-- dump date 20140619_232002 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_048133.1 50118966 2885612 complement(32..475) 1 NC_004547.2 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 475 mioC 2885612 mioC Pectobacterium atrosepticum SCRI1043 flavodoxin YP_048133.1 32 R 218491 CDS YP_048134.1 50118967 2884106 complement(565..1026) 1 NC_004547.2 transcriptional repressor of asnA which codes for aspartate-ammonia ligase; DNA-binding transcriptional regulator AsnC 1026 asnC 2884106 asnC Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional regulator AsnC YP_048134.1 565 R 218491 CDS YP_048135.1 50118968 2884104 1179..2171 1 NC_004547.2 catalyzes the formation of asparagine from aspartate and ammonia; asparagine synthetase AsnA 2171 asnA 2884104 asnA Pectobacterium atrosepticum SCRI1043 asparagine synthetase AsnA YP_048135.1 1179 D 218491 CDS YP_048136.1 50118969 2885562 complement(2168..3646) 1 NC_004547.2 contains a von Willibrand factor type A domain; stimulates the ATPase activity of RavA; hypothetical protein 3646 yieM 2885562 yieM Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048136.1 2168 R 218491 CDS YP_048137.1 50118970 2885556 complement(3652..5151) 1 NC_004547.2 interacts with LdcI, lysine decarboxylase; may be active in late log/ early stationary phase; regulatory ATPase RavA 5151 2885556 ECA0005 Pectobacterium atrosepticum SCRI1043 regulatory ATPase RavA YP_048137.1 3652 R 218491 CDS YP_048138.1 50118971 2883739 5629..7497 1 NC_004547.2 Responsible for the low-affinity transport of potassium into the cell; involved in potassium ion uptake under hyper-osmotic stress at a low pH; potassium transport protein Kup 7497 trkD 2883739 trkD Pectobacterium atrosepticum SCRI1043 potassium transport protein Kup YP_048138.1 5629 D 218491 CDS YP_048139.1 50118972 2882682 complement(7668..9017) 1 NC_004547.2 Similar to Escherichia coli sensor protein QseC SWALL:QSEC_ECOLI (SWALL:P40719) (449 aa) fasta scores: E(): 7.4e-94, 56.15% id in 447 aa; sensor protein QseC 9017 qseC 2882682 qseC Pectobacterium atrosepticum SCRI1043 sensor protein QseC YP_048139.1 7668 R 218491 CDS YP_048140.1 50118973 2882681 complement(9014..9676) 1 NC_004547.2 Similar to Escherichia coli transcriptional regulatory protein QseB SWALL:QSEB_ECOLI (SWALL:P52076) (219 aa) fasta scores: E(): 3.1e-59, 68.34% id in 218 aa; two-component system response regulator 9676 qseB 2882681 qseB Pectobacterium atrosepticum SCRI1043 two-component system response regulator YP_048140.1 9014 R 218491 CDS YP_048141.1 50118974 2885557 9921..10316 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi outer membrane proteinYgiW or stm3176 or sty3353 SWALL:Q8XGT5 (EMBL:AE008846) (130 aa) fasta scores: E(): 1.8e-27, 63.35% id in 131 aa, and to Yersinia pestis exported protein ypo3027 or y1455 SWALL:Q8ZCG4 (EMBL:AJ414155) (137 aa) fasta scores: E(): 1.4e-20, 50.73% id in 136 aa; hypothetical protein 10316 2885557 ECA0009 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048141.1 9921 D 218491 CDS YP_048142.1 50118975 2884521 10521..10940 1 NC_004547.2 cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; D-ribose pyranase 10940 rbsD 2884521 rbsD Pectobacterium atrosepticum SCRI1043 D-ribose pyranase YP_048142.1 10521 D 218491 CDS YP_048143.1 50118976 2884518 10948..12453 1 NC_004547.2 with RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; D-ribose transporter ATP-binding protein 12453 rbsA 2884518 rbsA Pectobacterium atrosepticum SCRI1043 D-ribose transporter ATP-binding protein YP_048143.1 10948 D 218491 CDS YP_048144.1 50118977 2884520 12461..13429 1 NC_004547.2 functions to transport ribose at high affinity; forms a complex with RbsA2C2B; ribose ABC transporter permease 13429 rbsC 2884520 rbsC Pectobacterium atrosepticum SCRI1043 ribose ABC transporter permease YP_048144.1 12461 D 218491 CDS YP_048145.1 50118978 2884519 13455..14342 1 NC_004547.2 periplasmic substrate-binding component of the ATP-dependent ribose transport system; D-ribose transporter subunit RbsB 14342 rbsB 2884519 rbsB Pectobacterium atrosepticum SCRI1043 D-ribose transporter subunit RbsB YP_048145.1 13455 D 218491 CDS YP_048146.1 50118979 2884515 14538..15464 1 NC_004547.2 catalyzes the formation of D-ribose 5-phosphate from ribose; ribokinase 15464 rbsK 2884515 rbsK Pectobacterium atrosepticum SCRI1043 ribokinase YP_048146.1 14538 D 218491 CDS YP_048147.1 50118980 2884516 15468..16463 1 NC_004547.2 DNA-binding transcriptional repressor of ribose metabolism; transcriptional repressor RbsR 16463 rbsR 2884516 rbsR Pectobacterium atrosepticum SCRI1043 transcriptional repressor RbsR YP_048147.1 15468 D 218491 CDS YP_048148.1 50118981 2885444 complement(22163..22684) 1 NC_004547.2 in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway; molybdopterin-guanine dinucleotide biosynthesis protein B 22684 mobB 2885444 mobB Pectobacterium atrosepticum SCRI1043 molybdopterin-guanine dinucleotide biosynthesis protein B YP_048148.1 22163 R 218491 CDS YP_048149.1 50118982 2885443 complement(22674..23264) 1 NC_004547.2 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein MobA 23264 mobA 2885443 mobA Pectobacterium atrosepticum SCRI1043 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_048149.1 22674 R 218491 CDS YP_048150.1 50118983 2885558 23466..23735 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum YihD SWALL:Q9RB12 (EMBL:AF146615) (89 aa) fasta scores: E(): 6.6e-33, 98.87% id in 89 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 protein YihD SWALL:YIHD_ECOLI (SWALL:P32126) (89 aa) fasta scores: E(): 1.8e-26, 80.89% id in 89 aa; hypothetical protein 23735 2885558 ECA0018 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048150.1 23466 D 218491 CDS YP_048151.1 50118984 2885524 23805..24800 1 NC_004547.2 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; serine/threonine protein kinase 24800 2885524 ECA0019 Pectobacterium atrosepticum SCRI1043 serine/threonine protein kinase YP_048151.1 23805 D 218491 CDS YP_048152.1 50118985 2882414 24825..25448 1 NC_004547.2 Similar to Erwinia carotovora thiol:disulfide interchange protein DsbA precursor SWALL:DSBA_ERWCA (SWALL:Q9RB10) (207 aa) fasta scores: E(): 1.2e-76, 98.55% id in 207 aa; periplasmic protein disulfide isomerase I 25448 dsbA 2882414 dsbA Pectobacterium atrosepticum SCRI1043 periplasmic protein disulfide isomerase I YP_048152.1 24825 D 218491 CDS YP_048153.1 50118986 2883189 25826..28615 1 NC_004547.2 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 28615 polA 2883189 polA Pectobacterium atrosepticum SCRI1043 DNA polymerase I YP_048153.1 25826 D 218491 CDS YP_048154.1 50118987 2884918 complement(29034..29669) 1 NC_004547.2 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 29669 engB 2884918 engB Pectobacterium atrosepticum SCRI1043 ribosome biogenesis GTP-binding protein YsxC YP_048154.1 29034 R 218491 CDS YP_048155.1 50118988 2885525 29873..30427 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein SWALL:Q8ZJR9 (EMBL:AJ414141) (188 aa) fasta scores: E(): 7.4e-26, 58.96% id in 173 aa, and to Escherichia coli O157:H7 orf, hypothetical protein SWALL:Q8X8G9 (EMBL:AE005617) (168 aa) fasta scores: E(): 2e-12, 53.29% id in 167 aa; hypothetical protein 30427 2885525 ECA0024 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048155.1 29873 D 218491 CDS YP_048156.1 50118989 2882213 30749..32122 1 NC_004547.2 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 32122 hemN 2882213 hemN Pectobacterium atrosepticum SCRI1043 coproporphyrinogen III oxidase YP_048156.1 30749 D 218491 CDS YP_048157.1 50118990 2881769 complement(32447..33859) 1 NC_004547.2 response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes; interacts with sigma-54; nitrogen regulation protein NR(I) 33859 glnG 2881769 glnG Pectobacterium atrosepticum SCRI1043 nitrogen regulation protein NR(I) YP_048157.1 32447 R 218491 CDS YP_048158.1 50118991 2881775 complement(33868..34917) 1 NC_004547.2 sensory histidine kinase in two-component regulatory system with GlnG; acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation; nitrogen regulation protein NR(II) 34917 glnL 2881775 glnL Pectobacterium atrosepticum SCRI1043 nitrogen regulation protein NR(II) YP_048158.1 33868 R 218491 CDS YP_048159.1 50118992 2881761 complement(35258..36667) 1 NC_004547.2 forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; glutamine synthetase 36667 glnA 2881761 glnA Pectobacterium atrosepticum SCRI1043 glutamine synthetase YP_048159.1 35258 R 218491 CDS YP_048160.1 50118993 2884222 37037..38860 1 NC_004547.2 Similar to Escherichia coli GTP-binding protein TypA or BipA or b3871 SWALL:TYPA_ECOLI (SWALL:P32132) (591 aa) fasta scores: E(): 1.1e-189, 90.18% id in 591 aa. Found to be a virulence regulator in an enteropathogenic Escherichia coli (PMID: 9622352).; GTP-binding regulatory protein 38860 typA 2884222 typA Pectobacterium atrosepticum SCRI1043 GTP-binding regulatory protein YP_048160.1 37037 D 218491 CDS YP_048161.1 50118994 2885526 39022..39633 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein SWALL:AAM87347 (EMBL:AJ414141) (196 aa) fasta scores: E(): 4.3e-55, 71.42% id in 196 aa, and to Escherichia coli hypothetical protein YihX SWALL:YIHX_ECOLI (SWALL:P32145) (199 aa) fasta scores: E(): 2.8e-51, 64.61% id in 195 aa; phosphatase 39633 2885526 ECA0031 Pectobacterium atrosepticum SCRI1043 phosphatase YP_048161.1 39022 D 218491 CDS YP_048162.1 50118995 2881855 39698..40135 1 NC_004547.2 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; D-tyrosyl-tRNA(Tyr) deacylase 40135 dtd 2881855 dtd Pectobacterium atrosepticum SCRI1043 D-tyrosyl-tRNA(Tyr) deacylase YP_048162.1 39698 D 218491 CDS YP_048163.1 50118996 2885521 40213..41199 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein YiiD SWALL:YIID_ECOLI (SWALL:P32148) (329 aa) fasta scores: E(): 1.6e-108, 82.31% id in 311 aa, and to Salmonella typhimurium, and Salmonella typhi acetyltransferase YiiD SWALL:Q8XF59 (EMBL:AE008888) (329 aa) fasta scores: E(): 2.7e-107, 81.34% id in 311 aa; GNAT family acetyltransferase 41199 2885521 ECA0033 Pectobacterium atrosepticum SCRI1043 GNAT family acetyltransferase YP_048163.1 40213 D 218491 CDS YP_048164.1 50118997 2885522 complement(41509..43200) 1 NC_004547.2 Similar to Yersinia pestis possible exported protein ypo0033 SWALL:Q8ZJQ9 (EMBL:AJ414141) (569 aa) fasta scores: E(): 1.9e-128, 55.37% id in 558 aa, and to Escherichia coli O6 hypothetical protein YicH SWALL:AAN82916 (EMBL:AE016769) (577 aa) fasta scores: E(): 5.3e-123, 48.92% id in 558 aa; hypothetical protein 43200 2885522 ECA0034 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048164.1 41509 R 218491 CDS YP_048165.1 50118998 2885523 complement(43358..44746) 1 NC_004547.2 Similar to Yersinia pestis membrane permease ypo0034 SWALL:Q8ZJQ8 (EMBL:AJ414141) (461 aa) fasta scores: E(): 1.8e-149, 86.98% id in 461 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 purine permease YicE SWALL:YICE_ECOLI (SWALL:P27432) (463 aa) fasta scores: E(): 3.4e-148, 85.65% id in 460 aa; purine permease 44746 2885523 ECA0035 Pectobacterium atrosepticum SCRI1043 purine permease YP_048165.1 43358 R 218491 CDS YP_048166.1 50118999 2885293 complement(45107..47188) 1 NC_004547.2 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 47188 recG 2885293 recG Pectobacterium atrosepticum SCRI1043 ATP-dependent DNA helicase RecG YP_048166.1 45107 R 218491 CDS YP_048167.1 50119000 2884246 complement(47188..47880) 1 NC_004547.2 specifically modifies tRNA at position G18; tRNA guanosine-2'-O-methyltransferase 47880 trmH 2884246 trmH Pectobacterium atrosepticum SCRI1043 tRNA guanosine-2'-O-methyltransferase YP_048167.1 47188 R 218491 CDS YP_048168.1 50119001 2884368 complement(47886..49985) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri guanosine-3',5'-bis(diphosphate) 3'- pyrophosphohydrolase SpoTor b3650 or z5076 or ecs4525 or sf3690 SWALL:SPOT_ECOLI (SWALL:P17580) (702 aa) fasta scores: E(): 0, 90.74% id in 702 aa; bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 49985 spoT 2884368 spoT Pectobacterium atrosepticum SCRI1043 bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase YP_048168.1 47886 R 218491 CDS YP_048169.1 50119002 2884481 complement(50004..50279) 1 NC_004547.2 promotes RNA polymerase assembly or stability; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 50279 rpoZ 2884481 rpoZ Pectobacterium atrosepticum SCRI1043 DNA-directed RNA polymerase subunit omega YP_048169.1 50004 R 218491 CDS YP_048170.1 50119003 2881491 complement(50333..50956) 1 NC_004547.2 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 50956 gmk 2881491 gmk Pectobacterium atrosepticum SCRI1043 guanylate kinase YP_048170.1 50333 R 218491 CDS YP_048171.1 50119004 2885518 50958..51185 1 NC_004547.2 No significant database matches.; hypothetical protein 51185 2885518 ECA0041 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048171.1 50958 D 218491 CDS YP_048172.1 50119005 2885519 51400..53091 1 NC_004547.2 this ligase is similar to LigA but it lacks the C-terminal BRCT domain; catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+; NAD-dependent DNA ligase LigB 53091 ligB 2885519 ligB Pectobacterium atrosepticum SCRI1043 NAD-dependent DNA ligase LigB YP_048172.1 51400 D 218491 CDS YP_048173.1 50119006 2885520 53350..55035 1 NC_004547.2 catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide; phosphoethanolamine transferase 55035 2885520 ECA0044 Pectobacterium atrosepticum SCRI1043 phosphoethanolamine transferase YP_048173.1 53350 D 218491 CDS YP_048174.1 50119007 2885511 55765..56313 1 NC_004547.2 Similar to Salmonella typhimurium resistance to complement killing Rck or pslt009 SWALL:Q04817 (EMBL:L08613) (185 aa) fasta scores: E(): 7.9e-27, 44.68% id in 188 aa, and to Salmonella typhimurium virulence membrane protein PagC precursor or stm1246 SWALL:PAGC_SALTY (SWALL:P23988) (185 aa) fasta scores: E(): 3.5e-26, 45.05% id in 182 aa; virulence-associated outer membrane protein 56313 2885511 ECA0045 Pectobacterium atrosepticum SCRI1043 virulence-associated outer membrane protein YP_048174.1 55765 D 218491 CDS YP_048175.1 50119008 2885512 complement(56357..57964) 1 NC_004547.2 Similar to Escherichia coli Rtn protein or b2176 SWALL:RTN_ECOLI (SWALL:P76446) (518 aa) fasta scores: E(): 6.1e-42, 30.6% id in 513 aa, and to Salmonella typhi Rtn protein sty0376 SWALL:Q8Z923 (EMBL:AL627266) (524 aa) fasta scores: E(): 1.8e-67, 35.68% id in 524 aa. In E.coli it's found to be involved in resistance to phages N4 and lambda.; signaling membrane protein 57964 2885512 ECA0046 Pectobacterium atrosepticum SCRI1043 signaling membrane protein YP_048175.1 56357 R 218491 CDS YP_048176.1 50119009 2885513 complement(58054..59253) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo3966 SWALL:Q8ZA52 (EMBL:AJ414160) (398 aa) fasta scores: E(): 6.5e-123, 79.74% id in 395 aa, and to Salmonella typhi exported protein sty4215 SWALL:Q8Z267 (EMBL:AL627281) (400 aa) fasta scores: E(): 1.4e-118, 75.94% id in 395 aa; hypothetical protein 59253 2885513 ECA0047 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048176.1 58054 R 218491 CDS YP_048177.1 50119010 2883577 59530..61035 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 low-affinity inorganic phosphate transporter 1 PitA or Pit or b3493 or c4291 or z4893 or ecs4365 SWALL:PITA_ECOLI (SWALL:P37308) (499 aa) fasta scores: E(): 1.3e-136, 70.37% id in 503 aa; low-affinity inorganic phosphate transporter 61035 pitA 2883577 pitA Pectobacterium atrosepticum SCRI1043 low-affinity inorganic phosphate transporter YP_048177.1 59530 D 218491 CDS YP_048178.1 50119011 2882957 complement(61234..61569) 1 NC_004547.2 ppGpp-dependent, membrane associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress; universal stress protein UspB 61569 uspB 2882957 uspB Pectobacterium atrosepticum SCRI1043 universal stress protein UspB YP_048178.1 61234 R 218491 CDS YP_048179.1 50119012 2882963 62108..62545 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri universal stress protein A UspA or b3495 or c4293 or z4895 or ecs4367 or sf3526 SWALL:USPA_ECOLI (SWALL:P28242) (143 aa) fasta scores: E(): 6.7e-47, 94.36% id in 142 aa; universal stress protein A 62545 uspA 2882963 uspA Pectobacterium atrosepticum SCRI1043 universal stress protein A YP_048179.1 62108 D 218491 CDS YP_048180.1 50119013 2881791 62838..64181 1 NC_004547.2 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 64181 gdhA 2881791 gdhA Pectobacterium atrosepticum SCRI1043 glutamate dehydrogenase YP_048180.1 62838 D 218491 CDS YP_048181.1 50119014 2885542 64337..65650 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein Pa4186 SWALL:Q9HWJ5 (EMBL:AE004835) (439 aa) fasta scores: E(): 1.9e-60, 39.58% id in 432 aa; hypothetical protein 65650 2885542 ECA0052 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048181.1 64337 D 218491 CDS YP_048182.1 50119015 2885543 complement(65657..67552) 1 NC_004547.2 Similar to Vibrio cholerae 2`,3`-cyclic-nucleotide 2`-phosphodiesterase, vc2416 SWALL:Q9KPF2 (EMBL:AE004311) (634 aa) fasta scores: E(): 9.2e-161, 66.4% id in 634 aa; phosphodiesterase 67552 2885543 ECA0053 Pectobacterium atrosepticum SCRI1043 phosphodiesterase YP_048182.1 65657 R 218491 CDS YP_048183.1 50119016 2885544 complement(67694..68440) 1 NC_004547.2 predicted SAM-dependent methyltransferase; methyltransferase 68440 2885544 ECA0054 Pectobacterium atrosepticum SCRI1043 methyltransferase YP_048183.1 67694 R 218491 CDS YP_048184.1 50119017 2882449 complement(68437..70479) 1 NC_004547.2 Similar to Escherichia coli oligopeptidase A PrlC or OpdA or b3498 SWALL:OPDA_ECOLI (SWALL:P27298) (680 aa) fasta scores: E(): 0, 85.44% id in 680 aa; oligopeptidase A 70479 prlC 2882449 prlC Pectobacterium atrosepticum SCRI1043 oligopeptidase A YP_048184.1 68437 R 218491 CDS YP_048185.1 50119018 2885545 70800..73349 1 NC_004547.2 Similar to Bordetella avium BhuR SWALL:Q8L1U7 (EMBL:AY095952) (855 aa) fasta scores: E(): 8.3e-14, 23.68% id in 874 aa, and to Pasteurella multocida HemR SWALL:Q9CN63 (EMBL:AE006093) (742 aa) fasta scores: E(): 1.5e-143, 51.04% id in 717 aa; TonB-dependent heme receptor 73349 2885545 ECA0056 Pectobacterium atrosepticum SCRI1043 TonB-dependent heme receptor YP_048185.1 70800 D 218491 CDS YP_048186.1 50119019 2885546 73530..74042 1 NC_004547.2 Similar to Escherichia coli probable RNA polymerase sigma factor FecI or b4293 SWALL:FECI_ECOLI (SWALL:P23484) (173 aa) fasta scores: E(): 2.2e-25, 46.38% id in 166 aa; ECF family RNA polymerase sigma factor 74042 2885546 ECA0057 Pectobacterium atrosepticum SCRI1043 ECF family RNA polymerase sigma factor YP_048186.1 73530 D 218491 CDS YP_048187.1 50119020 2885547 74039..75028 1 NC_004547.2 Similar to Escherichia coli protein FecR or b4292 SWALL:FECR_ECOLI (SWALL:P23485) (317 aa) fasta scores: E(): 3.1e-33, 36.04% id in 319 aa; transmembrane sensor 75028 2885547 ECA0058 Pectobacterium atrosepticum SCRI1043 transmembrane sensor YP_048187.1 74039 D 218491 CDS YP_048188.1 50119021 2885539 75230..76051 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo3918 SWALL:Q8ZA93 (EMBL:AJ414159) (267 aa) fasta scores: E(): 1.7e-17, 34.7% id in 268 aa, and to Shigella flexneri, and Escherichia coli CjrB SWALL:Q933Q6 (EMBL:AF283292) (258 aa) fasta scores: E(): 7.9e-14, 30.59% id in 268 aa, and to Pseudomonas putida TonB SWALL:Q93PQ7 (EMBL:AF315582) (243 aa) fasta scores: E(): 1.5e-10, 31.74% id in 252 aa; TonB-like protein 76051 2885539 ECA0059 Pectobacterium atrosepticum SCRI1043 TonB-like protein YP_048188.1 75230 D 218491 CDS YP_048189.1 50119022 2885540 complement(76062..76355) 1 NC_004547.2 Similar to Shigella flexneri conserved hypothetical protein YghW SWALL:AAN44523 (EMBL:AE015317) (95 aa) fasta scores: E(): 3.8e-17, 47.25% id in 91 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein YghW SWALL:AAN82179 (EMBL:U28377) (95 aa) fasta scores: E(): 3.8e-17, 47.25% id in 91 aa; hypothetical protein 76355 2885540 ECA0060 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048189.1 76062 R 218491 CDS YP_048190.1 50119023 2885541 76671..77513 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3976 SWALL:Q8ZA44 (EMBL:AJ414160) (280 aa) fasta scores: E(): 4.8e-91, 80.35% id in 280 aa, and to Escherichia coli hypothetical protein YhiR SWALL:YHIR_ECOLI (SWALL:P37634) (280 aa) fasta scores: E(): 3.2e-88, 77.85% id in 280 aa; hypothetical protein 77513 2885541 ECA0061 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048190.1 76671 D 218491 CDS YP_048191.1 50119024 2885364 77642..78994 1 NC_004547.2 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; glutathione reductase 78994 gor 2885364 gor Pectobacterium atrosepticum SCRI1043 glutathione reductase YP_048191.1 77642 D 218491 CDS YP_048192.1 50119025 2885505 complement(79098..79385) 1 NC_004547.2 Similar to Escherichia coli Orf43 protein SWALL:Q9S123 (EMBL:AB024946) (95 aa) fasta scores: E(): 8.3e-33, 89.47% id in 95 aa; hypothetical protein 79385 2885505 ECA0063 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048192.1 79098 R 218491 CDS YP_048193.1 50119026 2885506 complement(79382..79633) 1 NC_004547.2 Similar to Escherichia coli incf plasmid repfib replicon SWALL:Q60256 (EMBL:M26308) (83 aa) fasta scores: E(): 6.4e-27, 87.95% id in 83 aa, and to Escherichia coli Orf44 protein SWALL:Q9S122 (EMBL:AB024946) (83 aa) fasta scores: E(): 8.8e-27, 87.95% id in 83 aa; hypothetical protein 79633 2885506 ECA0064 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048193.1 79382 R 218491 CDS YP_048194.1 50119027 2885507 79889..80794 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein Pa2033 SWALL:Q9I282 (EMBL:AE004629) (302 aa) fasta scores: E(): 7.3e-48, 46.8% id in 297 aa, and to Corynebacterium glutamicum siderophore-interacting protein cgl0665 SWALL:Q8NSK6 (EMBL:AP005276) (299 aa) fasta scores: E(): 1.9e-29, 37.32% id in 292 aa, and to Escherichia coli hypothetical protein YqjH SWALL:YQJH_ECOLI (SWALL:Q46871) (254 aa) fasta scores: E(): 0.0064, 28.05% id in 303 aa; hypothetical protein 80794 2885507 ECA0065 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048194.1 79889 D 218491 CDS YP_048195.1 50119028 2885422 complement(80829..81584) 1 NC_004547.2 Involved in disulfide bond formation; disulfide isomerase/thiol-disulfide oxidase 81584 dsbG 2885422 dsbG Pectobacterium atrosepticum SCRI1043 disulfide isomerase/thiol-disulfide oxidase YP_048195.1 80829 R 218491 CDS YP_048196.1 50119029 2882819 81805..82428 1 NC_004547.2 Similar to Caulobacter crescentus efflux protein, LysE family cc0456 SWALL:Q9AAY6 (EMBL:AE005719) (208 aa) fasta scores: E(): 1.4e-42, 56.25% id in 208 aa; amino acid transporter LysE 82428 2882819 ECA0067 Pectobacterium atrosepticum SCRI1043 amino acid transporter LysE YP_048196.1 81805 D 218491 CDS YP_048197.1 50119030 2882820 complement(82475..83347) 1 NC_004547.2 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3225 SWALL:Q9HZ15 (EMBL:AE004745) (309 aa) fasta scores: E(): 1.4e-30, 38.11% id in 286 aa, and to Escherichia coli hypothetical transcriptional regulator YeeY SWALL:YEEY_ECOLI (SWALL:P76369) (309 aa) fasta scores: E(): 7.8e-10, 28.34% id in 247 aa; LysR family transcriptional regulator 83347 2882820 ECA0068 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_048197.1 82475 R 218491 CDS YP_048198.1 50119031 2881519 83450..83959 1 NC_004547.2 Similar to Bacillus subtilis phenolic acid decarboxylase PadC or Pad SWALL:PADC_BACSU (SWALL:O07006) (161 aa) fasta scores: E(): 5.6e-33, 53.16% id in 158 aa, and to Vibrio cholerae probable phenolic acid decarboxylase PadC or vc2240 SWALL:PADC_VIBCH (SWALL:Q9KPX2) (174 aa) fasta scores: E(): 3.2e-46, 63.41% id in 164 aa; phenolic acid decarboxylase 83959 padC 2881519 padC Pectobacterium atrosepticum SCRI1043 phenolic acid decarboxylase YP_048198.1 83450 D 218491 CDS YP_048199.1 50119032 2882821 complement(84016..85152) 1 NC_004547.2 Similar to Corynebacterium glutamicum hypothetical protein Cgl2435 SWALL:Q8NMX8 (EMBL:AP005281) (411 aa) fasta scores: E(): 1e-33, 40.97% id in 288 aa, and to Corynebacterium efficiens conserved hypothetical protein ce2330 SWALL:BAC19140 (EMBL:AP005222) (414 aa) fasta scores: E(): 1.4e-33, 33.97% id in 418 aa; hypothetical protein 85152 2882821 ECA0070 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048199.1 84016 R 218491 CDS YP_048200.1 50119033 2882792 complement(85149..86183) 1 NC_004547.2 Similar to Bradyrhizobium japonicum Bll6902 protein SWALL:BAC52167 (EMBL:AP005960) (378 aa) fasta scores: E(): 3.4e-73, 58.99% id in 339 aa, and to Bradyrhizobium japonicum LuxA-like protein bll7033 SWALL:BAC52298 (EMBL:AP005960) (408 aa) fasta scores: E(): 3.7e-14, 28.77% id in 358 aa; monooxygenase 86183 2882792 ECA0071 Pectobacterium atrosepticum SCRI1043 monooxygenase YP_048200.1 85149 R 218491 CDS YP_048201.1 50119034 2882793 complement(86185..87882) 1 NC_004547.2 Similar to Corynebacterium glutamicum ABC-type transporter, duplicated ATPase component cgl2436 SWALL:Q8NMX7 (EMBL:AP005281) (547 aa) fasta scores: E(): 8.2e-93, 54.2% id in 535 aa, and to Escherichia coli hypothetical ABC transporter ATP-binding protein YejF SWALL:YEJF_ECOLI (SWALL:P33916) (529 aa) fasta scores: E(): 4.8e-65, 42.8% id in 528 aa; ABC transporter ATP-binding protein 87882 2882793 ECA0072 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_048201.1 86185 R 218491 CDS YP_048202.1 50119035 2882794 complement(87879..88739) 1 NC_004547.2 Similar to Corynebacterium efficiens transport protein ce2332 SWALL:BAC19142 (EMBL:AP005222) (305 aa) fasta scores: E(): 2.3e-58, 62.22% id in 270 aa, and to Escherichia coli hypothetical ABC transporter permease protein YliD SWALL:YLID_ECOLI (SWALL:P75799) (303 aa) fasta scores: E(): 1.3e-33, 38.34% id in 266 aa; ABC transporter permease 88739 2882794 ECA0073 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_048202.1 87879 R 218491 CDS YP_048203.1 50119036 2882862 complement(88736..89680) 1 NC_004547.2 Similar to Corynebacterium glutamicum ABC-type transporter, permease component cgl2438 SWALL:Q8NMX5 (EMBL:AP005281) (313 aa) fasta scores: E(): 3.9e-60, 55.15% id in 301 aa, and to Salmonella typhi hypothetical ABC transporter permease protein YliC SWALL:Q8Z862 (EMBL:AL627268) (306 aa) fasta scores: E(): 6.1e-30, 36.03% id in 308 aa; ABC transporter permease 89680 2882862 ECA0074 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_048203.1 88736 R 218491 CDS YP_048204.1 50119037 2882863 complement(89707..91344) 1 NC_004547.2 Similar to Corynebacterium glutamicum ABC-type transporter, periplasmic component cgl2439 SWALL:Q8NMX4 (EMBL:AP005281) (569 aa) fasta scores: E(): 1.1e-87, 47.85% id in 535 aa, and to Corynebacterium efficiens peptide binding protein ce2334 SWALL:BAC19144 (EMBL:AP005222) (615 aa) fasta scores: E(): 1.6e-86, 47.29% id in 535 aa; ABC transporter substrate binding protein 91344 2882863 ECA0075 Pectobacterium atrosepticum SCRI1043 ABC transporter substrate binding protein YP_048204.1 89707 R 218491 CDS YP_048205.1 50119038 2882864 91666..92868 1 NC_004547.2 Similar to Pyrococcus abyssi related beta-lactamase precursor Pbp SWALL:Q9V2D6 (EMBL:AJ248283) (447 aa) fasta scores: E(): 2.5e-14, 22.94% id in 340 aa, and to Bacillus cereus alkaline D-peptidase adP SWALL:P94288 (EMBL:D86380) (388 aa) fasta scores: E(): 1.7e-10, 29.52% id in 254 aa; hypothetical protein 92868 2882864 ECA0077 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048205.1 91666 D 218491 CDS YP_048206.2 161501886 2884280 complement(92960..93922) 1 NC_004547.2 Involved in the metabolism of aromatic amino acids; 2-hydroxyacid dehydrogenase 93922 tkrA 2884280 tkrA Pectobacterium atrosepticum SCRI1043 2-hydroxyacid dehydrogenase YP_048206.2 92960 R 218491 CDS YP_048207.1 50119040 2885481 complement(93967..94173) 1 NC_004547.2 No significant database matches. Possible false CDS.; hypothetical protein 94173 2885481 ECA0079 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048207.1 93967 R 218491 CDS YP_048208.1 50119041 2885482 94276..96228 1 NC_004547.2 Similar to Yersinia pestis methyl-accepting chemotaxis protein II Tar or Tsr SWALL:AAM87624 (EMBL:AJ414160) (649 aa) fasta scores: E(): 4e-72, 42.03% id in 659 aa, and to Escherichia coli methyl-accepting chemotaxis protein I Tsr SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 1.2e-55, 51.04% id in 384 aa; methyl-accepting chemotaxis protein 96228 2885482 ECA0080 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_048208.1 94276 D 218491 CDS YP_048209.1 50119042 2885483 complement(96284..96727) 1 NC_004547.2 Similar to Yersinia pestis acetyltransferase ypo4075 SWALL:Q8Z9W4 (EMBL:AJ414160) (151 aa) fasta scores: E(): 1.8e-28, 51.37% id in 146 aa, and to Escherichia coli hypothetical acetyltransferase YiaC SWALL:YIAC_ECOLI (SWALL:P37664) (146 aa) fasta scores: E(): 2.2e-22, 45% id in 140 aa; hypothetical protein 96727 2885483 ECA0081 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048209.1 96284 R 218491 CDS YP_048210.1 50119043 2884324 complement(96724..97287) 1 NC_004547.2 Similar to Escherichia coli DNA-3-methyladenine glycosylase I Tag or b3549 SWALL:3MG1_ECOLI (SWALL:P05100) (187 aa) fasta scores: E(): 3.8e-53, 69.23% id in 182 aa; DNA-3-methyladenine glycosylase I 97287 tag 2884324 tag Pectobacterium atrosepticum SCRI1043 DNA-3-methyladenine glycosylase I YP_048210.1 96724 R 218491 CDS YP_048211.1 50119044 2885484 97589..98332 1 NC_004547.2 Similar to Pseudomonas putida conserved hypothetical protein pp5143 SWALL:AAN70708 (EMBL:AE016793) (260 aa) fasta scores: E(): 1e-36, 48.3% id in 236 aa; hypothetical protein 98332 2885484 ECA0083 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048211.1 97589 D 218491 CDS YP_048212.1 50119045 2881489 98527..99441 1 NC_004547.2 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 99441 glyQ 2881489 glyQ Pectobacterium atrosepticum SCRI1043 glycyl-tRNA synthetase subunit alpha YP_048212.1 98527 D 218491 CDS YP_048213.1 50119046 2881490 99451..101520 1 NC_004547.2 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 101520 glyS 2881490 glyS Pectobacterium atrosepticum SCRI1043 glycyl-tRNA synthetase subunit beta YP_048213.1 99451 D 218491 CDS YP_048214.1 50119047 2885485 101812..102516 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo4070 SWALL:Q8Z9W8 (EMBL:AJ414160) (241 aa) fasta scores: E(): 1.3e-39, 49.11% id in 226 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein YiaF SWALL:AAN45039 (EMBL:U00039) (276 aa) fasta scores: E(): 2.7e-33, 44.09% id in 220 aa; hypothetical protein 102516 2885485 ECA0086 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048214.1 101812 D 218491 CDS YP_048215.1 50119048 2881212 102940..104847 1 NC_004547.2 Similar to Escherichia coli PTS system, mannitol-specific IIabc component MtlA or b3599 SWALL:PTMA_ECOLI (SWALL:P00550) (637 aa) fasta scores: E(): 1.1e-188, 81.63% id in 637 aa; PTS system mannitol-specific transporter subunit IIABC 104847 mtlA 2881212 mtlA Pectobacterium atrosepticum SCRI1043 PTS system mannitol-specific transporter subunit IIABC YP_048215.1 102940 D 218491 CDS YP_048216.1 50119049 2881213 104909..106057 1 NC_004547.2 Similar to Escherichia coli mannitol-1-phosphate 5-dehydrogenase MtlD or b3600 SWALL:MTLD_ECOLI (SWALL:P09424) (382 aa) fasta scores: E(): 5.7e-108, 77.48% id in 382 aa; mannitol-1-phosphate 5-dehydrogenase 106057 mtlD 2881213 mtlD Pectobacterium atrosepticum SCRI1043 mannitol-1-phosphate 5-dehydrogenase YP_048216.1 104909 D 218491 CDS YP_048217.1 50119050 2881744 106133..106735 1 NC_004547.2 Acts as a repressor of the mtlAD operon; mannitol repressor protein 106735 mtlR 2881744 mtlR Pectobacterium atrosepticum SCRI1043 mannitol repressor protein YP_048217.1 106133 D 218491 CDS YP_048218.1 50119051 2885486 106894..107256 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo4065 SWALL:AAM87627 (EMBL:AJ414160) (118 aa) fasta scores: E(): 6.1e-24, 67.52% id in 117 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein YibL SWALL:YIBL_ECOLI (SWALL:P36564) (120 aa) fasta scores: E(): 2.8e-21, 63.63% id in 121 aa; hypothetical protein 107256 2885486 ECA0090 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048218.1 106894 D 218491 CDS YP_048219.1 50119052 2882245 complement(107366..109258) 1 NC_004547.2 Similar to Yersinia pestis methyl-accepting chemotaxis protein II Tar or Tsr SWALL:AAM87624 (EMBL:AJ414160) (649 aa) fasta scores: E(): 2.3e-112, 57.98% id in 626 aa, and to Escherichia coli methyl-accepting chemotaxis protein III Trg SWALL:MCP3_ECOLI (SWALL:P05704) (546 aa) fasta scores: E(): 5.9e-56, 55.47% id in 393 aa; methyl-accepting chemotaxis protein 109258 2882245 ECA0091 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_048219.1 107366 R 218491 CDS YP_048220.1 50119053 2884373 complement(109636..110262) 1 NC_004547.2 SodA; manganese binding; only present under aerobic conditions; destroys free radicals; superoxide dismutase 110262 sodA 2884373 sodA Pectobacterium atrosepticum SCRI1043 superoxide dismutase YP_048220.1 109636 R 218491 CDS YP_048221.1 50119054 2883035 complement(110522..111355) 1 NC_004547.2 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 111355 fdhD 2883035 fdhD Pectobacterium atrosepticum SCRI1043 formate dehydrogenase accessory protein YP_048221.1 110522 R 218491 CDS YP_048222.1 50119055 2884193 111626..113161 1 NC_004547.2 Similar to Escherichia coli aldehyde dehydrogenase B AldB or b3588 SWALL:ALDB_ECOLI (SWALL:P37685) (512 aa) fasta scores: E(): 1.4e-172, 83.2% id in 500 aa; aldehyde dehydrogenase 113161 aldB 2884193 aldB Pectobacterium atrosepticum SCRI1043 aldehyde dehydrogenase YP_048222.1 111626 D 218491 CDS YP_048223.1 50119056 2882246 113351..114343 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo4045 SWALL:Q8Z9Y6 (EMBL:AJ414160) (330 aa) fasta scores: E(): 6.6e-88, 65.16% id in 333 aa, and to Escherichia coli hypothetical protein YiaH SWALL:YIAH_ECOLI (SWALL:P37669) (331 aa) fasta scores: E(): 5.3e-74, 56.49% id in 331 aa; hypothetical protein 114343 2882246 ECA0095 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048223.1 113351 D 218491 CDS YP_048224.1 50119057 2882642 complement(114374..115831) 1 NC_004547.2 Similar to Escherichia coli xylulose kinase XylB SWALL:XYLB_ECOLI (SWALL:P09099) (484 aa) fasta scores: E(): 7.7e-141, 73.81% id in 485 aa; xylulose kinase 115831 xylB 2882642 xylB Pectobacterium atrosepticum SCRI1043 xylulose kinase YP_048224.1 114374 R 218491 CDS YP_048225.1 50119058 2882641 complement(115898..117217) 1 NC_004547.2 catalyzes the interconversion of D-xylose to D-xylulose; xylose isomerase 117217 xylA 2882641 xylA Pectobacterium atrosepticum SCRI1043 xylose isomerase YP_048225.1 115898 R 218491 CDS YP_048226.1 50119059 2882643 117691..118689 1 NC_004547.2 periplasmic substrate-binding component of the ATP-dependent xylose transport system; high affinity; D-xylose transporter subunit XylF 118689 xylF 2882643 xylF Pectobacterium atrosepticum SCRI1043 D-xylose transporter subunit XylF YP_048226.1 117691 D 218491 CDS YP_048227.1 50119060 2882637 118825..120366 1 NC_004547.2 with XylFH is part of the high affinity xylose ABC transporter; xylose transporter ATP-binding subunit 120366 xylG 2882637 xylG Pectobacterium atrosepticum SCRI1043 xylose transporter ATP-binding subunit YP_048227.1 118825 D 218491 CDS YP_048228.1 50119061 2882638 120344..121525 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri xylose transport system permease protein XylH SWALL:XYLH_ECOLI (SWALL:P37389) (393 aa) fasta scores: E(): 3.6e-116, 82.39% id in 392 aa; xylose transport system permease 121525 xylH 2882638 xylH Pectobacterium atrosepticum SCRI1043 xylose transport system permease YP_048228.1 120344 D 218491 CDS YP_048229.1 50119062 2882639 121662..122840 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 xylose operon regulatory protein XylR SWALL:XYLR_ECOLI (SWALL:P37390) (392 aa) fasta scores: E(): 2.5e-127, 81.02% id in 390 aa; xylose operon regulatory protein 122840 xylR 2882639 xylR Pectobacterium atrosepticum SCRI1043 xylose operon regulatory protein YP_048229.1 121662 D 218491 CDS YP_048230.1 50119063 2882247 complement(122910..123485) 1 NC_004547.2 Similar to Salmonella typhimurium intracellular protease/amidase AraH or stm1931 SWALL:Q8ZNU7 (EMBL:AE008786) (185 aa) fasta scores: E(): 1.4e-44, 64.86% id in 185 aa, and to Yersinia pestis Thij/Pfpi-family thiamine biogenesis protein ypo0845 SWALL:Q8ZHP5 (EMBL:AJ414145) (192 aa) fasta scores: E(): 1.8e-29, 47.59% id in 187 aa; hypothetical protein 123485 2882247 ECA0102 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048230.1 122910 R 218491 CDS YP_048231.1 50119064 2882248 complement(123731..123943) 1 NC_004547.2 No significant database matches. Possible false CDS.; hypothetical protein 123943 2882248 ECA0103 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048231.1 123731 R 218491 CDS YP_048232.1 50119065 2884142 124086..125432 1 NC_004547.2 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; argininosuccinate synthase 125432 argG 2884142 argG Pectobacterium atrosepticum SCRI1043 argininosuccinate synthase YP_048232.1 124086 D 218491 CDS YP_048233.1 50119066 2884752 125689..126339 1 NC_004547.2 Similar to Erwinia carotovora autoinducer synthesis protein CarI or HslI SWALL:CARI_ERWCA (SWALL:P33880) (216 aa) fasta scores: E(): 1.1e-85, 97.22% id in 216 aa, and to Erwinia carotovora autoinducer synthesis protein ExpI SWALL:EXPI_ERWCA (SWALL:P33882) (217 aa) fasta scores: E(): 9.2e-65, 72.94% id in 207 aa, and to Erwinia chrysanthemi AhlI SWALL:Q8KUJ8 (EMBL:AF448800) (212 aa) fasta scores: E(): 6.5e-54, 62.26% id in 212 aa; N-acylhomoserine lactone synthase 126339 expI 2884752 expI Pectobacterium atrosepticum SCRI1043 N-acylhomoserine lactone synthase YP_048233.1 125689 D 218491 CDS YP_048234.1 50119067 2884091 complement(126323..127051) 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. betavasculorum LuxR homolog EcbR SWALL:O30346 (EMBL:AF001050) (242 aa) fasta scores: E(): 3.8e-85, 93.38% id in 242 aa, and to Erwinia chrysanthemi transcriptional activator protein EchR SWALL:ECHR_ERWCH (SWALL:Q46967) (250 aa) fasta scores: E(): 3.6e-54, 58.61% id in 244 aa, and to Erwinia carotovora transcriptional activator protein ExpR SWALL:EXPR_ERWCA (SWALL:Q47189) (245 aa) fasta scores: E(): 1.5e-56, 61.57% id in 244 aa. Also similar to ECA1561 (67.839%% in 199 aa overlap); quorum-sensing transcriptional regulator 127051 expR 2884091 expR Pectobacterium atrosepticum SCRI1043 quorum-sensing transcriptional regulator YP_048234.1 126323 R 218491 CDS YP_048235.1 50119068 2883302 complement(127317..128513) 1 NC_004547.2 Similar to Erwinia chrysanthemi pectinesterase B precursor PemB SWALL:PMEB_ERWCH (SWALL:Q47474) (433 aa) fasta scores: E(): 8.6e-100, 65.48% id in 394 aa, and to Erwinia carotovora pectinesterase b pemB SWALL:PMEB_ERWCA (SWALL:P55743) (178 aa) fasta scores: E(): 7.6e-61, 91.47% id in 176 aa; pectin methylesterase 128513 pmeB 2883302 pmeB Pectobacterium atrosepticum SCRI1043 pectin methylesterase YP_048235.1 127317 R 218491 CDS YP_048236.2 161501885 2882249 complement(128542..128883) 1 NC_004547.2 Similar to Shigella flexneri conserved hypothetical protein YdgC SWALL:AAN43211 (EMBL:AE015184) (111 aa) fasta scores: E(): 9.5e-27, 65.42% id in 107 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YdgC SWALL:YDGC_ECOLI (SWALL:P52110) (111 aa) fasta scores: E(): 9.5e-27, 65.42% id in 107 aa; hypothetical protein 128883 2882249 ECA0108 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048236.2 128542 R 218491 CDS YP_048237.1 50119070 2882250 129082..130098 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c1689 SWALL:AAN80156 (EMBL:AE016760) (347 aa) fasta scores: E(): 6e-85, 68.73% id in 323 aa, and to Yersinia pestis hypothetical y2334 SWALL:AAM85893 (EMBL:AE013835) (179 aa) fasta scores: E(): 2.2e-47, 73.83% id in 172 aa; hypothetical protein 130098 2882250 ECA0109 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048237.1 129082 D 218491 CDS YP_048238.1 50119071 2882383 130095..131123 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein SWALL:AAM85892 (EMBL:AL031866) (338 aa) fasta scores: E(): 1.2e-77, 59.64% id in 342 aa, and to Escherichia coli O6 hypothetical protein YbjS SWALL:AAN80157 (EMBL:AE016760) (338 aa) fasta scores: E(): 9.2e-76, 58.43% id in 332 aa, and to Yersinia pestis nucleotide di-p-sugar epimerase or dehydratase y2825 SWALL:AAM86376 (EMBL:AE013886) (341 aa) fasta scores: E(): 8.4e-58, 48.19% id in 332 aa; hypothetical protein 131123 2882383 ECA0110 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048238.1 130095 D 218491 CDS YP_048239.1 50119072 2882384 131116..131922 1 NC_004547.2 Similar to Escherichia coli O6 GumP homolog c1691 SWALL:AAN80158 (EMBL:AE016760) (268 aa) fasta scores: E(): 3.6e-70, 63.43% id in 268 aa, and to Yersinia pestis hypothetical y2332 SWALL:AAM85891 (EMBL:AE013835) (283 aa) fasta scores: E(): 2.2e-69, 62.68% id in 268 aa, and to Xanthomonas axonopodis GumP protein SWALL:Q8PJG2 (EMBL:AE011897) (282 aa) fasta scores: E(): 8.9e-25, 35.71% id in 266 aa; hypothetical protein 131922 2882384 ECA0111 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048239.1 131116 D 218491 CDS YP_048240.1 50119073 2882385 131919..133205 1 NC_004547.2 Similar to Yersinia pestis coenzyme synthetase ypo1981 SWALL:Q8ZF14 (EMBL:AJ414150) (428 aa) fasta scores: E(): 3.7e-117, 67.37% id in 423 aa, and to Escherichia coli O6 hypothetical protein c1692 SWALL:AAN80159 (EMBL:AE016760) (428 aa) fasta scores: E(): 1.3e-111, 65.48% id in 423 aa; hypothetical protein 133205 2882385 ECA0112 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048240.1 131919 D 218491 CDS YP_048241.1 50119074 2882311 133202..133855 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c1693 SWALL:AAN80160 (EMBL:AE016760) (204 aa) fasta scores: E(): 5.5e-40, 58.69% id in 184 aa, and to Ralstonia solanacearum probable transmembrane protein rsp0404 SWALL:Q8XSR3 (EMBL:AL646078) (220 aa) fasta scores: E(): 9.5e-09, 31.25% id in 208 aa; hypothetical protein 133855 2882311 ECA0113 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048241.1 133202 D 218491 CDS YP_048242.1 50119075 2882312 133860..134975 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c1694 SWALL:AAN80161 (EMBL:AE016760) (374 aa) fasta scores: E(): 9.6e-86, 56.09% id in 369 aa; hypothetical protein 134975 2882312 ECA0114 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048242.1 133860 D 218491 CDS YP_048243.1 50119076 2882313 134972..136117 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c1695 SWALL:AAN80162 (EMBL:AE016760) (363 aa) fasta scores: E(): 7.8e-66, 45.87% id in 364 aa, and to Synechocystis sp. linoleoyl-coA desaturase des6 or sll0262 SWALL:LLCD_SYNY3 (SWALL:Q08871) (359 aa) fasta scores: E(): 1.5e-18, 28.49% id in 365 aa; fatty acid desaturase 136117 2882313 ECA0115 Pectobacterium atrosepticum SCRI1043 fatty acid desaturase YP_048243.1 134972 D 218491 CDS YP_048244.1 50119077 2882348 136117..137208 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c1695 SWALL:AAN80162 (EMBL:AE016760) (363 aa) fasta scores: E(): 4.1e-77, 54.33% id in 346 aa, and to Synechocystis sp. linoleoyl-coA desaturase des6 or sll0262 SWALL:LLCD_SYNY3 (SWALL:Q08871) (359 aa) fasta scores: E(): 1.3e-20, 28.57% id in 364 aa; fatty acid desaturase 137208 2882348 ECA0116 Pectobacterium atrosepticum SCRI1043 fatty acid desaturase YP_048244.1 136117 D 218491 CDS YP_048245.1 50119078 2882349 137275..138204 1 NC_004547.2 Similar to Xanthomonas axonopodis hypothetical protein Xac2610 SWALL:Q8PJC5 (EMBL:AE011901) (267 aa) fasta scores: E(): 6.7e-11, 30.18% id in 159 aa, and to Yersinia pestis exported protein ypo0702 or y3476 SWALL:AAM87024 (EMBL:AJ414144) (331 aa) fasta scores: E(): 0.00098, 27.43% id in 113 aa; hypothetical protein 138204 2882349 ECA0117 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048245.1 137275 D 218491 CDS YP_048246.1 50119079 2882966 138613..140052 1 NC_004547.2 NAD-linked; aldehyde dehydrogenase 140052 aldA 2882966 aldA Pectobacterium atrosepticum SCRI1043 aldehyde dehydrogenase YP_048246.1 138613 D 218491 CDS YP_048247.1 50119080 2883630 140268..141428 1 NC_004547.2 flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; L-lactate dehydrogenase 141428 lldD 2883630 lldD Pectobacterium atrosepticum SCRI1043 L-lactate dehydrogenase YP_048247.1 140268 D 218491 CDS YP_048248.1 50119081 2882350 141449..142765 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein Pa2651 SWALL:Q9I0I7 (EMBL:AE004694) (352 aa) fasta scores: E(): 9e-64, 51.32% id in 339 aa, and to Brucella suis membrane protein, bra0460 SWALL:AAN33654 (EMBL:AE014544) (352 aa) fasta scores: E(): 1.5e-54, 44.5% id in 346 aa; hypothetical protein 142765 2882350 ECA0120 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048248.1 141449 D 218491 CDS YP_048249.1 50119082 2882251 complement(142830..143192) 1 NC_004547.2 Similar to Pasteurella multocida hypothetical protein Pm1636 SWALL:Q9CKI1 (EMBL:AE006200) (121 aa) fasta scores: E(): 1.9e-09, 30.7% id in 114 aa, and to Xylella fastidiosa hypothetical protein Xf2198 SWALL:Q9PBE6 (EMBL:AE004033) (133 aa) fasta scores: E(): 1.4e-05, 36.14% id in 83 aa; hypothetical protein 143192 2882251 ECA0121 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048249.1 142830 R 218491 CDS YP_048250.1 50119083 2882252 complement(143224..143610) 1 NC_004547.2 No significant database matches.; hypothetical protein 143610 2882252 ECA0122 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048250.1 143224 R 218491 CDS YP_048251.1 50119084 2882253 143719..144270 1 NC_004547.2 No significant database matches.; lipoprotein 144270 2882253 ECA0123 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_048251.1 143719 D 218491 CDS YP_048252.1 50119085 2882411 complement(144322..144879) 1 NC_004547.2 No significant database matches.; lipoprotein 144879 2882411 ECA0124 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_048252.1 144322 R 218491 CDS YP_048253.1 50119086 2882412 complement(144970..145197) 1 NC_004547.2 Similar to Anabaena sp. hypothetical protein Asr3468 asr3468 SWALL:Q8YRH9 (EMBL:AP003593) (83 aa) fasta scores: E(): 0.99, 34.28% id in 70 aa; hypothetical protein 145197 2882412 ECA0125 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048253.1 144970 R 218491 CDS YP_048254.1 50119087 2882413 145496..145804 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c5295 SWALL:AAN83716 (EMBL:AE016771) (163 aa) fasta scores: E(): 3.3e-09, 43.82% id in 89 aa; hypothetical protein 145804 2882413 ECA0126 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048254.1 145496 D 218491 CDS YP_048255.1 50119088 2882386 145801..147051 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c5297 SWALL:AAN83718 (EMBL:AE016771) (203 aa) fasta scores: E(): 3.7e-34, 50.25% id in 199 aa, and to Erwinia amylovora hypothetical 47.8 kDa protein SWALL:Q9F814 (EMBL:AF264948) (427 aa) fasta scores: E(): 8.3e-14, 27.5% id in 429 aa; hypothetical protein 147051 2882386 ECA0127 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048255.1 145801 D 218491 CDS YP_048256.1 50119089 2882387 complement(147194..147496) 1 NC_004547.2 No significant database matches.; hypothetical protein 147496 2882387 ECA0128 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048256.1 147194 R 218491 CDS YP_048257.1 50119090 2882388 complement(148811..150391) 1 NC_004547.2 Similar to Vibrio cholerae deoxycytidylate deaminase-related protein vc0175 SWALL:Q9KVH1 (EMBL:AE004108) (532 aa) fasta scores: E(): 1.2e-25, 37.32% id in 509 aa, and to Listeria monocytogenes competence protein SWALL:Q8RT79 (EMBL:AF468456) (176 aa) fasta scores: E(): 7.7e-05, 41.42% id in 70 aa; deoxycytidylate deaminase 150391 2882388 ECA0129 Pectobacterium atrosepticum SCRI1043 deoxycytidylate deaminase YP_048257.1 148811 R 218491 CDS YP_048258.1 50119091 2882374 complement(150683..151546) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo0043 SWALL:AAM83692 (EMBL:AJ414141) (287 aa) fasta scores: E(): 5.3e-83, 86.76% id in 287 aa, and to Escherichia coli protein YicC SWALL:YICC_ECOLI (SWALL:P23839) (287 aa) fasta scores: E(): 8e-82, 85.01% id in 287 aa; hypothetical protein 151546 2882374 ECA0130 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048258.1 150683 R 218491 CDS YP_048259.1 50119092 2882375 complement(151645..152553) 1 NC_004547.2 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa5085 SWALL:Q9HU98 (EMBL:AE004921) (318 aa) fasta scores: E(): 9.5e-27, 36.15% id in 307 aa, and to Salmonella typhimurium, and Salmonella typhi positive transcriptional regulator LysR SWALL:Q8XGD5 (EMBL:AE008838) (311 aa) fasta scores: E(): 1.8e-15, 26.66% id in 300 aa, and to Escherichia coli transcriptional activator protein LysR SWALL:LYSR_ECOLI (SWALL:P03030) (311 aa) fasta scores: E(): 3.2e-13, 27.79% id in 277 aa; LysR family transcriptional regulator 152553 2882375 ECA0131 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_048259.1 151645 R 218491 CDS YP_048260.1 50119093 2882376 complement(152758..153705) 1 NC_004547.2 Similar to Arabidopsis thaliana L-asparaginase at5g08100 or t22d6_40 SWALL:ASPG_ARATH (SWALL:P50287) (315 aa) fasta scores: E(): 7.9e-38, 44.22% id in 303 aa, and to Escherichia coli L-asparaginase precursor ybik or b0828 SWALL:ASGX_ECOLI (SWALL:P37595) (321 aa) fasta scores: E(): 3.2e-73, 65.39% id in 315 aa; L-asparaginase 153705 2882376 ECA0132 Pectobacterium atrosepticum SCRI1043 L-asparaginase YP_048260.1 152758 R 218491 CDS YP_048261.1 50119094 2885397 complement(153765..154586) 1 NC_004547.2 Similar to Ralstonia solanacearum hypothetical protein rsc1384 SWALL:Q8XZL1 (EMBL:AL646064) (271 aa) fasta scores: E(): 4.5e-37, 43.49% id in 269 aa, and to Bacillus subtilis dipeptide transport protein DppA or DciaA SWALL:DPPA_BACSU (SWALL:P26902) (274 aa) fasta scores: E(): 9.7e-19, 32.84% id in 274 aa; hypothetical protein 154586 2885397 ECA0133 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048261.1 153765 R 218491 CDS YP_048262.1 50119095 2885398 complement(154589..155671) 1 NC_004547.2 Similar to Rhizobium loti probable D-aminopeptidase mlr2477 SWALL:Q98IB6 (EMBL:AP002999) (343 aa) fasta scores: E(): 8.8e-55, 52.74% id in 328 aa; peptidase 155671 2885398 ECA0134 Pectobacterium atrosepticum SCRI1043 peptidase YP_048262.1 154589 R 218491 CDS YP_048263.1 50119096 2885399 complement(155680..156579) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 dipeptide transport system permease protein DppC or b3542 or c4357 or z4959 or ecs4422 SWALL:DPPC_ECOLI (SWALL:P37315) (300 aa) fasta scores: E(): 5.1e-44, 45.26% id in 285 aa, and to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc1382 or rs04665 SWALL:Q8XZL3 (EMBL:AL646064) (299 aa) fasta scores: E(): 3.3e-62, 57.71% id in 298 aa; ABC transporter permease 156579 2885399 ECA0135 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_048263.1 155680 R 218491 CDS YP_048264.1 50119097 2885478 complement(156588..157508) 1 NC_004547.2 Similar to Escherichia coli hypothetical ABC transporter permease protein ylic or b0831 SWALL:YLIC_ECOLI (SWALL:P75798) (306 aa) fasta scores: E(): 4.3e-64, 52.94% id in 306 aa, and to Ralstonia solanacearum probable transmembrane ABC transporter protein rsc1381 or rs04750 SWALL:Q8XZL4 (EMBL:AL646064) (307 aa) fasta scores: E(): 5.6e-63, 54.6% id in 304 aa; ABC transporter permease 157508 2885478 ECA0136 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_048264.1 156588 R 218491 CDS YP_048265.1 50119098 2885479 complement(157527..159068) 1 NC_004547.2 Similar to Salmonella typhi ABC transporter periplasmic binding protein YliB SWALL:Q8Z863 (EMBL:AL627268) (512 aa) fasta scores: E(): 1e-78, 41% id in 517 aa, and to Escherichia coli binding protein YliB precursor SWALL:YLIB_ECOLI (SWALL:P75797) (512 aa) fasta scores: E(): 5.5e-78, 42.3% id in 513 aa; ABC transporter periplasmic-binding protein 159068 2885479 ECA0137 Pectobacterium atrosepticum SCRI1043 ABC transporter periplasmic-binding protein YP_048265.1 157527 R 218491 CDS YP_048266.1 50119099 2885480 complement(159155..161014) 1 NC_004547.2 Similar to Salmonella typhimurium ATPase components of ABC-type transport system, containing duplicated atpase domain YliA SWALL:Q8ZQM4 (EMBL:AE008735) (623 aa) fasta scores: E(): 1.3e-118, 57% id in 607 aa, and to Escherichia coli hypothetical ABC transporter ATP-binding protein YliA SWALL:YLIA_ECOLI (SWALL:P75796) (629 aa) fasta scores: E(): 5.6e-117, 55.66% id in 609 aa; ABC transporter ATP-binding protein 161014 2885480 ECA0138 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_048266.1 159155 R 218491 CDS YP_048267.1 50119100 2885394 complement(161071..162039) 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein YcjG SWALL:AAN80263 (EMBL:AE016760) (335 aa) fasta scores: E(): 6.9e-54, 47.35% id in 321 aa, and to Yersinia pestis mandelate racemase / muconate lactonizing protein ypo2341 SWALL:Q8ZE43 (EMBL:AJ414152) (324 aa) fasta scores: E(): 5.4e-52, 47.33% id in 319 aa; mandelate racemase/muconate lactonizing family protein 162039 2885394 ECA0139 Pectobacterium atrosepticum SCRI1043 mandelate racemase/muconate lactonizing family protein YP_048267.1 161071 R 218491 CDS YP_048268.1 50119101 2885028 162282..162998 1 NC_004547.2 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; ribonuclease PH 162998 rph 2885028 rph Pectobacterium atrosepticum SCRI1043 ribonuclease PH YP_048268.1 162282 D 218491 CDS YP_048269.1 50119102 2882677 163345..163986 1 NC_004547.2 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 163986 pyrE 2882677 pyrE Pectobacterium atrosepticum SCRI1043 orotate phosphoribosyltransferase YP_048269.1 163345 D 218491 CDS YP_048270.1 50119103 2884225 complement(164389..164985) 1 NC_004547.2 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; nucleoid occlusion protein 164985 slmA 2884225 slmA Pectobacterium atrosepticum SCRI1043 nucleoid occlusion protein YP_048270.1 164389 R 218491 CDS YP_048271.1 50119104 2881856 complement(165111..165569) 1 NC_004547.2 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 165569 dut 2881856 dut Pectobacterium atrosepticum SCRI1043 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_048271.1 165111 R 218491 CDS YP_048272.1 50119105 2883561 complement(165547..166824) 1 NC_004547.2 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 166824 dfp 2883561 dfp Pectobacterium atrosepticum SCRI1043 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_048272.1 165547 R 218491 CDS YP_048273.1 50119106 2882880 166978..167643 1 NC_004547.2 Involved in DNA double-strand break repair and recombination. Promotes the annealing of complementary single-stranded DNA and by simulation of RAD51 recombinase; DNA repair protein RadC 167643 radC 2882880 radC Pectobacterium atrosepticum SCRI1043 DNA repair protein RadC YP_048273.1 166978 D 218491 CDS YP_048274.1 50119107 2883079 167881..168117 1 NC_004547.2 required for 70S ribosome assembly; 50S ribosomal protein L28 168117 rpmB 2883079 rpmB Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L28 YP_048274.1 167881 D 218491 CDS YP_048275.1 50119108 2884490 168129..168296 1 NC_004547.2 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 168296 rpmG 2884490 rpmG Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L33 YP_048275.1 168129 D 218491 CDS YP_048276.1 50119109 2881463 168516..169325 1 NC_004547.2 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; formamidopyrimidine-DNA glycosylase 169325 mutM 2881463 mutM Pectobacterium atrosepticum SCRI1043 formamidopyrimidine-DNA glycosylase YP_048276.1 168516 D 218491 CDS YP_048277.1 50119110 2885395 169392..170366 1 NC_004547.2 Similar to Yersinia pestis sugar transferase RafQ SWALL:Q8ZJC7 (EMBL:AJ414141) (326 aa) fasta scores: E(): 8.7e-82, 60.06% id in 323 aa, and to Serratia marcescens heptosyliii transferase WaaQ SWALL:Q9X979 (EMBL:U52844) (337 aa) fasta scores: E(): 7.2e-12, 26.23% id in 343 aa, and to Escherichia coli WaaQ SWALL:Q9R9D5 (EMBL:AF019746) (340 aa) fasta scores: E(): 3.2e-08, 23.25% id in 301 aa; sugar transferase 170366 2885395 ECA0149 Pectobacterium atrosepticum SCRI1043 sugar transferase YP_048277.1 169392 D 218491 CDS YP_048278.1 50119111 2884737 complement(170375..170854) 1 NC_004547.2 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 170854 coaD 2884737 coaD Pectobacterium atrosepticum SCRI1043 phosphopantetheine adenylyltransferase YP_048278.1 170375 R 218491 CDS YP_048279.1 50119112 2884538 complement(170891..172168) 1 NC_004547.2 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 172168 kdtA 2884538 kdtA Pectobacterium atrosepticum SCRI1043 3-deoxy-D-manno-octulosonic-acid transferase YP_048279.1 170891 R 218491 CDS YP_048280.1 50119113 2885396 complement(172396..173259) 1 NC_004547.2 Similar to Paracoccidioides brasiliensis mannosyltransferase SWALL:Q96WZ3 (EMBL:AF374353) (357 aa) fasta scores: E(): 0.00027, 26.86% id in 201 aa, and to Pasteurella piscicida capsular polysaccharide SWALL:Q8VW69 (EMBL:AB074290) (315 aa) fasta scores: E(): 1, 22.46% id in 187 aa; glycosyltransferase 173259 2885396 ECA0152 Pectobacterium atrosepticum SCRI1043 glycosyltransferase YP_048280.1 172396 R 218491 CDS YP_048281.1 50119114 2884738 complement(173307..174074) 1 NC_004547.2 Similar to Serratia marcescens lipopolysaccharide core biosynthesis glycosyl transferase KdtX SWALL:KDTX_SERMA (SWALL:Q54435) (257 aa) fasta scores: E(): 3.5e-66, 65.72% id in 248 aa, and to Yersinia enterocolitica glucosyl-transferase WaaE SWALL:Q8RSW8 (EMBL:AY075041) (257 aa) fasta scores: E(): 3.5e-66, 65.72% id in 248 aa; lipopolysaccharide core biosynthesis glycosyl transferase 174074 kdtX 2884738 kdtX Pectobacterium atrosepticum SCRI1043 lipopolysaccharide core biosynthesis glycosyl transferase YP_048281.1 173307 R 218491 CDS YP_048282.1 50119115 2882358 174161..174907 1 NC_004547.2 Similar to Edwardsiella tarda beta1,4-galactosyltransferase WaaX SWALL:AAL82722 (EMBL:AY078508) (251 aa) fasta scores: E(): 9.1e-32, 40.96% id in 249 aa, and to Escherichia coli beta1,4-galactosyltransferase WaaX SWALL:Q9ZIS2 (EMBL:AF019747) (257 aa) fasta scores: E(): 2.4e-09, 26.89% id in 264 aa; beta1,4-galactosyltransferase 174907 waaX 2882358 waaX Pectobacterium atrosepticum SCRI1043 beta1,4-galactosyltransferase YP_048282.1 174161 D 218491 CDS YP_048283.1 50119116 2885391 174978..175163 1 NC_004547.2 Doubtful CDS. No significant database matches; hypothetical protein 175163 2885391 ECA0155 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048283.1 174978 D 218491 CDS YP_048284.1 50119117 2885392 complement(175283..176065) 1 NC_004547.2 No significant database matches.; hypothetical protein 176065 2885392 ECA0156 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048284.1 175283 R 218491 CDS YP_048285.1 50119118 2882224 complement(176214..177230) 1 NC_004547.2 Similar to Escherichia coli lipopolysaccharide 1,2-glucosyltransferase RfaJ or WaaJ or b3626 SWALL:RFAJ_ECOLI (SWALL:P27129) (338 aa) fasta scores: E(): 4.4e-63, 49.69% id in 330 aa, and to Salmonella typhimurium lipopolysaccharide 1,2-glucosyltransferase RfaJ or WaaJ or stm3717 SWALL:RFAJ_SALTY (SWALL:P19817) (336 aa) fasta scores: E(): 5.6e-66, 53.98% id in 326 aa; lipopolysaccharide 1,2-glucosyltransferase 177230 waaJ 2882224 waaJ Pectobacterium atrosepticum SCRI1043 lipopolysaccharide 1,2-glucosyltransferase YP_048285.1 176214 R 218491 CDS YP_048286.1 50119119 2882223 complement(177284..178294) 1 NC_004547.2 Similar to Escherichia coli lipopolysaccharide 1,3-galactosyltransferase RfaI or WaaI or b3627 SWALL:RFAI_ECOLI (SWALL:P27128) (339 aa) fasta scores: E(): 7.7e-60, 44.21% id in 337 aa, and to Salmonella typhimurium lipopolysaccharide 1,3-galactosyltransferase RfaI or WaaI or stm3718 SWALL:RFAI_SALTY (SWALL:P19816) (337 aa) fasta scores: E(): 2e-64, 48.21% id in 336 aa; lipopolysaccharide 1,3-galactosyltransferase 178294 waaI 2882223 waaI Pectobacterium atrosepticum SCRI1043 lipopolysaccharide 1,3-galactosyltransferase YP_048286.1 177284 R 218491 CDS YP_048287.1 50119120 2882702 complement(178361..179479) 1 NC_004547.2 Similar to Escherichia coli lipopolysaccharide core biosynthesis protein Rfag or WaaG or pcsa or b3631 SWALL:RFAG_ECOLI (SWALL:P25740) (374 aa) fasta scores: E(): 1.2e-87, 58.69% id in 368 aa, and to Salmonella typhimurium lipopolysaccharide core biosynthesis protein Rfag or WaaG or stm3722 SWALL:O68269 (EMBL:AF026386) (374 aa) fasta scores: E(): 1.5e-89, 60.05% id in 368 aa; lipopolysaccharide core biosynthesis protein 179479 waaG 2882702 waaG Pectobacterium atrosepticum SCRI1043 lipopolysaccharide core biosynthesis protein YP_048287.1 178361 R 218491 CDS YP_048288.1 50119121 2882407 complement(179476..180546) 1 NC_004547.2 Similar to Escherichia coli lipopolysaccharide core biosynthesis glycosyl transferase RfaQ or WaaQ or b3632 SWALL:RFAQ_ECOLI (SWALL:P25742) (344 aa) fasta scores: E(): 1.3e-65, 52.69% id in 334 aa, and to Salmonella typhimurium lipopolysaccharide core biosynthesis, modification of heptose region of core RfaQ or stm3723 SWALL:O68270 (EMBL:AF026386) (344 aa) fasta scores: E(): 1.2e-64, 51.79% id in 334 aa; lipopolysaccharide core biosynthesis protein 180546 waaQ 2882407 waaQ Pectobacterium atrosepticum SCRI1043 lipopolysaccharide core biosynthesis protein YP_048288.1 179476 R 218491 CDS YP_048289.1 50119122 2882406 complement(180543..181769) 1 NC_004547.2 Similar to Escherichia coli O-antigen ligase RfaL or WaaL or b3622 SWALL:RFAL_ECOLI (SWALL:P27243) (419 aa) fasta scores: E(): 2.7e-28, 30.54% id in 406 aa. Also similar to ECA0162 (36.735% id. in 392 aa overlap); O-antigen ligase 181769 waaL2 2882406 waaL2 Pectobacterium atrosepticum SCRI1043 O-antigen ligase YP_048289.1 180543 R 218491 CDS YP_048290.1 50119123 2882405 complement(182261..183544) 1 NC_004547.2 Similar to Escherichia coli O-antigen ligase RfaL or WaaL or b3622 SWALL:RFAL_ECOLI (SWALL:P27243) (419 aa) fasta scores: E(): 1.2e-28, 29.22% id in 414 aa, and to Serratia marcescens lipid a core:surface polymer ligase WaaL SWALL:Q936B4 (EMBL:U52844) (413 aa) fasta scores: E(): 1.1e-39, 33.76% id in 385 aa. Also similar to ECA0161 (36.735% id. in 392 aa overlap); O-antigen ligase 183544 waaL1 2882405 waaL1 Pectobacterium atrosepticum SCRI1043 O-antigen ligase YP_048290.1 182261 R 218491 CDS YP_048291.1 50119124 2882700 complement(183541..184524) 1 NC_004547.2 Similar to Escherichia coli lipopolysaccharide heptosyltransferase-1 RfaC or WaaC or Rfa-2 or b3621 SWALL:RFAC_ECOLI (SWALL:P24173) (319 aa) fasta scores: E(): 6.6e-89, 71.47% id in 319 aa, and to Serratia marcescens heptosyltransferase i WaaC SWALL:Q936B6 (EMBL:U52844) (321 aa) fasta scores: E(): 8.9e-98, 76.25% id in 320 aa; ADP-heptose--LPS heptosyltransferase 184524 waaC 2882700 waaC Pectobacterium atrosepticum SCRI1043 ADP-heptose--LPS heptosyltransferase YP_048291.1 183541 R 218491 CDS YP_048292.1 50119125 2882701 complement(184521..185588) 1 NC_004547.2 catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core; ADP-heptose--LPS heptosyltransferase 185588 waaF 2882701 waaF Pectobacterium atrosepticum SCRI1043 ADP-heptose--LPS heptosyltransferase YP_048292.1 184521 R 218491 CDS YP_048293.1 50119126 2885288 complement(185612..186544) 1 NC_004547.2 catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose; ADP-L-glycero-D-manno-heptose-6-epimerase 186544 rfaD 2885288 rfaD Pectobacterium atrosepticum SCRI1043 ADP-L-glycero-D-manno-heptose-6-epimerase YP_048293.1 185612 R 218491 CDS YP_048294.1 50119127 2885368 186786..187982 1 NC_004547.2 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; 2-amino-3-ketobutyrate CoA ligase 187982 kbl 2885368 kbl Pectobacterium atrosepticum SCRI1043 2-amino-3-ketobutyrate CoA ligase YP_048294.1 186786 D 218491 CDS YP_048295.1 50119128 2884307 187993..189078 1 NC_004547.2 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; L-threonine 3-dehydrogenase 189078 tdh 2884307 tdh Pectobacterium atrosepticum SCRI1043 L-threonine 3-dehydrogenase YP_048295.1 187993 D 218491 CDS YP_048296.1 50119129 2885393 complement(189183..190130) 1 NC_004547.2 Similar to Salmonella typhimurium periplasmic protein YigQ or stm3706 SWALL:Q8ZL54 (EMBL:AE008872) (320 aa) fasta scores: E(): 3.9e-70, 66.01% id in 306 aa, and to Escherichia coli hypothetical protein YibQ precursor SWALL:YIBQ_ECOLI (SWALL:P37691) (319 aa) fasta scores: E(): 3.1e-68, 66.55% id in 293 aa; hypothetical protein 190130 2885393 ECA0169 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048296.1 189183 R 218491 CDS YP_048297.1 50119130 2881250 complement(190133..191434) 1 NC_004547.2 Similar to Yersinia pestis membrane protein y0078 SWALL:AAM83673 (EMBL:AE013608) (456 aa) fasta scores: E(): 2.5e-78, 71.87% id in 416 aa, and to Salmonella typhi hypothetical protein Sty4090 SWALL:Q8Z2F1 (EMBL:AL627280) (427 aa) fasta scores: E(): 9.5e-72, 67.49% id in 403 aa, and to Escherichia coli hypothetical protein YibP SWALL:YIBP_ECOLI (SWALL:P37690) (419 aa) fasta scores: E(): 3.5e-71, 66.5% id in 403 aa; hypothetical protein 191434 2881250 ECA0170 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048297.1 190133 R 218491 CDS YP_048298.1 50119131 2881251 191679..192110 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo0065 SWALL:Q8ZJM9 (EMBL:AJ414141) (144 aa) fasta scores: E(): 1.2e-36, 69.78% id in 139 aa, and to Salmonella typhimurium, and Salmonella typhi YibN SWALL:Q8XEX1 (EMBL:AE008872) (143 aa) fasta scores: E(): 6e-34, 67.62% id in 139 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein YibN SWALL:YIBN_ECOLI (SWALL:P37688) (143 aa) fasta scores: E(): 1.8e-33, 66.18% id in 139 aa; rhodanese-related sulfurtransferase 192110 2881251 ECA0171 Pectobacterium atrosepticum SCRI1043 rhodanese-related sulfurtransferase YP_048298.1 191679 D 218491 CDS YP_048299.1 50119132 2884412 192299..192775 1 NC_004547.2 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; preprotein translocase subunit SecB 192775 secB 2884412 secB Pectobacterium atrosepticum SCRI1043 preprotein translocase subunit SecB YP_048299.1 192299 D 218491 CDS YP_048300.1 50119133 2885811 192775..193794 1 NC_004547.2 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 193794 gpsA 2885811 gpsA Pectobacterium atrosepticum SCRI1043 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_048300.1 192775 D 218491 CDS YP_048301.1 50119134 2882396 193935..194756 1 NC_004547.2 catalyzes the O-acetylation of serine; serine acetyltransferase 194756 cysE 2882396 cysE Pectobacterium atrosepticum SCRI1043 serine acetyltransferase YP_048301.1 193935 D 218491 CDS YP_048302.1 50119135 2881733 195065..195718 1 NC_004547.2 catalyzes the transfer of palmitate to lipid A; palmitoyl transferase 195718 pagP 2881733 pagP Pectobacterium atrosepticum SCRI1043 palmitoyl transferase YP_048302.1 195065 D 218491 CDS YP_048303.1 50119136 2881252 196154..196633 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2962 SWALL:Q8ZCM0 (EMBL:AJ414154) (161 aa) fasta scores: E(): 2e-36, 56.6% id in 159 aa, and to Escherichia coli O6 conserved hypothetical protein c3767 SWALL:AAN82211 (EMBL:AE016766) (159 aa) fasta scores: E(): 4.5e-35, 55.34% id in 159 aa; hypothetical protein 196633 2881252 ECA0176 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048303.1 196154 D 218491 CDS YP_048304.1 50119137 2881287 196650..197366 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c3766 SWALL:AAN82210 (EMBL:AE016766) (245 aa) fasta scores: E(): 1.6e-60, 62.39% id in 234 aa. No other database matches.; hypothetical protein 197366 2881287 ECA0177 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048304.1 196650 D 218491 CDS YP_048305.1 50119138 2881288 197367..197699 1 NC_004547.2 Similar to Escherichia coli hypothetical protein YgiZ SWALL:YGIZ_ECOLI (SWALL:Q46867) (110 aa) fasta scores: E(): 4.5e-13, 38.88% id in 108 aa; hypothetical protein 197699 2881288 ECA0178 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048305.1 197367 D 218491 CDS YP_048306.1 50119139 2881289 197935..198834 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo3790 SWALL:Q8ZAL1 (EMBL:AJ414159) (299 aa) fasta scores: E(): 2.1e-95, 75.08% id in 297 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical membrane protein YigM SWALL:YIGM_ECOLI (SWALL:P27849) (299 aa) fasta scores: E(): 2.9e-81, 65.31% id in 297 aa; hypothetical protein 198834 2881289 ECA0179 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048306.1 197935 D 218491 CDS YP_048307.1 50119140 2883537 complement(198740..199675) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri transcriptional activator protein MetR or b3828 or z5349 or ecs4758 or sf3906 SWALL:METR_ECOLI (SWALL:P19797) (317 aa) fasta scores: E(): 7.2e-105, 85.8% id in 310 aa; transcriptional activator protein 199675 metR 2883537 metR Pectobacterium atrosepticum SCRI1043 transcriptional activator protein YP_048307.1 198740 R 218491 CDS YP_048308.1 50119141 2883946 199780..202044 1 NC_004547.2 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 202044 metE 2883946 metE Pectobacterium atrosepticum SCRI1043 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_048308.1 199780 D 218491 CDS YP_048309.1 50119142 2881275 202590..204218 1 NC_004547.2 Similar to Salmonella typhi methyl-accepting chemotaxis protein II CheM SWALL:Q8Z3M1 (EMBL:AL627278) (522 aa) fasta scores: E(): 6.8e-69, 46.3% id in 514 aa, and to Escherichia coli methyl-accepting chemotaxis protein I Tsr or Ched SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 3.5e-50, 41.89% id in 549 aa; methyl-accepting chemotaxis protein 204218 2881275 ECA0182 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_048309.1 202590 D 218491 CDS YP_048310.1 50119143 2881276 204906..206567 1 NC_004547.2 Similar to Salmonella typhi methyl-accepting chemotaxis protein II CheM SWALL:Q8Z3M1 (EMBL:AL627278) (522 aa) fasta scores: E(): 2.2e-70, 47.66% id in 514 aa, and to Escherichia coli methyl-accepting chemotaxis protein I Tsr or Ched SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 1.2e-52, 42.03% id in 559 aa; methyl-accepting chemotaxis protein 206567 2881276 ECA0183 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_048310.1 204906 D 218491 CDS YP_048311.1 50119144 2881277 complement(206657..207484) 1 NC_004547.2 Similar to Pseudomonas putida, and Pseudomonas sp. carboxymethylenebutenolidase ClcD SWALL:CLCD_PSEPU (SWALL:P11453) (236 aa) fasta scores: E(): 2.2e-10, 28.31% id in 226 aa, and to Escherichia coli carboxymethylenebutenolidase YsgA or b3830 SWALL:DLHH_ECOLI (SWALL:P56262) (271 aa) fasta scores: E(): 2.4e-74, 67.03% id in 273 aa; carboxymethylenebutenolidase 207484 2881277 ECA0184 Pectobacterium atrosepticum SCRI1043 carboxymethylenebutenolidase YP_048311.1 206657 R 218491 CDS YP_048312.1 50119145 2884206 207819..208589 1 NC_004547.2 catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway; uridine phosphorylase 208589 udp 2884206 udp Pectobacterium atrosepticum SCRI1043 uridine phosphorylase YP_048312.1 207819 D 218491 CDS YP_048313.1 50119146 2882545 208739..209521 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3785 or y0445 SWALL:AAM84034 (EMBL:AJ414158) (276 aa) fasta scores: E(): 7.8e-34, 58.9% id in 275 aa; hypothetical protein 209521 2882545 ECA0186 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048313.1 208739 D 218491 CDS YP_048314.1 50119147 2885575 complement(209609..212248) 1 NC_004547.2 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; phosphoenolpyruvate carboxylase 212248 ppc 2885575 ppc Pectobacterium atrosepticum SCRI1043 phosphoenolpyruvate carboxylase YP_048314.1 209609 R 218491 CDS YP_048315.1 50119148 2882546 complement(212763..214136) 1 NC_004547.2 Similar to Erwinia chrysanthemi PTS system, beta-glucoside-specific IIabc component ArbF SWALL:PTBA_ERWCH (SWALL:P26207) (631 aa) fasta scores: E(): 2.9e-43, 32.79% id in 436 aa, and to Escherichia coli PTS system, beta-glucoside-specific IIabc component BglF or BglC or BglS or b3722 SWALL:PTBA_ECOLI (SWALL:P08722) (625 aa) fasta scores: E(): 6.4e-43, 31.15% id in 459 aa; PTS system transporter subunit IIABC 214136 2882546 ECA0188 Pectobacterium atrosepticum SCRI1043 PTS system transporter subunit IIABC YP_048315.1 212763 R 218491 CDS YP_048316.1 50119149 2882547 214457..215656 1 NC_004547.2 Similar to Escherichia coli RspA or b1581 SWALL:RSPA_ECOLI (SWALL:P38104) (404 aa) fasta scores: E(): 1e-20, 36.07% id in 402 aa, and to Streptomyces coelicolor SpaA or sco7629 or sc10f4.02 SWALL:P95726 (EMBL:X94190) (413 aa) fasta scores: E(): 6.1e-23, 39.03% id in 415 aa. Also similar to ECA0917 (starvation sensing protein, RspA) (36.070% id. in 402 aa overlap); mandelate racemase/muconate lactonizing protein 215656 2882547 ECA0189 Pectobacterium atrosepticum SCRI1043 mandelate racemase/muconate lactonizing protein YP_048316.1 214457 D 218491 CDS YP_048317.1 50119150 2882576 complement(215662..216387) 1 NC_004547.2 Similar to Bacillus halodurans transcriptional regulator bh3917 SWALL:Q9K616 (EMBL:AP001520) (261 aa) fasta scores: E(): 6.3e-11, 26.81% id in 220 aa, and to Escherichia coli fatty acyl responsive regulator FarR SWALL:FARR_ECOLI (SWALL:P13669) (240 aa) fasta scores: E(): 1.8e-09, 26.81% id in 220 aa; GntR family transcriptional regulator 216387 2882576 ECA0190 Pectobacterium atrosepticum SCRI1043 GntR family transcriptional regulator YP_048317.1 215662 R 218491 CDS YP_048318.1 50119151 2884141 complement(216430..217581) 1 NC_004547.2 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; acetylornithine deacetylase 217581 argE 2884141 argE Pectobacterium atrosepticum SCRI1043 acetylornithine deacetylase YP_048318.1 216430 R 218491 CDS YP_048319.1 50119152 2884145 217784..218788 1 NC_004547.2 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 218788 argC 2884145 argC Pectobacterium atrosepticum SCRI1043 N-acetyl-gamma-glutamyl-phosphate reductase YP_048319.1 217784 D 218491 CDS YP_048320.1 50119153 2884144 218826..219599 1 NC_004547.2 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 219599 argB 2884144 argB Pectobacterium atrosepticum SCRI1043 acetylglutamate kinase YP_048320.1 218826 D 218491 CDS YP_048321.1 50119154 2884137 219661..221034 1 NC_004547.2 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 221034 argH 2884137 argH Pectobacterium atrosepticum SCRI1043 argininosuccinate lyase YP_048321.1 219661 D 218491 CDS YP_048322.1 50119155 2885045 221269..222798 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri DNA recombination protein RmuC or b3832 or z5354 or ecs4762 or sf3910 SWALL:RMUC_ECOLI (SWALL:P27850) (475 aa) fasta scores: E(): 3.2e-96, 72.13% id in 427 aa; DNA recombination protein 222798 rmuC 2885045 rmuC Pectobacterium atrosepticum SCRI1043 DNA recombination protein YP_048322.1 221269 D 218491 CDS YP_048323.1 50119156 2884214 222967..223722 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri ubiquinone/menaquinone biosynthesis methyltransferase UbiE or b3833 or z5355 or ecs4763 or sf3911 SWALL:UBIE_ECOLI (SWALL:P27851) (251 aa) fasta scores: E(): 4.5e-76, 78.88% id in 251 aa; ubiquinone/menaquinone biosynthesis methyltransferase 223722 ubiE 2884214 ubiE Pectobacterium atrosepticum SCRI1043 ubiquinone/menaquinone biosynthesis methyltransferase YP_048323.1 222967 D 218491 CDS YP_048324.1 50119157 2882577 223735..224358 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3780 SWALL:Q8ZAM0 (EMBL:AJ414158) (210 aa) fasta scores: E(): 1.8e-42, 56.65% id in 203 aa, and to Escherichia coli, and Shigella flexneri hypothetical protein YigP SWALL:YIGP_ECOLI (SWALL:P27852) (201 aa) fasta scores: E(): 1.2e-35, 48.78% id in 205 aa; hypothetical protein 224358 2882577 ECA0197 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048324.1 223735 D 218491 CDS YP_048325.1 50119158 2884217 224355..225995 1 NC_004547.2 an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; ubiquinone biosynthesis protein UbiB 225995 ubiB 2884217 ubiB Pectobacterium atrosepticum SCRI1043 ubiquinone biosynthesis protein UbiB YP_048325.1 224355 D 218491 CDS YP_048326.1 50119159 2884321 226078..226338 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri sec-independent protein translocase protein TatA or MttA1 or b3836 or c4785 or z5358 or ecs4766 or sf3914 SWALL:TATA_ECOLI (SWALL:O65938) (89 aa) fasta scores: E(): 2.5e-17, 64.83% id in 91 aa; sec-independent protein translocase 226338 tatA 2884321 tatA Pectobacterium atrosepticum SCRI1043 sec-independent protein translocase YP_048326.1 226078 D 218491 CDS YP_048327.1 50119160 2884322 226342..226935 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri sec-independent protein translocase protein TatB or MttA2 or b3838 or z5359 or ecs4767 or sf3915 SWALL:TATB_ECOLI (SWALL:O69415) (171 aa) fasta scores: E(): 4.4e-22, 52.82% id in 195 aa; sec-independent protein translocase 226935 tatB 2884322 tatB Pectobacterium atrosepticum SCRI1043 sec-independent protein translocase YP_048327.1 226342 D 218491 CDS YP_048328.1 50119161 2884317 226939..227694 1 NC_004547.2 with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane; twin-arginine protein translocation system subunit TatC 227694 tatC 2884317 tatC Pectobacterium atrosepticum SCRI1043 twin-arginine protein translocation system subunit TatC YP_048328.1 226939 D 218491 CDS YP_048329.1 50119162 2884318 227773..228555 1 NC_004547.2 magnesium dependent; not involved in the Sec-independent protein export system; DNase TatD 228555 tatD 2884318 tatD Pectobacterium atrosepticum SCRI1043 DNase TatD YP_048329.1 227773 D 218491 CDS YP_048330.1 50119163 2885595 228573..229595 1 NC_004547.2 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 229595 hemB 2885595 hemB Pectobacterium atrosepticum SCRI1043 delta-aminolevulinic acid dehydratase YP_048330.1 228573 D 218491 CDS YP_048331.1 50119164 2885290 complement(229656..230144) 1 NC_004547.2 Similar to Erwinia chrysanthemi transcriptional activator RfaH SWALL:Q9ZEL8 (EMBL:AJ132239) (162 aa) fasta scores: E(): 9.6e-51, 81.48% id in 134 aa, and to Escherichia coli, and Escherichia coli O157:H7 transcriptional activator RfaH or HlyT or SfrB or b3842 or z5362 or ecs4770 SWALL:RFAH_ECOLI (SWALL:P26614) (162 aa) fasta scores: E(): 1.2e-43, 69.57% id in 161 aa.; transcriptional activator RfaH 230144 rfaH 2885290 rfaH Pectobacterium atrosepticum SCRI1043 transcriptional activator RfaH YP_048331.1 229656 R 218491 CDS YP_048332.1 50119165 2884213 230345..231841 1 NC_004547.2 catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 231841 ubiD 2884213 ubiD Pectobacterium atrosepticum SCRI1043 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_048332.1 230345 D 218491 CDS YP_048333.1 50119166 2885065 231891..232592 1 NC_004547.2 NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; FMN reductase 232592 fre 2885065 fre Pectobacterium atrosepticum SCRI1043 FMN reductase YP_048333.1 231891 D 218491 CDS YP_048334.1 50119167 2883863 complement(232686..233849) 1 NC_004547.2 FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; 3-ketoacyl-CoA thiolase 233849 fadA 2883863 fadA Pectobacterium atrosepticum SCRI1043 3-ketoacyl-CoA thiolase YP_048334.1 232686 R 218491 CDS YP_048335.1 50119168 2883864 complement(233861..236050) 1 NC_004547.2 includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; multifunctional fatty acid oxidation complex subunit alpha 236050 fadB 2883864 fadB Pectobacterium atrosepticum SCRI1043 multifunctional fatty acid oxidation complex subunit alpha YP_048335.1 233861 R 218491 CDS YP_048336.1 50119169 2885131 236236..237567 1 NC_004547.2 catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters; proline dipeptidase 237567 pepQ 2885131 pepQ Pectobacterium atrosepticum SCRI1043 proline dipeptidase YP_048336.1 236236 D 218491 CDS YP_048337.1 50119170 2882578 237567..238178 1 NC_004547.2 Similar to Escherichia coli O157:H7 hypothetical protein YigZ SWALL:Q8X8I0 (EMBL:AE005615) (205 aa) fasta scores: E(): 1.9e-44, 63.86% id in 202 aa, and to Escherichia coli hypothetical protein YigZ SWALL:YIGZ_ECOLI (SWALL:P27862) (204 aa) fasta scores: E(): 2.9e-44, 63.86% id in 202 aa; hypothetical protein 238178 2882578 ECA0210 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048337.1 237567 D 218491 CDS YP_048338.1 50119171 2884248 238222..239673 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri Trk system potassium uptake protein TrkH or b3849 or z5371 or ecs4777 or sf3925 SWALL:TRKH_ECOLI (SWALL:P21166) (483 aa) fasta scores: E(): 2e-172, 89.02% id in 483 aa; potassium transporter 239673 trkH 2884248 trkH Pectobacterium atrosepticum SCRI1043 potassium transporter YP_048338.1 238222 D 218491 CDS YP_048339.1 50119172 2882904 239695..240234 1 NC_004547.2 catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX; protoporphyrinogen oxidase 240234 hemG 2882904 hemG Pectobacterium atrosepticum SCRI1043 protoporphyrinogen oxidase YP_048339.1 239695 D 218491 CDS YP_048340.1 50119173 2881741 245968..247005 1 NC_004547.2 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 247005 murB 2881741 murB Pectobacterium atrosepticum SCRI1043 UDP-N-acetylenolpyruvoylglucosamine reductase YP_048340.1 245968 D 218491 CDS YP_048341.1 50119174 2882501 247002..247961 1 NC_004547.2 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 247961 birA 2882501 birA Pectobacterium atrosepticum SCRI1043 biotin--protein ligase YP_048341.1 247002 D 218491 CDS YP_048342.1 50119175 2884957 complement(247989..248939) 1 NC_004547.2 catalyzes the formation of (R)-4'-phosphopantothenate in coenzyme A biosynthesis; pantothenate kinase 248939 coaA 2884957 coaA Pectobacterium atrosepticum SCRI1043 pantothenate kinase YP_048342.1 247989 R 218491 CDS YP_048343.1 50119176 2884226 250357..251541 1 NC_004547.2 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 251541 tuf 2884226 tuf Pectobacterium atrosepticum SCRI1043 elongation factor Tu YP_048343.1 250357 D 218491 CDS YP_048344.1 50119177 2884408 251779..252162 1 NC_004547.2 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 252162 secE 2884408 secE Pectobacterium atrosepticum SCRI1043 preprotein translocase subunit SecE YP_048344.1 251779 D 218491 CDS YP_048345.1 50119178 2883753 252164..252709 1 NC_004547.2 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 252709 nusG 2883753 nusG Pectobacterium atrosepticum SCRI1043 transcription antitermination protein NusG YP_048345.1 252164 D 218491 CDS YP_048346.1 50119179 2883927 252872..253300 1 NC_004547.2 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 253300 rplK 2883927 rplK Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L11 YP_048346.1 252872 D 218491 CDS YP_048347.1 50119180 2885024 253304..254008 1 NC_004547.2 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 254008 rplA 2885024 rplA Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L1 YP_048347.1 253304 D 218491 CDS YP_048348.1 50119181 2883968 254326..254823 1 NC_004547.2 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 254823 rplJ 2883968 rplJ Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L10 YP_048348.1 254326 D 218491 CDS YP_048349.1 50119182 2883928 254890..255255 1 NC_004547.2 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 255255 rplL 2883928 rplL Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L7/L12 YP_048349.1 254890 D 218491 CDS YP_048350.1 50119183 2884489 255584..259612 1 NC_004547.2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta 259612 rpoB 2884489 rpoB Pectobacterium atrosepticum SCRI1043 DNA-directed RNA polymerase subunit beta YP_048350.1 255584 D 218491 CDS YP_048351.1 50119184 2884486 259736..263959 1 NC_004547.2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; DNA-directed RNA polymerase subunit beta' 263959 rpoC 2884486 rpoC Pectobacterium atrosepticum SCRI1043 DNA-directed RNA polymerase subunit beta' YP_048351.1 259736 D 218491 CDS YP_048352.1 50119185 2884390 264271..265668 1 NC_004547.2 Similar to Escherichia coli shikimate transporter ShiA or b1981 SWALL:SHIA_ECOLI (SWALL:P76350) (438 aa) fasta scores: E(): 4.7e-125, 73.57% id in 420 aa; shikimate transporter 265668 shiA 2884390 shiA Pectobacterium atrosepticum SCRI1043 shikimate transporter YP_048352.1 264271 D 218491 CDS YP_048353.1 50119186 2882582 complement(265739..265930) 1 NC_004547.2 Similar to Escherichia coli hypothetical protein YjiS SWALL:YJIS_ECOLI (SWALL:P39390) (54 aa) fasta scores: E(): 6.1e-06, 44.44% id in 63 aa; hypothetical protein 265930 2882582 ECA0226 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048353.1 265739 R 218491 CDS YP_048354.1 50119187 2882583 266104..267540 1 NC_004547.2 Similar to Pseudomonas putida transcriptional regulator, GntR family pp5275 SWALL:AAN70840 (EMBL:AE016793) (496 aa) fasta scores: E(): 2.2e-120, 61% id in 477 aa, and to Escherichia coli hypothetical protein YjiR SWALL:YJIR_ECOLI (SWALL:P39389) (470 aa) fasta scores: E(): 4.1e-118, 60.55% id in 469 aa; GntR family transcriptional regulator 267540 2882583 ECA0227 Pectobacterium atrosepticum SCRI1043 GntR family transcriptional regulator YP_048354.1 266104 D 218491 CDS YP_048355.1 50119188 2884291 complement(267925..269046) 1 NC_004547.2 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; thiamine biosynthesis protein ThiH 269046 thiH 2884291 thiH Pectobacterium atrosepticum SCRI1043 thiamine biosynthesis protein ThiH YP_048355.1 267925 R 218491 CDS YP_048356.1 50119189 2884297 complement(269043..269828) 1 NC_004547.2 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 269828 thiG 2884297 thiG Pectobacterium atrosepticum SCRI1043 thiazole synthase YP_048356.1 269043 R 218491 CDS YP_048357.1 50119190 2884285 complement(269830..270030) 1 NC_004547.2 with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; sulfur carrier protein ThiS 270030 thiS 2884285 thiS Pectobacterium atrosepticum SCRI1043 sulfur carrier protein ThiS YP_048357.1 269830 R 218491 CDS YP_048358.1 50119191 2884296 complement(270027..270806) 1 NC_004547.2 catalyzes the adenylation of ThiS which is involved in the formation of 5-methyl-4-(beta-hydroxyethyl)thiazole phosphate; thiamine biosynthesis protein ThiF 270806 thiF 2884296 thiF Pectobacterium atrosepticum SCRI1043 thiamine biosynthesis protein ThiF YP_048358.1 270027 R 218491 CDS YP_048359.1 50119192 2884295 complement(270808..271449) 1 NC_004547.2 catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate; thiamine-phosphate pyrophosphorylase 271449 thiE 2884295 thiE Pectobacterium atrosepticum SCRI1043 thiamine-phosphate pyrophosphorylase YP_048359.1 270808 R 218491 CDS YP_048360.1 50119193 2884299 complement(271446..273440) 1 NC_004547.2 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 273440 thiC 2884299 thiC Pectobacterium atrosepticum SCRI1043 thiamine biosynthesis protein ThiC YP_048360.1 271446 R 218491 CDS YP_048361.1 50119194 2884457 complement(273815..274276) 1 NC_004547.2 binds specifically to the major sigma factor sigma 70; active in stationary phase; anti-RNA polymerase sigma 70 factor 274276 rsd 2884457 rsd Pectobacterium atrosepticum SCRI1043 anti-RNA polymerase sigma 70 factor YP_048361.1 273815 R 218491 CDS YP_048362.1 50119195 2884894 274385..275167 1 NC_004547.2 can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; NADH pyrophosphatase 275167 nudC 2884894 nudC Pectobacterium atrosepticum SCRI1043 NADH pyrophosphatase YP_048362.1 274385 D 218491 CDS YP_048363.1 50119196 2885669 275283..276347 1 NC_004547.2 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 276347 hemE 2885669 hemE Pectobacterium atrosepticum SCRI1043 uroporphyrinogen decarboxylase YP_048363.1 275283 D 218491 CDS YP_048364.1 50119197 2882584 277129..277719 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi hypothetical protein YjaG SWALL:YJAG_SALTY (SWALL:Q9L9I2) (196 aa) fasta scores: E(): 2.3e-65, 82.14% id in 196 aa, and to Escherichia coli hypothetical protein YjaG SWALL:YJAG_ECOLI (SWALL:P32680) (196 aa) fasta scores: E(): 3.1e-63, 79.08% id in 196 aa; lipoprotein 277719 2882584 ECA0237 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_048364.1 277129 D 218491 CDS YP_048365.1 50119198 2883724 277924..278196 1 NC_004547.2 histone-like DNA-binding protein; transcriptional regulator HU subunit alpha 278196 hupA 2883724 hupA Pectobacterium atrosepticum SCRI1043 transcriptional regulator HU subunit alpha YP_048365.1 277924 D 218491 CDS YP_048366.1 50119199 2882597 278201..278887 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo3730 SWALL:Q8ZAR1 (EMBL:AJ414158) (233 aa) fasta scores: E(): 7.2e-42, 50.87% id in 230 aa, and to Salmonella typhi hypothetical protein sty3714 SWALL:Q8Z330 (EMBL:AL627279) (230 aa) fasta scores: E(): 3.3e-30, 38.69% id in 230 aa; lipoprotein 278887 2882597 ECA0239 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_048366.1 278201 D 218491 CDS YP_048367.1 50119200 2881846 complement(278956..280242) 1 NC_004547.2 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 280242 purD 2881846 purD Pectobacterium atrosepticum SCRI1043 phosphoribosylamine--glycine ligase YP_048367.1 278956 R 218491 CDS YP_048368.1 50119201 2881327 complement(280260..281849) 1 NC_004547.2 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 281849 purH 2881327 purH Pectobacterium atrosepticum SCRI1043 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_048368.1 280260 R 218491 CDS YP_048369.1 50119202 2885738 complement(287820..288581) 1 NC_004547.2 Similar to Rhizobium leguminosarum general L-amino acid transport ATP-binding protein AapP SWALL:AAPP_RHILV (SWALL:Q52815) (257 aa) fasta scores: E(): 8.6e-70, 75.1% id in 245 aa, and to Escherichia coli hypothetical amino-acid ABC transporter ATP-binding protein yhdz yhdz or b3271 SWALL:YHDZ_ECOLI (SWALL:P45769) (252 aa) fasta scores: E(): 7.3e-81, 85.77% id in 253 aa; L-amino acid ABC transporter ATP-binding protein 288581 aapP 2885738 aapP Pectobacterium atrosepticum SCRI1043 L-amino acid ABC transporter ATP-binding protein YP_048369.1 287820 R 218491 CDS YP_048370.1 50119203 2885737 complement(288590..289684) 1 NC_004547.2 Similar to Rhizobium leguminosarum general L-amino acid transport system permease protein AapM SWALL:AAPM_RHILV (SWALL:Q52814) (384 aa) fasta scores: E(): 6.9e-63, 51.37% id in 364 aa, and to Escherichia coli hypothetical amino-acid ABC transporter permease protein yhdy or b3270 SWALL:YHDY_ECOLI (SWALL:P45768) (367 aa) fasta scores: E(): 1.4e-116, 81.37% id in 349 aa; L-amino acid ABC transporter permease 289684 aapM 2885737 aapM Pectobacterium atrosepticum SCRI1043 L-amino acid ABC transporter permease YP_048370.1 288590 R 218491 CDS YP_048371.1 50119204 2885270 complement(289694..290872) 1 NC_004547.2 Similar to Rhizobium leguminosarum general L-amino acid transport system permease protein AapQ SWALL:AAPQ_RHILV (SWALL:Q52813) (400 aa) fasta scores: E(): 9e-62, 48.04% id in 383 aa, and to Escherichia coli hypothetical amino-acid ABC transporter permease protein yhdx or b3269 SWALL:YHDX_ECOLI (SWALL:P45767) (362 aa) fasta scores: E(): 2.5e-106, 75.77% id in 355 aa; L-amino acid ABC transporter permease 290872 aapQ 2885270 aapQ Pectobacterium atrosepticum SCRI1043 L-amino acid ABC transporter permease YP_048371.1 289694 R 218491 CDS YP_048372.1 50119205 2885736 complement(290928..291953) 1 NC_004547.2 Similar to Rhizobium leguminosarum general L-amino acid-binding periplasmic protein AapJ precursor AapJ SWALL:AAPJ_RHILV (SWALL:Q52812) (341 aa) fasta scores: E(): 1.9e-78, 57.72% id in 343 aa, and to Escherichia coli amino-acid ABC transporter binding protein yhdw precursor yhdw or b3268 SWALL:YHDW_ECOLI (SWALL:P45766) (341 aa) fasta scores: E(): 6.6e-115, 84.45% id in 341 aa; general L-amino ABC transporter binding protein 291953 aapJ 2885736 aapJ Pectobacterium atrosepticum SCRI1043 general L-amino ABC transporter binding protein YP_048372.1 290928 R 218491 CDS YP_048373.1 50119206 2882598 complement(292333..292998) 1 NC_004547.2 Similar to Rhizobium meliloti amino-acid transport system permease ABC transporter protein r03276 SWALL:Q92L15 (EMBL:AL591793) (226 aa) fasta scores: E(): 4.3e-53, 68.8% id in 218 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri hypothetical amino-acid ABC transporter permease protein YecS SWALL:AAN43512 (EMBL:AE000284) (222 aa) fasta scores: E(): 1.8e-34, 50% id in 218 aa; amino acid transport system permease 292998 2882598 ECA0246 Pectobacterium atrosepticum SCRI1043 amino acid transport system permease YP_048373.1 292333 R 218491 CDS YP_048374.1 50119207 2882599 complement(293088..293855) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 cystine-binding periplasmic protein precursor FliY or b1920 or c2335 SWALL:FLIY_ECOLI (SWALL:P39174) (266 aa) fasta scores: E(): 1.2e-23, 36.01% id in 261 aa, and to Lactobacillus fermentum basic surface protein SWALL:O06530 (EMBL:U97348) (264 aa) fasta scores: E(): 6.2e-28, 37.97% id in 266 aa; cystine-binding periplasmic protein 293855 2882599 ECA0247 Pectobacterium atrosepticum SCRI1043 cystine-binding periplasmic protein YP_048374.1 293088 R 218491 CDS YP_048375.1 50119208 2882555 complement(294012..294410) 1 NC_004547.2 Similar to Anabaena sp. hypothetical protein Alr2599 alr2599 SWALL:Q8YTW4 (EMBL:AP003590) (131 aa) fasta scores: E(): 1.9e-25, 64.28% id in 112 aa, and to Escherichia coli, and Shigella flexneri hypothetical protein YtfH SWALL:YTFH_ECOLI (SWALL:P39316) (126 aa) fasta scores: E(): 3.3e-25, 62.38% id in 109 aa; transcriptional regulator 294410 2882555 ECA0248 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_048375.1 294012 R 218491 CDS YP_048376.1 50119209 2882556 294649..295059 1 NC_004547.2 Similar to Ralstonia solanacearum hypothetical protein rsc0616 or rs01517 SWALL:Q8Y1S3 (EMBL:AL646060) (156 aa) fasta scores: E(): 1.2e-33, 66.66% id in 135 aa, and to Xanthomonas axonopodis hypothetical protein Xac0357 SWALL:Q8PQG8 (EMBL:AE011661) (179 aa) fasta scores: E(): 1.2e-15, 42.24% id in 116 aa; hypothetical protein 295059 2882556 ECA0249 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048376.1 294649 D 218491 CDS YP_048377.1 50119210 2882557 295276..296334 1 NC_004547.2 Similar to Pseudomonas syringae oxidoreductase, aldo/keto reductase family pspto3075 SWALL:Q880S6 (EMBL:AE016867) (350 aa) fasta scores: E(): 1.5e-90, 66.57% id in 350 aa, and to Xanthomonas axonopodis L-fucose dehydrogenase xac0158 SWALL:Q8PR11 (EMBL:AE011640) (349 aa) fasta scores: E(): 6.9e-73, 52.99% id in 351 aa; oxidoreductase 296334 2882557 ECA0250 Pectobacterium atrosepticum SCRI1043 oxidoreductase YP_048377.1 295276 D 218491 CDS YP_048378.1 50119211 2882523 296589..297767 1 NC_004547.2 No significant database matches.; hypothetical protein 297767 2882523 ECA0251 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048378.1 296589 D 218491 CDS YP_048379.1 50119212 2882524 297836..298240 1 NC_004547.2 Similar to Salmonella typhimurium cytoplasmic protein stm4186 SWALL:Q8ZKL3 (EMBL:AE008895) (135 aa) fasta scores: E(): 1.8e-24, 51.96% id in 127 aa, and to Escherichia coli O157:H7 hypothetical protein Z0414 SWALL:Q8X3L2 (EMBL:AE005211) (136 aa) fasta scores: E(): 7.2e-22, 48.43% id in 128 aa; hypothetical protein 298240 2882524 ECA0252 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048379.1 297836 D 218491 CDS YP_048380.1 50119213 2882284 complement(298566..299036) 1 NC_004547.2 Similar to Bacteriophage P1 death on curing protein Doc SWALL:DOC_BPP1 (SWALL:Q06259) (126 aa) fasta scores: E(): 1.5e-05, 37.61% id in 109 aa, and to Escherichia coli Doc protein Doc SWALL:Q47172 (EMBL:X98141) (126 aa) fasta scores: E(): 1.1e-05, 37.61% id in 109 aa; death on curing protein 299036 doc 2882284 doc Pectobacterium atrosepticum SCRI1043 death on curing protein YP_048380.1 298566 R 218491 CDS YP_048381.1 50119214 2882525 complement(299036..299440) 1 NC_004547.2 No significant database matches.; hypothetical protein 299440 2882525 ECA0254 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048381.1 299036 R 218491 CDS YP_048382.1 50119215 2882208 complement(299978..300274) 1 NC_004547.2 Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; DNA-binding protein Fis 300274 fis 2882208 fis Pectobacterium atrosepticum SCRI1043 DNA-binding protein Fis YP_048382.1 299978 R 218491 CDS YP_048383.1 50119216 2882630 complement(300298..301263) 1 NC_004547.2 Similar to Erwinia carotovora Yhdg homolog SWALL:O52539 (EMBL:AF040381) (321 aa) fasta scores: E(): 1.4e-125, 99.37% id in 321 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein Yhdg SWALL:YHDG_ECOLI (SWALL:P25717) (321 aa) fasta scores: E(): 1.6e-111, 87.53% id in 321 aa; tRNA-dihydrouridine synthase B 301263 2882630 ECA0256 Pectobacterium atrosepticum SCRI1043 tRNA-dihydrouridine synthase B YP_048383.1 300298 R 218491 CDS YP_048384.1 50119217 2881347 complement(301621..302355) 1 NC_004547.2 Similar to Erwinia carotovora carbonic anhydrase precursor Cah SWALL:CAH_ERWCA (SWALL:O52538) (244 aa) fasta scores: E(): 4.3e-93, 95.08% id in 244 aa, and to Neisseria gonorrhoeae carbonic anhydrase precursor Cah SWALL:CAH_NEIGO (SWALL:Q50940) (252 aa) fasta scores: E(): 3.7e-39, 44.44% id in 243 aa; carbonic anhydrase 302355 cah 2881347 cah Pectobacterium atrosepticum SCRI1043 carbonic anhydrase YP_048384.1 301621 R 218491 CDS YP_048385.1 50119218 2882450 complement(302533..303420) 1 NC_004547.2 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; 50S ribosomal protein L11 methyltransferase 303420 prmA 2882450 prmA Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L11 methyltransferase YP_048385.1 302533 R 218491 CDS YP_048386.1 50119219 2881849 complement(303438..304889) 1 NC_004547.2 mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; sodium/panthothenate symporter 304889 panF 2881849 panF Pectobacterium atrosepticum SCRI1043 sodium/panthothenate symporter YP_048386.1 303438 R 218491 CDS YP_048387.1 50119220 2885203 complement(305290..306633) 1 NC_004547.2 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxylase subunit 306633 accC 2885203 accC Pectobacterium atrosepticum SCRI1043 acetyl-CoA carboxylase biotin carboxylase subunit YP_048387.1 305290 R 218491 CDS YP_048388.1 50119221 2885202 complement(306645..307112) 1 NC_004547.2 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase biotin carboxyl carrier protein subunit 307112 accB 2885202 accB Pectobacterium atrosepticum SCRI1043 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit YP_048388.1 306645 R 218491 CDS YP_048389.1 50119222 2884123 complement(307137..307589) 1 NC_004547.2 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 307589 aroQ 2884123 aroQ Pectobacterium atrosepticum SCRI1043 3-dehydroquinate dehydratase YP_048389.1 307137 R 218491 CDS YP_048390.1 50119223 2882631 complement(307844..308443) 1 NC_004547.2 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; sulfite oxidase subunit YedZ 308443 2882631 ECA0263 Pectobacterium atrosepticum SCRI1043 sulfite oxidase subunit YedZ YP_048390.1 307844 R 218491 CDS YP_048391.1 50119224 2882632 complement(308480..309481) 1 NC_004547.2 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; sulfite oxidase activity not demonstrated; requires inner membrane anchor protein YedZ; sulfite oxidase subunit YedY 309481 2882632 ECA0264 Pectobacterium atrosepticum SCRI1043 sulfite oxidase subunit YedY YP_048391.1 308480 R 218491 CDS YP_048392.1 50119225 2882514 complement(309653..310630) 1 NC_004547.2 Similar to Yersinia pestis probable zinc-binding dehydrogenase ypo3663 SWALL:Q8ZAW8 (EMBL:AJ414158) (325 aa) fasta scores: E(): 2.4e-87, 71.6% id in 324 aa; zinc-binding oxidoreductase 310630 2882514 ECA0265 Pectobacterium atrosepticum SCRI1043 zinc-binding oxidoreductase YP_048392.1 309653 R 218491 CDS YP_048393.1 50119226 2882515 311016..312953 1 NC_004547.2 regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; regulatory protein CsrD 312953 2882515 ECA0266 Pectobacterium atrosepticum SCRI1043 regulatory protein CsrD YP_048393.1 311016 D 218491 CDS YP_048394.1 50119227 2882152 313270..314313 1 NC_004547.2 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 314313 mreB 2882152 mreB Pectobacterium atrosepticum SCRI1043 rod shape-determining protein MreB YP_048394.1 313270 D 218491 CDS YP_048395.1 50119228 2882153 314487..315470 1 NC_004547.2 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 315470 mreC 2882153 mreC Pectobacterium atrosepticum SCRI1043 rod shape-determining protein MreC YP_048395.1 314487 D 218491 CDS YP_048396.1 50119229 2882002 315467..315955 1 NC_004547.2 part of cell wall structural complex MreBCD; transmembrane component; rod shape-determining protein MreD 315955 mreD 2882002 mreD Pectobacterium atrosepticum SCRI1043 rod shape-determining protein MreD YP_048396.1 315467 D 218491 CDS YP_048397.1 50119230 2882516 315964..316557 1 NC_004547.2 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 316557 maf 2882516 maf Pectobacterium atrosepticum SCRI1043 Maf-like protein YP_048397.1 315964 D 218491 CDS YP_048398.1 50119231 2881346 316547..318016 1 NC_004547.2 involved in the processing of the 5'end of 16S rRNA; ribonuclease G 318016 cafA 2881346 cafA Pectobacterium atrosepticum SCRI1043 ribonuclease G YP_048398.1 316547 D 218491 CDS YP_048399.1 50119232 2882573 318058..321888 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo3670 SWALL:Q8ZAW2 (EMBL:AJ414158) (1307 aa) fasta scores: E(): 0, 56.76% id in 1300 aa, and to Escherichia coli O6 hypothetical protein YhdP SWALL:AAN82440 (EMBL:AE016767) (1266 aa) fasta scores: E(): 2e-213, 54.68% id in 1282 aa; hypothetical protein 321888 2882573 ECA0272 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048399.1 318058 D 218491 CDS YP_048400.1 50119233 2884277 321945..323390 1 NC_004547.2 responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA; protease TldD 323390 tldD 2884277 tldD Pectobacterium atrosepticum SCRI1043 protease TldD YP_048400.1 321945 D 218491 CDS YP_048401.1 50119234 2882574 complement(323494..324087) 1 NC_004547.2 Similar to Xanthomonas campestris hypothetical protein Xcc1623 SWALL:Q8PA66 (EMBL:AE012263) (199 aa) fasta scores: E(): 1.7e-15, 38.65% id in 194 aa. No other significant database matches; hypothetical protein 324087 2882574 ECA0274 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048401.1 323494 R 218491 CDS YP_048402.1 50119235 2882575 complement(324097..324435) 1 NC_004547.2 No significant database matches.; hypothetical protein 324435 2882575 ECA0275 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048402.1 324097 R 218491 CDS YP_048403.1 50119236 2884309 complement(324544..325479) 1 NC_004547.2 Similar to Serratia marcescens temperature-dependent regulator A TdrA SWALL:Q8VUI0 (EMBL:AB077386) (303 aa) fasta scores: E(): 1.9e-100, 82.5% id in 303 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical transcriptional regulator yhcs or b3243 or c3998 or z4602 or ecs4116 SWALL:YHCS_ECOLI (SWALL:P45691) (309 aa) fasta scores: E(): 2.1e-97, 80.06% id in 311 aa; DNA-binding transcriptional regulator 325479 tdrA 2884309 tdrA Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional regulator YP_048403.1 324544 R 218491 CDS YP_048404.1 50119237 2882517 326099..326302 1 NC_004547.2 membrane protein AaeX; the gene is a member of the aaeXAB operon; hypothetical protein 326302 2882517 ECA0277 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048404.1 326099 D 218491 CDS YP_048405.1 50119238 2882518 326310..327275 1 NC_004547.2 with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid, 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; p-hydroxybenzoic acid efflux subunit AaeA 327275 2882518 ECA0278 Pectobacterium atrosepticum SCRI1043 p-hydroxybenzoic acid efflux subunit AaeA YP_048405.1 326310 D 218491 CDS YP_048406.1 50119239 2882519 327287..329275 1 NC_004547.2 with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; p-hydroxybenzoic acid efflux subunit AaeB 329275 2882519 ECA0279 Pectobacterium atrosepticum SCRI1043 p-hydroxybenzoic acid efflux subunit AaeB YP_048406.1 327287 D 218491 CDS YP_048407.1 50119240 2882579 329415..330869 1 NC_004547.2 Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD or b2661 SWALL:GABD_ECOLI (SWALL:P25526) (482 aa) fasta scores: E(): 8.3e-102, 55.41% id in 480 aa, and to Photorhabdus luminescens Orf17 SWALL:AAO17183 (EMBL:AF346500) (490 aa) fasta scores: E(): 6e-104, 57.74% id in 478 aa; succinate-semialdehyde dehydrogenase 330869 2882579 ECA0280 Pectobacterium atrosepticum SCRI1043 succinate-semialdehyde dehydrogenase YP_048407.1 329415 D 218491 CDS YP_048408.1 50119241 2882580 complement(330968..331519) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo3691 SWALL:Q8ZAU5 (EMBL:AJ414158) (182 aa) fasta scores: E(): 5.9e-48, 80.55% id in 180 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein Yjga SWALL:YJGA_ECOLI (SWALL:P26650) (183 aa) fasta scores: E(): 6.6e-46, 77.77% id in 180 aa.; hypothetical protein 331519 2882580 ECA0281 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048408.1 330968 R 218491 CDS YP_048409.1 50119242 2883469 331816..333156 1 NC_004547.2 protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD; peptidase PmbA 333156 pmbA 2883469 pmbA Pectobacterium atrosepticum SCRI1043 peptidase PmbA YP_048409.1 331816 D 218491 CDS YP_048410.1 50119243 2885032 complement(333228..333638) 1 NC_004547.2 Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; nucleoside diphosphate kinase regulator 333638 rnk 2885032 rnk Pectobacterium atrosepticum SCRI1043 nucleoside diphosphate kinase regulator YP_048410.1 333228 R 218491 CDS YP_048411.1 50119244 2882074 complement(333803..334075) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri phosphocarrier protein PtsO or Npr or RpoR or b3206 or c3966 or z4569 or ecs4085 or sf3246 SWALL:PTSO_ECOLI (SWALL:P33996) (90 aa) fasta scores: E(): 5.4e-26, 83.33% id in 90 aa; phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) 334075 ptsO 2882074 ptsO Pectobacterium atrosepticum SCRI1043 phosphohistidinoprotein-hexose phosphotransferase component of N-regulated PTS system (Npr) YP_048411.1 333803 R 218491 CDS YP_048412.1 50119245 2882581 complement(334107..334964) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3586SWALL:AAM83752 (EMBL:AJ414157) (284 aa) fasta scores: E(): 2.9e-105, 96.46% id in 283 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein Yhbj SWALL:YHBJ_ECOLI (SWALL:P33995) (284 aa) fasta scores: E(): 9.3e-105, 95.42% id in 284 aa; hypothetical protein 334964 2882581 ECA0285 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048412.1 334107 R 218491 CDS YP_048413.1 50119246 2882073 complement(335126..335599) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri nitrogen regulatory IIA protein PtsN or RpoP SWALL:PTSN_ECOLI (SWALL:P31222) (163 aa) fasta scores: E(): 1.3e-46, 80.12% id in 156 aa, and to Yersinia pestis phosphotransferase system enzyme IIA PtsN SWALL:AAM83751 (EMBL:AE013615) (164 aa) fasta scores: E(): 6.1e-48, 81.01% id in 158 aa; PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN 335599 ptsN 2882073 ptsN Pectobacterium atrosepticum SCRI1043 PTS system transporter subunit IIA-like nitrogen-regulatory protein PtsN YP_048413.1 335126 R 218491 CDS YP_048414.1 50119247 2882585 complement(335696..335983) 1 NC_004547.2 YhbH; resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase; binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization); seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing; sigma(54) modulation protein 335983 2882585 ECA0287 Pectobacterium atrosepticum SCRI1043 sigma(54) modulation protein YP_048414.1 335696 R 218491 CDS YP_048415.1 50119248 2884485 complement(336007..337440) 1 NC_004547.2 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 337440 rpoN 2884485 rpoN Pectobacterium atrosepticum SCRI1043 RNA polymerase factor sigma-54 YP_048415.1 336007 R 218491 CDS YP_048416.1 50119249 2882586 complement(337490..338215) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri probable ABC transporter ATP-binding protein YhbG SWALL:AAN44707 (EMBL:D12938) (241 aa) fasta scores: E(): 2.5e-76, 90.87% id in 241 aa, and to Salmonella typhimurium, and Salmonella typhi ABC superfamily Yhbg SWALL:Q8XFR6 (EMBL:AE008852) (241 aa) fasta scores: E(): 1.1e-75, 90.04% id in 241 aa; ABC transporter ATP-binding protein 338215 2882586 ECA0289 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_048416.1 337490 R 218491 CDS YP_048417.1 50119250 2882587 complement(338219..338791) 1 NC_004547.2 LptA; periplasmic binding protein part of a ABC superfamily of uptake transporters; interacts with LptB protein, the ATP binding component of the uptake system; lipopolysaccharide transport periplasmic protein LptA 338791 2882587 ECA0290 Pectobacterium atrosepticum SCRI1043 lipopolysaccharide transport periplasmic protein LptA YP_048417.1 338219 R 218491 CDS YP_048418.1 50119251 2881381 complement(338772..339338) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi inner membrane protein YrbK SWALL:Q8XGY6 (EMBL:AE008852) (191 aa) fasta scores: E(): 6e-45, 64.21% id in 190 aa; hypothetical protein 339338 2881381 ECA0291 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048418.1 338772 R 218491 CDS YP_048419.1 50119252 2881382 complement(339335..339901) 1 NC_004547.2 forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 339901 2881382 ECA0292 Pectobacterium atrosepticum SCRI1043 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_048419.1 339335 R 218491 CDS YP_048420.1 50119253 2881383 complement(339921..340994) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3577 SWALL:Q8ZB48 (EMBL:AJ414157) (328 aa) fasta scores: E(): 2e-101, 81.59% id in 326 aa, and to Escherichia coli hypothetical protein Yrbh SWALL:YRBH_ECOLI (SWALL:P45395) (328 aa) fasta scores: E(): 2e-95, 78.08% id in 324 aa; D-arabinose 5-phosphate isomerase 340994 2881383 ECA0293 Pectobacterium atrosepticum SCRI1043 D-arabinose 5-phosphate isomerase YP_048420.1 339921 R 218491 CDS YP_048421.1 50119254 2881547 complement(341009..341977) 1 NC_004547.2 YrbG; inner membrane protein involved in cell envelope integrity; sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers; calcium/sodium:proton antiporter 341977 2881547 ECA0294 Pectobacterium atrosepticum SCRI1043 calcium/sodium:proton antiporter YP_048421.1 341009 R 218491 CDS YP_048422.1 50119255 2881548 342391..343203 1 NC_004547.2 ATP-binding subunit of a ABC toluene efflux transporter; ABC transporter ATP-binding protein 343203 2881548 ECA0295 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_048422.1 342391 D 218491 CDS YP_048423.1 50119256 2881549 343211..343993 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo3574 SWALL:Q8ZB51 (EMBL:AJ414157) (260 aa) fasta scores: E(): 1.8e-88, 88.84% id in 260 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein YrbE SWALL:AAN44700 (EMBL:U18997) (260 aa) fasta scores: E(): 2.7e-84, 85.38% id in 260 aa; hypothetical protein 343993 2881549 ECA0296 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048423.1 343211 D 218491 CDS YP_048424.1 50119257 2882699 343998..344564 1 NC_004547.2 Similar to Shigella flexneri VpsC SWALL:Q9RHA1 (EMBL:AF053073) (183 aa) fasta scores: E(): 5.2e-45, 68.64% id in 185 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein yrbd precursor yrbd or b3193 or z4556 or ecs4072 SWALL:YRBD_ECOLI (SWALL:P45391) (183 aa) fasta scores: E(): 1.1e-45, 69.18% id in 185 aa. Shigella flexneri VpsC protein is involved in virulence protein secretion; hypothetical protein 344564 vpsC 2882699 vpsC Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048424.1 343998 D 218491 CDS YP_048425.1 50119258 2882570 344577..345206 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri protein yrbc precursor yrbc or b3192 or sf3232 SWALL:AAN44698 (EMBL:U18997) (211 aa) fasta scores: E(): 1e-62, 76.77% id in 211 aa, and to Shigella flexneri YrbC SWALL:AAF21249 (EMBL:AF053073) (211 aa) fasta scores: E(): 1e-62, 76.77% id in 211 aa; hypothetical protein 345206 2882570 ECA0298 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048425.1 344577 D 218491 CDS YP_048426.1 50119259 2882571 345220..345510 1 NC_004547.2 Similar to Yersinia pestis anti-sigma B factor antagonist ypo3571 SWALL:Q8ZB54 (EMBL:AJ414157) (100 aa) fasta scores: E(): 3.9e-18, 60.41% id in 96 aa, and to Escherichia coli, and Shigella flexneri hypothetical protein yrbb yrbb or b3191 or sf3231 SWALL:YRBB_ECOLI (SWALL:P45389) (97 aa) fasta scores: E(): 4.6e-11, 40.62% id in 96 aa; hypothetical protein 345510 2882571 ECA0299 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048426.1 345220 D 218491 CDS YP_048427.1 50119260 2882572 345645..345899 1 NC_004547.2 Similar to Yersinia pestis bolA-like protein ypo3570 SWALL:AAM83735 (EMBL:AJ414157) (87 aa) fasta scores: E(): 9.3e-29, 88.09% id in 84 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri protein YrbA SWALL:YRBA_ECOLI (SWALL:P43781) (84 aa) fasta scores: E(): 2.9e-27, 84.52% id in 84 aa; bolA family protein 345899 2882572 ECA0300 Pectobacterium atrosepticum SCRI1043 bolA family protein YP_048427.1 345645 D 218491 CDS YP_048428.1 50119261 2881704 345980..347242 1 NC_004547.2 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 347242 murA 2881704 murA Pectobacterium atrosepticum SCRI1043 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_048428.1 345980 D 218491 CDS YP_048429.1 50119262 2884023 complement(347351..348448) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 protease DegS precursor DegS or HhoB or HtrH or b3235 or z4594 or ecs4108 SWALL:DEGS_ECOLI (SWALL:P31137) (355 aa) fasta scores: E(): 9.1e-73, 58.51% id in 364 aa; serine endoprotease 348448 degS 2884023 degS Pectobacterium atrosepticum SCRI1043 serine endoprotease YP_048429.1 347351 R 218491 CDS YP_048430.1 50119263 2884022 complement(348586..349956) 1 NC_004547.2 Similar to Escherichia coli protease degq precursor degq or hhoa or b3234 SWALL:DEGQ_ECOLI (SWALL:P39099) (455 aa) fasta scores: E(): 9.7e-110, 70.67% id in 457 aa; exported protease 349956 degQ 2884022 degQ Pectobacterium atrosepticum SCRI1043 exported protease YP_048430.1 348586 R 218491 CDS YP_048431.1 50119264 2882606 complement(350194..350598) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo3565 SWALL:AAM83730 (EMBL:AJ414157) (134 aa) fasta scores: E(): 1.5e-41, 87.97% id in 133 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein YhcB SWALL:YHCB_ECOLI (SWALL:P39436) (134 aa) fasta scores: E(): 5.6e-34, 80.31% id in 127 aa; cytochrome d ubiquinol oxidase subunit III 350598 2882606 ECA0304 Pectobacterium atrosepticum SCRI1043 cytochrome d ubiquinol oxidase subunit III YP_048431.1 350194 R 218491 CDS YP_048432.1 50119265 2882607 350815..351966 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo3564 SWALL:Q8ZB60 (EMBL:AJ414157) (375 aa) fasta scores: E(): 8.3e-107, 71.88% id in 377 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein Yhcm SWALL:YHCM_ECOLI (SWALL:P46442) (375 aa) fasta scores: E(): 1.6e-98, 65.6% id in 378 aa, and to Salmonella typhi ATP/GTP-binding protein sty3526 SWALL:Q8Z3E8 (EMBL:AL627278) (374 aa) fasta scores: E(): 3e-97, 63.9% id in 374 aa; ATP/GTP-binding protein 351966 2882607 ECA0305 Pectobacterium atrosepticum SCRI1043 ATP/GTP-binding protein YP_048432.1 350815 D 218491 CDS YP_048433.1 50119266 2883929 352201..352629 1 NC_004547.2 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 352629 rplM 2883929 rplM Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L13 YP_048433.1 352201 D 218491 CDS YP_048434.1 50119267 2884473 352645..353037 1 NC_004547.2 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 353037 rpsI 2884473 rpsI Pectobacterium atrosepticum SCRI1043 30S ribosomal protein S9 YP_048434.1 352645 D 218491 CDS YP_048435.1 50119268 2884348 353367..354008 1 NC_004547.2 transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation; stringent starvation protein A 354008 sspA 2884348 sspA Pectobacterium atrosepticum SCRI1043 stringent starvation protein A YP_048435.1 353367 D 218491 CDS YP_048436.1 50119269 2884349 354014..354517 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 stringent starvation protein B SspB or b3228 or z4586 or ecs4101 SWALL:SSPB_ECOLI (SWALL:P25663) (165 aa) fasta scores: E(): 3e-39, 71.42% id in 168 aa; ClpXP protease specificity-enhancing factor 354517 sspB 2884349 sspB Pectobacterium atrosepticum SCRI1043 ClpXP protease specificity-enhancing factor YP_048436.1 354014 D 218491 CDS YP_048437.1 50119270 2881861 complement(354581..355354) 1 NC_004547.2 Similar to Klebsiella terrigena acetoin reductase BudC SWALL:BUDC_KLETE (SWALL:Q04520) (241 aa) fasta scores: E(): 1.3e-51, 69.06% id in 236 aa, and to Klebsiella pneumoniae acetoin reductase BudC SWALL:BUDC_KLEPN (SWALL:Q48436) (256 aa) fasta scores: E(): 1.8e-73, 82.28% id in 254 aa; acetoin reductase 355354 budC 2881861 budC Pectobacterium atrosepticum SCRI1043 acetoin reductase YP_048437.1 354581 R 218491 CDS YP_048438.1 50119271 2882036 complement(355618..357036) 1 NC_004547.2 glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; glutamate synthase subunit beta 357036 gltD 2882036 gltD Pectobacterium atrosepticum SCRI1043 glutamate synthase subunit beta YP_048438.1 355618 R 218491 CDS YP_048439.2 161501884 2881965 complement(357046..361506) 1 NC_004547.2 catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; glutamate synthase subunit alpha 361506 gltB 2881965 gltB Pectobacterium atrosepticum SCRI1043 glutamate synthase subunit alpha YP_048439.2 357046 R 218491 CDS YP_048440.1 50119273 2882608 362158..363087 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YhcC SWALL:YHCC_ECOLI (SWALL:P45476) (309 aa) fasta scores: E(): 2.4e-105, 82.23% id in 304 aa; hypothetical protein 363087 2882608 ECA0313 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048440.1 362158 D 218491 CDS YP_048441.1 50119274 2884146 363219..365588 1 NC_004547.2 sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon; hybrid sensory histidine kinase in two-component regulatory system with ArcA; aerobic respiration control sensor protein ArcB 365588 arcB 2884146 arcB Pectobacterium atrosepticum SCRI1043 aerobic respiration control sensor protein ArcB YP_048441.1 363219 D 218491 CDS YP_048442.1 50119275 2885320 complement(365700..365939) 1 NC_004547.2 No significant database matches.; lipoprotein 365939 2885320 ECA0315 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_048442.1 365700 R 218491 CDS YP_048443.1 50119276 2885207 366062..366715 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri enhancing lycopene biosynthesis protein 2 ElbB or Elb2 or b3209 or sf3249 SWALL:ELBB_ECOLI (SWALL:P26428) (217 aa) fasta scores: E(): 1.6e-57, 68.2% id in 217 aa; isoprenoid biosynthesis protein with amidotransferase-like domain 366715 elbB 2885207 elbB Pectobacterium atrosepticum SCRI1043 isoprenoid biosynthesis protein with amidotransferase-like domain YP_048443.1 366062 D 218491 CDS YP_048444.1 50119277 2881211 366712..367449 1 NC_004547.2 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; monofunctional biosynthetic peptidoglycan transglycosylase 367449 mtgA 2881211 mtgA Pectobacterium atrosepticum SCRI1043 monofunctional biosynthetic peptidoglycan transglycosylase YP_048444.1 366712 D 218491 CDS YP_048445.1 50119278 2885321 367521..368813 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo3473 SWALL:Q8ZBE3 (EMBL:AJ414157) (408 aa) fasta scores: E(): 3.4e-43, 35.81% id in 363 aa, and to Yersinia pestis hypothetical protein ypo3468 SWALL:AAM84304 (EMBL:AJ414157) (388 aa) fasta scores: E(): 7.9e-44, 37.78% id in 397 aa; hypothetical protein 368813 2885321 ECA0318 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048445.1 367521 D 218491 CDS YP_048446.1 50119279 2885322 complement(368956..369528) 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo3551 SWALL:Q8ZB73 (EMBL:AJ414157) (191 aa) fasta scores: E(): 2.2e-47, 73.82% id in 191 aa, and to Escherichia coli lipoprotein EcfH SWALL:AAL01382 (EMBL:AF407015) (191 aa) fasta scores: E(): 5.6e-46, 71.72% id in 191 aa; hypothetical protein 369528 2885322 ECA0319 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048446.1 368956 R 218491 CDS YP_048447.1 50119280 2885369 complement(369540..370130) 1 NC_004547.2 Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein; DnaA initiator-associating protein DiaA 370130 2885369 ECA0320 Pectobacterium atrosepticum SCRI1043 DnaA initiator-associating protein DiaA YP_048447.1 369540 R 218491 CDS YP_048448.1 50119281 2885370 complement(370172..370414) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3549 or y0119 SWALL:YZ49_YERPE (SWALL:Q8ZB75) (117 aa) fasta scores: E(): 9.5e-22, 76.31% id in 76 aa, and to Salmonella typhimurium hypothetical protein yran or stm3265 SWALL:YRAN_SALTY (SWALL:Q8ZLU3) (131 aa) fasta scores: E(): 1.6e-17, 61.84% id in 76 aa; hypothetical protein 370414 2885370 ECA0321 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048448.1 370172 R 218491 CDS YP_048449.1 50119282 2885371 complement(370525..372543) 1 NC_004547.2 Similar to Shigella flexneri glycosylase Yram or sf3188 SWALL:AAN44655 (EMBL:AE015330) (688 aa) fasta scores: E(): 5.9e-116, 52.47% id in 686 aa, and to Yersinia pestis glycosylase y0118 SWALL:AAM83712 (EMBL:AE013612) (689 aa) fasta scores: E(): 4.8e-55, 59.61% id in 676 aa; hypothetical protein 372543 2885371 ECA0322 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048449.1 370525 R 218491 CDS YP_048450.1 50119283 2885345 372605..373492 1 NC_004547.2 Similar to Yersinia pestis tetrapyrrole methylase ypo3547 SWALL:AAM83711 (EMBL:AJ414157) (299 aa) fasta scores: E(): 2.8e-92, 84.12% id in 296 aa, and to Escherichia coli O6 hypothetical protein Yral SWALL:AAN82340 (EMBL:AE016767) (287 aa) fasta scores: E(): 2.4e-90, 83.27% id in 287 aa; tetrapyrrole methylase 373492 2885345 ECA0323 Pectobacterium atrosepticum SCRI1043 tetrapyrrole methylase YP_048450.1 372605 D 218491 CDS YP_048451.1 50119284 2885346 374208..374462 1 NC_004547.2 Similar to Erwinia pyrifoliae plasmid stability protein StbD stbD SWALL:AAN04532 (EMBL:AY123045) (84 aa) fasta scores: E(): 8.7e-27, 88.09% id in 84 aa, and to Morganella morganii stability protein StbD SWALL:Q9ZH43 (EMBL:AF072126) (83 aa) fasta scores: E(): 9.5e-18, 63.95% id in 86 aaand to Escherichia coli IncF plasmid RepFIB replicon SWALL:Q60256 (EMBL:M26308) (83 aa) fasta scores: E(): 7.6e-10, 43.59% id in 78 aa; plasmid stability protein 374462 2885346 ECA0325 Pectobacterium atrosepticum SCRI1043 plasmid stability protein YP_048451.1 374208 D 218491 CDS YP_048452.1 50119285 2885347 374452..374739 1 NC_004547.2 Similar to Erwinia pyrifoliae plasmid stability protein StbE SWALL:AAN04531 (EMBL:AY123045) (95 aa) fasta scores: E(): 1.7e-31, 90.32% id in 93 aa, and to Morganella morganii stability protein StbE SWALL:Q9ZH42 (EMBL:AF072126) (93 aa) fasta scores: E(): 1.3e-19, 62.06% id in 87 aa, and to Escherichia coli, and Shigella flexneri hypothetical RelE protein SWALL:RELE_ECOLI (SWALL:P07008) (95 aa) fasta scores: E(): 2.5e-15, 53.76% id in 93 aa; plasmid stability protein 374739 2885347 ECA0326 Pectobacterium atrosepticum SCRI1043 plasmid stability protein YP_048452.1 374452 D 218491 CDS YP_048453.1 50119286 2885376 374918..375703 1 NC_004547.2 seems to be involved in biofilm formation; in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine; hypothetical protein 375703 2885376 ECA0327 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048453.1 374918 D 218491 CDS YP_048454.1 50119287 2885377 complement(375772..376932) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo0660 SWALL:Q8ZI54 (EMBL:AJ414144) (386 aa) fasta scores: E(): 1e-145, 87.27% id in 385 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein YgiC SWALL:YGIC_ECOLI (SWALL:P24196) (386 aa) fasta scores: E(): 1.4e-133, 78.49% id in 386 aa.; glutathionylspermidine synthase 376932 2885377 ECA0328 Pectobacterium atrosepticum SCRI1043 glutathionylspermidine synthase YP_048454.1 375772 R 218491 CDS YP_048455.1 50119288 2885378 complement(376944..377618) 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo0661 or y3517 SWALL:Q8ZI53 (EMBL:AJ414144) (228 aa) fasta scores: E(): 2.1e-59, 77.68% id in 233 aa, and to Salmonella typhimurium, and Salmonella typhi inner membrane protein ygib or stm3187 or sty3365 SWALL:Q8XGZ1 (EMBL:AE008846) (223 aa) fasta scores: E(): 3.8e-57, 74.56% id in 228 aa; hypothetical protein 377618 2885378 ECA0329 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048455.1 376944 R 218491 CDS YP_048456.2 161501883 2884268 complement(377889..379283) 1 NC_004547.2 trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell; outer membrane channel protein 379283 tolC 2884268 tolC Pectobacterium atrosepticum SCRI1043 outer membrane channel protein YP_048456.2 377889 R 218491 CDS YP_048457.1 50119290 2884619 379620..380252 1 NC_004547.2 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose pyrophosphatase 380252 nudF 2884619 nudF Pectobacterium atrosepticum SCRI1043 ADP-ribose pyrophosphatase YP_048457.1 379620 D 218491 CDS YP_048458.1 50119291 2882665 380254..380688 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein YqiB SWALL:AAN44551 (EMBL:D16557) (140 aa) fasta scores: E(): 1.6e-47, 80% id in 140 aa.; hypothetical protein 380688 2882665 ECA0332 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048458.1 380254 D 218491 CDS YP_048459.1 50119292 2882856 380920..381747 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 Icc protein Icc or b3032 or z4389 or ecs3920 SWALL:ICC_ECOLI (SWALL:P36650) (275 aa) fasta scores: E(): 2.1e-82, 70.54% id in 275 aa, and to Yersinia pestis Icc protein homologue Icc or ypo0666 SWALL:Q8ZI48 (EMBL:AJ414144) (275 aa) fasta scores: E(): 4.8e-92, 76.72% id in 275 aa; cyclic 3',5'-adenosine monophosphate phosphodiesterase 381747 icc 2882856 icc Pectobacterium atrosepticum SCRI1043 cyclic 3',5'-adenosine monophosphate phosphodiesterase YP_048459.1 380920 D 218491 CDS YP_048460.1 50119293 2882666 381747..382328 1 NC_004547.2 Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; esterase 382328 2882666 ECA0334 Pectobacterium atrosepticum SCRI1043 esterase YP_048460.1 381747 D 218491 CDS YP_048461.1 50119294 2881414 382412..384307 1 NC_004547.2 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit B 384307 parE 2881414 parE Pectobacterium atrosepticum SCRI1043 DNA topoisomerase IV subunit B YP_048461.1 382412 D 218491 CDS YP_048462.1 50119295 2882667 384350..385246 1 NC_004547.2 Similar to Neisseria meningitidis CrgA SWALL:Q9JPU9 (EMBL:AF190471) (299 aa) fasta scores: E(): 4.9e-49, 45.27% id in 296 aa, and to Yersinia pestis LysR-family regulatory protein ypo0669 or y3510 SWALL:Q8ZI45 (EMBL:AJ414144) (303 aa) fasta scores: E(): 1.4e-70, 65.18% id in 293 aa; LysR family transcriptional regulator 385246 2882667 ECA0336 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_048462.1 384350 D 218491 CDS YP_048463.1 50119296 2881440 complement(385287..385868) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 modulator of drug activity B MdaB or mda66 or b3028 or c3768 or z4379 or ecs3910 SWALL:MDAB_ECOLI (SWALL:P40717) (193 aa) fasta scores: E(): 8.6e-61, 70.83% id in 192 aa, and to Yersinia pestis modulator of drug activity MdaB or ypo0670 or y3509 SWALL:Q8ZI44 (EMBL:AJ414144) (194 aa) fasta scores: E(): 2.1e-61, 74.46% id in 188 aa; modulator of drug activity B 385868 mdaB 2881440 mdaB Pectobacterium atrosepticum SCRI1043 modulator of drug activity B YP_048463.1 385287 R 218491 CDS YP_048464.1 50119297 2885161 complement(386071..386934) 1 NC_004547.2 Similar to Lactobacillus casei D-fructose-1,6-biphosphate aldolase sorG SWALL:Q9RGG1 (EMBL:AF129168) (276 aa) fasta scores: E(): 1.9e-37, 41.97% id in 274 aa, and to Escherichia coli O6 aldolase c4483 SWALL:AAN82919 (EMBL:AE016769) (286 aa) fasta scores: E(): 8.4e-89, 80.06% id in 286 aa; hypothetical protein 386934 2885161 ECA0338 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048464.1 386071 R 218491 CDS YP_048465.1 50119298 2885162 complement(387024..387875) 1 NC_004547.2 Similar to Escherichia coli tagatose-1,6-bisphosphate aldolase GatY or b2096 SWALL:GATY_ECOLI (SWALL:P37192) (284 aa) fasta scores: E(): 1.8e-26, 36.36% id in 286 aa, and to Escherichia coli O6 aldolase c4484 SWALL:AAN82920 (EMBL:AE016769) (283 aa) fasta scores: E(): 7.5e-58, 59.01% id in 283 aa; sugar-bisphosphate aldolase 387875 2885162 ECA0339 Pectobacterium atrosepticum SCRI1043 sugar-bisphosphate aldolase YP_048465.1 387024 R 218491 CDS YP_048466.1 50119299 2885163 complement(387887..388978) 1 NC_004547.2 Similar to Escherichia coli O6 PTS enzyme-II fructose c4485 SWALL:AAN82921 (EMBL:AE016769) (363 aa) fasta scores: E(): 4.2e-116, 84.29% id in 363 aa, and to Listeria innocua hypothetical protein Lin2240 SWALL:Q929N4 (EMBL:AL596171) (363 aa) fasta scores: E(): 5.9e-68, 51.82% id in 357 aa; PTS system transporter subunit IIBC 388978 2885163 ECA0340 Pectobacterium atrosepticum SCRI1043 PTS system transporter subunit IIBC YP_048466.1 387887 R 218491 CDS YP_048467.1 50119300 2885177 complement(389004..389318) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri PTS system, fructose-like-2 IIb component 1 frwb or b3950 or c4908 or z5506 or ecs4879 or sf4027 SWALL:PTWB_ECOLI (SWALL:P32673) (106 aa) fasta scores: E(): 8.5e-14, 50% id in 100 aa, and to Escherichia coli O6 pts system, fructose-like-2 IIb component 1 c4486 SWALL:AAN82922 (EMBL:AE016769) (104 aa) fasta scores: E(): 2.1e-27, 80.19% id in 101 aa; PTS system transporter subunit IIB 389318 2885177 ECA0341 Pectobacterium atrosepticum SCRI1043 PTS system transporter subunit IIB YP_048467.1 389004 R 218491 CDS YP_048468.1 50119301 2885178 complement(389332..389811) 1 NC_004547.2 Similar to Escherichia coli O6 phosphotransferase system c4487 SWALL:AAN82923 (EMBL:AE016769) (156 aa) fasta scores: E(): 1.7e-44, 79.73% id in 153 aa, and to Listeria monocytogenes hypothetical protein Lmo2137 lmo2137 SWALL:Q8Y5C8 (EMBL:AL591982) (157 aa) fasta scores: E(): 2.2e-23, 48.99% id in 149 aa; PTS system transporter subunit EIIA 389811 2885178 ECA0342 Pectobacterium atrosepticum SCRI1043 PTS system transporter subunit EIIA YP_048468.1 389332 R 218491 CDS YP_048469.1 50119302 2885179 complement(389860..391410) 1 NC_004547.2 Similar to Escherichia coli O6 transcriptional antiterminator c4488 SWALL:AAN82924 (EMBL:AE016769) (532 aa) fasta scores: E(): 1.5e-115, 59.37% id in 512 aa, and to Bacillus stearothermophilus MtlR protein SWALL:Q45419 (EMBL:U18943) (697 aa) fasta scores: E(): 3.1e-30, 25% id in 508 aa; PTS system regulatory protein 391410 2885179 ECA0343 Pectobacterium atrosepticum SCRI1043 PTS system regulatory protein YP_048469.1 389860 R 218491 CDS YP_048470.1 50119303 2884573 391922..392257 1 NC_004547.2 No significant database matches.; hypothetical protein 392257 2884573 ECA0344 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048470.1 391922 D 218491 CDS YP_048471.1 50119304 2881413 392535..394805 