 1 NC_007406.1 short chain dehydrogenase 2529099 3675934 Nwi_2310 Nitrobacter winogradskyi Nb-255 short chain dehydrogenase YP_318916.1 2527984 R 323098 CDS YP_318917.1 75676496 3675935 2529273..2530037 1 NC_007406.1 hypothetical protein 2530037 3675935 Nwi_2311 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318917.1 2529273 D 323098 CDS YP_318918.1 75676497 3675936 2530034..2530552 1 NC_007406.1 hypothetical protein 2530552 3675936 Nwi_2312 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318918.1 2530034 D 323098 CDS YP_318919.1 75676498 3675937 2530525..2531259 1 NC_007406.1 cytochrome c oxidase, subunit II 2531259 3675937 Nwi_2313 Nitrobacter winogradskyi Nb-255 cytochrome c oxidase, subunit II YP_318919.1 2530525 D 323098 CDS YP_318920.1 75676499 3675938 2531256..2533775 1 NC_007406.1 cytochrome c oxidase subunit I 2533775 3675938 Nwi_2314 Nitrobacter winogradskyi Nb-255 cytochrome c oxidase subunit I YP_318920.1 2531256 D 323098 CDS YP_318921.1 75676500 3675939 2533772..2534134 1 NC_007406.1 hypothetical protein 2534134 3675939 Nwi_2315 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318921.1 2533772 D 323098 CDS YP_318922.1 75676501 3675940 complement(2534146..2534640) 1 NC_007406.1 hypothetical protein 2534640 3675940 Nwi_2316 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318922.1 2534146 R 323098 CDS YP_318923.1 75676502 3675941 2534950..2535354 1 NC_007406.1 hypothetical protein 2535354 3675941 Nwi_2317 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318923.1 2534950 D 323098 CDS YP_318924.1 75676503 3674620 2535457..2537796 1 NC_007406.1 TonB-dependent siderophore receptor 2537796 3674620 Nwi_2318 Nitrobacter winogradskyi Nb-255 TonB-dependent siderophore receptor YP_318924.1 2535457 D 323098 CDS YP_318925.1 75676504 3674621 2537868..2539253 1 NC_007406.1 propeptide, PepSY amd peptidase M4 2539253 3674621 Nwi_2319 Nitrobacter winogradskyi Nb-255 propeptide, PepSY amd peptidase M4 YP_318925.1 2537868 D 323098 CDS YP_318926.1 75676505 3674622 2539381..2539701 1 NC_007406.1 small multidrug resistance protein 2539701 3674622 Nwi_2320 Nitrobacter winogradskyi Nb-255 small multidrug resistance protein YP_318926.1 2539381 D 323098 CDS YP_318927.1 75676506 3674623 2539728..2540888 1 NC_007406.1 amidinotransferase 2540888 3674623 Nwi_2321 Nitrobacter winogradskyi Nb-255 amidinotransferase YP_318927.1 2539728 D 323098 CDS YP_318928.1 75676507 3674624 complement(2541136..2541945) 1 NC_007406.1 with HmuTU is involved in the transport of hemin; hemin importer ATP-binding subunit 2541945 hmuV 3674624 hmuV Nitrobacter winogradskyi Nb-255 hemin importer ATP-binding subunit YP_318928.1 2541136 R 323098 CDS YP_318929.1 75676508 3674625 complement(2541942..2543039) 1 NC_007406.1 ABC-type Fe3+-siderophore transport system permease component 2543039 3674625 Nwi_2323 Nitrobacter winogradskyi Nb-255 ABC-type Fe3+-siderophore transport system permease component YP_318929.1 2541942 R 323098 CDS YP_318930.1 75676509 3674626 complement(2543036..2543902) 1 NC_007406.1 periplasmic binding protein 2543902 3674626 Nwi_2324 Nitrobacter winogradskyi Nb-255 periplasmic binding protein YP_318930.1 2543036 R 323098 CDS YP_318931.1 75676510 3674627 2544237..2544572 1 NC_007406.1 antibiotic biosynthesis monooxygenase 2544572 3674627 Nwi_2325 Nitrobacter winogradskyi Nb-255 antibiotic biosynthesis monooxygenase YP_318931.1 2544237 D 323098 CDS YP_318932.1 75676511 3674628 2544610..2545140 1 NC_007406.1 hypothetical protein 2545140 3674628 Nwi_2326 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318932.1 2544610 D 323098 CDS YP_318933.1 75676512 3674629 2545486..2546730 1 NC_007406.1 hypothetical protein 2546730 3674629 Nwi_2327 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318933.1 2545486 D 323098 CDS YP_318934.1 75676513 3674630 2546915..2547187 1 NC_007406.1 hypothetical protein 2547187 3674630 Nwi_2328 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318934.1 2546915 D 323098 CDS YP_318935.1 75676514 3674631 complement(2547239..2548219) 1 NC_007406.1 Fis family transcriptional regulator 2548219 3674631 Nwi_2329 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_318935.1 2547239 R 323098 CDS YP_318936.1 75676515 3674632 complement(2548216..2548590) 1 NC_007406.1 transposase IS3/IS911 2548590 3674632 Nwi_2330 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_318936.1 2548216 R 323098 CDS YP_318937.1 75676516 3674633 2548746..2549231 1 NC_007406.1 guanosine polyphosphate pyrophosphohydrolase/synthetase 2549231 3674633 Nwi_2331 Nitrobacter winogradskyi Nb-255 guanosine polyphosphate pyrophosphohydrolase/synthetase YP_318937.1 2548746 D 323098 CDS YP_318938.1 75676517 3674634 2549498..2549872 1 NC_007406.1 transposase 2549872 3674634 Nwi_2332 Nitrobacter winogradskyi Nb-255 transposase YP_318938.1 2549498 D 323098 CDS YP_318939.1 75676518 3676381 complement(2550344..2551381) 1 NC_007406.1 hypothetical protein 2551381 3676381 Nwi_2333 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318939.1 2550344 R 323098 CDS YP_318940.1 75676519 3676382 2552474..2552800 1 NC_007406.1 hypothetical protein 2552800 3676382 Nwi_2334 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318940.1 2552474 D 323098 CDS YP_318941.1 75676520 3676383 2552803..2553270 1 NC_007406.1 hypothetical protein 2553270 3676383 Nwi_2335 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318941.1 2552803 D 323098 CDS YP_318942.1 75676521 3676384 2553267..2554865 1 NC_007406.1 resolvase 2554865 3676384 Nwi_2336 Nitrobacter winogradskyi Nb-255 resolvase YP_318942.1 2553267 D 323098 CDS YP_318943.1 75676522 3674483 complement(2555459..2556037) 1 NC_007406.1 hypothetical protein 2556037 3674483 Nwi_2337 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318943.1 2555459 R 323098 CDS YP_318944.1 75676523 3674484 complement(2556288..2557847) 1 NC_007406.1 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 2557847 3674484 Nwi_2338 Nitrobacter winogradskyi Nb-255 2-isopropylmalate synthase YP_318944.1 2556288 R 323098 CDS YP_318945.1 75676524 3674485 2558315..2559106 1 NC_007406.1 ABC transporter ATPase 2559106 3674485 Nwi_2339 Nitrobacter winogradskyi Nb-255 ABC transporter ATPase YP_318945.1 2558315 D 323098 CDS YP_318946.1 75676525 3674486 2559103..2560674 1 NC_007406.1 glycine betaine ABC transporter substrate-binding protein/inner membrane protein 2560674 3674486 Nwi_2340 Nitrobacter winogradskyi Nb-255 glycine betaine ABC transporter substrate-binding protein/inner membrane protein YP_318946.1 2559103 D 323098 CDS YP_318947.1 75676526 3674487 complement(2560955..2561974) 1 NC_007406.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 2561974 3674487 Nwi_2341 Nitrobacter winogradskyi Nb-255 ketol-acid reductoisomerase YP_318947.1 2560955 R 323098 CDS YP_318948.1 75676527 3674488 complement(2562190..2562732) 1 NC_007406.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 2562732 ilvH 3674488 ilvH Nitrobacter winogradskyi Nb-255 acetolactate synthase 3 regulatory subunit YP_318948.1 2562190 R 323098 CDS YP_318949.1 75676528 3674489 complement(2562868..2564646) 1 NC_007406.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; acetolactate synthase 3 catalytic subunit 2564646 3674489 Nwi_2343 Nitrobacter winogradskyi Nb-255 acetolactate synthase 3 catalytic subunit YP_318949.1 2562868 R 323098 CDS YP_318950.1 75676529 3674490 complement(2564960..2565904) 1 NC_007406.1 tRNA isopentenyltransferase 2565904 3674490 Nwi_2344 Nitrobacter winogradskyi Nb-255 tRNA isopentenyltransferase YP_318950.1 2564960 R 323098 CDS YP_318951.1 75676530 3674491 2565903..2566796 1 NC_007406.1 phosphoserine phosphatase SerB 2566796 3674491 Nwi_2345 Nitrobacter winogradskyi Nb-255 phosphoserine phosphatase SerB YP_318951.1 2565903 D 323098 CDS YP_318952.1 75676531 3674492 complement(2566954..2568444) 1 NC_007406.1 peptidase S1C, Do 2568444 3674492 Nwi_2346 Nitrobacter winogradskyi Nb-255 peptidase S1C, Do YP_318952.1 2566954 R 323098 CDS YP_318953.1 75676532 3674493 complement(2568962..2569162) 1 NC_007406.1 hypothetical protein 2569162 3674493 Nwi_2347 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318953.1 2568962 R 323098 CDS YP_318954.1 75676533 3674494 complement(2569420..2570316) 1 NC_007406.1 hypothetical protein 2570316 3674494 Nwi_2348 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318954.1 2569420 R 323098 CDS YP_318955.1 75676534 3674495 complement(2570313..2571461) 1 NC_007406.1 HflK protein 2571461 3674495 Nwi_2349 Nitrobacter winogradskyi Nb-255 HflK protein YP_318955.1 2570313 R 323098 CDS YP_318956.1 75676535 3674496 complement(2571619..2572155) 1 NC_007406.1 dihydrofolate reductase subunit 2572155 3674496 Nwi_2350 Nitrobacter winogradskyi Nb-255 dihydrofolate reductase subunit YP_318956.1 2571619 R 323098 CDS YP_318957.1 75676536 3674497 complement(2572152..2572946) 1 NC_007406.1 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 2572946 thyA 3674497 thyA Nitrobacter winogradskyi Nb-255 thymidylate synthase YP_318957.1 2572152 R 323098 CDS YP_318958.1 75676537 3674499 2573702..2574250 1 NC_007406.1 hypothetical protein 2574250 3674499 Nwi_2352 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318958.1 2573702 D 323098 CDS YP_318959.1 75676538 3677305 2574337..2575746 1 NC_007406.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2575746 fumC 3677305 fumC Nitrobacter winogradskyi Nb-255 fumarate hydratase YP_318959.1 2574337 D 323098 CDS YP_318960.1 75676539 3677306 2575976..2576170 1 NC_007406.1 hypothetical protein 2576170 3677306 Nwi_2354 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318960.1 2575976 D 323098 CDS YP_318961.1 75676540 3677307 2576167..2576421 1 NC_007406.1 hypothetical protein 2576421 3677307 Nwi_2355 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318961.1 2576167 D 323098 CDS YP_318962.1 75676541 3677308 2577135..2577581 1 NC_007406.1 arylsulfate sulfotransferase-like protein 2577581 3677308 Nwi_2356 Nitrobacter winogradskyi Nb-255 arylsulfate sulfotransferase-like protein YP_318962.1 2577135 D 323098 CDS YP_318963.2 162139841 3677309 2577493..2577867 1 NC_007406.1 transposase IS3/IS911 2577867 3677309 Nwi_2357 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_318963.2 2577493 D 323098 CDS YP_318964.1 75676543 3677310 2577864..2578844 1 NC_007406.1 Fis family transcriptional regulator 2578844 3677310 Nwi_2358 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_318964.1 2577864 D 323098 CDS YP_318965.1 75676544 3677311 complement(2579094..2579267) 1 NC_007406.1 hypothetical protein 2579267 3677311 Nwi_2359 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318965.1 2579094 R 323098 CDS YP_318966.1 75676545 3677312 2579538..2581988 1 NC_007406.1 UvrD/REP helicase 2581988 3677312 Nwi_2360 Nitrobacter winogradskyi Nb-255 UvrD/REP helicase YP_318966.1 2579538 D 323098 CDS YP_318967.1 75676546 3677313 2582115..2583035 1 NC_007406.1 ABC transporter ATPase 2583035 3677313 Nwi_2361 Nitrobacter winogradskyi Nb-255 ABC transporter ATPase YP_318967.1 2582115 D 323098 CDS YP_318968.1 75676547 3677314 2583037..2583798 1 NC_007406.1 ABC transporter permease 2583798 3677314 Nwi_2362 Nitrobacter winogradskyi Nb-255 ABC transporter permease YP_318968.1 2583037 D 323098 CDS YP_318969.1 75676548 3677315 complement(2583952..2584293) 1 NC_007406.1 hypothetical protein 2584293 3677315 Nwi_2363 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318969.1 2583952 R 323098 CDS YP_318970.1 75676549 3677316 2584589..2585401 1 NC_007406.1 ErfK/YbiS/YcfS/YnhG 2585401 3677316 Nwi_2364 Nitrobacter winogradskyi Nb-255 ErfK/YbiS/YcfS/YnhG YP_318970.1 2584589 D 323098 CDS YP_318971.1 75676550 3677317 2585483..2587090 1 NC_007406.1 FAD dependent oxidoreductase 2587090 3677317 Nwi_2365 Nitrobacter winogradskyi Nb-255 FAD dependent oxidoreductase YP_318971.1 2585483 D 323098 CDS YP_318972.1 75676551 3677318 2587441..2587710 1 NC_007406.1 hypothetical protein 2587710 3677318 Nwi_2366 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318972.1 2587441 D 323098 CDS YP_318973.1 75676552 3677319 2587694..2588659 1 NC_007406.1 ribosomal L11 methyltransferase 2588659 3677319 Nwi_2367 Nitrobacter winogradskyi Nb-255 ribosomal L11 methyltransferase YP_318973.1 2587694 D 323098 CDS YP_318974.1 75676553 3677320 2588626..2590560 1 NC_007406.1 peptidase M24 2590560 3677320 Nwi_2368 Nitrobacter winogradskyi Nb-255 peptidase M24 YP_318974.1 2588626 D 323098 CDS YP_318975.1 75676554 3677321 2590843..2591952 1 NC_007406.1 hypothetical protein 2591952 3677321 Nwi_2369 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318975.1 2590843 D 323098 CDS YP_318976.1 75676555 3677322 complement(2592339..2592980) 1 NC_007406.1 ISRm2011-2 transposase 2592980 3677322 Nwi_2370 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_318976.1 2592339 R 323098 CDS YP_318977.1 75676556 3677323 complement(2592932..2593282) 1 NC_007406.1 transposase 2593282 3677323 Nwi_2371 Nitrobacter winogradskyi Nb-255 transposase YP_318977.1 2592932 R 323098 CDS YP_318978.1 75676557 3674663 2593519..2594427 1 NC_007406.1 hypothetical protein 2594427 3674663 Nwi_2372 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318978.1 2593519 D 323098 CDS YP_318979.1 75676558 3674664 2594349..2594843 1 NC_007406.1 hypothetical protein 2594843 3674664 Nwi_2373 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318979.1 2594349 D 323098 CDS YP_318980.1 75676559 3674665 complement(2594866..2595141) 1 NC_007406.1 hypothetical protein 2595141 3674665 Nwi_2374 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318980.1 2594866 R 323098 CDS YP_318981.1 75676560 3674666 complement(2595216..2595425) 1 NC_007406.1 cold-shock protein, DNA-binding 2595425 3674666 Nwi_2375 Nitrobacter winogradskyi Nb-255 cold-shock protein, DNA-binding YP_318981.1 2595216 R 323098 CDS YP_318982.1 75676561 3674667 2595585..2595956 1 NC_007406.1 hypothetical protein 2595956 3674667 Nwi_2376 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318982.1 2595585 D 323098 CDS YP_318983.1 75676562 3674668 complement(2596126..2597583) 1 NC_007406.1 catalyzes the formation of L-homocysteine from S-adenosyl-L-homocysteine; S-adenosyl-L-homocysteine hydrolase 2597583 3674668 Nwi_2377 Nitrobacter winogradskyi Nb-255 S-adenosyl-L-homocysteine hydrolase YP_318983.1 2596126 R 323098 CDS YP_318984.1 75676563 3674669 complement(2597787..2598983) 1 NC_007406.1 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 2598983 3674669 Nwi_2378 Nitrobacter winogradskyi Nb-255 S-adenosylmethionine synthetase YP_318984.1 2597787 R 323098 CDS YP_318985.1 75676564 3674670 complement(2599040..2600392) 1 NC_007406.1 hypothetical protein 2600392 3674670 Nwi_2379 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318985.1 2599040 R 323098 CDS YP_318986.1 75676565 3674671 2600738..2602048 1 NC_007406.1 UDP-glucose/GDP-mannose dehydrogenase 2602048 3674671 Nwi_2380 Nitrobacter winogradskyi Nb-255 UDP-glucose/GDP-mannose dehydrogenase YP_318986.1 2600738 D 323098 CDS YP_318987.1 75676566 3674672 2602208..2602399 1 NC_007406.1 hypothetical protein 2602399 3674672 Nwi_2381 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318987.1 2602208 D 323098 CDS YP_318988.1 75676567 3674673 complement(2602422..2603279) 1 NC_007406.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 2603279 purU 3674673 purU Nitrobacter winogradskyi Nb-255 formyltetrahydrofolate deformylase YP_318988.1 2602422 R 323098 CDS YP_318989.1 75676568 3674674 2603651..2604652 1 NC_007406.1 glycosyl transferase 2604652 3674674 Nwi_2383 Nitrobacter winogradskyi Nb-255 glycosyl transferase YP_318989.1 2603651 D 323098 CDS YP_318990.1 75676569 3676085 complement(2604834..2605784) 1 NC_007406.1 NAD-dependent epimerase/dehydratase 2605784 3676085 Nwi_2384 Nitrobacter winogradskyi Nb-255 NAD-dependent epimerase/dehydratase YP_318990.1 2604834 R 323098 CDS YP_318991.1 75676570 3674414 complement(2605765..2606850) 1 NC_007406.1 GDP-mannose 4,6-dehydratase 2606850 3674414 Nwi_2385 Nitrobacter winogradskyi Nb-255 GDP-mannose 4,6-dehydratase YP_318991.1 2605765 R 323098 CDS YP_318992.1 75676571 3675476 2607104..2608303 1 NC_007406.1 group 1 glycosyl transferase 2608303 3675476 Nwi_2386 Nitrobacter winogradskyi Nb-255 group 1 glycosyl transferase YP_318992.1 2607104 D 323098 CDS YP_318993.1 75676572 3675477 2608300..2609265 1 NC_007406.1 NAD-dependent epimerase/dehydratase 2609265 3675477 Nwi_2387 Nitrobacter winogradskyi Nb-255 NAD-dependent epimerase/dehydratase YP_318993.1 2608300 D 323098 CDS YP_318994.1 75676573 3675478 2609417..2610730 1 NC_007406.1 class III aminotransferase 2610730 3675478 Nwi_2388 Nitrobacter winogradskyi Nb-255 class III aminotransferase YP_318994.1 2609417 D 323098 CDS YP_318995.1 75676574 3675479 complement(2610737..2611435) 1 NC_007406.1 hypothetical protein 2611435 3675479 Nwi_2389 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_318995.1 2610737 R 323098 CDS YP_318996.1 75676575 3675480 complement(2611404..2612180) 1 NC_007406.1 histidine biosynthesis protein 2612180 3675480 Nwi_2390 Nitrobacter winogradskyi Nb-255 histidine biosynthesis protein YP_318996.1 2611404 R 323098 CDS YP_318997.1 75676576 3675481 complement(2612191..2612829) 1 NC_007406.1 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2612829 3675481 Nwi_2391 Nitrobacter winogradskyi Nb-255 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit YP_318997.1 2612191 R 323098 CDS YP_318998.1 75676577 3675383 complement(2612855..2614033) 1 NC_007406.1 LPS biosynthesis protein 2614033 3675383 Nwi_2392 Nitrobacter winogradskyi Nb-255 LPS biosynthesis protein YP_318998.1 2612855 R 323098 CDS YP_318999.1 75676578 3675384 complement(2614070..2614882) 1 NC_007406.1 short-chain dehydrogenase 2614882 3675384 Nwi_2393 Nitrobacter winogradskyi Nb-255 short-chain dehydrogenase YP_318999.1 2614070 R 323098 CDS YP_319000.1 75676579 3675385 complement(2614879..2615919) 1 NC_007406.1 nucleotidyl transferase 2615919 3675385 Nwi_2394 Nitrobacter winogradskyi Nb-255 nucleotidyl transferase YP_319000.1 2614879 R 323098 CDS YP_319001.1 75676580 3674928 complement(2615916..2616554) 1 NC_007406.1 hexapeptide transferase 2616554 3674928 Nwi_2395 Nitrobacter winogradskyi Nb-255 hexapeptide transferase YP_319001.1 2615916 R 323098 CDS YP_319002.1 75676581 3675949 complement(2616551..2617666) 1 NC_007406.1 antifreeze-like protein NeuB 2617666 3675949 Nwi_2396 Nitrobacter winogradskyi Nb-255 antifreeze-like protein NeuB YP_319002.1 2616551 R 323098 CDS YP_319003.1 75676582 3675950 2617772..2618521 1 NC_007406.1 acylneuraminate cytidylyltransferase 2618521 3675950 Nwi_2397 Nitrobacter winogradskyi Nb-255 acylneuraminate cytidylyltransferase YP_319003.1 2617772 D 323098 CDS YP_319004.1 75676583 3675951 2618500..2619729 1 NC_007406.1 UDP-N-acetylglucosamine 2-epimerase 2619729 3675951 Nwi_2398 Nitrobacter winogradskyi Nb-255 UDP-N-acetylglucosamine 2-epimerase YP_319004.1 2618500 D 323098 CDS YP_319005.1 75676584 3675952 2619798..2620955 1 NC_007406.1 hypothetical protein 2620955 3675952 Nwi_2399 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319005.1 2619798 D 323098 CDS YP_319006.1 75676585 3675953 complement(2620990..2621793) 1 NC_007406.1 methyltransferase FkbM 2621793 3675953 Nwi_2400 Nitrobacter winogradskyi Nb-255 methyltransferase FkbM YP_319006.1 2620990 R 323098 CDS YP_319007.1 75676586 3675954 2621928..2622878 1 NC_007406.1 NAD-dependent epimerase/dehydratase 2622878 3675954 Nwi_2401 Nitrobacter winogradskyi Nb-255 NAD-dependent epimerase/dehydratase YP_319007.1 2621928 D 323098 CDS YP_319008.1 75676587 3675955 complement(2622903..2624369) 1 NC_007406.1 hypothetical protein 2624369 3675955 Nwi_2402 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319008.1 2622903 R 323098 CDS YP_319009.1 75676588 3675956 complement(2624638..2625897) 1 NC_007406.1 O-antigen and teichoic acid export protein 2625897 3675956 Nwi_2403 Nitrobacter winogradskyi Nb-255 O-antigen and teichoic acid export protein YP_319009.1 2624638 R 323098 CDS YP_319010.1 75676589 3675957 complement(2626101..2627324) 1 NC_007406.1 hypothetical protein 2627324 3675957 Nwi_2404 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319010.1 2626101 R 323098 CDS YP_319011.1 75676590 3675958 complement(2627501..2628709) 1 NC_007406.1 DegT/DnrJ/EryC1/StrS aminotransferase 2628709 3675958 Nwi_2405 Nitrobacter winogradskyi Nb-255 DegT/DnrJ/EryC1/StrS aminotransferase YP_319011.1 2627501 R 323098 CDS YP_319012.1 75676591 3675959 complement(2628719..2629723) 1 NC_007406.1 NAD-dependent epimerase/dehydratase 2629723 3675959 Nwi_2406 Nitrobacter winogradskyi Nb-255 NAD-dependent epimerase/dehydratase YP_319012.1 2628719 R 323098 CDS YP_319013.1 75676592 3675960 complement(2630120..2631100) 1 NC_007406.1 Fis family transcriptional regulator 2631100 3675960 Nwi_2407 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_319013.1 2630120 R 323098 CDS YP_319014.1 75676593 3675961 complement(2631097..2631471) 1 NC_007406.1 transposase IS3/IS911 2631471 3675961 Nwi_2408 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_319014.1 2631097 R 323098 CDS YP_319015.1 75676594 3675962 2631492..2632145 1 NC_007406.1 hypothetical protein 2632145 3675962 Nwi_2409 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319015.1 2631492 D 323098 CDS YP_319016.1 75676595 3675963 2632314..2633594 1 NC_007406.1 O-antigen polymerase 2633594 3675963 Nwi_2410 Nitrobacter winogradskyi Nb-255 O-antigen polymerase YP_319016.1 2632314 D 323098 CDS YP_319017.1 75676596 3677106 complement(2633766..2634482) 1 NC_007406.1 ISRm2011-2 transposase 2634482 3677106 Nwi_2411 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_319017.1 2633766 R 323098 CDS YP_319018.1 75676597 3677107 2634866..2635231 1 NC_007406.1 ISBm1, transposase orfA 2635231 3677107 Nwi_2412 Nitrobacter winogradskyi Nb-255 ISBm1, transposase orfA YP_319018.1 2634866 D 323098 CDS YP_319019.1 75676598 3677108 complement(2635754..2637001) 1 NC_007406.1 class V aminotransferase 2637001 3677108 Nwi_2413 Nitrobacter winogradskyi Nb-255 class V aminotransferase YP_319019.1 2635754 R 323098 CDS YP_319020.1 75676599 3677109 2637292..2637561 1 NC_007406.1 hypothetical protein 2637561 3677109 Nwi_2414 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319020.1 2637292 D 323098 CDS YP_319021.1 75676600 3677210 2637621..2637914 1 NC_007406.1 hypothetical protein 2637914 3677210 Nwi_2415 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319021.1 2637621 D 323098 CDS YP_319022.1 75676601 3676529 2638083..2638523 1 NC_007406.1 histidine triad (HIT) protein 2638523 3676529 Nwi_2416 Nitrobacter winogradskyi Nb-255 histidine triad (HIT) protein YP_319022.1 2638083 D 323098 CDS YP_319023.1 75676602 3676530 complement(2638700..2639452) 1 NC_007406.1 cyclic nucleotide-binding protein 2639452 3676530 Nwi_2417 Nitrobacter winogradskyi Nb-255 cyclic nucleotide-binding protein YP_319023.1 2638700 R 323098 CDS YP_319024.1 75676603 3676531 2639680..2640159 1 NC_007406.1 hypothetical protein 2640159 3676531 Nwi_2418 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319024.1 2639680 D 323098 CDS YP_319025.1 75676604 3676532 complement(2640188..2641447) 1 NC_007406.