1 NC_004547.2 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; DNA topoisomerase IV subunit A 394805 parC 2881413 parC Pectobacterium atrosepticum SCRI1043 DNA topoisomerase IV subunit A YP_048471.1 392535 D 218491 CDS YP_048472.1 50119305 2883467 394956..395693 1 NC_004547.2 Similar to Escherichia coli 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC or ParF or b3018 SWALL:PLSC_ECOLI (SWALL:P26647) (245 aa) fasta scores: E(): 2e-77, 75.41% id in 244 aa; 1-acyl-sn-glycerol-3-phosphate acyltransferase 395693 plsC 2883467 plsC Pectobacterium atrosepticum SCRI1043 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_048472.1 394956 D 218491 CDS YP_048473.1 50119306 2884334 395766..397181 1 NC_004547.2 Similar to Escherichia coli protein sufi precursor SufI or b3017 SWALL:SUFI_ECOLI (SWALL:P26648) (470 aa) fasta scores: E(): 2.8e-137, 70.87% id in 467 aa, and to Yersinia pestis cell division protein SufI or ypo0673 or y3504 SWALL:Q8ZI41 (EMBL:AJ414144) (474 aa) fasta scores: E(): 1.9e-150, 77.91% id in 471 aa; repressor protein for FtsI 397181 sufI 2884334 sufI Pectobacterium atrosepticum SCRI1043 repressor protein for FtsI YP_048473.1 395766 D 218491 CDS YP_048474.1 50119307 2884574 397546..398283 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical transcriptional regulator YegW SWALL:YEGW_ECOLI (SWALL:P76420) (248 aa) fasta scores: E(): 3.2e-22, 30.8% id in 237 aa; GntR family transcriptional regulator 398283 2884574 ECA0348 Pectobacterium atrosepticum SCRI1043 GntR family transcriptional regulator YP_048474.1 397546 D 218491 CDS YP_048475.1 50119308 2883259 complement(398326..399153) 1 NC_004547.2 methylglyoxal reductase/#-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate; 2,5-diketo-D-gluconate reductase A 399153 dkgA 2883259 dkgA Pectobacterium atrosepticum SCRI1043 2,5-diketo-D-gluconate reductase A YP_048475.1 398326 R 218491 CDS YP_048476.1 50119309 2884575 complement(399423..400586) 1 NC_004547.2 Similar to Yersinia pestis iron-containing alcohol dehydrogenase ypo0678 SWALL:Q8ZI38 (EMBL:AJ414144) (385 aa) fasta scores: E(): 3.8e-112, 76.94% id in 386 aa, and to Escherichia coli hypothetical oxidoreductase YqhD SWALL:YQHD_ECOLI (SWALL:Q46856) (387 aa) fasta scores: E(): 3e-108, 73.64% id in 387 aa; iron-containing alcohol dehydrogenase 400586 2884575 ECA0350 Pectobacterium atrosepticum SCRI1043 iron-containing alcohol dehydrogenase YP_048476.1 399423 R 218491 CDS YP_048477.1 50119310 2884700 complement(400590..401330) 1 NC_004547.2 Similar to Bacillus subtilis nitro/flavin reductase NfrA or NfrA1 or Ipa-43D SWALL:NFRA_BACSU (SWALL:P39605) (249 aa) fasta scores: E(): 5.2e-19, 29.83% id in 248 aa, and to Clostridium acetobutylicum ortholog ycnd b.subtilis, nitroreductase cac0718 SWALL:Q97L47 (EMBL:AE007587) (246 aa) fasta scores: E(): 1.2e-42, 45.49% id in 244 aa; nitroreductase 401330 2884700 ECA0351 Pectobacterium atrosepticum SCRI1043 nitroreductase YP_048477.1 400590 R 218491 CDS YP_048478.1 50119311 2884701 401582..402547 1 NC_004547.2 Similar to Yersinia pestis AraC-family regulatory protein ypo0679 SWALL:AAM87046 (EMBL:AJ414144) (297 aa) fasta scores: E(): 3.2e-77, 66.21% id in 296 aa, and to Escherichia coli hypothetical transcriptional regulator YqhC SWALL:YQHC_ECOLI (SWALL:Q46855) (318 aa) fasta scores: E(): 1.2e-66, 57.77% id in 296 aa; AraC family transcriptional regulator 402547 2884701 ECA0352 Pectobacterium atrosepticum SCRI1043 AraC family transcriptional regulator YP_048478.1 401582 D 218491 CDS YP_048479.1 50119312 2884702 complement(402577..403236) 1 NC_004547.2 Similar to Yersinia pestis DedA-family membrane protein ypo0680 SWALL:Q8ZI36 (EMBL:AJ414144) (220 aa) fasta scores: E(): 1.6e-66, 75.11% id in 217 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein YghB SWALL:YGHB_ECOLI (SWALL:P33196) (219 aa) fasta scores: E(): 1e-60, 69.3% id in 215 aa; DedA family membrane protein 403236 2884702 ECA0353 Pectobacterium atrosepticum SCRI1043 DedA family membrane protein YP_048479.1 402577 R 218491 CDS YP_048480.1 50119313 2883959 complement(403671..404861) 1 NC_004547.2 catalyzes the formation of L-homocysteine from cystathionine; cystathionine beta-lyase 404861 metC 2883959 metC Pectobacterium atrosepticum SCRI1043 cystathionine beta-lyase YP_048480.1 403671 R 218491 CDS YP_048481.1 50119314 2884694 complement(405197..406489) 1 NC_004547.2 Similar to Yersinia pestis c4-dicarboxylate transporter, large subunit ypo1577 SWALL:AAM86142 (EMBL:AJ414149) (430 aa) fasta scores: E(): 2.6e-146, 92.09% id in 430 aa; DedA family membrane protein 406489 2884694 ECA0355 Pectobacterium atrosepticum SCRI1043 DedA family membrane protein YP_048481.1 405197 R 218491 CDS YP_048482.1 50119315 2884695 complement(406505..407011) 1 NC_004547.2 Similar to Yersinia pestis C4-dicarboxylate transporter, small subunit ypo1578 SWALL:Q8ZFV0 (EMBL:AJ414149) (168 aa) fasta scores: E(): 5.2e-51, 70.83% id in 168 aa; hypothetical protein 407011 2884695 ECA0356 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048482.1 406505 R 218491 CDS YP_048483.1 50119316 2884696 complement(407348..408325) 1 NC_004547.2 Similar to Rhodobacter capsulatus C4-dicarboxylate-binding periplasmic protein precursor DctP SWALL:DCTP_RHOCA (SWALL:P37735) (333 aa) fasta scores: E(): 2.3e-25, 31.3% id in 329 aa, and to Yersinia pestis C4-dicarboxylate transporter, periplasmic protein ypo1579 SWALL:Q8ZFU9 (EMBL:AJ414149) (330 aa) fasta scores: E(): 5.7e-94, 75.45% id in 330 aa; substrate-binding periplasmic protein 408325 2884696 ECA0357 Pectobacterium atrosepticum SCRI1043 substrate-binding periplasmic protein YP_048483.1 407348 R 218491 CDS YP_048484.1 50119317 2884823 409087..410001 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 biopolymer transport ExbB protein ExbB or b3006 or z4359 or ecs3890 SWALL:EXBB_ECOLI (SWALL:P18783) (244 aa) fasta scores: E(): 9.3e-57, 75.2% id in 242 aa; biopolymer transport protein 410001 exbB 2884823 exbB Pectobacterium atrosepticum SCRI1043 biopolymer transport protein YP_048484.1 409087 D 218491 CDS YP_048485.1 50119318 2884824 410005..410430 1 NC_004547.2 membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell; biopolymer transport protein ExbD 410430 exbD 2884824 exbD Pectobacterium atrosepticum SCRI1043 biopolymer transport protein ExbD YP_048485.1 410005 D 218491 CDS YP_048486.1 50119319 2884420 complement(410542..411561) 1 NC_004547.2 Similar to Erwinia amylovora repressor scrR SWALL:Q9F497 (EMBL:AJ250722) (342 aa) fasta scores: E(): 4.7e-86, 65.46% id in 333 aa, and to Klebsiella pneumoniae sucrose operon repressor scrR SWALL:SCRR_KLEPN (SWALL:P37076) (334 aa) fasta scores: E(): 5.5e-88, 65.07% id in 335 aa; sucrose operon repressor 411561 scrR 2884420 scrR Pectobacterium atrosepticum SCRI1043 sucrose operon repressor YP_048486.1 410542 R 218491 CDS YP_048487.1 50119320 2884424 complement(411592..413001) 1 NC_004547.2 Similar to Erwinia amylovora sucrose hydrolase, invertase ScrB SWALL:Q9F498 (EMBL:AJ250722) (469 aa) fasta scores: E(): 5.2e-132, 62.47% id in 469 aa, and to Klebsiella pneumoniae sucrose-6-phosphate hydrolase ScrB SWALL:SCRB_KLEPN (SWALL:P27217) (465 aa) fasta scores: E(): 1.3e-110, 55.19% id in 462 aa; sucrose-6-phosphate hydrolase 413001 scrB 2884424 scrB Pectobacterium atrosepticum SCRI1043 sucrose-6-phosphate hydrolase YP_048487.1 411592 R 218491 CDS YP_048488.1 50119321 2884423 complement(413001..414371) 1 NC_004547.2 Similar to Klebsiella pneumoniae PTS system, sucrose-specific IIbc component ScrA SWALL:PTSB_KLEPN (SWALL:P27219) (456 aa) fasta scores: E(): 2.1e-142, 80.92% id in 456 aa, and to Erwinia amylovora enzyme II ScrA SWALL:Q9F499 (EMBL:AJ250722) (457 aa) fasta scores: E(): 9e-140, 80.97% id in 452 aa; PTS system sucrose-specific transporter subunit IIBC 414371 scrA 2884423 scrA Pectobacterium atrosepticum SCRI1043 PTS system sucrose-specific transporter subunit IIBC YP_048488.1 413001 R 218491 CDS YP_048489.1 50119322 2884421 complement(414451..415986) 1 NC_004547.2 Similar to Klebsiella pneumoniae sucrose porin precursor ScrY SWALL:SCRY_KLEPN (SWALL:P27218) (505 aa) fasta scores: E(): 1.3e-125, 63.33% id in 510 aa, and to Erwinia amylovora porin ScrY SWALL:Q9F4A0 (EMBL:AJ250722) (514 aa) fasta scores: E(): 8.5e-118, 62.57% id in 521 aa; sucrose porin 415986 scrY 2884421 scrY Pectobacterium atrosepticum SCRI1043 sucrose porin YP_048489.1 414451 R 218491 CDS YP_048490.1 50119323 2884425 complement(416177..417112) 1 NC_004547.2 phosphorylates aminoimidazole ribotide (AIR) which forms 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P); synthesis of HMP-P from AIR is complex and requires the product of thiC gene at least; aminoimidazole riboside kinase 417112 scrK 2884425 scrK Pectobacterium atrosepticum SCRI1043 aminoimidazole riboside kinase YP_048490.1 416177 R 218491 CDS YP_048491.1 50119324 2884667 417455..418135 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo4112 SWALL:AAM87668 (EMBL:AJ414160) (223 aa) fasta scores: E(): 2e-10, 30% id in 190 aa, and to Proteus mirabilis CcM1 protein SWALL:O86433 (EMBL:AJ000084) (228 aa) fasta scores: E(): 1.1e-08, 32.06% id in 131 aa; hypothetical protein 418135 2884667 ECA0365 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048491.1 417455 D 218491 CDS YP_048492.1 50119325 2884668 418295..418606 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c3274 SWALL:AAN81723 (EMBL:AE016765) (103 aa) fasta scores: E(): 2.1e-22, 55.34% id in 103 aa; hypothetical protein 418606 2884668 ECA0366 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048492.1 418295 D 218491 CDS YP_048493.1 50119326 2884669 418603..419019 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein YgjM c3273 SWALL:AAN81722 (EMBL:AE016765) (139 aa) fasta scores: E(): 1.1e-21, 50% id in 134 aa; DNA-binding protein 419019 2884669 ECA0367 Pectobacterium atrosepticum SCRI1043 DNA-binding protein YP_048493.1 418603 D 218491 CDS YP_048494.1 50119327 2883963 419222..419680 1 NC_004547.2 No significant database matches.; hypothetical protein 419680 2883963 ECA0368 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048494.1 419222 D 218491 CDS YP_048495.1 50119328 2883964 complement(419778..421130) 1 NC_004547.2 Similar to Rhizobium meliloti amino acid decarboxylase, pyridoxal-dependent protein rb1241 SWALL:Q92U95 (EMBL:AL603646) (473 aa) fasta scores: E(): 3.5e-54, 42.5% id in 440 aa, and to Polyangium cellulosum aromatic amino acid decarboxylase Ddc SWALL:Q9L402 (EMBL:AJ270937) (512 aa) fasta scores: E(): 1.4e-17, 22.95% id in 453 aa; pyridoxal-dependent decarboxylase 421130 2883964 ECA0369 Pectobacterium atrosepticum SCRI1043 pyridoxal-dependent decarboxylase YP_048495.1 419778 R 218491 CDS YP_048496.1 50119329 2883965 complement(421164..422444) 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein Pa1352 pa1352 SWALL:Q9I3Z2 (EMBL:AE004564) (403 aa) fasta scores: E(): 8.6e-83, 60.45% id in 397 aa, and to Escherichia coli hypothetical protein YgaY SWALL:YGAY_ECOLI (SWALL:P76628) (394 aa) fasta scores: E(): 1.5e-55, 41.17% id in 391 aa. Note that redicted start site of this feature is around 23 AA upstream of that predicted for its ortholgues.; hypothetical protein 422444 2883965 ECA0370 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048496.1 421164 R 218491 CDS YP_048497.1 50119330 2883828 422598..423044 1 NC_004547.2 Similar to Pseudomonas putida conserved hypothetical protein pp0502 SWALL:AAN66130 (EMBL:AE016775) (147 aa) fasta scores: E(): 8e-26, 55.14% id in 136 aa. Note that there are no significant database matches to enterobacterial species.; transcriptional regulator 423044 2883828 ECA0371 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_048497.1 422598 D 218491 CDS YP_048498.1 50119331 2883829 423054..423548 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri hypothetical protein YhbP SWALL:AAN44662 (EMBL:U18997) (147 aa) fasta scores: E(): 2.2e-29, 54.54% id in 143 aa; hypothetical protein 423548 2883829 ECA0372 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048498.1 423054 D 218491 CDS YP_048499.1 50119332 2883830 423578..424231 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein sty3451 SWALL:Q8Z3I6 (EMBL:AL627278) (211 aa) fasta scores: E(): 2.2e-41, 55.76% id in 208 aa, and to Escherichia coli O157:H7 hypothetical protein YraR SWALL:Q8XAA0 (EMBL:AE005544) (226 aa) fasta scores: E(): 2.7e-41, 54.8% id in 208 aa; hypothetical protein 424231 2883830 ECA0373 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048499.1 423578 D 218491 CDS YP_048500.1 50119333 2881811 complement(424243..424707) 1 NC_004547.2 activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions; anaerobic ribonucleotide reductase-activating protein 424707 nrdG 2881811 nrdG Pectobacterium atrosepticum SCRI1043 anaerobic ribonucleotide reductase-activating protein YP_048500.1 424243 R 218491 CDS YP_048501.1 50119334 2881661 complement(424789..426927) 1 NC_004547.2 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; anaerobic ribonucleoside triphosphate reductase 426927 nrdD 2881661 nrdD Pectobacterium atrosepticum SCRI1043 anaerobic ribonucleoside triphosphate reductase YP_048501.1 424789 R 218491 CDS YP_048502.1 50119335 2883511 complement(427331..428068) 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein pa1733 SWALL:Q9I304 (EMBL:AE004599) (243 aa) fasta scores: E(): 5.7e-55, 59.25% id in 243 aa. Note that there are no significant database matches to enterobacterial species.; hypothetical protein 428068 2883511 ECA0376 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048502.1 427331 R 218491 CDS YP_048503.1 50119336 2883512 complement(428092..428913) 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein pa1732 SWALL:Q9I305 (EMBL:AE004599) (266 aa) fasta scores: E(): 9.2e-52, 51.1% id in 272 aa. Note that there are no significant database matches to enterobacterial species.; hypothetical protein 428913 2883512 ECA0377 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048503.1 428092 R 218491 CDS YP_048504.1 50119337 2883513 complement(428910..429839) 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein pa1731 SWALL:Q9I306 (EMBL:AE004599) (317 aa) fasta scores: E(): 1.3e-51, 45.57% id in 316 aa. Note that there are no significant database matches to enterobacterial species.; hypothetical protein 429839 2883513 ECA0378 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048504.1 428910 R 218491 CDS YP_048505.1 50119338 2883402 complement(429833..431263) 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein pa1730 SWALL:Q9I307 (EMBL:AE004599) (470 aa) fasta scores: E(): 9.3e-133, 68.88% id in 466 aa. Note that there are no significant database matches to enterobacterial species.; hypothetical protein 431263 2883402 ECA0379 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048505.1 429833 R 218491 CDS YP_048506.1 50119339 2883403 complement(431494..431880) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi YjgF SWALL:Q9X445 (EMBL:AF095578) (128 aa) fasta scores: E(): 1.5e-36, 82.81% id in 128 aa, and to Yersinia pestis hypothetical protein Ypo3590 SWALL:Q8ZB37 (EMBL:AJ414157) (128 aa) fasta scores: E(): 5.4e-37, 83.59% id in 128 aa; endoribonuclease 431880 2883403 ECA0380 Pectobacterium atrosepticum SCRI1043 endoribonuclease YP_048506.1 431494 R 218491 CDS YP_048507.1 50119340 2882684 complement(431979..432443) 1 NC_004547.2 involved in the allosteric regulation of aspartate carbamoyltransferase; aspartate carbamoyltransferase 432443 pyrI 2882684 pyrI Pectobacterium atrosepticum SCRI1043 aspartate carbamoyltransferase YP_048507.1 431979 R 218491 CDS YP_048508.1 50119341 2882668 complement(432459..433394) 1 NC_004547.2 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 433394 pyrB 2882668 pyrB Pectobacterium atrosepticum SCRI1043 aspartate carbamoyltransferase YP_048508.1 432459 R 218491 CDS YP_048509.1 50119342 2883404 433843..434310 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3447 SWALL:AAM84326 (EMBL:AJ414157) (152 aa) fasta scores: E(): 6.9e-49, 83.89% id in 149 aa, and to Escherichia coli, and Shigella flexneri protein Yjgk SWALL:YJGK_ECOLI (SWALL:P39335) (150 aa) fasta scores: E(): 1.1e-39, 70.47% id in 149 aa; hypothetical protein 434310 2883404 ECA0383 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048509.1 433843 D 218491 CDS YP_048510.1 50119343 2884138 complement(434357..435364) 1 NC_004547.2 catalyzes the formation of L-citrulline from carbamoyl phosphate and L-ornithine in arginine biosynthesis and degradation; E. coli K12 has two genes, argF and argI, capable of producing functional ornithine carbamoyltransferase. When both are active in the same cell, the two gene products form a family of four hybrid trimeric isoenzymes designated, FFF, FFI, FII, and III.; ornithine carbamoyltransferase subunit I 435364 argI 2884138 argI Pectobacterium atrosepticum SCRI1043 ornithine carbamoyltransferase subunit I YP_048510.1 434357 R 218491 CDS YP_048511.1 50119344 2883322 435526..435951 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3445 SWALL:AAM84328 (EMBL:AJ414157) (143 aa) fasta scores: E(): 1e-40, 80.42% id in 143 aa, and to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein YjgD SWALL:YJGD_ECOLI (SWALL:P37163) (138 aa) fasta scores: E(): 2.9e-37, 75.88% id in 141 aa; hypothetical protein 435951 2883322 ECA0385 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048511.1 435526 D 218491 CDS YP_048512.1 50119345 2883323 complement(436144..436647) 1 NC_004547.2 Similar to Yersinia pestis acetyltransferase ypo3444 SWALL:Q8ZBH0 (EMBL:AJ414157) (167 aa) fasta scores: E(): 2.7e-48, 74.84% id in 167 aa, and to Escherichia coli hypothetical acetyltransferase YjgM SWALL:YJGM_ECOLI (SWALL:P39337) (167 aa) fasta scores: E(): 3.4e-41, 67.94% id in 156 aa.; acetyltransferase 436647 2883323 ECA0386 Pectobacterium atrosepticum SCRI1043 acetyltransferase YP_048512.1 436144 R 218491 CDS YP_048513.1 50119346 2883324 437057..438238 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo0399 SWALL:Q8ZIT9 (EMBL:AJ414142) (398 aa) fasta scores: E(): 2.2e-94, 59.04% id in 398 aa; hypothetical protein 438238 2883324 ECA0387 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048513.1 437057 D 218491 CDS YP_048514.1 50119347 2883197 438255..439292 1 NC_004547.2 Similar to Yersinia pestis m48 peptidase family protein ypo0398 SWALL:AAM87329 (EMBL:AJ414142) (348 aa) fasta scores: E(): 4.5e-79, 59.88% id in 344 aa.; peptidase 439292 2883197 ECA0388 Pectobacterium atrosepticum SCRI1043 peptidase YP_048514.1 438255 D 218491 CDS YP_048515.1 50119348 2883198 439647..440726 1 NC_004547.2 Similar to Bradyrhizobium japonicum protein blr6677 SWALL:BAC51942 (EMBL:AP005959) (353 aa) fasta scores: E(): 9.7e-77, 55.45% id in 339 aa, and to Caulobacter crescentus hydrolase, alpha/beta hydrolase fold family cc3204 SWALL:Q9A3K0 (EMBL:AE005984) (358 aa) fasta scores: E(): 1.5e-48, 44.41% id in 331 aa. Note that there are no significant database matches to enterobacterial species.; hypothetical protein 440726 2883198 ECA0389 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048515.1 439647 D 218491 CDS YP_048516.1 50119349 2883199 440934..442553 1 NC_004547.2 Similar to Ralstonia solanacearum probable methyl-accepting chemotaxis transducer transmembrane protein rsc1460 SWALL:Q8XZE1 (EMBL:AL646064) (513 aa) fasta scores: E(): 3.5e-62, 42.3% id in 520 aa, and to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 5.4e-57, 39.42% id in 553 aa.; methyl-accepting chemotaxis protein 442553 2883199 ECA0390 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_048516.1 440934 D 218491 CDS YP_048517.1 50119350 2882910 442927..444705 1 NC_004547.2 Similar to Erwinia chrysanthemi HecB precursor HecB SWALL:P94771 (EMBL:AF501263) (558 aa) fasta scores: E(): 9.6e-40, 29.33% id in 559 aa, and to Yersinia pestis hemolysin activator protein ypo2491 or y1696 SWALL:Q8ZDR5 (EMBL:AJ414152) (562 aa) fasta scores: E(): 8.5e-141, 63.86% id in 559 aa, and to Proteus mirabilis hemolysin activator protein precursor HpmB SWALL:HLYB_PROMI (SWALL:P16465) (561 aa) fasta scores: E(): 2.8e-26, 26.52% id in 524 aa; activator or transporter protein of hemolysin-like protein 444705 2882910 ECA0391 Pectobacterium atrosepticum SCRI1043 activator or transporter protein of hemolysin-like protein YP_048517.1 442927 D 218491 CDS YP_048518.1 50119351 2882912 451996..452394 1 NC_004547.2 Similar to uncultured bacterium orf118 SWALL:AAN16074 (EMBL:AY129391) (117 aa) fasta scores: E(): 1.8e-07, 32.2% id in 118 aa. No other significant database matches.; hypothetical protein 452394 2882912 ECA0394 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048518.1 451996 D 218491 CDS YP_048519.1 50119352 2883971 complement(452395..452937) 1 NC_004547.2 Similar to Escherichia coli RNA 2'-phosphotransferase KptA or b4331 SWALL:KPTA_ECOLI (SWALL:P39380) (184 aa) fasta scores: E(): 2.6e-38, 54.8% id in 177 aa; RNA 2'-phosphotransferase 452937 kptA 2883971 kptA Pectobacterium atrosepticum SCRI1043 RNA 2'-phosphotransferase YP_048519.1 452395 R 218491 CDS YP_048520.1 50119353 2882239 453261..454961 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo2486 SWALL:Q8ZDS0 (EMBL:AJ414152) (677 aa) fasta scores: E(): 5.9e-27, 40.91% id in 479 aa, and to Escherichia coli O6 hypothetical protein c1207 SWALL:Q8FIZ4 (EMBL:AE016758) (537 aa) fasta scores: E(): 2.9e-22, 43.51% id in 347 aa; hemolysin-like protein 454961 2882239 ECA0396 Pectobacterium atrosepticum SCRI1043 hemolysin-like protein YP_048520.1 453261 D 218491 CDS YP_048521.1 50119354 2882240 454963..455337 1 NC_004547.2 No significant database matches.; hypothetical protein 455337 2882240 ECA0397 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048521.1 454963 D 218491 CDS YP_048522.1 50119355 2882241 455619..456002 1 NC_004547.2 No significant database matches.; hypothetical protein 456002 2882241 ECA0398 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048522.1 455619 D 218491 CDS YP_048523.1 50119356 2885465 complement(456048..456269) 1 NC_004547.2 Similar to Shigella flexneri orf, partial conserved hypothetical protein sf0591 SWALL:AAN42233 (EMBL:AE015090) (95 aa) fasta scores: E(): 6.2e-05, 44.44% id in 54 aa. No other significant database matches.; hypothetical protein 456269 2885465 ECA0399 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048523.1 456048 R 218491 CDS YP_048524.1 50119357 2885466 <456305..>456442 1 NC_004547.2 Similar to Yersinia pestis hemagglutinin-like secreted protein y1701 SWALL:AAM85269 (EMBL:AE013774) (681 aa) fasta scores: E(): 1.7e-06, 68.29% id in 41 aa, and to Escherichia coli O6 hypothetical protein c1207 SWALL:AAN79669 (EMBL:AE016758) (537 aa) fasta scores: E(): 2.3e-06, 64.28% id in 42 aa; hemagglutinin-like protein (partial) >456442 2885466 ECA0399A Pectobacterium atrosepticum SCRI1043 hemagglutinin-like protein (partial) YP_048524.1 <456305 D 218491 CDS YP_048525.1 50119358 2885467 456426..456719 1 NC_004547.2 Similar to Human herpesvirus 4 capsid protein vp26 bfrf3 SWALL:CAD53401 (EMBL:AJ507799) (176 aa) fasta scores: E(): 5.7, 33.73% id in 83 aa, and to Epstein-barr virus capsid protein vp26 bfrf3 SWALL:VP26_EBV (SWALL:P14348) (176 aa) fasta scores: E(): 5.7, 33.73% id in 83 aa; No significant database matches.; phage-like protein 456719 2885467 ECA0400 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_048525.1 456426 D 218491 CDS YP_048526.1 50119359 2881765 complement(457211..457861) 1 NC_004547.2 Similar to Streptococcus mutans conserved hypothetical protein smu.1642C SWALL:AAN59281 (EMBL:AE014994) (210 aa) fasta scores: E(): 3.5e-19, 35.92% id in 206 aa. Note that there are no significant database matches to enterobacterial species.; hypothetical protein 457861 2881765 ECA0401 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048526.1 457211 R 218491 CDS YP_048527.1 50119360 2882787 complement(458055..460910) 1 NC_004547.2 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 460910 valS 2882787 valS Pectobacterium atrosepticum SCRI1043 valyl-tRNA synthetase YP_048527.1 458055 R 218491 CDS YP_048528.1 50119361 2882118 complement(460923..461372) 1 NC_004547.2 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit chi 461372 holC 2882118 holC Pectobacterium atrosepticum SCRI1043 DNA polymerase III subunit chi YP_048528.1 460923 R 218491 CDS YP_048529.1 50119362 2885061 complement(461737..463248) 1 NC_004547.2 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 463248 pepA 2885061 pepA Pectobacterium atrosepticum SCRI1043 leucyl aminopeptidase YP_048529.1 461737 R 218491 CDS YP_048530.1 50119363 2881766 463531..464646 1 NC_004547.2 Similar to Salmonella typhimurium permease YjgP SWALL:Q8ZK27 (EMBL:AE008910) (366 aa) fasta scores: E(): 1.1e-107, 73.33% id in 360 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein YjgP SWALL:YJGP_ECOLI (SWALL:P39340) (366 aa) fasta scores: E(): 1.3e-106, 73.46% id in 358 aa. YjgP belongs to a family of predicted permeases but there is no experimental evidence of this.; permease 464646 2881766 ECA0405 Pectobacterium atrosepticum SCRI1043 permease YP_048530.1 463531 D 218491 CDS YP_048531.1 50119364 2881767 464646..465722 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 hypothetical protein YjgQ SWALL:YJGQ_ECOLI (SWALL:P39341) (360 aa) fasta scores: E(): 2.6e-108, 77.24% id in 356 aa, and to Salmonella typhimurium permease YjgQ SWALL:Q8ZK26 (EMBL:AE008910) (360 aa) fasta scores: E(): 2.6e-109, 78.37% id in 356 aa.YjgQ belongs to a family of predicted permeases but there is no experimental evidence of this.; permease 465722 2881767 ECA0406 Pectobacterium atrosepticum SCRI1043 permease YP_048531.1 464646 D 218491 CDS YP_048532.1 50119365 2881510 <466210..466377 1 NC_004547.2 Similar to Shigella flexneri integrase intB or sf4224 SWALL:AAN45643 (EMBL:AE015430) (415 aa) fasta scores: E(): 5.6e-17, 81.48% id in 54 aa, and to Escherichia coli integrase inT SWALL:Q93SE7 (EMBL:AJ278144) (394 aa) fasta scores: E(): 1.7e-15, 70.9% id in 55 aa.; integrase (partial) 466377 2881510 ECA0407 Pectobacterium atrosepticum SCRI1043 integrase (partial) YP_048532.1 <466210 D 218491 CDS YP_048533.1 50119366 2881511 466558..466815 1 NC_004547.2 Similar to Pseudomonas resinovorans hypothetical protein SWALL:BAC41561 (EMBL:AB088420) (133 aa) fasta scores: E(): 5.7e-08, 41.97% id in 81 aa, and to Escherichia coli O157:H7 plasmid po157 DNA, complete sequence l7010 SWALL:O82927 (EMBL:AB011549) (94 aa) fasta scores: E(): 1.7e-06, 38.66% id in 75 aa; plasmid-like protein 466815 2881511 ECA0408 Pectobacterium atrosepticum SCRI1043 plasmid-like protein YP_048533.1 466558 D 218491 CDS YP_048534.1 50119367 2881512 466819..467094 1 NC_004547.2 Similar to Escherichia coli O157:H7 plasmid po157 DNA, complete sequence l7011 SWALL:O82928 (EMBL:AB011549) (91 aa) fasta scores: E(): 9.3e-12, 42.85% id in 91 aa, and to Shigella sonnei YacB protein yacB SWALL:Q9Z4G4 (EMBL:AB021078) (93 aa) fasta scores: E(): 0.63, 30% id in 90 aa; plasmid-like protein 467094 2881512 ECA0409 Pectobacterium atrosepticum SCRI1043 plasmid-like protein YP_048534.1 466819 D 218491 CDS YP_048535.1 50119368 2881528 467142..467654 1 NC_004547.2 Similar to Corynebacterium glutamicum shikimate kinase Arok or cgl1622 SWALL:AROK_CORGL (SWALL:Q9X5D1) (169 aa) fasta scores: E(): 0.12, 26.62% id in 169 aa, and to Xanthomonas campestris hypothetical protein Xcc0737 SWALL:Q8PCI9 (EMBL:AE012173) (148 aa) fasta scores: E(): 2e-19, 52.38% id in 126 aa; kinase 467654 2881528 ECA0410 Pectobacterium atrosepticum SCRI1043 kinase YP_048535.1 467142 D 218491 CDS YP_048536.1 50119369 2881530 complement(469396..472884) 1 NC_004547.2 Weakly similar to Bacillus subtilis DNA-binding protein YobI SWALL:O34784 (EMBL:AF027868) (1201 aa) fasta scores: E(): 2.7, 21.21% id in 773 aa. Note that there are no significant database matches to enterobacterial species.; hypothetical protein 472884 2881530 ECA0413 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048536.1 469396 R 218491 CDS YP_048537.1 50119370 2881299 complement(473425..473673) 1 NC_004547.2 Similar to Bacteriophage 186 late control protein B SWALL:VPB_BP186 (SWALL:P08711) (72 aa) fasta scores: E(): 1.1e-08, 52.38% id in 63 aa, and to Salmonella typhi bacteriophage gene regulatory protein sty4826 SWALL:Q8Z107 (EMBL:AL627283) (79 aa) fasta scores: E(): 3.2e-12, 57.57% id in 66 aa. Also similar to ECA0833 (41.818% id. in 55 aa overlap), and to ECA3454 (84.146% id. in 50 aa overlap), and to ECA2599 (39.726% id. in 51 aa overlap).; bacteriophage regulatory protein 473673 2881299 ECA0414 Pectobacterium atrosepticum SCRI1043 bacteriophage regulatory protein YP_048537.1 473425 R 218491 CDS YP_048538.1 50119371 2881399 476014..477135 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein ycfd ycfd or c1480 SWALL:AAN79949 (EMBL:AE016759) (376 aa) fasta scores: E(): 1.3e-105, 66.12% id in 372 aa; hypothetical protein 477135 2881399 ECA0420 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048538.1 476014 D 218491 CDS YP_048539.1 50119372 2881400 477432..478562 1 NC_004547.2 Similar to Zymomonas mobilis hypothetical protein SWALL:AAL36135 (EMBL:AY057845) (394 aa) fasta scores: E(): 2.9e-49, 41.3% id in 368 aa. Note that there are no significant database matches to enterobacterial species.; exported lipase 478562 2881400 ECA0421 Pectobacterium atrosepticum SCRI1043 exported lipase YP_048539.1 477432 D 218491 CDS YP_048540.1 50119373 2881705 complement(478617..479807) 1 NC_004547.2 Similar to Vibrio vulnificus ABC-type multidrug transport system, permease component vv12691 SWALL:AAO11038 (EMBL:AE016806) (381 aa) fasta scores: E(): 1.2e-62, 45.26% id in 391 aa; hypothetical protein 479807 2881705 ECA0422 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048540.1 478617 R 218491 CDS YP_048541.1 50119374 2881706 complement(479801..480919) 1 NC_004547.2 Similar to Vibrio cholerae hypothetical protein Vc1608 vc1608 SWALL:Q9KRM8 (EMBL:AE004238) (387 aa) fasta scores: E(): 3.2e-46, 38.08% id in 365 aa; hypothetical protein 480919 2881706 ECA0423 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048541.1 479801 R 218491 CDS YP_048542.1 50119375 2881707 complement(480919..481917) 1 NC_004547.2 Similar to Vibrio cholerae hypothetical protein vc1607 SWALL:Q9KRM9 (EMBL:AE004238) (324 aa) fasta scores: E(): 1.5e-72, 62.03% id in 324 aa.; hypothetical protein 481917 2881707 ECA0424 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048542.1 480919 R 218491 CDS YP_048543.1 50119376 2882567 complement(481914..483335) 1 NC_004547.2 Similar to Vibrio cholerae hypothetical protein Vc1606 SWALL:Q9KRN0 (EMBL:AE004238) (476 aa) fasta scores: E(): 6e-69, 44.34% id in 451 aa, and to Shewanella oneidensis outer membrane efflux protein so4090 SWALL:AAN57064 (EMBL:AE015839) (473 aa) fasta scores: E(): 1.2e-68, 45.11% id in 450 aa; outer membrane efflux protein 483335 2882567 ECA0425 Pectobacterium atrosepticum SCRI1043 outer membrane efflux protein YP_048543.1 481914 R 218491 CDS YP_048544.1 50119377 2885552 complement(483705..485144) 1 NC_004547.2 catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 485144 aspA1 2885552 aspA1 Pectobacterium atrosepticum SCRI1043 aspartate ammonia-lyase YP_048544.1 483705 R 218491 CDS YP_048545.1 50119378 2882568 complement(485398..486354) 1 NC_004547.2 Similar to Brucella melitensis transcriptional regulatory protein, LysR family bmei0116 SWALL:Q8YJG7 (EMBL:AE009454) (308 aa) fasta scores: E(): 1.7e-24, 29.18% id in 305 aa; LysR family transcriptional regulator 486354 2882568 ECA0427 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_048545.1 485398 R 218491 CDS YP_048546.1 50119379 2882569 487122..488642 1 NC_004547.2 Similar to Porphyromonas gingivalis immunogenic 23 kDa lipoprotein pg3 SWALL:Q9XCA4 (EMBL:AF145799) (223 aa) fasta scores: E(): 2.3e-10, 32.2% id in 236 aa, and to Escherichia coli hypothetical lipoprotein YiaD precursor SWALL:YIAD_ECOLI (SWALL:P37665) (219 aa) fasta scores: E(): 1.5e-09, 35.13% id in 222 aa.; porin 488642 2882569 ECA0428 Pectobacterium atrosepticum SCRI1043 porin YP_048546.1 487122 D 218491 CDS YP_048547.1 50119380 2882503 488659..490308 1 NC_004547.2 No significant database matches.; hypothetical protein 490308 2882503 ECA0429 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048547.1 488659 D 218491 CDS YP_048548.1 50119381 2882504 490305..491135 1 NC_004547.2 No significant database matches.; hypothetical protein 491135 2882504 ECA0430 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048548.1 490305 D 218491 CDS YP_048549.1 50119382 2882505 491595..492941 1 NC_004547.2 No significant database matches.; hypothetical protein 492941 2882505 ECA0431 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048549.1 491595 D 218491 CDS YP_048550.1 50119383 2881708 complement(492953..493744) 1 NC_004547.2 Similar to Neisseria polysaccharea hypothetical protein SWALL:AAO17344 (EMBL:AF542178) (249 aa) fasta scores: E(): 4e-35, 38.97% id in 254 aa; hypothetical protein 493744 2881708 ECA0432 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048550.1 492953 R 218491 CDS YP_048551.1 50119384 2881709 493897..494994 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein pa2695 SWALL:Q9I0E7 (EMBL:AE004697) (367 aa) fasta scores: E(): 4.9e-93, 67.61% id in 352 aa, and to Escherichia coli hypothetical protein YaiW SWALL:YAIW_ECOLI (SWALL:P77562) (364 aa) fasta scores: E(): 4.5e-89, 66.02% id in 365 aa.; lipoprotein 494994 2881709 ECA0433 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_048551.1 493897 D 218491 CDS YP_048552.1 50119385 2881710 complement(495149..497098) 1 NC_004547.2 Similar to Rahnella aquatilis methyl-accepting chemotaxis protein I SWALL:Q93ET6 (EMBL:AF338038) (554 aa) fasta scores: E(): 2.3e-40, 34.6% id in 500 aa, and to Salmonella typhimurium methyl-accepting chemotaxis protein II Tar or CheM SWALL:MCP2_SALTY (SWALL:P02941) (553 aa) fasta scores: E(): 8.8e-39, 36.2% id in 464 aa; methyl-accepting chemotaxis protein 497098 2881710 ECA0434 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_048552.1 495149 R 218491 CDS YP_048553.1 50119386 2883178 complement(497561..500272) 1 NC_004547.2 Similar to Salmonella typhimurium Mg(2+) transport ATPase MgtB or stm3763 SWALL:ATMB_SALTY (SWALL:P22036) (908 aa) fasta scores: E(): 0, 70.62% id in 909 aa; magnesium transport ATPase 500272 mgtB 2883178 mgtB Pectobacterium atrosepticum SCRI1043 magnesium transport ATPase YP_048553.1 497561 R 218491 CDS YP_048554.1 50119387 2881269 complement(500719..502296) 1 NC_004547.2 Similar to Rahnella aquatilis methyl-accepting chemotaxis protein I SWALL:Q93ET6 (EMBL:AF338038) (554 aa) fasta scores: E(): 6.9e-55, 40.22% id in 527 aa, and to Salmonella typhimurium methyl-accepting chemotaxis protein II Tar or Chem SWALL:MCP2_SALTY (SWALL:P02941) (553 aa) fasta scores: E(): 4.7e-51, 40.61% id in 517 aa; methyl-accepting chemotaxis protein 502296 2881269 ECA0436 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_048554.1 500719 R 218491 CDS YP_048555.1 50119388 2881270 complement(502735..503049) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo0326 SWALL:Q8ZJ05 (EMBL:AJ414142) (104 aa) fasta scores: E(): 1.3e-33, 75% id in 104 aa, and to Escherichia coli hypothetical protein yiil SWALL:YIIL_ECOLI (SWALL:P32156) (104 aa) fasta scores: E(): 3.4e-33, 73.78% id in 103 aa; hypothetical protein 503049 2881270 ECA0437 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048555.1 502735 R 218491 CDS YP_048556.1 50119389 2884838 complement(503193..504017) 1 NC_004547.2 Similar to Escherichia coli rhamnulose-1-phosphate aldolase RhaD or b3902 SWALL:RHAD_ECOLI (SWALL:P32169) (274 aa) fasta scores: E(): 7.4e-86, 74.63% id in 272 aa; rhamnulose-1-phosphate aldolase 504017 rhaD 2884838 rhaD Pectobacterium atrosepticum SCRI1043 rhamnulose-1-phosphate aldolase YP_048556.1 503193 R 218491 CDS YP_048557.1 50119390 2884836 complement(504022..505284) 1 NC_004547.2 catalyzes the formation of L-rhamnulose from L-rhamnose; L-rhamnose isomerase 505284 rhaA 2884836 rhaA Pectobacterium atrosepticum SCRI1043 L-rhamnose isomerase YP_048557.1 504022 R 218491 CDS YP_048558.1 50119391 2884837 complement(505281..506771) 1 NC_004547.2 catalyzes the ATP-dependent phosphorylation of rhamnulose; rhamnulokinase 506771 rhaB 2884837 rhaB Pectobacterium atrosepticum SCRI1043 rhamnulokinase YP_048558.1 505281 R 218491 CDS YP_048559.1 50119392 2884603 507088..507927 1 NC_004547.2 activates the expression of the rhaBAD operon and rhaT gene; transcriptional activator RhaS 507927 rhaS 2884603 rhaS Pectobacterium atrosepticum SCRI1043 transcriptional activator RhaS YP_048559.1 507088 D 218491 CDS YP_048560.1 50119393 2884602 507952..508806 1 NC_004547.2 Similar to Escherichia coli L-rhamnose operon transcriptional activator RhaR or RhaC1 or b3906 SWALL:RHAR_ECOLI (SWALL:P09378) (312 aa) fasta scores: E(): 1.4e-50, 46.95% id in 279 aa; L-rhamnose operon transcriptional activator 508806 rhaR 2884602 rhaR Pectobacterium atrosepticum SCRI1043 L-rhamnose operon transcriptional activator YP_048560.1 507952 D 218491 CDS YP_048561.1 50119394 2881271 complement(508848..509102) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri hypothetical protein YoeB SWALL:YOEB_ECOLI (SWALL:P56605) (84 aa) fasta scores: E(): 8.2e-31, 85.71% id in 84 aa.; hypothetical protein 509102 2881271 ECA0443 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048561.1 508848 R 218491 CDS YP_048562.1 50119395 2881384 complement(509099..509350) 1 NC_004547.2 Antitoxin that counteracts the effect of the YoeB toxin; antitoxin YefM 509350 2881384 ECA0444 Pectobacterium atrosepticum SCRI1043 antitoxin YefM YP_048562.1 509099 R 218491 CDS YP_048563.1 50119396 2881385 complement(509425..511134) 1 NC_004547.2 Similar to Bradyrhizobium japonicum ABC transporter ATP-binding protein blr1604 SWALL:BAC46869 (EMBL:AP005940) (626 aa) fasta scores: E(): 4.6e-90, 49.21% id in 573 aa, and to Agrobacterium tumefaciens MoaD SWALL:O50270 (EMBL:AF242881) (588 aa) fasta scores: E(): 2.2e-61, 39.78% id in 553 aa; ABC transporter ATP-binding protein 511134 2881385 ECA0445 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_048563.1 509425 R 218491 CDS YP_048564.1 50119397 2881386 complement(511131..511997) 1 NC_004547.2 Similar to Xanthomonas axonopodis ABC transporter permease OppC SWALL:Q8PP30 (EMBL:AE011717) (294 aa) fasta scores: E(): 8.7e-38, 43.26% id in 282 aa; ABC transporter permease 511997 2881386 ECA0446 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_048564.1 511131 R 218491 CDS YP_048565.1 50119398 2885242 complement(511990..512949) 1 NC_004547.2 Similar to Xanthomonas axonopodis ABC transporter permease oppC SWALL:Q8PP31 (EMBL:AE011717) (325 aa) fasta scores: E(): 2e-42, 43.27% id in 305 aa, and to Salmonella typhi hypothetical ABC transporter permease protein yliC SWALL:Q8Z862 (EMBL:AL627268) (306 aa) fasta scores: E(): 1.1e-34, 36.36% id in 308 aa; ABC transporter permease 512949 2885242 ECA0447 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_048565.1 511990 R 218491 CDS YP_048566.1 50119399 2885243 complement(512927..514540) 1 NC_004547.2 Similar to Xanthomonas axonopodis ABC transporter oligopeptide binding protein oppa or xac0856 SWALL:Q8PP32 (EMBL:AE011717) (538 aa) fasta scores: E(): 9.5e-59, 33.84% id in 526 aa, and to Escherichia coli O157:H7 periplasmic binding protein for nickel nika or z4868 or ecs4343 SWALL:Q8X5U3 (EMBL:AE005572) (524 aa) fasta scores: E(): 9.3e-27, 26.4% id in 534 aa; ABC transporter extracellular solute binding protein 514540 2885243 ECA0448 Pectobacterium atrosepticum SCRI1043 ABC transporter extracellular solute binding protein YP_048566.1 512927 R 218491 CDS YP_048567.1 50119400 2885244 515161..515775 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YagU SWALL:YAGU_ECOLI (SWALL:P77262) (204 aa) fasta scores: E(): 1.6e-77, 88.23% id in 204 aa; hypothetical protein 515775 2885244 ECA0449 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048567.1 515161 D 218491 CDS YP_048568.1 50119401 2884604 complement(516073..517107) 1 NC_004547.2 transports L-rhamnose and L-lyxose into the cell; rhamnose-proton symporter 517107 rhaT 2884604 rhaT Pectobacterium atrosepticum SCRI1043 rhamnose-proton symporter YP_048568.1 516073 R 218491 CDS YP_048569.1 50119402 2885798 517457..517939 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein yqha sty3326 or t3074 SWALL:YQHA_SALTI (SWALL:Q8Z3Q8) (164 aa) fasta scores: E(): 5.4e-49, 84.41% id in 154 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4574 pa4574 SWALL:Y9H4_PSEAE (SWALL:Q9HVL0) (162 aa) fasta scores: E(): 7.2e-49, 83.11% id in 154 aa; hypothetical protein 517939 2885798 ECA0451 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048569.1 517457 D 218491 CDS YP_048570.1 50119403 2885799 518034..519071 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein pa2197 SWALL:Q9I1S0 (EMBL:AE004646) (345 aa) fasta scores: E(): 1.9e-102, 75.94% id in 345 aa, and to Salmonella typhi NADP-dependent oxidoreductase sty1476 SWALL:Q8Z742 (EMBL:AL627270) (345 aa) fasta scores: E(): 1.7e-100, 76.23% id in 345 aa; zinc-binding dehydrogenase 519071 2885799 ECA0452 Pectobacterium atrosepticum SCRI1043 zinc-binding dehydrogenase YP_048570.1 518034 D 218491 CDS YP_048571.1 50119404 2885800 complement(519168..519398) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo0754 SWALL:Q8ZHX2 (EMBL:AJ414144) (100 aa) fasta scores: E(): 3.1, 30% id in 60 aa, and to Salmonella typhimurium inner membrane protein yjeo or stm4346 SWALL:Q8ZKB3 (EMBL:AE008904) (104 aa) fasta scores: E(): 0.34, 34% id in 50 aa; hypothetical protein 519398 2885800 ECA0453 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048571.1 519168 R 218491 CDS YP_048572.1 50119405 2885113 complement(519485..519781) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo0754 SWALL:Q8ZHX2 (EMBL:AJ414144) (100 aa) fasta scores: E(): 1.5, 29.89% id in 97 aa, and to Salmonella typhimurium inner membrane protein yjeo or stm4346 SWALL:Q8ZKB3 (EMBL:AE008904) (104 aa) fasta scores: E(): 0.00095, 30.2% id in 96 aa; hypothetical protein 519781 2885113 ECA0454 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048572.1 519485 R 218491 CDS YP_048573.1 50119406 2885114 complement(519800..520555) 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c3766 SWALL:AAN82210 (EMBL:AE016766) (245 aa) fasta scores: E(): 1.7e-14, 34.93% id in 229 aa.; hypothetical protein 520555 2885114 ECA0455 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048573.1 519800 R 218491 CDS YP_048574.1 50119407 2885115 complement(520562..521041) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2868 SWALL:AAM84938 (EMBL:AJ414154) (159 aa) fasta scores: E(): 2.3e-30, 50.94% id in 159 aa, and to Escherichia coli O6 conserved hypothetical protein c3767 SWALL:AAN82211 (EMBL:AE016766) (159 aa) fasta scores: E(): 2.6e-22, 42.76% id in 159 aa; hypothetical protein 521041 2885115 ECA0456 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048574.1 520562 R 218491 CDS YP_048575.1 50119408 2882695 complement(521576..522787) 1 NC_004547.2 Similar to Escherichia coli protein VisC or b2906 SWALL:VISC_ECOLI (SWALL:P25535) (400 aa) fasta scores: E(): 3.8e-114, 72.43% id in 399 aa; hypothetical protein 522787 visC 2882695 visC Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048575.1 521576 R 218491 CDS YP_048576.1 50119409 2882694 complement(522816..523994) 1 NC_004547.2 Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone; 2-octaprenyl-6-methoxyphenyl hydroxylase 523994 visB 2882694 visB Pectobacterium atrosepticum SCRI1043 2-octaprenyl-6-methoxyphenyl hydroxylase YP_048576.1 522816 R 218491 CDS YP_048577.1 50119410 2885191 complement(524040..525365) 1 NC_004547.2 exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue; substrate can be as short as a dipeptide; proline aminopeptidase P II 525365 pepP 2885191 pepP Pectobacterium atrosepticum SCRI1043 proline aminopeptidase P II YP_048577.1 524040 R 218491 CDS YP_048578.1 50119411 2884503 complement(525471..526058) 1 NC_004547.2 the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown; hypothetical protein 526058 2884503 ECA0460 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048578.1 525471 R 218491 CDS YP_048579.1 50119412 2884504 526251..526580 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo0912 SWALL:Q8ZHI1 (EMBL:AJ414145) (109 aa) fasta scores: E(): 2.9e-35, 91.74% id in 109 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein YgfE SWALL:YGFE_ECOLI (SWALL:P45580) (109 aa) fasta scores: E(): 3.1e-31, 82.56% id in 109 aa; Z-ring-associated protein 526580 2884504 ECA0461 Pectobacterium atrosepticum SCRI1043 Z-ring-associated protein YP_048579.1 526251 D 218491 CDS YP_048580.1 50119413 2884505 526894..527520 1 NC_004547.2 Similar to Oryctolagus cuniculus 5-formyltetrahydrofolate cyclo-ligase MthfS SWALL:FTHC_RABIT (SWALL:P80405) (201 aa) fasta scores: E(): 2.9e-11, 28.35% id in 201 aa, and to Yersinia pestis 5-formyltetrahydrofolate cyclo-ligase-family protein ypo0913 or y3300 SWALL:Q8ZHI0 (EMBL:AJ414145) (198 aa) fasta scores: E(): 1.2e-51, 67.87% id in 193 aa; 5-formyltetrahydrofolate cyclo-ligase 527520 2884505 ECA0462 Pectobacterium atrosepticum SCRI1043 5-formyltetrahydrofolate cyclo-ligase YP_048580.1 526894 D 218491 CDS YP_048581.1 50119414 2884927 complement(527517..528770) 1 NC_004547.2 catalyzes the formation of NAD(+) from nicotinamide ribonucleotide; nicotinamide-nucleotide adenylyltransferase 528770 nadR 2884927 nadR Pectobacterium atrosepticum SCRI1043 nicotinamide-nucleotide adenylyltransferase YP_048581.1 527517 R 218491 CDS YP_048582.1 50119415 2882879 complement(528905..530287) 1 NC_004547.2 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 530287 radA 2882879 radA Pectobacterium atrosepticum SCRI1043 DNA repair protein RadA YP_048582.1 528905 R 218491 CDS YP_048583.1 50119416 2884403 complement(530305..531282) 1 NC_004547.2 catalyzes the formation of serine from O-phosphoserine; phosphoserine phosphatase 531282 serB 2884403 serB Pectobacterium atrosepticum SCRI1043 phosphoserine phosphatase YP_048583.1 530305 R 218491 CDS YP_048584.1 50119417 2884380 531439..532134 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri protein Smp precursor Smp or b4387 or sf4419 SWALL:SMP_ECOLI (SWALL:P18838) (214 aa) fasta scores: E(): 3.9e-52, 65.72% id in 213 aa; hypothetical protein 532134 smp 2884380 smp Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048584.1 531439 D 218491 CDS YP_048585.1 50119418 2884766 complement(532188..533090) 1 NC_004547.2 No significant database matches.; hypothetical protein 533090 2884766 ECA0467 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048585.1 532188 R 218491 CDS YP_048586.1 50119419 2882308 533382..534971 1 NC_004547.2 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; peptide chain release factor 3 534971 prfC 2882308 prfC Pectobacterium atrosepticum SCRI1043 peptide chain release factor 3 YP_048586.1 533382 D 218491 CDS YP_048587.1 50119420 2882707 535473..536081 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 osmotically inducible protein Y precursor OsmY or b4376 or c5457 SWALL:OSMY_ECOLI (SWALL:P27291) (201 aa) fasta scores: E(): 6.7e-31, 56.93% id in 202 aa; periplasmic protein 536081 osmY 2882707 osmY Pectobacterium atrosepticum SCRI1043 periplasmic protein YP_048587.1 535473 D 218491 CDS YP_048588.1 50119421 2884767 536233..536394 1 NC_004547.2 Similar to Escherichia coli O157:H7 hypothetical protein Z5978 SWALL:Q8X479 (EMBL:AE005669) (59 aa) fasta scores: E(): 3.4e-16, 98.11% id in 53 aa, and to Salmonella typhimurium, and Salmonella typhi inner membrane protein stm4562 or sty4912 SWALL:Q8XEW6 (EMBL:AE008914) (59 aa) fasta scores: E(): 4e-16, 96.22% id in 53 aa; hypothetical protein 536394 2884767 ECA0470 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048588.1 536233 D 218491 CDS YP_048589.1 50119422 2884768 536538..536726 1 NC_004547.2 Similar to Xanthomonas axonopodis hypothetical protein xac4007 SWALL:Q8PFH4 (EMBL:AE012049) (69 aa) fasta scores: E(): 6.4e-07, 47.36% id in 57 aa, and to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri protein YjbJ SWALL:AAN45582 (EMBL:U00006) (71 aa) fasta scores: E(): 0.00014, 37.93% id in 58 aa.; hypothetical protein 536726 2884768 ECA0471 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048589.1 536538 D 218491 CDS YP_048590.1 50119423 2884697 536846..537643 1 NC_004547.2 Similar to Yersinia pestis metalloenzyme ypo0434 SWALL:Q8ZIQ6 (EMBL:AJ414142) (262 aa) fasta scores: E(): 1.3e-62, 64.2% id in 257 aa, and to Escherichia coli deoxyribonuclease YjjV SWALL:YJJV_ECOLI (SWALL:P39408) (259 aa) fasta scores: E(): 1.8e-61, 62.45% id in 253 aa; TatD family deoxyribonuclease 537643 2884697 ECA0472 Pectobacterium atrosepticum SCRI1043 TatD family deoxyribonuclease YP_048590.1 536846 D 218491 CDS YP_048591.1 50119424 2884698 537938..539215 1 NC_004547.2 Similar to Yersinia pestis Na+ dependent nucleoside transporter-family protein ypo0435 SWALL:Q8ZIQ5 (EMBL:AJ414142) (423 aa) fasta scores: E(): 9.9e-133, 84.39% id in 423 aa; Na+ dependent nucleoside transporter-family protein 539215 2884698 ECA0473 Pectobacterium atrosepticum SCRI1043 Na+ dependent nucleoside transporter-family protein YP_048591.1 537938 D 218491 CDS YP_048592.1 50119425 2884863 539365..540081 1 NC_004547.2 Similar to Escherichia coli 4'-phosphopantetheinyl transferase EntD or b0583 SWALL:ENTD_ECOLI (SWALL:P19925) (209 aa) fasta scores: E(): 4.1e-09, 31.49% id in 181 aa, and to Photorhabdus luminescens NgrA SWALL:Q9AI14 (EMBL:AF288077) (248 aa) fasta scores: E(): 2.9e-24, 34.32% id in 236 aa; enterobactin synthetase subunit D 540081 entD 2884863 entD Pectobacterium atrosepticum SCRI1043 enterobactin synthetase subunit D YP_048592.1 539365 D 218491 CDS YP_048593.1 50119426 2884699 complement(540116..542077) 1 NC_004547.2 Similar to Escherichia coli colicin I receptor precursor CirA or Cir or FeuA or b2155 SWALL:CIRA_ECOLI (SWALL:P17315) (663 aa) fasta scores: E(): 9.5e-57, 36.61% id in 661 aa, and to Vibrio cholerae iron-regulated outer membrane virulence protein precursor IrgA or vc0475 SWALL:IRGA_VIBCH (SWALL:P27772) (652 aa) fasta scores: E(): 1.1e-48, 29.73% id in 676 aa; TonB-dependent siderophore receptor protein 542077 2884699 ECA0475 Pectobacterium atrosepticum SCRI1043 TonB-dependent siderophore receptor protein YP_048593.1 540116 R 218491 CDS YP_048594.1 50119427 2884661 complement(542160..543410) 1 NC_004547.2 Similar to Stigmatella aurantiaca MxcK SWALL:Q9F632 (EMBL:AF299336) (407 aa) fasta scores: E(): 2.9e-29, 32.74% id in 394 aa, and to Azotobacter vinelandii AvxA SWALL:Q8KY99 (EMBL:AF238500) (407 aa) fasta scores: E(): 1.2e-25, 35.04% id in 371 aa; iron transporter 543410 2884661 ECA0476 Pectobacterium atrosepticum SCRI1043 iron transporter YP_048594.1 542160 R 218491 CDS YP_048595.1 50119428 2884883 543754..544950 1 NC_004547.2 synthesizes isochorismate acid from chorismate; isochorismate synthase 544950 entC 2884883 entC Pectobacterium atrosepticum SCRI1043 isochorismate synthase YP_048595.1 543754 D 218491 CDS YP_048596.1 50119429 2884864 544947..546572 1 NC_004547.2 bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate; enterobactin synthase subunit E 546572 entE 2884864 entE Pectobacterium atrosepticum SCRI1043 enterobactin synthase subunit E YP_048596.1 544947 D 218491 CDS YP_048597.1 50119430 2884882 546583..547458 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri isochorismatase EntB or EntG or b0595 or z0737 or ecs0634 or sf0509 SWALL:ENTB_ECOLI (SWALL:P15048) (285 aa) fasta scores: E(): 1.1e-69, 63.63% id in 286 aa; enterobactin synthetase subunit B 547458 entB 2884882 entB Pectobacterium atrosepticum SCRI1043 enterobactin synthetase subunit B YP_048597.1 546583 D 218491 CDS YP_048598.1 50119431 2884865 547455..550598 1 NC_004547.2 Similar to Escherichia coli enterobactin synthetase component F EntF or b0586 SWALL:ENTF_ECOLI (SWALL:P11454) (1293 aa) fasta scores: E(): 2.4e-63, 30.4% id in 1069 aa, and to Stigmatella aurantiaca MxcG SWALL:Q9F636 (EMBL:AF299336) (1456 aa) fasta scores: E(): 6.8e-106, 41.03% id in 1065 aa; enterobactin synthetase subunit F 550598 entF 2884865 entF Pectobacterium atrosepticum SCRI1043 enterobactin synthetase subunit F YP_048598.1 547455 D 218491 CDS YP_048599.1 50119432 2884881 550604..551389 1 NC_004547.2 catalyzes the formation of 2,3-dihydroxybenzoate from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin; 2,3-dihydroxybenzoate-2,3-dehydrogenase 551389 entA 2884881 entA Pectobacterium atrosepticum SCRI1043 2,3-dihydroxybenzoate-2,3-dehydrogenase YP_048599.1 550604 D 218491 CDS YP_048600.1 50119433 2884662 551412..557762 1 NC_004547.2 Similar to Bacillus subtilis fengycin synthetase FenE SWALL:O30981 (EMBL:AF023465) (2554 aa) fasta scores: E(): 1.3e-104, 31.95% id in 1546 aa, and to Pseudomonas putida non-ribosomal peptide synthetase domain protein, pp4220 SWALL:AAN69801 (EMBL:AE016789) (2628 aa) fasta scores: E(): 1.1e-112, 31.67% id in 2033 aa; non-ribosomal peptide synthetase 557762 2884662 ECA0482 Pectobacterium atrosepticum SCRI1043 non-ribosomal peptide synthetase YP_048600.1 551412 D 218491 CDS YP_048601.1 50119434 2884663 557759..559873 1 NC_004547.2 Similar to Tolypothrix sp. PCC 7601/1 peptide synthetase TpsA SWALL:Q93IL7 (EMBL:AJ318786) (930 aa) fasta scores: E(): 4.5e-41, 30.3% id in 561 aa, and to Pseudomonas syringae syringomycin biosynthesis enzyme 1 SyrB1 SWALL:Q52400 (EMBL:U25130) (614 aa) fasta scores: E(): 1e-40, 32.3% id in 517 aa; non-ribosomal peptide synthetase 559873 2884663 ECA0483 Pectobacterium atrosepticum SCRI1043 non-ribosomal peptide synthetase YP_048601.1 557759 D 218491 CDS YP_048602.1 50119435 2884652 560026..560256 1 NC_004547.2 No significant database matches. Possible false CDS.; hypothetical protein 560256 2884652 ECA0484 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048602.1 560026 D 218491 CDS YP_048603.1 50119436 2884653 complement(560283..562364) 1 NC_004547.2 Similar to Pseudomonas putida hypothetical protein pp5236 SWALL:AAN70801 (EMBL:AE016793) (707 aa) fasta scores: E(): 6.7e-20, 25.88% id in 653 aa, and to Yersinia pestis membrane protein ypo1990 SWALL:Q8ZF06 (EMBL:AJ414150) (703 aa) fasta scores: E(): 3.6e-12, 23.26% id in 533 aa; hypothetical protein 562364 2884653 ECA0485 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048603.1 560283 R 218491 CDS YP_048604.1 50119437 2884654 562387..562722 1 NC_004547.2 No significant database matches.; hypothetical protein 562722 2884654 ECA0486 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048604.1 562387 D 218491 CDS YP_048605.1 50119438 2885078 563152..564084 1 NC_004547.2 Similar to Streptomyces wedmorensis phosphoenolpyruvate phosphomutase Fom1 SWALL:P96074 (EMBL:AB016934) (435 aa) fasta scores: E(): 6.1e-59, 54.26% id in 293 aa, and to Streptomyces hygroscopicus phosphoenolpyruvate phosphomutase BcpB SWALL:PEPM_STRHY (SWALL:P29247) (313 aa) fasta scores: E(): 2.7e-22, 35.39% id in 291 aa; phosphoenolpyruvate phosphomutase 564084 fom1 2885078 fom1 Pectobacterium atrosepticum SCRI1043 phosphoenolpyruvate phosphomutase YP_048605.1 563152 D 218491 CDS YP_048606.1 50119439 2885079 564264..565418 1 NC_004547.2 Similar to Streptomyces wedmorensis phosphonopyruvate decarboxylase Fom2 SWALL:Q56190 (EMBL:AB016934) (384 aa) fasta scores: E(): 3.3e-55, 45.5% id in 389 aa, and to Streptomyces viridochromogenes 3-phosphonopyruvate decarboxylase Ppd SWALL:PPD_STRVR (SWALL:O86938) (397 aa) fasta scores: E(): 1.8e-26, 34.56% id in 405 aa; phosphonopyruvate decarboxylase 565418 fom2 2885079 fom2 Pectobacterium atrosepticum SCRI1043 phosphonopyruvate decarboxylase YP_048606.1 564264 D 218491 CDS YP_048607.1 50119440 2884816 565471..566364 1 NC_004547.2 Similar to Escherichia coli 2-hydroxy-3-oxopropionate reductase GlxR or GlxB1 or b0509 SWALL:GLXR_ECOLI (SWALL:P77161) (292 aa) fasta scores: E(): 4.9e-13, 26.16% id in 279 aa, and to Pseudomonas aeruginosa probable 3-hydroxyisobutyrate dehydrogenase pa3312 SWALL:Q9HYT2 (EMBL:AE004753) (296 aa) fasta scores: E(): 3.4e-17, 31.09% id in 283 aa; 2-hydroxy-3-oxopropionate reductase 566364 2884816 ECA0489 Pectobacterium atrosepticum SCRI1043 2-hydroxy-3-oxopropionate reductase YP_048607.1 565471 D 218491 CDS YP_048608.1 50119441 2884716 566365..566808 1 NC_004547.2 Similar to Escherichia coli PhnG protein PhnG or b4101 SWALL:PHNG_ECOLI (SWALL:P16685) (150 aa) fasta scores: E(): 8.5e-27, 50.68% id in 146 aa; phosphonate metabolism protein 566808 phnG 2884716 phnG Pectobacterium atrosepticum SCRI1043 phosphonate metabolism protein YP_048608.1 566365 D 218491 CDS YP_048609.1 50119442 2885732 566824..567396 1 NC_004547.2 Similar to Escherichia coli PhnH protein phnH SWALL:PHNH_ECOLI (SWALL:P16686) (194 aa) fasta scores: E(): 5.7e-26, 41.57% id in 190 aa.; carbon-phosphorus lyase complex subunit 567396 phnH 2885732 phnH Pectobacterium atrosepticum SCRI1043 carbon-phosphorus lyase complex subunit YP_048609.1 566824 D 218491 CDS YP_048610.1 50119443 2885733 567396..568499 1 NC_004547.2 Similar to Yersinia pestis PhnI protein SWALL:Q8ZBF7 (EMBL:AJ414157) (392 aa) fasta scores: E(): 3.9e-100, 72.65% id in 362 aa, and to Escherichia coli PhnI SWALL:PHNI_ECOLI (SWALL:P16687) (354 aa) fasta scores: E(): 8.5e-95, 69.46% id in 357 aa; phosphonate metabolism protein 568499 phnI 2885733 phnI Pectobacterium atrosepticum SCRI1043 phosphonate metabolism protein YP_048610.1 567396 D 218491 CDS YP_048611.1 50119444 2885734 568499..569425 1 NC_004547.2 Similar to Escherichia coli O6 PhnJ protein SWALL:AAN83528 (EMBL:AE016771) (309 aa) fasta scores: E(): 1.3e-93, 75.8% id in 310 aa, and to Escherichia coli PhnJ protein SWALL:PHNJ_ECOLI (SWALL:P16688) (281 aa) fasta scores: E(): 6.9e-93, 82.84% id in 274 aa; phosphonate metabolism protein 569425 phnJ 2885734 phnJ Pectobacterium atrosepticum SCRI1043 phosphonate metabolism protein YP_048611.1 568499 D 218491 CDS YP_048612.1 50119445 2883998 569422..570210 1 NC_004547.2 Similar to Escherichia coli phosphonates transport ATP-binding protein PhnK SWALL:PHNK_ECOLI (SWALL:P16678) (252 aa) fasta scores: E(): 6.3e-69, 76.77% id in 254 aa.; phosphonate C-P lyase system protein PhnK 570210 phnK 2883998 phnK Pectobacterium atrosepticum SCRI1043 phosphonate C-P lyase system protein PhnK YP_048612.1 569422 D 218491 CDS YP_048613.1 50119446 2883999 570232..570948 1 NC_004547.2 Similar to Escherichia coli phosphonates transport ATP-binding protein phnl phnl or b4096 SWALL:PHNL_ECOLI (SWALL:P16679) (226 aa) fasta scores: E(): 2.6e-55, 65.77% id in 225 aa; phosphonate ABC transporter ATP-binding protein 570948 phnL 2883999 phnL Pectobacterium atrosepticum SCRI1043 phosphonate ABC transporter ATP-binding protein YP_048613.1 570232 D 218491 CDS YP_048614.1 50119447 2884000 570938..572074 1 NC_004547.2 Similar to Escherichia coli PhnM SWALL:PHNM_ECOLI (SWALL:P16689) (378 aa) fasta scores: E(): 5.3e-94, 62.96% id in 378 aa; phosphonate metabolism protein 572074 phnM 2884000 phnM Pectobacterium atrosepticum SCRI1043 phosphonate metabolism protein YP_048614.1 570938 D 218491 CDS YP_048615.1 50119448 2883950 572077..572643 1 NC_004547.2 Similar to Escherichia coli ATP-binding protein PhnN or b4094 SWALL:PHNN_ECOLI (SWALL:P16690) (185 aa) fasta scores: E(): 2.1e-29, 51.97% id in 177 aa; ribose 1,5-bisphosphokinase 572643 phnN 2883950 phnN Pectobacterium atrosepticum SCRI1043 ribose 1,5-bisphosphokinase YP_048615.1 572077 D 218491 CDS YP_048616.1 50119449 2883951 572685..573470 1 NC_004547.2 required for the use of phosphonates and phosphite as phosphorus sources; carbon-phosphorus lyase complex accessory protein 573470 phnP 2883951 phnP Pectobacterium atrosepticum SCRI1043 carbon-phosphorus lyase complex accessory protein YP_048616.1 572685 D 218491 CDS YP_048617.1 50119450 2882359 574080..575378 1 NC_004547.2 Similar to Escherichia coli colanic biosynthesis UDP-glucose lipid carrier transferase WcaJ or b2047 SWALL:WCAJ_ECOLI (SWALL:P71241) (464 aa) fasta scores: E(): 6.8e-69, 43.62% id in 463 aa, and to Klebsiella pneumoniae probable CPS biosynthesis glycosyltransferase SWALL:YC14_KLEPN (SWALL:Q48460) (465 aa) fasta scores: E(): 1e-69, 43.95% id in 455 aa; capsular polysaccharide biosynthesis protein 575378 wcaJ 2882359 wcaJ Pectobacterium atrosepticum SCRI1043 capsular polysaccharide biosynthesis protein YP_048617.1 574080 D 218491 CDS YP_048618.1 50119451 2884817 575368..576654 1 NC_004547.2 Similar to Methylobacillus sp. 12S EpsL epsL SWALL:BAC55133 (EMBL:AB062506) (401 aa) fasta scores: E(): 4, 20.86% id in 393 aa, and to Vibrio vulnificus conserved hypothetical protein vv12303 SWALL:AAO10679 (EMBL:AE016804) (416 aa) fasta scores: E(): 4e-82, 46.98% id in 415 aa; capsular polysaccharide biosynthesis protein 576654 2884817 ECA0500 Pectobacterium atrosepticum SCRI1043 capsular polysaccharide biosynthesis protein YP_048618.1 575368 D 218491 CDS YP_048619.1 50119452 2884818 576656..577213 1 NC_004547.2 Similar to Vibrio vulnificus polysaccharide export-related protein vv12304 SWALL:AAO10680 (EMBL:AE016804) (174 aa) fasta scores: E(): 5.2e-31, 53.61% id in 166 aa, and to Brucella suis capsule polysaccharide export protein, br0783 SWALL:AAN29712 (EMBL:AE014383) (195 aa) fasta scores: E(): 5.5e-18, 37.91% id in 182 aa; capsular polysaccharide export protein 577213 2884818 ECA0501 Pectobacterium atrosepticum SCRI1043 capsular polysaccharide export protein YP_048619.1 576656 D 218491 CDS YP_048620.1 50119453 2885743 577216..579348 1 NC_004547.2 Similar to Rhizobium leguminosarum exopolysaccharide polymerization protein PssP SWALL:O85453 (EMBL:AF067140) (746 aa) fasta scores: E(): 8.1e-10, 23.42% id in 730 aa, and to Vibrio cholerae exopolysaccharide biosynthesis protein, vc0937 SWALL:Q9KTG5 (EMBL:AE004176) (737 aa) fasta scores: E(): 1.4e-44, 28.87% id in 717 aa; capsulatr polysaccharide biosynthesis protein 579348 2885743 ECA0502 Pectobacterium atrosepticum SCRI1043 capsulatr polysaccharide biosynthesis protein YP_048620.1 577216 D 218491 CDS YP_048621.1 50119454 2885744 579362..580573 1 NC_004547.2 Similar to Rhizobium meliloti succinoglycan biosynthesis transport protein ExoT or rb1074 or smb20950 SWALL:EXOT_RHIME (SWALL:P33699) (494 aa) fasta scores: E(): 0.042, 19.1% id in 335 aa, and to Vibrio vulnificus hypothetical protein vv12306 SWALL:AAO10682 (EMBL:AE016804) (411 aa) fasta scores: E(): 1e-94, 57.56% id in 403 aa, and to Staphylococcus aureus Cap8K SWALL:P72377 (EMBL:U73374) (412 aa) fasta scores: E(): 2.9e-09, 19.75% id in 400 aa; capsular polysaccharide biosynthesis protein 580573 2885744 ECA0503 Pectobacterium atrosepticum SCRI1043 capsular polysaccharide biosynthesis protein YP_048621.1 579362 D 218491 CDS YP_048622.1 50119455 2885745 580570..581952 1 NC_004547.2 Similar to Streptococcus agalactiae CpsH or cpsiaH SWALL:Q8VL36 (EMBL:AF332914) (379 aa) fasta scores: E(): 0.76, 18.88% id in 360 aa, and to Vibrio vulnificus hypothetical protein vv12307 SWALL:AAO10683 (EMBL:AE016804) (466 aa) fasta scores: E(): 7.4e-117, 61.31% id in 455 aa; capsular polysaccharide biosynthesis protein 581952 2885745 ECA0504 Pectobacterium atrosepticum SCRI1043 capsular polysaccharide biosynthesis protein YP_048622.1 580570 D 218491 CDS YP_048623.1 50119456 2885703 581945..582934 1 NC_004547.2 Similar to Vibrio vulnificus glycosyltransferase protein vv12308 SWALL:AAO10684 (EMBL:AE016804) (332 aa) fasta scores: E(): 7.6e-86, 64.81% id in 324 aa, and to Rhizobium meliloti glycosyltransferase protein rb1330 or smb21500 SWALL:Q92U13 (EMBL:AL603646) (347 aa) fasta scores: E(): 5.2e-37, 37.42% id in 326 aa; capsular polysaccharide biosynthesis glycosyl transferase 582934 2885703 ECA0505 Pectobacterium atrosepticum SCRI1043 capsular polysaccharide biosynthesis glycosyl transferase YP_048623.1 581945 D 218491 CDS YP_048624.1 50119457 2885704 582944..584155 1 NC_004547.2 Similar to Klebsiella pneumoniae WbdC SWALL:Q9RMT8 (EMBL:AF189151) (274 aa) fasta scores: E(): 8.9e-10, 28.04% id in 246 aa, and to Vibrio vulnificus glycosyltransferase protein vv12309 SWALL:AAO10685 (EMBL:AE016804) (401 aa) fasta scores: E(): 5e-95, 60% id in 400 aa; capsular polysaccharide biosynthesis glycosyl transferase 584155 2885704 ECA0506 Pectobacterium atrosepticum SCRI1043 capsular polysaccharide biosynthesis glycosyl transferase YP_048624.1 582944 D 218491 CDS YP_048625.1 50119458 2885705 584157..585260 1 NC_004547.2 Similar to Shigella boydii glycosyl transferase wbdS SWALL:Q93CU5 (EMBL:AF402312) (351 aa) fasta scores: E(): 7.8e-11, 23.69% id in 363 aa, and to Vibrio vulnificus glycosyltransferase protein vv12310 SWALL:AAO10686 (EMBL:AE016804) (368 aa) fasta scores: E(): 3.5e-94, 66.85% id in 362 aa; capsular polysaccharide biosynthesis glycosyl transferase 585260 2885705 ECA0507 Pectobacterium atrosepticum SCRI1043 capsular polysaccharide biosynthesis glycosyl transferase YP_048625.1 584157 D 218491 CDS YP_048626.1 50119459 2883809 585284..585691 1 NC_004547.2 Similar to Vibrio vulnificus hypothetical protein vv12311 SWALL:AAO10687 (EMBL:AE016804) (134 aa) fasta scores: E(): 1e-16, 45.92% id in 135 aa.; hypothetical protein 585691 2883809 ECA0508 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048626.1 585284 D 218491 CDS YP_048627.1 50119460 2883810 585730..587124 1 NC_004547.2 Similar to Vibrio vulnificus hypothetical protein vv12312 SWALL:AAO10688 (EMBL:AE016804) (492 aa) fasta scores: E(): 5.5e-105, 53.91% id in 447 aa. No other significant database matches.; hypothetical protein 587124 2883810 ECA0509 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048627.1 585730 D 218491 CDS YP_048628.1 50119461 2883811 587151..587651 1 NC_004547.2 Similar to Escherichia coli k30 capsule biosynthesis cluster, partial sequence SWALL:Q9X4C2 (EMBL:AF104912) (172 aa) fasta scores: E(): 2.1e-15, 36.74% id in 166 aa, and to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri colanic acid biosynthesis acetyltransferase WcaB or b2058 or z3222 or ecs2863 or sf2122 SWALL:WCAB_ECOLI (SWALL:P77558) (162 aa) fasta scores: E(): 1.8e-14, 40% id in 150 aa; capsular polysacharide biosynthesis transferase 587651 2883811 ECA0510 Pectobacterium atrosepticum SCRI1043 capsular polysacharide biosynthesis transferase YP_048628.1 587151 D 218491 CDS YP_048629.1 50119462 2881351 complement(588090..588308) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 CcdA protein CcdA or LetA or protein H SWALL:CCDA_ECOLI (SWALL:P05702) (72 aa) fasta scores: E(): 2.8e-10, 53.52% id in 71 aa, and to Shigella flexneri, and Shigella flexneri 2a CcdA protein CcdA SWALL:Q99Q95 (EMBL:AL391753) (72 aa) fasta scores: E(): 5.2e-11, 53.52% id in 71 aa; plasmid maintenance protein CcdA 588308 ccdA1 2881351 ccdA1 Pectobacterium atrosepticum SCRI1043 plasmid maintenance protein CcdA YP_048629.1 588090 R 218491 CDS YP_048630.1 50119463 2883681 complement(588326..588568) 1 NC_004547.2 Similar to Rhizobium loti hypothetical protein Msr0960 SWALL:Q98LM9 (EMBL:AP002996) (83 aa) fasta scores: E(): 5.9e-06, 43.93% id in 66 aa; hypothetical protein 588568 2883681 ECA0512 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048630.1 588326 R 218491 CDS YP_048631.1 50119464 2883682 588670..588912 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri sugar fermentation stimulation protein B SfsB or Nlp or sfs7 or b3188 or c3946 or z4551 or ecs4067 or sf3228 SWALL:SFSB_ECOLI (SWALL:P18837) (92 aa) fasta scores: E(): 5.5e-15, 71.87% id in 64 aa, and to Bacteriophage Mu DNA-binding protein Ner or CII or 2 SWALL:NER_BPMU (SWALL:P06020) (74 aa) fasta scores: E(): 3.8e-13, 64.61% id in 65 aa. Also similar to ECA0686 (71.233% id. in 73 aa overlap), and to ECA0966 (91.139% id. in 79 aa overlap), and to ECA3206 (82.857% id. in 70 aa overlap.); phage transcriptional regulator 588912 2883682 ECA0513 Pectobacterium atrosepticum SCRI1043 phage transcriptional regulator YP_048631.1 588670 D 218491 CDS YP_048632.1 50119465 2883683 589060..589218 1 NC_004547.2 No significant database matches.Possible false CDS.; hypothetical protein 589218 2883683 ECA0514 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048632.1 589060 D 218491 CDS YP_048633.1 50119466 2884183 589365..590507 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo0874 SWALL:AAM86806 (EMBL:AJ414145) (380 aa) fasta scores: E(): 7.1e-116, 75.26% id in 380 aa; hypothetical protein 590507 2884183 ECA0515 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048633.1 589365 D 218491 CDS YP_048634.1 50119467 2884184 590844..591731 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty4521 SWALL:Q8Z1M3 (EMBL:AL627282) (344 aa) fasta scores: E(): 1.8e-79, 73.03% id in 293 aa; hypothetical protein 591731 2884184 ECA0516 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048634.1 590844 D 218491 CDS YP_048635.1 50119468 2884185 591724..592413 1 NC_004547.2 Weakly similar to Vibrio cholerae hypothetical protein Vc1703 SWALL:Q9KRD9 (EMBL:AE004248) (163 aa) fasta scores: E(): 5.4, 23.47% id in 115 aa, and to Trypanosoma cruzi ATPase SWALL:Q9BJX3 (EMBL:AF324829) (201 aa) fasta scores: E(): 8.8, 25.73% id in 171 aa; hypothetical protein 592413 2884185 ECA0517 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048635.1 591724 D 218491 CDS YP_048636.1 50119469 2882920 592410..592802 1 NC_004547.2 No significant database matches. Possible false CDS.; hypothetical protein 592802 2882920 ECA0518 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048636.1 592410 D 218491 CDS YP_048637.1 50119470 2882921 592768..594162 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri replicative DNA helicase DnaB or GroP or GrpA or b4052 or sf4154 SWALL:DNAB_ECOLI (SWALL:P03005) (471 aa) fasta scores: E(): 1.8e-87, 54.5% id in 455 aa; replicative DNA helicase 594162 2882921 ECA0519 Pectobacterium atrosepticum SCRI1043 replicative DNA helicase YP_048637.1 592768 D 218491 CDS YP_048638.1 50119471 2882922 594162..595886 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty4523 SWALL:Q8Z1M1 (EMBL:AL627282) (599 aa) fasta scores: E(): 7.4e-73, 50.24% id in 609 aa; hypothetical protein 595886 2882922 ECA0520 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048638.1 594162 D 218491 CDS YP_048639.1 50119472 2882826 595890..596162 1 NC_004547.2 No significant database matches. Possible false CDS.; hypothetical protein 596162 2882826 ECA0521 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048639.1 595890 D 218491 CDS YP_048640.1 50119473 2882827 596187..596801 1 NC_004547.2 Similar to Yersinia pestis orf 77 ypo1902 or y2407 SWALL:Q9Z381 (EMBL:AL031866) (193 aa) fasta scores: E(): 3.1e-19, 37.27% id in 169 aa, and to Salmonella typhi hypothetical protein sty4526 SWALL:Q8Z1L8 (EMBL:AL627282) (185 aa) fasta scores: E(): 1.3e-32, 51.14% id in 174 aa; hypothetical protein 596801 2882827 ECA0522 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048640.1 596187 D 218491 CDS YP_048641.1 50119474 2882828 596810..597064 1 NC_004547.2 hypothetical protein 597064 2882828 ECA0522A Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048641.1 596810 D 218491 CDS YP_048642.1 50119475 2882341 597237..598433 1 NC_004547.2 Similar to Pseudomonas aeruginosa conserved hypothetical protein SWALL:AAN62321 (EMBL:AF440524) (387 aa) fasta scores: E(): 2.7e-25, 31.73% id in 375 aa, and to Salmonella typhi hypothetical protein Sty4528 sty4528 SWALL:Q8Z1L7 (EMBL:AL627282) (447 aa) fasta scores: E(): 3.9e-52, 46.35% id in 384 aa; hypothetical protein 598433 2882341 ECA0523 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048642.1 597237 D 218491 CDS YP_048643.1 50119476 2882342 598803..599600 1 NC_004547.2 Similar to Pseudomonas aeruginosa conserved hypothetical protein SWALL:AAN62197 (EMBL:AF440523) (263 aa) fasta scores: E(): 4e-15, 31.71% id in 227 aa, and to Salmonella typhi hypothetical protein Sty4529 sty4529 SWALL:Q8Z1L6 (EMBL:AL627282) (259 aa) fasta scores: E(): 5.5e-35, 46.22% id in 225 aa; hypothetical protein 599600 2882342 ECA0524 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048643.1 598803 D 218491 CDS YP_048644.1 50119477 2884262 599597..601615 1 NC_004547.2 decatenates replicating daughter chromosomes; DNA topoisomerase III 601615 topB 2884262 topB Pectobacterium atrosepticum SCRI1043 DNA topoisomerase III YP_048644.1 599597 D 218491 CDS YP_048645.1 50119478 2882343 complement(601919..602095) 1 NC_004547.2 Similar to Bacteriophage Mx8 p84 SWALL:Q94MN5 (EMBL:AF396866) (57 aa) fasta scores: E(): 2.3, 30.61% id in 49 aa.; hypothetical protein 602095 2882343 ECA0526 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048645.1 601919 R 218491 CDS YP_048646.1 50119479 2882268 complement(602138..602293) 1 NC_004547.2 No significant database matches.; hypothetical protein 602293 2882268 ECA0527 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048646.1 602138 R 218491 CDS YP_048647.1 50119480 2882269 602464..602955 1 NC_004547.2 Similar to Pseudomonas aeruginosa conserved hypothetical protein SWALL:AAN62175 (EMBL:AF440523) (332 aa) fasta scores: E(): 3.1e-14, 35.61% id in 146 aa, and to Salmonella typhi hypothetical protein Sty4534 SWALL:Q8Z1L5 (EMBL:AL627282) (149 aa) fasta scores: E(): 8.8e-33, 61.22% id in 147 aa; hypothetical protein 602955 2882269 ECA0528 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048647.1 602464 D 218491 CDS YP_048648.1 50119481 2882377 603654..604091 1 NC_004547.2 Similar to Ralstonia solanacearum orf c8 SWALL:O82963 (EMBL:AB015669) (143 aa) fasta scores: E(): 3.1e-33, 64.49% id in 138 aa, and to Synechocystis sp. hypothetical protein Sll1692 SWALL:P73707 (EMBL:D90908) (145 aa) fasta scores: E(): 2.4e-17, 38.29% id in 141 aa; plasmid-like protein 604091 2882377 ECA0531 Pectobacterium atrosepticum SCRI1043 plasmid-like protein YP_048648.1 603654 D 218491 CDS YP_048649.1 50119482 2883691 604237..605553 1 NC_004547.2 Similar to Salmonella dublin, and Salmonella typhi PilL SWALL:Q9K334 (EMBL:AF247502) (414 aa) fasta scores: E(): 8.9e-32, 44.98% id in 449 aa, and to Yersinia pseudotuberculosis PilL SWALL:Q8KR32 (EMBL:AY047316) (356 aa) fasta scores: E(): 3.8e-31, 42.72% id in 440 aa; type IV pilus protein 605553 pilL 2883691 pilL Pectobacterium atrosepticum SCRI1043 type IV pilus protein YP_048649.1 604237 D 218491 CDS YP_048650.1 50119483 2883692 605553..605999 1 NC_004547.2 Similar to Escherichia coli, and Salmonella typhimurium PilM protein SWALL:O07371 (EMBL:AB021078) (145 aa) fasta scores: E(): 2.4e-05, 29.45% id in 146 aa.; type IV pilus protein 605999 pilM 2883692 pilM Pectobacterium atrosepticum SCRI1043 type IV pilus protein YP_048650.1 605553 D 218491 CDS YP_048651.1 50119484 2883654 606013..607677 1 NC_004547.2 Similar to Escherichia coli, and Salmonella typhimurium lipoprotein PilN SWALL:O07372 (EMBL:AB021078) (560 aa) fasta scores: E(): 8.1e-61, 40.71% id in 560 aa; type IV pilus protein 607677 pilN 2883654 pilN Pectobacterium atrosepticum SCRI1043 type IV pilus protein YP_048651.1 606013 D 218491 CDS YP_048652.1 50119485 2883656 608990..609487 1 NC_004547.2 Similar to Escherichia coli PilP protein SWALL:Q9F535 (EMBL:AP002527) (171 aa) fasta scores: E(): 0.12, 23.75% id in 160 aa, and to Salmonella typhi, and Salmonella dublin PilP SWALL:Q9RHF2 (EMBL:AF000001) (156 aa) fasta scores: E(): 0.21, 25.67% id in 148 aa.; type IV pilus protein 609487 pilP 2883656 pilP Pectobacterium atrosepticum SCRI1043 type IV pilus protein YP_048652.1 608990 D 218491 CDS YP_048653.1 50119486 2883657 609487..611046 1 NC_004547.2 Similar to Escherichia coli, and Salmonella typhimurium nucleotide-binding protein PilQ SWALL:O07375 (EMBL:AB021078) (517 aa) fasta scores: E(): 2.7e-42, 32.67% id in 508 aa, and to Yersinia pseudotuberculosis nucleotide-binding protein PilQ SWALL:Q8KR27 (EMBL:AY047316) (517 aa) fasta scores: E(): 4.4e-46, 33.99% id in 506 aa; type IV pilus nucleotide-binding protein 611046 pilQ 2883657 pilQ Pectobacterium atrosepticum SCRI1043 type IV pilus nucleotide-binding protein YP_048653.1 609487 D 218491 CDS YP_048654.1 50119487 2882378 611015..611167 1 NC_004547.2 Doubtful CDS. No significant database matches.; hypothetical protein 611167 2882378 ECA0539 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048654.1 611015 D 218491 CDS YP_048655.1 50119488 2883651 611178..612215 1 NC_004547.2 Similar to Escherichia coli, and Salmonella typhimurium integral membrane protein PilR SWALL:O07376 (EMBL:AB021078) (365 aa) fasta scores: E(): 7.1e-24, 29.68% id in 347 aa, and to Yersinia pseudotuberculosis integral membrane protein PilR SWALL:Q8KR26 (EMBL:AY047316) (369 aa) fasta scores: E(): 5.5e-23, 30.2% id in 341 aa; type IV pilus protein 612215 pilR 2883651 pilR Pectobacterium atrosepticum SCRI1043 type IV pilus protein YP_048655.1 611178 D 218491 CDS YP_048656.1 50119489 2883652 612271..612876 1 NC_004547.2 Similar to Yersinia pseudotuberculosis type IV prepilin PilS SWALL:Q8KR25 (EMBL:AY047316) (195 aa) fasta scores: E(): 1.2e-05, 31.84% id in 179 aa, and to Escherichia coli type IV prepilin PilS SWALL:O88170 (EMBL:AB007463) (204 aa) fasta scores: E(): 0.013, 29.05% id in 179 aa.; type IV pilus prepilin 612876 pilS 2883652 pilS Pectobacterium atrosepticum SCRI1043 type IV pilus prepilin YP_048656.1 612271 D 218491 CDS YP_048657.1 50119490 2883653 612883..613401 1 NC_004547.2 Similar to Salmonella typhi, and Salmonella dublin PilT protein PilT or sty4548 SWALL:Q9ZIU8 (EMBL:AF000001) (158 aa) fasta scores: E(): 2.3e-28, 55.07% id in 138 aa, and to Escherichia coli, and Salmonella typhimurium PilT protein PilT SWALL:O07378 (EMBL:AB021078) (186 aa) fasta scores: E(): 7.9e-28, 45.88% id in 170 aa; type IV pilus protein 613401 pilT 2883653 pilT Pectobacterium atrosepticum SCRI1043 type IV pilus protein YP_048657.1 612883 D 218491 CDS YP_048658.1 50119491 2883575 613398..614057 1 NC_004547.2 Similar to Shigella sonnei prepilin peptidase PilU SWALL:Q9R2J4 (EMBL:AB021078) (218 aa) fasta scores: E(): 0.029, 26.33% id in 224 aa, and to Salmonella typhimurium prepilin peptidase pPilU SWALL:O07379 (EMBL:AB027308) (218 aa) fasta scores: E(): 0.025, 26.33% id in 224 aa; prepilin peptidase 614057 pilU 2883575 pilU Pectobacterium atrosepticum SCRI1043 prepilin peptidase YP_048658.1 613398 D 218491 CDS YP_048659.1 50119492 2883576 614071..615465 1 NC_004547.2 Similar to Escherichia coli PilV protein PilV SWALL:Q04905 (EMBL:X62169) (417 aa) fasta scores: E(): 8.8e-12, 32.47% id in 428 aa, and to Salmonella typhi PilV or sty4550 or t4250 SWALL:O51801 (EMBL:AF000001) (435 aa) fasta scores: E(): 7.5e-13, 26.49% id in 453 aa; type IV pilus prepilin protein 615465 pilV 2883576 pilV Pectobacterium atrosepticum SCRI1043 type IV pilus prepilin protein YP_048659.1 614071 D 218491 CDS YP_048660.1 50119493 2882379 <615469..615948 1 NC_004547.2 Similar to the C-terminal region of Escherichia coli PilV SWALL:AAL18837 (EMBL:AY258503) (454 aa) fasta scores: E(): 6.6e-10, 36.3% id in 157 aa, and to Salmonella typhi probable variable tail fibre protein sty3691 SWALL:Q8Z343 (EMBL:AL627279) (504 aa) fasta scores: E(): 1.5e-13, 39.58% id in 144 aa; alternative C-terminus for the PilV protein (fragment) 615948 2882379 ECA0545 Pectobacterium atrosepticum SCRI1043 alternative C-terminus for the PilV protein (fragment) YP_048660.1 <615469 D 218491 CDS YP_048661.1 50119494 2882420 complement(<615967..>616182) 1 NC_004547.2 Similar to Escherichia coli shufflon protein c' SWALL:SHU6_ECOLI (SWALL:P09750) (433 aa) fasta scores: E(): 5e-10, 44.15% id in 77 aa, and to Escherichia coli PilV protein pilV SWALL:Q04905 (EMBL:X62169) (417 aa) fasta scores: E(): 5.7e-10, 43.42% id in 76 aa; alternative C-terminus for the PilV protein (fragment) >616182 2882420 ECA0545A Pectobacterium atrosepticum SCRI1043 alternative C-terminus for the PilV protein (fragment) YP_048661.1 <615967 R 218491 CDS YP_048662.1 50119495 2884517 616235..617362 1 NC_004547.2 Similar to Escherichia coli shufflon-specific DNA recombinase Rci SWALL:RCI1_ECOLI (SWALL:P10487) (384 aa) fasta scores: E(): 4.8e-91, 64.36% id in 376 aa; shufflon-specific DNA recombinase 617362 rci 2884517 rci Pectobacterium atrosepticum SCRI1043 shufflon-specific DNA recombinase YP_048662.1 616235 D 218491 CDS YP_048663.1 50119496 2882421 617411..617902 1 NC_004547.2 Similar to Salmonella typhi exported protein PilK or sty4553 SWALL:Q8Z1K9 (EMBL:AL627282) (155 aa) fasta scores: E(): 2.2e-21, 45.2% id in 146 aa; hypothetical protein 617902 2882421 ECA0547 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048663.1 617411 D 218491 CDS YP_048664.1 50119497 2884254 618090..618890 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein sty4554 or t4254 SWALL:Q8Z1K8 (EMBL:AL627282) (291 aa) fasta scores: E(): 1.3e-28, 36.89% id in 290 aa, and to Salmonella typhimurium TraE protein traE SWALL:Q9R2H6 (EMBL:AB027308) (274 aa) fasta scores: E(): 0.00014, 23.13% id in 268 aa; plasmid transfer protein 618890 traE 2884254 traE Pectobacterium atrosepticum SCRI1043 plasmid transfer protein YP_048664.1 618090 D 218491 CDS YP_048665.1 50119498 2884255 619034..620236 1 NC_004547.2 Similar to Shigella sonnei TraF protein SWALL:Q9Z4A1 (EMBL:AB021078) (400 aa) fasta scores: E(): 2.9e-81, 55% id in 400 aa, and to Salmonella typhimurium TraF protein SWALL:Q9R2H5 (EMBL:AB027308) (400 aa) fasta scores: E(): 3.4e-81, 54.75% id in 400 aa, and to Escherichia fergusonii TraF SWALL:Q8KR61 (EMBL:AY046057) (401 aa) fasta scores: E(): 1e-61, 44.52% id in 402 aa; plasmid transfer protein 620236 traF 2884255 traF Pectobacterium atrosepticum SCRI1043 plasmid transfer protein YP_048665.1 619034 D 218491 CDS YP_048666.1 50119499 2882422 620303..620752 1 NC_004547.2 Similar to Proteus vulgaris hypothetical protein orf267 SWALL:Q8KJV9 (EMBL:AP004237) (138 aa) fasta scores: E(): 6.8e-24, 57.46% id in 134 aa, and to Pseudomonas resinovorans hypothetical protein SWALL:Q8GHW2 (EMBL:AB088420) (169 aa) fasta scores: E(): 3.9e-05, 39.17% id in 97 aa; plasmid protein 620752 2882422 ECA0550 Pectobacterium atrosepticum SCRI1043 plasmid protein YP_048666.1 620303 D 218491 CDS YP_048667.1 50119500 2881401 620819..621118 1 NC_004547.2 Similar to Oceanobacillus iheyensis hypothetical protein ob2071 SWALL:BAC14027 (EMBL:AP004599) (161 aa) fasta scores: E(): 1.4, 27.83% id in 97 aa; hypothetical protein 621118 2881401 ECA0551 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048667.1 620819 D 218491 CDS YP_048668.1 50119501 2881402 621156..621848 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein sty1595 SWALL:Q8Z6W9 (EMBL:AL627270) (227 aa) fasta scores: E(): 1.4e-26, 38.49% id in 226 aa.; hypothetical protein 621848 2881402 ECA0552 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048668.1 621156 D 218491 CDS YP_048669.1 50119502 2881403 621946..622320 1 NC_004547.2 No significant database matches.; hypothetical protein 622320 2881403 ECA0553 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048669.1 621946 D 218491 CDS YP_048670.1 50119503 2881816 622423..623298 1 NC_004547.2 Similar to Salmonella typhi membrane protein sty4557 SWALL:Q8Z1K7 (EMBL:AL627282) (304 aa) fasta scores: E(): 5e-13, 38.41% id in 315 aa; hypothetical protein 623298 2881816 ECA0554 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048670.1 622423 D 218491 CDS YP_048671.1 50119504 2881817 623308..624021 1 NC_004547.2 Similar to Salmonella typhi exported protein sty4558 SWALL:Q8Z1K6 (EMBL:AL627282) (246 aa) fasta scores: E(): 5.1e-52, 56.46% id in 232 aa; hypothetical protein 624021 2881817 ECA0555 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048671.1 623308 D 218491 CDS YP_048672.1 50119505 2881818 624021..624608 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein sty4559 sty4559 or t4257 SWALL:Q8Z1K5 (EMBL:AL627282) (183 aa) fasta scores: E(): 3.2e-31, 50.28% id in 173 aa, and to Pseudomonas aeruginosa conserved hypothetical protein SWALL:Q8GQ43 (EMBL:AF440523) (196 aa) fasta scores: E(): 1.9e-21, 41.56% id in 166 aa; hypothetical protein 624608 2881818 ECA0556 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048672.1 624021 D 218491 CDS YP_048673.1 50119506 2882145 624609..625130 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein sty4560 SWALL:Q8Z1K4 (EMBL:AL627282) (166 aa) fasta scores: E(): 1.5e-21, 46.1% id in 154 aa.; hypothetical protein 625130 2882145 ECA0557 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048673.1 624609 D 218491 CDS YP_048674.1 50119507 2882146 625127..625744 1 NC_004547.2 Similar to Salmonella typhi membrane protein sty4561 SWALL:Q8Z1K3 (EMBL:AL627282) (189 aa) fasta scores: E(): 4.7e-36, 55.24% id in 181 aa.; hypothetical protein 625744 2882146 ECA0558 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048674.1 625127 D 218491 CDS YP_048675.1 50119508 2882147 625722..626204 1 NC_004547.2 No significant database matches.; hypothetical protein 626204 2882147 ECA0559 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048675.1 625722 D 218491 CDS YP_048676.1 50119509 2881259 626208..628304 1 NC_004547.2 Similar to Proteus vulgaris DNA transfer orf202 SWALL:Q8L280 (EMBL:AP004237) (655 aa) fasta scores: E(): 7.6e-30, 26.78% id in 687 aa, and to Pseudomonas aeruginosa conserved hypothetical protein SWALL:AAN62159 (EMBL:AF440523) (729 aa) fasta scores: E(): 1.3e-165, 62.58% id in 703 aa, and to Providencia rettgeri TraD SWALL:Q8RL14 (EMBL:AY090559) (606 aa) fasta scores: E(): 1.2e-14, 30.74% id in 644 aa; plasmid transfer protein 628304 2881259 ECA0560 Pectobacterium atrosepticum SCRI1043 plasmid transfer protein YP_048676.1 626208 D 218491 CDS YP_048677.1 50119510 2881260 628306..629061 1 NC_004547.2 Similar to Pseudomonas putida hypothetical 27.8 kDa protein SWALL:Q8VMJ4 (EMBL:AJ344068) (249 aa) fasta scores: E(): 1.3e-35, 41.27% id in 252 aa, and to Salmonella typhi membrane protein sty4563 or t4261 SWALL:Q8Z1K1 (EMBL:AL627282) (252 aa) fasta scores: E(): 4.6e-55, 57.95% id in 245 aa, and to Pseudomonas aeruginosa hypothetical protein SWALL:AAN62289 (EMBL:AF440524) (249 aa) fasta scores: E(): 1.2e-34, 39.68% id in 252 aa; hypothetical protein 629061 2881260 ECA0561 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048677.1 628306 D 218491 CDS YP_048678.1 50119511 2881261 629084..629278 1 NC_004547.2 No significant database matches.; hypothetical protein 629278 2881261 ECA0562 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048678.1 629084 D 218491 CDS YP_048679.1 50119512 2881637 complement(629420..629959) 1 NC_004547.2 No significant database matches.; hypothetical protein 629959 2881637 ECA0563 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048679.1 629420 R 218491 CDS YP_048680.1 50119513 2881638 630094..630414 1 NC_004547.2 Similar to Pseudomonas putida transmembrane protein SWALL:Q8VMI7 (EMBL:AJ344068) (123 aa) fasta scores: E(): 1.5e-09, 44.44% id in 99 aa, and to Salmonella typhi hypothetical protein sty4564 sty4564 or t4262 SWALL:Q8Z1K0 (EMBL:AL627282) (90 aa) fasta scores: E(): 2.2e-14, 59.52% id in 84 aa, and to Pseudomonas aeruginosa hypothetical protein SWALL:AAN62149 (EMBL:AF440523) (127 aa) fasta scores: E(): 4.4e-09, 44.11% id in 102 aa; hypothetical protein 630414 2881638 ECA0564 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048680.1 630094 D 218491 CDS YP_048681.1 50119514 2881639 630416..630655 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein SWALL:Q8GPT8 (EMBL:AF440524) (77 aa) fasta scores: E(): 1e-05, 31.16% id in 77 aa, and to Salmonella typhi membrane protein sty4565 or t4263 SWALL:Q8Z1J9 (EMBL:AL627282) (79 aa) fasta scores: E(): 3.5e-12, 46.83% id in 79 aa, and to Pseudomonas putida transmembrane protein SWALL:Q8VMI8 (EMBL:AJ344068) (79 aa) fasta scores: E(): 1.4e-05, 29.11% id in 79 aa; hypothetical protein 630655 2881639 ECA0565 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048681.1 630416 D 218491 CDS YP_048682.1 50119515 2881711 630682..631023 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein SWALL:Q8GPT9 (EMBL:AF440524) (120 aa) fasta scores: E(): 5e-10, 41.59% id in 113 aa, and to Pseudomonas putida hypothetical 12.9 kDa protein SWALL:Q8VMI9 (EMBL:AJ344068) (122 aa) fasta scores: E(): 1.2e-09, 46.8% id in 94 aa; hypothetical protein 631023 2881711 ECA0566 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048682.1 630682 D 218491 CDS YP_048683.1 50119516 2881712 631033..631395 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein SWALL:Q8GPU0 (EMBL:AF440524) (131 aa) fasta scores: E(): 1.1e-07, 37.39% id in 123 aa, and to Xanthomonas axonopodis hypothetical protein Xac2271 SWALL:Q8PKA4 (EMBL:AE011864) (137 aa) fasta scores: E(): 4.4e-08, 37.3% id in 126 aa; hypothetical protein 631395 2881712 ECA0567 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048683.1 631033 D 218491 CDS YP_048684.1 50119517 2881713 631392..632048 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein SWALL:AAN62145 (EMBL:AF440523) (230 aa) fasta scores: E(): 1.5e-46, 53.42% id in 219 aa, and to Salmonella typhi possible exported protein sty4568 or t4265 SWALL:Q8Z1J7 (EMBL:AL627282) (217 aa) fasta scores: E(): 1.1e-66, 72.22% id in 216 aa, and to Pseudomonas putida hypothetical 29.5 kDa protein SWALL:Q8VMJ0 (EMBL:AJ344068) (267 aa) fasta scores: E(): 6.9e-46, 53.67% id in 218 aa; hypothetical protein 632048 2881713 ECA0568 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048684.1 631392 D 218491 CDS YP_048685.1 50119518 2881482 632045..632971 1 NC_004547.2 Similar to Pseudomonas putida hypothetical 31.9 kDa protein SWALL:Q8VMJ1 (EMBL:AJ344068) (302 aa) fasta scores: E(): 2.7e-39, 51.31% id in 267 aa, and to Salmonella typhi hypothetical protein sty4569 or t4266 SWALL:Q8Z1J6 (EMBL:AL627282) (299 aa) fasta scores: E(): 3.2e-55, 57.19% id in 292 aa, and to Pseudomonas aeruginosa hypothetical protein SWALL:AAN62144 (EMBL:AF440523) (303 aa) fasta scores: E(): 4e-41, 45.24% id in 305 aa; hypothetical protein 632971 2881482 ECA0569 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048685.1 632045 D 218491 CDS YP_048686.1 50119519 2881483 632961..634493 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein SWALL:AAN62143 (EMBL:AF440523) (472 aa) fasta scores: E(): 5.8e-46, 41.17% id in 493 aa, and to Salmonella typhi exported protein sty4570 SWALL:Q8Z1J5 (EMBL:AL627282) (492 aa) fasta scores: E(): 5e-67, 54.08% id in 514 aa, and to Pseudomonas putida hypothetical 51.2 kDa protein SWALL:Q8VMJ2 (EMBL:AJ344068) (482 aa) fasta scores: E(): 6.1e-31, 40.14% id in 426 aa; hypothetical protein 634493 2881483 ECA0570 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048686.1 632961 D 218491 CDS YP_048687.1 50119520 2881484 634611..634946 1 NC_004547.2 hypothetical protein 634946 2881484 ECA0571 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048687.1 634611 D 218491 CDS YP_048688.1 50119521 2882088 634939..635349 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein SWALL:AAN62280 (EMBL:AF440524) (139 aa) fasta scores: E(): 2e-22, 52.3% id in 130 aa, and to Salmonella typhi lipoprotein sty4571 or t4267 SWALL:Q8Z1J4 (EMBL:AL627282) (147 aa) fasta scores: E(): 2.2e-28, 61.48% id in 135 aa; lipoprotein 635349 2882088 ECA0572 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_048688.1 634939 D 218491 CDS YP_048689.1 50119522 2882089 635349..638210 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein SWALL:AAN62141 (EMBL:AF440523) (943 aa) fasta scores: E(): 1e-139, 50.22% id in 882 aa, and to Salmonella typhi hypothetical protein sty4573 sty4573 or t4270 SWALL:Q8Z1J2 (EMBL:AL627282) (807 aa) fasta scores: E(): 3.1e-216, 67.64% id in 819 aa, and to Providencia rettgeri TraC SWALL:Q8RKZ1 (EMBL:AY090559) (799 aa) fasta scores: E(): 0.56, 20.93% id in 812 aa; plasmid-like protein 638210 2882089 ECA0573 Pectobacterium atrosepticum SCRI1043 plasmid-like protein YP_048689.1 635349 D 218491 CDS YP_048690.1 50119523 2882090 638207..638653 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty4574 SWALL:Q8Z1J1 (EMBL:AL627282) (128 aa) fasta scores: E(): 5.8e-11, 38.28% id in 128 aa; hypothetical protein 638653 2882090 ECA0574 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048690.1 638207 D 218491 CDS YP_048691.1 50119524 2881931 complement(638755..639189) 1 NC_004547.2 Similar to Saccharomyces cerevisiae hypothetical 15.9 kDa protein ydr100W SWALL:Q03860 (EMBL:Z47746) (143 aa) fasta scores: E(): 0.59, 33.91% id in 115 aa; hypothetical protein 639189 2881931 ECA0575 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048691.1 638755 R 218491 CDS YP_048692.1 50119525 2881932 639329..639733 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein SWALL:AAN62274 (EMBL:AF440524) (145 aa) fasta scores: E(): 9e-09, 39.65% id in 116 aa, and to Salmonella typhi hypothetical protein sty4575 sty4575 or t4272 SWALL:Q8Z1J0 (EMBL:AL627282) (130 aa) fasta scores: E(): 2.6e-19, 46.82% id in 126 aa; hypothetical protein 639733 2881932 ECA0576 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048692.1 639329 D 218491 CDS YP_048693.1 50119526 2881933 639726..640700 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein SWALL:AAN62273 (EMBL:AF440524) (311 aa) fasta scores: E(): 7.4e-40, 49.22% id in 323 aa, and to Salmonella typhi hypothetical protein sty4576 sty4576 or t4273 SWALL:Q8Z1I9 (EMBL:AL627282) (322 aa) fasta scores: E(): 3e-85, 66.77% id in 319 aa; hypothetical protein 640700 2881933 ECA0577 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048693.1 639726 D 218491 CDS YP_048694.1 50119527 2882005 640710..642134 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein SWALL:AAN62272 (EMBL:AF440524) (467 aa) fasta scores: E(): 7.4e-32, 38.82% id in 461 aa, and to Salmonella typhi hypothetical protein sty4577 sty4577 or t4274 SWALL:Q8Z1I8 (EMBL:AL627282) (476 aa) fasta scores: E(): 7.1e-96, 61.5% id in 439 aa; hypothetical protein 642134 2882005 ECA0578 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048694.1 640710 D 218491 CDS YP_048695.1 50119528 2882006 642137..642508 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein SWALL:AAN62271 (EMBL:AF440524) (109 aa) fasta scores: E(): 0.15, 28.18% id in 110 aa, and to Salmonella typhi membrane protein sty4578 or t4275 SWALL:Q8Z1I7 (EMBL:AL627282) (110 aa) fasta scores: E(): 3.9e-11, 38.94% id in 95 aa; hypothetical protein 642508 2882006 ECA0579 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048695.1 642137 D 218491 CDS YP_048696.1 50119529 2882007 642505..644037 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein SWALL:AAN62133 (EMBL:AF440523) (515 aa) fasta scores: E(): 9.4e-85, 42.08% id in 518 aa, and to Salmonella typhi membrane protein sty4579 or t4276 SWALL:Q8Z1I6 (EMBL:AL627282) (501 aa) fasta scores: E(): 7.8e-140, 63.54% id in 502 aa; hypothetical protein 644037 2882007 ECA0580 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048696.1 642505 D 218491 CDS YP_048697.1 50119530 2885075 complement(644070..644459) 1 NC_004547.2 Similar to Salmonella typhi membrane protein sty4580 SWALL:Q8Z1I5 (EMBL:AL627282) (129 aa) fasta scores: E(): 7.1e-07, 30.15% id in 126 aa.; hypothetical protein 644459 2885075 ECA0581 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048697.1 644070 R 218491 CDS YP_048698.1 50119531 2885076 complement(644602..644961) 1 NC_004547.2 Similar to Escherichia coli PemK protein pemK SWALL:PEMK_ECOLI (SWALL:P13976) (133 aa) fasta scores: E(): 3e-07, 33.33% id in 111 aa, and to Plasmid R100 plasmid stable inheritance protein pemK SWALL:BAA78898 (EMBL:AP000342) (133 aa) fasta scores: E(): 3e-07, 33.33% id in 111 aa; plasmid-like protein 644961 2885076 ECA0582 Pectobacterium atrosepticum SCRI1043 plasmid-like protein YP_048698.1 644602 R 218491 CDS YP_048699.1 50119532 2885077 complement(644958..645260) 1 NC_004547.2 Similar to Morganella morganii PemI pemI SWALL:O52204 (EMBL:AF027767) (97 aa) fasta scores: E(): 1.7, 27.55% id in 98 aa, and to Agrobacterium tumefaciens pemi protein pemi or atu0939 or agr_c_1711 SWALL:Q8UGU6 (EMBL:AE009059) (103 aa) fasta scores: E(): 0.1, 28.73% id in 87 aa; plasmid-like protein 645260 2885077 ECA0583 Pectobacterium atrosepticum SCRI1043 plasmid-like protein YP_048699.1 644958 R 218491 CDS YP_048700.1 50119533 2884857 645558..647429 1 NC_004547.2 Similar to Bacillus coagulans restriction enzyme bgci alpha subunit bcgiA SWALL:T4BA_BACCO (SWALL:Q07605) (637 aa) fasta scores: E(): 1.3e-46, 31.12% id in 633 aa, and to Staphylococcus aureus bacteriophage phi-42 hypothetical 72.6 kDa protein SWALL:P95687 (EMBL:X94423) (639 aa) fasta scores: E(): 1.9e-42, 30.78% id in 653 aa; restriction enzyme subunit subunit 647429 2884857 ECA0584 Pectobacterium atrosepticum SCRI1043 restriction enzyme subunit subunit YP_048700.1 645558 D 218491 CDS YP_048701.1 50119534 2884858 647419..648405 1 NC_004547.2 Similar to Bacillus coagulans restriction enzyme bgci beta subunit BcgiB SWALL:T4BB_BACCO (SWALL:Q07606) (341 aa) fasta scores: E(): 3.2e-05, 24.05% id in 345 aa, and to Pseudomonas syringae conserved domain protein pspto0285 SWALL:Q88AU8 (EMBL:AE016856) (360 aa) fasta scores: E(): 0.035, 23.75% id in 320 aa; restriction enzyme subunit beta 648405 2884858 ECA0585 Pectobacterium atrosepticum SCRI1043 restriction enzyme subunit beta YP_048701.1 647419 D 218491 CDS YP_048702.1 50119535 2884859 648538..648678 1 NC_004547.2 No significant database matches.; hypothetical protein 648678 2884859 ECA0586 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048702.1 648538 D 218491 CDS YP_048703.1 50119536 2884649 648731..648898 1 NC_004547.2 Similar to the C-terminal region of Methanobacterium thermoautotrophicum conserved protein mth1804 SWALL:O27832 (EMBL:AE000934) (143 aa) fasta scores: E(): 2.1, 40% id in 50 aa; hypothetical protein 648898 2884649 ECA0586A Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048703.1 648731 D 218491 CDS YP_048704.1 50119537 2884650 649514..650404 1 NC_004547.2 Similar to Yersinia pestis DNA-binding prophage protein ypo1092 SWALL:Q8ZH21 (EMBL:AJ414146) (298 aa) fasta scores: E(): 4.4e-48, 48.79% id in 291 aa, and to Salmonella typhi hypothetical protein sty4586 SWALL:Q8Z1I0 (EMBL:AL627282) (306 aa) fasta scores: E(): 3e-46, 46.57% id in 292 aa, and to Salmonella typhimurium integrase stm2760 SWALL:Q8ZMP4 (EMBL:AE008825) (291 aa) fasta scores: E(): 9.7e-46, 46.07% id in 293 aa.; hypothetical protein 650404 2884650 ECA0587 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048704.1 649514 D 218491 CDS YP_048705.1 50119538 2884651 complement(650412..650702) 1 NC_004547.2 Similar to Citrobacter freundii hypothetical protein orf3 SWALL:AAN87633 (EMBL:AF550415) (106 aa) fasta scores: E(): 3.3e-09, 38.46% id in 91 aa, and to Proteus vulgaris hypothetical protein orf45 SWALL:Q8KK91 (EMBL:AP004237) (99 aa) fasta scores: E(): 3.5e-05, 34.48% id in 87 aa, and to Salmonella typhimurium YdeA protein ydeA SWALL:Q8L240 (EMBL:AP005147) (196 aa) fasta scores: E(): 0.0055, 32.55% id in 86 aa; plasmid-like protein 650702 2884651 ECA0588 Pectobacterium atrosepticum SCRI1043 plasmid-like protein YP_048705.1 650412 R 218491 CDS YP_048706.1 50119539 2885750 651097..651408 1 NC_004547.2 No significant database matches.; hypothetical protein 651408 2885750 ECA0589 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048706.1 651097 D 218491 CDS YP_048707.1 50119540 2885751 651458..651814 1 NC_004547.2 No significant database matches.; hypothetical protein 651814 2885751 ECA0590 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048707.1 651458 D 218491 CDS YP_048708.1 50119541 2885752 651896..652369 1 NC_004547.2 No significant database matches.; hypothetical protein 652369 2885752 ECA0591 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048708.1 651896 D 218491 CDS YP_048709.1 50119542 2885753 652458..652862 1 NC_004547.2 No significant database matches.; hypothetical protein 652862 2885753 ECA0592 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048709.1 652458 D 218491 CDS YP_048710.1 50119543 2885754 653073..653486 1 NC_004547.2 Similar to Vibrio cholerae DNA repair protein RadC homolog SWALL:RADC_VIBCH (SWALL:Q9KVC9) (224 aa) fasta scores: E(): 2.2e-28, 55.47% id in 137 aa, and to Escherichia coli DNA repair protein RadC SWALL:RADC_ECOLI (SWALL:P25531) (222 aa) fasta scores: E(): 2.4e-26, 50.38% id in 129 aa.; DNA repair protein 653486 2885754 ECA0593 Pectobacterium atrosepticum SCRI1043 DNA repair protein YP_048710.1 653073 D 218491 CDS YP_048711.1 50119544 2885755 653663..654259 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein sty4589 SWALL:Q8Z1H7 (EMBL:AL627282) (194 aa) fasta scores: E(): 1.3e-17, 35.02% id in 197 aa. No other significant database matches.; hypothetical protein 654259 2885755 ECA0594 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048711.1 653663 D 218491 CDS YP_048712.1 50119545 2885706 654256..654528 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein sty4590 SWALL:Q8Z1H6 (EMBL:AL627282) (98 aa) fasta scores: E(): 1.4e-11, 46.31% id in 95 aa. No other significant database matches.; hypothetical protein 654528 2885706 ECA0595 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048712.1 654256 D 218491 CDS YP_048713.1 50119546 2885707 654599..655084 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein sty4591 SWALL:Q8Z1H5 (EMBL:AL627282) (152 aa) fasta scores: E(): 2.2e-30, 55.84% id in 154 aa. No other significant database matches.; hypothetical protein 655084 2885707 ECA0596 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048713.1 654599 D 218491 CDS YP_048714.1 50119547 2885708 655150..657111 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein sty4592 SWALL:Q8Z1H4 (EMBL:AL627282) (649 aa) fasta scores: E(): 1.3e-115, 48.69% id in 651 aa.; hypothetical protein 657111 2885708 ECA0597 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048714.1 655150 D 218491 CDS YP_048715.1 50119548 2884073 657186..658079 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein sty4593 SWALL:Q8Z1H3 (EMBL:AL627282) (302 aa) fasta scores: E(): 7.9e-40, 41.33% id in 300 aa; hypothetical protein 658079 2884073 ECA0598 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048715.1 657186 D 218491 CDS YP_048716.1 50119549 2884074 658154..659074 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty4594 SWALL:Q8Z1H2 (EMBL:AL627282) (299 aa) fasta scores: E(): 8.5e-43, 41.31% id in 288 aa.; hypothetical protein 659074 2884074 ECA0599 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048716.1 658154 D 218491 CDS YP_048717.1 50119550 2884879 complement(659713..661026) 1 NC_004547.2 Similar to the C-terminal region of Pseudomonas syringae oxidoreductase Cfa8 SWALL:O69071 (EMBL:AF061506) (565 aa) fasta scores: E(): 6.5e-122, 74.05% id in 397 aa, and to Streptomyces lavendulae hypothetical 45.2 kDa protein SWALL:Q9X5P6 (EMBL:AF127374) (414 aa) fasta scores: E(): 2.2e-82, 52.39% id in 397 aa; oxidoreductase 661026 cfa8B 2884879 cfa8B Pectobacterium atrosepticum SCRI1043 oxidoreductase YP_048717.1 659713 R 218491 CDS YP_048718.1 50119551 2884878 complement(661110..661541) 1 NC_004547.2 Similar to the N-terminal region of Pseudomonas syringae oxidoreductase Cfa8 SWALL:O69071 (EMBL:AF061506) (565 aa) fasta scores: E(): 8.2e-20, 45.11% id in 133 aa; oxidoreductase 661541 cfa8A 2884878 cfa8A Pectobacterium atrosepticum SCRI1043 oxidoreductase YP_048718.1 661110 R 218491 CDS YP_048719.1 50119552 2885098 complement(661605..667991) 1 NC_004547.2 Similar to Pseudomonas syringae type I polyketide synthase Cfa7 SWALL:Q9Z3T8 (EMBL:AF098795) (2066 aa) fasta scores: E(): 0, 52.6% id in 2091 aa, and to Streptomyces coelicolor type I polyketide synthase sco6275 SWALL:CAD55506 (EMBL:AL939127) (4557 aa) fasta scores: E(): 3e-183, 44.33% id in 1845 aa; type I polyketide synthase 667991 cfa7 2885098 cfa7 Pectobacterium atrosepticum SCRI1043 type I polyketide synthase YP_048719.1 661605 R 218491 CDS YP_048720.1 50119553 2885097 complement(667988..676129) 1 NC_004547.2 Similar to Pseudomonas syringae type I polyketide synthase Cfa6 SWALL:Q9Z3T9 (EMBL:AF098795) (2731 aa) fasta scores: E(): 0, 60.14% id in 2725 aa, and to Polyangium cellulosum Soraphen polyketide synthase A SorA SWALL:Q9ADL6 (EMBL:U24241) (6315 aa) fasta scores: E(): 0, 43.21% id in 2277 aa; type I polyketide synthase 676129 cfa6 2885097 cfa6 Pectobacterium atrosepticum SCRI1043 type I polyketide synthase YP_048720.1 667988 R 218491 CDS YP_048721.1 50119554 2885096 complement(676143..677582) 1 NC_004547.2 Similar to Pseudomonas syringae coronafacic acid synthetase, ligase component cfa5 or pspto4685 SWALL:Q87W71 (EMBL:AE016872) (472 aa) fasta scores: E(): 4.8e-77, 48.72% id in 472 aa; coronafacic acid synthetase, ligase component 677582 cfa5 2885096 cfa5 Pectobacterium atrosepticum SCRI1043 coronafacic acid synthetase, ligase component YP_048721.1 676143 R 218491 CDS YP_048722.1 50119555 2885685 complement(677579..678112) 1 NC_004547.2 Similar to Pseudomonas syringae coronafacic acid synthetase component cfa4 or pspto4684 SWALL:Q87W72 (EMBL:AE016872) (177 aa) fasta scores: E(): 4e-25, 46.38% id in 166 aa; coronafacic acid synthetase component 678112 cfa4 2885685 cfa4 Pectobacterium atrosepticum SCRI1043 coronafacic acid synthetase component YP_048722.1 677579 R 218491 CDS YP_048723.1 50119556 2885684 complement(678109..679254) 1 NC_004547.2 Similar to Pseudomonas syringae cfa-beta-ketoacylsynthase Cfa3 SWALL:P72239 (EMBL:U56980) (379 aa) fasta scores: E(): 2.7e-75, 56.15% id in 374 aa, and to Streptomyces coelicolor 3-oxoacyl-(acyl-carrier-protein) synthase Sco0548 or scf11.28C SWALL:Q9RK62 (EMBL:AL939105) (428 aa) fasta scores: E(): 3.6e-25, 34.45% id in 415 aa; Cfa-beta-ketoacylsynthase 679254 cfa3 2885684 cfa3 Pectobacterium atrosepticum SCRI1043 Cfa-beta-ketoacylsynthase YP_048723.1 678109 R 218491 CDS YP_048724.1 50119557 2885683 complement(679248..679745) 1 NC_004547.2 Similar to Pseudomonas syringae coronafacic acid dehydratase Cfa2 SWALL:CFA2_PSESG (SWALL:P72238) (165 aa) fasta scores: E(): 3.3e-49, 76.97% id in 165 aa; coronafacic acid dehydratase 679745 cfa2 2885683 cfa2 Pectobacterium atrosepticum SCRI1043 coronafacic acid dehydratase YP_048724.1 679248 R 218491 CDS YP_048725.1 50119558 2881443 complement(679742..680017) 1 NC_004547.2 Similar to Pseudomonas syringae cfa-acyl carrier protein Cfa1 SWALL:P72237 (EMBL:U56980) (83 aa) fasta scores: E(): 6.8e-17, 60% id in 80 aa; Cfa-acyl carrier protein 680017 cfa1 2881443 cfa1 Pectobacterium atrosepticum SCRI1043 Cfa-acyl carrier protein YP_048725.1 679742 R 218491 CDS YP_048726.1 50119559 2884880 complement(680119..681681) 1 NC_004547.2 Similar to Pseudomonas syringae coronafacate ligase Cfl SWALL:Q52375 (EMBL:U09027) (509 aa) fasta scores: E(): 1.4e-71, 37.3% id in 512 aa; coronafacate ligase 681681 cfl 2884880 cfl Pectobacterium atrosepticum SCRI1043 coronafacate ligase YP_048726.1 680119 R 218491 CDS YP_048727.1 50119560 2884075 681941..682903 1 NC_004547.2 Similar to Pseudomonas putida transcriptional regulator, LysR family pp5261 SWALL:AAN70826 (EMBL:AE016793) (308 aa) fasta scores: E(): 3.6e-24, 32.4% id in 287 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 glycine cleavage system transcriptional activator GcvA SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 2.4e-16, 31.13% id in 273 aa.; LysR family transcriptional regulator 682903 2884075 ECA0610 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_048727.1 681941 D 218491 CDS YP_048728.1 50119561 2884027 683332..684792 1 NC_004547.2 Similar to Salmonella typhi DNA helicase sty4664 SWALL:Q8Z1C6 (EMBL:AL627283) (503 aa) fasta scores: E(): 1.4e-115, 59.24% id in 476 aa and to Proteus vulgaris helicase orf193 SWALL:Q8L286 (EMBL:AP004237) (491 aa) fasta scores: E(): 2.6e-64, 39.24% id in 474 aa.; hypothetical protein 684792 2884027 ECA0611 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048728.1 683332 D 218491 CDS YP_048729.1 50119562 2884028 684912..685403 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein pa2496 SWALL:Q9I0Y6 (EMBL:AE004677) (171 aa) fasta scores: E(): 5.5e-16, 33.12% id in 157 aa.Note that there are no significant database matches to enterobacterial species.; hypothetical protein 685403 2884028 ECA0612 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048729.1 684912 D 218491 CDS YP_048730.1 50119563 2884029 685696..687294 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein sty4665 SWALL:Q8Z1C5 (EMBL:AL627283) (529 aa) fasta scores: E(): 3.7e-24, 32.5% id in 523 aa, and to Pseudomonas syringae hypothetical 70.0 kDa protein SWALL:Q8RL93 (EMBL:AY083467) (638 aa) fasta scores: E(): 1.4e-12, 25.24% id in 622 aa; hypothetical protein 687294 2884029 ECA0613 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048730.1 685696 D 218491 CDS YP_048731.1 50119564 2883780 687380..688402 1 NC_004547.2 Similar to Pseudomonas aeruginosa XerC SWALL:Q9F771 (EMBL:AF285416) (427 aa) fasta scores: E(): 7.2e-36, 36.52% id in 334 aa, and to Salmonella typhi probable phage integrase sty4666 or t4357 SWALL:Q8Z1C4 (EMBL:AL627283) (337 aa) fasta scores: E(): 2.2e-62, 48.37% id in 339 aa; phage integrase 688402 2883780 ECA0614 Pectobacterium atrosepticum SCRI1043 phage integrase YP_048731.1 687380 D 218491 CDS YP_048732.1 50119565 2883781 688832..689677 1 NC_004547.2 Similar to Pseudomonas putida transcriptional regulator, AraC family pp2430 SWALL:AAN68042 (EMBL:AE016783) (276 aa) fasta scores: E(): 1.1e-67, 56.72% id in 275 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa2917 SWALL:Q9HZT0 (EMBL:AE004718) (278 aa) fasta scores: E(): 2.1e-63, 53.65% id in 274 aa; AraC family transcriptional regulator 689677 2883781 ECA0615 Pectobacterium atrosepticum SCRI1043 AraC family transcriptional regulator YP_048732.1 688832 D 218491 CDS YP_048733.1 50119566 2883782 689713..690303 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein 6 pa2916 SWALL:Q9HZT1 (EMBL:AE004718) (197 aa) fasta scores: E(): 1.2e-35, 47.93% id in 194 aa, and to Pseudomonas putida membrane protein, pp2429 SWALL:AAN68041 (EMBL:AE016783) (194 aa) fasta scores: E(): 1.9e-31, 44.61% id in 195 aa; hypothetical protein 690303 2883782 ECA0616 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048733.1 689713 D 218491 CDS YP_048734.1 50119567 2883621 complement(690300..690875) 1 NC_004547.2 Similar to Yersinia pestis TetR-family regulatory protein ypo0341 SWALL:Q8ZIZ3 (EMBL:AJ414142) (191 aa) fasta scores: E(): 4.5e-49, 68.58% id in 191 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri protein YjdC SWALL:AAN45707 (EMBL:Z36905) (191 aa) fasta scores: E(): 1.3e-48, 64.92% id in 191 aa; transcriptional regulator 690875 2883621 ECA0617 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_048734.1 690300 R 218491 CDS YP_048735.1 50119568 2882295 complement(690918..692651) 1 NC_004547.2 two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm; thiol:disulfide interchange protein 692651 dipZ 2882295 dipZ Pectobacterium atrosepticum SCRI1043 thiol:disulfide interchange protein YP_048735.1 690918 R 218491 CDS YP_048736.1 50119569 2883448 complement(692627..692962) 1 NC_004547.2 copper binding protein required for copper tolerance; involved in resistance toward heavy metals; divalent-cation tolerance protein CutA 692962 cutA 2883448 cutA Pectobacterium atrosepticum SCRI1043 divalent-cation tolerance protein CutA YP_048736.1 692627 R 218491 CDS YP_048737.1 50119570 2884887 complement(693111..694412) 1 NC_004547.2 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter 694412 dcuA 2884887 dcuA Pectobacterium atrosepticum SCRI1043 anaerobic C4-dicarboxylate transporter YP_048737.1 693111 R 218491 CDS YP_048738.1 50119571 2885553 complement(694534..695973) 1 NC_004547.2 catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 695973 aspA 2885553 aspA Pectobacterium atrosepticum SCRI1043 aspartate ammonia-lyase YP_048738.1 694534 R 218491 CDS YP_048739.1 50119572 2883272 696469..696939 1 NC_004547.2 Similar to Escherichia coli FxsA protein FxsA or b4140 SWALL:FXSA_ECOLI (SWALL:P37147) (158 aa) fasta scores: E(): 1.3e-38, 68.35% id in 158 aa; suppressor of F plamsid exlusion of phage T7 696939 fxsA 2883272 fxsA Pectobacterium atrosepticum SCRI1043 suppressor of F plamsid exlusion of phage T7 YP_048739.1 696469 D 218491 CDS YP_048740.1 50119573 2885719 697176..697469 1 NC_004547.2 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 697469 groES 2885719 groES Pectobacterium atrosepticum SCRI1043 co-chaperonin GroES YP_048740.1 697176 D 218491 CDS YP_048741.1 50119574 2885718 697515..699164 1 NC_004547.2 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 699164 groEL 2885718 groEL Pectobacterium atrosepticum SCRI1043 molecular chaperone GroEL YP_048741.1 697515 D 218491 CDS YP_048742.1 50119575 2884218 699428..699961 1 NC_004547.2 catalyzes the formation of 4-hydroxybenzoate from chorismate; chorismate pyruvate lyase 699961 ubiC 2884218 ubiC Pectobacterium atrosepticum SCRI1043 chorismate pyruvate lyase YP_048742.1 699428 D 218491 CDS YP_048743.1 50119576 2884216 699974..700837 1 NC_004547.2 catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; 4-hydroxybenzoate octaprenyltransferase 700837 ubiA 2884216 ubiA Pectobacterium atrosepticum SCRI1043 4-hydroxybenzoate octaprenyltransferase YP_048743.1 699974 D 218491 CDS YP_048744.1 50119577 2883490 complement(700978..703455) 1 NC_004547.2 PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; glycerol-3-phosphate acyltransferase 703455 plsB 2883490 plsB Pectobacterium atrosepticum SCRI1043 glycerol-3-phosphate acyltransferase YP_048744.1 700978 R 218491 CDS YP_048745.1 50119578 2883562 703585..703950 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri diacylglycerol kinase DgkA or b4042 or c5013 or z5641 or ecs5025 or sf4163 SWALL:KDGL_ECOLI (SWALL:P00556) (121 aa) fasta scores: E(): 7.4e-27, 61.34% id in 119 aa; diacylglycerol kinase 703950 dgkA 2883562 dgkA Pectobacterium atrosepticum SCRI1043 diacylglycerol kinase YP_048745.1 703585 D 218491 CDS YP_048746.1 50119579 2883334 704061..704669 1 NC_004547.2 Represses a number of genes involved in the response to DNA damage; LexA repressor 704669 lexA 2883334 lexA Pectobacterium atrosepticum SCRI1043 LexA repressor YP_048746.1 704061 D 218491 CDS YP_048747.1 50119580 2883622 705108..705329 1 NC_004547.2 unknown function; highly abundant protein in vivo; overexpressed under high NaCl concentrations; part of the sigma S regulon; non-essential; stress-response protein 705329 2883622 ECA0631 Pectobacterium atrosepticum SCRI1043 stress-response protein YP_048747.1 705108 D 218491 CDS YP_048748.1 50119581 2882466 complement(705376..705891) 1 NC_004547.2 Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB; zinc uptake transcriptional repressor 705891 zur 2882466 zur Pectobacterium atrosepticum SCRI1043 zinc uptake transcriptional repressor YP_048748.1 705376 R 218491 CDS YP_048749.1 50119582 2883623 complement(705992..706690) 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein sty3416 SWALL:Q8Z3K9 (EMBL:AL627278) (233 aa) fasta scores: E(): 1.4e-65, 68.67% id in 233 aa, and to Escherichia coli hypothetical protein YhaK SWALL:YHAK_ECOLI (SWALL:P42624) (233 aa) fasta scores: E(): 2.8e-63, 67.38% id in 233 aa; hypothetical protein 706690 2883623 ECA0633 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048749.1 705992 R 218491 CDS YP_048750.1 50119583 2883464 706802..707698 1 NC_004547.2 Similar to Yersinia pestis LysR-family transcriptional regulatory protein ypo3545 SWALL:AAM83707 (EMBL:AJ414157) (297 aa) fasta scores: E(): 1.3e-97, 87.2% id in 297 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical transcriptional regulator YhaJ SWALL:YHAJ_ECOLI (SWALL:P42623) (298 aa) fasta scores: E(): 5.3e-97, 86.82% id in 296 aa; LysR family transcriptional regulator 707698 2883464 ECA0634 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_048750.1 706802 D 218491 CDS YP_048751.1 50119584 2883465 complement(707778..708773) 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Ssty3413 SWALL:Q8Z3L1 (EMBL:AL627278) (328 aa) fasta scores: E(): 3.6e-101, 75.53% id in 327 aa, and to Escherichia coli O157:H7 transferase YqjG SWALL:Q8XAH0 (EMBL:AE005539) (328 aa) fasta scores: E(): 1.9e-99, 74.61% id in 327 aa; hypothetical protein 708773 2883465 ECA0635 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048751.1 707778 R 218491 CDS YP_048752.1 50119585 2883466 complement(708894..709289) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein y3612 SWALL:AAM87160 (EMBL:AE013963) (136 aa) fasta scores: E(): 3.7e-38, 76.33% id in 131 aa, and to Salmonella typhimurium membrane-associated protein YqjF SWALL:Q8ZLW9 (EMBL:AE008848) (161 aa) fasta scores: E(): 2.3e-37, 77.86% id in 131 aa; hypothetical protein 709289 2883466 ECA0636 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048752.1 708894 R 218491 CDS YP_048753.1 50119586 2885591 complement(709563..709853) 1 NC_004547.2 Similar to Escherichia coli hypothetical protein YqjK SWALL:YQJK_ECOLI (SWALL:Q47710) (99 aa) fasta scores: E(): 1.5e-17, 47.36% id in 95 aa, and to Salmonella typhimurium, and Salmonella typhi inner membrane protein YqjK SWALL:Q8XGR1 (EMBL:AE008848) (99 aa) fasta scores: E(): 4.6e-17, 45.26% id in 95 aa.; hypothetical protein 709853 2885591 ECA0637 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048753.1 709563 R 218491 CDS YP_048754.1 50119587 2885592 complement(709850..710245) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi inner membrane protein stm3230 or sty3410 SWALL:Q8XFR8 (EMBL:AE008848) (132 aa) fasta scores: E(): 8.1e-30, 67.69% id in 130 aa, and to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein YqjE SWALL:YQJE_ECOLI (SWALL:P42618) (134 aa) fasta scores: E(): 1.3e-28, 64.39% id in 132 aa; hypothetical protein 710245 2885592 ECA0638 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048754.1 709850 R 218491 CDS YP_048755.1 50119588 2885593 complement(710259..710564) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo0570 SWALL:AAM87157 (EMBL:AJ414143) (101 aa) fasta scores: E(): 2.3e-22, 76.23% id in 101 aa, and to Salmonella typhimurium, and Salmonella typhi inner membrane protein stm3229 or sty3409 SWALL:Q8XEQ1 (EMBL:AE008848) (101 aa) fasta scores: E(): 9.6e-21, 71.28% id in 101 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein YqjD SWALL:YQJD_ECOLI (SWALL:P42617) (101 aa) fasta scores: E(): 2.2e-20, 69.3% id in 101 aa; hypothetical protein 710564 2885593 ECA0639 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048755.1 710259 R 218491 CDS YP_048756.1 50119589 2882319 complement(710756..711145) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi periplasmic protein stm3228 or sty3408 SWALL:Q8XF23 (EMBL:AE008848) (122 aa) fasta scores: E(): 1.4e-12, 49.15% id in 118 aa, and to Escherichia coli protein YqjC SWALL:YQJC_ECOLI (SWALL:P42616) (122 aa) fasta scores: E(): 1.6e-12, 50.83% id in 120 aa.; hypothetical protein 711145 2882319 ECA0640 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048756.1 710756 R 218491 CDS YP_048757.1 50119590 2882320 complement(711151..711546) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi outer membrane protein YqjB or stm3227 or sty3407 SWALL:Q8XF92 (EMBL:AE008848) (127 aa) fasta scores: E(): 8.8e-09, 36.43% id in 129 aa, and to Yersinia pestis membrane protein ypo0573 SWALL:Q8ZID2 (EMBL:AJ414143) (129 aa) fasta scores: E(): 1.6e-08, 46.31% id in 95 aa; hypothetical protein 711546 2882320 ECA0641 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048757.1 711151 R 218491 CDS YP_048758.1 50119591 2882321 complement(711549..712232) 1 NC_004547.2 Similar to Yersinia pestis DedA-family membrane protein ypo0574 SWALL:Q8ZID1 (EMBL:AJ414143) (232 aa) fasta scores: E(): 1.2e-71, 77.29% id in 229 aa, and to Salmonella typhimurium DedA family, membrane protein stm3226 SWALL:Q8ZLX0 (EMBL:AE008848) (220 aa) fasta scores: E(): 2.8e-67, 76.27% id in 215 aa.; DedA family membrane protein 712232 2882321 ECA0642 Pectobacterium atrosepticum SCRI1043 DedA family membrane protein YP_048758.1 711549 R 218491 CDS YP_048759.1 50119592 2884024 complement(712685..713461) 1 NC_004547.2 regulates the exuT, uxaCA and uxuRAB operons which encode genes involved in hexuronate utilization.; DNA-binding transcriptional repressor ExuR 713461 exuR 2884024 exuR Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional repressor ExuR YP_048759.1 712685 R 218491 CDS YP_048760.1 50119593 2884025 complement(713669..714970) 1 NC_004547.2 Similar to Erwinia chrysanthemi ExuT SWALL:P94774 (EMBL:U86689) (345 aa) fasta scores: E(): 6.4e-122, 88.78% id in 330 aa, and to Ralstonia solanacearum ExuT SWALL:Q93AS8 (EMBL:AF417111) (439 aa) fasta scores: E(): 2.8e-99, 56.39% id in 422 aa; galacturonate transporter 714970 exuT 2884025 exuT Pectobacterium atrosepticum SCRI1043 galacturonate transporter YP_048760.1 713669 R 218491 CDS YP_048761.1 50119594 2882865 715386..716795 1 NC_004547.2 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; glucuronate isomerase 716795 uxaC 2882865 uxaC Pectobacterium atrosepticum SCRI1043 glucuronate isomerase YP_048761.1 715386 D 218491 CDS YP_048762.1 50119595 2882732 717006..718472 1 NC_004547.2 catalyzes the formation of D-tagaturonate from D-altronate; altronate oxidoreductase 718472 uxaB1 2882732 uxaB1 Pectobacterium atrosepticum SCRI1043 altronate oxidoreductase YP_048762.1 717006 D 218491 CDS YP_048763.1 50119596 2882731 718492..719982 1 NC_004547.2 Similar to Escherichia coli altronate hydrolase UxaA SWALL:UXAA_ECOLI (SWALL:P42604) (495 aa) fasta scores: E(): 4.1e-163, 80.24% id in 496 aa; altronate hydrolase 719982 uxaA 2882731 uxaA Pectobacterium atrosepticum SCRI1043 altronate hydrolase YP_048763.1 718492 D 218491 CDS YP_048764.1 50119597 2882371 720072..720602 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo0582 or y3597 SWALL:AAM87145 (EMBL:AJ414143) (176 aa) fasta scores: E(): 3.4e-49, 73.86% id in 176 aa, and to Escherichia coli hypothetical protein ygjv ygjv or b3090 SWALL:YGJV_ECOLI (SWALL:P42603) (183 aa) fasta scores: E(): 1.2e-47, 67.81% id in 174 aa; hypothetical protein 720602 2882371 ECA0648 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048764.1 720072 D 218491 CDS YP_048765.1 50119598 2882372 720949..722940 1 NC_004547.2 Weakly similar to Schizosaccharomyces pombe DNA mismatch repair protein, mlh1 homolog spbc1703.04 SWALL:Q9P7W6 (EMBL:AL136536) (684 aa) fasta scores: E(): 0.11, 21.48% id in 498 aa, and to Neisseria meningitidis hypothetical protein Nma0428 nma0428 SWALL:Q9JWD7 (EMBL:AL162753) (548 aa) fasta scores: E(): 0.18, 22.37% id in 523 aa; DNA mismatch repair protein 722940 2882372 ECA0649 Pectobacterium atrosepticum SCRI1043 DNA mismatch repair protein YP_048765.1 720949 D 218491 CDS YP_048766.1 50119599 2882373 722963..723394 1 NC_004547.2 Similar to Vibrio cholerae hypothetical protein vca0440 SWALL:Q9KMC4 (EMBL:AE004377) (148 aa) fasta scores: E(): 2.6e-05, 28.67% id in 143 aa, and to Salmonella typhi membrane protein sty4669 SWALL:Q8Z1C1 (EMBL:AL627283) (150 aa) fasta scores: E(): 4.2e-05, 30.3% id in 132 aa.; hypothetical protein 723394 2882373 ECA0650 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048766.1 722963 D 218491 CDS YP_048767.1 50119600 2885456 complement(724024..725271) 1 NC_004547.2 involved in the import of serine and threonine coupled with the import of sodium; serine/threonine transporter SstT 725271 2885456 ECA0651 Pectobacterium atrosepticum SCRI1043 serine/threonine transporter SstT YP_048767.1 724024 R 218491 CDS YP_048768.1 50119601 2885457 complement(725589..726542) 1 NC_004547.2 Similar to Salmonella typhimurium resistance protein stm3224 SWALL:Q8ZLX2 (EMBL:AE008848) (322 aa) fasta scores: E(): 7e-101, 76.65% id in 317 aa, and to Escherichia coli hypothetical protein YgjT SWALL:YGJT_ECOLI (SWALL:P42601) (321 aa) fasta scores: E(): 3.3e-95, 73.12% id in 320 aa; hypothetical protein 726542 2885457 ECA0652 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048768.1 725589 R 218491 CDS YP_048769.1 50119602 2885458 complement(726815..727813) 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical oxidoreductase YgjR SWALL:AAN82290 (EMBL:AE016767) (334 aa) fasta scores: E(): 2.7e-91, 70.76% id in 325 aa.; oxidoreductase 727813 2885458 ECA0653 Pectobacterium atrosepticum SCRI1043 oxidoreductase YP_048769.1 726815 R 218491 CDS YP_048770.1 50119603 2881605 727975..729114 1 NC_004547.2 Similar to Escherichia coli ribosomal RNA small subunit methyltransferase D YgjO or SWALL:RSMD_ECOLI (SWALL:P42596) (378 aa) fasta scores: E(): 8.5e-93, 61.47% id in 379 aa, and to Yersinia pestis methyltransferase ypo0588 SWALL:Q8ZIB9 (EMBL:AJ414143) (395 aa) fasta scores: E(): 1.5e-98, 64.64% id in 379 aa; hypothetical protein 729114 2881605 ECA0654 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048770.1 727975 D 218491 CDS YP_048771.1 50119604 2883500 complement(729131..731182) 1 NC_004547.2 Similar to Escherichia coli 2,4-dienoyl-CoA reductase [NADPH] FadH or b3081 SWALL:FADH_ECOLI (SWALL:P42593) (671 aa) fasta scores: E(): 1e-145, 69.35% id in 682 aa, and to Pseudomonas putida 2,4-dienoyl-coA reductase FadH SWALL:AAN67622 (EMBL:AE016781) (693 aa) fasta scores: E(): 8.6e-160, 64.12% id in 683 aa.; 2,4-dienoyl-CoA reductase 731182 fadF 2883500 fadF Pectobacterium atrosepticum SCRI1043 2,4-dienoyl-CoA reductase YP_048771.1 729131 R 218491 CDS YP_048772.1 50119605 2881606 731397..731693 1 NC_004547.2 Similar to Yersinia pestis hypothetical y1229 SWALL:AAM84804 (EMBL:AE013726) (134 aa) fasta scores: E(): 6.4e-07, 36.55% id in 93 aa; hypothetical protein 731693 2881606 ECA0656 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048772.1 731397 D 218491 CDS YP_048773.1 50119606 2881607 731959..732447 1 NC_004547.2 periplasmic protein induced by stress response via Cpx and BaeSR system; similar to CpxP; periplasmic protein 732447 2881607 ECA0658 Pectobacterium atrosepticum SCRI1043 periplasmic protein YP_048773.1 731959 D 218491 CDS YP_048774.1 50119607 2881235 732646..734115 1 NC_004547.2 Similar to Pseudomonas putida GGDEF domain protein pp3932 SWALL:AAN69526 (EMBL:AE016788) (402 aa) fasta scores: E(): 3e-26, 29.21% id in 397 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein YddV SWALL:YDDV_ECOLI (SWALL:P77793) (460 aa) fasta scores: E(): 6.6e-17, 33.83% id in 198 aa.; signaling membrane protein 734115 2881235 ECA0659 Pectobacterium atrosepticum SCRI1043 signaling membrane protein YP_048774.1 732646 D 218491 CDS YP_048775.1 50119608 2881236 734184..734549 1 NC_004547.2 Similar to Rhizobium loti hypothetical protein mlr5326 SWALL:Q98C23 (EMBL:AP003006) (130 aa) fasta scores: E(): 2.2e-14, 50.82% id in 122 aa, and to Anabaena sp. hypothetical protein All7633 all7633 SWALL:Q8ZS79 (EMBL:AP003602) (242 aa) fasta scores: E(): 3.2e-06, 41% id in 100 aa.; hypothetical protein 734549 2881236 ECA0660 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048775.1 734184 D 218491 CDS YP_048776.1 50119609 2881237 734875..736791 1 NC_004547.2 Similar to Erwinia chrysanthemi PTS system, beta-glucoside-specific IIabc component ArbF SWALL:PTBA_ERWCH (SWALL:P26207) (631 aa) fasta scores: E(): 2.4e-60, 42.76% id in 622 aa, and to Escherichia coli PTS system, beta-glucoside-specific IIabc component BglF or BglC or BglS or b3722 SWALL:PTBA_ECOLI (SWALL:P08722) (625 aa) fasta scores: E(): 6.6e-60, 42.09% id in 639 aa; PTS system beta-glucoside-specific transporter subunit IIABC 736791 2881237 ECA0661 Pectobacterium atrosepticum SCRI1043 PTS system beta-glucoside-specific transporter subunit IIABC YP_048776.1 734875 D 218491 CDS YP_048777.1 50119610 2881615 complement(736847..738250) 1 NC_004547.2 Similar to Erwinia chrysanthemi 6-phospho-beta-glucosidase ArbB SWALL:ARBB_ERWCH (SWALL:P26206) (465 aa) fasta scores: E(): 3.8e-144, 71.67% id in 459 aa, and to Escherichia coli 6-phospho-beta-glucosidase BglB or b3721 SWALL:BGLB_ECOLI (SWALL:P11988) (470 aa) fasta scores: E(): 4.5e-139, 67.74% id in 462 aa; 6-phospho-beta-glucosidase 738250 2881615 ECA0662 Pectobacterium atrosepticum SCRI1043 6-phospho-beta-glucosidase YP_048777.1 736847 R 218491 CDS YP_048778.1 50119611 2881616 738351..738506 1 NC_004547.2 Similar to an internal region of Fusarium oxysporum f. sp. radicis-lycopersici exopolygalacturonase pg1 SWALL:Q9UUT3 (EMBL:AF136444) (464 aa) fasta scores: E(): 3.2, 33.87% id in 62 aa; hypothetical protein 738506 2881616 ECA0663 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048778.1 738351 D 218491 CDS YP_048779.1 50119612 2881617 738654..738935 1 NC_004547.2 Similar to the N-terminal region of Aeromonas hydrophila LysR-type transcriptional regulator BdhR SWALL:Q93N31 (EMBL:AF388671) (320 aa) fasta scores: E(): 0.063, 30.1% id in 93 aa; hypothetical protein 738935 2881617 ECA0664 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048779.1 738654 D 218491 CDS YP_048780.1 50119613 2882600 739283..740689 1 NC_004547.2 Similar to Xylella fastidiosa phage-related integrase xf0631 SWALL:Q9PFM6 (EMBL:AE003908) (413 aa) fasta scores: E(): 2.4e-13, 31.42% id in 420 aa, and to Escherichia coli InT protein SWALL:Q93K89 (EMBL:X16664) (386 aa) fasta scores: E(): 1.1e-05, 26.36% id in 239 aa, and to Bacteriophage D3 integrase orf35 SWALL:Q9T1P3 (EMBL:AF165214) (369 aa) fasta scores: E(): 0.0047, 28.4% id in 176 aa.; phage integrase 740689 2882600 ECA0665 Pectobacterium atrosepticum SCRI1043 phage integrase YP_048780.1 739283 D 218491 CDS YP_048781.1 50119614 2882601 740667..741473 1 NC_004547.2 No significant database matches.; hypothetical protein 741473 2882601 ECA0666 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048781.1 740667 D 218491 CDS YP_048782.1 50119615 2882602 741625..741816 1 NC_004547.2 Similar to Oceanobacillus iheyensis hypothetical conserved protein ob3324 SWALL:BAC15280 (EMBL:AP004604) (64 aa) fasta scores: E(): 8.4, 32.2% id in 59 aa, and to Vibrio vulnificus hypothetical protein vv12463 SWALL:AAO10827 (EMBL:AE016805) (78 aa) fasta scores: E(): 9.9, 33.89% id in 59 aa; hypothetical protein 741816 2882602 ECA0667 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048782.1 741625 D 218491 CDS YP_048783.1 50119616 2881230 741882..742790 1 NC_004547.2 No significant database matches.; hypothetical protein 742790 2881230 ECA0668 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048783.1 741882 D 218491 CDS YP_048784.1 50119617 2881231 742780..743127 1 NC_004547.2 Weakly similar to Pseudomonas aeruginosa hypothetical protein Pa0014 SWALL:Q9I7B2 (EMBL:AE004441) (90 aa) fasta scores: E(): 4, 28.78% id in 66 aa; hypothetical protein 743127 2881231 ECA0669 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048784.1 742780 D 218491 CDS YP_048785.1 50119618 2881232 743120..743425 1 NC_004547.2 No significant database matches.; hypothetical protein 743425 2881232 ECA0670 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048785.1 743120 D 218491 CDS YP_048786.1 50119619 2881221 743498..743797 1 NC_004547.2 Similar to bacteriophage P4 derepression protein epsiloN SWALL:VEPS_BPP4 (SWALL:P05463) (95 aa) fasta scores: E(): 3.4e-08, 43.15% id in 95 aa.; bacteriophage derepression protein 743797 2881221 ECA0671 Pectobacterium atrosepticum SCRI1043 bacteriophage derepression protein YP_048786.1 743498 D 218491 CDS YP_048787.1 50119620 2881222 743861..746539 1 NC_004547.2 Similar to Bacteriophage phi CTX orf37 SWALL:Q9ZXI8 (EMBL:AB008550) (895 aa) fasta scores: E(): 3.8e-96, 42.27% id in 906 aa, and to Ralstonia solanacearum hypothetical phage-related protein rsc1898 or rs03464 SWALL:Q8XY65 (EMBL:AL646067) (902 aa) fasta scores: E(): 4.5e-170, 49.1% id in 894 aa; phage-like protein 746539 2881222 ECA0672 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_048787.1 743861 D 218491 CDS YP_048788.1 50119621 2881223 complement(747115..747489) 1 NC_004547.2 Similar to Yersinia pestis DNA binding protein ypo0883 SWALL:Q8ZHK8 (EMBL:AJ414145) (120 aa) fasta scores: E(): 3.5e-14, 39.51% id in 124 aa, and to Bacteriophage phiE125 gp68 68 SWALL:Q8W6N2 (EMBL:AF447491) (128 aa) fasta scores: E(): 0.053, 28.84% id in 104 aa; phage-related DNA binding protein 747489 2881223 ECA0673 Pectobacterium atrosepticum SCRI1043 phage-related DNA binding protein YP_048788.1 747115 R 218491 CDS YP_048789.1 50119622 2882181 complement(747553..747822) 1 NC_004547.2 Similar to Bacteriophage phiE125 gp69 69 SWALL:Q8W6N1 (EMBL:AF447491) (85 aa) fasta scores: E(): 0.0057, 36.84% id in 76 aa, and to Yersinia pestis hypothetical protein Ypo0884 SWALL:Q8ZHK7 (EMBL:AJ414145) (86 aa) fasta scores: E(): 1.9e-10, 48.31% id in 89 aa; phage-like protein 747822 2882181 ECA0674 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_048789.1 747553 R 218491 CDS YP_048790.1 50119623 2882182 748135..748305 1 NC_004547.2 No significant database matches.; hypothetical protein 748305 2882182 ECA0675 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048790.1 748135 D 218491 CDS YP_048791.1 50119624 2882183 748887..749699 1 NC_004547.2 No significant database matches.; hypothetical protein 749699 2882183 ECA0676 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048791.1 748887 D 218491 CDS YP_048792.1 50119625 2881469 complement(749784..749990) 1 NC_004547.2 Similar to Bacteriophage 186 late control gene B protein B SWALL:VPB_BP186 (SWALL:P08711) (72 aa) fasta scores: E(): 2.1, 48% id in 25 aa, and to Salmonella typhi bacteriophage gene regulatory protein sty4826 or t4523 SWALL:Q8Z107 (EMBL:AL627283) (79 aa) fasta scores: E(): 2.3, 52% id in 25 aa; phage regulatory protein 749990 2881469 ECA0677 Pectobacterium atrosepticum SCRI1043 phage regulatory protein YP_048792.1 749784 R 218491 CDS YP_048793.1 50119626 2881470 complement(750022..750273) 1 NC_004547.2 Similar to Bacteriophage phi CTX orf34 SWALL:Q9ZXJ1 (EMBL:AB008550) (97 aa) fasta scores: E(): 0.11, 36.61% id in 71 aa, and to Escherichia coli O157:H7 activator encoded in prophage cp-933i z0332 or ecs0296 SWALL:Q8X7J1 (EMBL:AE005204) (90 aa) fasta scores: E(): 0.66, 28.3% id in 53 aa; phage regulatory protein 750273 2881470 ECA0678 Pectobacterium atrosepticum SCRI1043 phage regulatory protein YP_048793.1 750022 R 218491 CDS YP_048794.1 50119627 2881596 750702..751205 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 G/U mismatch-specific DNA glycosylase Mug or b3068 or c3822 SWALL:MUG_ECOLI (SWALL:P43342) (168 aa) fasta scores: E(): 3.2e-40, 61.35% id in 163 aa; G/U mismatch-specific DNA glycosylase 751205 mug 2881596 mug Pectobacterium atrosepticum SCRI1043 G/U mismatch-specific DNA glycosylase YP_048794.1 750702 D 218491 CDS YP_048795.1 50119628 2884487 complement(751287..753122) 1 NC_004547.2 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 753122 rpoD 2884487 rpoD Pectobacterium atrosepticum SCRI1043 RNA polymerase sigma factor RpoD YP_048795.1 751287 R 218491 CDS YP_048796.1 50119629 2882738 complement(753277..755031) 1 NC_004547.2 synthesizes RNA primers at the replication forks; DNA primase 755031 dnaG 2882738 dnaG Pectobacterium atrosepticum SCRI1043 DNA primase YP_048796.1 753277 R 218491 CDS YP_048797.1 50119630 2884459 complement(755185..755400) 1 NC_004547.2 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 755400 rpsU 2884459 rpsU Pectobacterium atrosepticum SCRI1043 30S ribosomal protein S21 YP_048797.1 755185 R 218491 CDS YP_048798.1 50119631 2882356 755628..756641 1 NC_004547.2 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 756641 gcp 2882356 gcp Pectobacterium atrosepticum SCRI1043 DNA-binding/iron metalloprotein/AP endonuclease YP_048798.1 755628 D 218491 CDS YP_048799.1 50119632 2884139 complement(756736..757206) 1 NC_004547.2 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; arginine repressor ArgR 757206 argR 2884139 argR Pectobacterium atrosepticum SCRI1043 arginine repressor ArgR YP_048799.1 756736 R 218491 CDS YP_048800.1 50119633 2885116 757677..758612 1 NC_004547.2 oxidizes malate to oxaloacetate; malate dehydrogenase 758612 mdh 2885116 mdh Pectobacterium atrosepticum SCRI1043 malate dehydrogenase YP_048800.1 757677 D 218491 CDS YP_048801.1 50119634 2884395 complement(758837..759100) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri sugar fermentation stimulation protein B SfsB or Nlp or sfs7 or b3188 or c3946 or z4551 or ecs4067 or sf3228 SWALL:SFSB_ECOLI (SWALL:P18837) (92 aa) fasta scores: E(): 5.7e-20, 70.88% id in 79 aa. Also similar to ECA0513 (71.233% id. in 73 aa overlap), and to ECA0966 (72.368% id. in 76 aa overlap), and to ECA3206 (76.119% id. in 67 aa overlap.); sugar fermentation stimulation protein 759100 sfsB 2884395 sfsB Pectobacterium atrosepticum SCRI1043 sugar fermentation stimulation protein YP_048801.1 758837 R 218491 CDS YP_048802.1 50119635 2881471 759288..759674 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3514 SWALL:AAM84258 (EMBL:AJ414157) (133 aa) fasta scores: E(): 1.9e-17, 47.32% id in 112 aa and to bacteriophage D3112 transposase A SWALL:Q38013 (EMBL:X87627) (690 aa) fasta scores: E(): 0.00026, 33.69% id in 92 aa.; DNA-binding protein 759674 2881471 ECA0687 Pectobacterium atrosepticum SCRI1043 DNA-binding protein YP_048802.1 759288 D 218491 CDS YP_048803.1 50119636 2881783 759882..760298 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3514 SWALL:Q8ZBA4 (EMBL:AJ414157) (133 aa) fasta scores: E(): 9.5e-19, 45.83% id in 120 aa, and to Bacteriophage D108 repressor protein CI SWALL:RPC1_BPD10 (SWALL:P07040) (174 aa) fasta scores: E(): 0.00012, 42.37% id in 59 aa; hypothetical protein 760298 2881783 ECA0688 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048803.1 759882 D 218491 CDS YP_048804.1 50119637 2881967 complement(760380..761351) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri octaprenyl-diphosphate synthase IspB or Cel or b3187 or sf3227 SWALL:ISPB_ECOLI (SWALL:P19641) (323 aa) fasta scores: E(): 7.9e-100, 83.54% id in 322 aa; octaprenyl diphosphate synthase 761351 ispB 2881967 ispB Pectobacterium atrosepticum SCRI1043 octaprenyl diphosphate synthase YP_048804.1 760380 R 218491 CDS YP_048805.1 50119638 2883228 761608..761919 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri 50S ribosomal protein L21 RplU SWALL:RL21_ECOLI (SWALL:P02422) (103 aa) fasta scores: E(): 2.4e-34, 92.23% id in 103 aa.; 50S ribosomal protein L21 761919 rplU 2883228 rplU Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L21 YP_048805.1 761608 D 218491 CDS YP_048806.1 50119639 2883132 761939..762196 1 NC_004547.2 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 762196 rpmA 2883132 rpmA Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L27 YP_048806.1 761939 D 218491 CDS YP_048807.1 50119640 2881784 762286..763248 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo3510 SWALL:AAM84262 (EMBL:AJ414157) (328 aa) fasta scores: E(): 3e-95, 78.77% id in 311 aa, and to Salmonella typhi membrane protein sty3481 SWALL:Q8Z3H0 (EMBL:AL627278) (321 aa) fasta scores: E(): 1.3e-92, 77.24% id in 312 aa; hypothetical protein 763248 2881784 ECA0692 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048807.1 762286 D 218491 CDS YP_048808.1 50119641 2881785 763509..764681 1 NC_004547.2 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 764681 obgE 2881785 obgE Pectobacterium atrosepticum SCRI1043 GTPase ObgE YP_048808.1 763509 D 218491 CDS YP_048809.1 50119642 2881624 complement(764752..766185) 1 NC_004547.2 penicillin binding protein 4; penicillin sensitive; catalyzes the formation of D-alanine from D-alanyl-D-alanine; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains; D-alanyl-D-alanine carboxypeptidase/endopeptidase 766185 dacD 2881624 dacD Pectobacterium atrosepticum SCRI1043 D-alanyl-D-alanine carboxypeptidase/endopeptidase YP_048809.1 764752 R 218491 CDS YP_048810.1 50119643 2885813 766454..766933 1 NC_004547.2 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 766933 greA 2885813 greA Pectobacterium atrosepticum SCRI1043 transcription elongation factor GreA YP_048810.1 766454 D 218491 CDS YP_048811.1 50119644 2881857 complement(767061..767354) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi RNA-binding protein containing kh domain stm3298 or sty3476 SWALL:Q8XG58 (EMBL:AE008852) (110 aa) fasta scores: E(): 3.7e-30, 88.66% id in 97 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein YhbY SWALL:YHBY_ECOLI (SWALL:P42550) (97 aa) fasta scores: E(): 5.2e-30, 88.66% id in 97 aa.; hypothetical protein 767354 2881857 ECA0696 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048811.1 767061 R 218491 CDS YP_048812.1 50119645 2884455 767499..768128 1 NC_004547.2 Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit; 23S rRNA methyltransferase 768128 rrmJ 2884455 rrmJ Pectobacterium atrosepticum SCRI1043 23S rRNA methyltransferase YP_048812.1 767499 D 218491 CDS YP_048813.1 50119646 2881803 768185..770122 1 NC_004547.2 inner membrane metalloprotease; may be involved in degradation of aberrant cytoplasmic and membrane proteins; ATP-dependent metalloprotease 770122 hflB 2881803 hflB Pectobacterium atrosepticum SCRI1043 ATP-dependent metalloprotease YP_048813.1 768185 D 218491 CDS YP_048814.1 50119647 2883365 770241..771074 1 NC_004547.2 catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate and 4-aminobenzoate; dihydropteroate synthase 771074 folP 2883365 folP Pectobacterium atrosepticum SCRI1043 dihydropteroate synthase YP_048814.1 770241 D 218491 CDS YP_048815.1 50119648 2882003 771082..772419 1 NC_004547.2 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 772419 glmM 2882003 glmM Pectobacterium atrosepticum SCRI1043 phosphoglucosamine mutase YP_048815.1 771082 D 218491 CDS YP_048816.1 50119649 2881858 772470..772658 1 NC_004547.2 Doubtful CDS. No significant database matches.; hypothetical protein 772658 2881858 ECA0701 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048816.1 772470 D 218491 CDS YP_048817.1 50119650 2884410 772670..773002 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 protein-export membrane protein SecG or b3175 or c3931 or z4537 or ecs4054 SWALL:SECG_ECOLI (SWALL:P33582) (110 aa) fasta scores: E(): 4e-27, 77.27% id in 110 aa; preprotein translocase subunit SecG 773002 secG 2884410 secG Pectobacterium atrosepticum SCRI1043 preprotein translocase subunit SecG YP_048817.1 772670 D 218491 CDS YP_048818.1 50119651 2881521 complement(773967..774146) 1 NC_004547.2 No significant database matches.; hypothetical protein 774146 2881521 ECA0704 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048818.1 773967 R 218491 CDS YP_048819.1 50119652 2881522 complement(774296..