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 2641447 3676532 Nwi_2419 Nitrobacter winogradskyi Nb-255 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_319025.1 2640188 R 323098 CDS YP_319026.1 75676605 3676533 complement(2641444..2642085) 1 NC_007406.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 2642085 bioD 3676533 bioD Nitrobacter winogradskyi Nb-255 dithiobiotin synthetase YP_319026.1 2641444 R 323098 CDS YP_319027.1 75676606 3676534 complement(2642082..2643218) 1 NC_007406.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 2643218 3676534 Nwi_2421 Nitrobacter winogradskyi Nb-255 8-amino-7-oxononanoate synthase YP_319027.1 2642082 R 323098 CDS YP_319028.1 75676607 3676535 complement(2643259..2643588) 1 NC_007406.1 hypothetical protein 2643588 3676535 Nwi_2422 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319028.1 2643259 R 323098 CDS YP_319029.1 75676608 3676536 2643783..2644760 1 NC_007406.1 hypothetical protein 2644760 3676536 Nwi_2423 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319029.1 2643783 D 323098 CDS YP_319030.1 75676609 3676537 2644813..2645796 1 NC_007406.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 2645796 3676537 Nwi_2424 Nitrobacter winogradskyi Nb-255 quinolinate synthetase YP_319030.1 2644813 D 323098 CDS YP_319031.1 75676610 3676538 2645793..2647322 1 NC_007406.1 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 2647322 3676538 Nwi_2425 Nitrobacter winogradskyi Nb-255 L-aspartate oxidase YP_319031.1 2645793 D 323098 CDS YP_319032.1 75676611 3676539 2647341..2648204 1 NC_007406.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 2648204 3676539 Nwi_2426 Nitrobacter winogradskyi Nb-255 nicotinate-nucleotide pyrophosphorylase YP_319032.1 2647341 D 323098 CDS YP_319033.1 75676612 3676540 2648267..2648719 1 NC_007406.1 hypothetical protein 2648719 3676540 Nwi_2427 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319033.1 2648267 D 323098 CDS YP_319034.1 75676613 3676541 2649252..2649665 1 NC_007406.1 hypothetical protein 2649665 3676541 Nwi_2428 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319034.1 2649252 D 323098 CDS YP_319035.1 75676614 3676542 2650050..2651270 1 NC_007406.1 diguanylate cyclase 2651270 3676542 Nwi_2429 Nitrobacter winogradskyi Nb-255 diguanylate cyclase YP_319035.1 2650050 D 323098 CDS YP_319036.1 75676615 3676543 complement(2651690..2652589) 1 NC_007406.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 2652589 3676543 Nwi_2430 Nitrobacter winogradskyi Nb-255 RNA polymerase factor sigma-32 YP_319036.1 2651690 R 323098 CDS YP_319037.1 75676616 3674583 complement(2652806..2653861) 1 NC_007406.1 pseudouridine synthase 2653861 3674583 Nwi_2431 Nitrobacter winogradskyi Nb-255 pseudouridine synthase YP_319037.1 2652806 R 323098 CDS YP_319038.1 75676617 3674584 2653860..2654192 1 NC_007406.1 hypothetical protein 2654192 3674584 Nwi_2432 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319038.1 2653860 D 323098 CDS YP_319039.1 75676618 3674586 complement(2655487..2656467) 1 NC_007406.1 Fis family transcriptional regulator 2656467 3674586 Nwi_2433 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_319039.1 2655487 R 323098 CDS YP_319040.1 75676619 3674587 complement(2656464..2656838) 1 NC_007406.1 transposase IS3/IS911 2656838 3674587 Nwi_2434 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_319040.1 2656464 R 323098 CDS YP_319041.1 75676620 3674589 complement(2657155..2658195) 1 NC_007406.1 hypothetical protein 2658195 3674589 Nwi_2436 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319041.1 2657155 R 323098 CDS YP_319042.1 75676621 3674590 2658740..2659456 1 NC_007406.1 ISRm2011-2 transposase 2659456 3674590 Nwi_2437 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_319042.1 2658740 D 323098 CDS YP_319043.1 75676622 3674591 complement(2659543..2660361) 1 NC_007406.1 lytic murein transglycosylase 2660361 3674591 Nwi_2438 Nitrobacter winogradskyi Nb-255 lytic murein transglycosylase YP_319043.1 2659543 R 323098 CDS YP_319044.1 75676623 3674592 2660420..2661121 1 NC_007406.1 hypothetical protein 2661121 3674592 Nwi_2439 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319044.1 2660420 D 323098 CDS YP_319045.1 75676624 3674593 complement(2661161..2663314) 1 NC_007406.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 2663314 3674593 Nwi_2440 Nitrobacter winogradskyi Nb-255 RNA polymerase sigma factor RpoD YP_319045.1 2661161 R 323098 CDS YP_319046.1 75676625 3674594 complement(2664131..2666035) 1 NC_007406.1 synthesizes RNA primers at the replication forks; DNA primase 2666035 dnaG 3674594 dnaG Nitrobacter winogradskyi Nb-255 DNA primase YP_319046.1 2664131 R 323098 CDS YP_319047.1 75676626 3674595 2666169..2666720 1 NC_007406.1 hypothetical protein 2666720 3674595 Nwi_2442 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319047.1 2666169 D 323098 CDS YP_319048.1 75676627 3674596 2666717..2667517 1 NC_007406.1 N-formylglutamate amidohydrolase 2667517 3674596 Nwi_2443 Nitrobacter winogradskyi Nb-255 N-formylglutamate amidohydrolase YP_319048.1 2666717 D 323098 CDS YP_319049.1 75676628 3674597 complement(2667706..2667870) 1 NC_007406.1 hypothetical protein 2667870 3674597 Nwi_2444 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319049.1 2667706 R 323098 CDS YP_319050.1 75676629 3674598 complement(2668109..2668564) 1 NC_007406.1 hypothetical protein 2668564 3674598 Nwi_2445 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319050.1 2668109 R 323098 CDS YP_319051.1 75676630 3674599 2668718..2669908 1 NC_007406.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 2669908 3674599 Nwi_2446 Nitrobacter winogradskyi Nb-255 carbamoyl phosphate synthase small subunit YP_319051.1 2668718 D 323098 CDS YP_319052.1 75676631 3674600 complement(2669993..2670529) 1 NC_007406.1 ferritin 2670529 3674600 Nwi_2447 Nitrobacter winogradskyi Nb-255 ferritin YP_319052.1 2669993 R 323098 CDS YP_319053.1 75676632 3674822 2670583..2671437 1 NC_007406.1 hypothetical protein 2671437 3674822 Nwi_2448 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319053.1 2670583 D 323098 CDS YP_319054.1 75676633 3674825 2672502..2675966 1 NC_007406.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 2675966 carB 3674825 carB Nitrobacter winogradskyi Nb-255 carbamoyl phosphate synthase large subunit YP_319054.1 2672502 D 323098 CDS YP_319055.1 75676634 3674826 2676420..2676896 1 NC_007406.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 2676896 greA 3674826 greA Nitrobacter winogradskyi Nb-255 transcription elongation factor GreA YP_319055.1 2676420 D 323098 CDS YP_319056.1 75676635 3674827 2677063..2677461 1 NC_007406.1 hypothetical protein 2677461 3674827 Nwi_2451 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319056.1 2677063 D 323098 CDS YP_319057.1 75676636 3674828 complement(2677479..2677991) 1 NC_007406.1 AsnC family transcriptional regulator 2677991 3674828 Nwi_2452 Nitrobacter winogradskyi Nb-255 AsnC family transcriptional regulator YP_319057.1 2677479 R 323098 CDS YP_319058.1 75676637 3674829 2678309..2679274 1 NC_007406.1 thioredoxin reductase 2679274 3674829 Nwi_2453 Nitrobacter winogradskyi Nb-255 thioredoxin reductase YP_319058.1 2678309 D 323098 CDS YP_319059.1 75676638 3674830 2679289..2680182 1 NC_007406.1 LysR family transcriptional regulator 2680182 3674830 Nwi_2454 Nitrobacter winogradskyi Nb-255 LysR family transcriptional regulator YP_319059.1 2679289 D 323098 CDS YP_319060.1 75676639 3674831 complement(2680332..2681012) 1 NC_007406.1 cobyrinic acid a,c-diamide synthase 2681012 3674831 Nwi_2455 Nitrobacter winogradskyi Nb-255 cobyrinic acid a,c-diamide synthase YP_319060.1 2680332 R 323098 CDS YP_319061.1 75676640 3674832 complement(2681201..2681512) 1 NC_007406.1 hypothetical protein 2681512 3674832 Nwi_2456 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319061.1 2681201 R 323098 CDS YP_319062.1 75676641 3674833 complement(2681619..2681771) 1 NC_007406.1 hypothetical protein 2681771 3674833 Nwi_2457 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319062.1 2681619 R 323098 CDS YP_319063.1 75676642 3674835 complement(2682494..2683612) 1 NC_007406.1 extensin-like protein 2683612 3674835 Nwi_2458 Nitrobacter winogradskyi Nb-255 extensin-like protein YP_319063.1 2682494 R 323098 CDS YP_319064.1 75676643 3674836 2683954..2685510 1 NC_007406.1 hypothetical protein 2685510 3674836 Nwi_2459 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319064.1 2683954 D 323098 CDS YP_319065.1 75676644 3674837 complement(2685585..2685797) 1 NC_007406.1 hypothetical protein 2685797 3674837 Nwi_2460 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319065.1 2685585 R 323098 CDS YP_319066.1 75676645 3674413 complement(2685944..2686453) 1 NC_007406.1 hypothetical protein 2686453 3674413 Nwi_2461 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319066.1 2685944 R 323098 CDS YP_319067.1 75676646 3675496 complement(2686535..2686894) 1 NC_007406.1 hypothetical protein 2686894 3675496 Nwi_2462 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319067.1 2686535 R 323098 CDS YP_319068.1 75676647 3674680 2687120..2687596 1 NC_007406.1 lytic transglycosylase, catalytic 2687596 3674680 Nwi_2463 Nitrobacter winogradskyi Nb-255 lytic transglycosylase, catalytic YP_319068.1 2687120 D 323098 CDS YP_319069.1 75676648 3674681 2687822..2688838 1 NC_007406.1 FAD dependent oxidoreductase 2688838 3674681 Nwi_2464 Nitrobacter winogradskyi Nb-255 FAD dependent oxidoreductase YP_319069.1 2687822 D 323098 CDS YP_319070.1 75676649 3674682 2688829..2689026 1 NC_007406.1 sulfur carrier protein ThiS 2689026 3674682 Nwi_2465 Nitrobacter winogradskyi Nb-255 sulfur carrier protein ThiS YP_319070.1 2688829 D 323098 CDS YP_319071.1 75676650 3674683 2689092..2689874 1 NC_007406.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 2689874 thiG 3674683 thiG Nitrobacter winogradskyi Nb-255 thiazole synthase YP_319071.1 2689092 D 323098 CDS YP_319072.1 75676651 3674684 2689861..2690505 1 NC_007406.1 thiamine monophosphate synthase 2690505 3674684 Nwi_2467 Nitrobacter winogradskyi Nb-255 thiamine monophosphate synthase YP_319072.1 2689861 D 323098 CDS YP_319073.1 75676652 3674685 2690618..2692558 1 NC_007406.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 2692558 3674685 Nwi_2468 Nitrobacter winogradskyi Nb-255 thiamine biosynthesis protein ThiC YP_319073.1 2690618 D 323098 CDS YP_319074.1 75676653 3674686 2692561..2693625 1 NC_007406.1 hypothetical protein 2693625 3674686 Nwi_2469 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319074.1 2692561 D 323098 CDS YP_319075.1 75676654 3674687 2694059..2694313 1 NC_007406.1 Fis family transcriptional regulator 2694313 3674687 Nwi_2470 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_319075.1 2694059 D 323098 CDS YP_319076.1 75676655 3674688 2694494..2696581 1 NC_007406.1 peptidase S9, prolyl oligopeptidase 2696581 3674688 Nwi_2471 Nitrobacter winogradskyi Nb-255 peptidase S9, prolyl oligopeptidase YP_319076.1 2694494 D 323098 CDS YP_319077.1 75676656 3674689 2696673..2697224 1 NC_007406.1 triple helix repeat-containing collagen 2697224 3674689 Nwi_2472 Nitrobacter winogradskyi Nb-255 triple helix repeat-containing collagen YP_319077.1 2696673 D 323098 CDS YP_319078.1 75676657 3674690 complement(2697566..2697934) 1 NC_007406.1 transposase, IS4 2697934 3674690 Nwi_2473 Nitrobacter winogradskyi Nb-255 transposase, IS4 YP_319078.1 2697566 R 323098 CDS YP_319079.1 75676658 3674691 complement(2697949..2698347) 1 NC_007406.1 transposase 2698347 3674691 Nwi_2474 Nitrobacter winogradskyi Nb-255 transposase YP_319079.1 2697949 R 323098 CDS YP_319080.1 75676659 3674692 complement(2698403..2698885) 1 NC_007406.1 bacterioferritin 2698885 3674692 Nwi_2475 Nitrobacter winogradskyi Nb-255 bacterioferritin YP_319080.1 2698403 R 323098 CDS YP_319081.1 75676660 3674693 complement(2699048..2699305) 1 NC_007406.1 bacterioferritin 2699305 3674693 Nwi_2476 Nitrobacter winogradskyi Nb-255 bacterioferritin YP_319081.1 2699048 R 323098 CDS YP_319082.1 75676661 3674694 2699629..2699946 1 NC_007406.1 hypothetical protein 2699946 3674694 Nwi_2477 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319082.1 2699629 D 323098 CDS YP_319083.1 75676662 3674695 2700244..2700546 1 NC_007406.1 hypothetical protein 2700546 3674695 Nwi_2478 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319083.1 2700244 D 323098 CDS YP_319084.1 75676663 3674696 complement(2700704..2701963) 1 NC_007406.1 lytic murein transglycosylase 2701963 3674696 Nwi_2479 Nitrobacter winogradskyi Nb-255 lytic murein transglycosylase YP_319084.1 2700704 R 323098 CDS YP_319085.1 75676664 3676794 complement(2701965..2702555) 1 NC_007406.1 hypothetical protein 2702555 3676794 Nwi_2480 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319085.1 2701965 R 323098 CDS YP_319086.1 75676665 3676795 complement(2702727..2703497) 1 NC_007406.1 catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate; trans-aconitate 2-methyltransferase 2703497 3676795 Nwi_2481 Nitrobacter winogradskyi Nb-255 trans-aconitate 2-methyltransferase YP_319086.1 2702727 R 323098 CDS YP_319087.1 75676666 3676796 complement(2703669..2705657) 1 NC_007406.1 hypothetical protein 2705657 3676796 Nwi_2482 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319087.1 2703669 R 323098 CDS YP_319088.1 75676667 3676797 2705897..2706196 1 NC_007406.1 hypothetical protein 2706196 3676797 Nwi_2483 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319088.1 2705897 D 323098 CDS YP_319089.1 75676668 3676798 2706183..2706440 1 NC_007406.1 hypothetical protein 2706440 3676798 Nwi_2484 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319089.1 2706183 D 323098 CDS YP_319090.1 75676669 3676799 complement(2707057..2708709) 1 NC_007406.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 2708709 3676799 Nwi_2485 Nitrobacter winogradskyi Nb-255 ABC transporter ATP-binding protein YP_319090.1 2707057 R 323098 CDS YP_319091.1 75676670 3676800 2709108..2709311 1 NC_007406.1 hypothetical protein 2709311 3676800 Nwi_2486 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319091.1 2709108 D 323098 CDS YP_319092.1 75676671 3676801 2709365..2709622 1 NC_007406.1 hypothetical protein 2709622 3676801 Nwi_2487 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319092.1 2709365 D 323098 CDS YP_319093.1 75676672 3676802 complement(2709760..2710875) 1 NC_007406.1 ErfK/YbiS/YcfS/YnhG 2710875 3676802 Nwi_2488 Nitrobacter winogradskyi Nb-255 ErfK/YbiS/YcfS/YnhG YP_319093.1 2709760 R 323098 CDS YP_319094.1 75676673 3676803 2711208..2711987 1 NC_007406.1 hypothetical protein 2711987 3676803 Nwi_2489 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319094.1 2711208 D 323098 CDS YP_319095.1 75676674 3676804 complement(2712114..2712992) 1 NC_007406.1 rhodanese-related sulfurtransferase 2712992 3676804 Nwi_2490 Nitrobacter winogradskyi Nb-255 rhodanese-related sulfurtransferase YP_319095.1 2712114 R 323098 CDS YP_319096.1 75676675 3676805 complement(2713178..2713771) 1 NC_007406.1 N-acetyltransferase 2713771 3676805 Nwi_2491 Nitrobacter winogradskyi Nb-255 N-acetyltransferase YP_319096.1 2713178 R 323098 CDS YP_319097.1 75676676 3676806 complement(2714009..2714377) 1 NC_007406.1 hypothetical protein 2714377 3676806 Nwi_2492 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319097.1 2714009 R 323098 CDS YP_319098.1 75676677 3676807 2714553..2715365 1 NC_007406.1 hypothetical protein 2715365 3676807 Nwi_2493 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319098.1 2714553 D 323098 CDS YP_319099.1 75676678 3676808 2715422..2715658 1 NC_007406.1 hypothetical protein 2715658 3676808 Nwi_2494 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319099.1 2715422 D 323098 CDS YP_319100.1 75676679 3676809 2715729..2718827 1 NC_007406.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 2718827 3676809 Nwi_2495 Nitrobacter winogradskyi Nb-255 excinuclease ABC subunit B YP_319100.1 2715729 D 323098 CDS YP_319101.1 75676680 3676810 2719110..2719445 1 NC_007406.1 hypothetical protein 2719445 3676810 Nwi_2496 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319101.1 2719110 D 323098 CDS YP_319102.1 75676681 3676811 2719704..2720594 1 NC_007406.1 hypothetical protein 2720594 3676811 Nwi_2497 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319102.1 2719704 D 323098 CDS YP_319103.1 75676682 3676812 complement(2720808..2721176) 1 NC_007406.1 transposase, IS4 2721176 3676812 Nwi_2498 Nitrobacter winogradskyi Nb-255 transposase, IS4 YP_319103.1 2720808 R 323098 CDS YP_319104.1 75676683 3676813 complement(2721191..2721589) 1 NC_007406.1 transposase 2721589 3676813 Nwi_2499 Nitrobacter winogradskyi Nb-255 transposase YP_319104.1 2721191 R 323098 CDS YP_319105.1 75676684 3675307 2721839..2722297 1 NC_007406.1 hypothetical protein 2722297 3675307 Nwi_2500 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319105.1 2721839 D 323098 CDS YP_319106.1 75676685 3675308 complement(2722502..2723497) 1 NC_007406.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 2723497 3675308 Nwi_2501 Nitrobacter winogradskyi Nb-255 ribose-phosphate pyrophosphokinase YP_319106.1 2722502 R 323098 CDS YP_319107.1 75676686 3675309 complement(2723630..2724400) 1 NC_007406.1 hypothetical protein 2724400 3675309 Nwi_2502 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319107.1 2723630 R 323098 CDS YP_319108.1 75676687 3675310 complement(2724397..2725569) 1 NC_007406.1 hypothetical protein 2725569 3675310 Nwi_2503 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319108.1 2724397 R 323098 CDS YP_319109.1 75676688 3675311 complement(2725517..2726392) 1 NC_007406.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 2726392 3675311 Nwi_2504 Nitrobacter winogradskyi Nb-255 prolipoprotein diacylglyceryl transferase YP_319109.1 2725517 R 323098 CDS YP_319110.1 75676689 3675312 2726715..2726972 1 NC_007406.1 hypothetical protein 2726972 3675312 Nwi_2505 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319110.1 2726715 D 323098 CDS YP_319111.1 75676690 3675313 complement(2726994..2727212) 1 NC_007406.1 hypothetical protein 2727212 3675313 Nwi_2506 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319111.1 2726994 R 323098 CDS YP_319112.1 75676691 3675314 complement(2727451..2727936) 1 NC_007406.1 acyl dehydratase MaoC 2727936 3675314 Nwi_2507 Nitrobacter winogradskyi Nb-255 acyl dehydratase MaoC YP_319112.1 2727451 R 323098 CDS YP_319113.1 75676692 3675315 complement(2727941..2728402) 1 NC_007406.1 acyl dehydratase MaoC 2728402 3675315 Nwi_2508 Nitrobacter winogradskyi Nb-255 acyl dehydratase MaoC YP_319113.1 2727941 R 323098 CDS YP_319114.1 75676693 3675316 2728575..2728871 1 NC_007406.1 hypothetical protein 2728871 3675316 Nwi_2509 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319114.1 2728575 D 323098 CDS YP_319115.1 75676694 3675317 complement(2728983..2730080) 1 NC_007406.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 2730080 3675317 Nwi_2510 Nitrobacter winogradskyi Nb-255 GTP-dependent nucleic acid-binding protein EngD YP_319115.1 2728983 R 323098 CDS YP_319116.1 75676695 3675318 complement(2730280..2730888) 1 NC_007406.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 2730888 3675318 Nwi_2511 Nitrobacter winogradskyi Nb-255 peptidyl-tRNA hydrolase YP_319116.1 2730280 R 323098 CDS YP_319117.1 75676696 3675319 complement(2730904..2731590) 1 NC_007406.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 2731590 3675319 Nwi_2512 Nitrobacter winogradskyi Nb-255 50S ribosomal protein L25 YP_319117.1 2730904 R 323098 CDS YP_319118.1 75676697 3675320 2732214..2732714 1 NC_007406.1 hypothetical protein 2732714 3675320 Nwi_2513 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319118.1 2732214 D 323098 CDS YP_319119.1 75676698 3675321 2732723..2733628 1 NC_007406.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 2733628 3675321 Nwi_2514 Nitrobacter winogradskyi Nb-255 pyrroline-5-carboxylate reductase YP_319119.1 2732723 D 323098 CDS YP_319120.1 75676699 3675322 2733741..2735249 1 NC_007406.1 aldehyde dehydrogenase 2735249 3675322 Nwi_2515 Nitrobacter winogradskyi Nb-255 aldehyde dehydrogenase YP_319120.1 2733741 D 323098 CDS YP_319121.1 75676700 3675323 complement(2735458..2736726) 1 NC_007406.1 ornithine aminotransferase 2736726 3675323 Nwi_2516 Nitrobacter winogradskyi Nb-255 ornithine aminotransferase YP_319121.1 2735458 R 323098 CDS YP_319122.1 75676701 3675324 complement(2736917..2738317) 1 NC_007406.1 Signal transduction histidine kinase 2738317 3675324 Nwi_2517 Nitrobacter winogradskyi Nb-255 Signal transduction histidine kinase YP_319122.1 2736917 R 323098 CDS YP_319123.1 75676702 3675325 complement(2738314..2739054) 1 NC_007406.1 two-component transcriptional regulator 2739054 3675325 Nwi_2518 Nitrobacter winogradskyi Nb-255 two-component transcriptional regulator YP_319123.1 2738314 R 323098 CDS YP_319124.1 75676703 3675473 complement(2739051..2739560) 1 NC_007406.1 MarR family transcriptional regulator 2739560 3675473 Nwi_2519 Nitrobacter winogradskyi Nb-255 MarR family transcriptional regulator YP_319124.1 2739051 R 323098 CDS YP_319125.1 75676704 3675474 2739892..2741004 1 NC_007406.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 2741004 3675474 Nwi_2520 Nitrobacter winogradskyi Nb-255 branched-chain amino acid aminotransferase YP_319125.1 2739892 D 323098 CDS YP_319126.1 75676705 3675475 complement(2741044..2742516) 1 NC_007406.1 multi anti extrusion protein MatE 2742516 3675475 Nwi_2521 Nitrobacter winogradskyi Nb-255 multi anti extrusion protein MatE YP_319126.1 2741044 R 323098 CDS YP_319127.1 75676706 3674675 complement(2742681..2743703) 1 NC_007406.1 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2743703 3674675 Nwi_2522 Nitrobacter winogradskyi Nb-255 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_319127.1 2742681 R 323098 CDS YP_319128.1 75676707 3674676 complement(2743703..2744170) 1 NC_007406.1 molybdopterin biosynthesis MoaE 2744170 3674676 Nwi_2523 Nitrobacter winogradskyi Nb-255 molybdopterin biosynthesis MoaE YP_319128.1 2743703 R 323098 CDS YP_319129.1 75676708 3676300 complement(2744193..2744444) 1 NC_007406.1 molybdopterin converting factor subunit 1 2744444 3676300 Nwi_2524 Nitrobacter winogradskyi Nb-255 molybdopterin converting factor subunit 1 YP_319129.1 2744193 R 323098 CDS YP_319130.1 75676709 3676827 complement(2744441..2745058) 1 NC_007406.1 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2745058 3676827 Nwi_2525 Nitrobacter winogradskyi Nb-255 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_319130.1 2744441 R 323098 CDS YP_319131.1 75676710 3676828 complement(2745191..2747191) 1 NC_007406.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 2747191 uvrC 3676828 uvrC Nitrobacter winogradskyi Nb-255 excinuclease ABC subunit C YP_319131.1 2745191 R 323098 CDS YP_319132.1 75676711 3676829 2747653..2748273 1 NC_007406.1 outer-membrane immunogenic protein precursor 2748273 3676829 Nwi_2527 Nitrobacter winogradskyi Nb-255 outer-membrane immunogenic protein precursor YP_319132.1 2747653 D 323098 CDS YP_319133.1 75676712 3676830 complement(2748374..2749228) 1 NC_007406.1 hypothetical protein 2749228 3676830 Nwi_2528 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319133.1 2748374 R 323098 CDS YP_319134.1 75676713 3676831 complement(2749326..2750015) 1 NC_007406.1 ribonuclease T2 2750015 3676831 Nwi_2529 Nitrobacter winogradskyi Nb-255 ribonuclease T2 YP_319134.1 2749326 R 323098 CDS YP_319135.1 75676714 3676832 complement(2750357..2750812) 1 NC_007406.1 hypothetical protein 2750812 3676832 Nwi_2530 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319135.1 2750357 R 323098 CDS YP_319136.1 75676715 3676833 2750979..2751269 1 NC_007406.1 hypothetical protein 2751269 3676833 Nwi_2531 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319136.1 2750979 D 323098 CDS YP_319137.1 75676716 3676834 2751296..2751826 1 NC_007406.1 hypothetical protein 2751826 3676834 Nwi_2532 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319137.1 2751296 D 323098 CDS YP_319138.1 75676717 3676835 complement(2751884..2753527) 1 NC_007406.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 2753527 hisS 3676835 hisS Nitrobacter winogradskyi Nb-255 histidyl-tRNA synthetase YP_319138.1 2751884 R 323098 CDS YP_319139.1 75676718 3676836 2753685..2754029 1 NC_007406.1 hypothetical protein 2754029 3676836 Nwi_2534 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319139.1 2753685 D 323098 CDS YP_319140.1 75676719 3676837 complement(2754061..2755725) 1 NC_007406.1 hypothetical protein 2755725 3676837 Nwi_2535 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319140.1 2754061 R 323098 CDS YP_319141.1 75676720 3676838 complement(2755737..2756177) 1 NC_007406.1 TadE-like protein 2756177 3676838 Nwi_2536 Nitrobacter winogradskyi Nb-255 TadE-like protein YP_319141.1 2755737 R 323098 CDS YP_319142.1 75676721 3676839 2756655..2757992 1 NC_007406.1 catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; beta alanine--pyruvate transaminase 2757992 3676839 Nwi_2537 Nitrobacter winogradskyi Nb-255 beta alanine--pyruvate transaminase YP_319142.1 2756655 D 323098 CDS YP_319143.1 75676722 3676840 2758112..2759551 1 NC_007406.1 diguanylate phophodiesterase 2759551 3676840 Nwi_2538 Nitrobacter winogradskyi Nb-255 diguanylate phophodiesterase YP_319143.1 2758112 D 323098 CDS YP_319144.1 75676723 3675254 2759567..2760421 1 NC_007406.1 HAD family hydrolase 2760421 3675254 Nwi_2539 Nitrobacter winogradskyi Nb-255 HAD family hydrolase YP_319144.1 2759567 D 323098 CDS YP_319145.1 75676724 3675255 complement(2760479..2760874) 1 NC_007406.1 response regulator receiver 2760874 3675255 Nwi_2540 Nitrobacter winogradskyi Nb-255 response regulator receiver YP_319145.1 2760479 R 323098 CDS YP_319146.1 75676725 3675256 2761142..2762125 1 NC_007406.1 riboflavin kinase/FAD synthetase 2762125 3675256 Nwi_2541 Nitrobacter winogradskyi Nb-255 riboflavin kinase/FAD synthetase YP_319146.1 2761142 D 323098 CDS YP_319147.1 75676726 3675257 2762248..2765247 1 NC_007406.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 2765247 ileS 3675257 ileS Nitrobacter winogradskyi Nb-255 isoleucyl-tRNA synthetase YP_319147.1 2762248 D 323098 CDS YP_319148.1 75676727 3675258 2765244..2765741 1 NC_007406.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 2765741 3675258 Nwi_2543 Nitrobacter winogradskyi Nb-255 lipoprotein signal peptidase YP_319148.1 2765244 D 323098 CDS YP_319149.1 75676728 3675259 2765820..2766539 1 NC_007406.1 hypothetical protein 2766539 3675259 Nwi_2544 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319149.1 2765820 D 323098 CDS YP_319150.1 75676729 3675260 2767123..2768517 1 NC_007406.1 peptidase M16 2768517 3675260 Nwi_2545 Nitrobacter winogradskyi Nb-255 peptidase M16 YP_319150.1 2767123 D 323098 CDS YP_319151.1 75676730 3675261 2768514..2769908 1 NC_007406.1 peptidase M16 2769908 3675261 Nwi_2546 Nitrobacter winogradskyi Nb-255 peptidase M16 YP_319151.1 2768514 D 323098 CDS YP_319152.1 75676731 3675262 2770154..2770573 1 NC_007406.1 peptidyl-tRNA hydrolase domain-containing protein 2770573 3675262 Nwi_2547 Nitrobacter winogradskyi Nb-255 peptidyl-tRNA hydrolase domain-containing protein YP_319152.1 2770154 D 323098 CDS YP_319153.1 75676732 3675263 2770877..2772688 1 NC_007406.1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 2772688 mutL 3675263 mutL Nitrobacter winogradskyi Nb-255 DNA mismatch repair protein YP_319153.1 2770877 D 323098 CDS YP_319154.1 75676733 3675264 complement(2772792..2773346) 1 NC_007406.1 hypothetical protein 2773346 3675264 Nwi_2549 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319154.1 2772792 R 323098 CDS YP_319155.1 75676734 3675265 complement(2773349..2775391) 1 NC_007406.1 pseudouridine synthase 2775391 3675265 Nwi_2550 Nitrobacter winogradskyi Nb-255 pseudouridine synthase YP_319155.1 2773349 R 323098 CDS YP_319156.1 75676735 3675266 2775668..2776114 1 NC_007406.1 cytidine/deoxycytidylate deaminase 2776114 3675266 Nwi_2551 Nitrobacter winogradskyi Nb-255 cytidine/deoxycytidylate deaminase YP_319156.1 2775668 D 323098 CDS YP_319157.1 75676736 3675267 complement(2776124..2777404) 1 NC_007406.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 2777404 3675267 Nwi_2552 Nitrobacter winogradskyi Nb-255 phosphoribosylamine--glycine ligase YP_319157.1 2776124 R 323098 CDS YP_319158.1 75676737 3675268 2777486..2779111 1 NC_007406.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 2779111 xseA 3675268 xseA Nitrobacter winogradskyi Nb-255 exodeoxyribonuclease VII large subunit YP_319158.1 2777486 D 323098 CDS YP_319159.1 75676738 3675269 2779133..2779492 1 NC_007406.1 hypothetical protein 2779492 3675269 Nwi_2554 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319159.1 2779133 D 323098 CDS YP_319160.1 75676739 3675270 complement(2779510..2780523) 1 NC_007406.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 2780523 lpxK 3675270 lpxK Nitrobacter winogradskyi Nb-255 tetraacyldisaccharide 4'-kinase YP_319160.1 2779510 R 323098 CDS YP_319161.1 75676740 3675271 complement(2780516..2781808) 1 NC_007406.1 3-deoxy-D-manno-octulosonic-acid transferase 2781808 3675271 Nwi_2556 Nitrobacter winogradskyi Nb-255 3-deoxy-D-manno-octulosonic-acid transferase YP_319161.1 2780516 R 323098 CDS YP_319162.1 75676741 3675272 complement(2781813..2782547) 1 NC_007406.1 hypothetical protein 2782547 3675272 Nwi_2557 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319162.1 2781813 R 323098 CDS YP_319163.1 75676742 3675216 complement(2782544..2782795) 1 NC_007406.1 hypothetical protein 2782795 3675216 Nwi_2558 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319163.1 2782544 R 323098 CDS YP_319164.1 75676743 3675217 complement(2782857..2783684) 1 NC_007406.1 inositol monophosphatase 2783684 3675217 Nwi_2559 Nitrobacter winogradskyi Nb-255 inositol monophosphatase YP_319164.1 2782857 R 323098 CDS YP_319165.1 75676744 3675218 complement(2783671..2785110) 1 NC_007406.1 C69 family peptidase 2785110 3675218 Nwi_2560 Nitrobacter winogradskyi Nb-255 C69 family peptidase YP_319165.1 2783671 R 323098 CDS YP_319166.1 75676745 3675219 2785344..2785865 1 NC_007406.1 hypothetical protein 2785865 3675219 Nwi_2561 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319166.1 2785344 D 323098 CDS YP_319167.1 75676746 3675220 complement(2785932..2786855) 1 NC_007406.1 UbiA prenyltransferase catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; 4-hydroxybenzoate polyprenyltransferase 2786855 ubiA 3675220 ubiA Nitrobacter winogradskyi Nb-255 4-hydroxybenzoate polyprenyltransferase YP_319167.1 2785932 R 323098 CDS YP_319168.1 75676747 3675221 complement(2786866..2787636) 1 NC_007406.1 hypothetical protein 2787636 3675221 Nwi_2563 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319168.1 2786866 R 323098 CDS YP_319169.1 75676748 3675222 2787924..2788697 1 NC_007406.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 2788697 3675222 Nwi_2564 Nitrobacter winogradskyi Nb-255 16S ribosomal RNA methyltransferase RsmE YP_319169.1 2787924 D 323098 CDS YP_319170.1 75676749 3675223 2788825..2789997 1 NC_007406.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase 2789997 hisZ 3675223 hisZ Nitrobacter winogradskyi Nb-255 ATP phosphoribosyltransferase YP_319170.1 2788825 D 323098 CDS YP_319171.1 75676750 3675224 2789994..2790971 1 NC_007406.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 2790971 hisG 3675224 hisG Nitrobacter winogradskyi Nb-255 ATP phosphoribosyltransferase YP_319171.1 2789994 D 323098 CDS YP_319172.1 75676751 3675225 2791054..2792100 1 NC_007406.1 glycosyl transferase 2792100 3675225 Nwi_2567 Nitrobacter winogradskyi Nb-255 glycosyl transferase YP_319172.1 2791054 D 323098 CDS YP_319173.1 75676752 3675226 2792097..2792972 1 NC_007406.1 protein YebG 2792972 3675226 Nwi_2568 Nitrobacter winogradskyi Nb-255 protein YebG YP_319173.1 2792097 D 323098 CDS YP_319174.1 75676753 3675227 2793088..2793885 1 NC_007406.1 hypothetical protein 2793885 3675227 Nwi_2569 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319174.1 2793088 D 323098 CDS YP_319175.1 75676754 3675228 complement(2793995..2794846) 1 NC_007406.1 ErfK/YbiS/YcfS/YnhG 2794846 3675228 Nwi_2570 Nitrobacter winogradskyi Nb-255 ErfK/YbiS/YcfS/YnhG YP_319175.1 2793995 R 323098 CDS YP_319176.1 75676755 3675229 2795091..2795870 1 NC_007406.1 hypothetical protein 2795870 3675229 Nwi_2571 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319176.1 2795091 D 323098 CDS YP_319177.1 75676756 3675230 complement(2795911..2796426) 1 NC_007406.1 hypothetical protein 2796426 3675230 Nwi_2572 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319177.1 2795911 R 323098 CDS YP_319178.1 75676757 3675231 2796735..2797031 1 NC_007406.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 2797031 groES 3675231 groES Nitrobacter winogradskyi Nb-255 co-chaperonin GroES YP_319178.1 2796735 D 323098 CDS YP_319179.1 75676758 3675232 2797175..2798821 1 NC_007406.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; the rhizobia have multiple copies of the groEL gene which are active under different environmental conditions; the S. meliloti protein in this cluster is not associated with a groES gene; molecular chaperone GroEL 2798821 groEL 3675232 groEL Nitrobacter winogradskyi Nb-255 molecular chaperone GroEL YP_319179.1 2797175 D 323098 CDS YP_319180.1 75676759 3675233 2798927..2800126 1 NC_007406.1 hypothetical protein 2800126 3675233 Nwi_2575 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319180.1 2798927 D 323098 CDS YP_319181.1 75676760 3675234 2800259..2801221 1 NC_007406.1 hypothetical protein 2801221 3675234 Nwi_2576 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319181.1 2800259 D 323098 CDS YP_319182.1 75676761 3675235 complement(2801313..2801720) 1 NC_007406.1 hypothetical protein 2801720 3675235 Nwi_2577 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319182.1 2801313 R 323098 CDS YP_319183.1 75676762 3675612 complement(2802070..2802528) 1 NC_007406.1 hypothetical protein 2802528 3675612 Nwi_2578 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319183.1 2802070 R 323098 CDS YP_319184.1 75676763 3675613 complement(2802564..2803877) 1 NC_007406.1 4Fe-4S ferredoxin 2803877 3675613 Nwi_2579 Nitrobacter winogradskyi Nb-255 4Fe-4S ferredoxin YP_319184.1 2802564 R 323098 CDS YP_319185.1 75676764 3675614 complement(2803874..2805124) 1 NC_007406.1 FAD linked oxidase 2805124 3675614 Nwi_2580 Nitrobacter winogradskyi Nb-255 FAD linked oxidase YP_319185.1 2803874 R 323098 CDS YP_319186.1 75676765 3675615 complement(2805170..2806663) 1 NC_007406.1 FAD linked oxidase 2806663 3675615 Nwi_2581 Nitrobacter winogradskyi Nb-255 FAD linked oxidase YP_319186.1 2805170 R 323098 CDS YP_319187.1 75676766 3675616 2807013..2807414 1 NC_007406.1 cytochrome c, class I 2807414 3675616 Nwi_2582 Nitrobacter winogradskyi Nb-255 cytochrome c, class I YP_319187.1 2807013 D 323098 CDS YP_319188.1 75676767 3675617 complement(2807424..2808104) 1 NC_007406.1 TetR family transcriptional regulator 2808104 3675617 Nwi_2583 Nitrobacter winogradskyi Nb-255 TetR family transcriptional regulator YP_319188.1 2807424 R 323098 CDS YP_319189.1 75676768 3675618 complement(2808382..2808537) 1 NC_007406.1 hypothetical protein 2808537 3675618 Nwi_2584 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319189.1 2808382 R 323098 CDS YP_319190.1 75676769 3675619 2808796..2809173 1 NC_007406.1 hypothetical protein 2809173 3675619 Nwi_2585 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319190.1 2808796 D 323098 CDS YP_319191.1 75676770 3675620 complement(2809191..2811374) 1 NC_007406.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 2811374 glyS 3675620 glyS Nitrobacter winogradskyi Nb-255 glycyl-tRNA synthetase subunit beta YP_319191.1 2809191 R 323098 CDS YP_319192.1 75676771 3675621 complement(2811378..2812322) 1 NC_007406.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 2812322 glyQ 3675621 glyQ Nitrobacter winogradskyi Nb-255 glycyl-tRNA synthetase subunit alpha YP_319192.1 2811378 R 323098 CDS YP_319193.1 75676772 3675622 complement(2812515..2812703) 1 NC_007406.1 hypothetical protein 2812703 3675622 Nwi_2588 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319193.1 2812515 R 323098 CDS YP_319194.1 75676773 3675623 complement(2812821..2813699) 1 NC_007406.1 peptidase S49 2813699 3675623 Nwi_2589 Nitrobacter winogradskyi Nb-255 peptidase S49 YP_319194.1 2812821 R 323098 CDS YP_319195.1 75676774 3675019 complement(2813881..2814666) 1 NC_007406.1 methyltransferase small 2814666 3675019 Nwi_2590 Nitrobacter winogradskyi Nb-255 methyltransferase small YP_319195.1 2813881 R 323098 CDS YP_319196.1 75676775 3675020 complement(2814647..2814901) 1 NC_007406.1 hypothetical protein 2814901 3675020 Nwi_2591 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319196.1 2814647 R 323098 CDS YP_319197.1 75676776 3675021 2815046..2816056 1 NC_007406.1 polyprenyl synthetase 2816056 3675021 Nwi_2592 Nitrobacter winogradskyi Nb-255 polyprenyl synthetase YP_319197.1 2815046 D 323098 CDS YP_319198.1 75676777 3675022 complement(2816111..2817037) 1 NC_007406.1 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2817037 3675022 Nwi_2593 Nitrobacter winogradskyi Nb-255 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_319198.1 2816111 R 323098 CDS YP_319199.1 75676778 3675023 complement(2817155..2819008) 1 NC_007406.1 TPR repeat-containing protein 2819008 3675023 Nwi_2594 Nitrobacter winogradskyi Nb-255 TPR repeat-containing protein YP_319199.1 2817155 R 323098 CDS YP_319200.1 75676779 3675024 complement(2819212..2820873) 1 NC_007406.1 FAD dependent oxidoreductase 2820873 3675024 Nwi_2595 Nitrobacter winogradskyi Nb-255 FAD dependent oxidoreductase YP_319200.1 2819212 R 323098 CDS YP_319201.1 75676780 3675025 2821077..2821982 1 NC_007406.1 phage SPO1 DNA polymerase-related protein 2821982 3675025 Nwi_2596 Nitrobacter winogradskyi Nb-255 phage SPO1 DNA polymerase-related protein YP_319201.1 2821077 D 323098 CDS YP_319202.1 75676781 3675942 complement(2821992..2823560) 1 NC_007406.1 hypothetical protein 2823560 3675942 Nwi_2597 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319202.1 2821992 R 323098 CDS YP_319203.1 75676782 3675943 complement(2823769..2824545) 1 NC_007406.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 2824545 rnhB 3675943 rnhB Nitrobacter winogradskyi Nb-255 ribonuclease HII YP_319203.1 2823769 R 323098 CDS YP_319204.1 75676783 3675944 2824652..2824981 1 NC_007406.1 small multidrug resistance protein 2824981 3675944 Nwi_2599 Nitrobacter winogradskyi Nb-255 small multidrug resistance protein YP_319204.1 2824652 D 323098 CDS YP_319205.1 75676784 3675945 complement(2825032..2826192) 1 NC_007406.1 DNA repair photolyase 2826192 3675945 Nwi_2600 Nitrobacter winogradskyi Nb-255 DNA repair photolyase YP_319205.1 2825032 R 323098 CDS YP_319206.1 75676785 3675946 complement(2826259..2826822) 1 NC_007406.1 molybdopterin biosynthesis protein B 2826822 3675946 Nwi_2601 Nitrobacter winogradskyi Nb-255 molybdopterin biosynthesis protein B YP_319206.1 2826259 R 323098 CDS YP_319207.1 75676786 3675947 complement(2826836..2827762) 1 NC_007406.1 hypothetical protein 2827762 3675947 Nwi_2602 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319207.1 2826836 R 323098 CDS YP_319208.1 75676787 3675948 2828342..2829472 1 NC_007406.1 DNA methylase N-4/N-6 2829472 3675948 Nwi_2603 Nitrobacter winogradskyi Nb-255 DNA methylase N-4/N-6 YP_319208.1 2828342 D 323098 CDS YP_319209.1 75676788 3674927 2829832..2830515 1 NC_007406.1 glutathione S-transferase 2830515 3674927 Nwi_2604 Nitrobacter winogradskyi Nb-255 glutathione S-transferase YP_319209.1 2829832 D 323098 CDS YP_319210.1 75676789 3675059 complement(2830554..2831801) 1 NC_007406.1 A/G-specific adenine glycosylase 2831801 3675059 Nwi_2605 Nitrobacter winogradskyi Nb-255 A/G-specific adenine glycosylase YP_319210.1 2830554 R 323098 CDS YP_319211.1 75676790 3675060 2831840..2832469 1 NC_007406.1 hypothetical protein 2832469 3675060 Nwi_2606 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319211.1 2831840 D 323098 CDS YP_319212.1 75676791 3675061 2832580..2833242 1 NC_007406.1 protein-disulfide isomerase 2833242 3675061 Nwi_2607 Nitrobacter winogradskyi Nb-255 protein-disulfide isomerase YP_319212.1 2832580 D 323098 CDS YP_319213.1 75676792 3675062 2833474..2836980 1 NC_007406.1 chromosome segregation protein SMC 2836980 3675062 Nwi_2608 Nitrobacter winogradskyi Nb-255 chromosome segregation protein SMC YP_319213.1 2833474 D 323098 CDS YP_319214.1 75676793 3675063 2837017..2838063 1 NC_007406.1 hypothetical protein 2838063 3675063 Nwi_2609 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319214.1 2837017 D 323098 CDS YP_319215.1 75676794 3675064 complement(2838075..2838503) 1 NC_007406.1 hypothetical protein 2838503 3675064 Nwi_2610 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319215.1 2838075 R 323098 CDS YP_319216.1 75676795 3675065 2838688..2839248 1 NC_007406.1 hypothetical protein 2839248 3675065 Nwi_2611 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319216.1 2838688 D 323098 CDS YP_319217.1 75676796 3675066 2839351..2840502 1 NC_007406.1 peptidase M48, Ste24p 2840502 3675066 Nwi_2612 Nitrobacter winogradskyi Nb-255 peptidase M48, Ste24p YP_319217.1 2839351 D 323098 CDS YP_319218.1 75676797 3675067 complement(2840551..2841090) 1 NC_007406.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 2841090 3675067 Nwi_2613 Nitrobacter winogradskyi Nb-255 adenine phosphoribosyltransferase YP_319218.1 2840551 R 323098 CDS YP_319219.1 75676798 3675068 complement(2841237..2843420) 1 NC_007406.1 trpE(G); catalyzes the formation of anthranilate from chorismate and glutamine; contains both component I and II; anthranilate synthase 2843420 3675068 Nwi_2614 Nitrobacter winogradskyi Nb-255 anthranilate synthase YP_319219.1 2841237 R 323098 CDS YP_319220.1 75676799 3675069 2843615..2844358 1 NC_007406.1 hypothetical protein 2844358 3675069 Nwi_2615 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319220.1 2843615 D 323098 CDS YP_319221.1 75676800 3675070 complement(2844592..2846655) 1 NC_007406.1 cytochrome c1 2846655 3675070 Nwi_2616 Nitrobacter winogradskyi Nb-255 cytochrome c1 YP_319221.1 2844592 R 323098 CDS YP_319222.1 75676801 3674427 complement(2846707..2847234) 1 NC_007406.1 ubiquinol-cytochrome c reductase, iron-sulfur subunit 2847234 3674427 Nwi_2617 Nitrobacter winogradskyi Nb-255 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_319222.1 2846707 R 323098 CDS YP_319223.1 75676802 3674428 2847437..2847907 1 NC_007406.1 tRNA/rRNA methyltransferase SpoU 2847907 3674428 Nwi_2618 Nitrobacter winogradskyi Nb-255 tRNA/rRNA methyltransferase SpoU YP_319223.1 2847437 D 323098 CDS YP_319224.1 75676803 3674429 2847904..2848536 1 NC_007406.1 hypothetical protein 2848536 3674429 Nwi_2619 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319224.1 2847904 D 323098 CDS YP_319225.1 75676804 3674430 2848619..2848990 1 NC_007406.1 6-pyruvoyl tetrahydrobiopterin synthase 2848990 3674430 Nwi_2620 Nitrobacter winogradskyi Nb-255 6-pyruvoyl tetrahydrobiopterin synthase YP_319225.1 2848619 D 323098 CDS YP_319226.1 75676805 3674431 2849027..2849929 1 NC_007406.