>774733) 1 NC_004547.2 Partial CDS. Similar to an internal region of Agrobacterium tumefaciens non-ribosomal peptide synthetase MtaD or atu3682 or agr_l_2311 SWALL:Q8U9P4 (EMBL:AE009297) (2399 aa) fasta scores: E(): 0.00074, 32.99% id in 97 aa, and to Anabaena sp. peptide synthetase all2648 SWALL:Q8YTR5 (EMBL:AP003590) (2588 aa) fasta scores: E(): 0.0032, 34.4% id in 93 aa; degenerate non-ribosomal peptide synthetase (partial) >774733 2881522 ECA0705 Pectobacterium atrosepticum SCRI1043 degenerate non-ribosomal peptide synthetase (partial) YP_048819.1 774296 R 218491 CDS YP_048820.1 50119653 2881523 complement(<774826..>775116) 1 NC_004547.2 Partial CDS. Similar to an internal region of Anabaena sp. peptide synthetase all2644 SWALL:Q8YTR9 (EMBL:AP003590) (2617 aa) fasta scores: E(): 0.00014, 34.44% id in 90 aa, and to Streptomyces coelicolor cda peptide synthetase i cdapsi or sco3230 or sce63.03C SWALL:Q9Z4X6 (EMBL:AL939115) (7463 aa) fasta scores: E(): 0.00077, 36% id in 100 aa; degenerate non-ribosomal peptide synthetase (partial) >775116 2881523 ECA0706 Pectobacterium atrosepticum SCRI1043 degenerate non-ribosomal peptide synthetase (partial) YP_048820.1 <774826 R 218491 CDS YP_048821.1 50119654 2885307 complement(775623..>775718) 1 NC_004547.2 Partial CDS. Similar to Pectobacterium carotovorum subsp. carotovorum hypothetical protein SWALL:Q8GCQ9 (EMBL:AY167733) (197 aa) fasta scores: E(): 1.1e-08, 80.64% id in 31 aa; hypothetical protein >775718 2885307 ECA0707A Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048821.1 775623 R 218491 CDS YP_048822.1 50119655 2884822 776322..776672 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum virulence regulator Evr SWALL:AAN86997 (EMBL:AY167733) (204 aa) fasta scores: E(): 4.8e-39, 92.98% id in 114 aa. This CDS is truncated at the N-terminus relative to its orthologue in Pectobacterium carotovorum subsp. carotovorum.; virulence regulator 776672 evr 2884822 evr Pectobacterium atrosepticum SCRI1043 virulence regulator YP_048822.1 776322 D 218491 CDS YP_048823.1 50119656 2885308 777129..777248 1 NC_004547.2 Doubtful CDS. No significant database matches.; hypothetical protein 777248 2885308 ECA0709 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048823.1 777129 D 218491 CDS YP_048824.2 161501882 2884829 777277..777729 1 NC_004547.2 in Streptococcus pneumoniae this gene was found to be essential; structure determination of the Streptococcus protein shows that it is similar to a number of other proteins; hypothetical protein 777729 2884829 ECA0710 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048824.2 777277 D 218491 CDS YP_048825.1 50119658 2883791 777751..779280 1 NC_004547.2 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 779280 nusA 2883791 nusA Pectobacterium atrosepticum SCRI1043 transcription elongation factor NusA YP_048825.1 777751 D 218491 CDS YP_048826.1 50119659 2881771 779306..782008 1 NC_004547.2 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 782008 infB 2881771 infB Pectobacterium atrosepticum SCRI1043 translation initiation factor IF-2 YP_048826.1 779306 D 218491 CDS YP_048827.1 50119660 2882884 782083..782481 1 NC_004547.2 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 782481 rbfA 2882884 rbfA Pectobacterium atrosepticum SCRI1043 ribosome-binding factor A YP_048827.1 782083 D 218491 CDS YP_048828.1 50119661 2884234 782481..783425 1 NC_004547.2 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 783425 truB 2884234 truB Pectobacterium atrosepticum SCRI1043 tRNA pseudouridine synthase B YP_048828.1 782481 D 218491 CDS YP_048829.1 50119662 2884466 783547..783816 1 NC_004547.2 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 783816 rpsO 2884466 rpsO Pectobacterium atrosepticum SCRI1043 30S ribosomal protein S15 YP_048829.1 783547 D 218491 CDS YP_048830.1 50119663 2883240 784066..786186 1 NC_004547.2 Similar to Escherichia coli polyribonucleotide nucleotidyltransferase Pnp or b3164 SWALL:PNP_ECOLI (SWALL:P05055) (711 aa) fasta scores: E(): 0, 88.88% id in 702 aa; polynucleotide phosphorylase 786186 pnp 2883240 pnp Pectobacterium atrosepticum SCRI1043 polynucleotide phosphorylase YP_048830.1 784066 D 218491 CDS YP_048831.1 50119664 2881995 786310..787194 1 NC_004547.2 lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; lipoprotein NlpI 787194 nlpI 2881995 nlpI Pectobacterium atrosepticum SCRI1043 lipoprotein NlpI YP_048831.1 786310 D 218491 CDS YP_048832.1 50119665 2884757 787369..789282 1 NC_004547.2 participates in the assembly of the large subunit of the ribosome; plays a key role in optimal cell growth at low temperature and is required for normal cell division; ATP-dependent RNA helicase DeaD 789282 deaD 2884757 deaD Pectobacterium atrosepticum SCRI1043 ATP-dependent RNA helicase DeaD YP_048832.1 787369 D 218491 CDS YP_048833.1 50119666 2884831 complement(790573..791451) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3480 SWALL:Q8ZBD6 (EMBL:AJ414157) (292 aa) fasta scores: E(): 2.5e-100, 79.72% id in 291 aa, and to Escherichia coli hypothetical protein YhbV SWALL:YHBV_ECOLI (SWALL:P45475) (298 aa) fasta scores: E(): 3.9e-93, 75.86% id in 290 aa.; hypothetical protein 791451 2884831 ECA0721 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048833.1 790573 R 218491 CDS YP_048834.1 50119667 2884770 complement(791463..792458) 1 NC_004547.2 Similar to Proteus mirabilis STM-protease A SWALL:Q9ZA85 (EMBL:AF088981) (334 aa) fasta scores: E(): 3.6e-114, 82.03% id in 334 aa, and to Escherichia coli O157:H7 collagenase yhbu SWALL:Q8XA91 (EMBL:AE005544) (331 aa) fasta scores: E(): 1.3e-122, 87.61% id in 331 aa.; protease 792458 2884770 ECA0722 Pectobacterium atrosepticum SCRI1043 protease YP_048834.1 791463 R 218491 CDS YP_048835.1 50119668 2884771 792815..793339 1 NC_004547.2 Similar to Yersinia pestis lipid carrier protein ypo3477 SWALL:Q8ZBD9 (EMBL:AJ414157) (173 aa) fasta scores: E(): 3.9e-49, 74.71% id in 174 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein YhbT SWALL:YHBT_ECOLI (SWALL:P45474) (174 aa) fasta scores: E(): 6.7e-44, 71.25% id in 160 aa; sterol transferase 793339 2884771 ECA0723 Pectobacterium atrosepticum SCRI1043 sterol transferase YP_048835.1 792815 D 218491 CDS YP_048836.1 50119669 2884772 793333..793875 1 NC_004547.2 Similar to Yersinia pestis acetyltransferase ypo3476 SWALL:AAM84296 (EMBL:AJ414157) (168 aa) fasta scores: E(): 2.7e-45, 70.55% id in 180 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical acetyltransferase YhbS SWALL:YHBS_ECOLI (SWALL:P45473) (167 aa) fasta scores: E(): 2.1e-40, 64.24% id in 179 aa.; acetyltransferase 793875 2884772 ECA0724 Pectobacterium atrosepticum SCRI1043 acetyltransferase YP_048836.1 793333 D 218491 CDS YP_048837.1 50119670 2884773 complement(793859..794170) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3475 SWALL:YY75_YERPE (SWALL:Q8ZBE1) (95 aa) fasta scores: E(): 4.5e-25, 80% id in 85 aa, and to Escherichia coli hypothetical protein YhbQ SWALL:YHBQ_ECOLI (SWALL:P45472) (100 aa) fasta scores: E(): 1.4e-18, 70.51% id in 78 aa.; GIY-YIG nuclease superfamily protein 794170 2884773 ECA0725 Pectobacterium atrosepticum SCRI1043 GIY-YIG nuclease superfamily protein YP_048837.1 793859 R 218491 CDS YP_048838.1 50119671 2884655 794458..794616 1 NC_004547.2 Doubtful CDS. No significant database matches.; hypothetical protein 794616 2884655 ECA0726 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048838.1 794458 D 218491 CDS YP_048839.1 50119672 2883785 794943..795722 1 NC_004547.2 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 795722 deoC 2883785 deoC Pectobacterium atrosepticum SCRI1043 deoxyribose-phosphate aldolase YP_048839.1 794943 D 218491 CDS YP_048840.1 50119673 2883783 795852..797180 1 NC_004547.2 Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate; thymidine phosphorylase 797180 deoA 2883783 deoA Pectobacterium atrosepticum SCRI1043 thymidine phosphorylase YP_048840.1 795852 D 218491 CDS YP_048841.1 50119674 2883784 797270..798493 1 NC_004547.2 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 798493 deoB 2883784 deoB Pectobacterium atrosepticum SCRI1043 phosphopentomutase YP_048841.1 797270 D 218491 CDS YP_048842.1 50119675 2883628 798538..799257 1 NC_004547.2 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; purine nucleoside phosphorylase 799257 deoD 2883628 deoD Pectobacterium atrosepticum SCRI1043 purine nucleoside phosphorylase YP_048842.1 798538 D 218491 CDS YP_048843.1 50119676 2883138 799578..801830 1 NC_004547.2 Similar to Yersinia enterocolitica ferrichrome receptor FcuA precursor FcuA SWALL:FCUA_YEREN (SWALL:Q05202) (758 aa) fasta scores: E(): 2.6e-175, 59.78% id in 756 aa, and to Bordetella bronchiseptica ferric siderophore receptor BfrB SWALL:P94265 (EMBL:U77671) (734 aa) fasta scores: E(): 1.2e-99, 39.86% id in 725 aa; ferric siderophore TonB-dependent receptor 801830 fcuA 2883138 fcuA Pectobacterium atrosepticum SCRI1043 ferric siderophore TonB-dependent receptor YP_048843.1 799578 D 218491 CDS YP_048844.1 50119677 2884656 complement(801920..802399) 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo3993 SWALL:Q8ZA27 (EMBL:AJ414160) (159 aa) fasta scores: E(): 4.2e-40, 67.08% id in 158 aa.; hypothetical protein 802399 2884656 ECA0732 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048844.1 801920 R 218491 CDS YP_048845.1 50119678 2884734 complement(802602..803045) 1 NC_004547.2 alanine acetyltransferase that specifically acetylates ribosomal protein S18; ribosomal-protein-alanine N-acetyltransferase 803045 rimI 2884734 rimI Pectobacterium atrosepticum SCRI1043 ribosomal-protein-alanine N-acetyltransferase YP_048845.1 802602 R 218491 CDS YP_048846.1 50119679 2882119 complement(802996..803427) 1 NC_004547.2 with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; DNA polymerase III subunit psi 803427 holD 2882119 holD Pectobacterium atrosepticum SCRI1043 DNA polymerase III subunit psi YP_048846.1 802996 R 218491 CDS YP_048847.1 50119680 2884450 803587..804633 1 NC_004547.2 16S rRNA M2G1207 methyltransferase; one of many enzymes that modify bases of the ribosomal RNA; this enzyme methylates the G at position 1207 of the small ribosomal subunit; 16S ribosomal RNA m2G1207 methyltransferase 804633 rsmC 2884450 rsmC Pectobacterium atrosepticum SCRI1043 16S ribosomal RNA m2G1207 methyltransferase YP_048847.1 803587 D 218491 CDS YP_048848.1 50119681 2884657 complement(804636..805628) 1 NC_004547.2 Similar to Pseudomonas aeruginosa probable oxidoreductase pa2535 SWALL:Q9I0U9 (EMBL:AE004681) (331 aa) fasta scores: E(): 2.8e-91, 70.6% id in 330 aa, and to Salmonella typhi aldo/keto reductase sty0158 SWALL:Q8Z9G1 (EMBL:AL627265) (329 aa) fasta scores: E(): 1.5e-88, 69.69% id in 330 aa.; aldo/keto reductase 805628 2884657 ECA0736 Pectobacterium atrosepticum SCRI1043 aldo/keto reductase YP_048848.1 804636 R 218491 CDS YP_048849.1 50119682 2884785 805742..806647 1 NC_004547.2 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2534 SWALL:Q9I0V0 (EMBL:AE004681) (303 aa) fasta scores: E(): 9.2e-53, 51.16% id in 301 aa; LysR family transcriptional regulator 806647 2884785 ECA0737 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_048849.1 805742 D 218491 CDS YP_048850.1 50119683 2884786 complement(807282..807521) 1 NC_004547.2 Similar to Yersinia pestis hypothetical y3754 SWALL:AAM87300 (EMBL:AE013978) (108 aa) fasta scores: E(): 8.3e-16, 46.66% id in 90 aa, and to Yersinia pestis membrane protein ypo0426 SWALL:Q8ZIR4 (EMBL:AJ414142) (79 aa) fasta scores: E(): 2.3e-13, 50.68% id in 73 aa.; hypothetical protein 807521 2884786 ECA0738 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048850.1 807282 R 218491 CDS YP_048851.1 50119684 2881862 complement(807679..808581) 1 NC_004547.2 Similar to Klebsiella terrigena bud operon transcriptional regulator BudR SWALL:BUDR_KLETE (SWALL:P52666) (290 aa) fasta scores: E(): 1.3e-47, 48.44% id in 289 aa, and to Salmonella typhimurium transcriptional regulator StmR SWALL:Q9RQ20 (EMBL:AF134978) (292 aa) fasta scores: E(): 2.6e-35, 37.71% id in 289 aa; LysR family transcriptional regulator 808581 budR 2881862 budR Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_048851.1 807679 R 218491 CDS YP_048852.1 50119685 2882299 808710..809492 1 NC_004547.2 Similar to Enterobacter aerogenes alpha-acetolactate decarboxylase aldC SWALL:ALDC_ENTAE (SWALL:P05361) (260 aa) fasta scores: E(): 6.2e-63, 59.76% id in 251 aa, and to Klebsiella terrigena alpha-acetolactate decarboxylase budA SWALL:ALDC_KLETE (SWALL:Q04518) (259 aa) fasta scores: E(): 1.1e-62, 58.26% id in 254 aa; alpha-acetolactate decarboxylase 809492 budA 2882299 budA Pectobacterium atrosepticum SCRI1043 alpha-acetolactate decarboxylase YP_048852.1 808710 D 218491 CDS YP_048853.1 50119686 2881860 809514..811193 1 NC_004547.2 catalyzes the formation of 2-acetolactate from pyruvate in stationary phase; acetolactate synthase 811193 budB 2881860 budB Pectobacterium atrosepticum SCRI1043 acetolactate synthase YP_048853.1 809514 D 218491 CDS YP_048854.1 50119687 2883482 complement(811260..812414) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 lactaldehyde reductase FucO or b2799 or z4116 or ecs3659 SWALL:FUCO_ECOLI (SWALL:P11549) (383 aa) fasta scores: E(): 1.5e-104, 73.69% id in 384 aa; L-1,2-propanediol oxidoreductase 812414 fucO 2883482 fucO Pectobacterium atrosepticum SCRI1043 L-1,2-propanediol oxidoreductase YP_048854.1 811260 R 218491 CDS YP_048855.1 50119688 2881790 812975..814090 1 NC_004547.2 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; glycine cleavage system aminomethyltransferase T 814090 gcvT 2881790 gcvT Pectobacterium atrosepticum SCRI1043 glycine cleavage system aminomethyltransferase T YP_048855.1 812975 D 218491 CDS YP_048856.1 50119689 2882289 814149..814541 1 NC_004547.2 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; glycine cleavage system protein H 814541 gcvH 2882289 gcvH Pectobacterium atrosepticum SCRI1043 glycine cleavage system protein H YP_048856.1 814149 D 218491 CDS YP_048857.1 50119690 2882290 814656..817529 1 NC_004547.2 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; glycine dehydrogenase 817529 gcvP 2882290 gcvP Pectobacterium atrosepticum SCRI1043 glycine dehydrogenase YP_048857.1 814656 D 218491 CDS YP_048858.1 50119691 2884787 complement(817798..818163) 1 NC_004547.2 Similar to Bradyrhizobium japonicum transcriptional regulatory protein bll5370 SWALL:BAC50635 (EMBL:AP005954) (128 aa) fasta scores: E(): 2.4e-12, 48.51% id in 101 aa, and to Anabaena sp. hypothetical proteinalr2106 SWALL:Q8YV75 (EMBL:AP003588) (110 aa) fasta scores: E(): 6e-12, 41.5% id in 106 aa. Note that there are no significant database matches to enterobacterial species.; transcriptional regulator 818163 2884787 ECA0746 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_048858.1 817798 R 218491 CDS YP_048859.1 50119692 2884079 818265..819005 1 NC_004547.2 Similar to Agrobacterium tumefaciens NAD/NADP dependent oxidoreductase atu5391 or agr_pat_564 SWALL:Q8UJT4 (EMBL:AE008960) (286 aa) fasta scores: E(): 4.9e-43, 52.4% id in 250 aa, and to Bradyrhizobium japonicum oxidoreductase bll5108 SWALL:BAC50373 (EMBL:AP005953) (281 aa) fasta scores: E(): 1e-29, 43.21% id in 243 aa; short chain dehydrogenase 819005 2884079 ECA0747 Pectobacterium atrosepticum SCRI1043 short chain dehydrogenase YP_048859.1 818265 D 218491 CDS YP_048860.1 50119693 2884080 819141..820013 1 NC_004547.2 Similar to Bradyrhizobium japonicum protein bll4140 SWALL:BAC49405 (EMBL:AP005950) (325 aa) fasta scores: E(): 4.8e-47, 48.18% id in 276 aa, and to Bifidobacterium longum sugar permease of ABC transporter system bl0189 SWALL:AAN24043 (EMBL:AE014636) (317 aa) fasta scores: E(): 7.2e-31, 34.73% id in 285 aa. Note that there are no significant database matches to enterobacterial species.; binding-protein-dependent transport system protein 820013 2884080 ECA0748 Pectobacterium atrosepticum SCRI1043 binding-protein-dependent transport system protein YP_048860.1 819141 D 218491 CDS YP_048861.1 50119694 2884081 820003..820902 1 NC_004547.2 Similar to Bradyrhizobium japonicum protein bll4139 SWALL:BAC49404 (EMBL:AP005950) (289 aa) fasta scores: E(): 2.1e-57, 52.98% id in 268 aa, and to Oceanobacillus iheyensis sugar binding-protein dependent transporter system permease ob3422 SWALL:BAC15378 (EMBL:AP004604) (269 aa) fasta scores: E(): 4.8e-32, 33.58% id in 265 aa; binding-protein-dependent transport system protein 820902 2884081 ECA0749 Pectobacterium atrosepticum SCRI1043 binding-protein-dependent transport system protein YP_048861.1 820003 D 218491 CDS YP_048862.1 50119695 2884082 821149..821973 1 NC_004547.2 Similar to Ralstonia solanacearum hypothetical protein rsc1795 SWALL:Q8XYG3 (EMBL:AL646066) (282 aa) fasta scores: E(): 8.5e-24, 31.4% id in 277 aa, and to Streptomyces avermitilis cyclic nucleotide phosphodiesterase SWALL:Q93GX3 (EMBL:AB070957) (257 aa) fasta scores: E(): 3.8e-15, 26.64% id in 259 aa.; calcineurin-like phosphoesterase 821973 2884082 ECA0750 Pectobacterium atrosepticum SCRI1043 calcineurin-like phosphoesterase YP_048862.1 821149 D 218491 CDS YP_048863.1 50119696 2883875 821973..823061 1 NC_004547.2 Similar to Escherichia coli sn-glycerol-3-phosphate transport ATP-binding protein UgpC or b3450 SWALL:UGPC_ECOLI (SWALL:P10907) (356 aa) fasta scores: E(): 7.9e-56, 47.05% id in 357 aa, and to Salmonella typhimurium maltose/maltodextrin transport ATP-binding protein MalK or stm4230 SWALL:MALK_SALTY (SWALL:P19566) (369 aa) fasta scores: E(): 6.8e-54, 47.58% id in 372 aa; sugar ABC transporter ATP-binding protein 823061 2883875 ECA0751 Pectobacterium atrosepticum SCRI1043 sugar ABC transporter ATP-binding protein YP_048863.1 821973 D 218491 CDS YP_048864.1 50119697 2883876 823054..824361 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 glycerol-3-phosphate-binding periplasmic protein precursor UgpB or b3453 or z4822 or ecs4299 SWALL:UGPB_ECOLI (SWALL:P10904) (438 aa) fasta scores: E(): 4e-21, 27.46% id in 386 aa, and to Bradyrhizobium japonicum Bll4138 protein bll4138 SWALL:BAC49403 (EMBL:AP005950) (444 aa) fasta scores: E(): 5.7e-71, 47.5% id in 440 aa; sugar ABC transporter periplasmic-binding protein 824361 2883876 ECA0752 Pectobacterium atrosepticum SCRI1043 sugar ABC transporter periplasmic-binding protein YP_048864.1 823054 D 218491 CDS YP_048865.1 50119698 2882882 complement(824423..825685) 1 NC_004547.2 lactose/proton symporter; mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides; member of major facilitator superfamily; functions as a monomer with 12 transmembrane segments; galactoside permease 825685 lacY 2882882 lacY Pectobacterium atrosepticum SCRI1043 galactoside permease YP_048865.1 824423 R 218491 CDS YP_048866.1 50119699 2882881 complement(825780..827924) 1 NC_004547.2 Similar to Escherichia coli alpha-galactosidase RafA SWALL:RAFA_ECOLI (SWALL:P16551) (708 aa) fasta scores: E(): 7.5e-208, 67.66% id in 705 aa.; alpha-galactosidase 827924 rafA 2882881 rafA Pectobacterium atrosepticum SCRI1043 alpha-galactosidase YP_048866.1 825780 R 218491 CDS YP_048867.1 50119700 2882883 complement(828144..829148) 1 NC_004547.2 Similar to Escherichia coli raffinose operon repressor RafR SWALL:RAFR_ECOLI (SWALL:P21867) (335 aa) fasta scores: E(): 7.5e-64, 52.87% id in 331 aa; LysR family transcriptional regulator 829148 rafR 2882883 rafR Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_048867.1 828144 R 218491 CDS YP_048868.1 50119701 2883552 complement(829202..829810) 1 NC_004547.2 Similar to Vibrio pelagius hypothetical protein SWALL:AAN86353 (EMBL:AY014401) (195 aa) fasta scores: E(): 6.6e-31, 48.37% id in 184 aa, and to Deinococcus radiodurans hypothetical protein dr0704 SWALL:Q9RWG4 (EMBL:AE001927) (198 aa) fasta scores: E(): 1.2e-20, 38.77% id in 196 aa. Note that there are no significant database matches to enterobacterial species.; hypothetical protein 829810 2883552 ECA0756 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048868.1 829202 R 218491 CDS YP_048869.1 50119702 2883553 830229..830876 1 NC_004547.2 Similar to Bacillus cereus hemolysin III SWALL:HLY3_BACCE (SWALL:P54176) (219 aa) fasta scores: E(): 3.8e-35, 44.6% id in 213 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein yqfa or b2899 or c3480 or z4237 or ecs3771 or sf2885 SWALL:YQFA_ECOLI (SWALL:Q46827) (219 aa) fasta scores: E(): 4e-68, 83.98% id in 206 aa; hypothetical protein 830876 2883553 ECA0757 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048869.1 830229 D 218491 CDS YP_048870.1 50119703 2883554 complement(831100..832101) 1 NC_004547.2 physiological role is not clear; not essential for growth but mutants grow poorly; mutations suppress hda null mutations; may be involved in regulation of ATP-DnaA levels; may also be involved in regulation of tRNA modifications; can bind folic acid and tetrahydrofolate; forms a three domain ring-like structure with a central channel; structurally similar to DMGO protein from A. globiformis; shows sequence similarity to yeast CAF17 transcriptional regulator; global regulator 832101 2883554 ECA0758 Pectobacterium atrosepticum SCRI1043 global regulator YP_048870.1 831100 R 218491 CDS YP_048871.1 50119704 2883523 832337..832603 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo0897 SWALL:Q8ZHJ5 (EMBL:AJ414145) (88 aa) fasta scores: E(): 4.2e-29, 77.27% id in 88 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein YgfY SWALL:YGFY_ECOLI (SWALL:Q46825) (88 aa) fasta scores: E(): 3.4e-28, 73.86% id in 88 aa.; hypothetical protein 832603 2883523 ECA0759 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048871.1 832337 D 218491 CDS YP_048872.1 50119705 2883524 832584..832997 1 NC_004547.2 Similar to Escherichia coli hypothetical protein YgfX SWALL:YGFX_ECOLI (SWALL:Q46824) (135 aa) fasta scores: E(): 3.6e-29, 56.39% id in 133 aa.; hypothetical protein 832997 2883524 ECA0760 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048872.1 832584 D 218491 CDS YP_048873.1 50119706 2883525 833305..834240 1 NC_004547.2 Similar to Salmonella typhimurium SAM-dependent methyltransferase stm0826 SWALL:Q8ZQN4 (EMBL:AE008734) (308 aa) fasta scores: E(): 9.1e-81, 62.54% id in 307 aa, and to Escherichia coli hypothetical protein YbiN SWALL:YBIN_ECOLI (SWALL:P75782) (308 aa) fasta scores: E(): 1e-79, 61.23% id in 307 aa.; SAM-dependent methyltransferase 834240 2883525 ECA0761 Pectobacterium atrosepticum SCRI1043 SAM-dependent methyltransferase YP_048873.1 833305 D 218491 CDS YP_048874.1 50119707 2883418 complement(834358..834681) 1 NC_004547.2 Similar to Xanthomonas campestris hypothetical protein Xcc0818 SWALL:Q8PCB6 (EMBL:AE012181) (122 aa) fasta scores: E(): 2.6e-06, 38.46% id in 104 aa. Note that there are no other significant database matches.; lipoprotein 834681 2883418 ECA0762 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_048874.1 834358 R 218491 CDS YP_048875.1 50119708 2881793 complement(834710..835228) 1 NC_004547.2 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic; flavodoxin FldB 835228 fldB 2881793 fldB Pectobacterium atrosepticum SCRI1043 flavodoxin FldB YP_048875.1 834710 R 218491 CDS YP_048876.1 50119709 2883419 835456..835632 1 NC_004547.2 No significant database matches. Possible false CDS.; hypothetical protein 835632 2883419 ECA0764 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048876.1 835456 D 218491 CDS YP_048877.1 50119710 2883420 complement(835647..836093) 1 NC_004547.2 Similar to Xanthomonas axonopodis hypothetical protein xac2605 SWALL:Q8PJD0 (EMBL:AE011901) (147 aa) fasta scores: E(): 5.7e-05, 40.54% id in 74 aa, and to Caulobacter crescentus hypothetical protein cc2994 SWALL:Q9A449 (EMBL:AE005962) (137 aa) fasta scores: E(): 8.4e-05, 35.08% id in 114 aa. Note that there are no significant database matches to enterobacterial species.; hypothetical protein 836093 2883420 ECA0765 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048877.1 835647 R 218491 CDS YP_048878.1 50119711 2883421 complement(836294..836902) 1 NC_004547.2 Similar to Xanthomonas campestris hypothetical protein xcc3622 SWALL:Q8P4T4 (EMBL:AE012483) (232 aa) fasta scores: E(): 5.2e-16, 36.15% id in 177 aa, and to Xanthomonas axonopodis hypothetical protein xac0573 SWALL:Q8PPW0 (EMBL:AE011684) (232 aa) fasta scores: E(): 7.7e-15, 35.02% id in 177 aa. Note that the only significant database matches are to Xanthomonas campestris.; hypothetical protein 836902 2883421 ECA0766 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048878.1 836294 R 218491 CDS YP_048879.1 50119712 2883383 complement(837169..837669) 1 NC_004547.2 Similar to Xanthomonas campestris hypothetical protein xcc3298 SWALL:Q8P5N8 (EMBL:AE012447) (171 aa) fasta scores: E(): 3e-10, 33.33% id in 174 aa, and to Xanthomonas campestris hypothetical protein xcc3128 SWALL:Q8P649 (EMBL:AE012428) (182 aa) fasta scores: E(): 3.2e-10, 34.44% id in 180 aa. Note that the only significant database matches are to Xanthomonas spp.; hypothetical protein 837669 2883383 ECA0767 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048879.1 837169 R 218491 CDS YP_048880.1 50119713 2883384 complement(837920..838096) 1 NC_004547.2 No significant database matches.; hypothetical protein 838096 2883384 ECA0768 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048880.1 837920 R 218491 CDS YP_048881.1 50119714 2883385 complement(838230..839555) 1 NC_004547.2 Similar to Shigella flexneri transport protein sf3555 SWALL:AAN45008 (EMBL:AE015363) (440 aa) fasta scores: E(): 7.7e-133, 82.08% id in 441 aa, and to Escherichia coli hypothetical metabolite transport protein YhjE SWALL:YHJE_ECOLI (SWALL:P37643) (440 aa) fasta scores: E(): 2.6e-132, 81.63% id in 441 aa and to Escherichia coli shikimate transporter ShiA SWALL:SHIA_ECOLI (SWALL:P76350) (438 aa) fasta scores: E(): 1.5e-47, 36.01% id in 447 aa; transporter 839555 2883385 ECA0769 Pectobacterium atrosepticum SCRI1043 transporter YP_048881.1 838230 R 218491 CDS YP_048882.1 50119715 2882648 839867..840766 1 NC_004547.2 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerD 840766 xerD 2882648 xerD Pectobacterium atrosepticum SCRI1043 site-specific tyrosine recombinase XerD YP_048882.1 839867 D 218491 CDS YP_048883.1 50119716 2882416 840892..841608 1 NC_004547.2 DsbC; periplasmic protein with protein disulfide isomerase activity; this protein also shows disulfide oxidoreductase activity; thiol:disulfide interchange protein DsbC 841608 dsbC 2882416 dsbC Pectobacterium atrosepticum SCRI1043 thiol:disulfide interchange protein DsbC YP_048883.1 840892 D 218491 CDS YP_048884.1 50119717 2885105 841615..843360 1 NC_004547.2 5'-3' single-stranded-DNA-specific exonuclease; ssDNA exonuclease RecJ 843360 recJ 2885105 recJ Pectobacterium atrosepticum SCRI1043 ssDNA exonuclease RecJ YP_048884.1 841615 D 218491 CDS YP_048885.1 50119718 2882307 join(843475..843549,843551..844573) 1 NC_004547.2 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 844573 prfB 2882307 prfB Pectobacterium atrosepticum SCRI1043 peptide chain release factor 2 YP_048885.1 843475 D 218491 CDS YP_048886.1 50119719 2882228 844582..846099 1 NC_004547.2 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 846099 lysS 2882228 lysS Pectobacterium atrosepticum SCRI1043 lysyl-tRNA synthetase YP_048886.1 844582 D 218491 CDS YP_048887.1 50119720 2883283 846356..847111 1 NC_004547.2 Similar to Pseudomonas aeruginosa ChpD SWALL:O87004 (EMBL:U79580) (264 aa) fasta scores: E(): 8.8e-26, 38.49% id in 239 aa, and to Pseudomonas putida transcriptional regulator, AraC family pp2383 SWALL:AAN67996 (EMBL:AE016783) (281 aa) fasta scores: E(): 6.6e-15, 32.51% id in 243 aa. Note that there are no significant database matches to enterobacterial species.; AraC family transcriptional regulator 847111 2883283 ECA0775 Pectobacterium atrosepticum SCRI1043 AraC family transcriptional regulator YP_048887.1 846356 D 218491 CDS YP_048888.1 50119721 2883284 847174..847857 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein pa1620 SWALL:Q9I3A2 (EMBL:AE004589) (213 aa) fasta scores: E(): 5.3e-07, 27.31% id in 216 aa. Note that there are no significant database matches to enterobacterial species.; hypothetical protein 847857 2883284 ECA0776 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048888.1 847174 D 218491 CDS YP_048889.1 50119722 2883285 848523..849212 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri phage shock protein a pspa or b1304 or z2482 or ecs1881 or sf1309 SWALL:PSPA_ECOLI (SWALL:P23853) (221 aa) fasta scores: E(): 0.00016, 20% id in 225 aa, and to Oceanobacillus iheyensis phage shock protein a ob0940 SWALL:BAC12896 (EMBL:AP004596) (223 aa) fasta scores: E(): 7.9e-11, 26.87% id in 227 aa; hypothetical protein 849212 2883285 ECA0777 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048889.1 848523 D 218491 CDS YP_048890.1 50119723 2883159 849288..851009 1 NC_004547.2 No significant database matches.; hypothetical protein 851009 2883159 ECA0778 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048890.1 849288 D 218491 CDS YP_048891.1 50119724 2883160 851060..851452 1 NC_004547.2 Similar to Bacillus subtilis hypothetical protein YybH yybH SWALL:YYBH_BACSU (SWALL:P37496) (129 aa) fasta scores: E(): 3.6e-22, 53.22% id in 124 aa. Note that there are no significant database matches to enterobacterial species.; hypothetical protein 851452 2883160 ECA0779 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048891.1 851060 D 218491 CDS YP_048892.1 50119725 2883161 complement(851563..852633) 1 NC_004547.2 Similar to Xanthomonas campestris regulatory protein RpfI SWALL:Q8P9L0 (EMBL:AE012287) (342 aa) fasta scores: E(): 1.6e-36, 37.79% id in 344 aa. The Xanthomonas campestris RpfI is thought to be involved in the regulation of pathogenicity factor production. Note that there are no significant database matches to enterobacterial species.; hypothetical protein 852633 2883161 ECA0780 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048892.1 851563 R 218491 CDS YP_048893.2 161501881 2884755 853012..853935 1 NC_004547.2 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock; lipid A biosynthesis palmitoleoyl acyltransferase 853935 ddg 2884755 ddg Pectobacterium atrosepticum SCRI1043 lipid A biosynthesis palmitoleoyl acyltransferase YP_048893.2 853012 D 218491 CDS YP_048894.1 50119727 2883162 complement(854244..854660) 1 NC_004547.2 No significant database matches.; hypothetical protein 854660 2883162 ECA0782 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048894.1 854244 R 218491 CDS YP_048895.1 50119728 2883048 854876..856231 1 NC_004547.2 Similar to Yersinia pestis xanthine/uracil permease ypo3629 or y0239 SWALL:Q8ZB00 (EMBL:AJ414158) (451 aa) fasta scores: E(): 7.4e-142, 87.58% id in 451 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein yjcd yjcd or b4064 or z5663 or ecs5046 SWALL:YJCD_ECOLI (SWALL:P32702) (449 aa) fasta scores: E(): 4.7e-133, 82.58% id in 448 aa; permease 856231 2883048 ECA0783 Pectobacterium atrosepticum SCRI1043 permease YP_048895.1 854876 D 218491 CDS YP_048896.1 50119729 2883049 856625..858271 1 NC_004547.2 Similar to Yersinia pestis sodium/hydrogen exchanger ypo3630 SWALL:Q8ZAZ9 (EMBL:AJ414158) (549 aa) fasta scores: E(): 4.4e-165, 79.19% id in 548 aa, and to Escherichia coli sodium/hydrogen exchanger SWALL:YJCE_ECOLI (SWALL:P32703) (549 aa) fasta scores: E(): 4.1e-155, 75.45% id in 546 aa; sodium/hydrogen antiporter 858271 2883049 ECA0784 Pectobacterium atrosepticum SCRI1043 sodium/hydrogen antiporter YP_048896.1 856625 D 218491 CDS YP_048897.1 50119730 2882970 858630..859340 1 NC_004547.2 Similar to Alcaligenes eutrophus transcriptional activator protein CzcR czcR SWALL:CZCR_ALCEU (SWALL:Q44006) (225 aa) fasta scores: E(): 8.9e-30, 42.15% id in 223 aa, and to Brucella suis DNA-binding response regulator br0612 SWALL:AAN29541 (EMBL:AE014368) (235 aa) fasta scores: E(): 5.5e-33, 43.27% id in 238 aa; two component system response regulator 859340 2882970 ECA0785 Pectobacterium atrosepticum SCRI1043 two component system response regulator YP_048897.1 858630 D 218491 CDS YP_048898.1 50119731 2882971 859318..860817 1 NC_004547.2 Similar to Pseudomonas putida sensor histidine kinase pp2906 SWALL:AAN68514 (EMBL:AE016784) (463 aa) fasta scores: E(): 2.3e-32, 30.91% id in 427 aa, and to Rhizobium loti sensory histidine protein kinase mlr4459 SWALL:Q98E08 (EMBL:AP003004) (458 aa) fasta scores: E(): 1.2e-30, 31.25% id in 464 aa; two component system sensor kinase 860817 2882971 ECA0786 Pectobacterium atrosepticum SCRI1043 two component system sensor kinase YP_048898.1 859318 D 218491 CDS YP_048899.1 50119732 2882972 861360..861911 1 NC_004547.2 Similar to Rhizobium loti type IV prepilin peptidase, CpaA mlr5594 SWALL:Q98BF9 (EMBL:AP003007) (175 aa) fasta scores: E(): 3.7e-05, 30.53% id in 167 aa, and to Rhizobium meliloti probable CpaA2 pilus assembly protein SWALL:Q92YL6 (EMBL:AE007272) (170 aa) fasta scores: E(): 6.4e-05, 28.48% id in 172 aa; hypothetical protein 861911 2882972 ECA0787 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048899.1 861360 D 218491 CDS YP_048900.1 50119733 2885492 861960..862904 1 NC_004547.2 Similar to Bradyrhizobium japonicum CtpC protein SWALL:BAC45932 (EMBL:AP005937) (270 aa) fasta scores: E(): 2.7e-09, 30.96% id in 281 aa, and to Vibrio vulnificus flp pilus assembly protein CpaB vv12330 SWALL:AAO10705 (EMBL:AE016804) (279 aa) fasta scores: E(): 8.4e-09, 28.94% id in 304 aa; hypothetical protein 862904 2885492 ECA0788 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048900.1 861960 D 218491 CDS YP_048901.1 50119734 2885493 862985..864421 1 NC_004547.2 Similar to Actinobacillus actinomycetemcomitans rough colony protein A RcpA SWALL:Q9X6J1 (EMBL:AF139249) (460 aa) fasta scores: E(): 2.1e-15, 29.2% id in 404 aa, and to Escherichia coli protein transport protein HofQ precursor SWALL:HOFQ_ECOLI (SWALL:P34749) (412 aa) fasta scores: E(): 2.9e-10, 24.71% id in 433 aa, and to Salmonella typhi type II secretion system protein HofQ SWALL:Q8Z206 (EMBL:AL627281) (412 aa) fasta scores: E(): 7e-10, 27.27% id in 253 aa; hypothetical protein 864421 2885493 ECA0789 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048901.1 862985 D 218491 CDS YP_048902.1 50119735 2885494 864443..865129 1 NC_004547.2 Similar to Agrobacterium tumefaciens components of type IV pilus CtpE SWALL:Q8UIS2 (EMBL:AE008995) (250 aa) fasta scores: E(): 0.0024, 23.63% id in 220 aa, and to Rhizobium meliloti hypothetical protein r00142 r00142 or smc04110 SWALL:Q92KU4 (EMBL:AL591782) (226 aa) fasta scores: E(): 0.81, 21.62% id in 222 aa; lipoprotein 865129 2885494 ECA0790 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_048902.1 864443 D 218491 CDS YP_048903.1 50119736 2882334 865144..866343 1 NC_004547.2 Similar to Bradyrhizobium japonicum protein blr3493 SWALL:BAC48758 (EMBL:AP005947) (481 aa) fasta scores: E(): 1.7e-20, 26.68% id in 371 aa, and to Caulobacter crescentus pilus assembly protein CpaE SWALL:Q9A495 (EMBL:AE005958) (517 aa) fasta scores: E(): 7.2e-16, 27.76% id in 371 aa, and to Agrobacterium tumefaciens components of type IV pilus CtpF SWALL:Q8UIS3 (EMBL:AE008995) (462 aa) fasta scores: E(): 5.2e-13, 29.79% id in 292 aa.; Similar to Bradyrhizobium japonicum Blr3493 protein blr3493 SWALL:BAC48758 (EMBL:AP005947) (481 aa) fasta scores: E(): 1.7e-20, 26.68% id in 371 aa; hypothetical protein 866343 2882334 ECA0791 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048903.1 865144 D 218491 CDS YP_048904.1 50119737 2882335 866383..867786 1 NC_004547.2 Similar to Caulobacter crescentus CpaF SWALL:Q9L714 (EMBL:AF229646) (501 aa) fasta scores: E(): 6.1e-65, 45.13% id in 452 aa, and to Bradyrhizobium japonicum component of type iv pilus blr3494 SWALL:BAC48759 (EMBL:AP005947) (458 aa) fasta scores: E(): 1.7e-74, 55.01% id in 429 aa, and to Vibrio vulnificus flp pilus assembly protein vv11755 SWALL:AAO10167 (EMBL:AE016802) (495 aa) fasta scores: E(): 6.7e-66, 44.73% id in 465 aa; type IV pilus protein 867786 2882335 ECA0792 Pectobacterium atrosepticum SCRI1043 type IV pilus protein YP_048904.1 866383 D 218491 CDS YP_048905.1 50119738 2882336 867805..868785 1 NC_004547.2 Similar to Vibrio vulnificus flp pilus assembly protein tadB vv12335 SWALL:AAO10710 (EMBL:AE016804) (294 aa) fasta scores: E(): 7.9e-20, 28.38% id in 310 aa, and to Actinobacillus actinomycetemcomitans TadB SWALL:Q9XC05 (EMBL:AF152598) (295 aa) fasta scores: E(): 7.7e-14, 27.57% id in 243 aa; type IV pilus protein 868785 2882336 ECA0793 Pectobacterium atrosepticum SCRI1043 type IV pilus protein YP_048905.1 867805 D 218491 CDS YP_048906.1 50119739 2882337 868800..869759 1 NC_004547.2 Similar to Vibrio vulnificus flp pilus assembly protein TadC vv12336 SWALL:AAO10711 (EMBL:AE016804) (293 aa) fasta scores: E(): 2.7e-25, 31.34% id in 319 aa, and to Agrobacterium tumefaciens components of type IV pilus CtpI or atu0216 or agr_c_371 SWALL:Q8UIS6 (EMBL:AE008995) (328 aa) fasta scores: E(): 2.7e-24, 34.12% id in 296 aa; type IV pilus protein 869759 2882337 ECA0794 Pectobacterium atrosepticum SCRI1043 type IV pilus protein YP_048906.1 868800 D 218491 CDS YP_048907.1 50119740 2885416 869860..870711 1 NC_004547.2 Similar to Bradyrhizobium japonicum Blr1433 protein blr1433 SWALL:BAC46698 (EMBL:AP005940) (271 aa) fasta scores: E(): 0.00039, 29.04% id in 272 aa, and to Rhizobium loti O-linked glcnac transferase mlr3120 SWALL:Q98GY3 (EMBL:AP003001) (280 aa) fasta scores: E(): 0.00027, 25.61% id in 246 aa; hypothetical protein 870711 2885416 ECA0795 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048907.1 869860 D 218491 CDS YP_048908.1 50119741 2885417 870711..871259 1 NC_004547.2 No significant database matches.; hypothetical protein 871259 2885417 ECA0796 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048908.1 870711 D 218491 CDS YP_048909.1 50119742 2885418 871252..871884 1 NC_004547.2 No significant database matches.; hypothetical protein 871884 2885418 ECA0797 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048909.1 871252 D 218491 CDS YP_048910.1 50119743 2885440 872064..873695 1 NC_004547.2 Similar to Vibrio vulnificus conserved hypothetical protein vv12340 SWALL:AAO10715 (EMBL:AE016804) (465 aa) fasta scores: E(): 0.14, 24.52% id in 424 aa, and to Salmonella typhimurium peptidase b pepb or stm2536 SWALL:PEPB_SALTY (SWALL:Q9RF52) (427 aa) fasta scores: E(): 1.8, 23.39% id in 265 aa; hypothetical protein 873695 2885440 ECA0798 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048910.1 872064 D 218491 CDS YP_048911.1 50119744 2885441 873754..883440 1 NC_004547.2 Similar to Bradyrhizobium japonicum Bll3563 protein bll3563 SWALL:BAC48828 (EMBL:AP005948) (3441 aa) fasta scores: E(): 8.9e-20, 22.46% id in 3387 aa, and to Brucella suis outer membrane autotransporter bra1148 SWALL:AAN34307 (EMBL:AE014607) (3420 aa) fasta scores: E(): 6.1e-08, 22.91% id in 3217 aa; outer membrane protein 883440 2885441 ECA0799 Pectobacterium atrosepticum SCRI1043 outer membrane protein YP_048911.1 873754 D 218491 CDS YP_048912.1 50119745 2885442 883680..885470 1 NC_004547.2 Similar to Chromobacterium violaceum hypothetical protein cv0465 SWALL:Q7P0V0 (EMBL:AE016911) (527 aa) fasta scores: E(): 9.9e-65, 40.31% id in 506 aa; hypothetical protein 885470 2885442 ECA0800 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048912.1 883680 D 218491 CDS YP_048913.1 50119746 2881662 885470..886228 1 NC_004547.2 Similar to Vibrio cholerae hypothetical protein vc0913 SWALL:Q9KTI9 (EMBL:AE004175) (352 aa) fasta scores: E(): 2.3e-10, 26.29% id in 232 aa, and to Shewanella oneidensis HlyD family secretion protein so3483 SWALL:AAN56476 (EMBL:AE015784) (369 aa) fasta scores: E(): 2.4e-09, 25.49% id in 251 aa. Note that there are no significant database matches to enterobacterial species.; hypothetical protein 886228 2881662 ECA0801 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048913.1 885470 D 218491 CDS YP_048914.1 50119747 2881663 886225..887580 1 NC_004547.2 Similar to Vibrio cholerae hypothetical protein vc0913 SWALL:Q9KTI9 (EMBL:AE004175) (352 aa) fasta scores: E(): 1.9e-05, 24.12% id in 228 aa, and to Vibrio cholerae periplasmic linker protein, vc1756 SWALL:Q9KR86 (EMBL:AE004253) (364 aa) fasta scores: E(): 4e-05, 27.53% id in 247 aa.; hypothetical protein 887580 2881663 ECA0802 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048914.1 886225 D 218491 CDS YP_048915.1 50119748 2881664 887598..889712 1 NC_004547.2 hypothetical protein 889712 2881664 ECA0803 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048915.1 887598 D 218491 CDS YP_048916.1 50119749 2884605 890040..891770 1 NC_004547.2 Similar to Erwinia chrysanthemi rhamnogalacturonase precursor RhiE SWALL:Q8RJP2 (EMBL:AJ438339) (578 aa) fasta scores: E(): 1.3e-133, 60.1% id in 554 aa. The only other significant database matches are of eukaryotic origin.; rhamnogalacturonate lyase 891770 rhiE 2884605 rhiE Pectobacterium atrosepticum SCRI1043 rhamnogalacturonate lyase YP_048916.1 890040 D 218491 CDS YP_048917.1 50119750 2881665 complement(891899..892831) 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein sty4288 SWALL:Q8Z220 (EMBL:AL627281) (308 aa) fasta scores: E(): 3.3e-57, 51.82% id in 301 aa, and to Erwinia amylovora hypothetical 37.6 kDa protein SWALL:Q9F805 (EMBL:AF264948) (332 aa) fasta scores: E(): 2.9e-54, 48.67% id in 302 aa, and to Escherichia coli hypothetical protein YfaD SWALL:YFAD_ECOLI (SWALL:P37014) (299 aa) fasta scores: E(): 8.6e-48, 47.82% id in 299 aa.; hypothetical protein 892831 2881665 ECA0805 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048917.1 891899 R 218491 CDS YP_048918.1 50119751 2881362 complement(893086..894744) 1 NC_004547.2 member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease 894744 actP 2881362 actP Pectobacterium atrosepticum SCRI1043 acetate permease YP_048918.1 893086 R 218491 CDS YP_048919.1 50119752 2881363 complement(894741..895052) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri hypothetical protein YjcH SWALL:YJCH_ECOLI (SWALL:P32706) (104 aa) fasta scores: E(): 7.3e-27, 71.56% id in 102 aa, and to Salmonella typhi membrane protein sty4472 SWALL:Q8Z1R1 (EMBL:AL627282) (104 aa) fasta scores: E(): 1.7e-25, 70.58% id in 102 aa; hypothetical protein 895052 2881363 ECA0807 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048919.1 894741 R 218491 CDS YP_048920.1 50119753 2881802 898041..898433 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. atrosepticum global regulatory protein HexY SWALL:Q9RB06 (EMBL:AF182073) (130 aa) fasta scores: E(): 8.2e-49, 99.23% id in 130 aa, and to Pectobacterium carotovorum subsp. carotovorum global regulatory protein HexY or RsmC SWALL:Q9R2P5 (EMBL:AF182072) (130 aa) fasta scores: E(): 9.6e-49, 99.23% id in 130 aa. No other significant database matches.; global regulatory protein 898433 hexY 2881802 hexY Pectobacterium atrosepticum SCRI1043 global regulatory protein YP_048920.1 898041 D 218491 CDS YP_048921.1 50119754 2882178 898436..898591 1 NC_004547.2 hypothetical protein 898591 2882178 ECA0810 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048921.1 898436 D 218491 CDS YP_048922.1 50119755 2882179 899255..901552 1 NC_004547.2 Similar to Vibrio cholerae ferrichrome outer membrane receptor FhuA fhuA SWALL:Q9RF13 (EMBL:AF203702) (700 aa) fasta scores: E(): 2.8e-96, 40.61% id in 687 aa, and to Bradyrhizobium japonicum FegA SWALL:P70921 (EMBL:U61401) (750 aa) fasta scores: E(): 1.5e-78, 35.22% id in 738 aa; TonB-dependent ferrichrome receptor 901552 2882179 ECA0811 Pectobacterium atrosepticum SCRI1043 TonB-dependent ferrichrome receptor YP_048922.1 899255 D 218491 CDS YP_048923.1 50119756 2882180 901717..902241 1 NC_004547.2 Similar to Bordetella avium RhuI SWALL:Q8L1U9 (EMBL:AY095952) (168 aa) fasta scores: E(): 5.1e-26, 45% id in 160 aa, and to Escherichia coli probable RNA polymerase sigma factor feci feci or b4293 SWALL:FECI_ECOLI (SWALL:P23484) (173 aa) fasta scores: E(): 2.1e-22, 43.94% id in 157 aa; RNA polymerase sigma factor 902241 2882180 ECA0813 Pectobacterium atrosepticum SCRI1043 RNA polymerase sigma factor YP_048923.1 901717 D 218491 CDS YP_048924.1 50119757 2881890 902238..903185 1 NC_004547.2 Similar to Escherichia coli protein FecR SWALL:FECR_ECOLI (SWALL:P23485) (317 aa) fasta scores: E(): 4.1e-27, 33.01% id in 315 aa, and to Pseudomonas putida PupR protein SWALL:Q52209 (EMBL:X77918) (324 aa) fasta scores: E(): 3.3e-23, 29.9% id in 321 aa, and to Bordetella avium RhuR SWALL:Q8L1U8 (EMBL:AY095952) (307 aa) fasta scores: E(): 3.3e-17, 27.12% id in 317 aa; iron sensor protein 903185 2881890 ECA0814 Pectobacterium atrosepticum SCRI1043 iron sensor protein YP_048924.1 902238 D 218491 CDS YP_048925.1 50119758 2881891 903368..904378 1 NC_004547.2 Similar to Pseudomonas putida membrane protein, pp4850 SWALL:AAN70419 (EMBL:AE016792) (355 aa) fasta scores: E(): 6.8e-61, 51.66% id in 331 aa, and to Ralstonia solanacearum probable transmembrane protein rsp0411 SWALL:Q8XSQ6 (EMBL:AL646078) (341 aa) fasta scores: E(): 3.4e-43, 42.07% id in 328 aa; hypothetical protein 904378 2881891 ECA0815 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048925.1 903368 D 218491 CDS YP_048926.1 50119759 2881892 904530..905147 1 NC_004547.2 Similar to Clostridium acetobutylicum predicted membrane protein, hemolysin iii homolog cac0947 SWALL:Q97KH2 (EMBL:AE007610) (211 aa) fasta scores: E(): 0.68, 25.25% id in 194 aa; hypothetical protein 905147 2881892 ECA0816 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048926.1 904530 D 218491 CDS YP_048927.1 50119760 2884271 complement(905222..906748) 1 NC_004547.2 Similar to Erwinia chrysanthemi oligogalacturonide transporter TogT SWALL:Q93KC2 (EMBL:AJ305143) (508 aa) fasta scores: E(): 5.8e-176, 84.81% id in 507 aa. Also similar to ECA3560 (40.426% id. in 517 aa overlap); oligogalacturonide transporter 906748 togT 2884271 togT Pectobacterium atrosepticum SCRI1043 oligogalacturonide transporter YP_048927.1 905222 R 218491 CDS YP_048928.1 50119761 2881217 907056..907505 1 NC_004547.2 No significant database matches.; hypothetical protein 907505 2881217 ECA0818 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048928.1 907056 D 218491 CDS YP_048929.1 50119762 2882867 complement(907498..908973) 1 NC_004547.2 Similar to Escherichia coli D-mannonate oxidoreductase UxuB or b4323 SWALL:UXUB_ECOLI (SWALL:P39160) (486 aa) fasta scores: E(): 4.5e-107, 56.03% id in 489 aa, and to Yersinia pestis D-mannonate oxidoreductase ypo1280 or y2903 SWALL:AAM86454 (EMBL:AJ414147) (490 aa) fasta scores: E(): 8.7e-128, 63.93% id in 488 aa. Also similar to ECA0920 (54.906% id. in 479 aa overlap); D-mannonate oxidoreductase 908973 uxuB 2882867 uxuB Pectobacterium atrosepticum SCRI1043 D-mannonate oxidoreductase YP_048929.1 907498 R 218491 CDS YP_048930.1 50119763 2881218 909308..910588 1 NC_004547.2 Similar to Emericella nidulans O-acetyl-L-homoserine sulfhydrylase CysD SWALL:O13387 (EMBL:AF029318) (437 aa) fasta scores: E(): 2.6e-79, 52.47% id in 425 aa, and to Shewanella oneidensis O-acetylhomoserine so1095 SWALL:AAN54166 (EMBL:AE015554) (430 aa) fasta scores: E(): 3.2e-138, 85.21% id in 426 aa; O-acetyl-L-homoserine sulfhydrylase 910588 2881218 ECA0820 Pectobacterium atrosepticum SCRI1043 O-acetyl-L-homoserine sulfhydrylase YP_048930.1 909308 D 218491 CDS YP_048931.1 50119764 2881219 complement(910651..911748) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi periplasmic protein YbiS or SWALL:Q8XFD8 (EMBL:AE008734) (306 aa) fasta scores: E(): 1.9e-74, 67.64% id in 306 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 protein YbiS precursor SWALL:YBIS_ECOLI (SWALL:P75789) (306 aa) fasta scores: E(): 2.8e-74, 67.64% id in 306 aa; hypothetical protein 911748 2881219 ECA0821 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048931.1 910651 R 218491 CDS YP_048932.1 50119765 2881220 complement(911924..912721) 1 NC_004547.2 Similar to Escherichia coli O157:H7 hypothetical protein ybeM SWALL:YBEM_ECO57 (SWALL:P58054) (262 aa) fasta scores: E(): 4.7e-55, 53.25% id in 261 aa; carbon-nitrogen hydrolase 912721 2881220 ECA0822 Pectobacterium atrosepticum SCRI1043 carbon-nitrogen hydrolase YP_048932.1 911924 R 218491 CDS YP_048933.1 50119766 2883173 complement(912743..913279) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri cytochrome B561 CybB or b1418 or sf1794 SWALL:C561_ECOLI (SWALL:P08732) (176 aa) fasta scores: E(): 2.1e-34, 49.71% id in 177 aa; cytochrome B561 913279 cybB 2883173 cybB Pectobacterium atrosepticum SCRI1043 cytochrome B561 YP_048933.1 912743 R 218491 CDS YP_048934.1 50119767 2881431 complement(913553..917086) 1 NC_004547.2 Similar to Rhodospirillum rubrum pyruvate-flavodoxin oxidoreductase NifJ SWALL:NIFJ_RHORU (SWALL:Q53046) (1191 aa) fasta scores: E(): 0, 54.73% id in 1182 aa, and to Escherichia coli probable pyruvate-flavodoxin oxidoreductase ydbk or b1378 SWALL:NIFJ_ECOLI (SWALL:P52647) (1174 aa) fasta scores: E(): 0, 78.79% id in 1174 aa. Also similar to ECA2957 (47.377% id. in 1182 aa overlap); pyruvate-flavodoxin oxidoreductase 917086 2881431 ECA0824 Pectobacterium atrosepticum SCRI1043 pyruvate-flavodoxin oxidoreductase YP_048934.1 913553 R 218491 CDS YP_048935.1 50119768 2881432 917476..917901 1 NC_004547.2 No significant database matches.; hypothetical protein 917901 2881432 ECA0825 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048935.1 917476 D 218491 CDS YP_048936.1 50119769 2881433 918246..918758 1 NC_004547.2 Similar to Pseudomonas aeruginosa probable N-acetyltransferase pa0478 SWALL:Q9I640 (EMBL:AE004485) (158 aa) fasta scores: E(): 1.4e-37, 64.13% id in 145 aa, and to Rhizobium meliloti acetyltransferase protein r00799 SWALL:Q92RQ9 (EMBL:AL591785) (159 aa) fasta scores: E(): 3.2e-34, 57.14% id in 154 aa. Note that there are no significant database matches to enterobacterial species.; GNAT family acetyltransferase 918758 2881433 ECA0826 Pectobacterium atrosepticum SCRI1043 GNAT family acetyltransferase YP_048936.1 918246 D 218491 CDS YP_048937.1 50119770 2881925 complement(918802..919428) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri homoserine/homoserine lactone efflux protein RhtB or b3824 or c4746 or z5345 or ecs4754 or sf3902 SWALL:RHTB_ECOLI (SWALL:P27847) (206 aa) fasta scores: E(): 3.9e-19, 34.45% id in 209 aa, and to Shewanella oneidensis transporter, LysE family so0122 SWALL:AAN53209 (EMBL:AE015463) (207 aa) fasta scores: E(): 1.9e-30, 47.8% id in 205 aa. Also similar to ECA4170 (RhtB) (36.019% id. in 211 aa overlap); amino acid efflux protein 919428 2881925 ECA0827 Pectobacterium atrosepticum SCRI1043 amino acid efflux protein YP_048937.1 918802 R 218491 CDS YP_048938.1 50119771 2881926 complement(919625..920407) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 histidine-binding periplasmic protein precursor HisJ or b2309 or c2851 or z3571 or ecs3193 SWALL:HISJ_ECOLI (SWALL:P39182) (260 aa) fasta scores: E(): 8.9e-35, 38.22% id in 259 aa, and to Pseudomonas aeruginosa periplasmic histidine-binding protein HisJ or pa2923 SWALL:Q9HZS4 (EMBL:AE004718) (261 aa) fasta scores: E(): 2.8e-35, 40.15% id in 259 aa; amino acid-binding periplasmic protein 920407 2881926 ECA0828 Pectobacterium atrosepticum SCRI1043 amino acid-binding periplasmic protein YP_048938.1 919625 R 218491 CDS YP_048939.1 50119772 2881927 complement(920665..921243) 1 NC_004547.2 No significant database matches.; hypothetical protein 921243 2881927 ECA0829 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048939.1 920665 R 218491 CDS YP_048940.1 50119773 2881554 921448..921897 1 NC_004547.2 hypothetical protein 921897 2881554 ECA0830 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048940.1 921448 D 218491 CDS YP_048941.1 50119774 2881555 <921906..>922199 1 NC_004547.2 Partial CDS. Similar to the C-terminal region of Escherichia coli transposase insg for insertion sequence element IS4 InsG or b4278 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 1.7e-12, 50% id in 94 aa, and to Insertion sequence IS4 hypothetical 50.4 kDa protein SWALL:AAA61828 (EMBL:M10575) (442 aa) fasta scores: E(): 1.7e-12, 50% id in 94 aa; transposase (partial) >922199 2881555 ECA0831 Pectobacterium atrosepticum SCRI1043 transposase (partial) YP_048941.1 <921906 D 218491 CDS YP_048942.1 50119775 2881556 <922240..922566 1 NC_004547.2 Partial CDS. Similar to Salmonella typhi phage capsid protein sty4827 SWALL:Q8Z106 (EMBL:AL627283) (286 aa) fasta scores: E(): 0.0011, 35.41% id in 96 aa. No other significant database matches.; phage capsid protein (partial) 922566 2881556 ECA0832 Pectobacterium atrosepticum SCRI1043 phage capsid protein (partial) YP_048942.1 <922240 D 218491 CDS YP_048943.1 50119776 2881675 922585..922755 1 NC_004547.2 Similar to Bacteriophage 186 late control gene B protein B SWALL:VPB_BP186 (SWALL:P08711) (72 aa) fasta scores: E(): 1.9e-08, 48.98% id in 49 aa, and to Erwinia amylovora levansucrase regulator RlsB SWALL:Q8VNT8 (EMBL:AJ344351) (61 aa) fasta scores: E(): 2.2e-13, 64.7% id in 51 aa, and to Escherichia coli prophage P2 Ogr protein OgrK or b2082 SWALL:OGRK_ECOLI (SWALL:P37057) (72 aa) fasta scores: E(): 4.7e-08, 53.06% id in 49 aa. Also similar to ECA0414 (41.818% id. in 55 aa overlap), and to ECA3454 (46.000% id. in 50 aa overlap), and to ECA2599 (39.216% id. in 51 aa overlap).; phage regulatory protein 922755 2881675 ECA0833 Pectobacterium atrosepticum SCRI1043 phage regulatory protein YP_048943.1 922585 D 218491 CDS YP_048944.1 50119777 2881676 complement(923068..925512) 1 NC_004547.2 Similar to Pseudomonas syringae hypothetical protein pspto4607 SWALL:Q87WE4 (EMBL:AE016872) (819 aa) fasta scores: E(): 1.1e-96, 37.91% id in 807 aa; hypothetical protein 925512 2881676 ECA0834 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048944.1 923068 R 218491 CDS YP_048945.1 50119778 2881677 complement(925541..926821) 1 NC_004547.2 Similar to Escherichia coli prophage cp4-57 integrase IntA SWALL:INTA_ECOLI (SWALL:P32053) (413 aa) fasta scores: E(): 5.3e-93, 57.76% id in 393 aa, and to Yersinia pestis prophage cp4-57 integrase IntA SWALL:AAM86631 (EMBL:AE013909) (410 aa) fasta scores: E(): 5.3e-145, 92.17% id in 396 aa.; prophage integrase 926821 2881677 ECA0835 Pectobacterium atrosepticum SCRI1043 prophage integrase YP_048945.1 925541 R 218491 CDS YP_048946.1 50119779 2884376 complement(927358..927840) 1 NC_004547.2 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 927840 smpB 2884376 smpB Pectobacterium atrosepticum SCRI1043 SsrA-binding protein YP_048946.1 927358 R 218491 CDS YP_048947.1 50119780 2882130 927996..928442 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1102 SWALL:Q8ZH13 (EMBL:AJ414146) (144 aa) fasta scores: E(): 2.3e-47, 86.01% id in 143 aa, and to Escherichia coli, and Shigella flexneri hypothetical protein YfjG SWALL:AAN44173 (EMBL:D12501) (158 aa) fasta scores: E(): 3.3e-42, 76.55% id in 145 aa; hypothetical protein 928442 2882130 ECA0837 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048947.1 927996 D 218491 CDS YP_048948.2 161501880 2882131 928423..928713 1 NC_004547.2 Similar to Escherichia coli O6 protein YfjF SWALL:AAN81590 (EMBL:AE016764) (102 aa) fasta scores: E(): 1.8e-23, 75% id in 92 aa, and to Escherichia coli protein YfjF SWALL:YFJF_ECOLI (SWALL:P52119) (96 aa) fasta scores: E(): 4.4e-23, 75% id in 92 aa.; hypothetical protein 928713 2882131 ECA0838 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048948.2 928423 D 218491 CDS YP_048949.1 50119782 2884381 complement(928951..929286) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri small protein A precursor SmpA or b2617 or c3139 or sf2676 SWALL:SMPA_ECOLI (SWALL:P23089) (113 aa) fasta scores: E(): 1.3e-33, 80% id in 110 aa; hypothetical protein 929286 smpA 2884381 smpA Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048949.1 928951 R 218491 CDS YP_048950.1 50119783 2885106 complement(929441..931102) 1 NC_004547.2 Similar to Escherichia coli DNA repair protein RecN or RadB or b2616 SWALL:RECN_ECOLI (SWALL:P05824) (553 aa) fasta scores: E(): 2.6e-138, 73.41% id in 553 aa; recombination and repair protein 931102 recN 2885106 recN Pectobacterium atrosepticum SCRI1043 recombination and repair protein YP_048950.1 929441 R 218491 CDS YP_048951.1 50119784 2882729 complement(931182..932060) 1 NC_004547.2 catalyzes the phosphorylation of NAD to NADP; inorganic polyphosphate/ATP-NAD kinase 932060 ppnK 2882729 ppnK Pectobacterium atrosepticum SCRI1043 inorganic polyphosphate/ATP-NAD kinase YP_048951.1 931182 R 218491 CDS YP_048952.1 50119785 2884045 932209..932796 1 NC_004547.2 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 932796 grpE 2884045 grpE Pectobacterium atrosepticum SCRI1043 heat shock protein GrpE YP_048952.1 932209 D 218491 CDS YP_048953.1 50119786 2882946 933233..934465 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 manganese transport protein MntH or b2392 or c2931 or z3658 or ecs3271 SWALL:MNTH_ECOLI (SWALL:P77145) (412 aa) fasta scores: E(): 4.7e-123, 81.08% id in 407 aa.; manganese transport protein MntH 934465 mntH 2882946 mntH Pectobacterium atrosepticum SCRI1043 manganese transport protein MntH YP_048953.1 933233 D 218491 CDS YP_048954.1 50119787 2882132 complement(934497..934700) 1 NC_004547.2 Similar to Yersinia pestis tautomerase ypo3989 SWALL:Q8ZA31 (EMBL:AJ414160) (66 aa) fasta scores: E(): 2.5e-18, 81.81% id in 66 aa, and to Erwinia chrysanthemi hypothetical 8.1 kDa protein in kdgk 5'region SWALL:YKDK_ERWCH (SWALL:P45418) (73 aa) fasta scores: E(): 3.9e-17, 78.12% id in 64 aa; tautomerase 934700 2882132 ECA0844 Pectobacterium atrosepticum SCRI1043 tautomerase YP_048954.1 934497 R 218491 CDS YP_048955.1 50119788 2881311 complement(934714..935880) 1 NC_004547.2 Similar to Xylella fastidiosa hypothetical protein xf0268 SWALL:Q9PGN0 (EMBL:AE003880) (395 aa) fasta scores: E(): 2.5e-82, 61.69% id in 355 aa, and to Salmonella typhi membrane protein sty4872 SWALL:Q8Z0X3 (EMBL:AL627284) (394 aa) fasta scores: E(): 3.4e-79, 62.78% id in 352 aa, and to Escherichia coli hypothetical protein YjiJ SWALL:YJIJ_ECOLI (SWALL:P39381) (392 aa) fasta scores: E(): 3.8e-75, 58.23% id in 352 aa.; hypothetical protein 935880 2881311 ECA0845 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048955.1 934714 R 218491 CDS YP_048956.1 50119789 2882434 complement(936079..937176) 1 NC_004547.2 forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; glycerol dehydrogenase 937176 gldA 2882434 gldA Pectobacterium atrosepticum SCRI1043 glycerol dehydrogenase YP_048956.1 936079 R 218491 CDS YP_048957.1 50119790 2881312 937554..938135 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo3035 SWALL:Q8ZCF6 (EMBL:AJ414155) (198 aa) fasta scores: E(): 6.2e-48, 69.14% id in 188 aa, and to Escherichia coli hypothetical protein YffH SWALL:YFFH_ECOLI (SWALL:P37128) (191 aa) fasta scores: E(): 1.1e-46, 64.48% id in 183 aa; mutT/NUDIX family protein 938135 2881312 ECA0847 Pectobacterium atrosepticum SCRI1043 mutT/NUDIX family protein YP_048957.1 937554 D 218491 CDS YP_048958.1 50119791 2881313 938530..939795 1 NC_004547.2 Similar to Agrobacterium radiobacter lactose-binding protein precursor lacE SWALL:LACE_AGRRD (SWALL:P29822) (422 aa) fasta scores: E(): 6e-79, 49.4% id in 417 aa, and to Rhizobium meliloti probable lactose uptake ABC transporter periplasmic solute-binding protein lace or rb0001 or smb21652 SWALL:Q926I0 (EMBL:AL603642) (424 aa) fasta scores: E(): 1.1e-82, 50.97% id in 410 aa; sugar ABC transporter periplasmic-binding protein 939795 2881313 ECA0848 Pectobacterium atrosepticum SCRI1043 sugar ABC transporter periplasmic-binding protein YP_048958.1 938530 D 218491 CDS YP_048959.1 50119792 2881314 939859..940740 1 NC_004547.2 Similar to Agrobacterium radiobacter lactose transport system permease protein LacF SWALL:LACF_AGRRD (SWALL:P29823) (298 aa) fasta scores: E(): 1.2e-73, 62.54% id in 291 aa, and to Rhizobium meliloti probable lactose uptake ABC transporter permease protein LacF or rb0002 or smb21653 SWALL:Q92XF9 (EMBL:AL603642) (298 aa) fasta scores: E(): 2.1e-74, 65.27% id in 288 aa; sugar ABC transporter permease 940740 2881314 ECA0849 Pectobacterium atrosepticum SCRI1043 sugar ABC transporter permease YP_048959.1 939859 D 218491 CDS YP_048960.1 50119793 2881367 940742..941554 1 NC_004547.2 Similar to Agrobacterium radiobacter lactose transport system permease protein LacG SWALL:LACG_AGRRD (SWALL:P29824) (273 aa) fasta scores: E(): 6.5e-66, 57.46% id in 268 aa, and to Bacillus subtilis L-arabinose transport system permease protein AraQ SWALL:ARAQ_BACSU (SWALL:P94530) (281 aa) fasta scores: E(): 1e-30, 33.94% id in 271 aa; sugar ABC transporter permease 941554 2881367 ECA0850 Pectobacterium atrosepticum SCRI1043 sugar ABC transporter permease YP_048960.1 940742 D 218491 CDS YP_048961.1 50119794 2881368 941591..942676 1 NC_004547.2 Similar to Agrobacterium radiobacter lactose transport ATP-binding protein LacK SWALL:LACK_AGRRD (SWALL:Q01937) (363 aa) fasta scores: E(): 5.5e-66, 56.16% id in 365 aa, and to Yersinia pestis transport ATP-binding protein y3242 SWALL:AAM86792 (EMBL:AE013925) (368 aa) fasta scores: E(): 1.1e-77, 60.94% id in 361 aa; sugar ABC transporter ATP-binding protein 942676 2881368 ECA0851 Pectobacterium atrosepticum SCRI1043 sugar ABC transporter ATP-binding protein YP_048961.1 941591 D 218491 CDS YP_048962.1 50119795 2881369 943025..944548 1 NC_004547.2 Similar to Pseudomonas fluorescens arabinogalactan endo-1,4-beta-galactosidase precursor gala or ganA SWALL:GANA_PSEFL (SWALL:P48841) (376 aa) fasta scores: E(): 1.2e-16, 33.53% id in 325 aa, and to Thermotoga maritima arabinogalactan endo-1,4-beta-galactosidase, tm1201 SWALL:Q9X0S8 (EMBL:AE001777) (606 aa) fasta scores: E(): 1.6e-33, 36.2% id in 348 aa, and to Aspergillus aculeatus arabinogalactan endo-1,4-beta-galactosidase precursor gal1 SWALL:GANA_ASPAC (SWALL:P48842) (350 aa) fasta scores: E(): 2.2e-15, 30.69% id in 329 aa; exported plant proteoglycan hydrolase 944548 2881369 ECA0852 Pectobacterium atrosepticum SCRI1043 exported plant proteoglycan hydrolase YP_048962.1 943025 D 218491 CDS YP_048963.1 50119796 2882012 complement(944667..945698) 1 NC_004547.2 Similar to Escherichia coli ebg operon repressor EbgR or b3075 SWALL:EBGR_ECOLI (SWALL:P06846) (327 aa) fasta scores: E(): 3.5e-19, 32.71% id in 321 aa, and to Streptococcus thermophilus galactose operon repressor GalR SWALL:GALR_STRTR (SWALL:Q9ZB11) (331 aa) fasta scores: E(): 1.3e-12, 31.42% id in 350 aa; LacI family transcriptional regulator 945698 2882012 ECA0853 Pectobacterium atrosepticum SCRI1043 LacI family transcriptional regulator YP_048963.1 944667 R 218491 CDS YP_048964.1 50119797 2882013 complement(945835..946629) 1 NC_004547.2 Similar to Rhizobium sp. TAL1145 mimosine transporter ATP-binding protein MidC SWALL:Q9EYT0 (EMBL:AF312768) (265 aa) fasta scores: E(): 2.7e-49, 57.55% id in 245 aa, and to Corynebacterium glutamicum ABC-type transporter, ATPase component cgl1330 SWALL:Q8NQU4 (EMBL:AP005278) (250 aa) fasta scores: E(): 1.9e-50, 59.57% id in 235 aa; ABC transporter ATP-binding protein 946629 2882013 ECA0854 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_048964.1 945835 R 218491 CDS YP_048965.1 50119798 2882014 complement(946671..947612) 1 NC_004547.2 Similar to Rhizobium sp. TAL1145 mimosine transporter permease MidB SWALL:Q9EYT1 (EMBL:AF312768) (234 aa) fasta scores: E(): 6.8e-38, 52.52% id in 198 aa, and to Rhizobium meliloti ABC transporter, permease ra1186 or sma2197 SWALL:Q92XQ8 (EMBL:AE007304) (304 aa) fasta scores: E(): 1.8e-46, 46.2% id in 290 aa; ABC transporter permease 947612 2882014 ECA0855 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_048965.1 946671 R 218491 CDS YP_048966.1 50119799 2881598 complement(947609..948505) 1 NC_004547.2 Similar to Rhizobium sp. TAL1145 mimosine-binding periplasmic protein MidA SWALL:Q9EYT2 (EMBL:AF312768) (281 aa) fasta scores: E(): 1.8e-11, 28.07% id in 260 aa, and to Bifidobacterium longum probable solute binding protein of ABC transporter system bl1179 SWALL:AAN24984 (EMBL:AE014742) (354 aa) fasta scores: E(): 5.8e-23, 33.8% id in 281 aa; ABC transporter periplasmic-binding protein 948505 2881598 ECA0856 Pectobacterium atrosepticum SCRI1043 ABC transporter periplasmic-binding protein YP_048966.1 947609 R 218491 CDS YP_048967.1 50119800 2881599 complement(948918..949769) 1 NC_004547.2 Similar to Erwinia chrysanthemi beta-glucoside operon antiterminator ArbG SWALL:ARBG_ERWCH (SWALL:P26211) (283 aa) fasta scores: E(): 2.1e-35, 39.05% id in 274 aa, and to Bacillus subtilis transcription antiterminator LicT or n15A SWALL:LICT_BACSU (SWALL:P39805) (277 aa) fasta scores: E(): 4.1e-37, 38.98% id in 277 aa. Also similar to ECA1452 (37.500% id. in 250 aa overlap), and to ECA4389 (36.861% id. in 274 aa overlap), and to ECA1869, ArbG, (38.000% id. in 272 aa overlap); beta-glucoside operon antiterminator 949769 2881599 ECA0858 Pectobacterium atrosepticum SCRI1043 beta-glucoside operon antiterminator YP_048967.1 948918 R 218491 CDS YP_048968.1 50119801 2881600 complement(949915..951342) 1 NC_004547.2 Similar to Caldocellum saccharolyticum beta-glucosidase A bglA SWALL:BGLS_CALSA (SWALL:P10482) (455 aa) fasta scores: E(): 3.1e-50, 38.13% id in 472 aa, and to Clostridium acetobutylicum beta_glucosidase cap0010 SWALL:Q97TT6 (EMBL:AE001438) (469 aa) fasta scores: E(): 7.2e-116, 57.96% id in 471 aa, and to Escherichia coli 6-phospho-beta-glucosidase BglA or b2901 SWALL:BGLA_ECOLI (SWALL:Q46829) (479 aa) fasta scores: E(): 2.5e-53, 39.42% id in 487 aa; beta-glucosidase 951342 2881600 ECA0859 Pectobacterium atrosepticum SCRI1043 beta-glucosidase YP_048968.1 949915 R 218491 CDS YP_048969.1 50119802 2881601 complement(951408..953342) 1 NC_004547.2 Similar to Bacillus subtilis PTS system, beta-glucoside-specific IIabc component BglP or N17C SWALL:PTBA_BACSU (SWALL:P40739) (609 aa) fasta scores: E(): 1.1e-61, 39.06% id in 640 aa, and to Escherichia coli PTS system, arbutin-, cellobiose-, and salicin-specific IIabc component ascf or b2715 SWALL:PTDA_ECOLI (SWALL:P24241) (485 aa) fasta scores: E(): 6.6e-58, 38.55% id in 472 aa; PTS system transporter subunit IIABC 953342 2881601 ECA0860 Pectobacterium atrosepticum SCRI1043 PTS system transporter subunit IIABC YP_048969.1 951408 R 218491 CDS YP_048970.1 50119803 2884281 complement(953644..955638) 1 NC_004547.2 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 955638 tktA1 2884281 tktA1 Pectobacterium atrosepticum SCRI1043 transketolase YP_048970.1 953644 R 218491 CDS YP_048971.1 50119804 2884325 complement(955654..956604) 1 NC_004547.2 Maintains the balance of metabolites in the pentose-phosphate pathway; transaldolase A 956604 talA 2884325 talA Pectobacterium atrosepticum SCRI1043 transaldolase A YP_048971.1 955654 R 218491 CDS YP_048972.1 50119805 2885023 complement(956803..957261) 1 NC_004547.2 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 957261 rpiB 2885023 rpiB Pectobacterium atrosepticum SCRI1043 ribose-5-phosphate isomerase B YP_048972.1 956803 R 218491 CDS YP_048973.1 50119806 2881986 957605..957808 1 NC_004547.2 No significant database matches.; hypothetical protein 957808 2881986 ECA0864 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048973.1 957605 D 218491 CDS YP_048974.1 50119807 2881987 957805..959187 1 NC_004547.2 Similar to Streptomyces coelicolor transporter protein sco0581 SWALL:Q9RJQ9 (EMBL:AL939106) (455 aa) fasta scores: E(): 2.9e-116, 68.09% id in 442 aa, and to Yersinia pestis integral membrane protein ypo2237 SWALL:Q8ZED7 (EMBL:AJ414151) (436 aa) fasta scores: E(): 3.1e-61, 39.77% id in 435 aa; transporter 959187 2881987 ECA0865 Pectobacterium atrosepticum SCRI1043 transporter YP_048974.1 957805 D 218491 CDS YP_048975.1 50119808 2881390 959189..960961 1 NC_004547.2 in some organisms the DhaK and DhaL subunits are encoded by separate genes; in others they are fused; functions along with DhaM to phosphorylate dihydroxyacetone; dihydroxyacetone kinase 960961 2881390 ECA0866 Pectobacterium atrosepticum SCRI1043 dihydroxyacetone kinase YP_048975.1 959189 D 218491 CDS YP_048976.1 50119809 2884258 960958..961737 1 NC_004547.2 Similar to Lactobacillus delbrueckii triosephosphate isomerase TpiA or Tpi SWALL:TPIS_LACDE (SWALL:O32757) (252 aa) fasta scores: E(): 3.7e-20, 33.33% id in 255 aa, and to Streptomyces coelicolor triosephosphate isomerase sco0578 or scf55.02C SWALL:Q9RJR2 (EMBL:AL939106) (259 aa) fasta scores: E(): 1.1e-46, 55.46% id in 247 aa; triosephosphate isomerase 961737 tpiA 2884258 tpiA Pectobacterium atrosepticum SCRI1043 triosephosphate isomerase YP_048976.1 960958 D 218491 CDS YP_048977.1 50119810 2881391 961754..962581 1 NC_004547.2 Similar to Streptomyces coelicolor conserved hypothetical protein sco0577 SWALL:CAD55267 (EMBL:AL939106) (266 aa) fasta scores: E(): 2.9e-59, 56.87% id in 262 aa, and to Rhizobium meliloti hypothetical protein r01695 SWALL:Q92PP1 (EMBL:AL591788) (274 aa) fasta scores: E(): 1.9e-21, 29.68% id in 256 aa. Note that there are no significant database matches to enterobacterial species.; hypothetical protein 962581 2881391 ECA0868 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048977.1 961754 D 218491 CDS YP_048978.1 50119811 2881392 962609..963466 1 NC_004547.2 Similar to Streptomyces coelicolor oxidoreductase sco0576 or sc5g5.08C SWALL:Q93RZ4 (EMBL:AL939106) (291 aa) fasta scores: E(): 3e-65, 59.85% id in 284 aa, and to Rhizobium meliloti hypothetical protein rb0334 rb0334 or smb20348 SWALL:Q92WK5 (EMBL:AL603643) (275 aa) fasta scores: E(): 3.8e-35, 39.17% id in 268 aa. Note that there are no significant database matches to enterobacterial species.; hypothetical protein 963466 2881392 ECA0869 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048978.1 962609 D 218491 CDS YP_048979.1 50119812 2885154 963666..964628 1 NC_004547.2 Similar to Yersinia pestis transcriptional regulator y0843 SWALL:AAM84428 (EMBL:AE013687) (332 aa) fasta scores: E(): 8e-99, 83.12% id in 320 aa, and to Klebsiella pneumoniae sorbitol operon regulator SorC SWALL:SORC_KLEPN (SWALL:P37078) (315 aa) fasta scores: E(): 6.1e-16, 30.03% id in 313 aa.; transcriptional regulator 964628 2885154 ECA0870 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_048979.1 963666 D 218491 CDS YP_048980.1 50119813 2882231 964883..967162 1 NC_004547.2 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; malic enzyme 967162 maeB 2882231 maeB Pectobacterium atrosepticum SCRI1043 malic enzyme YP_048980.1 964883 D 218491 CDS YP_048981.1 50119814 2881746 967560..968834 1 NC_004547.2 tryptophan transporter of high affinity; tryptophan permease 968834 mtr 2881746 mtr Pectobacterium atrosepticum SCRI1043 tryptophan permease YP_048981.1 967560 D 218491 CDS YP_048982.1 50119815 2885155 complement(968913..969365) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3033 SWALL:YU33_YERPE (SWALL:Q8ZCF8) (152 aa) fasta scores: E(): 1.4e-47, 88.51% id in 148 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein YaiI SWALL:YAII_ECOLI (SWALL:P52088) (152 aa) fasta scores: E(): 1.2e-42, 78% id in 150 aa; hypothetical protein 969365 2885155 ECA0873 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048982.1 968913 R 218491 CDS YP_048983.1 50119816 2885670 complement(969369..970301) 1 NC_004547.2 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; coproporphyrinogen III oxidase 970301 hemF 2885670 hemF Pectobacterium atrosepticum SCRI1043 coproporphyrinogen III oxidase YP_048983.1 969369 R 218491 CDS YP_048984.1 50119817 2885156 970483..970908 1 NC_004547.2 Similar to Yersinia pestis acetyltransferase ypo3031 SWALL:Q8ZCG0 (EMBL:AJ414155) (141 aa) fasta scores: E(): 1.5e-48, 87.94% id in 141 aa, and to Salmonella typhi acetyltransferase sty2686 SWALL:Q8Z4V0 (EMBL:AL627274) (141 aa) fasta scores: E(): 1.1e-46, 82.27% id in 141 aa.; acetyltransferase 970908 2885156 ECA0875 Pectobacterium atrosepticum SCRI1043 acetyltransferase YP_048984.1 970483 D 218491 CDS YP_048985.1 50119818 2881579 complement(971015..973210) 1 NC_004547.2 Similar to Escherichia coli ferric aerobactin receptor precursor IutA SWALL:IUTA_ECOLI (SWALL:P14542) (732 aa) fasta scores: E(): 0, 75.85% id in 733 aa, and to Shigella boydii IutA SWALL:Q93PE2 (EMBL:AF335540) (732 aa) fasta scores: E(): 0, 75.44% id in 733 aa; TonB-dependent ferric aerobactin receptor 973210 iutA 2881579 iutA Pectobacterium atrosepticum SCRI1043 TonB-dependent ferric aerobactin receptor YP_048985.1 971015 R 218491 CDS YP_048986.1 50119819 2885157 973975..974826 1 NC_004547.2 Similar to Erwinia chrysanthemi TonB protein TonB SWALL:Q9REB0 (EMBL:Y15888) (252 aa) fasta scores: E(): 8.6e-09, 30.12% id in 239 aa, and to Escherichia coli TonB protein TonB or ExbA or b1252 SWALL:TONB_ECOLI (SWALL:P02929) (239 aa) fasta scores: E(): 4.7e-08, 33.21% id in 271 aa; TonB-like protein 974826 2885157 ECA0877 Pectobacterium atrosepticum SCRI1043 TonB-like protein YP_048986.1 973975 D 218491 CDS YP_048987.1 50119820 2885099 974924..977506 1 NC_004547.2 Similar to Escherichia coli hypothetical protein yddb or b1495 SWALL:YDDB_ECOLI (SWALL:P31827) (790 aa) fasta scores: E(): 6.7e-27, 28.16% id in 813 aa, and to Haemophilus influenzae hypothetical protein Hi1369 SWALL:YDDB_HAEIN (SWALL:P45182) (839 aa) fasta scores: E(): 6.1e-19, 24.43% id in 843 aa; hypothetical protein 977506 2885099 ECA0878 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048987.1 974924 D 218491 CDS YP_048988.1 50119821 2885100 977612..980386 1 NC_004547.2 Similar to Escherichia coli probable zinc protease PqqL or b1494 SWALL:PQQL_ECOLI (SWALL:P31828) (931 aa) fasta scores: E(): 1.1e-43, 25.42% id in 948 aa, and to Pasteurella multocida PqqL or pm0804 SWALL:Q9CML5 (EMBL:AE006119) (923 aa) fasta scores: E(): 1.9e-47, 23.52% id in 948 aa; zinc protease 980386 2885100 ECA0879 Pectobacterium atrosepticum SCRI1043 zinc protease YP_048988.1 977612 D 218491 CDS YP_048989.1 50119822 2885101 980392..982056 1 NC_004547.2 Similar to Pasteurella multocida hypothetical protein Pm0041 SWALL:Q9CPJ6 (EMBL:AE006038) (564 aa) fasta scores: E(): 7.9e-99, 48.01% id in 554 aa, and to Escherichia coli hypothetical ABC transporter ATP-binding protein YddA SWALL:YDDA_ECOLI (SWALL:P31826) (561 aa) fasta scores: E(): 5.7e-71, 38.24% id in 536 aa; ABC transporter ATP-binding protein 982056 2885101 ECA0880 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_048989.1 980392 D 218491 CDS YP_048990.1 50119823 2885792 982245..982844 1 NC_004547.2 Similar to Yersinia pestis lipoprotein ypo3026 SWALL:Q8ZCG5 (EMBL:AJ414155) (203 aa) fasta scores: E(): 3.1e-41, 57.92% id in 202 aa, and to Salmonella typhi lipoprotein sty2684 SWALL:Q8Z4V2 (EMBL:AL627274) (191 aa) fasta scores: E(): 3.8e-38, 56.31% id in 190 aa; hypothetical protein 982844 2885792 ECA0881 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048990.1 982245 D 218491 CDS YP_048991.1 50119824 2885793 983011..983910 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3025 SWALL:Q8ZCG6 (EMBL:AJ414155) (299 aa) fasta scores: E(): 1.3e-91, 75.25% id in 299 aa, and to Escherichia coli hypothetical protein YfeX SWALL:YFEX_ECOLI (SWALL:P76536) (299 aa) fasta scores: E(): 3.6e-79, 67.33% id in 300 aa.; hypothetical protein 983910 2885793 ECA0882 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_048991.1 983011 D 218491 CDS YP_048992.1 50119825 2882032 984193..985221 1 NC_004547.2 Similar to Escherichia coli thiosulfate-binding protein precursor CysP or b2425 SWALL:CYSP_ECOLI (SWALL:P16700) (338 aa) fasta scores: E(): 1e-102, 79.34% id in 334 aa; thiosulfate transporter subunit 985221 cysP 2882032 cysP Pectobacterium atrosepticum SCRI1043 thiosulfate transporter subunit YP_048992.1 984193 D 218491 CDS YP_048993.1 50119826 2881423 985221..986075 1 NC_004547.2 Similar to Escherichia coli sulfate transport system permease protein CysT SWALL:CYST_ECOLI (SWALL:P16701) (277 aa) fasta scores: E(): 2.9e-86, 80.95% id in 273 aa; sulfate/thiosulfate transporter subunit 986075 cysT 2881423 cysT Pectobacterium atrosepticum SCRI1043 sulfate/thiosulfate transporter subunit YP_048993.1 985221 D 218491 CDS YP_048994.1 50119827 2882624 986075..986968 1 NC_004547.2 Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import; sulfate/thiosulfate transporter permease subunit 986968 cysW 2882624 cysW Pectobacterium atrosepticum SCRI1043 sulfate/thiosulfate transporter permease subunit YP_048994.1 986075 D 218491 CDS YP_048995.1 50119828 2883910 987143..988024 1 NC_004547.2 catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; cysteine synthase B 988024 cysM 2883910 cysM Pectobacterium atrosepticum SCRI1043 cysteine synthase B YP_048995.1 987143 D 218491 CDS YP_048996.1 50119829 2882230 complement(988067..990019) 1 NC_004547.2 Similar to Escherichia coli macrolide-specific ABC-type efflux carrier MacB or b0879 SWALL:MACB_ECOLI (SWALL:P75831) (648 aa) fasta scores: E(): 7.4e-124, 55.71% id in 648 aa; macrolide-specific ABC-type efflux carrier 990019 macB 2882230 macB Pectobacterium atrosepticum SCRI1043 macrolide-specific ABC-type efflux carrier YP_048996.1 988067 R 218491 CDS YP_048997.1 50119830 2882229 complement(990023..991219) 1 NC_004547.2 Similar to Escherichia coli macrolide-specific efflux protein MacA precursor MacA or b0878 SWALL:MACA_ECOLI (SWALL:P75830) (371 aa) fasta scores: E(): 8.9e-30, 37.17% id in 390 aa, and to Yersinia pestis HlyD family secretion protein ypo2999 or y1481 SWALL:AAM85052 (EMBL:AJ414154) (401 aa) fasta scores: E(): 3.8e-78, 64.69% id in 405 aa; macrolide-specific efflux protein maca 991219 macA 2882229 macA Pectobacterium atrosepticum SCRI1043 macrolide-specific efflux protein maca YP_048997.1 990023 R 218491 CDS YP_048998.1 50119831 2885794 991470..992150 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri transcriptional regulatory protein CpxR or b3912 or z5457 or ecs4838 or sf3991 SWALL:CPXR_ECOLI (SWALL:P16244) (232 aa) fasta scores: E(): 3.5e-31, 44.93% id in 227 aa, and to Yersinia pestis two-component system response regulator ypo2998 or cpxr or y1482 SWALL:Q8ZCI9 (EMBL:AJ414154) (227 aa) fasta scores: E(): 1.3e-67, 77.97% id in 227 aa; two-component system response regulator 992150 2885794 ECA0889 Pectobacterium atrosepticum SCRI1043 two-component system response regulator YP_048998.1 991470 D 218491 CDS YP_048999.1 50119832 2884593 992153..993517 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 sensor protein CpxA or EcfB or Ssd or Eup or b3911 or c4863 or z5456 or ecs4837 SWALL:CPXA_ECOLI (SWALL:P08336) (457 aa) fasta scores: E(): 2.2e-23, 29.53% id in 474 aa, and to Yersinia pestis two-component system sensor kinase ypo2997 or y1483 SWALL:Q8ZCJ0 (EMBL:AJ414154) (449 aa) fasta scores: E(): 1e-91, 56.86% id in 459 aa; two-component system sensor kinase 993517 2884593 ECA0890 Pectobacterium atrosepticum SCRI1043 two-component system sensor kinase YP_048999.1 992153 D 218491 CDS YP_049000.1 50119833 2884939 complement(993584..994093) 1 NC_004547.2 functions in phosphoenolpyruvate-(PEP)-dependent phosphotransferase (PTS) system; functions in the transport and phosphorylation of glucose; PTS system glucose-specific transporter 994093 crr 2884939 crr Pectobacterium atrosepticum SCRI1043 PTS system glucose-specific transporter YP_049000.1 993584 R 218491 CDS YP_049001.1 50119834 2882072 complement(994243..995970) 1 NC_004547.2 Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system; phosphoenolpyruvate-protein phosphotransferase 995970 ptsI 2882072 ptsI Pectobacterium atrosepticum SCRI1043 phosphoenolpyruvate-protein phosphotransferase YP_049001.1 994243 R 218491 CDS YP_049002.1 50119835 2881865 complement(996016..996273) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, Salmonella typhimurium, Salmonella typhi, and Shigella flexneri phosphocarrier protein Hpr or b2415 or c2950 or z3681 or ecs3287 or stm2431 or sty2667 or t0426 or sf2470 SWALL:PTHP_ECOLI (SWALL:P07006) (85 aa) fasta scores: E(): 1e-27, 97.64% id in 85 aa; PTS system phosphohistidinoprotein-hexose phosphotransferase Hpr 996273 ptsH 2881865 ptsH Pectobacterium atrosepticum SCRI1043 PTS system phosphohistidinoprotein-hexose phosphotransferase Hpr YP_049002.1 996016 R 218491 CDS YP_049003.1 50119836 2883909 complement(996727..997695) 1 NC_004547.2 CysK; forms a complex with serine acetyltransferase CysE; functions in cysteine biosynthesis; cysteine synthase A 997695 cysK 2883909 cysK Pectobacterium atrosepticum SCRI1043 cysteine synthase A YP_049003.1 996727 R 218491 CDS YP_049004.1 50119837 2882625 complement(997858..998685) 1 NC_004547.2 role in sulfur assimilation; sulfate transport protein CysZ 998685 cysZ 2882625 cysZ Pectobacterium atrosepticum SCRI1043 sulfate transport protein CysZ YP_049004.1 997858 R 218491 CDS YP_049005.1 50119838 2882478 998911..999909 1 NC_004547.2 interacts with cell division protein FitsZ and may be required to anchor septal ring structure; cell division protein ZipA 999909 zipA 2882478 zipA Pectobacterium atrosepticum SCRI1043 cell division protein ZipA YP_049005.1 998911 D 218491 CDS YP_049006.1 50119839 2885588 1000038..1001291 1 NC_004547.2 uncharacterized member of the APC superfamily of amino acid transporters; unknown function; hypothetical protein 1001291 asoB 2885588 asoB Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049006.1 1000038 D 218491 CDS YP_049007.1 50119840 2884594 complement(1001365..1001658) 1 NC_004547.2 Similar to Salmonella typhimurium cytoplasmic protein stm3196 SWALL:Q8ZLY9 (EMBL:AE008847) (119 aa) fasta scores: E(): 1.4e-20, 75.75% id in 99 aa, and to Escherichia coli hypothetical protein yqiC SWALL:YQIC_ECOLI (SWALL:Q46868) (116 aa) fasta scores: E(): 2e-19, 77.66% id in 94 aa; hypothetical protein 1001658 2884594 ECA0898 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049007.1 1001365 R 218491 CDS YP_049008.1 50119841 2884782 1002298..1002951 1 NC_004547.2 DHBP synthase; functions during riboflavin biosynthesis; 3,4-dihydroxy-2-butanone 4-phosphate synthase 1002951 ribB 2884782 ribB Pectobacterium atrosepticum SCRI1043 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_049008.1 1002298 D 218491 CDS YP_049009.1 50119842 2884310 complement(1003036..1003896) 1 NC_004547.2 with TehA confers resistance to tellurite; tellurite resistance protein TehB 1003896 tehB 2884310 tehB Pectobacterium atrosepticum SCRI1043 tellurite resistance protein TehB YP_049009.1 1003036 R 218491 CDS YP_049010.1 50119843 2882047 complement(1004268..1005407) 1 NC_004547.2 catalyzes the reduction of the rubredoxin moiety of nitric oxide reductase; nitric oxide reductase 1005407 norW 2882047 norW Pectobacterium atrosepticum SCRI1043 nitric oxide reductase YP_049010.1 1004268 R 218491 CDS YP_049011.1 50119844 2881998 complement(1005415..1006944) 1 NC_004547.2 detoxifies nitric oxide using NADH; anaerobic nitric oxide reductase flavorubredoxin 1006944 norV 2881998 norV Pectobacterium atrosepticum SCRI1043 anaerobic nitric oxide reductase flavorubredoxin YP_049011.1 1005415 R 218491 CDS YP_049012.1 50119845 2881997 1007112..1008650 1 NC_004547.2 Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; anaerobic nitric oxide reductase transcriptional regulator 1008650 norR 2881997 norR Pectobacterium atrosepticum SCRI1043 anaerobic nitric oxide reductase transcriptional regulator YP_049012.1 1007112 D 218491 CDS YP_049013.1 50119846 2883458 complement(1008708..1010351) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 fumarate hydratase class I, aerobic FumA or b1612 or c2004 SWALL:FUMA_ECOLI (SWALL:P00923) (547 aa) fasta scores: E(): 3.1e-189, 85.13% id in 545 aa; class I fumarate hydratase 1010351 fumA 2883458 fumA Pectobacterium atrosepticum SCRI1043 class I fumarate hydratase YP_049013.1 1008708 R 218491 CDS YP_049014.1 50119847 2884595 complement(1010800..1011678) 1 NC_004547.2 Similar to Yersinia pestis LysR-family transcriptional regulatory protein ypo2979 SWALL:Q8ZCK5 (EMBL:AJ414154) (292 aa) fasta scores: E(): 1.7e-70, 64.08% id in 284 aa, and to Salmonella typhi possible regulatory protein sty3165 SWALL:Q8Z3Z7 (EMBL:AL627277) (287 aa) fasta scores: E(): 3.8e-56, 55.35% id in 280 aa.; LysR family transcriptional regulator 1011678 2884595 ECA0905 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_049014.1 1010800 R 218491 CDS YP_049015.1 50119848 2884555 1011943..1012413 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo2978 SWALL:AAM85075 (EMBL:AJ414154) (175 aa) fasta scores: E(): 3.9e-37, 60.66% id in 150 aa, and to Salmonella typhimurium, and Salmonella typhi inner membrane protein stm3021 or sty3166 SWALL:Q8XG43 (EMBL:AE008839) (160 aa) fasta scores: E(): 2.2e-33, 60% id in 145 aa.; hypothetical protein 1012413 2884555 ECA0906 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049015.1 1011943 D 218491 CDS YP_049016.1 50119849 2884556 complement(1012423..1013085) 1 NC_004547.2 Similar to Schizosaccharomyces pombe DNA-3-methyladenine glycosylase 1 Mag1 or spapb24d3.04C SWALL:MAG1_SCHPO (SWALL:Q92383) (228 aa) fasta scores: E(): 3.5e-33, 43.75% id in 208 aa, and to Pseudomonas putida DNA-3-methyladenine glycosylase pp0705 SWALL:AAN66330 (EMBL:AE016776) (208 aa) fasta scores: E(): 1.7e-39, 51.98% id in 202 aa; DNA-3-methyladenine glycosylase 1013085 2884556 ECA0907 Pectobacterium atrosepticum SCRI1043 DNA-3-methyladenine glycosylase YP_049016.1 1012423 R 218491 CDS YP_049017.1 50119850 2883938 1013309..1014424 1 NC_004547.2 Similar to Escherichia coli Ada regulatory protein SWALL:ADA_ECOLI (SWALL:P06134) (354 aa) fasta scores: E(): 2.3e-70, 53.95% id in 341 aa; methylated-DNA--protein-cysteine methyltransferase 1014424 ada 2883938 ada Pectobacterium atrosepticum SCRI1043 methylated-DNA--protein-cysteine methyltransferase YP_049017.1 1013309 D 218491 CDS YP_049018.1 50119851 2884194 1014421..1015077 1 NC_004547.2 Similar to Escherichia coli alkylated DNA repair protein AlkB or AidD or b2212 SWALL:ALKB_ECOLI (SWALL:P05050) (216 aa) fasta scores: E(): 6e-49, 56.94% id in 216 aa; alkylated DNA repair protein 1015077 alkB 2884194 alkB Pectobacterium atrosepticum SCRI1043 alkylated DNA repair protein YP_049018.1 1014421 D 218491 CDS YP_049019.1 50119852 2884557 complement(1015307..1016836) 1 NC_004547.2 Similar to Shewanella frigidimarina fumarate reductase flavoprotein subunit precursor FccA or Fcc3 SWALL:FRDA_SHEFR (SWALL:Q02469) (596 aa) fasta scores: E(): 1e-20, 27.82% id in 496 aa, and to Shewanella oneidensis fumarate reductase flavoprotein subunit precursor so0970 SWALL:FRDA_SHEON (SWALL:P83223) (596 aa) fasta scores: E(): 1.7e-17, 29.27% id in 485 aa, and to Rhodococcus erythropolis 3-ketosteroid 1-dehydrogenase KstD2 SWALL:Q8RLT5 (EMBL:AY078169) (565 aa) fasta scores: E(): 5e-10, 28.73% id in 341 aa; flavoprotein subunit of a reductase 1016836 2884557 ECA0910 Pectobacterium atrosepticum SCRI1043 flavoprotein subunit of a reductase YP_049019.1 1015307 R 218491 CDS YP_049020.1 50119853 2884565 complement(1016948..1017295) 1 NC_004547.2 Similar to Fusobacterium nucleatum hypothetical protein Fn0656 SWALL:Q8RFN5 (EMBL:AE010576) (126 aa) fasta scores: E(): 0.065, 32.14% id in 112 aa, and to Methanosarcina acetivorans na+-transporting NADH:ubiquinone oxidoreductase, subunit 3 Nqr3 or ma0661 SWALL:Q8TSY2 (EMBL:AE010727) (188 aa) fasta scores: E(): 5.6, 31.64% id in 79 aa; hypothetical protein 1017295 2884565 ECA0911 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049020.1 1016948 R 218491 CDS YP_049021.1 50119854 2884566 complement(1017353..1018729) 1 NC_004547.2 Similar to Yersinia pestis membrane transport protein ypo0009 SWALL:Q8ZJS7 (EMBL:AJ414141) (474 aa) fasta scores: E(): 7.2e-49, 33.76% id in 459 aa, and to Escherichia coli hypothetical transport protein YieO SWALL:YIEO_ECOLI (SWALL:P31474) (475 aa) fasta scores: E(): 6.1e-48, 32.59% id in 451 aa.; hypothetical protein 1018729 2884566 ECA0912 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049021.1 1017353 R 218491 CDS YP_049022.1 50119855 2884567 complement(1018730..1019692) 1 NC_004547.2 Similar to Escherichia coli NfrD protein NrfD or b4073 SWALL:NRFD_ECOLI (SWALL:P32709) (318 aa) fasta scores: E(): 1.4e-56, 50.62% id in 322 aa. Also similar to ECA1878 (50.784% id. in 319 aa overlap); component of polysulfide reductase 1019692 2884567 ECA0913 Pectobacterium atrosepticum SCRI1043 component of polysulfide reductase YP_049022.1 1018730 R 218491 CDS YP_049023.1 50119856 2884568 complement(1019685..1020383) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri NrfC protein precursor nrfc or b4072 or z5671 or ecs5054 or sf4132 SWALL:NRFC_ECOLI (SWALL:P32708) (223 aa) fasta scores: E(): 7.3e-49, 58.66% id in 225 aa. Also similar to ECA1877 (56.444% id. in 225 aa overlap); component of polysulfide reductase 1020383 2884568 ECA0914 Pectobacterium atrosepticum SCRI1043 component of polysulfide reductase YP_049023.1 1019685 R 218491 CDS YP_049024.1 50119857 2883920 complement(1020917..1021882) 1 NC_004547.2 Similar to Zymomonas mobilis hypothetical protein SWALL:AAL36115 (EMBL:AY057845) (361 aa) fasta scores: E(): 2.7e-40, 41.21% id in 313 aa, and to Rhodococcus sp heroin esterase Her SWALL:O06441 (EMBL:U70619) (322 aa) fasta scores: E(): 1.1e-07, 36.92% id in 130 aa, and to Pyrobaculum calidifontis esterase pc-Est SWALL:Q8NKS0 (EMBL:AB078331) (313 aa) fasta scores: E(): 1.2e-07, 26.64% id in 274 aa, and to Acetobacter pasteurianus arylesterase Est1 SWALL:O66374 (EMBL:AB012140) (317 aa) fasta scores: E(): 5.9e-06, 26.96% id in 293 aa; hypothetical protein 1021882 2883920 ECA0915 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049024.1 1020917 R 218491 CDS YP_049025.1 50119858 2883921 1022284..1023183 1 NC_004547.2 Similar to Listeria innocua transcription activator of glutamate synthase operon GltC SWALL:Q92AS3 (EMBL:AL596170) (295 aa) fasta scores: E(): 8.3e-15, 25.25% id in 293 aa, and to Acinetobacter calcoaceticus ben and cat operon transcriptional regulator BenM SWALL:BENM_ACICA (SWALL:O68014) (304 aa) fasta scores: E(): 1.3e-11, 25% id in 272 aa; LysR family transcriptional regulator 1023183 2883921 ECA0916 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_049025.1 1022284 D 218491 CDS YP_049026.1 50119859 2884451 1023335..1024570 1 NC_004547.2 Similar to Escherichia coli starvation sensing protein RspA SWALL:RSPA_ECOLI (SWALL:P38104) (404 aa) fasta scores: E(): 5.7e-163, 92.57% id in 404 aa. Also similar to ECA0189 (36.070% id. in 402 aa overlap); starvation sensing mandelate racemase / muconate lactonizing protein 1024570 rspA 2884451 rspA Pectobacterium atrosepticum SCRI1043 starvation sensing mandelate racemase / muconate lactonizing protein YP_049026.1 1023335 D 218491 CDS YP_049027.1 50119860 2884446 1024600..1025622 1 NC_004547.2 Similar to Escherichia coli starvation sensing protein RspB or b1580 SWALL:RSPB_ECOLI (SWALL:P38105) (339 aa) fasta scores: E(): 5.6e-94, 73.45% id in 339 aa; dehydrogenase 1025622 rspB 2884446 rspB Pectobacterium atrosepticum SCRI1043 dehydrogenase YP_049027.1 1024600 D 218491 CDS YP_049028.1 50119861 2883922 1026017..1027390 1 NC_004547.2 Similar to Salmonella typhi membrane transport protein sty1554 SWALL:Q8Z6Z5 (EMBL:AL627270) (459 aa) fasta scores: E(): 4e-141, 81.69% id in 448 aa, and to Escherichia coli hypothetical metabolite transport protein YdfJ SWALL:YDFJ_ECOLI (SWALL:P77228) (427 aa) fasta scores: E(): 1.1e-67, 80.09% id in 422 aa; transporter 1027390 2883922 ECA0919 Pectobacterium atrosepticum SCRI1043 transporter YP_049028.1 1026017 D 218491 CDS YP_049029.1 50119862 2883843 1027493..1028959 1 NC_004547.2 Similar to Escherichia coli D-mannonate oxidoreductase UxuB or b4323 SWALL:UXUB_ECOLI (SWALL:P39160) (486 aa) fasta scores: E(): 1.5e-102, 54.83% id in 476 aa, and to Escherichia coli hypothetical oxidoreductase ydfi or b1542 SWALL:YDFI_ECOLI (SWALL:P77260) (486 aa) fasta scores: E(): 1.2e-127, 65.26% id in 475 aa. Also similar to ECA0819 (UxuB) (54.906% id. in 479 aa overlap); carbohydrate oxidoreductase 1028959 2883843 ECA0920 Pectobacterium atrosepticum SCRI1043 carbohydrate oxidoreductase YP_049029.1 1027493 D 218491 CDS YP_049030.1 50119863 2883844 1029050..1029736 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical transcriptional regulator YdfH SWALL:YDFH_ECOLI (SWALL:P77577) (228 aa) fasta scores: E(): 2e-51, 60.88% id in 225 aa, and to Salmonella typhimurium, and Salmonella typhi regulatory protein, GntR-family stm1510 or sty1551 SWALL:Q8XFZ6 (EMBL:AE008766) (228 aa) fasta scores: E(): 2.3e-50, 60% id in 225 aa; GntR family transcriptional regulator 1029736 2883844 ECA0921 Pectobacterium atrosepticum SCRI1043 GntR family transcriptional regulator YP_049030.1 1029050 D 218491 CDS YP_049031.1 50119864 2883845 complement(1029897..1030829) 1 NC_004547.2 Similar to Pseudomonas syringae transcriptional regulator, LusR family pspto1618 SWALL:Q886G1 (EMBL:AE016861) (302 aa) fasta scores: E(): 2e-62, 53.53% id in 297 aa, and to Yersinia pestis transcriptional regulator mlr2579 SWALL:Q93AB4 (EMBL:AF426171) (303 aa) fasta scores: E(): 3.7e-44, 44.33% id in 300 aa; LysR family transcriptional regulator 1030829 2883845 ECA0922 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_049031.1 1029897 R 218491 CDS YP_049032.1 50119865 2883729 1030959..1031849 1 NC_004547.2 Similar to Synechocystis sp. hypothetical protein slr0317 SWALL:Q55924 (EMBL:D64005) (287 aa) fasta scores: E(): 3.1e-18, 31.95% id in 291 aa, and to Rhizobium loti hypothetical protein mll1871 SWALL:Q98JM9 (EMBL:AP002998) (293 aa) fasta scores: E(): 2.1e-17, 29.49% id in 295 aa, and to Escherichia coli hypothetical protein YtfG SWALL:YTFG_ECOLI (SWALL:P39315) (286 aa) fasta scores: E(): 1.9e-12, 29.23% id in 236 aa.; hypothetical protein 1031849 2883729 ECA0923 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049032.1 1030959 D 218491 CDS YP_049033.1 50119866 2883730 complement(1031988..1033349) 1 NC_004547.2 Similar to Shigella flexneri 2a hypothetical 49.1 kDa protein SWALL:Q93F16 (EMBL:AF326777) (452 aa) fasta scores: E(): 1e-107, 62.25% id in 453 aa.; hypothetical protein 1033349 2883730 ECA0924 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049033.1 1031988 R 218491 CDS YP_049034.1 50119867 2883731 complement(1033383..1034717) 1 NC_004547.2 Similar to Mus musculus schwannoma-associated protein pld3 or sam9 SWALL:O35405 (EMBL:AF026124) (488 aa) fasta scores: E(): 6e-08, 29.31% id in 382 aa, and to Dictyostelium discoideum hypothetical protein SWALL:Q23849 (EMBL:M19469) (372 aa) fasta scores: E(): 5.7e-12, 28.72% id in 376 aa, and to Cowpox virus v043 SWALL:Q8QN20 (EMBL:AF482758) (424 aa) fasta scores: E(): 4e-08, 27.79% id in 367 aa; phospholipase 1034717 2883731 ECA0925 Pectobacterium atrosepticum SCRI1043 phospholipase YP_049034.1 1033383 R 218491 CDS YP_049035.1 50119868 2883586 complement(1034710..1035378) 1 NC_004547.2 Similar to Plesiomonas shigelloides ExbB SWALL:Q93SS5 (EMBL:AY008342) (269 aa) fasta scores: E(): 5.9e-08, 40.49% id in 121 aa, and to Vibrio vulnificus biopolymer transport protein vv21613 SWALL:AAO08472 (EMBL:AE016813) (230 aa) fasta scores: E(): 9.2e-07, 27.75% id in 209 aa; biopolymer transport protein 1035378 2883586 ECA0926 Pectobacterium atrosepticum SCRI1043 biopolymer transport protein YP_049035.1 1034710 R 218491 CDS YP_049036.1 50119869 2883587 complement(1035647..1037887) 1 NC_004547.2 Similar to Escherichia coli probable TonB-dependent receptor yncd precursor yncd or b1451 SWALL:YNCD_ECOLI (SWALL:P76115) (700 aa) fasta scores: E(): 9e-12, 22.77% id in 751 aa, and to Caulobacter crescentus TonB-dependent receptor cc3436 SWALL:Q9A2X0 (EMBL:AE006003) (800 aa) fasta scores: E(): 4.1e-16, 25.64% id in 772 aa; TonB-dependent receptor 1037887 2883587 ECA0927 Pectobacterium atrosepticum SCRI1043 TonB-dependent receptor YP_049036.1 1035647 R 218491 CDS YP_049037.1 50119870 2883588 complement(1037965..1038714) 1 NC_004547.2 Similar to Salmonella typhimurium TonB protein SWALL:TONB_SALTY (SWALL:P25945) (242 aa) fasta scores: E(): 6.8e-09, 35.93% id in 192 aa, and to Escherichia coli TonB protein SWALL:TONB_ECOLI (SWALL:P02929) (239 aa) fasta scores: E(): 6.5e-07, 37.91% id in 182 aa.; TonB-like protein 1038714 2883588 ECA0928 Pectobacterium atrosepticum SCRI1043 TonB-like protein YP_049037.1 1037965 R 218491 CDS YP_049038.1 50119871 2883568 complement(1038716..1039117) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri biopolymer transport ExbD protein or b3005 or c3740 or z4358 or ecs3889 or sf3050 SWALL:EXBD_ECOLI (SWALL:P18784) (141 aa) fasta scores: E(): 6.4e-07, 29.85% id in 134 aa, and to Anabaena sp. hypothetical protein All5046 all5046 SWALL:Q8YM90 (EMBL:AP003598) (134 aa) fasta scores: E(): 1.2e-08, 33.58% id in 134 aa; biopolymer transport protein 1039117 2883568 ECA0929 Pectobacterium atrosepticum SCRI1043 biopolymer transport protein YP_049038.1 1038716 R 218491 CDS YP_049039.1 50119872 2883569 complement(1039456..1040649) 1 NC_004547.2 Similar to Salmonella typhimurium permease stm0382 SWALL:Q8ZRF1 (EMBL:AE008713) (403 aa) fasta scores: E(): 4.6e-107, 71.89% id in 395 aa, and to Escherichia coli hypothetical transport protein ycee ycee or b1053 SWALL:YCEE_ECOLI (SWALL:P25744) (408 aa) fasta scores: E(): 2.2e-89, 60.61% id in 391 aa; permease 1040649 2883569 ECA0930 Pectobacterium atrosepticum SCRI1043 permease YP_049039.1 1039456 R 218491 CDS YP_049040.1 50119873 2883570 complement(1041218..1043086) 1 NC_004547.2 Similar to Xanthomonas campestris xanthomonas compestris avirulence protein precursor SWALL:Q56794 (EMBL:M99059) (617 aa) fasta scores: E(): 3.9e-141, 57.42% id in 613 aa, and to Pectobacterium carotovorum subsp. atrosepticum avirulence protein AvrxcA SWALL:Q9RB04 (EMBL:AJ274642) (97 aa) fasta scores: E(): 1.4e-29, 100% id in 90 aa; avirulence protein 1043086 2883570 ECA0931 Pectobacterium atrosepticum SCRI1043 avirulence protein YP_049040.1 1041218 R 218491 CDS YP_049041.1 50119874 2883571 complement(1043321..1044637) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 cytosine permease CodB or b0336 or c0455 SWALL:CODB_ECOLI (SWALL:P25525) (419 aa) fasta scores: E(): 5.8e-25, 28.73% id in 428 aa, and to Streptomyces coelicolor cytosine permease sco0572 or sc5g5.04C SWALL:Q93RZ8 (EMBL:AL939106) (466 aa) fasta scores: E(): 2.4e-55, 40.19% id in 413 aa; permease 1044637 2883571 ECA0932 Pectobacterium atrosepticum SCRI1043 permease YP_049041.1 1043321 R 218491 CDS YP_049042.1 50119875 2883156 complement(1044652..1045341) 1 NC_004547.2 Similar to Photorhabdus luminescens Orf66 SWALL:AAO17220 (EMBL:AF346500) (227 aa) fasta scores: E(): 8.7e-29, 36.01% id in 211 aa, and to Vibrio cholerae transcriptional regulator, LuxR family vca1078 SWALL:Q9KKM5 (EMBL:AE004433) (319 aa) fasta scores: E(): 1.7e-06, 26.63% id in 214 aa; LuxR family transcriptional regulator 1045341 2883156 ECA0933 Pectobacterium atrosepticum SCRI1043 LuxR family transcriptional regulator YP_049042.1 1044652 R 218491 CDS YP_049043.1 50119876 2883157 complement(1045371..1045784) 1 NC_004547.2 Similar to Erwinia amylovora orf 12 SWALL:Q46650 (EMBL:L25828) (139 aa) fasta scores: E(): 5.3e-17, 43.7% id in 135 aa, and to Enterobacter aerogenes acetyltransferase Act SWALL:CAD48860 (EMBL:AJ508047) (138 aa) fasta scores: E(): 9.8e-17, 41.91% id in 136 aa, and to Salmonella typhimurium acetyltransferase stm1857 SWALL:Q8ZNY6 (EMBL:AE008782) (139 aa) fasta scores: E(): 4.4e-13, 40.28% id in 139 aa; acetyltransferase 1045784 2883157 ECA0934 Pectobacterium atrosepticum SCRI1043 acetyltransferase YP_049043.1 1045371 R 218491 CDS YP_049044.1 50119877 2882278 1046527..1048740 1 NC_004547.2 Similar to Escherichia coli FhuE receptor precursor FhuE or b1102 SWALL:FHUE_ECOLI (SWALL:P16869) (729 aa) fasta scores: E(): 1.9e-162, 55.86% id in 725 aa; ferric-rhodotorulic acid outer membrane transporter 1048740 fhuE 2882278 fhuE Pectobacterium atrosepticum SCRI1043 ferric-rhodotorulic acid outer membrane transporter YP_049044.1 1046527 D 218491 CDS YP_049045.1 50119878 2883158 complement(1048833..1050182) 1 NC_004547.2 Similar to Escherichia coli glucarate dehydratase related protein GudX or b2788 SWALL:GUDX_ECOLI (SWALL:Q46915) (446 aa) fasta scores: E(): 1.4e-101, 55.7% id in 447 aa; glucarate dehydratase 1050182 2883158 ECA0936 Pectobacterium atrosepticum SCRI1043 glucarate dehydratase YP_049045.1 1048833 R 218491 CDS YP_049046.1 50119879 2883070 complement(1050175..1051521) 1 NC_004547.2 Similar to Pseudomonas putida major facilitator family transporter pp4758 SWALL:AAN70328 (EMBL:AE016791) (455 aa) fasta scores: E(): 2.5e-78, 48.75% id in 441 aa, and to Agrobacterium vitis tartrate transporter ttuB SWALL:TUB4_AGRVI (SWALL:Q44470) (433 aa) fasta scores: E(): 3.3e-58, 39.57% id in 427 aa; transporter 1051521 2883070 ECA0937 Pectobacterium atrosepticum SCRI1043 transporter YP_049046.1 1050175 R 218491 CDS YP_049047.1 50119880 2883071 1051812..1052303 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi inner membrane protein ydgk or stm1458 or stm1460 or sty1662 SWALL:Q8XEX0 (EMBL:AE008763) (146 aa) fasta scores: E(): 0.56, 21.67% id in 143 aa.; hypothetical protein 1052303 2883071 ECA0938 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049047.1 1051812 D 218491 CDS YP_049048.1 50119881 2883072 complement(1052370..1052939) 1 NC_004547.2 Similar to Xenorhabdus nematophilus fimbrial major subunit MrxA SWALL:Q8KRT4 (EMBL:AF525420) (179 aa) fasta scores: E(): 9.2e-13, 35% id in 180 aa, and to Salmonella typhimurium fimbrial subunit BcfA or stm0021 SWALL:Q9X604 (EMBL:AF130422) (180 aa) fasta scores: E(): 7.3e-10, 30.68% id in 176 aa, and to Escherichia coli PapA SWALL:Q9AM11 (EMBL:AF332519) (159 aa) fasta scores: E(): 6.2e-08, 27.77% id in 162 aa, and to Escherichia coli adhesion protein PapA SWALL:Q9KHX0 (EMBL:AF247355) (171 aa) fasta scores: E(): 4.8e-07, 26.66% id in 150 aa; fimbrial protein 1052939 2883072 ECA0939 Pectobacterium atrosepticum SCRI1043 fimbrial protein YP_049048.1 1052370 R 218491 CDS YP_049049.1 50119882 2882996 complement(1052967..1054001) 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c3794 SWALL:AAN82238 (EMBL:AE016766) (349 aa) fasta scores: E(): 8.4e-14, 27.55% id in 352 aa; hypothetical protein 1054001 2882996 ECA0940 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049049.1 1052967 R 218491 CDS YP_049050.1 50119883 2882997 complement(1054020..1054769) 1 NC_004547.2 Similar to Proteus mirabilis chaperone protein PmfD SWALL:PMFD_PROMI (SWALL:P53520) (254 aa) fasta scores: E(): 8.9e-43, 46.72% id in 229 aa, and to Escherichia coli sfpd SWALL:Q933Y4 (EMBL:AJ131667) (243 aa) fasta scores: E(): 8e-41, 44.93% id in 247 aa, and to Escherichia coli chaperone protein PapD SWALL:PAPD_ECOLI (SWALL:P15319) (239 aa) fasta scores: E(): 2e-36, 42.98% id in 228 aa, and to Escherichia coli PrfD SWALL:CAD42028 (EMBL:AJ494981) (239 aa) fasta scores: E(): 2e-36, 42.98% id in 228 aa.; fimbrial chaperone 1054769 2882997 ECA0941 Pectobacterium atrosepticum SCRI1043 fimbrial chaperone YP_049050.1 1054020 R 218491 CDS YP_049051.1 50119884 2882998 complement(1054808..1057300) 1 NC_004547.2 Similar to Photorhabdus luminescens MrfC SWALL:Q93MT4 (EMBL:AF396083) (851 aa) fasta scores: E(): 6.4e-137, 43.95% id in 810 aa, and to Proteus mirabilis outer membrane usher protein PmfC precursor pmfC SWALL:PMFC_PROMI (SWALL:P53514) (828 aa) fasta scores: E(): 3e-132, 42.75% id in 807 aa, and to Escherichia coli outer membrane usher protein PapC SWALL:PAPC_ECOLI (SWALL:P07110) (836 aa) fasta scores: E(): 1.6e-126, 43.34% id in 849 aa; outer membrane usher protein 1057300 2882998 ECA0942 Pectobacterium atrosepticum SCRI1043 outer membrane usher protein YP_049051.1 1054808 R 218491 CDS YP_049052.1 50119885 2882983 complement(1057442..1057990) 1 NC_004547.2 Similar to Escherichia coli f15 P-fimbriae major subunit precursor FfiA SWALL:P71218 (EMBL:Y08929) (168 aa) fasta scores: E(): 2.8e-17, 38.5% id in 174 aa, and to Serratia marcescens fimbria A protein precursor SmfA SWALL:FMA_SERMA (SWALL:P13421) (174 aa) fasta scores: E(): 1.3e-16, 39.34% id in 183 aa.; fimbriae major subunit protein 1057990 2882983 ECA0943 Pectobacterium atrosepticum SCRI1043 fimbriae major subunit protein YP_049052.1 1057442 R 218491 CDS YP_049053.1 50119886 2882984 1058636..1059439 1 NC_004547.2 Similar to Shigella flexneri orf, partial conserved hypothetical protein sf3508 SWALL:AAN44966 (EMBL:AE015359) (254 aa) fasta scores: E(): 2.7e-06, 31.38% id in 137 aa; hypothetical protein 1059439 2882984 ECA0944 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049053.1 1058636 D 218491 CDS YP_049054.1 50119887 2882985 1059426..1059896 1 NC_004547.2 Similar to Salmonella typhi exported protein FidL or sty4029 SWALL:Q8Z2J0 (EMBL:AL627280) (154 aa) fasta scores: E(): 0.0034, 28.31% id in 113 aa.; hypothetical protein 1059896 2882985 ECA0945 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049054.1 1059426 D 218491 CDS YP_049055.1 50119888 2885597 complement(1059958..1060530) 1 NC_004547.2 Similar to Streptomyces coelicolor transcriptional regulator sco5528 SWALL:O86510 (EMBL:AL939124) (200 aa) fasta scores: E(): 1.3e-08, 28.02% id in 182 aa, and to Streptomyces coelicolor TetR-family transcriptional regulator sco6299 SWALL:CAD55507 (EMBL:AL939127) (285 aa) fasta scores: E(): 0.00075, 23.6% id in 161 aa; TetR family transcriptional regulator 1060530 2885597 ECA0946 Pectobacterium atrosepticum SCRI1043 TetR family transcriptional regulator YP_049055.1 1059958 R 218491 CDS YP_049056.1 50119889 2885598 1060623..1061516 1 NC_004547.2 Similar to Pasteurella multocida hypothetical protein pm0404 SWALL:Q9CNM3 (EMBL:AE006076) (287 aa) fasta scores: E(): 4.7e-57, 54.31% id in 278 aa, and to Neisseria meningitidis integral membrane protein nma1777 SWALL:Q9JTH3 (EMBL:AL162757) (287 aa) fasta scores: E(): 3.8e-55, 52.43% id in 267 aa; hypothetical protein 1061516 2885598 ECA0947 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049056.1 1060623 D 218491 CDS YP_049057.1 50119890 2885599 complement(1061622..1062176) 1 NC_004547.2 Similar to Salmonella typhi exported protein sty4152 or t3869 SWALL:Q8Z2B0 (EMBL:AL627281) (179 aa) fasta scores: E(): 3.3e-45, 68.78% id in 173 aa, and to Yersinia pestis exported protein ypo1003 or y3395 SWALL:AAM86945 (EMBL:AJ414145) (195 aa) fasta scores: E(): 6e-43, 68.86% id in 167 aa; hypothetical protein 1062176 2885599 ECA0948 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049057.1 1061622 R 218491 CDS YP_049058.1 50119891 2885600 complement(1062410..1063174) 1 NC_004547.2 Similar to Xanthomonas axonopodis hypothetical protein xac4298 SWALL:Q8PEP7 (EMBL:AE012083) (259 aa) fasta scores: E(): 3.4e-42, 45.2% id in 250 aa, and to Pseudomonas putida conserved hypothetical protein pp3933 SWALL:AAN69527 (EMBL:AE016788) (253 aa) fasta scores: E(): 3.7e-39, 42.57% id in 249 aa; hypothetical protein 1063174 2885600 ECA0949 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049058.1 1062410 R 218491 CDS YP_049059.1 50119892 2885644 complement(1063490..1064089) 1 NC_004547.2 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa1226 SWALL:Q9I4B2 (EMBL:AE004552) (202 aa) fasta scores: E(): 1.3e-38, 56.54% id in 191 aa, and to Rhizobium meliloti transcriptional regulator ra0119 SWALL:Q930S6 (EMBL:AE007206) (204 aa) fasta scores: E(): 9.3e-36, 52.88% id in 191 aa.; TetR family transcriptional regulator 1064089 2885644 ECA0950 Pectobacterium atrosepticum SCRI1043 TetR family transcriptional regulator YP_049059.1 1063490 R 218491 CDS YP_049060.1 50119893 2885645 1064207..1064794 1 NC_004547.2 Similar to Xanthomonas axonopodis NAD(P)H oxidoreductase xac2229 SWALL:Q8PKE6 (EMBL:AE011860) (198 aa) fasta scores: E(): 1.5e-38, 53.88% id in 193 aa, and to Pseudomonas aeruginosa probable NAD(P)H oxidoreductase pa1225 SWALL:Q9I4B3 (EMBL:AE004552) (208 aa) fasta scores: E(): 1.9e-36, 53.6% id in 194 aa; NAD(P)H oxidoreductase 1064794 2885645 ECA0951 Pectobacterium atrosepticum SCRI1043 NAD(P)H oxidoreductase YP_049060.1 1064207 D 218491 CDS YP_049061.1 50119894 2885646 1064820..1064996 1 NC_004547.2 no significant database matches; hypothetical protein 1064996 2885646 ECA0952 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049061.1 1064820 D 218491 CDS YP_049062.1 50119895 2882917 1065060..1065287 1 NC_004547.2 no significant database matches; hypothetical protein 1065287 2882917 ECA0953 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049062.1 1065060 D 218491 CDS YP_049063.1 50119896 2882918 complement(1065851..1066357) 1 NC_004547.2 Similar to Pseudomonas syringae acetyltransferase Ttr SWALL:TTR_PSESZ (SWALL:P16966) (177 aa) fasta scores: E(): 1.5e-15, 38.56% id in 153 aa, and to Streptomyces coelicolor acetyltransferase sco6803 or sc1a2.12 SWALL:Q9L229 (EMBL:AL939129) (181 aa) fasta scores: E(): 8.6e-21, 46.75% id in 154 aa; acetyltransferase 1066357 2882918 ECA0954 Pectobacterium atrosepticum SCRI1043 acetyltransferase YP_049063.1 1065851 R 218491 CDS YP_049064.1 50119897 2882919 complement(1066555..1067454) 1 NC_004547.2 Similar to Xanthobacter flavus rubisco operon transcriptional regulator CbbR or CfxO SWALL:CBBR_XANFL (SWALL:P25545) (333 aa) fasta scores: E(): 8.9e-19, 30.3% id in 297 aa, and to Agrobacterium tumefaciens transcriptional regulator, LysR family OxyR or atu0873 or agr_c_1597 SWALL:Q8UH12 (EMBL:AE009053) (316 aa) fasta scores: E(): 5.3e-39, 43.88% id in 278 aa; LysR family transcriptional regulator 1067454 2882919 ECA0955 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_049064.1 1066555 R 218491 CDS YP_049065.1 50119898 2882859 1067553..1068080 1 NC_004547.2 Similar to Salmonella typhimurium YceA protein SWALL:Q8L251 (EMBL:AP005147) (178 aa) fasta scores: E(): 5.6e-45, 60.81% id in 171 aa, and to Agrobacterium tumefaciens acetyltransferase atu0874 or agr_c_1598 SWALL:Q8UH11 (EMBL:AE009053) (206 aa) fasta scores: E(): 1.4e-34, 50.87% id in 171 aa; acetyltransferase 1068080 2882859 ECA0956 Pectobacterium atrosepticum SCRI1043 acetyltransferase YP_049065.1 1067553 D 218491 CDS YP_049066.1 50119899 2882860 1068077..1069264 1 NC_004547.2 Similar to Bradyrhizobium japonicum MFS permease bll5460 SWALL:BAC50725 (EMBL:AP005955) (416 aa) fasta scores: E(): 2.7e-31, 31.23% id in 397 aa, and to Agrobacterium tumefaciens MFS permease atu0960 or agr_c_1756 SWALL:Q8UGS5 (EMBL:AE009060) (427 aa) fasta scores: E(): 9e-27, 31.8% id in 393 aa; hypothetical protein 1069264 2882860 ECA0957 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049066.1 1068077 D 218491 CDS YP_049067.1 50119900 2882861 1069781..1070074 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty4517 SWALL:Q8Z1M5 (EMBL:AL627282) (97 aa) fasta scores: E(): 3.4e-31, 89.69% id in 97 aa, and to Xanthomonas campestris hypothetical protein Xcc3104 SWALL:Q8P668 (EMBL:AE012426) (96 aa) fasta scores: E(): 2.5e-23, 72.63% id in 95 aa; hypothetical protein 1070074 2882861 ECA0958 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049067.1 1069781 D 218491 CDS YP_049068.1 50119901 2882351 1070142..1070561 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty4668 SWALL:Q8Z1C2 (EMBL:AL627283) (162 aa) fasta scores: E(): 2.2e-45, 89.05% id in 137 aa, and to Salmonella typhimurium acetyltransferase stm4318 SWALL:Q8ZKC6 (EMBL:AE008902) (163 aa) fasta scores: E(): 2.7e-43, 84.28% id in 140 aa; acetyltransferase 1070561 2882351 ECA0959 Pectobacterium atrosepticum SCRI1043 acetyltransferase YP_049068.1 1070142 D 218491 CDS YP_049069.1 50119902 2882352 1070915..1073521 1 NC_004547.2 Similar to Pseudomonas putida hypothetical protein Pp3692 SWALL:AAN69289 (EMBL:AE016787) (891 aa) fasta scores: E(): 2.6e-122, 40.84% id in 857 aa, and weakly similar to Campylobacter jejuni RloG SWALL:Q8RJJ2 (EMBL:AF486547) (797 aa) fasta scores: E(): 0.034, 20.58% id in 850 aa, and to Campylobacter jejuni RloE SWALL:Q8RN16 (EMBL:AF486555) (800 aa) fasta scores: E(): 0.12, 21.43% id in 849 aa; restriction enzyme 1073521 2882352 ECA0960 Pectobacterium atrosepticum SCRI1043 restriction enzyme YP_049069.1 1070915 D 218491 CDS YP_049070.1 50119903 2882034 complement(1073966..1074184) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 ccda protein CcdA or LetA or protein H SWALL:CCDA_ECOLI (SWALL:P05702) (72 aa) fasta scores: E(): 5.2e-11, 50% id in 72 aa, and to Salmonella typhimurium toxin addiction system: antidote ccda or pslt027 SWALL:Q93GR6 (EMBL:AE006471) (72 aa) fasta scores: E(): 1e-10, 48.61% id in 72 aa; plasmid maintenance protein CcdA 1074184 ccdA2 2882034 ccdA2 Pectobacterium atrosepticum SCRI1043 plasmid maintenance protein CcdA YP_049070.1 1073966 R 218491 CDS YP_049071.1 50119904 2882353 complement(1074199..1074447) 1 NC_004547.2 Similar to Rhizobium loti hypothetical protein Msr0960 SWALL:Q98LM9 (EMBL:AP002996) (83 aa) fasta scores: E(): 2.2e-07, 43.47% id in 69 aa, and to Leptospira interrogans predicted transcriptional regulator la0511 SWALL:AAN47710 (EMBL:AE011237) (98 aa) fasta scores: E(): 1.5e-05, 45.9% id in 61 aa; regulatory protein 1074447 2882353 ECA0964 Pectobacterium atrosepticum SCRI1043 regulatory protein YP_049071.1 1074199 R 218491 CDS YP_049072.1 50119905 2885446 complement(1074532..1074786) 1 NC_004547.2 Similar to Leptospira interrogans predicted transcriptional regulator la2845 SWALL:AAN50044 (EMBL:AE011449) (98 aa) fasta scores: E(): 6.8e-06, 50.82% id in 61 aa, and to Rhizobium loti hypothetical protein Msr0960 msr0960 SWALL:Q98LM9 (EMBL:AP002996) (83 aa) fasta scores: E(): 2.9e-07, 45.45% id in 66 aa; regulatory protein 1074786 2885446 ECA0965 Pectobacterium atrosepticum SCRI1043 regulatory protein YP_049072.1 1074532 R 218491 CDS YP_049073.1 50119906 2885447 1074890..1075132 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri sugar fermentation stimulation protein B SfsB or Nlp or Sfs7 or b3188 or c3946 or z4551 or ecs4067 or sf3228 SWALL:SFSB_ECOLI (SWALL:P18837) (92 aa) fasta scores: E(): 4.3e-16, 75% id in 64 aa, and to Salmonella typhi transcriptional regulatory protein CII or sty4673 SWALL:Q8Z1B7 (EMBL:AL627283) (73 aa) fasta scores: E(): 3e-19, 79.41% id in 68 aa. Also similar to ECA0513 (91.139% id. in 79 aa overlap), and to ECA3206 (85.714% id. in 70 aa overlap), and to ECA0686 (72.368% id. in 76 aa overlap.); transcriptional regulator 1075132 2885447 ECA0966 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_049073.1 1074890 D 218491 CDS YP_049074.1 50119907 2884372 1076168..1078321 1 NC_004547.2 Similar to Escherichia coli ornithine decarboxylase, constitutive SpeC or b2965 SWALL:DCOR_ECOLI (SWALL:P21169) (711 aa) fasta scores: E(): 0, 71.78% id in 716 aa, and to Yersinia pestis ornithine decarboxylase SpeC or ypo0960 or y3347 SWALL:Q8ZHE0 (EMBL:AJ414145) (720 aa) fasta scores: E(): 0, 73.61% id in 720 aa; ornithine decarboxylase 1078321 speC 2884372 speC Pectobacterium atrosepticum SCRI1043 ornithine decarboxylase YP_049074.1 1076168 D 218491 CDS YP_049075.1 50119908 2885448 complement(1078381..1079040) 1 NC_004547.2 Similar to Streptomyces coelicolor sc10a5.34c protein sco5929 or sc10a5.34C SWALL:O54125 (EMBL:AL939125) (258 aa) fasta scores: E(): 1.7e-24, 38.86% id in 211 aa, and to Halobacterium volcanii oxidoreductase SWALL:O34187 (EMBL:U95375) (255 aa) fasta scores: E(): 4e-08, 28.43% id in 211 aa; short chain dehydrogenase 1079040 2885448 ECA0968 Pectobacterium atrosepticum SCRI1043 short chain dehydrogenase YP_049075.1 1078381 R 218491 CDS YP_049076.1 50119909 2885449 complement(1079199..1079828) 1 NC_004547.2 Similar to Yersinia pestis tetr-family regulatory protein ypo3840 or y0390 SWALL:AAM83979 (EMBL:AJ414159) (228 aa) fasta scores: E(): 1.4e-33, 71.36% id in 213 aa, and to Rhizobium loti transcriptional regulator mll3386 SWALL:Q98GC7 (EMBL:AP003001) (219 aa) fasta scores: E(): 3.2e-30, 48.66% id in 187 aa; TetR family transcriptional regulator 1079828 2885449 ECA0969 Pectobacterium atrosepticum SCRI1043 TetR family transcriptional regulator YP_049076.1 1079199 R 218491 CDS YP_049077.1 50119910 2881699 1080117..1081325 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3839 or y0391 SWALL:Q8ZAG3 (EMBL:AJ414159) (405 aa) fasta scores: E(): 1.9e-113, 73.98% id in 396 aa, and to Rhizobium sp. hypothetical protein Y4oU precursor SWALL:Y4OU_RHISN (SWALL:P55606) (402 aa) fasta scores: E(): 2.3e-83, 54.61% id in 401 aa; hypothetical protein 1081325 2881699 ECA0970 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049077.1 1080117 D 218491 CDS YP_049078.1 50119911 2881700 1081339..1082172 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3838 or y0392 SWALL:AAM83981 (EMBL:AJ414159) (280 aa) fasta scores: E(): 1.4e-93, 88.4% id in 276 aa, and to Rhizobium meliloti hypothetical protein ra0728 or sma1332 SWALL:Q92YY4 (EMBL:AE007260) (280 aa) fasta scores: E(): 9.5e-72, 70.07% id in 274 aa; hypothetical protein 1082172 2881700 ECA0971 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049078.1 1081339 D 218491 CDS YP_049079.1 50119912 2881701 1082387..1083430 1 NC_004547.2 Similar to Agrobacterium tumefaciens hypothetical protein atu2436 or agr_c_4418 SWALL:Q8UCP7 (EMBL:AE009191) (348 aa) fasta scores: E(): 3e-52, 43.37% id in 332 aa, and to Caulobacter crescentus hypothetical protein Cc3039 SWALL:Q9A405 (EMBL:AE005966) (335 aa) fasta scores: E(): 5.4e-20, 29.27% id in 345 aa; hypothetical protein 1083430 2881701 ECA0972 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049079.1 1082387 D 218491 CDS YP_049080.1 50119913 2881265 complement(1083393..1084556) 1 NC_004547.2 Similar to Agrobacterium tumefaciens transcriptional regulator, AraC family atu0248 or agr_c_425 SWALL:Q8UIP5 (EMBL:AE008997) (365 aa) fasta scores: E(): 3.7e-23, 33.14% id in 353 aa, and to Vibrio cholerae transcriptional regulator, arac/xyls family vca0926 SWALL:Q9KL23 (EMBL:AE004420) (365 aa) fasta scores: E(): 3.5e-16, 33.69% id in 368 aa; AraC family transcriptional regulator 1084556 2881265 ECA0973 Pectobacterium atrosepticum SCRI1043 AraC family transcriptional regulator YP_049080.1 1083393 R 218491 CDS YP_049081.1 50119914 2885531 complement(1084560..1085633) 1 NC_004547.2 Murein hydrolase C; membrane-bound; lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase C 1085633 mltC 2885531 mltC Pectobacterium atrosepticum SCRI1043 murein transglycosylase C YP_049081.1 1084560 R 218491 CDS YP_049082.1 50119915 2881266 complement(1085686..1085958) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri protein yggx or b2962 or z4307 or ecs3838 or sf2959 SWALL:AAN44440 (EMBL:U28377) (91 aa) fasta scores: E(): 1e-29, 87.35% id in 87 aa, and to Salmonella typhimurium, and Salmonella typhi cytoplasmic protein yggx or stm3111 or sty3266 SWALL:Q8XFV6 (EMBL:AE008843) (91 aa) fasta scores: E(): 2.9e-30, 88.5% id in 87 aa; hypothetical protein 1085958 2881266 ECA0975 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049082.1 1085686 R 218491 CDS YP_049083.1 50119916 2885295 complement(1085955..1087061) 1 NC_004547.2 Similar to Escherichia coli A/G-specific adenine glycosylase MutY or MicA or b2961 SWALL:MUTY_ECOLI (SWALL:P17802) (350 aa) fasta scores: E(): 3.8e-114, 75.64% id in 349 aa, and to Yersinia pestis adenine glycosylase MutY or y3339 SWALL:AAM86889 (EMBL:AE013935) (415 aa) fasta scores: E(): 1.4e-124, 81.42% id in 350 aa; adenine DNA