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 2849929 3674431 Nwi_2621 Nitrobacter winogradskyi Nb-255 coproporphyrinogen III oxidase YP_319226.1 2849027 D 323098 CDS YP_319227.1 75676806 3674432 complement(2849949..2851205) 1 NC_007406.1 polynucleotide adenylyltransferase 2851205 3674432 Nwi_2622 Nitrobacter winogradskyi Nb-255 polynucleotide adenylyltransferase YP_319227.1 2849949 R 323098 CDS YP_319228.1 75676807 3674433 complement(2851202..2851465) 1 NC_007406.1 hypothetical protein 2851465 3674433 Nwi_2623 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319228.1 2851202 R 323098 CDS YP_319229.1 75676808 3674434 complement(2851462..2852127) 1 NC_007406.1 NUDIX hydrolase 2852127 3674434 Nwi_2624 Nitrobacter winogradskyi Nb-255 NUDIX hydrolase YP_319229.1 2851462 R 323098 CDS YP_319230.1 75676809 3674435 complement(2852136..2852741) 1 NC_007406.1 hypothetical protein 2852741 3674435 Nwi_2625 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319230.1 2852136 R 323098 CDS YP_319231.1 75676810 3674436 2852988..2854001 1 NC_007406.1 ATPase 2854001 3674436 Nwi_2626 Nitrobacter winogradskyi Nb-255 ATPase YP_319231.1 2852988 D 323098 CDS YP_319232.1 75676811 3674437 2854001..2854942 1 NC_007406.1 hypothetical protein 2854942 3674437 Nwi_2627 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319232.1 2854001 D 323098 CDS YP_319233.1 75676812 3674438 2854939..2857752 1 NC_007406.1 hypothetical protein 2857752 3674438 Nwi_2628 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319233.1 2854939 D 323098 CDS YP_319234.1 75676813 3674439 2857762..2859825 1 NC_007406.1 hypothetical protein 2859825 3674439 Nwi_2629 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319234.1 2857762 D 323098 CDS YP_319235.1 75676814 3674440 2859996..2860421 1 NC_007406.1 hypothetical protein 2860421 3674440 Nwi_2630 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319235.1 2859996 D 323098 CDS YP_319236.1 75676815 3674441 2860548..2862947 1 NC_007406.1 TonB-dependent receptor 2862947 3674441 Nwi_2631 Nitrobacter winogradskyi Nb-255 TonB-dependent receptor YP_319236.1 2860548 D 323098 CDS YP_319237.1 75676816 3674442 complement(2863133..2863678) 1 NC_007406.1 N-acetyltransferase 2863678 3674442 Nwi_2632 Nitrobacter winogradskyi Nb-255 N-acetyltransferase YP_319237.1 2863133 R 323098 CDS YP_319238.1 75676817 3674443 complement(2863740..2864228) 1 NC_007406.1 NUDIX hydrolase 2864228 3674443 Nwi_2633 Nitrobacter winogradskyi Nb-255 NUDIX hydrolase YP_319238.1 2863740 R 323098 CDS YP_319239.1 75676818 3674444 2864455..2865360 1 NC_007406.1 metallophosphoesterase 2865360 3674444 Nwi_2634 Nitrobacter winogradskyi Nb-255 metallophosphoesterase YP_319239.1 2864455 D 323098 CDS YP_319240.1 75676819 3674445 complement(2865474..2865827) 1 NC_007406.1 hypothetical protein 2865827 3674445 Nwi_2635 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319240.1 2865474 R 323098 CDS YP_319241.1 75676820 3677212 2866268..2866765 1 NC_007406.1 hypothetical protein 2866765 3677212 Nwi_2636 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319241.1 2866268 D 323098 CDS YP_319242.1 75676821 3676306 2866750..2867019 1 NC_007406.1 hypothetical protein 2867019 3676306 Nwi_2637 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319242.1 2866750 D 323098 CDS YP_319243.1 75676822 3676307 complement(2867160..2867447) 1 NC_007406.1 hypothetical protein 2867447 3676307 Nwi_2638 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319243.1 2867160 R 323098 CDS YP_319244.1 75676823 3676308 complement(2867444..2867920) 1 NC_007406.1 glutathione peroxidase 2867920 3676308 Nwi_2639 Nitrobacter winogradskyi Nb-255 glutathione peroxidase YP_319244.1 2867444 R 323098 CDS YP_319245.1 75676824 3676309 complement(2867970..2868227) 1 NC_007406.1 hypothetical protein 2868227 3676309 Nwi_2640 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319245.1 2867970 R 323098 CDS YP_319246.1 75676825 3676310 2868473..2871370 1 NC_007406.1 catalyzes the reversible formation of D-erythrose 4-phosphate and D-fructose 6-phosphate from sedoheptulose 7-phosphate and D-glyceraldehyde 3-phosphate; catalyzes isomerization of glucose 6-phosphate and fructose 6-phosphate; bifunctional transaldolase/phosoglucose isomerase 2871370 3676310 Nwi_2641 Nitrobacter winogradskyi Nb-255 bifunctional transaldolase/phosoglucose isomerase YP_319246.1 2868473 D 323098 CDS YP_319247.1 75676826 3676311 2871632..2872648 1 NC_007406.1 similar to full-length Gnd, these proteins seems to have a truncated C-terminal 6PGD domainin; in Methylobacillus flagellatus this gene is essential for NAD+-dependent oxidation of 6-phosphogluconate; 6-phosphogluconate dehydrogenase 2872648 3676311 Nwi_2642 Nitrobacter winogradskyi Nb-255 6-phosphogluconate dehydrogenase YP_319247.1 2871632 D 323098 CDS YP_319248.1 75676827 3676312 2872645..2874159 1 NC_007406.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 2874159 3676312 Nwi_2643 Nitrobacter winogradskyi Nb-255 glucose-6-phosphate 1-dehydrogenase YP_319248.1 2872645 D 323098 CDS YP_319249.1 75676828 3676313 2874141..2874896 1 NC_007406.1 6-phosphogluconolactonase 2874896 3676313 Nwi_2644 Nitrobacter winogradskyi Nb-255 6-phosphogluconolactonase YP_319249.1 2874141 D 323098 CDS YP_319250.1 75676829 3676314 2874893..2875411 1 NC_007406.1 carbohydrate kinase 2875411 3676314 Nwi_2645 Nitrobacter winogradskyi Nb-255 carbohydrate kinase YP_319250.1 2874893 D 323098 CDS YP_319251.1 75676830 3676315 complement(2875634..2877523) 1 NC_007406.1 glycoside hydrolase 15-like protein 2877523 3676315 Nwi_2646 Nitrobacter winogradskyi Nb-255 glycoside hydrolase 15-like protein YP_319251.1 2875634 R 323098 CDS YP_319252.1 75676831 3676316 complement(2877682..2879658) 1 NC_007406.1 PAS sensor diguanylate cyclase/phophodiesterase 2879658 3676316 Nwi_2647 Nitrobacter winogradskyi Nb-255 PAS sensor diguanylate cyclase/phophodiesterase YP_319252.1 2877682 R 323098 CDS YP_319253.1 75676832 3676317 complement(2880044..2881015) 1 NC_007406.1 multicopper oxidase 2881015 3676317 Nwi_2648 Nitrobacter winogradskyi Nb-255 multicopper oxidase YP_319253.1 2880044 R 323098 CDS YP_319254.1 75676833 3676318 complement(2881041..2881397) 1 NC_007406.1 cytochrome c, class IC 2881397 3676318 Nwi_2649 Nitrobacter winogradskyi Nb-255 cytochrome c, class IC YP_319254.1 2881041 R 323098 CDS YP_319255.1 75676834 3676319 complement(2881397..2882074) 1 NC_007406.1 cytochrome c, class I 2882074 3676319 Nwi_2650 Nitrobacter winogradskyi Nb-255 cytochrome c, class I YP_319255.1 2881397 R 323098 CDS YP_319256.1 75676835 3676320 complement(2882098..2883174) 1 NC_007406.1 multicopper oxidase3 2883174 3676320 Nwi_2651 Nitrobacter winogradskyi Nb-255 multicopper oxidase3 YP_319256.1 2882098 R 323098 CDS YP_319257.1 75676836 3676321 complement(2883484..2884134) 1 NC_007406.1 cytochrome c biogenesis factor 2884134 3676321 Nwi_2652 Nitrobacter winogradskyi Nb-255 cytochrome c biogenesis factor YP_319257.1 2883484 R 323098 CDS YP_319258.1 75676837 3676322 complement(2884371..2884799) 1 NC_007406.1 hypothetical protein 2884799 3676322 Nwi_2653 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319258.1 2884371 R 323098 CDS YP_319259.1 75676838 3676323 2885067..2888009 1 NC_007406.1 subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; monovalent cation/H+ antiporter subunit A 2888009 3676323 Nwi_2654 Nitrobacter winogradskyi Nb-255 monovalent cation/H+ antiporter subunit A YP_319259.1 2885067 D 323098 CDS YP_319260.1 75676839 3676324 2888009..2888347 1 NC_007406.1 subunit C of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit C 2888347 3676324 Nwi_2655 Nitrobacter winogradskyi Nb-255 monovalent cation/H+ antiporter subunit C YP_319260.1 2888009 D 323098 CDS YP_319261.1 75676840 3675109 2888350..2889957 1 NC_007406.1 subunit D of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; contains an oxidoreductase domain; catalyzes the transfer of electrons from NADH to ubiquinone; monovalent cation/H+ antiporter subunit D 2889957 3675109 Nwi_2656 Nitrobacter winogradskyi Nb-255 monovalent cation/H+ antiporter subunit D YP_319261.1 2888350 D 323098 CDS YP_319262.1 75676841 3675110 2889954..2890442 1 NC_007406.1 subunit E of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit E 2890442 3675110 Nwi_2657 Nitrobacter winogradskyi Nb-255 monovalent cation/H+ antiporter subunit E YP_319262.1 2889954 D 323098 CDS YP_319263.1 75676842 3675111 2890439..2890717 1 NC_007406.1 subunit F of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; monovalent cation/H+ antiporter subunit F 2890717 phaF 3675111 phaF Nitrobacter winogradskyi Nb-255 monovalent cation/H+ antiporter subunit F YP_319263.1 2890439 D 323098 CDS YP_319264.1 75676843 3675112 2890714..2891073 1 NC_007406.1 subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; monovalent cation/H+ antiporter subunit G 2891073 3675112 Nwi_2659 Nitrobacter winogradskyi Nb-255 monovalent cation/H+ antiporter subunit G YP_319264.1 2890714 D 323098 CDS YP_319265.1 75676844 3675113 complement(2891179..2891583) 1 NC_007406.1 hypothetical protein 2891583 3675113 Nwi_2660 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319265.1 2891179 R 323098 CDS YP_319266.1 75676845 3675114 complement(2891617..2893728) 1 NC_007406.1 multicopper oxidase 2893728 3675114 Nwi_2661 Nitrobacter winogradskyi Nb-255 multicopper oxidase YP_319266.1 2891617 R 323098 CDS YP_319267.1 75676846 3675115 complement(2894397..2895257) 1 NC_007406.1 short-chain dehydrogenase/reductase SDR 2895257 3675115 Nwi_2662 Nitrobacter winogradskyi Nb-255 short-chain dehydrogenase/reductase SDR YP_319267.1 2894397 R 323098 CDS YP_319268.1 75676847 3675116 2895706..2896314 1 NC_007406.1 isochorismatase hydrolase 2896314 3675116 Nwi_2663 Nitrobacter winogradskyi Nb-255 isochorismatase hydrolase YP_319268.1 2895706 D 323098 CDS YP_319269.1 75676848 3675117 2896380..2896877 1 NC_007406.1 hypothetical protein 2896877 3675117 Nwi_2664 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319269.1 2896380 D 323098 CDS YP_319270.1 75676849 3675118 complement(2897131..2898111) 1 NC_007406.1 Fis family transcriptional regulator 2898111 3675118 Nwi_2665 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_319270.1 2897131 R 323098 CDS YP_319271.1 75676850 3675119 complement(2898108..2898482) 1 NC_007406.1 transposase IS3/IS911 2898482 3675119 Nwi_2666 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_319271.1 2898108 R 323098 CDS YP_319272.1 75676851 3675120 complement(2899244..2899522) 1 NC_007406.1 hypothetical protein 2899522 3675120 Nwi_2667 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319272.1 2899244 R 323098 CDS YP_319273.1 75676852 3675121 complement(2899607..2900695) 1 NC_007406.1 hypothetical protein 2900695 3675121 Nwi_2668 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319273.1 2899607 R 323098 CDS YP_319274.1 75676853 3675122 complement(2900685..2903147) 1 NC_007406.1 hypothetical protein 2903147 3675122 Nwi_2669 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319274.1 2900685 R 323098 CDS YP_319275.1 75676854 3675123 complement(2903144..2903854) 1 NC_007406.1 ABC transporter ATPase 2903854 3675123 Nwi_2670 Nitrobacter winogradskyi Nb-255 ABC transporter ATPase YP_319275.1 2903144 R 323098 CDS YP_319276.1 75676855 3675124 complement(2904115..2904657) 1 NC_007406.1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 2904657 3675124 Nwi_2671 Nitrobacter winogradskyi Nb-255 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_319276.1 2904115 R 323098 CDS YP_319277.1 75676856 3675125 2904779..2905114 1 NC_007406.1 hypothetical protein 2905114 3675125 Nwi_2672 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319277.1 2904779 D 323098 CDS YP_319278.1 75676857 3675126 2905644..2906018 1 NC_007406.1 transposase IS3/IS911 2906018 3675126 Nwi_2673 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_319278.1 2905644 D 323098 CDS YP_319279.1 75676858 3675127 2906015..2906995 1 NC_007406.1 Fis family transcriptional regulator 2906995 3675127 Nwi_2674 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_319279.1 2906015 D 323098 CDS YP_319280.1 75676859 3675534 2907069..2908019 1 NC_007406.1 glutathione S-transferase 2908019 3675534 Nwi_2675 Nitrobacter winogradskyi Nb-255 glutathione S-transferase YP_319280.1 2907069 D 323098 CDS YP_319281.1 75676860 3675535 complement(2908173..2908826) 1 NC_007406.1 hypothetical protein 2908826 3675535 Nwi_2676 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319281.1 2908173 R 323098 CDS YP_319282.1 75676861 3675536 complement(2909167..2909475) 1 NC_007406.1 hypothetical protein 2909475 3675536 Nwi_2677 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319282.1 2909167 R 323098 CDS YP_319283.1 75676862 3675537 complement(2909616..2909804) 1 NC_007406.1 hypothetical protein 2909804 3675537 Nwi_2678 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319283.1 2909616 R 323098 CDS YP_319284.1 75676863 3675538 complement(2909931..2910527) 1 NC_007406.1 hypothetical protein 2910527 3675538 Nwi_2679 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319284.1 2909931 R 323098 CDS YP_319285.1 75676864 3675539 2910790..2911851 1 NC_007406.1 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein 2911851 3675539 Nwi_2680 Nitrobacter winogradskyi Nb-255 nitrate/sulfonate/bicarbonate ABC transporter periplasmic protein YP_319285.1 2910790 D 323098 CDS YP_319286.1 75676865 3675540 2912042..2913922 1 NC_007406.1 responsible for transport of beta-1,2-glucans from the cytoplasm to periplasm; inner membrane ABC transporter permease component; Cgt; ChvA; NdvA; cyclic beta-1,2-glucan ABC transporter 2913922 3675540 Nwi_2681 Nitrobacter winogradskyi Nb-255 cyclic beta-1,2-glucan ABC transporter YP_319286.1 2912042 D 323098 CDS YP_319287.1 75676866 3675541 2914163..2915530 1 NC_007406.1 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 2915530 3675541 Nwi_2682 Nitrobacter winogradskyi Nb-255 peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 YP_319287.1 2914163 D 323098 CDS YP_319288.1 75676867 3675542 complement(2916104..2916550) 1 NC_007406.1 universal stress protein UspA 2916550 3675542 Nwi_2683 Nitrobacter winogradskyi Nb-255 universal stress protein UspA YP_319288.1 2916104 R 323098 CDS YP_319289.1 75676868 3675543 2916966..2918669 1 NC_007406.1 activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 2918669 3675543 Nwi_2684 Nitrobacter winogradskyi Nb-255 long-chain-fatty-acid--CoA ligase YP_319289.1 2916966 D 323098 CDS YP_319290.1 75676869 3675544 2918704..2919318 1 NC_007406.1 hypothetical protein 2919318 3675544 Nwi_2685 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319290.1 2918704 D 323098 CDS YP_319291.1 75676870 3675545 2919452..2919937 1 NC_007406.1 alkyl hydroperoxide reductase 2919937 3675545 Nwi_2686 Nitrobacter winogradskyi Nb-255 alkyl hydroperoxide reductase YP_319291.1 2919452 D 323098 CDS YP_319292.1 75676871 3675546 complement(2920007..2920471) 1 NC_007406.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 2920471 rnhA 3675546 rnhA Nitrobacter winogradskyi Nb-255 ribonuclease H YP_319292.1 2920007 R 323098 CDS YP_319293.1 75676872 3675547 complement(2920468..2921448) 1 NC_007406.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine; homoserine kinase 2921448 3675547 Nwi_2688 Nitrobacter winogradskyi Nb-255 homoserine kinase YP_319293.1 2920468 R 323098 CDS YP_319294.1 75676873 3675548 complement(2921580..2922569) 1 NC_007406.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2922569 ispH 3675548 ispH Nitrobacter winogradskyi Nb-255 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_319294.1 2921580 R 323098 CDS YP_319295.1 75676874 3675549 2922773..2923474 1 NC_007406.1 hypothetical protein 2923474 3675549 Nwi_2690 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319295.1 2922773 D 323098 CDS YP_319296.1 75676875 3675550 complement(2923614..2923970) 1 NC_007406.1 hypothetical protein 2923970 3675550 Nwi_2691 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319296.1 2923614 R 323098 CDS YP_319297.1 75676876 3675551 complement(2924268..2925353) 1 NC_007406.1 class II aldolase; catalyzes the reversible aldol condensation of dihydroxyacetonephosphate and glyceraldehyde 3-phosphate in the Calvin cycle, glycolysis and gluconeogenesis; fructose-1,6-bisphosphate aldolase 2925353 3675551 Nwi_2692 Nitrobacter winogradskyi Nb-255 fructose-1,6-bisphosphate aldolase YP_319297.1 2924268 R 323098 CDS YP_319298.1 75676877 3675552 complement(2925475..2926347) 1 NC_007406.1 phosphoribulokinase/uridine kinase 2926347 3675552 Nwi_2693 Nitrobacter winogradskyi Nb-255 phosphoribulokinase/uridine kinase YP_319298.1 2925475 R 323098 CDS YP_319299.1 75676878 3675553 complement(2926360..2927397) 1 NC_007406.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 2927397 3675553 Nwi_2694 Nitrobacter winogradskyi Nb-255 fructose-1,6-bisphosphatase YP_319299.1 2926360 R 323098 CDS YP_319300.1 75676879 3675698 2927526..2928464 1 NC_007406.1 LysR family transcriptional regulator 2928464 3675698 Nwi_2695 Nitrobacter winogradskyi Nb-255 LysR family transcriptional regulator YP_319300.1 2927526 D 323098 CDS YP_319301.1 75676880 3675700 2928685..2929671 1 NC_007406.1 Sua5/YciO/YrdC/YwlC 2929671 3675700 Nwi_2696 Nitrobacter winogradskyi Nb-255 Sua5/YciO/YrdC/YwlC YP_319301.1 2928685 D 323098 CDS YP_319302.1 75676881 3675701 2929671..2931113 1 NC_007406.1 FAD linked oxidase 2931113 3675701 Nwi_2697 Nitrobacter winogradskyi Nb-255 FAD linked oxidase YP_319302.1 2929671 D 323098 CDS YP_319303.1 75676882 3675702 complement(2931176..2931943) 1 NC_007406.1 hypothetical protein 2931943 3675702 Nwi_2698 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319303.1 2931176 R 323098 CDS YP_319304.1 75676883 3675703 2932007..2932519 1 NC_007406.1 hypothetical protein 2932519 3675703 Nwi_2699 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319304.1 2932007 D 323098 CDS YP_319305.1 75676884 3675704 2932519..2932935 1 NC_007406.1 NUDIX hydrolase 2932935 3675704 Nwi_2700 Nitrobacter winogradskyi Nb-255 NUDIX hydrolase YP_319305.1 2932519 D 323098 CDS YP_319306.1 75676885 3675705 2932907..2933398 1 NC_007406.1 hypothetical protein 2933398 3675705 Nwi_2701 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319306.1 2932907 D 323098 CDS YP_319307.1 75676886 3675706 2933590..2933856 1 NC_007406.1 hypothetical protein 2933856 3675706 Nwi_2702 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319307.1 2933590 D 323098 CDS YP_319308.1 75676887 3675707 complement(2934012..2935340) 1 NC_007406.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 2935340 3675707 Nwi_2703 Nitrobacter winogradskyi Nb-255 dihydroorotase YP_319308.1 2934012 R 323098 CDS YP_319309.1 75676888 3675708 2935514..2936395 1 NC_007406.1 glycine cleavage T protein (aminomethyl transferase) 2936395 3675708 Nwi_2704 Nitrobacter winogradskyi Nb-255 glycine cleavage T protein (aminomethyl transferase) YP_319309.1 2935514 D 323098 CDS YP_319310.1 75676889 3675709 2936392..2937018 1 NC_007406.1 DNA-3-methyladenine glycosylase I 2937018 3675709 Nwi_2705 Nitrobacter winogradskyi Nb-255 DNA-3-methyladenine glycosylase I YP_319310.1 2936392 D 323098 CDS YP_319311.1 75676890 3675710 2937015..2937626 1 NC_007406.1 metal dependent phosphohydrolase 2937626 3675710 Nwi_2706 Nitrobacter winogradskyi Nb-255 metal dependent phosphohydrolase YP_319311.1 2937015 D 323098 CDS YP_319312.1 75676891 3675711 complement(2937705..2938301) 1 NC_007406.1 hypothetical protein 2938301 3675711 Nwi_2707 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319312.1 2937705 R 323098 CDS YP_319313.1 75676892 3675712 complement(2938598..2939980) 1 NC_007406.1 cell wall hydrolase SleB 2939980 3675712 Nwi_2708 Nitrobacter winogradskyi Nb-255 cell wall hydrolase SleB YP_319313.1 2938598 R 323098 CDS YP_319314.1 75676893 3675713 complement(2940410..2943496) 1 NC_007406.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate phosphate dikinase 2943496 3675713 Nwi_2709 Nitrobacter winogradskyi Nb-255 pyruvate phosphate dikinase YP_319314.1 2940410 R 323098 CDS YP_319315.1 75676894 3674874 complement(2943582..2945504) 1 NC_007406.1 peptidase M41, FtsH 2945504 3674874 Nwi_2710 Nitrobacter winogradskyi Nb-255 peptidase M41, FtsH YP_319315.1 2943582 R 323098 CDS YP_319316.1 75676895 3676849 complement(2945691..2946806) 1 NC_007406.1 tRNA(Ile)-lysidine synthase 2946806 3676849 Nwi_2711 Nitrobacter winogradskyi Nb-255 tRNA(Ile)-lysidine synthase YP_319316.1 2945691 R 323098 CDS YP_319317.1 75676896 3674601 complement(2946793..2947020) 1 NC_007406.1 hypothetical protein 2947020 3674601 Nwi_2712 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319317.1 2946793 R 323098 CDS YP_319318.1 75676897 3674602 complement(2947158..2948075) 1 NC_007406.1 hypothetical protein 2948075 3674602 Nwi_2713 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319318.1 2947158 R 323098 CDS YP_319319.1 75676898 3674603 complement(2948445..2948948) 1 NC_007406.1 OmpA/MotB 2948948 3674603 Nwi_2714 Nitrobacter winogradskyi Nb-255 OmpA/MotB YP_319319.1 2948445 R 323098 CDS YP_319320.1 75676899 3674604 complement(2949175..2949921) 1 NC_007406.1 hypothetical protein 2949921 3674604 Nwi_2715 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319320.1 2949175 R 323098 CDS YP_319321.1 75676900 3674605 complement(2950321..2952657) 1 NC_007406.1 diguanylate cyclase/phophodiesterase 2952657 3674605 Nwi_2716 Nitrobacter winogradskyi Nb-255 diguanylate cyclase/phophodiesterase YP_319321.1 2950321 R 323098 CDS YP_319322.1 75676901 3674606 complement(2953068..2954420) 1 NC_007406.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 2954420 tolB 3674606 tolB Nitrobacter winogradskyi Nb-255 translocation protein TolB YP_319322.1 2953068 R 323098 CDS YP_319323.1 75676902 3674607 complement(2954463..2955515) 1 NC_007406.1 hypothetical protein 2955515 3674607 Nwi_2718 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319323.1 2954463 R 323098 CDS YP_319324.1 75676903 3674608 complement(2955518..2955973) 1 NC_007406.1 biopolymer transport protein ExbD/TolR 2955973 3674608 Nwi_2719 Nitrobacter winogradskyi Nb-255 biopolymer transport protein ExbD/TolR YP_319324.1 2955518 R 323098 CDS YP_319325.1 75676904 3674609 complement(2956005..2956718) 1 NC_007406.1 MotA/TolQ/ExbB proton channel 2956718 3674609 Nwi_2720 Nitrobacter winogradskyi Nb-255 MotA/TolQ/ExbB proton channel YP_319325.1 2956005 R 323098 CDS YP_319326.1 75676905 3674610 complement(2957140..2957628) 1 NC_007406.1 hypothetical protein 2957628 3674610 Nwi_2721 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319326.1 2957140 R 323098 CDS YP_319327.1 75676906 3674611 complement(2957895..2958608) 1 NC_007406.1 TetR family transcriptional regulator 2958608 3674611 Nwi_2722 Nitrobacter winogradskyi Nb-255 TetR family transcriptional regulator YP_319327.1 2957895 R 323098 CDS YP_319328.1 75676907 3674612 complement(2958773..2959234) 1 NC_007406.1 4-hydroxybenzoyl-CoA thioesterase 2959234 3674612 Nwi_2723 Nitrobacter winogradskyi Nb-255 4-hydroxybenzoyl-CoA thioesterase YP_319328.1 2958773 R 323098 CDS YP_319329.1 75676908 3674613 complement(2959231..2960277) 1 NC_007406.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 2960277 ruvB 3674613 ruvB Nitrobacter winogradskyi Nb-255 Holliday junction DNA helicase RuvB YP_319329.1 2959231 R 323098 CDS YP_319330.1 75676909 3674614 complement(2960274..2960891) 1 NC_007406.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 2960891 ruvA 3674614 ruvA Nitrobacter winogradskyi Nb-255 Holliday junction DNA helicase RuvA YP_319330.1 2960274 R 323098 CDS YP_319331.1 75676910 3674615 complement(2960917..2961435) 1 NC_007406.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 2961435 ruvC 3674615 ruvC Nitrobacter winogradskyi Nb-255 Holliday junction resolvase YP_319331.1 2960917 R 323098 CDS YP_319332.1 75676911 3674616 2961764..2962372 1 NC_007406.1 hypothetical protein 2962372 3674616 Nwi_2727 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319332.1 2961764 D 323098 CDS YP_319333.1 75676912 3674617 complement(2962436..2963806) 1 NC_007406.1 divalent cation transporter 2963806 3674617 Nwi_2728 Nitrobacter winogradskyi Nb-255 divalent cation transporter YP_319333.1 2962436 R 323098 CDS YP_319334.1 75676913 3674618 complement(2964112..2964858) 1 NC_007406.1 hypothetical protein 2964858 3674618 Nwi_2729 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319334.1 2964112 R 323098 CDS YP_319335.1 75676914 3674619 complement(2965032..2965853) 1 NC_007406.1 hypothetical protein 2965853 3674619 Nwi_2730 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319335.1 2965032 R 323098 CDS YP_319336.1 75676915 3676325 complement(2965857..2966444) 1 NC_007406.1 5-formyltetrahydrofolate cyclo-ligase 2966444 3676325 Nwi_2731 Nitrobacter winogradskyi Nb-255 5-formyltetrahydrofolate cyclo-ligase YP_319336.1 2965857 R 323098 CDS YP_319337.1 75676916 3676326 complement(2966934..2967317) 1 NC_007406.1 hypothetical protein 2967317 3676326 Nwi_2732 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319337.1 2966934 R 323098 CDS YP_319338.1 75676917 3676327 complement(2967314..2967649) 1 NC_007406.1 hypothetical protein 2967649 3676327 Nwi_2733 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319338.1 2967314 R 323098 CDS YP_319339.1 75676918 3676328 2967933..2969918 1 NC_007406.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 2969918 3676328 Nwi_2734 Nitrobacter winogradskyi Nb-255 transketolase YP_319339.1 2967933 D 323098 CDS YP_319340.1 75676919 3676329 2970244..2971251 1 NC_007406.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase 2971251 3676329 Nwi_2735 Nitrobacter winogradskyi Nb-255 glyceraldehyde-3-phosphate dehydrogenase YP_319340.1 2970244 D 323098 CDS YP_319341.1 75676920 3676330 2971394..2972590 1 NC_007406.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 2972590 pgk 3676330 pgk Nitrobacter winogradskyi Nb-255 phosphoglycerate kinase YP_319341.1 2971394 D 323098 CDS YP_319342.1 75676921 3676331 2972714..2973745 1 NC_007406.1 fructose-bisphosphate aldolase, class-I 2973745 3676331 Nwi_2737 Nitrobacter winogradskyi Nb-255 fructose-bisphosphate aldolase, class-I YP_319342.1 2972714 D 323098 CDS YP_319343.1 75676922 3676332 2973912..2974613 1 NC_007406.1 thiamine monophosphate synthase 2974613 3676332 Nwi_2738 Nitrobacter winogradskyi Nb-255 thiamine monophosphate synthase YP_319343.1 2973912 D 323098 CDS YP_319344.1 75676923 3676333 2974610..2975650 1 NC_007406.1 Sel1 repeat-containing protein 2975650 3676333 Nwi_2739 Nitrobacter winogradskyi Nb-255 Sel1 repeat-containing protein YP_319344.1 2974610 D 323098 CDS YP_319345.1 75676924 3676334 2975712..2976503 1 NC_007406.1 inositol monophosphatase 2976503 3676334 Nwi_2740 Nitrobacter winogradskyi Nb-255 inositol monophosphatase YP_319345.1 2975712 D 323098 CDS YP_319346.1 75676925 3676335 complement(2976673..2979834) 1 NC_007406.1 hydrophobe/amphiphile efflux protein 2979834 3676335 Nwi_2741 Nitrobacter winogradskyi Nb-255 hydrophobe/amphiphile efflux protein YP_319346.1 2976673 R 323098 CDS YP_319347.1 75676926 3676336 complement(2979841..2981046) 1 NC_007406.1 secretion protein HlyD 2981046 3676336 Nwi_2742 Nitrobacter winogradskyi Nb-255 secretion protein HlyD YP_319347.1 2979841 R 323098 CDS YP_319348.1 75676927 3676337 2981511..2982587 1 NC_007406.1 hypothetical protein 2982587 3676337 Nwi_2743 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319348.1 2981511 D 323098 CDS YP_319349.1 75676928 3676338 2982598..2983626 1 NC_007406.1 hypothetical protein 2983626 3676338 Nwi_2744 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319349.1 2982598 D 323098 CDS YP_319350.1 75676929 3676339 2983846..2984295 1 NC_007406.1 N-acetyltransferase 2984295 3676339 Nwi_2745 Nitrobacter winogradskyi Nb-255 N-acetyltransferase YP_319350.1 2983846 D 323098 CDS YP_319351.1 75676930 3676340 complement(2984357..2986240) 1 NC_007406.1 ABC transporter ATP-binding/permease 2986240 3676340 Nwi_2746 Nitrobacter winogradskyi Nb-255 ABC transporter ATP-binding/permease YP_319351.1 2984357 R 323098 CDS YP_319352.1 75676931 3676341 2986389..2986616 1 NC_007406.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 2986616 rpmE 3676341 rpmE Nitrobacter winogradskyi Nb-255 50S ribosomal protein L31 YP_319352.1 2986389 D 323098 CDS YP_319353.1 75676932 3676342 complement(2986724..2987272) 1 NC_007406.1 hypothetical protein 2987272 3676342 Nwi_2748 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319353.1 2986724 R 323098 CDS YP_319354.1 75676933 3676343 complement(2987862..2988050) 1 NC_007406.1 hypothetical protein 2988050 3676343 Nwi_2749 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319354.1 2987862 R 323098 CDS YP_319355.1 75676934 3676344 2988257..2989255 1 NC_007406.1 zinc-containing alcohol dehydrogenase superfamily protein 2989255 3676344 Nwi_2750 Nitrobacter winogradskyi Nb-255 zinc-containing alcohol dehydrogenase superfamily protein YP_319355.1 2988257 D 323098 CDS YP_319356.1 75676935 3675090 2989347..2992229 1 NC_007406.1 multi-sensor diguanylate cyclase/phophodiesterase 2992229 3675090 Nwi_2751 Nitrobacter winogradskyi Nb-255 multi-sensor diguanylate cyclase/phophodiesterase YP_319356.1 2989347 D 323098 CDS YP_319357.1 75676936 3675091 complement(2992273..2992938) 1 NC_007406.1 hypothetical protein 2992938 3675091 Nwi_2752 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319357.1 2992273 R 323098 CDS YP_319358.1 75676937 3675092 2993099..2993941 1 NC_007406.1 hypothetical protein 2993941 3675092 Nwi_2753 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319358.1 2993099 D 323098 CDS YP_319359.1 75676938 3675093 2994159..2995541 1 NC_007406.1 polysaccharide biosynthesis protein 2995541 3675093 Nwi_2754 Nitrobacter winogradskyi Nb-255 polysaccharide biosynthesis protein YP_319359.1 2994159 D 323098 CDS YP_319360.1 75676939 3675094 complement(2995670..2996458) 1 NC_007406.1 3-hydroxybutyrate dehydrogenase 2996458 3675094 Nwi_2755 Nitrobacter winogradskyi Nb-255 3-hydroxybutyrate dehydrogenase YP_319360.1 2995670 R 323098 CDS YP_319361.1 75676940 3675095 complement(2996594..2997103) 1 NC_007406.1 hypothetical protein 2997103 3675095 Nwi_2756 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319361.1 2996594 R 323098 CDS YP_319362.1 75676941 3675096 complement(2997390..2998439) 1 NC_007406.1 sulfate transporter permease 2998439 3675096 Nwi_2757 Nitrobacter winogradskyi Nb-255 sulfate transporter permease YP_319362.1 2997390 R 323098 CDS YP_319363.1 75676942 3675097 complement(2998429..2999298) 1 NC_007406.1 sulfate ABC transporter permease 2999298 3675097 Nwi_2758 Nitrobacter winogradskyi Nb-255 sulfate ABC transporter permease YP_319363.1 2998429 R 323098 CDS YP_319364.1 75676943 3675098 complement(2999310..3000146) 1 NC_007406.1 sulfate ABC transporter permease 3000146 3675098 Nwi_2759 Nitrobacter winogradskyi Nb-255 sulfate ABC transporter permease YP_319364.1 2999310 R 323098 CDS YP_319365.1 75676944 3675099 complement(3000177..3001166) 1 NC_007406.1 thiosulfate-binding protein 3001166 3675099 Nwi_2760 Nitrobacter winogradskyi Nb-255 thiosulfate-binding protein YP_319365.1 3000177 R 323098 CDS YP_319366.1 75676945 3675100 complement(3001296..3002060) 1 NC_007406.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 3002060 3675100 Nwi_2761 Nitrobacter winogradskyi Nb-255 phosphoadenosine phosphosulfate reductase YP_319366.1 3001296 R 323098 CDS YP_319367.1 75676946 3675101 complement(3002057..3003487) 1 NC_007406.1 uroporphyrin-III C-methyltransferase 3003487 3675101 Nwi_2762 Nitrobacter winogradskyi Nb-255 uroporphyrin-III C-methyltransferase YP_319367.1 3002057 R 323098 CDS YP_319368.1 75676947 3675102 3003752..3004558 1 NC_007406.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 3004558 3675102 Nwi_2763 Nitrobacter winogradskyi Nb-255 sulfate adenylyltransferase subunit 2 YP_319368.1 3003752 D 323098 CDS YP_319369.1 75676948 3675103 3004593..3006518 1 NC_007406.1 adenylylsulfate kinase 3006518 3675103 Nwi_2764 Nitrobacter winogradskyi Nb-255 adenylylsulfate kinase YP_319369.1 3004593 D 323098 CDS YP_319370.1 75676949 3675104 3006796..3009021 1 NC_007406.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA; malate synthase G 3009021 3675104 Nwi_2765 Nitrobacter winogradskyi Nb-255 malate synthase G YP_319370.1 3006796 D 323098 CDS YP_319371.1 75676950 3675105 complement(3009136..3009291) 1 NC_007406.1 hypothetical protein 3009291 3675105 Nwi_2766 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319371.1 3009136 R 323098 CDS YP_319372.1 75676951 3675106 3009640..3010008 1 NC_007406.1 hypothetical protein 3010008 3675106 Nwi_2767 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319372.1 3009640 D 323098 CDS YP_319373.1 75676952 3675107 3010259..3010681 1 NC_007406.1 hypothetical protein 3010681 3675107 Nwi_2768 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319373.1 3010259 D 323098 CDS YP_319374.1 75676953 3675108 complement(3010700..3011083) 1 NC_007406.1 hypothetical protein 3011083 3675108 Nwi_2769 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319374.1 3010700 R 323098 CDS YP_319375.1 75676954 3675747 complement(3011103..3011348) 1 NC_007406.1 hypothetical protein 3011348 3675747 Nwi_2770 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319375.1 3011103 R 323098 CDS YP_319376.1 75676955 3675748 complement(3011323..3012129) 1 NC_007406.1 in Caulobacter crescentus, CC3477 is differentially expressed in minimal salts media with glucose as compared to complex media; two-component response regulator 3012129 3675748 Nwi_2771 Nitrobacter winogradskyi Nb-255 two-component response regulator YP_319376.1 3011323 R 323098 CDS YP_319377.1 75676956 3675749 3012368..3012586 1 NC_007406.1 hypothetical protein 3012586 3675749 Nwi_2772 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319377.1 3012368 D 323098 CDS YP_319378.1 75676957 3675750 3012586..3013128 1 NC_007406.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 3013128 3675750 Nwi_2773 Nitrobacter winogradskyi Nb-255 RNA polymerase sigma factor YP_319378.1 3012586 D 323098 CDS YP_319379.1 75676958 3675751 complement(3013306..3014964) 1 NC_007406.1 HWE histidine kinase 3014964 3675751 Nwi_2774 Nitrobacter winogradskyi Nb-255 HWE histidine kinase YP_319379.1 3013306 R 323098 CDS YP_319380.1 75676959 3675752 complement(3015393..3016661) 1 NC_007406.1 2-methylthioadenine synthetase 3016661 3675752 Nwi_2775 Nitrobacter winogradskyi Nb-255 2-methylthioadenine synthetase YP_319380.1 3015393 R 323098 CDS YP_319381.1 75676960 3675753 complement(3016661..3017554) 1 NC_007406.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 3017554 dapF 3675753 dapF Nitrobacter winogradskyi Nb-255 diaminopimelate epimerase YP_319381.1 3016661 R 323098 CDS YP_319382.1 75676961 3675754 3017811..3018539 1 NC_007406.1 transcription activator, effector binding 3018539 3675754 Nwi_2777 Nitrobacter winogradskyi Nb-255 transcription activator, effector binding YP_319382.1 3017811 D 323098 CDS YP_319383.1 75676962 3675755 3018536..3019258 1 NC_007406.1 hypothetical protein 3019258 3675755 Nwi_2778 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319383.1 3018536 D 323098 CDS YP_319384.1 75676963 3675756 3019454..3021004 1 NC_007406.1 Signal recognition particle protein 3021004 3675756 Nwi_2779 Nitrobacter winogradskyi Nb-255 Signal recognition particle protein YP_319384.1 3019454 D 323098 CDS YP_319385.1 75676964 3675757 3021083..3021415 1 NC_007406.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 3021415 rpsP 3675757 rpsP Nitrobacter winogradskyi Nb-255 30S ribosomal protein S16 YP_319385.1 3021083 D 323098 CDS YP_319386.1 75676965 3675758 3021428..3021949 1 NC_007406.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 3021949 rimM 3675758 rimM Nitrobacter winogradskyi Nb-255 16S rRNA-processing protein RimM YP_319386.1 3021428 D 323098 CDS YP_319387.1 75676966 3675759 3022113..3022832 1 NC_007406.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 3022832 trmD 3675759 trmD Nitrobacter winogradskyi Nb-255 tRNA (guanine-N(1)-)-methyltransferase YP_319387.1 3022113 D 323098 CDS YP_319388.1 75676967 3675760 3023053..3023433 1 NC_007406.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 3023433 rplS 3675760 rplS Nitrobacter winogradskyi Nb-255 50S ribosomal protein L19 YP_319388.1 3023053 D 323098 CDS YP_319389.1 75676968 3675761 3023540..3023794 1 NC_007406.1 hypothetical protein 3023794 3675761 Nwi_2784 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319389.1 3023540 D 323098 CDS YP_319390.1 75676969 3675762 3023869..3025275 1 NC_007406.1 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 3025275 3675762 Nwi_2785 Nitrobacter winogradskyi Nb-255 isopropylmalate isomerase large subunit YP_319390.1 3023869 D 323098 CDS YP_319391.1 75676970 3675763 3025506..3026111 1 NC_007406.1 hypothetical protein 3026111 3675763 Nwi_2786 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319391.1 3025506 D 323098 CDS YP_319392.1 75676971 3675764 complement(3026228..3026533) 1 NC_007406.1 hypothetical protein 3026533 3675764 Nwi_2787 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319392.1 3026228 R 323098 CDS YP_319393.1 75676972 3675765 complement(3026779..3027063) 1 NC_007406.1 hypothetical protein 3027063 3675765 Nwi_2788 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319393.1 3026779 R 323098 CDS YP_319394.1 75676973 3675766 complement(3027261..3027599) 1 NC_007406.1 hypothetical protein 3027599 3675766 Nwi_2789 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319394.1 3027261 R 323098 CDS YP_319395.1 75676974 3677267 3027726..3028127 1 NC_007406.1 hypothetical protein 3028127 3677267 Nwi_2790 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319395.1 3027726 D 323098 CDS YP_319396.1 75676975 3677268 3028211..3028816 1 NC_007406.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 3028816 leuD 3677268 leuD Nitrobacter winogradskyi Nb-255 isopropylmalate isomerase small subunit YP_319396.1 3028211 D 323098 CDS YP_319397.1 75676976 3677269 3028966..3029616 1 NC_007406.1 carbonic anhydrase 3029616 3677269 Nwi_2792 Nitrobacter winogradskyi Nb-255 carbonic anhydrase YP_319397.1 3028966 D 323098 CDS YP_319398.1 75676977 3677270 complement(3029712..3030746) 1 NC_007406.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 3030746 3677270 Nwi_2793 Nitrobacter winogradskyi Nb-255 aspartate-semialdehyde dehydrogenase YP_319398.1 3029712 R 323098 CDS YP_319399.1 75676978 3677271 3031143..3031535 1 NC_007406.1 hypothetical protein 3031535 3677271 Nwi_2794 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319399.1 3031143 D 323098 CDS YP_319400.1 75676979 3677272 complement(3031658..3032770) 1 NC_007406.1 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 3032770 3677272 Nwi_2795 Nitrobacter winogradskyi Nb-255 3-isopropylmalate dehydrogenase YP_319400.1 3031658 R 323098 CDS YP_319401.1 75676980 3677273 complement(3033072..3033581) 1 NC_007406.1 copper/Zinc superoxide dismutase 3033581 3677273 Nwi_2796 Nitrobacter winogradskyi Nb-255 copper/Zinc superoxide dismutase YP_319401.1 3033072 R 323098 CDS YP_319402.1 75676981 3677274 3033915..3035471 1 NC_007406.1 catalyzes the formation of malonyl-CoA from malonate and CoA; malonyl-CoA synthase 3035471 3677274 Nwi_2797 Nitrobacter winogradskyi Nb-255 malonyl-CoA synthase YP_319402.1 3033915 D 323098 CDS YP_319403.1 75676982 3677275 3035592..3036017 1 NC_007406.1 succinate dehydrogenase, cytochrome b subunit 3036017 3677275 Nwi_2798 Nitrobacter winogradskyi Nb-255 succinate dehydrogenase, cytochrome b subunit YP_319403.1 3035592 D 323098 CDS YP_319404.1 75676983 3677276 3036014..3036421 1 NC_007406.1 succinate dehydrogenase, cytochrome b subunit 3036421 3677276 Nwi_2799 Nitrobacter winogradskyi Nb-255 succinate dehydrogenase, cytochrome b subunit YP_319404.1 3036014 D 323098 CDS YP_319405.1 75676984 3677277 3036425..3038248 1 NC_007406.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 3038248 sdhA 3677277 sdhA Nitrobacter winogradskyi Nb-255 succinate dehydrogenase flavoprotein subunit YP_319405.1 3036425 D 323098 CDS YP_319406.1 75676985 3677278 3038472..3039254 1 NC_007406.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 3039254 sdhB 3677278 sdhB Nitrobacter winogradskyi Nb-255 succinate dehydrogenase iron-sulfur subunit YP_319406.1 3038472 D 323098 CDS YP_319407.1 75676986 3677279 3039920..3041911 1 NC_007406.1 OmpA/MotB protein 3041911 3677279 Nwi_2802 Nitrobacter winogradskyi Nb-255 OmpA/MotB protein YP_319407.1 3039920 D 323098 CDS YP_319408.1 75676987 3677280 complement(3042012..3043241) 1 NC_007406.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 3043241 3677280 Nwi_2803 Nitrobacter winogradskyi Nb-255 argininosuccinate synthase YP_319408.1 3042012 R 323098 CDS YP_319409.1 75676988 3677281 complement(3043312..3044100) 1 NC_007406.1 phosphoesterase, PA-phosphatase related 3044100 3677281 Nwi_2804 Nitrobacter winogradskyi Nb-255 phosphoesterase, PA-phosphatase related YP_319409.1 3043312 R 323098 CDS YP_319410.1 75676989 3677282 complement(3044272..3044748) 1 NC_007406.1 hypothetical protein 3044748 3677282 Nwi_2805 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319410.1 3044272 R 323098 CDS YP_319411.1 75676990 3677283 complement(3044785..3046068) 1 NC_007406.1 hypothetical protein 3046068 3677283 Nwi_2806 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319411.1 3044785 R 323098 CDS YP_319412.1 75676991 3677284 complement(3046248..3046796) 1 NC_007406.1 hypothetical protein 3046796 3677284 Nwi_2807 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319412.1 3046248 R 323098 CDS YP_319413.1 75676992 3677285 complement(3047161..3047541) 1 NC_007406.1 hypothetical protein 3047541 3677285 Nwi_2808 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319413.1 3047161 R 323098 CDS YP_319414.1 75676993 3675982 complement(3047651..3047956) 1 NC_007406.1 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; catalyzes the formation of (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7, 8-dihydro-6H-pterin from (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7, 8-tetrahydro-4a-hydroxypterin; functions in recycling tetrahydrobiopterin (BH4) in phenylalanine hydroxylase reaction; pterin-4-alpha-carbinolamine dehydratase 3047956 phhB 3675982 phhB Nitrobacter winogradskyi Nb-255 pterin-4-alpha-carbinolamine dehydratase YP_319414.1 3047651 R 323098 CDS YP_319415.1 75676994 3675983 3048298..3048636 1 NC_007406.1 4Fe-4S ferredoxin 3048636 3675983 Nwi_2810 Nitrobacter winogradskyi Nb-255 4Fe-4S ferredoxin YP_319415.1 3048298 D 323098 CDS YP_319416.1 75676995 3675984 3048702..3049193 1 NC_007406.1 hypothetical protein 3049193 3675984 Nwi_2811 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319416.1 3048702 D 323098 CDS YP_319417.1 75676996 3675985 complement(3049285..3051198) 1 NC_007406.1 molecular chaperone; heat shock protein 90 3051198 3675985 Nwi_2812 Nitrobacter winogradskyi Nb-255 heat shock protein 90 YP_319417.1 3049285 R 323098 CDS YP_319418.1 75676997 3675986 3051635..3052300 1 NC_007406.1 PepSY-associated TM helix family protein 3052300 3675986 Nwi_2813 Nitrobacter winogradskyi Nb-255 PepSY-associated TM helix family protein YP_319418.1 3051635 D 323098 CDS YP_319419.1 75676998 3675987 3052311..3052823 1 NC_007406.1 hypothetical protein 3052823 3675987 Nwi_2814 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319419.1 3052311 D 323098 CDS YP_319420.1 75676999 3675988 3052984..3053796 1 NC_007406.1 hypothetical protein 3053796 3675988 Nwi_2815 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319420.1 3052984 D 323098 CDS YP_319421.1 75677000 3675989 3053801..3054817 1 NC_007406.1 ApbE-like lipoprotein 3054817 3675989 Nwi_2816 Nitrobacter winogradskyi Nb-255 ApbE-like lipoprotein YP_319421.1 3053801 D 323098 CDS YP_319422.1 75677001 3675990 complement(3054930..3055952) 1 NC_007406.1 tRNA-dihydrouridine synthase A 3055952 3675990 Nwi_2817 Nitrobacter winogradskyi Nb-255 tRNA-dihydrouridine synthase A YP_319422.1 3054930 R 323098 CDS YP_319423.1 75677002 3675991 complement(3056107..3057057) 1 NC_007406.1 integrase, catalytic region 3057057 3675991 Nwi_2818 Nitrobacter winogradskyi Nb-255 integrase, catalytic region YP_319423.1 3056107 R 323098 CDS YP_319424.1 75677003 3675992 complement(3057115..3058095) 1 NC_007406.1 Fis family transcriptional regulator 3058095 3675992 Nwi_2819 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_319424.1 3057115 R 323098 CDS YP_319425.1 75677004 3675993 complement(3058092..3058466) 1 NC_007406.1 transposase IS3/IS911 3058466 3675993 Nwi_2820 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_319425.1 3058092 R 323098 CDS YP_319426.1 