glycosylase 1087061 mutY 2885295 mutY Pectobacterium atrosepticum SCRI1043 adenine DNA glycosylase YP_049083.1 1085955 R 218491 CDS YP_049084.1 50119917 2881267 1087227..1087946 1 NC_004547.2 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 1087946 trmB 2881267 trmB Pectobacterium atrosepticum SCRI1043 tRNA (guanine-N(7)-)-methyltransferase YP_049084.1 1087227 D 218491 CDS YP_049085.1 50119918 2881922 1087948..1088292 1 NC_004547.2 Similar to Escherichia coli hypothetical protein yggl or b2959 SWALL:YGGL_ECOLI (SWALL:P38521) (108 aa) fasta scores: E(): 4e-30, 66.66% id in 108 aa, and to Shigella flexneri orf, conserved hypothetical protein yggl or sf2956 SWALL:AAN44437 (EMBL:AE015308) (118 aa) fasta scores: E(): 5e-30, 66.66% id in 108 aa; hypothetical protein 1088292 2881922 ECA0978 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049085.1 1087948 D 218491 CDS YP_049086.1 50119919 2881923 1088407..1089120 1 NC_004547.2 Similar to Salmonella typhimurium periplasmic protein yggn or stm3107 SWALL:Q8ZM42 (EMBL:AE008842) (239 aa) fasta scores: E(): 1.6e-48, 59.41% id in 239 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein yggn or b2958 or c3544 or z4303 or ecs3834 SWALL:YGGN_ECOLI (SWALL:P46143) (239 aa) fasta scores: E(): 1.8e-48, 58.99% id in 239 aa; hypothetical protein 1089120 2881923 ECA0979 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049086.1 1088407 D 218491 CDS YP_049087.1 50119920 2881924 1089351..1092461 1 NC_004547.2 Similar to Pseudomonas fluorescens serine protease homologue PspB SWALL:Q9ZNI5 (EMBL:AB015053) (1036 aa) fasta scores: E(): 1.6e-25, 28.66% id in 1106 aa, and to Serratia marcescens extracellular serine protease precursor SWALL:PRTT_SERMA (SWALL:P29805) (1045 aa) fasta scores: E(): 1.1e-16, 25.6% id in 1082 aa; autotransporter 1092461 2881924 ECA0980 Pectobacterium atrosepticum SCRI1043 autotransporter YP_049087.1 1089351 D 218491 CDS YP_049088.1 50119921 2884320 complement(1092513..1093574) 1 NC_004547.2 complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain; member of the aldo/keto reductase 2 family; crystal structure of purified Escherichia coli protein shows bound NADPH; aldo-keto reductase 1093574 tas 2884320 tas Pectobacterium atrosepticum SCRI1043 aldo-keto reductase YP_049088.1 1092513 R 218491 CDS YP_049089.1 50119922 2882148 complement(1093781..1093990) 1 NC_004547.2 Similar to Salmonella typhimurium Pot family, peptide transport protein ygdr or stm3007 SWALL:Q8ZMA7 (EMBL:AE008838) (72 aa) fasta scores: E(): 5.8e-14, 61.11% id in 72 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical lipoprotein ygdr precursor ygdr or b2833 or c3428 or z4151 or ecs3690 or sf2843 SWALL:AAN81873 (EMBL:U29581) (72 aa) fasta scores: E(): 3.6e-13, 59.72% id in 72 aa; lipoprotein 1093990 2882148 ECA0982 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_049089.1 1093781 R 218491 CDS YP_049090.1 50119923 2882149 complement(1094161..1094877) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi integral membrane transport protein ygdq or stm3006 or sty3149 SWALL:Q8XES3 (EMBL:AE008838) (237 aa) fasta scores: E(): 2.2e-73, 80.34% id in 234 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein ygdq ygdq or b2832 or c3427 or z4150 or ecs3689 SWALL:YGDQ_ECOLI (SWALL:Q46931) (237 aa) fasta scores: E(): 6.5e-73, 79.48% id in 234 aa; hypothetical protein 1094877 2882149 ECA0983 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049090.1 1094161 R 218491 CDS YP_049091.1 50119924 2882086 complement(1095149..1095844) 1 NC_004547.2 MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; DNA mismatch repair protein 1095844 mutH 2882086 mutH Pectobacterium atrosepticum SCRI1043 DNA mismatch repair protein YP_049091.1 1095149 R 218491 CDS YP_049092.1 50119925 2884620 1096541..1097074 1 NC_004547.2 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 1097074 nudH 2884620 nudH Pectobacterium atrosepticum SCRI1043 dinucleoside polyphosphate hydrolase YP_049092.1 1096541 D 218491 CDS YP_049093.1 50119926 2881460 1097087..1099333 1 NC_004547.2 member of a second PTS chain involved in nitrogen metabolism; PtsP phosphorylates NPr; fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain 1099333 ptsP 2881460 ptsP Pectobacterium atrosepticum SCRI1043 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain YP_049093.1 1097087 D 218491 CDS YP_049094.1 50119927 2883335 1099537..1100406 1 NC_004547.2 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 1100406 lgt 2883335 lgt Pectobacterium atrosepticum SCRI1043 prolipoprotein diacylglyceryl transferase YP_049094.1 1099537 D 218491 CDS YP_049095.1 50119928 2884284 1100443..1101237 1 NC_004547.2 ThyA; catalyzes formation of dTMP and 7,8-dihydrofolate from 5,10-methylenetetrahydrofolate and dUMP; involved in deoxyribonucleotide biosynthesis; there are 2 copies in some Bacilli, one of which appears to be phage-derived; thymidylate synthase 1101237 thyA 2884284 thyA Pectobacterium atrosepticum SCRI1043 thymidylate synthase YP_049095.1 1100443 D 218491 CDS YP_049096.1 50119929 2885576 1101411..1101914 1 NC_004547.2 Similar to Escherichia coli prepilin peptidase dependent protein A precursor PpdA or b2826 SWALL:PPDA_ECOLI (SWALL:P33554) (156 aa) fasta scores: E(): 5.2e-19, 40% id in 150 aa, and to Salmonella typhimurium prepilin peptidase dependent protein a, component in type IVpilin biogenesis ppda or stm3000 SWALL:Q8ZMB0 (EMBL:AE008837) (156 aa) fasta scores: E(): 2.7e-20, 39.35% id in 155 aa; hypothetical protein 1101914 ppdA 2885576 ppdA Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049096.1 1101411 D 218491 CDS YP_049097.1 50119930 2882894 1101908..1102519 1 NC_004547.2 Similar to Escherichia coli prepilin peptidase dependent protein b precursor PpdB or b2825 SWALL:PPDB_ECOLI (SWALL:P08371) (187 aa) fasta scores: E(): 3.4e-15, 27.12% id in 188 aa, and to Yersinia pestis prepilin peptidase dependent protein ypo1015 or y3169 SWALL:Q8ZH93 (EMBL:AJ414146) (202 aa) fasta scores: E(): 6.3e-33, 51.61% id in 186 aa; hypothetical protein 1102519 ppdB 2882894 ppdB Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049097.1 1101908 D 218491 CDS YP_049098.1 50119931 2882150 1102516..1102971 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo1016 or y3168 SWALL:Q8ZH92 (EMBL:AJ414146) (156 aa) fasta scores: E(): 2.3e-18, 43.33% id in 150 aa, and to Salmonella typhi hypothetical protein Sty3136 SWALL:Q8Z415 (EMBL:AL627277) (135 aa) fasta scores: E(): 0.00037, 34.24% id in 146 aa; hypothetical protein 1102971 2882150 ECA0991 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049098.1 1102516 D 218491 CDS YP_049099.1 50119932 2882895 1102955..1103353 1 NC_004547.2 Similar to Escherichia coli prepilin peptidase dependent protein C precursor PpdC or b2823 SWALL:PPDC_ECOLI (SWALL:P08372) (107 aa) fasta scores: E(): 2.9, 24.32% id in 111 aa, and to Escherichia coli probable general secretion pathway protein i precursor GspI or b3330 SWALL:GSPI_ECOLI (SWALL:P45760) (125 aa) fasta scores: E(): 2.5, 22.4% id in 125 aa; prepilin peptidase dependent protein c 1103353 ppdC 2882895 ppdC Pectobacterium atrosepticum SCRI1043 prepilin peptidase dependent protein c YP_049099.1 1102955 D 218491 CDS YP_049100.1 50119933 2885059 1103446..1106844 1 NC_004547.2 catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides; component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination; exonuclease V subunit gamma 1106844 recC 2885059 recC Pectobacterium atrosepticum SCRI1043 exonuclease V subunit gamma YP_049100.1 1103446 D 218491 CDS YP_049101.1 50119934 2881868 1106941..1109889 1 NC_004547.2 Similar to Escherichia coli protease III precursor PtrA or Ptr or b2821 SWALL:PTRA_ECOLI (SWALL:P05458) (962 aa) fasta scores: E(): 0, 63.68% id in 950 aa, and to Yersinia pestis protease III ptra or ypo1019 or ptr or y3165 SWALL:Q8ZH89 (EMBL:AJ414146) (962 aa) fasta scores: E(): 0, 68.02% id in 960 aa; protease III 1109889 ptrA 2881868 ptrA Pectobacterium atrosepticum SCRI1043 protease III YP_049101.1 1106941 D 218491 CDS YP_049102.1 50119935 2885058 1109886..1113512 1 NC_004547.2 helicase/nuclease; with RecCD catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; exonuclease V subunit beta 1113512 recB 2885058 recB Pectobacterium atrosepticum SCRI1043 exonuclease V subunit beta YP_049102.1 1109886 D 218491 CDS YP_049103.1 50119936 2885291 1113509..1115371 1 NC_004547.2 helicase/nuclease; with RecBC catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; exonuclease V subunit alpha 1115371 recD 2885291 recD Pectobacterium atrosepticum SCRI1043 exonuclease V subunit alpha YP_049103.1 1113509 D 218491 CDS YP_049104.1 50119937 2881591 complement(1115454..1116476) 1 NC_004547.2 Similar to Salmonella typhi lacI family transcriptional regulator regulator sty4100 SWALL:Q8Z2E7 (EMBL:AL627280) (351 aa) fasta scores: E(): 1.2e-83, 68.69% id in 329 aa, and to Salmonella typhimurium transcriptional regulator stm3696 SWALL:Q8ZL59 (EMBL:AE008871) (334 aa) fasta scores: E(): 1.8e-83, 67.35% id in 340 aa; LacI family transcriptional regulator 1116476 2881591 ECA0997 Pectobacterium atrosepticum SCRI1043 LacI family transcriptional regulator YP_049104.1 1115454 R 218491 CDS YP_049105.1 50119938 2881592 1116801..1117997 1 NC_004547.2 Similar to Salmonella typhimurium mandelate racemase / muconate lactonizing enzyme family stm3697 SWALL:Q8ZL58 (EMBL:AE008872) (398 aa) fasta scores: E(): 9.9e-148, 92.96% id in 398 aa, and to Pseudomonas putida mandelate racemase mdlA SWALL:MANR_PSEPU (SWALL:P11444) (359 aa) fasta scores: E(): 1.3e-22, 28.32% id in 353 aa; mandelate racemase 1117997 2881592 ECA0998 Pectobacterium atrosepticum SCRI1043 mandelate racemase YP_049105.1 1116801 D 218491 CDS YP_049106.1 50119939 2884143 complement(1118062..1119387) 1 NC_004547.2 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; N-acetylglutamate synthase 1119387 argA 2884143 argA Pectobacterium atrosepticum SCRI1043 N-acetylglutamate synthase YP_049106.1 1118062 R 218491 CDS YP_049107.1 50119940 2884191 1119665..1120909 1 NC_004547.2 Similar to Escherichia coli O6 N-acetylmuramoyl-L-alanine amidase amic precursor AmiC or b2817 or c3411 SWALL:AMIC_ECOLI (SWALL:Q46929) (417 aa) fasta scores: E(): 2.2e-113, 72.46% id in 414 aa, and to Yersinia pestis N-acetylmuramoyl-L-alanine amidase amic ypo1023 SWALL:Q8ZH85 (EMBL:AJ414146) (416 aa) fasta scores: E(): 1.3e-120, 77.31% id in 410 aa; N-acetylmuramoyl-L-alanine amidase 1120909 amiC 2884191 amiC Pectobacterium atrosepticum SCRI1043 N-acetylmuramoyl-L-alanine amidase YP_049107.1 1119665 D 218491 CDS YP_049108.1 50119941 2885614 1121679..1122809 1 NC_004547.2 membrane-bound, lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; murein transglycosylase A 1122809 mltA 2885614 mltA Pectobacterium atrosepticum SCRI1043 murein transglycosylase A YP_049108.1 1121679 D 218491 CDS YP_049109.1 50119942 2881593 complement(1122906..1123823) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri dihydrodipicolinate synthase DapA or b2478 or sf2521 SWALL:DAPA_ECOLI (SWALL:P05640) (292 aa) fasta scores: E(): 2.8e-20, 30.45% id in 289 aa, and to Ralstonia solanacearum dihydrodipicolinate synthase dapa or rsc1145 or rs04756 SWALL:DAPA_RALSO (SWALL:Q8Y099) (294 aa) fasta scores: E(): 2.5e-26, 30.71% id in 280 aa; dihydrodipicolinate synthase 1123823 2881593 ECA1002 Pectobacterium atrosepticum SCRI1043 dihydrodipicolinate synthase YP_049109.1 1122906 R 218491 CDS YP_049110.1 50119943 2881594 complement(1123897..1124589) 1 NC_004547.2 Similar to Burkholderia cepacia transcription factor SWALL:Q93L29 (EMBL:AF029344) (246 aa) fasta scores: E(): 1.6e-16, 29.14% id in 223 aa, and to Ralstonia solanacearum transcription regulator protein rsc0538 or rs04928 SWALL:Q8Y1Z9 (EMBL:AL646059) (340 aa) fasta scores: E(): 6.6e-16, 37.01% id in 208 aa; TetR family transcription factor 1124589 2881594 ECA1003 Pectobacterium atrosepticum SCRI1043 TetR family transcription factor YP_049110.1 1123897 R 218491 CDS YP_049111.1 50119944 2881602 complement(1124593..1125945) 1 NC_004547.2 Similar to Campylobacter jejuni hippurate hydrolase HipO or cj0985C SWALL:HIPO_CAMJE (SWALL:P45493) (383 aa) fasta scores: E(): 1.9e-48, 40.41% id in 386 aa, and to Rhizobium meliloti amidohydrolase, similar to hippurate hydrolase protein rb0783 or smb21279 SWALL:Q92VC5 (EMBL:AL603644) (389 aa) fasta scores: E(): 1.9e-65, 49.48% id in 386 aa; hydrolase 1125945 2881602 ECA1004 Pectobacterium atrosepticum SCRI1043 hydrolase YP_049111.1 1124593 R 218491 CDS YP_049112.1 50119945 2881603 complement(1125938..1127665) 1 NC_004547.2 Similar to Agrobacterium tumefaciens ABC transporter, nucleotide binding/ATPase protein DfpD or atu6074 or agr_pti_146 SWALL:Q8U661 (EMBL:AE009426) (556 aa) fasta scores: E(): 1.7e-107, 54.13% id in 556 aa, and to Rhizobium meliloti peptide transport system ATP-binding ABC transporter protein r03119 or smc03268 SWALL:Q92LE6 (EMBL:AL591793) (625 aa) fasta scores: E(): 1.3e-93, 48.5% id in 567 aa; ABC transporter ATP-binding protein 1127665 2881603 ECA1005 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_049112.1 1125938 R 218491 CDS YP_049113.1 50119946 2881604 complement(1127662..1128600) 1 NC_004547.2 Similar to Agrobacterium tumefaciens ABC transporter, membrane spanning protein atu3435 or agr_l_2782 SWALL:Q8UAD9 (EMBL:AE009274) (341 aa) fasta scores: E(): 2.7e-69, 61.92% id in 302 aa, and to Rhizobium meliloti probable ABC transporter, permease protein ra1137 or sma2083 SWALL:Q92XV3 (EMBL:AE007299) (332 aa) fasta scores: E(): 5.3e-66, 65.92% id in 270 aa; ABC transporter permease 1128600 2881604 ECA1006 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_049113.1 1127662 R 218491 CDS YP_049114.1 50119947 2882154 complement(1128602..1129588) 1 NC_004547.2 Similar to Rhizobium meliloti probable ABC transporter, permease protein ra1138 or sma2085 SWALL:Q92XV2 (EMBL:AE007299) (328 aa) fasta scores: E(): 1.3e-81, 66.25% id in 323 aa, and to Agrobacterium tumefaciens ABC transporter, membrane spanning protein atu3434 or agr_l_2785 SWALL:Q8UAE0 (EMBL:AE009274) (347 aa) fasta scores: E(): 3.1e-79, 64.92% id in 325 aa; ABC transporter permease 1129588 2882154 ECA1007 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_049114.1 1128602 R 218491 CDS YP_049115.1 50119948 2882155 complement(1129642..1131228) 1 NC_004547.2 Similar to Agrobacterium tumefaciens ABC transporter, substrate binding protein atu3433 or agr_l_2786 SWALL:Q8UAE1 (EMBL:AE009273) (585 aa) fasta scores: E(): 1.7e-108, 52.87% id in 522 aa, and to Rhizobium meliloti probable extracellular solute-binding protein, family 5 ra1133 or sma2075 SWALL:Q92XV7 (EMBL:AE007299) (543 aa) fasta scores: E(): 1.6e-100, 49.81% id in 530 aa; ABC transporter substrate binding protein 1131228 2882155 ECA1008 Pectobacterium atrosepticum SCRI1043 ABC transporter substrate binding protein YP_049115.1 1129642 R 218491 CDS YP_049116.1 50119949 2882156 1131750..1134008 1 NC_004547.2 Similar to Rhodobacter sphaeroides biotin sulfoxide reductase SWALL:BISC_RHOSH (SWALL:P54934) (744 aa) fasta scores: E(): 6.3e-130, 48.13% id in 725 aa, and to Escherichia coli biotin sulfoxide reductase bisc or b3551 SWALL:BISC_ECOLI (SWALL:P20099) (777 aa) fasta scores: E(): 8.5e-72, 39.01% id in 751 aa; biotin sulfoxide reductase 1134008 2882156 ECA1009 Pectobacterium atrosepticum SCRI1043 biotin sulfoxide reductase YP_049116.1 1131750 D 218491 CDS YP_049117.1 50119950 2882142 1134065..1134883 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1026 or y3158 SWALL:Q8ZH83 (EMBL:AJ414146) (275 aa) fasta scores: E(): 2.2e-88, 88.72% id in 266 aa, and to Escherichia coli hypothetical protein ygdl or b2812 SWALL:YGDL_ECOLI (SWALL:Q46927) (268 aa) fasta scores: E(): 1.4e-78, 77.81% id in 266 aa; hypothetical protein 1134883 2882142 ECA1010 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049117.1 1134065 D 218491 CDS YP_049118.1 50119951 2882143 complement(1134898..1135353) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1027 or y3157 SWALL:AAM86707 (EMBL:AJ414146) (147 aa) fasta scores: E(): 1.3e-34, 64.28% id in 140 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein ygdk or b2811 or z4128 or ecs3671 SWALL:YGDK_ECOLI (SWALL:Q46926) (147 aa) fasta scores: E(): 2.4e-31, 60.27% id in 146 aa; Fe-S metabolism associated protein 1135353 2882143 ECA1011 Pectobacterium atrosepticum SCRI1043 Fe-S metabolism associated protein YP_049118.1 1134898 R 218491 CDS YP_049119.1 50119952 2884940 complement(1135386..1136591) 1 NC_004547.2 Similar to Escherichia coli cysteine sulfinate desulfinase CsdA or b2810 SWALL:CSDA_ECOLI (SWALL:Q46925) (401 aa) fasta scores: E(): 1.6e-104, 69.82% id in 401 aa, and to Salmonella typhimurium selenocysteine lyase csda or stm2984 SWALL:Q8ZMC3 (EMBL:AE008836) (401 aa) fasta scores: E(): 3.2e-101, 67.83% id in 401 aa; cysteine sulfinate desulfinase 1136591 csdA 2884940 csdA Pectobacterium atrosepticum SCRI1043 cysteine sulfinate desulfinase YP_049119.1 1135386 R 218491 CDS YP_049120.1 50119953 2882144 1136775..1136996 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 hypothetical lipoprotein ygdi precursor ygdi or b2809 or c3380 SWALL:YGDI_ECOLI (SWALL:Q46924) (75 aa) fasta scores: E(): 1.6e-14, 61.11% id in 72 aa, and to Shigella flexneri orf, conserved hypothetical protein ygdi or sf2823 SWALL:AAN44310 (EMBL:AE015296) (76 aa) fasta scores: E(): 4.2e-14, 59.72% id in 72 aa; lipoprotein 1136996 2882144 ECA1013 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_049120.1 1136775 D 218491 CDS YP_049121.1 50119954 2881293 complement(1137042..1137260) 1 NC_004547.2 Similar to Saccharomyces cerevisiae hypothetical 11.6 kDa protein in nut1-aro2 intergenic region precursor ygl149w or g1895 SWALL:YGO9_YEAST (SWALL:P53116) (101 aa) fasta scores: E(): 4.7, 37.09% id in 62 aa, and to Streptococcus pyogenes hypothetical protein Spym3_0087 spym3_0087 SWALL:Q8K8V4 (EMBL:AE014138) (102 aa) fasta scores: E(): 4.8, 33.33% id in 60 aa; hypothetical protein 1137260 2881293 ECA1014 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049121.1 1137042 R 218491 CDS YP_049122.1 50119955 2882357 1137533..1138456 1 NC_004547.2 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; DNA-binding transcriptional activator GcvA 1138456 gcvA 2882357 gcvA Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional activator GcvA YP_049122.1 1137533 D 218491 CDS YP_049123.1 50119956 2881294 1138546..1138941 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein ygdd ygdd or b2807 or c3377 or z4124 or ecs3667 or sf2821 SWALL:AAN44308 (EMBL:X73413) (131 aa) fasta scores: E(): 1.9e-42, 78.62% id in 131 aa, and to Salmonella typhimurium, and Salmonella typhi small membrane protein ygdd or stm2981 or sty3121 SWALL:Q8XEU8 (EMBL:AE008836) (131 aa) fasta scores: E(): 3.7e-41, 75.57% id in 131 aa; hypothetical protein 1138941 2881294 ECA1016 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049123.1 1138546 D 218491 CDS YP_049124.1 50119957 2881295 1138934..1140034 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1031 or y3152 SWALL:AAM86702 (EMBL:AJ414146) (368 aa) fasta scores: E(): 6.5e-129, 79.17% id in 365 aa, and to Salmonella typhimurium, and Salmonella typhi sam-dependent methyltransferase ygde or stm2980 or sty3120 SWALL:Q8XFI3 (EMBL:AE008836) (366 aa) fasta scores: E(): 5.3e-123, 75.41% id in 366 aa; RNA 2'-O-ribose methyltransferase 1140034 2881295 ECA1017 Pectobacterium atrosepticum SCRI1043 RNA 2'-O-ribose methyltransferase YP_049124.1 1138934 D 218491 CDS YP_049125.1 50119958 2882649 complement(1140092..1140874) 1 NC_004547.2 has 3'-5' exonuclease activity that preferentially acts on ssDNA; also 3'-phosphodiesterase activity at sites with 3' incised apurinic/apyrimidinic sites; can remove 3' phosphoglycolate groups; exonuclease IX 1140874 xni 2882649 xni Pectobacterium atrosepticum SCRI1043 exonuclease IX YP_049125.1 1140092 R 218491 CDS YP_049126.1 50119959 2885316 complement(1140952..1142316) 1 NC_004547.2 Similar to Salmonella typhimurium nucleotide binding ygdh or stm2969 SWALL:Q8ZMD2 (EMBL:AE008836) (454 aa) fasta scores: E(): 4.8e-158, 86.78% id in 454 aa, and to Yersinia pestis hypothetical protein ypo1033 or y3148 SWALL:AAM86698 (EMBL:AJ414146) (454 aa) fasta scores: E(): 2e-157, 86.12% id in 454 aa; lysine decarboxylase family protein 1142316 2885316 ECA1019 Pectobacterium atrosepticum SCRI1043 lysine decarboxylase family protein YP_049126.1 1140952 R 218491 CDS YP_049127.1 50119960 2885317 complement(1142628..1143476) 1 NC_004547.2 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 1143476 queF 2885317 queF Pectobacterium atrosepticum SCRI1043 7-cyano-7-deazaguanine reductase YP_049127.1 1142628 R 218491 CDS YP_049128.1 50119961 2884328 1143547..1144095 1 NC_004547.2 SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function; SecY interacting protein Syd 1144095 syd 2884328 syd Pectobacterium atrosepticum SCRI1043 SecY interacting protein Syd YP_049128.1 1143547 D 218491 CDS YP_049129.1 50119962 2883244 1144917..1146593 1 NC_004547.2 Previously sequenced as Erwinia carotovora exoenzymes regulatory protein AepA precursor SWALL:AEPA_ERWCA (SWALL:Q06555) (465 aa) fasta scores: E(): 1.2e-152, 90.28% id in 453 aa; exoenzyme regulatory protein 1146593 aepA 2883244 aepA Pectobacterium atrosepticum SCRI1043 exoenzyme regulatory protein YP_049129.1 1144917 D 218491 CDS YP_049130.1 50119963 2885318 1146848..1147294 1 NC_004547.2 Similar to Neisseria meningitidis transcriptional regulator, MarR family nmb1585 SWALL:Q9JYH5 (EMBL:AE002509) (143 aa) fasta scores: E(): 1.1e-18, 40.71% id in 140 aa, and to Neisseria meningitidis transcriptional regulator nma1774 SWALL:Q9JTH6 (EMBL:AL162757) (120 aa) fasta scores: E(): 2.4e-15, 45.53% id in 112 aa; MarR family transcriptional regulator 1147294 2885318 ECA1023 Pectobacterium atrosepticum SCRI1043 MarR family transcriptional regulator YP_049130.1 1146848 D 218491 CDS YP_049131.1 50119964 2885319 1147386..1147736 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo1037 SWALL:Q8ZH73 (EMBL:AJ414146) (110 aa) fasta scores: E(): 9.2e-20, 55.04% id in 109 aa, and to Salmonella typhi hypothetical protein yqcc or sty3104 SWALL:Q8Z438 (EMBL:AL627276) (109 aa) fasta scores: E(): 3.6e-15, 45.79% id in 107 aa; hypothetical protein 1147736 2885319 ECA1024 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049131.1 1147386 D 218491 CDS YP_049132.1 50119965 2885323 1147729..1148514 1 NC_004547.2 catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp; tRNA pseudouridine synthase C 1148514 2885323 ECA1025 Pectobacterium atrosepticum SCRI1043 tRNA pseudouridine synthase C YP_049132.1 1147729 D 218491 CDS YP_049133.1 50119966 2885324 1148570..1149025 1 NC_004547.2 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 1149025 2885324 ECA1026 Pectobacterium atrosepticum SCRI1043 flavodoxin YP_049133.1 1148570 D 218491 CDS YP_049134.1 50119967 2885325 complement(1149130..1149519) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1040 or y3141 SWALL:AAM86691 (EMBL:AJ414146) (129 aa) fasta scores: E(): 3.2e-38, 84.49% id in 129 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein yaeh or b0163 or c0200 or z0175 or ecs0167 or sf0155 SWALL:AAN41817 (EMBL:D26562) (128 aa) fasta scores: E(): 8.4e-38, 85.82% id in 127 aa; hypothetical protein 1149519 2885325 ECA1027 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049134.1 1149130 R 218491 CDS YP_049135.1 50119968 2885274 complement(1149575..1150402) 1 NC_004547.2 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 1150402 dapD 2885274 dapD Pectobacterium atrosepticum SCRI1043 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_049135.1 1149575 R 218491 CDS YP_049136.1 50119969 2881763 complement(1150431..1153145) 1 NC_004547.2 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; PII uridylyl-transferase 1153145 glnD 2881763 glnD Pectobacterium atrosepticum SCRI1043 PII uridylyl-transferase YP_049136.1 1150431 R 218491 CDS YP_049137.1 50119970 2881425 complement(1153258..1154052) 1 NC_004547.2 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 1154052 map 2881425 map Pectobacterium atrosepticum SCRI1043 methionine aminopeptidase YP_049137.1 1153258 R 218491 CDS YP_049138.1 50119971 2884478 1154397..1155122 1 NC_004547.2 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1155122 rpsB 2884478 rpsB Pectobacterium atrosepticum SCRI1043 30S ribosomal protein S2 YP_049138.1 1154397 D 218491 CDS YP_049139.1 50119972 2884230 1155257..1156108 1 NC_004547.2 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1156108 tsf 2884230 tsf Pectobacterium atrosepticum SCRI1043 elongation factor Ts YP_049139.1 1155257 D 218491 CDS YP_049140.1 50119973 2882680 1156279..1157004 1 NC_004547.2 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 1157004 pyrH 2882680 pyrH Pectobacterium atrosepticum SCRI1043 uridylate kinase YP_049140.1 1156279 D 218491 CDS YP_049141.1 50119974 2884872 1157130..1157687 1 NC_004547.2 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1157687 frr 2884872 frr Pectobacterium atrosepticum SCRI1043 ribosome recycling factor YP_049141.1 1157130 D 218491 CDS YP_049142.1 50119975 2882098 1157925..1159121 1 NC_004547.2 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1159121 dxr 2882098 dxr Pectobacterium atrosepticum SCRI1043 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_049142.1 1157925 D 218491 CDS YP_049143.1 50119976 2882937 1159320..1160081 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri undecaprenyl pyrophosphate synthetase upps or rth or b0174 or c0211 or z0185 or ecs0176 or sf0164 SWALL:UPPS_ECOLI (SWALL:Q47675) (253 aa) fasta scores: E(): 1.7e-79, 77.77% id in 252 aa; undecaprenyl pyrophosphate synthetase 1160081 uppS 2882937 uppS Pectobacterium atrosepticum SCRI1043 undecaprenyl pyrophosphate synthetase YP_049143.1 1159320 D 218491 CDS YP_049144.1 50119977 2881833 1160091..1160948 1 NC_004547.2 catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate; CDP-diglyceride synthase 1160948 cdsA 2881833 cdsA Pectobacterium atrosepticum SCRI1043 CDP-diglyceride synthase YP_049144.1 1160091 D 218491 CDS YP_049145.1 50119978 2881451 1160970..1162325 1 NC_004547.2 catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response; zinc metallopeptidase RseP 1162325 ecfE 2881451 ecfE Pectobacterium atrosepticum SCRI1043 zinc metallopeptidase RseP YP_049145.1 1160970 D 218491 CDS YP_049146.1 50119979 2881452 1162361..1164805 1 NC_004547.2 part of a complex with YfgL, YfiO, and NlpB involved in outer membrane protein biosynthesis; involved in the assembly of outer membrane proteins; outer membrane protein assembly factor YaeT 1164805 ecfK 2881452 ecfK Pectobacterium atrosepticum SCRI1043 outer membrane protein assembly factor YaeT YP_049146.1 1162361 D 218491 CDS YP_049147.1 50119980 2883328 1164946..1165443 1 NC_004547.2 Similar to Yersinia enterocolitica cationic 19 kDa outer membrane protein precursor OmpH SWALL:OMPH_YEREN (SWALL:P31519) (164 aa) fasta scores: E(): 3.7e-40, 84.24% id in 165 aa, and to Yersinia pestis cationic 19 kDa outer membrane protein precursor OmpH or ypo1053 or y3126 SWALL:OMPH_YERPE (SWALL:P58607) (165 aa) fasta scores: E(): 9.9e-42, 86.06% id in 165 aa; periplasmic chaperone 1165443 ompH 2883328 ompH Pectobacterium atrosepticum SCRI1043 periplasmic chaperone YP_049147.1 1164946 D 218491 CDS YP_049148.1 50119981 2882790 1165447..1166469 1 NC_004547.2 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1166469 lpxD 2882790 lpxD Pectobacterium atrosepticum SCRI1043 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_049148.1 1165447 D 218491 CDS YP_049149.1 50119982 2883890 1166572..1167027 1 NC_004547.2 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1167027 fabZ 2883890 fabZ Pectobacterium atrosepticum SCRI1043 (3R)-hydroxymyristoyl-ACP dehydratase YP_049149.1 1166572 D 218491 CDS YP_049150.1 50119983 2882739 1167032..1167820 1 NC_004547.2 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 1167820 lpxA 2882739 lpxA Pectobacterium atrosepticum SCRI1043 UDP-N-acetylglucosamine acyltransferase YP_049150.1 1167032 D 218491 CDS YP_049151.1 50119984 2882740 1167824..1168975 1 NC_004547.2 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; lipid-A-disaccharide synthase 1168975 lpxB 2882740 lpxB Pectobacterium atrosepticum SCRI1043 lipid-A-disaccharide synthase YP_049151.1 1167824 D 218491 CDS YP_049152.1 50119985 2885037 1168997..1169593 1 NC_004547.2 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 1169593 rnhB 2885037 rnhB Pectobacterium atrosepticum SCRI1043 ribonuclease HII YP_049152.1 1168997 D 218491 CDS YP_049153.1 50119986 2882737 1169670..1173152 1 NC_004547.2 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 1173152 dnaE 2882737 dnaE Pectobacterium atrosepticum SCRI1043 DNA polymerase III subunit alpha YP_049153.1 1169670 D 218491 CDS YP_049154.1 50119987 2885201 1173165..1174124 1 NC_004547.2 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 1174124 accA 2885201 accA Pectobacterium atrosepticum SCRI1043 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_049154.1 1173165 D 218491 CDS YP_049155.1 50119988 2885326 1174256..1174645 1 NC_004547.2 Similar to Escherichia coli hypothetical protein yaer or b0187 SWALL:YAER_ECOLI (SWALL:P52096) (129 aa) fasta scores: E(): 1.2e-37, 71.87% id in 128 aa, and to Shigella flexneri orf, conserved hypothetical protein yaer or sf0177 SWALL:AAN41839 (EMBL:AE015054) (138 aa) fasta scores: E(): 1.3e-37, 71.87% id in 128 aa; hypothetical protein 1174645 2885326 ECA1048 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049155.1 1174256 D 218491 CDS YP_049156.1 50119989 2885722 1174650..1175972 1 NC_004547.2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU; ATP-dependent; responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase; tRNA(Ile)-lysidine synthetase 1175972 tilS 2885722 tilS Pectobacterium atrosepticum SCRI1043 tRNA(Ile)-lysidine synthetase YP_049156.1 1174650 D 218491 CDS YP_049157.1 50119990 2885031 complement(1176058..1176318) 1 NC_004547.2 Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination; Rho-binding antiterminator 1176318 rof 2885031 rof Pectobacterium atrosepticum SCRI1043 Rho-binding antiterminator YP_049157.1 1176058 R 218491 CDS YP_049158.1 50119991 2885327 1176745..1177299 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo1065 SWALL:Q8ZH46 (EMBL:AJ414146) (182 aa) fasta scores: E(): 2.4e-56, 75.28% id in 178 aa, and to Escherichia coli O6 hypothetical protein yaeq or c0229 SWALL:AAN78721 (EMBL:AE016755) (181 aa) fasta scores: E(): 6e-48, 62.22% id in 180 aa; hypothetical protein 1177299 2885327 ECA1051 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049158.1 1176745 D 218491 CDS YP_049159.1 50119992 2883378 1177368..1178066 1 NC_004547.2 Similar to Escherichia coli copper homeostasis protein CutF precursor or NlpE or b0192 SWALL:CUTF_ECOLI (SWALL:P40710) (236 aa) fasta scores: E(): 8.9e-40, 49.55% id in 224 aa, and to Yersinia pestis copper homeostasis lipoprotein CutF or ypo1067 or y3110 SWALL:AAM86660 (EMBL:AJ414146) (242 aa) fasta scores: E(): 1.5e-46, 53.71% id in 229 aa; copper homeostasis and adhesion lipoprotein 1178066 cutF 2883378 cutF Pectobacterium atrosepticum SCRI1043 copper homeostasis and adhesion lipoprotein YP_049159.1 1177368 D 218491 CDS YP_049160.1 50119993 2881464 complement(1178139..1180703) 1 NC_004547.2 This protein performs the mismatch recognition step during the DNA repair process; DNA mismatch repair protein MutS 1180703 mutS 2881464 mutS Pectobacterium atrosepticum SCRI1043 DNA mismatch repair protein MutS YP_049160.1 1178139 R 218491 CDS YP_049161.1 50119994 2885328 1180862..1182331 1 NC_004547.2 Similar to Escherichia coli prophage cp4-6 integrase IntF or b0281 SWALL:INTF_ECOLI (SWALL:P71298) (466 aa) fasta scores: E(): 0.0029, 24.6% id in 443 aa, and to Xylella fastidiosa phage-related integrase xf0631 SWALL:Q9PFM6 (EMBL:AE003908) (413 aa) fasta scores: E(): 1.2, 24.71% id in 445 aa; integrase 1182331 2885328 ECA1054 Pectobacterium atrosepticum SCRI1043 integrase YP_049161.1 1180862 D 218491 CDS YP_049162.1 50119995 2885333 1182391..1182576 1 NC_004547.2 Similar to the N-terminal region of Escherichia coli O6 hypothetical protein c4514 SWALL:AAN82950 (EMBL:AE016769) (594 aa) fasta scores: E(): 4e-11, 70.83% id in 48 aa; hypothetical protein 1182576 2885333 ECA1055 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049162.1 1182391 D 218491 CDS YP_049163.1 50119996 2885334 1182640..1183911 1 NC_004547.2 Similar to Shigella flexneri reverse transcriptase s0042 SWALL:Q9AFX2 (EMBL:AF348706) (405 aa) fasta scores: E(): 0.046, 21.24% id in 353 aa, and to Streptococcus agalactiae prophage lambdasa1, reverse transcriptase/maturase family protein sag0567 SWALL:AAM99468 (EMBL:AE014217) (439 aa) fasta scores: E(): 0.97, 22.78% id in 373 aa; phage-related reverse transcriptase/maturase family protein 1183911 2885334 ECA1056 Pectobacterium atrosepticum SCRI1043 phage-related reverse transcriptase/maturase family protein YP_049163.1 1182640 D 218491 CDS YP_049164.1 50119997 2885335 1183908..1185917 1 NC_004547.2 Similar to Staphylococcus aureus orf7 protein SWALL:BAC22947 (EMBL:AB057421) (610 aa) fasta scores: E(): 5.2e-08, 23.82% id in 617 aa, and to Lactococcus lactis AbiK abiK SWALL:Q48614 (EMBL:U35629) (599 aa) fasta scores: E(): 0.001, 23.78% id in 454 aa; hypothetical protein 1185917 2885335 ECA1057 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049164.1 1183908 D 218491 CDS YP_049165.1 50119998 2885339 1186181..1186795 1 NC_004547.2 no significant database matches; hypothetical protein 1186795 2885339 ECA1058 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049165.1 1186181 D 218491 CDS YP_049166.1 50119999 2885340 1187197..1188408 1 NC_004547.2 Similar to Escherichia coli O157:H7 site specific recombinase ecs3512 SWALL:Q8X3D8 (EMBL:AP002562) (401 aa) fasta scores: E(): 3.9e-44, 35.44% id in 395 aa, and to Staphylococcus aureus transposase a from transposon tn554 SWALL:TNPA_STAAM (SWALL:P06696) (361 aa) fasta scores: E(): 0.039, 23.1% id in 303 aa; integrase 1188408 2885340 ECA1059 Pectobacterium atrosepticum SCRI1043 integrase YP_049166.1 1187197 D 218491 CDS YP_049167.1 50120000 2885341 1188401..1189894 1 NC_004547.2 Similar to Pasteurella multocida hypothetical protein Pm1948 SWALL:Q9CJP6 (EMBL:AE006231) (506 aa) fasta scores: E(): 7.1e-30, 27.86% id in 506 aa, and to Escherichia coli O157:H7 hypothetical protein z3943 or ecs3511 SWALL:Q8X972 (EMBL:AE005493) (441 aa) fasta scores: E(): 6e-29, 28.63% id in 433 aa; integrase 1189894 2885341 ECA1060 Pectobacterium atrosepticum SCRI1043 integrase YP_049167.1 1188401 D 218491 CDS YP_049168.1 50120001 2885387 1189894..1191858 1 NC_004547.2 Similar to Escherichia coli O157:H7 hypothetical protein Z3942 SWALL:Q8X403 (EMBL:AE005493) (470 aa) fasta scores: E(): 1.1e-27, 33% id in 506 aa, and to Pasteurella multocida hypothetical protein Pm1947 SWALL:Q9CJP7 (EMBL:AE006231) (678 aa) fasta scores: E(): 2.3e-39, 26.83% id in 641 aa; integrase 1191858 2885387 ECA1061 Pectobacterium atrosepticum SCRI1043 integrase YP_049168.1 1189894 D 218491 CDS YP_049169.1 50120002 2885388 1191839..1192258 1 NC_004547.2 Similar to Escherichia coli O157:H7 hypothetical protein Ecs3509 SWALL:Q8X5G1 (EMBL:AP002562) (132 aa) fasta scores: E(): 1.5e-12, 39.84% id in 128 aa, and to Pasteurella multocida hypothetical protein Pm1946 SWALL:Q9CJP8 (EMBL:AE006231) (136 aa) fasta scores: E(): 1.5e-10, 35.07% id in 134 aa; hypothetical protein 1192258 2885388 ECA1062 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049169.1 1191839 D 218491 CDS YP_049170.1 50120003 2885389 1192339..1192806 1 NC_004547.2 Similar to Escherichia coli O157:H7 hypothetical protein z3940 or ecs3508 SWALL:Q8X976 (EMBL:AE005493) (156 aa) fasta scores: E(): 0.0053, 26.66% id in 150 aa; hypothetical protein 1192806 2885389 ECA1063 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049170.1 1192339 D 218491 CDS YP_049171.1 50120004 2885390 complement(1192861..1193283) 1 NC_004547.2 no significant database matches; hypothetical protein 1193283 2885390 ECA1064 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049171.1 1192861 R 218491 CDS YP_049172.1 50120005 2885360 complement(1193409..1194704) 1 NC_004547.2 no significant database matches; hypothetical protein 1194704 2885360 ECA1065 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049172.1 1193409 R 218491 CDS YP_049173.1 50120006 2885361 complement(1194710..1195108) 1 NC_004547.2 no significant database matches; hypothetical protein 1195108 2885361 ECA1066 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049173.1 1194710 R 218491 CDS YP_049174.1 50120007 2885362 complement(1195301..1196644) 1 NC_004547.2 Similar to Chromobacterium violaceum hypothetical protein cv0650 SWALL:Q7P0B7 (EMBL:AE016912) (423 aa) fasta scores: E(): 1.3e-22, 38.4% id in 440 aa; hypothetical protein 1196644 2885362 ECA1067 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049174.1 1195301 R 218491 CDS YP_049175.1 50120008 2885336 1197376..1198215 1 NC_004547.2 Similar to Yersinia pestis hypothetical y4069 SWALL:AAM87613 (EMBL:AE014008) (195 aa) fasta scores: E(): 2.9e-36, 52.38% id in 189 aa, and to Erwinia pyrifoliae conserved hypothetical membrane protein SWALL:AAN04542 (EMBL:AY123045) (178 aa) fasta scores: E(): 4.6e-18, 37.05% id in 170 aa; hypothetical protein 1198215 2885336 ECA1068 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049175.1 1197376 D 218491 CDS YP_049176.1 50120009 2885337 complement(1198650..1199129) 1 NC_004547.2 Similar to Vibrio cholerae hcp=28 kDa secreted hydrophilic protein (HcpA or vca0017) and (Hcp or vc1415) SWALL:P72350 (EMBL:S81006) (172 aa) fasta scores: E(): 0.01, 36.64% id in 161 aa, and to Escherichia coli O157:H7 z0248 protein z0248 or ecs0216 SWALL:Q8X7X3 (EMBL:AE005197) (159 aa) fasta scores: E(): 8.6e-31, 52.83% id in 159 aa. The Yersinia pestis orthologue of this gene is described as a hemolysin co-regulated protein. Also similar to ECA1076 (49.057% identity in 159aa overlap) and ECA3672 (46.154% identity in 156aa overlap) and ECA0456 (45.912% identity in 159aa overlap).; hypothetical protein 1199129 2885337 ECA1069 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049176.1 1198650 R 218491 CDS YP_049177.1 50120010 2885338 1199330..1200754 1 NC_004547.2 Similar to Salmonella typhimurium 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylase stm2922 SWALL:Q8ZMG0 (EMBL:AE008833) (475 aa) fasta scores: E(): 1.6e-171, 89.87% id in 474 aa, and to Salmonella typhi hypothetical protein Sty3047 sty3047 SWALL:Q8Z475 (EMBL:AL627276) (475 aa) fasta scores: E(): 4.4e-171, 89.66% id in 474 aa; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase 1200754 2885338 ECA1070 Pectobacterium atrosepticum SCRI1043 3-polyprenyl-4-hydroxybenzoate carboxy-lyase YP_049177.1 1199330 D 218491 CDS YP_049178.1 50120011 2885236 1200769..1200996 1 NC_004547.2 Similar to Escherichia coli O157:H7 orf, hypothetical protein z4045 or ecs3591 SWALL:Q8X7Z8 (EMBL:AE005501) (78 aa) fasta scores: E(): 7.7e-25, 81.33% id in 75 aa, and to Salmonella typhimurium, and Salmonella typhi cytoplasmic protein stm2923 or sty3048 SWALL:Q8XEM2 (EMBL:AE008833) (78 aa) fasta scores: E(): 2.1e-24, 78.66% id in 75 aa; hypothetical protein 1200996 2885236 ECA1071 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049178.1 1200769 D 218491 CDS YP_049179.1 50120012 2885237 complement(1201077..1201706) 1 NC_004547.2 Similar to Pseudomonas putida glutathione S-transferase family protein pp2474 SWALL:AAN68086 (EMBL:AE016783) (206 aa) fasta scores: E(): 4.5e-48, 60.97% id in 205 aa, and to Vibrio vulnificus glutathione S-transferase vv20508 SWALL:AAO07458 (EMBL:AE016809) (205 aa) fasta scores: E(): 1e-39, 55.39% id in 204 aa; glutathione S-transferase 1201706 2885237 ECA1072 Pectobacterium atrosepticum SCRI1043 glutathione S-transferase YP_049179.1 1201077 R 218491 CDS YP_049180.1 50120013 2882934 complement(1201900..1202667) 1 NC_004547.2 Part of the FecBCDE citrate-dependent iron (III) transport system; iron-dicitrate transporter ATP-binding subunit 1202667 fecE 2882934 fecE Pectobacterium atrosepticum SCRI1043 iron-dicitrate transporter ATP-binding subunit YP_049180.1 1201900 R 218491 CDS YP_049181.1 50120014 2882933 complement(1202668..1203627) 1 NC_004547.2 Ferric citrate binds FecA and is transported across the outer membrane while transmits a signal across the cytoplasmic membrane protein FecR. FecR transmits a signal across the membrane and activates the cytoplasmic FecI that directs the RNA polymerase to express the fecABCDE operon (which encodes the ferric citrate outer membrane receptor and the ferric citrate ABC transporter), as well as fecIR. FecD is one of two (along with FecC) integral membrane protein components of the iron dicitrate ABC transporter.; iron-dicitrate transporter subunit FecD 1203627 fecD 2882933 fecD Pectobacterium atrosepticum SCRI1043 iron-dicitrate transporter subunit FecD YP_049181.1 1202668 R 218491 CDS YP_049182.1 50120015 2882932 complement(1203627..1204622) 1 NC_004547.2 part of the FecBCDE citrate-dependent iron (III) transport system; iron-dicitrate transporter permease subunit 1204622 fecC 2882932 fecC Pectobacterium atrosepticum SCRI1043 iron-dicitrate transporter permease subunit YP_049182.1 1203627 R 218491 CDS YP_049183.1 50120016 2885603 complement(1204619..1205533) 1 NC_004547.2 part of the ABC transporter involved in the uptake of citrate-dependent Fe(3+); iron-dicitrate transporter substrate-binding subunit 1205533 fecB 2885603 fecB Pectobacterium atrosepticum SCRI1043 iron-dicitrate transporter substrate-binding subunit YP_049183.1 1204619 R 218491 CDS YP_049184.1 50120017 2885602 complement(1205607..1207955) 1 NC_004547.2 Similar to Escherichia coli iron FecA or b4291 SWALL:FECA_ECOLI (SWALL:P13036) (774 aa) fasta scores: E(): 0, 80.56% id in 782 aa, and to Pseudomonas aeruginosa FecA or pa3901 SWALL:Q9HXB2 (EMBL:AE004807) (784 aa) fasta scores: E(): 1.6e-196, 62.43% id in 788 aa; iron(III) dicitrate transport protein 1207955 fecA 2885602 fecA Pectobacterium atrosepticum SCRI1043 iron(III) dicitrate transport protein YP_049184.1 1205607 R 218491 CDS YP_049185.1 50120018 2882722 complement(1208167..1209129) 1 NC_004547.2 with FecA forms the FecAR signal transduction system; ferric citrate binds FecA and transmits a signal across the outer membrane to FecR. FecR transmits a signal across the cytoplasmic membrane and activates the sigma 70 protein FecI that directs the RNA polymerase to express the fecABCDE operon; fec operon regulator FecR 1209129 fecR 2882722 fecR Pectobacterium atrosepticum SCRI1043 fec operon regulator FecR YP_049185.1 1208167 R 218491 CDS YP_049186.1 50120019 2882721 complement(1209126..1209647) 1 NC_004547.2 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor regulates the genes for iron dicitrate transport; RNA polymerase sigma factor FecI 1209647 fecI 2882721 fecI Pectobacterium atrosepticum SCRI1043 RNA polymerase sigma factor FecI YP_049186.1 1209126 R 218491 CDS YP_049187.1 50120020 2885238 complement(1209693..1209875) 1 NC_004547.2 no significant database matches; hypothetical protein 1209875 2885238 ECA1080 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049187.1 1209693 R 218491 CDS YP_049188.1 50120021 2885226 1209940..1211562 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein ylab or c0575 SWALL:AAN79053 (EMBL:AE016756) (518 aa) fasta scores: E(): 1.1e-54, 35.17% id in 506 aa, and to Shigella flexneri orf, conserved hypothetical protein sf0402 SWALL:AAN42058 (EMBL:AE015072) (518 aa) fasta scores: E(): 3.2e-53, 34.58% id in 506 aa; transcriptional regulator 1211562 2885226 ECA1081 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_049188.1 1209940 D 218491 CDS YP_049189.1 50120022 2884715 1211683..1212024 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri PhnA protein or b4108 or c5113 or z5710 or ecs5090 or sf4115 SWALL:PHNA_ECOLI (SWALL:P16680) (111 aa) fasta scores: E(): 1.1e-29, 76.36% id in 110 aa, and to Yersinia pestis hypothetical protein ypo2730 or PhnA or y1563 SWALL:Q8ZD62 (EMBL:AJ414153) (113 aa) fasta scores: E(): 4.9e-33, 79.64% id in 113 aa; phosphonoacetate hydrolase 1212024 phnA 2884715 phnA Pectobacterium atrosepticum SCRI1043 phosphonoacetate hydrolase YP_049189.1 1211683 D 218491 CDS YP_049190.1 50120023 2885530 1212161..1213231 1 NC_004547.2 membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan; murein hydrolase B 1213231 mltB 2885530 mltB Pectobacterium atrosepticum SCRI1043 murein hydrolase B YP_049190.1 1212161 D 218491 CDS YP_049191.1 50120024 2885227 1213819..1214541 1 NC_004547.2 Similar to Pseudomonas putida membrane protein, pp4663 SWALL:AAN70236 (EMBL:AE016791) (254 aa) fasta scores: E(): 6.2e-44, 56.84% id in 241 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0278 pa0278 SWALL:Q9I6L2 (EMBL:AE004466) (250 aa) fasta scores: E(): 8.1e-44, 55.04% id in 238 aa; hypothetical protein 1214541 2885227 ECA1084 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049191.1 1213819 D 218491 CDS YP_049192.1 50120025 2885228 complement(1214538..1215431) 1 NC_004547.2 Similar to Ralstonia solanacearum probable transcription regulator protein rsp1267 or rs05312 SWALL:Q8XQG0 (EMBL:AL646083) (294 aa) fasta scores: E(): 7.6e-52, 47.27% id in 294 aa, and to Brucella melitensis transcriptional regulatory protein, LysR family bmeii1077 SWALL:Q8YB24 (EMBL:AE009740) (294 aa) fasta scores: E(): 2.4e-46, 44.71% id in 293 aa; LysR family transcriptional regulator 1215431 2885228 ECA1085 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_049192.1 1214538 R 218491 CDS YP_049193.1 50120026 2885222 complement(1215511..1216218) 1 NC_004547.2 Similar to the C-terminal regions of several including Pseudomonas aeruginosa hypothetical protein Pa1107 pa1107 SWALL:Q9I4M8 (EMBL:AE004541) (398 aa) fasta scores: E(): 2.1e-17, 39.68% id in 189 aa, and to Xanthomonas axonopodis ggdef family protein xac1939 SWALL:Q8PL67 (EMBL:AE011829) (948 aa) fasta scores: E(): 5.2e-16, 37.43% id in 203 aa; signaling protein 1216218 2885222 ECA1086 Pectobacterium atrosepticum SCRI1043 signaling protein YP_049193.1 1215511 R 218491 CDS YP_049194.1 50120027 2885223 complement(1216205..1216657) 1 NC_004547.2 Similar to Leptospira interrogans hypothetical protein la1420 SWALL:AAN48619 (EMBL:AE011322) (124 aa) fasta scores: E(): 0.0042, 31.06% id in 132 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0170 SWALL:Q9I6W2 (EMBL:AE004455) (126 aa) fasta scores: E(): 0.048, 30.88% id in 136 aa; lipoprotein 1216657 2885223 ECA1087 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_049194.1 1216205 R 218491 CDS YP_049195.1 50120028 2885224 complement(1216659..1217213) 1 NC_004547.2 Similar to Leptospira interrogans conserved hypothetical protein la1421 SWALL:AAN48620 (EMBL:AE011322) (184 aa) fasta scores: E(): 9.5e-09, 26.94% id in 167 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0171 SWALL:Q9I6W1 (EMBL:AE004455) (180 aa) fasta scores: E(): 2.9e-06, 27.38% id in 168 aa; hypothetical protein 1217213 2885224 ECA1088 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049195.1 1216659 R 218491 CDS YP_049196.1 50120029 2885225 complement(1217227..1218471) 1 NC_004547.2 Similar to the C terminal regions of Pseudomonas aeruginosa hypothetical protein Pa0172 SWALL:Q9I6W0 (EMBL:AE004455) (663 aa) fasta scores: E(): 8.8e-25, 35.13% id in 259 aa, and to Leptospira interrogans serine/threonine protein kinases la1422 SWALL:AAN48621 (EMBL:AE011322) (1780 aa) fasta scores: E(): 6.6e-23, 29.93% id in 324 aa; hypothetical protein 1218471 2885225 ECA1089 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049196.1 1217227 R 218491 CDS YP_049197.1 50120030 2885219 complement(1218826..1220019) 1 NC_004547.2 Weakly similar to Thermotoga maritima lipase, tm1350 SWALL:Q9X171 (EMBL:AE001789) (259 aa) fasta scores: E(): 3e-06, 28.31% id in 226 aa, and to Yersinia pestis membrane protein ypo4014 or y4035 SWALL:Q8ZA12 (EMBL:AJ414160) (487 aa) fasta scores: E(): 6.9e-07, 24.4% id in 295 aa; lipoprotein 1220019 2885219 ECA1090 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_049197.1 1218826 R 218491 CDS YP_049198.1 50120031 2885220 1220231..1220965 1 NC_004547.2 Similar to Escherichia coli uxu operon transcriptional regulator UxuR or b4324 SWALL:UXUR_ECOLI (SWALL:P39161) (257 aa) fasta scores: E(): 2.8e-47, 54.91% id in 244 aa, and to Yersinia pestis transcriptional regulatory protein ypo1279 or UxuR or y2904 SWALL:Q8ZGL0 (EMBL:AJ414147) (266 aa) fasta scores: E(): 1e-67, 71.95% id in 246 aa; GntR family transcriptional regulator 1220965 2885220 ECA1092 Pectobacterium atrosepticum SCRI1043 GntR family transcriptional regulator YP_049198.1 1220231 D 218491 CDS YP_049199.1 50120032 2882866 1221233..1222429 1 NC_004547.2 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; mannonate dehydratase 1222429 uxuA 2882866 uxuA Pectobacterium atrosepticum SCRI1043 mannonate dehydratase YP_049199.1 1221233 D 218491 CDS YP_049200.1 50120033 2885605 complement(1222651..1223694) 1 NC_004547.2 Similar to Erwinia carotovora pectate lyase PelB SWALL:Q47471 (EMBL:X79232) (347 aa) fasta scores: E(): 1.3e-129, 93.66% id in 347 aa, and to Erwinia carotovora pectate lyase Pel-3 SWALL:Q47465 (EMBL:L32172) (347 aa) fasta scores: E(): 1.6e-128, 92.5% id in 347 aa, and to Erwinia chrysanthemi endo-pectate lyase precursor PelI SWALL:O50325 (EMBL:Y13340) (344 aa) fasta scores: E(): 6e-87, 64.57% id in 350 aa.; pectate lyase 1223694 pelI 2885605 pelI Pectobacterium atrosepticum SCRI1043 pectate lyase YP_049200.1 1222651 R 218491 CDS YP_049201.1 50120034 2881646 1224544..1225752 1 NC_004547.2 Similar to Erwinia carotovora endo-polygalacturonase precursor PehA SWALL:PGL2_ERWCA (SWALL:P26509) (402 aa) fasta scores: E(): 1.4e-143, 97.76% id in 402 aa, and to Erwinia carotovora Peh precursor SWALL:Q9S5V7 (EMBL:AB022681) (402 aa) fasta scores: E(): 1.3e-140, 95.77% id in 402 aa; endo-polygalacturonase 1225752 pehA 2881646 pehA Pectobacterium atrosepticum SCRI1043 endo-polygalacturonase YP_049201.1 1224544 D 218491 CDS YP_049202.1 50120035 2885221 complement(1225995..1227164) 1 NC_004547.2 Similar to Pseudomonas putida protein secretion ABC efflux system, membrane fusion protein pp0803 SWALL:AAN66428 (EMBL:AE016777) (394 aa) fasta scores: E(): 9.1e-67, 54.23% id in 378 aa, and to Escherichia coli O157:H7 membrane spanning export protein z0635 or ecs0544 SWALL:Q8XD11 (EMBL:AE005229) (391 aa) fasta scores: E(): 2.9e-66, 54.3% id in 372 aa; type I secretion protein 1227164 2885221 ECA1096 Pectobacterium atrosepticum SCRI1043 type I secretion protein YP_049202.1 1225995 R 218491 CDS YP_049203.1 50120036 2885216 complement(1227176..1229320) 1 NC_004547.2 Similar to Pseudomonas putida protein secretion ABC efflux system, permease and ATP-binding protein pp0804 SWALL:AAN66429 (EMBL:AE016777) (722 aa) fasta scores: E(): 5.9e-111, 46.31% id in 691 aa, and to Salmonella typhi type i secretion protein, ATP-binding protein sty2877 SWALL:Q8Z4H9 (EMBL:AL627276) (718 aa) fasta scores: E(): 1.4e-103, 42.34% id in 692 aa; type I secretion protein, ATP-binding protein 1229320 2885216 ECA1097 Pectobacterium atrosepticum SCRI1043 type I secretion protein, ATP-binding protein YP_049203.1 1227176 R 218491 CDS YP_049204.1 50120037 2885217 complement(1229354..1230796) 1 NC_004547.2 Similar to Escherichia coli O157:H7 outer membrane export protein z0608 or ecs0540 SWALL:Q8XD20 (EMBL:AE005228) (451 aa) fasta scores: E(): 2.7e-75, 50.56% id in 439 aa, and to Ralstonia solanacearum outer membrane efflux transmembrane protein rsp1181 or rs06134 SWALL:Q8XQP1 (EMBL:AL646083) (483 aa) fasta scores: E(): 1.9e-23, 29.39% id in 398 aa; type I secretion protein 1230796 2885217 ECA1098 Pectobacterium atrosepticum SCRI1043 type I secretion protein YP_049204.1 1229354 R 218491 CDS YP_049205.1 50120038 2885218 complement(1231301..1242148) 1 NC_004547.2 Similar to Salmonella typhi protein sty2875 SWALL:Q8Z4I1 (EMBL:AL627276) (3624 aa) fasta scores: E(): 1.9e-41, 26.46% id in 3438 aa, and to Yersinia pestis autotransporter protein yaph or ypo1004 SWALL:Q8ZHA1 (EMBL:AJ414146) (3705 aa) fasta scores: E(): 8e-31, 23.21% id in 3584 aa; hypothetical protein 1242148 2885218 ECA1099 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049205.1 1231301 R 218491 CDS YP_049206.1 50120039 2885213 complement(1242166..1245936) 1 NC_004547.2 Similar to Escherichia coli O157:H7 hypothetical protein z0609 or ecs0541 SWALL:Q8XD19 (EMBL:AE005228) (1461 aa) fasta scores: E(): 1.7e-61, 34.15% id in 1253 aa, and to Salmonella typhi proline/threonine-rich protein SWALL:Q9X6M3 (EMBL:AF139831) (1605 aa) fasta scores: E(): 1e-14, 27.68% id in 1239 aa; hypothetical protein 1245936 2885213 ECA1100 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049206.1 1242166 R 218491 CDS YP_049207.1 50120040 2885214 1246646..1248292 1 NC_004547.2 efflux pump for the antibacterial peptide microcin J25; multidrug transporter membrane component/ATP-binding protein 1248292 2885214 ECA1101 Pectobacterium atrosepticum SCRI1043 multidrug transporter membrane component/ATP-binding protein YP_049207.1 1246646 D 218491 CDS YP_049208.1 50120041 2884179 1248508..1249548 1 NC_004547.2 Similar to Erwinia chrysanthemi L-asparaginase precursor AnsB or Asn SWALL:ASPG_ERWCH (SWALL:P06608) (348 aa) fasta scores: E(): 8.8e-95, 77.16% id in 346 aa, and to Salmonella typhimurium L-asparaginase stm3598 SWALL:Q8ZLD3 (EMBL:AE008866) (347 aa) fasta scores: E(): 9.5e-87, 70.23% id in 346 aa; L-asparaginase 1249548 ansB1 2884179 ansB1 Pectobacterium atrosepticum SCRI1043 L-asparaginase YP_049208.1 1248508 D 218491 CDS YP_049209.1 50120042 2884127 1250102..1250623 1 NC_004547.2 type II enzyme similar to type I but differentially regulated and with a lower Km; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 1250623 aroL 2884127 aroL Pectobacterium atrosepticum SCRI1043 shikimate kinase YP_049209.1 1250102 D 218491 CDS YP_049210.1 50120043 2885215 1250762..1251046 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3213 or y0973 SWALL:AAM84554 (EMBL:AJ414155) (95 aa) fasta scores: E(): 8.5e-26, 75.53% id in 94 aa, and to Salmonella typhi hypothetical protein Sty0424 SWALL:Q8Z8Y9 (EMBL:AL627266) (94 aa) fasta scores: E(): 4.3e-24, 73.4% id in 94 aa; hypothetical protein 1251046 2885215 ECA1104 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049210.1 1250762 D 218491 CDS YP_049211.1 50120044 2884636 1251539..1253329 1 NC_004547.2 Similar to Yersinia pestis methyl-accepting chemotaxis protein Tsr2 or ypo1229 SWALL:Q8ZGQ7 (EMBL:AJ414147) (595 aa) fasta scores: E(): 1.4e-120, 62.91% id in 596 aa, and to Ralstonia solanacearum methyl-accepting chemotaxis transmembrane protein rsc0606 or rs06104 SWALL:Q8Y1T3 (EMBL:AL646060) (617 aa) fasta scores: E(): 3.5e-102, 52.42% id in 599 aa; methyl-accepting chemotaxis protein 1253329 2884636 ECA1105 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_049211.1 1251539 D 218491 CDS YP_049212.1 50120045 2884508 complement(1253391..1254320) 1 NC_004547.2 Required for efficient pilin antigenic variation; recombination associated protein 1254320 rdgC 2884508 rdgC Pectobacterium atrosepticum SCRI1043 recombination associated protein YP_049212.1 1253391 R 218491 CDS YP_049213.1 50120046 2884637 1254672..1255583 1 NC_004547.2 catalyzes phosphorylation of fructose; cytosolic enzyme; fructokinase 1255583 2884637 ECA1107 Pectobacterium atrosepticum SCRI1043 fructokinase YP_049213.1 1254672 D 218491 CDS YP_049214.1 50120047 2884426 complement(1255587..1259270) 1 NC_004547.2 Similar to Escherichia coli exonuclease SbcC or RmuA or b0397 SWALL:SBCC_ECOLI (SWALL:P13458) (1048 aa) fasta scores: E(): 2.3e-52, 44.02% id in 1231 aa, and to Yersinia pestis ATP-dependent dsdna exonuclease SbcC or y0976 SWALL:AAM84557 (EMBL:AE013701) (1229 aa) fasta scores: E(): 2e-154, 50.04% id in 1233 aa; exonuclease 1259270 sbcC 2884426 sbcC Pectobacterium atrosepticum SCRI1043 exonuclease YP_049214.1 1255587 R 218491 CDS YP_049215.1 50120048 2884427 complement(1259267..1260493) 1 NC_004547.2 with SbcC cleaves DNA hairpin structure, also has 5' single-strand endonuclease activity; exonuclease SbcD 1260493 sbcD 2884427 sbcD Pectobacterium atrosepticum SCRI1043 exonuclease SbcD YP_049215.1 1259267 R 218491 CDS YP_049216.1 50120049 2883952 1260789..1261478 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 phosphate regulon transcriptional regulatory protein PhoB or b0399 or z0497 or ecs0449 SWALL:PHOB_ECOLI (SWALL:P08402) (229 aa) fasta scores: E(): 1.5e-81, 89.08% id in 229 aa, and to Yersinia pestis phosphate regulon transcriptional regulatory protein PhoB or ypo3205 SWALL:Q8ZC21 (EMBL:AJ414155) (229 aa) fasta scores: E(): 1.6e-84, 93.88% id in 229 aa; phosphate regulon response regulator 1261478 phoB 2883952 phoB Pectobacterium atrosepticum SCRI1043 phosphate regulon response regulator YP_049216.1 1260789 D 218491 CDS YP_049217.1 50120050 2883717 1261506..1262828 1 NC_004547.2 membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB; phosphate regulon sensor protein 1262828 phoR 2883717 phoR Pectobacterium atrosepticum SCRI1043 phosphate regulon sensor protein YP_049217.1 1261506 D 218491 CDS YP_049218.1 50120051 2884638 1262844..1263782 1 NC_004547.2 Similar to Yersinia pestis phosphate binding protein PstS or ypo3203 or y0980 SWALL:Q8ZC23 (EMBL:AJ414155) (354 aa) fasta scores: E(): 1.9e-76, 68.88% id in 286 aa, and to Pseudomonas aeruginosa phosphate binding protein psts or pa5369 SWALL:Q9Z9M3 (EMBL:AB017492) (323 aa) fasta scores: E(): 1.3e-62, 54.91% id in 295 aa; phosphate binding protein 1263782 2884638 ECA1112 Pectobacterium atrosepticum SCRI1043 phosphate binding protein YP_049218.1 1262844 D 218491 CDS YP_049219.1 50120052 2884670 1264025..1265131 1 NC_004547.2 catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 1265131 2884670 ECA1113 Pectobacterium atrosepticum SCRI1043 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_049219.1 1264025 D 218491 CDS YP_049220.1 50120053 2884103 1265611..1266930 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi branched-chain amino acid transport system II carrier protein BrnQ or stm0399 or sty0435 SWALL:BRNQ_SALTY (SWALL:P14931) (439 aa) fasta scores: E(): 3.3e-125, 77.13% id in 433 aa, and to Yersinia pestis branched-chain amino acid transport system II carrier protein BrnQ or ypo3202 or y0981 SWALL:Q8ZC24 (EMBL:AJ414155) (439 aa) fasta scores: E(): 1.6e-132, 79.49% id in 439 aa; branched-chain amino acid transport system II carrier protein 1266930 brnQ 2884103 brnQ Pectobacterium atrosepticum SCRI1043 branched-chain amino acid transport system II carrier protein YP_049220.1 1265611 D 218491 CDS YP_049221.1 50120054 2882460 1267070..1268446 1 NC_004547.2 cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; proline-specific permease 1268446 proY 2882460 proY Pectobacterium atrosepticum SCRI1043 proline-specific permease YP_049221.1 1267070 D 218491 CDS YP_049222.1 50120055 2884671 complement(1268505..1269779) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo2470 or y1720 SWALL:Q8ZDT6 (EMBL:AJ414152) (415 aa) fasta scores: E(): 1.4e-108, 66.26% id in 415 aa, and to Salmonella typhi membrane protein sty0618 or ybdg or t2292 SWALL:Q8Z8M7 (EMBL:AL627267) (415 aa) fasta scores: E(): 6.9e-100, 62.71% id in 405 aa; hypothetical protein 1269779 2884671 ECA1116 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049222.1 1268505 R 218491 CDS YP_049223.1 50120056 2884672 complement(1269999..1270601) 1 NC_004547.2 Similar to Yersinia pestis alkyl hydroperoxide reductase subunit C AhpC or ypo3194 or y0988 SWALL:AAM84569 (EMBL:AJ414155) (200 aa) fasta scores: E(): 2.6e-76, 91.5% id in 200 aa, and to Vibrio vulnificus peroxiredoxin vv10453 SWALL:AAO08975 (EMBL:AE016798) (202 aa) fasta scores: E(): 1.4e-61, 73.5% id in 200 aa; peroxidase 1270601 2884672 ECA1117 Pectobacterium atrosepticum SCRI1043 peroxidase YP_049223.1 1269999 R 218491 CDS YP_049224.1 50120057 2884673 complement(1270862..1271443) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo3193 SWALL:Q8ZC31 (EMBL:AJ414155) (193 aa) fasta scores: E(): 1.5e-53, 70.98% id in 193 aa, and to Escherichia coli hypothetical protein yajb or b0404 SWALL:YAJB_ECOLI (SWALL:P21515) (193 aa) fasta scores: E(): 1.5e-45, 58.54% id in 193 aa; hypothetical protein 1271443 2884673 ECA1118 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049224.1 1270862 R 218491 CDS YP_049225.1 50120058 2882683 1271755..1272822 1 NC_004547.2 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 1272822 queA 2882683 queA Pectobacterium atrosepticum SCRI1043 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_049225.1 1271755 D 218491 CDS YP_049226.1 50120059 2884301 1272920..1274065 1 NC_004547.2 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 1274065 tgt 2884301 tgt Pectobacterium atrosepticum SCRI1043 queuine tRNA-ribosyltransferase YP_049226.1 1272920 D 218491 CDS YP_049227.1 50120060 2884810 1274175..1274507 1 NC_004547.2 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 1274507 yajC 2884810 yajC Pectobacterium atrosepticum SCRI1043 preprotein translocase subunit YajC YP_049227.1 1274175 D 218491 CDS YP_049228.1 50120061 2884413 1274535..1276382 1 NC_004547.2 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1276382 secD 2884413 secD Pectobacterium atrosepticum SCRI1043 preprotein translocase subunit SecD YP_049228.1 1274535 D 218491 CDS YP_049229.1 50120062 2884409 1276393..1277361 1 NC_004547.2 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1277361 secF 2884409 secF Pectobacterium atrosepticum SCRI1043 preprotein translocase subunit SecF YP_049229.1 1276393 D 218491 CDS YP_049230.1 50120063 2884811 complement(1277558..1278127) 1 NC_004547.2 Similar to Escherichia coli hypothetical lipoprotein yaji precursor yaji or b0412 SWALL:YAJI_ECOLI (SWALL:P46122) (179 aa) fasta scores: E(): 7.9e-16, 34.46% id in 177 aa, and to Salmonella typhimurium outer membrane lipoprotein yaji or stm0414 SWALL:Q8ZRD6 (EMBL:AE008714) (179 aa) fasta scores: E(): 9.1e-16, 34.46% id in 177 aa; hypothetical protein 1278127 2884811 ECA1124 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049230.1 1277558 R 218491 CDS YP_049231.1 50120064 2884812 1278470..1278919 1 NC_004547.2 Similar to Salmonella typhimurium hypothetical protein ybad or stm0415 SWALL:YBAD_SALTY (SWALL:Q8ZRD5) (149 aa) fasta scores: E(): 1.3e-50, 89.26% id in 149 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein ybad or b0413 or c0523 or z0514 or ecs0466 SWALL:YBAD_ECOLI (SWALL:P25538) (149 aa) fasta scores: E(): 1.6e-50, 89.26% id in 149 aa; transcriptional regulator NrdR 1278919 nrdR 2884812 nrdR Pectobacterium atrosepticum SCRI1043 transcriptional regulator NrdR YP_049231.1 1278470 D 218491 CDS YP_049232.1 50120065 2884783 1278982..1280091 1 NC_004547.2 riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil; bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase 1280091 ribD 2884783 ribD Pectobacterium atrosepticum SCRI1043 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase YP_049232.1 1278982 D 218491 CDS YP_049233.1 50120066 2884733 1280201..1280677 1 NC_004547.2 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 1280677 ribH 2884733 ribH Pectobacterium atrosepticum SCRI1043 6,7-dimethyl-8-ribityllumazine synthase YP_049233.1 1280201 D 218491 CDS YP_049234.1 50120067 2883752 1280702..1281121 1 NC_004547.2 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 1281121 nusB 2883752 nusB Pectobacterium atrosepticum SCRI1043 transcription antitermination protein NusB YP_049234.1 1280702 D 218491 CDS YP_049235.1 50120068 2884294 1281190..1282170 1 NC_004547.2 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 1282170 thiL 2884294 thiL Pectobacterium atrosepticum SCRI1043 thiamine monophosphate kinase YP_049235.1 1281190 D 218491 CDS YP_049236.1 50120069 2884906 1282175..1282681 1 NC_004547.2 hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate; phosphatidylglycerophosphatase A 1282681 pgpA 2884906 pgpA Pectobacterium atrosepticum SCRI1043 phosphatidylglycerophosphatase A YP_049236.1 1282175 D 218491 CDS YP_049237.1 50120070 2882099 complement(1282733..1284598) 1 NC_004547.2 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 1284598 dxs 2882099 dxs Pectobacterium atrosepticum SCRI1043 1-deoxy-D-xylulose-5-phosphate synthase YP_049237.1 1282733 R 218491 CDS YP_049238.1 50120071 2881966 complement(1284617..1285528) 1 NC_004547.2 Similar to Escherichia coli geranyltranstransferase IspA or b0421 SWALL:ISPA_ECOLI (SWALL:P22939) (299 aa) fasta scores: E(): 4.8e-79, 71.76% id in 301 aa; geranyltranstransferase 1285528 ispA 2881966 ispA Pectobacterium atrosepticum SCRI1043 geranyltranstransferase YP_049238.1 1284617 R 218491 CDS YP_049239.1 50120072 2882645 complement(1285525..1285773) 1 NC_004547.2 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 1285773 xseB 2882645 xseB Pectobacterium atrosepticum SCRI1043 exodeoxyribonuclease VII small subunit YP_049239.1 1285525 R 218491 CDS YP_049240.1 50120073 2884292 1286027..1287475 1 NC_004547.2 Required for the synthesis of the thiazole moiety; thiamine biosynthesis protein ThiI 1287475 thiI 2884292 thiI Pectobacterium atrosepticum SCRI1043 thiamine biosynthesis protein ThiI YP_049240.1 1286027 D 218491 CDS YP_049241.1 50120074 2884293 complement(1287511..1288101) 1 NC_004547.2 Similar to Escherichia coli 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis enzyme ThiJ or b0424 SWALL:THIJ_ECOLI (SWALL:Q46948) (196 aa) fasta scores: E(): 8.7e-55, 70.91% id in 196 aa; DJ-1 family protein 1288101 thiJ 2884293 thiJ Pectobacterium atrosepticum SCRI1043 DJ-1 family protein YP_049241.1 1287511 R 218491 CDS YP_049242.1 50120075 2881848 complement(1288064..1288972) 1 NC_004547.2 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; 2-dehydropantoate 2-reductase 1288972 panE 2881848 panE Pectobacterium atrosepticum SCRI1043 2-dehydropantoate 2-reductase YP_049242.1 1288064 R 218491 CDS YP_049243.1 50120076 2885726 1289161..1289652 1 NC_004547.2 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; nucleotide-binding protein 1289652 2885726 ECA1137 Pectobacterium atrosepticum SCRI1043 nucleotide-binding protein YP_049243.1 1289161 D 218491 CDS YP_049244.1 50120077 2885727 complement(1289714..1291078) 1 NC_004547.2 Similar to Yersinia pestis transporter ypo3169 or y1017 SWALL:AAM84598 (EMBL:AJ414155) (456 aa) fasta scores: E(): 3.6e-130, 78.41% id in 454 aa, and to Escherichia coli O6 hypothetical transport protein yajr or c0538 SWALL:AAN79016 (EMBL:AE016756) (520 aa) fasta scores: E(): 2.3e-119, 71.58% id in 454 aa; transporter 1291078 2885727 ECA1138 Pectobacterium atrosepticum SCRI1043 transporter YP_049244.1 1289714 R 218491 CDS YP_049245.1 50120078 2882871 complement(1291267..1292157) 1 NC_004547.2 converts protoheme IX and farnesyl diphosphate to heme O; protoheme IX farnesyltransferase 1292157 cyoE 2882871 cyoE Pectobacterium atrosepticum SCRI1043 protoheme IX farnesyltransferase YP_049245.1 1291267 R 218491 CDS YP_049246.1 50120079 2882870 complement(1292172..1292504) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri cytochrome o ubiquinol oxidase protein CyoD or b0429 or z0532 or ecs0483 or sf0370 SWALL:CYOD_ECOLI (SWALL:P18403) (109 aa) fasta scores: E(): 5.7e-26, 67.27% id in 110 aa; cytochrome o ubiquinol oxidase subunit IV 1292504 cyoD 2882870 cyoD Pectobacterium atrosepticum SCRI1043 cytochrome o ubiquinol oxidase subunit IV YP_049246.1 1292172 R 218491 CDS YP_049247.1 50120080 2882869 complement(1292505..1293119) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri cytochrome o ubiquinol oxidase subunit iii CyoC or b0430 or c0541 or sf0371 SWALL:CYOC_ECOLI (SWALL:P18402) (204 aa) fasta scores: E(): 2.7e-67, 78.53% id in 205 aa; cytochrome o ubiquinol oxidase subunit III 1293119 cyoC 2882869 cyoC Pectobacterium atrosepticum SCRI1043 cytochrome o ubiquinol oxidase subunit III YP_049247.1 1292505 R 218491 CDS YP_049248.1 50120081 2883044 complement(1293109..1295100) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ubiquinol oxidase polypeptide I CyoB or b0431 or c0542 or z0534 or ecs0485 SWALL:CYOB_ECOLI (SWALL:P18401) (663 aa) fasta scores: E(): 0, 82.95% id in 663 aa; cytochrome O ubiquinol oxidase subunit I 1295100 cyoB 2883044 cyoB Pectobacterium atrosepticum SCRI1043 cytochrome O ubiquinol oxidase subunit I YP_049248.1 1293109 R 218491 CDS YP_049249.1 50120082 2883043 complement(1295105..1296067) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 ubiquinol oxidase polypeptide ii precursor CyoA or b0432 or c0543 SWALL:CYOA_ECOLI (SWALL:P18400) (315 aa) fasta scores: E(): 2.4e-82, 67.18% id in 320 aa; cytochrome o ubiquinol oxidase subunit II 1296067 cyoA 2883043 cyoA Pectobacterium atrosepticum SCRI1043 cytochrome o ubiquinol oxidase subunit II YP_049249.1 1295105 R 218491 CDS YP_049250.1 50120083 2884182 complement(1296492..1297979) 1 NC_004547.2 in Escherichia coli this protein is a permease involved in peptidoglycan recycling; member of major facilitator superfamily; MFS; inner membrane protein; muropeptide transporter 1297979 ampG 2884182 ampG Pectobacterium atrosepticum SCRI1043 muropeptide transporter YP_049250.1 1296492 R 218491 CDS YP_049251.1 50120084 2885728 complement(1298039..1298617) 1 NC_004547.2 Similar to Yersinia pestis lipoprotein ypo3161 or y1024 SWALL:AAM84605 (EMBL:AJ414155) (192 aa) fasta scores: E(): 7.8e-54, 80.2% id in 192 aa, and to Salmonella typhi lipoprotein sty0487 SWALL:Q8Z8V2 (EMBL:AL627266) (192 aa) fasta scores: E(): 2.3e-47, 68.75% id in 192 aa; hypothetical protein 1298617 2885728 ECA1145 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049251.1 1298039 R 218491 CDS YP_049252.1 50120085 2884101 1298919..1299233 1 NC_004547.2 positive transcriptional regulator of morphogenetic pathway; controlling several genes involved in oxidative stress, acid stress, heat shock, osmotic shock, and carbon-starvation stress; transcriptional regulator BolA 1299233 bolA 2884101 bolA Pectobacterium atrosepticum SCRI1043 transcriptional regulator BolA YP_049252.1 1298919 D 218491 CDS YP_049253.1 50120086 2884279 1299536..1300840 1 NC_004547.2 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 1300840 tig 2884279 tig Pectobacterium atrosepticum SCRI1043 trigger factor YP_049253.1 1299536 D 218491 CDS YP_049254.1 50120087 2884959 1301367..1301990 1 NC_004547.2 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 1301990 clpP 2884959 clpP Pectobacterium atrosepticum SCRI1043 ATP-dependent Clp protease proteolytic subunit YP_049254.1 1301367 D 218491 CDS YP_049255.1 50120088 2884960 1302154..1303428 1 NC_004547.2 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1303428 clpX 2884960 clpX Pectobacterium atrosepticum SCRI1043 ATP-dependent protease ATP-binding subunit ClpX YP_049255.1 1302154 D 218491 CDS YP_049256.1 50120089 2885569 1303620..1306001 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 ATP-dependent protease La Lon or CapR or Deg or Muc or LopA or b0439 or c0555 SWALL:LON_ECOLI (SWALL:P08177) (784 aa) fasta scores: E(): 0, 92.83% id in 782 aa; DNA-binding ATP-dependent protease La 1306001 lon 2885569 lon Pectobacterium atrosepticum SCRI1043 DNA-binding ATP-dependent protease La YP_049256.1 1303620 D 218491 CDS YP_049257.1 50120090 2883725 1306200..1306472 1 NC_004547.2 histone-like DNA-binding protein; transcriptional regulator HU subunit beta 1306472 hupB 2883725 hupB Pectobacterium atrosepticum SCRI1043 transcriptional regulator HU subunit beta YP_049257.1 1306200 D 218491 CDS YP_049258.1 50120091 2882727 1306869..1308749 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 peptidyl-prolyl cis-trans isomerase D PpiD or b0441 or c0557 SWALL:PPID_ECOLI (SWALL:P77241) (623 aa) fasta scores: E(): 7.8e-123, 57.5% id in 626 aa; peptidyl-prolyl cis-trans isomerase 1308749 ppiD 2882727 ppiD Pectobacterium atrosepticum SCRI1043 peptidyl-prolyl cis-trans isomerase YP_049258.1 1306869 D 218491 CDS YP_049259.1 50120092 2885759 1308888..1309253 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi DNA uptake protein and related dna-binding proteins ybav or stm0453 or sty0495 SWALL:Q8XGV0 (EMBL:AE008716) (124 aa) fasta scores: E(): 5.3e-15, 48.78% id in 123 aa, and to Escherichia coli, and Shigella flexneri hypothetical protein ybav precursor ybav or b0442 or sf0387 SWALL:AAN42043 (EMBL:AE000150) (123 aa) fasta scores: E(): 2.8e-13, 49.19% id in 124 aa; hypothetical protein 1309253 2885759 ECA1153 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049259.1 1308888 D 218491 CDS YP_049260.1 50120093 2885760 1309374..1309772 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo3151 ypo3151 SWALL:Q8ZC71 (EMBL:AJ414155) (135 aa) fasta scores: E(): 1.5e-32, 65.38% id in 130 aa, and to Yersinia pestis hypothetical protein y1033 SWALL:AAM84614 (EMBL:AE013707) (141 aa) fasta scores: E(): 1.5e-32, 65.38% id in 130 aa; thioesterase 1309772 2885760 ECA1154 Pectobacterium atrosepticum SCRI1043 thioesterase YP_049260.1 1309374 D 218491 CDS YP_049261.1 50120094 2885761 complement(1309849..1310544) 1 NC_004547.2 YbaX; catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0), as one of the early reactions of quenosine biosynthesis; quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn, Asp, Tyr, and His; queuosine biosynthesis protein QueC 1310544 2885761 ECA1155 Pectobacterium atrosepticum SCRI1043 queuosine biosynthesis protein QueC YP_049261.1 1309849 R 218491 CDS YP_049262.1 50120095 2883914 complement(1310685..1311761) 1 NC_004547.2 Similar to Yersinia pestis pyridoxal-phosphate dependent protein ypo3147 or y1037 SWALL:Q8ZC75 (EMBL:AJ414155) (346 aa) fasta scores: E(): 1.4e-117, 83.47% id in 345 aa, and to Salmonella typhimurium cysteine synthase/cystathionine beta-synthase stm0458 SWALL:Q8ZRB5 (EMBL:AE008717) (351 aa) fasta scores: E(): 1.6e-105, 76.38% id in 343 aa; pyridoxal-phosphate dependent protein 1311761 2883914 ECA1156 Pectobacterium atrosepticum SCRI1043 pyridoxal-phosphate dependent protein YP_049262.1 1310685 R 218491 CDS YP_049263.1 50120096 2883915 1312030..1312560 1 NC_004547.2 Similar to Yersinia pestis probable asnc-family regulatory protein ypo3146 or y1038 SWALL:AAM84619 (EMBL:AJ414155) (153 aa) fasta scores: E(): 1.1e-48, 80.13% id in 151 aa, and to Salmonella typhimurium, and Salmonella typhi transcriptional regulator ybao or stm0459 or sty0502 SWALL:Q8XGC9 (EMBL:AE008717) (152 aa) fasta scores: E(): 8.9e-47, 78.14% id in 151 aa; transcriptional regulator AsnC 1312560 2883915 ECA1157 Pectobacterium atrosepticum SCRI1043 transcriptional regulator AsnC YP_049263.1 1312030 D 218491 CDS YP_049264.1 50120097 2885117 1312639..1314408 1 NC_004547.2 Similar to Escherichia coli multidrug resistance-like ATP-binding protein MdlA or Mdl or b0448 SWALL:MDLA_ECOLI (SWALL:P77265) (590 aa) fasta scores: E(): 2.2e-169, 76.45% id in 582 aa; multidrug transporter membrane\ATP-binding protein 1314408 mdlA 2885117 mdlA Pectobacterium atrosepticum SCRI1043 multidrug transporter membrane\ATP-binding protein YP_049264.1 1312639 D 218491 CDS YP_049265.1 50120098 2885118 1314401..1316176 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 multidrug resistance-like ATP-binding protein mdlb mdlb or mdl or b0449 or c0566 or z0559 or ecs0503 SWALL:MDLB_ECOLI (SWALL:P75706) (593 aa) fasta scores: E(): 1e-165, 74.61% id in 583 aa; multidrug transporter membrane\ATP-binding protein 1316176 mdlB 2885118 mdlB Pectobacterium atrosepticum SCRI1043 multidrug transporter membrane\ATP-binding protein YP_049265.1 1314401 D 218491 CDS YP_049266.1 50120099 2881774 1316552..1316875 1 NC_004547.2 indirectly regulates nitrogen metabolism; at high nitrogen levels P-II 2 prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II 2 is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; functionally it is equivalent to protein P-II (GlnB), but itsexpression is driven by the presence of uridylyltransferase, nitrogen regulator I, and the absence of ammonia.; nitrogen regulatory protein P-II 2 1316875 glnK 2881774 glnK Pectobacterium atrosepticum SCRI1043 nitrogen regulatory protein P-II 2 YP_049266.1 1316552 D 218491 CDS YP_049267.1 50120100 2884177 1316909..1318201 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 probable ammonium transporter AmtB or b0451 or z0563 or ecs0505 SWALL:AMTB_ECOLI (SWALL:P37905) (428 aa) fasta scores: E(): 4.1e-125, 76.11% id in 427 aa; ammonium transporter 1318201 amtB 2884177 amtB Pectobacterium atrosepticum SCRI1043 ammonium transporter YP_049267.1 1316909 D 218491 CDS YP_049268.1 50120101 2884305 complement(1318319..1319182) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 acyl-coa thioesterase II TesB or b0452 or z0564 or ecs0506 SWALL:TESB_ECOLI (SWALL:P23911) (285 aa) fasta scores: E(): 4.3e-85, 73.75% id in 282 aa; acyl-CoA thioesterase 1319182 tesB 2884305 tesB Pectobacterium atrosepticum SCRI1043 acyl-CoA thioesterase YP_049268.1 1318319 R 218491 CDS YP_049269.1 50120102 2883916 1319395..1319976 1 NC_004547.2 Similar to Salmonella typhimurium glycoprotein/polysaccharide metabolism ybay or stm0465 SWALL:Q8ZRB1 (EMBL:AE008717) (189 aa) fasta scores: E(): 4e-30, 50.78% id in 191 aa, and to Salmonella typhi hypothetical lipoprotein Sty0509 sty0509 SWALL:Q8Z8U2 (EMBL:AL627266) (189 aa) fasta scores: E(): 6.1e-30, 50.26% id in 189 aa; lipoprotein 1319976 2883916 ECA1163 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_049269.1 1319395 D 218491 CDS YP_049270.1 50120103 2883896 complement(1319996..1320316) 1 NC_004547.2 Similar to Yersinia pestis 6-O-methylguanine DNA methyltransferase family protein ypo3139 or y1045 SWALL:Q8ZC83 (EMBL:AJ414155) (181 aa) fasta scores: E(): 3.1e-26, 72% id in 100 aa, and to Escherichia coli, and Shigella flexneri hypothetical protein ybaz ybaz or b0454 or sf0400 SWALL:YBAZ_ECOLI (SWALL:P75707) (129 aa) fasta scores: E(): 4.7e-24, 65.68% id in 102 aa; 6-O-methylguanine DNA methyltransferase 1320316 2883896 ECA1164 Pectobacterium atrosepticum SCRI1043 6-O-methylguanine DNA methyltransferase YP_049270.1 1319996 R 218491 CDS YP_049271.1 50120104 2882542 complement(1321060..1321263) 1 NC_004547.2 with Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; hemolysin expression-modulating protein 1321263 hha 2882542 hha Pectobacterium atrosepticum SCRI1043 hemolysin expression-modulating protein YP_049271.1 1321060 R 218491 CDS YP_049272.1 50120105 2883897 complement(1321317..1321685) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3137 or y1047 SWALL:Q8ZC84 (EMBL:AJ414155) (122 aa) fasta scores: E(): 8.8e-36, 74.59% id in 122 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein ybaj or b0461 or c0579 or z0574 or ecs0514 SWALL:YBAJ_ECOLI (SWALL:P37611) (124 aa) fasta scores: E(): 1.4e-26, 60.83% id in 120 aa; hypothetical protein 1321685 2883897 ECA1166 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049272.1 1321317 R 218491 CDS YP_049273.1 50120106 2884493 complement(1322284..1322427) 1 NC_004547.2 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; 50S ribosomal protein L36 1322427 rpmJ 2884493 rpmJ Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L36 YP_049273.1 1322284 R 218491 CDS YP_049274.1 50120107 2884495 complement(1322445..1322693) 1 NC_004547.2 RpmE2; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 1322693 rpmE2 2884495 rpmE2 Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L31 YP_049274.1 1322445 R 218491 CDS YP_049275.1 50120108 2884692 complement(1322899..1326027) 1 NC_004547.2 Similar to Escherichia coli acriflavine resistance protein B AcrB or AcrE or b0462 SWALL:ACRB_ECOLI (SWALL:P31224) (1049 aa) fasta scores: E(): 0, 80.84% id in 1039 aa; acriflavin resistance protein B 1326027 acrB 2884692 acrB Pectobacterium atrosepticum SCRI1043 acriflavin resistance protein B YP_049275.1 1322899 R 218491 CDS YP_049276.1 50120109 2884691 complement(1326056..1327249) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 acriflavine resistance protein a precursor AcrA or MtcA or Lir or b0463 or z0578 or ecs0516 SWALL:ACRA_ECOLI (SWALL:P31223) (397 aa) fasta scores: E(): 4e-103, 72.29% id in 397 aa; acriflavine resistance protein A 1327249 acrA 2884691 acrA Pectobacterium atrosepticum SCRI1043 acriflavine resistance protein A YP_049276.1 1326056 R 218491 CDS YP_049277.1 50120110 2883936 1327415..1328056 1 NC_004547.2 regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine; DNA-binding transcriptional repressor AcrR 1328056 acrR 2883936 acrR Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional repressor AcrR YP_049277.1 1327415 D 218491 CDS YP_049278.1 50120111 2883898 complement(1328111..1328281) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo3128 SWALL:Q8ZC92 (EMBL:AJ414155) (51 aa) fasta scores: E(): 2e-09, 60.78% id in 51 aa, and to Escherichia coli O6 hypothetical protein ybam or c0585 SWALL:AAN79063 (EMBL:AE016756) (53 aa) fasta scores: E(): 6e-09, 62.26% id in 53 aa; hypothetical protein 1328281 2883898 ECA1172 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049278.1 1328111 R 218491 CDS YP_049279.1 50120112 2882326 complement(1328319..1328855) 1 NC_004547.2 Similar to Escherichia coli primosomal replication protein N'' PriC or b0467 SWALL:PRIC_ECOLI (SWALL:P23862) (174 aa) fasta scores: E(): 1.2e-14, 40.11% id in 172 aa; primosomal replication protein N'' 1328855 priC 2882326 priC Pectobacterium atrosepticum SCRI1043 primosomal replication protein N'' YP_049279.1 1328319 R 218491 CDS YP_049280.1 50120113 2883899 1329039..1329440 1 NC_004547.2 Similar to Yersinia pestis gene 58 y1058 SWALL:AAM84639 (EMBL:AE013709) (126 aa) fasta scores: E(): 6.6e-40, 77.23% id in 123 aa, and to Salmonella typhimurium, and Salmonella typhi phage gene 58 yban or stm0482 or sty0526 SWALL:Q8XGD2 (EMBL:AE008718) (125 aa) fasta scores: E(): 3.2e-38, 73.17% id in 123 aa; hypothetical protein 1329440 2883899 ECA1174 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049280.1 1329039 D 218491 CDS YP_049281.1 50120114 2884163 1329655..1330212 1 NC_004547.2 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1330212 apt 2884163 apt Pectobacterium atrosepticum SCRI1043 adenine phosphoribosyltransferase YP_049281.1 1329655 D 218491 CDS YP_049282.1 50120115 2882283 1330287..1332362 1 NC_004547.2 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 1332362 dnaX 2882283 dnaX Pectobacterium atrosepticum SCRI1043 DNA polymerase III subunits gamma and tau YP_049282.1 1330287 D 218491 CDS YP_049283.1 50120116 2883872 1332403..1332732 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, Salmonella typhimurium, Salmonella typhi, and Shigella flexneri hypothetical protein ybab SWALL:YBAB_ECOLI (SWALL:P17577) (109 aa) fasta scores: E(): 5.8e-35, 91.74% id in 109 aa, and to Yersinia pestis hypothetical protein ypo3121/y1061 ypo3121 or y1061 SWALL:YV21_YERPE (SWALL:Q8ZC96) (110 aa) fasta scores: E(): 4.2e-34, 92.72% id in 110 aa; hypothetical protein 1332732 2883872 ECA1177 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049283.1 1332403 D 218491 CDS YP_049284.1 50120117 2885276 1332732..1333337 1 NC_004547.2 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1333337 recR 2885276 recR Pectobacterium atrosepticum SCRI1043 recombination protein RecR YP_049284.1 1332732 D 218491 CDS YP_049285.1 50120118 2883838 1333507..1335396 1 NC_004547.2 molecular chaperone; heat shock protein 90 1335396 htpG 2883838 htpG Pectobacterium atrosepticum SCRI1043 heat shock protein 90 YP_049285.1 1333507 D 218491 CDS YP_049286.1 50120119 2883812 1335658..1336302 1 NC_004547.2 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1336302 adk 2883812 adk Pectobacterium atrosepticum SCRI1043 adenylate kinase YP_049286.1 1335658 D 218491 CDS YP_049287.1 50120120 2882905 1336525..1337487 1 NC_004547.2 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 1337487 hemH 2882905 hemH Pectobacterium atrosepticum SCRI1043 ferrochelatase YP_049287.1 1336525 D 218491 CDS YP_049288.1 50120121 2883873 complement(1337606..1339291) 1 NC_004547.2 YbaL; member of the CPA-2 family of antiporters; uncharacterized protein; cation:proton antiport protein 1339291 2883873 ECA1182 Pectobacterium atrosepticum SCRI1043 cation:proton antiport protein YP_049288.1 1337606 R 218491 CDS YP_049289.1 50120122 2883874 1339634..1339852 1 NC_004547.2 Doubtful CDS. No significant database matches; hypothetical protein 1339852 2883874 ECA1183 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049289.1 1339634 D 218491 CDS YP_049290.1 50120123 2882962 1339959..1341608 1 NC_004547.2 catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic 1341608 ushA 2882962 ushA Pectobacterium atrosepticum SCRI1043 bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic YP_049290.1 1339959 D 218491 CDS YP_049291.1 50120124 2883849 1341797..1343851 1 NC_004547.2 no significant database matches; hypothetical protein 1343851 2883849 ECA1185 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049291.1 1341797 D 218491 CDS YP_049292.1 50120125 2883850 1343981..1346041 1 NC_004547.2 no significant database matches; hypothetical protein 1346041 2883850 ECA1186 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049292.1 1343981 D 218491 CDS YP_049293.1 50120126 2883851 1346334..1348487 1 NC_004547.2 Similar to Escherichia coli O157:H7 carbon starvation protein yjiy or z5953 or ecs5313 SWALL:Q8XB65 (EMBL:AE005666) (721 aa) fasta scores: E(): 0, 87.44% id in 717 aa, and to Shigella flexneri carbon starvation protein yjiy or sf4372 SWALL:AAN45788 (EMBL:AE015443) (721 aa) fasta scores: E(): 0, 87.44% id in 717 aa; carbon starvation protein 1348487 2883851 ECA1187 Pectobacterium atrosepticum SCRI1043 carbon starvation protein YP_049293.1 1346334 D 218491 CDS YP_049294.1 50120127 2883815 1348630..1348836 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein yjix or b4353 or c5428 or z5952 or ecs5312 or sf4371 SWALL:YJIX_ECOLI (SWALL:P39395) (67 aa) fasta scores: E(): 4.2e-23, 83.58% id in 67 aa, and to Salmonella typhimurium, and Salmonella typhi cytoplasmic protein yjix or stm4531 or sty4889 SWALL:Q8XF65 (EMBL:AE008913) (67 aa) fasta scores: E(): 1.1e-22, 83.58% id in 67 aa; hypothetical protein 1348836 2883815 ECA1188 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049294.1 1348630 D 218491 CDS YP_049295.1 50120128 2883816 1348853..1349839 1 NC_004547.2 Similar to Escherichia coli hypothetical protein yjia or b4352 SWALL:YJIA_ECOLI (SWALL:P24203) (318 aa) fasta scores: E(): 1e-81, 67.93% id in 315 aa, and to Salmonella typhimurium cobalamin synthesis protein yjia or stm4530 SWALL:Q8ZJY6 (EMBL:AE008913) (318 aa) fasta scores: E(): 3.6e-81, 68.88% id in 315 aa; GTP-binding protein YjiA 1349839 2883816 ECA1189 Pectobacterium atrosepticum SCRI1043 GTP-binding protein YjiA YP_049295.1 1348853 D 218491 CDS YP_049296.1 50120129 2881647 1350115..1351497 1 NC_004547.2 Similar to Erwinia chrysanthemi polygalacturonase precursor PehN SWALL:Q8KKH7 (EMBL:AJ292044) (457 aa) fasta scores: E(): 9.4e-151, 80.13% id in 458 aa; polygalacturonase 1351497 pehN 2881647 pehN Pectobacterium atrosepticum SCRI1043 polygalacturonase YP_049296.1 1350115 D 218491 CDS YP_049297.1 50120130 2883817 complement(1351949..1352428) 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty0541 SWALL:Q8Z8S7 (EMBL:AL627267) (159 aa) fasta scores: E(): 2.5e-43, 75.47% id in 159 aa, and to Escherichia coli O6 protein ybak or c0601 SWALL:AAN79079 (EMBL:AE016756) (159 aa) fasta scores: E(): 3e-42, 72.95% id in 159 aa; hypothetical protein 1352428 2883817 ECA1191 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049297.1 1351949 R 218491 CDS YP_049298.1 50120131 2883744 complement(1352499..1353317) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3087 or y1091 SWALL:AAM84669 (EMBL:AJ414155) (269 aa) fasta scores: E(): 1.1e-62, 62.87% id in 264 aa, and to Escherichia coli O6 hypothetical protein ybap or c0602 SWALL:AAN79080 (EMBL:AE016756) (264 aa) fasta scores: E(): 6.8e-51, 52.49% id in 261 aa; hypothetical protein 1353317 2883744 ECA1192 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049298.1 1352499 R 218491 CDS YP_049299.1 50120132 2884949 complement(1353473..1356196) 1 NC_004547.2 Similar to Escherichia coli copper-transporting P-type ATPase CopA or b0484 SWALL:ATCU_ECOLI (SWALL:Q59385) (833 aa) fasta scores: E(): 4.8e-208, 71.37% id in 835 aa; copper exporting ATPase 1356196 copA 2884949 copA Pectobacterium atrosepticum SCRI1043 copper exporting ATPase YP_049299.1 1353473 R 218491 CDS YP_049300.1 50120133 2883775 1356312..1356722 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri transcriptional regulator CueR or b0487 or sf0432 SWALL:CUER_ECOLI (SWALL:P77565) (135 aa) fasta scores: E(): 8.4e-34, 72.51% id in 131 aa; copper efflux regulator 1356722 cueR 2883775 cueR Pectobacterium atrosepticum SCRI1043 copper efflux regulator YP_049300.1 1356312 D 218491 CDS YP_049301.1 50120134 2883745 complement(1356757..1357212) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo3084 or y1095 SWALL:Q8ZCA9 (EMBL:AJ414155) (149 aa) fasta scores: E(): 2.4e-35, 60% id in 150 aa, and to Escherichia coli, and Shigella flexneri hypothetical protein ybbj or b0488 or sf0433 SWALL:YBBJ_ECOLI (SWALL:P75709) (151 aa) fasta scores: E(): 2e-34, 59.73% id in 149 aa; hypothetical protein 1357212 2883745 ECA1195 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049301.1 1356757 R 218491 CDS YP_049302.1 50120135 2883746 complement(1357212..1358126) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3083 or y1096 SWALL:Q8ZCB0 (EMBL:AJ414155) (304 aa) fasta scores: E(): 3.7e-94, 90.13% id in 304 aa, and to Salmonella typhimurium inner membrane protein ybbk or stm0501 SWALL:Q8ZR94 (EMBL:AE008719) (305 aa) fasta scores: E(): 2.8e-90, 86.09% id in 302 aa; hypothetical protein 1358126 2883746 ECA1196 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049302.1 1357212 R 218491 CDS YP_049303.1 50120136 2883719 complement(1358390..1358650) 1 NC_004547.2 plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor, essential for nucleotide reduction catalyzed by ribonucleotide reductases; 2Fe-2S ferredoxin 1358650 2883719 ECA1197 Pectobacterium atrosepticum SCRI1043 2Fe-2S ferredoxin YP_049303.1 1358390 R 218491 CDS YP_049304.1 50120137 2881660 complement(1358654..1359784) 1 NC_004547.2 B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; ribonucleotide-diphosphate reductase subunit beta 1359784 nrdB 2881660 nrdB Pectobacterium atrosepticum SCRI1043 ribonucleotide-diphosphate reductase subunit beta YP_049304.1 1358654 R 218491 CDS YP_049305.1 50120138 2881659 complement(1359896..1362181) 1 NC_004547.2 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1362181 nrdA 2881659 nrdA Pectobacterium atrosepticum SCRI1043 ribonucleotide-diphosphate reductase subunit alpha YP_049305.1 1359896 R 218491 CDS YP_049306.1 50120139 2884210 complement(1362525..1363250) 1 NC_004547.2 Involved in ubiquinone biosynthesis; 3-demethylubiquinone-9 3-methyltransferase 1363250 ubiG 2884210 ubiG Pectobacterium atrosepticum SCRI1043 3-demethylubiquinone-9 3-methyltransferase YP_049306.1 1362525 R 218491 CDS YP_049307.1 50120140 2883509 1363499..1366138 1 NC_004547.2 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 1366138 gyrA 2883509 gyrA Pectobacterium atrosepticum SCRI1043 DNA gyrase subunit A YP_049307.1 1363499 D 218491 CDS YP_049308.1 50120141 2884513 1366254..1369109 1 NC_004547.2 Similar to Escherichia coli sensor protein RcsC or b2218 SWALL:RCSC_ECOLI (SWALL:P14376) (949 aa) fasta scores: E(): 1.6e-216, 58.97% id in 953 aa; hybrid sensory kinase in two-component regulatory system with RcsB and YojN 1369109 rcsC 2884513 rcsC Pectobacterium atrosepticum SCRI1043 hybrid sensory kinase in two-component regulatory system with RcsB and YojN YP_049308.1 1366254 D 218491 CDS YP_049309.1 50120142 2884512 complement(1369147..1369791) 1 NC_004547.2 two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division; probably phosphorylated by RcsC or RcsF; transcriptional regulator RcsB 1369791 rcsB 2884512 rcsB Pectobacterium atrosepticum SCRI1043 transcriptional regulator RcsB YP_049309.1 1369147 R 218491 CDS YP_049310.1 50120143 2883720 complement(1369800..1372484) 1 NC_004547.2 Similar to Salmonella typhimurium sensor/kinase in regulatory system yojn or stm2269 SWALL:Q8ZNH2 (EMBL:AE008801) (889 aa) fasta scores: E(): 2.3e-141, 45.11% id in 891 aa; phosphotransfer intermediate protein in two-component regulatory system with RcsBC 1372484 2883720 ECA1204 Pectobacterium atrosepticum SCRI1043 phosphotransfer intermediate protein in two-component regulatory system with RcsBC YP_049310.1 1369800 R 218491 CDS YP_049311.1 50120144 2883721 complement(1372498..1373667) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo1221 or y2967 SWALL:Q8ZGR2 (EMBL:AJ414147) (384 aa) fasta scores: E(): 1.1e-95, 69.16% id in 373 aa, and to Bradyrhizobium japonicum Blr6253 protein blr6253 SWALL:BAC51518 (EMBL:AP005957) (436 aa) fasta scores: E(): 8.5e-59, 47.76% id in 381 aa; hypothetical protein 1373667 2883721 ECA1205 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049311.1 1372498 R 218491 CDS YP_049312.1 50120145 2883722 complement(1373804..1374223) 1 NC_004547.2 Similar to Agrobacterium tumefaciens hypothetical protein atu0863 atu0863 or agr_c_1578 SWALL:Q8UH22 (EMBL:AE009052) (143 aa) fasta scores: E(): 7e-27, 61.11% id in 126 aa, and to Bradyrhizobium japonicum transcriptional regulatory protein bll5105 SWALL:BAC50370 (EMBL:AP005953) (140 aa) fasta scores: E(): 9.7e-16, 50.47% id in 105 aa; transcriptional regulator 1374223 2883722 ECA1206 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_049312.1 1373804 R 218491 CDS YP_049313.1 50120146 2883700 1374601..1375371 1 NC_004547.2 Similar to Rhizobium meliloti sdr family dehydrogenase protein rb0962 or smb21384 SWALL:Q92UX3 (EMBL:AL603645) (247 aa) fasta scores: E(): 3e-56, 64.75% id in 244 aa, and to Agrobacterium tumefaciens oxidoreductase atu0864 or agr_c_1580 SWALL:Q8UH21 (EMBL:AE009052) (252 aa) fasta scores: E(): 2.7e-38, 48.38% id in 248 aa; short chain dehydrogenase 1375371 2883700 ECA1207 Pectobacterium atrosepticum SCRI1043 short chain dehydrogenase YP_049313.1 1374601 D 218491 CDS YP_049314.1 50120147 2883701 1375437..1376318 1 NC_004547.2 Similar to Rhizobium meliloti sdr family dehydrogenase protein rb0961 or smb21383 SWALL:Q92UX4 (EMBL:AL603645) (296 aa) fasta scores: E(): 7.1e-51, 57.04% id in 291 aa, and to Xanthomonas axonopodis short chain dehydrogenase xac0083 SWALL:Q8PR80 (EMBL:AE011631) (245 aa) fasta scores: E(): 1.4e-40, 55.83% id in 240 aa; short chain dehydrogenase 1376318 2883701 ECA1208 Pectobacterium atrosepticum SCRI1043 short chain dehydrogenase YP_049314.1 1375437 D 218491 CDS YP_049315.1 50120148 2883702 1376426..1377313 1 NC_004547.2 Similar to Rhizobium meliloti sdr family dehydrogenase protein rb0961 or smb21383 SWALL:Q92UX4 (EMBL:AL603645) (296 aa) fasta scores: E(): 1e-56, 60.87% id in 299 aa, and to Xanthomonas axonopodis short chain dehydrogenase xac0083 SWALL:Q8PR80 (EMBL:AE011631) (245 aa) fasta scores: E(): 2.6e-45, 57.5% id in 240 aa; short chain dehydrogenase 1377313 2883702 ECA1209 Pectobacterium atrosepticum SCRI1043 short chain dehydrogenase YP_049315.1 1376426 D 218491 CDS YP_049316.1 50120149 2884544 1377747..1379069 1 NC_004547.2 synthesizes isochorismate acid from chorismate; menaquinone-specific isochorismate synthase 1379069 menF 2884544 menF Pectobacterium atrosepticum SCRI1043 menaquinone-specific isochorismate synthase YP_049316.1 1377747 D 218491 CDS YP_049317.1 50120150 2884542 1379359..1381041 1 NC_004547.2 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 1381041 menD 2884542 menD Pectobacterium atrosepticum SCRI1043 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase YP_049317.1 1379359 D 218491 CDS YP_049318.1 50120151 2883290 1381068..1381829 1 NC_004547.2 catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA; acyl-CoA thioester hydrolase 1381829 2883290 ECA1212 Pectobacterium atrosepticum SCRI1043 acyl-CoA thioester hydrolase YP_049318.1 1381068 D 218491 CDS YP_049319.1 50120152 2884911 1381835..1382692 1 NC_004547.2 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; naphthoate synthase 1382692 menB 2884911 menB Pectobacterium atrosepticum SCRI1043 naphthoate synthase YP_049319.1 1381835 D 218491 CDS YP_049320.1 50120153 2884912 1382692..1383663 1 NC_004547.2 catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; O-succinylbenzoate synthase 1383663 menC 2884912 menC Pectobacterium atrosepticum SCRI1043 O-succinylbenzoate synthase YP_049320.1 1382692 D 218491 CDS YP_049321.1 50120154 2884543 1383651..1385081 1 NC_004547.2 Similar to Escherichia coli O-succinylbenzoic acid--CoA ligase MenE or b2260 SWALL:MENE_ECOLI (SWALL:P37353) (451 aa) fasta scores: E(): 1.5e-76, 53.43% id in 466 aa; O-succinylbenzoic acid--CoA ligase 1385081 menE 2884543 menE Pectobacterium atrosepticum SCRI1043 O-succinylbenzoic acid--CoA ligase YP_049321.1 1383651 D 218491 CDS YP_049322.1 50120155 2885366 complement(1385223..>1385450) 1 NC_004547.2 Partial CDS. Similar to the N-terminal regions of several catalases including Proteus mirabilis catalase KatA SWALL:CATA_PROMI (SWALL:P42321) (484 aa) fasta scores: E(): 0.072, 40.38% id in 52 aa, and to Yersinia pestis catalase KatA or ypo1207 or KatE or y2981 SWALL:Q8ZGS4 (EMBL:AJ414147) (480 aa) fasta scores: E(): 0.013, 42.3% id in 52 aa; catalase (partial) >1385450 katA 2885366 katA Pectobacterium atrosepticum SCRI1043 catalase (partial) YP_049322.1 1385223 R 218491 CDS YP_049323.1 50120156 2883291 1385671..1386210 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein y2980 SWALL:Q8D012 (EMBL:AE013899) (180 aa) fasta scores: E(): 9.3e-31, 47.77% id in 180 aa, and to Escherichia coli hypothetical protein yfaz precursor yfaz or b2250 SWALL:YFAZ_ECOLI (SWALL:P76471) (180 aa) fasta scores: E(): 4.1e-29, 46.11% id in 180 aa; hypothetical protein 1386210 2883291 ECA1217 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049323.1 1385671 D 218491 CDS YP_049324.1 50120157 2884219 complement(1386405..1387613) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri tyrosine-specific transport protein TyrP or b1907 or sf1953 SWALL:TYRP_ECOLI (SWALL:P18199) (403 aa) fasta scores: E(): 3.6e-112, 73.13% id in 402 aa; tyrosine-specific transport protein 1387613 tyrP 2884219 tyrP Pectobacterium atrosepticum SCRI1043 tyrosine-specific transport protein YP_049324.1 1386405 R 218491 CDS YP_049325.1 50120158 2883292 1387959..1389152 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1210 or y2978 SWALL:AAM86529 (EMBL:AJ414147) (397 aa) fasta scores: E(): 2.8e-102, 67.83% id in 398 aa, and to Escherichia coli O6 cina-like protein c2791 SWALL:AAN81245 (EMBL:AE016763) (400 aa) fasta scores: E(): 1.5e-95, 63.5% id in 400 aa; competence damage-inducible protein A 1389152 2883292 ECA1219 Pectobacterium atrosepticum SCRI1043 competence damage-inducible protein A YP_049325.1 1387959 D 218491 CDS YP_049326.1 50120159 2883153 complement(1389664..1390524) 1 NC_004547.2 Similar to Yersinia pestis thioredoxin ypo3082 or y1097 SWALL:Q8ZCB1 (EMBL:AJ414155) (289 aa) fasta scores: E(): 1e-69, 71.93% id in 285 aa, and to Escherichia coli hypothetical protein ybbn or b0492 SWALL:YBBN_ECOLI (SWALL:P77395) (284 aa) fasta scores: E(): 3.8e-68, 70.96% id in 279 aa; thioredoxin 1390524 2883153 ECA1220 Pectobacterium atrosepticum SCRI1043 thioredoxin YP_049326.1 1389664 R 218491 CDS YP_049327.1 50120160 2883154 complement(1390635..1391405) 1 NC_004547.2 Similar to Yersinia pestis probable short-chain dehydrogenase ypo3081 or y1098 SWALL:Q8ZCB2 (EMBL:AJ414155) (258 aa) fasta scores: E(): 5.7e-78, 81.64% id in 256 aa, and to Salmonella typhimurium, and Salmonella typhi oxidoreductase ybbo or stm0505 or sty0551 SWALL:Q8XGS4 (EMBL:AE008719) (256 aa) fasta scores: E(): 2.2e-67, 68.23% id in 255 aa; short chain dehydrogenase 1391405 2883154 ECA1221 Pectobacterium atrosepticum SCRI1043 short chain dehydrogenase YP_049327.1 1390635 R 218491 CDS YP_049328.1 50120161 2884304 complement(1391434..1392117) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 acyl-CoA thioesterase I precursor TesA or ApeA or PldC or b0494 or c0615 SWALL:TESA_ECOLI (SWALL:P29679) (208 aa) fasta scores: E(): 7e-57, 67.4% id in 227 aa; multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 1392117 tesA 2884304 tesA Pectobacterium atrosepticum SCRI1043 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 YP_049328.1 1391434 R 218491 CDS YP_049329.1 50120162 2883155 1392238..1392771 1 NC_004547.2 Similar to Yersinia pestis ABC transporter ATP-binding protein ypo3079 or y1100 SWALL:Q8ZCB4 (EMBL:AJ414155) (228 aa) fasta scores: E(): 1.2e-52, 81.35% id in 177 aa, and to Salmonella typhimurium, and Salmonella typhi ABC superfamily ybba or stm0507 or sty0553 SWALL:Q8XFS8 (EMBL:AE008719) (228 aa) fasta scores: E(): 3.2e-49, 76.27% id in 177 aa; ABC transporter ATP-binding protein 1392771 2883155 ECA1223 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_049329.1 1392238 D 218491 CDS YP_049330.1 50120163 2883143 1392768..1395197 1 NC_004547.2 Similar to Yersinia pestis permease ypo3078 SWALL:Q8ZCB5 (EMBL:AJ414155) (809 aa) fasta scores: E(): 0, 75.24% id in 808 aa, and to Escherichia coli hypothetical protein ybbp or b0496 SWALL:YBBP_ECOLI (SWALL:P77504) (804 aa) fasta scores: E(): 0, 69.87% id in 810 aa; hypothetical protein 1395197 2883143 ECA1224 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049330.1 1392768 D 218491 CDS YP_049331.1 50120164 2883551 1395770..1396903 1 NC_004547.2 involved in hydrogen uptake; hydrogenase 2 small subunit 1396903 hybO 2883551 hybO Pectobacterium atrosepticum SCRI1043 hydrogenase 2 small subunit YP_049331.1 1395770 D 218491 CDS YP_049332.1 50120165 2883684 1396907..1397917 1 NC_004547.2 Fe-S ferrodoxin type component; participates in the periplasmic electron-transferring activity of hydrogenase 2; hydrogenase 2 protein HybA 1397917 hybA 2883684 hybA Pectobacterium atrosepticum SCRI1043 hydrogenase 2 protein HybA YP_049332.1 1396907 D 218491 CDS YP_049333.1 50120166 2883685 1397910..1399103 1 NC_004547.2 HybB; cytochrome b subunit of the hydrogenase 2 enzyme, composed of HybA, B, C, and O subunits; hydrogenase 2 b cytochrome subunit 1399103 hybB 2883685 hybB Pectobacterium atrosepticum SCRI1043 hydrogenase 2 b cytochrome subunit YP_049333.1 1397910 D 218491 CDS YP_049334.1 50120167 2883686 1399081..1400775 1 NC_004547.2 involved in hydrogen uptake; hydrogenase 2 large subunit 1400775 hybC 2883686 hybC Pectobacterium atrosepticum SCRI1043 hydrogenase 2 large subunit YP_049334.1 1399081 D 218491 CDS YP_049335.2 229220653 2883549 1400775..1401275 1 NC_004547.2 protease responsible for the cleavage of a 15 amino acid peptide from the C-terminal end of the large subunit of hydrogenase 2 (HybC); hydrogenase 2 maturation endopeptidase 1401275 hybD 2883549 hybD Pectobacterium atrosepticum SCRI1043 hydrogenase 2 maturation endopeptidase YP_049335.2 1400775 D 218491 CDS YP_049336.1 50120169 2883550 1401259..1401732 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 hydrogenase-2 operon protein HybE or b2992 or c3729 SWALL:HYBE_ECOLI (SWALL:P37183) (162 aa) fasta scores: E(): 1.3e-27, 48.05% id in 154 aa; hydrogenase 2-specific chaperone 1401732 hybE 2883550 hybE Pectobacterium atrosepticum SCRI1043 hydrogenase 2-specific chaperone YP_049336.1 1401259 D 218491 CDS YP_049337.1 50120170 2883015 complement(1401792..1402802) 1 NC_004547.2 Similar to Escherichia coli hydrogenase isoenzymes formation protein HypE or b2730 SWALL:HYPE_ECOLI (SWALL:P24193) (322 aa) fasta scores: E(): 1.7e-97, 78.88% id in 322 aa; hydrogenase isoenzyme formation protein 1402802 hypE 2883015 hypE Pectobacterium atrosepticum SCRI1043 hydrogenase isoenzyme formation protein YP_049337.1 1401792 R 218491 CDS YP_049338.1 50120171 2883014 complement(1402802..1403920) 1 NC_004547.2 Similar to Escherichia coli hydrogenase isoenzymes formation protein HypD or b2729 SWALL:HYPD_ECOLI (SWALL:P24192) (373 aa) fasta scores: E(): 2.4e-119, 76.55% id in 371 aa; hydrogenase isoenzyme formation protein 1403920 hypD 2883014 hypD Pectobacterium atrosepticum SCRI1043 hydrogenase isoenzyme formation protein YP_049338.1 1402802 R 218491 CDS YP_049339.1 50120172 2883023 complement(1403920..1404198) 1 NC_004547.2 HypC; accessory protein necessary for maturation of the hydrogenase isoforms 1, 2 and 3; forms a complex with HypD, HypE, and HypF proteins, which is the site of ligand biosynthesis and attachment to the iron atom of the NiFe site in the hydrogenase; hydrogenase assembly chaperone 1404198 hypC 2883023 hypC Pectobacterium atrosepticum SCRI1043 hydrogenase assembly chaperone YP_049339.1 1403920 R 218491 CDS YP_049340.1 50120173 2883022 complement(1404189..1405064) 1 NC_004547.2 GTP hydrolase involved in nickel liganding into hydrogenases; hydrogenase nickel incorporation protein HypB 1405064 hypB 2883022 hypB Pectobacterium atrosepticum SCRI1043 hydrogenase nickel incorporation protein HypB YP_049340.1 1404189 R 218491 CDS YP_049341.1 50120174 2883021 complement(1405066..1405419) 1 NC_004547.2 plays a role in hydrogenase nickel cofactor insertion; hydrogenase nickel incorporation protein 1405419 hypA 2883021 hypA Pectobacterium atrosepticum SCRI1043 hydrogenase nickel incorporation protein YP_049341.1 1405066 R 218491 CDS YP_049342.1 50120175 2883020 1406110..1408089 1 NC_004547.2 Similar to Escherichia coli hydrogenase-4 transcriptional activator HyfR or b2491 SWALL:HYFR_ECOLI (SWALL:P71229) (670 aa) fasta scores: E(): 2e-110, 50.07% id in 655 aa; hydrogenase-4 transcriptional activator 1408089 hyfR 2883020 hyfR Pectobacterium atrosepticum SCRI1043 hydrogenase-4 transcriptional activator YP_049342.1 1406110 D 218491 CDS YP_049343.1 50120176 2883422 complement(1408141..1408623) 1 NC_004547.2 involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE; hydrogenase 3 maturation protease 1408623 hycI 2883422 hycI Pectobacterium atrosepticum SCRI1043 hydrogenase 3 maturation protease YP_049343.1 1408141 R 218491 CDS YP_049344.1 50120177 2883282 complement(1408628..1409050) 1 NC_004547.2 Similar to Escherichia coli hydrogenase-4 component J HyfJ or b2490 SWALL:HYFJ_ECOLI (SWALL:P77453) (137 aa) fasta scores: E(): 2.4e-23, 50% id in 136 aa; hydrogenase-4 subunit J 1409050 hyfJ 2883282 hyfJ Pectobacterium atrosepticum SCRI1043 hydrogenase-4 subunit J YP_049344.1 1408628 R 218491 CDS YP_049345.1 50120178 2883281 complement(1409043..1409822) 1 NC_004547.2 Similar to Escherichia coli hydrogenase-4 component I HyfI or b2489 SWALL:HYFI_ECOLI (SWALL:P77668) (252 aa) fasta scores: E(): 5.7e-68, 72.06% id in 247 aa; hydrogenase-4 subunit I 1409822 hyfI 2883281 hyfI Pectobacterium atrosepticum SCRI1043 hydrogenase-4 subunit I YP_049345.1 1409043 R 218491 CDS YP_049346.1 50120179 2883280 complement(1409819..1410370) 1 NC_004547.2 probable electron transfer protein for hydrogenase 4; hydrogenase 4 is believed to be silent in E. coli under conditions tested so far; hydrogenase 4 subunit H 1410370 hyfH 2883280 hyfH Pectobacterium atrosepticum SCRI1043 hydrogenase 4 subunit H YP_049346.1 1409819 R 218491 CDS YP_049347.1 50120180 2883301 complement(1410378..1412114) 1 NC_004547.2 Similar to Escherichia coli hydrogenase-4 component G HyfG or b2487 SWALL:HYFG_ECOLI (SWALL:P77329) (555 aa) fasta scores: E(): 3.1e-128, 78.03% id in 569 aa; hydrogenase-4 subunit G 1412114 hyfG 2883301 hyfG Pectobacterium atrosepticum SCRI1043 hydrogenase-4 subunit G YP_049347.1 1410378 R 218491 CDS YP_049348.1 50120181 2883300 complement(1412101..1413714) 1 NC_004547.2 Catalyzes the transfer of electrons from NADH to ubiquinone; hydrogenase 4 subunit F 1413714 hyfF 2883300 hyfF Pectobacterium atrosepticum SCRI1043 hydrogenase 4 subunit F YP_049348.1 1412101 R 218491 CDS YP_049349.1 50120182 2883299 complement(1413719..1414369) 1 NC_004547.2 interacts with formate dehydrogenase to produce an active formate hydrogenlyase complex which cleaves formate to dihydrogen and carbon dioxide; hydrogenase 4 membrane subunit 1414369 hyfE 2883299 hyfE Pectobacterium atrosepticum SCRI1043 hydrogenase 4 membrane subunit YP_049349.1 1413719 R 218491 CDS YP_049350.1 50120183 2883392 complement(1414382..1415842) 1 NC_004547.2 Similar to Escherichia coli hydrogenase-4 component D HyfD or b2484 SWALL:HYFD_ECOLI (SWALL:P77416) (479 aa) fasta scores: E(): 1.2e-133, 72.65% id in 479 aa; hydrogenase 4 subunit D 1415842 hyfD 2883392 hyfD Pectobacterium atrosepticum SCRI1043 hydrogenase 4 subunit D YP_049350.1 1414382 R 218491 CDS YP_049351.1 50120184 2883391 complement(1415858..1416808) 1 NC_004547.2 Similar to Escherichia coli hydrogenase-4 component C HyfC or b2483 SWALL:HYFC_ECOLI (SWALL:P77858) (315 aa) fasta scores: E(): 4.9e-85, 73.35% id in 304 aa; hydrogenase-4 subunit C 1416808 hyfC 2883391 hyfC Pectobacterium atrosepticum SCRI1043 hydrogenase-4 subunit C YP_049351.1 1415858 R 218491 CDS YP_049352.1 50120185 2883390 complement(1416819..1418834) 1 NC_004547.2 Catalyzes the transfer of electrons from NADH to ubiquinone; hydrogenase 4 subunit B 1418834 hyfB 2883390 hyfB Pectobacterium atrosepticum SCRI1043 hydrogenase 4 subunit B YP_049352.1 1416819 R 218491 CDS YP_049353.1 50120186 2883424 complement(1418837..1419457) 1 NC_004547.2 Similar to Escherichia coli hydrogenase-4 component A HyfA or b2481 SWALL:HYFA_ECOLI (SWALL:P23481) (205 aa) fasta scores: E(): 4.1e-36, 49.75% id in 207 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri formate hydrogenlyase subunit 2 hycb or hevb or b2724 or c3284 or sf2741 SWALL:HYCB_ECOLI (SWALL:P16428) (203 aa) fasta scores: E(): 5.2e-37, 50.24% id in 205 aa; hydrogenase-4 subunit A 1419457 hyfA 2883424 hyfA Pectobacterium atrosepticum SCRI1043 hydrogenase-4 subunit A YP_049353.1 1418837 R 218491 CDS YP_049354.1 50120187 2883144 complement(1419553..1419789) 1 NC_004547.2 no significant database matches; hypothetical protein 1419789 2883144 ECA1248 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049354.1 1419553 R 218491 CDS YP_049355.1 50120188 2883423 1420000..1420545 1 NC_004547.2 involved in electron transport from formate to hydrogen; electron transport protein HydN 1420545 hydN 2883423 hydN Pectobacterium atrosepticum SCRI1043 electron transport protein HydN YP_049355.1 1420000 D 218491 CDS YP_049356.1 50120189 2883037 1420602..1422752 1 NC_004547.2 Similar to Escherichia coli formate dehydrogenase H FdhF or b4079 SWALL:FDHF_ECOLI (SWALL:P07658) (715 aa) fasta scores: E(): 2.2e-193, 64.61% id in 715 aa; formate dehydrogenase H 1422752 fdhF 2883037 fdhF Pectobacterium atrosepticum SCRI1043 formate dehydrogenase H YP_049356.1 1420602 D 218491 CDS YP_049357.1 50120190 2883016 1422749..1425052 1 NC_004547.2 Similar to Escherichia coli hydrogenase maturation protein HypF or HydA or b2712 SWALL:HYPF_ECOLI (SWALL:P30131) (750 aa) fasta scores: E(): 1.3e-206, 67.71% id in 734 aa; hydrogenase maturation protein 1425052 hypF 2883016 hypF Pectobacterium atrosepticum SCRI1043 hydrogenase maturation protein YP_049357.1 1422749 D 218491 CDS YP_049358.1 50120191 2881632 1425057..1426040 1 NC_004547.2 Similar to Alcaligenes eutrophus high-affinity nickel transport protein HoxN SWALL:HOXN_ALCEU (SWALL:P23516) (351 aa) fasta scores: E(): 1.2e-68, 54.63% id in 324 aa, and to Bradyrhizobium japonicum hydrogenase nickel incorporation protein HupN or bll6949 SWALL:HUPN_BRAJA (SWALL:Q45247) (381 aa) fasta scores: E(): 1.8e-62, 51.91% id in 314 aa; high-affinity nickel transport protein 1426040 hoxN 2881632 hoxN Pectobacterium atrosepticum SCRI1043 high-affinity nickel transport protein YP_049358.1 1425057 D 218491 CDS YP_049359.1 50120192 2881274 complement(1426256..1426894) 1 NC_004547.2 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; phosphoribosylglycinamide formyltransferase 1426894 purN 2881274 purN Pectobacterium atrosepticum SCRI1043 phosphoribosylglycinamide formyltransferase YP_049359.1 1426256 R 218491 CDS YP_049360.1 50120193 2881273 complement(1426894..1427931) 1 NC_004547.2 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1427931 purM 2881273 purM Pectobacterium atrosepticum SCRI1043 phosphoribosylaminoimidazole synthetase YP_049360.1 1426894 R 218491 CDS YP_049361.1 50120194 2882936 1428285..1428911 1 NC_004547.2 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; uracil phosphoribosyltransferase 1428911 upp 2882936 upp Pectobacterium atrosepticum SCRI1043 uracil phosphoribosyltransferase YP_049361.1 1428285 D 218491 CDS YP_049362.1 50120195 2882961 1429248..1430537 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 uracil permease UraA or b2497 or z3760 or ecs3359 SWALL:URAA_ECOLI (SWALL:P33780) (429 aa) fasta scores: E(): 2.7e-132, 86.85% id in 426 aa; uracil transporter 1430537 uraA 2882961 uraA Pectobacterium atrosepticum SCRI1043 uracil transporter YP_049362.1 1429248 D 218491 CDS YP_049363.1 50120196 2883145 1430628..1431344 1 NC_004547.2 controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; DNA replication initiation factor 1431344 2883145 ECA1257 Pectobacterium atrosepticum SCRI1043 DNA replication initiation factor YP_049363.1 1430628 D 218491 CDS YP_049364.1 50120197 2883139 complement(1431390..1431761) 1 NC_004547.2 Similar to Yersinia pestis arsenate reductase ypo3070 SWALL:Q8ZCC2 (EMBL:AJ414155) (118 aa) fasta scores: E(): 2.4e-28, 72.8% id in 114 aa, and to Escherichia coli protein yfgd or b2495 SWALL:YFGD_ECOLI (SWALL:P76569) (119 aa) fasta scores: E(): 2.2e-27, 71.05% id in 114 aa; arsenate reductase 1431761 2883139 ECA1258 Pectobacterium atrosepticum SCRI1043 arsenate reductase YP_049364.1 1431390 R 218491 CDS YP_049365.1 50120198 2883140 complement(1431776..1433239) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3069/y1412 precursor ypo3069 or y1412 SWALL:YU69_YERPE (SWALL:Q8ZCC3) (486 aa) fasta scores: E(): 4.4e-134, 75.97% id in 487 aa, and to Escherichia coli, and Shigella flexneri hypothetical protein yfgc precursor yfgc or b2494 or sf2538 SWALL:YFGC_ECOLI (SWALL:P76568) (487 aa) fasta scores: E(): 7.1e-129, 71.22% id in 483 aa; hypothetical protein 1433239 2883140 ECA1259 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049365.1 1431776 R 218491 CDS YP_049366.1 50120199 2881542 complement(1433409..1433876) 1 NC_004547.2 bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine; thioredoxin-dependent thiol peroxidase 1433876 bcp 2881542 bcp Pectobacterium atrosepticum SCRI1043 thioredoxin-dependent thiol peroxidase YP_049366.1 1433409 R 218491 CDS YP_049367.1 50120200 2881789 complement(1433929..1434480) 1 NC_004547.2 negative transcriptional regulator of the gcvTHP operon; glycine cleavage system transcriptional repressor 1434480 gcvR 2881789 gcvR Pectobacterium atrosepticum SCRI1043 glycine cleavage system transcriptional repressor YP_049367.1 1433929 R 218491 CDS YP_049368.1 50120201 2885273 1434853..1435731 1 NC_004547.2 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1435731 dapA 2885273 dapA Pectobacterium atrosepticum SCRI1043 dihydrodipicolinate synthase YP_049368.1 1434853 D 218491 CDS YP_049369.1 50120202 2881290 1435748..1436785 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri lipoprotein-34 precursor NlpB or DapX or b2477 or sf2520 SWALL:NLPB_ECOLI (SWALL:P21167) (344 aa) fasta scores: E(): 1.7e-83, 64.05% id in 345 aa; lipoprotein 1436785 nlpB 2881290 nlpB Pectobacterium atrosepticum SCRI1043 lipoprotein YP_049369.1 1435748 D 218491 CDS YP_049370.1 50120203 2881845 1436929..1437642 1 NC_004547.2 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1437642 purC 2881845 purC Pectobacterium atrosepticum SCRI1043 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_049370.1 1436929 D 218491 CDS YP_049371.1 50120204 2883141 1437843..1438295 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo3057 SWALL:Q8ZCD4 (EMBL:AJ414155) (150 aa) fasta scores: E(): 5.6e-44, 83.33% id in 150 aa, and to Salmonella typhi membrane protein sty1838 SWALL:Q8Z6E5 (EMBL:AL627271) (148 aa) fasta scores: E(): 1.7e-36, 71.03% id in 145 aa; hypothetical protein 1438295 2883141 ECA1265 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049371.1 1437843 D 218491 CDS YP_049372.1 50120205 2883142 1438319..1440418 1 NC_004547.2 Similar to Yersinia pestis acetyltransferase ypo3056 or y1424 SWALL:Q8ZCD5 (EMBL:AJ414155) (699 aa) fasta scores: E(): 4e-156, 56.57% id in 677 aa, and to Escherichia coli O157:H7 orf, hypothetical protein ypfi or z3733 or ecs3336 SWALL:Q8XBD6 (EMBL:AE005477) (671 aa) fasta scores: E(): 4.7e-72, 51.68% id in 681 aa; acetyltransferase 1440418 2883142 ECA1266 Pectobacterium atrosepticum SCRI1043 acetyltransferase YP_049372.1 1438319 D 218491 CDS YP_049373.1 50120206 2885536 complement(1440451..1441716) 1 NC_004547.2 The N-terminal region of this CDS is similar to several thioredoxinx including Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, Salmonella typhimurium, Salmonella typhi, and Shigella flexneri thioredoxin 1 SWALL:THIO_ECOLI (SWALL:P00274) (108 aa) fasta scores: E(): 1.7e-14, 46.22% id in 106 aa, and to Thiobacillus ferrooxidans thioredoxin trxA SWALL:THIO_THIFE (SWALL:P52233) (108 aa) fasta scores: E(): 2.3e-14, 45.79% id in 107 aa; thioredoxin 1441716 2885536 ECA1267 Pectobacterium atrosepticum SCRI1043 thioredoxin YP_049373.1 1440451 R 218491 CDS YP_049374.1 50120207 2884278 complement(1441783..1443228) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri TldD protein or b3244 or c3999 or sf3283 SWALL:TLDD_ECOLI (SWALL:P46473) (481 aa) fasta scores: E(): 6e-95, 54.66% id in 472 aa. Also similar to ECA0273 (55.297% id. in 472 aa overlap); suppressor of the inhibitory activity of the carbon storage regulator CsrA 1443228 tldD 2884278 tldD Pectobacterium atrosepticum SCRI1043 suppressor of the inhibitory activity of the carbon storage regulator CsrA YP_049374.1 1441783 R 218491 CDS YP_049375.1 50120208 2885537 complement(1443263..1444627) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 PmbA protein PmbA or TldE or b4235 or z5845 or ecs5212 SWALL:PMBA_ECOLI (SWALL:P24231) (450 aa) fasta scores: E(): 1.8e-61, 41.4% id in 442 aa; suppressor of the inhibitory activity of the carbon storage regulator CsrA 1444627 2885537 ECA1269 Pectobacterium atrosepticum SCRI1043 suppressor of the inhibitory activity of the carbon storage regulator CsrA YP_049375.1 1443263 R 218491 CDS YP_049376.1 50120209 2885538 complement(1444792..1445214) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri biopolymer transport ExbD protein ExbD or b3005 or c3740 or z4358 or ecs3889 or sf3050 SWALL:EXBD_ECOLI (SWALL:P18784) (141 aa) fasta scores: E(): 1.3e-08, 34.32% id in 134 aa, and to Neisseria gonorrhoeae biopolymer transport ExbD protein ExbD SWALL:EXBD_NEIGO (SWALL:O06434) (144 aa) fasta scores: E(): 1.6e-12, 39% id in 141 aa; biopolymer transport protein 1445214 2885538 ECA1270 Pectobacterium atrosepticum SCRI1043 biopolymer transport protein YP_049376.1 1444792 R 218491 CDS YP_049377.1 50120210 2885680 complement(1445229..1446005) 1 NC_004547.2 Similar to Neisseria meningitidis biopolymer transport ExbB protein WALL:EXBB_NEIMC (SWALL:P95375) (220 aa) fasta scores: E(): 1e-23, 38.42% id in 216 aa, and to Xanthomonas campestris biopolymer transport ExbB protein or xcc0009 SWALL:EXBB_XANCP (SWALL:O34260) (253 aa) fasta scores: E(): 1.8e-24, 39.81% id in 216 aa; biopolymer transport protein 1446005 2885680 ECA1271 Pectobacterium atrosepticum SCRI1043 biopolymer transport protein YP_049377.1 1445229 R 218491 CDS YP_049378.1 50120211 2885681 complement(1446084..1446962) 1 NC_004547.2 Similar to Escherichia coli TonB protein TonB or ExbA or b1252 SWALL:TONB_ECOLI (SWALL:P02929) (239 aa) fasta scores: E(): 0.00081, 31.57% id in 247 aa, and to Bordetella pertussis TonB protein SWALL:Q9S3M6 (EMBL:AJ132741) (266 aa) fasta scores: E(): 1.3e-11, 34.55% id in 246 aa; TonB-like protein 1446962 2885681 ECA1272 Pectobacterium atrosepticum SCRI1043 TonB-like protein YP_049378.1 1446084 R 218491 CDS YP_049379.1 50120212 2885682 complement(1447133..1448107) 1 NC_004547.2 Similar to Escherichia coli protein FecR or b4292 SWALL:FECR_ECOLI (SWALL:P23485) (317 aa) fasta scores: E(): 2.9e-18, 30.09% id in 309 aa, and to Pseudomonas aeruginosa probable transmembrane sensor pa0471 SWALL:Q9I647 (EMBL:AE004485) (323 aa) fasta scores: E(): 8.9e-27, 32.58% id in 313 aa; sensor protein 1448107 2885682 ECA1273 Pectobacterium atrosepticum SCRI1043 sensor protein YP_049379.1 1447133 R 218491 CDS YP_049380.1 50120213 2882907 complement(1448117..1448638) 1 NC_004547.2 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; RNA polymerase sigma factor 1448638 2882907 ECA1274 Pectobacterium atrosepticum SCRI1043 RNA polymerase sigma factor YP_049380.1 1448117 R 218491 CDS YP_049381.1 50120214 2882908 1449048..1451423 1 NC_004547.2 Similar to Anabaena sp. ferrichrome-iron receptor all2610 SWALL:Q8YTV3 (EMBL:AP003590) (857 aa) fasta scores: E(): 3.4e-38, 27.33% id in 684 aa, and to Pseudomonas putida outer membrane ferric siderophore receptor, pp3155 SWALL:AAN68763 (EMBL:AE016785) (709 aa) fasta scores: E(): 2.2e-29, 27.35% id in 691 aa; TonB-dependent ferrichrome-iron receptor 1451423 2882908 ECA1275 Pectobacterium atrosepticum SCRI1043 TonB-dependent ferrichrome-iron receptor YP_049381.1 1449048 D 218491 CDS YP_049382.1 50120215 2882909 1451498..1453288 1 NC_004547.2 Similar to Bradyrhizobium japonicum Blr7537 protein SWALL:BAC52802 (EMBL:AP005962) (587 aa) fasta scores: E(): 2e-65, 34.16% id in 562 aa, and to Pasteurella multocida hypothetical protein Pm1072 SWALL:Q9CLX7 (EMBL:AE006148) (585 aa) fasta scores: E(): 4.2e-55, 33.39% id in 548 aa; ABC transporter ATP-binding protein 1453288 2882909 ECA1276 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_049382.1 1451498 D 218491 CDS YP_049383.1 50120216 2882757 complement(1453350..1453721) 1 NC_004547.2 no significant database matches; hypothetical protein 1453721 2882757 ECA1277 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049383.1 1453350 R 218491 CDS YP_049384.1 50120217 2882758 complement(1453759..