75677005 3674636 3058571..3058834 1 NC_007406.1 ISBm1, transposase orfA 3058834 3674636 Nwi_2821 Nitrobacter winogradskyi Nb-255 ISBm1, transposase orfA YP_319426.1 3058571 D 323098 CDS YP_319427.1 75677006 3674637 3058876..3059259 1 NC_007406.1 transposase, IS4 3059259 3674637 Nwi_2822 Nitrobacter winogradskyi Nb-255 transposase, IS4 YP_319427.1 3058876 D 323098 CDS YP_319428.1 75677007 3674638 3059315..3059713 1 NC_007406.1 transposase 3059713 3674638 Nwi_2823 Nitrobacter winogradskyi Nb-255 transposase YP_319428.1 3059315 D 323098 CDS YP_319429.1 75677008 3674639 3059728..3060096 1 NC_007406.1 transposase, IS4 3060096 3674639 Nwi_2824 Nitrobacter winogradskyi Nb-255 transposase, IS4 YP_319429.1 3059728 D 323098 CDS YP_319430.1 75677009 3674640 complement(3060211..3060483) 1 NC_007406.1 hypothetical protein 3060483 3674640 Nwi_2825 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319430.1 3060211 R 323098 CDS YP_319431.1 75677010 3674641 complement(3060486..3061571) 1 NC_007406.1 hypothetical protein 3061571 3674641 Nwi_2826 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319431.1 3060486 R 323098 CDS YP_319432.1 75677011 3674642 complement(3061624..3062334) 1 NC_007406.1 hypothetical protein 3062334 3674642 Nwi_2827 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319432.1 3061624 R 323098 CDS YP_319433.1 75677012 3674643 complement(3062340..3063005) 1 NC_007406.1 hypothetical protein 3063005 3674643 Nwi_2828 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319433.1 3062340 R 323098 CDS YP_319434.1 75677013 3675044 complement(3063138..3063770) 1 NC_007406.1 hypothetical protein 3063770 3675044 Nwi_2829 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319434.1 3063138 R 323098 CDS YP_319435.1 75677014 3675045 complement(3063767..3064078) 1 NC_007406.1 hypothetical protein 3064078 3675045 Nwi_2830 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319435.1 3063767 R 323098 CDS YP_319436.1 75677015 3675046 complement(3064078..3064413) 1 NC_007406.1 hypothetical protein 3064413 3675046 Nwi_2831 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319436.1 3064078 R 323098 CDS YP_319437.1 75677016 3675048 3064879..3065343 1 NC_007406.1 prophage LambdaMc01, site-specific recombinase resolvase 3065343 3675048 Nwi_2833 Nitrobacter winogradskyi Nb-255 prophage LambdaMc01, site-specific recombinase resolvase YP_319437.1 3064879 D 323098 CDS YP_319438.1 75677017 3675049 3065475..3065858 1 NC_007406.1 hypothetical protein 3065858 3675049 Nwi_2834 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319438.1 3065475 D 323098 CDS YP_319439.1 75677018 3675204 complement(3065862..3066695) 1 NC_007406.1 hypothetical protein 3066695 3675204 Nwi_2835 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319439.1 3065862 R 323098 CDS YP_319440.1 75677019 3675205 complement(3066705..3067226) 1 NC_007406.1 hypothetical protein 3067226 3675205 Nwi_2836 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319440.1 3066705 R 323098 CDS YP_319441.1 75677020 3675206 complement(3067306..3067887) 1 NC_007406.1 hypothetical protein 3067887 3675206 Nwi_2837 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319441.1 3067306 R 323098 CDS YP_319442.1 75677021 3675207 complement(3067887..3068654) 1 NC_007406.1 Phage Gp37Gp68 3068654 3675207 Nwi_2838 Nitrobacter winogradskyi Nb-255 Phage Gp37Gp68 YP_319442.1 3067887 R 323098 CDS YP_319443.1 75677022 3675209 complement(3069234..3069695) 1 NC_007406.1 integrase, catalytic region 3069695 3675209 Nwi_2839 Nitrobacter winogradskyi Nb-255 integrase, catalytic region YP_319443.1 3069234 R 323098 CDS YP_319444.1 75677023 3675210 3069897..3070175 1 NC_007406.1 hypothetical protein 3070175 3675210 Nwi_2840 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319444.1 3069897 D 323098 CDS YP_319445.1 75677024 3675211 3070201..3071211 1 NC_007406.1 resolvase 3071211 3675211 Nwi_2841 Nitrobacter winogradskyi Nb-255 resolvase YP_319445.1 3070201 D 323098 CDS YP_319446.1 75677025 3675212 3071202..3071708 1 NC_007406.1 IstB-like ATP-binding protein 3071708 3675212 Nwi_2842 Nitrobacter winogradskyi Nb-255 IstB-like ATP-binding protein YP_319446.1 3071202 D 323098 CDS YP_319447.1 75677026 3675215 complement(3074650..3076608) 1 NC_007406.1 outer membrane autotransporter barrel 3076608 3675215 Nwi_2845 Nitrobacter winogradskyi Nb-255 outer membrane autotransporter barrel YP_319447.1 3074650 R 323098 CDS YP_319448.1 75677027 3675593 3077297..3079423 1 NC_007406.1 peptidase C14, caspase catalytic subunit p20 3079423 3675593 Nwi_2846 Nitrobacter winogradskyi Nb-255 peptidase C14, caspase catalytic subunit p20 YP_319448.1 3077297 D 323098 CDS YP_319449.1 75677028 3675594 complement(3079878..3080519) 1 NC_007406.1 ISRm2011-2 transposase 3080519 3675594 Nwi_2847 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_319449.1 3079878 R 323098 CDS YP_319450.1 75677029 3675595 complement(3080471..3080821) 1 NC_007406.1 transposase 3080821 3675595 Nwi_2848 Nitrobacter winogradskyi Nb-255 transposase YP_319450.1 3080471 R 323098 CDS YP_319451.1 75677030 3675596 complement(3081298..3081678) 1 NC_007406.1 hypothetical protein 3081678 3675596 Nwi_2849 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319451.1 3081298 R 323098 CDS YP_319452.1 75677031 3675597 complement(3081743..3082732) 1 NC_007406.1 integrase, catalytic region 3082732 3675597 Nwi_2850 Nitrobacter winogradskyi Nb-255 integrase, catalytic region YP_319452.1 3081743 R 323098 CDS YP_319453.1 75677032 3675598 3083032..3084996 1 NC_007406.1 hypothetical protein 3084996 3675598 Nwi_2851 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319453.1 3083032 D 323098 CDS YP_319454.1 75677033 3675599 complement(3085190..3086434) 1 NC_007406.1 glycosyl transferase 3086434 3675599 Nwi_2852 Nitrobacter winogradskyi Nb-255 glycosyl transferase YP_319454.1 3085190 R 323098 CDS YP_319455.1 75677034 3675600 complement(3086450..3087817) 1 NC_007406.1 Na+/H+ antiporter NhaA 3087817 3675600 Nwi_2853 Nitrobacter winogradskyi Nb-255 Na+/H+ antiporter NhaA YP_319455.1 3086450 R 323098 CDS YP_319456.1 75677035 3675601 3087931..3088629 1 NC_007406.1 hypothetical protein 3088629 3675601 Nwi_2854 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319456.1 3087931 D 323098 CDS YP_319457.1 75677036 3675602 3088669..3088977 1 NC_007406.1 hypothetical protein 3088977 3675602 Nwi_2855 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319457.1 3088669 D 323098 CDS YP_319458.1 75677037 3675603 3088981..3089493 1 NC_007406.1 N-acetyltransferase 3089493 3675603 Nwi_2856 Nitrobacter winogradskyi Nb-255 N-acetyltransferase YP_319458.1 3088981 D 323098 CDS YP_319459.1 75677038 3675604 3089533..3089808 1 NC_007406.1 hypothetical protein 3089808 3675604 Nwi_2857 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319459.1 3089533 D 323098 CDS YP_319460.1 75677039 3675605 3090054..3090386 1 NC_007406.1 hypothetical protein 3090386 3675605 Nwi_2858 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319460.1 3090054 D 323098 CDS YP_319461.1 75677040 3675606 3090452..3092632 1 NC_007406.1 ParB-like nuclease 3092632 3675606 Nwi_2859 Nitrobacter winogradskyi Nb-255 ParB-like nuclease YP_319461.1 3090452 D 323098 CDS YP_319462.1 75677041 3675607 3092687..3093916 1 NC_007406.1 tRNA/helicase-type nucleic acid binding protein 3093916 3675607 Nwi_2860 Nitrobacter winogradskyi Nb-255 tRNA/helicase-type nucleic acid binding protein YP_319462.1 3092687 D 323098 CDS YP_319463.1 75677042 3675608 complement(3094057..3094425) 1 NC_007406.1 transposase, IS4 3094425 3675608 Nwi_2861 Nitrobacter winogradskyi Nb-255 transposase, IS4 YP_319463.1 3094057 R 323098 CDS YP_319464.1 75677043 3675609 complement(3094440..3094838) 1 NC_007406.1 transposase 3094838 3675609 Nwi_2862 Nitrobacter winogradskyi Nb-255 transposase YP_319464.1 3094440 R 323098 CDS YP_319465.1 75677044 3675610 3095047..3097812 1 NC_007406.1 hypothetical protein 3097812 3675610 Nwi_2863 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319465.1 3095047 D 323098 CDS YP_319466.1 75677045 3675611 3097875..3098249 1 NC_007406.1 transposase IS3/IS911 3098249 3675611 Nwi_2864 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_319466.1 3097875 D 323098 CDS YP_319467.1 75677046 3674838 3098246..3099226 1 NC_007406.1 Fis family transcriptional regulator 3099226 3674838 Nwi_2865 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_319467.1 3098246 D 323098 CDS YP_319468.1 75677047 3674839 complement(3099378..3100358) 1 NC_007406.1 Fis family transcriptional regulator 3100358 3674839 Nwi_2866 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_319468.1 3099378 R 323098 CDS YP_319469.1 75677048 3674840 complement(3100355..3100729) 1 NC_007406.1 transposase IS3/IS911 3100729 3674840 Nwi_2867 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_319469.1 3100355 R 323098 CDS YP_319470.1 75677049 3674841 complement(3101193..3102485) 1 NC_007406.1 hypothetical protein 3102485 3674841 Nwi_2868 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319470.1 3101193 R 323098 CDS YP_319471.1 75677050 3674842 complement(3102475..3102816) 1 NC_007406.1 hypothetical protein 3102816 3674842 Nwi_2869 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319471.1 3102475 R 323098 CDS YP_319472.1 75677051 3674843 3103163..3103435 1 NC_007406.1 hypothetical protein 3103435 3674843 Nwi_2870 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319472.1 3103163 D 323098 CDS YP_319473.1 75677052 3674844 3103444..3104322 1 NC_007406.1 hypothetical protein 3104322 3674844 Nwi_2871 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319473.1 3103444 D 323098 CDS YP_319474.1 75677053 3675495 3104297..3104968 1 NC_007406.1 hypothetical protein 3104968 3675495 Nwi_2872 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319474.1 3104297 D 323098 CDS YP_319475.1 75677054 3676703 3104952..3105659 1 NC_007406.1 hypothetical protein 3105659 3676703 Nwi_2873 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319475.1 3104952 D 323098 CDS YP_319476.1 75677055 3676704 3105391..3106449 1 NC_007406.1 hypothetical protein 3106449 3676704 Nwi_2874 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319476.1 3105391 D 323098 CDS YP_319477.1 75677056 3676705 3106724..3107272 1 NC_007406.1 hypothetical protein 3107272 3676705 Nwi_2875 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319477.1 3106724 D 323098 CDS YP_319478.1 75677057 3676706 complement(3107347..3108009) 1 NC_007406.1 hypothetical protein 3108009 3676706 Nwi_2876 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319478.1 3107347 R 323098 CDS YP_319479.1 75677058 3676707 complement(3108006..3108965) 1 NC_007406.1 hypothetical protein 3108965 3676707 Nwi_2877 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319479.1 3108006 R 323098 CDS YP_319480.1 75677059 3676708 3109234..3109506 1 NC_007406.1 hypothetical protein 3109506 3676708 Nwi_2878 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319480.1 3109234 D 323098 CDS YP_319481.1 75677060 3676709 complement(3109684..3110664) 1 NC_007406.1 Fis family transcriptional regulator 3110664 3676709 Nwi_2879 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_319481.1 3109684 R 323098 CDS YP_319482.1 75677061 3676710 complement(3110661..3111035) 1 NC_007406.1 transposase IS3/IS911 3111035 3676710 Nwi_2880 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_319482.1 3110661 R 323098 CDS YP_319483.1 75677062 3676711 complement(3111299..3113764) 1 NC_007406.1 TonB-dependent siderophore receptor 3113764 3676711 Nwi_2881 Nitrobacter winogradskyi Nb-255 TonB-dependent siderophore receptor YP_319483.1 3111299 R 323098 CDS YP_319484.1 75677063 3676712 complement(3113977..3114981) 1 NC_007406.1 FecR protein 3114981 3676712 Nwi_2882 Nitrobacter winogradskyi Nb-255 FecR protein YP_319484.1 3113977 R 323098 CDS YP_319485.1 75677064 3676713 complement(3115272..3115790) 1 NC_007406.1 fec I like protein 3115790 3676713 Nwi_2883 Nitrobacter winogradskyi Nb-255 fec I like protein YP_319485.1 3115272 R 323098 CDS YP_319486.1 75677065 3676714 complement(3116136..3116744) 1 NC_007406.1 hypothetical protein 3116744 3676714 Nwi_2884 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319486.1 3116136 R 323098 CDS YP_319487.1 75677066 3676841 complement(3116844..3117314) 1 NC_007406.1 MarR family transcriptional regulator 3117314 3676841 Nwi_2885 Nitrobacter winogradskyi Nb-255 MarR family transcriptional regulator YP_319487.1 3116844 R 323098 CDS YP_319488.1 75677067 3676842 3117599..3118045 1 NC_007406.1 glyoxalase/bleomycin resistance protein/dioxygenase 3118045 3676842 Nwi_2886 Nitrobacter winogradskyi Nb-255 glyoxalase/bleomycin resistance protein/dioxygenase YP_319488.1 3117599 D 323098 CDS YP_319489.1 75677068 3676843 complement(3118159..3119334) 1 NC_007406.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit beta 3119334 3676843 Nwi_2887 Nitrobacter winogradskyi Nb-255 ribonucleotide-diphosphate reductase subunit beta YP_319489.1 3118159 R 323098 CDS YP_319490.1 75677069 3676844 complement(3119427..3122336) 1 NC_007406.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 3122336 3676844 Nwi_2888 Nitrobacter winogradskyi Nb-255 ribonucleotide-diphosphate reductase subunit alpha YP_319490.1 3119427 R 323098 CDS YP_319491.1 75677070 3676845 3122721..3123539 1 NC_007406.1 hypothetical protein 3123539 3676845 Nwi_2889 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319491.1 3122721 D 323098 CDS YP_319492.1 75677071 3676846 3123918..3126233 1 NC_007406.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 3126233 3676846 Nwi_2890 Nitrobacter winogradskyi Nb-255 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase YP_319492.1 3123918 D 323098 CDS YP_319493.1 75677072 3676847 3126624..3127214 1 NC_007406.1 ErfK/YbiS/YcfS/YnhG 3127214 3676847 Nwi_2891 Nitrobacter winogradskyi Nb-255 ErfK/YbiS/YcfS/YnhG YP_319493.1 3126624 D 323098 CDS YP_319494.1 75677073 3676848 3127270..3128307 1 NC_007406.1 extracellular solute-binding protein 3128307 3676848 Nwi_2892 Nitrobacter winogradskyi Nb-255 extracellular solute-binding protein YP_319494.1 3127270 D 323098 CDS YP_319495.1 75677074 3675296 complement(3128362..3129033) 1 NC_007406.1 hypothetical protein 3129033 3675296 Nwi_2893 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319495.1 3128362 R 323098 CDS YP_319496.1 75677075 3675297 3129380..3129850 1 NC_007406.1 hypothetical protein 3129850 3675297 Nwi_2894 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319496.1 3129380 D 323098 CDS YP_319497.1 75677076 3675298 3130143..3131183 1 NC_007406.1 beta-lactamase-like protein 3131183 3675298 Nwi_2895 Nitrobacter winogradskyi Nb-255 beta-lactamase-like protein YP_319497.1 3130143 D 323098 CDS YP_319498.1 75677077 3675299 complement(3131312..3132493) 1 NC_007406.1 diguanylate cyclase 3132493 3675299 Nwi_2896 Nitrobacter winogradskyi Nb-255 diguanylate cyclase YP_319498.1 3131312 R 323098 CDS YP_319499.1 75677078 3675300 complement(3133137..3133559) 1 NC_007406.1 hypothetical protein 3133559 3675300 Nwi_2897 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319499.1 3133137 R 323098 CDS YP_319500.1 75677079 3675301 complement(3133769..3134167) 1 NC_007406.1 hypothetical protein 3134167 3675301 Nwi_2898 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319500.1 3133769 R 323098 CDS YP_319501.1 75677080 3675302 3134284..3135267 1 NC_007406.1 integrase, catalytic region 3135267 3675302 Nwi_2899 Nitrobacter winogradskyi Nb-255 integrase, catalytic region YP_319501.1 3134284 D 323098 CDS YP_319502.1 75677081 3675303 3135254..3135694 1 NC_007406.1 hypothetical protein 3135694 3675303 Nwi_2900 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319502.1 3135254 D 323098 CDS YP_319503.1 75677082 3675304 3136007..3136378 1 NC_007406.1 hypothetical protein 3136378 3675304 Nwi_2901 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319503.1 3136007 D 323098 CDS YP_319504.1 75677083 3675305 3136488..3138863 1 NC_007406.1 TonB-dependent receptor 3138863 3675305 Nwi_2902 Nitrobacter winogradskyi Nb-255 TonB-dependent receptor YP_319504.1 3136488 D 323098 CDS YP_319505.1 75677084 3675306 3138881..3140089 1 NC_007406.1 BNR repeat-containing glycosyl hydrolase 3140089 3675306 Nwi_2903 Nitrobacter winogradskyi Nb-255 BNR repeat-containing glycosyl hydrolase YP_319505.1 3138881 D 323098 CDS YP_319506.1 75677085 3675573 3140086..3140613 1 NC_007406.1 signal peptide protein 3140613 3675573 Nwi_2904 Nitrobacter winogradskyi Nb-255 signal peptide protein YP_319506.1 3140086 D 323098 CDS YP_319507.1 75677086 3675574 complement(3140894..3142039) 1 NC_007406.1 high-affinity nickel-transporter 3142039 3675574 Nwi_2905 Nitrobacter winogradskyi Nb-255 high-affinity nickel-transporter YP_319507.1 3140894 R 323098 CDS YP_319508.1 75677087 3675575 complement(3142064..3142708) 1 NC_007406.1 hypothetical protein 3142708 3675575 Nwi_2906 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319508.1 3142064 R 323098 CDS YP_319509.1 75677088 3675576 3142941..3143309 1 NC_007406.1 ArsR family transcriptional regulator 3143309 3675576 Nwi_2907 Nitrobacter winogradskyi Nb-255 ArsR family transcriptional regulator YP_319509.1 3142941 D 323098 CDS YP_319510.1 75677089 3675577 complement(3143373..3143567) 1 NC_007406.1 hypothetical protein 3143567 3675577 Nwi_2908 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319510.1 3143373 R 323098 CDS YP_319511.1 75677090 3675578 3143796..3144179 1 NC_007406.1 hypothetical protein 3144179 3675578 Nwi_2909 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319511.1 3143796 D 323098 CDS YP_319512.1 75677091 3675579 complement(3144439..3146007) 1 NC_007406.1 RND efflux system, outer membrane lipoprotein, NodT 3146007 3675579 Nwi_2910 Nitrobacter winogradskyi Nb-255 RND efflux system, outer membrane lipoprotein, NodT YP_319512.1 3144439 R 323098 CDS YP_319513.1 75677092 3675580 complement(3146048..3149200) 1 NC_007406.1 heavy metal efflux pump CzcA 3149200 3675580 Nwi_2911 Nitrobacter winogradskyi Nb-255 heavy metal efflux pump CzcA YP_319513.1 3146048 R 323098 CDS YP_319514.1 75677093 3675581 complement(3149219..3150475) 1 NC_007406.1 secretion protein HlyD 3150475 3675581 Nwi_2912 Nitrobacter winogradskyi Nb-255 secretion protein HlyD YP_319514.1 3149219 R 323098 CDS YP_319515.1 75677094 3675582 3150803..3151477 1 NC_007406.1 two component transcriptional regulator 3151477 3675582 Nwi_2913 Nitrobacter winogradskyi Nb-255 two component transcriptional regulator YP_319515.1 3150803 D 323098 CDS YP_319516.1 75677095 3675583 3151767..3153137 1 NC_007406.1 Signal transduction histidine kinase 3153137 3675583 Nwi_2914 Nitrobacter winogradskyi Nb-255 Signal transduction histidine kinase YP_319516.1 3151767 D 323098 CDS YP_319517.1 75677096 3675584 3153455..3153919 1 NC_007406.1 hypothetical protein 3153919 3675584 Nwi_2915 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319517.1 3153455 D 323098 CDS YP_319518.1 75677097 3675585 3154666..3155184 1 NC_007406.1 hypothetical protein 3155184 3675585 Nwi_2916 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319518.1 3154666 D 323098 CDS YP_319519.1 75677098 3675586 3155333..3156298 1 NC_007406.1 integrase, catalytic region 3156298 3675586 Nwi_2917 Nitrobacter winogradskyi Nb-255 integrase, catalytic region YP_319519.1 3155333 D 323098 CDS YP_319520.1 75677099 3675587 3156459..3157409 1 NC_007406.1 integrase, catalytic region 3157409 3675587 Nwi_2918 Nitrobacter winogradskyi Nb-255 integrase, catalytic region YP_319520.1 3156459 D 323098 CDS YP_319521.1 75677100 3675588 complement(3157406..3158038) 1 NC_007406.1 transposase, IS4 3158038 3675588 Nwi_2919 Nitrobacter winogradskyi Nb-255 transposase, IS4 YP_319521.1 3157406 R 323098 CDS YP_319522.1 75677101 3675589 complement(3157810..3158175) 1 NC_007406.1 ISBm1, transposase orfA 3158175 3675589 Nwi_2920 Nitrobacter winogradskyi Nb-255 ISBm1, transposase orfA YP_319522.1 3157810 R 323098 CDS YP_319523.1 75677102 3675590 3158559..3159275 1 NC_007406.1 ISRm2011-2 transposase 3159275 3675590 Nwi_2921 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_319523.1 3158559 D 323098 CDS YP_319524.1 75677103 3675591 3159369..3159734 1 NC_007406.1 ISBm1, transposase orfA 3159734 3675591 Nwi_2922 Nitrobacter winogradskyi Nb-255 ISBm1, transposase orfA YP_319524.1 3159369 D 323098 CDS YP_319525.1 75677104 3675592 complement(3160186..3160554) 1 NC_007406.1 transposase, IS4 3160554 3675592 Nwi_2923 Nitrobacter winogradskyi Nb-255 transposase, IS4 YP_319525.1 3160186 R 323098 CDS YP_319526.1 75677105 3674279 complement(3161039..3161266) 1 NC_007406.1 IS4 family transposase 3161266 3674279 Nwi_2924 Nitrobacter winogradskyi Nb-255 IS4 family transposase YP_319526.1 3161039 R 323098 CDS YP_319527.1 75677106 3674280 complement(3161421..3161795) 1 NC_007406.1 transposase 3161795 3674280 Nwi_2925 Nitrobacter winogradskyi Nb-255 transposase YP_319527.1 3161421 R 323098 CDS YP_319528.1 75677107 3674281 3162244..3162555 1 NC_007406.1 XRE family transcriptional regulator 3162555 3674281 Nwi_2926 Nitrobacter winogradskyi Nb-255 XRE family transcriptional regulator YP_319528.1 3162244 D 323098 CDS YP_319529.1 75677108 3674282 complement(3162872..3163786) 1 NC_007406.1 CbbX like protein 3163786 3674282 Nwi_2927 Nitrobacter winogradskyi Nb-255 CbbX like protein YP_319529.1 3162872 R 323098 CDS YP_319530.1 75677109 3674283 complement(3163947..3164372) 1 NC_007406.1 ribulose bisphosphate carboxylase, small chain 3164372 3674283 Nwi_2928 Nitrobacter winogradskyi Nb-255 ribulose bisphosphate carboxylase, small chain YP_319530.1 3163947 R 323098 CDS YP_319531.1 75677110 3674284 complement(3164384..3165853) 1 NC_007406.1 type III RuBisCO; involved in carbon fixation; ribulose bisophosphate carboxylase 3165853 rbcL 3674284 rbcL Nitrobacter winogradskyi Nb-255 ribulose bisophosphate carboxylase YP_319531.1 3164384 R 323098 CDS YP_319532.1 75677111 3674285 3166356..3167318 1 NC_007406.1 LysR family transcriptional regulator 3167318 3674285 Nwi_2930 Nitrobacter winogradskyi Nb-255 LysR family transcriptional regulator YP_319532.1 3166356 D 323098 CDS YP_319533.1 75677112 3674286 3167370..3167729 1 NC_007406.1 nitrogen regulatory protein P-II 3167729 3674286 Nwi_2931 Nitrobacter