>1453977) 1 NC_004547.2 Partial CDS. Similar to the C-terminal regions several proteins including Methanosarcina acetivorans hypothetical protein Ma0995 SWALL:Q8TS12 (EMBL:AE010765) (251 aa) fasta scores: E(): 3.7e-12, 61.29% id in 62 aa, and to Bacillus halodurans hypothetical protein Bh0315 SWALL:Q9KG01 (EMBL:AP001508) (237 aa) fasta scores: E(): 2.9e-08, 49.2% id in 63 aa; hypothetical protein >1453977 2882758 ECA1278 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049384.1 1453759 R 218491 CDS YP_049385.1 50120218 2882759 1454201..1454428 1 NC_004547.2 Similar to Agrobacterium tumefaciens hypothetical protein atu2406 or agr_c_4366 SWALL:Q8UCS7 (EMBL:AE009188) (85 aa) fasta scores: E(): 3.7e-16, 67.12% id in 73 aa, and to Ralstonia solanacearum hypothetical protein rsp1158 or rs05427 SWALL:Q8XQR3 (EMBL:AL646083) (82 aa) fasta scores: E(): 3.6e-15, 62.66% id in 75 aa; hypothetical protein 1454428 2882759 ECA1279 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049385.1 1454201 D 218491 CDS YP_049386.1 50120219 2882427 1454597..1455214 1 NC_004547.2 Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; esterase 1455214 2882427 ECA1280 Pectobacterium atrosepticum SCRI1043 esterase YP_049386.1 1454597 D 218491 CDS YP_049387.1 50120220 2882428 1455488..1457158 1 NC_004547.2 Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 5.4e-83, 51.52% id in 559 aa, and to Salmonella typhimurium methyl-accepting chemotaxis citrate transducer Tcp or stm3577 SWALL:MCPC_SALTY (SWALL:Q02755) (547 aa) fasta scores: E(): 6e-85, 53.86% id in 557 aa; methyl-accepting chemotaxis protein 1457158 2882428 ECA1281 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_049387.1 1455488 D 218491 CDS YP_049388.1 50120221 2882887 complement(1457257..1458435) 1 NC_004547.2 Similar to Clostridium acetobutylicum acetyl-CoA acetyltransferase ThlA or Thl or cac2873 SWALL:THLA_CLOAB (SWALL:P45359) (392 aa) fasta scores: E(): 9.5e-81, 59.48% id in 390 aa, and to Escherichia coli acetyl-CoA acetyltransferase AtoB or b2224 SWALL:ATOB_ECOLI (SWALL:P76461) (394 aa) fasta scores: E(): 1.2e-87, 64.01% id in 389 aa; acetyl-CoA acetyltransferase 1458435 atoB 2882887 atoB Pectobacterium atrosepticum SCRI1043 acetyl-CoA acetyltransferase YP_049388.1 1457257 R 218491 CDS YP_049389.1 50120222 2882886 complement(1458447..1459094) 1 NC_004547.2 Similar to Escherichia coli acetate CoA-transferase beta subunit AtoA or b2222 SWALL:ATOA_ECOLI (SWALL:P76459) (216 aa) fasta scores: E(): 1.4e-54, 70.33% id in 209 aa, and to Clostridium acetobutylicum butyrate-acetoacetate CoA-transferase subunit B CtfB or cap0164 SWALL:CTFB_CLOAB (SWALL:P23673) (221 aa) fasta scores: E(): 2.6e-44, 57.2% id in 215 aa; acetate CoA-transferase subunit beta 1459094 atoA 2882886 atoA Pectobacterium atrosepticum SCRI1043 acetate CoA-transferase subunit beta YP_049389.1 1458447 R 218491 CDS YP_049390.1 50120223 2881653 complement(1459094..1459750) 1 NC_004547.2 Similar to Escherichia coli acetate CoA-transferase alpha subunit AtoD or b2221 SWALL:ATOD_ECOLI (SWALL:P76458) (220 aa) fasta scores: E(): 3.9e-48, 61.46% id in 218 aa; acetyl-CoA:acetoacetyl-CoA transferase subunit alpha 1459750 atoD 2881653 atoD Pectobacterium atrosepticum SCRI1043 acetyl-CoA:acetoacetyl-CoA transferase subunit alpha YP_049390.1 1459094 R 218491 CDS YP_049391.1 50120224 2882429 complement(1459907..1460206) 1 NC_004547.2 Similar to the C-terminal regions of several hypothetical proteins including Pseudomonas aeruginosa hypothetical protein Pa2886 SWALL:Q9HZW1 (EMBL:AE004714) (600 aa) fasta scores: E(): 1.9e-06, 37% id in 100 aa, and to Mycobacterium tuberculosis hypothetical protein rv0976c or mtv044.04c or mt1003.1 SWALL:O86320 (EMBL:Z79700) (560 aa) fasta scores: E(): 0.00068, 35.29% id in 85 aa; hypothetical protein 1460206 2882429 ECA1285 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049391.1 1459907 R 218491 CDS YP_049392.1 50120225 2882430 complement(1460206..1461546) 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein Pa2886 SWALL:Q9HZW1 (EMBL:AE004714) (600 aa) fasta scores: E(): 1.4e-40, 34.88% id in 450 aa, and to Streptomyces coelicolor hypothetical protein sco4379 or scd10.11 SWALL:Q9K3W5 (EMBL:AL939119) (558 aa) fasta scores: E(): 2.3e-21, 34.24% id in 365 aa; hypothetical protein 1461546 2882430 ECA1286 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049392.1 1460206 R 218491 CDS YP_049393.1 50120226 2884964 complement(1461608..1462930) 1 NC_004547.2 Similar to Bacillus subtilis Mg(2+)/citrate complex secondary transporter CitM SWALL:CITM_BACSU (SWALL:P55069) (433 aa) fasta scores: E(): 7.6e-53, 40.76% id in 444 aa, and to Xylella fastidiosa Mg++/citrate complex transporter xf0320 SWALL:Q9PGI0 (EMBL:AE003885) (457 aa) fasta scores: E(): 1.1e-68, 41.83% id in 447 aa; Mg(2+)/citrate complex transporter 1462930 citM 2884964 citM Pectobacterium atrosepticum SCRI1043 Mg(2+)/citrate complex transporter YP_049393.1 1461608 R 218491 CDS YP_049394.1 50120227 2881735 1463404..1464303 1 NC_004547.2 Similar to Pseudomonas putida transcriptional regulator, LysR family pp2054 SWALL:AAN67668 (EMBL:AE016781) (297 aa) fasta scores: E(): 6.5e-28, 33.33% id in 297 aa, and to Escherichia coli hypothetical transcriptional regulator ybhd or b0768 SWALL:YBHD_ECOLI (SWALL:P52696) (317 aa) fasta scores: E(): 1.6e-26, 28.17% id in 291 aa; LysR family transcriptional regulator 1464303 2881735 ECA1288 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_049394.1 1463404 D 218491 CDS YP_049395.1 50120228 2881736 complement(1464367..1464558) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo3055 SWALL:Q8ZCD6 (EMBL:AJ414155) (64 aa) fasta scores: E(): 1.4e-19, 73.84% id in 65 aa, and to Salmonella typhimurium, and Salmonella typhi inner membrane protein stm2484 or sty2722 SWALL:Q8XF02 (EMBL:AE008812) (66 aa) fasta scores: E(): 5.5e-17, 66.12% id in 62 aa; hypothetical protein 1464558 2881736 ECA1289 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049395.1 1464367 R 218491 CDS YP_049396.1 50120229 2881737 complement(1464561..1465232) 1 NC_004547.2 Similar to Yersinia pestis carboxypeptidase ypo3054 or y1426 SWALL:Q8ZCD7 (EMBL:AJ414155) (225 aa) fasta scores: E(): 1.8e-65, 68.34% id in 218 aa, and to Pasteurella multocida hypothetical protein Pm1021 SWALL:Q9CM23 (EMBL:AE006143) (228 aa) fasta scores: E(): 8.7e-46, 51.13% id in 221 aa; D-alanyl-D-alanine carboxypeptidase 1465232 2881737 ECA1290 Pectobacterium atrosepticum SCRI1043 D-alanyl-D-alanine carboxypeptidase YP_049396.1 1464561 R 218491 CDS YP_049397.1 50120230 2885275 complement(1465232..1466359) 1 NC_004547.2 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 1466359 dapE 2885275 dapE Pectobacterium atrosepticum SCRI1043 succinyl-diaminopimelate desuccinylase YP_049397.1 1465232 R 218491 CDS YP_049398.1 50120231 2881284 complement(1466361..1466738) 1 NC_004547.2 Similar to Escherichia coli protein yffb or b2471 SWALL:YFFB_ECOLI (SWALL:P24178) (118 aa) fasta scores: E(): 8e-24, 61.15% id in 121 aa, and to Yersinia pestis hypothetical protein ypo3052 or y1428 SWALL:Q8ZCD9 (EMBL:AJ414155) (132 aa) fasta scores: E(): 1.1e-27, 67.5% id in 120 aa; hypothetical protein 1466738 2881284 ECA1292 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049398.1 1466361 R 218491 CDS YP_049399.1 50120232 2881285 complement(1467197..1467907) 1 NC_004547.2 Similar to Yersinia pestis aspartate/glutamate racemase ypo2758 SWALL:Q8ZD34 (EMBL:AJ414153) (231 aa) fasta scores: E(): 2.5e-58, 67.54% id in 228 aa, and to Salmonella typhi hypothetical protein Sty3159 SWALL:Q8Z402 (EMBL:AL627277) (235 aa) fasta scores: E(): 1.6e-49, 55.89% id in 229 aa; aspartate/glutamate racemase 1467907 2881285 ECA1293 Pectobacterium atrosepticum SCRI1043 aspartate/glutamate racemase YP_049399.1 1467197 R 218491 CDS YP_049400.1 50120233 2883918 1468125..1468334 1 NC_004547.2 member of the CspA family; constitutively expressed RNA/ssDNA-binding protein; functions in helping cells adapt to low temperature; aids nucleic acid melting; participates in gene regulation; can act as a transcription antiterminator; cold shock protein CspE 1468334 cspE 2883918 cspE Pectobacterium atrosepticum SCRI1043 cold shock protein CspE YP_049400.1 1468125 D 218491 CDS YP_049401.1 50120234 2884946 complement(1468399..1468782) 1 NC_004547.2 Similar to Escherichia coli protein CrcB or b0624 SWALL:CRCB_ECOLI (SWALL:P37002) (127 aa) fasta scores: E(): 1.1e-26, 62.2% id in 127 aa, and to Yersinia pestis protein crcb homolog crcb or ypo2596 or y1168 SWALL:CRCB_YERPE (SWALL:Q8ZDH2) (127 aa) fasta scores: E(): 1.7e-27, 66.11% id in 121 aa; hypothetical protein 1468782 crcB 2884946 crcB Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049401.1 1468399 R 218491 CDS YP_049402.1 50120235 2884314 1469182..1469379 1 NC_004547.2 TatE; similar to TatA and found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a; twin argininte translocase protein A 1469379 tatE 2884314 tatE Pectobacterium atrosepticum SCRI1043 twin argininte translocase protein A YP_049402.1 1469182 D 218491 CDS YP_049403.1 50120236 2883210 complement(1469462..1470427) 1 NC_004547.2 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; lipoyl synthase 1470427 lipA 2883210 lipA Pectobacterium atrosepticum SCRI1043 lipoyl synthase YP_049403.1 1469462 R 218491 CDS YP_049404.1 50120237 2883211 complement(1470655..1471338) 1 NC_004547.2 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; lipoate-protein ligase B 1471338 lipB 2883211 lipB Pectobacterium atrosepticum SCRI1043 lipoate-protein ligase B YP_049404.1 1470655 R 218491 CDS YP_049405.1 50120238 2881286 complement(1471487..1471750) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi cytoplasmic protein ybed or stm0636 or sty0687 SWALL:Q8XGV6 (EMBL:AE008725) (87 aa) fasta scores: E(): 4.9e-27, 88.5% id in 87 aa, and to Yersinia pestis hypothetical protein ypo2600 or y1174 SWALL:Q8ZDG8 (EMBL:AJ414153) (87 aa) fasta scores: E(): 5.8e-27, 85.05% id in 87 aa; hypothetical protein 1471750 2881286 ECA1299 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049405.1 1471487 R 218491 CDS YP_049406.1 50120239 2881622 complement(1471888..1473099) 1 NC_004547.2 penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; D-alanyl-D-alanine carboxypeptidase fraction A 1473099 dacA 2881622 dacA Pectobacterium atrosepticum SCRI1043 D-alanyl-D-alanine carboxypeptidase fraction A YP_049406.1 1471888 R 218491 CDS YP_049407.1 50120240 2884718 complement(1473265..1474380) 1 NC_004547.2 Similar to Escherichia coli rare lipoprotein A precursor RlpA or b0633 SWALL:RLPA_ECOLI (SWALL:P10100) (362 aa) fasta scores: E(): 8e-52, 50.94% id in 371 aa; rare lipoprotein A 1474380 rlpA 2884718 rlpA Pectobacterium atrosepticum SCRI1043 rare lipoprotein A YP_049407.1 1473265 R 218491 CDS YP_049408.1 50120241 2882151 complement(1474394..1475506) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri Rod shape-determining protein roda mrdb or roda or b0634 or z0780 or ecs0672 or sf0647 SWALL:RODA_ECOLI (SWALL:P15035) (370 aa) fasta scores: E(): 8.1e-122, 82.7% id in 370 aa; cell wall shape-determining protein 1475506 mrdB 2882151 mrdB Pectobacterium atrosepticum SCRI1043 cell wall shape-determining protein YP_049408.1 1474394 R 218491 CDS YP_049409.1 50120242 2882046 complement(1475516..1477420) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 penicillin-binding protein 2 MrdA or PbpA or b0635 or c0726 or z0781 or ecs0673 SWALL:PBP2_ECOLI (SWALL:P08150) (633 aa) fasta scores: E(): 5.9e-203, 79.74% id in 632 aa; penicillin-binding protein 2 1477420 mrdA 2882046 mrdA Pectobacterium atrosepticum SCRI1043 penicillin-binding protein 2 YP_049409.1 1475516 R 218491 CDS YP_049410.1 50120243 2882101 complement(1477454..1477924) 1 NC_004547.2 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 1477924 2882101 ECA1304 Pectobacterium atrosepticum SCRI1043 rRNA large subunit methyltransferase YP_049410.1 1477454 R 218491 CDS YP_049411.1 50120244 2882102 complement(1477926..1478243) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi Acr, homolog of plant IojaP protein ybeb or stm0642 or sty0693 SWALL:Q8XF37 (EMBL:AE008725) (105 aa) fasta scores: E(): 2.7e-33, 83.65% id in 104 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri hypothetical protein ybeb or b0637 or c0728 or sf0644 SWALL:YBEB_ECOLI (SWALL:P05848) (105 aa) fasta scores: E(): 9.2e-33, 82.69% id in 104 aa; hypothetical protein 1478243 2882102 ECA1305 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049411.1 1477926 R 218491 CDS YP_049412.1 50120245 2885135 complement(1478437..1479078) 1 NC_004547.2 transfers an adenyl group from ATP to NaMN to form nicotinic acid adenine dinucleotide (NaAD) which is then converted to the ubiquitous compound NAD by NAD synthetase; essential enzyme in bacteria; nicotinic acid mononucleotide adenylyltransferase 1479078 nadD 2885135 nadD Pectobacterium atrosepticum SCRI1043 nicotinic acid mononucleotide adenylyltransferase YP_049412.1 1478437 R 218491 CDS YP_049413.1 50120246 2882076 complement(1479093..1480118) 1 NC_004547.2 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 1480118 holA 2882076 holA Pectobacterium atrosepticum SCRI1043 DNA polymerase III subunit delta YP_049413.1 1479093 R 218491 CDS YP_049414.1 50120247 2884719 complement(1480115..1480669) 1 NC_004547.2 rare lipoprotein B; involved in the assembly of LPS in the outer membrane; LPS-assembly lipoprotein RlpB 1480669 rlpB 2884719 rlpB Pectobacterium atrosepticum SCRI1043 LPS-assembly lipoprotein RlpB YP_049414.1 1480115 R 218491 CDS YP_049415.1 50120248 2883434 complement(1480684..1483266) 1 NC_004547.2 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 1483266 leuS 2883434 leuS Pectobacterium atrosepticum SCRI1043 leucyl-tRNA synthetase YP_049415.1 1480684 R 218491 CDS YP_049416.1 50120249 2882103 1483576..1484058 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo2611 SWALL:Q8ZDF7 (EMBL:AJ414153) (160 aa) fasta scores: E(): 3.3e-46, 76.87% id in 160 aa, and to Salmonella typhimurium cytoplasmic protein ybel or stm0653 SWALL:Q8ZQZ2 (EMBL:AE008726) (157 aa) fasta scores: E(): 2.3e-42, 71.25% id in 160 aa; hypothetical protein 1484058 2882103 ECA1310 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049416.1 1483576 D 218491 CDS YP_049417.1 50120250 2882106 complement(1484115..1484840) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 glutamate/aspartate transport ATP-binding protein GltL or b0652 or z0802 or ecs0691 SWALL:GLTL_ECOLI (SWALL:P41076) (241 aa) fasta scores: E(): 4.5e-73, 87.55% id in 241 aa; glutamate/aspartate transport ATP-binding protein 1484840 gltL 2882106 gltL Pectobacterium atrosepticum SCRI1043 glutamate/aspartate transport ATP-binding protein YP_049417.1 1484115 R 218491 CDS YP_049418.1 50120251 2882105 complement(1484840..1485514) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 glutamate/aspartate transport system permease protein GltK or b0653 or c0737 or z0803 or ecs0692 SWALL:GLTK_ECOLI (SWALL:P41075) (224 aa) fasta scores: E(): 2.2e-73, 84.75% id in 223 aa; glutamate/aspartate transport system permease 1485514 gltK 2882105 gltK Pectobacterium atrosepticum SCRI1043 glutamate/aspartate transport system permease YP_049418.1 1484840 R 218491 CDS YP_049419.1 50120252 2882038 complement(1485518..1486258) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 glutamate/aspartate transport system permease protein GltJ or b0654 or c0738 SWALL:GLTJ_ECOLI (SWALL:P41074) (246 aa) fasta scores: E(): 5.8e-85, 88.61% id in 246 aa; glutamate/aspartate transport system permease 1486258 gltJ 2882038 gltJ Pectobacterium atrosepticum SCRI1043 glutamate/aspartate transport system permease YP_049419.1 1485518 R 218491 CDS YP_049420.1 50120253 2882037 complement(1486479..1487375) 1 NC_004547.2 Similar to Escherichia coli glutamate/aspartate periplasmic binding protein precursor HltI or b0655 SWALL:GLTI_ECOLI (SWALL:P37902) (302 aa) fasta scores: E(): 1.5e-88, 78.8% id in 302 aa; glutamate and aspartate transporter subunit 1487375 gltI 2882037 gltI Pectobacterium atrosepticum SCRI1043 glutamate and aspartate transporter subunit YP_049420.1 1486479 R 218491 CDS YP_049421.1 50120254 2883040 complement(1487825..1489354) 1 NC_004547.2 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 1489354 lnt 2883040 lnt Pectobacterium atrosepticum SCRI1043 apolipoprotein N-acyltransferase YP_049421.1 1487825 R 218491 CDS YP_049422.1 50120255 2884951 complement(1489362..1490240) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi magnesium and cobalt efflux protein CorC or stm0667 or sty0712 SWALL:CORC_SALTY (SWALL:Q9R874) (292 aa) fasta scores: E(): 1.5e-92, 85.95% id in 292 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri magnesium and cobalt efflux protein CorC or b0658 or c0743 or z0807 or ecs0696 or sf0624 SWALL:CORC_ECOLI (SWALL:P77392) (292 aa) fasta scores: E(): 2.6e-92, 85.61% id in 292 aa; magnesium and cobalt efflux protein corc 1490240 corC 2884951 corC Pectobacterium atrosepticum SCRI1043 magnesium and cobalt efflux protein corc YP_049422.1 1489362 R 218491 CDS YP_049423.1 50120256 2882195 complement(1490492..1490971) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2618 or y1193 SWALL:YQ18_YERPE (SWALL:Q8ZDF0) (157 aa) fasta scores: E(): 5.2e-49, 80.64% id in 155 aa, and to Salmonella typhi hypothetical protein ybey or sty0714 SWALL:YBEY_SALTI (SWALL:Q8Z8G6) (157 aa) fasta scores: E(): 2.1e-48, 79.87% id in 154 aa; metalloprotease 1490971 2882195 ECA1317 Pectobacterium atrosepticum SCRI1043 metalloprotease YP_049423.1 1490492 R 218491 CDS YP_049424.1 50120257 2882196 complement(1490968..1492026) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri PhoH-like protein ybez or b0660 or c0745 or z0809 or ecs0698 or sf0622 SWALL:PHOL_ECOLI (SWALL:P77349) (359 aa) fasta scores: E(): 3.2e-109, 88.92% id in 343 aa, and to Yersinia pestis hypothetical protein ypo2619 or y1194 SWALL:AAM84771 (EMBL:AJ414153) (370 aa) fasta scores: E(): 8.5e-110, 88.33% id in 343 aa; PhoH-like ATP-binding protein 1492026 2882196 ECA1318 Pectobacterium atrosepticum SCRI1043 PhoH-like ATP-binding protein YP_049424.1 1490968 R 218491 CDS YP_049425.1 50120258 2882197 complement(1492350..1493774) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein ylea or b0661 or c0747 or z0810 or ecs0699 SWALL:YLEA_ECOLI (SWALL:P77645) (474 aa) fasta scores: E(): 2.5e-163, 86.28% id in 474 aa, and to Salmonella typhimurium miab protein miab or stm0670 SWALL:Q9RCI2 (EMBL:AJ249116) (474 aa) fasta scores: E(): 7.8e-163, 86.07% id in 474 aa; hypothetical protein 1493774 2882197 ECA1319 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049425.1 1492350 R 218491 CDS YP_049426.1 50120259 2884215 1494007..1495173 1 NC_004547.2 catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; functions in the biosynthesis of ubiquinone or coenzyme Q; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 1495173 ubiF 2884215 ubiF Pectobacterium atrosepticum SCRI1043 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase YP_049426.1 1494007 D 218491 CDS YP_049427.1 50120260 2881531 complement(1495196..1495876) 1 NC_004547.2 Weakly similar to Vibrio vulnificus hypothetical protein vv12006 SWALL:AAO10403 (EMBL:AE016803) (381 aa) fasta scores: E(): 1.9, 23.52% id in 170 aa; hypothetical protein 1495876 2881531 ECA1321 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049427.1 1495196 R 218491 CDS YP_049428.1 50120261 2881532 complement(1495947..1496435) 1 NC_004547.2 no significant database matches; hypothetical protein 1496435 2881532 ECA1322 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049428.1 1495947 R 218491 CDS YP_049429.1 50120262 2884105 complement(1497427..1499091) 1 NC_004547.2 functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; asparagine synthetase B 1499091 asnB 2884105 asnB Pectobacterium atrosepticum SCRI1043 asparagine synthetase B YP_049429.1 1497427 R 218491 CDS YP_049430.1 50120263 2884908 complement(1499295..1500518) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri N-acetylglucosamine repressor NagC or NagR or b0676 or c0751 or z0823 or ecs0706 or sf0617 SWALL:NAGC_ECOLI (SWALL:P15301) (406 aa) fasta scores: E(): 7.3e-114, 74.87% id in 406 aa; N-acetylglucosamine repressor 1500518 nagC 2884908 nagC Pectobacterium atrosepticum SCRI1043 N-acetylglucosamine repressor YP_049430.1 1499295 R 218491 CDS YP_049431.1 50120264 2884928 complement(1500630..1501778) 1 NC_004547.2 catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate; N-acetylglucosamine-6-phosphate deacetylase 1501778 nagA 2884928 nagA Pectobacterium atrosepticum SCRI1043 N-acetylglucosamine-6-phosphate deacetylase YP_049431.1 1500630 R 218491 CDS YP_049432.1 50120265 2884907 complement(1501795..1502595) 1 NC_004547.2 catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; glucosamine-6-phosphate deaminase 1502595 nagB 2884907 nagB Pectobacterium atrosepticum SCRI1043 glucosamine-6-phosphate deaminase YP_049432.1 1501795 R 218491 CDS YP_049433.1 50120266 2884909 1502956..1504452 1 NC_004547.2 Similar to Escherichia coli PTS system, N-acetylglucosamine-specific IIABC component NagE or pPstN or b0679 SWALL:PTAA_ECOLI (SWALL:P09323) (648 aa) fasta scores: E(): 7.8e-62, 45.16% id in 496 aa; PTS system N-acetylglucosamine-specific transporter subunit IIABC 1504452 nagE 2884909 nagE Pectobacterium atrosepticum SCRI1043 PTS system N-acetylglucosamine-specific transporter subunit IIABC YP_049433.1 1502956 D 218491 CDS YP_049434.1 50120267 2881330 1504627..1506285 1 NC_004547.2 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; glutaminyl-tRNA synthetase 1506285 glnS 2881330 glnS Pectobacterium atrosepticum SCRI1043 glutaminyl-tRNA synthetase YP_049434.1 1504627 D 218491 CDS YP_049435.1 50120268 2883460 complement(1506349..1506798) 1 NC_004547.2 negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer; ferric uptake regulator 1506798 fur 2883460 fur Pectobacterium atrosepticum SCRI1043 ferric uptake regulator YP_049435.1 1506349 R 218491 CDS YP_049436.1 50120269 2881792 complement(1507128..1507655) 1 NC_004547.2 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA 1507655 fldA 2881792 fldA Pectobacterium atrosepticum SCRI1043 flavodoxin FldA YP_049436.1 1507128 R 218491 CDS YP_049437.1 50120270 2881533 1508259..1508435 1 NC_004547.2 no significant database matches; hypothetical protein 1508435 2881533 ECA1331 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049437.1 1508259 D 218491 CDS YP_049438.1 50120271 2881534 1508540..1510207 1 NC_004547.2 Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 6.3e-68, 46.49% id in 570 aa; methyl-accepting chemotaxis protein 1510207 2881534 ECA1332 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_049438.1 1508540 D 218491 CDS YP_049439.1 50120272 2881296 complement(1510323..1510604) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2637 or y1211 SWALL:AAM84787 (EMBL:AJ414153) (95 aa) fasta scores: E(): 2e-28, 92.39% id in 92 aa, and to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein ybfe or b0685 or z0834 or ecs0716 or sf0608 SWALL:YBFE_ECOLI (SWALL:P75735) (120 aa) fasta scores: E(): 5.4e-25, 81.72% id in 93 aa; LexA regulated protein 1510604 2881296 ECA1333 Pectobacterium atrosepticum SCRI1043 LexA regulated protein YP_049439.1 1510323 R 218491 CDS YP_049440.1 50120273 2881297 complement(1510897..1511664) 1 NC_004547.2 Similar to Escherichia coli esterase/lipase ybff or b0686 SWALL:YBFF_ECOLI (SWALL:P75736) (254 aa) fasta scores: E(): 5.2e-69, 67.58% id in 253 aa; hypothetical protein 1511664 2881297 ECA1334 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049440.1 1510897 R 218491 CDS YP_049441.1 50120274 2884407 1511938..1512474 1 NC_004547.2 negative modulator of the initiation of chromosome replication; replication initiation regulator SeqA 1512474 seqA 2884407 seqA Pectobacterium atrosepticum SCRI1043 replication initiation regulator SeqA YP_049441.1 1511938 D 218491 CDS YP_049442.1 50120275 2884905 1512651..1514294 1 NC_004547.2 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; phosphoglucomutase 1514294 pgm 2884905 pgm Pectobacterium atrosepticum SCRI1043 phosphoglucomutase YP_049442.1 1512651 D 218491 CDS YP_049443.1 50120276 2881298 complement(1514357..1514785) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo2687 or y1260 SWALL:Q8ZDA1 (EMBL:AJ414153) (142 aa) fasta scores: E(): 2.3e-37, 80.28% id in 142 aa, and to Pyrococcus abyssi hypothetical protein pyrab09950 or pab0665 SWALL:Q9V003 (EMBL:AJ248286) (137 aa) fasta scores: E(): 3.6e-20, 52.48% id in 141 aa; hypothetical protein 1514785 2881298 ECA1337 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049443.1 1514357 R 218491 CDS YP_049444.1 50120277 2884849 complement(1514879..1515559) 1 NC_004547.2 response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport; DNA-binding transcriptional activator KdpE 1515559 kdpE 2884849 kdpE Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional activator KdpE YP_049444.1 1514879 R 218491 CDS YP_049445.1 50120278 2884848 complement(1515565..1518297) 1 NC_004547.2 sensory histidine kinase in two-component regulatory system with KdpE; signal sensing protein; sensor protein KdpD 1518297 kdpD 2884848 kdpD Pectobacterium atrosepticum SCRI1043 sensor protein KdpD YP_049445.1 1515565 R 218491 CDS YP_049446.1 50120279 2884847 complement(1518525..1519100) 1 NC_004547.2 Similar to Escherichia coli potassium-transporting ATPase c chain KdpC or b0696 SWALL:ATKC_ECOLI (SWALL:P03961) (190 aa) fasta scores: E(): 3.1e-32, 55.08% id in 187 aa; potassium-transporting ATPase subunit C 1519100 kdpC 2884847 kdpC Pectobacterium atrosepticum SCRI1043 potassium-transporting ATPase subunit C YP_049446.1 1518525 R 218491 CDS YP_049447.1 50120280 2884846 complement(1519120..1521264) 1 NC_004547.2 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit B 1521264 kdpB 2884846 kdpB Pectobacterium atrosepticum SCRI1043 potassium-transporting ATPase subunit B YP_049447.1 1519120 R 218491 CDS YP_049448.1 50120281 2884868 complement(1521280..1522968) 1 NC_004547.2 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; potassium-transporting ATPase subunit A 1522968 kdpA 2884868 kdpA Pectobacterium atrosepticum SCRI1043 potassium-transporting ATPase subunit A YP_049448.1 1521280 R 218491 CDS YP_049449.1 50120282 2882529 complement(1522968..1523204) 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c0784 SWALL:AAN79257 (EMBL:AE016757) (67 aa) fasta scores: E(): 4.9e-06, 52.38% id in 63 aa, and to Staphylococcus aureus membrane protein SWALL:O87363 (EMBL:AF051917) (77 aa) fasta scores: E(): 2.9, 28.37% id in 74 aa; hypothetical protein 1523204 2882529 ECA1343 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049449.1 1522968 R 218491 CDS YP_049450.1 50120283 2882530 1523468..1523674 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo2693 SWALL:Q8ZD95 (EMBL:AJ414153) (68 aa) fasta scores: E(): 4.2e-22, 73.52% id in 68 aa, and to Salmonella typhimurium periplasmic protein ybfa or stm0708 SWALL:Q8ZQV9 (EMBL:AE008728) (68 aa) fasta scores: E(): 3.2e-20, 72.05% id in 68 aa; hypothetical protein 1523674 2882530 ECA1344 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049450.1 1523468 D 218491 CDS YP_049451.1 50120284 2882531 complement(1523818..1525473) 1 NC_004547.2 Similar to Actinobacillus pleuropneumoniae ferric transport system permease protein AfuB SWALL:AFUB_ACTPL (SWALL:Q44123) (687 aa) fasta scores: E(): 2e-26, 24.36% id in 550 aa, and to Pasteurella multocida AfuB afub_2 or pm1455 SWALL:Q9CKZ5 (EMBL:AE006182) (564 aa) fasta scores: E(): 5.6e-41, 28.39% id in 553 aa; ABC transporter permease 1525473 2882531 ECA1345 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_049451.1 1523818 R 218491 CDS YP_049452.1 50120285 2881515 complement(1525674..1526654) 1 NC_004547.2 Similar to Rhizobium meliloti periplasmic iron-binding protein AfuA or r02056 or smc04317 SWALL:Q9Z3S7 (EMBL:AF030523) (326 aa) fasta scores: E(): 2e-23, 33.12% id in 326 aa, and to Agrobacterium tumefaciens ABC transporter, substrate binding protein atu2014 or agr_c_3652 SWALL:Q8UDV5 (EMBL:AE009153) (327 aa) fasta scores: E(): 8.6e-22, 30.93% id in 320 aa; ABC transporter substrate binding protein 1526654 2881515 ECA1346 Pectobacterium atrosepticum SCRI1043 ABC transporter substrate binding protein YP_049452.1 1525674 R 218491 CDS YP_049453.1 50120286 2881516 complement(1526672..1527400) 1 NC_004547.2 Similar to Synechococcus elongatus ABC transporter ATP-binding protein tll1492 SWALL:BAC09044 (EMBL:AP005374) (373 aa) fasta scores: E(): 5.2e-35, 50.21% id in 233 aa, and to Bradyrhizobium japonicum ABC transporter ATP-binding protein bll7196 SWALL:BAC52461 (EMBL:AP005961) (365 aa) fasta scores: E(): 7.6e-35, 47.52% id in 242 aa; ABC transporter ATP-binding protein 1527400 2881516 ECA1347 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_049453.1 1526672 R 218491 CDS YP_049454.1 50120287 2881517 1527781..1528740 1 NC_004547.2 Similar to Salmonella typhi pathogenicity island protein sty1731 SWALL:Q8Z6K7 (EMBL:AL627271) (319 aa) fasta scores: E(): 2.5e-75, 58.9% id in 309 aa, and to Salmonella typhimurium orf 319 protein orf319 or stm1389 SWALL:Q9Z4T2 (EMBL:AJ224978) (319 aa) fasta scores: E(): 2.5e-75, 58.9% id in 309 aa; hypothetical protein 1528740 2881517 ECA1348 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049454.1 1527781 D 218491 CDS YP_049455.1 50120288 2883690 1528762..1530255 1 NC_004547.2 UV-induced DNA repair; converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers; light dependent; deoxyribodipyrimidine photolyase 1530255 phrB 2883690 phrB Pectobacterium atrosepticum SCRI1043 deoxyribodipyrimidine photolyase YP_049455.1 1528762 D 218491 CDS YP_049456.1 50120289 2882160 1530248..1530991 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2697 or y1272 SWALL:YQ97_YERPE (SWALL:Q8ZD91) (247 aa) fasta scores: E(): 1.6e-77, 76.92% id in 247 aa, and to Salmonella typhimurium, and Salmonella typhi hypothetical protein ybgi or stm0711 or sty0751 SWALL:YBGI_SALTY (SWALL:Q8XFW7) (247 aa) fasta scores: E(): 1.1e-71, 72.06% id in 247 aa; hydrolase-oxidase 1530991 2882160 ECA1350 Pectobacterium atrosepticum SCRI1043 hydrolase-oxidase YP_049456.1 1530248 D 218491 CDS YP_049457.1 50120290 2882161 1531148..1531804 1 NC_004547.2 Similar to Salmonella typhimurium carboxylase ybgj or stm0712 SWALL:Q8ZQV8 (EMBL:AE008729) (218 aa) fasta scores: E(): 1.1e-61, 72.93% id in 218 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein ybgj or b0711 or z0862 or ecs0736 SWALL:YBGJ_ECOLI (SWALL:P75744) (218 aa) fasta scores: E(): 2.3e-60, 71.56% id in 218 aa; allophanate hydrolase subunit 1 1531804 2882161 ECA1351 Pectobacterium atrosepticum SCRI1043 allophanate hydrolase subunit 1 YP_049457.1 1531148 D 218491 CDS YP_049458.1 50120291 2882162 1531798..1532742 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2699 ypo2699 or y1275 SWALL:AAM84849 (EMBL:AJ414153) (316 aa) fasta scores: E(): 3.6e-83, 69.13% id in 311 aa, and to Escherichia coli hypothetical protein ybgk ybgk or b0712 SWALL:YBGK_ECOLI (SWALL:P75745) (310 aa) fasta scores: E(): 2.6e-79, 64.21% id in 313 aa; allophanate hydrolase subunit 2 1532742 2882162 ECA1352 Pectobacterium atrosepticum SCRI1043 allophanate hydrolase subunit 2 YP_049458.1 1531798 D 218491 CDS YP_049459.1 50120292 2881243 1532732..1533469 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo2700 SWALL:Q8ZD89 (EMBL:AJ414153) (245 aa) fasta scores: E(): 8e-68, 73.77% id in 244 aa, and to Shigella flexneri lactam utilization protein ybgl or sf0584 SWALL:AAN42227 (EMBL:AE015089) (244 aa) fasta scores: E(): 1e-59, 66.8% id in 244 aa; LamB/YcsF family protein 1533469 2881243 ECA1353 Pectobacterium atrosepticum SCRI1043 LamB/YcsF family protein YP_049459.1 1532732 D 218491 CDS YP_049460.1 50120293 2881376 1533499..1534146 1 NC_004547.2 Similar to Pseudomonas fluorescens pyrrolidone-carboxylate peptidase Pcp SWALL:PCP_PSEFL (SWALL:P42673) (213 aa) fasta scores: E(): 3.4e-37, 53.99% id in 213 aa, and to Bacillus amyloliquefaciens pyrrolidone-carboxylate peptidase Pcp SWALL:PCP_BACAM (SWALL:P46107) (215 aa) fasta scores: E(): 2.6e-36, 48.13% id in 214 aa; pyrrolidone-carboxylate peptidase 1534146 pcp 2881376 pcp Pectobacterium atrosepticum SCRI1043 pyrrolidone-carboxylate peptidase YP_049460.1 1533499 D 218491 CDS YP_049461.1 50120294 2885656 1534199..1534990 1 NC_004547.2 5-formyluracil/5-hydroxymethyluracil DNA glycosylase; involved in base excision repair of DNA damaged by oxidation or by mutagenic agents; acts as DNA glycosylase that recognizes and removes damaged bases with a preference for oxidized pyrimidines; has apurinic/apyrimidinic lyase activity; endonuclease VIII 1534990 nei 2885656 nei Pectobacterium atrosepticum SCRI1043 endonuclease VIII YP_049461.1 1534199 D 218491 CDS YP_049462.1 50120295 2881964 complement(1535069..1536355) 1 NC_004547.2 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 1536355 gltA 2881964 gltA Pectobacterium atrosepticum SCRI1043 type II citrate synthase YP_049462.1 1535069 R 218491 CDS YP_049463.1 50120296 2884415 1537007..1537396 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 succinate dehydrogenase cytochrome b-556 subunit SdhC or CybA or b0721 or z0875 or ecs0746 SWALL:DHSC_ECOLI (SWALL:P10446) (129 aa) fasta scores: E(): 1.1e-38, 79.06% id in 129 aa; succinate dehydrogenase cytochrome b556 large membrane subunit 1537396 sdhC 2884415 sdhC Pectobacterium atrosepticum SCRI1043 succinate dehydrogenase cytochrome b556 large membrane subunit YP_049463.1 1537007 D 218491 CDS YP_049464.1 50120297 2884416 1537390..1537737 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri succinate dehydrogenase hydrophobic membrane anchor protein SdhD or b0722 or c0800 or sf0575 SWALL:DHSD_ECOLI (SWALL:P10445) (115 aa) fasta scores: E(): 2.2e-34, 77.19% id in 114 aa; succinate dehydrogenase cytochrome b556 small membrane subunit 1537737 sdhD 2884416 sdhD Pectobacterium atrosepticum SCRI1043 succinate dehydrogenase cytochrome b556 small membrane subunit YP_049464.1 1537390 D 218491 CDS YP_049465.1 50120298 2884419 1537737..1539503 1 NC_004547.2 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; succinate dehydrogenase flavoprotein subunit 1539503 sdhA 2884419 sdhA Pectobacterium atrosepticum SCRI1043 succinate dehydrogenase flavoprotein subunit YP_049465.1 1537737 D 218491 CDS YP_049466.1 50120299 2884414 1539520..1540236 1 NC_004547.2 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; succinate dehydrogenase iron-sulfur subunit 1540236 sdhB 2884414 sdhB Pectobacterium atrosepticum SCRI1043 succinate dehydrogenase iron-sulfur subunit YP_049466.1 1539520 D 218491 CDS YP_049467.1 50120300 2884343 1540513..1543320 1 NC_004547.2 SucA; E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate; SucA catalyzes the reaction of 2-oxoglutarate with dihydrolipoamide succinyltransferase-lipoate to form dihydrolipoamide succinyltransferase-succinyldihydrolipoate and carbon dioxide; 2-oxoglutarate dehydrogenase E1 1543320 sucA 2884343 sucA Pectobacterium atrosepticum SCRI1043 2-oxoglutarate dehydrogenase E1 YP_049467.1 1540513 D 218491 CDS YP_049468.1 50120301 2884338 1543336..1544562 1 NC_004547.2 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; dihydrolipoamide succinyltransferase 1544562 sucB 2884338 sucB Pectobacterium atrosepticum SCRI1043 dihydrolipoamide succinyltransferase YP_049468.1 1543336 D 218491 CDS YP_049469.1 50120302 2884339 1544898..1546064 1 NC_004547.2 catalyzes the interconversion of succinyl-CoA and succinate; succinyl-CoA synthetase subunit beta 1546064 sucC 2884339 sucC Pectobacterium atrosepticum SCRI1043 succinyl-CoA synthetase subunit beta YP_049469.1 1544898 D 218491 CDS YP_049470.1 50120303 2884340 1546064..1546936 1 NC_004547.2 Catalyzes the only substrate-level phosphorylation in the TCA cycle; succinyl-CoA synthetase subunit alpha 1546936 sucD 2884340 sucD Pectobacterium atrosepticum SCRI1043 succinyl-CoA synthetase subunit alpha YP_049470.1 1546064 D 218491 CDS YP_049471.1 50120304 2883099 1547669..1549237 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri cytochrome D ubiquinol oxidase subunit I CydA or Cyd-1 or b0733 or c0811 or sf0564 SWALL:CYDA_ECOLI (SWALL:P11026) (522 aa) fasta scores: E(): 2.3e-178, 83.9% id in 522 aa; cytochrome D ubiquinol oxidase subunit I 1549237 cydA1 2883099 cydA1 Pectobacterium atrosepticum SCRI1043 cytochrome D ubiquinol oxidase subunit I YP_049471.1 1547669 D 218491 CDS YP_049472.1 50120305 2883050 1549251..1550390 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 cytochrome D ubiquinol oxidase subunit II CydB or Cyd-2 or b0734 or c0812 or z0901 or ecs0769 SWALL:CYDB_ECOLI (SWALL:P11027) (379 aa) fasta scores: E(): 4.4e-123, 80.21% id in 379 aa; cytochrome D ubiquinol oxidase subunit II 1550390 cydB1 2883050 cydB1 Pectobacterium atrosepticum SCRI1043 cytochrome D ubiquinol oxidase subunit II YP_049472.1 1549251 D 218491 CDS YP_049473.1 50120306 2881244 1550407..1550523 1 NC_004547.2 Similar to Erwinia chrysanthemi YbgT protein SWALL:Q937K9 (EMBL:AJ297885) (38 aa) fasta scores: E(): 3.5e-11, 76.31% id in 38 aa, and to Escherichia coli protein YbgT or b0734.1 SWALL:YBGT_ECOLI (SWALL:P56100) (37 aa) fasta scores: E(): 2.5e-10, 75% id in 36 aa; hypothetical protein 1550523 2881244 ECA1367 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049473.1 1550407 D 218491 CDS YP_049474.1 50120307 2881245 1550520..1550813 1 NC_004547.2 Similar to Erwinia chrysanthemi YbgE protein SWALL:Q937K8 (EMBL:AJ297885) (97 aa) fasta scores: E(): 1.7e-31, 79.16% id in 96 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri protein YbgE or b0735 or c0814 or z0903 or ecs0770 or sf0562 SWALL:YBGE_ECOLI (SWALL:P37343) (97 aa) fasta scores: E(): 4.2e-26, 63.54% id in 96 aa; hypothetical protein 1550813 2881245 ECA1368 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049474.1 1550520 D 218491 CDS YP_049475.1 50120308 2881246 1550947..1551351 1 NC_004547.2 catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters; physiological role remains unknown; involved in phospholipid metabolism; part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components; acyl-CoA thioester hydrolase 1551351 2881246 ECA1369 Pectobacterium atrosepticum SCRI1043 acyl-CoA thioester hydrolase YP_049475.1 1550947 D 218491 CDS YP_049476.1 50120309 2884263 1551348..1552034 1 NC_004547.2 membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolQ 1552034 tolQ 2884263 tolQ Pectobacterium atrosepticum SCRI1043 colicin uptake protein TolQ YP_049476.1 1551348 D 218491 CDS YP_049477.1 50120310 2884264 1552047..1552472 1 NC_004547.2 membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; colicin uptake protein TolR 1552472 tolR 2884264 tolR Pectobacterium atrosepticum SCRI1043 colicin uptake protein TolR YP_049477.1 1552047 D 218491 CDS YP_049478.1 50120311 2884266 1552537..1553724 1 NC_004547.2 inner membrane component of 7 member Tol-Pal envelope-spanning complex; involved in maintaining cell envelope integrity; utilized by colicins and filamentous phages for import; interacts with TolB, Pal, and through TolB to various outer membrane porins; cell envelope integrity inner membrane protein TolA 1553724 tolA 2884266 tolA Pectobacterium atrosepticum SCRI1043 cell envelope integrity inner membrane protein TolA YP_049478.1 1552537 D 218491 CDS YP_049479.1 50120312 2884267 1553863..1555155 1 NC_004547.2 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 1555155 tolB 2884267 tolB Pectobacterium atrosepticum SCRI1043 translocation protein TolB YP_049479.1 1553863 D 218491 CDS YP_049480.1 50120313 2881734 1555196..1555705 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri peptidoglycan-associated lipoprotein precursor pal or excc or b0741 or z0909 or ecs0776 or sf0556 SWALL:PAL_ECOLI (SWALL:P07176) (173 aa) fasta scores: E(): 3.1e-50, 81.5% id in 173 aa; peptidoglycan-associated outer membrane lipoprotein 1555705 pal 2881734 pal Pectobacterium atrosepticum SCRI1043 peptidoglycan-associated outer membrane lipoprotein YP_049480.1 1555196 D 218491 CDS YP_049481.1 50120314 2881307 1555715..1556491 1 NC_004547.2 periplasmic protein that interacts with TolA; the tol-pal system is probably involved in maintaining cell envelope integrity; tol-pal system protein YbgF 1556491 2881307 ECA1375 Pectobacterium atrosepticum SCRI1043 tol-pal system protein YbgF YP_049481.1 1555715 D 218491 CDS YP_049482.1 50120315 2881308 1557428..1558144 1 NC_004547.2 Similar to Shigella flexneri transport protein yqga or sf2963 SWALL:AAN44444 (EMBL:AE015309) (235 aa) fasta scores: E(): 1.5e-36, 45.79% id in 238 aa, and to Escherichia coli hypothetical protein yqga or b2966 SWALL:YQGA_ECOLI (SWALL:Q46831) (235 aa) fasta scores: E(): 2.3e-36, 45.79% id in 238 aa; hypothetical protein 1558144 2881308 ECA1376 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049482.1 1557428 D 218491 CDS YP_049483.1 50120316 2881309 complement(1558159..1558557) 1 NC_004547.2 Similar to Escherichia coli hypothetical protein yjaa or b4011 SWALL:YJAA_ECOLI (SWALL:P09162) (127 aa) fasta scores: E(): 2.2e-05, 28.57% id in 126 aa, and to Yersinia pestis membrane protein ypo0760 or y3434 SWALL:AAM86983 (EMBL:AJ414144) (137 aa) fasta scores: E(): 0.00023, 32.79% id in 125 aa; hypothetical protein 1558557 2881309 ECA1377 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049483.1 1558159 R 218491 CDS YP_049484.1 50120317 2885165 1558773..1559834 1 NC_004547.2 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 1559834 nadA 2885165 nadA Pectobacterium atrosepticum SCRI1043 quinolinate synthetase YP_049484.1 1558773 D 218491 CDS YP_049485.1 50120318 2883188 1559893..1560618 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri protein PnuC or b0751 or sf0553 SWALL:PNUC_ECOLI (SWALL:P31215) (239 aa) fasta scores: E(): 2.9e-72, 73.64% id in 239 aa, and to Salmonella typhimurium protein PnuC or stm0757 SWALL:PNUC_SALTY (SWALL:P24520) (239 aa) fasta scores: E(): 3e-74, 76.05% id in 238 aa; nicotinamide mononucleotide transport protein 1560618 pnuC 2883188 pnuC Pectobacterium atrosepticum SCRI1043 nicotinamide mononucleotide transport protein YP_049485.1 1559893 D 218491 CDS YP_049486.1 50120319 2882479 complement(1560626..1561588) 1 NC_004547.2 involved in zinc efflux across the cytoplasmic membrane; zinc transporter ZitB 1561588 zitB 2882479 zitB Pectobacterium atrosepticum SCRI1043 zinc transporter ZitB YP_049486.1 1560626 R 218491 CDS YP_049487.1 50120320 2884130 1561884..1562939 1 NC_004547.2 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 1562939 aroG 2884130 aroG Pectobacterium atrosepticum SCRI1043 phospho-2-dehydro-3-deoxyheptonate aldolase YP_049487.1 1561884 D 218491 CDS YP_049488.1 50120321 2885502 complement(1563014..1563766) 1 NC_004547.2 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; phosphoglyceromutase 1563766 gpmA 2885502 gpmA Pectobacterium atrosepticum SCRI1043 phosphoglyceromutase YP_049488.1 1563014 R 218491 CDS YP_049489.1 50120322 2883446 complement(1563904..1567041) 1 NC_004547.2 Similar to Escherichia coli cation efflux system protein CusA or b0575 SWALL:CUSA_ECOLI (SWALL:P38054) (1047 aa) fasta scores: E(): 0, 65.54% id in 1042 aa; cation efflux system protein 1567041 cusA 2883446 cusA Pectobacterium atrosepticum SCRI1043 cation efflux system protein YP_049489.1 1563904 R 218491 CDS YP_049490.1 50120323 2883447 complement(1567038..1568519) 1 NC_004547.2 Similar to Escherichia coli copper efflux system protein CusB precursor CusB or b0574 SWALL:CUSB_ECOLI (SWALL:P77239) (407 aa) fasta scores: E(): 8.2e-44, 37.94% id in 398 aa; copper efflux system protein 1568519 cusB 2883447 cusB Pectobacterium atrosepticum SCRI1043 copper efflux system protein YP_049490.1 1567038 R 218491 CDS YP_049491.1 50120324 2885267 complement(1568546..1569805) 1 NC_004547.2 Similar to Alcaligenes eutrophus nickel and cobalt resistance protein CnrC precursor SWALL:CNRC_ALCEU (SWALL:P37974) (418 aa) fasta scores: E(): 1.4e-05, 23.51% id in 404 aa, and to Pseudomonas putida heavy metal Rnd efflux outer membrane protein, czcc family pp5385 SWALL:AAN70950 (EMBL:AE016794) (417 aa) fasta scores: E(): 1.5e-28, 32.61% id in 417 aa; hypothetical protein 1569805 2885267 ECA1385 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049491.1 1568546 R 218491 CDS YP_049492.1 50120325 2885268 complement(1569818..1570168) 1 NC_004547.2 Similar to Escherichia coli hypothetical protein CusX precursor CusX or b0573 SWALL:CUSX_ECOLI (SWALL:P77214) (110 aa) fasta scores: E(): 1.5e-06, 35.13% id in 111 aa, and to Shigella flexneri orf, conserved hypothetical protein ylcc or sf0474 SWALL:AAN42127 (EMBL:AE015079) (110 aa) fasta scores: E(): 1.5e-06, 35.13% id in 111 aa; hypothetical protein 1570168 2885268 ECA1386 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049492.1 1569818 R 218491 CDS YP_049493.1 50120326 2885269 complement(1570244..1570696) 1 NC_004547.2 Similar to Ralstonia solanacearum hypothetical transmembrane protein rsp0925 or rs05408 SWALL:Q8XRD3 (EMBL:AL646081) (136 aa) fasta scores: E(): 0.11, 26.57% id in 143 aa; hypothetical protein 1570696 2885269 ECA1387 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049493.1 1570244 R 218491 CDS YP_049494.1 50120327 2883097 complement(1570848..1571894) 1 NC_004547.2 catalyzes the conversion of alpha-aldose to the beta-anomer; active on D-glucose, L-arabinose, D-xylose, D-galactose, maltose and lactose; links the metabolism of lactose and galactose; aldose 1-epimerase 1571894 galM 2883097 galM Pectobacterium atrosepticum SCRI1043 aldose 1-epimerase YP_049494.1 1570848 R 218491 CDS YP_049495.1 50120328 2883164 complement(1572017..1573036) 1 NC_004547.2 Similar to Escherichia coli udp-glucose 4-epimerase GalE or GalD or b0759 SWALL:GALE_ECOLI (SWALL:P09147) (338 aa) fasta scores: E(): 5.5e-102, 76.03% id in 338 aa; UDP-galactose-4-epimerase 1573036 galE 2883164 galE Pectobacterium atrosepticum SCRI1043 UDP-galactose-4-epimerase YP_049495.1 1572017 R 218491 CDS YP_049496.1 50120329 2881249 complement(1573235..1574710) 1 NC_004547.2 contains 2 ATP-binding cassettes; involved in the transport of molybdenum; molybdenum transport ATP-binding protein ModF 1574710 modF 2881249 modF Pectobacterium atrosepticum SCRI1043 molybdenum transport ATP-binding protein ModF YP_049496.1 1573235 R 218491 CDS YP_049497.1 50120330 2881248 complement(1574770..1575561) 1 NC_004547.2 represses the modABCD operon and activates the moaABCD and napFDAGHBC operons; DNA-binding transcriptional regulator ModE 1575561 modE 2881248 modE Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional regulator ModE YP_049497.1 1574770 R 218491 CDS YP_049498.1 50120331 2885808 complement(1575643..1575957) 1 NC_004547.2 no significant database matches; hypothetical protein 1575957 2885808 ECA1392 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049498.1 1575643 R 218491 CDS YP_049499.1 50120332 2885451 1576123..1576893 1 NC_004547.2 with ModCB is involved in the high-affinity transport of molybdate; molybdate transporter periplasmic protein 1576893 modA 2885451 modA Pectobacterium atrosepticum SCRI1043 molybdate transporter periplasmic protein YP_049499.1 1576123 D 218491 CDS YP_049500.1 50120333 2885452 1576893..1577582 1 NC_004547.2 part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; molybdate ABC transporter permease 1577582 modB 2885452 modB Pectobacterium atrosepticum SCRI1043 molybdate ABC transporter permease YP_049500.1 1576893 D 218491 CDS YP_049501.1 50120334 2881247 1577582..1578640 1 NC_004547.2 Part of the ABC transporter complex modABC involved in molybdenum import; molybdate transporter ATP-binding protein 1578640 modC 2881247 modC Pectobacterium atrosepticum SCRI1043 molybdate transporter ATP-binding protein YP_049501.1 1577582 D 218491 CDS YP_049502.1 50120335 2885809 1578878..1579741 1 NC_004547.2 Similar to Agrobacterium tumefaciens hypothetical protein atu4376 or agr_l_982 SWALL:Q8U7S3 (EMBL:AE009366) (284 aa) fasta scores: E(): 2e-44, 43.5% id in 285 aa, and to Rhizobium meliloti hypothetical protein r01924 or smc04254 SWALL:Q92P69 (EMBL:AL591788) (253 aa) fasta scores: E(): 6.9e-22, 32.63% id in 239 aa; hypothetical protein 1579741 2885809 ECA1396 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049502.1 1578878 D 218491 CDS YP_049503.1 50120336 2885810 complement(1579820..1580800) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri ribose operon repressor RbsR or b3753 or c4681 or z5254 or ecs4695 or sf3836 SWALL:RBSR_ECOLI (SWALL:P25551) (329 aa) fasta scores: E(): 6.6e-29, 32.82% id in 329 aa, and to Thermoanaerobacter tengcongensis transcriptional regulator PurR8 or tte1952 SWALL:Q8R8P3 (EMBL:AE013146) (331 aa) fasta scores: E(): 1.5e-43, 41.28% id in 327 aa; LacI family transcriptional regulator 1580800 2885810 ECA1397 Pectobacterium atrosepticum SCRI1043 LacI family transcriptional regulator YP_049503.1 1579820 R 218491 CDS YP_049504.1 50120337 2885143 complement(1580925..1582076) 1 NC_004547.2 Similar to Bacillus halodurans hypothetical protein Bh0710 bh0710 SWALL:Q9KEY9 (EMBL:AP001509) (388 aa) fasta scores: E(): 9e-27, 28.78% id in 396 aa, and to Streptomyces coelicolor oxidoreductase sco6988 or sc8f11.14C SWALL:Q9KZG4 (EMBL:AL939129) (387 aa) fasta scores: E(): 1e-20, 29.23% id in 390 aa; oxidoreductase 1582076 2885143 ECA1398 Pectobacterium atrosepticum SCRI1043 oxidoreductase YP_049504.1 1580925 R 218491 CDS YP_049505.1 50120338 2885144 complement(1582073..1583143) 1 NC_004547.2 Similar to Agrobacterium tumefaciens hypothetical protein atu4374 or agr_l_986 SWALL:Q8U7S5 (EMBL:AE009366) (349 aa) fasta scores: E(): 4.3e-104, 67.42% id in 350 aa, and to Caulobacter crescentus hypothetical protein Cc1631 SWALL:Q9A7T9 (EMBL:AE005838) (351 aa) fasta scores: E(): 5.1e-102, 68.09% id in 351 aa; hypothetical protein 1583143 2885144 ECA1399 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049505.1 1582073 R 218491 CDS YP_049506.1 50120339 2885145 complement(1583277..1584521) 1 NC_004547.2 Similar to Escherichia coli nucleoside transporter YegT or b2098 SWALL:YEGT_ECOLI (SWALL:P76417) (425 aa) fasta scores: E(): 7e-56, 38.47% id in 408 aa, and to Salmonella typhimurium, and Salmonella typhi mfs family transport protein YegT or stm2142 or sty2371 SWALL:Q8XEM8 (EMBL:AE008795) (423 aa) fasta scores: E(): 1.1e-55, 39.11% id in 409 aa; nucleoside H+ symporter 1584521 2885145 ECA1400 Pectobacterium atrosepticum SCRI1043 nucleoside H+ symporter YP_049506.1 1583277 R 218491 CDS YP_049507.1 50120340 2881758 1584709..1585674 1 NC_004547.2 catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase 1585674 glk 2881758 glk Pectobacterium atrosepticum SCRI1043 glucokinase YP_049507.1 1584709 D 218491 CDS YP_049508.1 50120341 2884853 complement(1585757..1586578) 1 NC_004547.2 YbhA; catalyzes the dephosphorylation of pyridoxal phosphate, fructose 1,6-bisphosphate, erythrose 4-phosphate and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; phosphotransferase activity observed when using monophosphates as phosphate donor; member of the haloacid dehalogenase-like hydrolases superfamily; phosphotransferase 1586578 2884853 ECA1402 Pectobacterium atrosepticum SCRI1043 phosphotransferase YP_049508.1 1585757 R 218491 CDS YP_049509.1 50120342 2884854 1587226..1588224 1 NC_004547.2 catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate; 6-phosphogluconolactonase 1588224 2884854 ECA1403 Pectobacterium atrosepticum SCRI1043 6-phosphogluconolactonase YP_049509.1 1587226 D 218491 CDS YP_049510.1 50120343 2884855 complement(1588340..1589590) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1516 or y2652 SWALL:Q8ZG04 (EMBL:AJ414148) (418 aa) fasta scores: E(): 7e-158, 89.53% id in 411 aa, and to Bradyrhizobium japonicum Bll5694 protein bll5694 SWALL:BAC50959 (EMBL:AP005955) (441 aa) fasta scores: E(): 1e-80, 46.95% id in 411 aa; hypothetical protein 1589590 2884855 ECA1404 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049510.1 1588340 R 218491 CDS YP_049511.1 50120344 2884856 complement(1589605..1590681) 1 NC_004547.2 Similar to Yersinia pestis sugar ABC transporter ypo1517 or y2651 SWALL:Q8ZG03 (EMBL:AJ414148) (363 aa) fasta scores: E(): 3.6e-111, 84.07% id in 358 aa, and to Rhizobium loti ABC transporter binding protein mlr7288 SWALL:Q986M5 (EMBL:AP003011) (340 aa) fasta scores: E(): 1.4e-24, 31.88% id in 345 aa; hypothetical protein 1590681 2884856 ECA1405 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049511.1 1589605 R 218491 CDS YP_049512.1 50120345 2883034 complement(1591099..1591734) 1 NC_004547.2 nitrate-inducible, cytochrome b556(fdn) component of formate dehydrogenase; formate dehydrogenase-N subunit gamma 1591734 fdnI 2883034 fdnI Pectobacterium atrosepticum SCRI1043 formate dehydrogenase-N subunit gamma YP_049512.1 1591099 R 218491 CDS YP_049513.1 50120346 2883033 complement(1591727..1592635) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri formate dehydrogenase, nitrate-inducible, iron-sulfur subunit FdnH or b1475 or sf1750 SWALL:FDNH_ECOLI (SWALL:P24184) (294 aa) fasta scores: E(): 1.1e-98, 81.63% id in 294 aa; formate dehydrogenase, nitrate-inducible, iron-sulfur subunit 1592635 fdnH 2883033 fdnH Pectobacterium atrosepticum SCRI1043 formate dehydrogenase, nitrate-inducible, iron-sulfur subunit YP_049513.1 1591727 R 218491 CDS YP_049514.1 50120347 2883038 complement(1592648..1595695) 1 NC_004547.2 Similar to Escherichia coli formate dehydrogenase, nitrate-inducible, major subunit FdnG or b1474 SWALL:FDNG_ECOLI (SWALL:P24183) (1015 aa) fasta scores: E(): 0, 69.75% id in 1015 aa; formate dehydrogenase, nitrate-inducible, major subunit 1595695 fdnG 2883038 fdnG Pectobacterium atrosepticum SCRI1043 formate dehydrogenase, nitrate-inducible, major subunit YP_049514.1 1592648 R 218491 CDS YP_049515.1 50120348 2883949 complement(1595975..1598005) 1 NC_004547.2 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1598005 metG 2883949 metG Pectobacterium atrosepticum SCRI1043 methionyl-tRNA synthetase YP_049515.1 1595975 R 218491 CDS YP_049516.1 50120349 2884606 1598229..1599338 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 Mrp protein Mrp or b2113 or c2641 SWALL:MRP_ECOLI (SWALL:P21590) (369 aa) fasta scores: E(): 1.6e-109, 78.86% id in 369 aa, and to Shigella flexneri ATPase Mrp or sf2178 SWALL:AAN43707 (EMBL:AE015233) (379 aa) fasta scores: E(): 3.1e-109, 78.59% id in 369 aa; ATPase 1599338 2884606 ECA1410 Pectobacterium atrosepticum SCRI1043 ATPase YP_049516.1 1598229 D 218491 CDS YP_049517.1 50120350 2884212 1599518..1600159 1 NC_004547.2 functions in pyrimidine salvage; pyrimidine ribonucleoside kinase; phosphorylates nucleosides or dinucleosides to make UMP or CMP using ATP or GTP as the donor; uridine kinase 1600159 udk 2884212 udk Pectobacterium atrosepticum SCRI1043 uridine kinase YP_049517.1 1599518 D 218491 CDS YP_049518.1 50120351 2884899 1600255..1600836 1 NC_004547.2 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 1600836 dcd 2884899 dcd Pectobacterium atrosepticum SCRI1043 deoxycytidine triphosphate deaminase YP_049518.1 1600255 D 218491 CDS YP_049519.1 50120352 2884109 1600900..1602735 1 NC_004547.2 YegA; inner membrane protein involved in the assembly of outer membrane proteins (OMPs); asmA-null mutants show low lipopolysaccharide (LPS) levels, suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity, resulting on altered assembly of OMPs; assembly protein 1602735 asmA 2884109 asmA Pectobacterium atrosepticum SCRI1043 assembly protein YP_049519.1 1600900 D 218491 CDS YP_049520.1 50120353 2884844 1603000..1604352 1 NC_004547.2 responsible for the transport of C4-dicarboxylates during anaerobic growth; C4-dicarboxylate transporter DcuC 1604352 dcuC 2884844 dcuC Pectobacterium atrosepticum SCRI1043 C4-dicarboxylate transporter DcuC YP_049520.1 1603000 D 218491 CDS YP_049521.1 50120354 2884607 complement(1604432..1606018) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo1527 SWALL:Q8ZFZ6 (EMBL:AJ414148) (528 aa) fasta scores: E(): 2.8e-151, 74.05% id in 528 aa, and to Escherichia coli hypothetical protein yegh or b2063 SWALL:YEGH_ECOLI (SWALL:P76389) (527 aa) fasta scores: E(): 1e-139, 69.18% id in 529 aa; hypothetical protein 1606018 2884607 ECA1415 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049521.1 1604432 R 218491 CDS YP_049522.1 50120355 2884608 1606718..1607845 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase WecA or Rfe or b3784 or c4704 or sf3858 SWALL:WECA_ECOLI (SWALL:P24235) (367 aa) fasta scores: E(): 3e-70, 52.18% id in 343 aa; undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase 1607845 2884608 ECA1416 Pectobacterium atrosepticum SCRI1043 undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase YP_049522.1 1606718 D 218491 CDS YP_049523.1 50120356 2882658 1607969..1609105 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 polysaccharide export protein Wza precursor Wza or b2062 or z3227 or ecs2867 SWALL:WZA_ECOLI (SWALL:P76388) (379 aa) fasta scores: E(): 3.3e-105, 68.86% id in 379 aa; polysaccharide export protein 1609105 wza 2882658 wza Pectobacterium atrosepticum SCRI1043 polysaccharide export protein YP_049523.1 1607969 D 218491 CDS YP_049524.1 50120357 2882653 1609114..1609548 1 NC_004547.2 Similar to Salmonella typhimurium low molecular weight protein-tyrosine-phosphatase Wzb or stm2117 SWALL:WZB_SALTY (SWALL:Q9F7B2) (149 aa) fasta scores: E(): 1.5e-34, 65.73% id in 143 aa, and to Erwinia amylovora probable low molecular weight protein-tyrosine-phosphatase AmsI SWALL:AMSI_ERWAM (SWALL:Q46630) (144 aa) fasta scores: E(): 5.8e-37, 69.44% id in 144 aa; protein-tyrosine-phosphatase 1609548 wzb 2882653 wzb Pectobacterium atrosepticum SCRI1043 protein-tyrosine-phosphatase YP_049524.1 1609114 D 218491 CDS YP_049525.1 50120358 2882654 1609565..1611733 1 NC_004547.2 Wzc; catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid (an extracellular polysaccharide); tyrosine kinase 1611733 wzc 2882654 wzc Pectobacterium atrosepticum SCRI1043 tyrosine kinase YP_049525.1 1609565 D 218491 CDS YP_049526.1 50120359 2885193 1611941..1613374 1 NC_004547.2 Similar to Salmonella typhimurium undecaprenyl-phosphate galactosephosphotransferase RfbP or stm2082 SWALL:RFBP_SALTY (SWALL:P26406) (476 aa) fasta scores: E(): 3e-129, 64.65% id in 464 aa, and to Erwinia amylovora UDP-galactose-lipid carrier transferase amsG SWALL:AMSG_ERWAM (SWALL:Q46628) (477 aa) fasta scores: E(): 2.8e-131, 66.3% id in 466 aa; undecaprenyl-phosphate galactosephosphotransferase 1613374 rfbP 2885193 rfbP Pectobacterium atrosepticum SCRI1043 undecaprenyl-phosphate galactosephosphotransferase YP_049526.1 1611941 D 218491 CDS YP_049527.1 50120360 2885158 1613498..1614457 1 NC_004547.2 catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose; CDP-6-deoxy-delta-3,4-glucoseen reductase 1614457 rfbI 2885158 rfbI Pectobacterium atrosepticum SCRI1043 CDP-6-deoxy-delta-3,4-glucoseen reductase YP_049527.1 1613498 D 218491 CDS YP_049528.1 50120361 2885123 1614552..1615325 1 NC_004547.2 Similar to Yersinia pestis, and Yersinia pseudotuberculosis glucose-1-phosphate cytidylyltransferase DdhA or ypo3115 or y1068 SWALL:AAN23053 (EMBL:AJ414155) (261 aa) fasta scores: E(): 1.9e-88, 80.54% id in 257 aa, and to Salmonella typhimurium glucose-1-phosphate cytidylyltransferase RfbF or stm2092 SWALL:RFBF_SALTY (SWALL:P26396) (257 aa) fasta scores: E(): 4.3e-86, 78.2% id in 257 aa; glucose-1-phosphate cytidylyltransferase 1615325 rfbF 2885123 rfbF Pectobacterium atrosepticum SCRI1043 glucose-1-phosphate cytidylyltransferase YP_049528.1 1614552 D 218491 CDS YP_049529.1 50120362 2885124 1615316..1616422 1 NC_004547.2 Similar to Salmonella typhimurium CDP-glucose 4,6-dehydratase RfbG or stm2091 SWALL:RFBG_SALTY (SWALL:P26397) (359 aa) fasta scores: E(): 5e-105, 68.92% id in 354 aa, and to Yersinia pseudotuberculosis cdp-glucose-4,6-dehydratase DdhB SWALL:Q8GJ99 (EMBL:AF461768) (391 aa) fasta scores: E(): 2.4e-111, 71.19% id in 361 aa; CDP-glucose 4,6-dehydratase 1616422 rfbG 2885124 rfbG Pectobacterium atrosepticum SCRI1043 CDP-glucose 4,6-dehydratase YP_049529.1 1615316 D 218491 CDS YP_049530.1 50120363 2885125 1616422..1617735 1 NC_004547.2 Similar to Salmonella typhimurium lipopolysaccharide biosynthesis protein RfbH or stm2090 SWALL:RFBH_SALTY (SWALL:P26398) (437 aa) fasta scores: E(): 3.5e-143, 78.94% id in 437 aa, and to Yersinia pestis CDP-4-keto-6-deoxy-D-glucose-3-dehydratase DdhC or ypo3113 SWALL:Q9RCD0 (EMBL:AJ251713) (437 aa) fasta scores: E(): 2.7e-142, 78.26% id in 437 aa; CDP-4-keto-6-deoxy-D-glucose-3-dehydratase 1617735 rfbH 2885125 rfbH Pectobacterium atrosepticum SCRI1043 CDP-4-keto-6-deoxy-D-glucose-3-dehydratase YP_049530.1 1616422 D 218491 CDS YP_049531.1 50120364 2885419 1617930..1618712 1 NC_004547.2 Similar to Escherichia coli 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase HpcH or HpaI SWALL:HPAI_ECOLI (SWALL:Q47098) (262 aa) fasta scores: E(): 4.9e-22, 32.4% id in 250 aa; 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 1618712 hpcH 2885419 hpcH Pectobacterium atrosepticum SCRI1043 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase YP_049531.1 1617930 D 218491 CDS YP_049532.1 50120365 2884569 1618722..1620518 1 NC_004547.2 Similar to Bacillus subtilis acetolactate synthase large subunit IlvB SWALL:ILVB_BACSU (SWALL:P37251) (573 aa) fasta scores: E(): 5.9e-45, 32.32% id in 563 aa; thiamine pyrophosphate enzyme 1620518 2884569 ECA1426 Pectobacterium atrosepticum SCRI1043 thiamine pyrophosphate enzyme YP_049532.1 1618722 D 218491 CDS YP_049533.1 50120366 2884570 1620524..1621459 1 NC_004547.2 Similar to Leptospira interrogans dTDP-glucose 4,6-dehydratase RfbB1 or la0235 SWALL:AAN47434 (EMBL:AE011212) (321 aa) fasta scores: E(): 0.0023, 23.05% id in 321 aa, and to Pyrococcus horikoshii 306aa long hypothetical UDP-glucose 4-epimerase ph1742 SWALL:O59375 (EMBL:AP000007) (306 aa) fasta scores: E(): 0.011, 28.63% id in 213 aa; dTDP-glucose 4,6-dehydratase 1621459 2884570 ECA1427 Pectobacterium atrosepticum SCRI1043 dTDP-glucose 4,6-dehydratase YP_049533.1 1620524 D 218491 CDS YP_049534.1 50120367 2884611 1621487..1622377 1 NC_004547.2 catalyzes the formation of acetyl-CoA from acetalaldehyde; acetaldehyde dehydrogenase 1622377 nahO 2884611 nahO Pectobacterium atrosepticum SCRI1043 acetaldehyde dehydrogenase YP_049534.1 1621487 D 218491 CDS YP_049535.1 50120368 2884610 1622382..1623413 1 NC_004547.2 catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; 4-hydroxy-2-ketovalerate aldolase 1623413 nahM 2884610 nahM Pectobacterium atrosepticum SCRI1043 4-hydroxy-2-ketovalerate aldolase YP_049535.1 1622382 D 218491 CDS YP_049536.1 50120369 2884571 1623416..1624471 1 NC_004547.2 Similar to Cicer arietinum dTDP-glucose 4-6-dehydratase SWALL:Q9SMJ5 (EMBL:AJ275318) (346 aa) fasta scores: E(): 1.7e-10, 28.52% id in 284 aa, and to Leptospira interrogans dTDP-glucose 4,6-dehydratase RfbB4 or la1661 SWALL:AAN48860 (EMBL:AE011344) (369 aa) fasta scores: E(): 1.2e-09, 28.67% id in 279 aa; dTDP-glucose 4-6-dehydratase 1624471 2884571 ECA1430 Pectobacterium atrosepticum SCRI1043 dTDP-glucose 4-6-dehydratase YP_049536.1 1623416 D 218491 CDS YP_049537.1 50120370 2885069 1624709..1626028 1 NC_004547.2 Similar to Salmonella typhi O-antigen transporter RfbX or sty2297 SWALL:RFBX_SALTI (SWALL:Q99191) (432 aa) fasta scores: E(): 2.3e-41, 33.25% id in 418 aa, and to Yersinia pseudotuberculosis O-antigen export protein RfbX SWALL:RFBX_YERPS (SWALL:Q05347) (437 aa) fasta scores: E(): 3.6e-33, 35.66% id in 429 aa; O-antigen transporter 1626028 rfbX 2885069 rfbX Pectobacterium atrosepticum SCRI1043 O-antigen transporter YP_049537.1 1624709 D 218491 CDS YP_049538.1 50120371 2884582 1625991..1626770 1 NC_004547.2 Similar to Streptococcus agalactiae CpsI cpsI SWALL:Q9RPC3 (EMBL:AF163833) (322 aa) fasta scores: E(): 2.4e-08, 26.76% id in 213 aa, and to Chlorobium tepidum glycosyl transferase ct0919 SWALL:Q8KDX5 (EMBL:AE012857) (288 aa) fasta scores: E(): 7.9e-13, 29.48% id in 251 aa; glycosyl transferase family protein 1626770 2884582 ECA1432 Pectobacterium atrosepticum SCRI1043 glycosyl transferase family protein YP_049538.1 1625991 D 218491 CDS YP_049539.1 50120372 2884583 1626767..1627393 1 NC_004547.2 Similar to Ralstonia solanacearum acyl transferase protein rsp1012 or rs02346 SWALL:Q8XR49 (EMBL:AL646082) (170 aa) fasta scores: E(): 4.2e-11, 36.7% id in 188 aa, and to Methanococcus jannaschii hypothetical protein Mj1064 SWALL:YA64_METJA (SWALL:Q58464) (214 aa) fasta scores: E(): 5.1e-10, 31.75% id in 211 aa; acyl transferase 1627393 2884583 ECA1433 Pectobacterium atrosepticum SCRI1043 acyl transferase YP_049539.1 1626767 D 218491 CDS YP_049540.1 50120373 2884584 1627409..1628554 1 NC_004547.2 Similar to Vibrio cholerae WblE protein SWALL:O87161 (EMBL:AB012957) (359 aa) fasta scores: E(): 2.9e-09, 26.18% id in 317 aa, and to Streptococcus thermophilus EpsG SWALL:Q56044 (EMBL:U40830) (372 aa) fasta scores: E(): 1.1e-08, 26.85% id in 324 aa; glycosyl transferase family protein 1628554 2884584 ECA1434 Pectobacterium atrosepticum SCRI1043 glycosyl transferase family protein YP_049540.1 1627409 D 218491 CDS YP_049541.1 50120374 2885070 1628551..1629753 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi O-antigen polymerase Rfc or stm1332 or sty1779 SWALL:RFC_SALTY (SWALL:P26479) (407 aa) fasta scores: E(): 1.4e-54, 39.58% id in 389 aa; O-antigen polymerase 1629753 rfc 2885070 rfc Pectobacterium atrosepticum SCRI1043 O-antigen polymerase YP_049541.1 1628551 D 218491 CDS YP_049542.1 50120375 2885194 1629786..1630895 1 NC_004547.2 Similar to Salmonella typhimurium RfbU protein RfbU or stm2086 SWALL:RFBU_SALTY (SWALL:P26402) (353 aa) fasta scores: E(): 2.8e-40, 45.65% id in 357 aa, and to Salmonella typhi glycosyltransferase RfbU or sty2295 SWALL:Q8Z5I8 (EMBL:AL627273) (353 aa) fasta scores: E(): 2.8e-40, 45.93% id in 357 aa; glycosyl transferase family protein 1630895 rfbU 2885194 rfbU Pectobacterium atrosepticum SCRI1043 glycosyl transferase family protein YP_049542.1 1629786 D 218491 CDS YP_049543.1 50120376 2885192 1631014..1631931 1 NC_004547.2 Similar to Salmonella typhimurium o antigen biosynthesis rhamnosyltransferase RfbN or stm2085 SWALL:RFBN_SALTY (SWALL:P26403) (314 aa) fasta scores: E(): 2.1e-53, 45.24% id in 305 aa, and to Actinobacillus pleuropneumoniae rhamnosyl transferase SWALL:Q9EYG7 (EMBL:AF329452) (303 aa) fasta scores: E(): 2.9e-54, 47.52% id in 303 aa; O antigen biosynthesis rhamnosyltransferase rfbn 1631931 rfbN 2885192 rfbN Pectobacterium atrosepticum SCRI1043 O antigen biosynthesis rhamnosyltransferase rfbn YP_049543.1 1631014 D 218491 CDS YP_049544.1 50120377 2885160 1631952..1633361 1 NC_004547.2 Similar to Escherichia coli mannose-1-phosphate guanylyltransferase ManC or CpsB or RfbM or b2049 SWALL:MANC_ECOLI (SWALL:P24174) (478 aa) fasta scores: E(): 2.1e-114, 60.88% id in 473 aa, and to Shigella flexneri mannose-1-phosphate guanyltransferase CpsB_1 or sf2112 SWALL:AAN43651 (EMBL:AE015227) (478 aa) fasta scores: E(): 5.5e-115, 61.31% id in 473 aa; mannose-1-phosphate guanylyltransferase 1633361 rfbM 2885160 rfbM Pectobacterium atrosepticum SCRI1043 mannose-1-phosphate guanylyltransferase YP_049544.1 1631952 D 218491 CDS YP_049545.1 50120378 2885159 1633374..1634744 1 NC_004547.2 Similar to Escherichia coli phosphomannomutase ManB or RfbK or RfbK2 SWALL:RFK9_ECOLI (SWALL:P37755) (456 aa) fasta scores: E(): 8.5e-137, 74.34% id in 456 aa; phosphomannomutase 1634744 rfbK 2885159 rfbK Pectobacterium atrosepticum SCRI1043 phosphomannomutase YP_049545.1 1633374 D 218491 CDS YP_049546.1 50120379 2885287 complement(1634820..1635671) 1 NC_004547.2 Similar to Escherichia coli dTDP-4-dehydrorhamnose reductase RfbD or RmlD or b2040 SWALL:RBD1_ECOLI (SWALL:P37760) (299 aa) fasta scores: E(): 8.3e-36, 41.72% id in 290 aa, and to Actinobacillus actinomycetemcomitans dTDP-4-keto-L-rhamnose reductase RmlD SWALL:Q9XDQ6 (EMBL:AB030032) (292 aa) fasta scores: E(): 4.3e-53, 51.56% id in 287 aa; dTDP-4-dehydrorhamnose reductase 1635671 rfbD 2885287 rfbD Pectobacterium atrosepticum SCRI1043 dTDP-4-dehydrorhamnose reductase YP_049546.1 1634820 R 218491 CDS YP_049547.1 50120380 2885286 complement(1635668..1636204) 1 NC_004547.2 Similar to Escherichia coli dTDP-6-deoxy-D-glucose-3,5 epimerase RmlC SWALL:AAN60457 (EMBL:AF529080) (180 aa) fasta scores: E(): 5.4e-40, 59.06% id in 171 aa, and to Salmonella typhimurium dTDP-4-dehydrorhamnose 3,5-epimerase RfbC or RmlC or stm2094 SWALL:RFBC_SALTY (SWALL:P26394) (183 aa) fasta scores: E(): 9.9e-41, 58.28% id in 175 aa; dTDP-6-deoxy-D-glucose-3,5 epimerase 1636204 rfbC 2885286 rfbC Pectobacterium atrosepticum SCRI1043 dTDP-6-deoxy-D-glucose-3,5 epimerase YP_049547.1 1635668 R 218491 CDS YP_049548.1 50120381 2885285 complement(1636206..1637078) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri glucose-1-phosphate thymidylyltransferase RffH or b3789 or sf3863 SWALL:RFFH_ECOLI (SWALL:P27831) (293 aa) fasta scores: E(): 7.2e-85, 76.22% id in 286 aa, and to Salmonella typhimurium glucose-1-phosphate thymidylyltransferase RfbA or stm2095 SWALL:RFBA_SALTY (SWALL:P26393) (292 aa) fasta scores: E(): 3.2e-76, 67.36% id in 285 aa; glucose-1-phosphate thymidylyltransferase 1637078 rfbA 2885285 rfbA Pectobacterium atrosepticum SCRI1043 glucose-1-phosphate thymidylyltransferase YP_049548.1 1636206 R 218491 CDS YP_049549.1 50120382 2883165 1637322..1638218 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 UTP--glucose-1-phosphate uridylyltransferase GalF or WcaN or b2042 or z3205 or ecs2846 SWALL:GALF_ECOLI (SWALL:P78083) (297 aa) fasta scores: E(): 7.1e-74, 65.43% id in 298 aa, and to Salmonella typhimurium, and Salmonella typhi UTP--glucose-1-phosphate uridylyltransferase GalF or stm2098 or sty2308 SWALL:GALF_SALTY (SWALL:P26390) (297 aa) fasta scores: E(): 7.1e-74, 64.43% id in 298 aa; UTP-glucose-1-phosphate uridylyltransferase 1638218 galF 2883165 galF Pectobacterium atrosepticum SCRI1043 UTP-glucose-1-phosphate uridylyltransferase YP_049549.1 1637322 D 218491 CDS YP_049550.1 50120383 2881583 1638449..1639855 1 NC_004547.2 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; 6-phosphogluconate dehydrogenase 1639855 gnd 2881583 gnd Pectobacterium atrosepticum SCRI1043 6-phosphogluconate dehydrogenase YP_049550.1 1638449 D 218491 CDS YP_049551.1 50120384 2884802 1640325..1640573 1 NC_004547.2 Similar to Vibrio parahaemolyticus hypothetical protein vp0218 SWALL:BAC58481 (EMBL:AP005073) (72 aa) fasta scores: E(): 0.015, 48.71% id in 78 aa, and to Vibrio vulnificus hypothetical protein vv10787 SWALL:Q8DE18 (EMBL:AE016799) (86 aa) fasta scores: E(): 0.58, 48.91% id in 92 aa; hypothetical protein 1640573 2884802 ECA1445 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049551.1 1640325 D 218491 CDS YP_049552.1 50120385 2884803 1640649..1641326 1 NC_004547.2 Similar to Vibrio cholerae DNA for otn region genes OtnE SWALL:Q56656 (EMBL:X90547) (229 aa) fasta scores: E(): 1.1e-22, 33.64% id in 211 aa, and to Shigella flexneri orf, conserved hypothetical protein yjbf or sf4178 SWALL:AAN45599 (EMBL:AE015426) (222 aa) fasta scores: E(): 4.3e-20, 34.52% id in 223 aa; lipoprotein 1641326 2884803 ECA1446 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_049552.1 1640649 D 218491 CDS YP_049553.1 50120386 2884804 1641336..1642118 1 NC_004547.2 Similar to Escherichia coli hypothetical protein ymcb precursor ymcb or b0985 SWALL:YMCB_ECOLI (SWALL:P75883) (248 aa) fasta scores: E(): 3.6e-08, 31% id in 258 aa, and to Shigella flexneri orf, conserved hypothetical protein ymcb or sf0987 SWALL:AAN42615 (EMBL:AE015127) (248 aa) fasta scores: E(): 3.6e-08, 32.04% id in 259 aa; hypothetical protein 1642118 2884804 ECA1447 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049553.1 1641336 D 218491 CDS YP_049554.1 50120387 2884685 1642115..1644247 1 NC_004547.2 Similar to Shigella flexneri orf, conserved hypothetical protein yjbh or sf4176 SWALL:AAN45597 (EMBL:AE015426) (698 aa) fasta scores: E(): 1e-142, 52.89% id in 673 aa, and to Escherichia coli hypothetical lipoprotein yjbh precursor yjbh or b4029 SWALL:YJBH_ECOLI (SWALL:P32689) (698 aa) fasta scores: E(): 5.8e-142, 53.04% id in 673 aa; hypothetical protein 1644247 2884685 ECA1448 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049554.1 1642115 D 218491 CDS YP_049555.1 50120388 2884686 1644638..1645195 1 NC_004547.2 catalyzes the interconversion of chorismate to prephenate; chorismate mutase 1645195 2884686 ECA1449 Pectobacterium atrosepticum SCRI1043 chorismate mutase YP_049555.1 1644638 D 218491 CDS YP_049556.1 50120389 2884687 1645215..1646834 1 NC_004547.2 Similar to Bacillus subtilis kumamolysin kumA SWALL:Q8RR56 (EMBL:AB070740) (572 aa) fasta scores: E(): 6.7e-73, 42.67% id in 539 aa, and to Alicyclobacillus sendaienensis collagenolytic serine-carboxyl proteinase precursor AscP SWALL:BAC41257 (EMBL:AB085855) (553 aa) fasta scores: E(): 3.3e-72, 43.59% id in 539 aa; protease 1646834 2884687 ECA1450 Pectobacterium atrosepticum SCRI1043 protease YP_049556.1 1645215 D 218491 CDS YP_049557.1 50120390 2884688 1647128..1648552 1 NC_004547.2 Similar to Escherichia coli 6-phospho-beta-glucosidase BglA or b2901 SWALL:BGLA_ECOLI (SWALL:Q46829) (479 aa) fasta scores: E(): 2.3e-55, 42.14% id in 484 aa, and to Streptomyces sp beta-glucosidase bgl3 SWALL:Q59976 (EMBL:Z29625) (479 aa) fasta scores: E(): 8.1e-57, 38.13% id in 472 aa; glycosyl hydrolase 1648552 2884688 ECA1451 Pectobacterium atrosepticum SCRI1043 glycosyl hydrolase YP_049557.1 1647128 D 218491 CDS YP_049558.1 50120391 2884642 1648648..1649484 1 NC_004547.2 Similar to Erwinia chrysanthemi beta-glucoside operon antiterminator ArbG SWALL:ARBG_ERWCH (SWALL:P26211) (283 aa) fasta scores: E(): 3e-42, 42.23% id in 277 aa, and to Escherichia coli cryptic beta-glucoside bgl operon antiterminator BglG or BglC or b3723 SWALL:BGLG_ECOLI (SWALL:P11989) (278 aa) fasta scores: E(): 8.6e-39, 37.95% id in 274 aa. Also similar to ECA1869, ArbG, (45.600% id. in 250 aa overlap), and to ECA4389 (37.956% id. in 274 aa overlap), and to ECA0858 (37.500% id. in 272 aa overlap); beta-glucoside operon antiterminator 1649484 2884642 ECA1452 Pectobacterium atrosepticum SCRI1043 beta-glucoside operon antiterminator YP_049558.1 1648648 D 218491 CDS YP_049559.1 50120392 2883813 1649698..1650771 1 NC_004547.2 Similar to Salmonella typhimurium AdrA protein AdrA or YaiC or stm0385 SWALL:Q9L401 (EMBL:AJ271071) (370 aa) fasta scores: E(): 1.7e-63, 46.49% id in 342 aa, and to Escherichia coli, and Escherichia coli O6 hypothetical protein YaiC or b0385 or c0492 SWALL:YAIC_ECOLI (SWALL:P21830) (371 aa) fasta scores: E(): 2.9e-66, 47.98% id in 348 aa; signaling membrane protein 1650771 adrA 2883813 adrA Pectobacterium atrosepticum SCRI1043 signaling membrane protein YP_049559.1 1649698 D 218491 CDS YP_049560.1 50120393 2884643 complement(1650843..1651130) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2589 ypo2589 or y1159 SWALL:AAM84736 (EMBL:AJ414152) (95 aa) fasta scores: E(): 3.5e-24, 66.31% id in 95 aa, and to Clostridium acetobutylicum uncharacterized conserved protein, ygin family cac3394 SWALL:Q97DS8 (EMBL:AE007837) (96 aa) fasta scores: E(): 2.4e-09, 40.69% id in 86 aa; hypothetical protein 1651130 2884643 ECA1454 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049560.1 1650843 R 218491 CDS YP_049561.1 50120394 2884644 complement(1651178..1652035) 1 NC_004547.2 Similar to Salmonella typhimurium transcriptional regulator stm4417 SWALL:Q8ZK65 (EMBL:AE008907) (277 aa) fasta scores: E(): 1.2e-62, 65.29% id in 268 aa, and to Yersinia pestis hypothetical protein ypo2576 or y1145 SWALL:Q8ZDJ0 (EMBL:AJ414152) (284 aa) fasta scores: E(): 4.3e-82, 79.93% id in 284 aa; transcriptional regulator 1652035 2884644 ECA1455 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_049561.1 1651178 R 218491 CDS YP_049562.1 50120395 2884706 1652381..1653892 1 NC_004547.2 Similar to Pseudomonas aeruginosa methylmalonate-semialdehyde dehydrogenase [acylating] MmsA or pa3570 SWALL:MMSA_PSEAE (SWALL:P28810) (496 aa) fasta scores: E(): 2.6e-87, 49.68% id in 483 aa, and to Yersinia pestis aldehyde dehydrogenase ypo2577 or y1146 SWALL:Q8ZDI9 (EMBL:AJ414152) (508 aa) fasta scores: E(): 1.9e-151, 78.62% id in 510 aa; aldehyde dehydrogenase 1653892 2884706 ECA1456 Pectobacterium atrosepticum SCRI1043 aldehyde dehydrogenase YP_049562.1 1652381 D 218491 CDS YP_049563.1 50120396 2884707 1654089..1656020 1 NC_004547.2 Similar to Yersinia pestis thiamine pyrophosphate-dependent protein ypo2578 SWALL:Q8ZDI8 (EMBL:AJ414152) (648 aa) fasta scores: E(): 1.8e-193, 74.33% id in 643 aa, and to Clostridium perfringens myo-inositol catabolism protein iold or cpe0089 SWALL:Q8XP76 (EMBL:AP003185) (639 aa) fasta scores: E(): 3.3e-142, 57.12% id in 639 aa; thiamine pyrophosphate-dependent protein 1656020 2884707 ECA1457 Pectobacterium atrosepticum SCRI1043 thiamine pyrophosphate-dependent protein YP_049563.1 1654089 D 218491 CDS YP_049564.1 50120397 2882765 1656775..1657761 1 NC_004547.2 Similar to Rhizobium meliloti myo-inositol 2-dehydrogenase IdhA or rb1194 or smb20899 SWALL:MI2D_RHIME (SWALL:O68965) (330 aa) fasta scores: E(): 4.2e-59, 49.84% id in 323 aa, and to Brucella melitensis myo-inositol 2-dehydrogenase bmeii0574 SWALL:Q8YCF6 (EMBL:AE009694) (334 aa) fasta scores: E(): 1.7e-60, 51.07% id in 325 aa; myo-inositol 2-dehydrogenase 1657761 idhA 2882765 idhA Pectobacterium atrosepticum SCRI1043 myo-inositol 2-dehydrogenase YP_049564.1 1656775 D 218491 CDS YP_049565.1 50120398 2884708 1657836..1658774 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi D-ribose-binding periplasmic protein precursor RbsP or stm3884 or sty3894 SWALL:RBSB_SALTY (SWALL:P02926) (296 aa) fasta scores: E(): 6.8e-24, 35.95% id in 267 aa, and to Yersinia pestis sugar-binding periplasmic protein ypo2581 SWALL:Q8ZDI7 (EMBL:AJ414152) (309 aa) fasta scores: E(): 6.5e-87, 80.76% id in 312 aa; sugar ABC transporter periplasmic protein 1658774 2884708 ECA1459 Pectobacterium atrosepticum SCRI1043 sugar ABC transporter periplasmic protein YP_049565.1 1657836 D 218491 CDS YP_049566.1 50120399 2884036 1658980..1660527 1 NC_004547.2 Similar to Yersinia pestis ATP-binding component of D-ribose high-affinity transport system RbsA or y1150 SWALL:AAM84727 (EMBL:AE013719) (515 aa) fasta scores: E(): 1.9e-156, 80.19% id in 515 aa, and to Caulobacter crescentus sugar ABC transporter, ATP-binding protein cc0860 SWALL:Q9A9V1 (EMBL:AE005763) (515 aa) fasta scores: E(): 5.3e-94, 53.72% id in 510 aa; sugar ABC transporter ATP-binding protein 1660527 2884036 ECA1460 Pectobacterium atrosepticum SCRI1043 sugar ABC transporter ATP-binding protein YP_049566.1 1658980 D 218491 CDS YP_049567.1 50120400 2884037 1660540..1661571 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ribose transport system permease protein RbsC or b3750 or c4678 or z5251 or ecs4692 SWALL:RBSC_ECOLI (SWALL:P04984) (321 aa) fasta scores: E(): 8.2e-43, 43.93% id in 330 aa, and to Yersinia pestis sugar transport system permease protein ypo2583 or rbsc or y1151 SWALL:Q8ZDI5 (EMBL:AJ414152) (342 aa) fasta scores: E(): 8.4e-110, 87.64% id in 340 aa; sugar ABC transporter permease 1661571 2884037 ECA1461 Pectobacterium atrosepticum SCRI1043 sugar ABC transporter permease YP_049567.1 1660540 D 218491 CDS YP_049568.1 50120401 2884038 1661611..1662744 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo2584 SWALL:Q8ZDI4 (EMBL:AJ414152) (377 aa) fasta scores: E(): 1.1e-117, 76.59% id in 376 aa, and to Rhizobium meliloti oxidoreductase protein r00356 or smc01163 SWALL:Q92SL5 (EMBL:AL591783) (376 aa) fasta scores: E(): 6.5e-61, 45.92% id in 368 aa; oxidoreductase 1662744 2884038 ECA1462 Pectobacterium atrosepticum SCRI1043 oxidoreductase YP_049568.1 1661611 D 218491 CDS YP_049569.1 50120402 2883978 1662791..1664695 1 NC_004547.2 Similar to Bacillus subtilis protein IolC or e83C SWALL:IOLC_BACSU (SWALL:P42414) (325 aa) fasta scores: E(): 1e-21, 31.64% id in 335 aa, and to Yersinia pestis carbohydrate kinase ypo2585 or y1153 SWALL:Q8ZDI3 (EMBL:AJ414152) (656 aa) fasta scores: E(): 3.8e-208, 78.44% id in 631 aa; carbohydrate kinase 1664695 2883978 ECA1463 Pectobacterium atrosepticum SCRI1043 carbohydrate kinase YP_049569.1 1662791 D 218491 CDS YP_049570.1 50120403 2885450 1664731..1665621 1 NC_004547.2 Similar to Rhizobium meliloti rhizopine catabolism protein MocC mocC SWALL:MOCC_RHIME (SWALL:P49304) (325 aa) fasta scores: E(): 1.3e-63, 53.58% id in 293 aa, and to Bacillus subtilis IolE protein IolE e83E SWALL:IOLE_BACSU (SWALL:P42416) (297 aa) fasta scores: E(): 5.1e-37, 37.67% id in 284 aa; myo-inositol catabolism protein 1665621 mocC 2885450 mocC Pectobacterium atrosepticum SCRI1043 myo-inositol catabolism protein YP_049570.1 1664731 D 218491 CDS YP_049571.1 50120404 2883979 1665648..1666472 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2587 or y1155 SWALL:Q8ZDI1 (EMBL:AJ414152) (271 aa) fasta scores: E(): 5.7e-84, 75.09% id in 265 aa, and to Salmonella typhimurium inner membrane protein stm4420 SWALL:Q8ZK62 (EMBL:AE008907) (269 aa) fasta scores: E(): 5e-73, 66.54% id in 269 aa; hypothetical protein 1666472 2883979 ECA1465 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049571.1 1665648 D 218491 CDS YP_049572.1 50120405 2883980 complement(1666599..1666913) 1 NC_004547.2 Similar to Enterobacter aerogenes KluB SWALL:Q93KC5 (EMBL:U67194) (104 aa) fasta scores: E(): 1.4e-21, 58.41% id in 101 aa, and to Pseudomonas sp. hypothetical 11.6 kDa protein orf1 SWALL:Q937D2 (EMBL:U66917) (104 aa) fasta scores: E(): 8.5e-22, 59.4% id in 101 aa; hypothetical protein 1666913 2883980 ECA1466 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049572.1 1666599 R 218491 CDS YP_049573.1 50120406 2883484 complement(1666913..1667191) 1 NC_004547.2 Similar to Enterobacter aerogenes KluA kluA SWALL:Q93KC6 (EMBL:U67194) (89 aa) fasta scores: E(): 6e-17, 60.92% id in 87 aa, and to Pseudomonas sp. hypothetical 10.2 kDa protein orf2 SWALL:Q937D1 (EMBL:U66917) (93 aa) fasta scores: E(): 6.3e-17, 60.92% id in 87 aa; hypothetical protein 1667191 2883484 ECA1467 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049573.1 1666913 R 218491 CDS YP_049574.1 50120407 2883485 complement(1667267..1667956) 1 NC_004547.2 Similar to Pseudomonas putida ABC transporter, ATP-binding protein, pp1078 SWALL:AAN66703 (EMBL:AE016778) (369 aa) fasta scores: E(): 1.5e-40, 54.5% id in 222 aa, and to Synechococcus elongatus ABC transporter ATP-binding protein tll1492 SWALL:BAC09044 (EMBL:AP005374) (373 aa) fasta scores: E(): 1.5e-37, 54.83% id in 217 aa; ABC transporter ATP-binding protein 1667956 2883485 ECA1468 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_049574.1 1667267 R 218491 CDS YP_049575.1 50120408 2883486 complement(1667978..1669675) 1 NC_004547.2 Similar to Brucella suis iron compound ABC transporter, permease protein, bra0699 SWALL:AAN33884 (EMBL:AE014565) (589 aa) fasta scores: E(): 1.3e-97, 51.53% id in 553 aa, and to Agrobacterium tumefaciens ABC transporter, membrane spanning protein fbpa3 or atu0408 or agr_c_717 SWALL:Q8UI90 (EMBL:AE009011) (558 aa) fasta scores: E(): 1.3e-95, 52.94% id in 527 aa; ABC transporter permease 1669675 2883486 ECA1469 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_049575.1 1667978 R 218491 CDS YP_049576.1 50120409 2883487 complement(1669659..1670708) 1 NC_004547.2 Similar to Agrobacterium tumefaciens ABC transporter, substrate binding protein fbpa or atu0407 or agr_c_715 SWALL:Q8UI91 (EMBL:AE009011) (351 aa) fasta scores: E(): 5.4e-84, 64.18% id in 349 aa, and to Brucella melitensis iron bmeii0584 SWALL:Q8YCE7 (EMBL:AE009695) (338 aa) fasta scores: E(): 1.2e-83, 64.93% id in 328 aa; ABC transporter substrate binding protein 1670708 2883487 ECA1470 Pectobacterium atrosepticum SCRI1043 ABC transporter substrate binding protein YP_049576.1 1669659 R 218491 CDS YP_049577.1 50120410 2883340 1671080..1671343 1 NC_004547.2 Similar to the C-terminal regions of Escherichia coli hypothetical protein YeaP or b1794 SWALL:YEAP_ECOLI (SWALL:P76245) (341 aa) fasta scores: E(): 0.00026, 41.79% id in 67 aa, and to Shigella flexneri orf, conserved hypothetical protein yeap or sf1430 SWALL:AAN43030 (EMBL:AE015167) (384 aa) fasta scores: E(): 0.00029, 41.79% id in 67 aa; hypothetical protein 1671343 2883340 ECA1471 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049577.1 1671080 D 218491 CDS YP_049578.1 50120411 2883341 complement(1671324..1671578) 1 NC_004547.2 Similar to Salmonella enterica subsp. enterica serovar Typhi Ty2 hypothetical protein T1150 t1150 SWALL:AAO68810 (EMBL:AE016838) (60 aa) fasta scores: E(): 2.6e-06, 52.72% id in 55 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein yoag or b1796 or c2202 or z2838 or ecs2505 SWALL:YOAG_ECOLI (SWALL:P76247) (60 aa) fasta scores: E(): 7.9e-06, 49.09% id in 55 aa; hypothetical protein 1671578 2883341 ECA1472 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049578.1 1671324 R 218491 CDS YP_049579.1 50120412 2883342 complement(1671671..1672003) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein year or b1797 or z2839 or ecs2506 SWALL:YEAR_ECOLI (SWALL:P76248) (119 aa) fasta scores: E(): 3.1e-30, 66.66% id in 105 aa, and to Salmonella typhi hypothetical protein Sty1850 SWALL:Q8Z6D6 (EMBL:AL627271) (120 aa) fasta scores: E(): 5.8e-30, 65.71% id in 105 aa; hypothetical protein 1672003 2883342 ECA1474 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049579.1 1671671 R 218491 CDS YP_049580.1 50120413 2883296 1672245..1672835 1 NC_004547.2 Similar to Bacillus halodurans hypothetical protein Bh0392 SWALL:Q9KFT5 (EMBL:AP001508) (202 aa) fasta scores: E(): 6.2e-23, 38.54% id in 192 aa, and to Thermoplasma acidophilum hypothetical protein Ta1444 SWALL:Q9HI97 (EMBL:AL445067) (214 aa) fasta scores: E(): 1.2e-18, 37.11% id in 194 aa; hypothetical protein 1672835 2883296 ECA1475 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049580.1 1672245 D 218491 CDS YP_049581.1 50120414 2883297 complement(1672922..1673326) 1 NC_004547.2 Similar to Ralstonia solanacearum hypothetical protein rsc3100 or rs00553 SWALL:Q8XUT5 (EMBL:AL646073) (131 aa) fasta scores: E(): 0.0028, 31.3% id in 115 aa, and to Halobacterium sp. Vng0367H SWALL:Q9HS78 (EMBL:AE004995) (114 aa) fasta scores: E(): 0.049, 28.71% id in 101 aa; hypothetical protein 1673326 2883297 ECA1476 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049581.1 1672922 R 218491 CDS YP_049582.1 50120415 2883298 complement(1673638..1673904) 1 NC_004547.2 Similar to Ralstonia solanacearum hypothetical protein rsc2590 or rs00838 SWALL:Q8XW85 (EMBL:AL646070) (128 aa) fasta scores: E(): 2.3e-14, 57.33% id in 75 aa, and to Mycobacterium tuberculosis hypothetical protein rv2740 or mtv002.05 SWALL:O33283 (EMBL:AL008967) (149 aa) fasta scores: E(): 0.3, 36.23% id in 69 aa; hypothetical protein 1673904 2883298 ECA1477 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049582.1 1673638 R 218491 CDS YP_049583.1 50120416 2883175 1674049..1674948 1 NC_004547.2 Similar to Ralstonia solanacearum probable transcription regulator protein rsc2598 or rs00846 SWALL:Q8XW77 (EMBL:AL646070) (299 aa) fasta scores: E(): 7.9e-85, 74.4% id in 293 aa, and to Rhizobium loti probable transcriptional regulator mlr2197 SWALL:Q98IX9 (EMBL:AP002999) (298 aa) fasta scores: E(): 3.3e-49, 48.92% id in 280 aa; AraC family transcriptional regulator 1674948 2883175 ECA1478 Pectobacterium atrosepticum SCRI1043 AraC family transcriptional regulator YP_049583.1 1674049 D 218491 CDS YP_049584.1 50120417 2883176 complement(1675101..1676003) 1 NC_004547.2 Similar to Agrobacterium tumefaciens transcriptional regulator, LysR family atu5325 or agr_pat_467 SWALL:Q8UJZ9 (EMBL:AE008954) (300 aa) fasta scores: E(): 6.9e-83, 71.33% id in 300 aa, and to Rhizobium loti transcriptional regulator mll2784 SWALL:Q98HN8 (EMBL:AP003000) (307 aa) fasta scores: E(): 1.2e-37, 39.11% id in 294 aa; LysR family transcriptional regulator 1676003 2883176 ECA1479 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_049584.1 1675101 R 218491 CDS YP_049585.1 50120418 2883177 1676095..1677111 1 NC_004547.2 Similar to Streptomyces avermitilis zinc-binding oxidoreductase SWALL:BAC68386 (EMBL:AP005023) (331 aa) fasta scores: E(): 1e-66, 58.55% id in 333 aa, and to Agrobacterium tumefaciens zinc-binding oxidoreductase atu5324 or agr_pat_466 SWALL:Q8UK00 (EMBL:AE008954) (353 aa) fasta scores: E(): 4.3e-92, 73.73% id in 335 aa; zinc-binding oxidoreductase 1677111 2883177 ECA1480 Pectobacterium atrosepticum SCRI1043 zinc-binding oxidoreductase YP_049585.1 1676095 D 218491 CDS YP_049586.1 50120419 2882980 1677773..1678411 1 NC_004547.2 Similar to Pseudomonas putida thymidylate kinase, pp3363 SWALL:AAN68967 (EMBL:AE016786) (205 aa) fasta scores: E(): 1.3e-57, 73.76% id in 202 aa; hypothetical protein 1678411 2882980 ECA1481 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049586.1 1677773 D 218491 CDS YP_049587.1 50120420 2882981 complement(1678659..1679588) 1 NC_004547.2 Similar to Rhizobium loti transcriptional regulator mlr0648 SWALL:Q98MB4 (EMBL:AP002995) (311 aa) fasta scores: E(): 4.8e-28, 31.95% id in 291 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa1328 SWALL:Q9I416 (EMBL:AE004562) (302 aa) fasta scores: E(): 3.5e-27, 34.72% id in 288 aa; LysR family transcriptional regulator 1679588 2882981 ECA1482 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_049587.1 1678659 R 218491 CDS YP_049588.1 50120421 2882982 1679728..1680303 1 NC_004547.2 Similar to Klebsiella aerogenes KefC regulator YabF SWALL:Q9X755 (EMBL:AJ242913) (177 aa) fasta scores: E(): 4.1e-15, 36.36% id in 176 aa, and to Escherichia coli, and Escherichia coli O6 NAD(P)H oxidoreductase YabF or b0046 or c0056 SWALL:YABF_ECOLI (SWALL:P31577) (176 aa) fasta scores: E(): 1e-17, 46.47% id in 142 aa; NAD(P)H oxidoreductase 1680303 2882982 ECA1483 Pectobacterium atrosepticum SCRI1043 NAD(P)H oxidoreductase YP_049588.1 1679728 D 218491 CDS YP_049589.1 50120422 2885583 1680319..1680597 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo1733 SWALL:Q8ZFH6 (EMBL:AJ414150) (94 aa) fasta scores: E(): 9.6e-06, 33.33% id in 87 aa, and to Rhizobium loti hypothetical protein Mlr3009 SWALL:Q98H68 (EMBL:AP003000) (101 aa) fasta scores: E(): 0.00016, 37.2% id in 86 aa; hypothetical protein 1680597 2885583 ECA1484 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049589.1 1680319 D 218491 CDS YP_049590.1 50120423 2885584 1680733..1681461 1 NC_004547.2 Similar to Fusobacterium nucleatum hypothetical cytosolic protein Fn1347 SWALL:Q8RDZ4 (EMBL:AE010639) (218 aa) fasta scores: E(): 2.7e-21, 31.77% id in 214 aa, and to Rhizobium meliloti hypothetical protein ra0291 or sma0558 SWALL:Q930A7 (EMBL:AE007221) (170 aa) fasta scores: E(): 6.4e-06, 34.94% id in 83 aa; lipoprotein 1681461 2885584 ECA1485 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_049590.1 1680733 D 218491 CDS YP_049591.1 50120424 2885585 complement(1681842..1683506) 1 NC_004547.2 Similar to Pseudomonas syringae ATP-binding protein SyrD SWALL:SYRD_PSESY (SWALL:P33951) (566 aa) fasta scores: E(): 1.2e-54, 34.27% id in 566 aa, and to Synechococcus elongatus ABC transporter ATP-binding protein tlr1649 SWALL:BAC09201 (EMBL:AP005374) (542 aa) fasta scores: E(): 6e-69, 39.92% id in 541 aa; ABC transporter ATP-binding protein 1683506 2885585 ECA1486 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_049591.1 1681842 R 218491 CDS YP_049592.1 50120425 2885586 complement(1683593..1704739) 1 NC_004547.2 Similar to Pseudomonas syringae syringomycin synthetase SyrE SWALL:O85168 (EMBL:AF047828) (9376 aa) fasta scores: E(): 0, 43.13% id in 6600 aa, and to Anabaena sp. 90 peptide synthetase AdpB SWALL:Q9K5M1 (EMBL:AJ269505) (5060 aa) fasta scores: E(): 2.8e-208, 34.22% id in 4859 aa; non-ribosomal peptide synthetase 1704739 2885586 ECA1487 Pectobacterium atrosepticum SCRI1043 non-ribosomal peptide synthetase YP_049592.1 1683593 R 218491 CDS YP_049593.1 50120426 2885527 complement(1704732..1727303) 1 NC_004547.2 Similar to Pseudomonas syringae syringomycin synthetase SWALL:O85168 (EMBL:AF047828) (9376 aa) fasta scores: E(): 0, 42.92% id in 7655 aa, and to Pseudomonas sp. MIS38 arthrofactin synthetase c arfC SWALL:BAC67536 (EMBL:AB107223) (5924 aa) fasta scores: E(): 0, 46.8% id in 5469 aa; non-ribosomal peptide synthetase 1727303 2885527 ECA1488 Pectobacterium atrosepticum SCRI1043 non-ribosomal peptide synthetase YP_049593.1 1704732 R 218491 CDS YP_049594.1 50120427 2883665 complement(1728129..1729391) 1 NC_004547.2 lactose/proton symporter; mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides; member of major facilitator superfamily; functions as a monomer with 12 transmembrane segments; galactoside permease 1729391 lacY 2883665 lacY Pectobacterium atrosepticum SCRI1043 galactoside permease YP_049594.1 1728129 R 218491 CDS YP_049595.1 50120428 2883666 complement(1729534..1732656) 1 NC_004547.2 forms a homotetramer; hydrolyzes lactose disaccharide to galactose and glucose; converts lactose to allolactose which is the natural inducer of the lac operon; beta-D-galactosidase 1732656 lacZ 2883666 lacZ Pectobacterium atrosepticum SCRI1043 beta-D-galactosidase YP_049595.1 1729534 R 218491 CDS YP_049596.1 50120429 2883740 complement(1732952..1734028) 1 NC_004547.2 transcriptional repressor of lac operon; forms a homotetramer as a dimer of dimers; binds specific sites in lac operon resulting in DNA looping between the operators; binds allolactose as inducer; lac repressor 1734028 lacI 2883740 lacI Pectobacterium atrosepticum SCRI1043 lac repressor YP_049596.1 1732952 R 218491 CDS YP_049597.1 50120430 2883212 complement(1734179..1735237) 1 NC_004547.2 Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import; ferric transporter ATP-binding subunit 1735237 fbpC 2883212 fbpC Pectobacterium atrosepticum SCRI1043 ferric transporter ATP-binding subunit YP_049597.1 1734179 R 218491 CDS YP_049598.1 50120431 2883248 complement(1735243..1737321) 1 NC_004547.2 Similar to Actinobacillus pleuropneumoniae ferric transport system permease protein AfuB SWALL:AFUB_ACTPL (SWALL:Q44123) (687 aa) fasta scores: E(): 8.6e-167, 64.73% id in 672 aa, and to Escherichia coli O157:H7 permease component of transport system for ferric iron AfuB or z0459 or ecs0414 SWALL:Q8X5J2 (EMBL:AE005215) (692 aa) fasta scores: E(): 2.1e-217, 81.21% id in 692 aa; ferric ABC transporter permease 1737321 afuB 2883248 afuB Pectobacterium atrosepticum SCRI1043 ferric ABC transporter permease YP_049598.1 1735243 R 218491 CDS YP_049599.1 50120432 2883247 complement(1737522..1738556) 1 NC_004547.2 Similar to Actinobacillus pleuropneumoniae AfuA protein afuA SWALL:Q57512 (EMBL:U05042) (346 aa) fasta scores: E(): 1.4e-97, 69.56% id in 345 aa, and to Escherichia coli O157:H7 periplasmic ferric iron-binding protein AfuA or z0460 or ecs0415 SWALL:Q8X5J1 (EMBL:AE005215) (343 aa) fasta scores: E(): 4.2e-115, 84.01% id in 344 aa; ABC transporter iron-binding protein 1738556 afuA 2883247 afuA Pectobacterium atrosepticum SCRI1043 ABC transporter iron-binding protein YP_049599.1 1737522 R 218491 CDS YP_049600.1 50120433 2884202 complement(1738717..1740042) 1 NC_004547.2 Similar to Escherichia coli regulatory protein UhpC or b3667 SWALL:UHPC_ECOLI (SWALL:P09836) (439 aa) fasta scores: E(): 3.6e-99, 53.34% id in 433 aa, and to Yersinia pestis regulatory protein UhpC or ypo4007 SWALL:Q8ZA15 (EMBL:AJ414160) (443 aa) fasta scores: E(): 3.8e-103, 56.11% id in 417 aa; regulatory protein 1740042 uhpC 2884202 uhpC Pectobacterium atrosepticum SCRI1043 regulatory protein YP_049600.1 1738717 R 218491 CDS YP_049601.1 50120434 2884201 complement(1740132..1741709) 1 NC_004547.2 Similar to Escherichia coli sensor protein UhpB or b3668 SWALL:UHPB_ECOLI (SWALL:P09835) (500 aa) fasta scores: E(): 1e-25, 36.17% id in 528 aa, and to Vibrio cholerae sensor protein UhpB vca0683 SWALL:Q9KLQ9 (EMBL:AE004397) (527 aa) fasta scores: E(): 3.7e-66, 42.47% id in 518 aa; two-component system sensor histidine kinase 1741709 uhpB 2884201 uhpB Pectobacterium atrosepticum SCRI1043 two-component system sensor histidine kinase YP_049601.1 1740132 R 218491 CDS YP_049602.1 50120435 2884200 complement(1741713..1742342) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri transcriptional regulatory protein UhpA or b3669 or c4593 or z5159 or ecs4606 or sf3792 SWALL:UHPA_ECOLI (SWALL:P10940) (196 aa) fasta scores: E(): 1.2e-29, 48.98% id in 196 aa; two-component system response regulator protein 1742342 uhpA 2884200 uhpA Pectobacterium atrosepticum SCRI1043 two-component system response regulator protein YP_049602.1 1741713 R 218491 CDS YP_049603.1 50120436 2881283 1742860..1743672 1 NC_004547.2 Similar to Escherichia coli lipoprotein-28 precursor NlpA or b3661 SWALL:NLPA_ECOLI (SWALL:P04846) (272 aa) fasta scores: E(): 4e-69, 73.18% id in 261 aa; lipoprotein-28 1743672 nlpA 2881283 nlpA Pectobacterium atrosepticum SCRI1043 lipoprotein-28 YP_049603.1 1742860 D 218491 CDS YP_049604.1 50120437 2883239 1743889..1744833 1 NC_004547.2 Previously sequenced as Erwinia carotovora pectin lyase Pnl SWALL:PLYD_ERWCA (SWALL:P24112) (314 aa) fasta scores: E(): 5.8e-119, 94.58% id in 314 aa; pectin lyase 1744833 pnl 2883239 pnl Pectobacterium atrosepticum SCRI1043 pectin lyase YP_049604.1 1743889 D 218491 CDS YP_049605.1 50120438 2885528 complement(1744989..1745705) 1 NC_004547.2 Similar to Streptococcus thermophilus aspartate racemase SWALL:RACD_STRTR (SWALL:P29079) (243 aa) fasta scores: E(): 1.2e-13, 31.33% id in 233 aa, and to Erwinia carotovora hypothetical protein in pnlA 3'region SWALL:YPNL_ERWCA (SWALL:P32968) (150 aa) fasta scores: E(): 4.2e-52, 93.33% id in 150 aa; aspartate racemase 1745705 2885528 ECA1500 Pectobacterium atrosepticum SCRI1043 aspartate racemase YP_049605.1 1744989 R 218491 CDS YP_049606.1 50120439 2885529 1745928..1746827 1 NC_004547.2 Similar to Escherichia coli hypothetical transcriptional regulator yjie or b4327 SWALL:YJIE_ECOLI (SWALL:P39376) (303 aa) fasta scores: E(): 3.1e-55, 50% id in 294 aa, and to Shigella flexneri transcriptional regulator LysR-type yjie or sf4191 SWALL:AAN45612 (EMBL:AE015427) (303 aa) fasta scores: E(): 1.6e-54, 49.66% id in 294 aa; LysR family transcriptional regulator 1746827 2885529 ECA1501 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_049606.1 1745928 D 218491 CDS YP_049607.1 50120440 2882107 complement(1746911..1748218) 1 NC_004547.2 Similar to Escherichia coli proton glutamate symport protein GltP or b4077 SWALL:GLTP_ECOLI (SWALL:P21345) (437 aa) fasta scores: E(): 2.1e-54, 38.47% id in 434 aa; proton glutamate symport protein 1748218 gltP 2882107 gltP Pectobacterium atrosepticum SCRI1043 proton glutamate symport protein YP_049607.1 1746911 R 218491 CDS YP_049608.1 50120441 2882850 complement(1748900..1749793) 1 NC_004547.2 Similar to Ralstonia solanacearum probable transcription regulator protein rsp0328 or rs05438 SWALL:Q8XSY9 (EMBL:AL646078) (311 aa) fasta scores: E(): 8.3e-33, 36.86% id in 293 aa, and to Ralstonia solanacearum transcription regulator protein rsp0331 or rs00705 SWALL:Q8XSY6 (EMBL:AL646078) (298 aa) fasta scores: E(): 1.4e-29, 35.19% id in 287 aa; hypothetical protein 1749793 2882850 ECA1505 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049608.1 1748900 R 218491 CDS YP_049609.1 50120442 2884965 complement(1749904..1751217) 1 NC_004547.2 Similar to Bacillus subtilis mg citM SWALL:CITM_BACSU (SWALL:P55069) (433 aa) fasta scores: E(): 1.4e-80, 53.24% id in 432 aa, and to Bacillus subtilis citrate transporter CitN or CitH or n15cR SWALL:CITN_BACSU (SWALL:P42308) (426 aa) fasta scores: E(): 3.2e-91, 57.14% id in 434 aa; citrate transporter 1751217 citM 2884965 citM Pectobacterium atrosepticum SCRI1043 citrate transporter YP_049609.1 1749904 R 218491 CDS YP_049610.1 50120443 2882851 complement(1752061..1754157) 1 NC_004547.2 Similar to Escherichia coli formate dehydrogenase H FdhF or b4079 SWALL:FDHF_ECOLI (SWALL:P07658) (715 aa) fasta scores: E(): 1.3e-194, 66.52% id in 699 aa; formate dehydrogenase 1754157 2882851 ECA1507 Pectobacterium atrosepticum SCRI1043 formate dehydrogenase YP_049610.1 1752061 R 218491 CDS YP_049611.1 50120444 2882852 1754695..1756374 1 NC_004547.2 Similar to Escherichia coli methyl-accepting chemotaxis protein II Tar or CheM or b1886 SWALL:MCP2_ECOLI (SWALL:P07017) (553 aa) fasta scores: E(): 1.1e-56, 39.57% id in 566 aa; methyl-accepting chemotaxis protein 1756374 2882852 ECA1509 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_049611.1 1754695 D 218491 CDS YP_049612.1 50120445 2882734 1756920..1758824 1 NC_004547.2 Similar to Yersinia pestis similarity to some hypothetical proteins in b. subtilis ypo1941 or y2370 SWALL:Q9ZC51 (EMBL:AL031866) (639 aa) fasta scores: E(): 5.2e-172, 74.02% id in 639 aa, and to Pasteurella multocida hypothetical protein Pm0453 pSWALL:Q9CNH8 (EMBL:AE006081) (634 aa) fasta scores: E(): 9.6e-146, 64.36% id in 623 aa; iron permease 1758824 2882734 ECA1510 Pectobacterium atrosepticum SCRI1043 iron permease YP_049612.1 1756920 D 218491 CDS YP_049613.1 50120446 2882735 1758941..1759468 1 NC_004547.2 Similar to Yersinia pestis 102 kbases unstable region: from 1 to 119443 ypo1942 SWALL:Q9ZC52 (EMBL:AL031866) (175 aa) fasta scores: E(): 2.4e-63, 86.78% id in 174 aa, and to Pasteurella multocida hypothetical protein Pm0452 SWALL:Q9CNH9 (EMBL:AE006081) (173 aa) fasta scores: E(): 1.1e-57, 79.06% id in 172 aa; hypothetical protein 1759468 2882735 ECA1511 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049613.1 1758941 D 218491 CDS YP_049614.1 50120447 2882736 1759692..1761089 1 NC_004547.2 Similar to Yersinia pestis integral membrane protein y2367 SWALL:AAM85925 (EMBL:AE013839) (484 aa) fasta scores: E(): 1.4e-119, 63.36% id in 464 aa, and to Pasteurella multocida hypothetical protein Pm0451 SWALL:Q9CNI0 (EMBL:AE006080) (465 aa) fasta scores: E(): 2e-85, 49.67% id in 463 aa; hypothetical protein 1761089 2882736 ECA1512 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049614.1 1759692 D 218491 CDS YP_049615.1 50120448 2881448 1761092..1762381 1 NC_004547.2 Similar to Yersinia pestis similar to ABC transporter: eg ybjz_ecoli hypothetical ABC transporter ypo1944 or y2366 SWALL:AAM85924 (EMBL:AL031866) (430 aa) fasta scores: E(): 9.9e-137, 81.86% id in 430 aa, and to Pasteurella multocida hypothetical protein Pm0450 SWALL:Q9CNI1 (EMBL:AE006080) (440 aa) fasta scores: E(): 4.2e-79, 67.95% id in 440 aa; permease 1762381 2881448 ECA1513 Pectobacterium atrosepticum SCRI1043 permease YP_049615.1 1761092 D 218491 CDS YP_049616.1 50120449 2881449 1762389..1763510 1 NC_004547.2 Similar to Yersinia pestis integral membrane protein y2365 SWALL:Q8D0D2 (EMBL:AE013839) (406 aa) fasta scores: E(): 5.3e-111, 83.06% id in 372 aa, and to Pasteurella multocida hypothetical protein Pm0449 SWALL:Q9CNI2 (EMBL:AE006080) (371 aa) fasta scores: E(): 1.3e-90, 67.92% id in 371 aa; permease 1763510 2881449 ECA1514 Pectobacterium atrosepticum SCRI1043 permease YP_049616.1 1762389 D 218491 CDS YP_049617.1 50120450 2881450 1763515..1764231 1 NC_004547.2 Similar to Yersinia pestis similar to many ypo1946 or y2364 SWALL:AAM85922 (EMBL:AL031866) (237 aa) fasta scores: E(): 4.4e-66, 80.85% id in 235 aa, and to Pasteurella multocida hypothetical protein Pm0448 SWALL:Q9CNI3 (EMBL:AE006080) (227 aa) fasta scores: E(): 1.6e-59, 80% id in 220 aa; ABC transporter ATP-binding protein 1764231 2881450 ECA1515 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_049617.1 1763515 D 218491 CDS YP_049618.1 50120451 2882198 1764218..1764715 1 NC_004547.2 Similar to Yersinia pestis thioredoxin-family protein y2363 SWALL:AAM85921 (EMBL:AE013839) (176 aa) fasta scores: E(): 3.3e-34, 60.49% id in 162 aa, and to Pasteurella multocida ResA or pm0447 SWALL:Q9CNI4 (EMBL:AE006080) (175 aa) fasta scores: E(): 3e-18, 40% id in 165 aa; lipoprotein 1764715 2882198 ECA1516 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_049618.1 1764218 D 218491 CDS YP_049619.1 50120452 2882199 complement(1764766..1765743) 1 NC_004547.2 Similar to Escherichia coli hypothetical protein ytff or b4210 SWALL:YTFF_ECOLI (SWALL:P39314) (324 aa) fasta scores: E(): 5.1e-83, 64.24% id in 316 aa, and to Salmonella typhimurium cationic amino acid transporter ytff or stm4400 SWALL:Q8ZK75 (EMBL:AE008906) (321 aa) fasta scores: E(): 6.8e-83, 64.59% id in 322 aa; hypothetical protein 1765743 2882199 ECA1517 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049619.1 1764766 R 218491 CDS YP_049620.1 50120453 2882200 complement(1765863..1766696) 1 NC_004547.2 Similar to Pseudomonas putida transcriptional regulator, AraC family pp2383 SWALL:AAN67996 (EMBL:AE016783) (281 aa) fasta scores: E(): 1.1e-30, 40.21% id in 281 aa, and to Vibrio cholerae transcriptional regulator, arac/xyls family vca1001 SWALL:Q9KKU9 (EMBL:AE004427) (277 aa) fasta scores: E(): 4.3e-30, 35.44% id in 268 aa; AraC family transcriptional regulator 1766696 2882200 ECA1518 Pectobacterium atrosepticum SCRI1043 AraC family transcriptional regulator YP_049620.1 1765863 R 218491 CDS YP_049621.1 50120454 2882114 1767252..1768205 1 NC_004547.2 Similar to Escherichia coli transcriptional regulator Cbl or b1987 SWALL:CBL_ECOLI (SWALL:Q47083) (316 aa) fasta scores: E(): 2.1e-84, 70.34% id in 317 aa, and to Klebsiella aerogenes transcriptional regulator Cbl SWALL:CBL_KLEAE (SWALL:Q08598) (316 aa) fasta scores: E(): 2.5e-85, 71.92% id in 317 aa; transcriptional regulator CysB-like protein 1768205 cbl 2882114 cbl Pectobacterium atrosepticum SCRI1043 transcriptional regulator CysB-like protein YP_049621.1 1767252 D 218491 CDS YP_049622.1 50120455 2882139 1768623..1769945 1 NC_004547.2 carrier protein part of the Na(+)-independent, binding-protein-independent glutamate-aspartate transport system; glutamate/aspartate:proton symporter 1769945 gltP 2882139 gltP Pectobacterium atrosepticum SCRI1043 glutamate/aspartate:proton symporter YP_049622.1 1768623 D 218491 CDS YP_049623.1 50120456 2882201 1770116..1771012 1 NC_004547.2 no significant database matches; hypothetical protein 1771012 2882201 ECA1521 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049623.1 1770116 D 218491 CDS YP_049624.1 50120457 2885400 1771277..1771549 1 NC_004547.2 no significant database matches; hypothetical protein 1771549 2885400 ECA1522 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049624.1 1771277 D 218491 CDS YP_049625.1 50120458 2885401 complement(1771636..1772739) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 glycerol dehydrogenase GldA or b3945 or c4904 SWALL:GLDA_ECOLI (SWALL:P32665) (367 aa) fasta scores: E(): 3.2e-32, 36.26% id in 353 aa; glycerol dehydrogenase 1772739 2885401 ECA1523 Pectobacterium atrosepticum SCRI1043 glycerol dehydrogenase YP_049625.1 1771636 R 218491 CDS YP_049626.1 50120459 2885402 complement(1772857..1773723) 1 NC_004547.2 Similar to Pseudomonas putida ABC transporter, permease protein pp0172 SWALL:AAN65805 (EMBL:AE016774) (287 aa) fasta scores: E(): 3.9e-82, 74.2% id in 283 aa, and to Xanthomonas axonopodis permease nrtb or xac0827 SWALL:Q8PP61 (EMBL:AE011714) (294 aa) fasta scores: E(): 2e-74, 67.95% id in 284 aa; ABC transporter permease 1773723 2885402 ECA1524 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_049626.1 1772857 R 218491 CDS YP_049627.1 50120460 2881204 complement(1773683..1774549) 1 NC_004547.2 Similar to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa2308 SWALL:Q9I1G7 (EMBL:AE004657) (282 aa) fasta scores: E(): 2.2e-67, 75.61% id in 246 aa, and to Xanthomonas campestris ABC transporter ATP-binding component nrtcd or xcc0773 SWALL:Q8PCG1 (EMBL:AE012177) (279 aa) fasta scores: E(): 1.8e-64, 70.91% id in 251 aa; ABC transporter ATP-binding protein 1774549 2881204 ECA1525 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_049627.1 1773683 R 218491 CDS YP_049628.1 50120461 2881205 complement(1774607..1775629) 1 NC_004547.2 Similar to Pseudomonas putida ABC transporter, periplasmic binding protein pp0170 SWALL:AAN65803 (EMBL:AE016774) (339 aa) fasta scores: E(): 9.4e-68, 56.11% id in 335 aa, and to Xanthomonas axonopodis ABC transporter substrate binding protein xac0829 SWALL:Q8PP59 (EMBL:AE011714) (338 aa) fasta scores: E(): 1.1e-54, 47.72% id in 329 aa; ABC transporter periplasmic-binding protein 1775629 2881205 ECA1526 Pectobacterium atrosepticum SCRI1043 ABC transporter periplasmic-binding protein YP_049628.1 1774607 R 218491 CDS YP_049629.1 50120462 2881206 1775956..1776978 1 NC_004547.2 Similar to Methanococcus jannaschii L-sulfolactate dehydrogenase ComC or Mdh or mj1425 SWALL:COMC_METJA (SWALL:Q58820) (344 aa) fasta scores: E(): 1.5e-25, 31.57% id in 323 aa, and to Escherichia coli O157:H7 hypothetical oxidoreductase ybic ybic or z1022 or ecs0879 SWALL:YBIC_ECO57 (SWALL:P58409) (361 aa) fasta scores: E(): 4e-52, 43.33% id in 330 aa; malate/lactate dehydrogenase 1776978 2881206 ECA1527 Pectobacterium atrosepticum SCRI1043 malate/lactate dehydrogenase YP_049629.1 1775956 D 218491 CDS YP_049630.1 50120463 2884315 1777037..1778050 1 NC_004547.2 Similar to Escherichia coli taurine-binding periplasmic protein precursor TauA or SsiA or b0365 SWALL:TAUA_ECOLI (SWALL:Q47537) (320 aa) fasta scores: E(): 2.3e-23, 29.21% id in 332 aa, and to Rhizobium loti taurine transport system periplasmic protein mlr4517 SWALL:Q98DW7 (EMBL:AP003004) (337 aa) fasta scores: E(): 2e-27, 32.74% id in 342 aa; taurine-binding periplasmic protein 1778050 tauA 2884315 tauA Pectobacterium atrosepticum SCRI1043 taurine-binding periplasmic protein YP_049630.1 1777037 D 218491 CDS YP_049631.1 50120464 2884311 1778057..1778830 1 NC_004547.2 Similar to Escherichia coli taurine transport system permease protein TauC or SsiC or b0367 SWALL:TAUC_ECOLI (SWALL:Q47539) (275 aa) fasta scores: E(): 1.8e-40, 41.6% id in 250 aa; taurine transport system permease 1778830 tauC 2884311 tauC Pectobacterium atrosepticum SCRI1043 taurine transport system permease YP_049631.1 1778057 D 218491 CDS YP_049632.1 50120465 2884316 1778827..1779630 1 NC_004547.2 Similar to Escherichia coli taurine transport ATP-binding protein TauB or SsiB or b0366 SWALL:TAUB_ECOLI (SWALL:Q47538) (255 aa) fasta scores: E(): 1.3e-36, 45.18% id in 239 aa; taurine transport ATP-binding protein 1779630 tauB 2884316 tauB Pectobacterium atrosepticum SCRI1043 taurine transport ATP-binding protein YP_049632.1 1778827 D 218491 CDS YP_049633.1 50120466 2881332 1779652..1780665 1 NC_004547.2 catalyzes the formation of pyruvate from D-cysteine; D-cysteine desulfhydrase 1780665 2881332 ECA1531 Pectobacterium atrosepticum SCRI1043 D-cysteine desulfhydrase YP_049633.1 1779652 D 218491 CDS YP_049634.1 50120467 2881333 1780662..1781378 1 NC_004547.2 Similar to Streptococcus thermophilus aspartate racemase SWALL:RACD_STRTR (SWALL:P29079) (243 aa) fasta scores: E(): 9.6e-15, 30.43% id in 207 aa, and to Pyrococcus furiosus aspartate racemase pf0980 SWALL:Q8U269 (EMBL:AE010210) (228 aa) fasta scores: E(): 1.1e-27, 40.26% id in 231 aa; aspartate racemase 1781378 2881333 ECA1532 Pectobacterium atrosepticum SCRI1043 aspartate racemase YP_049634.1 1780662 D 218491 CDS YP_049635.1 50120468 2884843 complement(1781498..1782838) 1 NC_004547.2 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters; anaerobic C4-dicarboxylate transporter 1782838 dcuB 2884843 dcuB Pectobacterium atrosepticum SCRI1043 anaerobic C4-dicarboxylate transporter YP_049635.1 1781498 R 218491 CDS YP_049636.1 50120469 2883277 complement(1783707..1785077) 1 NC_004547.2 Similar to Pseudomonas fluorescens outer membrane protein HasF SWALL:Q9RHT0 (EMBL:AB023289) (442 aa) fasta scores: E(): 1.5e-85, 54.96% id in 433 aa, and to Erwinia chrysanthemi proteases secretion protein PrtF precursor prtF SWALL:PRTF_ERWCH (SWALL:P23598) (462 aa) fasta scores: E(): 2.1e-75, 48.82% id in 424 aa. Also similar to ECA2781 (48.956% identity in 431 aa overlap); outer membrane secretion protein 1785077 hasF 2883277 hasF Pectobacterium atrosepticum SCRI1043 outer membrane secretion protein YP_049636.1 1783707 R 218491 CDS YP_049637.1 50120470 2883496 complement(1785080..1786438) 1 NC_004547.2 Similar to Pseudomonas fluorescens membrane fusion protein HasE SWALL:Q9RHT1 (EMBL:AB023289) (443 aa) fasta scores: E(): 2.5e-67, 52.28% id in 438 aa, and to Erwinia chrysanthemi proteases secretion protein PrtE SWALL:PRTE_ERWCH (SWALL:P23597) (448 aa) fasta scores: E(): 3.8e-62, 46.03% id in 441 aa. Also similar to ECA2782 (47.529% identity in 425 aa overlap); HlyD family secretion protein 1786438 hasE 2883496 hasE Pectobacterium atrosepticum SCRI1043 HlyD family secretion protein YP_049637.1 1785080 R 218491 CDS YP_049638.1 50120471 2883495 complement(1786503..1788362) 1 NC_004547.2 Similar to Pseudomonas fluorescens ABC protein HasD SWALL:Q9RHT2 (EMBL:AB023289) (580 aa) fasta scores: E(): 2.6e-129, 65.58% id in 584 aa, and to Erwinia chrysanthemi proteases secretion ATP-binding protein PrtD SWALL:PRTD_ERWCH (SWALL:P23596) (575 aa) fasta scores: E(): 5.2e-113, 59.47% id in 570 aa. Also similar to ECA2783 (58.719% id. in 562 aa overlap); type I secretion ATP-binding protein 1788362 hasD 2883495 hasD Pectobacterium atrosepticum SCRI1043 type I secretion ATP-binding protein YP_049638.1 1786503 R 218491 CDS YP_049639.1 50120472 2883494 complement(1788622..1789239) 1 NC_004547.2 Similar to Serratia marcescens hemophore HasA SWALL:HASA_SERMA (SWALL:Q54450) (188 aa) fasta scores: E(): 6.1e-27, 50.27% id in 183 aa, and to Pseudomonas aeruginosa HasaP or pa3407 SWALL:O69756 (EMBL:Y16895) (205 aa) fasta scores: E(): 8.3e-25, 45.71% id in 210 aa; heme ABC transporter substrate-binding protein 1789239 hasA 2883494 hasA Pectobacterium atrosepticum SCRI1043 heme ABC transporter substrate-binding protein YP_049639.1 1788622 R 218491 CDS YP_049640.1 50120473 2883278 complement(1789357..1792035) 1 NC_004547.2 Similar to Serratia marcescens HasR protein SWALL:P72473 (EMBL:Y08983) (899 aa) fasta scores: E(): 2.1e-176, 62.03% id in 893 aa, and to Yersinia pestis TonB dependent receptor protein ypo3923 or hasr or y0313 SWALL:Q8ZA89 (EMBL:AJ414159) (830 aa) fasta scores: E(): 1.5e-86, 52.03% id in 786 aa; TonB-dependent heme receptor 1792035 hasR 2883278 hasR Pectobacterium atrosepticum SCRI1043 TonB-dependent heme receptor YP_049640.1 1789357 R 218491 CDS YP_049641.1 50120474 2881334 complement(1792295..1793263) 1 NC_004547.2 Similar to Pseudomonas aeruginosa probable transmembrane sensor pa3409 SWALL:Q9HYJ6 (EMBL:AE004762) (328 aa) fasta scores: E(): 2.2e-40, 42.68% id in 328 aa, and to Pseudomonas putida transmembrane sensor, pp4607 SWALL:AAN70180 (EMBL:AE016791) (326 aa) fasta scores: E(): 2.6e-25, 36.13% id in 321 aa; transmembrane sensor protein 1793263 2881334 ECA1539 Pectobacterium atrosepticum SCRI1043 transmembrane sensor protein YP_049641.1 1792295 R 218491 CDS YP_049642.1 50120475 2882552 complement(1793363..1793872) 1 NC_004547.2 Similar to Pseudomonas aeruginosa RNA polymerase sigma factor pa3410 SWALL:Q9HYJ5 (EMBL:AE004762) (171 aa) fasta scores: E(): 9.6e-18, 41.76% id in 170 aa, and to Pseudomonas putida RNA polymerase sigma-70 factor, ECF subfamily pp1008 SWALL:AAN66633 (EMBL:AE016777) (170 aa) fasta scores: E(): 1.7e-11, 36.52% id in 167 aa; ECF sigma factor 1793872 2882552 ECA1540 Pectobacterium atrosepticum SCRI1043 ECF sigma factor YP_049642.1 1793363 R 218491 CDS YP_049643.1 50120476 2882553 1794063..1794224 1 NC_004547.2 no significant database matches; hypothetical protein 1794224 2882553 ECA1541 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049643.1 1794063 D 218491 CDS YP_049644.1 50120477 2882554 1794345..1795769 1 NC_004547.2 catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; gamma-aminobutyraldehyde dehydrogenase 1795769 2882554 ECA1542 Pectobacterium atrosepticum SCRI1043 gamma-aminobutyraldehyde dehydrogenase YP_049644.1 1794345 D 218491 CDS YP_049645.2 161501879 2881475 1796072..1797505 1 NC_004547.2 catalyzes the formation of 4-aminobutyraldehyde from putrescine and 2-oxoglutarate; putrescine--2-oxoglutarate aminotransferase 1797505 2881475 ECA1543 Pectobacterium atrosepticum SCRI1043 putrescine--2-oxoglutarate aminotransferase YP_049645.2 1796072 D 218491 CDS YP_049646.1 50120479 2881476 complement(1797750..1798736) 1 NC_004547.2 Similar to Rhodobacter capsulatus hydroxyneurosporene methyltransferase CrtF SWALL:CRTF_RHOCA (SWALL:P17061) (393 aa) fasta scores: E(): 7.1e-08, 26.82% id in 328 aa, and to Pseudomonas stutzeri methyltransferase pdtorfP SWALL:Q9L8Q2 (EMBL:AF196567) (351 aa) fasta scores: E(): 2.5e-32, 39.88% id in 336 aa; methyltransferase 1798736 2881476 ECA1544 Pectobacterium atrosepticum SCRI1043 methyltransferase YP_049646.1 1797750 R 218491 CDS YP_049647.1 50120480 2881477 1798859..1799794 1 NC_004547.2 Similar to Neisseria meningitidis AraC-family transcriptional regulator nma0578 SWALL:Q9JW23 (EMBL:AL162753) (318 aa) fasta scores: E(): 2.2e-06, 26.26% id in 316 aa, and to Pseudomonas stutzeri transcriptional activator pdtorfC SWALL:Q9L8R1 (EMBL:AF196567) (235 aa) fasta scores: E(): 2e-15, 35.65% id in 230 aa; AraC family transcriptional regulator 1799794 2881477 ECA1545 Pectobacterium atrosepticum SCRI1043 AraC family transcriptional regulator YP_049647.1 1798859 D 218491 CDS YP_049648.1 50120481 2885409 1800077..1801579 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 proline/betaine transporter ProP or b4111 or z5713 or ecs5093 SWALL:PROP_ECOLI (SWALL:P30848) (500 aa) fasta scores: E(): 9.5e-152, 75.9% id in 498 aa; proline/glycine betaine transporter 1801579 proP 2885409 proP Pectobacterium atrosepticum SCRI1043 proline/glycine betaine transporter YP_049648.1 1800077 D 218491 CDS YP_049649.1 50120482 2884192 complement(1801686..1803146) 1 NC_004547.2 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; AMP nucleosidase 1803146 amn 2884192 amn Pectobacterium atrosepticum SCRI1043 AMP nucleosidase YP_049649.1 1801686 R 218491 CDS YP_049650.1 50120483 2881478 complement(1803281..1805059) 1 NC_004547.2 Similar to Streptomyces coelicolor transport system permease protein sco6645 or sc4g2.19 SWALL:O86691 (EMBL:AL939128) (601 aa) fasta scores: E(): 9.4e-94, 50.35% id in 562 aa, and to Agrobacterium tumefaciens ABC transporter, membrane spanning protein nikb or atu1198 or agr_c_2209 SWALL:Q8UG44 (EMBL:AE009082) (314 aa) fasta scores: E(): 3.6e-20, 31.33% id in 300 aa; transport system membrane protein 1805059 2881478 ECA1548 Pectobacterium atrosepticum SCRI1043 transport system membrane protein YP_049650.1 1803281 R 218491 CDS YP_049651.1 50120484 2881989 complement(1805097..1806608) 1 NC_004547.2 Similar to Streptomyces coelicolor solute-binding lipoprotein sco6644 or sc4g2.18 SWALL:O86690 (EMBL:AL939128) (503 aa) fasta scores: E(): 1.4e-76, 46.09% id in 486 aa, and to Agrobacterium tumefaciens ABC transporter, substrate binding protein atu1202 or agr_c_2215 SWALL:Q8UG40 (EMBL:AE009083) (509 aa) fasta scores: E(): 4.9e-23, 33.63% id in 440 aa; ABC transporter substrate-binding protein 1806608 2881989 ECA1549 Pectobacterium atrosepticum SCRI1043 ABC transporter substrate-binding protein YP_049651.1 1805097 R 218491 CDS YP_049652.1 50120485 2881990 complement(1806619..1807866) 1 NC_004547.2 Similar to Streptomyces coelicolor transport system permease protein sco6646 or sc4g2.20 SWALL:O86692 (EMBL:AL939128) (436 aa) fasta scores: E(): 5e-56, 43.9% id in 394 aa, and to Mycobacterium tuberculosis membrane transport protein rv0849 or mtv043.42 SWALL:O53861 (EMBL:AL022004) (419 aa) fasta scores: E(): 9.5e-37, 35.88% id in 379 aa; transport system membrane protein 1807866 2881990 ECA1550 Pectobacterium atrosepticum SCRI1043 transport system membrane protein YP_049652.1 1806619 R 218491 CDS YP_049653.1 50120486 2881991 complement(1807954..1808781) 1 NC_004547.2 Similar to Agrobacterium tumefaciens ABC transporter, nucleotide binding/ATPase protein atu3437 or agr_l_2779 SWALL:Q8UAD7 (EMBL:AE009274) (311 aa) fasta scores: E(): 1.9e-27, 43.86% id in 228 aa, and to Brucella suis peptide ABC transporter, ATP-binding protein bra0404 SWALL:AAN33601 (EMBL:AE014539) (317 aa) fasta scores: E(): 7.6e-26, 35.52% id in 259 aa; ABC transporter ATP-binding protein 1808781 2881991 ECA1551 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_049653.1 1807954 R 218491 CDS YP_049654.1 50120487 2881969 complement(1808781..1809659) 1 NC_004547.2 Similar to Bifidobacterium longum probable ATP-binding protein of ABC transporter system for peptides OppD or bl1158 SWALL:AAN24963 (EMBL:AE014740) (263 aa) fasta scores: E(): 4.5e-27, 43.08% id in 253 aa, and to Corynebacterium efficiens ABC transporter ATP-binding protein ce2227 SWALL:BAC19037 (EMBL:AP005221) (491 aa) fasta scores: E(): 1.1e-25, 41.12% id in 248 aa; ABC transporter ATP-binding protein 1809659 2881969 ECA1552 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_049654.1 1808781 R 218491 CDS YP_049655.1 50120488 2881970 complement(1809799..>1810206) 1 NC_004547.2 Partial CDS. Similar to the C-terminal region of Photorhabdus luminescens transposase Tnp SWALL:AAN64216 (EMBL:AY144118) (328 aa) fasta scores: E(): 0.00016, 32.39% id in 142 aa, and to Salmonella typhimurium transposase stm0479 SWALL:Q8ZRA4 (EMBL:AE008718) (311 aa) fasta scores: E(): 1.9e-09, 32.03% id in 128 aa; transposase (partial) >1810206 2881970 ECA1553 Pectobacterium atrosepticum SCRI1043 transposase (partial) YP_049655.1 1809799 R 218491 CDS YP_049656.1 50120489 2881971 complement(1810381..1810557) 1 NC_004547.2 Doubtful CDS. No significant database matches; hypothetical protein 1810557 2881971 ECA1554 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049656.1 1810381 R 218491 CDS YP_049657.1 50120490 2881378 complement(1810590..1812383) 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein Pa2336 SWALL:Q9I1E2 (EMBL:AE004659) (446 aa) fasta scores: E(): 5.1e-44, 39.82% id in 467 aa, and to Salmonella typhimurium pqq enzyme repeat stm3632 SWALL:Q8ZLA7 (EMBL:AE008868) (374 aa) fasta scores: E(): 9e-07, 30.04% id in 406 aa; hypothetical protein 1812383 2881378 ECA1555 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049657.1 1810590 R 218491 CDS YP_049658.1 50120491 2882885 complement(1812400..1813209) 1 NC_004547.2 Similar to Pseudomonas putida AtsC SWALL:Q9WWU7 (EMBL:AF126201) (287 aa) fasta scores: E(): 2.6e-52, 63.59% id in 239 aa, and to Bacillus subtilis aliphatic sulfonates transport ATP-binding protein SsuB SWALL:SSUB_BACSU (SWALL:P97027) (274 aa) fasta scores: E(): 1.4e-34, 43.72% id in 247 aa, and to; sulfate ester transporter ATP-binding protein 1813209 astC 2882885 astC Pectobacterium atrosepticum SCRI1043 sulfate ester transporter ATP-binding protein YP_049658.1 1812400 R 218491 CDS YP_049659.1 50120492 2881975 complement(1813206..1814795) 1 NC_004547.2 Similar to Pseudomonas putida AtsB SWALL:Q9R9W6 (EMBL:AF126201) (535 aa) fasta scores: E(): 1.1e-103, 55.88% id in 510 aa, and to Bacillus subtilis aliphatic sulfonates transport permease protein SsuC SWALL:SSUC_BACSU (SWALL:P40401) (276 aa) fasta scores: E(): 1.6e-23, 36.14% id in 249 aa; sulfate ester transporter permease 1814795 atsB 2881975 atsB Pectobacterium atrosepticum SCRI1043 sulfate ester transporter permease YP_049659.1 1813206 R 218491 CDS YP_049660.1 50120493 2881977 1815034..1816164 1 NC_004547.2 Similar to Pseudomonas putida AtsR SWALL:Q9WWU6 (EMBL:AF126201) (347 aa) fasta scores: E(): 2.2e-49, 45.8% id in 334 aa, and to Bacillus subtilis aliphatic sulfonates binding protein precursor SsuA SWALL:SSUA_BACSU (SWALL:P40400) (332 aa) fasta scores: E(): 9.5e-14, 26.68% id in 341 aa; sulfate ester transporter periplasmic-binding component 1816164 atsR 2881977 atsR Pectobacterium atrosepticum SCRI1043 sulfate ester transporter periplasmic-binding component YP_049660.1 1815034 D 218491 CDS YP_049661.1 50120494 2884397 complement(1816177..1817115) 1 NC_004547.2 Similar to Pseudomonas putida SftR SWALL:Q9WWU4 (EMBL:AF126201) (304 aa) fasta scores: E(): 1.2e-43, 42.19% id in 301 aa, and to Pseudomonas sp. SDS degradation transcriptional activation protein sdsB SWALL:SDSB_PSES9 (SWALL:P52686) (306 aa) fasta scores: E(): 1.3e-30, 36.53% id in 312 aa; LysR family transcriptional regulator 1817115 sftR 2884397 sftR Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_049661.1 1816177 R 218491 CDS YP_049662.1 50120495 2881832 complement(1817266..1818024) 1 NC_004547.2 Similar to Escherichia coli CDP-diacylglycerol pyrophosphatase Cdh or b3918 SWALL:CDH_ECOLI (SWALL:P06282) (251 aa) fasta scores: E(): 7.1e-40, 43.65% id in 252 aa; CDP-diacylglycerol pyrophosphatase 1818024 cdh 2881832 cdh Pectobacterium atrosepticum SCRI1043 CDP-diacylglycerol pyrophosphatase YP_049662.1 1817266 R 218491 CDS YP_049663.1 50120496 2881379 complement(1818553..1819290) 1 NC_004547.2 Similar to Erwinia chrysanthemi transcriptional activator protein EchR SWALL:ECHR_ERWCH (SWALL:Q46967) (250 aa) fasta scores: E(): 5e-67, 72.35% id in 246 aa, and to Erwinia carotovora transcriptional activator protein ExpR SWALL:EXPR_ERWCA (SWALL:Q47189) (245 aa) fasta scores: E(): 1.3e-57, 59.5% id in 242 aa. Also similar to ECA0106 (ExpR) (67.839% in 199 aa overlap); quorum-sensing transcriptional regulator 1819290 2881379 ECA1561 Pectobacterium atrosepticum SCRI1043 quorum-sensing transcriptional regulator YP_049663.1 1818553 R 218491 CDS YP_049664.1 50120497 2881380 1819842..1820456 1 NC_004547.2 Similar to Xanthomonas campestris transcriptional regulator xcc2684 SWALL:Q8P7C7 (EMBL:AE012381) (205 aa) fasta scores: E(): 8.3e-18, 33.49% id in 203 aa, and to Vibrio cholerae transcriptional regulator, tetr family vc1408 SWALL:Q9KS52 (EMBL:AE004219) (200 aa) fasta scores: E(): 2e-17, 38.94% id in 190 aa; TetR family transcriptional regulator 1820456 2881380 ECA1562 Pectobacterium atrosepticum SCRI1043 TetR family transcriptional regulator YP_049664.1 1819842 D 218491 CDS YP_049665.1 50120498 2885257 complement(1820434..1821057) 1 NC_004547.2 Similar to Ralstonia solanacearum hypothetical protein rsc0600 rsc0600 or rs04845 SWALL:Q8Y1T9 (EMBL:AL646060) (211 aa) fasta scores: E(): 3.1e-14, 35.29% id in 187 aa, and to Pseudomonas putida conserved domain protein pp2578 SWALL:AAN68186 (EMBL:AE016783) (176 aa) fasta scores: E(): 1.9e-07, 32.5% id in 200 aa; lipoprotein 1821057 2885257 ECA1563 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_049665.1 1820434 R 218491 CDS YP_049666.1 50120499 2885258 complement(1821054..1822700) 1 NC_004547.2 Similar to Burkholderia pseudomallei paraquat-inducible protein lpw206-207 SWALL:Q93M60 (EMBL:AY027530) (553 aa) fasta scores: E(): 1.3e-86, 45.97% id in 522 aa, and to Escherichia coli paraquat-inducible protein B PqiB or Pqi5b or b0951 SWALL:PQIB_ECOLI (SWALL:P43671) (546 aa) fasta scores: E(): 8.2e-45, 29.69% id in 532 aa; paraquat-inducible protein 1822700 2885258 ECA1564 Pectobacterium atrosepticum SCRI1043 paraquat-inducible protein YP_049666.1 1821054 R 218491 CDS YP_049667.1 50120500 2885259 complement(1822697..1823320) 1 NC_004547.2 Similar to Pseudomonas aeruginosa paraquat-inducible protein a SWALL:Q9APY1 (EMBL:AF241171) (237 aa) fasta scores: E(): 2.7e-27, 41.88% id in 191 aa, and to the C-terminal region of Escherichia coli, Escherichia coli O6, and Shigella flexneri paraquat-inducible protein a PqiA or Pqi5a or b0950 or c1086 or sf0951 SWALL:PQIA_ECOLI (SWALL:P43670) (417 aa) fasta scores: E(): 3.4e-26, 42.71% id in 199 aa; paraquat-inducible membrane protein 1823320 2885259 ECA1565 Pectobacterium atrosepticum SCRI1043 paraquat-inducible membrane protein YP_049667.1 1822697 R 218491 CDS YP_049668.1 50120501 2885774 complement(1823310..1823960) 1 NC_004547.2 Similar to Ralstonia solanacearum probable transmembrane protein rsc0603 or rs04842 SWALL:Q8Y1T6 (EMBL:AL646060) (292 aa) fasta scores: E(): 4.1e-18, 32.27% id in 189 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri paraquat-inducible protein a pqia or pqi5a or b0950 or c1086 or sf0951 SWALL:PQIA_ECOLI (SWALL:P43670) (417 aa) fasta scores: E(): 3.4e-07, 23.4% id in 188 aa; hypothetical protein 1823960 2885774 ECA1566 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049668.1 1823310 R 218491 CDS YP_049669.1 50120502 2885775 complement(1823984..1824646) 1 NC_004547.2 Similar to Ralstonia solanacearum probable lipoprotein rsc2561 or rs00746 SWALL:Q8XWB3 (EMBL:AL646070) (220 aa) fasta scores: E(): 2.1e-43, 56.22% id in 217 aa, and to Bradyrhizobium japonicum Blr1214 protein blr1214 SWALL:BAC46479 (EMBL:AP005939) (220 aa) fasta scores: E(): 9.6e-41, 54.58% id in 207 aa; lipoprotein 1824646 2885775 ECA1567 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_049669.1 1823984 R 218491 CDS YP_049670.1 50120503 2885776 1825190..1826161 1 NC_004547.2 Similar to Vibrio fischeri CheV SWALL:AAL86625 (EMBL:AY079167) (306 aa) fasta scores: E(): 1.6e-26, 34.36% id in 323 aa, and to Salmonella typhimurium chemotaxis signal transduction protein stm2314 SWALL:Q8ZNE6 (EMBL:AE008803) (333 aa) fasta scores: E(): 8.2e-81, 70.44% id in 318 aa; chemotaxis signal transduction protein 1826161 2885776 ECA1568 Pectobacterium atrosepticum SCRI1043 chemotaxis signal transduction protein YP_049670.1 1825190 D 218491 CDS YP_049671.1 50120504 2885777 complement(1826507..1827346) 1 NC_004547.2 YghU; B2989; one of eight glutathione transferase proteins from E. coli; glutathione S-transferase 1827346 2885777 ECA1570 Pectobacterium atrosepticum SCRI1043 glutathione S-transferase YP_049671.1 1826507 R 218491 CDS YP_049672.1 50120505 2884313 complement(1827745..1828749) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri threonine dehydratase catabolic TdcB or b3117 or c3875 or z4469 or ecs3997 or sf3157 SWALL:THD2_ECOLI (SWALL:P05792) (329 aa) fasta scores: E(): 9.6e-33, 38.14% id in 312 aa, and to Thermotoga maritima threonine dehydratase catabolic tm0356 SWALL:Q9WYJ1 (EMBL:AE001716) (401 aa) fasta scores: E(): 6.1e-41, 41.32% id in 317 aa; threonine dehydratase catabolic 1828749 tdcB 2884313 tdcB Pectobacterium atrosepticum SCRI1043 threonine dehydratase catabolic YP_049672.1 1827745 R 218491 CDS YP_049673.1 50120506 2884901 1828802..1829152 1 NC_004547.2 Similar to Bradyrhizobium japonicum transcriptional regulatory protein blr1414 SWALL:BAC46679 (EMBL:AP005940) (100 aa) fasta scores: E(): 1e-13, 52.22% id in 90 aa, and to Rhizobium loti hypothetical protein Mll3509 mll3509 SWALL:Q98G33 (EMBL:AP003002) (100 aa) fasta scores: E(): 1.1e-15, 47.87% id in 94 aa; transcriptional regulator ArsR 1829152 2884901 ECA1572 Pectobacterium atrosepticum SCRI1043 transcriptional regulator ArsR YP_049673.1 1828802 D 218491 CDS YP_049674.1 50120507 2884902 complement(1829217..1830416) 1 NC_004547.2 Similar to Escherichia coli bicyclomycin resistance protein Bcr or BicA or BicR or Sur or SuxA or b2182 SWALL:BCR_ECOLI (SWALL:P28246) (396 aa) fasta scores: E(): 5e-40, 31.1% id in 389 aa, and to Ralstonia solanacearum probable transport transmembrane protein rsc0216 or rs00648 SWALL:Q8Y2W6 (EMBL:AL646058) (409 aa) fasta scores: E(): 7.1e-61, 45.26% id in 380 aa; transporter 1830416 2884902 ECA1573 Pectobacterium atrosepticum SCRI1043 transporter YP_049674.1 1829217 R 218491 CDS YP_049675.1 50120508 2884903 complement(1830586..1831821) 1 NC_004547.2 Similar to Rhizobium meliloti transport protein r00217 or smc02892 SWALL:Q92SY1 (EMBL:AL591782) (492 aa) fasta scores: E(): 9.3e-32, 44.06% id in 438 aa, and to Rhizobium loti probable transmembrane efflux protein mlr1142 SWALL:Q98L80 (EMBL:AP002996) (490 aa) fasta scores: E(): 4.9e-27, 37.55% id in 466 aa; transporter 1831821 2884903 ECA1574 Pectobacterium atrosepticum SCRI1043 transporter YP_049675.1 1830586 R 218491 CDS YP_049676.1 50120509 2884530 1831876..1832349 1 NC_004547.2 Similar to Rhizobium leguminosarum transcriptional regulator HmrR SWALL:HMMR_RHILV (SWALL:Q9X5V4) (129 aa) fasta scores: E(): 3.2e-07, 33.6% id in 125 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa5116 SWALL:Q9HU68 (EMBL:AE004924) (141 aa) fasta scores: E(): 1.4e-21, 54.03% id in 124 aa; MerR family transcriptional regulator 1832349 2884530 ECA1575 Pectobacterium atrosepticum SCRI1043 MerR family transcriptional regulator YP_049676.1 1831876 D 218491 CDS YP_049677.1 50120510 2884531 1832392..1832559 1 NC_004547.2 no significant database matches; hypothetical protein 1832559 2884531 ECA1576 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049677.1 1832392 D 218491 CDS YP_049678.1 50120511 2884532 1832682..1833305 1 NC_004547.2 Weakly similar to Xylella fastidiosa hypothetical protein Xf2750 xf2750 SWALL:Q9P9X0 (EMBL:AE004081) (201 aa) fasta scores: E(): 6.5, 24.61% id in 195 aa; lipoprotein 1833305 2884532 ECA1577 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_049678.1 1832682 D 218491 CDS YP_049679.1 50120512 2884522 1833671..1834210 1 NC_004547.2 Similar to Yersinia pestis nucleoprotein/polynucleotide-associated enzyme y2589 SWALL:AAM86144 (EMBL:AE013861) (179 aa) fasta scores: E(): 8.1e-50, 93.29% id in 179 aa, and to Salmonella typhimurium, and Salmonella typhi cytoplasmic protein stm4192 or sty4409 SWALL:Q8XF14 (EMBL:AE008896) (179 aa) fasta scores: E(): 3.5e-48, 88.26% id in 179 aa; hypothetical protein 1834210 2884522 ECA1578 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049679.1 1833671 D 218491 CDS YP_049680.1 50120513 2884523 1834370..1835260 1 NC_004547.2 catalyzes the formation of 2-dehydropantoate from (R)-pantoate; 2-dehydropantoate 2-reductase 1835260 2884523 ECA1579 Pectobacterium atrosepticum SCRI1043 2-dehydropantoate 2-reductase YP_049680.1 1834370 D 218491 CDS YP_049681.1 50120514 2884524 1835450..1835932 1 NC_004547.2 Similar to Myxococcus xanthus CspB SWALL:Q9ZFK8 (EMBL:AF098529) (66 aa) fasta scores: E(): 0.057, 39.7% id in 68 aa, and to Yersinia pestis cold-shock protein y1165 SWALL:AAM84742 (EMBL:AE013720) (163 aa) fasta scores: E(): 2.6e-35, 66.24% id in 157 aa; cold-shock protein 1835932 2884524 ECA1580 Pectobacterium atrosepticum SCRI1043 cold-shock protein YP_049681.1 1835450 D 218491 CDS YP_049682.1 50120515 2884727 1836065..1836310 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri hypothetical protein ymja or b1295 or sf1300 SWALL:YMJA_ECOLI (SWALL:P76036) (81 aa) fasta scores: E(): 1.5e-20, 72.84% id in 81 aa; hypothetical protein 1836310 2884727 ECA1581 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049682.1 1836065 D 218491 CDS YP_049683.1 50120516 2884728 <1836537..1836671 1 NC_004547.2 Partial CDS. Similar to the N-terminal regions of Escherichia coli probable transposase for transposon tn903 SWALL:TRA2_ECOLI (SWALL:P03009) (307 aa) fasta scores: E(): 2.8e-09, 74.41% id in 43 aa, and to Bacteriophage HK022 is903 transposase SWALL:Q9MCT5 (EMBL:AF069308) (307 aa) fasta scores: E(): 2.8e-09, 74.41% id in 43 aa; transposase (partial) 1836671 2884728 ECA1582 Pectobacterium atrosepticum SCRI1043 transposase (partial) YP_049683.1 <1836537 D 218491 CDS YP_049684.1 50120517 2884729 complement(1836751..>1837002) 1 NC_004547.2 Partial CDS. Similar to Salmonella typhimurium integrase protein stm0947 SWALL:Q8ZQE2 (EMBL:AE008740) (227 aa) fasta scores: E(): 0.0015, 57.89% id in 38 aa, and to Pseudomonas syringae ispsy11, transposase orfb pspto4511 SWALL:AAO57959 (EMBL:AE016872) (265 aa) fasta scores: E(): 0.03, 35.38% id in 65 aa; integrase >1837002 2884729 ECA1583 Pectobacterium atrosepticum SCRI1043 integrase YP_049684.1 1836751 R 218491 CDS YP_049685.1 50120518 2884747 complement(1837757..1837906) 1 NC_004547.2 Similar to Anabaena sp. hypothetical protein Asl3923 SWALL:Q8YQB0 (EMBL:AP003594) (53 aa) fasta scores: E(): 1.3e-11, 63.63% id in 44 aa, and to Synechococcus elongatus Tsr2277 protein tsr2277 SWALL:Q8DGN9 (EMBL:AP005376) (51 aa) fasta scores: E(): 1.2e-10, 56.09% id in 41 aa; hypothetical protein 1837906 2884747 ECA1584 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049685.1 1837757 R 218491 CDS YP_049686.1 50120519 2884748 complement(1837903..1839441) 1 NC_004547.2 Similar to Pseudomonas putida conserved hypothetical protein pp2732 SWALL:AAN68340 (EMBL:AE016784) (508 aa) fasta scores: E(): 1.6e-149, 66.86% id in 507 aa, and to Caulobacter crescentus hypothetical protein Cc0646 SWALL:Q9AAF5 (EMBL:AE005740) (509 aa) fasta scores: E(): 9.5e-105, 50.39% id in 502 aa; hypothetical protein 1839441 2884748 ECA1585 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049686.1 1837903 R 218491 CDS YP_049687.1 50120520 2884749 1840176..1840934 1 NC_004547.2 Similar to Ralstonia solanacearum probable dehydrogenase/reductase oxidoreductase protein rsc2597 or rs00845 SWALL:Q8XW78 (EMBL:AL646070) (252 aa) fasta scores: E(): 7.9e-79, 84.92% id in 252 aa, and to Xanthomonas campestris reductase xcc3212 SWALL:Q8P5X1 (EMBL:AE012438) (276 aa) fasta scores: E(): 1.6e-41, 52.19% id in 251 aa; short chain dehydrogenase 1840934 2884749 ECA1586 Pectobacterium atrosepticum SCRI1043 short chain dehydrogenase YP_049687.1 1840176 D 218491 CDS YP_049688.1 50120521 2884750 1840982..1841674 1 NC_004547.2 Similar to Sus scrofa glutathione transferase omega 1 gsto1 SWALL:GTO1_PIG (SWALL:Q9N1F5) (241 aa) fasta scores: E(): 4.1e-14, 29.29% id in 198 aa, and to Ralstonia solanacearum probable glutathione-s-transferase protein rsc2594 or rs00842 SWALL:Q8XW81 (EMBL:AL646070) (224 aa) fasta scores: E(): 3.2e-61, 70.08% id in 224 aa; glutathione-S-transferase 1841674 2884750 ECA1587 Pectobacterium atrosepticum SCRI1043 glutathione-S-transferase YP_049688.1 1840982 D 218491 CDS YP_049689.1 50120522 2884645 1841727..1842110 1 NC_004547.2 Similar to Ralstonia solanacearum hypothetical protein rsc2590 or rs00838 SWALL:Q8XW85 (EMBL:AL646070) (128 aa) fasta scores: E(): 7.4e-27, 59.35% id in 123 aa, and to Caulobacter crescentus hypothetical protein Cc2961 SWALL:Q9A482 (EMBL:AE005960) (129 aa) fasta scores: E(): 0.0056, 34.14% id in 123 aa; hypothetical protein 1842110 2884645 ECA1588 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049689.1 1841727 D 218491 CDS YP_049690.1 50120523 2883336 complement(1842241..1847037) 1 NC_004547.2 similar to the DNA and RNA helicase superfamily II and eukaryotic DEAD family of helicases; longest known protein in E. coli; ATP-dependent helicase Lhr 1847037 lhr 2883336 lhr Pectobacterium atrosepticum SCRI1043 ATP-dependent helicase Lhr YP_049690.1 1842241 R 218491 CDS YP_049691.1 50120524 2884646 complement(1847045..1847386) 1 NC_004547.2 Similar to Rhizobium loti hypothetical protein Mlr0026 SWALL:Q98NQ9 (EMBL:AP002994) (107 aa) fasta scores: E(): 2.7e-08, 34.61% id in 104 aa, and to Caulobacter crescentus hypothetical protein Cc0401 SWALL:Q9AB33 (EMBL:AE005713) (127 aa) fasta scores: E(): 1e-06, 29.78% id in 94 aa; hypothetical protein 1847386 2884646 ECA1590 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049691.1 1847045 R 218491 CDS YP_049692.1 50120525 2884647 complement(1847462..1848211) 1 NC_004547.2 Similar over its C-terminal region to many including Salmonella typhimurium cytoplasmic protein ybdf or stm0579 SWALL:Q8ZR44 (EMBL:AE008722) (122 aa) fasta scores: E(): 1.8e-09, 33.89% id in 118 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein ybdf or b0579 or z0718 or ecs0617 SWALL:YBDF_ECOLI (SWALL:P39454) (122 aa) fasta scores: E(): 2.2e-07, 33.04% id in 115 aa; hypothetical protein 1848211 2884647 ECA1591 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049692.1 1847462 R 218491 CDS YP_049693.1 50120526 2884774 complement(1848239..1849141) 1 NC_004547.2 Similar to Streptomyces hygroscopicus acetyl-hydrolase Bah SWALL:BAH_STRHY (SWALL:Q01109) (299 aa) fasta scores: E(): 8.6e-34, 43.01% id in 265 aa, and to Streptomyces viridochromogenes N-acetylphosphinothricin-tripetide- deacetylase Dea SWALL:Q56171 (EMBL:X65195) (299 aa) fasta scores: E(): 1.7e-33, 43.34% id in 263 aa; acetyl-hydrolase 1849141 2884774 ECA1592 Pectobacterium atrosepticum SCRI1043 acetyl-hydrolase YP_049693.1 1848239 R 218491 CDS YP_049694.1 50120527 2884775 1849384..1850334 1 NC_004547.2 Similar to Xanthomonas campestris transcriptional regulator xcc3932 SWALL:Q8P3Y5 (EMBL:AE012514) (317 aa) fasta scores: E(): 2.6e-22, 42.58% id in 310 aa; AraC family transcriptional regulator 1850334 2884775 ECA1593 Pectobacterium atrosepticum SCRI1043 AraC family transcriptional regulator YP_049694.1 1849384 D 218491 CDS YP_049695.1 50120528 2884776 1850490..1850948 1 NC_004547.2 no significant database matches; hypothetical protein 1850948 2884776 ECA1594 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049695.1 1850490 D 218491 CDS YP_049696.1 50120529 2885051 1851097..1851453 1 NC_004547.2 Similar to Ralstonia solanacearum hypothetical protein rsc2592 or rs00840 SWALL:Q8XW83 (EMBL:AL646070) (118 aa) fasta scores: E(): 2.1e-19, 43.96% id in 116 aa, and to Oceanobacillus iheyensis hypothetical conserved protein ob1254 SWALL:BAC13210 (EMBL:AP004597) (118 aa) fasta scores: E(): 2.9e-19, 41.02% id in 117 aa; hypothetical protein 1851453 2885051 ECA1595 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049696.1 1851097 D 218491 CDS YP_049697.1 50120530 2885052 complement(1851992..1853839) 1 NC_004547.2 Weakly similar to Thermoplasma volcanium hypothetical protein tv0230 or tvg0239138 SWALL:Q97C74 (EMBL:AP000991) (511 aa) fasta scores: E(): 1.4e-09, 22.16% id in 582 aa, and to Xanthomonas axonopodis hypothetical protein Xac2444 SWALL:Q8PJT6 (EMBL:AE011881) (705 aa) fasta scores: E(): 5.9e-09, 24.46% id in 556 aa; hypothetical protein 1853839 2885052 ECA1596 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049697.1 1851992 R 218491 CDS YP_049698.1 50120531 2885053 complement(1853836..1854879) 1 NC_004547.2 no significant database matches; hypothetical protein 1854879 2885053 ECA1597 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049698.1 1853836 R 218491 CDS YP_049699.1 50120532 2883933 1855523..1856875 1 NC_004547.2 Similar to Bacillus anthracis pxo2-73 bxb0100 SWALL:Q9RMW1 (EMBL:AF188935) (541 aa) fasta scores: E(): 2.2e-22, 31.18% id in 356 aa, and to Streptococcus agalactiae protein of unknown function sag1992 SWALL:AAN00852 (EMBL:AE014281) (518 aa) fasta scores: E(): 8.7e-09, 32.91% id in 237 aa; hypothetical protein 1856875 2883933 ECA1598 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049699.1 1855523 D 218491 CDS YP_049700.1 50120533 2884147 1857403..1858335 1 NC_004547.2 Similar to Escherichia coli ArdC antirestriction protein ArdC SWALL:Q9R2K1 (EMBL:AF143206) (297 aa) fasta scores: E(): 2.2e-39, 47.69% id in 239 aa; antirestriction protein 1858335 ardC 2884147 ardC Pectobacterium atrosepticum SCRI1043 antirestriction protein YP_049700.1 1857403 D 218491 CDS YP_049701.1 50120534 2883934 <1858446..1858988 1 NC_004547.2 Partial CDS. Similar to the C-terminal regions of Salmonella typhi is30 transposase r0046 SWALL:AAF69884 (EMBL:AF250878) (383 aa) fasta scores: E(): 2.5e-31, 51.22% id in 164 aa, and to Escherichia coli transposase insi for insertion sequence element is30b/c/d (insi1 or b0256) and (insi2 or b1404) and (insi3 or b4284) SWALL:INSI_ECOLI (SWALL:P37246) (383 aa) fasta scores: E(): 2.5e-31, 51.22% id in 164 aa; transposase (partial) 1858988 2883934 ECA1601 Pectobacterium atrosepticum SCRI1043 transposase (partial) YP_049701.1 <1858446 D 218491 CDS YP_049702.1 50120535 2883935 complement(1859015..1859923) 1 NC_004547.2 Similar to Pseudomonas fluorescens transcriptional regulator SWALL:AAN32873 (EMBL:AF461725) (238 aa) fasta scores: E(): 4.6e-57, 60.92% id in 238 aa, and to Ralstonia solanacearum probable transcription regulator transcription regulator protein rsp1593 or rs02150 SWALL:Q8XPP5 (EMBL:AL646085) (296 aa) fasta scores: E(): 6e-39, 40.13% id in 294 aa. Also similar to ECA2976 (96.026% id. in 302 aa overlap); LysR family transcriptional regulator 1859923 2883935 ECA1602 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_049702.1 1859015 R 218491 CDS YP_049703.1 50120536 2884125 complement(1860348..1860773) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri arsenate reductase ArsC or ArsG or b3503 or sf3536 SWALL:ARSC_ECOLI (SWALL:P37311) (141 aa) fasta scores: E(): 1.1e-44, 81.56% id in 141 aa; arsenate reductase 1860773 arsC 2884125 arsC Pectobacterium atrosepticum SCRI1043 arsenate reductase YP_049703.1 1860348 R 218491 CDS YP_049704.1 50120537 2884124 complement(1860786..1862075) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri arsenical pump membrane protein ArsB or ArsF or b3502 or z4904 or ecs4374 or sf3535 SWALL:ARSB_ECOLI (SWALL:P37310) (429 aa) fasta scores: E(): 1.3e-139, 85.54% id in 429 aa; arsenical pump membrane protein 1862075 arsB 2884124 arsB Pectobacterium atrosepticum SCRI1043 arsenical pump membrane protein YP_049704.1 1860786 R 218491 CDS YP_049705.1 50120538 2884117 complement(1862120..1862440) 1 NC_004547.2 regulates the expression of of the arsRBC involved in resistance to arsenic; DNA-binding transcriptional repressor ArsR 1862440 arsR 2884117 arsR Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional repressor ArsR YP_049705.1 1862120 R 218491 CDS YP_049706.1 50120539 2884116 1862527..1863225 1 NC_004547.2 Similar to Yersinia enterocolitica ArsH SWALL:P74987 (EMBL:U58366) (232 aa) fasta scores: E(): 2.8e-86, 91.81% id in 232 aa, and to Salmonella typhimurium ArsH protein SWALL:Q8L245 (EMBL:AP005147) (216 aa) fasta scores: E(): 6.4e-69, 80.09% id in 211 aa; arsenical resistance protein 1863225 arsH 2884116 arsH Pectobacterium atrosepticum SCRI1043 arsenical resistance protein YP_049706.1 1862527 D 218491 CDS YP_049707.1 50120540 2883904 complement(1863343..1863630) 1 NC_004547.2 no significant database matches; hypothetical protein 1863630 2883904 ECA1607 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049707.1 1863343 R 218491 CDS YP_049708.1 50120541 2885445 complement(1863738..1864484) 1 NC_004547.2 Similar to Enterobacter cloacae MobC protein SWALL:Q9REB5 (EMBL:AJ224861) (243 aa) fasta scores: E(): 7.6e-14, 31.05% id in 219 aa; mobilization protein 1864484 mobC 2885445 mobC Pectobacterium atrosepticum SCRI1043 mobilization protein YP_049708.1 1863738 R 218491 CDS YP_049709.1 50120542 2883905 complement(1864495..1866396) 1 NC_004547.2 Similar to Enterobacter cloacae MobB protein SWALL:Q9REB6 (EMBL:AJ224861) (653 aa) fasta scores: E(): 1.1e-40, 29.89% id in 582 aa, and to Escherichia coli mobilization protein A MobA or B SWALL:MBA1_ECOLI (SWALL:P08098) (529 aa) fasta scores: E(): 1.8e-18, 28.96% id in 366 aa; mobilization protein 1866396 2883905 ECA1609 Pectobacterium atrosepticum SCRI1043 mobilization protein YP_049709.1 1864495 R 218491 CDS YP_049710.1 50120543 2883906 complement(1866854..1867036) 1 NC_004547.2 no significant database matches; hypothetical protein 1867036 2883906 ECA1610 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049710.1 1866854 R 218491 CDS YP_049711.1 50120544 2883907 complement(1867160..1867465) 1 NC_004547.2 no significant database matches; hypothetical protein 1867465 2883907 ECA1611 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049711.1 1867160 R 218491 CDS YP_049712.1 50120545 2883970 complement(1867481..1867786) 1 NC_004547.2 Similar to Escherichia coli, and Salmonella typhimurium pkm101 conjugation proteins KikA SWALL:Q46691 (EMBL:U09868) (104 aa) fasta scores: E(): 5.5e-16, 49.47% id in 95 aa; plasmid conjugation protein 1867786 kikA 2883970 kikA Pectobacterium atrosepticum SCRI1043 plasmid conjugation protein YP_049712.1 1867481 R 218491 CDS YP_049713.1 50120546 2882696 complement(1867875..1868891) 1 NC_004547.2 Similar to Escherichia coli Virb11 protein VirB11 SWALL:Q91UW6 (EMBL:AJ297913) (355 aa) fasta scores: E(): 1e-37, 38.06% id in 331 aa, and to Actinobacillus actinomycetemcomitans transport associated protein 9 tag9 SWALL:Q9AGG6 (EMBL:AF332996) (340 aa) fasta scores: E(): 7.1e-48, 46.01% id in 326 aa; conjugal transfer protein 1868891 virB11 2882696 virB11 Pectobacterium atrosepticum SCRI1043 conjugal transfer protein YP_049713.1 1867875 R 218491 CDS YP_049714.1 50120547 2882706 complement(1868881..1870200) 1 NC_004547.2 Similar to Escherichia coli Virb10 protein VirB10 SWALL:Q91UW7 (EMBL:AJ297913) (383 aa) fasta scores: E(): 1.2e-23, 32.41% id in 401 aa; conjugal transfer protein 1870200 virB10 2882706 virB10 Pectobacterium atrosepticum SCRI1043 conjugal transfer protein YP_049714.1 1868881 R 218491 CDS YP_049715.1 50120548 2882693 complement(1870197..1871090) 1 NC_004547.2 Similar to Escherichia coli VirB9 protein VirB9 SWALL:Q91UW8 (EMBL:AJ297913) (290 aa) fasta scores: E(): 2.5e-15, 32.52% id in 289 aa; conjugal transfer protein 1871090 virB9 2882693 virB9 Pectobacterium atrosepticum SCRI1043 conjugal transfer protein YP_049715.1 1870197 R 218491 CDS YP_049716.1 50120549 2882692 complement(1871087..1871770) 1 NC_004547.2 Similar to Escherichia coli VirB8 protein VirB8 SWALL:Q91UW9 (EMBL:AJ297913) (236 aa) fasta scores: E(): 2.8e-14, 29.46% id in 224 aa; conjugal transfer protein 1871770 virB8 2882692 virB8 Pectobacterium atrosepticum SCRI1043 conjugal transfer protein YP_049716.1 1871087 R 218491 CDS YP_049717.1 50120550 2882691 complement(1871763..1871903) 1 NC_004547.2 Similar to Escherichia coli VirB7 protein VirB7 SWALL:Q91UX0 (EMBL:AJ297913) (54 aa) fasta scores: E(): 0.7, 40% id in 40 aa; conjugal transfer protein 1871903 virB7 2882691 virB7 Pectobacterium atrosepticum SCRI1043 conjugal transfer protein YP_049717.1 1871763 R 218491 CDS YP_049718.1 50120551 2882690 complement(1871989..1873029) 1 NC_004547.2 Similar to Escherichia coli VirB6 protein VirB6 SWALL:Q91UX1 (EMBL:AJ297913) (360 aa) fasta scores: E(): 9e-06, 21.12% id in 355 aa; conjugal transfer protein 1873029 virB6 2882690 virB6 Pectobacterium atrosepticum SCRI1043 conjugal transfer protein YP_049718.1 1871989 R 218491 CDS YP_049719.1 50120552 2883856 complement(1873103..1873378) 1 NC_004547.2 Similar to Yersinia pestis Orf4 SWALL:Q9RPN3 (EMBL:AF152923) (90 aa) fasta scores: E(): 4.9e-05, 40.29% id in 67 aa, and to Escherichia coli Eex protein SWALL:Q9EUF6 (EMBL:AJ006342) (86 aa) fasta scores: E(): 0.0002, 30.38% id in 79 aa; plasmid protein 1873378 2883856 ECA1618 Pectobacterium atrosepticum SCRI1043 plasmid protein YP_049719.1 1873103 R 218491 CDS YP_049720.1 50120553 2882689 complement(1873390..1874118) 1 NC_004547.2 Similar to Escherichia coli VirB5 protein VirB5 SWALL:Q91UX3 (EMBL:AJ297913) (239 aa) fasta scores: E(): 0.00064, 22.88% id in 236 aa; conjugal transfer protein 1874118 virB5 2882689 virB5 Pectobacterium atrosepticum SCRI1043 conjugal transfer protein YP_049720.1 1873390 R 218491 CDS YP_049721.1 50120554 2882698 complement(1874142..1876889) 1 NC_004547.2 Similar to Escherichia coli VirB4 protein VirB4 SWALL:Q91UX4 (EMBL:AJ297913) (826 aa) fasta scores: E(): 2.4e-90, 34.71% id in 818 aa; conjugal transfer protein 1876889 virB4 2882698 virB4 Pectobacterium atrosepticum SCRI1043 conjugal transfer protein YP_049721.1 1874142 R 218491 CDS YP_049722.1 50120555 2882697 complement(1876901..1877179) 1 NC_004547.2 Similar to Escherichia coli VirB2 protein VirB2 SWALL:Q91UX6 (EMBL:AJ297913) (102 aa) fasta scores: E(): 0.0022, 30.66% id in 75 aa; conjugal transfer protein 1877179 virB2 2882697 virB2 Pectobacterium atrosepticum SCRI1043 conjugal transfer protein YP_049722.1 1876901 R 218491 CDS YP_049723.1 50120556 2882705 complement(1877179..1877826) 1 NC_004547.2 Similar to Escherichia coli VirB1 protein VirB1 SWALL:Q91UX8 (EMBL:AJ297913) (253 aa) fasta scores: E(): 1.1e-12, 32.27% id in 220 aa; conjugal transfer protein 1877826 virB1 2882705 virB1 Pectobacterium atrosepticum SCRI1043 conjugal transfer protein YP_049723.1 1877179 R 218491 CDS YP_049724.1 50120557 2883857 complement(1877904..1878182) 1 NC_004547.2 no significant database matches; hypothetical protein 1878182 2883857 ECA1623 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049724.1 1877904 R 218491 CDS YP_049725.1 50120558 2883858 1878819..1880114 1 NC_004547.2 no significant database matches; hypothetical protein 1880114 2883858 ECA1624 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049725.1 1878819 D 218491 CDS YP_049726.1 50120559 2884256 complement(1880218..1880427) 1 NC_004547.2 Similar to Escherichia coli TraR protein TraR SWALL:TRAR_ECOLI (SWALL:P41065) (73 aa) fasta scores: E(): 1e-06, 41.66% id in 72 aa; conjugal transfer protein 1880427 traR 2884256 traR Pectobacterium atrosepticum SCRI1043 conjugal transfer protein YP_049726.1 1880218 R 218491 CDS YP_049727.1 50120560 2883770 complement(1880417..1881001) 1 NC_004547.2 Similar to Yersinia pestis orf 77 ypo1902 or y2407 SWALL:AAM85965 (EMBL:AL031866) (193 aa) fasta scores: E(): 2.3e-46, 62.17% id in 193 aa, and to Yersinia pseudotuberculosis hypothetical 18.9 kDa protein SWALL:Q9X9G3 (EMBL:AJ236887) (166 aa) fasta scores: E(): 1.6e-38, 62.04% id in 166 aa; hypothetical protein 1881001 2883770 ECA1626 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049727.1 1880417 R 218491 CDS YP_049728.1 50120561 2884195 complement(1881018..1881212) 1 NC_004547.2 Similar to Escherichia coli prophage cp4-57 regulatory protein AlpA or Alp or b2624 SWALL:ALPA_ECOLI (SWALL:P33997) (70 aa) fasta scores: E(): 0.00017, 37.28% id in 59 aa, and to Yersinia pseudotuberculosis DNA-binding protein SWALL:Q9X9G5 (EMBL:AJ236887) (61 aa) fasta scores: E(): 4.7e-21, 86.88% id in 61 aa; prophage regulatory protein 1881212 alpA 2884195 alpA Pectobacterium atrosepticum SCRI1043 prophage regulatory protein YP_049728.1 1881018 R 218491 CDS YP_049729.1 50120562 2883771 complement(1881482..1882006) 1 NC_004547.2 Similar to Yersinia pestis orf 74 SWALL:Q9R7V2 (EMBL:AL031866) (168 aa) fasta scores: E(): 2.1e-05, 36.14% id in 83 aa, and to Yersinia pseudotuberculosis hypothetical 35.5 kDa protein SWALL:Q9X9G6 (EMBL:AJ236887) (308 aa) fasta scores: E(): 5.4e-14, 39% id in 141 aa; hypothetical protein 1882006 2883771 ECA1628 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049729.1 1881482 R 218491 CDS YP_049730.1 50120563 2883772 1883005..1883862 1 NC_004547.2 Similar to Pseudomonas putida PobR protein SWALL:Q9R9T2 (EMBL:AJ251792) (292 aa) fasta scores: E(): 1.4e-12, 29.16% id in 240 aa, and to Xanthomonas campestris transcriptional regulator xcc3932 SWALL:Q8P3Y5 (EMBL:AE012514) (317 aa) fasta scores: E(): 2.4e-17, 36.59% id in 276 aa; AraC family transcriptional regulator 1883862 2883772 ECA1629 Pectobacterium atrosepticum SCRI1043 AraC family transcriptional regulator YP_049730.1 1883005 D 218491 CDS YP_049731.1 50120564 2883672 1886845..1888533 1 NC_004547.2 no significant database matches; hypothetical protein 1888533 2883672 ECA1632 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049731.1 1886845 D 218491 CDS YP_049732.1 50120565 2883673 1888810..1889685 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c2416 SWALL:AAN80875 (EMBL:AE016762) (297 aa) fasta scores: E(): 4.4e-35, 38.65% id in 282 aa; hypothetical protein 1889685 2883673 ECA1633 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049732.1 1888810 D 218491 CDS YP_049733.1 50120566 2883642 1890004..1890399 1 NC_004547.2 Weakly similar to Pyrococcus horikoshii hypothetical protein Ph1126 ph1126 SWALL:O58853 (EMBL:AP000005) (207 aa) fasta scores: E(): 4.7, 31.53% id in 111 aa; hypothetical protein 1890399 2883642 ECA1634 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049733.1 1890004 D 218491 CDS YP_049734.1 50120567 2883643 1890477..1890773 1 NC_004547.2 no significant database matches; hypothetical protein 1890773 2883643 ECA1635 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049734.1 1890477 D 218491 CDS YP_049735.1 50120568 2883644 1890823..1891059 1 NC_004547.2 no significant database matches; hypothetical protein 1891059 2883644 ECA1636 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049735.1 1890823 D 218491 CDS YP_049736.1 50120569 2883592 1891086..1891436 1 NC_004547.2 no significant database matches; hypothetical protein 1891436 2883592 ECA1637 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049736.1 1891086 D 218491 CDS YP_049737.1 50120570 2883593 1891505..1891747 1 NC_004547.2 Similar to Erwinia chrysanthemi Hns regulatory protein hnS SWALL:O53007 (EMBL:X89444) (135 aa) fasta scores: E(): 0.039, 33.75% id in 80 aa, and to Escherichia coli O6 hypothetical protein c2413 SWALL:Q8FGG4 (EMBL:AE016762) (80 aa) fasta scores: E(): 3.3e-18, 75.64% id in 78 aa; Hns-like DNA-binding protein 1891747 2883593 ECA1638 Pectobacterium atrosepticum SCRI1043 Hns-like DNA-binding protein YP_049737.1 1891505 D 218491 CDS YP_049738.1 50120571 2883594 1891965..1893239 1 NC_004547.2 no significant database matches; hypothetical protein 1893239 2883594 ECA1639 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049738.1 1891965 D 218491 CDS YP_049739.1 50120572 2883595 complement(1893333..1893812) 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c2410 SWALL:AAN80869 (EMBL:AE016762) (159 aa) fasta scores: E(): 4.3e-31, 63.52% id in 159 aa; hypothetical protein 1893812 2883595 ECA1640 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049739.1 1893333 R 218491 CDS YP_049740.1 50120573 2883415 1893900..1894037 1 NC_004547.2 no significant database matches; hypothetical protein 1894037 2883415 ECA1641 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049740.1 1893900 D 218491 CDS YP_049741.1 50120574 2883416 1894272..1894526 1 NC_004547.2 no significant database matches; hypothetical protein 1894526 2883416 ECA1642 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049741.1 1894272 D 218491 CDS YP_049742.1 50120575 2883417 complement(1894837..1895358) 1 NC_004547.2 no significant database matches; hypothetical protein 1895358 2883417 ECA1643 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049742.1 1894837 R 218491 CDS YP_049743.1 50120576 2883370 complement(1895384..1896118) 1 NC_004547.2 no significant database matches; DNA-binding protein 1896118 2883370 ECA1644 Pectobacterium atrosepticum SCRI1043 DNA-binding protein YP_049743.1 1895384 R 218491 CDS YP_049744.1 50120577 2883371 1897721..1898485 1 NC_004547.2 Similar to Zymomonas mobilis 20.9 kDa protein SWALL:21KD_ZYMMO (SWALL:P15256) (184 aa) fasta scores: E(): 1.9e-11, 31.97% id in 172 aa, and to Pseudoalteromonas sp. PS1M3 replication protein Rep SWALL:Q9LCJ6 (EMBL:AB022096) (193 aa) fasta scores: E(): 7.1e-11, 32.95% id in 176 aa; hypothetical protein 1898485 2883371 ECA1645 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049744.1 1897721 D 218491 CDS YP_049745.1 50120578 2883372 complement(1898492..1899034) 1 NC_004547.2 Similar to Escherichia coli O157:H7 hypothetical protein z5954 or ecs5314 SWALL:Q8XB64 (EMBL:AE005667) (180 aa) fasta scores: E(): 9.5e-40, 55% id in 180 aa; hypothetical protein 1899034 2883372 ECA1646 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049745.1 1898492 R 218491 CDS YP_049746.1 50120579 2883350 1899338..1900024 1 NC_004547.2 no significant database matches; hypothetical protein 1900024 2883350 ECA1647 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049746.1 1899338 D 218491 CDS YP_049747.1 50120580 2883351 1900098..1900667 1 NC_004547.2 no significant database matches; hypothetical protein 1900667 2883351 ECA1648 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049747.1 1900098 D 218491 CDS YP_049748.1 50120581 2883352 1900959..1901330 1 NC_004547.2 no significant database matches; hypothetical protein 1901330 2883352 ECA1649 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049748.1 1900959 D 218491 CDS YP_049749.1 50120582 2883319 1901396..1901848 1 NC_004547.2 no significant database matches; hypothetical protein 1901848 2883319 ECA1650 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049749.1 1901396 D 218491 CDS YP_049750.1 50120583 2883320 complement(1901913..1902167) 1 NC_004547.2 no significant database matches; hypothetical protein 1902167 2883320 ECA1651 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049750.1 1901913 R 218491 CDS YP_049751.1 50120584 2883321 complement(1902248..1903087) 1 NC_004547.2 Similar to Yersinia enterocolitica IS1400 transposase B Trp1400B SWALL:Q9X9H9 (EMBL:AJ132945) (294 aa) fasta scores: E(): 1.2e-64, 61.83% id in 262 aa, and to Desulfovibrio vulgaris transposase orfb SWALL:O31218 (EMBL:AF034211) (310 aa) fasta scores: E(): 1.3e-64, 59.61% id in 260 aa; transposase 1903087 2883321 ECA1652 Pectobacterium atrosepticum SCRI1043 transposase YP_049751.1 1902248 R 218491 CDS YP_049752.1 50120585 2883261 complement(1903090..1903356) 1 NC_004547.2 Similar to Escherichia coli O6 transposase c2472 SWALL:AAN80931 (EMBL:AE016762) (88 aa) fasta scores: E(): 2e-22, 72.72% id in 88 aa, and to Yersinia pestis, and Yersinia pseudotuberculosis low calcium response locus protein S LcrS or ypcd1.63 or y5015 or y0018 SWALL:LCRS_YERPE (SWALL:Q00931) (88 aa) fasta scores: E(): 1.7e-29, 96.59% id in 88 aa; transposase 1903356 2883261 ECA1653 Pectobacterium atrosepticum SCRI1043 transposase YP_049752.1 1903090 R 218491 CDS YP_049753.1 50120586 2883262 complement(1903582..1903959) 1 NC_004547.2 Similar to Escherichia coli O157:H7 z3937 protein z3937 or ecs3506 SWALL:Q8X978 (EMBL:AE005493) (131 aa) fasta scores: E(): 4.5e-17, 44.82% id in 116 aa; hypothetical protein 1903959 2883262 ECA1654 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049753.1 1903582 R 218491 CDS YP_049754.1 50120587 2883263 1904592..1905143 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c2401 SWALL:AAN80860 (EMBL:AE016762) (191 aa) fasta scores: E(): 1.8e-35, 55.97% id in 184 aa; lipoprotein 1905143 2883263 ECA1655 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_049754.1 1904592 D 218491 CDS YP_049755.1 50120588 2883264 1905154..1905429 1 NC_004547.2 no significant database matches; hypothetical protein 1905429 2883264 ECA1656 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049755.1 1905154 D 218491 CDS YP_049756.1 50120589 2883191 complement(1905551..1907395) 1 NC_004547.2 no significant database matches; hypothetical protein 1907395 2883191 ECA1657 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049756.1 1905551 R 218491 CDS YP_049757.1 50120590 2883192 1908104..1909087 1 NC_004547.2 no significant database matches; hypothetical protein 1909087 2883192 ECA1658 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049757.1 1908104 D 218491 CDS YP_049758.1 50120591 2883193 complement(1909271..1910731) 1 NC_004547.2 Similar to Lactococcus lactis nicking enzyme SWALL:O87207 (EMBL:AE001272) (680 aa) fasta scores: E(): 2.9e-20, 33.77% id in 302 aa, and to Escherichia coli O6 hypothetical protein c2397 SWALL:AAN80856 (EMBL:AE016762) (500 aa) fasta scores: E(): 2.9e-119, 64.98% id in 477 aa, and to Thiobacillus ferrooxidans mobilization protein MobL mobL SWALL:MOBL_THIFE (SWALL:P20085) (378 aa) fasta scores: E(): 3.7e-09, 28.23% id in 294 aa; plasmid-like protein 1910731 2883193 ECA1659 Pectobacterium atrosepticum SCRI1043 plasmid-like protein YP_049758.1 1909271 R 218491 CDS YP_049759.1 50120592 2883117 1911408..1912160 1 NC_004547.2 no significant database matches; hypothetical protein 1912160 2883117 ECA1660 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049759.1 1911408 D 218491 CDS YP_049760.1 50120593 2883118 1912380..1913045 1 NC_004547.2 no significant database matches; hypothetical protein 1913045 2883118 ECA1661 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049760.1 1912380 D 218491 CDS YP_049761.1 50120594 2883119 1913612..1913905 1 NC_004547.2 no significant database matches; hypothetical protein 1913905 2883119 ECA1662 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049761.1 1913612 D 218491 CDS YP_049762.1 50120595 2883092 1913934..1914218 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c2396 SWALL:AAN80855 (EMBL:AE016762) (104 aa) fasta scores: E(): 6.6e-10, 47.87% id in 94 aa; hypothetical protein 1914218 2883092 ECA1663 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049762.1 1913934 D 218491 CDS YP_049763.1 50120596 2883093 complement(1914324..1914683) 1 NC_004547.2 no significant database matches; lipoprotein 1914683 2883093 ECA1664 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_049763.1 1914324 R 218491 CDS YP_049764.1 50120597 2881905 complement(1914763..1915161) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 DNA-binding protein H-NS SWALL:HNS_ECOLI (SWALL:P08936) (136 aa) fasta scores: E(): 3.4e-22, 61.19% id in 134 aa, and to Erwinia chrysanthemi Hns regulatory protein hnS SWALL:O53007 (EMBL:X89444) (135 aa) fasta scores: E(): 1.5e-22, 61.65% id in 133 aa. Also similar to ECA2893 (87.970% id in 133 aa overlap) and to ECA2328 (61.654% id in 133 aa overlap); DNA-binding protein Hns 1915161 hns1 2881905 hns1 Pectobacterium atrosepticum SCRI1043 DNA-binding protein Hns YP_049764.1 1914763 R 218491 CDS YP_049765.1 50120598 2883094 1915262..1915492 1 NC_004547.2 no significant database matches; hypothetical protein 1915492 2883094 ECA1666 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049765.1 1915262 D 218491 CDS YP_049766.1 50120599 2883082 1915724..1916281 1 NC_004547.2 Similar to Escherichia coli O6 type IV pilin protein precursor c2395 SWALL:Q8CVY4 (EMBL:AE016762) (185 aa) fasta scores: E(): 5e-33, 52.68% id in 186 aa; type IV pilin protein 1916281 2883082 ECA1667 Pectobacterium atrosepticum SCRI1043 type IV pilin protein YP_049766.1 1915724 D 218491 CDS YP_049767.1 50120600 2883083 1916388..1917980 1 NC_004547.2 Similar to Escherichia coli O6 PilV-like protein c2394 SWALL:AAN80853 (EMBL:AE016762) (487 aa) fasta scores: E(): 4.2e-75, 52.14% id in 443 aa, and to Salmonella typhimurium type IV prepilin pilV SWALL:BAB91683 (EMBL:AP005147) (474 aa) fasta scores: E(): 2e-06, 26.94% id in 464 aa; type IV prepilin 1917980 2883083 ECA1668 Pectobacterium atrosepticum SCRI1043 type IV prepilin YP_049767.1 1916388 D 218491 CDS YP_049768.1 50120601 2883084 1918143..1919885 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo0873 or y3255 SWALL:Q8ZHL8 (EMBL:AJ414145) (512 aa) fasta scores: E(): 4.6e-50, 42.01% id in 545 aa; hypothetical protein 1919885 2883084 ECA1669 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049768.1 1918143 D 218491 CDS YP_049769.1 50120602 2883061 1919882..1920076 1 NC_004547.2 Similar to Neisseria meningitidis hypothetical protein Nma0318 SWALL:Q9JWL2 (EMBL:AL162752) (68 aa) fasta scores: E(): 0.00015, 42.59% id in 54 aa, and to Clostridium perfringens hypothetical protein Cpe0646 SWALL:Q8XMP2 (EMBL:AP003187) (51 aa) fasta scores: E(): 4.2, 28.84% id in 52 aa; hypothetical protein 1920076 2883061 ECA1669A Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049769.1 1919882 D 218491 CDS YP_049770.1 50120603 2883062 complement(1920492..1920980) 1 NC_004547.2 Similar to the C-terminal region of Bifidobacterium longum probable sugar permease of abc transporter system Bl1332 SWALL:AAN25132 (EMBL:UNKNOWN ACCESSION) (285 aa) fasta scores: E(): 2, 25.88% id in 170 aa; hypothetical protein 1920980 2883062 ECA1670 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049770.1 1920492 R 218491 CDS YP_049771.1 50120604 2883063 complement(1921648..1921920) 1 NC_004547.2 Similar to Yersinia pestis hypothetical y3270 SWALL:AAM86820 (EMBL:AE013928) (93 aa) fasta scores: E(): 1.2e-10, 46.57% id in 73 aa; hypothetical protein 1921920 2883063 ECA1671 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049771.1 1921648 R 218491 CDS YP_049772.1 50120605 2883064 complement(1922529..1922717) 1 NC_004547.2 no significant database matches; hypothetical protein 1922717 2883064 ECA1672 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049772.1 1922529 R 218491 CDS YP_049773.1 50120606 2884153 complement(1922743..1922949) 1 NC_004547.2 no significant database matches; hypothetical protein 1922949 2884153 ECA1672A Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049773.1 1922743 R 218491 CDS YP_049774.1 50120607 2884154 complement(1923048..>1923206) 1 NC_004547.2 Partial CDS. Similar to the C-terminal regions of many phage integrases including Escherichia coli prophage P4 integrase IntB or b4271 SWALL:INTB_ECOLI (SWALL:P39347) (396 aa) fasta scores: E(): 3.6e-13, 70.21% id in 47 aa; integrase (partial) >1923206 2884154 ECA1673 Pectobacterium atrosepticum SCRI1043 integrase (partial) YP_049774.1 1923048 R 218491 CDS YP_049775.1 50120608 2884155 complement(1923212..1923496) 1 NC_004547.2 Similar to Pyrococcus furiosus hypothetical protein Pf0664 SWALL:Q8U312 (EMBL:AE010187) (102 aa) fasta scores: E(): 2.1e-05, 31.81% id in 88 aa; hypothetical protein 1923496 2884155 ECA1674 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049775.1 1923212 R 218491 CDS YP_049776.1 50120609 2885662 complement(1923640..>1923981) 1 NC_004547.2 Partial CDS. Similar to the C-terminal regions of several phage integrases including Escherichia coli O6 P4-family integrase c2392 SWALL:AAN80851 (EMBL:AE016762) (406 aa) fasta scores: E(): 7.5e-08, 52.85% id in 70 aa, and to Xanthomonas axonopodis phage-related integrase IntA or xac1664 SWALL:Q8PLX5 (EMBL:AE011798) (396 aa) fasta scores: E(): 0.0014, 59.09% id in 44 aa; integrase (partial) >1923981 2885662 ECA1675 Pectobacterium atrosepticum SCRI1043 integrase (partial) YP_049776.1 1923640 R 218491 CDS YP_049777.1 50120610 2884681 complement(1923957..1924289) 1 NC_004547.2 MazF; endoribonuclease; toxin of the ChpA-ChpR toxin-antitoxin system; toxin ChpA 1924289 chpA 2884681 chpA Pectobacterium atrosepticum SCRI1043 toxin ChpA YP_049777.1 1923957 R 218491 CDS YP_049778.1 50120611 2884682 complement(1924289..1924540) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 PemI-like protein 1 ChpR or MazE or ChpaI or b2783 or z4098 or ecs3643 SWALL:CHPR_ECOLI (SWALL:P18534) (82 aa) fasta scores: E(): 4.6e-09, 38.55% id in 83 aa, and to Bacillus halodurans suppressor of ppgpp-regulated growth inhibitor bh3720 SWALL:Q9K6K9 (EMBL:AP001519) (81 aa) fasta scores: E(): 6.1e-05, 38.75% id in 80 aa; suppressor of growth inhibitory protein ChpA 1924540 chpR 2884682 chpR Pectobacterium atrosepticum SCRI1043 suppressor of growth inhibitory protein ChpA YP_049778.1 1924289 R 218491 CDS YP_049779.1 50120612 2885663 complement(1925154..1925486) 1 NC_004547.2 no significant database matches; hypothetical protein 1925486 2885663 ECA1678 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049779.1 1925154 R 218491 CDS YP_049780.1 50120613 2881280 complement(1925682..1926959) 1 NC_004547.2 Similar to Yersinia pestis integrase IntB or ypo3438 SWALL:Q8ZBH6 (EMBL:AJ414157) (419 aa) fasta scores: E(): 2.4e-97, 58.15% id in 423 aa, and to Shigella flexneri integrase IntB or sf4224 SWALL:AAN45643 (EMBL:AE015430) (415 aa) fasta scores: E(): 2.4e-90, 58.45% id in 402 aa; phage integrase 1926959 intB 2881280 intB Pectobacterium atrosepticum SCRI1043 phage integrase YP_049780.1 1925682 R 218491 CDS YP_049781.1 50120614 2885664 complement(1927325..1928122) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1732 or y2576 SWALL:Q8ZFH7 (EMBL:AJ414150) (270 aa) fasta scores: E(): 5.5e-74, 65.64% id in 262 aa, and to Escherichia coli hypothetical protein yeei or b1976 SWALL:YEEI_ECOLI (SWALL:P76346) (265 aa) fasta scores: E(): 1.8e-67, 61.88% id in 265 aa; hypothetical protein 1928122 2885664 ECA1680 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049781.1 1927325 R 218491 CDS YP_049782.1 50120615 2885657 complement(1928679..1930007) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein yddv or b1490 or z2219 or ecs2095 SWALL:YDDV_ECOLI (SWALL:P77793) (460 aa) fasta scores: E(): 3.2e-64, 42.62% id in 427 aa, and to Shigella flexneri orf, conserved hypothetical protein yddv or sf1736.1 SWALL:AAN43312 (EMBL:AE015194) (381 aa) fasta scores: E(): 7.6e-44, 40.85% id in 328 aa; hypothetical protein 1930007 2885657 ECA1681 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049782.1 1928679 R 218491 CDS YP_049783.1 50120616 2885429 1930301..1930504 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 DsrB protein dsrb or b1952 or c2370 or z3042 or ecs2691 SWALL:DSRB_ECOLI (SWALL:P40678) (62 aa) fasta scores: E(): 3.3e-15, 72.88% id in 59 aa; hypothetical protein 1930504 dsrB 2885429 dsrB Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049783.1 1930301 D 218491 CDS YP_049784.1 50120617 2884252 complement(1930573..1932294) 1 NC_004547.2 Similar to Escherichia coli methyl-accepting chemotaxis protein III Trg or b1421 SWALL:MCP3_ECOLI (SWALL:P05704) (546 aa) fasta scores: E(): 5.4e-99, 59.96% id in 537 aa; methyl-accepting chemotaxis protein 1932294 trg 2884252 trg Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_049784.1 1930573 R 218491 CDS YP_049785.1 50120618 2885658 1932575..1933540 1 NC_004547.2 Similar to Salmonella typhimurium permease yifz or stm4395 SWALL:Q8ZK79 (EMBL:AE008906) (308 aa) fasta scores: E(): 5.9e-80, 69.79% id in 298 aa, and to Salmonella typhi membrane protein sty4751 SWALL:Q8Z162 (EMBL:AL627283) (308 aa) fasta scores: E(): 1.1e-79, 69.46% id in 298 aa; hypothetical protein 1933540 2885658 ECA1684 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049785.1 1932575 D 218491 CDS YP_049786.1 50120619 2881944 1934361..1934720 1 NC_004547.2 with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; transcriptional activator FlhD 1934720 flhD 2881944 flhD Pectobacterium atrosepticum SCRI1043 transcriptional activator FlhD YP_049786.1 1934361 D 218491 CDS YP_049787.1 50120620 2881913 1934724..1935302 1 NC_004547.2 With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; transcriptional activator FlhC 1935302 flhC 2881913 flhC Pectobacterium atrosepticum SCRI1043 transcriptional activator FlhC YP_049787.1 1934724 D 218491 CDS YP_049788.1 50120621 2881753 1935437..1936324 1 NC_004547.2 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 1936324 motA 2881753 motA Pectobacterium atrosepticum SCRI1043 flagellar motor protein MotA YP_049788.1 1935437 D 218491 CDS YP_049789.1 50120622 2881754 1936321..1937376 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 chemotaxis MotB protein MotB or b1889 or z2943 or ecs2599 SWALL:MOTB_ECOLI (SWALL:P09349) (308 aa) fasta scores: E(): 1.1e-64, 64.51% id in 310 aa; flagellar motor protein 1937376 motB 2881754 motB Pectobacterium atrosepticum SCRI1043 flagellar motor protein YP_049789.1 1936321 D 218491 CDS YP_049790.1 50120623 2884598 1937404..1939404 1 NC_004547.2 chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY; sensory histidine kinase/signal sensing protein; CheA is the histidine kinase component; chemotaxis protein CheA 1939404 cheA 2884598 cheA Pectobacterium atrosepticum SCRI1043 chemotaxis protein CheA YP_049790.1 1937404 D 218491 CDS YP_049791.1 50120624 2884549 1939436..1939933 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri chemotaxis protein CheW or b1887 or c2302 or z2941 or ecs2597 or sf1936 SWALL:CHEW_ECOLI (SWALL:P07365) (167 aa) fasta scores: E(): 3.6e-50, 86.33% id in 161 aa; purine-binding chemotaxis protein 1939933 cheW 2884549 cheW Pectobacterium atrosepticum SCRI1043 purine-binding chemotaxis protein YP_049791.1 1939436 D 218491 CDS YP_049792.1 50120625 2884600 1940069..1941754 1 NC_004547.2 Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 1.3e-112, 63.81% id in 561 aa; methyl-accepting chemotaxis protein 1941754 cheD 2884600 cheD Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_049792.1 1940069 D 218491 CDS YP_049793.1 50120626 2884601 1942291..1943163 1 NC_004547.2 methylates the MCP; chemotaxis methyltransferase CheR 1943163 cheR 2884601 cheR Pectobacterium atrosepticum SCRI1043 chemotaxis methyltransferase CheR YP_049793.1 1942291 D 218491 CDS YP_049794.1 50120627 2884599 1943163..1944215 1 NC_004547.2 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; chemotaxis-specific methylesterase 1944215 cheB 2884599 cheB Pectobacterium atrosepticum SCRI1043 chemotaxis-specific methylesterase YP_049794.1 1943163 D 218491 CDS YP_049795.1 50120628 2884550 1944254..1944643 1 NC_004547.2 chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble; chemotaxis regulatory protein CheY 1944643 cheY 2884550 cheY Pectobacterium atrosepticum SCRI1043 chemotaxis regulatory protein CheY YP_049795.1 1944254 D 218491 CDS YP_049796.1 50120629 2884551 1944653..1945297 1 NC_004547.2 cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; chemotaxis regulator CheZ 1945297 cheZ 2884551 cheZ Pectobacterium atrosepticum SCRI1043 chemotaxis regulator CheZ YP_049796.1 1944653 D 218491 CDS YP_049797.1 50120630 2881912 1945543..1946694 1 NC_004547.2 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 1946694 flhB 2881912 flhB Pectobacterium atrosepticum SCRI1043 flagellar biosynthesis protein FlhB YP_049797.1 1945543 D 218491 CDS YP_049798.1 50120631 2881911 1946687..1948771 1 NC_004547.2 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 1948771 flhA 2881911 flhA Pectobacterium atrosepticum SCRI1043 flagellar biosynthesis protein FlhA YP_049798.1 1946687 D 218491 CDS YP_049799.1 50120632 2881945 1948768..1949187 1 NC_004547.2 Similar to Escherichia coli flagellar protein FlhE precursor FlhE or b1878 SWALL:FLHE_ECOLI (SWALL:P76297) (130 aa) fasta scores: E(): 1.2e-12, 38.68% id in 137 aa; flagellar protein 1949187 flhE 2881945 flhE Pectobacterium atrosepticum SCRI1043 flagellar protein YP_049799.1 1948768 D 218491 CDS YP_049800.1 50120633 2881910 complement(1949261..1949698) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi flagella synthesis protein FlgN or stm1171 or sty1210 SWALL:FLGN_SALTY (SWALL:P37406) (140 aa) fasta scores: E(): 2.4e-14, 38.88% id in 144 aa, and to Yersinia enterocolitica flagella synthesis protein FlgN SWALL:FLGN_YEREN (SWALL:Q56854) (147 aa) fasta scores: E(): 6.2e-22, 46.85% id in 143 aa; flagella synthesis protein 1949698 flgN 2881910 flgN Pectobacterium atrosepticum SCRI1043 flagella synthesis protein YP_049800.1 1949261 R 218491 CDS YP_049801.1 50120634 2881909 complement(1949704..1950000) 1 NC_004547.2 regulates the flagellar specific sigma28 transcription factor; anti-sigma-28 factor FlgM 1950000 flgM 2881909 flgM Pectobacterium atrosepticum SCRI1043 anti-sigma-28 factor FlgM YP_049801.1 1949704 R 218491 CDS YP_049802.1 50120635 2881343 complement(1950142..1950810) 1 NC_004547.2 required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 1950810 flgA 2881343 flgA Pectobacterium atrosepticum SCRI1043 flagellar basal body P-ring biosynthesis protein FlgA YP_049802.1 1950142 R 218491 CDS YP_049803.1 50120636 2881344 1950974..1951390 1 NC_004547.2 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal-body rod protein FlgB 1951390 flgB 2881344 flgB Pectobacterium atrosepticum SCRI1043 flagellar basal-body rod protein FlgB YP_049803.1 1950974 D 218491 CDS YP_049804.1 50120637 2881345 1951419..1951823 1 NC_004547.2 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 1951823 flgC 2881345 flgC Pectobacterium atrosepticum SCRI1043 flagellar basal body rod protein FlgC YP_049804.1 1951419 D 218491 CDS YP_049805.1 50120638 2885432 1951839..1952513 1 NC_004547.2 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; flagellar basal body rod modification protein 1952513 flgD 2885432 flgD Pectobacterium atrosepticum SCRI1043 flagellar basal body rod modification protein YP_049805.1 1951839 D 218491 CDS YP_049806.1 50120639 2885433 1952589..1953806 1 NC_004547.2 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 1953806 flgE 2885433 flgE Pectobacterium atrosepticum SCRI1043 flagellar hook protein FlgE YP_049806.1 1952589 D 218491 CDS YP_049807.1 50120640 2885434 1953828..1954583 1 NC_004547.2 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgF 1954583 flgF 2885434 flgF Pectobacterium atrosepticum SCRI1043 flagellar basal body rod protein FlgF YP_049807.1 1953828 D 218491 CDS YP_049808.1 50120641 2881850 1954611..1955393 1 NC_004547.2 makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 1955393 flgG 2881850 flgG Pectobacterium atrosepticum SCRI1043 flagellar basal body rod protein FlgG YP_049808.1 1954611 D 218491 CDS YP_049809.1 50120642 2881851 1955568..1956287 1 NC_004547.2 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 1956287 flgH 2881851 flgH Pectobacterium atrosepticum SCRI1043 flagellar basal body L-ring protein YP_049809.1 1955568 D 218491 CDS YP_049810.1 50120643 2881352 1956304..1957413 1 NC_004547.2 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 1957413 flgI 2881352 flgI Pectobacterium atrosepticum SCRI1043 flagellar basal body P-ring protein YP_049810.1 1956304 D 218491 CDS YP_049811.1 50120644 2881353 1957413..1958375 1 NC_004547.2 Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; flagellar rod assembly protein/muramidase FlgJ 1958375 flgJ 2881353 flgJ Pectobacterium atrosepticum SCRI1043 flagellar rod assembly protein/muramidase FlgJ YP_049811.1 1957413 D 218491 CDS YP_049812.1 50120645 2881354 1958502..1960208 1 NC_004547.2 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 1960208 flgK 2881354 flgK Pectobacterium atrosepticum SCRI1043 flagellar hook-associated protein FlgK YP_049812.1 1958502 D 218491 CDS YP_049813.1 50120646 2881908 1960240..1961193 1 NC_004547.2 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes; flagellar hook-associated protein FlgL 1961193 flgL 2881908 flgL Pectobacterium atrosepticum SCRI1043 flagellar hook-associated protein FlgL YP_049813.1 1960240 D 218491 CDS YP_049814.1 50120647 2881940 complement(1961529..1962314) 1 NC_004547.2 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 1962314 fliR 2881940 fliR Pectobacterium atrosepticum SCRI1043 flagellar biosynthesis protein FliR YP_049814.1 1961529 R 218491 CDS YP_049815.1 50120648 2881939 complement(1962317..1962586) 1 NC_004547.2 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 1962586 fliQ 2881939 fliQ Pectobacterium atrosepticum SCRI1043 flagellar biosynthesis protein FliQ YP_049815.1 1962317 R 218491 CDS YP_049816.1 50120649 2881938 complement(1962607..1963383) 1 NC_004547.2 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 1963383 fliP 2881938 fliP Pectobacterium atrosepticum SCRI1043 flagellar biosynthesis protein FliP YP_049816.1 1962607 R 218491 CDS YP_049817.1 50120650 2881234 complement(1963380..1963802) 1 NC_004547.2 Previously sequenced as Erwinia carotovora MopB protein mopB SWALL:MOPB_ERWCA (SWALL:P34199) (140 aa) fasta scores: E(): 2.5e-48, 95% id in 140 aa, and to Salmonella typhimurium, and Salmonella typhi flagellar protein flio flio or flbd or flap or stm1978 or sty2186 SWALL:FLIO_SALTY (SWALL:P54699) (125 aa) fasta scores: E(): 2.9e-14, 45% id in 120 aa; flagellar protein 1963802 fliO 2881234 fliO Pectobacterium atrosepticum SCRI1043 flagellar protein YP_049817.1 1963380 R 218491 CDS YP_049818.1 50120651 2881233 complement(1963802..1964215) 1 NC_004547.2 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein FliN 1964215 fliN 2881233 fliN Pectobacterium atrosepticum SCRI1043 flagellar motor switch protein FliN YP_049818.1 1963802 R 218491 CDS YP_049819.1 50120652 2882159 complement(1964208..1965221) 1 NC_004547.2 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 1965221 fliM 2882159 fliM Pectobacterium atrosepticum SCRI1043 flagellar motor switch protein FliM YP_049819.1 1964208 R 218491 CDS YP_049820.1 50120653 2882158 complement(1965227..1965712) 1 NC_004547.2 interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 1965712 fliL 2882158 fliL Pectobacterium atrosepticum SCRI1043 flagellar basal body-associated protein FliL YP_049820.1 1965227 R 218491 CDS YP_049821.1 50120654 2882157 complement(1965862..1967160) 1 NC_004547.2 Similar to Salmonella typhimurium flagellar hook-length control protein FliK or FlaE or FlaR or stm1974 SWALL:FLIK_SALTY (SWALL:P26416) (405 aa) fasta scores: E(): 1.9e-22, 35.3% id in 405 aa; flagellar hook-length control protein 1967160 fliK 2882157 fliK Pectobacterium atrosepticum SCRI1043 flagellar hook-length control protein YP_049821.1 1965862 R 218491 CDS YP_049822.1 50120655 2882111 complement(1967157..1967603) 1 NC_004547.2 rod/hook and filament chaperone; flagellar biosynthesis chaperone 1967603 fliJ 2882111 fliJ Pectobacterium atrosepticum SCRI1043 flagellar biosynthesis chaperone YP_049822.1 1967157 R 218491 CDS YP_049823.1 50120656 2882110 complement(1967612..1968985) 1 NC_004547.2 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 1968985 fliI 2882110 fliI Pectobacterium atrosepticum SCRI1043 flagellum-specific ATP synthase YP_049823.1 1967612 R 218491 CDS YP_049824.1 50120657 2882080 complement(1968982..1969704) 1 NC_004547.2 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 1969704 fliH 2882080 fliH Pectobacterium atrosepticum SCRI1043 flagellar assembly protein H YP_049824.1 1968982 R 218491 CDS YP_049825.1 50120658 2882079 complement(1969697..1970689) 1 NC_004547.2 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 1970689 fliG 2882079 fliG Pectobacterium atrosepticum SCRI1043 flagellar motor switch protein G YP_049825.1 1969697 R 218491 CDS YP_049826.1 50120659 2882078 complement(1970686..1972410) 1 NC_004547.2 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 1972410 fliF 2882078 fliF Pectobacterium atrosepticum SCRI1043 flagellar MS-ring protein YP_049826.1 1970686 R 218491 CDS YP_049827.1 50120660 2882064 1972671..1972985 1 NC_004547.2 forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 1972985 fliE 2882064 fliE Pectobacterium atrosepticum SCRI1043 flagellar hook-basal body protein FliE YP_049827.1 1972671 D 218491 CDS YP_049828.1 50120661 2882050 complement(1973235..1973615) 1 NC_004547.2 binds flagellar cap subunits (FliD) and seems to prevents their oligomerization prior to its translocation through the flagellum-specific type III export pathway; acts as a repressor of flagellar class 2 operons by preventing FlhD2C2 to bind the promoter and inhibiting the FlhD2C2-dependent transcription; member of the type III cytoplasmic chaperone family; flagellar biosynthesis protein FliT 1973615 fliT 2882050 fliT Pectobacterium atrosepticum SCRI1043 flagellar biosynthesis protein FliT YP_049828.1 1973235 R 218491 CDS YP_049829.1 50120662 2882049 complement(1973615..1974025) 1 NC_004547.2 flagellin specific chaperone; flagellar protein FliS 1974025 fliS 2882049 fliS Pectobacterium atrosepticum SCRI1043 flagellar protein FliS YP_049829.1 1973615 R 218491 CDS YP_049830.1 50120663 2882063 complement(1974065..1975483) 1 NC_004547.2 involved in flagellin assembly; flagellar capping protein 1975483 fliD 2882063 fliD Pectobacterium atrosepticum SCRI1043 flagellar capping protein YP_049830.1 1974065 R 218491 CDS YP_049831.1 50120664 2882062 1975728..1976600 1 NC_004547.2 Similar to Erwinia chrysanthemi flagellin FliC SWALL:Q8RST5 (EMBL:AJ430202) (280 aa) fasta scores: E(): 3.2e-36, 65.29% id in 291 aa, and to Pseudomonas fluorescens flagellin FliC SWALL:Q8VS56 (EMBL:AF399739) (283 aa) fasta scores: E(): 3.4e-39, 50.85% id in 291 aa; flagellin 1976600 fliC 2882062 fliC Pectobacterium atrosepticum SCRI1043 flagellin YP_049831.1 1975728 D 218491 CDS YP_049832.1 50120665 2885659 1976824..1980243 1 NC_004547.2 no significant database matches; hypothetical protein 1980243 2885659 ECA1732 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049832.1 1976824 D 218491 CDS YP_049833.1 50120666 2882704 1980555..1981667 1 NC_004547.2 Similar to Escherichia coli VioA SWALL:Q9XCW4 (EMBL:AF125322) (371 aa) fasta scores: E(): 1e-78, 59.94% id in 362 aa, and to Xanthomonas axonopodis nucleotide sugar transaminase VioA or xac1966 SWALL:Q8PL40 (EMBL:AE011831) (369 aa) fasta scores: E(): 9.2e-87, 61.43% id in 363 aa; nucleotide sugar transaminase 1981667 vioA 2882704 vioA Pectobacterium atrosepticum SCRI1043 nucleotide sugar transaminase YP_049833.1 1980555 D 218491 CDS YP_049834.1 50120667 2885533 1981773..1982474 1 NC_004547.2 Similar to Shewanella oneidensis conserved hypothetical protein so3184 SWALL:AAN56184 (EMBL:AE015756) (240 aa) fasta scores: E(): 5e-24, 34.34% id in 230 aa, and to Bordetella bronchiseptica hypothetical 27.4 kDa protein bblps1.06 SWALL:O87979 (EMBL:AJ007747) (239 aa) fasta scores: E(): 6.7e-15, 31.03% id in 232 aa; hypothetical protein 1982474 2885533 ECA1734 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049834.1 1981773 D 218491 CDS YP_049835.1 50120668 2885534 1982477..1983436 1 NC_004547.2 Similar to Xanthomonas axonopodis hypothetical protein Xac1689 SWALL:Q8PLV0 (EMBL:AE011801) (317 aa) fasta scores: E(): 2.3e-21, 29.74% id in 316 aa, and to Mycobacterium tuberculosis hypothetical protein rv1502 or mt1551 or mtcy277.24 SWALL:YF02_MYCTU (SWALL:P71783) (299 aa) fasta scores: E(): 1.6e-12, 34.82% id in 313 aa; hypothetical protein 1983436 2885534 ECA1735 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049835.1 1982477 D 218491 CDS YP_049836.1 50120669 2885535 1983436..1984404 1 NC_004547.2 Similar to Xanthomonas axonopodis hypothetical protein Xac1689 SWALL:Q8PLV0 (EMBL:AE011801) (317 aa) fasta scores: E(): 3.7e-11, 31.67% id in 322 aa, and to Mycobacterium tuberculosis hypothetical protein rv1502 or mt1551 or mtcy277.24 SWALL:YF02_MYCTU (SWALL:P71783) (299 aa) fasta scores: E(): 0.0028, 31.56% id in 320 aa; hypothetical protein 1984404 2885535 ECA1736 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049836.1 1983436 D 218491 CDS YP_049837.1 50120670 2882822 1984404..1984844 1 NC_004547.2 Similar to Lactococcus lactis acetyltransferase ycjc or ll0293 SWALL:Q9CIR3 (EMBL:AE006266) (189 aa) fasta scores: E(): 0.0034, 32.46% id in 77 aa, and to Haemophilus influenzae ribosomal-protein-alanine acetyltransferase rimi or hi0010 SWALL:RIMI_HAEIN (SWALL:P44305) (146 aa) fasta scores: E(): 0.053, 27.55% id in 127 aa; acetyltransferase 1984844 2882822 ECA1737 Pectobacterium atrosepticum SCRI1043 acetyltransferase YP_049837.1 1984404 D 218491 CDS YP_049838.1 50120671 2882823 1984841..1985590 1 NC_004547.2 Similar to Synechocystis sp. hypothetical protein Slr1618 SWALL:P72896 (EMBL:D90901) (261 aa) fasta scores: E(): 5e-13, 26.69% id in 236 aa; hypothetical protein 1985590 2882823 ECA1738 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049838.1 1984841 D 218491 CDS YP_049839.1 50120672 2881946 1986118..1986840 1 NC_004547.2 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 1986840 fliA 2881946 fliA Pectobacterium atrosepticum SCRI1043 flagellar biosynthesis sigma factor YP_049839.1 1986118 D 218491 CDS YP_049840.1 50120673 2882051 1987044..1987559 1 NC_004547.2 expression activator of the class 2 type of flagellar operons, essential to achieve maximal cell motility; activator of type 1 fimbrial gene expression; cell density-responsive regulator; FliZ in Salmonella typhimurium induces HilA, an activator of invasion genes necessary to achieve full virulence; flagella biosynthesis protein FliZ 1987559 fliZ 2882051 fliZ Pectobacterium atrosepticum SCRI1043 flagella biosynthesis protein FliZ YP_049840.1 1987044 D 218491 CDS YP_049841.1 50120674 2883716 1988090..1988878 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 phoh protein PhoH or PsiH or b1020 or z1522 or ecs1266 SWALL:PHOH_ECOLI (SWALL:P31544) (354 aa) fasta scores: E(): 1.1e-85, 86.97% id in 261 aa; hypothetical protein 1988878 phoH 2883716 phoH Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049841.1 1988090 D 218491 CDS YP_049842.1 50120675 2882824 complement(1989440..1990078) 1 NC_004547.2 Similar to Streptococcus agalactiae hypothetical protein gbs1892 SWALL:CAD47551 (EMBL:AL766854) (212 aa) fasta scores: E(): 1.6e-50, 62.08% id in 211 aa, and to Clostridium acetobutylicum predicted sugar-phosphate isomerase cac2606 SWALL:Q97FX0 (EMBL:AE007758) (213 aa) fasta scores: E(): 4.8e-56, 68.24% id in 211 aa; hypothetical protein 1990078 2882824 ECA1742 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049842.1 1989440 R 218491 CDS YP_049843.1 50120676 2881644 complement(1990295..1992328) 1 NC_004547.2 proton-motive-force-driven choline transporter; choline transport protein BetT 1992328 betT 2881644 betT Pectobacterium atrosepticum SCRI1043 choline transport protein BetT YP_049843.1 1990295 R 218491 CDS YP_049844.1 50120677 2881643 1992686..1993273 1 NC_004547.2 HTH-type; bet1; Repressor involved in choline regulation of the bet genes; transcriptional regulator BetI 1993273 betI 2881643 betI Pectobacterium atrosepticum SCRI1043 transcriptional regulator BetI YP_049844.1 1992686 D 218491 CDS YP_049845.1 50120678 2882566 1993342..1994814 1 NC_004547.2 catalyzes the formation of betaine from betaine aldehyde; betaine aldehyde dehydrogenase 1994814 betB 2882566 betB Pectobacterium atrosepticum SCRI1043 betaine aldehyde dehydrogenase YP_049845.1 1993342 D 218491 CDS YP_049846.1 50120679 2882565 1994834..1996513 1 NC_004547.2 catalyzes the oxidation of choline to betaine aldehyde and betain aldehyde to glycine betaine; choline dehydrogenase 1996513 betA 2882565 betA Pectobacterium atrosepticum SCRI1043 choline dehydrogenase YP_049846.1 1994834 D 218491 CDS YP_049847.1 50120680 2882825 1996673..1997326 1 NC_004547.2 Similar to Escherichia coli O157:H7 orf, hypothetical protein yebe or z2897 or ecs2556 SWALL:Q8XCK2 (EMBL:AE005407) (219 aa) fasta scores: E(): 5e-42, 57% id in 214 aa, and to Shigella flexneri orf, conserved hypothetical protein yebe or sf1857 SWALL:AAN43415 (EMBL:AE015204) (219 aa) fasta scores: E(): 3.1e-41, 56.07% id in 214 aa; hypothetical protein 1997326 2882825 ECA1747 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049847.1 1996673 D 218491 CDS YP_049848.1 50120681 2884026 complement(1997423..1997941) 1 NC_004547.2 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; 3-hydroxydecanoyl-ACP dehydratase 1997941 fabA 2884026 fabA Pectobacterium atrosepticum SCRI1043 3-hydroxydecanoyl-ACP dehydratase YP_049848.1 1997423 R 218491 CDS YP_049849.1 50120682 2882760 complement(1998033..1999760) 1 NC_004547.2 Similar to Escherichia coli protease La homolog ycbz or b0955 SWALL:LONH_ECOLI (SWALL:P75867) (586 aa) fasta scores: E(): 3e-130, 54.75% id in 579 aa, and to Yersinia pestis lon protease ypo1431 or y2739 SWALL:Q8ZG79 (EMBL:AJ414148) (590 aa) fasta scores: E(): 4.3e-167, 67.47% id in 575 aa; hypothetical protein 1999760 2882760 ECA1749 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049849.1 1998033 R 218491 CDS YP_049850.1 50120683 2882761 1999980..2000438 1 NC_004547.2 Similar to Salmonella typhimurium cytoplasmic protein ycbg or stm1069 SWALL:Q8ZQ68 (EMBL:AE008746) (150 aa) fasta scores: E(): 2.9e-43, 79.19% id in 149 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein ycbg or b0956 or z1306 or ecs1040 SWALL:YCBG_ECOLI (SWALL:P45569) (150 aa) fasta scores: E(): 2.6e-42, 78% id in 150 aa; hypothetical protein 2000438 2882761 ECA1750 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049850.1 1999980 D 218491 CDS YP_049851.1 50120684 2883407 complement(2000516..2001616) 1 NC_004547.2 OmpA is believed to be a porin, involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli, and it is known to play a role as a phage receptor, a mediator of F-factor dependent conjugation, and in maintaining the structural shape of the outer membrane; 3a; II*; G; d; outer membrane protein A 2001616 ompA 2883407 ompA Pectobacterium atrosepticum SCRI1043 outer membrane protein A YP_049851.1 2000516 R 218491 CDS YP_049852.1 50120685 2884331 complement(2001980..2002486) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 cell division inhibitor SulA or SfiA or b0958 or z1308 or ecs1042 SWALL:SULA_ECOLI (SWALL:P08846) (169 aa) fasta scores: E(): 2.3e-31, 57.83% id in 166 aa; SOS cell division inhibitor 2002486 sulA 2884331 sulA Pectobacterium atrosepticum SCRI1043 SOS cell division inhibitor YP_049852.1 2001980 R 218491 CDS YP_049853.1 50120686 2882762 2002710..2003330 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo1437 SWALL:Q8ZG75 (EMBL:AJ414148) (211 aa) fasta scores: E(): 7.1e-38, 53.36% id in 208 aa, and to Escherichia coli hypothetical protein yccr or b0959 SWALL:YCCR_ECOLI (SWALL:P75869) (209 aa) fasta scores: E(): 9.7e-27, 42.78% id in 194 aa; hypothetical protein 2003330 2882762 ECA1753 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049853.1 2002710 D 218491 CDS YP_049854.1 50120687 2882783 complement(2003347..2005482) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo1438 or y2732 SWALL:AAM86284 (EMBL:AJ414148) (712 aa) fasta scores: E(): 0, 75.03% id in 709 aa, and to Shigella flexneri orf, conserved hypothetical protein yccs or sf0962 SWALL:AAN42590 (EMBL:AE015125) (721 aa) fasta scores: E(): 5.4e-206, 71% id in 707 aa; hypothetical protein 2005482 2882783 ECA1754 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049854.1 2003347 R 218491 CDS YP_049855.1 50120688 2882784 complement(2005503..2005949) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi inner membrane protein yccf or stm1074 or sty1096 SWALL:Q8XGG4 (EMBL:AE008746) (148 aa) fasta scores: E(): 8.5e-52, 82.99% id in 147 aa, and to Escherichia coli, and Shigella flexneri hypothetical protein yccf or b0961 or sf0963 SWALL:YCCF_ECOLI (SWALL:P37065) (148 aa) fasta scores: E(): 1.4e-51, 83.67% id in 147 aa; hypothetical protein 2005949 2882784 ECA1755 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049855.1 2005503 R 218491 CDS YP_049856.1 50120689 2883060 2006148..2008205 1 NC_004547.2 catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand; DNA helicase IV 2008205 helD 2883060 helD Pectobacterium atrosepticum SCRI1043 DNA helicase IV YP_049856.1 2006148 D 218491 CDS YP_049857.1 50120690 2883339 complement(2008288..2008746) 1 NC_004547.2 catalyzes the formation of methylglyoxal from glycerone phosphate; methylglyoxal synthase 2008746 mgsA 2883339 mgsA Pectobacterium atrosepticum SCRI1043 methylglyoxal synthase YP_049857.1 2008288 R 218491 CDS YP_049858.1 50120691 2882785 complement(2008884..2009408) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein ycct precursor ycct or b0964 or c1101 or z1315 or ecs1048 or sf0966 SWALL:YCCT_ECOLI (SWALL:P75873) (220 aa) fasta scores: E(): 1.1e-16, 35.63% id in 174 aa, and to Yersinia pestis exported protein ypo1442 or y2728 SWALL:AAM86280 (EMBL:AJ414148) (226 aa) fasta scores: E(): 2.6e-16, 42.85% id in 168 aa; hypothetical protein 2009408 2882785 ECA1758 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049858.1 2008884 R 218491 CDS YP_049859.1 50120692 2882392 2009604..2010017 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1443 or y2727 SWALL:AAM86279 (EMBL:AJ414148) (138 aa) fasta scores: E(): 1.5e-35, 75.18% id in 137 aa, and to Salmonella typhimurium, and Salmonella typhi cytoplasmic protein stm1078 or sty1101 SWALL:Q8XGM9 (EMBL:AE008747) (138 aa) fasta scores: E(): 1.8e-34, 72.99% id in 137 aa; CoA binding protein 2010017 2882392 ECA1759 Pectobacterium atrosepticum SCRI1043 CoA binding protein YP_049859.1 2009604 D 218491 CDS YP_049860.1 50120693 2882393 complement(2010099..2010407) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi inner membrane protein yccv or stm1079 or sty1102 SWALL:Q8XFC1 (EMBL:AE008747) (105 aa) fasta scores: E(): 1.5e-22, 59.04% id in 105 aa, and to Yersinia pestis hypothetical protein ypo1444 or y2726 SWALL:AAM86278 (EMBL:AJ414148) (113 aa) fasta scores: E(): 1e-21, 60% id in 105 aa; heat shock protein HspQ 2010407 2882393 ECA1760 Pectobacterium atrosepticum SCRI1043 heat shock protein HspQ YP_049860.1 2010099 R 218491 CDS YP_049861.1 50120694 2882394 2010635..2010913 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 acylphosphatase yccx or b0968 or z1320 or ecs1052 SWALL:ACYP_ECOLI (SWALL:P75877) (92 aa) fasta scores: E(): 4.4e-18, 61.95% id in 92 aa; acylphosphatase 2010913 2882394 ECA1761 Pectobacterium atrosepticum SCRI1043 acylphosphatase YP_049861.1 2010635 D 218491 CDS YP_049862.1 50120695 2882225 complement(2010925..2011254) 1 NC_004547.2 Similar to Yersinia pestis sulfite reductase y2723 SWALL:AAM86275 (EMBL:AE013875) (109 aa) fasta scores: E(): 1.1e-38, 92.66% id in 109 aa, and to Escherichia coli, and Shigella flexneri hypothetical protein ycck ycck or b0969 or sf0971 SWALL:YCCK_ECOLI (SWALL:P45572) (109 aa) fasta scores: E(): 1.6e-32, 78.89% id in 109 aa; hypothetical protein 2011254 2882225 ECA1762 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049862.1 2010925 R 218491 CDS YP_049863.1 50120696 2882226 complement(2011395..2012054) 1 NC_004547.2 Similar to Salmonella typhi membrane protein sty1112 SWALL:Q8Z7R5 (EMBL:AL627269) (219 aa) fasta scores: E(): 2.3e-60, 77.16% id in 219 aa, and to Escherichia coli O157:H7 carrier/transport protein ycca or z1322 or ecs1054 SWALL:Q8XD81 (EMBL:AE005287) (219 aa) fasta scores: E(): 4e-60, 76.25% id in 219 aa; hypothetical protein 2012054 2882226 ECA1763 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049863.1 2011395 R 218491 CDS YP_049864.1 50120697 2882227 complement(2012812..2013066) 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty1854 SWALL:Q8Z6D3 (EMBL:AL627271) (82 aa) fasta scores: E(): 0.0033, 40% id in 60 aa, and to Salmonella typhimurium cytoplasmic protein stm1267 SWALL:Q8ZPX7 (EMBL:AE008755) (82 aa) fasta scores: E(): 0.0024, 40% id in 60 aa; hypothetical protein 2013066 2882227 ECA1764 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049864.1 2012812 R 218491 CDS YP_049865.1 50120698 2882661 complement(2013100..2013261) 1 NC_004547.2 no significant database matches; hypothetical protein 2013261 2882661 ECA1765 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049865.1 2013100 R 218491 CDS YP_049866.1 50120699 2882662 2013548..2013970 1 NC_004547.2 Similar to Anabaena sp. hypothetical protein Alr2015 SWALL:Q8YVG3 (EMBL:AP003587) (143 aa) fasta scores: E(): 3.7e-15, 38.93% id in 131 aa, and to Bradyrhizobium japonicum Blr7631 protein blr7631 SWALL:BAC52896 (EMBL:AP005962) (172 aa) fasta scores: E(): 3.2e-13, 43.26% id in 141 aa; hypothetical protein 2013970 2882662 ECA1766 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049866.1 2013548 D 218491 CDS YP_049867.1 50120700 2882663 2013994..2014578 1 NC_004547.2 Similar to Lactococcus lactis hypothetical protein yvea or ll2054 SWALL:Q9CDZ6 (EMBL:AE006436) (176 aa) fasta scores: E(): 5.4e-12, 33.53% id in 167 aa, and to Clostridium acetobutylicum amidase from nicotinamidase family cac3465 SWALL:Q97DL0 (EMBL:AE007844) (178 aa) fasta scores: E(): 1.5e-09, 30.23% id in 172 aa; isochorismatase family protein 2014578 2882663 ECA1767 Pectobacterium atrosepticum SCRI1043 isochorismatase family protein YP_049867.1 2013994 D 218491 CDS YP_049868.1 50120701 2882664 2014583..2015038 1 NC_004547.2 Similar to Bacteroides thetaiotaomicron acetyltransferase, bt1464 SWALL:AAO76571 (EMBL:AE016931) (152 aa) fasta scores: E(): 3.3e-31, 50.68% id in 146 aa, and to Lactococcus lactis unknown protein yuid or ll2008 SWALL:Q9CE40 (EMBL:AE006430) (152 aa) fasta scores: E(): 6.2e-31, 50.34% id in 147 aa; acetyltransferase 2015038 2882664 ECA1768 Pectobacterium atrosepticum SCRI1043 acetyltransferase YP_049868.1 2014583 D 218491 CDS YP_049869.1 50120702 2885453 2015203..2015631 1 NC_004547.2 Similar to Escherichia coli unknown protein from 2d-page ybdq or b0607 SWALL:UP12_ECOLI (SWALL:P39177) (142 aa) fasta scores: E(): 4e-19, 46.52% id in 144 aa, and to Shigella flexneri orf, conserved hypothetical protein ybdq or sf0526 SWALL:AAN42172 (EMBL:AE015084) (142 aa) fasta scores: E(): 4.6e-19, 46.52% id in 144 aa; hypothetical protein 2015631 2885453 ECA1769 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049869.1 2015203 D 218491 CDS YP_049870.1 50120703 2885454 complement(2015680..2016186) 1 NC_004547.2 Similar to Rhizobium meliloti hypothetical protein r00856 or smc00850 SWALL:Q92RL1 (EMBL:AL591785) (172 aa) fasta scores: E(): 9.4e-29, 51.28% id in 156 aa, and to Pseudomonas putida conserved hypothetical protein pp5158 SWALL:AAN70723 (EMBL:AE016793) (167 aa) fasta scores: E(): 5.6e-23, 43.7% id in 151 aa; hypothetical protein 2016186 2885454 ECA1770 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049870.1 2015680 R 218491 CDS YP_049871.1 50120704 2885455 complement(2016270..2016455) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein yjdo or b4128.1 or c5136 or z5731 or ecs5110.1 SWALL:YJDO_ECOLI (SWALL:P58038) (57 aa) fasta scores: E(): 1.8e-05, 42.3% id in 52 aa, and to Shigella flexneri orf, conserved hypothetical protein ydcx or sf1772 SWALL:AAN43343 (EMBL:AE015197) (82 aa) fasta scores: E(): 3e-06, 40% id in 60 aa; hypothetical protein 2016455 2885455 ECA1771 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049871.1 2016270 R 218491 CDS YP_049872.1 50120705 2881457 2016611..2016910 1 NC_004547.2 Similar to Escherichia coli O157:H7 hypothetical protein z2994 or ecs2649 SWALL:Q8XBD8 (EMBL:AE005414) (130 aa) fasta scores: E(): 2.9e-14, 53.19% id in 94 aa; hypothetical protein 2016910 2881457 ECA1772 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049872.1 2016611 D 218491 CDS YP_049873.1 50120706 2881458 2017069..2017350 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2226 or y2068 SWALL:AAM85632 (EMBL:AJ414151) (100 aa) fasta scores: E(): 1.5e-11, 54% id in 100 aa; hypothetical protein 2017350 2881458 ECA1773 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049873.1 2017069 D 218491 CDS YP_049874.1 50120707 2881459 2018184..2019848 1 NC_004547.2 Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 9.1e-53, 40.82% id in 556 aa; methyl-accepting chemotaxis protein 2019848 2881459 ECA1774 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_049874.1 2018184 D 218491 CDS YP_049875.1 50120708 2881872 complement(2019963..2021483) 1 NC_004547.2 Similar to Corynebacterium glutamicum uncharacterized iron-regulated membrane protein cgl2326 SWALL:Q8NN80 (EMBL:AP005281) (475 aa) fasta scores: E(): 3.2e-31, 36.8% id in 451 aa, and to Streptomyces coelicolor integral membrane protein sco0863 or scm2.16C SWALL:Q9RCU8 (EMBL:AL939107) (485 aa) fasta scores: E(): 1.6e-21, 39.44% id in 464 aa; iron-regulated membrane protein 2021483 2881872 ECA1775 Pectobacterium atrosepticum SCRI1043 iron-regulated membrane protein YP_049875.1 2019963 R 218491 CDS YP_049876.1 50120709 2881873 complement(2021583..2022077) 1 NC_004547.2 no significant database matches; hypothetical protein 2022077 2881873 ECA1776 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049876.1 2021583 R 218491 CDS YP_049877.1 50120710 2883317 2022455..2024023 1 NC_004547.2 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; glucan biosynthesis protein G 2024023 mdoG 2883317 mdoG Pectobacterium atrosepticum SCRI1043 glucan biosynthesis protein G YP_049877.1 2022455 D 218491 CDS YP_049878.1 50120711 2883318 2024016..2026580 1 NC_004547.2 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; glucosyltransferase MdoH 2026580 opgH 2883318 opgH Pectobacterium atrosepticum SCRI1043 glucosyltransferase MdoH YP_049878.1 2024016 D 218491 CDS YP_049879.1 50120712 2883723 complement(2026698..2027618) 1 NC_004547.2 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis lauroyl acyltransferase 2027618 htrB 2883723 htrB Pectobacterium atrosepticum SCRI1043 lipid A biosynthesis lauroyl acyltransferase YP_049879.1 2026698 R 218491 CDS YP_049880.1 50120713 2881874 complement(2027880..2028974) 1 NC_004547.2 Similar to Xanthomonas axonopodis fmn oxidoreductase frp or xac0321 SWALL:Q8PQK2 (EMBL:AE011657) (365 aa) fasta scores: E(): 1.4e-86, 62.53% id in 363 aa, and to Ralstonia solanacearum NADH-dependent flavin oxidoreductase protein rsc0702 or rs01607 SWALL:Q8Y1I8 (EMBL:AL646060) (370 aa) fasta scores: E(): 1.8e-79, 56.63% id in 362 aa; NADH-dependent flavin oxidoreductase 2028974 2881874 ECA1780 Pectobacterium atrosepticum SCRI1043 NADH-dependent flavin oxidoreductase YP_049880.1 2027880 R 218491 CDS YP_049881.1 50120714 2882059 2029109..2030257 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2451/y1738 ypo2451 or y1738 SWALL:AAM85306 (EMBL:AJ414152) (373 aa) fasta scores: E(): 7.5e-115, 79.5% id in 366 aa, and to Salmonella typhimurium hypothetical protein ycea ycea or stm1156 SWALL:YCEA_SALTY (SWALL:Q8ZQ23) (350 aa) fasta scores: E(): 1e-101, 74.21% id in 349 aa; hypothetical protein 2030257 2882059 ECA1781 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049881.1 2029109 D 218491 CDS YP_049882.1 50120715 2882060 complement(2030332..2030910) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi secreted protein ycei or stm1157 or sty1194 SWALL:Q8XGU0 (EMBL:AE008750) (191 aa) fasta scores: E(): 1.1e-61, 82.19% id in 191 aa, and to Shigella flexneri orf, conserved hypothetical protein ycei or sf1063 SWALL:AAN42685 (EMBL:AE015134) (191 aa) fasta scores: E(): 1.1e-60, 80.1% id in 191 aa; hypothetical protein 2030910 2882060 ECA1782 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049882.1 2030332 R 218491 CDS YP_049883.1 50120716 2882061 complement(2030937..2031491) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo2316 SWALL:Q8ZE67 (EMBL:AJ414152) (184 aa) fasta scores: E(): 3.6e-53, 69.94% id in 183 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0422 SWALL:Q9I691 (EMBL:AE004479) (189 aa) fasta scores: E(): 8.1e-48, 62.63% id in 182 aa; hypothetical protein 2031491 2882061 ECA1783 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049883.1 2030937 R 218491 CDS YP_049884.1 50120717 2881569 complement(2031947..2032201) 1 NC_004547.2 BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing; biofilm formation regulatory protein BssS 2032201 bssS 2881569 bssS Pectobacterium atrosepticum SCRI1043 biofilm formation regulatory protein BssS YP_049884.1 2031947 R 218491 CDS YP_049885.1 50120718 2881570 complement(2032438..2032695) 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c1435 SWALL:AAN79904 (EMBL:AE016759) (92 aa) fasta scores: E(): 0.5, 30.38% id in 79 aa; hypothetical protein 2032695 2881570 ECA1785 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049885.1 2032438 R 218491 CDS YP_049886.1 50120719 2883356 complement(2032784..2033023) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri DNA-damage-inducible protein I DinI or b1061 or c1328 or z1698 or ecs1439 or sf1067 SWALL:DINI_ECOLI (SWALL:Q47143) (81 aa) fasta scores: E(): 6.5e-18, 64.19% id in 81 aa; DNA damage-inducible protein I 2033023 dinI 2883356 dinI Pectobacterium atrosepticum SCRI1043 DNA damage-inducible protein I YP_049886.1 2032784 R 218491 CDS YP_049887.1 50120720 2882669 complement(2033130..2034173) 1 NC_004547.2 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 2034173 pyrC 2882669 pyrC Pectobacterium atrosepticum SCRI1043 dihydroorotase YP_049887.1 2033130 R 218491 CDS YP_049888.1 50120721 2881571 2034358..2034645 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1588 or y1744 SWALL:AAM85313 (EMBL:AJ414149) (95 aa) fasta scores: E(): 1.1e-15, 51.68% id in 89 aa, and to Neisseria meningitidis hypothetical protein Nma1764 SWALL:Q9JTI2 (EMBL:AL162757) (97 aa) fasta scores: E(): 1.4e-12, 43.33% id in 90 aa; hypothetical protein 2034645 2881571 ECA1788 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049888.1 2034358 D 218491 CDS YP_049889.1 50120722 2885043 complement(2034716..2038000) 1 NC_004547.2 bifunctional ribonuclease E/endoribonuclease/RNA-binding protein/RNA degradosome binding protein; forms part of the membrane-associated degradosome complex along with PNPase, RhlB, and enolase; ribonuclease E 2038000 rne 2885043 rne Pectobacterium atrosepticum SCRI1043 ribonuclease E YP_049889.1 2034716 R 218491 CDS YP_049890.1 50120723 2885049 2038594..2039550 1 NC_004547.2 catalyzes the transformation of uracil to pseudouracil at nucleotides U955, U2504, and U2580 in 23S rRNA; 23S rRNA pseudouridylate synthase C 2039550 rluC 2885049 rluC Pectobacterium atrosepticum SCRI1043 23S rRNA pseudouridylate synthase C YP_049890.1 2038594 D 218491 CDS YP_049891.1 50120724 2881572 complement(2039605..2040198) 1 NC_004547.2 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 2040198 maf 2881572 maf Pectobacterium atrosepticum SCRI1043 Maf-like protein YP_049891.1 2039605 R 218491 CDS YP_049892.1 50120725 2881364 2040339..2040860 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1594 or y1752 SWALL:Q8ZFU0 (EMBL:AJ414149) (174 aa) fasta scores: E(): 2.8e-56, 85.96% id in 171 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein yced or g30k or b1088 or c1358 or z1727 or ecs1466 SWALL:YCED_ECOLI (SWALL:P14189) (173 aa) fasta scores: E(): 1e-53, 79.76% id in 173 aa; hypothetical protein 2040860 2881364 ECA1792 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049892.1 2040339 D 218491 CDS YP_049893.1 50120726 2884496 2040877..2041047 1 NC_004547.2 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 2041047 rpmF 2884496 rpmF Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L32 YP_049893.1 2040877 D 218491 CDS YP_049894.1 50120727 2883468 2041077..2042123 1 NC_004547.2 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 2042123 plsX 2883468 plsX Pectobacterium atrosepticum SCRI1043 glycerol-3-phosphate acyltransferase PlsX YP_049894.1 2041077 D 218491 CDS YP_049895.1 50120728 2883888 2042130..2043083 1 NC_004547.2 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 2043083 fabH 2883888 fabH Pectobacterium atrosepticum SCRI1043 3-oxoacyl-ACP synthase YP_049895.1 2042130 D 218491 CDS YP_049896.1 50120729 2883912 2043101..2044030 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 malonyl CoA-acyl carrier protein transacylase FabD or TfpA or b1092 or c1361 SWALL:FABD_ECOLI (SWALL:P25715) (308 aa) fasta scores: E(): 1.7e-91, 78.82% id in 307 aa; ACP S-malonyltransferase 2044030 fabD 2883912 fabD Pectobacterium atrosepticum SCRI1043 ACP S-malonyltransferase YP_049896.1 2043101 D 218491 CDS YP_049897.1 50120730 2883887 2044045..2044779 1 NC_004547.2 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 2044779 fabG 2883887 fabG Pectobacterium atrosepticum SCRI1043 3-ketoacyl-ACP reductase YP_049897.1 2044045 D 218491 CDS YP_049898.1 50120731 2884761 2044934..2045170 1 NC_004547.2 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 2045170 acpP 2884761 acpP Pectobacterium atrosepticum SCRI1043 acyl carrier protein YP_049898.1 2044934 D 218491 CDS YP_049899.1 50120732 2883913 2045253..2046494 1 NC_004547.2 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 2046494 fabF 2883913 fabF Pectobacterium atrosepticum SCRI1043 3-oxoacyl-(acyl carrier protein) synthase II YP_049899.1 2045253 D 218491 CDS YP_049900.1 50120733 2881518 2046622..2047419 1 NC_004547.2 catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; 4-amino-4-deoxychorismate lyase 2047419 pabC 2881518 pabC Pectobacterium atrosepticum SCRI1043 4-amino-4-deoxychorismate lyase YP_049900.1 2046622 D 218491 CDS YP_049901.1 50120734 2881365 2047434..2048453 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo1604 SWALL:Q8ZFT1 (EMBL:AJ414149) (341 aa) fasta scores: E(): 8.7e-94, 69.79% id in 341 aa, and to Salmonella typhimurium periplasmic solute-binding protein yceg or stm1199 SWALL:Q8ZQ13 (EMBL:AE008752) (340 aa) fasta scores: E(): 8.3e-79, 62.64% id in 340 aa; aminodeoxychorismate lyase 2048453 2881365 ECA1801 Pectobacterium atrosepticum SCRI1043 aminodeoxychorismate lyase YP_049901.1 2047434 D 218491 CDS YP_049902.1 50120735 2884272 2048443..2049102 1 NC_004547.2 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 2049102 tmk 2884272 tmk Pectobacterium atrosepticum SCRI1043 thymidylate kinase YP_049902.1 2048443 D 218491 CDS YP_049903.1 50120736 2882077 2049102..2050112 1 NC_004547.2 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 2050112 holB 2882077 holB Pectobacterium atrosepticum SCRI1043 DNA polymerase III subunit delta' YP_049903.1 2049102 D 218491 CDS YP_049904.1 50120737 2881366 2050132..2050929 1 NC_004547.2 Similar to Yersinia pestis deoxyribonuclease ypo1607 or y1766 SWALL:Q8ZFT0 (EMBL:AJ414149) (269 aa) fasta scores: E(): 1.2e-81, 75.47% id in 265 aa, and to Salmonella enterica subsp. enterica serovar Typhi Ty2 hypothetical protein T1718 t1718 SWALL:AAO69342 (EMBL:AE016839) (265 aa) fasta scores: E(): 5e-78, 74.14% id in 263 aa; metallodependent hydrolase 2050929 2881366 ECA1804 Pectobacterium atrosepticum SCRI1043 metallodependent hydrolase YP_049904.1 2050132 D 218491 CDS YP_049905.1 50120738 2881864 2051245..2052678 1 NC_004547.2 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system glucose-specific transporter subunits IIBC 2052678 ptsG 2881864 ptsG Pectobacterium atrosepticum SCRI1043 PTS system glucose-specific transporter subunits IIBC YP_049905.1 2051245 D 218491 CDS YP_049906.1 50120739 2881879 2053746..2055224 1 NC_004547.2 Similar to Streptomyces coelicolor probable actinorhodin transporter actii-2 or sco5083 or scbac28g1.09 SWALL:AC22_STRCO (SWALL:P46105) (578 aa) fasta scores: E(): 9e-55, 40.4% id in 443 aa, and to Streptomyces avermitilis transmembrane efflux protein SWALL:Q93HG4 (EMBL:AB070943) (489 aa) fasta scores: E(): 2.2e-68, 46.59% id in 455 aa; transporter 2055224 2881879 ECA1808 Pectobacterium atrosepticum SCRI1043 transporter YP_049906.1 2053746 D 218491 CDS YP_049907.1 50120740 2881880 2055442..2055792 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1611 ypo1611 or y1770 SWALL:Q8ZFS7 (EMBL:AJ414149) (117 aa) fasta scores: E(): 3.7e-38, 86.84% id in 114 aa, and to Salmonella typhimurium, and Salmonella typhi hypothetical protein ycff ycff or stm1205 or sty1245 SWALL:Q8XER7 (EMBL:AE008752) (119 aa) fasta scores: E(): 9.5e-38, 83.47% id in 115 aa; purine nucleoside phosphoramidase 2055792 2881880 ECA1809 Pectobacterium atrosepticum SCRI1043 purine nucleoside phosphoramidase YP_049907.1 2055442 D 218491 CDS YP_049908.1 50120741 2881881 2055833..2056213 1 NC_004547.2 Similar to Yersinia pestis lipoprotein ypo1612 SWALL:Q8ZFS6 (EMBL:AJ414149) (129 aa) fasta scores: E(): 1e-15, 44.53% id in 119 aa, and to Shigella flexneri orf, conserved hypothetical protein ycfl or sf1108 SWALL:AAN42726 (EMBL:AE015138) (125 aa) fasta scores: E(): 1.5e-14, 38.88% id in 126 aa; lipoprotein 2056213 2881881 ECA1810 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_049908.1 2055833 D 218491 CDS YP_049909.1 50120742 2881882 2056235..2056816 1 NC_004547.2 Similar to Yersinia pestis lipoprotein ypo1613 or y1772 SWALL:Q8ZFS5 (EMBL:AJ414149) (191 aa) fasta scores: E(): 2.2e-33, 66.49% id in 194 aa, and to Salmonella typhimurium outer membrane lipoprotein ycfm or stm1207 SWALL:Q8ZQ08 (EMBL:AE008752) (212 aa) fasta scores: E(): 1.7e-24, 52.88% id in 208 aa; lipoprotein 2056816 2881882 ECA1811 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_049909.1 2056235 D 218491 CDS YP_049910.1 50120743 2881883 2056845..2057672 1 NC_004547.2 Similar to Yersinia pestis hypothetical y1773 SWALL:Q8CLA0 (EMBL:AE013780) (295 aa) fasta scores: E(): 8.1e-51, 45.89% id in 268 aa, and to Escherichia coli O157:H7 beta-glucosidase ycfn or z1745 or ecs1484 SWALL:Q8X8G6 (EMBL:AE005320) (274 aa) fasta scores: E(): 1.2e-25, 36.77% id in 242 aa; hypothetical protein 2057672 2881883 ECA1812 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049910.1 2056845 D 218491 CDS YP_049911.1 50120744 2884609 2057749..2058777 1 NC_004547.2 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; beta-hexosaminidase 2058777 nagZ 2884609 nagZ Pectobacterium atrosepticum SCRI1043 beta-hexosaminidase YP_049911.1 2057749 D 218491 CDS YP_049912.1 50120745 2882163 2058806..2059348 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi hypothetical protein ycfp or stm1210 or sty1250 SWALL:Q8XGQ0 (EMBL:AE008752) (180 aa) fasta scores: E(): 8.5e-62, 82.77% id in 180 aa, and to Yersinia pestis hypothetical protein ypo1616 or y1776 SWALL:AAM85344 (EMBL:AJ414149) (180 aa) fasta scores: E(): 3.8e-61, 81.11% id in 180 aa; hypothetical protein 2059348 2882163 ECA1814 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049912.1 2058806 D 218491 CDS YP_049913.1 50120746 2885654 2059718..2061022 1 NC_004547.2 Similar to Escherichia coli NADH dehydrogenase Ndh or b1109 SWALL:DHNA_ECOLI (SWALL:P00393) (433 aa) fasta scores: E(): 8e-134, 80.37% id in 433 aa; NADH dehydrogenase 2061022 ndh 2885654 ndh Pectobacterium atrosepticum SCRI1043 NADH dehydrogenase YP_049913.1 2059718 D 218491 CDS YP_049914.1 50120747 2882164 2061462..2062031 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein y1782 SWALL:AAM85350 (EMBL:AE013781) (188 aa) fasta scores: E(): 6.1e-55, 85.79% id in 183 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri hypothetical protein ycfj ycfj or b1110 or c1383 or sf1114 SWALL:AAN42732 (EMBL:AE000211) (192 aa) fasta scores: E(): 6.9e-52, 81.86% id in 182 aa; hypothetical protein 2062031 2882164 ECA1816 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049914.1 2061462 D 218491 CDS YP_049915.1 50120748 2882165 complement(2062113..2063309) 1 NC_004547.2 Similar to Streptomyces lividans sensor protein homolog SWALL:P72472 (EMBL:U63848) (410 aa) fasta scores: E(): 9.3e-49, 42.78% id in 388 aa, and to Streptomyces coelicolor integral membrane transport protein sco0079 or scj11.08C SWALL:Q9RI96 (EMBL:AL939104) (407 aa) fasta scores: E(): 1.1e-48, 42.78% id in 388 aa; transporter 2063309 2882165 ECA1817 Pectobacterium atrosepticum SCRI1043 transporter YP_049915.1 2062113 R 218491 CDS YP_049916.1 50120749 2885329 complement(2063346..2064554) 1 NC_004547.2 Similar to Pseudomonas putida transporter, pp3961 SWALL:AAN69555 (EMBL:AE016788) (402 aa) fasta scores: E(): 5.9e-107, 75.25% id in 392 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2269 SWALL:Q9I1K4 (EMBL:AE004652) (401 aa) fasta scores: E(): 4.7e-74, 55.75% id in 391 aa; transporter 2064554 2885329 ECA1818 Pectobacterium atrosepticum SCRI1043 transporter YP_049916.1 2063346 R 218491 CDS YP_049917.1 50120750 2885330 2064690..2065280 1 NC_004547.2 Similar to Pseudomonas putida transcriptional regulator, TetR family pp3960 SWALL:AAN69554 (EMBL:AE016788) (201 aa) fasta scores: E(): 1.5e-51, 74.35% id in 195 aa, and to Agrobacterium tumefaciens transcriptional regulator, TetR family atu4317 or agr_l_1093 SWALL:Q8U7Y2 (EMBL:AE009360) (201 aa) fasta scores: E(): 2.3e-29, 50% id in 196 aa; TetR family transcriptional regulator 2065280 2885330 ECA1819 Pectobacterium atrosepticum SCRI1043 TetR family transcriptional regulator YP_049917.1 2064690 D 218491 CDS YP_049918.1 50120751 2885331 complement(2065357..2066727) 1 NC_004547.2 Similar to Salmonella typhimurium heat shock protein yegd or stm2125 SWALL:Q8ZNQ4 (EMBL:AE008794) (450 aa) fasta scores: E(): 1.2e-121, 68.22% id in 450 aa, and to Escherichia coli hypothetical chaperone protein yegd yegd or b2069 SWALL:YEGD_ECOLI (SWALL:P36928) (450 aa) fasta scores: E(): 1.6e-121, 69.33% id in 450 aa; chaperone 2066727 2885331 ECA1820 Pectobacterium atrosepticum SCRI1043 chaperone YP_049918.1 2065357 R 218491 CDS YP_049919.1 50120752 2883338 complement(2066956..2070405) 1 NC_004547.2 Similar to Escherichia coli transcription-repair coupling factor Mfd or b1114 SWALL:MFD_ECOLI (SWALL:P30958) (1148 aa) fasta scores: E(): 0, 83.1% id in 1148 aa; transcription-repair coupling factor 2070405 mfd 2883338 mfd Pectobacterium atrosepticum SCRI1043 transcription-repair coupling factor YP_049919.1 2066956 R 218491 CDS YP_049920.1 50120753 2885582 2070545..2071747 1 NC_004547.2 part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolC 2071747 lolC 2885582 lolC Pectobacterium atrosepticum SCRI1043 outer membrane-specific lipoprotein transporter subunit LolC YP_049920.1 2070545 D 218491 CDS YP_049921.1 50120754 2885567 2071740..2072447 1 NC_004547.2 outer membrane specific; part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone; lipoprotein transporter ATP-binding subunit 2072447 lolD 2885567 lolD Pectobacterium atrosepticum SCRI1043 lipoprotein transporter ATP-binding subunit YP_049921.1 2071740 D 218491 CDS YP_049922.1 50120755 2885568 2072444..2073691 1 NC_004547.2 part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; outer membrane-specific lipoprotein transporter subunit LolE 2073691 lolE 2885568 lolE Pectobacterium atrosepticum SCRI1043 outer membrane-specific lipoprotein transporter subunit LolE YP_049922.1 2072444 D 218491 CDS YP_049923.1 50120756 2885332 2073776..2074690 1 NC_004547.2 Similar to Escherichia coli hypothetical protein ycfx or b1119 SWALL:YCFX_ECOLI (SWALL:P75959) (303 aa) fasta scores: E(): 5.4e-79, 62.37% id in 303 aa, and to Salmonella typhimurium regulator ycfx or stm1220 SWALL:Q8ZPZ9 (EMBL:AE008753) (303 aa) fasta scores: E(): 1.7e-78, 62.37% id in 303 aa; hypothetical protein 2074690 2885332 ECA1826 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049923.1 2073776 D 218491 CDS YP_049924.1 50120757 2884953 2074702..2075532 1 NC_004547.2 Modulates the activities of several enzymes which are inactive in their acetylated form; NAD-dependent deacetylase 2075532 cobB 2884953 cobB Pectobacterium atrosepticum SCRI1043 NAD-dependent deacetylase YP_049924.1 2074702 D 218491 CDS YP_049925.1 50120758 2885146 complement(2075555..2075833) 1 NC_004547.2 no significant database matches; hypothetical protein 2075833 2885146 ECA1828 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049925.1 2075555 R 218491 CDS YP_049926.1 50120759 2885147 complement(2076005..2076721) 1 NC_004547.2 Similar to Pseudomonas aeruginosa transcriptional activator protein Anr or pa1544 SWALL:ANR_PSEAE (SWALL:P23926) (244 aa) fasta scores: E(): 2.9e-09, 25.59% id in 211 aa, and to Pseudomonas stutzeri DnrE protein DnrE SWALL:Q9X7J7 (EMBL:AJ131716) (231 aa) fasta scores: E(): 8.4e-10, 28% id in 175 aa; Crp/Fnr family transcriptional regulator 2076721 2885147 ECA1829 Pectobacterium atrosepticum SCRI1043 Crp/Fnr family transcriptional regulator YP_049926.1 2076005 R 218491 CDS YP_049927.1 50120760 2885148 2076838..2077179 1 NC_004547.2 Similar to Methanosarcina mazei hypothetical protein Mm1422 SWALL:Q8PX00 (EMBL:AE013376) (107 aa) fasta scores: E(): 1.9e-13, 43.56% id in 101 aa, and to Fusobacterium nucleatum hypothetical cytosolic protein Fn1305 SWALL:Q8RE25 (EMBL:AE010636) (111 aa) fasta scores: E(): 6e-08, 35.92% id in 103 aa; hypothetical protein 2077179 2885148 ECA1830 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049927.1 2076838 D 218491 CDS YP_049928.1 50120761 2885081 2077218..2077982 1 NC_004547.2 Similar to Haemophilus influenzae hypothetical protein Hi0095 SWALL:Y095_HAEIN (SWALL:Q57060) (251 aa) fasta scores: E(): 1e-51, 54.33% id in 254 aa, and to Pasteurella multocida hypothetical protein Pm1158 SWALL:Q9CLQ7 (EMBL:AE006156) (251 aa) fasta scores: E(): 1.9e-51, 53.54% id in 254 aa; methyltransferase 2077982 2885081 ECA1831 Pectobacterium atrosepticum SCRI1043 methyltransferase YP_049928.1 2077218 D 218491 CDS YP_049929.1 50120762 2882364 2078193..2079188 1 NC_004547.2 with BtuD and BtuF transports vitamin B12 into the cell; vtamin B12-transporter permease 2079188 btuC 2882364 btuC Pectobacterium atrosepticum SCRI1043 vtamin B12-transporter permease YP_049929.1 2078193 D 218491 CDS YP_049930.1 50120763 2882366 2079241..2079792 1 NC_004547.2 similar to glutathione peroxidase; member of the btuCED operon which is required for vitamin B12 transport across the inner membrane; glutathione peroxidase 2079792 btuE 2882366 btuE Pectobacterium atrosepticum SCRI1043 glutathione peroxidase YP_049930.1 2079241 D 218491 CDS YP_049931.1 50120764 2882365 2079817..2080569 1 NC_004547.2 ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell; vitamin B12-transporter ATPase 2080569 btuD 2882365 btuD Pectobacterium atrosepticum SCRI1043 vitamin B12-transporter ATPase YP_049931.1 2079817 D 218491 CDS YP_049932.1 50120765 2881291 2080938..2081411 1 NC_004547.2 Similar to Escherichia coli probable lipoprotein nlpc precursor NlpC or b1708 SWALL:NLPC_ECOLI (SWALL:P23898) (154 aa) fasta scores: E(): 5e-43, 66.02% id in 156 aa, and to Yersinia pestis lipoprotein NlpC or ypo2415 or y1925 SWALL:Q8ZDY1 (EMBL:AJ414152) (154 aa) fasta scores: E(): 2.7e-43, 68.79% id in 157 aa; lipoprotein 2081411 nlpC 2881291 nlpC Pectobacterium atrosepticum SCRI1043 lipoprotein YP_049932.1 2080938 D 218491 CDS YP_049933.1 50120766 2881721 complement(2081520..2083361) 1 NC_004547.2 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 2083361 edd 2881721 edd Pectobacterium atrosepticum SCRI1043 phosphogluconate dehydratase YP_049933.1 2081520 R 218491 CDS YP_049934.1 50120767 2885082 2083658..2083858 1 NC_004547.2 no significant database matches; hypothetical protein 2083858 2885082 ECA1837 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049934.1 2083658 D 218491 CDS YP_049935.1 50120768 2881634 2084214..2085209 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 gluconate utilization system Gnt-I transcriptional repressor GntR or b3438 or c4227 SWALL:GNTR_ECOLI (SWALL:P46860) (331 aa) fasta scores: E(): 7.1e-94, 74.62% id in 331 aa; gluconate utilization system Gnt-I transcriptional repressor 2085209 gntR 2881634 gntR Pectobacterium atrosepticum SCRI1043 gluconate utilization system Gnt-I transcriptional repressor YP_049935.1 2084214 D 218491 CDS YP_049936.1 50120769 2885363 complement(2085214..2085741) 1 NC_004547.2 Similar to Escherichia coli thermosensitive gluconokinase IdnK or GntV or b4268 SWALL:IDNK_ECOLI (SWALL:P39208) (187 aa) fasta scores: E(): 5.8e-34, 62.02% id in 158 aa; gluconokinase 2085741 gntV 2885363 gntV Pectobacterium atrosepticum SCRI1043 gluconokinase YP_049936.1 2085214 R 218491 CDS YP_049937.1 50120770 2881636 2086038..2087372 1 NC_004547.2 Similar to Escherichia coli high-affinity gluconate transporter GntT or UsgA or GntM or b3415 SWALL:GNTT_ECOLI (SWALL:P39835) (437 aa) fasta scores: E(): 3e-118, 76.8% id in 444 aa; high-affinity gluconate transporter 2087372 gntT 2881636 gntT Pectobacterium atrosepticum SCRI1043 high-affinity gluconate transporter YP_049937.1 2086038 D 218491 CDS YP_049938.1 50120771 2885083 2087583..2088308 1 NC_004547.2 Similar to Escherichia coli hypothetical protein ydiv or b1707 SWALL:YDIV_ECOLI (SWALL:P76204) (237 aa) fasta scores: E(): 3.5e-23, 36.17% id in 235 aa, and to Shigella flexneri orf, conserved hypothetical protein ydiv or sf1524 SWALL:AAN43114 (EMBL:AE015175) (237 aa) fasta scores: E(): 3.1e-22, 35.74% id in 235 aa; hypothetical protein 2088308 2885083 ECA1841 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049938.1 2087583 D 218491 CDS YP_049939.1 50120772 2885186 2088494..2089945 1 NC_004547.2 Similar to Escherichia coli hypothetical protein ydiu or b1706 SWALL:YDIU_ECOLI (SWALL:P77649) (478 aa) fasta scores: E(): 5.7e-126, 64.56% id in 477 aa, and to Salmonella typhimurium cytoplasmic protein ydiu or stm1345 SWALL:Q8ZPS5 (EMBL:AE008758) (480 aa) fasta scores: E(): 7.7e-126, 63.59% id in 478 aa; hypothetical protein 2089945 2885186 ECA1842 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049939.1 2088494 D 218491 CDS YP_049940.1 50120773 2881904 complement(2089965..2090762) 1 NC_004547.2 with HmuTU is involved in the transport of hemin; hemin importer ATP-binding subunit 2090762 hmuV 2881904 hmuV Pectobacterium atrosepticum SCRI1043 hemin importer ATP-binding subunit YP_049940.1 2089965 R 218491 CDS YP_049941.1 50120774 2881886 complement(2090755..2091759) 1 NC_004547.2 Similar to Yersinia pestis hemin transport system permease protein HmuU or ypo0280 or y0540 SWALL:HMUU_YERPE (SWALL:Q56992) (334 aa) fasta scores: E(): 2.2e-91, 72.34% id in 329 aa; hemin transport system permease 2091759 hmuU 2881886 hmuU Pectobacterium atrosepticum SCRI1043 hemin transport system permease YP_049941.1 2090755 R 218491 CDS YP_049942.1 50120775 2881885 complement(2091756..2092574) 1 NC_004547.2 Similar to Yersinia pestis hemin-binding periplasmic protein HmuT precursor HmuT or ypo0281 or y0541 SWALL:HMUT_YERPE (SWALL:Q56991) (279 aa) fasta scores: E(): 2.7e-57, 60.66% id in 272 aa; hemin-binding periplasmic protein 2092574 hmuT 2881885 hmuT Pectobacterium atrosepticum SCRI1043 hemin-binding periplasmic protein YP_049942.1 2091756 R 218491 CDS YP_049943.1 50120776 2882232 complement(2092571..2093620) 1 NC_004547.2 Similar to Yersinia enterocolitica hemin transport protein HemS SWALL:HEMS_YEREN (SWALL:P31517) (345 aa) fasta scores: E(): 2.2e-92, 65.33% id in 349 aa; hemin transport protein 2093620 hemS 2882232 hemS Pectobacterium atrosepticum SCRI1043 hemin transport protein YP_049943.1 2092571 R 218491 CDS YP_049944.1 50120777 2883200 complement(2093827..2095149) 1 NC_004547.2 Similar to Klebsiella pneumoniae 6-phospho-alpha-glucosidase AglB SWALL:AGLB_KLEPN (SWALL:Q9AGA6) (440 aa) fasta scores: E(): 1.4e-152, 82.95% id in 440 aa; 6-phospho-alpha-glucosidase 2095149 aglB 2883200 aglB Pectobacterium atrosepticum SCRI1043 6-phospho-alpha-glucosidase YP_049944.1 2093827 R 218491 CDS YP_049945.1 50120778 2883214 complement(2095152..2096741) 1 NC_004547.2 Similar to Klebsiella pneumoniae PTS system, alpha-glucoside-specific IIBC component AglA SWALL:PTAB_KLEPN (SWALL:Q9AGA7) (540 aa) fasta scores: E(): 6.7e-142, 69.04% id in 533 aa; PTS system alpha-glucoside-specific transporter subunit IIBC 2096741 aglA 2883214 aglA Pectobacterium atrosepticum SCRI1043 PTS system alpha-glucoside-specific transporter subunit IIBC YP_049945.1 2095152 R 218491 CDS YP_049946.1 50120779 2885187 2097009..2097755 1 NC_004547.2 Similar to Escherichia coli fatty acyl responsive regulator farr or g30 or b0730 SWALL:FARR_ECOLI (SWALL:P13669) (240 aa) fasta scores: E(): 6e-25, 33.19% id in 235 aa, and to Shigella flexneri transcriptional regulator yidp or sf3779 SWALL:AAN45221 (EMBL:AE015385) (224 aa) fasta scores: E(): 1.8e-45, 54.01% id in 224 aa; GntR family transcriptional regulator 2097755 2885187 ECA1849 Pectobacterium atrosepticum SCRI1043 GntR family transcriptional regulator YP_049946.1 2097009 D 218491 CDS YP_049947.1 50120780 2881780 complement(2097796..2099496) 1 NC_004547.2 Similar to Erwinia rhapontici sucrose isomerase PalI SWALL:Q9AI64 (EMBL:AF279281) (600 aa) fasta scores: E(): 1.7e-171, 70.25% id in 558 aa; sucrose isomerase 2099496 palI 2881780 palI Pectobacterium atrosepticum SCRI1043 sucrose isomerase YP_049947.1 2097796 R 218491 CDS YP_049948.1 50120781 2884131 complement(2099981..2101027) 1 NC_004547.2 tryptophan sensitive; catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate; phospho-2-dehydro-3-deoxyheptonate aldolase 2101027 aroH 2884131 aroH Pectobacterium atrosepticum SCRI1043 phospho-2-dehydro-3-deoxyheptonate aldolase YP_049948.1 2099981 R 218491 CDS YP_049949.1 50120782 2885188 complement(2101232..2102053) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2410 or y1929 SWALL:AAM85495 (EMBL:AJ414152) (273 aa) fasta scores: E(): 8.8e-89, 83.15% id in 273 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein ydia or b1703 or c2099 or z2732 or ecs2410 or sf1527 SWALL:YDIA_ECOLI (SWALL:P03822) (277 aa) fasta scores: E(): 1.4e-85, 80.22% id in 273 aa; hypothetical protein 2102053 2885188 ECA1852 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049949.1 2101232 R 218491 CDS YP_049950.1 50120783 2882730 2102354..2104732 1 NC_004547.2 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 2104732 ppsA 2882730 ppsA Pectobacterium atrosepticum SCRI1043 phosphoenolpyruvate synthase YP_049950.1 2102354 D 218491 CDS YP_049951.1 50120784 2884176 complement(2105019..2106065) 1 NC_004547.2 catalyzes the conversion of aminoimidazole ribotide to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine moiety of thiamine; involved in the maintenance and/or assembly of sulfur clusters; periplasmic lipoporotein anchored to the inner membrane; part of the thiamine pyrophosphate biosynthesis pathway; thiamine biosynthesis lipoprotein ApbE 2106065 apbE 2884176 apbE Pectobacterium atrosepticum SCRI1043 thiamine biosynthesis lipoprotein ApbE YP_049951.1 2105019 R 218491 CDS YP_049952.2 161501878 2885093 complement(2106565..2107677) 1 NC_004547.2 YdiK; inner membrane protein; ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated; unknown function; inner membrane protein 2107677 2885093 ECA1855 Pectobacterium atrosepticum SCRI1043 inner membrane protein YP_049952.2 2106565 R 218491 CDS YP_049953.1 50120786 2885094 2108085..2111138 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2407 or y1932 SWALL:AAM85498 (EMBL:AJ414152) (1018 aa) fasta scores: E(): 0, 82.41% id in 1018 aa, and to Escherichia coli hypothetical protein ydij or b1687 SWALL:YDIJ_ECOLI (SWALL:P77748) (1018 aa) fasta scores: E(): 0, 79.05% id in 1017 aa; FAD-binding oxidase 2111138 2885094 ECA1856 Pectobacterium atrosepticum SCRI1043 FAD-binding oxidase YP_049953.1 2108085 D 218491 CDS YP_049954.1 50120787 2885095 2111138..2111554 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2406 or y1933 SWALL:Q8ZDY8 (EMBL:AJ414152) (138 aa) fasta scores: E(): 1.6e-41, 77.37% id in 137 aa, and to Escherichia coli hypothetical protein ydii or b1686 SWALL:YDII_ECOLI (SWALL:P77781) (136 aa) fasta scores: E(): 9e-38, 69.11% id in 136 aa; hypothetical protein 2111554 2885095 ECA1857 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049954.1 2111138 D 218491 CDS YP_049955.1 50120788 2884621 complement(2111618..2112019) 1 NC_004547.2 no significant database matches; hypothetical protein 2112019 2884621 ECA1858 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049955.1 2111618 R 218491 CDS YP_049956.1 50120789 2884335 2112446..2112817 1 NC_004547.2 functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]; [4Fe-4S]) are assembled; forms a homodimer; similar to IscA protein; iron-sulfur cluster assembly scaffold protein 2112817 sufA 2884335 sufA Pectobacterium atrosepticum SCRI1043 iron-sulfur cluster assembly scaffold protein YP_049956.1 2112446 D 218491 CDS YP_049957.1 50120790 2884336 2112831..2114330 1 NC_004547.2 with SufCD activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufB 2114330 sufB 2884336 sufB Pectobacterium atrosepticum SCRI1043 cysteine desulfurase activator complex subunit SufB YP_049957.1 2112831 D 218491 CDS YP_049958.1 50120791 2884337 2114428..2115174 1 NC_004547.2 part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; cysteine desulfurase ATPase 2115174 sufC 2884337 sufC Pectobacterium atrosepticum SCRI1043 cysteine desulfurase ATPase YP_049958.1 2114428 D 218491 CDS YP_049959.1 50120792 2884332 2115176..2116495 1 NC_004547.2 with SufBC activates cysteine desulfurase SufS; cysteine desulfurase activator complex subunit SufD 2116495 sufD 2884332 sufD Pectobacterium atrosepticum SCRI1043 cysteine desulfurase activator complex subunit SufD YP_049959.1 2115176 D 218491 CDS YP_049960.1 50120793 2884329 2116495..2117718 1 NC_004547.2 catalyzes the formation of L-alanine and selenide or sulfanylcysteine from selenocysteine or cysteine; bifunctional cysteine desulfurase/selenocysteine lyase 2117718 sufS 2884329 sufS Pectobacterium atrosepticum SCRI1043 bifunctional cysteine desulfurase/selenocysteine lyase YP_049960.1 2116495 D 218491 CDS YP_049961.1 50120794 2884333 2117752..2118168 1 NC_004547.2 Acts with SufS to catalyze the formation of L-alanine from L-cysteine; cysteine desufuration protein SufE 2118168 sufE 2884333 sufE Pectobacterium atrosepticum SCRI1043 cysteine desufuration protein SufE YP_049961.1 2117752 D 218491 CDS YP_049962.1 50120795 2884622 2118557..2119579 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein y1940 SWALL:AAM85506 (EMBL:AE013797) (354 aa) fasta scores: E(): 4.6e-90, 72.64% id in 340 aa, and to Shigella flexneri orf, conserved hypothetical protein ycfs or sf1117 SWALL:AAN42735 (EMBL:AE015138) (321 aa) fasta scores: E(): 2.7e-68, 62.98% id in 308 aa; hypothetical protein 2119579 2884622 ECA1865 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049962.1 2118557 D 218491 CDS YP_049963.1 50120796 2882940 complement(2119771..2120007) 1 NC_004547.2 Similar to Erwinia amylovora major outer membrane lipoprotein precursor Lpp SWALL:MULI_ERWAM (SWALL:P02939) (78 aa) fasta scores: E(): 9e-23, 92.3% id in 78 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri major outer membrane lipoprotein precursor Lpp or MlpA or MulI or b1677 or c2072 or z2705 or ecs2384 or sf1706 SWALL:MULI_ECOLI (SWALL:P02937) (78 aa) fasta scores: E(): 1.8e-21, 89.74% id in 78 aa; major outer membrane lipoprotein 2120007 lpp 2882940 lpp Pectobacterium atrosepticum SCRI1043 major outer membrane lipoprotein YP_049963.1 2119771 R 218491 CDS YP_049964.1 50120797 2882673 complement(2120321..2121733) 1 NC_004547.2 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 2121733 pykF 2882673 pykF Pectobacterium atrosepticum SCRI1043 pyruvate kinase YP_049964.1 2120321 R 218491 CDS YP_049965.1 50120798 2884623 complement(2122001..2122237) 1 NC_004547.2 Weakly similar to Salmonella typhimurium cytoplasmic protein stm4422 SWALL:Q8ZK60 (EMBL:AE008907) (100 aa) fasta scores: E(): 8.7, 26.47% id in 68 aa, and to Pyrobaculum aerophilum ribosomal protein l24 pae3345 SWALL:Q8ZTA6 (EMBL:AE009925) (58 aa) fasta scores: E(): 9.4, 29.68% id in 64 aa; hypothetical protein 2122237 2884623 ECA1868 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049965.1 2122001 R 218491 CDS YP_049966.1 50120799 2884150 2122379..2123242 1 NC_004547.2 Similar to Erwinia chrysanthemi beta-glucoside operon antiterminator ArbG SWALL:ARBG_ERWCH (SWALL:P26211) (283 aa) fasta scores: E(): 1.8e-83, 76.07% id in 280 aa, and to Escherichia coli cryptic beta-glucoside bgl operon antiterminator BglG or BglC or b3723 SWALL:BGLG_ECOLI (SWALL:P11989) (278 aa) fasta scores: E(): 6.2e-56, 53.26% id in 276 aa. Also similar to ECA1452 (45.600% id. in 250 aa overlap), and to ECA4389 (46.400% id. in 274 aa overlap), and to ECA0858 (38.000% id. in 272 aa overlap); beta-glucoside operon antiterminator 2123242 arbG 2884150 arbG Pectobacterium atrosepticum SCRI1043 beta-glucoside operon antiterminator YP_049966.1 2122379 D 218491 CDS YP_049967.1 50120800 2884149 2123556..2125457 1 NC_004547.2 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system beta-glucoside-specific transporter subunit IIABC 2125457 arbF 2884149 arbF Pectobacterium atrosepticum SCRI1043 PTS system beta-glucoside-specific transporter subunit IIABC YP_049967.1 2123556 D 218491 CDS YP_049968.1 50120801 2884159 2125493..2126887 1 NC_004547.2 Similar to Erwinia chrysanthemi 6-phospho-beta-glucosidase ArbB SWALL:ARBB_ERWCH (SWALL:P26206) (465 aa) fasta scores: E(): 2.3e-165, 80.56% id in 463 aa, and to Escherichia coli 6-phospho-beta-glucosidase BglB or b3721 SWALL:BGLB_ECOLI (SWALL:P11988) (470 aa) fasta scores: E(): 1.1e-149, 72.6% id in 460 aa; 6-phospho-beta-glucosidase 2126887 arbB 2884159 arbB Pectobacterium atrosepticum SCRI1043 6-phospho-beta-glucosidase YP_049968.1 2125493 D 218491 CDS YP_049969.1 50120802 2884624 2127146..2128786 1 NC_004547.2 Similar to Aeromonas salmonicida maltoporin precursor LamB SWALL:LAMB_AERSA (SWALL:Q44287) (445 aa) fasta scores: E(): 1.8e-16, 32.18% id in 463 aa, and to Escherichia coli outer membrane protein yiec precursor yiec or b3720 SWALL:YIEC_ECOLI (SWALL:P26218) (538 aa) fasta scores: E(): 1.5e-109, 53.09% id in 550 aa; porin 2128786 2884624 ECA1872 Pectobacterium atrosepticum SCRI1043 porin YP_049969.1 2127146 D 218491 CDS YP_049970.1 50120803 2884579 2128873..2130063 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein yiel or c4641 SWALL:AAN83073 (EMBL:AE016769) (400 aa) fasta scores: E(): 4.7e-106, 70.57% id in 401 aa, and to Shigella flexneri xylanase yiel or sf3738 SWALL:AAN45183 (EMBL:AE015381) (402 aa) fasta scores: E(): 5.9e-105, 70.07% id in 401 aa; glycosyl hydrolase 2130063 2884579 ECA1873 Pectobacterium atrosepticum SCRI1043 glycosyl hydrolase YP_049970.1 2128873 D 218491 CDS YP_049971.1 50120804 2884580 2130168..2131181 1 NC_004547.2 Similar to Xanthomonas campestris inosine-uridine preferring nucleoside hydrolase xcc1038 SWALL:Q8PBT1 (EMBL:AE012200) (316 aa) fasta scores: E(): 5.3e-08, 29.32% id in 283 aa, and to Bradyrhizobium japonicum Blr4705 protein blr4705 SWALL:BAC49970 (EMBL:AP005952) (308 aa) fasta scores: E(): 8.5e-17, 28.66% id in 300 aa; inosine-uridine preferring nucleoside hydrolase 2131181 2884580 ECA1874 Pectobacterium atrosepticum SCRI1043 inosine-uridine preferring nucleoside hydrolase YP_049971.1 2130168 D 218491 CDS YP_049972.1 50120805 2881814 2131621..2133054 1 NC_004547.2 catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552; cytochrome c552 2133054 nrfA 2881814 nrfA Pectobacterium atrosepticum SCRI1043 cytochrome c552 YP_049972.1 2131621 D 218491 CDS YP_049973.1 50120806 2881815 2133102..2133671 1 NC_004547.2 part of nitrite reductase complex; NrfB is active at high nitrate conditions; NrfA, B, C, and D are essential for the formate-dependent nitrite reduction to ammonia; cytochrome c nitrite reductase pentaheme subunit 2133671 nrfB 2881815 nrfB Pectobacterium atrosepticum SCRI1043 cytochrome c nitrite reductase pentaheme subunit YP_049973.1 2133102 D 218491 CDS YP_049974.1 50120807 2885090 2133668..2134339 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri NrfC protein precursor NrfC or b4072 or z5671 or ecs5054 or sf4132 SWALL:NRFC_ECOLI (SWALL:P32708) (223 aa) fasta scores: E(): 8.4e-76, 83.4% id in 223 aa. Also similar to ECA0914 (56.444% id. in 225 aa overlap); nitrite reductase complex component 2134339 nrfC 2885090 nrfC Pectobacterium atrosepticum SCRI1043 nitrite reductase complex component YP_049974.1 2133668 D 218491 CDS YP_049975.1 50120808 2885091 2134336..2135298 1 NC_004547.2 Similar to Escherichia coli NrfD protein NrfD or b4073 SWALL:NRFD_ECOLI (SWALL:P32709) (318 aa) fasta scores: E(): 2.2e-95, 73.56% id in 314 aa. Also similar to ECA0913 (50.784% id. in 319 aa overlap); nitrite reductase complex component 2135298 nrfD 2885091 nrfD Pectobacterium atrosepticum SCRI1043 nitrite reductase complex component YP_049975.1 2134336 D 218491 CDS YP_049976.1 50120809 2885092 2135317..2137194 1 NC_004547.2 with NrfF and NrfG catalyzes the insertion of heme into cytochrome c552; heme lyase subunit NrfE 2137194 nrfE 2885092 nrfE Pectobacterium atrosepticum SCRI1043 heme lyase subunit NrfE YP_049976.1 2135317 D 218491 CDS YP_049977.1 50120810 2885413 2137187..2137588 1 NC_004547.2 Similar to Escherichia coli formate-dependent nitrite reductase complex NrfF subunit precursor nrff or b4075 SWALL:NRFF_ECOLI (SWALL:P32711) (127 aa) fasta scores: E(): 1.3e-26, 59.35% id in 123 aa; formate-dependent nitrite reductase complex subunit NrfF 2137588 nrfF 2885413 nrfF Pectobacterium atrosepticum SCRI1043 formate-dependent nitrite reductase complex subunit NrfF YP_049977.1 2137187 D 218491 CDS YP_049978.1 50120811 2885414 2137585..2138415 1 NC_004547.2 Similar to Escherichia coli formate-dependent nitrite reductase complex NrfG subunit NrfG or b4076 SWALL:NRFG_ECOLI (SWALL:P32712) (198 aa) fasta scores: E(): 3.6e-35, 55.78% id in 190 aa; formate-dependent nitrite reductase complex subunit NrfG 2138415 nrfG 2885414 nrfG Pectobacterium atrosepticum SCRI1043 formate-dependent nitrite reductase complex subunit NrfG YP_049978.1 2137585 D 218491 CDS YP_049979.1 50120812 2882166 2138606..2139226 1 NC_004547.2 ATP-binding protein; required for proper cytochrome c maturation; cytochrome c biogenesis protein CcmA 2139226 ccmA 2882166 ccmA Pectobacterium atrosepticum SCRI1043 cytochrome c biogenesis protein CcmA YP_049979.1 2138606 D 218491 CDS YP_049980.1 50120813 2882167 2139226..2139882 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 heme exporter protein B CcmB or b2200 or c2737 or z3457 or ecs3089 SWALL:CCMB_ECOLI (SWALL:P33930) (220 aa) fasta scores: E(): 4.7e-62, 78.24% id in 216 aa; heme exporter protein B 2139882 ccmB 2882167 ccmB Pectobacterium atrosepticum SCRI1043 heme exporter protein B YP_049980.1 2139226 D 218491 CDS YP_049981.1 50120814 2882168 2139951..2140691 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri heme exporter protein C CcmC or b2199 or c2736 or z3456 or ecs3088 or sf2283 SWALL:CCMC_ECOLI (SWALL:P33929) (245 aa) fasta scores: E(): 3.1e-70, 69.54% id in 243 aa; heme exporter protein C 2140691 ccmC 2882168 ccmC Pectobacterium atrosepticum SCRI1043 heme exporter protein C YP_049981.1 2139951 D 218491 CDS YP_049982.1 50120815 2881537 2140688..2140909 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri heme exporter protein D CcmD or b2198 or c2735 or z3455 or ecs3087 or sf2282 SWALL:CCMD_ECOLI (SWALL:P36770) (69 aa) fasta scores: E(): 1.1e-11, 52.23% id in 67 aa; heme exporter protein D 2140909 ccmD 2881537 ccmD Pectobacterium atrosepticum SCRI1043 heme exporter protein D YP_049982.1 2140688 D 218491 CDS YP_049983.1 50120816 2881538 2140906..2141388 1 NC_004547.2 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; cytochrome c-type biogenesis protein CcmE 2141388 ccmE 2881538 ccmE Pectobacterium atrosepticum SCRI1043 cytochrome c-type biogenesis protein CcmE YP_049983.1 2140906 D 218491 CDS YP_049984.1 50120817 2881539 2141385..2143340 1 NC_004547.2 Similar to Escherichia coli cytochrome C-type biogenesis protein CcmF or b2196 SWALL:CCMF_ECOLI (SWALL:P33927) (647 aa) fasta scores: E(): 1.2e-198, 74% id in 650 aa; cytochrome C-type biogenesis protein 2143340 ccmF 2881539 ccmF Pectobacterium atrosepticum SCRI1043 cytochrome C-type biogenesis protein YP_049984.1 2141385 D 218491 CDS YP_049985.1 50120818 2882296 2143337..2143894 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri thiol:disulfide interchange protein DsbE or CcmG or b2195 or z3452 or ecs3084 or sf2279 SWALL:DSBE_ECOLI (SWALL:P33926) (185 aa) fasta scores: E(): 5.4e-57, 77.47% id in 182 aa; thiol:disulfide interchange protein 2143894 dsbE 2882296 dsbE Pectobacterium atrosepticum SCRI1043 thiol:disulfide interchange protein YP_049985.1 2143337 D 218491 CDS YP_049986.1 50120819 2881777 2143891..2144349 1 NC_004547.2 Similar to the N-terminal half of Escherichia coli, and Shigella flexneri cytochrome c-type biogenesis protein CcmH precursor CcmH or b2194 or sf2278 SWALL:CCMH_ECOLI (SWALL:P33925) (350 aa) fasta scores: E(): 1e-28, 59.12% id in 137 aa; cytochrome C-type biogenesis protein 2144349 ccmH1 2881777 ccmH1 Pectobacterium atrosepticum SCRI1043 cytochrome C-type biogenesis protein YP_049986.1 2143891 D 218491 CDS YP_049987.1 50120820 2881778 2144346..2145215 1 NC_004547.2 Similar to the C-terminal half of Escherichia coli, and Shigella flexneri cytochrome C-type biogenesis protein CcmH precursor CcmH or b2194 or sf2278 SWALL:CCMH_ECOLI (SWALL:P33925) (350 aa) fasta scores: E(): 5.9e-35, 48.14% id in 216 aa; cytochrome C-type biogenesis protein 2145215 ccmH2 2881778 ccmH2 Pectobacterium atrosepticum SCRI1043 cytochrome C-type biogenesis protein YP_049987.1 2144346 D 218491 CDS YP_049988.1 50120821 2884581 2145339..2145536 1 NC_004547.2 DoubtfulCDS. No significant database matches; hypothetical protein 2145536 2884581 ECA1891 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049988.1 2145339 D 218491 CDS YP_049989.1 50120822 2884041 complement(2145886..2146500) 1 NC_004547.2 with NapABDFGH functions as a nitrate reductase; NapC functions as an electron shuttle between NapAB and NapGH or quinone; cytochrome c-type protein NapC 2146500 napC 2884041 napC Pectobacterium atrosepticum SCRI1043 cytochrome c-type protein NapC YP_049989.1 2145886 R 218491 CDS YP_049990.1 50120823 2884040 complement(2146497..2146934) 1 NC_004547.2 small subunit of periplasmic nitrate reductase; receives electrons from the membrane-bound NapC and passes them to NapA; citrate reductase cytochrome c-type subunit 2146934 napB 2884040 napB Pectobacterium atrosepticum SCRI1043 citrate reductase cytochrome c-type subunit YP_049990.1 2146497 R 218491 CDS YP_049991.1 50120824 2884003 complement(2146931..2147794) 1 NC_004547.2 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; quinol dehydrogenase membrane component 2147794 napH 2884003 napH Pectobacterium atrosepticum SCRI1043 quinol dehydrogenase membrane component YP_049991.1 2146931 R 218491 CDS YP_049992.1 50120825 2884002 complement(2147781..2148473) 1 NC_004547.2 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; quinol dehydrogenase periplasmic component 2148473 napG 2884002 napG Pectobacterium atrosepticum SCRI1043 quinol dehydrogenase periplasmic component YP_049992.1 2147781 R 218491 CDS YP_049993.1 50120826 2884039 complement(2148479..2150965) 1 NC_004547.2 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 2150965 napA 2884039 napA Pectobacterium atrosepticum SCRI1043 nitrate reductase catalytic subunit YP_049993.1 2148479 R 218491 CDS YP_049994.1 50120827 2884042 complement(2150962..2151231) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri napd protein NapD or b2207 or z3464 or ecs3096 or sf2291 SWALL:NAPD_ECOLI (SWALL:P33938) (87 aa) fasta scores: E(): 8.9e-14, 50.56% id in 89 aa; assembly protein for periplasmic nitrate reductase 2151231 napD 2884042 napD Pectobacterium atrosepticum SCRI1043 assembly protein for periplasmic nitrate reductase YP_049994.1 2150962 R 218491 CDS YP_049995.1 50120828 2884001 complement(2151228..2151764) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ferredoxin-type protein NapF or b2208 or c2747 or z3465 or ecs3097 SWALL:NAPF_ECOLI (SWALL:P33939) (164 aa) fasta scores: E(): 9.9e-37, 53.79% id in 158 aa; ferredoxin-type protein 2151764 napF 2884001 napF Pectobacterium atrosepticum SCRI1043 ferredoxin-type protein YP_049995.1 2151228 R 218491 CDS YP_049996.1 50120829 2884720 2151923..2152120 1 NC_004547.2 no significant database matches; hypothetical protein 2152120 2884720 ECA1899 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_049996.1 2151923 D 218491 CDS YP_049997.1 50120830 2883597 2152117..2153838 1 NC_004547.2 Similar to Escherichia coli nitrate/nitrite sensor protein NarQ or b2469 SWALL:NARQ_ECOLI (SWALL:P27896) (566 aa) fasta scores: E(): 3.6e-131, 64.45% id in 557 aa; nitrate/nitrite sensor protein NarQ 2153838 narQ 2883597 narQ Pectobacterium atrosepticum SCRI1043 nitrate/nitrite sensor protein NarQ YP_049997.1 2152117 D 218491 CDS YP_049998.1 50120831 2883596 2153926..2154558 1 NC_004547.2 nitrate/nitrite response regulator NarP; NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems; represses expression of other anaerobic genes; transcriptional regulator NarP 2154558 narP 2883596 narP Pectobacterium atrosepticum SCRI1043 transcriptional regulator NarP YP_049998.1 2153926 D 218491 CDS YP_049999.1 50120832 2884721 2154856..2155701 1 NC_004547.2 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa2917 SWALL:Q9HZT0 (EMBL:AE004718) (278 aa) fasta scores: E(): 1.8e-23, 31.85% id in 270 aa, and to Vibrio vulnificus arac-type DNA-binding domain-containing protein vv20572 SWALL:Q8D6G1 (EMBL:AE016810) (276 aa) fasta scores: E(): 4.4e-21, 30.65% id in 274 aa; AraC family transcriptional regulator 2155701 2884721 ECA1902 Pectobacterium atrosepticum SCRI1043 AraC family transcriptional regulator YP_049999.1 2154856 D 218491 CDS YP_050000.1 50120833 2884722 2155750..2157117 1 NC_004547.2 Similar to Mycobacterium tuberculosis two-domain membrane protein rv3728 or mt3831 or mtv025.076 SWALL:O69695 (EMBL:AL022121) (1071 aa) fasta scores: E(): 1.6e-42, 38.68% id in 455 aa, and to Streptomyces coelicolor integral membrane efflux protein sco6553 or sc4b5.03C SWALL:Q9ZBW5 (EMBL:AL939128) (504 aa) fasta scores: E(): 1.1e-33, 35.12% id in 410 aa; hypothetical protein 2157117 2884722 ECA1903 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050000.1 2155750 D 218491 CDS YP_050001.1 50120834 2884678 complement(2157266..2158261) 1 NC_004547.2 Similar to Rhizobium loti probable zinc-binding oxidoreductase mll2116 SWALL:Q98J41 (EMBL:AP002999) (334 aa) fasta scores: E(): 2.9e-75, 64.56% id in 333 aa, and to Agrobacterium tumefaciens zinc-binding oxidoreductase atu5447 or agr_pat_656 SWALL:Q8UJM9 (EMBL:AE008965) (359 aa) fasta scores: E(): 2.5e-74, 62.23% id in 331 aa; zinc-binding dehydrogenase 2158261 2884678 ECA1904 Pectobacterium atrosepticum SCRI1043 zinc-binding dehydrogenase YP_050001.1 2157266 R 218491 CDS YP_050002.1 50120835 2884679 complement(2158370..2159158) 1 NC_004547.2 Similar to Pseudomonas putida oxidoreductase, short chain dehydrogenase/reductase family pp2989 SWALL:AAN68597 (EMBL:AE016785) (264 aa) fasta scores: E(): 7.5e-67, 74.71% id in 261 aa, and to Agrobacterium tumefaciens short-chain dehydrogenase atu5444 or agr_pat_651 SWALL:Q8UJN2 (EMBL:AE008965) (287 aa) fasta scores: E(): 4.6e-55, 64.86% id in 259 aa; short chain dehydrogenase 2159158 2884679 ECA1905 Pectobacterium atrosepticum SCRI1043 short chain dehydrogenase YP_050002.1 2158370 R 218491 CDS YP_050003.1 50120836 2884680 2160262..2161053 1 NC_004547.2 Similar to Clostridium perfringens hypothetical protein Cpe0723 cpe0723 SWALL:Q8XMG6 (EMBL:AP003187) (262 aa) fasta scores: E(): 2.4e-24, 33.07% id in 260 aa, and to Vibrio vulnificus predicted hydrolase of the had superfamily vv21429 SWALL:AAO08308 (EMBL:AE016813) (267 aa) fasta scores: E(): 2.1e-23, 31.67% id in 262 aa; hydrolase 2161053 2884680 ECA1906 Pectobacterium atrosepticum SCRI1043 hydrolase YP_050003.1 2160262 D 218491 CDS YP_050004.1 50120837 2884658 complement(2161087..2161860) 1 NC_004547.2 Similar to Rhizobium meliloti transcription regulator protein r03273 or smc03890 SWALL:Q92L17 (EMBL:AL591793) (260 aa) fasta scores: E(): 1.2e-30, 37.5% id in 248 aa, and to Agrobacterium tumefaciens transcriptional regulator, DeoR family atu2725 or agr_c_4939 SWALL:Q8UBX4 (EMBL:AE009218) (266 aa) fasta scores: E(): 1.2e-30, 39.67% id in 247 aa; DeoR family transcriptional regulator 2161860 2884658 ECA1907 Pectobacterium atrosepticum SCRI1043 DeoR family transcriptional regulator YP_050004.1 2161087 R 218491 CDS YP_050005.1 50120838 2884659 2162123..2163253 1 NC_004547.2 Similar to Rhodococcus fascians integral membrane protein SWALL:CAD52983 (EMBL:AJ301559) (379 aa) fasta scores: E(): 2.4e-32, 35.1% id in 376 aa, and to Leptospira interrogans predicted DNA repair exonuclease la3166 SWALL:AAN50364 (EMBL:AE011479) (280 aa) fasta scores: E(): 1.5e-31, 40.22% id in 271 aa; membrane-attached phosphoesterase 2163253 2884659 ECA1908 Pectobacterium atrosepticum SCRI1043 membrane-attached phosphoesterase YP_050005.1 2162123 D 218491 CDS YP_050006.1 50120839 2885367 2163569..2165743 1 NC_004547.2 Similar to Legionella pneumophila catalase-peroxidase KatB SWALL:Q9ZGM4 (EMBL:AF078110) (721 aa) fasta scores: E(): 0, 78.28% id in 723 aa, and to Synechococcus sp. catalase-peroxidase SWALL:Q9R6S9 (EMBL:AF197161) (720 aa) fasta scores: E(): 0, 78.75% id in 720 aa; catalase-peroxidase 2165743 katB 2885367 katB Pectobacterium atrosepticum SCRI1043 catalase-peroxidase YP_050006.1 2163569 D 218491 CDS YP_050007.1 50120840 2884660 complement(2165829..2166092) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo0865 or y3250 SWALL:Q8ZHM6 (EMBL:AJ414145) (106 aa) fasta scores: E(): 7.5e-08, 39.78% id in 93 aa; hypothetical protein 2166092 2884660 ECA1910 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050007.1 2165829 R 218491 CDS YP_050008.1 50120841 2883986 2166174..2166587 1 NC_004547.2 Similar to Pseudomonas aeruginosa multidrug resistance operon repressor MexR or pa0424 SWALL:MEXR_PSEAE (SWALL:P52003) (147 aa) fasta scores: E(): 1.3e-06, 30.07% id in 133 aa, and to Bradyrhizobium japonicum transcriptional regulatory protein bll4921 SWALL:BAC50186 (EMBL:AP005953) (169 aa) fasta scores: E(): 7.3e-06, 40.2% id in 97 aa; MarR family transcriptional regulator 2166587 2883986 ECA1911 Pectobacterium atrosepticum SCRI1043 MarR family transcriptional regulator YP_050008.1 2166174 D 218491 CDS YP_050009.1 50120842 2883987 2166931..2167989 1 NC_004547.2 Similar to Escherichia coli taurine-binding periplasmic protein precursor TauA or SsiA or b0365 SWALL:TAUA_ECOLI (SWALL:Q47537) (320 aa) fasta scores: E(): 9.5e-05, 22.56% id in 226 aa, and to Caulobacter crescentus ABC transporter, periplasmic substrate-binding protein cc1833 SWALL:Q9A793 (EMBL:AE005857) (369 aa) fasta scores: E(): 3.6e-67, 55.78% id in 337 aa, and to Synechocystis sp. hypothetical protein Sll1080 SWALL:P73267 (EMBL:D90905) (352 aa) fasta scores: E(): 1.5e-19, 28.97% id in 283 aa; ABC transporter periplasmic protein 2167989 2883987 ECA1912 Pectobacterium atrosepticum SCRI1043 ABC transporter periplasmic protein YP_050009.1 2166931 D 218491 CDS YP_050010.1 50120843 2883988 2168013..2168828 1 NC_004547.2 Similar to Escherichia coli taurine transport system permease protein TauC or SsiC or b0367 SWALL:TAUC_ECOLI (SWALL:Q47539) (275 aa) fasta scores: E(): 1.8e-22, 35.07% id in 268 aa, and to Caulobacter crescentus ABC transporter, permease protein cc1832 SWALL:Q9A794 (EMBL:AE005857) (271 aa) fasta scores: E(): 1.8e-50, 53% id in 266 aa; ABC transporter permease 2168828 2883988 ECA1913 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_050010.1 2168013 D 218491 CDS YP_050011.1 50120844 2883989 2168825..2169616 1 NC_004547.2 Similar to Caulobacter crescentus ABC transporter, ATP-binding protein cc1831 SWALL:Q9A795 (EMBL:AE005857) (253 aa) fasta scores: E(): 1e-52, 57.74% id in 239 aa, and to Synechocystis sp. nitrate transport protein NrtD or slr0044 SWALL:Q55463 (EMBL:D64006) (282 aa) fasta scores: E(): 2.7e-29, 39.59% id in 245 aa; ABC transporter ATP-binding protein 2169616 2883989 ECA1914 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_050011.1 2168825 D 218491 CDS YP_050012.1 50120845 2883972 2169627..2170376 1 NC_004547.2 Similar to Caulobacter crescentus hypothetical protein Cc1827 SWALL:Q9A799 (EMBL:AE005857) (279 aa) fasta scores: E(): 4.8e-22, 37.88% id in 227 aa, and to Corynebacterium efficiens conserved hypothetical protein ce0715 SWALL:BAC17525 (EMBL:AP005216) (292 aa) fasta scores: E(): 2e-16, 33.47% id in 227 aa; hypothetical protein 2170376 2883972 ECA1915 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050012.1 2169627 D 218491 CDS YP_050013.1 50120846 2883973 2170388..2171023 1 NC_004547.2 Similar to Caulobacter crescentus hypothetical protein Cc1828 SWALL:Q9A798 (EMBL:AE005857) (208 aa) fasta scores: E(): 7.8e-41, 53.03% id in 198 aa, and to Corynebacterium efficiens conserved hypothetical protein ce0714 SWALL:BAC17524 (EMBL:AP005216) (238 aa) fasta scores: E(): 1.6e-32, 43.78% id in 201 aa; hypothetical protein 2171023 2883973 ECA1916 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050013.1 2170388 D 218491 CDS YP_050014.1 50120847 2883974 2171266..2174868 1 NC_004547.2 Similar to the C-terminal region of Saccharomyces cerevisiae urea amidolyase [includes: urea carboxylase and allophanate hydrolase Dur1,2 or ybr208c or ybr1448 SWALL:DUR1_YEAST (SWALL:P32528) (1835 aa) fasta scores: E(): 3.6e-203, 44.47% id in 1212 aa, and to Caulobacter crescentus urea amidolyase-related protein cc1829 SWALL:Q9A797 (EMBL:AE005857) (1207 aa) fasta scores: E(): 0, 56.38% id in 1206 aa; allophanate hydrolase 2174868 2883974 ECA1917 Pectobacterium atrosepticum SCRI1043 allophanate hydrolase YP_050014.1 2171266 D 218491 CDS YP_050015.1 50120848 2883930 complement(2174920..2175615) 1 NC_004547.2 Similar to Shigella flexneri orf, conserved hypothetical protein ykgg or sf0258 SWALL:AAN41918 (EMBL:AE015061) (231 aa) fasta scores: E(): 4.1e-59, 66.23% id in 231 aa, and to Escherichia coli hypothetical protein ykgg or b0308 SWALL:YKGG_ECOLI (SWALL:P77433) (231 aa) fasta scores: E(): 1.3e-58, 65.8% id in 231 aa; hypothetical protein 2175615 2883930 ECA1918 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050015.1 2174920 R 218491 CDS YP_050016.1 50120849 2883931 complement(2175615..2177036) 1 NC_004547.2 Similar to Escherichia coli electron transport protein ykgf or b0307 SWALL:YKGF_ECOLI (SWALL:P77536) (475 aa) fasta scores: E(): 1.4e-163, 85.83% id in 473 aa, and to Shigella flexneri orf, conserved hypothetical protein ykgf or sf0259 SWALL:AAN41919 (EMBL:AE015061) (475 aa) fasta scores: E(): 1.7e-163, 85.83% id in 473 aa; electron transport protein 2177036 2883931 ECA1919 Pectobacterium atrosepticum SCRI1043 electron transport protein YP_050016.1 2175615 R 218491 CDS YP_050017.1 50120850 2883932 complement(2177046..2177765) 1 NC_004547.2 Similar to Escherichia coli hypothetical protein ykge or b0306 SWALL:YKGE_ECOLI (SWALL:P77252) (239 aa) fasta scores: E(): 3.5e-78, 79.49% id in 239 aa, and to Shigella flexneri dehydrogenase subunit ykge or sf0260 SWALL:AAN41920 (EMBL:AE015061) (239 aa) fasta scores: E(): 1.7e-78, 80.33% id in 239 aa; hypothetical protein 2177765 2883932 ECA1920 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050017.1 2177046 R 218491 CDS YP_050018.1 50120851 2883924 complement(2177811..2179364) 1 NC_004547.2 Similar to Streptococcus iniae L-lactate permease LctP SWALL:LCTP_STRIN (SWALL:O33654) (474 aa) fasta scores: E(): 4.3e-39, 41.53% id in 455 aa, and to Escherichia coli L-lactate permease LLdP or LctP or b3603 SWALL:LLDP_ECOLI (SWALL:P33231) (551 aa) fasta scores: E(): 7.8e-27, 33.64% id in 535 aa; L-lactate permease 2179364 2883924 ECA1921 Pectobacterium atrosepticum SCRI1043 L-lactate permease YP_050018.1 2177811 R 218491 CDS YP_050019.1 50120852 2881996 complement(2179897..2181270) 1 NC_004547.2 NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones; multidrug efflux protein 2181270 norM 2881996 norM Pectobacterium atrosepticum SCRI1043 multidrug efflux protein YP_050019.1 2179897 R 218491 CDS YP_050020.1 50120853 2883925 2181519..2182154 1 NC_004547.2 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 2182154 2883925 ECA1923 Pectobacterium atrosepticum SCRI1043 riboflavin synthase subunit alpha YP_050020.1 2181519 D 218491 CDS YP_050021.1 50120854 2881442 complement(2182216..2183367) 1 NC_004547.2 catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; cyclopropane-fatty-acyl-phospholipid synthase 2183367 cfa 2881442 cfa Pectobacterium atrosepticum SCRI1043 cyclopropane-fatty-acyl-phospholipid synthase YP_050021.1 2182216 R 218491 CDS YP_050022.1 50120855 2884639 complement(2183675..2184700) 1 NC_004547.2 binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis; is involved in regulation of purB, purC, purEK, purHD, purL, purMN and guaBA expression; binds hypoxanthine and guanine as inducers; DNA-binding transcriptional repressor PurR 2184700 purR 2884639 purR Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional repressor PurR YP_050022.1 2183675 R 218491 CDS YP_050023.1 50120856 2883926 complement(2185274..2186125) 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo2385 SWALL:Q8ZE05 (EMBL:AJ414152) (288 aa) fasta scores: E(): 3.8e-45, 54.94% id in 293 aa, and to Escherichia coli hypothetical protein ydho precursor ydho or b1655 SWALL:YDHO_ECOLI (SWALL:P76190) (271 aa) fasta scores: E(): 1.2e-37, 52.48% id in 282 aa; hypothetical protein 2186125 2883926 ECA1926 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050023.1 2185274 R 218491 CDS YP_050024.1 50120857 2883869 2186467..2186817 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri protein ydhd or b1654 or c2048 or z2676 or ecs2363 or sf1682 SWALL:YDHD_ECOLI (SWALL:P37010) (115 aa) fasta scores: E(): 5e-40, 88.79% id in 116 aa, and to Salmonella typhimurium, and Salmonella typhi glutaredoxin protein ydhd or stm1433 or sty1689 SWALL:Q8XGR7 (EMBL:AE008762) (115 aa) fasta scores: E(): 1.5e-40, 90.51% id in 116 aa; hypothetical protein 2186817 2883869 ECA1927 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050024.1 2186467 D 218491 CDS YP_050025.1 50120858 2885029 complement(2186929..2187600) 1 NC_004547.2 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); ribonuclease T 2187600 rnt 2885029 rnt Pectobacterium atrosepticum SCRI1043 ribonuclease T YP_050025.1 2186929 R 218491 CDS YP_050026.1 50120859 2881331 complement(2187750..2188157) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri lactoylglutathione lyase GloA or b1651 or z2669 or ecs2360 or sf1678 SWALL:LGUL_ECOLI (SWALL:Q59384) (135 aa) fasta scores: E(): 1.1e-41, 79.25% id in 135 aa; lactoylglutathione lyase 2188157 gloA 2881331 gloA Pectobacterium atrosepticum SCRI1043 lactoylglutathione lyase YP_050026.1 2187750 R 218491 CDS YP_050027.1 50120860 2883870 2188321..2188686 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo2376 SWALL:Q8ZE14 (EMBL:AJ414152) (121 aa) fasta scores: E(): 8.5e-22, 58.76% id in 97 aa, and to Escherichia coli O157:H7 orf, hypothetical protein z2665 or ecs2358 SWALL:Q8X634 (EMBL:AE005388) (125 aa) fasta scores: E(): 1.4e-19, 53.84% id in 104 aa; hypothetical protein 2188686 2883870 ECA1930 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050027.1 2188321 D 218491 CDS YP_050028.1 50120861 2881631 2188917..2189354 1 NC_004547.2 Transcription regulator that can both activate or repress expression; transcriptional regulator SlyA 2189354 hor 2881631 hor Pectobacterium atrosepticum SCRI1043 transcriptional regulator SlyA YP_050028.1 2188917 D 218491 CDS YP_050029.1 50120862 2881377 complement(2189487..2189954) 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum outer membrane lipoprotein Pcp SWALL:Q9RB08 (EMBL:AF168687) (155 aa) fasta scores: E(): 2.2e-44, 99.35% id in 155 aa, and to Serratia sp. ATCC 39006 outer membrane lipoprotein Pcp SWALL:Q9RA95 (EMBL:AF168597) (155 aa) fasta scores: E(): 9.6e-39, 83.22% id in 155 aa; outer membrane lipoprotein 2189954 pcp 2881377 pcp Pectobacterium atrosepticum SCRI1043 outer membrane lipoprotein YP_050029.1 2189487 R 218491 CDS YP_050030.1 50120863 2883871 2190305..2191417 1 NC_004547.2 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; anhydro-N-acetylmuramic acid kinase 2191417 anmK 2883871 anmK Pectobacterium atrosepticum SCRI1043 anhydro-N-acetylmuramic acid kinase YP_050030.1 2190305 D 218491 CDS YP_050031.1 50120864 2883865 2191515..2191832 1 NC_004547.2 Similar to Yersinia pestis lipoprotein ypo2371 SWALL:Q8ZE18 (EMBL:AJ414152) (104 aa) fasta scores: E(): 1.1e-16, 53.33% id in 105 aa, and to Yersinia enterocolitica hypothetical protein SWALL:YOR4_YEREN (SWALL:P28837) (101 aa) fasta scores: E(): 2.1e-15, 51.54% id in 97 aa; lipoprotein 2191832 2883865 ECA1934 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_050031.1 2191515 D 218491 CDS YP_050032.1 50120865 2882128 2191939..2192622 1 NC_004547.2 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; pyridoxamine 5'-phosphate oxidase 2192622 pdxH 2882128 pdxH Pectobacterium atrosepticum SCRI1043 pyridoxamine 5'-phosphate oxidase YP_050032.1 2191939 D 218491 CDS YP_050033.1 50120866 2884221 2192856..2194133 1 NC_004547.2 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 