winogradskyi Nb-255 nitrogen regulatory protein P-II YP_319533.1 3167370 D 323098 CDS YP_319534.1 75677113 3674287 3167821..3169338 1 NC_007406.1 carboxysome shell polypeptide, CsoS3 3169338 3674287 Nwi_2932 Nitrobacter winogradskyi Nb-255 carboxysome shell polypeptide, CsoS3 YP_319534.1 3167821 D 323098 CDS YP_319535.1 75677114 3674288 3170160..3170693 1 NC_007406.1 ParB-like nuclease 3170693 3674288 Nwi_2933 Nitrobacter winogradskyi Nb-255 ParB-like nuclease YP_319535.1 3170160 D 323098 CDS YP_319536.1 75677115 3674289 3170987..3172111 1 NC_007406.1 trypsin-like serine protease 3172111 3674289 Nwi_2934 Nitrobacter winogradskyi Nb-255 trypsin-like serine protease YP_319536.1 3170987 D 323098 CDS YP_319537.1 75677116 3674290 complement(3173112..3173627) 1 NC_007406.1 hypothetical protein 3173627 3674290 Nwi_2935 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319537.1 3173112 R 323098 CDS YP_319538.1 75677117 3674291 complement(3173713..3174165) 1 NC_007406.1 heat shock protein Hsp20 3174165 3674291 Nwi_2936 Nitrobacter winogradskyi Nb-255 heat shock protein Hsp20 YP_319538.1 3173713 R 323098 CDS YP_319539.1 75677118 3674292 complement(3174408..3174650) 1 NC_007406.1 hypothetical protein 3174650 3674292 Nwi_2937 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319539.1 3174408 R 323098 CDS YP_319540.1 75677119 3674293 3174778..3175032 1 NC_007406.1 hypothetical protein 3175032 3674293 Nwi_2938 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319540.1 3174778 D 323098 CDS YP_319541.1 75677120 3674294 3175004..3175330 1 NC_007406.1 heat shock protein Hsp20 3175330 3674294 Nwi_2939 Nitrobacter winogradskyi Nb-255 heat shock protein Hsp20 YP_319541.1 3175004 D 323098 CDS YP_319542.1 75677121 3674295 3175421..3175927 1 NC_007406.1 heat shock protein Hsp20 3175927 3674295 Nwi_2940 Nitrobacter winogradskyi Nb-255 heat shock protein Hsp20 YP_319542.1 3175421 D 323098 CDS YP_319543.1 75677122 3674296 complement(3176503..3177483) 1 NC_007406.1 Fis family transcriptional regulator 3177483 3674296 Nwi_2941 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_319543.1 3176503 R 323098 CDS YP_319544.1 75677123 3674297 complement(3177480..3177854) 1 NC_007406.1 transposase IS3/IS911 3177854 3674297 Nwi_2942 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_319544.1 3177480 R 323098 CDS YP_319545.1 75677124 3675873 3178224..3178634 1 NC_007406.1 hypothetical protein 3178634 3675873 Nwi_2943 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319545.1 3178224 D 323098 CDS YP_319546.1 75677125 3675874 3178639..3179151 1 NC_007406.1 bacteriophage-like protein 3179151 3675874 Nwi_2944 Nitrobacter winogradskyi Nb-255 bacteriophage-like protein YP_319546.1 3178639 D 323098 CDS YP_319547.1 75677126 3675875 3179148..3180800 1 NC_007406.1 resolvase 3180800 3675875 Nwi_2945 Nitrobacter winogradskyi Nb-255 resolvase YP_319547.1 3179148 D 323098 CDS YP_319548.1 75677127 3674549 complement(3181129..3181536) 1 NC_007406.1 response regulator receiver 3181536 3674549 Nwi_2946 Nitrobacter winogradskyi Nb-255 response regulator receiver YP_319548.1 3181129 R 323098 CDS YP_319549.1 75677128 3674550 3181663..3182550 1 NC_007406.1 N-formylglutamate amidohydrolase 3182550 3674550 Nwi_2947 Nitrobacter winogradskyi Nb-255 N-formylglutamate amidohydrolase YP_319549.1 3181663 D 323098 CDS YP_319550.1 75677129 3674551 3182812..3183162 1 NC_007406.1 transposase 3183162 3674551 Nwi_2948 Nitrobacter winogradskyi Nb-255 transposase YP_319550.1 3182812 D 323098 CDS YP_319551.1 75677130 3674552 3183114..3183755 1 NC_007406.1 ISRm2011-2 transposase 3183755 3674552 Nwi_2949 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_319551.1 3183114 D 323098 CDS YP_319552.1 75677131 3674553 3184287..3185072 1 NC_007406.1 histidinol-phosphate phosphatase 3185072 3674553 Nwi_2950 Nitrobacter winogradskyi Nb-255 histidinol-phosphate phosphatase YP_319552.1 3184287 D 323098 CDS YP_319553.1 75677132 3674554 complement(3185229..3186263) 1 NC_007406.1 lysophospholipase 3186263 3674554 Nwi_2951 Nitrobacter winogradskyi Nb-255 lysophospholipase YP_319553.1 3185229 R 323098 CDS YP_319554.1 75677133 3674555 3186384..3186845 1 NC_007406.1 heat shock protein Hsp20 3186845 3674555 Nwi_2952 Nitrobacter winogradskyi Nb-255 heat shock protein Hsp20 YP_319554.1 3186384 D 323098 CDS YP_319555.1 75677134 3674556 3187299..3192089 1 NC_007406.1 glutamine amidotransferase, class-II 3192089 3674556 Nwi_2953 Nitrobacter winogradskyi Nb-255 glutamine amidotransferase, class-II YP_319555.1 3187299 D 323098 CDS YP_319556.1 75677135 3674557 3192277..3193731 1 NC_007406.1 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 3193731 gltD 3674557 gltD Nitrobacter winogradskyi Nb-255 glutamate synthase subunit beta YP_319556.1 3192277 D 323098 CDS YP_319557.1 75677136 3674558 3194169..3194522 1 NC_007406.1 hypothetical protein 3194522 3674558 Nwi_2955 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319557.1 3194169 D 323098 CDS YP_319558.1 75677137 3674559 complement(3194653..3196269) 1 NC_007406.1 hypothetical protein 3196269 3674559 Nwi_2956 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319558.1 3194653 R 323098 CDS YP_319559.1 75677138 3674560 complement(3196435..3197847) 1 NC_007406.1 lytic murein transglycosylase 3197847 3674560 Nwi_2957 Nitrobacter winogradskyi Nb-255 lytic murein transglycosylase YP_319559.1 3196435 R 323098 CDS YP_319560.1 75677139 3674561 3198386..3199261 1 NC_007406.1 UTP-glucose-1-phosphate uridylyltransferase 3199261 3674561 Nwi_2958 Nitrobacter winogradskyi Nb-255 UTP-glucose-1-phosphate uridylyltransferase YP_319560.1 3198386 D 323098 CDS YP_319561.1 75677140 3674562 3199264..3199527 1 NC_007406.1 hypothetical protein 3199527 3674562 Nwi_2959 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319561.1 3199264 D 323098 CDS YP_319562.1 75677141 3675834 3199706..3200119 1 NC_007406.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 3200119 3675834 Nwi_2960 Nitrobacter winogradskyi Nb-255 methionine sulfoxide reductase B YP_319562.1 3199706 D 323098 CDS YP_319563.1 75677142 3675835 3200351..3200638 1 NC_007406.1 hypothetical protein 3200638 3675835 Nwi_2961 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319563.1 3200351 D 323098 CDS YP_319564.1 75677143 3675836 complement(3200730..3201272) 1 NC_007406.1 hypothetical protein 3201272 3675836 Nwi_2962 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319564.1 3200730 R 323098 CDS YP_319565.1 75677144 3675837 3201543..3201758 1 NC_007406.1 hypothetical protein 3201758 3675837 Nwi_2963 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319565.1 3201543 D 323098 CDS YP_319566.1 75677145 3675838 complement(3202053..3203675) 1 NC_007406.1 hypothetical protein 3203675 3675838 Nwi_2964 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319566.1 3202053 R 323098 CDS YP_319567.1 75677146 3675839 complement(3203727..3205019) 1 NC_007406.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 3205019 3675839 Nwi_2965 Nitrobacter winogradskyi Nb-255 adenylosuccinate synthetase YP_319567.1 3203727 R 323098 CDS YP_319568.1 75677147 3675840 complement(3205016..3205273) 1 NC_007406.1 hypothetical protein 3205273 3675840 Nwi_2966 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319568.1 3205016 R 323098 CDS YP_319569.1 75677148 3675841 3205430..3206983 1 NC_007406.1 peptidase S10, serine carboxypeptidase 3206983 3675841 Nwi_2967 Nitrobacter winogradskyi Nb-255 peptidase S10, serine carboxypeptidase YP_319569.1 3205430 D 323098 CDS YP_319570.1 75677149 3675842 complement(3207073..3208662) 1 NC_007406.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 3208662 3675842 Nwi_2968 Nitrobacter winogradskyi Nb-255 D-3-phosphoglycerate dehydrogenase YP_319570.1 3207073 R 323098 CDS YP_319571.1 75677150 3675843 complement(3208869..3210041) 1 NC_007406.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; phosphoserine aminotransferase 3210041 3675843 Nwi_2969 Nitrobacter winogradskyi Nb-255 phosphoserine aminotransferase YP_319571.1 3208869 R 323098 CDS YP_319572.1 75677151 3675844 complement(3210235..3211065) 1 NC_007406.1 hypothetical protein 3211065 3675844 Nwi_2970 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319572.1 3210235 R 323098 CDS YP_319573.1 75677152 3675845 complement(3211269..3212123) 1 NC_007406.1 hypothetical protein 3212123 3675845 Nwi_2971 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319573.1 3211269 R 323098 CDS YP_319574.1 75677153 3675846 complement(3212266..3213534) 1 NC_007406.1 major facilitator transporter 3213534 3675846 Nwi_2972 Nitrobacter winogradskyi Nb-255 major facilitator transporter YP_319574.1 3212266 R 323098 CDS YP_319575.1 75677154 3675847 complement(3213800..3215146) 1 NC_007406.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 3215146 glmM 3675847 glmM Nitrobacter winogradskyi Nb-255 phosphoglucosamine mutase YP_319575.1 3213800 R 323098 CDS YP_319576.1 75677155 3675848 complement(3215549..3215746) 1 NC_007406.1 hypothetical protein 3215746 3675848 Nwi_2974 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319576.1 3215549 R 323098 CDS YP_319577.1 75677156 3675849 complement(3216030..3217910) 1 NC_007406.1 ferrous iron transport protein B 3217910 3675849 Nwi_2975 Nitrobacter winogradskyi Nb-255 ferrous iron transport protein B YP_319577.1 3216030 R 323098 CDS YP_319578.1 75677157 3675850 complement(3217907..3218131) 1 NC_007406.1 hypothetical protein 3218131 3675850 Nwi_2976 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319578.1 3217907 R 323098 CDS YP_319579.1 75677158 3675851 complement(3218479..3219318) 1 NC_007406.1 shikimate/quinate 5-dehydrogenase 3219318 3675851 Nwi_2977 Nitrobacter winogradskyi Nb-255 shikimate/quinate 5-dehydrogenase YP_319579.1 3218479 R 323098 CDS YP_319580.1 75677159 3675852 complement(3219524..3221614) 1 NC_007406.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 3221614 3675852 Nwi_2978 Nitrobacter winogradskyi Nb-255 elongation factor G YP_319580.1 3219524 R 323098 CDS YP_319581.1 75677160 3675853 complement(3221926..3222474) 1 NC_007406.1 hypothetical protein 3222474 3675853 Nwi_2979 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319581.1 3221926 R 323098 CDS YP_319582.1 75677161 3675364 complement(3222711..3223913) 1 NC_007406.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 3223913 3675364 Nwi_2980 Nitrobacter winogradskyi Nb-255 aspartate aminotransferase YP_319582.1 3222711 R 323098 CDS YP_319583.1 75677162 3675365 3224352..3225002 1 NC_007406.1 glutathione S-transferase 3225002 3675365 Nwi_2981 Nitrobacter winogradskyi Nb-255 glutathione S-transferase YP_319583.1 3224352 D 323098 CDS YP_319584.1 75677163 3675366 3225572..3226720 1 NC_007406.1 hypothetical protein 3226720 3675366 Nwi_2982 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319584.1 3225572 D 323098 CDS YP_319585.1 75677164 3675367 complement(3226762..3227316) 1 NC_007406.1 hypothetical protein 3227316 3675367 Nwi_2983 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319585.1 3226762 R 323098 CDS YP_319586.1 75677165 3675368 complement(3227742..3227948) 1 NC_007406.1 hypothetical protein 3227948 3675368 Nwi_2984 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319586.1 3227742 R 323098 CDS YP_319587.1 75677166 3675369 complement(3227976..3229283) 1 NC_007406.1 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase 3229283 3675369 Nwi_2985 Nitrobacter winogradskyi Nb-255 isocitrate lyase YP_319587.1 3227976 R 323098 CDS YP_319588.1 75677167 3675370 3229453..3230904 1 NC_007406.1 XRE family transcriptional regulator 3230904 3675370 Nwi_2986 Nitrobacter winogradskyi Nb-255 XRE family transcriptional regulator YP_319588.1 3229453 D 323098 CDS YP_319589.1 75677168 3675371 complement(3230988..3231554) 1 NC_007406.1 cytochrome c, class I 3231554 3675371 Nwi_2987 Nitrobacter winogradskyi Nb-255 cytochrome c, class I YP_319589.1 3230988 R 323098 CDS YP_319590.1 75677169 3675372 complement(3231541..3232818) 1 NC_007406.1 oxidoreductase, molybdopterin binding 3232818 3675372 Nwi_2988 Nitrobacter winogradskyi Nb-255 oxidoreductase, molybdopterin binding YP_319590.1 3231541 R 323098 CDS YP_319591.1 75677170 3675373 3233183..3233686 1 NC_007406.1 hypothetical protein 3233686 3675373 Nwi_2989 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319591.1 3233183 D 323098 CDS YP_319592.1 75677171 3675374 complement(3233767..3235341) 1 NC_007406.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 3235341 glpD 3675374 glpD Nitrobacter winogradskyi Nb-255 glycerol-3-phosphate dehydrogenase YP_319592.1 3233767 R 323098 CDS YP_319593.1 75677172 3675375 complement(3235503..3235847) 1 NC_007406.1 hypothetical protein 3235847 3675375 Nwi_2991 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319593.1 3235503 R 323098 CDS YP_319594.1 75677173 3675376 complement(3236070..3236519) 1 NC_007406.1 thioesterase 3236519 3675376 Nwi_2992 Nitrobacter winogradskyi Nb-255 thioesterase YP_319594.1 3236070 R 323098 CDS YP_319595.1 75677174 3675377 complement(3236569..3238659) 1 NC_007406.1 3-hydroxyacyl-CoA dehydrogenase 3238659 3675377 Nwi_2993 Nitrobacter winogradskyi Nb-255 3-hydroxyacyl-CoA dehydrogenase YP_319595.1 3236569 R 323098 CDS YP_319596.1 75677175 3675378 complement(3238667..3239950) 1 NC_007406.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; acetyl-CoA acetyltransferase 3239950 3675378 Nwi_2994 Nitrobacter winogradskyi Nb-255 acetyl-CoA acetyltransferase YP_319596.1 3238667 R 323098 CDS YP_319597.1 75677176 3675379 complement(3239950..3242217) 1 NC_007406.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 3242217 fadE 3675379 fadE Nitrobacter winogradskyi Nb-255 acyl-CoA dehydrogenase YP_319597.1 3239950 R 323098 CDS YP_319598.1 75677177 3675380 3242656..3244752 1 NC_007406.1 methyl-accepting chemotaxis protein 3244752 3675380 Nwi_2996 Nitrobacter winogradskyi Nb-255 methyl-accepting chemotaxis protein YP_319598.1 3242656 D 323098 CDS YP_319599.1 75677178 3675381 3244955..3245170 1 NC_007406.1 CsbD-like protein 3245170 3675381 Nwi_2997 Nitrobacter winogradskyi Nb-255 CsbD-like protein YP_319599.1 3244955 D 323098 CDS YP_319600.1 75677179 3675382 3245308..3246075 1 NC_007406.1 rhodanese-like sulfurtransferase 3246075 3675382 Nwi_2998 Nitrobacter winogradskyi Nb-255 rhodanese-like sulfurtransferase YP_319600.1 3245308 D 323098 CDS YP_319601.1 75677180 3675026 3246068..3246280 1 NC_007406.1 hypothetical protein 3246280 3675026 Nwi_2999 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319601.1 3246068 D 323098 CDS YP_319602.1 75677181 3675027 3246425..3247741 1 NC_007406.1 hypothetical protein 3247741 3675027 Nwi_3000 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319602.1 3246425 D 323098 CDS YP_319603.1 75677182 3675028 complement(3247773..3248759) 1 NC_007406.1 2-nitropropane dioxygenase 3248759 3675028 Nwi_3001 Nitrobacter winogradskyi Nb-255 2-nitropropane dioxygenase YP_319603.1 3247773 R 323098 CDS YP_319604.1 75677183 3675029 3248790..3249728 1 NC_007406.1 hypothetical protein 3249728 3675029 Nwi_3002 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319604.1 3248790 D 323098 CDS YP_319605.1 75677184 3675030 3249908..3250195 1 NC_007406.1 hypothetical protein 3250195 3675030 Nwi_3003 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319605.1 3249908 D 323098 CDS YP_319606.1 75677185 3675031 3250656..3253904 1 NC_007406.1 hypothetical protein 3253904 3675031 Nwi_3004 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319606.1 3250656 D 323098 CDS YP_319607.1 75677186 3675032 complement(3253873..3254136) 1 NC_007406.1 hypothetical protein 3254136 3675032 Nwi_3005 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319607.1 3253873 R 323098 CDS YP_319608.1 75677187 3675033 3254250..3255068 1 NC_007406.1 formate/nitrite transporter 3255068 3675033 Nwi_3006 Nitrobacter winogradskyi Nb-255 formate/nitrite transporter YP_319608.1 3254250 D 323098 CDS YP_319609.1 75677188 3675034 3256019..3256369 1 NC_007406.1 transposase 3256369 3675034 Nwi_3007 Nitrobacter winogradskyi Nb-255 transposase YP_319609.1 3256019 D 323098 CDS YP_319610.1 75677189 3675035 3256321..3256962 1 NC_007406.1 ISRm2011-2 transposase 3256962 3675035 Nwi_3008 Nitrobacter winogradskyi Nb-255 ISRm2011-2 transposase YP_319610.1 3256321 D 323098 CDS YP_319611.1 75677190 3675036 complement(3257416..3257841) 1 NC_007406.1 PadR family transcriptional regulator 3257841 3675036 Nwi_3009 Nitrobacter winogradskyi Nb-255 PadR family transcriptional regulator YP_319611.1 3257416 R 323098 CDS YP_319612.1 75677191 3675037 complement(3259073..3259363) 1 NC_007406.1 hypothetical protein 3259363 3675037 Nwi_3010 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319612.1 3259073 R 323098 CDS YP_319613.1 75677192 3675039 complement(3259751..3260008) 1 NC_007406.1 hypothetical protein 3260008 3675039 Nwi_3011 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319613.1 3259751 R 323098 CDS YP_319614.1 75677193 3675040 complement(3260152..3260460) 1 NC_007406.1 serinethreonine protein phosphatase 3260460 3675040 Nwi_3012 Nitrobacter winogradskyi Nb-255 serinethreonine protein phosphatase YP_319614.1 3260152 R 323098 CDS YP_319615.1 75677194 3675041 complement(3260522..3260890) 1 NC_007406.1 transposase, IS4 3260890 3675041 Nwi_3013 Nitrobacter winogradskyi Nb-255 transposase, IS4 YP_319615.1 3260522 R 323098 CDS YP_319616.1 75677195 3675042 complement(3260905..3261303) 1 NC_007406.1 transposase 3261303 3675042 Nwi_3014 Nitrobacter winogradskyi Nb-255 transposase YP_319616.1 3260905 R 323098 CDS YP_319617.1 75677196 3675043 complement(3261324..3261677) 1 NC_007406.1 serine/threonine protein phosphatase 3261677 3675043 Nwi_3015 Nitrobacter winogradskyi Nb-255 serine/threonine protein phosphatase YP_319617.1 3261324 R 323098 CDS YP_319618.1 75677197 3676386 complement(3261757..3263301) 1 NC_007406.1 thiamine-pyrophosphate requiring enzyme; hypothetical protein 3263301 3676386 Nwi_3016 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319618.1 3261757 R 323098 CDS YP_319619.1 75677198 3676387 3263528..3264091 1 NC_007406.1 ErfK/YbiS/YcfS/YnhG 3264091 3676387 Nwi_3017 Nitrobacter winogradskyi Nb-255 ErfK/YbiS/YcfS/YnhG YP_319619.1 3263528 D 323098 CDS YP_319620.1 75677199 3676388 complement(3264190..3265413) 1 NC_007406.1 acyl-CoA dehydrogenase 3265413 3676388 Nwi_3018 Nitrobacter winogradskyi Nb-255 acyl-CoA dehydrogenase YP_319620.1 3264190 R 323098 CDS YP_319621.1 75677200 3676389 3265668..3267176 1 NC_007406.1 hypothetical protein 3267176 3676389 Nwi_3019 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319621.1 3265668 D 323098 CDS YP_319622.1 75677201 3676390 3267173..3268219 1 NC_007406.1 hypothetical protein 3268219 3676390 Nwi_3020 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319622.1 3267173 D 323098 CDS YP_319623.1 75677202 3676391 complement(3268446..3270194) 1 NC_007406.1 hypothetical protein 3270194 3676391 Nwi_3021 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319623.1 3268446 R 323098 CDS YP_319624.1 75677203 3676392 3270578..3271780 1 NC_007406.1 oxidoreductase, molybdopterin binding 3271780 3676392 Nwi_3022 Nitrobacter winogradskyi Nb-255 oxidoreductase, molybdopterin binding YP_319624.1 3270578 D 323098 CDS YP_319625.1 75677204 3676393 3271792..3272124 1 NC_007406.1 cytochrome c oxidoreductase subunit B 3272124 3676393 Nwi_3023 Nitrobacter winogradskyi Nb-255 cytochrome c oxidoreductase subunit B YP_319625.1 3271792 D 323098 CDS YP_319626.1 75677205 3676394 complement(3272481..3273962) 1 NC_007406.1 glycosyl transferase 3273962 3676394 Nwi_3024 Nitrobacter winogradskyi Nb-255 glycosyl transferase YP_319626.1 3272481 R 323098 CDS YP_319627.1 75677206 3676395 complement(3274143..3275936) 1 NC_007406.1 glycoside hydrolase 15-related 3275936 3676395 Nwi_3025 Nitrobacter winogradskyi Nb-255 glycoside hydrolase 15-related YP_319627.1 3274143 R 323098 CDS YP_319628.1 75677207 3676396 complement(3275933..3276742) 1 NC_007406.1 trehalose-phosphatase 3276742 3676396 Nwi_3026 Nitrobacter winogradskyi Nb-255 trehalose-phosphatase YP_319628.1 3275933 R 323098 CDS YP_319629.1 75677208 3676397 complement(3276739..3278184) 1 NC_007406.1 major facilitator transporter 3278184 3676397 Nwi_3027 Nitrobacter winogradskyi Nb-255 major facilitator transporter YP_319629.1 3276739 R 323098 CDS YP_319630.1 75677209 3676398 3278625..3279266 1 NC_007406.1 OmpA/MotB 3279266 3676398 Nwi_3028 Nitrobacter winogradskyi Nb-255 OmpA/MotB YP_319630.1 3278625 D 323098 CDS YP_319631.1 75677210 3676399 3279481..3281064 1 NC_007406.1 peptidase C14 3281064 3676399 Nwi_3029 Nitrobacter winogradskyi Nb-255 peptidase C14 YP_319631.1 3279481 D 323098 CDS YP_319632.1 75677211 3676400 3281173..3282093 1 NC_007406.1 secretion protein HlyD 3282093 3676400 Nwi_3030 Nitrobacter winogradskyi Nb-255 secretion protein HlyD YP_319632.1 3281173 D 323098 CDS YP_319633.1 75677212 3676401 3282093..3285221 1 NC_007406.1 acriflavin resistance protein 3285221 3676401 Nwi_3031 Nitrobacter winogradskyi Nb-255 acriflavin resistance protein YP_319633.1 3282093 D 323098 CDS YP_319634.1 75677213 3676402 complement(3285439..3286113) 1 NC_007406.1 Crp/Fnr family transcriptional regulator 3286113 3676402 Nwi_3032 Nitrobacter winogradskyi Nb-255 Crp/Fnr family transcriptional regulator YP_319634.1 3285439 R 323098 CDS YP_319635.1 75677214 3676403 3286399..3288348 1 NC_007406.1 hypothetical protein 3288348 3676403 Nwi_3033 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319635.1 3286399 D 323098 CDS YP_319636.1 75677215 3676404 complement(3288524..3289138) 1 NC_007406.1 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 3289138 3676404 Nwi_3034 Nitrobacter winogradskyi Nb-255 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_319636.1 3288524 R 323098 CDS YP_319637.1 75677216 3676405 complement(3289280..3291028) 1 NC_007406.1 hypothetical protein 3291028 3676405 Nwi_3035 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319637.1 3289280 R 323098 CDS YP_319638.1 75677217 3676345 3291540..3292427 1 NC_007406.1 peptidase C14, caspase catalytic subunit p20 3292427 3676345 Nwi_3036 Nitrobacter winogradskyi Nb-255 peptidase C14, caspase catalytic subunit p20 YP_319638.1 3291540 D 323098 CDS YP_319639.1 75677218 