2194133 tyrS 2884221 tyrS Pectobacterium atrosepticum SCRI1043 tyrosyl-tRNA synthetase YP_050033.1 2192856 D 218491 CDS YP_050034.1 50120867 2882175 2194218..2195078 1 NC_004547.2 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; pyridoxamine kinase 2195078 pdxY 2882175 pdxY Pectobacterium atrosepticum SCRI1043 pyridoxamine kinase YP_050034.1 2194218 D 218491 CDS YP_050035.1 50120868 2883842 complement(2195117..2195725) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 glutathione s-transferase Gst or b1635 or z2647 or ecs2344 SWALL:GT_ECOLI (SWALL:P39100) (201 aa) fasta scores: E(): 3.8e-39, 53.23% id in 201 aa; glutathione S-transferase 2195725 gst 2883842 gst Pectobacterium atrosepticum SCRI1043 glutathione S-transferase YP_050035.1 2195117 R 218491 CDS YP_050036.1 50120869 2883866 2196576..2197859 1 NC_004547.2 Similar to Escherichia coli O157:H7 symport protein z0888 or ecs0758 SWALL:Q8X4W0 (EMBL:AE005251) (426 aa) fasta scores: E(): 2.1e-69, 49.63% id in 413 aa, and to Ralstonia solanacearum glutamate symport transmembrane protein rsc1957 or rs03531 SWALL:Q8XY06 (EMBL:AL646067) (428 aa) fasta scores: E(): 2.5e-96, 63.4% id in 429 aa; glutamate symport protein 2197859 2883866 ECA1939 Pectobacterium atrosepticum SCRI1043 glutamate symport protein YP_050036.1 2196576 D 218491 CDS YP_050037.1 50120870 2883867 2197950..2198201 1 NC_004547.2 no significant database matches; hypothetical protein 2198201 2883867 ECA1940 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050037.1 2197950 D 218491 CDS YP_050038.1 50120871 2884798 2198282..2200954 1 NC_004547.2 Catalyzes the conversion of citrate to isocitrate; aconitate hydratase 2200954 acnA 2884798 acnA Pectobacterium atrosepticum SCRI1043 aconitate hydratase YP_050038.1 2198282 D 218491 CDS YP_050039.1 50120872 2883868 2201168..2202799 1 NC_004547.2 Similar to Escherichia coli periplasmic oligopeptide-binding protein precursor OppA or b1243 SWALL:OPPA_ECOLI (SWALL:P23843) (543 aa) fasta scores: E(): 1.2e-106, 49.35% id in 545 aa; periplasmic oligopeptide-binding protein 2202799 2883868 ECA1942 Pectobacterium atrosepticum SCRI1043 periplasmic oligopeptide-binding protein YP_050039.1 2201168 D 218491 CDS YP_050040.1 50120873 2884801 complement(2202874..2203467) 1 NC_004547.2 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 2203467 ribA 2884801 ribA Pectobacterium atrosepticum SCRI1043 GTP cyclohydrolase II YP_050040.1 2202874 R 218491 CDS YP_050041.1 50120874 2884539 2203741..2204517 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri phosphatidylglycerophosphatase B PgpB or b1278 or z2529 or ecs1851 or sf1282 SWALL:PGPB_ECOLI (SWALL:P18201) (254 aa) fasta scores: E(): 6.1e-68, 61.75% id in 251 aa; phosphatidylglycerophosphatase B 2204517 pgpB 2884539 pgpB Pectobacterium atrosepticum SCRI1043 phosphatidylglycerophosphatase B YP_050041.1 2203741 D 218491 CDS YP_050042.1 50120875 2883832 2205803..2206441 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3317 or y0872 SWALL:Q9X6A8 (EMBL:AF135170) (205 aa) fasta scores: E(): 1.9e-27, 46.77% id in 186 aa; lipoprotein 2206441 2883832 ECA1947 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_050042.1 2205803 D 218491 CDS YP_050043.1 50120876 2883833 2206441..2207994 1 NC_004547.2 Similar to Escherichia coli D-xylose transport ATP-binding protein XylG or b3567 SWALL:XYLG_ECOLI (SWALL:P37388) (513 aa) fasta scores: E(): 3.6e-64, 41.23% id in 502 aa, and to Yersinia pestis sugar ABC transporter, ATP-binding protein ypo3316 or y0873 SWALL:AAM84458 (EMBL:AJ414156) (507 aa) fasta scores: E(): 2.3e-134, 78.52% id in 503 aa; sugar ABC transporter ATP-binding protein 2207994 2883833 ECA1948 Pectobacterium atrosepticum SCRI1043 sugar ABC transporter ATP-binding protein YP_050043.1 2206441 D 218491 CDS YP_050044.1 50120877 2883786 2207996..2209093 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ribose transport system permease protein RbsC or b3750 or c4678 or z5251 or ecs4692 SWALL:RBSC_ECOLI (SWALL:P04984) (321 aa) fasta scores: E(): 2e-30, 38.92% id in 316 aa, and to Yersinia pestis sugar ABC transporter, permease protein ypo3315 or RbsC or y0874 SWALL:Q8ZBT0 (EMBL:AJ414156) (381 aa) fasta scores: E(): 5.3e-111, 87.84% id in 362 aa; sugar ABC transporter permease 2209093 2883786 ECA1949 Pectobacterium atrosepticum SCRI1043 sugar ABC transporter permease YP_050044.1 2207996 D 218491 CDS YP_050045.1 50120878 2883787 2209283..2210113 1 NC_004547.2 Similar to the N-terminal region of Homo sapiens transketolase Tkt or Tkt1 SWALL:TKT_HUMAN (SWALL:P29401) (623 aa) fasta scores: E(): 1.8e-21, 34.22% id in 263 aa, and to Yersinia pestis N-terminal region of transketolase ypo3314 SWALL:Q8ZBT1 (EMBL:AJ414156) (276 aa) fasta scores: E(): 3e-96, 88.4% id in 276 aa; transketolase 2210113 2883787 ECA1950 Pectobacterium atrosepticum SCRI1043 transketolase YP_050045.1 2209283 D 218491 CDS YP_050046.1 50120879 2883788 2210106..2211050 1 NC_004547.2 Similar to Escherichia coli 1-deoxy-D-xylulose 5-phosphate synthase Dxs or b0420 SWALL:DXS_ECOLI (SWALL:P77488) (619 aa) fasta scores: E(): 7.6e-18, 30.24% id in 281 aa, and to Yersinia pestis c-terminal region of transketolase ypo3313 SWALL:Q8ZBT2 (EMBL:AJ414156) (314 aa) fasta scores: E(): 2e-97, 80.19% id in 313 aa; transketolase 2211050 2883788 ECA1951 Pectobacterium atrosepticum SCRI1043 transketolase YP_050046.1 2210106 D 218491 CDS YP_050047.1 50120880 2883735 2211053..2212543 1 NC_004547.2 Similar to Thermus aquaticus glycerol kinase GlpK SWALL:GLPK_THEAQ (SWALL:Q9WX53) (496 aa) fasta scores: E(): 3.1e-67, 41.63% id in 490 aa, and to Yersinia pestis glycerol kinase ypo3312 or GlpK or y0876 SWALL:Q8ZBT3 (EMBL:AJ414156) (495 aa) fasta scores: E(): 7.5e-143, 70.1% id in 495 aa; glycerol kinase 2212543 2883735 ECA1952 Pectobacterium atrosepticum SCRI1043 glycerol kinase YP_050047.1 2211053 D 218491 CDS YP_050048.1 50120881 2883736 2212644..2213642 1 NC_004547.2 Similar to Thermus thermophilus xylose isomerase xylA SWALL:XYLA_THETH (SWALL:P26997) (387 aa) fasta scores: E(): 8.9e-12, 26.58% id in 331 aa, and to Thermotoga maritima sugar isomerase tm1071 SWALL:Q9X0G0 (EMBL:AE001767) (383 aa) fasta scores: E(): 4e-10, 25.52% id in 333 aa; xylose isomerase 2213642 2883736 ECA1953 Pectobacterium atrosepticum SCRI1043 xylose isomerase YP_050048.1 2212644 D 218491 CDS YP_050049.1 50120882 2883737 complement(2213777..2214721) 1 NC_004547.2 Similar to Yersinia pestis transcriptional regulatory protein ypo3310 or y0878 SWALL:AAM84462 (EMBL:AJ414156) (314 aa) fasta scores: E(): 6.9e-93, 82.16% id in 314 aa, and to Agrobacterium tumefaciens transcriptional regulator atu1904 or agr_c_3494 SWALL:Q8UE57 (EMBL:AE009144) (319 aa) fasta scores: E(): 1.3e-40, 40.19% id in 316 aa; transcriptional regulator 2214721 2883737 ECA1954 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_050049.1 2213777 R 218491 CDS YP_050050.1 50120883 2883726 2214906..2215211 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri hypothetical protein ycis ycis or b1279 or sf1283 SWALL:AAN42895 (EMBL:AE000226) (102 aa) fasta scores: E(): 7.4e-25, 75.78% id in 95 aa, and to Salmonella typhimurium, and Salmonella typhi inner membrane protein ycis or stm1709 or sty1342 SWALL:Q8XFS5 (EMBL:AE008776) (102 aa) fasta scores: E(): 4.1e-24, 71.71% id in 99 aa; hypothetical protein 2215211 2883726 ECA1955 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050050.1 2214906 D 218491 CDS YP_050051.1 50120884 2883727 2215224..2216393 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2225 or y2067 SWALL:Q8ZEE7 (EMBL:AJ414151) (389 aa) fasta scores: E(): 1.7e-119, 79.69% id in 389 aa, and to Shigella flexneri heat shock protein ycim or sf1284 SWALL:AAN42896 (EMBL:AE015155) (389 aa) fasta scores: E(): 4.9e-117, 77.31% id in 388 aa; tetratricopeptide repeat protein 2216393 2883727 ECA1956 Pectobacterium atrosepticum SCRI1043 tetratricopeptide repeat protein YP_050051.1 2215224 D 218491 CDS YP_050052.1 50120885 2882678 2216576..2217319 1 NC_004547.2 OMP decarboxylase; OMPDCase; OMPdecase; type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 2217319 pyrF 2882678 pyrF Pectobacterium atrosepticum SCRI1043 orotidine 5'-phosphate decarboxylase YP_050052.1 2216576 D 218491 CDS YP_050053.1 50120886 2883728 2217316..2217645 1 NC_004547.2 involved in start site selection during the initiation of translation; translation initiation factor Sui1 2217645 2883728 ECA1958 Pectobacterium atrosepticum SCRI1043 translation initiation factor Sui1 YP_050053.1 2217316 D 218491 CDS YP_050054.1 50120887 2882724 complement(2217826..2218041) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri osmotically inducible lipoprotein B precursor OsmB or b1283 or c1753 or z2523 or ecs1856 or sf1287 SWALL:OSMB_ECOLI (SWALL:P17873) (72 aa) fasta scores: E(): 5.7e-13, 73.52% id in 68 aa; lipoprotein 2218041 osmB 2882724 osmB Pectobacterium atrosepticum SCRI1043 lipoprotein YP_050054.1 2217826 R 218491 CDS YP_050055.1 50120888 2884161 2218378..2219073 1 NC_004547.2 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; L-ribulose-5-phosphate 4-epimerase 2219073 araD 2884161 araD Pectobacterium atrosepticum SCRI1043 L-ribulose-5-phosphate 4-epimerase YP_050055.1 2218378 D 218491 CDS YP_050056.1 50120889 2883774 complement(2219248..2221311) 1 NC_004547.2 Similar to Escherichia coli carbon starvation protein A CstA or b0598 SWALL:CSTA_ECOLI (SWALL:P15078) (701 aa) fasta scores: E(): 8.8e-164, 60.67% id in 684 aa; carbon starvation protein 2221311 cstA 2883774 cstA Pectobacterium atrosepticum SCRI1043 carbon starvation protein YP_050056.1 2219248 R 218491 CDS YP_050057.1 50120890 2883709 complement(2221689..2222606) 1 NC_004547.2 Similar to Listeria monocytogenes hypothetical protein Lmo0640 SWALL:Q8Y993 (EMBL:AL591976) (305 aa) fasta scores: E(): 4.4e-86, 74.42% id in 305 aa, and to Clostridium acetobutylicum aldo/keto reductase family enzyme cac3378 SWALL:Q97DU3 (EMBL:AE007834) (306 aa) fasta scores: E(): 7.6e-74, 62.86% id in 307 aa; oxidoreductase 2222606 2883709 ECA1962 Pectobacterium atrosepticum SCRI1043 oxidoreductase YP_050057.1 2221689 R 218491 CDS YP_050058.1 50120891 2885046 complement(2222766..2224700) 1 NC_004547.2 Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction; exoribonuclease II 2224700 rnb 2885046 rnb Pectobacterium atrosepticum SCRI1043 exoribonuclease II YP_050058.1 2222766 R 218491 CDS YP_050059.1 50120892 2883710 complement(2225106..2227418) 1 NC_004547.2 Similar to Alcaligenes eutrophus CbbbC SWALL:P72261 (EMBL:U60056) (757 aa) fasta scores: E(): 2.9e-139, 50.66% id in 758 aa, and to Pseudomonas putida molybdopterin oxidoreductase, alpha subunit pp0256 SWALL:AAN65887 (EMBL:AE016775) (781 aa) fasta scores: E(): 3e-184, 60% id in 760 aa; molybdopterin oxidoreductase 2227418 2883710 ECA1964 Pectobacterium atrosepticum SCRI1043 molybdopterin oxidoreductase YP_050059.1 2225106 R 218491 CDS YP_050060.1 50120893 2883711 2227588..2228490 1 NC_004547.2 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa5179 SWALL:Q9HU10 (EMBL:AE004931) (293 aa) fasta scores: E(): 4.3e-38, 41.33% id in 300 aa, and to Pseudomonas putida transcriptional regulator, LysR family pp4601 SWALL:AAN70174 (EMBL:AE016791) (295 aa) fasta scores: E(): 2e-34, 37.91% id in 298 aa; LysR family transcriptional regulator 2228490 2883711 ECA1965 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_050060.1 2227588 D 218491 CDS YP_050061.1 50120894 2883712 complement(2228481..2229551) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri transcriptional repressor CytR or b3934 or c4887 or z5481 or ecs4861 or sf4012 SWALL:CYTR_ECOLI (SWALL:P06964) (341 aa) fasta scores: E(): 2.1e-16, 25.88% id in 340 aa, and to Yersinia pestis LacI-family regulatory protein ypo0846 or y3231 SWALL:Q8ZHP4 (EMBL:AJ414145) (360 aa) fasta scores: E(): 2.3e-80, 56.66% id in 360 aa; transcriptional repressor 2229551 2883712 ECA1966 Pectobacterium atrosepticum SCRI1043 transcriptional repressor YP_050061.1 2228481 R 218491 CDS YP_050062.1 50120895 2883668 2229872..2231182 1 NC_004547.2 Similar to Erwinia chrysanthemi ExuT SWALL:P94774 (EMBL:U86689) (345 aa) fasta scores: E(): 2.6e-53, 42.85% id in 329 aa, and to Yersinia pestis sugar transporter ypo0847 or ExuT or y3232 SWALL:AAM86782 (EMBL:AJ414145) (435 aa) fasta scores: E(): 1.2e-142, 77.03% id in 431 aa. Also similar to ECA0644 (44.039% id in 411 aa overlap); hexuronate transporter 2231182 2883668 ECA1967 Pectobacterium atrosepticum SCRI1043 hexuronate transporter YP_050062.1 2229872 D 218491 CDS YP_050063.1 50120896 2883669 2231341..2233707 1 NC_004547.2 Similar to Yersinia pestis glucosidase ypo0848 or y3233 SWALL:Q8ZHP2 (EMBL:AJ414145) (792 aa) fasta scores: E(): 0, 76.27% id in 784 aa, and to Bacillus thermoamyloliquefaciens alpha-glucosidase II SWALL:AGL2_BACTQ (SWALL:Q9F234) (787 aa) fasta scores: E(): 1.5e-66, 27.93% id in 784 aa; glycosyl hydrolase 2233707 2883669 ECA1968 Pectobacterium atrosepticum SCRI1043 glycosyl hydrolase YP_050063.1 2231341 D 218491 CDS YP_050064.1 50120897 2883670 2234056..2236932 1 NC_004547.2 The C-terminal region of this CDS is similar to Shewanella frigidimarina fumarate reductase flavoprotein subunit precursor FccA or Fcc3 SWALL:FRDA_SHEFR (SWALL:Q02469) (596 aa) fasta scores: E(): 2.7e-64, 43.72% id in 462 aa, and to Staphylococcus epidermidis NADH-dependent flavin oxidoreductase se0195 SWALL:AAO03792 (EMBL:AE016744) (1005 aa) fasta scores: E(): 2.2e-69, 38.82% id in 1007 aa; NADH:flavin oxidoreductase 2236932 2883670 ECA1969 Pectobacterium atrosepticum SCRI1043 NADH:flavin oxidoreductase YP_050064.1 2234056 D 218491 CDS YP_050065.1 50120898 2883645 2237016..2237987 1 NC_004547.2 Similar to Clostridium perfringens thiamin biosynthesis lipoprotein ApbA or cpe2227 SWALL:Q8XI94 (EMBL:AP003193) (342 aa) fasta scores: E(): 6.1e-46, 41.47% id in 311 aa, and to Thermoanaerobacter tengcongensis membrane-associated lipoprotein involved in thiamine biosynthesis apbe or tte2482 SWALL:Q8R7D3 (EMBL:AE013189) (341 aa) fasta scores: E(): 2.4e-42, 44.25% id in 287 aa; thiamine biosynthesis protein 2237987 2883645 ECA1970 Pectobacterium atrosepticum SCRI1043 thiamine biosynthesis protein YP_050065.1 2237016 D 218491 CDS YP_050066.1 50120899 2882964 complement(2238073..2238627) 1 NC_004547.2 Similar to Ralstonia solanacearum AidA SWALL:O30918 (EMBL:AF021840) (167 aa) fasta scores: E(): 2.2e-11, 32.75% id in 174 aa. Expression of aidA in R. solanacearum is acyl-homoserine lactones dependent.; hypothetical protein 2238627 aidA 2882964 aidA Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050066.1 2238073 R 218491 CDS YP_050067.1 50120900 2883889 complement(2239125..2239913) 1 NC_004547.2 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 2239913 fabI 2883889 fabI Pectobacterium atrosepticum SCRI1043 enoyl-ACP reductase YP_050067.1 2239125 R 218491 CDS YP_050068.1 50120901 2884430 complement(2240066..2240881) 1 NC_004547.2 Similar to Erwinia chrysanthemi SapF protein SWALL:O86191 (EMBL:AJ222649) (269 aa) fasta scores: E(): 5.2e-80, 88.8% id in 268 aa, and to Salmonella typhimurium peptide transport system ATP-binding protein SapF or stm1696 SWALL:SAPF_SALTY (SWALL:P36638) (268 aa) fasta scores: E(): 9e-75, 80.89% id in 267 aa; peptide transport system ATP-binding protein 2240881 sapF 2884430 sapF Pectobacterium atrosepticum SCRI1043 peptide transport system ATP-binding protein YP_050068.1 2240066 R 218491 CDS YP_050069.1 50120902 2884429 complement(2240881..2241873) 1 NC_004547.2 Similar to Erwinia chrysanthemi SapD protein SWALL:O86190 (EMBL:AJ222649) (330 aa) fasta scores: E(): 1.6e-113, 86.32% id in 329 aa, and to Salmonella typhimurium peptide transport system ATP-binding protein SapD or stm1695 SWALL:SAPD_SALTY (SWALL:P36636) (330 aa) fasta scores: E(): 6.3e-111, 85.36% id in 328 aa; peptide transport system ATP-binding protein 2241873 sapD 2884429 sapD Pectobacterium atrosepticum SCRI1043 peptide transport system ATP-binding protein YP_050069.1 2240881 R 218491 CDS YP_050070.1 50120903 2884435 complement(2241890..2242780) 1 NC_004547.2 Similar to Erwinia chrysanthemi SapC protein SWALL:O86189 (EMBL:AJ222649) (296 aa) fasta scores: E(): 1.5e-89, 78.37% id in 296 aa, and to Salmonella typhimurium, and Salmonella typhi peptide transport system permease protein SapC or stm1694 or sty1357 SWALL:SAPC_SALTY (SWALL:P36669) (296 aa) fasta scores: E(): 2.5e-87, 75.33% id in 296 aa; peptide transport system permease 2242780 sapC 2884435 sapC Pectobacterium atrosepticum SCRI1043 peptide transport system permease YP_050070.1 2241890 R 218491 CDS YP_050071.1 50120904 2884434 complement(2242767..2243732) 1 NC_004547.2 Similar to Erwinia chrysanthemi SapB protein SWALL:O86188 (EMBL:AJ222649) (313 aa) fasta scores: E(): 2.2e-84, 71.65% id in 321 aa, and to Salmonella typhimurium, and Salmonella typhi peptide transport system permease protein SapB or stm1693 or sty1368 SWALL:SAPB_SALTY (SWALL:P36668) (321 aa) fasta scores: E(): 9.2e-94, 73.2% id in 321 aa; peptide transport system permease 2243732 sapB 2884434 sapB Pectobacterium atrosepticum SCRI1043 peptide transport system permease YP_050071.1 2242767 R 218491 CDS YP_050072.1 50120905 2884433 complement(2243729..2245417) 1 NC_004547.2 Similar to Erwinia chrysanthemi SapA protein SWALL:O86187 (EMBL:AJ222649) (540 aa) fasta scores: E(): 1.5e-178, 80.92% id in 540 aa, and to Salmonella typhimurium peptide transport periplasmic protein SapA precursor or stm1692 SWALL:SAPA_SALTY (SWALL:P36634) (549 aa) fasta scores: E(): 6.1e-161, 71.4% id in 535 aa; peptide transport periplasmic protein 2245417 sapA 2884433 sapA Pectobacterium atrosepticum SCRI1043 peptide transport periplasmic protein YP_050072.1 2243729 R 218491 CDS YP_050073.1 50120906 2883646 complement(2245529..2246458) 1 NC_004547.2 Similar to Rhizobium loti probable transcriptional regulator mll2472 SWALL:Q98IC0 (EMBL:AP002999) (298 aa) fasta scores: E(): 3.8e-61, 58.9% id in 292 aa, and to Xanthomonas campestris transcriptional regulator xcc4174 SWALL:Q8P3A2 (EMBL:AE012543) (303 aa) fasta scores: E(): 2.1e-60, 57.14% id in 294 aa; LysR family transcriptional regulator 2246458 2883646 ECA1978 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_050073.1 2245529 R 218491 CDS YP_050074.1 50120907 2883647 2246565..2247398 1 NC_004547.2 Similar to Rhizobium loti short-chain oxidoreductase mlr2473 SWALL:Q98IB9 (EMBL:AP002999) (276 aa) fasta scores: E(): 4.8e-55, 57.87% id in 273 aa, and to Xanthomonas campestris short chain oxidoreductase xcc4175 SWALL:Q8P3A1 (EMBL:AE012543) (290 aa) fasta scores: E(): 3.6e-51, 54.44% id in 270 aa; short chain dehydrogenase 2247398 2883647 ECA1979 Pectobacterium atrosepticum SCRI1043 short chain dehydrogenase YP_050074.1 2246565 D 218491 CDS YP_050075.1 50120908 2882541 2247874..2249394 1 NC_004547.2 Similar to Erwinia carotovora endoglucanase V precursor CelV SWALL:GUNV_ERWCA (SWALL:Q47096) (505 aa) fasta scores: E(): 9.2e-190, 94.65% id in 505 aa; endoglucanase V 2249394 celV 2882541 celV Pectobacterium atrosepticum SCRI1043 endoglucanase V YP_050075.1 2247874 D 218491 CDS YP_050076.1 50120909 2882468 complement(2249463..2250452) 1 NC_004547.2 transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor; phage shock protein operon transcriptional activator 2250452 pspF 2882468 pspF Pectobacterium atrosepticum SCRI1043 phage shock protein operon transcriptional activator YP_050076.1 2249463 R 218491 CDS YP_050077.1 50120910 2881897 2250678..2251343 1 NC_004547.2 involved in maintaining membrane potential under membrane stress conditions; also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF; phage shock protein PspA 2251343 pspA 2881897 pspA Pectobacterium atrosepticum SCRI1043 phage shock protein PspA YP_050077.1 2250678 D 218491 CDS YP_050078.1 50120911 2881898 2251445..2251669 1 NC_004547.2 acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding; phage shock protein B 2251669 pspB 2881898 pspB Pectobacterium atrosepticum SCRI1043 phage shock protein B YP_050078.1 2251445 D 218491 CDS YP_050079.1 50120912 2881899 2251669..2252034 1 NC_004547.2 with PsbB forms toxin/antitoxin pair; activates the psp operon in response to phage infection, exposure to ethanol or osmotic shock; DNA-binding transcriptional activator PspC 2252034 pspC 2881899 pspC Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional activator PspC YP_050079.1 2251669 D 218491 CDS YP_050080.1 50120913 2883639 2252210..2253607 1 NC_004547.2 Similar to Yersinia enterocolitica hypothetical 52.6 kDa protein ycjX SWALL:Q9F4H0 (EMBL:AY008264) (465 aa) fasta scores: E(): 4.4e-166, 81.93% id in 465 aa, and to Escherichia coli hypothetical protein ycjx or b1321 SWALL:YCJX_ECOLI (SWALL:P76046) (465 aa) fasta scores: E(): 1.1e-154, 76.34% id in 465 aa; hypothetical protein 2253607 2883639 ECA1986 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050080.1 2252210 D 218491 CDS YP_050081.1 50120914 2883640 2253604..2254647 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 hypothetical protein ycjf or b1322 or c1794 SWALL:YCJF_ECOLI (SWALL:P45525) (353 aa) fasta scores: E(): 1.2e-102, 75.28% id in 348 aa, and to Shigella flexneri orf, conserved hypothetical protein ycjf or sf1328 SWALL:AAN42934 (EMBL:AE015159) (353 aa) fasta scores: E(): 1.5e-102, 75% id in 348 aa; hypothetical protein 2254647 2883640 ECA1987 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050081.1 2253604 D 218491 CDS YP_050082.1 50120915 2883641 2254805..2256349 1 NC_004547.2 Similar to Deinococcus radiodurans arge/dape/acy1 family protein dr2025 SWALL:Q9RSU7 (EMBL:AE002039) (459 aa) fasta scores: E(): 3.4e-22, 29.93% id in 471 aa, and to Oceanobacillus iheyensis hypothetical conserved protein ob1111 SWALL:BAC13067 (EMBL:AP004596) (453 aa) fasta scores: E(): 8.2e-21, 29.91% id in 478 aa; peptidase 2256349 2883641 ECA1988 Pectobacterium atrosepticum SCRI1043 peptidase YP_050082.1 2254805 D 218491 CDS YP_050083.1 50120916 2884220 2256486..2258054 1 NC_004547.2 regulates genes involved in the biosynthesis and transport of aromatic amino acids; DNA-binding transcriptional regulator TyrR 2258054 tyrR 2884220 tyrR Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional regulator TyrR YP_050083.1 2256486 D 218491 CDS YP_050084.1 50120917 2884253 complement(2258122..2258625) 1 NC_004547.2 antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; thiol peroxidase 2258625 tpx 2884253 tpx Pectobacterium atrosepticum SCRI1043 thiol peroxidase YP_050084.1 2258122 R 218491 CDS YP_050085.1 50120918 2883633 complement(2258705..2259424) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2340 or y1992 SWALL:Q8ZE44 (EMBL:AJ414152) (256 aa) fasta scores: E(): 5.7e-69, 73.93% id in 234 aa, and to Shigella dysenteriae YcjI SWALL:Q9LA26 (EMBL:AF153317) (262 aa) fasta scores: E(): 1.4e-67, 70.08% id in 234 aa; murein peptide amidase A 2259424 2883633 ECA1991 Pectobacterium atrosepticum SCRI1043 murein peptide amidase A YP_050085.1 2258705 R 218491 CDS YP_050086.1 50120919 2881696 2259590..2261206 1 NC_004547.2 Similar to Escherichia coli periplasmic murein peptide-binding protein precursor MppA or b1329 SWALL:MPPA_ECOLI (SWALL:P77348) (537 aa) fasta scores: E(): 1.5e-156, 72.11% id in 538 aa; periplasmic murein peptide-binding protein 2261206 mppA 2881696 mppA Pectobacterium atrosepticum SCRI1043 periplasmic murein peptide-binding protein YP_050086.1 2259590 D 218491 CDS YP_050087.1 50120920 2882472 2261346..2262329 1 NC_004547.2 Similar to Salmonella typhimurium zinc transport protein ZntB or stm1656 SWALL:Q9EYX5 (EMBL:AF308568) (327 aa) fasta scores: E(): 2.3e-86, 63.3% id in 327 aa, and to Yersinia pestis hypothetical protein y1994 SWALL:AAM85560 (EMBL:AE013802) (337 aa) fasta scores: E(): 8.6e-94, 72.36% id in 322 aa; zinc transporter 2262329 zntB 2882472 zntB Pectobacterium atrosepticum SCRI1043 zinc transporter YP_050087.1 2261346 D 218491 CDS YP_050088.1 50120921 2883634 2262768..2262941 1 NC_004547.2 no significant database matches; hypothetical protein 2262941 2883634 ECA1994 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050088.1 2262768 D 218491 CDS YP_050089.1 50120922 2883635 complement(2263058..2263993) 1 NC_004547.2 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; C32 tRNA thiolase 2263993 2883635 ECA1995 Pectobacterium atrosepticum SCRI1043 C32 tRNA thiolase YP_050089.1 2263058 R 218491 CDS YP_050090.1 50120923 2884954 2264211..2264807 1 NC_004547.2 Similar to Escherichia coli colicin E5 Col SWALL:CEA5_ECOLI (SWALL:P18000) (180 aa) fasta scores: E(): 4.3e-29, 63.5% id in 137 aa, and to Pseudomonas aeruginosa pyocin protein pa3866 SWALL:Q9HXE0 (EMBL:AE004804) (764 aa) fasta scores: E(): 5e-13, 58.06% id in 93 aa; colicin 2264807 col 2884954 col Pectobacterium atrosepticum SCRI1043 colicin YP_050090.1 2264211 D 218491 CDS YP_050091.1 50120924 2881755 2264869..2265129 1 NC_004547.2 Similar to Escherichia coli colicin E5 Immunity protein Imm SWALL:IMM5_ECOLI (SWALL:P13476) (83 aa) fasta scores: E(): 2.5e-13, 58.53% id in 82 aa; colicin immunity protein 2265129 imm 2881755 imm Pectobacterium atrosepticum SCRI1043 colicin immunity protein YP_050091.1 2264869 D 218491 CDS YP_050092.1 50120925 2883582 complement(2265486..2265758) 1 NC_004547.2 Similar to Vibrio cholerae hypothetical protein Vca0935 SWALL:Q9KL14 (EMBL:AE004420) (118 aa) fasta scores: E(): 1.3e-08, 37.5% id in 88 aa, and to Streptococcus pneumoniae conserved hypothetical protein spr0927 SWALL:AAK99731 (EMBL:AE008465) (156 aa) fasta scores: E(): 7, 32.53% id in 83 aa; hypothetical protein 2265758 2883582 ECA1998 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050092.1 2265486 R 218491 CDS YP_050093.1 50120926 2883583 2266317..2266607 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 hypothetical protein ydbj precursor ydbj or b1378.1 or c1825 SWALL:YDBJ_ECOLI (SWALL:P52646) (88 aa) fasta scores: E(): 3e-09, 43.61% id in 94 aa, and to Yersinia pestis lipoprotein ypo2331 SWALL:Q8ZE53 (EMBL:AJ414152) (113 aa) fasta scores: E(): 1.6e-06, 34.51% id in 113 aa; lipoprotein 2266607 2883583 ECA1999 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_050093.1 2266317 D 218491 CDS YP_050094.1 50120927 2883631 complement(2266640..2267632) 1 NC_004547.2 Catalyzes the reduction of sulfopyruvate to (R)-sulfolactate much more efficiently than the reverse reaction. Also catalyzes the reduction of oxaloacetate, alpha-ketoglutarate, and to a much lower extent, KHTCA, but not pyruvate. Involved in the biosynthes; D-lactate dehydrogenase 2267632 ldhA 2883631 ldhA Pectobacterium atrosepticum SCRI1043 D-lactate dehydrogenase YP_050094.1 2266640 R 218491 CDS YP_050095.1 50120928 2883245 complement(2267752..2269305) 1 NC_004547.2 Similar to Escherichia coli aerotaxis receptor Aer or Air or b3072 SWALL:AER_ECOLI (SWALL:P50466) (506 aa) fasta scores: E(): 9.2e-69, 40.31% id in 501 aa. Also similar to ECA2002 (64.808% id in 520 aa overlap); aerotaxis receptor 2269305 aer1 2883245 aer1 Pectobacterium atrosepticum SCRI1043 aerotaxis receptor YP_050095.1 2267752 R 218491 CDS YP_050096.1 50120929 2883246 complement(2269650..2271203) 1 NC_004547.2 Similar to Escherichia coli aerotaxis receptor Aer or Air or b3072 SWALL:AER_ECOLI (SWALL:P50466) (506 aa) fasta scores: E(): 1.7e-71, 41.82% id in 514 aa. Also similar to ECA2001 (64.808% id in 520 aa overlap); aerotaxis receptor 2271203 aer2 2883246 aer2 Pectobacterium atrosepticum SCRI1043 aerotaxis receptor YP_050096.1 2269650 R 218491 CDS YP_050097.1 50120930 2883584 2271577..2274168 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein y2005 SWALL:AAM85571 (EMBL:AE013803) (898 aa) fasta scores: E(): 1e-188, 52.6% id in 865 aa, and to Escherichia coli O6 hypothetical protein ydbh or c1828 SWALL:AAN80292 (EMBL:AE016760) (879 aa) fasta scores: E(): 2.9e-148, 44.01% id in 861 aa; hypothetical protein 2274168 2883584 ECA2003 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050097.1 2271577 D 218491 CDS YP_050098.1 50120931 2883585 2274184..2274414 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri hypothetical protein ynbe or b1382 or c1829 or sf1816 SWALL:YNBE_ECOLI (SWALL:P76075) (61 aa) fasta scores: E(): 2.7e-10, 73.21% id in 56 aa, and to Salmonella typhimurium, and Salmonella typhi outer membrane lipoprotein ynbe or stm1645 or sty1424 SWALL:Q8XEM6 (EMBL:AE008772) (63 aa) fasta scores: E(): 1.5e-09, 60.65% id in 61 aa; lipoprotein 2274414 2883585 ECA2004 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_050098.1 2274184 D 218491 CDS YP_050099.1 50120932 2884760 complement(2274685..2275290) 1 NC_004547.2 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; azoreductase 2275290 acpD 2884760 acpD Pectobacterium atrosepticum SCRI1043 azoreductase YP_050099.1 2274685 R 218491 CDS YP_050100.2 161501877 2883520 2275654..2279496 1 NC_004547.2 involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; ATP-dependent RNA helicase HrpA 2279496 2883520 ECA2006 Pectobacterium atrosepticum SCRI1043 ATP-dependent RNA helicase HrpA YP_050100.2 2275654 D 218491 CDS YP_050101.1 50120934 2883521 complement(2279511..2280350) 1 NC_004547.2 Similar to Pseudomonas aeruginosa staphylolytic protease preproenzyme LasA pa1872 SWALL:P72166 (EMBL:U68175) (263 aa) fasta scores: E(): 1.4e-21, 43.6% id in 266 aa, and to Xanthomonas axonopodis hypothetical protein Xac0112 SWALL:Q8PR54 (EMBL:AE011634) (263 aa) fasta scores: E(): 5.6e-20, 43.89% id in 262 aa; protease 2280350 2883521 ECA2007 Pectobacterium atrosepticum SCRI1043 protease YP_050101.1 2279511 R 218491 CDS YP_050102.1 50120935 2883522 complement(2280396..2282174) 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein Pa2567 SWALL:Q9I0R8 (EMBL:AE004685) (587 aa) fasta scores: E(): 1.7e-61, 32.99% id in 582 aa, and to Xanthomonas campestris hypothetical protein Xcc1777 SWALL:Q8P9S1 (EMBL:AE012279) (618 aa) fasta scores: E(): 2e-57, 32.88% id in 590 aa; signaling protein 2282174 2883522 ECA2008 Pectobacterium atrosepticum SCRI1043 signaling protein YP_050102.1 2280396 R 218491 CDS YP_050103.1 50120936 2883517 complement(2282647..2283504) 1 NC_004547.2 Similar to Shigella flexneri orf, conserved hypothetical protein sf1619 SWALL:AAN43202 (EMBL:AE015183) (273 aa) fasta scores: E(): 1.1e-59, 57.35% id in 272 aa, and to Escherichia coli protease ydgd precursor ydgd or b1598 SWALL:YDGD_ECOLI (SWALL:P76176) (273 aa) fasta scores: E(): 1.8e-59, 57.35% id in 272 aa; exported protease 2283504 2883517 ECA2009 Pectobacterium atrosepticum SCRI1043 exported protease YP_050103.1 2282647 R 218491 CDS YP_050104.1 50120937 2883518 complement(2283756..2284052) 1 NC_004547.2 Similar to Escherichia coli O157:H7 hypothetical protein z1678 or ecs1422 SWALL:Q8X5A9 (EMBL:AE005315) (103 aa) fasta scores: E(): 0.0022, 28.12% id in 96 aa, and to Shigella flexneri orf, conserved hypothetical protein sf1040 SWALL:AAN42662 (EMBL:AE015132) (103 aa) fasta scores: E(): 0.0031, 27.08% id in 96 aa; hypothetical protein 2284052 2883518 ECA2010 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050104.1 2283756 R 218491 CDS YP_050105.2 161501876 2882889 complement(2284549..2284911) 1 NC_004547.2 required for growth and survival under moderately acid conditions; acid shock protein 2284911 asr 2882889 asr Pectobacterium atrosepticum SCRI1043 acid shock protein YP_050105.2 2284549 R 218491 CDS YP_050106.1 50120939 2884448 complement(2285092..2286405) 1 NC_004547.2 Similar to Escherichia coli sensor protein RstB or UspT or b1609 SWALL:RSTB_ECOLI (SWALL:P18392) (433 aa) fasta scores: E(): 3.4e-113, 66.5% id in 424 aa; sensor protein RstB 2286405 rstB 2884448 rstB Pectobacterium atrosepticum SCRI1043 sensor protein RstB YP_050106.1 2285092 R 218491 CDS YP_050107.1 50120940 2884447 complement(2286402..2287139) 1 NC_004547.2 response regulator in two-component regulatory system with RstB; DNA-binding transcriptional regulator RstA 2287139 rstA 2884447 rstA Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional regulator RstA YP_050107.1 2286402 R 218491 CDS YP_050108.1 50120941 2883519 2287361..2288560 1 NC_004547.2 Similar to Listeria monocytogenes hypothetical protein Lmo1135 SWALL:Q8Y7Y4 (EMBL:AL591978) (383 aa) fasta scores: E(): 0.00071, 21.26% id in 395 aa; hypothetical protein 2288560 2883519 ECA2014 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050108.1 2287361 D 218491 CDS YP_050109.1 50120942 2883497 2288706..2289281 1 NC_004547.2 Similar to Xanthomonas axonopodis hypothetical protein Xac3032 SWALL:Q8PI66 (EMBL:AE011945) (220 aa) fasta scores: E(): 3.7e-08, 25.78% id in 190 aa, and to Xylella fastidiosa hypothetical protein Xf1840 SWALL:Q9PCE1 (EMBL:AE004005) (237 aa) fasta scores: E(): 6.4e-13, 29.89% id in 194 aa; hypothetical protein 2289281 2883497 ECA2015 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050109.1 2288706 D 218491 CDS YP_050110.1 50120943 2883498 complement(2289333..2290136) 1 NC_004547.2 Similar to Rhizobium loti hypothetical protein Mlr7774 SWALL:Q984Z9 (EMBL:AP003012) (263 aa) fasta scores: E(): 7.7e-06, 25.4% id in 248 aa; hypothetical protein 2290136 2883498 ECA2016 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050110.1 2289333 R 218491 CDS YP_050111.1 50120944 2883499 complement(2290133..2290600) 1 NC_004547.2 Similar to Bradyrhizobium japonicum ECF sigma factor EcfA or bll6484 SWALL:BAC51749 (EMBL:AJ304855) (172 aa) fasta scores: E(): 2.1e-13, 36.66% id in 150 aa, and to Thiobacillus novellus RNA polymerase sigma factor SigE SWALL:Q9LA18 (EMBL:AF154565) (172 aa) fasta scores: E(): 1.8e-09, 34.26% id in 143 aa; RNA polymerase sigma factor 2290600 2883499 ECA2017 Pectobacterium atrosepticum SCRI1043 RNA polymerase sigma factor YP_050111.1 2290133 R 218491 CDS YP_050112.1 50120945 2883491 complement(2290679..2291401) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical oxidoreductase ydgb or b1606 or z2606 or ecs2312 SWALL:YDGB_ECOLI (SWALL:P52109) (240 aa) fasta scores: E(): 8.5e-56, 66.09% id in 233 aa, and to Pseudomonas aeruginosa probable short-chain dehydrogenase pa3437 SWALL:Q9HYG9 (EMBL:AE004764) (234 aa) fasta scores: E(): 7.6e-36, 47.08% id in 240 aa; short chain dehydrogenase 2291401 2883491 ECA2018 Pectobacterium atrosepticum SCRI1043 short chain dehydrogenase YP_050112.1 2290679 R 218491 CDS YP_050113.1 50120946 2883492 2291856..2294414 1 NC_004547.2 no significant database matches; hypothetical protein 2294414 2883492 ECA2019 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050113.1 2291856 D 218491 CDS YP_050114.1 50120947 2883493 2294424..2297000 1 NC_004547.2 no significant database matches; hypothetical protein 2297000 2883493 ECA2020 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050114.1 2294424 D 218491 CDS YP_050115.1 50120948 2883428 complement(2297113..2298807) 1 NC_004547.2 role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport; sulfate transporter YchM 2298807 2883428 ECA2021 Pectobacterium atrosepticum SCRI1043 sulfate transporter YchM YP_050115.1 2297113 R 218491 CDS YP_050116.1 50120949 2884596 complement(2298971..2300071) 1 NC_004547.2 Similar to Escherichia coli calcium/proton antiporter ChaA or b1216 SWALL:CHAA_ECOLI (SWALL:P31801) (366 aa) fasta scores: E(): 1.8e-109, 78.57% id in 364 aa; calcium/sodium:proton antiporter 2300071 chaA 2884596 chaA Pectobacterium atrosepticum SCRI1043 calcium/sodium:proton antiporter YP_050116.1 2298971 R 218491 CDS YP_050117.1 50120950 2883429 complement(2300086..2300208) 1 NC_004547.2 Similar to Paramecium primaurelia g surface antigen gene, 5' end SWALL:AAA29444 (EMBL:M11194) (48 aa) fasta scores: E(): 7.5, 37.2% id in 43 aa; surface antigen protein 2300208 2883429 ECA2022A Pectobacterium atrosepticum SCRI1043 surface antigen protein YP_050117.1 2300086 R 218491 CDS YP_050118.1 50120951 2883430 complement(2300401..2301204) 1 NC_004547.2 Similar to Vibrio vulnificus vulnibactin utilization protein ViuB or vv20837 SWALL:AAO07760 (EMBL:U32676) (271 aa) fasta scores: E(): 1.2e-26, 34.48% id in 261 aa, and to Stigmatella aurantiaca MxcB mxcB SWALL:Q9F641 (EMBL:AF299336) (270 aa) fasta scores: E(): 2.1e-21, 33.84% id in 260 aa; siderophore-interacting protein 2301204 2883430 ECA2023 Pectobacterium atrosepticum SCRI1043 siderophore-interacting protein YP_050118.1 2300401 R 218491 CDS YP_050119.1 50120952 2883431 2301475..2301606 1 NC_004547.2 Doubtful CDS. No significant database matches; hypothetical protein 2301606 2883431 ECA2024 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050119.1 2301475 D 218491 CDS YP_050120.1 50120953 2884597 2301922..2302608 1 NC_004547.2 Similar to Escherichia coli cation transport protein ChaC or b1218 SWALL:CHAC_ECOLI (SWALL:P39163) (231 aa) fasta scores: E(): 3.3e-55, 60.18% id in 216 aa; cation transport protein 2302608 chaC 2884597 chaC Pectobacterium atrosepticum SCRI1043 cation transport protein YP_050120.1 2301922 D 218491 CDS YP_050121.1 50120954 2883425 complement(2302683..2303732) 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein Pa4390 SWALL:Q9HW14 (EMBL:AE004854) (335 aa) fasta scores: E(): 2.8e-59, 43.23% id in 340 aa, and to Pseudomonas putida conserved hypothetical protein pp1357 SWALL:AAN66980 (EMBL:AE016779) (375 aa) fasta scores: E(): 6.3e-60, 44.97% id in 338 aa; hypothetical protein 2303732 2883425 ECA2026 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050121.1 2302683 R 218491 CDS YP_050122.1 50120955 2883426 complement(2304023..2305297) 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein Pa4338 SWALL:Q9HW63 (EMBL:AE004850) (426 aa) fasta scores: E(): 4.1e-97, 57.42% id in 411 aa, and to Bacteroides thetaiotaomicron acyltransferase bt1546 SWALL:AAO76653 (EMBL:AE016932) (335 aa) fasta scores: E(): 2.4e-05, 28.27% id in 237 aa; acyltransferase 2305297 2883426 ECA2027 Pectobacterium atrosepticum SCRI1043 acyltransferase YP_050122.1 2304023 R 218491 CDS YP_050123.1 50120956 2883992 complement(2305560..2306210) 1 NC_004547.2 two-component response regulator NarL; phosphorylated by NarQ; activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase; transcriptional regulator NarL 2306210 narL 2883992 narL Pectobacterium atrosepticum SCRI1043 transcriptional regulator NarL YP_050123.1 2305560 R 218491 CDS YP_050124.1 50120957 2883598 complement(2306203..2308011) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri nitrate/nitrite sensor protein NarX or NarR or b1222 or z1998 or ecs1727 or sf1225 SWALL:NARX_ECOLI (SWALL:P10956) (598 aa) fasta scores: E(): 1.5e-115, 54.06% id in 603 aa; nitrate/nitrite sensor protein NarX 2308011 narX 2883598 narX Pectobacterium atrosepticum SCRI1043 nitrate/nitrite sensor protein NarX YP_050124.1 2306203 R 218491 CDS YP_050125.1 50120958 2883991 2308348..2309736 1 NC_004547.2 Similar to Escherichia coli nitrite extrusion protein 1 NarK or b1223 SWALL:NARK_ECOLI (SWALL:P10903) (463 aa) fasta scores: E(): 3.6e-131, 71.08% id in 460 aa; nitrite extrusion protein 2309736 narK 2883991 narK Pectobacterium atrosepticum SCRI1043 nitrite extrusion protein YP_050125.1 2308348 D 218491 CDS YP_050126.1 50120959 2883995 2310451..2314227 1 NC_004547.2 Similar to Escherichia coli respiratory nitrate reductase 1 alpha chain NarG or NarC or BisD or b1224 SWALL:NARG_ECOLI (SWALL:P09152) (1246 aa) fasta scores: E(): 0, 83.77% id in 1245 aa; respiratory nitrate reductase 1 subunit alpha 2314227 narG 2883995 narG Pectobacterium atrosepticum SCRI1043 respiratory nitrate reductase 1 subunit alpha YP_050126.1 2310451 D 218491 CDS YP_050127.1 50120960 2883996 2314227..2315807 1 NC_004547.2 Similar to Escherichia coli respiratory nitrate reductase 1 beta chain NarH or b1225 SWALL:NARH_ECOLI (SWALL:P11349) (512 aa) fasta scores: E(): 6.2e-178, 86.74% id in 513 aa; respiratory nitrate reductase 1 subunit beta 2315807 narH 2883996 narH Pectobacterium atrosepticum SCRI1043 respiratory nitrate reductase 1 subunit beta YP_050127.1 2314227 D 218491 CDS YP_050128.1 50120961 2883990 2315800..2316519 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 respiratory nitrate reductase 1 delta chain NarJ or b1226 or z2003 or ecs1731 SWALL:NARJ_ECOLI (SWALL:P11351) (236 aa) fasta scores: E(): 8.1e-56, 62.18% id in 238 aa; respiratory nitrate reductase 1 subunit delta 2316519 narJ 2883990 narJ Pectobacterium atrosepticum SCRI1043 respiratory nitrate reductase 1 subunit delta YP_050128.1 2315800 D 218491 CDS YP_050129.1 50120962 2883997 2316519..2317223 1 NC_004547.2 Similar to Escherichia coli respiratory nitrate reductase 1 gamma chain NarI or ChlI or b1227 SWALL:NARI_ECOLI (SWALL:P11350) (225 aa) fasta scores: E(): 5.6e-71, 77.67% id in 224 aa; respiratory nitrate reductase 1 subunit gamma 2317223 narI 2883997 narI Pectobacterium atrosepticum SCRI1043 respiratory nitrate reductase 1 subunit gamma YP_050129.1 2316519 D 218491 CDS YP_050130.1 50120963 2882176 complement(2317324..2318196) 1 NC_004547.2 Similar to Erwinia chrysanthemi PecM protein SWALL:PECM_ERWCH (SWALL:P42194) (297 aa) fasta scores: E(): 4e-39, 42.75% id in 276 aa; regulatory protein 2318196 pecM 2882176 pecM Pectobacterium atrosepticum SCRI1043 regulatory protein YP_050130.1 2317324 R 218491 CDS YP_050131.1 50120964 2882177 2318259..2318798 1 NC_004547.2 Similar to Erwinia chrysanthemi regulatory protein PecS SWALL:PECS_ERWCH (SWALL:P42195) (166 aa) fasta scores: E(): 5.5e-25, 48.76% id in 162 aa; regulatory protein 2318798 pecS 2882177 pecS Pectobacterium atrosepticum SCRI1043 regulatory protein YP_050131.1 2318259 D 218491 CDS YP_050132.1 50120965 2883427 2318802..2319278 1 NC_004547.2 Similar to Vibrio cholerae hypothetical protein Vca0330 SWALL:Q9KMK9 (EMBL:AE004371) (162 aa) fasta scores: E(): 1.2e-32, 56.57% id in 152 aa, and to Vibrio vulnificus predicted redox protein vv12348 SWALL:AAO10722 (EMBL:AE016804) (153 aa) fasta scores: E(): 1e-30, 53.94% id in 152 aa; OsmC-like protein 2319278 2883427 ECA2037 Pectobacterium atrosepticum SCRI1043 OsmC-like protein YP_050132.1 2318802 D 218491 CDS YP_050133.1 50120966 2883399 complement(2319365..2320507) 1 NC_004547.2 Similar to Agrobacterium tumefaciens hypothetical protein atu3948 or agr_l_1808 SWALL:Q8U8Z0 (EMBL:AE009325) (397 aa) fasta scores: E(): 2.3e-76, 51.96% id in 381 aa, and to Ralstonia solanacearum hypothetical protein rsc2709 or rs00013 SWALL:Q8XVW8 (EMBL:AL646071) (376 aa) fasta scores: E(): 1.1e-66, 48.8% id in 375 aa; hypothetical protein 2320507 2883399 ECA2038 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050133.1 2319365 R 218491 CDS YP_050134.1 50120967 2883400 complement(2320504..2321445) 1 NC_004547.2 Similar to Agrobacterium tumefaciens ornithine cyclodeaminase ArcB or Ocd SWALL:OCD_AGRT4 (SWALL:Q59701) (356 aa) fasta scores: E(): 5.7e-15, 27.42% id in 299 aa, and to Rhizobium meliloti ornithine cyclodeaminase 1 Ocd1 or rb0419 or smb20433 SWALL:OCD1_RHIME (SWALL:P58338) (329 aa) fasta scores: E(): 1.6e-25, 35.49% id in 324 aa; ornithine cyclodeaminase 2321445 2883400 ECA2039 Pectobacterium atrosepticum SCRI1043 ornithine cyclodeaminase YP_050134.1 2320504 R 218491 CDS YP_050135.1 50120968 2883401 complement(2321456..2322430) 1 NC_004547.2 catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine; serine/threonine dehydratase 2322430 2883401 ECA2040 Pectobacterium atrosepticum SCRI1043 serine/threonine dehydratase YP_050135.1 2321456 R 218491 CDS YP_050136.1 50120969 2883293 2322658..2323281 1 NC_004547.2 Similar to Bradyrhizobium japonicum Bll7235 protein SWALL:BAC52500 (EMBL:AP005961) (219 aa) fasta scores: E(): 5.9e-45, 62.5% id in 200 aa, and to Ralstonia solanacearum hypothetical protein rsp1517 or rs04794 SWALL:Q8XPW9 (EMBL:AL646085) (214 aa) fasta scores: E(): 4.9e-34, 49.01% id in 202 aa; DNA-binding protein 2323281 2883293 ECA2041 Pectobacterium atrosepticum SCRI1043 DNA-binding protein YP_050136.1 2322658 D 218491 CDS YP_050137.1 50120970 2883294 complement(2323396..2323677) 1 NC_004547.2 no significant database matches; hypothetical protein 2323677 2883294 ECA2042 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050137.1 2323396 R 218491 CDS YP_050138.1 50120971 2883295 complement(2323655..2324143) 1 NC_004547.2 no significant database matches; hypothetical protein 2324143 2883295 ECA2043 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050138.1 2323655 R 218491 CDS YP_050139.1 50120972 2883249 2324296..2324544 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein yeaq or b1795 or c2200 or z2837 or ecs2504 SWALL:YEAQ_ECOLI (SWALL:P76246) (82 aa) fasta scores: E(): 5.4e-25, 85.18% id in 81 aa, and to Salmonella enterica subsp. enterica serovar Typhi Ty2 membrane protein SWALL:AAO68813 (EMBL:AE016838) (82 aa) fasta scores: E(): 9.8e-25, 83.95% id in 81 aa; hypothetical protein 2324544 2883249 ECA2044 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050139.1 2324296 D 218491 CDS YP_050140.1 50120973 2883250 complement(2324722..2325750) 1 NC_004547.2 Similar to Streptomyces glaucescens StrP protein SWALL:Q54262 (EMBL:X78974) (358 aa) fasta scores: E(): 8.5e-33, 35.98% id in 339 aa, and to Agrobacterium tumefaciens udp-glucose 4-epimerase gale or atu4801 or agr_l_161 SWALL:Q8U6K6 (EMBL:AE009408) (378 aa) fasta scores: E(): 3.2e-31, 33.81% id in 343 aa; NAD dependent epimerase/dehydratase 2325750 2883250 ECA2045 Pectobacterium atrosepticum SCRI1043 NAD dependent epimerase/dehydratase YP_050140.1 2324722 R 218491 CDS YP_050141.1 50120974 2883251 complement(2325747..2328827) 1 NC_004547.2 Its N-terminal half is similar to several aminotransferases including Escherichia coli VioA SWALL:Q9XCW4 (EMBL:AF125322) (371 aa) fasta scores: E(): 1.6e-29, 32.31% id in 359 aa, and to Streptomyces globisporus amino transferase SWALL:AAL06659 (EMBL:AY048670) (410 aa) fasta scores: E(): 9.5e-29, 32.32% id in 396 aa. Its C-terminal half is similar to many chitin synthases such as Saprolegnia monoica chitin synthase chS SWALL:CHS_SAPMO (SWALL:P48017) (886 aa) fasta scores: E(): 6.2e-20, 24% id in 525 aa, and to Emericella nidulans chitin synthase a chsa or chs2 SWALL:CHSA_EMENI (SWALL:P30584) (1013 aa) fasta scores: E(): 5.3e-19, 24.18% id in 550 aa; Similar to Saprolegnia monoica chitin synthase chS SWALL:CHS_SAPMO (SWALL:P48017) (886 aa) fasta scores: E(): 6.2e-20, 24% id in 525 aa, and to Emericella nidulans chitin synthase a chsa or chs2 SWALL:CHSA_EMENI (SWALL:P30584) (1013 aa) fasta scores: E(): 5.3e-19, 24.18% id in 550 aa; bifunctional enzyme including aminotransferase and chitin synthase 2328827 2883251 ECA2046 Pectobacterium atrosepticum SCRI1043 bifunctional enzyme including aminotransferase and chitin synthase YP_050141.1 2325747 R 218491 CDS YP_050142.1 50120975 2883149 complement(2328861..2330060) 1 NC_004547.2 Similar to Ralstonia solanacearum hypothetical protein rsc1651 or rs04028 SWALL:Q8XYV5 (EMBL:AL646065) (394 aa) fasta scores: E(): 5.6e-36, 34.18% id in 392 aa, and to Caulobacter crescentus hypothetical protein Cc1979 SWALL:Q9A6V4 (EMBL:AE005871) (407 aa) fasta scores: E(): 1.3e-16, 25.77% id in 388 aa; hypothetical protein 2330060 2883149 ECA2047 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050142.1 2328861 R 218491 CDS YP_050143.1 50120976 2883150 complement(2330077..2332041) 1 NC_004547.2 Similar to Ralstonia solanacearum probable signal peptide protein rsc1650 or rs04027 SWALL:Q8XYV6 (EMBL:AL646065) (538 aa) fasta scores: E(): 1.4e-41, 34.04% id in 376 aa, and to Rhizobium loti hypothetical protein Mll5453 SWALL:Q98BS0 (EMBL:AP003006) (508 aa) fasta scores: E(): 1.6e-09, 25.22% id in 452 aa; hypothetical protein 2332041 2883150 ECA2048 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050143.1 2330077 R 218491 CDS YP_050144.1 50120977 2883151 complement(2332156..2332908) 1 NC_004547.2 Similar to Pseudomonas aeruginosa conserved hypothetical protein SWALL:AAN62203 (EMBL:AF440523) (248 aa) fasta scores: E(): 1.8e-29, 40.67% id in 236 aa, and to Xylella fastidiosa hypothetical protein Xf1787 SWALL:Q9PCJ2 (EMBL:AE004000) (251 aa) fasta scores: E(): 3.3e-29, 38% id in 250 aa; hypothetical protein 2332908 2883151 ECA2049 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050144.1 2332156 R 218491 CDS YP_050145.1 50120978 2883152 complement(2333299..2333916) 1 NC_004547.2 Similar to Vibrio vulnificus threonine efflux protein vv12697 SWALL:AAO11043 (EMBL:AE016806) (211 aa) fasta scores: E(): 2.3e-12, 30.73% id in 205 aa, and to Vibrio cholerae hypothetical protein Vc1421 SWALL:Q9KS40 (EMBL:AE004221) (212 aa) fasta scores: E(): 1.3e-09, 25.51% id in 196 aa; hypothetical protein 2333916 2883152 ECA2050 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050145.1 2333299 R 218491 CDS YP_050146.1 50120979 2882929 complement(2334054..2335148) 1 NC_004547.2 Similar to Yersinia pestis putitive ABC-transporter ATP-binding protein ypo2846 SWALL:Q8ZCW2 (EMBL:AJ414154) (361 aa) fasta scores: E(): 7.7e-108, 79.67% id in 364 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa0603 SWALL:Q9I5T5 (EMBL:AE004496) (369 aa) fasta scores: E(): 3.7e-81, 63.3% id in 357 aa; ABC transporter ATP-binding protein 2335148 2882929 ECA2051 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_050146.1 2334054 R 218491 CDS YP_050147.1 50120980 2882930 complement(2335354..2336847) 1 NC_004547.2 Similar to Yersinia pestis GntR-family regulatory protein ypo2845 or y1389 SWALL:AAM84961 (EMBL:AJ414154) (501 aa) fasta scores: E(): 2.9e-125, 62.92% id in 499 aa, and to Rhizobium meliloti probable rhizopine catabolism regulatory protein MocR SWALL:MOCR_RHIME (SWALL:P49309) (493 aa) fasta scores: E(): 6.7e-70, 40.98% id in 488 aa; GntR family transcriptional regulator 2336847 2882930 ECA2052 Pectobacterium atrosepticum SCRI1043 GntR family transcriptional regulator YP_050147.1 2335354 R 218491 CDS YP_050148.1 50120981 2883163 2336995..2338260 1 NC_004547.2 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; 4-aminobutyrate aminotransferase 2338260 gabT 2883163 gabT Pectobacterium atrosepticum SCRI1043 4-aminobutyrate aminotransferase YP_050148.1 2336995 D 218491 CDS YP_050149.1 50120982 2883273 2338271..2339743 1 NC_004547.2 Similar to Escherichia coli succinate-semialdehyde dehydrogenase [NADP+] GabD or b2661 SWALL:GABD_ECOLI (SWALL:P25526) (482 aa) fasta scores: E(): 6e-122, 65.76% id in 482 aa; succinate-semialdehyde dehydrogenase 2339743 gabD 2883273 gabD Pectobacterium atrosepticum SCRI1043 succinate-semialdehyde dehydrogenase YP_050149.1 2338271 D 218491 CDS YP_050150.1 50120983 2882931 2340110..2341189 1 NC_004547.2 Similar to Pseudomonas putida polyamine ABC transporter, periplasmic polyamine-binding protein pp0412 SWALL:AAN66042 (EMBL:AE016775) (344 aa) fasta scores: E(): 4.2e-81, 57.84% id in 344 aa, and to Yersinia pestis transport system periplasmic protein ypo2843 or y1391 SWALL:Q8ZCW5 (EMBL:AJ414154) (342 aa) fasta scores: E(): 5e-103, 71.84% id in 341 aa; transport system, periplasmic solute-binding protein 2341189 2882931 ECA2055 Pectobacterium atrosepticum SCRI1043 transport system, periplasmic solute-binding protein YP_050150.1 2340110 D 218491 CDS YP_050151.1 50120984 2882813 2341232..2342500 1 NC_004547.2 Similar to Yersinia pestis ABC transporter permease ypo2842 SWALL:Q8ZCW6 (EMBL:AJ414154) (421 aa) fasta scores: E(): 2.8e-118, 72.4% id in 424 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa0605 SWALL:Q9I5T3 (EMBL:AE004497) (415 aa) fasta scores: E(): 4.5e-85, 54.47% id in 402 aa; transport system, permease 2342500 2882813 ECA2056 Pectobacterium atrosepticum SCRI1043 transport system, permease YP_050151.1 2341232 D 218491 CDS YP_050152.1 50120985 2882814 2342538..2343356 1 NC_004547.2 Similar to Yersinia pestis ABC transporter permease ypo2841 SWALL:Q8ZCW7 (EMBL:AJ414154) (282 aa) fasta scores: E(): 4.6e-83, 83.64% id in 269 aa, and to Pseudomonas putida polyamine ABC transporter, permease protein pp0414 SWALL:AAN66044 (EMBL:AE016775) (275 aa) fasta scores: E(): 3.4e-63, 65.13% id in 261 aa; transport system, permease 2343356 2882814 ECA2057 Pectobacterium atrosepticum SCRI1043 transport system, permease YP_050152.1 2342538 D 218491 CDS YP_050153.1 50120986 2882815 2343795..2344529 1 NC_004547.2 Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase pa5150 SWALL:Q9HU34 (EMBL:AE004928) (245 aa) fasta scores: E(): 1.2e-79, 82.04% id in 245 aa, and to Bradyrhizobium japonicum short-chain alcohol dehydrogenase FixR or bll2623 SWALL:BAC47888 (EMBL:AP005944) (250 aa) fasta scores: E(): 2.1e-59, 64.05% id in 242 aa; short-chain dehydrogenase 2344529 2882815 ECA2058 Pectobacterium atrosepticum SCRI1043 short-chain dehydrogenase YP_050153.1 2343795 D 218491 CDS YP_050154.1 50120987 2882302 2344522..2345646 1 NC_004547.2 Similar to Methylobacillus flagellatum homoserine kinase ThrB SWALL:KHSE_METFL (SWALL:Q9RAM6) (319 aa) fasta scores: E(): 6.1e-06, 28.8% id in 302 aa, and to Rhizobium loti homoserine kinase mlr7168 SWALL:Q986X7 (EMBL:AP003011) (364 aa) fasta scores: E(): 7e-40, 39.21% id in 329 aa; phosphotransferase 2345646 2882302 ECA2059 Pectobacterium atrosepticum SCRI1043 phosphotransferase YP_050154.1 2344522 D 218491 CDS YP_050155.1 50120988 2882303 2345658..2346944 1 NC_004547.2 Similar to Rhizobium meliloti aminotransferase ra0973 or sma1761 SWALL:Q92YB1 (EMBL:AE007283) (438 aa) fasta scores: E(): 7.6e-92, 58.13% id in 418 aa, and to Agrobacterium tumefaciens pyridoxal phosphate aminotransferase atu5251 or agr_pat_358 SWALL:Q8UK72 (EMBL:AE008947) (464 aa) fasta scores: E(): 3.4e-74, 51.09% id in 411 aa; class-III aminotransferase 2346944 2882303 ECA2060 Pectobacterium atrosepticum SCRI1043 class-III aminotransferase YP_050155.1 2345658 D 218491 CDS YP_050156.1 50120989 2882304 complement(2346979..2348505) 1 NC_004547.2 Similar to Salmonella typhimurium methyl-accepting chemotaxis citrate transducer Tcp or stm3577 SWALL:MCPC_SALTY (SWALL:Q02755) (547 aa) fasta scores: E(): 1.2e-52, 42.21% id in 514 aa, and to Ralstonia solanacearum probable methyl-accepting chemotaxis I CheD3 or rsp1406 or rs02052 SWALL:Q8XQ80 (EMBL:AL646084) (608 aa) fasta scores: E(): 8.4e-59, 45.31% id in 512 aa; methyl-accepting chemotaxis protein 2348505 2882304 ECA2061 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_050156.1 2346979 R 218491 CDS YP_050157.1 50120990 2882254 complement(2348945..2350252) 1 NC_004547.2 Similar to Salmonella typhimurium phosphatase stm3595 SWALL:Q8ZLD5 (EMBL:AE008866) (423 aa) fasta scores: E(): 2.3e-84, 55.37% id in 437 aa; phosphatase 2350252 2882254 ECA2062 Pectobacterium atrosepticum SCRI1043 phosphatase YP_050157.1 2348945 R 218491 CDS YP_050158.1 50120991 2882255 2350811..2351833 1 NC_004547.2 Similar to Escherichia coli D-methionine transport ATP-binding protein MetN or Abc or b0199 SWALL:METN_ECOLI (SWALL:P30750) (343 aa) fasta scores: E(): 3.3e-48, 42.89% id in 345 aa, and to Salmonella typhimurium ABC-type transport system ATPase component/cell division protein SfbB or stm0511 SWALL:Q8ZR89 (EMBL:AE008719) (338 aa) fasta scores: E(): 1.2e-77, 65.97% id in 338 aa; ABC transporter ATP-binding protein 2351833 2882255 ECA2063 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_050158.1 2350811 D 218491 CDS YP_050159.1 50120992 2882256 2351826..2352485 1 NC_004547.2 Similar to Salmonella enterica subsp. enterica serovar Typhi Ty2 ABC transporter integral membrane protein sfbC SWALL:AAO69940 (EMBL:AE016842) (219 aa) fasta scores: E(): 5.5e-61, 81.65% id in 218 aa, and to Oceanobacillus iheyensis ABC transporter permease ob2099 SWALL:Q8EPK2 (EMBL:AP004600) (221 aa) fasta scores: E(): 1.1e-40, 57.4% id in 216 aa; ABC transporter permease 2352485 2882256 ECA2064 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_050159.1 2351826 D 218491 CDS YP_050160.1 50120993 2881834 2352527..2353639 1 NC_004547.2 Similar to Amycolatopsis sp N-acylamino acid racemase aaaR SWALL:Q44244 (EMBL:D30738) (368 aa) fasta scores: E(): 5.9e-54, 43.09% id in 362 aa, and to Bacillus subtilis O-succinylbenzoate-CoA synthase menC SWALL:O34514 (EMBL:AF008220) (371 aa) fasta scores: E(): 4e-66, 48.5% id in 369 aa; N-acylamino acid racemase 2353639 2881834 ECA2065 Pectobacterium atrosepticum SCRI1043 N-acylamino acid racemase YP_050160.1 2352527 D 218491 CDS YP_050161.1 50120994 2881835 2353959..2354768 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella enteritidis ABC-type transport system ATPase component/cell division protein sfba or stm0510 SWALL:Q9S4Z1 (EMBL:AE008719) (276 aa) fasta scores: E(): 4.6e-58, 63.32% id in 259 aa, and to Oceanobacillus iheyensis lipoprotein ob2098 SWALL:BAC14054 (EMBL:AP004600) (274 aa) fasta scores: E(): 1.2e-37, 44.65% id in 262 aa; lipoprotein 2354768 2881835 ECA2066 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_050161.1 2353959 D 218491 CDS YP_050162.1 50120995 2884102 2354962..2355252 1 NC_004547.2 Similar to Bacteriophage lambda Bor lipoprotein precursor boR SWALL:BOR_LAMBD (SWALL:P26814) (97 aa) fasta scores: E(): 9e-26, 74.22% id in 97 aa, and to Escherichia coli Iss SWALL:Q9XDL2 (EMBL:AF042279) (102 aa) fasta scores: E(): 1.1e-25, 71.87% id in 96 aa; lipoprotein 2355252 bor 2884102 bor Pectobacterium atrosepticum SCRI1043 lipoprotein YP_050162.1 2354962 D 218491 CDS YP_050163.1 50120996 2881836 2355815..2357275 1 NC_004547.2 Similar to Pseudomonas sp. KIE171 permease ipuG SWALL:Q936S6 (EMBL:AJ311159) (476 aa) fasta scores: E(): 4.2e-47, 34.95% id in 472 aa, and to Pseudomonas aeruginosa amino acid permease SWALL:AAN62240 (EMBL:AF440524) (476 aa) fasta scores: E(): 2.5e-45, 32.77% id in 476 aa; permease 2357275 2881836 ECA2068 Pectobacterium atrosepticum SCRI1043 permease YP_050163.1 2355815 D 218491 CDS YP_050164.1 50120997 2881837 complement(2357361..2358035) 1 NC_004547.2 Similar to Oceanobacillus iheyensis transcriptional regulator ob0289 SWALL:BAC12245 (EMBL:AP004594) (184 aa) fasta scores: E(): 0.0055, 20.87% id in 182 aa, and to Streptomyces coelicolor transcriptional regulator sco6121 or sc9b2.08C SWALL:Q9Z551 (EMBL:AL939126) (192 aa) fasta scores: E(): 0.011, 29.47% id in 95 aa; TetR family transcriptional regulator 2358035 2881837 ECA2069 Pectobacterium atrosepticum SCRI1043 TetR family transcriptional regulator YP_050164.1 2357361 R 218491 CDS YP_050165.1 50120998 2881672 complement(2358133..2359305) 1 NC_004547.2 Similar to Pseudomonas putida major facilitator family transporter pp3368 SWALL:AAN68972 (EMBL:AE016786) (394 aa) fasta scores: E(): 6.5e-73, 53.29% id in 379 aa, and to Xanthomonas axonopodis mfs transporter araj or xac1363 SWALL:Q8PMR3 (EMBL:AE011767) (393 aa) fasta scores: E(): 5.5e-71, 51.59% id in 376 aa; major facilitator family transporter 2359305 2881672 ECA2070 Pectobacterium atrosepticum SCRI1043 major facilitator family transporter YP_050165.1 2358133 R 218491 CDS YP_050166.1 50120999 2881673 complement(2359589..2360806) 1 NC_004547.2 Similar to Mycobacterium leprae cytochrome P450 ml2088 SWALL:Q9CBE7 (EMBL:AL583924) (434 aa) fasta scores: E(): 7.1e-22, 26.3% id in 422 aa, and to Bacillus subtilis cytochrome P450 YjiB SWALL:YJIB_BACSU (SWALL:O34374) (396 aa) fasta scores: E(): 1.8e-20, 27.11% id in 343 aa; cytochrome P450 2360806 2881673 ECA2071 Pectobacterium atrosepticum SCRI1043 cytochrome P450 YP_050166.1 2359589 R 218491 CDS YP_050167.1 50121000 2881674 complement(2360796..2361239) 1 NC_004547.2 Similar to Citrobacter braakii cindoxin cinC SWALL:Q8VQF4 (EMBL:AF456128) (154 aa) fasta scores: E(): 3.2e-13, 37.5% id in 144 aa, and to Escherichia coli protein mioc mioc or b3742 SWALL:MIOC_ECOLI (SWALL:P03817) (146 aa) fasta scores: E(): 8.1e-09, 33.89% id in 118 aa; flavodoxin 2361239 2881674 ECA2072 Pectobacterium atrosepticum SCRI1043 flavodoxin YP_050167.1 2360796 R 218491 CDS YP_050168.1 50121001 2881479 complement(2361327..2362568) 1 NC_004547.2 Similar to Salvelinus fontinalis NADPH:adrenodoxin oxidoreductase, mitochondrial precursor SWALL:ADRO_SALFO (SWALL:P82861) (498 aa) fasta scores: E(): 1.5e-23, 31.73% id in 460 aa, and to Rhodococcus rhodochrous adrenodoxin reductase-like XplB SWALL:Q8GPH8 (EMBL:AF449421) (425 aa) fasta scores: E(): 2.2e-52, 40.32% id in 429 aa; oxidoreductase 2362568 2881479 ECA2073 Pectobacterium atrosepticum SCRI1043 oxidoreductase YP_050168.1 2361327 R 218491 CDS YP_050169.1 50121002 2881480 complement(2363122..2364543) 1 NC_004547.2 Similar to Bradyrhizobium japonicum Bll7601 protein bll7601 SWALL:BAC52866 (EMBL:AP005962) (461 aa) fasta scores: E(): 4.6e-94, 52.19% id in 456 aa, and to Streptomyces coelicolor peptidase sco5185 or 2sc3b6.09 SWALL:Q9FCK3 (EMBL:AL939122) (470 aa) fasta scores: E(): 1.8e-25, 29.97% id in 457 aa; hypothetical protein 2364543 2881480 ECA2074 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050169.1 2363122 R 218491 CDS YP_050170.1 50121003 2881481 2364687..2365619 1 NC_004547.2 Similar to Escherichia coli cyn operon transcriptional activator CynR or b0338 SWALL:CYNR_ECOLI (SWALL:P27111) (311 aa) fasta scores: E(): 4.5e-14, 29.51% id in 288 aa, and to Bradyrhizobium japonicum transcriptional regulatory protein bll3773 SWALL:BAC49038 (EMBL:AP005948) (312 aa) fasta scores: E(): 9e-17, 30.79% id in 302 aa; LysR family transcriptional regulator 2365619 2881481 ECA2075 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_050170.1 2364687 D 218491 CDS YP_050171.1 50121004 2885245 complement(2365644..2366723) 1 NC_004547.2 Similar to Erwinia amylovora HrcU SWALL:Q46649 (EMBL:L25828) (360 aa) fasta scores: E(): 1e-95, 66.94% id in 360 aa, and to Pantoea agglomerans HrcU protein HrcU SWALL:Q47859 (EMBL:X99768) (360 aa) fasta scores: E(): 5.4e-92, 64.34% id in 359 aa; type III secretion system protein 2366723 hrcU 2885245 hrcU Pectobacterium atrosepticum SCRI1043 type III secretion system protein YP_050171.1 2365644 R 218491 CDS YP_050172.1 50121005 2885256 complement(2366737..2367537) 1 NC_004547.2 Similar to Erwinia amylovora HrcT SWALL:Q46648 (EMBL:L25828) (265 aa) fasta scores: E(): 2.4e-69, 66.92% id in 257 aa, and to Pantoea agglomerans HrcT protein HrcT SWALL:Q47858 (EMBL:X99768) (265 aa) fasta scores: E(): 4.5e-67, 62.3% id in 260 aa; type III secretion system protein 2367537 hrcT 2885256 hrcT Pectobacterium atrosepticum SCRI1043 type III secretion system protein YP_050172.1 2366737 R 218491 CDS YP_050173.1 50121006 2885255 complement(2367544..2367804) 1 NC_004547.2 Similar to Erwinia amylovora HrcS SWALL:Q46647 (EMBL:L25828) (86 aa) fasta scores: E(): 2.8e-22, 76.19% id in 84 aa, and to Pantoea agglomerans HrcS protein HrcS SWALL:Q47857 (EMBL:X99768) (83 aa) fasta scores: E(): 2.6e-21, 75.61% id in 82 aa; type III secretion system protein 2367804 hrcS 2885255 hrcS Pectobacterium atrosepticum SCRI1043 type III secretion system protein YP_050173.1 2367544 R 218491 CDS YP_050174.1 50121007 2885254 complement(2367812..2368465) 1 NC_004547.2 part of a set of proteins involved in the infection of eukaryotic cells; in plant pathogens involved in the hypersensitivity response; type III secretion system protein 2368465 hrcR 2885254 hrcR Pectobacterium atrosepticum SCRI1043 type III secretion system protein YP_050174.1 2367812 R 218491 CDS YP_050175.1 50121008 2885263 complement(2368462..2369679) 1 NC_004547.2 Similar to Erwinia amylovora HrcQ SWALL:Q46645 (EMBL:L25828) (338 aa) fasta scores: E(): 1.8e-11, 34.59% id in 370 aa, and to Pantoea agglomerans HrcQb protein SWALL:Q47855 (EMBL:X99768) (108 aa) fasta scores: E(): 9.8e-11, 46.22% id in 106 aa; type III secretion system protein 2369679 hrcQ 2885263 hrcQ Pectobacterium atrosepticum SCRI1043 type III secretion system protein YP_050175.1 2368462 R 218491 CDS YP_050176.1 50121009 2884825 complement(2369676..2370197) 1 NC_004547.2 Similar to Erwinia amylovora HrpP SWALL:Q46644 (EMBL:L25828) (158 aa) fasta scores: E(): 1.6e-06, 36.6% id in 112 aa, and to Pantoea agglomerans HrcQa protein hrcQa SWALL:Q47853 (EMBL:X99768) (157 aa) fasta scores: E(): 8e-06, 28.81% id in 118 aa; type III secretion system protein 2370197 hrpP 2884825 hrpP Pectobacterium atrosepticum SCRI1043 type III secretion system protein YP_050176.1 2369676 R 218491 CDS YP_050177.1 50121010 2884862 complement(2370194..2370631) 1 NC_004547.2 Similar to Erwinia amylovora HrpO SWALL:Q46643 (EMBL:L25828) (148 aa) fasta scores: E(): 6.5e-09, 41.73% id in 127 aa, and to Pantoea agglomerans HrpO protein SWALL:Q937I2 (EMBL:X99768) (146 aa) fasta scores: E(): 0.0013, 30.7% id in 127 aa; type III secretion system protein 2370631 hrpO 2884862 hrpO Pectobacterium atrosepticum SCRI1043 type III secretion system protein YP_050177.1 2370194 R 218491 CDS YP_050178.1 50121011 2885262 complement(2370621..2371991) 1 NC_004547.2 Similar to Erwinia amylovora HrcN SWALL:Q46642 (EMBL:L25828) (454 aa) fasta scores: E(): 3.9e-124, 78.7% id in 446 aa, and to Pantoea agglomerans HrcN protein HrcN SWALL:Q937I3 (EMBL:X99768) (454 aa) fasta scores: E(): 4.7e-121, 76.4% id in 445 aa; type III secretion system protein 2371991 hrcN 2885262 hrcN Pectobacterium atrosepticum SCRI1043 type III secretion system protein YP_050178.1 2370621 R 218491 CDS YP_050179.1 50121012 2884826 complement(2371988..2372923) 1 NC_004547.2 Similar to Erwinia amylovora HrpQ SWALL:Q46641 (EMBL:L25828) (310 aa) fasta scores: E(): 3.4e-50, 48.89% id in 317 aa, and to Pantoea agglomerans HrpQ protein HrpQ SWALL:Q937I4 (EMBL:X99768) (307 aa) fasta scores: E(): 4.9e-47, 46.96% id in 313 aa; type III secretion system protein 2372923 hrpQ 2884826 hrpQ Pectobacterium atrosepticum SCRI1043 type III secretion system protein YP_050179.1 2371988 R 218491 CDS YP_050180.1 50121013 2885088 complement(2372933..2375035) 1 NC_004547.2 Similar to Erwinia amylovora harpin secretion protein HrpI SWALL:HRPI_ERWAM (SWALL:P35654) (697 aa) fasta scores: E(): 2e-193, 76.35% id in 702 aa, and to Pantoea agglomerans HrcV protein HrcV SWALL:Q937I5 (EMBL:X99768) (719 aa) fasta scores: E(): 2.2e-196, 75.42% id in 704 aa; type III secretion system protein 2375035 hrpI 2885088 hrpI Pectobacterium atrosepticum SCRI1043 type III secretion system protein YP_050180.1 2372933 R 218491 CDS YP_050181.1 50121014 2885089 complement(2375032..2376222) 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. atrosepticum secretion protein HrpJ type III HrpJ SWALL:Q8KM25 (EMBL:AJ496800) (402 aa) fasta scores: E(): 1.2e-121, 90.79% id in 402 aa, and to Erwinia chrysanthemi HrpJ WALL:AAO34609 (EMBL:AY169276) (393 aa) fasta scores: E(): 2.3e-80, 64.59% id in 387 aa; type III secretion system protein 2376222 hrpJ 2885089 hrpJ Pectobacterium atrosepticum SCRI1043 type III secretion system protein YP_050181.1 2375032 R 218491 CDS YP_050182.1 50121015 2884860 2376550..2377092 1 NC_004547.2 Similar to Erwinia chrysanthemi HrpL WALL:Q8KUM5 (EMBL:AF448202) (184 aa) fasta scores: E(): 9.4e-40, 71.42% id in 168 aa, and to Erwinia pyrifoliae sigma factor hrpL SWALL:CAD27523 (EMBL:AJ438881) (182 aa) fasta scores: E(): 1.9e-31, 56.97% id in 165 aa; sigma factor 2377092 hrpL 2884860 hrpL Pectobacterium atrosepticum SCRI1043 sigma factor YP_050182.1 2376550 D 218491 CDS YP_050183.1 50121016 2884614 2377334..2378770 1 NC_004547.2 Similar to Erwinia chrysanthemi HrpX SWALL:Q8KUM4 (EMBL:AF448202) (450 aa) fasta scores: E(): 3.4e-115, 68.25% id in 441 aa, and to Erwinia amylovora sensor kinase HrpX SWALL:Q9X3S8 (EMBL:AF083877) (494 aa) fasta scores: E(): 9.5e-100, 56.13% id in 481 aa; two-component sensor kinase 2378770 hrpX 2884614 hrpX Pectobacterium atrosepticum SCRI1043 two-component sensor kinase YP_050183.1 2377334 D 218491 CDS YP_050184.1 50121017 2884527 2378840..2379481 1 NC_004547.2 Similar to Erwinia chrysanthemi HrpY SWALL:Q8KUM3 (EMBL:AF448202) (213 aa) fasta scores: E(): 6.8e-57, 75.94% id in 212 aa, and to Erwinia amylovora response regulator HrpY SWALL:Q9X3S9 (EMBL:AF083877) (213 aa) fasta scores: E(): 1.3e-51, 69.34% id in 212 aa; two-component response regulator 2379481 hrpY 2884527 hrpY Pectobacterium atrosepticum SCRI1043 two-component response regulator YP_050184.1 2378840 D 218491 CDS YP_050185.1 50121018 2884827 2379836..2380900 1 NC_004547.2 Similar to Erwinia chrysanthemi HrpS SWALL:Q8KUM2 (EMBL:AF448202) (327 aa) fasta scores: E(): 6.8e-80, 74.67% id in 304 aa, and to Erwinia amylovora sigma-54-dependent enhancer-binding protein HrpS SWALL:Q9X3T0 (EMBL:AF083877) (324 aa) fasta scores: E(): 6.8e-66, 61.99% id in 321 aa; sigma-54-dependent enhancer-binding protein 2380900 hrpS 2884827 hrpS Pectobacterium atrosepticum SCRI1043 sigma-54-dependent enhancer-binding protein YP_050185.1 2379836 D 218491 CDS YP_050186.1 50121019 2881224 complement(2380997..2382616) 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein Pa2200 SWALL:Q9I1R7 (EMBL:AE004646) (531 aa) fasta scores: E(): 4e-52, 32.23% id in 518 aa, and to Salmonella typhimurium diguanylate cyclase/phosphodiesterase domain 2 ylab or stm0468 SWALL:Q8ZRB0 (EMBL:AE008717) (516 aa) fasta scores: E(): 2.3e-34, 29.72% id in 508 aa; signaling membrane protein 2382616 2881224 ECA2091 Pectobacterium atrosepticum SCRI1043 signaling membrane protein YP_050186.1 2380997 R 218491 CDS YP_050187.1 50121020 2881225 2382636..2382794 1 NC_004547.2 Doubtful CDS. no significant database matches; hypothetical protein 2382794 2881225 ECA2092 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050187.1 2382636 D 218491 CDS YP_050188.1 50121021 2885246 2382958..2383164 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum HrpA SWALL:Q93FZ8 (EMBL:AF302656) (68 aa) fasta scores: E(): 5.7e-21, 100% id in 68 aa, and to Erwinia chrysanthemi HrpA SWALL:Q8KUM1 (EMBL:AF448202) (66 aa) fasta scores: E(): 5.9e-11, 63.63% id in 66 aa; type III secretion system protein 2383164 hrpA 2885246 hrpA Pectobacterium atrosepticum SCRI1043 type III secretion system protein YP_050188.1 2382958 D 218491 CDS YP_050189.1 50121022 2885247 2383167..2383604 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum HrpB SWALL:Q93FZ7 (EMBL:AF302656) (144 aa) fasta scores: E(): 1.3e-49, 95.1% id in 143 aa, and to Erwinia chrysanthemi HrpB SWALL:Q8KUM0 (EMBL:AF448202) (122 aa) fasta scores: E(): 1.9e-18, 62.03% id in 108 aa; type III secretion system protein 2383604 hrpB 2885247 hrpB Pectobacterium atrosepticum SCRI1043 type III secretion system protein YP_050189.1 2383167 D 218491 CDS YP_050190.1 50121023 2885261 2383611..2384378 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum HrcJ SWALL:Q93FZ6 (EMBL:AF302656) (255 aa) fasta scores: E(): 2.1e-90, 95.66% id in 254 aa, and to Erwinia chrysanthemi HrcJ SWALL:Q8KUL9 (EMBL:AF448202) (245 aa) fasta scores: E(): 5.5e-67, 75.94% id in 237 aa; type III secretion system protein 2384378 hrcJ 2885261 hrcJ Pectobacterium atrosepticum SCRI1043 type III secretion system protein YP_050190.1 2383611 D 218491 CDS YP_050191.1 50121024 2885282 2384375..2385007 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum HrpD SWALL:Q93FZ5 (EMBL:AF302656) (209 aa) fasta scores: E(): 2.5e-67, 76.52% id in 213 aa, and to Erwinia chrysanthemi HrpD SWALL:Q8KUL8 (EMBL:AF448202) (192 aa) fasta scores: E(): 3.3e-21, 43.14% id in 197 aa; type III secretion system protein 2385007 hrpD 2885282 hrpD Pectobacterium atrosepticum SCRI1043 type III secretion system protein YP_050191.1 2384375 D 218491 CDS YP_050192.1 50121025 2885283 2385045..2385647 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum HrpE SWALL:Q93FZ4 (EMBL:AF302656) (199 aa) fasta scores: E(): 3.5e-65, 87.37% id in 198 aa, and to Erwinia chrysanthemi HrpE SWALL:Q8KUL7 (EMBL:AF448202) (200 aa) fasta scores: E(): 7.5e-28, 42.85% id in 196 aa; type III secretion system protein 2385647 hrpE 2885283 hrpE Pectobacterium atrosepticum SCRI1043 type III secretion system protein YP_050192.1 2385045 D 218491 CDS YP_050193.1 50121026 2885284 2385755..2385979 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum HrpF SWALL:Q93FZ3 (EMBL:AF302656) (74 aa) fasta scores: E(): 3.6e-27, 97.29% id in 74 aa, and to Erwinia chrysanthemi HrpF SWALL:P94765 (EMBL:AF501263) (75 aa) fasta scores: E(): 6.1e-19, 72.6% id in 73 aa; type III secretion system protein 2385979 hrpF 2885284 hrpF Pectobacterium atrosepticum SCRI1043 type III secretion system protein YP_050193.1 2385755 D 218491 CDS YP_050194.1 50121027 2885087 2385990..2386400 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum HrpG SWALL:Q93FZ2 (EMBL:AF302656) (136 aa) fasta scores: E(): 3.7e-48, 87.5% id in 136 aa, and to Erwinia chrysanthemi secretion protein HrpG SWALL:Q8KWF8 (EMBL:AF411590) (144 aa) fasta scores: E(): 1.1e-22, 49.26% id in 136 aa; type III secretion system protein 2386400 hrpG 2885087 hrpG Pectobacterium atrosepticum SCRI1043 type III secretion system protein YP_050194.1 2385990 D 218491 CDS YP_050195.1 50121028 2885260 2386393..2388462 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum HrcC SWALL:Q93FZ1 (EMBL:AF302656) (689 aa) fasta scores: E(): 0, 95.78% id in 688 aa, and to Erwinia amylovora HrcC precursor SWALL:Q46625 (EMBL:U56662) (676 aa) fasta scores: E(): 1.3e-169, 68.65% id in 654 aa; type III secretion system protein 2388462 hrcC 2885260 hrcC Pectobacterium atrosepticum SCRI1043 type III secretion system protein YP_050195.1 2386393 D 218491 CDS YP_050196.1 50121029 2884828 2388490..2388681 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum HrpT SWALL:Q93FZ0 (EMBL:AF302656) (63 aa) fasta scores: E(): 9.6e-22, 84.12% id in 63 aa, and to Erwinia chrysanthemi HrpT precursor SWALL:P94768 (EMBL:AF501263) (61 aa) fasta scores: E(): 6.3e-11, 50.82% id in 61 aa; type III secretion system lipoprotein 2388681 hrpT 2884828 hrpT Pectobacterium atrosepticum SCRI1043 type III secretion system lipoprotein YP_050196.1 2388490 D 218491 CDS YP_050197.1 50121030 2884612 2388674..2389021 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum HrpV SWALL:Q93FY9 (EMBL:AF302656) (115 aa) fasta scores: E(): 8.9e-35, 80% id in 115 aa, and to Erwinia chrysanthemi HrpV SWALL:P94769 (EMBL:AF501263) (136 aa) fasta scores: E(): 8.8e-07, 34.51% id in 113 aa; type III secretion system protein 2389021 hrpV 2884612 hrpV Pectobacterium atrosepticum SCRI1043 type III secretion system protein YP_050197.1 2388674 D 218491 CDS YP_050198.1 50121031 2884861 2389167..2390282 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum HrpN SWALL:Q93FY8 (EMBL:AF302656) (356 aa) fasta scores: E(): 4e-79, 91.37% id in 371 aa, and to Erwinia carotovora harpin hrpN SWALL:HRPN_ERWCA (SWALL:Q47279) (356 aa) fasta scores: E(): 2.2e-78, 90.83% id in 371 aa; hypothetical protein 2390282 hrpN 2884861 hrpN Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050198.1 2389167 D 218491 CDS YP_050199.1 50121032 2881226 2390748..2392775 1 NC_004547.2 Similar to Escherichia coli VgrG protein SWALL:O52679 (EMBL:AF044506) (713 aa) fasta scores: E(): 4.2e-76, 37.78% id in 651 aa, and to Vibrio cholerae VgrG protein vc1416 SWALL:Q9KS45 (EMBL:AE004220) (1163 aa) fasta scores: E(): 1.2e-121, 52.95% id in 676 aa; VgrG protein 2392775 2881226 ECA2104 Pectobacterium atrosepticum SCRI1043 VgrG protein YP_050199.1 2390748 D 218491 CDS YP_050200.1 50121033 2881916 2392772..2393569 1 NC_004547.2 Weakly similar to Xanthomonas oryzae HrpG SWALL:Q938P2 (EMBL:AY049753) (263 aa) fasta scores: E(): 8, 28.07% id in 114 aa, and to Vibrio cholerae hypothetical protein Vc1417 SWALL:Q9KS44 (EMBL:AE004220) (286 aa) fasta scores: E(): 1.1e-07, 26.29% id in 251 aa; type III secretion system protein 2393569 2881916 ECA2105 Pectobacterium atrosepticum SCRI1043 type III secretion system protein YP_050200.1 2392772 D 218491 CDS YP_050201.1 50121034 2881917 2393569..2395563 1 NC_004547.2 No significant database matches. Strongly similar to ECA4356 (88.084% id) and ECA4431 (87.651% id).; hypothetical protein 2395563 2881917 ECA2106 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050201.1 2393569 D 218491 CDS YP_050202.1 50121035 2881918 2395563..2396264 1 NC_004547.2 Similar to Shewanella oneidensis hypothetical protein soa0150 SWALL:AAN53066 (EMBL:AE015921) (221 aa) fasta scores: E(): 3.1e-26, 42.85% id in 224 aa, and to Shewanella oneidensis hypothetical protein soa0070 SWALL:AAN53005 (EMBL:AE015914) (234 aa) fasta scores: E(): 1.3e-25, 39.66% id in 237 aa. Also similar to ECA2108 (83.051% id), ECA2109 (72.152% id), ECA4357 (77.637% id) and ECA4430 (80.085% id).; lipoprotein 2396264 2881918 ECA2107 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_050202.1 2395563 D 218491 CDS YP_050203.1 50121036 2882008 2396319..2397029 1 NC_004547.2 Similar to Shewanella oneidensis hypothetical protein soa0070 SWALL:AAN53005 (EMBL:AE015914) (234 aa) fasta scores: E(): 6.5e-27, 38.91% id in 239 aa, and to Shewanella oneidensis hypothetical protein soa0150 SWALL:AAN53066 (EMBL:AE015921) (221 aa) fasta scores: E(): 9.8e-25, 40% id in 225 aa; lipoprotein 2397029 2882008 ECA2108 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_050203.1 2396319 D 218491 CDS YP_050204.1 50121037 2882009 2397084..2397791 1 NC_004547.2 Similar to Shewanella oneidensis hypothetical protein soa0070 SWALL:AAN53005 (EMBL:AE015914) (234 aa) fasta scores: E(): 7.6e-29, 40.75% id in 238 aa, and to Shewanella oneidensis hypothetical protein soa0150 SWALL:AAN53066 (EMBL:AE015921) (221 aa) fasta scores: E(): 9.1e-28, 43.55% id in 225 aa. Also similar to ECA2107 (72.152% id), ECA2108 (72.152% id), ECA4357 (87.234% id) and ECA4430 (85.470% id).; lipoprotein 2397791 2882009 ECA2109 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_050204.1 2397084 D 218491 CDS YP_050205.1 50121038 2882010 2397840..2398106 1 NC_004547.2 Similar to Vibrio cholerae hypothetical protein Vca0105 SWALL:Q9KN60 (EMBL:AE004353) (94 aa) fasta scores: E(): 3.1e-16, 58.51% id in 94 aa, and to Escherichia coli O6 hypothetical protein c1887 SWALL:AAN80347 (EMBL:AE016760) (94 aa) fasta scores: E(): 8.3e-15, 58.51% id in 94 aa; hypothetical protein 2398106 2882010 ECA2110 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050205.1 2397840 D 218491 CDS YP_050206.1 50121039 2882011 complement(2398203..2398526) 1 NC_004547.2 Similar to Erwinia amylovora potential HrpW-specific chaperone SWALL:O87915 (EMBL:U94513) (110 aa) fasta scores: E(): 2e-10, 38.46% id in 104 aa; potential HrpW-specific chaperone 2398526 2882011 ECA2111 Pectobacterium atrosepticum SCRI1043 potential HrpW-specific chaperone YP_050206.1 2398203 R 218491 CDS YP_050207.1 50121040 2884613 complement(2398528..2399967) 1 NC_004547.2 Similar to Erwinia amylovora HrpW protein SWALL:O54508 (EMBL:Y13831) (447 aa) fasta scores: E(): 2.7e-36, 50.67% id in 448 aa, and to Pseudomonas syringae pv. maculicola type III effector hrpwpma SWALL:Q8RP12 (EMBL:AF458044) (424 aa) fasta scores: E(): 4.4e-28, 42.12% id in 470 aa; type III effector protein 2399967 hrpW 2884613 hrpW Pectobacterium atrosepticum SCRI1043 type III effector protein YP_050207.1 2398528 R 218491 CDS YP_050208.1 50121041 2885423 2400144..2404988 1 NC_004547.2 Similar to Erwinia amylovora DspE or DspA SWALL:O54581 (EMBL:U97504) (1838 aa) fasta scores: E(): 1.7e-101, 39.38% id in 1658 aa, and to Pseudomonas syringae avirulence protein AvrE SWALL:O66101 (EMBL:U97505) (1795 aa) fasta scores: E(): 1.6e-30, 28.32% id in 1592 aa; avirulence protein 2404988 dspE 2885423 dspE Pectobacterium atrosepticum SCRI1043 avirulence protein YP_050208.1 2400144 D 218491 CDS YP_050209.1 50121042 2885424 2405023..2405445 1 NC_004547.2 Similar to Erwinia amylovora DspF or DspB SWALL:O54621 (EMBL:U97504) (139 aa) fasta scores: E(): 1.8e-19, 42.85% id in 133 aa, and to Pseudomonas syringae avirulence protein AvrF SWALL:O66102 (EMBL:U97505) (129 aa) fasta scores: E(): 1.1e-13, 36.64% id in 131 aa; avirulence protein 2405445 dspF 2885424 dspF Pectobacterium atrosepticum SCRI1043 avirulence protein YP_050209.1 2405023 D 218491 CDS YP_050210.1 50121043 2882028 complement(2405455..2406120) 1 NC_004547.2 Similar to Rhizobium meliloti GntR-family transcriptional regulator ra0971 or sma1759 SWALL:Q92YB3 (EMBL:AE007283) (226 aa) fasta scores: E(): 4.3e-29, 45.23% id in 210 aa, and to Brucella suis transcriptional regulator, bra1096 SWALL:AAN34260 (EMBL:AE014602) (237 aa) fasta scores: E(): 3e-22, 40.65% id in 214 aa; transcriptional regulator 2406120 2882028 ECA2115 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_050210.1 2405455 R 218491 CDS YP_050211.1 50121044 2883059 2406458..2408131 1 NC_004547.2 Similar to Erwinia chrysanthemi HecB precursor HecB SWALL:P94771 (EMBL:AF501263) (558 aa) fasta scores: E(): 1e-144, 65.17% id in 537 aa, and to Proteus mirabilis hemolysin activator protein precursor HpmB SWALL:HLYB_PROMI (SWALL:P16465) (561 aa) fasta scores: E(): 6.5e-35, 27.27% id in 550 aa; hemolysin activator protein 2408131 hecB 2883059 hecB Pectobacterium atrosepticum SCRI1043 hemolysin activator protein YP_050211.1 2406458 D 218491 CDS YP_050212.1 50121045 2883057 2408181..2411585 1 NC_004547.2 Similar to Erwinia chrysanthemi hemolysin/hemagglutinin-like protein HecA precursor HecA SWALL:AAN38708 (EMBL:AF501263) (3848 aa) fasta scores: E(): 3.6e-110, 43.11% id in 1148 aa; hemolysin/hemagglutinin-like protein 2411585 hecA1 2883057 hecA1 Pectobacterium atrosepticum SCRI1043 hemolysin/hemagglutinin-like protein YP_050212.1 2408181 D 218491 CDS YP_050213.1 50121046 2883058 2411693..2426503 1 NC_004547.2 Similar to Erwinia chrysanthemi hemolysin/hemagglutinin-like protein HecA precursor HecA SWALL:P94772 (EMBL:AF501263) (3848 aa) fasta scores: E(): 7.2e-116, 36.39% id in 4407 aa; hemolysin/hemagglutinin-like protein HecA 2426503 hecA2 2883058 hecA2 Pectobacterium atrosepticum SCRI1043 hemolysin/hemagglutinin-like protein HecA YP_050213.1 2411693 D 218491 CDS YP_050214.1 50121047 2882029 2426505..2426837 1 NC_004547.2 hypothetical protein 2426837 2882029 ECA2119 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050214.1 2426505 D 218491 CDS YP_050215.1 50121048 2882030 complement(2426874..2427218) 1 NC_004547.2 hypothetical protein 2427218 2882030 ECA2120 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050215.1 2426874 R 218491 CDS YP_050216.1 50121049 2881580 complement(2427215..2427421) 1 NC_004547.2 Similar to Yersinia pestis hypothetical y0261 SWALL:Q8CLT6 (EMBL:AE013626) (74 aa) fasta scores: E(): 5.8e-07, 62.22% id in 45 aa, and to Enterococcus faecalis V583 hypothetical protein SWALL:AAO82028 (EMBL:AE016954) (72 aa) fasta scores: E(): 0.9, 37.83% id in 37 aa; hypothetical protein 2427421 2881580 ECA2121 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050216.1 2427215 R 218491 CDS YP_050217.1 50121050 2881581 <2427394..2427585 1 NC_004547.2 Partial CDS. Similar to the C-terminal regions of several including Photorhabdus luminescens Int SWALL:AAN64203 (EMBL:AY144117) (465 aa) fasta scores: E(): 0.0021, 44.23% id in 52 aa, and to Ralstonia solanacearum probable integrase/recombinase protein rsp0090 or rs05531 SWALL:Q8XTL6 (EMBL:AL646076) (347 aa) fasta scores: E(): 0.0064, 56.75% id in 37 aa; integrase/recombinase (partial) 2427585 2881581 ECA2122 Pectobacterium atrosepticum SCRI1043 integrase/recombinase (partial) YP_050217.1 <2427394 D 218491 CDS YP_050218.1 50121051 2881582 2427682..2427825 1 NC_004547.2 hypothetical protein 2427825 2881582 ECA2123 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050218.1 2427682 D 218491 CDS YP_050219.1 50121052 2881612 complement(2428006..2428491) 1 NC_004547.2 hypothetical protein 2428491 2881612 ECA2124 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050219.1 2428006 R 218491 CDS YP_050220.1 50121053 2881613 2428467..2428961 1 NC_004547.2 hypothetical protein 2428961 2881613 ECA2125 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050220.1 2428467 D 218491 CDS YP_050221.1 50121054 2881614 2428961..2429380 1 NC_004547.2 Similar to Listeria monocytogenes hypothetical protein Lmo1120 SWALL:Q8Y7Z9 (EMBL:AL591977) (138 aa) fasta scores: E(): 5.3e-24, 54.88% id in 133 aa; hypothetical protein 2429380 2881614 ECA2126 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050221.1 2428961 D 218491 CDS YP_050222.1 50121055 2885120 2429382..2429813 1 NC_004547.2 Similar to Listeria innocua hypothetical protein Lin1089 lin1089 SWALL:Q92CT2 (EMBL:AL596167) (145 aa) fasta scores: E(): 0.0006, 26.47% id in 136 aa, and to Listeria monocytogenes hypothetical protein Lmo1124 SWALL:Q8Y7Z5 (EMBL:AL591977) (145 aa) fasta scores: E(): 0.0071, 22.62% id in 137 aa; hypothetical protein 2429813 2885120 ECA2127 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050222.1 2429382 D 218491 CDS YP_050223.1 50121056 2885121 2430108..2431115 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c1207 SWALL:Q8FIZ4 (EMBL:AE016758) (537 aa) fasta scores: E(): 2.6e-19, 50.5% id in 295 aa; hypothetical protein 2431115 2885121 ECA2128 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050223.1 2430108 D 218491 CDS YP_050224.1 50121057 2885122 2431182..2431634 1 NC_004547.2 hypothetical protein 2431634 2885122 ECA2129 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050224.1 2431182 D 218491 CDS YP_050225.1 50121058 2884929 2431737..2432021 1 NC_004547.2 hypothetical protein 2432021 2884929 ECA2130 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050225.1 2431737 D 218491 CDS YP_050226.1 50121059 2884930 2432247..2432537 1 NC_004547.2 hypothetical protein 2432537 2884930 ECA2131 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050226.1 2432247 D 218491 CDS YP_050227.1 50121060 2884931 2432551..2433018 1 NC_004547.2 Similar to Pseudomonas putida carbon-nitrogen hydrolase family protein pp3019 SWALL:AAN68627 (EMBL:AE016785) (247 aa) fasta scores: E(): 1.6e-22, 50.35% id in 141 aa, and to Ralstonia solanacearum hypothetical protein rsc0704 or rs01509 SWALL:Q8Y1I6 (EMBL:AL646060) (249 aa) fasta scores: E(): 2.1e-10, 33.33% id in 135 aa; hypothetical protein 2433018 2884931 ECA2132 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050227.1 2432551 D 218491 CDS YP_050228.1 50121061 2884932 complement(2433253..2433552) 1 NC_004547.2 hypothetical protein 2433552 2884932 ECA2133 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050228.1 2433253 R 218491 CDS YP_050229.1 50121062 2884850 2433584..2434705 1 NC_004547.2 Similar to Agrobacterium tumefaciens ABC transporter, substrate binding protein atu2014 or agr_c_3652 SWALL:Q8UDV5 (EMBL:AE009153) (327 aa) fasta scores: E(): 7.6e-08, 23.3% id in 266 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2377 SWALL:Q9I1A2 (EMBL:AE004664) (424 aa) fasta scores: E(): 8.8e-43, 39.38% id in 325 aa; ABC transporter substrate binding protein 2434705 2884850 ECA2134 Pectobacterium atrosepticum SCRI1043 ABC transporter substrate binding protein YP_050229.1 2433584 D 218491 CDS YP_050230.1 50121063 2884851 complement(2434874..2436580) 1 NC_004547.2 Similar to Erwinia carotovora periplasmic pectate lyase precursor PelB SWALL:PELP_ERWCA (SWALL:P14005) (568 aa) fasta scores: E(): 0, 97% id in 568 aa, and to Erwinia carotovora pectatelyase SWALL:Q47466 (EMBL:J03673) (568 aa) fasta scores: E(): 0, 96.3% id in 568 aa. Also similar to ECA2402 (PelB) (37.782% id 532 aa overlap); periplasmic pectate lyase 2436580 2884851 ECA2135 Pectobacterium atrosepticum SCRI1043 periplasmic pectate lyase YP_050230.1 2434874 R 218491 CDS YP_050231.1 50121064 2884852 complement(2436680..2437444) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi hypothetical protein yiiy precursor yiiy or stm4051 or sty3821 SWALL:YIIY_SALTY (SWALL:P43022) (227 aa) fasta scores: E(): 3.1e-05, 23.96% id in 242 aa, and to Yersinia pestis exported protein ypo3995 or y3833 SWALL:AAM87378 (EMBL:AJ414160) (234 aa) fasta scores: E(): 0.00025, 21.42% id in 238 aa; hypothetical protein 2437444 2884852 ECA2136 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050231.1 2436680 R 218491 CDS YP_050232.1 50121065 2884552 complement(2437563..2438381) 1 NC_004547.2 Similar to Erwinia chrysanthemi oligogalacturonate-specific porin KdgM precursor KdgM SWALL:KDGM_ERWCH (SWALL:Q934G3) (236 aa) fasta scores: E(): 5e-05, 26.72% id in 247 aa, and to Salmonella typhi secreted protein sty1168 SWALL:Q8Z7M9 (EMBL:AL627269) (230 aa) fasta scores: E(): 5.4e-06, 27.83% id in 273 aa; hypothetical protein 2438381 2884552 ECA2137 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050232.1 2437563 R 218491 CDS YP_050233.1 50121066 2884553 complement(2438378..2438554) 1 NC_004547.2 hypothetical protein 2438554 2884553 ECA2138 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050233.1 2438378 R 218491 CDS YP_050234.1 50121067 2884554 complement(2439081..2439257) 1 NC_004547.2 hypothetical protein 2439257 2884554 ECA2139 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050234.1 2439081 R 218491 CDS YP_050235.1 50121068 2884740 2439405..2440412 1 NC_004547.2 Similar to Oceanobacillus iheyensis hypothetical protein ob3401 SWALL:BAC15357 (EMBL:AP004604) (363 aa) fasta scores: E(): 3.5e-64, 49.69% id in 328 aa, and to Agrobacterium tumefaciens oxidoreductase atu3965 or agr_l_1780 SWALL:Q8U8X3 (EMBL:AE009327) (338 aa) fasta scores: E(): 4.3e-62, 50.75% id in 333 aa; oxidoreductase 2440412 2884740 ECA2140 Pectobacterium atrosepticum SCRI1043 oxidoreductase YP_050235.1 2439405 D 218491 CDS YP_050236.1 50121069 2884741 2440593..2442395 1 NC_004547.2 catalyzes the hydrolysis of allophanate; allophanate hydrolase 2442395 2884741 ECA2141 Pectobacterium atrosepticum SCRI1043 allophanate hydrolase YP_050236.1 2440593 D 218491 CDS YP_050237.1 50121070 2884742 2442388..2446002 1 NC_004547.2 Similar to the C-terminal region of Saccharomyces cerevisiae urea amidolyase [includes: urea carboxylase and allophanate hydrolase] Dur1,2 or ybr208c or ybr1448 SWALL:DUR1_YEAST (SWALL:P32528) (1835 aa) fasta scores: E(): 0, 52.92% id in 1213 aa, and to Pseudomonas fluorescens urea amidolyase homologue uahA SWALL:Q9XAV3 (EMBL:AJ243652) (1213 aa) fasta scores: E(): 0, 51.47% id in 1224 aa; urea amidolyase 2446002 2884742 ECA2142 Pectobacterium atrosepticum SCRI1043 urea amidolyase YP_050237.1 2442388 D 218491 CDS YP_050238.1 50121071 2884033 2446059..2446862 1 NC_004547.2 Similar to Streptomyces coelicolor GntR-family transcriptional regulator sco3810 or scgd3.11C SWALL:Q9XA67 (EMBL:AL939117) (216 aa) fasta scores: E(): 1.1e-13, 32.09% id in 215 aa, and to Bradyrhizobium japonicum transcriptional regulatory protein bll3877 SWALL:BAC49142 (EMBL:AP005949) (217 aa) fasta scores: E(): 2e-12, 30.88% id in 204 aa; GntR family transcriptional regulator 2446862 2884033 ECA2143 Pectobacterium atrosepticum SCRI1043 GntR family transcriptional regulator YP_050238.1 2446059 D 218491 CDS YP_050239.1 50121072 2884034 2446859..2448127 1 NC_004547.2 Similar to Methylophilus methylotrophus amide-urea binding protein precursor FmdD SWALL:O50371 (EMBL:Y14964) (412 aa) fasta scores: E(): 2e-40, 42.13% id in 375 aa, and to Yersinia pestis substrate-binding periplasmic transport protein ypo1187 SWALL:Q8ZGU0 (EMBL:AJ414147) (422 aa) fasta scores: E(): 4.4e-144, 85.3% id in 422 aa; substrate-binding periplasmic transport protein 2448127 2884034 ECA2144 Pectobacterium atrosepticum SCRI1043 substrate-binding periplasmic transport protein YP_050239.1 2446859 D 218491 CDS YP_050240.1 50121073 2884035 2448198..2449772 1 NC_004547.2 Similar to Yersinia pestis branched-chain amino acid transport system, permease component ypo1188 SWALL:Q8ZGT9 (EMBL:AJ414147) (533 aa) fasta scores: E(): 1.5e-133, 73.2% id in 515 aa, and to Pseudomonas putida branched-chain amino acid ABC transporter, permease protein, pp4842 SWALL:AAN70411 (EMBL:AE016792) (346 aa) fasta scores: E(): 4.7e-95, 77.16% id in 346 aa; branched-chain amino acid transport system permease 2449772 2884035 ECA2145 Pectobacterium atrosepticum SCRI1043 branched-chain amino acid transport system permease YP_050240.1 2448198 D 218491 CDS YP_050241.1 50121074 2883953 2449772..2450872 1 NC_004547.2 Similar to Yersinia pestis branched-chain amino acid transport system, permease component ypo1189 SWALL:Q8ZGT8 (EMBL:AJ414147) (358 aa) fasta scores: E(): 1.8e-115, 85.95% id in 356 aa, and to Pseudomonas aeruginosa probable permease of ABC transporter pa4860 SWALL:Q9HUV3 (EMBL:AE004899) (359 aa) fasta scores: E(): 6.2e-107, 78.49% id in 358 aa; branched-chain amino acid transport system permease 2450872 2883953 ECA2146 Pectobacterium atrosepticum SCRI1043 branched-chain amino acid transport system permease YP_050241.1 2449772 D 218491 CDS YP_050242.1 50121075 2883954 2450865..2451701 1 NC_004547.2 Similar to Yersinia pestis ABC transport ATP-binding subunit ypo1190 or y2999 SWALL:Q8ZGT7 (EMBL:AJ414147) (278 aa) fasta scores: E(): 3.4e-72, 80% id in 255 aa, and to Pseudomonas aeruginosa probable ATP-binding component of ABC transporter pa4861 SWALL:Q9HUV2 (EMBL:AE004899) (285 aa) fasta scores: E(): 3e-66, 77.82% id in 248 aa; ABC transporter ATP-binding protein 2451701 2883954 ECA2147 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_050242.1 2450865 D 218491 CDS YP_050243.1 50121076 2883955 2451703..2452401 1 NC_004547.2 Similar to Yersinia pestis ABC transport ATP-binding subunit ypo1191 SWALL:Q8ZGT6 (EMBL:AJ414147) (232 aa) fasta scores: E(): 7.4e-67, 78.44% id in 232 aa, and to Pseudomonas putida branched-chain amino acid ABC transporter, ATP-binding protein, pp4845 SWALL:AAN70414 (EMBL:AE016792) (232 aa) fasta scores: E(): 6.4e-68, 81.03% id in 232 aa; ABC transporter ATP-binding protein 2452401 2883955 ECA2148 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_050243.1 2451703 D 218491 CDS YP_050244.1 50121077 2883956 2452532..2452981 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1620 or y1780 SWALL:AAM85348 (EMBL:AJ414149) (137 aa) fasta scores: E(): 4.4e-14, 32.11% id in 137 aa, and to Rhizobium loti hypothetical protein Mlr7056 SWALL:Q987H0 (EMBL:AP003010) (136 aa) fasta scores: E(): 10, 27.95% id in 93 aa; hypothetical protein 2452981 2883956 ECA2149 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050244.1 2452532 D 218491 CDS YP_050245.1 50121078 2883884 2453337..2453636 1 NC_004547.2 Similar to Leptospira interrogans conserved hypothetical protein la0782 SWALL:AAN47981 (EMBL:AE011264) (106 aa) fasta scores: E(): 7e-07, 39.02% id in 82 aa, and to Borrelia burgdorferi conserved hypothetical protein bbu09 SWALL:Q9S022 (EMBL:AE001582) (106 aa) fasta scores: E(): 3.3e-06, 33.33% id in 78 aa; hypothetical protein 2453636 2883884 ECA2150 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050245.1 2453337 D 218491 CDS YP_050246.1 50121079 2883885 complement(2453709..>2453852) 1 NC_004547.2 Partial CDS. Similar to the C-terminal regions of several including Bradyrhizobium japonicum amino acid ABC transporter ATP-binding protein blr2226 SWALL:BAC47491 (EMBL:AP005943) (243 aa) fasta scores: E(): 4e-07, 57.69% id in 52 aa, and to Agrobacterium tumefaciens ABC transporter, nucleotide binding/ATPase protein atu3417 or agr_l_2810 SWALL:Q8UAF7 (EMBL:AE009272) (592 aa) fasta scores: E(): 8.5e-07, 53.84% id in 52 aa; amino acid ABC transporter ATP-binding protein >2453852 2883885 ECA2151 Pectobacterium atrosepticum SCRI1043 amino acid ABC transporter ATP-binding protein YP_050246.1 2453709 R 218491 CDS YP_050247.1 50121080 2883886 complement(2453948..2454742) 1 NC_004547.2 Similar to Methanosarcina acetivorans methylase ma3534 SWALL:Q8TK82 (EMBL:AE011062) (241 aa) fasta scores: E(): 1.7e-10, 26.01% id in 246 aa, and to Agrobacterium tumefaciens methyltransferase atu1041 or agr_c_1920 SWALL:Q8UGJ6 (EMBL:AE009068) (244 aa) fasta scores: E(): 6.4e-09, 30.18% id in 222 aa; hypothetical protein 2454742 2883886 ECA2152 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050247.1 2453948 R 218491 CDS YP_050248.1 50121081 2883825 complement(2455088..2455912) 1 NC_004547.2 Similar to Agrobacterium tumefaciens ABC transporter, nucleotide binding/ATPase protein atu3417 or agr_l_2810 SWALL:Q8UAF7 (EMBL:AE009272) (592 aa) fasta scores: E(): 3.1e-57, 66.91% id in 266 aa, and to Rhizobium meliloti probable ABC transporter, ATP-binding protein ra1185 or sma2195 SWALL:Q92XQ9 (EMBL:AE007304) (254 aa) fasta scores: E(): 1.2e-48, 60.64% id in 249 aa; ABC transporter ATP-binding protein 2455912 2883825 ECA2153 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_050248.1 2455088 R 218491 CDS YP_050249.1 50121082 2883826 complement(2455934..2456878) 1 NC_004547.2 Similar to Rhizobium meliloti ABC transporter, permease ra1186 or sma2197 SWALL:Q92XQ8 (EMBL:AE007304) (304 aa) fasta scores: E(): 5e-36, 39.6% id in 303 aa, and to Agrobacterium tumefaciens ABC transporter, nucleotide binding/ATPase protein atu3417 or agr_l_2810 SWALL:Q8UAF7 (EMBL:AE009272) (592 aa) fasta scores: E(): 3.1e-61, 57.86% id in 299 aa; ABC transporter permease 2456878 2883826 ECA2154 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_050249.1 2455934 R 218491 CDS YP_050250.1 50121083 2883827 complement(2456957..2457511) 1 NC_004547.2 Similar to Streptomyces coelicolor acetyltransferase sco3175 or sce87.26 SWALL:Q9RKB2 (EMBL:AL939115) (161 aa) fasta scores: E(): 2e-09, 36.09% id in 133 aa, and to Agrobacterium tumefaciens acetyltransferase atu3418 or agr_l_2808 SWALL:Q8UAF6 (EMBL:AE009272) (181 aa) fasta scores: E(): 3.9e-25, 50.29% id in 169 aa; acetyltransferase 2457511 2883827 ECA2155 Pectobacterium atrosepticum SCRI1043 acetyltransferase YP_050250.1 2456957 R 218491 CDS YP_050251.1 50121084 2883799 complement(2457599..2458582) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 cystine-binding periplasmic protein precursor FliY or b1920 or c2335 SWALL:FLIY_ECOLI (SWALL:P39174) (266 aa) fasta scores: E(): 1.3e-09, 29.87% id in 231 aa, and to Agrobacterium tumefaciens ABC transporter, substrate binding protein atu3416 or agr_l_2811 SWALL:Q8UAF8 (EMBL:AE009272) (312 aa) fasta scores: E(): 3.4e-50, 50.16% id in 307 aa; ABC transporter substrate binding protein 2458582 2883799 ECA2156 Pectobacterium atrosepticum SCRI1043 ABC transporter substrate binding protein YP_050251.1 2457599 R 218491 CDS YP_050252.1 50121085 2883800 complement(2458678..2459613) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 cystine-binding periplasmic protein precursor FliY or b1920 or c2335 SWALL:FLIY_ECOLI (SWALL:P39174) (266 aa) fasta scores: E(): 2.1e-09, 28.69% id in 237 aa, and to Agrobacterium tumefaciens ABC transporter, substrate binding protein atu3416 or agr_l_2811 SWALL:Q8UAF8 (EMBL:AE009272) (312 aa) fasta scores: E(): 1.6e-49, 49.67% id in 304 aa; ABC transporter substrate binding protein 2459613 2883800 ECA2157 Pectobacterium atrosepticum SCRI1043 ABC transporter substrate binding protein YP_050252.1 2458678 R 218491 CDS YP_050253.1 50121086 2883801 complement(2459636..2460964) 1 NC_004547.2 Similar to Listeria monocytogenes hypothetical protein Lmo2343 SWALL:Q8Y4T9 (EMBL:AL591983) (440 aa) fasta scores: E(): 5.7e-99, 56.72% id in 439 aa, and to Pseudomonas syringae monooxygenase, ntaa/snaa/soxa family pspto2425 SWALL:AAO55934 (EMBL:AE016864) (448 aa) fasta scores: E(): 1.6e-98, 56.65% id in 436 aa; hypothetical protein 2460964 2883801 ECA2158 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050253.1 2459636 R 218491 CDS YP_050254.1 50121087 2881633 2461266..2461811 1 NC_004547.2 Similar to Escherichia coli 4-hydroxyphenylacetate 3-monooxygenase, reductase component HpaC SWALL:HPAC_ECOLI (SWALL:Q57501) (170 aa) fasta scores: E(): 1.8e-19, 41.66% id in 156 aa, and to Escherichia coli flavin:NADH reductase ycdh or b1007 SWALL:YCDH_ECOLI (SWALL:P75893) (164 aa) fasta scores: E(): 5e-35, 60.37% id in 159 aa; 4-hydroxyphenylacetate 3-monooxygenase, reductase component 2461811 hpaC 2881633 hpaC Pectobacterium atrosepticum SCRI1043 4-hydroxyphenylacetate 3-monooxygenase, reductase component YP_050254.1 2461266 D 218491 CDS YP_050255.1 50121088 2883796 complement(2462086..2463282) 1 NC_004547.2 Similar to Zymomonas mobilis amino acid amido hydrolase SWALL:Q9FDK6 (EMBL:AF212041) (380 aa) fasta scores: E(): 2.3e-79, 55.93% id in 379 aa, and to Bacillus subtilis hypothetical protein yxep yxep or lp9H SWALL:YXEP_BACSU (SWALL:P54955) (380 aa) fasta scores: E(): 3.7e-69, 48.41% id in 378 aa; peptidase 2463282 2883796 ECA2160 Pectobacterium atrosepticum SCRI1043 peptidase YP_050255.1 2462086 R 218491 CDS YP_050256.1 50121089 2883797 2463567..2464547 1 NC_004547.2 Similar to Agrobacterium tumefaciens hypothetical protein atu3421 or agr_l_2803 SWALL:Q8UAF3 (EMBL:AE009272) (335 aa) fasta scores: E(): 1.2e-59, 52.92% id in 325 aa, and to Bacillus subtilis hypothetical protein YtmO SWALL:YTMO_BACSU (SWALL:O34846) (334 aa) fasta scores: E(): 1.3e-44, 44.47% id in 326 aa; luciferase-like monooxygenase 2464547 2883797 ECA2161 Pectobacterium atrosepticum SCRI1043 luciferase-like monooxygenase YP_050256.1 2463567 D 218491 CDS YP_050257.1 50121090 2883798 2464656..2465162 1 NC_004547.2 Similar to Escherichia coli hypothetical 19.6 kDa protein SWALL:Q9L910 (EMBL:AF188737) (172 aa) fasta scores: E(): 3.2e-32, 50.29% id in 167 aa, and to Shewanella oneidensis conserved hypothetical protein so1764 SWALL:AAN54818 (EMBL:AE015620) (171 aa) fasta scores: E(): 8.2e-25, 43.97% id in 166 aa; hypothetical protein 2465162 2883798 ECA2162 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050257.1 2464656 D 218491 CDS YP_050258.1 50121091 2883762 2466052..2468013 1 NC_004547.2 Similar to Pseudomonas aeruginosa PapB protein SWALL:Q9F3Y1 (EMBL:AJ277639) (673 aa) fasta scores: E(): 9.1e-146, 57.05% id in 652 aa, and to Escherichia coli alkaline phosphatase isozyme conversion protein precursor Iap or b2753 SWALL:IAP_ECOLI (SWALL:P10423) (345 aa) fasta scores: E(): 4e-24, 35.67% id in 342 aa; autotransporter 2468013 2883762 ECA2163 Pectobacterium atrosepticum SCRI1043 autotransporter YP_050258.1 2466052 D 218491 CDS YP_050259.1 50121092 2884107 complement(2468109..2469152) 1 NC_004547.2 Similar to Escherichia coli cryptic asc operon repressor AscG or b2714 SWALL:ASCG_ECOLI (SWALL:P24242) (336 aa) fasta scores: E(): 7.3e-78, 64.34% id in 331 aa; asc operon repressor 2469152 ascG 2884107 ascG Pectobacterium atrosepticum SCRI1043 asc operon repressor YP_050259.1 2468109 R 218491 CDS YP_050260.1 50121093 2884112 2469486..2470946 1 NC_004547.2 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system cellobiose/arbutin/salicin-specific transporter subunit IIBC 2470946 ascF 2884112 ascF Pectobacterium atrosepticum SCRI1043 PTS system cellobiose/arbutin/salicin-specific transporter subunit IIBC YP_050260.1 2469486 D 218491 CDS YP_050261.1 50121094 2884111 2470978..2472408 1 NC_004547.2 Similar to Escherichia coli 6-phospho-beta-glucosidase AscB or b2716 SWALL:ASCB_ECOLI (SWALL:P24240) (474 aa) fasta scores: E(): 1.2e-171, 83.26% id in 472 aa; cryptic 6-phospho-beta-glucosidase 2472408 ascB 2884111 ascB Pectobacterium atrosepticum SCRI1043 cryptic 6-phospho-beta-glucosidase YP_050261.1 2470978 D 218491 CDS YP_050262.1 50121095 2883763 2472640..2473437 1 NC_004547.2 Similar to Rhizobium loti N-amidino-scyllo-inosamine-4-phosphate phosphatase mll6642 SWALL:Q988Q3 (EMBL:AP003009) (239 aa) fasta scores: E(): 3.3e-47, 56.39% id in 211 aa, and to Agrobacterium rhizogenes Riorf69 protein riorf69 SWALL:Q9KWB5 (EMBL:AB039932) (263 aa) fasta scores: E(): 4e-44, 48.3% id in 265 aa; inositol monophosphatase 2473437 2883763 ECA2167 Pectobacterium atrosepticum SCRI1043 inositol monophosphatase YP_050262.1 2472640 D 218491 CDS YP_050263.1 50121096 2883764 2473501..2473887 1 NC_004547.2 Similar to Listeria monocytogenes hypothetical protein Lmo0406 SWALL:Q8Y9W3 (EMBL:AL591975) (126 aa) fasta scores: E(): 3e-16, 43.3% id in 127 aa, and to Bacillus subtilis hypothetical protein YyaH SWALL:YYAH_BACSU (SWALL:P37516) (126 aa) fasta scores: E(): 8.2e-14, 36.22% id in 127 aa; hypothetical protein 2473887 2883764 ECA2168 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050263.1 2473501 D 218491 CDS YP_050264.1 50121097 2883765 2473904..2474320 1 NC_004547.2 hypothetical protein 2474320 2883765 ECA2169 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050264.1 2473904 D 218491 CDS YP_050265.1 50121098 2883703 complement(2474317..2475462) 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c3243 SWALL:AAN81695 (EMBL:AE016765) (370 aa) fasta scores: E(): 3.8e-47, 38.31% id in 355 aa, and to Clostridium acetobutylicum polya polymerase related protein cac0753 SWALL:Q97L13 (EMBL:AE007591) (363 aa) fasta scores: E(): 4e-41, 35.24% id in 349 aa; hypothetical protein 2475462 2883703 ECA2170 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050265.1 2474317 R 218491 CDS YP_050266.1 50121099 2883704 complement(2475468..2476352) 1 NC_004547.2 Similar to Clostridium acetobutylicum homolog of eukaryotic DNA ligase iii cac0752 SWALL:Q97L14 (EMBL:AE007591) (265 aa) fasta scores: E(): 1.4e-47, 46.71% id in 259 aa; hypothetical protein 2476352 2883704 ECA2171 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050266.1 2475468 R 218491 CDS YP_050267.1 50121100 2883705 2476854..2477447 1 NC_004547.2 hypothetical protein 2477447 2883705 ECA2172 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050267.1 2476854 D 218491 CDS YP_050268.1 50121101 2883678 2477692..2478756 1 NC_004547.2 Similar to Xylella fastidiosa outer membrane protein xf1739 SWALL:Q9PCN9 (EMBL:AE003997) (385 aa) fasta scores: E(): 1.2e-61, 43.09% id in 355 aa, and to Xanthomonas axonopodis hypothetical protein Xac0250 SWALL:Q8PQS2 (EMBL:AE011649) (351 aa) fasta scores: E(): 1.5e-45, 38.16% id in 338 aa; hypothetical protein 2478756 2883678 ECA2173 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050268.1 2477692 D 218491 CDS YP_050269.1 50121102 2883679 complement(2479015..2479443) 1 NC_004547.2 Similar to Pseudomonas syringae conserved hypothetical protein pspto5207 SWALL:AAO58633 (EMBL:AE016874) (131 aa) fasta scores: E(): 1.1, 28.57% id in 77 aa; hypothetical protein 2479443 2883679 ECA2174 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050269.1 2479015 R 218491 CDS YP_050270.1 50121103 2883680 complement(2479530..2479928) 1 NC_004547.2 Similar to Rhizobium leguminosarum urease-associated hypothetical protein SWALL:Q8RPY4 (EMBL:AF347070) (135 aa) fasta scores: E(): 1.3e-07, 31.2% id in 125 aa, and to Agrobacterium tumefaciens hypothetical protein atu2403 or agr_c_4360 SWALL:Q8UCT0 (EMBL:AE009188) (141 aa) fasta scores: E(): 2.8e-07, 29.13% id in 127 aa; hypothetical protein 2479928 2883680 ECA2175 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050270.1 2479530 R 218491 CDS YP_050271.1 50121104 2883608 complement(2479939..2480340) 1 NC_004547.2 hypothetical protein 2480340 2883608 ECA2176 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050271.1 2479939 R 218491 CDS YP_050272.1 50121105 2883610 <2480847..2481182 1 NC_004547.2 Partial CDS. Similar to several phage integrases including Escherichia coli prophage Cp4-57 integrase inta or slpa or intx or b2622 SWALL:INTA_ECOLI (SWALL:P32053) (413 aa) fasta scores: E(): 6.1e-17, 65.88% id in 85 aa, and to Yersinia pestis prophage integrase ypo1098 SWALL:Q8ZH15 (EMBL:AJ414146) (399 aa) fasta scores: E(): 1.4e-19, 70.11% id in 87 aa; prophage integrase (partial) 2481182 2883610 ECA2178 Pectobacterium atrosepticum SCRI1043 prophage integrase (partial) YP_050272.1 <2480847 D 218491 CDS YP_050273.1 50121106 2883589 2481464..2481994 1 NC_004547.2 hypothetical protein 2481994 2883589 ECA2179 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050273.1 2481464 D 218491 CDS YP_050274.1 50121107 2883590 2481997..2484267 1 NC_004547.2 hypothetical protein 2484267 2883590 ECA2180 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050274.1 2481997 D 218491 CDS YP_050275.1 50121108 2883591 complement(2484489..2484836) 1 NC_004547.2 Similar to Bacteriophage P4 polarity suppression protein Psu SWALL:VPSU_BPP4 (SWALL:P05460) (190 aa) fasta scores: E(): 6.4e-14, 49.02% id in 102 aa, and to Salmonella typhi phage polarity suppression protein sty4825 SWALL:Q8Z108 (EMBL:AL627283) (188 aa) fasta scores: E(): 9.5e-15, 51.51% id in 99 aa; bacteriophage polarity suppression protein 2484836 2883591 ECA2181 Pectobacterium atrosepticum SCRI1043 bacteriophage polarity suppression protein YP_050275.1 2484489 R 218491 CDS YP_050276.1 50121109 2883564 complement(2485016..2486065) 1 NC_004547.2 Similar to Escherichia coli O157:H7 integrase protein for prophage cp-933i z0324 or ecs0289 SWALL:Q8X7K7 (EMBL:AE005203) (410 aa) fasta scores: E(): 6.8e-46, 40.35% id in 337 aa, and to Yersinia pestis integrase int or ypo0887 or y3271 SWALL:AAM86821 (EMBL:AJ414145) (404 aa) fasta scores: E(): 5.8e-48, 41.12% id in 338 aa; prophage integrase 2486065 2883564 ECA2182 Pectobacterium atrosepticum SCRI1043 prophage integrase YP_050276.1 2485016 R 218491 CDS YP_050277.1 50121110 2883565 complement(2486231..2487322) 1 NC_004547.2 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 2487322 2883565 ECA2183 Pectobacterium atrosepticum SCRI1043 GTP-dependent nucleic acid-binding protein EngD YP_050277.1 2486231 R 218491 CDS YP_050278.1 50121111 2881867 complement(2487452..2488039) 1 NC_004547.2 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 2488039 pth 2881867 pth Pectobacterium atrosepticum SCRI1043 peptidyl-tRNA hydrolase YP_050278.1 2487452 R 218491 CDS YP_050279.1 50121112 2883566 2488352..2488621 1 NC_004547.2 YchH; transcription activated by CRP (cyclic AMP receptor protein), a global transcription factor involved in regulation of metabolism in enteric bacteria; ychH presents a class II promoter to bind CRP; unknown function; hypothetical protein 2488621 2883566 ECA2185 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050279.1 2488352 D 218491 CDS YP_050280.1 50121113 2882532 complement(2488785..2489732) 1 NC_004547.2 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 2489732 prs 2882532 prs Pectobacterium atrosepticum SCRI1043 ribose-phosphate pyrophosphokinase YP_050280.1 2488785 R 218491 CDS YP_050281.1 50121114 2882184 complement(2489870..2490742) 1 NC_004547.2 An essential enzyme in the nonmevalonate pathway of isopentenyl diphosphate and dimethylallyl diphosphate biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2490742 ipk 2882184 ipk Pectobacterium atrosepticum SCRI1043 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_050281.1 2489870 R 218491 CDS YP_050282.1 50121115 2885581 complement(2490745..2491368) 1 NC_004547.2 Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; outer membrane lipoprotein LolB 2491368 lolB 2885581 lolB Pectobacterium atrosepticum SCRI1043 outer membrane lipoprotein LolB YP_050282.1 2490745 R 218491 CDS YP_050283.1 50121116 2885594 2491599..2492855 1 NC_004547.2 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 2492855 hemA 2885594 hemA Pectobacterium atrosepticum SCRI1043 glutamyl-tRNA reductase YP_050283.1 2491599 D 218491 CDS YP_050284.1 50121117 2882306 2492889..2493971 1 NC_004547.2 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 2493971 prfA 2882306 prfA Pectobacterium atrosepticum SCRI1043 peptide chain release factor 1 YP_050284.1 2492889 D 218491 CDS YP_050285.1 50121118 2882906 2493971..2494816 1 NC_004547.2 HemK; PrmC; transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2494816 hemK 2882906 hemK Pectobacterium atrosepticum SCRI1043 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_050285.1 2493971 D 218491 CDS YP_050286.1 50121119 2884387 2494828..2495223 1 NC_004547.2 Similar to Escherichia coli protein SirB2 or b1213 SWALL:SIB2_ECOLI (SWALL:Q46755) (130 aa) fasta scores: E(): 2.3e-16, 44.61% id in 130 aa, and to Salmonella typhimurium, and Salmonella typhi protein SirB2 or stm1774 or sty1899 SWALL:SIB2_SALTY (SWALL:Q9XCQ2) (129 aa) fasta scores: E(): 4.7e-20, 55% id in 120 aa; hypothetical protein 2495223 sirB2 2884387 sirB2 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050286.1 2494828 D 218491 CDS YP_050287.1 50121120 2884386 2495226..2496035 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 protein SirB1 or b1214 or z1985 or ecs1719 SWALL:SIB1_ECOLI (SWALL:P20101) (269 aa) fasta scores: E(): 8.3e-71, 66.17% id in 269 aa; transcriptional regulator 2496035 sirB1 2884386 sirB1 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_050287.1 2495226 D 218491 CDS YP_050288.1 50121121 2884536 2496092..2496946 1 NC_004547.2 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 2496946 kdsA 2884536 kdsA Pectobacterium atrosepticum SCRI1043 2-dehydro-3-deoxyphosphooctonate aldolase YP_050288.1 2496092 D 218491 CDS YP_050289.1 50121122 2883567 complement(join(2497077..2497340,2497344..>2497514)) 1 NC_004547.2 Similar to the C-terminal regions of many including Escherichia coli transposase insg for insertion sequence element IS4 InsG or b4278 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 1.8e-36, 69.23% id in 143 aa; transposase for insertion sequence element IS4 (partial) 2497340 2883567 ECA2195 Pectobacterium atrosepticum SCRI1043 transposase for insertion sequence element IS4 (partial) YP_050289.1 2497077 R 218491 CDS YP_050290.1 50121123 2884273 complement(2497516..>2497770) 1 NC_004547.2 Partial CDS. Similar to the C-terminal regions of many transposases including Escherichia coli transposase for transposon Tn1721 TnpA SWALL:TNP9_ECOLI (SWALL:P51565) (988 aa) fasta scores: E(): 6.4e-25, 83.75% id in 80 aa; transposase transposon Tn1721 (partial) >2497770 tnpA 2884273 tnpA Pectobacterium atrosepticum SCRI1043 transposase transposon Tn1721 (partial) YP_050290.1 2497516 R 218491 CDS YP_050291.1 50121124 2883555 join(<2497761..2497904,2497904..2498068) 1 NC_004547.2 Similar to the C-terminal region of Xanthomonas campestris VirB6 protein or xcc3294 SWALL:Q8P5P2 (EMBL:AE012446) (373 aa) fasta scores: E(): 0.14, 31.19% id in 109 aa; hypothetical protein 2498068 2883555 ECA2198 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050291.1 <2497761 D 218491 CDS YP_050292.1 50121125 2883556 2498108..2498629 1 NC_004547.2 Similar to Xanthomonas campestris hypothetical protein Xcc3128 SWALL:Q8P649 (EMBL:AE012428) (182 aa) fasta scores: E(): 1.4e-09, 35.35% id in 181 aa; lipoprotein 2498629 2883556 ECA2199 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_050292.1 2498108 D 218491 CDS YP_050293.1 50121126 2883557 2498626..2499375 1 NC_004547.2 Similar to Xanthomonas axonopodis hypothetical protein Xac0467 SWALL:Q8PQ61 (EMBL:AE011674) (265 aa) fasta scores: E(): 3.8e-27, 40.09% id in 217 aa; hypothetical protein 2499375 2883557 ECA2200 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050293.1 2498626 D 218491 CDS YP_050294.1 50121127 2883533 complement(2499415..2499981) 1 NC_004547.2 Similar to the C-terminal regions of several including Comamonas acidovorans Orf4 SWALL:Q8RS31 (EMBL:AB049198) (323 aa) fasta scores: E(): 1.3e-42, 81.2% id in 133 aa, and to Synechococcus elongatus Tll0382 protein tll0382 SWALL:BAC07934 (EMBL:AP005370) (330 aa) fasta scores: E(): 6.9e-22, 53.98% id in 113 aa; integrase 2499981 2883533 ECA2201 Pectobacterium atrosepticum SCRI1043 integrase YP_050294.1 2499415 R 218491 CDS YP_050295.1 50121128 2881278 complement(2499998..>2500471) 1 NC_004547.2 Similar to the N-terminal regions of several transposases including Escherichia coli transposase InsG for insertion sequence element IS4 InsG or b4278 SWALL:INSG_ECOLI (SWALL:P03835) (442 aa) fasta scores: E(): 1.6e-46, 74.32% id in 148 aa, and to Shigella flexneri IS4 orf s0243 SWALL:Q9AFL8 (EMBL:AF348706) (439 aa) fasta scores: E(): 1.6e-46, 74.32% id in 148 aa; transposase for insertion sequence element IS4 (partial) >2500471 insG 2881278 insG Pectobacterium atrosepticum SCRI1043 transposase for insertion sequence element IS4 (partial) YP_050295.1 2499998 R 218491 CDS YP_050296.1 50121129 2883534 complement(2500620..2501573) 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo2305 or y2136 SWALL:Q8ZE77 (EMBL:AJ414151) (317 aa) fasta scores: E(): 2.4e-78, 69.9% id in 319 aa, and to Shigella flexneri orf, conserved hypothetical protein sf1625 SWALL:AAN43208 (EMBL:AE015183) (314 aa) fasta scores: E(): 8.2e-74, 67.82% id in 317 aa; hypothetical protein 2501573 2883534 ECA2203 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050296.1 2500620 R 218491 CDS YP_050297.1 50121130 2883241 2502156..2503685 1 NC_004547.2 forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; NAD(P) transhydrogenase subunit alpha 2503685 pntA 2883241 pntA Pectobacterium atrosepticum SCRI1043 NAD(P) transhydrogenase subunit alpha YP_050297.1 2502156 D 218491 CDS YP_050298.1 50121131 2883187 2503696..2505084 1 NC_004547.2 catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-stereospecific enzyme; pyridine nucleotide transhydrogenase 2505084 pntB 2883187 pntB Pectobacterium atrosepticum SCRI1043 pyridine nucleotide transhydrogenase YP_050298.1 2503696 D 218491 CDS YP_050299.1 50121132 2883535 complement(2505289..2506239) 1 NC_004547.2 with UspC and UspD is involved in resistance to UV irradiation; universal stress protein UspE 2506239 2883535 ECA2206 Pectobacterium atrosepticum SCRI1043 universal stress protein UspE YP_050299.1 2505289 R 218491 CDS YP_050300.1 50121133 2882538 complement(2506430..2507176) 1 NC_004547.2 Global transcription factor that controls the expression of over 100 target genes in response to anoxia; fumarate/nitrate reduction transcriptional regulator 2507176 fnr 2882538 fnr Pectobacterium atrosepticum SCRI1043 fumarate/nitrate reduction transcriptional regulator YP_050300.1 2506430 R 218491 CDS YP_050301.1 50121134 2883543 complement(2507444..2507977) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri methylated-DNA--protein-cysteine methyltransferase Ogt or b1335 or sf1835 SWALL:OGT_ECOLI (SWALL:P09168) (171 aa) fasta scores: E(): 2.8e-38, 59.76% id in 169 aa. Also similar to ECA2454 (40.331% id. in 181 aa overlap); methylated-DNA--protein-cysteine methyltransferase 2507977 ogt 2883543 ogt Pectobacterium atrosepticum SCRI1043 methylated-DNA--protein-cysteine methyltransferase YP_050301.1 2507444 R 218491 CDS YP_050302.1 50121135 2883530 2508508..2509803 1 NC_004547.2 Similar to Oceanobacillus iheyensis hypothetical conserved protein ob2083 SWALL:BAC14039 (EMBL:AP004600) (426 aa) fasta scores: E(): 1.9e-114, 62.97% id in 424 aa, and to Rhizobium meliloti oxidoreductase protein r00123 or smc04129 SWALL:Q92T57 (EMBL:AL591782) (433 aa) fasta scores: E(): 2.9e-46, 41.68% id in 427 aa; oxidoreductase 2509803 2883530 ECA2209 Pectobacterium atrosepticum SCRI1043 oxidoreductase YP_050302.1 2508508 D 218491 CDS YP_050303.1 50121136 2883531 2509912..2511231 1 NC_004547.2 Similar to Erwinia chrysanthemi periplasmic binding protein precursor TogB SWALL:Q93KB7 (EMBL:AJ305144) (430 aa) fasta scores: E(): 5.9e-79, 49.29% id in 428 aa, and to Yersinia pestis sugar-binding protein ypo1719 or TogB or y1881 SWALL:AAM85448 (EMBL:AJ414150) (430 aa) fasta scores: E(): 2.2e-79, 49.52% id in 422 aa. Also similar to ECA2406(TogB) (50.117% id) and to ECA3551 (47.442% id); periplasmic-binding protein 2511231 2883531 ECA2210 Pectobacterium atrosepticum SCRI1043 periplasmic-binding protein YP_050303.1 2509912 D 218491 CDS YP_050304.1 50121137 2883532 complement(2511298..2511822) 1 NC_004547.2 copper-zinc superoxide dismutase 2511822 2883532 ECA2211 Pectobacterium atrosepticum SCRI1043 copper-zinc superoxide dismutase YP_050304.1 2511298 R 218491 CDS YP_050305.1 50121138 2883527 complement(2511876..2513105) 1 NC_004547.2 Similar to Vibrio cholerae cyclopropane-fatty-acyl-phospholipid synthase vc1122 SWALL:Q9KSY4 (EMBL:AE004192) (432 aa) fasta scores: E(): 3e-82, 55.76% id in 364 aa, and to Shewanella oneidensis cyclopropane-fatty-acyl-phospholipid synthase Cfa or so3379 SWALL:AAN56377 (EMBL:AE015774) (418 aa) fasta scores: E(): 3.1e-77, 49.75% id in 408 aa; cyclopropane-fatty-acyl-phospholipid synthase 2513105 2883527 ECA2212 Pectobacterium atrosepticum SCRI1043 cyclopropane-fatty-acyl-phospholipid synthase YP_050305.1 2511876 R 218491 CDS YP_050306.1 50121139 2883528 complement(2513102..2513827) 1 NC_004547.2 Similar to Vibrio vulnificus conserved hypothetical protein vv12933 SWALL:AAO11265 (EMBL:AE016806) (255 aa) fasta scores: E(): 8.4e-49, 49.37% id in 241 aa, and to Pseudomonas putida conserved hypothetical protein pp2735 SWALL:AAN68343 (EMBL:AE016784) (269 aa) fasta scores: E(): 8.5e-32, 41.39% id in 244 aa; hypothetical protein 2513827 2883528 ECA2213 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050306.1 2513102 R 218491 CDS YP_050307.1 50121140 2883529 complement(2513820..2515088) 1 NC_004547.2 Similar to Vibrio cholerae hypothetical protein Vc1120 SWALL:Q9KSY6 (EMBL:AE004192) (426 aa) fasta scores: E(): 7.9e-99, 58.33% id in 420 aa, and to Shewanella oneidensis conserved hypothetical protein so3381 SWALL:AAN56379 (EMBL:AE015774) (416 aa) fasta scores: E(): 9.4e-90, 56.25% id in 416 aa; amine oxidoreductase 2515088 2883529 ECA2214 Pectobacterium atrosepticum SCRI1043 amine oxidoreductase YP_050307.1 2513820 R 218491 CDS YP_050308.1 50121141 2883473 complement(2515094..2515801) 1 NC_004547.2 Similar to Vibrio vulnificus dehydrogenase vv12935 SWALL:AAO11267 (EMBL:AE016806) (241 aa) fasta scores: E(): 2.9e-42, 50.84% id in 236 aa, and to Pseudomonas putida oxidoreductase, short-chain dehydrogenase/reductase family pp2737 SWALL:AAN68345 (EMBL:AE016784) (250 aa) fasta scores: E(): 3.7e-28, 42.21% id in 244 aa; short-chain dehydrogenase 2515801 2883473 ECA2215 Pectobacterium atrosepticum SCRI1043 short-chain dehydrogenase YP_050308.1 2515094 R 218491 CDS YP_050309.1 50121142 2883474 complement(2515807..2516286) 1 NC_004547.2 Similar to Vibrio vulnificus transcriptional regulator vv12936 SWALL:Q8D8N5 (EMBL:AE016806) (139 aa) fasta scores: E(): 7.7e-20, 43.28% id in 134 aa, and to Pseudomonas syringae conserved hypothetical protein pspto1120 SWALL:AAO54649 (EMBL:AE016859) (140 aa) fasta scores: E(): 3.5e-17, 38.97% id in 136 aa; hypothetical protein 2516286 2883474 ECA2216 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050309.1 2515807 R 218491 CDS YP_050310.1 50121143 2884354 complement(2516544..2519006) 1 NC_004547.2 Similar to Salmonella typhimurium SrfC or stm1595 SWALL:Q9KIJ8 (EMBL:AF231758) (714 aa) fasta scores: E(): 4.2e-23, 30.06% id in 795 aa, and to Yersinia pestis virulence factor y2123 SWALL:AAM85685 (EMBL:AE013815) (846 aa) fasta scores: E(): 2.9e-65, 55.12% id in 849 aa; virulence factor 2519006 srfC 2884354 srfC Pectobacterium atrosepticum SCRI1043 virulence factor YP_050310.1 2516544 R 218491 CDS YP_050311.1 50121144 2884359 complement(2519003..2521990) 1 NC_004547.2 Similar to Salmonella typhimurium SrfB or stm1594 SWALL:Q9KIJ9 (EMBL:AF231758) (993 aa) fasta scores: E(): 0, 57.47% id in 997 aa, and to Yersinia pestis virulence factor ypo2290 SWALL:Q8ZE92 (EMBL:AJ414151) (1023 aa) fasta scores: E(): 2.1e-214, 73.8% id in 1027 aa; virulence effector protein 2521990 srfB 2884359 srfB Pectobacterium atrosepticum SCRI1043 virulence effector protein YP_050311.1 2519003 R 218491 CDS YP_050312.1 50121145 2884358 complement(2521993..2523372) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi SrfA or sty1472 SWALL:Q9KIK0 (EMBL:AF231758) (399 aa) fasta scores: E(): 2.4e-16, 41.06% id in 431 aa, and to Yersinia pestis virulence factor y2121 SWALL:AAM85682 (EMBL:AE013815) (477 aa) fasta scores: E(): 4.2e-29, 51.02% id in 488 aa; virulence effector protein 2523372 srfA 2884358 srfA Pectobacterium atrosepticum SCRI1043 virulence effector protein YP_050312.1 2521993 R 218491 CDS YP_050313.1 50121146 2883475 complement(2523662..2524351) 1 NC_004547.2 Similar to Bacillus subtilis YoaJ SWALL:O34918 (EMBL:AF027868) (232 aa) fasta scores: E(): 4.2e-47, 53.61% id in 235 aa, and to the C-terminal region of Clavibacter michiganensis subsp. sepedonicus cellulase cela SWALL:Q9AF65 (EMBL:AY007311) (727 aa) fasta scores: E(): 2.6e-09, 30.52% id in 190 aa; cellulase 2524351 2883475 ECA2220 Pectobacterium atrosepticum SCRI1043 cellulase YP_050313.1 2523662 R 218491 CDS YP_050314.1 50121147 2882725 2524682..2525110 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri osmotically inducible protein C OsmC or b1482 or sf1743 SWALL:OSMC_ECOLI (SWALL:P23929) (142 aa) fasta scores: E(): 4.2e-45, 87.14% id in 140 aa; osmotically inducible protein C 2525110 osmC 2882725 osmC Pectobacterium atrosepticum SCRI1043 osmotically inducible protein C YP_050314.1 2524682 D 218491 CDS YP_050315.1 50121148 2883174 2525399..2525785 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 soluble cytochrome b562 precursor CybC or b4236 or z5846 or ecs5213 SWALL:C562_ECOLI (SWALL:P00192) (128 aa) fasta scores: E(): 2.6e-07, 30.46% id in 128 aa, and to Yersinia pestis probable soluble cytochrome b562 2 precursor CybC2 or CybC or ypo3694 or y0169 SWALL:C563_YERPE (SWALL:Q8ZAU2) (128 aa) fasta scores: E(): 4e-07, 31.25% id in 128 aa; soluble cytochrome b562 2525785 cybC 2883174 cybC Pectobacterium atrosepticum SCRI1043 soluble cytochrome b562 YP_050315.1 2525399 D 218491 CDS YP_050316.1 50121149 2883476 2525893..2526447 1 NC_004547.2 Similar to Streptomyces coelicolor TetR-family transcriptional regulatory protein sco4461 or scd65.04C SWALL:Q9F2S8 (EMBL:AL939120) (185 aa) fasta scores: E(): 3e-25, 42.68% id in 164 aa, and to Escherichia coli hypothetical protein ybjk or b0846 SWALL:YBJK_ECOLI (SWALL:P75811) (178 aa) fasta scores: E(): 5.6e-19, 38.69% id in 168 aa; TetR family transcriptional regulator 2526447 2883476 ECA2223 Pectobacterium atrosepticum SCRI1043 TetR family transcriptional regulator YP_050316.1 2525893 D 218491 CDS YP_050317.1 50121150 2883461 2526583..2527779 1 NC_004547.2 Similar to Salmonella typhimurium transport protein stm0868 SWALL:Q8ZQK6 (EMBL:AE008736) (403 aa) fasta scores: E(): 1.8e-64, 46.83% id in 395 aa, and to Escherichia coli hypothetical protein ybjj ybjj or b0845 SWALL:YBJJ_ECOLI (SWALL:P75810) (402 aa) fasta scores: E(): 9.3e-64, 46.26% id in 402 aa; transporter 2527779 2883461 ECA2224 Pectobacterium atrosepticum SCRI1043 transporter YP_050317.1 2526583 D 218491 CDS YP_050318.1 50121151 2883462 2527929..2528417 1 NC_004547.2 Similar to Listeria monocytogenes hypothetical protein Lmo0624 SWALL:Q8Y9A8 (EMBL:AL591976) (147 aa) fasta scores: E(): 2.1e-11, 37.08% id in 151 aa, and to Bacillus subtilis YycN protein yycN SWALL:O32293 (EMBL:Z99124) (156 aa) fasta scores: E(): 2.5e-10, 31.41% id in 156 aa; acetyltransferase 2528417 2883462 ECA2225 Pectobacterium atrosepticum SCRI1043 acetyltransferase YP_050318.1 2527929 D 218491 CDS YP_050319.1 50121152 2883463 2528538..2528708 1 NC_004547.2 hypothetical protein 2528708 2883463 ECA2225A Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050319.1 2528538 D 218491 CDS YP_050320.1 50121153 2883412 2528725..2530560 1 NC_004547.2 Similar to Escherichia coli methyl-accepting chemotaxis protein II Tar or CheM or b1886 SWALL:MCP2_ECOLI (SWALL:P07017) (553 aa) fasta scores: E(): 1.4e-48, 50.98% id in 355 aa, and to Ralstonia solanacearum methyl-accepting chemotaxis transmembrane protein rsc0606 or rs06104 SWALL:Q8Y1T3 (EMBL:AL646060) (617 aa) fasta scores: E(): 1.2e-54, 39.73% id in 594 aa; methyl-accepting chemotaxis protein 2530560 2883412 ECA2226 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_050320.1 2528725 D 218491 CDS YP_050321.1 50121154 2883413 2530749..2531648 1 NC_004547.2 specific inhibitor of chromosomal initiation of replication in vitro; inds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 2531648 2883413 ECA2227 Pectobacterium atrosepticum SCRI1043 chromosome replication initiation inhibitor protein YP_050321.1 2530749 D 218491 CDS YP_050322.1 50121155 2883414 complement(2531645..2531911) 1 NC_004547.2 Similar to Escherichia coli hypothetical protein yjbd or b4023 SWALL:YJBD_ECOLI (SWALL:P32685) (90 aa) fasta scores: E(): 1.2e-16, 65.9% id in 88 aa, and to Salmonella enterica subsp. enterica serovar Typhi Ty2 hypothetical protein SWALL:AAO71585 (EMBL:AE016848) (90 aa) fasta scores: E(): 1.3e-16, 63.63% id in 88 aa; hypothetical protein 2531911 2883414 ECA2228 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050322.1 2531645 R 218491 CDS YP_050323.1 50121156 2883396 2532270..2532398 1 NC_004547.2 hypothetical protein 2532398 2883396 ECA2229 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050323.1 2532270 D 218491 CDS YP_050324.1 50121157 2883397 complement(2532528..2533646) 1 NC_004547.2 Similar to Escherichia coli O6 oxidoreductase c0409 SWALL:AAN78890 (EMBL:AE016756) (329 aa) fasta scores: E(): 3.6e-62, 56.27% id in 311 aa, and to Oceanobacillus iheyensis NADH-dependent flavin oxidoreductase ob3315 SWALL:BAC15271 (EMBL:AP004604) (373 aa) fasta scores: E(): 4.8e-55, 42.81% id in 369 aa; NADH-dependent flavin oxidoreductase 2533646 2883397 ECA2230 Pectobacterium atrosepticum SCRI1043 NADH-dependent flavin oxidoreductase YP_050324.1 2532528 R 218491 CDS YP_050325.1 50121158 2883398 complement(2533659..2534552) 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein ycjy c1801 SWALL:Q8FHQ8 (EMBL:AE016760) (310 aa) fasta scores: E(): 3.8e-49, 47.11% id in 295 aa, and to Vibrio parahaemolyticus hypothetical protein vp1677 SWALL:BAC59940 (EMBL:AP005078) (339 aa) fasta scores: E(): 1.9e-45, 46.23% id in 292 aa; hypothetical protein 2534552 2883398 ECA2231 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050325.1 2533659 R 218491 CDS YP_050326.1 50121159 2883347 complement(2534900..2535796) 1 NC_004547.2 Similar to Bradyrhizobium japonicum transcriptional regulatory protein blr5548 SWALL:BAC50813 (EMBL:AP005955) (297 aa) fasta scores: E(): 1.5e-69, 61.01% id in 295 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp1471 or rs03073 SWALL:Q8XQ15 (EMBL:AL646085) (297 aa) fasta scores: E(): 2.1e-64, 57.14% id in 294 aa; LysR family transcriptional regulator 2535796 2883347 ECA2232 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_050326.1 2534900 R 218491 CDS YP_050327.1 50121160 2883348 complement(2535825..2536745) 1 NC_004547.2 Similar to uncultured bacterium esterase SWALL:Q9KIU0 (EMBL:AF223648) (438 aa) fasta scores: E(): 5.5e-34, 42.48% id in 306 aa, and to Clostridium acetobutylicum carboxyl esterase, a/b hydrolase cap0097 SWALL:Q97TK4 (EMBL:AE001438) (299 aa) fasta scores: E(): 1e-42, 42.12% id in 292 aa; hydrolase 2536745 2883348 ECA2233 Pectobacterium atrosepticum SCRI1043 hydrolase YP_050327.1 2535825 R 218491 CDS YP_050328.1 50121161 2883349 complement(2536813..2537412) 1 NC_004547.2 Similar to Xanthomonas axonopodis hypothetical protein Xac2153 SWALL:Q8PKL8 (EMBL:AE011852) (196 aa) fasta scores: E(): 3.6e-35, 45.69% id in 186 aa, and to Saccharomyces cerevisiae hypothetical 22.0 kDa protein in hxt11-hxt8 intergenic region yjl217w or j0226 or hrc198 SWALL:YJV7_YEAST (SWALL:P40893) (198 aa) fasta scores: E(): 1.2e-33, 45.83% id in 192 aa; hypothetical protein 2537412 2883349 ECA2234 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050328.1 2536813 R 218491 CDS YP_050329.1 50121162 2883309 complement(2537430..2537795) 1 NC_004547.2 Similar to Pseudomonas putida conserved hypothetical protein pp2987 SWALL:AAN68595 (EMBL:AE016785) (187 aa) fasta scores: E(): 2.1e-33, 70.24% id in 121 aa, and to Rhizobium loti hypothetical protein Mll2592 SWALL:Q98I32 (EMBL:AP003000) (182 aa) fasta scores: E(): 6.4e-17, 49.56% id in 115 aa; transcriptional regulator 2537795 2883309 ECA2235 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_050329.1 2537430 R 218491 CDS YP_050330.1 50121163 2883310 <2538347..