3676346 complement(3292619..3292987) 1 NC_007406.1 transposase, IS4 3292987 3676346 Nwi_3037 Nitrobacter winogradskyi Nb-255 transposase, IS4 YP_319639.1 3292619 R 323098 CDS YP_319640.1 75677219 3676347 complement(3293002..3293400) 1 NC_007406.1 transposase 3293400 3676347 Nwi_3038 Nitrobacter winogradskyi Nb-255 transposase YP_319640.1 3293002 R 323098 CDS YP_319641.1 75677220 3676348 complement(3293456..3294361) 1 NC_007406.1 secretion protein HlyD 3294361 3676348 Nwi_3039 Nitrobacter winogradskyi Nb-255 secretion protein HlyD YP_319641.1 3293456 R 323098 CDS YP_319642.1 75677221 3676349 complement(3294495..3296942) 1 NC_007406.1 adenylyl cyclase 3296942 3676349 Nwi_3040 Nitrobacter winogradskyi Nb-255 adenylyl cyclase YP_319642.1 3294495 R 323098 CDS YP_319643.1 75677222 3676350 complement(3297611..3297871) 1 NC_007406.1 hypothetical protein 3297871 3676350 Nwi_3041 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319643.1 3297611 R 323098 CDS YP_319644.1 75677223 3676351 complement(3298326..3299363) 1 NC_007406.1 hypothetical protein 3299363 3676351 Nwi_3042 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319644.1 3298326 R 323098 CDS YP_319645.1 75677224 3676352 complement(3299581..3302040) 1 NC_007406.1 TonB-dependent siderophore receptor 3302040 3676352 Nwi_3043 Nitrobacter winogradskyi Nb-255 TonB-dependent siderophore receptor YP_319645.1 3299581 R 323098 CDS YP_319646.1 75677225 3676353 complement(3302144..3303100) 1 NC_007406.1 FecR protein 3303100 3676353 Nwi_3044 Nitrobacter winogradskyi Nb-255 FecR protein YP_319646.1 3302144 R 323098 CDS YP_319647.1 75677226 3676354 complement(3303193..3303741) 1 NC_007406.1 fec I like protein 3303741 3676354 Nwi_3045 Nitrobacter winogradskyi Nb-255 fec I like protein YP_319647.1 3303193 R 323098 CDS YP_319648.1 75677227 3676356 3308899..3309219 1 NC_007406.1 hypothetical protein 3309219 3676356 Nwi_3047 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319648.1 3308899 D 323098 CDS YP_319649.1 75677228 3676357 3309230..3310306 1 NC_007406.1 Fe3+-siderophore ABC transporter permease 3310306 3676357 Nwi_3048 Nitrobacter winogradskyi Nb-255 Fe3+-siderophore ABC transporter permease YP_319649.1 3309230 D 323098 CDS YP_319650.1 75677229 3676358 3310303..3311085 1 NC_007406.1 ABC transporter ATPase 3311085 3676358 Nwi_3049 Nitrobacter winogradskyi Nb-255 ABC transporter ATPase YP_319650.1 3310303 D 323098 CDS YP_319651.1 75677230 3676359 3311091..3311990 1 NC_007406.1 ABC-type Fe3+-hydroxamate transport system periplasmic component 3311990 3676359 Nwi_3050 Nitrobacter winogradskyi Nb-255 ABC-type Fe3+-hydroxamate transport system periplasmic component YP_319651.1 3311091 D 323098 CDS YP_319652.1 75677231 3676360 3312571..3314679 1 NC_007406.1 TonB-dependent receptor 3314679 3676360 Nwi_3051 Nitrobacter winogradskyi Nb-255 TonB-dependent receptor YP_319652.1 3312571 D 323098 CDS YP_319653.1 75677232 3676361 3315007..3315558 1 NC_007406.1 TetR family transcriptional regulator 3315558 3676361 Nwi_3052 Nitrobacter winogradskyi Nb-255 TetR family transcriptional regulator YP_319653.1 3315007 D 323098 CDS YP_319654.1 75677233 3676362 3315607..3316851 1 NC_007406.1 major facilitator transporter 3316851 3676362 Nwi_3053 Nitrobacter winogradskyi Nb-255 major facilitator transporter YP_319654.1 3315607 D 323098 CDS YP_319655.1 75677234 3676363 3317185..3317385 1 NC_007406.1 cold-shock protein, DNA-binding 3317385 3676363 Nwi_3054 Nitrobacter winogradskyi Nb-255 cold-shock protein, DNA-binding YP_319655.1 3317185 D 323098 CDS YP_319656.1 75677235 3674519 3317658..3320663 1 NC_007406.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichia coli this protein self regulates transcription via a DNA-binding domain at the N-terminus but the proteins from this group do not and in addition appear to have a truncated C-terminal domain; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 3320663 3674519 Nwi_3055 Nitrobacter winogradskyi Nb-255 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_319656.1 3317658 D 323098 CDS YP_319657.1 75677236 3674520 complement(3320846..3321457) 1 NC_007406.1 Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 3321457 3674520 Nwi_3056 Nitrobacter winogradskyi Nb-255 RNA polymerase sigma factor YP_319657.1 3320846 R 323098 CDS YP_319658.1 75677237 3674522 complement(3322455..3324197) 1 NC_007406.1 phage head-tail adaptor 3324197 3674522 Nwi_3058 Nitrobacter winogradskyi Nb-255 phage head-tail adaptor YP_319658.1 3322455 R 323098 CDS YP_319659.1 75677238 3674523 complement(3324314..3324907) 1 NC_007406.1 polyhydroxyalkanoate synthesis repressor PhaR 3324907 3674523 Nwi_3059 Nitrobacter winogradskyi Nb-255 polyhydroxyalkanoate synthesis repressor PhaR YP_319659.1 3324314 R 323098 CDS YP_319660.1 75677239 3674524 3325200..3326378 1 NC_007406.1 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; in Rhizobia and Ralstonia is involved in PHB biosynthesis; acetyl-CoA acetyltransferase 3326378 3674524 Nwi_3060 Nitrobacter winogradskyi Nb-255 acetyl-CoA acetyltransferase YP_319660.1 3325200 D 323098 CDS YP_319661.1 75677240 3674525 3326524..3327249 1 NC_007406.1 acetoacetyl-CoA reductase 3327249 3674525 Nwi_3061 Nitrobacter winogradskyi Nb-255 acetoacetyl-CoA reductase YP_319661.1 3326524 D 323098 CDS YP_319662.1 75677241 3674526 3327410..3328276 1 NC_007406.1 hypothetical protein 3328276 3674526 Nwi_3062 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319662.1 3327410 D 323098 CDS YP_319663.1 75677242 3674527 complement(3328361..3329719) 1 NC_007406.1 major facilitator transporter 3329719 3674527 Nwi_3063 Nitrobacter winogradskyi Nb-255 major facilitator transporter YP_319663.1 3328361 R 323098 CDS YP_319664.1 75677243 3674528 3330017..3330580 1 NC_007406.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 3330580 def 3674528 def Nitrobacter winogradskyi Nb-255 peptide deformylase YP_319664.1 3330017 D 323098 CDS YP_319665.1 75677244 3674529 3330613..3331557 1 NC_007406.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 3331557 fmt 3674529 fmt Nitrobacter winogradskyi Nb-255 methionyl-tRNA formyltransferase YP_319665.1 3330613 D 323098 CDS YP_319666.1 75677245 3674530 3331557..3332324 1 NC_007406.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 3332324 truA 3674530 truA Nitrobacter winogradskyi Nb-255 tRNA pseudouridine synthase A YP_319666.1 3331557 D 323098 CDS YP_319667.1 75677246 3674531 complement(3332360..3332914) 1 NC_007406.1 5'-methylthioadenosine nucleosidase 3332914 3674531 Nwi_3067 Nitrobacter winogradskyi Nb-255 5'-methylthioadenosine nucleosidase YP_319667.1 3332360 R 323098 CDS YP_319668.1 75677247 3674532 complement(3332911..3334080) 1 NC_007406.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 3334080 3674532 Nwi_3068 Nitrobacter winogradskyi Nb-255 succinyl-diaminopimelate desuccinylase YP_319668.1 3332911 R 323098 CDS YP_319669.1 75677248 3674533 complement(3334088..3334933) 1 NC_007406.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 3334933 dapD 3674533 dapD Nitrobacter winogradskyi Nb-255 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_319669.1 3334088 R 323098 CDS YP_319670.1 75677249 3674534 complement(3335007..3335723) 1 NC_007406.1 pyrimidine 5-nucleotidase 3335723 3674534 Nwi_3070 Nitrobacter winogradskyi Nb-255 pyrimidine 5-nucleotidase YP_319670.1 3335007 R 323098 CDS YP_319671.1 75677250 3674535 complement(3335720..3336616) 1 NC_007406.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 3336616 3674535 Nwi_3071 Nitrobacter winogradskyi Nb-255 acetylglutamate kinase YP_319671.1 3335720 R 323098 CDS YP_319672.1 75677251 3674536 complement(3336861..3337265) 1 NC_007406.1 hypothetical protein 3337265 3674536 Nwi_3072 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319672.1 3336861 R 323098 CDS YP_319673.1 75677252 3674537 complement(3337262..3337915) 1 NC_007406.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 3337915 engB 3674537 engB Nitrobacter winogradskyi Nb-255 ribosome biogenesis GTP-binding protein YsxC YP_319673.1 3337262 R 323098 CDS YP_319674.1 75677253 3674538 complement(3338066..3339910) 1 NC_007406.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 3339910 3674538 Nwi_3074 Nitrobacter winogradskyi Nb-255 inner membrane protein translocase component YidC YP_319674.1 3338066 R 323098 CDS YP_319675.1 75677254 3675400 complement(3339983..3340318) 1 NC_007406.1 ribonuclease P protein 3340318 3675400 Nwi_3075 Nitrobacter winogradskyi Nb-255 ribonuclease P protein YP_319675.1 3339983 R 323098 CDS YP_319676.2 162139840 3675401 complement(3340341..3340475) 1 NC_007406.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 3340475 rpmH 3675401 rpmH Nitrobacter winogradskyi Nb-255 50S ribosomal protein L34 YP_319676.2 3340341 R 323098 CDS YP_319677.1 75677256 3675402 3340794..3342272 1 NC_007406.1 Signal transduction histidine kinase 3342272 3675402 Nwi_3077 Nitrobacter winogradskyi Nb-255 Signal transduction histidine kinase YP_319677.1 3340794 D 323098 CDS YP_319678.1 75677257 3675404 complement(3342676..3342957) 1 NC_007406.1 hypothetical protein 3342957 3675404 Nwi_3078 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319678.1 3342676 R 323098 CDS YP_319679.1 75677258 3675405 3343253..3343765 1 NC_007406.1 fec I like protein 3343765 3675405 Nwi_3079 Nitrobacter winogradskyi Nb-255 fec I like protein YP_319679.1 3343253 D 323098 CDS YP_319680.1 75677259 3675406 3343976..3344929 1 NC_007406.1 FecR protein 3344929 3675406 Nwi_3080 Nitrobacter winogradskyi Nb-255 FecR protein YP_319680.1 3343976 D 323098 CDS YP_319681.1 75677260 3675408 complement(3347998..3349545) 1 NC_007406.1 hypothetical protein 3349545 3675408 Nwi_3082 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319681.1 3347998 R 323098 CDS YP_319682.1 75677261 3675409 3349775..3350050 1 NC_007406.1 transcriptional regulator AbrB 3350050 3675409 Nwi_3083 Nitrobacter winogradskyi Nb-255 transcriptional regulator AbrB YP_319682.1 3349775 D 323098 CDS YP_319683.1 75677262 3675410 3350037..3350426 1 NC_007406.1 twitching motility protein PilT 3350426 3675410 Nwi_3084 Nitrobacter winogradskyi Nb-255 twitching motility protein PilT YP_319683.1 3350037 D 323098 CDS YP_319684.1 75677263 3675411 complement(3350487..3350729) 1 NC_007406.1 hypothetical protein 3350729 3675411 Nwi_3085 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319684.1 3350487 R 323098 CDS YP_319685.1 75677264 3675412 complement(3350938..3351918) 1 NC_007406.1 Fis family transcriptional regulator 3351918 3675412 Nwi_3086 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_319685.1 3350938 R 323098 CDS YP_319686.2 162139839 3675413 complement(3351915..3352289) 1 NC_007406.1 transposase 3352289 3675413 Nwi_3087 Nitrobacter winogradskyi Nb-255 transposase YP_319686.2 3351915 R 323098 CDS YP_319687.1 75677266 3675414 complement(3352201..3352551) 1 NC_007406.1 hypothetical protein 3352551 3675414 Nwi_3088 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319687.1 3352201 R 323098 CDS YP_319688.1 75677267 3675415 complement(3352646..3353755) 1 NC_007406.1 hypothetical protein 3353755 3675415 Nwi_3089 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319688.1 3352646 R 323098 CDS YP_319689.1 75677268 3675416 complement(3354265..3354963) 1 NC_007406.1 hypothetical protein 3354963 3675416 Nwi_3090 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319689.1 3354265 R 323098 CDS YP_319690.1 75677269 3675417 complement(3355012..3355374) 1 NC_007406.1 hypothetical protein 3355374 3675417 Nwi_3091 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319690.1 3355012 R 323098 CDS YP_319691.1 75677270 3676850 complement(3355504..3355797) 1 NC_007406.1 plasmid stabilization system protein 3355797 3676850 Nwi_3092 Nitrobacter winogradskyi Nb-255 plasmid stabilization system protein YP_319691.1 3355504 R 323098 CDS YP_319692.1 75677271 3676851 complement(3355797..3356051) 1 NC_007406.1 helix-turn-helix protein, CopG 3356051 3676851 Nwi_3093 Nitrobacter winogradskyi Nb-255 helix-turn-helix protein, CopG YP_319692.1 3355797 R 323098 CDS YP_319693.1 75677272 3676852 complement(3356164..3356478) 1 NC_007406.1 hypothetical protein 3356478 3676852 Nwi_3094 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319693.1 3356164 R 323098 CDS YP_319694.1 75677273 3676853 complement(3356539..3356796) 1 NC_007406.1 hypothetical protein 3356796 3676853 Nwi_3095 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319694.1 3356539 R 323098 CDS YP_319695.1 75677274 3676854 3357157..3357630 1 NC_007406.1 hypothetical protein 3357630 3676854 Nwi_3096 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319695.1 3357157 D 323098 CDS YP_319696.1 75677275 3676855 3357671..3357820 1 NC_007406.1 hypothetical protein 3357820 3676855 Nwi_3097 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319696.1 3357671 D 323098 CDS YP_319697.1 75677276 3676856 complement(3358048..3358188) 1 NC_007406.1 hypothetical protein 3358188 3676856 Nwi_3098 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319697.1 3358048 R 323098 CDS YP_319698.1 75677277 3676857 complement(3358275..3359714) 1 NC_007406.1 Fis family transcriptional regulator 3359714 3676857 Nwi_3099 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_319698.1 3358275 R 323098 CDS YP_319699.1 75677278 3676858 complement(3360148..3361173) 1 NC_007406.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 3361173 lpxD 3676858 lpxD Nitrobacter winogradskyi Nb-255 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_319699.1 3360148 R 323098 CDS YP_319700.1 75677279 3676859 3362436..3362708 1 NC_007406.1 hypothetical protein 3362708 3676859 Nwi_3101 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319700.1 3362436 D 323098 CDS YP_319701.1 75677280 3676860 3363057..3363431 1 NC_007406.1 hypothetical protein 3363431 3676860 Nwi_3102 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319701.1 3363057 D 323098 CDS YP_319702.1 75677281 3676861 complement(3363537..3364037) 1 NC_007406.1 hypothetical protein 3364037 3676861 Nwi_3103 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319702.1 3363537 R 323098 CDS YP_319703.1 75677282 3676862 complement(3364037..3364288) 1 NC_007406.1 hypothetical protein 3364288 3676862 Nwi_3104 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319703.1 3364037 R 323098 CDS YP_319704.1 75677283 3676863 3364649..3365023 1 NC_007406.1 transposase IS3/IS911 3365023 3676863 Nwi_3105 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_319704.1 3364649 D 323098 CDS YP_319705.1 75677284 3676864 3365020..3366000 1 NC_007406.1 Fis family transcriptional regulator 3366000 3676864 Nwi_3106 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_319705.1 3365020 D 323098 CDS YP_319706.1 75677285 3676865 complement(3366720..3366947) 1 NC_007406.1 hypothetical protein 3366947 3676865 Nwi_3107 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319706.1 3366720 R 323098 CDS YP_319707.1 75677286 3676866 complement(3367692..3368012) 1 NC_007406.1 hypothetical protein 3368012 3676866 Nwi_3108 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319707.1 3367692 R 323098 CDS YP_319708.1 75677287 3676867 complement(3368169..3369302) 1 NC_007406.1 resolvase 3369302 3676867 Nwi_3109 Nitrobacter winogradskyi Nb-255 resolvase YP_319708.1 3368169 R 323098 CDS YP_319709.1 75677288 3676868 3369450..3369761 1 NC_007406.1 hypothetical protein 3369761 3676868 Nwi_3110 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319709.1 3369450 D 323098 CDS YP_319710.1 75677289 3677324 3369761..3370135 1 NC_007406.1 XRE family transcriptional regulator 3370135 3677324 Nwi_3111 Nitrobacter winogradskyi Nb-255 XRE family transcriptional regulator YP_319710.1 3369761 D 323098 CDS YP_319711.1 75677290 3677325 complement(3370265..3371245) 1 NC_007406.1 Fis family transcriptional regulator 3371245 3677325 Nwi_3112 Nitrobacter winogradskyi Nb-255 Fis family transcriptional regulator YP_319711.1 3370265 R 323098 CDS YP_319712.1 75677291 3677326 complement(3371242..3371616) 1 NC_007406.1 transposase IS3/IS911 3371616 3677326 Nwi_3113 Nitrobacter winogradskyi Nb-255 transposase IS3/IS911 YP_319712.1 3371242 R 323098 CDS YP_319713.1 75677292 3677327 complement(3371680..3371970) 1 NC_007406.1 hypothetical protein 3371970 3677327 Nwi_3114 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319713.1 3371680 R 323098 CDS YP_319714.1 75677293 3677328 3372305..3372703 1 NC_007406.1 transposase 3372703 3677328 Nwi_3115 Nitrobacter winogradskyi Nb-255 transposase YP_319714.1 3372305 D 323098 CDS YP_319715.1 75677294 3677329 3372718..3373191 1 NC_007406.1 transposase, IS4 3373191 3677329 Nwi_3116 Nitrobacter winogradskyi Nb-255 transposase, IS4 YP_319715.1 3372718 D 323098 CDS YP_319716.1 75677295 3676086 complement(3373040..3373633) 1 NC_007406.1 hypothetical protein 3373633 3676086 Nwi_3117 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319716.1 3373040 R 323098 CDS YP_319717.1 75677296 3676087 complement(3373612..3373905) 1 NC_007406.1 hypothetical protein 3373905 3676087 Nwi_3118 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319717.1 3373612 R 323098 CDS YP_319718.1 75677297 3676088 3374542..3375570 1 NC_007406.1 DNA-binding protein 3375570 3676088 Nwi_3119 Nitrobacter winogradskyi Nb-255 DNA-binding protein YP_319718.1 3374542 D 323098 CDS YP_319719.1 75677298 3676089 3375563..3376264 1 NC_007406.1 hypothetical protein 3376264 3676089 Nwi_3120 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319719.1 3375563 D 323098 CDS YP_319720.1 75677299 3676090 3376264..3377715 1 NC_007406.1 hypothetical protein 3377715 3676090 Nwi_3121 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319720.1 3376264 D 323098 CDS YP_319721.1 75677300 3676091 3377702..3378556 1 NC_007406.1 hypothetical protein 3378556 3676091 Nwi_3122 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319721.1 3377702 D 323098 CDS YP_319722.1 75677301 3676092 3379174..3379536 1 NC_007406.1 ArsR family transcriptional regulator 3379536 3676092 Nwi_3123 Nitrobacter winogradskyi Nb-255 ArsR family transcriptional regulator YP_319722.1 3379174 D 323098 CDS YP_319723.1 75677302 3676093 3379529..3380071 1 NC_007406.1 low molecular weight phosphotyrosine protein phosphatase 3380071 3676093 Nwi_3124 Nitrobacter winogradskyi Nb-255 low molecular weight phosphotyrosine protein phosphatase YP_319723.1 3379529 D 323098 CDS YP_319724.1 75677303 3676094 3380081..3380506 1 NC_007406.1 arsenate reductase 3380506 3676094 Nwi_3125 Nitrobacter winogradskyi Nb-255 arsenate reductase YP_319724.1 3380081 D 323098 CDS YP_319725.1 75677304 3676095 3380516..3381571 1 NC_007406.1 arsenite efflux pump ACR3 3381571 3676095 Nwi_3126 Nitrobacter winogradskyi Nb-255 arsenite efflux pump ACR3 YP_319725.1 3380516 D 323098 CDS YP_319726.1 75677305 3676096 3381571..3382287 1 NC_007406.1 NADPH-dependent FMN reductase 3382287 3676096 Nwi_3127 Nitrobacter winogradskyi Nb-255 NADPH-dependent FMN reductase YP_319726.1 3381571 D 323098 CDS YP_319727.1 75677306 3676097 complement(3382367..3382678) 1 NC_007406.1 hypothetical protein 3382678 3676097 Nwi_3128 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319727.1 3382367 R 323098 CDS YP_319728.1 75677307 3676098 3382905..3383312 1 NC_007406.1 hypothetical protein 3383312 3676098 Nwi_3129 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319728.1 3382905 D 323098 CDS YP_319729.1 75677308 3676099 3383309..3384730 1 NC_007406.1 secretion protein HlyD 3384730 3676099 Nwi_3130 Nitrobacter winogradskyi Nb-255 secretion protein HlyD YP_319729.1 3383309 D 323098 CDS YP_319730.1 75677309 3676730 3384727..3387903 1 NC_007406.1 heavy metal efflux pump CzcA 3387903 3676730 Nwi_3131 Nitrobacter winogradskyi Nb-255 heavy metal efflux pump CzcA YP_319730.1 3384727 D 323098 CDS YP_319731.1 75677310 3676731 3388211..3388585 1 NC_007406.1 hypothetical protein 3388585 3676731 Nwi_3132 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319731.1 3388211 D 323098 CDS YP_319732.1 75677311 3676732 complement(3388840..3389259) 1 NC_007406.1 MerR family transcriptional regulator 3389259 3676732 Nwi_3133 Nitrobacter winogradskyi Nb-255 MerR family transcriptional regulator YP_319732.1 3388840 R 323098 CDS YP_319733.1 75677312 3676733 3389326..3391464 1 NC_007406.1 heavy metal translocating P-type ATPase 3391464 3676733 Nwi_3134 Nitrobacter winogradskyi Nb-255 heavy metal translocating P-type ATPase YP_319733.1 3389326 D 323098 CDS YP_319734.1 75677313 3676734 complement(3391517..3392596) 1 NC_007406.1 phage integrase 3392596 3676734 Nwi_3135 Nitrobacter winogradskyi Nb-255 phage integrase YP_319734.1 3391517 R 323098 CDS YP_319735.1 75677314 3676735 complement(3392593..3394275) 1 NC_007406.1 phage integrase 3394275 3676735 Nwi_3136 Nitrobacter winogradskyi Nb-255 phage integrase YP_319735.1 3392593 R 323098 CDS YP_319736.1 75677315 3676736 complement(3394776..3395561) 1 NC_007406.1 hypothetical protein 3395561 3676736 Nwi_3137 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319736.1 3394776 R 323098 CDS YP_319737.1 75677316 3677209 3395998..3397683 1 NC_007406.1 resolvase 3397683 3677209 Nwi_3138 Nitrobacter winogradskyi Nb-255 resolvase YP_319737.1 3395998 D 323098 CDS YP_319738.1 75677317 3675790 complement(3398265..3399353) 1 NC_007406.1 metal-dependent phosphohydrolase 3399353 3675790 Nwi_3139 Nitrobacter winogradskyi Nb-255 metal-dependent phosphohydrolase YP_319738.1 3398265 R 323098 CDS YP_319739.1 75677318 3675791 3399573..3400043 1 NC_007406.1 hypothetical protein 3400043 3675791 Nwi_3140 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319739.1 3399573 D 323098 CDS YP_319740.1 75677319 3675792 complement(3400281..3400595) 1 NC_007406.1 hypothetical protein 3400595 3675792 Nwi_3141 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319740.1 3400281 R 323098 CDS YP_319741.1 75677320 3675793 complement(3400611..3400874) 1 NC_007406.1 hypothetical protein 3400874 3675793 Nwi_3142 Nitrobacter winogradskyi Nb-255 hypothetical protein YP_319741.1 3400611 R 323098 CDS YP_319742.1 75677321 3675794 3400955..3401221 1 NC_007406.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 3401221 rpsT 3675794 rpsT Nitrobacter winogradskyi Nb-255 30S ribosomal protein S20 YP_319742.1 3400955 D 323098 CDS