>2538544 1 NC_004547.2 Similar to the C-terminal regions of several including Agrobacterium tumefaciens short-chain dehydrogenase atu5444 or agr_pat_651 SWALL:Q8UJN2 (EMBL:AE008965) (287 aa) fasta scores: E(): 7.5e-08, 50% id in 60 aa, and to Pseudomonas sp. short chain dehydrogenase orf65 SWALL:Q936Z5 (EMBL:U66917) (147 aa) fasta scores: E(): 3.2e-07, 50% id in 60 aa; short-chain dehydrogenase (partial) >2538544 2883310 ECA2235A Pectobacterium atrosepticum SCRI1043 short-chain dehydrogenase (partial) YP_050330.1 <2538347 D 218491 CDS YP_050331.1 50121164 2883311 2538647..2539090 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein Pa2120 SWALL:Q9I1Z5 (EMBL:AE004639) (142 aa) fasta scores: E(): 7.7e-15, 43.41% id in 129 aa, and to Ralstonia solanacearum hypothetical protein rsp0317 or rs05451 SWALL:Q8XT00 (EMBL:AL646078) (147 aa) fasta scores: E(): 6.5e-12, 36.5% id in 126 aa; hypothetical protein 2539090 2883311 ECA2236 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050331.1 2538647 D 218491 CDS YP_050332.1 50121165 2882536 2539270..2539632 1 NC_004547.2 Similar to Escherichia coli protein FlxA or b1566 SWALL:FLXA_ECOLI (SWALL:P77609) (110 aa) fasta scores: E(): 0.0012, 34.74% id in 118 aa, and to Shigella flexneri orf, conserved hypothetical protein sf2463 SWALL:AAN43970 (EMBL:AE015262) (113 aa) fasta scores: E(): 3.1e-06, 43.39% id in 106 aa; hypothetical protein 2539632 flxA 2882536 flxA Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050332.1 2539270 D 218491 CDS YP_050333.1 50121166 2883312 complement(2539822..2540028) 1 NC_004547.2 Similar to Rhizobium loti hypothetical protein Msl2237 SWALL:Q98IV1 (EMBL:AP002999) (74 aa) fasta scores: E(): 2.4e-18, 67.64% id in 68 aa; hypothetical protein 2540028 2883312 ECA2238 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050333.1 2539822 R 218491 CDS YP_050334.1 50121167 2883225 2540218..2540505 1 NC_004547.2 Similar to Erwinia pyrifoliae conserved hypothetical protein SWALL:AAN04552 (EMBL:AY123045) (94 aa) fasta scores: E(): 2.6e-22, 66.31% id in 95 aa, and to Yersinia pestis hypothetical protein ypo1157 or y3025 SWALL:Q8ZGW6 (EMBL:AJ414146) (81 aa) fasta scores: E(): 2.7e-16, 63.51% id in 74 aa; hypothetical protein 2540505 2883225 ECA2239 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050334.1 2540218 D 218491 CDS YP_050335.1 50121168 2883226 2540511..2541806 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri hypothetical lipoprotein yddw precursor yddw or b1491 or z2217 or ecs2096 or sf1736 SWALL:YDDW_ECOLI (SWALL:P76130) (439 aa) fasta scores: E(): 1.2e-134, 77.33% id in 428 aa, and to Yersinia pestis lipoprotein ypo2538 or y1649 SWALL:Q8ZDM4 (EMBL:AJ414152) (427 aa) fasta scores: E(): 6.7e-102, 61.03% id in 426 aa; lipoprotein 2541806 2883226 ECA2240 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_050335.1 2540511 D 218491 CDS YP_050336.1 50121169 2883227 complement(2541855..2542190) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein y5172 or y1074 or ypmt1.69 SWALL:Q9ZGZ3 (EMBL:AF074611) (108 aa) fasta scores: E(): 1.5e-24, 61.9% id in 105 aa, and to Salmonella typhimurium inner membrane protein stm2507 SWALL:Q8ZN63 (EMBL:AE008813) (78 aa) fasta scores: E(): 3e-09, 60.31% id in 63 aa; hypothetical protein 2542190 2883227 ECA2241 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050336.1 2541855 R 218491 CDS YP_050337.1 50121170 2883206 complement(2542221..2542454) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypmt1.68A ypmt1.68A SWALL:Q9RIC5 (EMBL:AL117211) (75 aa) fasta scores: E(): 4e-22, 84% id in 75 aa, and to Xanthomonas axonopodis hypothetical protein Xac0080 SWALL:Q8PR83 (EMBL:AE011631) (85 aa) fasta scores: E(): 0.0015, 38.46% id in 78 aa; hypothetical protein 2542454 2883206 ECA2242 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050337.1 2542221 R 218491 CDS YP_050338.1 50121171 2885141 2542867..2544249 1 NC_004547.2 catalyzes the reversible formation of diaminobutyrate and 2-oxoglutarate from glutamate and L-aspartic beta-semialdehyde; diaminobutyrate--2-oxoglutarate aminotransferase 2544249 dat 2885141 dat Pectobacterium atrosepticum SCRI1043 diaminobutyrate--2-oxoglutarate aminotransferase YP_050338.1 2542867 D 218491 CDS YP_050339.1 50121172 2884754 2544268..2545785 1 NC_004547.2 Similar to Acinetobacter baumannii L-2,4-diaminobutyrate decarboxylase Ddc SWALL:DDC_ACIBA (SWALL:Q43908) (510 aa) fasta scores: E(): 3.1e-101, 54.06% id in 492 aa, and to Enterobacter aerogenes L-2,4-diaminobutyrate decarboxylase Ddc SWALL:Q9S0P8 (EMBL:AB032468) (490 aa) fasta scores: E(): 2.4e-161, 83.77% id in 487 aa; L-2,4-diaminobutyrate decarboxylase 2545785 ddc 2884754 ddc Pectobacterium atrosepticum SCRI1043 L-2,4-diaminobutyrate decarboxylase YP_050339.1 2544268 D 218491 CDS YP_050340.1 50121173 2883207 complement(2545857..2546087) 1 NC_004547.2 4-OT; member of subfamily 5; forms a dimer; the function in the Escherichia coli cell is unknown; 4-oxalocrotonate tautomerase 2546087 2883207 ECA2245 Pectobacterium atrosepticum SCRI1043 4-oxalocrotonate tautomerase YP_050340.1 2545857 R 218491 CDS YP_050341.1 50121174 2883208 2546335..2547111 1 NC_004547.2 Similar to Escherichia coli O157:H7 hypothetical protein z0443 or ecs0400 SWALL:Q8X682 (EMBL:AE005214) (262 aa) fasta scores: E(): 7.5e-55, 53.1% id in 258 aa, and to Pseudomonas aeruginosa conserved hypothetical protein SWALL:AAN62260 (EMBL:AF440524) (256 aa) fasta scores: E(): 3e-53, 54.51% id in 255 aa; hypothetical protein 2547111 2883208 ECA2246 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050341.1 2546335 D 218491 CDS YP_050342.1 50121175 2883133 2547155..2548117 1 NC_004547.2 Similar to Escherichia coli O157:H7 AraC-like transcriptional regulator z0442 or ecs0399 SWALL:Q8X683 (EMBL:AE005214) (317 aa) fasta scores: E(): 1.5e-74, 57.64% id in 314 aa, and to Pseudomonas aeruginosa transcriptional regulator SWALL:AAN62262 (EMBL:AF440524) (332 aa) fasta scores: E(): 7.5e-68, 55.01% id in 309 aa; AraC family transcriptional regulator 2548117 2883133 ECA2247 Pectobacterium atrosepticum SCRI1043 AraC family transcriptional regulator YP_050342.1 2547155 D 218491 CDS YP_050343.1 50121176 2883134 2548323..2549147 1 NC_004547.2 catalyzes the hydrolysis of mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate; mannosyl-3-phosphoglycerate phosphatase 2549147 2883134 ECA2248 Pectobacterium atrosepticum SCRI1043 mannosyl-3-phosphoglycerate phosphatase YP_050343.1 2548323 D 218491 CDS YP_050344.1 50121177 2883135 2549178..2550395 1 NC_004547.2 Similar to Halobacterium sp. Vng0271C SWALL:Q9HSE4 (EMBL:AE004989) (364 aa) fasta scores: E(): 4.4e-26, 33.24% id in 364 aa; hypothetical protein 2550395 2883135 ECA2249 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050344.1 2549178 D 218491 CDS YP_050345.1 50121178 2883024 2550693..2551877 1 NC_004547.2 Similar to Xanthomonas campestris histidinol-phosphate aminotransferase hisc or xcc3275 SWALL:Q8P5R1 (EMBL:AE012444) (399 aa) fasta scores: E(): 2.9e-27, 31.33% id in 367 aa, and to Pseudomonas fluorescens aminotransferase qbsB SWALL:AAL65284 (EMBL:AY072690) (363 aa) fasta scores: E(): 1.1e-26, 32.2% id in 354 aa; aminotransferase 2551877 2883024 ECA2250 Pectobacterium atrosepticum SCRI1043 aminotransferase YP_050345.1 2550693 D 218491 CDS YP_050346.1 50121179 2883025 2551896..2552087 1 NC_004547.2 hypothetical protein 2552087 2883025 ECA2251 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050346.1 2551896 D 218491 CDS YP_050347.1 50121180 2883026 2552084..2552833 1 NC_004547.2 NADP(+)-dependent; catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine; can also use 3-hydroxybutyrate, 3-hydroxy-isobutyrate, D-threonine, L-allo-threonine,D-serine; 3-hydroxy acid dehydrogenase 2552833 2883026 ECA2252 Pectobacterium atrosepticum SCRI1043 3-hydroxy acid dehydrogenase YP_050347.1 2552084 D 218491 CDS YP_050348.1 50121181 2885647 2553108..2553458 1 NC_004547.2 Similar to Yersinia pseudotuberculosis hypothetical 14.2 kDa protein orf9 SWALL:Q93AP0 (EMBL:AF418982) (124 aa) fasta scores: E(): 8.4e-19, 45.52% id in 123 aa, and to Salmonella typhimurium, and Salmonella typhi periplasmic protein ynfb or stm1503 or sty1560 SWALL:Q8XEU2 (EMBL:AE008765) (113 aa) fasta scores: E(): 3.1e-18, 52.52% id in 99 aa; hypothetical protein 2553458 2885647 ECA2253 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050348.1 2553108 D 218491 CDS YP_050349.1 50121182 2885648 2553611..2554228 1 NC_004547.2 lipoprotein 2554228 2885648 ECA2254 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_050349.1 2553611 D 218491 CDS YP_050350.1 50121183 2885649 2554334..2554633 1 NC_004547.2 Similar to Escherichia coli O157:H7 orf, hypothetical protein z2573 or ecs2292 SWALL:Q8X798 (EMBL:AE005382) (102 aa) fasta scores: E(): 1.2e-14, 55.44% id in 101 aa, and to Salmonella typhimurium outer membrane protein ynfd or stm1500 SWALL:Q8ZPJ5 (EMBL:AE008765) (102 aa) fasta scores: E(): 5.2e-14, 56.98% id in 93 aa; hypothetical protein 2554633 2885649 ECA2255 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050350.1 2554334 D 218491 CDS YP_050351.1 50121184 2885650 complement(2554698..2556170) 1 NC_004547.2 Similar to Listeria monocytogenes hypothetical protein Lmo0981 SWALL:Q8Y8C7 (EMBL:AL591977) (491 aa) fasta scores: E(): 1.8e-54, 36.23% id in 483 aa, and to Clostridium acetobutylicum permease, mdr related cap0131 SWALL:Q97TH0 (EMBL:AE001438) (489 aa) fasta scores: E(): 2.2e-51, 34.31% id in 475 aa; transporter 2556170 2885650 ECA2256 Pectobacterium atrosepticum SCRI1043 transporter YP_050351.1 2554698 R 218491 CDS YP_050352.1 50121185 2882954 complement(2556274..2556939) 1 NC_004547.2 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 2556939 bioD 2882954 bioD Pectobacterium atrosepticum SCRI1043 dithiobiotin synthetase YP_050352.1 2556274 R 218491 CDS YP_050353.1 50121186 2882955 complement(2557073..2558290) 1 NC_004547.2 Similar to Escherichia coli Mlc protein Mlc or b1594 SWALL:MLC_ECOLI (SWALL:P50456) (406 aa) fasta scores: E(): 1.3e-113, 71.92% id in 406 aa, and to Yersinia pestis rok family transcriptional regulatory protein mlc or ypo2268 SWALL:Q8ZEB4 (EMBL:AJ414151) (405 aa) fasta scores: E(): 7.4e-131, 81.72% id in 405 aa; transcriptional regulator 2558290 2882955 ECA2258 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_050353.1 2557073 R 218491 CDS YP_050354.1 50121187 2882956 complement(2558525..2559421) 1 NC_004547.2 Similar to Salmonella typhi regulatory protein sty1578 SWALL:Q8Z6X7 (EMBL:AL627270) (299 aa) fasta scores: E(): 3.5e-66, 60.81% id in 296 aa, and to Yersinia pestis transcriptional regulator LysR-type y2109 SWALL:AAM85672 (EMBL:AE013813) (307 aa) fasta scores: E(): 1e-72, 69.61% id in 283 aa; LysR family transcriptional regulator 2559421 2882956 ECA2259 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_050354.1 2558525 R 218491 CDS YP_050355.1 50121188 2882832 2559536..2560804 1 NC_004547.2 Similar to Escherichia coli hypothetical transport protein ynfm or b1596 SWALL:YNFM_ECOLI (SWALL:P43531) (417 aa) fasta scores: E(): 3.4e-109, 71.29% id in 411 aa, and to Salmonella typhimurium, and Salmonella typhi mfs familty transport protein ynfm or stm1486 or sty1579 SWALL:Q8XH12 (EMBL:AE008764) (417 aa) fasta scores: E(): 2.3e-108, 72.23% id in 407 aa; transporter 2560804 2882832 ECA2260 Pectobacterium atrosepticum SCRI1043 transporter YP_050355.1 2559536 D 218491 CDS YP_050356.1 50121189 2884228 2560976..2561911 1 NC_004547.2 binds to DNA replication terminator sequences to prevent passage of replication forks; DNA replication terminus site-binding protein 2561911 tus 2884228 tus Pectobacterium atrosepticum SCRI1043 DNA replication terminus site-binding protein YP_050356.1 2560976 D 218491 CDS YP_050357.1 50121190 2883459 complement(2561970..2563367) 1 NC_004547.2 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 2563367 fumC 2883459 fumC Pectobacterium atrosepticum SCRI1043 fumarate hydratase YP_050357.1 2561970 R 218491 CDS YP_050358.1 50121191 2881336 2563607..2564779 1 NC_004547.2 Similar to Escherichia coli mannose-6-phosphate isomerase ManA or Pmi or b1613 SWALL:MANA_ECOLI (SWALL:P00946) (391 aa) fasta scores: E(): 1e-110, 71.28% id in 390 aa; mannose-6-phosphate isomerase 2564779 manA 2881336 manA Pectobacterium atrosepticum SCRI1043 mannose-6-phosphate isomerase YP_050358.1 2563607 D 218491 CDS YP_050359.1 50121192 2882833 2564898..2566448 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein ydga or c2006 SWALL:AAN80466 (EMBL:AE016761) (502 aa) fasta scores: E(): 3.5e-65, 38.67% id in 512 aa, and to Shigella flexneri orf, conserved hypothetical protein ydga or sf1637 SWALL:AAN43220 (EMBL:AE015185) (502 aa) fasta scores: E(): 3.5e-65, 38.67% id in 512 aa; hypothetical protein 2566448 2882833 ECA2264 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050359.1 2564898 D 218491 CDS YP_050360.1 50121193 2882834 2566550..2567527 1 NC_004547.2 Similar to Pseudomonas resinovorans efflux pump SWALL:BAC41699 (EMBL:AB088420) (319 aa) fasta scores: E(): 4.4e-44, 44.08% id in 313 aa, and to Pseudomonas putida transporter, bile acid/na+ symporter family pp0670 SWALL:AAN66295 (EMBL:AE016776) (317 aa) fasta scores: E(): 6.3e-48, 46.45% id in 310 aa; hypothetical protein 2567527 2882834 ECA2265 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050360.1 2566550 D 218491 CDS YP_050361.1 50121194 2883901 2567649..2568662 1 NC_004547.2 catalyzes the formation of inosine from adenosine; adenosine deaminase 2568662 add 2883901 add Pectobacterium atrosepticum SCRI1043 adenosine deaminase YP_050361.1 2567649 D 218491 CDS YP_050362.1 50121195 2882774 complement(2568764..2569222) 1 NC_004547.2 Similar to Brucella suis conserved hypothetical protein br1163 SWALL:AAN30083 (EMBL:AE014417) (164 aa) fasta scores: E(): 2.7e-30, 58.06% id in 155 aa, and to Ralstonia solanacearum hypothetical signal peptide protein rsp1443 or rs03100 SWALL:Q8XQ43 (EMBL:AL646084) (158 aa) fasta scores: E(): 6.4e-26, 56.81% id in 132 aa; hypothetical protein 2569222 2882774 ECA2267 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050362.1 2568764 R 218491 CDS YP_050363.1 50121196 2882775 complement(2569453..2570445) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo2260 or y2102 SWALL:Q8ZEC0 (EMBL:AJ414151) (342 aa) fasta scores: E(): 2e-105, 85.84% id in 325 aa, and to Escherichia coli hypothetical protein yfeh or b2410 SWALL:YFEH_ECOLI (SWALL:P39836) (332 aa) fasta scores: E(): 9.4e-79, 66.97% id in 324 aa; sodium bile acid symporter 2570445 2882775 ECA2268 Pectobacterium atrosepticum SCRI1043 sodium bile acid symporter YP_050363.1 2569453 R 218491 CDS YP_050364.2 161501875 2882776 complement(2570592..2571638) 1 NC_004547.2 Similar to Shigella flexneri orf, conserved hypothetical protein ydgj or sf1649 SWALL:AAN43231 (EMBL:AE015186) (359 aa) fasta scores: E(): 2.1e-97, 70.57% id in 350 aa, and to Escherichia coli hypothetical oxidoreductase ydgj or b1624 SWALL:YDGJ_ECOLI (SWALL:P77376) (346 aa) fasta scores: E(): 1.5e-96, 71.01% id in 345 aa; oxidoreductase 2571638 2882776 ECA2269 Pectobacterium atrosepticum SCRI1043 oxidoreductase YP_050364.2 2570592 R 218491 CDS YP_050365.1 50121198 2884160 complement(2571753..2572685) 1 NC_004547.2 positive and negative regulator; regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose; DNA-binding transcriptional regulator AraC 2572685 araC 2884160 araC Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional regulator AraC YP_050365.1 2571753 R 218491 CDS YP_050366.1 50121199 2884158 complement(2572751..2573737) 1 NC_004547.2 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter permease 2573737 araH 2884158 araH Pectobacterium atrosepticum SCRI1043 L-arabinose transporter permease YP_050366.1 2572751 R 218491 CDS YP_050367.1 50121200 2884157 complement(2573756..2575279) 1 NC_004547.2 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; L-arabinose transporter ATP-binding protein 2575279 araG 2884157 araG Pectobacterium atrosepticum SCRI1043 L-arabinose transporter ATP-binding protein YP_050367.1 2573756 R 218491 CDS YP_050368.1 50121201 2884162 complement(2575376..2576359) 1 NC_004547.2 Similar to Escherichia coli L-arabinose-binding periplasmic protein precursor AraF or b1901 SWALL:ARAF_ECOLI (SWALL:P02924) (329 aa) fasta scores: E(): 1.4e-107, 89.87% id in 326 aa; L-arabinose-binding periplasmic protein 2576359 araF 2884162 araF Pectobacterium atrosepticum SCRI1043 L-arabinose-binding periplasmic protein YP_050368.1 2575376 R 218491 CDS YP_050369.1 50121202 2884165 2576733..2578418 1 NC_004547.2 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; ribulokinase 2578418 araB 2884165 araB Pectobacterium atrosepticum SCRI1043 ribulokinase YP_050369.1 2576733 D 218491 CDS YP_050370.1 50121203 2884164 2578455..2579960 1 NC_004547.2 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; L-arabinose isomerase 2579960 araA 2884164 araA Pectobacterium atrosepticum SCRI1043 L-arabinose isomerase YP_050370.1 2578455 D 218491 CDS YP_050371.1 50121204 2885038 2580340..2580921 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 electron transport complex protein RnfA or b1627 or c2019 or z2633 or ecs2336 SWALL:RNFA_ECOLI (SWALL:P76181) (193 aa) fasta scores: E(): 1.3e-58, 80.31% id in 193 aa, and to Yersinia pestis electron transport complex protein RnfA or ypo2246 or y2087 SWALL:RNFA_YERPE (SWALL:Q8ZEC8) (193 aa) fasta scores: E(): 4.1e-60, 81.86% id in 193 aa; Na(+)-translocating NADH-quinone reductase subunit E 2580921 rnfA 2885038 rnfA Pectobacterium atrosepticum SCRI1043 Na(+)-translocating NADH-quinone reductase subunit E YP_050371.1 2580340 D 218491 CDS YP_050372.1 50121205 2885039 2580921..2581499 1 NC_004547.2 part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfB 2581499 rnfB 2885039 rnfB Pectobacterium atrosepticum SCRI1043 electron transport complex protein RnfB YP_050372.1 2580921 D 218491 CDS YP_050373.1 50121206 2885040 2581492..2583573 1 NC_004547.2 part of membrane-bound complex thought to be involved in electron transport to nitrogen; electron transport complex protein RnfC 2583573 rnfC 2885040 rnfC Pectobacterium atrosepticum SCRI1043 electron transport complex protein RnfC YP_050373.1 2581492 D 218491 CDS YP_050374.1 50121207 2885041 2583574..2584629 1 NC_004547.2 RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents; electron transport complex protein RnfD 2584629 rnfD 2885041 rnfD Pectobacterium atrosepticum SCRI1043 electron transport complex protein RnfD YP_050374.1 2583574 D 218491 CDS YP_050375.1 50121208 2885036 2584640..2585269 1 NC_004547.2 part of membrane-bound complex hought to be involved in electron transport to nitrogen; electron transport complex protein RnfG 2585269 rnfG 2885036 rnfG Pectobacterium atrosepticum SCRI1043 electron transport complex protein RnfG YP_050375.1 2584640 D 218491 CDS YP_050376.1 50121209 2885035 2585266..2585973 1 NC_004547.2 in Excherichia coli RsxABCDEG reduces SoxR which turns off induction of SoxS transcription factor in the absence of oxidizing agents; similar to the rnfABCDGE operon in Rhodobacter capsulatus involved in transferring electrons to nitrogenase; electron transport complex RsxE subunit 2585973 rnfE 2885035 rnfE Pectobacterium atrosepticum SCRI1043 electron transport complex RsxE subunit YP_050376.1 2585266 D 218491 CDS YP_050377.1 50121210 2885415 2585970..2586605 1 NC_004547.2 DNA-(apurinic or apyrimidinic site) lyase; has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity; removed damaged DNA at cytosines, thymines and guanines; endonuclease III 2586605 nth 2885415 nth Pectobacterium atrosepticum SCRI1043 endonuclease III YP_050377.1 2585970 D 218491 CDS YP_050378.1 50121211 2882768 2587267..2588739 1 NC_004547.2 mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium; member of proton-dependent oligopeptide transport (POT) system family; in Escherichia coli this gene is regulated by OmpR although not via osmoregulation; tripeptide transporter permease 2588739 tppB 2882768 tppB Pectobacterium atrosepticum SCRI1043 tripeptide transporter permease YP_050378.1 2587267 D 218491 CDS YP_050379.1 50121212 2882243 complement(2588846..2589820) 1 NC_004547.2 LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; transcriptional regulator CysB 2589820 cysB 2882243 cysB Pectobacterium atrosepticum SCRI1043 transcriptional regulator CysB YP_050379.1 2588846 R 218491 CDS YP_050380.1 50121213 2882769 2589913..2590290 1 NC_004547.2 hypothetical protein 2590290 2882769 ECA2285 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050380.1 2589913 D 218491 CDS YP_050381.1 50121214 2884261 complement(2590532..2593132) 1 NC_004547.2 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 2593132 topA 2884261 topA Pectobacterium atrosepticum SCRI1043 DNA topoisomerase I YP_050381.1 2590532 R 218491 CDS YP_050382.1 50121215 2882770 2593459..2593728 1 NC_004547.2 Similar to Salmonella enterica subsp. enterica serovar Typhi Ty2 hypothetical protein SWALL:AAO69255 (EMBL:AE016839) (83 aa) fasta scores: E(): 3.7e-19, 66.26% id in 83 aa, and to Yersinia pestis hypothetical protein ypo2217 ypo2217 or y2058 SWALL:Q8ZEF6 (EMBL:AJ414151) (83 aa) fasta scores: E(): 5e-19, 71.42% id in 77 aa; hypothetical protein 2593728 2882770 ECA2287 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050382.1 2593459 D 218491 CDS YP_050383.2 229220652 2884374 complement(2593787..2594833) 1 NC_004547.2 SohB; periplasmic protein; member of the peptidase S49 family; periplasmic protease 2594833 sohB 2884374 sohB Pectobacterium atrosepticum SCRI1043 periplasmic protease YP_050383.2 2593787 R 218491 CDS YP_050384.1 50121217 2881687 2595189..2595950 1 NC_004547.2 Similar to Yersinia pestis short chain dehydrogenase ypo2215 SWALL:Q8ZEF8 (EMBL:AJ414151) (253 aa) fasta scores: E(): 4.9e-73, 75.49% id in 253 aa, and to Salmonella typhimurium, and Salmonella typhi oxoacyl- ycik or stm1717 or sty1333 SWALL:Q8XGU5 (EMBL:AE008776) (253 aa) fasta scores: E(): 1.2e-71, 74.3% id in 253 aa; short chain dehydrogenase 2595950 2881687 ECA2289 Pectobacterium atrosepticum SCRI1043 short chain dehydrogenase YP_050384.1 2595189 D 218491 CDS YP_050385.1 50121218 2882298 2595969..2596559 1 NC_004547.2 catalyzes the formation of adenosylcob(III)yrinic acid a,c-diamide from cob(I)yrinic acid a,c-diamide; cob(I)yrinic acid a,c-diamide adenosyltransferase 2596559 btuR 2882298 btuR Pectobacterium atrosepticum SCRI1043 cob(I)yrinic acid a,c-diamide adenosyltransferase YP_050385.1 2595969 D 218491 CDS YP_050386.1 50121219 2881688 complement(2596643..2597527) 1 NC_004547.2 catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA; 23S rRNA pseudouridylate synthase B 2597527 2881688 ECA2291 Pectobacterium atrosepticum SCRI1043 23S rRNA pseudouridylate synthase B YP_050386.1 2596643 R 218491 CDS YP_050387.1 50121220 2881689 complement(2597688..2598308) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2212 or y2053 SWALL:Q8ZEG1 (EMBL:AJ414151) (206 aa) fasta scores: E(): 8.9e-67, 85.36% id in 205 aa, and to Salmonella enterica subsp. enterica serovar Typhi Ty2 hypothetical protein SWALL:AAO69260 (EMBL:AE016839) (206 aa) fasta scores: E(): 4.7e-61, 77.67% id in 206 aa; hypothetical protein 2598308 2881689 ECA2292 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050387.1 2597688 R 218491 CDS YP_050388.1 50121221 2884236 complement(2598460..2599344) 1 NC_004547.2 Similar to Salmonella typhimurium protein TrpH or stm1721 SWALL:TRPH_SALTY (SWALL:O54453) (293 aa) fasta scores: E(): 1.3e-72, 68.75% id in 272 aa, and to Escherichia coli protein TrpH or b1266 SWALL:TRPH_ECOLI (SWALL:P77766) (293 aa) fasta scores: E(): 6.4e-73, 68.75% id in 272 aa; phosphoesterase 2599344 trpH 2884236 trpH Pectobacterium atrosepticum SCRI1043 phosphoesterase YP_050388.1 2598460 R 218491 CDS YP_050389.1 50121222 2881690 complement(2599460..2601298) 1 NC_004547.2 Similar to Pseudomonas putida beta-(1-3)-glucosyl transferase, pp1526 SWALL:AAN67147 (EMBL:AE016779) (863 aa) fasta scores: E(): 2.2e-39, 32.08% id in 455 aa, and to Synechococcus elongatus cellulose synthase tll0007 SWALL:BAC07560 (EMBL:AP005369) (736 aa) fasta scores: E(): 2.9e-18, 26.26% id in 552 aa; glycosyl transferase family protein 2601298 2881690 ECA2294 Pectobacterium atrosepticum SCRI1043 glycosyl transferase family protein YP_050389.1 2599460 R 218491 CDS YP_050390.1 50121223 2881875 2601617..2602654 1 NC_004547.2 Similar to Pseudomonas sp. 61-3 PhbR SWALL:Q9Z3Y6 (EMBL:AB014757) (379 aa) fasta scores: E(): 2.4e-41, 35.01% id in 337 aa, and to Azotobacter sp. FA8 PhaR protein PhaR SWALL:Q8KRE8 (EMBL:AJ496234) (369 aa) fasta scores: E(): 7.9e-33, 31.36% id in 338 aa; AraC family transcriptional regulator 2602654 2881875 ECA2295 Pectobacterium atrosepticum SCRI1043 AraC family transcriptional regulator YP_050390.1 2601617 D 218491 CDS YP_050391.1 50121224 2884240 2602958..2604520 1 NC_004547.2 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 2604520 trpE 2884240 trpE Pectobacterium atrosepticum SCRI1043 anthranilate synthase component I YP_050391.1 2602958 D 218491 CDS YP_050392.1 50121225 2884235 2604520..2605098 1 NC_004547.2 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 2605098 trpG 2884235 trpG Pectobacterium atrosepticum SCRI1043 anthranilate synthase component II YP_050392.1 2604520 D 218491 CDS YP_050393.2 161501874 2884239 2605182..2606180 1 NC_004547.2 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 2606180 trpD 2884239 trpD Pectobacterium atrosepticum SCRI1043 anthranilate phosphoribosyltransferase YP_050393.2 2605182 D 218491 CDS YP_050394.1 50121227 2884238 2606188..2607555 1 NC_004547.2 monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 2607555 trpC 2884238 trpC Pectobacterium atrosepticum SCRI1043 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase YP_050394.1 2606188 D 218491 CDS YP_050395.1 50121228 2884243 2607572..2608762 1 NC_004547.2 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 2608762 trpB 2884243 trpB Pectobacterium atrosepticum SCRI1043 tryptophan synthase subunit beta YP_050395.1 2607572 D 218491 CDS YP_050396.1 50121229 2884242 2608762..2609568 1 NC_004547.2 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 2609568 trpA 2884242 trpA Pectobacterium atrosepticum SCRI1043 tryptophan synthase subunit alpha YP_050396.1 2608762 D 218491 CDS YP_050397.1 50121230 2881876 2609954..2610685 1 NC_004547.2 Similar to Erwinia chrysanthemi oligogalacturonate-specific porin KdgM precursor kdgM SWALL:KDGM_ERWCH (SWALL:Q934G3) (236 aa) fasta scores: E(): 9.9e-56, 58.84% id in 243 aa. Also similar to ECA2407 (KdgM) (59.259% id).; oligogalacturonate-specific porin 2610685 2881876 ECA2302 Pectobacterium atrosepticum SCRI1043 oligogalacturonate-specific porin YP_050397.1 2609954 D 218491 CDS YP_050398.1 50121231 2883315 complement(2610838..2611473) 1 NC_004547.2 receptor for colicin S4; outer membrane protein W 2611473 ompW 2883315 ompW Pectobacterium atrosepticum SCRI1043 outer membrane protein W YP_050398.1 2610838 R 218491 CDS YP_050399.1 50121232 2881877 complement(2611538..2611729) 1 NC_004547.2 Similar to Amsacta moorei entomopoxvirus Amv188 amv188 SWALL:Q9EML7 (EMBL:AF250284) (60 aa) fasta scores: E(): 1.4, 43.9% id in 41 aa; hypothetical protein 2611729 2881877 ECA2304 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050399.1 2611538 R 218491 CDS YP_050400.1 50121233 2882486 2611821..2612573 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo2199 or y2042 SWALL:Q8ZEH4 (EMBL:AJ414151) (256 aa) fasta scores: E(): 8.8e-50, 55.42% id in 249 aa, and to Salmonella typhimurium inner membrane protein ycic or stm1734 SWALL:Q8ZP49 (EMBL:AE008777) (247 aa) fasta scores: E(): 9.6e-49, 55.82% id in 249 aa; hypothetical protein 2612573 2882486 ECA2305 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050400.1 2611821 D 218491 CDS YP_050401.1 50121234 2882487 2612727..2614289 1 NC_004547.2 Similar to Shigella flexneri orf, hypothetical protein sf1608 SWALL:AAN43192 (EMBL:AE015182) (345 aa) fasta scores: E(): 1.1e-57, 55.21% id in 326 aa, and to Salmonella typhi possible integrase sty3193 SWALL:Q8Z3Y1 (EMBL:AL627277) (548 aa) fasta scores: E(): 2.6e-09, 30.68% id in 528 aa; phage integrase 2614289 2882487 ECA2306 Pectobacterium atrosepticum SCRI1043 phage integrase YP_050401.1 2612727 D 218491 CDS YP_050402.1 50121235 2882488 2614333..2614647 1 NC_004547.2 Similar to an internal region of Bacteriophage T7 protein kinase 0.7 SWALL:KIPA_BPT7 (SWALL:) (359 aa) fasta scores: E(): 0.08, 34% id in 100 aa; phage-like protein 2614647 2882488 ECA2307 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_050402.1 2614333 D 218491 CDS YP_050403.1 50121236 2881822 2614681..2615379 1 NC_004547.2 Similar to Culex nigripalpus baculovirus Cun001 bro protein, atp_gtp_a motif, similar to acmnpv orf 2 cun001 SWALL:Q919R4 (EMBL:AF403738) (593 aa) fasta scores: E(): 0.047, 23.98% id in 246 aa, and to Spodoptera frugiperda ascovirus 1 av1-bro-l10 protein SWALL:Q8JJX7 (EMBL:AJ312699) (268 aa) fasta scores: E(): 0.092, 23.92% id in 209 aa; phage-like protein 2615379 2881822 ECA2308 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_050403.1 2614681 D 218491 CDS YP_050404.1 50121237 2881823 2616138..2616857 1 NC_004547.2 Similar to Bacteriophage HK620 DNA-binding protein RoI roI SWALL:Q9AZ12 (EMBL:AF335538) (240 aa) fasta scores: E(): 4, 24.53% id in 216 aa, and to Shigella flexneri orf, partial conserved hypothetical protein sf2861 SWALL:AAN44347 (EMBL:AE015300) (248 aa) fasta scores: E(): 2.1e-49, 58.92% id in 241 aa; phage-like protein 2616857 2881823 ECA2309 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_050404.1 2616138 D 218491 CDS YP_050405.1 50121238 2881824 2616854..2617060 1 NC_004547.2 hypothetical protein 2617060 2881824 ECA2310 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050405.1 2616854 D 218491 CDS YP_050406.1 50121239 2881656 2617183..2617593 1 NC_004547.2 Similar to Vibrio cholerae orf28 SWALL:Q9L984 (EMBL:AF179596) (135 aa) fasta scores: E(): 1.6, 30.39% id in 102 aa, and to Salmonella typhi hypothetical protein Sty3189 sty3189 SWALL:Q8Z3Y4 (EMBL:AL627277) (163 aa) fasta scores: E(): 1.2, 25.58% id in 129 aa; hypothetical protein 2617593 2881656 ECA2311 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050406.1 2617183 D 218491 CDS YP_050407.1 50121240 2881657 2617692..2618834 1 NC_004547.2 Weakly similar to Shigella flexneri orf, conserved hypothetical protein sf2859 SWALL:AAN44345 (EMBL:AE015300) (329 aa) fasta scores: E(): 9.8e-18, 30.19% id in 308 aa, and to Salmonella typhi hypothetical protein Sty3188 sty3188 SWALL:Q8Z3Y5 (EMBL:AL627277) (327 aa) fasta scores: E(): 5.9e-08, 30.19% id in 308 aa; hypothetical protein 2618834 2881657 ECA2312 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050407.1 2617692 D 218491 CDS YP_050408.1 50121241 2881578 2619430..2619996 1 NC_004547.2 Involved in cell division; probably involved in intracellular septation; intracellular septation protein A 2619996 ispZ 2881578 ispZ Pectobacterium atrosepticum SCRI1043 intracellular septation protein A YP_050408.1 2619430 D 218491 CDS YP_050409.1 50121242 2881658 2620019..2620441 1 NC_004547.2 YciA; hydrolase that catalyzes the hydrolysis of the thioester bond in palmitoyl-CoA and malonyl-CoA; member of the the acyl coenzyme A hydrolase family of proteins; acyl-CoA thioester hydrolase 2620441 2881658 ECA2314 Pectobacterium atrosepticum SCRI1043 acyl-CoA thioester hydrolase YP_050409.1 2620019 D 218491 CDS YP_050410.1 50121243 2884265 complement(2620555..2621313) 1 NC_004547.2 membrane spanning protein in TonB-ExbB-ExbD complex; transduces proton motive force of the cytoplasmic membrane to outer membrane transporters; involved in the transport of ron-siderophore complexes, vitamin B12 and colicins; transport protein TonB 2621313 tonB 2884265 tonB Pectobacterium atrosepticum SCRI1043 transport protein TonB YP_050410.1 2620555 R 218491 CDS YP_050411.1 50121244 2881668 2621565..2621861 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri protein ycii or b1251 or c1716 or sf1254 SWALL:YCII_ECOLI (SWALL:P31070) (98 aa) fasta scores: E(): 7.2e-27, 75.51% id in 98 aa, and to Salmonella typhimurium, and Salmonella typhi cytoplasmic protein ycii or stm1738 or sty1313 SWALL:Q8XH04 (EMBL:AE008777) (98 aa) fasta scores: E(): 4.4e-26, 72.44% id in 98 aa; hypothetical protein 2621861 2881668 ECA2316 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050411.1 2621565 D 218491 CDS YP_050412.1 50121245 2881669 2621870..2623666 1 NC_004547.2 Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 2.1e-47, 31.81% id in 528 aa, and to Yersinia pestis methyl-accepting chemotaxis protein y3190 SWALL:AAM86740 (EMBL:AE013920) (566 aa) fasta scores: E(): 8e-81, 47.86% id in 516 aa; methyl-accepting chemotaxis protein 2623666 2881669 ECA2317 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_050412.1 2621870 D 218491 CDS YP_050413.1 50121246 2884955 2624113..2625573 1 NC_004547.2 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); cardiolipin synthetase 2625573 cls 2884955 cls Pectobacterium atrosepticum SCRI1043 cardiolipin synthetase YP_050413.1 2624113 D 218491 CDS YP_050414.1 50121247 2881670 2625646..2625969 1 NC_004547.2 highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; dsDNA-mimic protein 2625969 2881670 ECA2319 Pectobacterium atrosepticum SCRI1043 dsDNA-mimic protein YP_050414.1 2625646 D 218491 CDS YP_050415.1 50121248 2885559 complement(2626058..2627092) 1 NC_004547.2 Similar to Salmonella typhimurium oligopeptide transport ATP-binding protein OppF or stm1742 SWALL:OPPF_SALTY (SWALL:P08007) (334 aa) fasta scores: E(): 1.9e-108, 85.88% id in 333 aa; oligopeptide transport ATP-binding protein 2627092 oppF 2885559 oppF Pectobacterium atrosepticum SCRI1043 oligopeptide transport ATP-binding protein YP_050415.1 2626058 R 218491 CDS YP_050416.1 50121249 2882979 complement(2627089..2628084) 1 NC_004547.2 Similar to Salmonella typhimurium oligopeptide transport ATP-binding protein OppD or stm1743 SWALL:OPPD_SALTY (SWALL:P04285) (335 aa) fasta scores: E(): 3.4e-102, 86.29% id in 321 aa; oligopeptide transporter ATP-binding protein 2628084 oppD 2882979 oppD Pectobacterium atrosepticum SCRI1043 oligopeptide transporter ATP-binding protein YP_050416.1 2627089 R 218491 CDS YP_050417.1 50121250 2882978 complement(2628096..2629004) 1 NC_004547.2 Similar to Salmonella typhimurium oligopeptide transport system permease protein OppC or stm1744 SWALL:OPPC_SALTY (SWALL:P08006) (302 aa) fasta scores: E(): 8.6e-101, 86.09% id in 302 aa; oligopeptide transport system permease 2629004 oppC 2882978 oppC Pectobacterium atrosepticum SCRI1043 oligopeptide transport system permease YP_050417.1 2628096 R 218491 CDS YP_050418.1 50121251 2882977 complement(2629016..2629936) 1 NC_004547.2 Similar to Salmonella typhimurium oligopeptide transport system permease protein OppB or stm1745 SWALL:OPPB_SALTY (SWALL:P08005) (306 aa) fasta scores: E(): 2e-103, 90.52% id in 306 aa; oligopeptide transporter permease 2629936 oppB 2882977 oppB Pectobacterium atrosepticum SCRI1043 oligopeptide transporter permease YP_050418.1 2629016 R 218491 CDS YP_050419.1 50121252 2883252 complement(2629990..2631627) 1 NC_004547.2 Similar to Salmonella typhimurium periplasmic oligopeptide-binding protein precursor OppA or stm1746 SWALL:OPPA_SALTY (SWALL:P06202) (543 aa) fasta scores: E(): 3.2e-174, 76.33% id in 545 aa. Also highly similar to ECA2325 80.784% id; periplasmic oligopeptide-binding protein 2631627 oppA1 2883252 oppA1 Pectobacterium atrosepticum SCRI1043 periplasmic oligopeptide-binding protein YP_050419.1 2629990 R 218491 CDS YP_050420.1 50121253 2883253 complement(2631819..2633417) 1 NC_004547.2 Similar to Salmonella typhimurium periplasmic oligopeptide-binding protein precursor OppA or stm1746 SWALL:OPPA_SALTY (SWALL:P06202) (543 aa) fasta scores: E(): 4.8e-173, 76.44% id in 535 aa. Also highly similar to ECA2324 80.784% id; periplasmic oligopeptide-binding protein 2633417 oppA2 2883253 oppA2 Pectobacterium atrosepticum SCRI1043 periplasmic oligopeptide-binding protein YP_050420.1 2631819 R 218491 CDS YP_050421.1 50121254 2883903 2634501..2637176 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 aldehyde-alcohol dehydrogenase [includes: alcohol dehydrogenase, acetaldehyde dehydrogenase, and pyruvate-formate-lyase deactivase AdhE or Ana or b1241 or z2016 or ecs1741 SWALL:ADHE_ECOLI (SWALL:P17547) (890 aa) fasta scores: E(): 0, 89.1% id in 890 aa; bifunctional acetaldehyde-CoA/alcohol dehydrogenase 2637176 adhE 2883903 adhE Pectobacterium atrosepticum SCRI1043 bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_050421.1 2634501 D 218491 CDS YP_050422.1 50121255 2884308 complement(2637311..2637907) 1 NC_004547.2 catalyzes the formation of thymidine 5'-phosphate from thymidine; thymidine kinase 2637907 tdk 2884308 tdk Pectobacterium atrosepticum SCRI1043 thymidine kinase YP_050422.1 2637311 R 218491 CDS YP_050423.1 50121256 2881906 2638299..2638706 1 NC_004547.2 Similar to Erwinia chrysanthemi Hns regulatory protein Hns SWALL:O53007 (EMBL:X89444) (135 aa) fasta scores: E(): 1.2e-39, 91.11% id in 135 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 DNA-binding protein H-NS SWALL:HNS_ECOLI (SWALL:P08936) (136 aa) fasta scores: E(): 8.1e-36, 84.32% id in 134 aa. Also similar to ECA2893 (62.406% id in 133 aa overlap) and to ECA1665 (61.654% id in 133 aa overlap); global DNA-binding transcriptional dual regulator H-NS 2638706 hns2 2881906 hns2 Pectobacterium atrosepticum SCRI1043 global DNA-binding transcriptional dual regulator H-NS YP_050423.1 2638299 D 218491 CDS YP_050424.1 50121257 2883047 complement(2638855..2639766) 1 NC_004547.2 together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose; UTP--glucose-1-phosphate uridylyltransferase subunit GalU 2639766 galU 2883047 galU Pectobacterium atrosepticum SCRI1043 UTP--glucose-1-phosphate uridylyltransferase subunit GalU YP_050424.1 2638855 R 218491 CDS YP_050425.1 50121258 2884090 complement(2639973..2640989) 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum ExpM protein ExpM SWALL:O86197 (EMBL:AJ224437) (338 aa) fasta scores: E(): 1.4e-123, 95.26% id in 338 aa, and to Erwinia chrysanthemi RssB protein RssB SWALL:Q93KA6 (EMBL:AJ410309) (338 aa) fasta scores: E(): 1.1e-97, 75.73% id in 338 aa; response regulator of RpoS 2640989 expM 2884090 expM Pectobacterium atrosepticum SCRI1043 response regulator of RpoS YP_050425.1 2639973 R 218491 CDS YP_050426.1 50121259 2884089 complement(2641143..2642048) 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum ExpL protein ExpL SWALL:O86196 (EMBL:AJ224437) (303 aa) fasta scores: E(): 1.2e-110, 93.37% id in 302 aa, and to Erwinia chrysanthemi RssA protein RssA SWALL:Q93KA7 (EMBL:AJ410309) (304 aa) fasta scores: E(): 3.1e-84, 72.91% id in 299 aa; hypothetical protein 2642048 expL 2884089 expL Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050426.1 2641143 R 218491 CDS YP_050427.1 50121260 2881671 2642181..2642648 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2172/y2149 ypo2172 or y2149 SWALL:AAM85711 (EMBL:AJ414151) (154 aa) fasta scores: E(): 2.7e-36, 56.77% id in 155 aa, and to Shigella flexneri hypothetical protein ychj ychj or sf1233 SWALL:YCHJ_SHIFL (SWALL:P38481) (152 aa) fasta scores: E(): 6.2e-29, 47.74% id in 155 aa; hypothetical protein 2642648 2881671 ECA2332 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050427.1 2642181 D 218491 CDS YP_050428.1 50121261 2884641 2642732..2643580 1 NC_004547.2 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 2643580 purU 2884641 purU Pectobacterium atrosepticum SCRI1043 formyltetrahydrofolate deformylase YP_050428.1 2642732 D 218491 CDS YP_050429.1 50121262 2881319 complement(2644386..2645012) 1 NC_004547.2 Similar to Pasteurella multocida hypothetical protein Pm0935 SWALL:Q9CM99 (EMBL:AE006133) (226 aa) fasta scores: E(): 6.7e-43, 53.2% id in 203 aa, and to Pseudomonas putida conserved hypothetical protein pp4901 SWALL:AAN70468 (EMBL:AE016792) (203 aa) fasta scores: E(): 2.2e-41, 55.77% id in 199 aa; hypothetical protein 2645012 2881319 ECA2334 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050429.1 2644386 R 218491 CDS YP_050430.1 50121263 2882646 2645457..2646263 1 NC_004547.2 removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; exonuclease III 2646263 xthA 2882646 xthA Pectobacterium atrosepticum SCRI1043 exonuclease III YP_050430.1 2645457 D 218491 CDS YP_050431.1 50121264 2881320 complement(2646365..2646655) 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo2166 or y2155 SWALL:Q8ZEJ9 (EMBL:AJ414151) (96 aa) fasta scores: E(): 5.7e-17, 48.91% id in 92 aa, and to Salmonella typhi exported protein sty1814 SWALL:Q8Z6F7 (EMBL:AL627271) (91 aa) fasta scores: E(): 2e-14, 50% id in 86 aa; hypothetical protein 2646655 2881320 ECA2336 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050431.1 2646365 R 218491 CDS YP_050432.1 50121265 2884257 complement(2646652..2648577) 1 NC_004547.2 decatenates replicating daughter chromosomes; DNA topoisomerase III 2648577 topB 2884257 topB Pectobacterium atrosepticum SCRI1043 DNA topoisomerase III YP_050432.1 2646652 R 218491 CDS YP_050433.1 50121266 2881321 complement(2648673..2649224) 1 NC_004547.2 Similar to Yersinia pestis nitroreductase ypo2163 or y2159 SWALL:Q8ZEK2 (EMBL:AJ414151) (183 aa) fasta scores: E(): 1.3e-57, 73.22% id in 183 aa, and to Salmonella typhimurium, and Salmonella typhi oxidoreductase ydja or stm1296 or sty1818 SWALL:Q8XGY1 (EMBL:AE008756) (183 aa) fasta scores: E(): 4.3e-52, 69.39% id in 183 aa; hypothetical protein 2649224 2881321 ECA2338 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050433.1 2648673 R 218491 CDS YP_050434.1 50121267 2884363 2649493..2651343 1 NC_004547.2 SppA; catalyzes the degradation of cleaved signal peptides; essential to maintain secretion of mature proteins across the membrane; protease 4 2651343 sppA 2884363 sppA Pectobacterium atrosepticum SCRI1043 protease 4 YP_050434.1 2649493 D 218491 CDS YP_050435.1 50121268 2884178 2651794..2652813 1 NC_004547.2 converts asparagine to aspartate and ammonia; asparaginase 2652813 ansA 2884178 ansA Pectobacterium atrosepticum SCRI1043 asparaginase YP_050435.1 2651794 D 218491 CDS YP_050436.1 50121269 2883275 2652833..2653480 1 NC_004547.2 catalyzes the formation of nicotinate from nicotinamide in NAD biosynthesis and the formation of pyrazinoate from pyrazinamide; nicotinamidase/pyrazinamidase 2653480 pncA 2883275 pncA Pectobacterium atrosepticum SCRI1043 nicotinamidase/pyrazinamidase YP_050436.1 2652833 D 218491 CDS YP_050437.1 50121270 2882121 complement(2653564..2653836) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo2159 SWALL:Q8ZEK6 (EMBL:AJ414151) (90 aa) fasta scores: E(): 1.4e-26, 78.88% id in 90 aa, and to Escherichia coli hypothetical protein yeac or b1777 SWALL:YEAC_ECOLI (SWALL:P76231) (90 aa) fasta scores: E(): 1.1e-22, 67.04% id in 88 aa; hypothetical protein 2653836 2882121 ECA2342 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050437.1 2653564 R 218491 CDS YP_050438.1 50121271 2881210 complement(2653967..2654386) 1 NC_004547.2 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; provides protection against oxidative stress; methionine sulfoxide reductase B 2654386 msrB 2881210 msrB Pectobacterium atrosepticum SCRI1043 methionine sulfoxide reductase B YP_050438.1 2653967 R 218491 CDS YP_050439.1 50121272 2882923 2654735..2655739 1 NC_004547.2 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase 2655739 gapA 2882923 gapA Pectobacterium atrosepticum SCRI1043 glyceraldehyde-3-phosphate dehydrogenase YP_050439.1 2654735 D 218491 CDS YP_050440.1 50121273 2882122 2655847..2656716 1 NC_004547.2 Similar to Salmonella typhimurium enzymes related to aldose 1-epimerase yead or stm1289 SWALL:Q8ZPV9 (EMBL:AE008756) (294 aa) fasta scores: E(): 2.7e-73, 58.7% id in 293 aa, and to Yersinia pestis hypothetical protein ypo2156 or y2166 SWALL:Q8ZEK9 (EMBL:AJ414151) (291 aa) fasta scores: E(): 7.4e-83, 64.01% id in 289 aa; aldose 1-epimerase 2656716 2882122 ECA2345 Pectobacterium atrosepticum SCRI1043 aldose 1-epimerase YP_050440.1 2655847 D 218491 CDS YP_050441.1 50121274 2882123 complement(2656798..2657649) 1 NC_004547.2 Similar to Salmonella typhi oxidoreductase sty1828 SWALL:Q8Z6F0 (EMBL:AL627271) (285 aa) fasta scores: E(): 1.1e-72, 63.7% id in 281 aa, and to Escherichia coli hypothetical protein yeae yeae or b1781 SWALL:YEAE_ECOLI (SWALL:P76234) (284 aa) fasta scores: E(): 4.1e-72, 63.7% id in 281 aa; aldo/keto reductase 2657649 2882123 ECA2346 Pectobacterium atrosepticum SCRI1043 aldo/keto reductase YP_050441.1 2656798 R 218491 CDS YP_050442.1 50121275 2885613 complement(2657786..2658535) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri MltA-interacting protein precursor MipA or b1782 or sf1441 SWALL:MIPA_ECOLI (SWALL:P77486) (248 aa) fasta scores: E(): 7.7e-51, 52.61% id in 249 aa; MltA-interacting protein 2658535 mipA 2885613 mipA Pectobacterium atrosepticum SCRI1043 MltA-interacting protein YP_050442.1 2657786 R 218491 CDS YP_050443.1 50121276 2882133 2658991..2660925 1 NC_004547.2 Similar to Salmonella typhimurium ser protein kinase yeag or stm1285 SWALL:Q8ZPW2 (EMBL:AE008755) (644 aa) fasta scores: E(): 0, 94.09% id in 644 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein yeag or b1783 or c2188 or z2823 or ecs2492 SWALL:YEAG_ECOLI (SWALL:P77391) (644 aa) fasta scores: E(): 0, 94.09% id in 644 aa; hypothetical protein 2660925 2882133 ECA2348 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050443.1 2658991 D 218491 CDS YP_050444.1 50121277 2882134 2660962..2662236 1 NC_004547.2 Similar to Salmonella enterica subsp. enterica serovar Typhi Ty2 hypothetical protein t1163 SWALL:AAO68822 (EMBL:AE016838) (428 aa) fasta scores: E(): 2.7e-140, 86.85% id in 426 aa, and to Escherichia coli hypothetical protein yeah or b1784 SWALL:YEAH_ECOLI (SWALL:P76235) (427 aa) fasta scores: E(): 3.6e-139, 87.41% id in 421 aa; hypothetical protein 2662236 2882134 ECA2349 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050444.1 2660962 D 218491 CDS YP_050445.1 50121278 2882135 2662378..2663577 1 NC_004547.2 Similar to Yersinia pestis multidrug resistance protein ypo2148 or y2173 SWALL:Q8ZEL6 (EMBL:AJ414151) (400 aa) fasta scores: E(): 3.6e-100, 68.58% id in 382 aa, and to Shewanella oneidensis drug resistance transporter, bcr/cfla family protein so4555 SWALL:AAN57516 (EMBL:AE015887) (402 aa) fasta scores: E(): 1.4e-52, 42.3% id in 390 aa; transport protein 2663577 2882135 ECA2350 Pectobacterium atrosepticum SCRI1043 transport protein YP_050445.1 2662378 D 218491 CDS YP_050446.1 50121279 2882627 complement(2663609..2664862) 1 NC_004547.2 catalyzes the oxidative deamination of D-amino acids; D-amino acid dehydrogenase small subunit 2664862 dadA 2882627 dadA Pectobacterium atrosepticum SCRI1043 D-amino acid dehydrogenase small subunit YP_050446.1 2663609 R 218491 CDS YP_050447.1 50121280 2882172 2665344..2666324 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri 6-phosphofructokinase isozyme I PfkA or b3916 or z5460 or ecs4841 or sf3994 SWALL:K6P1_ECOLI (SWALL:P06998) (320 aa) fasta scores: E(): 1.9e-17, 30.79% id in 315 aa. Also similar to ECA4307 (isozyme I, PfkA) (30.323% id.in 310 aa overlap); 6-phosphofructokinase isozyme II 2666324 2882172 ECA2352 Pectobacterium atrosepticum SCRI1043 6-phosphofructokinase isozyme II YP_050447.1 2665344 D 218491 CDS YP_050448.1 50121281 2882173 2666335..2666628 1 NC_004547.2 Similar to Listeria monocytogenes hypothetical protein Lmo2650 SWALL:Q8Y425 (EMBL:AL591984) (90 aa) fasta scores: E(): 5e-08, 35.1% id in 94 aa, and to Salmonella typhimurium, and Salmonella typhi cytoplasmic protein stm2343 or sty2573 SWALL:Q8XG32 (EMBL:AE008805) (90 aa) fasta scores: E(): 7.8e-08, 42.85% id in 91 aa; hypothetical protein 2666628 2882173 ECA2353 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050448.1 2666335 D 218491 CDS YP_050449.1 50121282 2882174 2666642..2667979 1 NC_004547.2 membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC 2667979 ulaA 2882174 ulaA Pectobacterium atrosepticum SCRI1043 PTS system ascorbate-specific transporter subunit IIC YP_050449.1 2666642 D 218491 CDS YP_050450.1 50121283 2882187 2668044..2668322 1 NC_004547.2 hypothetical protein 2668322 2882187 ECA2355 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050450.1 2668044 D 218491 CDS YP_050451.1 50121284 2882188 2668329..2668766 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 unknown pentitol phosphotransferase enzyme ii, a component sgaa or b4195 or z5804 or ecs5171 SWALL:PTXA_ECOLI (SWALL:P39303) (154 aa) fasta scores: E(): 2.3e-15, 34.01% id in 147 aa, and to Salmonella typhimurium PTS enzyme iisga subunit ptxa or stm4385 SWALL:Q8ZK88 (EMBL:AE008905) (154 aa) fasta scores: E(): 9e-16, 34.69% id in 147 aa; PTS system transporter subunit IIA 2668766 2882188 ECA2356 Pectobacterium atrosepticum SCRI1043 PTS system transporter subunit IIA YP_050451.1 2668329 D 218491 CDS YP_050452.1 50121285 2882189 2668763..2669296 1 NC_004547.2 Similar to Brucella suis shikimate kinase Arok or br2029 SWALL:Q8FY59 (EMBL:AE014491) (200 aa) fasta scores: E(): 2.3, 20.78% id in 178 aa, and to the C-terminal region of Rhizobium loti glucokinase mlr3412 SWALL:Q98GB0 (EMBL:AP003001) (482 aa) fasta scores: E(): 1.5e-27, 45.71% id in 175 aa; kinase 2669296 2882189 ECA2357 Pectobacterium atrosepticum SCRI1043 kinase YP_050452.1 2668763 D 218491 CDS YP_050453.1 50121286 2882190 2669333..2670232 1 NC_004547.2 Similar to Rhizobium loti tagatose-1,6-bisphosphate aldolase mlr3411 SWALL:Q98GB1 (EMBL:AP003001) (302 aa) fasta scores: E(): 2.3e-75, 62.75% id in 298 aa, and to Streptococcus mutans tagatose 1,6-diphosphate aldolase LacD or smu.1493 SWALL:LACD_STRMU (SWALL:P26425) (325 aa) fasta scores: E(): 4.2e-06, 23.19% id in 319 aa; aldolase 2670232 2882190 ECA2358 Pectobacterium atrosepticum SCRI1043 aldolase YP_050453.1 2669333 D 218491 CDS YP_050454.1 50121287 2885072 2670474..2672015 1 NC_004547.2 Similar to Salmonella typhimurium cytoplasmic protein ycgb or stm1804 SWALL:Q8ZP16 (EMBL:AE008780) (510 aa) fasta scores: E(): 1.3e-185, 85.6% id in 507 aa, and to Escherichia coli hypothetical protein ycgb or b1188 SWALL:YCGB_ECOLI (SWALL:P29013) (510 aa) fasta scores: E(): 4.9e-185, 84.98% id in 506 aa; SpoVR family protein 2672015 2885072 ECA2359 Pectobacterium atrosepticum SCRI1043 SpoVR family protein YP_050454.1 2670474 D 218491 CDS YP_050455.1 50121288 2883502 complement(2672121..2672840) 1 NC_004547.2 Multifunctional regulator of fatty acid metabolism; fatty acid metabolism regulator 2672840 fadR 2883502 fadR Pectobacterium atrosepticum SCRI1043 fatty acid metabolism regulator YP_050455.1 2672121 R 218491 CDS YP_050456.1 50121289 2882752 2673071..2674651 1 NC_004547.2 involved in regulation of intracellular pH under alkaline conditions; sodium/proton antiporter 2674651 nhaB 2882752 nhaB Pectobacterium atrosepticum SCRI1043 sodium/proton antiporter YP_050456.1 2673071 D 218491 CDS YP_050457.1 50121290 2882415 2674846..2675376 1 NC_004547.2 disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; disulfide bond formation protein B 2675376 dsbB 2882415 dsbB Pectobacterium atrosepticum SCRI1043 disulfide bond formation protein B YP_050457.1 2674846 D 218491 CDS YP_050458.1 50121291 2885073 complement(2675458..2675655) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri DNA polymerase III, theta subunit HolE or b1842 or c2252 or z2891 or ecs2552 or sf1852.1 SWALL:HOLE_ECOLI (SWALL:P28689) (76 aa) fasta scores: E(): 3.5, 32.65% id in 49 aa, and to Yersinia pestis hypothetical protein ypo2590 ypo2590 or y1160 SWALL:Q8ZDH8 (EMBL:AJ414153) (64 aa) fasta scores: E(): 5e-09, 50.79% id in 63 aa; DNA polymerase III subunit theta 2675655 2885073 ECA2363 Pectobacterium atrosepticum SCRI1043 DNA polymerase III subunit theta YP_050458.1 2675458 R 218491 CDS YP_050459.1 50121292 2885074 2676020..2676427 1 NC_004547.2 lipoprotein 2676427 2885074 ECA2364 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_050459.1 2676020 D 218491 CDS YP_050460.1 50121293 2885814 complement(2676514..2676960) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri hypothetical protein ycgn or b1181 or sf1170 SWALL:AAN42786 (EMBL:AE000216) (153 aa) fasta scores: E(): 6.8e-54, 79.73% id in 148 aa, and to Yersinia pestis hypothetical protein ypo2083 or y2228 SWALL:AAM85788 (EMBL:AJ414151) (148 aa) fasta scores: E(): 7.8e-54, 80.4% id in 148 aa; hypothetical protein 2676960 2885814 ECA2365 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050460.1 2676514 R 218491 CDS YP_050461.1 50121294 2885815 complement(2677067..2677723) 1 NC_004547.2 Similar to Yersinia pestis fumarylacetoacetate hydrolase family protein ypo2082 SWALL:Q8ZES1 (EMBL:AJ414151) (218 aa) fasta scores: E(): 5.9e-73, 82.56% id in 218 aa, and to Salmonella typhimurium, and Salmonella typhi fumarylacetoacetate ycgm or stm1812 or sty1942 SWALL:Q8XF52 (EMBL:AE008780) (219 aa) fasta scores: E(): 3.8e-66, 75.34% id in 219 aa; hypothetical protein 2677723 2885815 ECA2366 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050461.1 2677067 R 218491 CDS YP_050462.1 50121295 2885816 complement(2678066..2678353) 1 NC_004547.2 Similar to Shigella flexneri orf, conserved hypothetical protein ycgl or sf1168 SWALL:AAN42784 (EMBL:AE015143) (108 aa) fasta scores: E(): 1.3e-25, 83.52% id in 85 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 protein ycgl or b1179 or c1627 or z1941 or ecs1674 SWALL:YCGL_ECOLI (SWALL:P76003) (108 aa) fasta scores: E(): 4e-25, 82.35% id in 85 aa; hypothetical protein 2678353 2885816 ECA2367 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050462.1 2678066 R 218491 CDS YP_050463.1 50121296 2883085 2678460..2679146 1 NC_004547.2 blocks the formation of polar Z-ring septums; septum formation inhibitor 2679146 minC 2883085 minC Pectobacterium atrosepticum SCRI1043 septum formation inhibitor YP_050463.1 2678460 D 218491 CDS YP_050464.1 50121297 2883086 2679167..2679979 1 NC_004547.2 ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; cell division inhibitor MinD 2679979 minD 2883086 minD Pectobacterium atrosepticum SCRI1043 cell division inhibitor MinD YP_050464.1 2679167 D 218491 CDS YP_050465.1 50121298 2883087 2679983..2680252 1 NC_004547.2 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 2680252 minE 2883087 minE Pectobacterium atrosepticum SCRI1043 cell division topological specificity factor MinE YP_050465.1 2679983 D 218491 CDS YP_050466.1 50121299 2885042 complement(2680470..2681594) 1 NC_004547.2 Similar to Escherichia coli ribonuclease D Rnd or b1804 SWALL:RND_ECOLI (SWALL:P09155) (375 aa) fasta scores: E(): 2.7e-102, 65.24% id in 374 aa; ribonuclease D 2681594 rnd 2885042 rnd Pectobacterium atrosepticum SCRI1043 ribonuclease D YP_050466.1 2680470 R 218491 CDS YP_050467.1 50121300 2883750 complement(2681736..2683421) 1 NC_004547.2 Activates fatty acids by binding to coenzyme A; long-chain-fatty-acid--CoA ligase 2683421 fadD 2883750 fadD Pectobacterium atrosepticum SCRI1043 long-chain-fatty-acid--CoA ligase YP_050467.1 2681736 R 218491 CDS YP_050468.1 50121301 2885817 complement(2683819..2684415) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 hypothetical lipoprotein yeay precursor yeay or b1806 or c2210 SWALL:YEAY_ECOLI (SWALL:P76255) (193 aa) fasta scores: E(): 3.6e-38, 57.36% id in 197 aa, and to Salmonella enterica subsp. enterica serovar Typhi Ty2 lipoprotein t1058 SWALL:AAO68724 (EMBL:AE016837) (193 aa) fasta scores: E(): 8.2e-38, 57.36% id in 197 aa; outer membrane lipoprotein 2684415 2885817 ECA2373 Pectobacterium atrosepticum SCRI1043 outer membrane lipoprotein YP_050468.1 2683819 R 218491 CDS YP_050469.1 50121302 2885786 complement(2684682..2685383) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo2072 SWALL:Q8ZET1 (EMBL:AJ414151) (232 aa) fasta scores: E(): 1.3e-62, 72.84% id in 232 aa, and to Escherichia coli hypothetical protease yeaz yeaz or b1807 SWALL:YEAZ_ECOLI (SWALL:P76256) (231 aa) fasta scores: E(): 2.8e-59, 69.13% id in 230 aa; hypothetical protein 2685383 2885786 ECA2374 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050469.1 2684682 R 218491 CDS YP_050470.1 50121303 2885787 complement(2685498..2687417) 1 NC_004547.2 Similar to Yersinia pestis dead box family helicase ypo2071 or y2239 SWALL:Q8ZET2 (EMBL:AJ414151) (634 aa) fasta scores: E(): 2.8e-217, 84.12% id in 630 aa, and to Escherichia coli O6 probable ATP-dependent helicase yoaa c2212 SWALL:AAN80671 (EMBL:AE016761) (636 aa) fasta scores: E(): 1.2e-208, 80.57% id in 628 aa; ATP-dependent helicase 2687417 2885787 ECA2375 Pectobacterium atrosepticum SCRI1043 ATP-dependent helicase YP_050470.1 2685498 R 218491 CDS YP_050471.1 50121304 2884913 2687612..2687956 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri hypothetical protein yoab or b1809 or c2213 or sf1419 SWALL:YOAB_ECOLI (SWALL:P76258) (114 aa) fasta scores: E(): 6.4e-31, 73.68% id in 114 aa, and to Yersinia pestis hypothetical protein ypo2070 or y2240 SWALL:Q8ZET3 (EMBL:AJ414151) (114 aa) fasta scores: E(): 1.4e-30, 71.93% id in 114 aa; endoribonuclease 2687956 2884913 ECA2376 Pectobacterium atrosepticum SCRI1043 endoribonuclease YP_050471.1 2687612 D 218491 CDS YP_050472.1 50121305 2884914 complement(2688125..2688361) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1774 or y2534 SWALL:YH74_YERPE (SWALL:Q8ZFE0) (85 aa) fasta scores: E(): 1.1e-10, 53.84% id in 78 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein yoah or b1811 or c2216 or z2854 or ecs2520 SWALL:YOAH_ECOLI (SWALL:P76260) (59 aa) fasta scores: E(): 1.7e-10, 67.24% id in 58 aa; hypothetical protein 2688361 2884914 ECA2377 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050472.1 2688125 R 218491 CDS YP_050473.1 50121306 2885412 2688488..2689942 1 NC_004547.2 catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine; para-aminobenzoate synthase component I 2689942 pabB 2885412 pabB Pectobacterium atrosepticum SCRI1043 para-aminobenzoate synthase component I YP_050473.1 2688488 D 218491 CDS YP_050474.1 50121307 2884915 2689954..2690532 1 NC_004547.2 Similar to Escherichia coli hypothetical upf0035 protein yeab or b1813 SWALL:YEAB_ECOLI (SWALL:P43337) (192 aa) fasta scores: E(): 3.4e-41, 60.41% id in 192 aa, and to Salmonella typhimurium, and Salmonella typhi hypothetical upf0035 protein yeab or stm1825 or sty1955 SWALL:YEAB_SALTY (SWALL:P43339) (192 aa) fasta scores: E(): 8e-41, 58.33% id in 192 aa; hypothetical protein 2690532 2884915 ECA2379 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050474.1 2689954 D 218491 CDS YP_050475.1 50121308 2884422 2691006..2692370 1 NC_004547.2 Similar to Escherichia coli L-serine dehydratase 1 SdaA or b1814 SWALL:SDHL_ECOLI (SWALL:P16095) (454 aa) fasta scores: E(): 5.1e-154, 83.92% id in 454 aa. Also similar to ECA3159 (SdaB) (75.165% id. in 455 aa overlap); L-serine dehydratase 1 2692370 sdaA 2884422 sdaA Pectobacterium atrosepticum SCRI1043 L-serine dehydratase 1 YP_050475.1 2691006 D 218491 CDS YP_050476.1 50121309 2884916 complement(2692521..2693453) 1 NC_004547.2 Similar to Vibrio vulnificus transcriptional regulator vv21654 SWALL:AAO08512 (EMBL:AE016813) (307 aa) fasta scores: E(): 3.6e-40, 39.79% id in 299 aa, and to Xanthomonas campestris transcriptional regulator xcc3667 SWALL:Q8P4P0 (EMBL:AE012487) (311 aa) fasta scores: E(): 7.8e-40, 41.27% id in 298 aa; LysR family transcriptional regulator 2693453 2884916 ECA2381 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_050476.1 2692521 R 218491 CDS YP_050477.1 50121310 2884895 2693565..2694197 1 NC_004547.2 Similar to Ralstonia solanacearum transmemembrane reductase oxidoreductase protein rsp1147 or rs05455 SWALL:Q8XQS2 (EMBL:AL646083) (208 aa) fasta scores: E(): 4.5e-24, 43.81% id in 210 aa, and to Streptomyces coelicolor reductase sco0967 or scm11.22C SWALL:Q9RIU0 (EMBL:AL939107) (207 aa) fasta scores: E(): 5.2e-16, 39.89% id in 188 aa; NADP oxidoreductase coenzyme F420-dependent protein 2694197 2884895 ECA2382 Pectobacterium atrosepticum SCRI1043 NADP oxidoreductase coenzyme F420-dependent protein YP_050477.1 2693565 D 218491 CDS YP_050478.1 50121311 2884896 2694345..2695058 1 NC_004547.2 Similar to Pseudomonas aeruginosa probable hydrolase pa1202 SWALL:Q9I4D6 (EMBL:AE004550) (205 aa) fasta scores: E(): 3.9e-25, 41.17% id in 204 aa, and to Pseudomonas syringae isochorismatase family protein pspto1009 SWALL:AAO54542 (EMBL:AE016859) (208 aa) fasta scores: E(): 5.3e-24, 38.91% id in 203 aa; isochorismatase 2695058 2884896 ECA2383 Pectobacterium atrosepticum SCRI1043 isochorismatase YP_050478.1 2694345 D 218491 CDS YP_050479.1 50121312 2884897 complement(2695181..2696737) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein yoae or b1816 or c2222 or z2859 or ecs2525 SWALL:YOAE_ECOLI (SWALL:P76262) (518 aa) fasta scores: E(): 1.6e-140, 72.64% id in 519 aa, and to Salmonella enterica subsp. enterica serovar Typhi Ty2 membrane protein t1049 SWALL:AAO68715 (EMBL:AE016837) (519 aa) fasta scores: E(): 2.8e-137, 70.9% id in 519 aa; hypothetical protein 2696737 2884897 ECA2384 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050479.1 2695181 R 218491 CDS YP_050480.1 50121313 2881337 2697304..2698272 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri PTS system, mannose-specific iiab component ManX or PtsL or GptB or b1817 or c2223 or z2860 or ecs2527 or sf1411 SWALL:PTNA_ECOLI (SWALL:P08186) (322 aa) fasta scores: E(): 5.5e-80, 74.84% id in 322 aa; PTS system mannose-specific transporter subunit IIAB 2698272 manX 2881337 manX Pectobacterium atrosepticum SCRI1043 PTS system mannose-specific transporter subunit IIAB YP_050480.1 2697304 D 218491 CDS YP_050481.1 50121314 2881397 2698450..2699247 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri PTS system, mannose-specific IIc component ManY or PtsP or Pel or b1818 or c2224 or z2861 or ecs2528 or sf1410 SWALL:PTNC_ECOLI (SWALL:P08187) (266 aa) fasta scores: E(): 1e-78, 87.21% id in 266 aa; PTS system mannose-specific transporter subunit IIC 2699247 manY 2881397 manY Pectobacterium atrosepticum SCRI1043 PTS system mannose-specific transporter subunit IIC YP_050481.1 2698450 D 218491 CDS YP_050482.1 50121315 2881398 2699262..2700104 1 NC_004547.2 hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; PTS system mannose-specific transporter subunit IID 2700104 manZ 2881398 manZ Pectobacterium atrosepticum SCRI1043 PTS system mannose-specific transporter subunit IID YP_050482.1 2699262 D 218491 CDS YP_050483.1 50121316 2884762 2700179..2700637 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo1755 or y2554 SWALL:AAM86109 (EMBL:AJ414150) (153 aa) fasta scores: E(): 3e-41, 73.02% id in 152 aa, and to Escherichia coli, and Escherichia coli O6 hypothetical protein yobd or b1820 or c2227 SWALL:YOBD_ECOLI (SWALL:P76263) (152 aa) fasta scores: E(): 8.8e-33, 57.89% id in 152 aa; hypothetical protein 2700637 2884762 ECA2388 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050483.1 2700179 D 218491 CDS YP_050484.1 50121317 2884763 2701066..2701629 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo1754 or y2555 SWALL:Q8ZFF8 (EMBL:AJ414150) (189 aa) fasta scores: E(): 1.2e-53, 76.88% id in 186 aa, and to Escherichia coli hypothetical protein yebn or b1821 SWALL:YEBN_ECOLI (SWALL:P76264) (206 aa) fasta scores: E(): 2.3e-49, 67.2% id in 186 aa; hypothetical protein 2701629 2884763 ECA2389 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050484.1 2701066 D 218491 CDS YP_050485.1 50121318 2884460 complement(2701800..2702630) 1 NC_004547.2 methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth; 23S rRNA methyltransferase 2702630 rrmA 2884460 rrmA Pectobacterium atrosepticum SCRI1043 23S rRNA methyltransferase YP_050485.1 2701800 R 218491 CDS YP_050486.1 50121319 2884764 complement(2702738..2702947) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, Salmonella typhimurium, and Salmonella typhi cold shock-like protein CspC SWALL:CSPC_ECOLI (SWALL:P36996) (68 aa) fasta scores: E(): 3.2e-25, 97.05% id in 68 aa, and to Yersinia pestis cold shock protein ypo1746 SWALL:Q8ZFG3 (EMBL:AJ414150) (69 aa) fasta scores: E(): 5.2e-26, 98.55% id in 69 aa; cold shock-like protein CspC 2702947 2884764 ECA2391 Pectobacterium atrosepticum SCRI1043 cold shock-like protein CspC YP_050486.1 2702738 R 218491 CDS YP_050487.1 50121320 2882640 2704043..2704957 1 NC_004547.2 Similar to Yersinia pestis periplasmic chelated iron-binding protein YfeA precursor yfea or ypo2439 or y1897 SWALL:YFEA_YERPE (SWALL:Q56952) (311 aa) fasta scores: E(): 1.6e-89, 78.85% id in 298 aa; periplasmic chelated iron-binding protein 2704957 yfeA 2882640 yfeA Pectobacterium atrosepticum SCRI1043 periplasmic chelated iron-binding protein YP_050487.1 2704043 D 218491 CDS YP_050488.1 50121321 2882480 2704954..2705844 1 NC_004547.2 Similar to Yersinia pestis chelated iron transport system membrane protein YfeB or ypo2440 or y1896 SWALL:YFEB_YERPE (SWALL:Q56953) (296 aa) fasta scores: E(): 1.6e-83, 80.14% id in 277 aa; chelated iron transport system membrane protein 2705844 yfeB 2882480 yfeB Pectobacterium atrosepticum SCRI1043 chelated iron transport system membrane protein YP_050488.1 2704954 D 218491 CDS YP_050489.1 50121322 2882481 2705844..2706707 1 NC_004547.2 Similar to Yersinia pestis chelated iron transport system membrane protein YfeC or ypo2441 or y1895 SWALL:YFEC_YERPE (SWALL:Q56954) (294 aa) fasta scores: E(): 2.1e-93, 90.03% id in 281 aa; chelated iron transport system membrane protein 2706707 yfeC 2882481 yfeC Pectobacterium atrosepticum SCRI1043 chelated iron transport system membrane protein YP_050489.1 2705844 D 218491 CDS YP_050490.1 50121323 2882482 2706704..2707561 1 NC_004547.2 Similar to Yersinia pestis chelated iron transport system membrane protein YfeD or ypo2442 or y1894 SWALL:YFED_YERPE (SWALL:Q56955) (297 aa) fasta scores: E(): 3.6e-84, 76.67% id in 283 aa; chelated iron transport system membrane protein 2707561 yfeD 2882482 yfeD Pectobacterium atrosepticum SCRI1043 chelated iron transport system membrane protein YP_050490.1 2706704 D 218491 CDS YP_050491.1 50121324 2884765 2707951..2708811 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2444 ypo2444 or y1892 SWALL:Q8ZDV8 (EMBL:AJ414152) (291 aa) fasta scores: E(): 1.1e-92, 72.53% id in 284 aa, and to Escherichia coli hypothetical protein ynia ynia or b1725 SWALL:YNIA_ECOLI (SWALL:P77739) (286 aa) fasta scores: E(): 1.6e-89, 70.42% id in 284 aa; fructosamine kinase 2708811 2884765 ECA2396 Pectobacterium atrosepticum SCRI1043 fructosamine kinase YP_050491.1 2707951 D 218491 CDS YP_050492.1 50121325 2882477 complement(2708881..2709429) 1 NC_004547.2 Similar to Yersinia pestis yfeabcd regulator YfeE or ypo2445 or y1891 SWALL:YFEE_YERPE (SWALL:Q56956) (184 aa) fasta scores: E(): 1.8e-48, 63.73% id in 182 aa, and to Salmonella typhimurium, and Salmonella typhi regulator ynib or stm1323 or sty1788 SWALL:Q8XFB7 (EMBL:AE008757) (178 aa) fasta scores: E(): 6.8e-47, 63.33% id in 180 aa; hypothetical protein 2709429 yfeE 2882477 yfeE Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050492.1 2708881 R 218491 CDS YP_050493.1 50121326 2884087 2709729..2710394 1 NC_004547.2 YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate; 2-deoxyglucose-6-phosphatase 2710394 2884087 ECA2398 Pectobacterium atrosepticum SCRI1043 2-deoxyglucose-6-phosphatase YP_050493.1 2709729 D 218491 CDS YP_050494.1 50121327 2885180 complement(2710485..2710820) 1 NC_004547.2 Similar to Erwinia chrysanthemi pectin degradation protein KdgF SWALL:KDGF_ERWCH (SWALL:Q05527) (110 aa) fasta scores: E(): 3.3e-38, 89.09% id in 110 aa, and to Yersinia pestis pectin degradation protein KdgF or y1888 SWALL:AAM85455 (EMBL:AE013792) (116 aa) fasta scores: E(): 2.9e-33, 77.98% id in 109 aa; pectin degradation protein 2710820 kdgF 2885180 kdgF Pectobacterium atrosepticum SCRI1043 pectin degradation protein YP_050494.1 2710485 R 218491 CDS YP_050495.1 50121328 2885694 2711183..2712019 1 NC_004547.2 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase 2712019 kduI1 2885694 kduI1 Pectobacterium atrosepticum SCRI1043 5-keto-4-deoxyuronate isomerase YP_050495.1 2711183 D 218491 CDS YP_050496.1 50121329 2884739 2712101..2712862 1 NC_004547.2 catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate; 2-deoxy-D-gluconate 3-dehydrogenase 2712862 kduD 2884739 kduD Pectobacterium atrosepticum SCRI1043 2-deoxy-D-gluconate 3-dehydrogenase YP_050496.1 2712101 D 218491 CDS YP_050497.1 50121330 2884509 2713137..2714768 1 NC_004547.2 Similar to Erwinia chrysanthemi pectate disaccharide-lyase PelW or KdgC SWALL:PELW_ERWCH (SWALL:Q05526) (553 aa) fasta scores: E(): 1.8e-175, 73.97% id in 538 aa. Also similar to ECA2135 (PelB) (37.782% id 532 aa overlap); pectate disaccharide-lyase 2714768 pelW 2884509 pelW Pectobacterium atrosepticum SCRI1043 pectate disaccharide-lyase YP_050497.1 2713137 D 218491 CDS YP_050498.1 50121331 2884269 2714816..2715706 1 NC_004547.2 Similar to Erwinia chrysanthemi inner membrane protein TogM SWALL:Q93KC0 (EMBL:AJ305144) (296 aa) fasta scores: E(): 1.2e-115, 97.63% id in 296 aa; binding-protein-dependent transport system, inner membrane component 2715706 togM 2884269 togM Pectobacterium atrosepticum SCRI1043 binding-protein-dependent transport system, inner membrane component YP_050498.1 2714816 D 218491 CDS YP_050499.1 50121332 2884270 2715699..2716604 1 NC_004547.2 Similar to Erwinia chrysanthemi inner membrane protein TogN SWALL:Q93KB9 (EMBL:AJ305144) (300 aa) fasta scores: E(): 1.7e-108, 90.03% id in 301 aa; binding-protein-dependent transport system, inner membrane component 2716604 togN 2884270 togN Pectobacterium atrosepticum SCRI1043 binding-protein-dependent transport system, inner membrane component YP_050499.1 2715699 D 218491 CDS YP_050500.1 50121333 2884274 2716618..2717745 1 NC_004547.2 Similar to Erwinia chrysanthemi ABC ATPase TogA SWALL:Q93KB8 (EMBL:AJ305144) (375 aa) fasta scores: E(): 8e-119, 85.6% id in 375 aa; ABC transporter ATP-binding protein 2717745 togA 2884274 togA Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_050500.1 2716618 D 218491 CDS YP_050501.1 50121334 2884275 2717761..2719050 1 NC_004547.2 Similar to Erwinia chrysanthemi periplasmic binding protein precursor TogB SWALL:Q93KB7 (EMBL:AJ305144) (430 aa) fasta scores: E(): 3.3e-143, 84.84% id in 429 aa, and to Yersinia pestis sugar-binding protein ypo1719 or TogB or y1881 SWALL:Q8ZFI4 (EMBL:AJ414150) (430 aa) fasta scores: E(): 1.4e-137, 80.69% id in 430 aa. Also similar to ECA3551 (56.398% id) and to ECA2210 (50.117% id); periplasmic pectic oligomers binding protein 2719050 togB 2884275 togB Pectobacterium atrosepticum SCRI1043 periplasmic pectic oligomers binding protein YP_050501.1 2717761 D 218491 CDS YP_050502.1 50121335 2885182 2719307..2720023 1 NC_004547.2 Similar to Erwinia chrysanthemi oligogalacturonate-specific porin KdgM precursor kdgM SWALL:KDGM_ERWCH (SWALL:Q934G3) (236 aa) fasta scores: E(): 7.1e-64, 67.22% id in 238 aa. Also similar to ECA2302 (59.259% id).; oligogalacturonate-specific porin 2720023 kdgM 2885182 kdgM Pectobacterium atrosepticum SCRI1043 oligogalacturonate-specific porin YP_050502.1 2719307 D 218491 CDS YP_050503.1 50121336 2881520 2720363..2721325 1 NC_004547.2 Similar to Erwinia chrysanthemi pectin acetylesterase precursor PaeX SWALL:Q83V97 (EMBL:AJ507215) (322 aa) fasta scores: E(): 1.6e-94, 78.06% id in 310 aa, and to Xanthomonas campestris xylanase XynB or xcc0144 SWALL:Q8PE39 (EMBL:AE012110) (329 aa) fasta scores: E(): 3.3e-61, 56.08% id in 296 aa; pectin acetylesterase 2721325 paeX 2881520 paeX Pectobacterium atrosepticum SCRI1043 pectin acetylesterase YP_050503.1 2720363 D 218491 CDS YP_050504.1 50121337 2884088 2721434..2722009 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri hypothetical protein ydjm precursor ydjm or b1728 or sf1502 SWALL:YDJM_ECOLI (SWALL:P76209) (200 aa) fasta scores: E(): 1.1e-50, 62.3% id in 191 aa, and to Yersinia pestis membrane protein ypo1717 or y1879 SWALL:Q8ZFI6 (EMBL:AJ414150) (182 aa) fasta scores: E(): 1.2e-50, 67.58% id in 182 aa; hypothetical protein 2722009 2884088 ECA2409 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050504.1 2721434 D 218491 CDS YP_050505.1 50121338 2884061 2722186..2723580 1 NC_004547.2 Similar to Yersinia pestis transport protein ypo1716 or y1878 SWALL:Q8ZFI7 (EMBL:AJ414150) (465 aa) fasta scores: E(): 5.1e-137, 81.68% id in 464 aa, and to Escherichia coli hypothetical symporter ydjn ydjn or b1729 SWALL:YDJN_ECOLI (SWALL:P77529) (463 aa) fasta scores: E(): 5e-135, 81.42% id in 463 aa; sodium:dicarboxylate symporter 2723580 2884061 ECA2410 Pectobacterium atrosepticum SCRI1043 sodium:dicarboxylate symporter YP_050505.1 2722186 D 218491 CDS YP_050506.1 50121339 2882726 complement(2723691..2724020) 1 NC_004547.2 osmotically-inducible lipoprotein E; activator of ntr-like gene protein; DNA-binding transcriptional activator OsmE 2724020 osmE 2882726 osmE Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional activator OsmE YP_050506.1 2723691 R 218491 CDS YP_050507.1 50121340 2885136 2724246..2725070 1 NC_004547.2 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 2725070 nadE 2885136 nadE Pectobacterium atrosepticum SCRI1043 NAD synthetase YP_050507.1 2724246 D 218491 CDS YP_050508.1 50121341 2884062 2725214..2726101 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein yddg or c1902 SWALL:Q8FHH9 (EMBL:AE016760) (293 aa) fasta scores: E(): 3.5e-58, 49.14% id in 291 aa, and to Salmonella typhimurium permease yddg or stm1571 SWALL:Q8ZPE4 (EMBL:AE008768) (274 aa) fasta scores: E(): 3.1e-53, 48.7% id in 271 aa; hypothetical protein 2726101 2884062 ECA2413 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050508.1 2725214 D 218491 CDS YP_050509.1 50121342 2884063 2726216..2727934 1 NC_004547.2 Similar to Yersinia pestis ABC transporter ATP-binding protein ypo1735 or y2573 SWALL:Q8ZFH4 (EMBL:AJ414150) (572 aa) fasta scores: E(): 3.6e-167, 79.37% id in 572 aa, and to Agrobacterium tumefaciens ABC transporter, nucleotide binding/ATPase protein atu1738 or agr_c_3190 SWALL:Q8UEL9 (EMBL:AE009130) (598 aa) fasta scores: E(): 1.2e-148, 69.59% id in 569 aa; ABC transporter ATP-binding protein 2727934 2884063 ECA2414 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_050509.1 2726216 D 218491 CDS YP_050510.1 50121343 2884064 2728063..2728506 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty2982 SWALL:Q8Z4B1 (EMBL:AL627276) (114 aa) fasta scores: E(): 6.2e-26, 58.92% id in 112 aa, and to Escherichia coli O6 hypothetical protein ygba or c3293 SWALL:AAN81742 (EMBL:AE016765) (114 aa) fasta scores: E(): 2.5e-25, 58.03% id in 112 aa; hypothetical protein 2728506 2884064 ECA2415 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050510.1 2728063 D 218491 CDS YP_050511.1 50121344 2882329 complement(2728548..2728844) 1 NC_004547.2 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit alpha 2728844 ihfA 2882329 ihfA Pectobacterium atrosepticum SCRI1043 integration host factor subunit alpha YP_050511.1 2728548 R 218491 CDS YP_050512.1 50121345 2884714 complement(2728849..2731236) 1 NC_004547.2 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 2731236 pheT 2884714 pheT Pectobacterium atrosepticum SCRI1043 phenylalanyl-tRNA synthetase subunit beta YP_050512.1 2728849 R 218491 CDS YP_050513.1 50121346 2884713 complement(2731251..2732234) 1 NC_004547.2 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 2732234 pheS 2884713 pheS Pectobacterium atrosepticum SCRI1043 phenylalanyl-tRNA synthetase subunit alpha YP_050513.1 2731251 R 218491 CDS YP_050514.1 50121347 2883620 complement(2732547..2732903) 1 NC_004547.2 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 2732903 rplT 2883620 rplT Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L20 YP_050514.1 2732547 R 218491 CDS YP_050515.1 50121348 2884491 complement(2732947..2733144) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, Salmonella typhimurium, Salmonella typhi, and Shigella flexneri 50S ribosomal protein L35 rpmi or b1717 or z2746 or ecs2424 or stm1335 or sty1776 or sf1514 SWALL:RL35_ECOLI (SWALL:P07085) (64 aa) fasta scores: E(): 4.3e-23, 92.18% id in 64 aa; 50S ribosomal protein L35 2733144 rpmI 2884491 rpmI Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L35 YP_050515.1 2732947 R 218491 CDS YP_050516.1 50121349 2881772 complement(2733240..2733782) 1 NC_004547.2 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 2733782 infC 2881772 infC Pectobacterium atrosepticum SCRI1043 translation initiation factor IF-3 YP_050516.1 2733240 R 218491 CDS YP_050517.1 50121350 2884283 complement(2733785..2735713) 1 NC_004547.2 catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase 2735713 thrS 2884283 thrS Pectobacterium atrosepticum SCRI1043 threonyl-tRNA synthetase YP_050517.1 2733785 R 218491 CDS YP_050518.1 50121351 2883846 complement(2735993..2737369) 1 NC_004547.2 Similar to Escherichia coli aromatic amino acid transport protein AroP or b0112 SWALL:AROP_ECOLI (SWALL:P15993) (457 aa) fasta scores: E(): 4.4e-119, 68.28% id in 454 aa, and to Escherichia coli phenylalanine-specific permease PheP or b0576 SWALL:PHEP_ECOLI (SWALL:P24207) (458 aa) fasta scores: E(): 4.2e-117, 67.49% id in 443 aa; aromatic amino acid transport protein 2737369 2883846 ECA2423 Pectobacterium atrosepticum SCRI1043 aromatic amino acid transport protein YP_050518.1 2735993 R 218491 CDS YP_050519.1 50121352 2883847 complement(2737483..2737746) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1740 or y2567 SWALL:YH40_YERPE (SWALL:Q8ZFG9) (91 aa) fasta scores: E(): 4.3e-07, 46.51% id in 86 aa, and to Shigella flexneri orf, conserved hypothetical protein sf1401 SWALL:AAN43002 (EMBL:AE015164) (95 aa) fasta scores: E(): 4.6e-06, 36.36% id in 88 aa; hypothetical protein 2737746 2883847 ECA2424 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050519.1 2737483 R 218491 CDS YP_050520.1 50121353 2884866 complement(2737976..2738767) 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. atrosepticum KdgR repressor kdgR SWALL:Q8KM23 (EMBL:AJ504847) (263 aa) fasta scores: E(): 5.4e-99, 97.33% id in 263 aa, and to Erwinia chrysanthemi pectin degradation repressor protein KdgR SWALL:KDGR_ERWCH (SWALL:P37728) (305 aa) fasta scores: E(): 2.8e-92, 91.25% id in 263 aa; pectin degradation repressor 2738767 kdgR 2884866 kdgR Pectobacterium atrosepticum SCRI1043 pectin degradation repressor YP_050520.1 2737976 R 218491 CDS YP_050521.1 50121354 2883542 complement(2738982..2740148) 1 NC_004547.2 Similar to Erwinia chrysanthemi oligogalacturonate lyase Ogl SWALL:OGL_ERWCH (SWALL:P21258) (388 aa) fasta scores: E(): 1.1e-155, 87.85% id in 387 aa, and to Erwinia carotovora oligogalacturonide lyase Ogl SWALL:OGL_ERWCA (SWALL:Q59418) (388 aa) fasta scores: E(): 3.2e-171, 97.93% id in 388 aa; oligogalacturonate lyase 2740148 ogl 2883542 ogl Pectobacterium atrosepticum SCRI1043 oligogalacturonate lyase YP_050521.1 2738982 R 218491 CDS YP_050522.1 50121355 2883839 complement(2740491..2741372) 1 NC_004547.2 metalloprotease; heat shock protein HtpX 2741372 htpX 2883839 htpX Pectobacterium atrosepticum SCRI1043 heat shock protein HtpX YP_050522.1 2740491 R 218491 CDS YP_050523.1 50121356 2883848 complement(2741537..2742385) 1 NC_004547.2 Similar to Xanthomonas axonopodis glycerophosphodiester phosphodiesterase GlpQ or xac1147 SWALL:Q8PNC6 (EMBL:AE011744) (273 aa) fasta scores: E(): 1.4e-20, 32.25% id in 279 aa, and to Agrobacterium tumefaciens hypothetical protein atu4572 atu4572 or agr_l_598 SWALL:Q8U782 (EMBL:AE009385) (306 aa) fasta scores: E(): 1.1e-38, 39.31% id in 262 aa; glycerophosphoryl diester phosphodiesterase 2742385 2883848 ECA2428 Pectobacterium atrosepticum SCRI1043 glycerophosphoryl diester phosphodiesterase YP_050523.1 2741537 R 218491 CDS YP_050524.1 50121357 2883776 complement(2742416..2743753) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 glycerol-3-phosphate-binding periplasmic protein precursor UgpB or b3453 or z4822 or ecs4299 SWALL:UGPB_ECOLI (SWALL:P10904) (438 aa) fasta scores: E(): 2.4e-110, 62.67% id in 426 aa; glycerol-3-phosphate-binding periplasmic protein 2743753 2883776 ECA2429 Pectobacterium atrosepticum SCRI1043 glycerol-3-phosphate-binding periplasmic protein YP_050524.1 2742416 R 218491 CDS YP_050525.1 50121358 2883777 complement(2744004..2745227) 1 NC_004547.2 Similar to Escherichia coli hypothetical protein yhjx or b3547 SWALL:YHJX_ECOLI (SWALL:P37662) (402 aa) fasta scores: E(): 1.7e-63, 45.99% id in 387 aa, and to Archaeoglobus fulgidus oxalate/formate antiporter af0367 SWALL:O29880 (EMBL:AE001079) (397 aa) fasta scores: E(): 6.5e-38, 32.33% id in 399 aa; hypothetical protein 2745227 2883777 ECA2430 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050525.1 2744004 R 218491 CDS YP_050526.1 50121359 2883778 complement(2745411..2746160) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri hypothetical response regulatory protein ypdb or b2381 or z3646 or ecs3261 or sf2444.2 SWALL:YPDB_ECOLI (SWALL:P77742) (244 aa) fasta scores: E(): 1.6e-73, 75.9% id in 249 aa, and to Klebsiella pneumoniae MrkE protein MrkE SWALL:MRKE_KLEPN (SWALL:P21649) (269 aa) fasta scores: E(): 1e-49, 73.4% id in 188 aa; two-component response regulator 2746160 2883778 ECA2431 Pectobacterium atrosepticum SCRI1043 two-component response regulator YP_050526.1 2745411 R 218491 CDS YP_050527.1 50121360 2883779 complement(2746157..2747899) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein ypda or b2380 or z3645 or ecs3260 SWALL:YPDA_ECOLI (SWALL:P76523) (565 aa) fasta scores: E(): 1.9e-161, 75.67% id in 559 aa, and to Fusobacterium nucleatum autolysin sensor kinase fn0220 SWALL:Q8R6B2 (EMBL:AE010534) (541 aa) fasta scores: E(): 1e-73, 40.89% id in 538 aa; two-component sensor kinase 2747899 2883779 ECA2432 Pectobacterium atrosepticum SCRI1043 two-component sensor kinase YP_050527.1 2746157 R 218491 CDS YP_050528.1 50121361 2883603 complement(2748047..2750215) 1 NC_004547.2 Similar to Caulobacter crescentus sensory box/ggdef family protein cc3094 SWALL:Q9A3V7 (EMBL:AE005972) (748 aa) fasta scores: E(): 3.4e-74, 34.06% id in 731 aa, and to Rhizobium loti hypothetical protein Mll7787 SWALL:Q984Y8 (EMBL:AP003012) (724 aa) fasta scores: E(): 1.7e-66, 37.17% id in 581 aa; signaling protein 2750215 2883603 ECA2433 Pectobacterium atrosepticum SCRI1043 signaling protein YP_050528.1 2748047 R 218491 CDS YP_050529.1 50121362 2883604 complement(2750608..2750931) 1 NC_004547.2 hypothetical protein 2750931 2883604 ECA2434 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050529.1 2750608 R 218491 CDS YP_050530.1 50121363 2884506 2751259..2751993 1 NC_004547.2 Similar to Erwinia carotovora DNA-binding protein RdgA SWALL:RDGA_ERWCA (SWALL:Q47587) (244 aa) fasta scores: E(): 6.8e-85, 92.62% id in 244 aa, and to Bacteriophage phi-80 repressor protein CI SWALL:RPC1_BPPH8 (SWALL:P14819) (235 aa) fasta scores: E(): 1e-48, 58.67% id in 242 aa; regulator of pectin lyase production 2751993 rdgA 2884506 rdgA Pectobacterium atrosepticum SCRI1043 regulator of pectin lyase production YP_050530.1 2751259 D 218491 CDS YP_050531.1 50121364 2884507 2752447..2752797 1 NC_004547.2 Similar to Erwinia carotovora DNA-binding protein RdgB SWALL:RDGB_ERWCA (SWALL:Q47588) (117 aa) fasta scores: E(): 2.2e-41, 94.01% id in 117 aa, and to Bacteriophage Mu middle operon regulator Mor or 17 or e17 SWALL:VMOR_BPMU (SWALL:P23848) (129 aa) fasta scores: E(): 4.3e-06, 34.28% id in 105 aa; regulator of pectin lyase production 2752797 rdgB 2884507 rdgB Pectobacterium atrosepticum SCRI1043 regulator of pectin lyase production YP_050531.1 2752447 D 218491 CDS YP_050532.1 50121365 2883453 2753272..2754381 1 NC_004547.2 Similar to Escherichia coli electron transport protein yccm or b0992 SWALL:YCCM_ECOLI (SWALL:P52636) (357 aa) fasta scores: E(): 1.4e-90, 68.2% id in 368 aa, and to Shewanella oneidensis iron-sulfur cluster-binding protein so4404 SWALL:AAN57371 (EMBL:AE015873) (375 aa) fasta scores: E(): 2.5e-35, 38.57% id in 337 aa; electron transport protein 2754381 2883453 ECA2438 Pectobacterium atrosepticum SCRI1043 electron transport protein YP_050532.1 2753272 D 218491 CDS YP_050533.1 50121366 2882857 complement(2754499..2755752) 1 NC_004547.2 Converts isocitrate to alpha ketoglutarate; isocitrate dehydrogenase 2755752 icd 2882857 icd Pectobacterium atrosepticum SCRI1043 isocitrate dehydrogenase YP_050533.1 2754499 R 218491 CDS YP_050534.1 50121367 2883454 2755854..2756510 1 NC_004547.2 Similar to Yersinia pestis pseudouridine synthase ypo1640 or y1801 SWALL:Q8ZFQ3 (EMBL:AJ414149) (208 aa) fasta scores: E(): 9.5e-61, 69.71% id in 208 aa, and to Salmonella typhimurium ribosomal large subunit pseudouridine synthase ymfc or stm1237 SWALL:Q8ZPZ1 (EMBL:AE008754) (221 aa) fasta scores: E(): 4.4e-60, 69.44% id in 216 aa; RNA pseudouridylate synthase 2756510 2883454 ECA2440 Pectobacterium atrosepticum SCRI1043 RNA pseudouridylate synthase YP_050534.1 2755854 D 218491 CDS YP_050535.1 50121368 2883455 2756503..2756949 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri nudix hydrolase ymfb or b1134 or c1513 or z1863 or ecs1606 or sf1153 SWALL:YMFB_ECOLI (SWALL:P75965) (153 aa) fasta scores: E(): 2.6e-48, 75.67% id in 148 aa, and to Yersinia pestis hypothetical protein ypo1639 or y1800 SWALL:AAM85368 (EMBL:AJ414149) (148 aa) fasta scores: E(): 8.6e-46, 71.62% id in 148 aa; MutT family protein 2756949 2883455 ECA2441 Pectobacterium atrosepticum SCRI1043 MutT family protein YP_050535.1 2756503 D 218491 CDS YP_050536.1 50121369 2884241 2757088..2758194 1 NC_004547.2 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 2758194 mnmA 2884241 mnmA Pectobacterium atrosepticum SCRI1043 tRNA-specific 2-thiouridylase MnmA YP_050536.1 2757088 D 218491 CDS YP_050537.1 50121370 2883456 2758197..2758835 1 NC_004547.2 HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; hypothetical protein 2758835 2883456 ECA2443 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050537.1 2758197 D 218491 CDS YP_050538.1 50121371 2881844 2759027..2760397 1 NC_004547.2 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 2760397 purB 2881844 purB Pectobacterium atrosepticum SCRI1043 adenylosuccinate lyase YP_050538.1 2759027 D 218491 CDS YP_050539.1 50121372 2881648 2760640..2761329 1 NC_004547.2 response regulator in two-component regulatory system with PhoQ; involved in magnesium starvation and stress; DNA-binding transcriptional regulator PhoP 2761329 pehR 2881648 pehR Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional regulator PhoP YP_050539.1 2760640 D 218491 CDS YP_050540.1 50121373 2885348 2761326..2762780 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum sensor protein PehS SWALL:Q9ZIN8 (EMBL:AF022772) (484 aa) fasta scores: E(): 6.6e-176, 92.35% id in 484 aa, and to Erwinia chrysanthemi PhoQ protein phoQ SWALL:CAD33238 (EMBL:AJ489252) (491 aa) fasta scores: E(): 4.1e-152, 76.97% id in 482 aa; sensor protein PhoQ 2762780 pehS 2885348 pehS Pectobacterium atrosepticum SCRI1043 sensor protein PhoQ YP_050540.1 2761326 D 218491 CDS YP_050541.1 50121374 2883435 2762917..2764038 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo1632 SWALL:Q8ZFQ9 (EMBL:AJ414149) (373 aa) fasta scores: E(): 2.6e-125, 77.74% id in 373 aa, and to Escherichia coli hypothetical protein ycfd or b1128 SWALL:YCFD_ECOLI (SWALL:P27431) (373 aa) fasta scores: E(): 2.6e-124, 77.08% id in 371 aa; hypothetical protein 2764038 2883435 ECA2447 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050541.1 2762917 D 218491 CDS YP_050542.1 50121375 2885132 complement(2764123..2765355) 1 NC_004547.2 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 2765355 pepT 2885132 pepT Pectobacterium atrosepticum SCRI1043 peptidase T YP_050542.1 2764123 R 218491 CDS YP_050543.1 50121376 2883184 2765687..2766838 1 NC_004547.2 functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport; PotA is the membrane-associated ATPase; putrescine/spermidine ABC transporter ATPase 2766838 potA 2883184 potA Pectobacterium atrosepticum SCRI1043 putrescine/spermidine ABC transporter ATPase YP_050543.1 2765687 D 218491 CDS YP_050544.1 50121377 2883185 2766822..2767682 1 NC_004547.2 can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component; spermidine/putrescine ABC transporter membrane protein 2767682 potB 2883185 potB Pectobacterium atrosepticum SCRI1043 spermidine/putrescine ABC transporter membrane protein YP_050544.1 2766822 D 218491 CDS YP_050545.1 50121378 2883186 2767679..2768455 1 NC_004547.2 can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotC is a membrane component; spermidine/putrescine ABC transporter membrane protein 2768455 potC 2883186 potC Pectobacterium atrosepticum SCRI1043 spermidine/putrescine ABC transporter membrane protein YP_050545.1 2767679 D 218491 CDS YP_050546.1 50121379 2883076 2768546..2769589 1 NC_004547.2 can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotD is a periplasmic component that binds the substrate; spermidine/putrescine ABC transporter periplasmic substrate-binding protein 2769589 potD 2883076 potD Pectobacterium atrosepticum SCRI1043 spermidine/putrescine ABC transporter periplasmic substrate-binding protein YP_050546.1 2768546 D 218491 CDS YP_050547.1 50121380 2883544 complement(2769657..2770193) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri methylated-DNA--protein-cysteine methyltransferase Ogt or b1335 or sf1835 SWALL:OGT_ECOLI (SWALL:P09168) (171 aa) fasta scores: E(): 1.3e-13, 45.79% id in 107 aa, and to Mycoplasma penetrans 6-O-methylguanine DNA methyltransferas mype1850 SWALL:BAC43976 (EMBL:AP004170) (176 aa) fasta scores: E(): 1.1e-30, 46.51% id in 172 aa. Also similar to ECA2208 (40.331% id. in 181 aa overlap); methylated DNA--protein-cysteine methyltransferase 2770193 ogt 2883544 ogt Pectobacterium atrosepticum SCRI1043 methylated DNA--protein-cysteine methyltransferase YP_050547.1 2769657 R 218491 CDS YP_050548.1 50121381 2884054 complement(2770376..2771476) 1 NC_004547.2 Similar to Escherichia coli fosmidomycin resistance protein Fsr or b0479 SWALL:FSR_ECOLI (SWALL:P52067) (406 aa) fasta scores: E(): 3.6e-77, 56.46% id in 356 aa, and to Pseudomonas putida antibiotic mfs transporter, pp2366 SWALL:AAN67979 (EMBL:AE016782) (420 aa) fasta scores: E(): 2.2e-89, 62.29% id in 358 aa; fosmidomycin resistance protein 2771476 fsr 2884054 fsr Pectobacterium atrosepticum SCRI1043 fosmidomycin resistance protein YP_050548.1 2770376 R 218491 CDS YP_050549.1 50121382 2883436 <2771527..2771685 1 NC_004547.2 Partial CDS. Similar to the C-terminal regions of many including Pseudomonas aeruginosa probable transcriptional regulator pa2488 SWALL:Q9I0Z4 (EMBL:AE004676) (254 aa) fasta scores: E(): 0.0017, 50% id in 42 aa, and to Vibrio vulnificus arac-type DNA-binding domain-containing protein vv20956 SWALL:AAO07868 (EMBL:AE016811) (259 aa) fasta scores: E(): 0.0035, 48.78% id in 41 aa; transcriptional regulator 2771685 2883436 ECA2456 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_050549.1 <2771527 D 218491 CDS YP_050550.1 50121383 2883437 2771944..2772576 1 NC_004547.2 Similar to Thauera aromatica BbsI SWALL:Q9KJE6 (EMBL:AF173961) (209 aa) fasta scores: E(): 2.2e-39, 47.82% id in 207 aa, and to Xanthomonas campestris hypothetical protein Xcc0182 xcc0182 SWALL:Q8PE01 (EMBL:AE012114) (203 aa) fasta scores: E(): 5.5e-35, 46.63% id in 208 aa; hypothetical protein 2772576 2883437 ECA2457 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050550.1 2771944 D 218491 CDS YP_050551.1 50121384 2883366 2772573..2773439 1 NC_004547.2 Similar to Yersinia pestis AraC-family transcriptional regulatory protein ypo1837 SWALL:Q8ZF81 (EMBL:AJ414150) (291 aa) fasta scores: E(): 2.9e-17, 29.28% id in 239 aa, and to Salmonella typhimurium bacterial regulatory protein, arac family stm1082 SWALL:Q8ZQ62 (EMBL:AE008747) (259 aa) fasta scores: E(): 1.9e-16, 31.32% id in 249 aa; AraC family transcriptional regulator 2773439 2883366 ECA2458 Pectobacterium atrosepticum SCRI1043 AraC family transcriptional regulator YP_050551.1 2772573 D 218491 CDS YP_050552.1 50121385 2882305 complement(2773681..2775696) 1 NC_004547.2 Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; carboxy-terminal protease 2775696 prc 2882305 prc Pectobacterium atrosepticum SCRI1043 carboxy-terminal protease YP_050552.1 2773681 R 218491 CDS YP_050553.1 50121386 2885462 complement(2775716..2776465) 1 NC_004547.2 affects solute and DNA transport through an unknown mechanism; solute/DNA competence effector 2776465 proQ 2885462 proQ Pectobacterium atrosepticum SCRI1043 solute/DNA competence effector YP_050553.1 2775716 R 218491 CDS YP_050554.1 50121387 2883367 complement(2776550..2777056) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo1703 SWALL:Q8ZFK0 (EMBL:AJ414150) (165 aa) fasta scores: E(): 6.2e-43, 66.25% id in 160 aa, and to Shigella flexneri orf, conserved hypothetical protein yebr or sf1393 SWALL:AAN42994 (EMBL:AE015164) (165 aa) fasta scores: E(): 1.6e-41, 63.8% id in 163 aa; hypothetical protein 2777056 2883367 ECA2461 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050554.1 2776550 R 218491 CDS YP_050555.1 50121388 2883368 2777360..2778640 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo1702 or y1864 SWALL:AAM85431 (EMBL:AJ414150) (450 aa) fasta scores: E(): 7.4e-114, 68.47% id in 406 aa, and to Salmonella typhimurium inner membrane protein yebs or stm1848 SWALL:Q8ZNZ4 (EMBL:AE008782) (427 aa) fasta scores: E(): 1.7e-111, 65.69% id in 411 aa; hypothetical protein 2778640 2883368 ECA2462 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050555.1 2777360 D 218491 CDS YP_050556.1 50121389 2883369 2778643..2781285 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein y1863 SWALL:AAM85430 (EMBL:AE013789) (885 aa) fasta scores: E(): 0, 70.97% id in 882 aa, and to Escherichia coli hypothetical protein yebt or b1834 SWALL:YEBT_ECOLI (SWALL:P76272) (877 aa) fasta scores: E(): 0, 68.98% id in 877 aa; hypothetical protein 2781285 2883369 ECA2463 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050556.1 2778643 D 218491 CDS YP_050557.1 50121390 2883313 2781410..2782864 1 NC_004547.2 in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA; rRNA (cytosine-C(5)-)-methyltransferase RsmF 2782864 yebU 2883313 yebU Pectobacterium atrosepticum SCRI1043 rRNA (cytosine-C(5)-)-methyltransferase RsmF YP_050557.1 2781410 D 218491 CDS YP_050558.1 50121391 2883314 2782998..2783189 1 NC_004547.2 Similar to Escherichia coli hypothetical protein yebw yebw or b1837 SWALL:YEBW_ECOLI (SWALL:P76275) (63 aa) fasta scores: E(): 2e-19, 69.84% id in 63 aa, and to Salmonella typhi secreted protein sty1983 SWALL:Q8Z660 (EMBL:AL627272) (63 aa) fasta scores: E(): 1.6e-18, 65.07% id in 63 aa; hypothetical protein 2783189 2883314 ECA2465 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050558.1 2782998 D 218491 CDS YP_050559.1 50121392 2883286 complement(2783208..2783903) 1 NC_004547.2 Similar to Salmonella typhimurium inner membrane protein stm0381 SWALL:Q8ZRF2 (EMBL:AE008713) (237 aa) fasta scores: E(): 6.8e-42, 50.22% id in 227 aa, and to Pseudomonas putida conserved hypothetical protein pp1511 SWALL:AAN67132 (EMBL:AE016779) (229 aa) fasta scores: E(): 2e-31, 41.55% id in 231 aa; hypothetical protein 2783903 2883286 ECA2466 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050559.1 2783208 R 218491 CDS YP_050560.1 50121393 2883287 complement(2783943..2784188) 1 NC_004547.2 hypothetical protein 2784188 2883287 ECA2467 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050560.1 2783943 R 218491 CDS YP_050561.1 50121394 2883288 2784267..2784494 1 NC_004547.2 Similar to Salmonella typhimurium outer membrane protein ycfr or stm1214 SWALL:Q8ZQ03 (EMBL:AE008753) (85 aa) fasta scores: E(): 2.6e-06, 48.23% id in 85 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri hypothetical protein ybij precursor ybij or b0802 or c0886 or sf0752 SWALL:YBIJ_ECOLI (SWALL:P41038) (86 aa) fasta scores: E(): 1.3e-05, 52.32% id in 86 aa; hypothetical protein 2784494 2883288 ECA2468 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050561.1 2784267 D 218491 CDS YP_050562.1 50121395 2883289 2784750..2785232 1 NC_004547.2 Similar to Bradyrhizobium japonicum Bll0285 protein Bll0285 SWALL:BAC45550 (EMBL:AP005935) (134 aa) fasta scores: E(): 1.4e-09, 40.19% id in 102 aa; hypothetical protein 2785232 2883289 ECA2469 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050562.1 2784750 D 218491 CDS YP_050563.1 50121396 2883203 2785656..2785964 1 NC_004547.2 Similar to Shewanella oneidensis cold shock domain family protein so0733 SWALL:AAN53811 (EMBL:AE015518) (203 aa) fasta scores: E(): 1.3e-07, 47.14% id in 70 aa, and to Vibrio vulnificus cold shock domain family protein vv12532 SWALL:AAO10888 (EMBL:AE016805) (155 aa) fasta scores: E(): 5.8e-07, 57.5% id in 40 aa; hypothetical protein 2785964 2883203 ECA2470 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050563.1 2785656 D 218491 CDS YP_050564.1 50121397 2883919 complement(2786183..2786395) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri cold shock-like protein CspG or CspI or b0990 or c1123 or z1406 or ecs1145 or sf0991 SWALL:CSPG_ECOLI (SWALL:Q47130) (70 aa) fasta scores: E(): 8.2e-22, 80% id in 70 aa; cold shock protein 2786395 cspG 2883919 cspG Pectobacterium atrosepticum SCRI1043 cold shock protein YP_050564.1 2786183 R 218491 CDS YP_050565.1 50121398 2883204 complement(2786926..2787282) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri hypothetical protein yeby precursor yeby or b1839 or sf1850 SWALL:YEBY_ECOLI (SWALL:P76277) (113 aa) fasta scores: E(): 7.8e-23, 56.63% id in 113 aa, and to Yersinia pestis exported protein ypo1786 or y2521 SWALL:Q8ZFC8 (EMBL:AJ414150) (118 aa) fasta scores: E(): 1.1e-22, 57.14% id in 112 aa; hypothetical protein 2787282 2883204 ECA2472 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050565.1 2786926 R 218491 CDS YP_050566.1 50121399 2884055 complement(2787564..2788070) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri ferritin 1 SWALL:FTNA_ECOLI (SWALL:P23887) (165 aa) fasta scores: E(): 7.7e-40, 65.21% id in 161 aa; ferritin 2788070 ftnA 2884055 ftnA Pectobacterium atrosepticum SCRI1043 ferritin YP_050566.1 2787564 R 218491 CDS YP_050567.1 50121400 2882120 2788443..2788673 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri DNA polymerase III, theta subunit HolE or b1842 or c2252 or z2891 or ecs2552 or sf1852.1 SWALL:HOLE_ECOLI (SWALL:P28689) (76 aa) fasta scores: E(): 8.7e-18, 67.1% id in 76 aa; DNA polymerase III subunit theta 2788673 holE 2882120 holE Pectobacterium atrosepticum SCRI1043 DNA polymerase III subunit theta YP_050567.1 2788443 D 218491 CDS YP_050568.1 50121401 2881863 complement(2789028..2791079) 1 NC_004547.2 Similar to Escherichia coli protease II PtrB or Tlp or b1845 SWALL:PTRB_ECOLI (SWALL:P24555) (686 aa) fasta scores: E(): 2e-180, 63.93% id in 671 aa; protease II 2791079 ptrB 2881863 ptrB Pectobacterium atrosepticum SCRI1043 protease II YP_050568.1 2789028 R 218491 CDS YP_050569.1 50121402 2884640 2791280..2792458 1 NC_004547.2 non-folate utilizing enzyme, catalyzes the production of beta-formyl glycinamide ribonucleotide from formate, ATP, and beta-GAR and a side reaction producing acetyl phosphate and ADP from acetate and ATP; involved in de novo purine biosynthesis; phosphoribosylglycinamide formyltransferase 2 2792458 purT 2884640 purT Pectobacterium atrosepticum SCRI1043 phosphoribosylglycinamide formyltransferase 2 YP_050569.1 2791280 D 218491 CDS YP_050570.1 50121403 2881725 complement(2792647..2793288) 1 NC_004547.2 catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase 2793288 eda 2881725 eda Pectobacterium atrosepticum SCRI1043 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase YP_050570.1 2792647 R 218491 CDS YP_050571.1 50121404 2882467 complement(2793456..2794931) 1 NC_004547.2 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 2794931 zwf 2882467 zwf Pectobacterium atrosepticum SCRI1043 glucose-6-phosphate 1-dehydrogenase YP_050571.1 2793456 R 218491 CDS YP_050572.1 50121405 2881801 2795320..2796189 1 NC_004547.2 Represses the expression of the zwf, eda, glp and gap; DNA-binding transcriptional regulator HexR 2796189 hexR 2881801 hexR Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional regulator HexR YP_050572.1 2795320 D 218491 CDS YP_050573.1 50121406 2882672 2796565..2798007 1 NC_004547.2 catalyzes the formation of phosphoenolpyruvate from pyruvate; pyruvate kinase 2798007 pykA 2882672 pykA Pectobacterium atrosepticum SCRI1043 pyruvate kinase YP_050573.1 2796565 D 218491 CDS YP_050574.1 50121407 2881207 complement(2798118..2799095) 1 NC_004547.2 Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 2799095 msbB 2881207 msbB Pectobacterium atrosepticum SCRI1043 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase YP_050574.1 2798118 R 218491 CDS YP_050575.1 50121408 2883205 complement(2799272..2800594) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri hypothetical metalloprotease yeba precursor yeba or b1856 or c2270 or sf1866 SWALL:YEBA_ECOLI (SWALL:P24204) (440 aa) fasta scores: E(): 6.7e-128, 75.11% id in 442 aa, and to Salmonella typhimurium peptidase yeba or stm1890 SWALL:Q8ZNV9 (EMBL:AE008784) (439 aa) fasta scores: E(): 5.8e-128, 75.05% id in 441 aa; hypothetical protein 2800594 2883205 ECA2483 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050575.1 2799272 R 218491 CDS YP_050576.1 50121409 2882473 complement(2800607..2801608) 1 NC_004547.2 involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter periplasmic protein 2801608 znuA 2882473 znuA Pectobacterium atrosepticum SCRI1043 high-affinity zinc transporter periplasmic protein YP_050576.1 2800607 R 218491 CDS YP_050577.1 50121410 2882465 2801685..2802443 1 NC_004547.2 involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter ATPase 2802443 znuC 2882465 znuC Pectobacterium atrosepticum SCRI1043 high-affinity zinc transporter ATPase YP_050577.1 2801685 D 218491 CDS YP_050578.1 50121411 2882464 2802440..2803225 1 NC_004547.2 involved in transport of zinc(II) with ZnuA and C; high-affinity zinc transporter membrane protein 2803225 znuB 2882464 znuB Pectobacterium atrosepticum SCRI1043 high-affinity zinc transporter membrane protein YP_050578.1 2802440 D 218491 CDS YP_050579.1 50121412 2883088 complement(2803319..2804281) 1 NC_004547.2 Similar to Haemophilus influenzae galactose operon repressor GalR or GalS or hi0821 SWALL:GALR_HAEIN (SWALL:P31766) (332 aa) fasta scores: E(): 5.7e-09, 31.02% id in 303 aa, and to Staphylococcus xylosus probable catabolite control protein A CcpA SWALL:CCPA_STAXY (SWALL:Q56194) (329 aa) fasta scores: E(): 2.5e-08, 26.36% id in 311 aa; LacI family transcriptional regulator 2804281 2883088 ECA2487 Pectobacterium atrosepticum SCRI1043 LacI family transcriptional regulator YP_050579.1 2803319 R 218491 CDS YP_050580.1 50121413 2883089 2804738..2806048 1 NC_004547.2 Similar to Lactobacillus casei PTS system, lactose-specific IIbc component LacE SWALL:PTLB_LACCA (SWALL:P24400) (577 aa) fasta scores: E(): 7.3e-42, 30.84% id in 428 aa, and to Vibrio cholerae PTS system, cellobiose-specific iic component vc1282 SWALL:Q9KSH4 (EMBL:AE004207) (446 aa) fasta scores: E(): 2.2e-93, 47.67% id in 430 aa; PTS system cellobiose-specific transporter subunit IIC 2806048 2883089 ECA2488 Pectobacterium atrosepticum SCRI1043 PTS system cellobiose-specific transporter subunit IIC YP_050580.1 2804738 D 218491 CDS YP_050581.1 50121414 2883090 2806364..2806672 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri PTS system, cellobiose-specific IIa component CelC or b1736 or c2135 or z2766 or ecs2442 or sf1490 SWALL:PTCA_ECOLI (SWALL:P17335) (116 aa) fasta scores: E(): 1.8e-14, 48.45% id in 97 aa; PTS system cellobiose-specific transporter subunit IIA 2806672 2883090 ECA2489 Pectobacterium atrosepticum SCRI1043 PTS system cellobiose-specific transporter subunit IIA YP_050581.1 2806364 D 218491 CDS YP_050582.1 50121415 2883091 2806843..2808222 1 NC_004547.2 Weakly similar to Klebsiella pneumoniae maltoporin precursor LamB SWALL:LAMB_KLEPN (SWALL:P31242) (429 aa) fasta scores: E(): 7.1e-14, 25.87% id in 398 aa, and to Escherichia coli maltoporin precursor LamB or MalB or b4036 SWALL:LAMB_ECOLI (SWALL:P02943) (446 aa) fasta scores: E(): 3.4e-05, 24.11% id in 394 aa; maltoporin 2808222 2883091 ECA2490 Pectobacterium atrosepticum SCRI1043 maltoporin YP_050582.1 2806843 D 218491 CDS YP_050583.1 50121416 2884445 complement(2808294..2809298) 1 NC_004547.2 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 2809298 ruvB 2884445 ruvB Pectobacterium atrosepticum SCRI1043 Holliday junction DNA helicase RuvB YP_050583.1 2808294 R 218491 CDS YP_050584.1 50121417 2884444 complement(2809306..2809923) 1 NC_004547.2 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 2809923 ruvA 2884444 ruvA Pectobacterium atrosepticum SCRI1043 Holliday junction DNA helicase RuvA YP_050584.1 2809306 R 218491 CDS YP_050585.1 50121418 2884439 complement(2810151..2810663) 1 NC_004547.2 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 2810663 ruvC 2884439 ruvC Pectobacterium atrosepticum SCRI1043 Holliday junction resolvase YP_050585.1 2810151 R 218491 CDS YP_050586.1 50121419 2885589 complement(2810744..2811487) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo2055 SWALL:Q8ZEU8 (EMBL:AJ414151) (247 aa) fasta scores: E(): 2.7e-83, 91.09% id in 247 aa, and to Escherichia coli protein yebc or b1864 SWALL:YEBC_ECOLI (SWALL:P24237) (246 aa) fasta scores: E(): 4.9e-81, 87.44% id in 247 aa; hypothetical protein 2811487 2885589 ECA2494 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050586.1 2810744 R 218491 CDS YP_050587.1 50121420 2884893 complement(2811511..2811954) 1 NC_004547.2 converts dATP to dAMP and pyrophosphate; dATP pyrophosphohydrolase 2811954 ntpA 2884893 ntpA Pectobacterium atrosepticum SCRI1043 dATP pyrophosphohydrolase YP_050587.1 2811511 R 218491 CDS YP_050588.1 50121421 2882888 complement(2811956..2813755) 1 NC_004547.2 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 2813755 aspS 2882888 aspS Pectobacterium atrosepticum SCRI1043 aspartyl-tRNA synthetase YP_050588.1 2811956 R 218491 CDS YP_050589.1 50121422 2885590 2814296..2815513 1 NC_004547.2 Similar to Vibrio vulnificus predicted signal transduction protein vv12911 SWALL:AAO11244 (EMBL:AE016806) (404 aa) fasta scores: E(): 4.7e-60, 41.33% id in 404 aa, and to Bacillus subtilis hypothetical protein YuxH SWALL:YUXH_BACSU (SWALL:P14203) (409 aa) fasta scores: E(): 6e-34, 30.26% id in 413 aa; signal transduction protein 2815513 2885590 ECA2497 Pectobacterium atrosepticum SCRI1043 signal transduction protein YP_050589.1 2814296 D 218491 CDS YP_050590.1 50121423 2882947 2815601..2816095 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2052 or y2259 SWALL:Q8ZEV1 (EMBL:AJ414151) (271 aa) fasta scores: E(): 6.2e-52, 74.84% id in 159 aa, and to Salmonella typhimurium, and Salmonella typhi cytoplasmic protein yece or stm1903 or sty2111 SWALL:Q8XFY8 (EMBL:AE008785) (272 aa) fasta scores: E(): 2.2e-46, 66.25% id in 160 aa; hypothetical protein 2816095 2882947 ECA2498 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050590.1 2815601 D 218491 CDS YP_050591.1 50121424 2882948 complement(2816171..2816962) 1 NC_004547.2 Similar to Shigella flexneri orf, hypothetical protein sf1053 SWALL:AAN42675 (EMBL:AE015133) (167 aa) fasta scores: E(): 3.2e-16, 43.42% id in 152 aa; hypothetical protein 2816962 2882948 ECA2499 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050591.1 2816171 R 218491 CDS YP_050592.1 50121425 2882949 complement(2816962..2819196) 1 NC_004547.2 DNA-binding protein 2819196 2882949 ECA2500 Pectobacterium atrosepticum SCRI1043 DNA-binding protein YP_050592.1 2816962 R 218491 CDS YP_050593.1 50121426 2882950 complement(2819423..2820118) 1 NC_004547.2 hypothetical protein 2820118 2882950 ECA2501 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050593.1 2819423 R 218491 CDS YP_050594.1 50121427 2885459 complement(2820115..2820354) 1 NC_004547.2 hypothetical protein 2820354 2885459 ECA2502 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050594.1 2820115 R 218491 CDS YP_050595.1 50121428 2885460 complement(2820771..2820968) 1 NC_004547.2 Similar to Paramecium bursaria chlorella virus 1 A641L protein a641L SWALL:O41123 (EMBL:U42580) (85 aa) fasta scores: E(): 9.9, 36.36% id in 44 aa; phage-like protein 2820968 2885460 ECA2503 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_050595.1 2820771 R 218491 CDS YP_050596.1 50121429 2885461 complement(2821764..2822402) 1 NC_004547.2 Similar to Escherichia coli resolvase ParA SWALL:PAA4_ECOLI (SWALL:P22996) (219 aa) fasta scores: E(): 6.8e-15, 32.81% id in 192 aa, and to Agrobacterium tumefaciens resolvase ParA or atu3849 or agr_l_1981 SWALL:Q8U979 (EMBL:AE009315) (250 aa) fasta scores: E(): 5.3e-41, 59.11% id in 203 aa; resolvase 2822402 2885461 ECA2504 Pectobacterium atrosepticum SCRI1043 resolvase YP_050596.1 2821764 R 218491 CDS YP_050597.1 50121430 2881558 2823149..2823316 1 NC_004547.2 hypothetical protein 2823316 2881558 ECA2505 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050597.1 2823149 D 218491 CDS YP_050598.1 50121431 2881559 complement(2823641..2824555) 1 NC_004547.2 hypothetical protein 2824555 2881559 ECA2506 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050598.1 2823641 R 218491 CDS YP_050599.1 50121432 2881560 complement(2825271..2826881) 1 NC_004547.2 Similar to Bacillus subtilis DNA recombinase CisA or spoivcA SWALL:CISA_BACSU (SWALL:P17867) (500 aa) fasta scores: E(): 0.03, 23.63% id in 440 aa, and to Staphylococcus aureus cassette chromosome recombinase B CcrB SWALL:Q8RPD2 (EMBL:AF411935) (442 aa) fasta scores: E(): 7e-05, 23.07% id in 442 aa, and to Bacteriophage U153 u153 InTegrase Int SWALL:Q8LTD8 (EMBL:AJ417489) (452 aa) fasta scores: E(): 0.77, 23.1% id in 489 aa; integrase/recombinase 2826881 2881560 ECA2508 Pectobacterium atrosepticum SCRI1043 integrase/recombinase YP_050599.1 2825271 R 218491 CDS YP_050600.1 50121433 2881561 <2826929..2827279 1 NC_004547.2 Similar to the C-terminal regions of Yersinia pestis hypothetical protein ypo2052 or y2259 SWALL:Q8ZEV1 (EMBL:AJ414151) (271 aa) fasta scores: E(): 1.2e-23, 58.26% id in 115 aa, and to Salmonella typhimurium, and Salmonella typhi cytoplasmic protein yece or stm1903 or sty2111 SWALL:Q8XFY8 (EMBL:AE008785) (272 aa) fasta scores: E(): 2.6e-21, 54.78% id in 115 aa; hypothetical protein 2827279 2881561 ECA2509 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050600.1 <2826929 D 218491 CDS YP_050601.1 50121434 2881984 2827436..2827831 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo2051 or y2260 SWALL:Q8ZEV2 (EMBL:AJ414151) (131 aa) fasta scores: E(): 8.2e-45, 81.53% id in 130 aa, and to Salmonella typhimurium, and Salmonella typhi inner membrane protein yecn or stm1904 or sty2112 SWALL:Q8XFZ4 (EMBL:AE008785) (131 aa) fasta scores: E(): 1.2e-40, 71.75% id in 131 aa; hypothetical protein 2827831 2881984 ECA2510 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050601.1 2827436 D 218491 CDS YP_050602.1 50121435 2881985 2828026..2828805 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2050 or y2261 SWALL:AAM85821 (EMBL:AJ414151) (267 aa) fasta scores: E(): 2.9e-78, 80% id in 250 aa, and to Escherichia coli protein yeco or b1870 SWALL:YECO_ECOLI (SWALL:P76290) (247 aa) fasta scores: E(): 4.3e-78, 80.56% id in 247 aa; hypothetical protein 2828805 2881985 ECA2511 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050602.1 2828026 D 218491 CDS YP_050603.1 50121436 2881900 2828802..2829785 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2049 or y2262 SWALL:Q8ZEV4 (EMBL:AJ414151) (323 aa) fasta scores: E(): 1.3e-113, 81.42% id in 323 aa, and to Salmonella typhi hypothetical protein Sty2114 SWALL:Q8Z5W0 (EMBL:AL627272) (323 aa) fasta scores: E(): 2.8e-105, 76.78% id in 323 aa; hypothetical protein 2829785 2881900 ECA2512 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050603.1 2828802 D 218491 CDS YP_050604.1 50121437 2881901 complement(2830278..2830577) 1 NC_004547.2 hypothetical protein 2830577 2881901 ECA2513 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050604.1 2830278 R 218491 CDS YP_050605.1 50121438 2881902 complement(2830707..2831090) 1 NC_004547.2 hypothetical protein 2831090 2881902 ECA2514 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050605.1 2830707 R 218491 CDS YP_050606.1 50121439 2881903 2831105..2831689 1 NC_004547.2 hypothetical protein 2831689 2881903 ECA2515 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050606.1 2831105 D 218491 CDS YP_050607.1 50121440 2882136 2831703..2832305 1 NC_004547.2 hypothetical protein 2832305 2882136 ECA2516 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050607.1 2831703 D 218491 CDS YP_050608.1 50121441 2882137 2832686..2832958 1 NC_004547.2 hypothetical protein 2832958 2882137 ECA2517 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050608.1 2832686 D 218491 CDS YP_050609.1 50121442 2883377 complement(2833114..2833872) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri copper homeostasis protein CutC or CutCM or b1874 or sf1915 SWALL:CUTC_ECOLI (SWALL:P46719) (248 aa) fasta scores: E(): 1.9e-55, 57.74% id in 239 aa; copper homeostasis protein CutC 2833872 cutC 2883377 cutC Pectobacterium atrosepticum SCRI1043 copper homeostasis protein CutC YP_050609.1 2833114 R 218491 CDS YP_050610.1 50121443 2882138 complement(2834311..2834895) 1 NC_004547.2 Similar to Escherichia coli protein yecm or b1875 SWALL:YECM_ECOLI (SWALL:P52007) (188 aa) fasta scores: E(): 1.5e-43, 59.88% id in 177 aa, and to Salmonella typhi hypothetical protein Sty2116 SWALL:Q8Z5V8 (EMBL:AL627272) (189 aa) fasta scores: E(): 1.4e-42, 58.98% id in 178 aa; hypothetical protein 2834895 2882138 ECA2519 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050610.1 2834311 R 218491 CDS YP_050611.1 50121444 2884135 2835515..2837245 1 NC_004547.2 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 2837245 argS 2884135 argS Pectobacterium atrosepticum SCRI1043 arginyl-tRNA synthetase YP_050611.1 2835515 D 218491 CDS YP_050612.1 50121445 2885297 complement(2837343..2838878) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 virulence factor MviN homolog MviN or b1069 or z1707 or ecs1447 SWALL:MVIN_ECOLI (SWALL:P75932) (511 aa) fasta scores: E(): 1.2e-160, 81.99% id in 511 aa, and to Yersinia pestis membrane protein mvin or ypo2043 or y2269 SWALL:AAM85829 (EMBL:AJ414151) (511 aa) fasta scores: E(): 5.1e-165, 84.51% id in 510 aa; virulence factor 2838878 mviN 2885297 mviN Pectobacterium atrosepticum SCRI1043 virulence factor YP_050612.1 2837343 R 218491 CDS YP_050613.1 50121446 2885296 complement(2839006..2839971) 1 NC_004547.2 Similar to Salmonella typhimurium virulence factor MviM or stm1169 SWALL:MVIM_SALTY (SWALL:P37168) (307 aa) fasta scores: E(): 2.9e-71, 63.3% id in 297 aa, and to Escherichia coli virulence factor MviM homolog MviM or b1068 SWALL:MVIM_ECOLI (SWALL:P75931) (307 aa) fasta scores: E(): 1.2e-67, 60% id in 300 aa; virulence factor 2839971 mviM 2885296 mviM Pectobacterium atrosepticum SCRI1043 virulence factor YP_050613.1 2839006 R 218491 CDS YP_050614.1 50121447 2882055 complement(2840001..2840639) 1 NC_004547.2 Similar to Escherichia coli hypothetical protein yceh or b1067 SWALL:YCEH_ECOLI (SWALL:P29217) (215 aa) fasta scores: E(): 2e-56, 72.64% id in 212 aa, and to Salmonella typhimurium, and Salmonella typhi cytoplasmic protein yceh or stm1168 or sty1206 SWALL:Q8XF09 (EMBL:AE008750) (215 aa) fasta scores: E(): 1.9e-54, 69.81% id in 212 aa; hypothetical protein 2840639 2882055 ECA2523 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050614.1 2840001 R 218491 CDS YP_050615.1 50121448 2884735 complement(2840649..2841233) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri ribosomal-protein-alanine acetyltransferase RimJ or b1066 or z1703 or ecs1444 or sf1072 SWALL:RIMJ_ECOLI (SWALL:P09454) (194 aa) fasta scores: E(): 3.3e-67, 77.31% id in 194 aa; ribosomal-protein-S5-alanine N-acetyltransferase 2841233 rimJ 2884735 rimJ Pectobacterium atrosepticum SCRI1043 ribosomal-protein-S5-alanine N-acetyltransferase YP_050615.1 2840649 R 218491 CDS YP_050616.1 50121449 2882056 2841548..2842753 1 NC_004547.2 Confers resistance to norfloxacin and enoxacin; multidrug resistance protein MdtH 2842753 2882056 ECA2525 Pectobacterium atrosepticum SCRI1043 multidrug resistance protein MdtH YP_050616.1 2841548 D 218491 CDS YP_050617.1 50121450 2884047 2842935..2843582 1 NC_004547.2 cofactor involved in the reduction of disulfides; glutaredoxin 2843582 grxB 2884047 grxB Pectobacterium atrosepticum SCRI1043 glutaredoxin YP_050617.1 2842935 D 218491 CDS YP_050618.1 50121451 2882057 2843769..2844335 1 NC_004547.2 Similar to Yersinia pestis lipoprotein ypo2039 SWALL:Q8ZEW4 (EMBL:AJ414151) (187 aa) fasta scores: E(): 2.6e-47, 73.93% id in 188 aa, and to Escherichia coli, and Shigella flexneri lipoprotein yceb precursor yceb or b1063 or sf1069 SWALL:YCEB_ECOLI (SWALL:P09995) (186 aa) fasta scores: E(): 2.3e-40, 65.02% id in 183 aa; hypothetical protein 2844335 2882057 ECA2527 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050618.1 2843769 D 218491 CDS YP_050619.1 50121452 2882058 complement(2844408..2844986) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2038 or y2274 SWALL:AAM85834 (EMBL:AJ414151) (186 aa) fasta scores: E(): 2.8e-45, 67.22% id in 180 aa, and to Escherichia coli hypothetical protein ycdy or b1035 SWALL:YCDY_ECOLI (SWALL:P75915) (184 aa) fasta scores: E(): 1.1e-41, 60.42% id in 187 aa; hypothetical protein 2844986 2882058 ECA2528 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050619.1 2844408 R 218491 CDS YP_050620.1 50121453 2881513 complement(2845033..2845770) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo2037 SWALL:Q8ZEW6 (EMBL:AJ414151) (245 aa) fasta scores: E(): 1.1e-84, 84.89% id in 245 aa, and to Salmonella typhimurium, and Salmonella typhi histidinol phosphatase and related hydrolases of the php family ycdx or stm1136 or sty1173 SWALL:Q8XGW8 (EMBL:AE008749) (245 aa) fasta scores: E(): 1.8e-76, 75.1% id in 245 aa; hydrolase 2845770 2881513 ECA2529 Pectobacterium atrosepticum SCRI1043 hydrolase YP_050620.1 2845033 R 218491 CDS YP_050621.1 50121454 2881514 complement(2846431..2847990) 1 NC_004547.2 Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 2.1e-53, 42.66% id in 525 aa, and to Ralstonia solanacearum probable methyl-accepting chemotaxis transducer transmembrane protein rsc1155 or rs04596 SWALL:Q8Y089 (EMBL:AL646063) (629 aa) fasta scores: E(): 5e-74, 47.39% id in 538 aa; methyl-accepting chemotaxis protein 2847990 2881514 ECA2530 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_050621.1 2846431 R 218491 CDS YP_050622.1 50121455 2881562 complement(2848900..2849466) 1 NC_004547.2 Similar to Yersinia pestis lipoprotein protein ypo1422 or y2746 SWALL:Q8ZG84 (EMBL:AJ414148) (192 aa) fasta scores: E(): 4.8e-43, 62.43% id in 189 aa, and to Salmonella typhimurium, and Salmonella typhi outer membrane protein ymba or stm1065 or sty1086 SWALL:Q8XG15 (EMBL:AE008746) (187 aa) fasta scores: E(): 2.6e-38, 54.54% id in 187 aa; lipoprotein 2849466 2881562 ECA2531 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_050622.1 2848900 R 218491 CDS YP_050623.1 50121456 2882333 complement(2849466..2851106) 1 NC_004547.2 Similar to Escherichia coli paraquat-inducible protein B PqiB or Pqi5b or b0951 SWALL:PQIB_ECOLI (SWALL:P43671) (546 aa) fasta scores: E(): 3.8e-141, 66.72% id in 544 aa; paraquat-inducible protein B 2851106 pqiB 2882333 pqiB Pectobacterium atrosepticum SCRI1043 paraquat-inducible protein B YP_050623.1 2849466 R 218491 CDS YP_050624.1 50121457 2882332 complement(2851093..2852337) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri paraquat-inducible protein A PqiA or Pqi5a or b0950 or c1086 or sf0951 SWALL:PQIA_ECOLI (SWALL:P43670) (417 aa) fasta scores: E(): 3.7e-111, 66.42% id in 411 aa; paraquat-inducible protein A 2852337 pqiA 2882332 pqiA Pectobacterium atrosepticum SCRI1043 paraquat-inducible protein A YP_050624.1 2851093 R 218491 CDS YP_050625.1 50121458 2882958 complement(2852540..2854450) 1 NC_004547.2 Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; ABC transporter ATPase 2854450 uup 2882958 uup Pectobacterium atrosepticum SCRI1043 ABC transporter ATPase YP_050625.1 2852540 R 218491 CDS YP_050626.1 50121459 2881563 complement(2854454..2856571) 1 NC_004547.2 catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; 23S rRNA m(2)G2445 methyltransferase 2856571 rlmL 2881563 rlmL Pectobacterium atrosepticum SCRI1043 23S rRNA m(2)G2445 methyltransferase YP_050626.1 2854454 R 218491 CDS YP_050627.1 50121460 2881564 2856685..2857788 1 NC_004547.2 Similar to Yersinia pestis iron-sulfur binding protein ypo1417 or y2752 SWALL:Q8ZG89 (EMBL:AJ414148) (370 aa) fasta scores: E(): 1.8e-107, 70.76% id in 366 aa, and to Salmonella typhimurium iron-sulfur protein stm1060 SWALL:Q8ZQ74 (EMBL:AE008746) (369 aa) fasta scores: E(): 1.3e-97, 65.04% id in 369 aa; iron-sulfur binding protein 2857788 2881564 ECA2536 Pectobacterium atrosepticum SCRI1043 iron-sulfur binding protein YP_050627.1 2856685 D 218491 CDS YP_050628.1 50121461 2881565 complement(2857854..2858441) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1416 or y2753 SWALL:AAM86305 (EMBL:AJ414148) (183 aa) fasta scores: E(): 2e-44, 62.42% id in 173 aa, and to Escherichia coli hypothetical protein ycbw or b0946 SWALL:YCBW_ECOLI (SWALL:P75862) (180 aa) fasta scores: E(): 7.3e-42, 60.47% id in 167 aa; hypothetical protein 2858441 2881565 ECA2537 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050628.1 2857854 R 218491 CDS YP_050629.1 50121462 2882670 complement(2858643..2859653) 1 NC_004547.2 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 2859653 pyrD 2882670 pyrD Pectobacterium atrosepticum SCRI1043 dihydroorotate dehydrogenase 2 YP_050629.1 2858643 R 218491 CDS YP_050630.1 50121463 2885190 complement(2859857..2862472) 1 NC_004547.2 Similar to Escherichia coli aminopeptidase N PepN or b0932 SWALL:AMPN_ECOLI (SWALL:P04825) (869 aa) fasta scores: E(): 0, 75.66% id in 867 aa; aminopeptidase 2862472 pepN 2885190 pepN Pectobacterium atrosepticum SCRI1043 aminopeptidase YP_050630.1 2859857 R 218491 CDS YP_050631.1 50121464 2883276 2862696..2863901 1 NC_004547.2 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; nicotinate phosphoribosyltransferase 2863901 pncB 2883276 pncB Pectobacterium atrosepticum SCRI1043 nicotinate phosphoribosyltransferase YP_050631.1 2862696 D 218491 CDS YP_050632.1 50121465 2885587 2864092..2865492 1 NC_004547.2 catalyzes a two-step reaction, first charging an asparagine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; asparaginyl-tRNA synthetase 2865492 asnC 2885587 asnC Pectobacterium atrosepticum SCRI1043 asparaginyl-tRNA synthetase YP_050632.1 2864092 D 218491 CDS YP_050633.1 50121466 2883329 2865788..2866900 1 NC_004547.2 Similar to Escherichia coli outer membrane protein N precursor OmpN or b1377 SWALL:OMPN_ECOLI (SWALL:P77747) (377 aa) fasta scores: E(): 1.1e-76, 53.86% id in 388 aa; outer membrane protein 2866900 ompN 2883329 ompN Pectobacterium atrosepticum SCRI1043 outer membrane protein YP_050633.1 2865788 D 218491 CDS YP_050634.1 50121467 2885554 2867225..2868415 1 NC_004547.2 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 2868415 aspC 2885554 aspC Pectobacterium atrosepticum SCRI1043 aromatic amino acid aminotransferase YP_050634.1 2867225 D 218491 CDS YP_050635.1 50121468 2881486 complement(2868487..2869134) 1 NC_004547.2 Similar to Yersinia pestis metallo-beta-lactamase superfamily protein ypo1409 or y2761 SWALL:Q8ZG96 (EMBL:AJ414148) (215 aa) fasta scores: E(): 8.9e-67, 72.55% id in 215 aa, and to Escherichia coli hypothetical protein ycbl or b0927 SWALL:YCBL_ECOLI (SWALL:P75849) (215 aa) fasta scores: E(): 3.5e-65, 70.23% id in 215 aa; metallo-beta-lactamase 2869134 2881486 ECA2544 Pectobacterium atrosepticum SCRI1043 metallo-beta-lactamase YP_050635.1 2868487 R 218491 CDS YP_050636.1 50121469 2881487 complement(2869216..2869764) 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo1408 or y2762 SWALL:Q8ZG97 (EMBL:AJ414148) (182 aa) fasta scores: E(): 4.6e-60, 82.41% id in 182 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein ycbk or b0926 or c1068 or z1273 or ecs1009 or sf0923 SWALL:YCBK_ECOLI (SWALL:P75848) (182 aa) fasta scores: E(): 5.1e-56, 78.57% id in 182 aa; hypothetical protein 2869764 2881487 ECA2545 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050636.1 2869216 R 218491 CDS YP_050637.1 50121470 2881488 complement(2869944..2871686) 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo1407 or y2763 SWALL:AAM86315 (EMBL:AJ414148) (618 aa) fasta scores: E(): 1.4e-92, 60.48% id in 615 aa, and to Vibrio cholerae hypothetical protein Vc1268 SWALL:Q9KSI8 (EMBL:AE004206) (524 aa) fasta scores: E(): 7.1e-47, 36.56% id in 495 aa; hypothetical protein 2871686 2881488 ECA2546 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050637.1 2869944 R 218491 CDS YP_050638.1 50121471 2881597 complement(2872108..2876547) 1 NC_004547.2 SMC (structural maintenance of chromosomes) family of proteins; involved in chromosome condensatin and partitioning; forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ; mutations result in cell division defects; cell division protein MukB 2876547 mukB 2881597 mukB Pectobacterium atrosepticum SCRI1043 cell division protein MukB YP_050638.1 2872108 R 218491 CDS YP_050639.1 50121472 2881702 complement(2876601..2877296) 1 NC_004547.2 acts with MukB and MukF to condense the chromosome and allow for segregation during cell division; condesin subunit E 2877296 mukE 2881702 mukE Pectobacterium atrosepticum SCRI1043 condesin subunit E YP_050639.1 2876601 R 218491 CDS YP_050640.1 50121473 2881703 complement(2877304..2878629) 1 NC_004547.2 acts with MukB and MukE to condense the chromosome and allow for segregation during cell division; condesin subunit F 2878629 mukF 2881703 mukF Pectobacterium atrosepticum SCRI1043 condesin subunit F YP_050640.1 2877304 R 218491 CDS YP_050641.1 50121474 2884377 complement(2878626..2879411) 1 NC_004547.2 involved in cellular zinc and cadmium homeostasis by binding excess metal ions to its cysteine sulfurs and histidine nitrogens; expression of smtA in cyanobacteria is repressed by SmtB at low concentrations of zinc; NO elicits release of Zn ions from SmtA; metallothionein SmtA 2879411 smtA 2884377 smtA Pectobacterium atrosepticum SCRI1043 metallothionein SmtA YP_050641.1 2878626 R 218491 CDS YP_050642.1 50121475 2881416 2879580..2880428 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein ycbc or b0920 or z1267 or ecs1003 SWALL:YCBC_ECOLI (SWALL:P36565) (259 aa) fasta scores: E(): 2.7e-64, 65.25% id in 259 aa, and to Salmonella typhi membrane protein sty0992 SWALL:Q8Z7Z8 (EMBL:AL627268) (258 aa) fasta scores: E(): 6.7e-65, 66.02% id in 259 aa; hypothetical protein 2880428 2881416 ECA2551 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050642.1 2879580 D 218491 CDS YP_050643.1 50121476 2881417 complement(2880380..2881273) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo1401 SWALL:Q8ZGA3 (EMBL:AJ414148) (297 aa) fasta scores: E(): 4.9e-98, 73.4% id in 297 aa, and to Salmonella typhimurium mukf protein stm0989 SWALL:Q8ZQB9 (EMBL:AE008742) (297 aa) fasta scores: E(): 2e-77, 58.78% id in 296 aa; hypothetical protein 2881273 2881417 ECA2552 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050643.1 2880380 R 218491 CDS YP_050644.1 50121477 2881418 complement(2881677..2883083) 1 NC_004547.2 Similar to Erwinia chrysanthemi pectate lyase L precursor PelL SWALL:PELL_ERWCH (SWALL:Q47473) (425 aa) fasta scores: E(): 9.3e-21, 39.57% id in 422 aa, and to Erwinia chrysanthemi pectate lyase PelL1 SWALL:Q9RP65 (EMBL:AF171228) (425 aa) fasta scores: E(): 2.9e-20, 37.79% id in 418 aa; pectate lyase 2883083 2881418 ECA2553 Pectobacterium atrosepticum SCRI1043 pectate lyase YP_050644.1 2881677 R 218491 CDS YP_050645.1 50121478 2884537 complement(2883416..2884168) 1 NC_004547.2 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 2884168 kdsB 2884537 kdsB Pectobacterium atrosepticum SCRI1043 3-deoxy-manno-octulosonate cytidylyltransferase YP_050645.1 2883416 R 218491 CDS YP_050646.1 50121479 2881419 complement(2884165..2884347) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo1399 SWALL:Q8ZGA5 (EMBL:AJ414148) (60 aa) fasta scores: E(): 7.1e-19, 85.96% id in 57 aa, and to Salmonella typhimurium, and Salmonella typhi inner membrane protein ycar or stm0987 or sty0989 SWALL:Q8XEM5 (EMBL:AE008742) (60 aa) fasta scores: E(): 9.9e-17, 75.43% id in 57 aa; hypothetical protein 2884347 2881419 ECA2555 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050646.1 2884165 R 218491 CDS YP_050647.1 50121480 2882687 complement(2884459..2885460) 1 NC_004547.2 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 2885460 lpxK 2882687 lpxK Pectobacterium atrosepticum SCRI1043 tetraacyldisaccharide 4'-kinase YP_050647.1 2884459 R 218491 CDS YP_050648.1 50121481 2882004 complement(2885457..2887241) 1 NC_004547.2 involved in the transport of lipid A across the inner membrane; lipid transporter ATP-binding protein/permease 2887241 msbA 2882004 msbA Pectobacterium atrosepticum SCRI1043 lipid transporter ATP-binding protein/permease YP_050648.1 2885457 R 218491 CDS YP_050649.1 50121482 2881914 complement(2887243..2889516) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo1394 or y2778 SWALL:Q8ZGB0 (EMBL:AJ414148) (763 aa) fasta scores: E(): 7.2e-161, 50.19% id in 763 aa, and to Salmonella typhi competence-related protein sty0984 SWALL:Q8Z802 (EMBL:AL627268) (754 aa) fasta scores: E(): 7.2e-126, 42.52% id in 762 aa; hypothetical protein 2889516 2881914 ECA2558 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050649.1 2887243 R 218491 CDS YP_050650.1 50121483 2881915 complement(2889900..2890358) 1 NC_004547.2 Similar to Yersinia pestis, and Yersinia pseudotuberculosis transposase for the IS1541 insertion element SWALL:Q9X9F5 (EMBL:AJ414159) (152 aa) fasta scores: E(): 4.9e-63, 96.05% id in 152 aa; transposase for the IS1541 insertion element 2890358 2881915 ECA2559 Pectobacterium atrosepticum SCRI1043 transposase for the IS1541 insertion element YP_050650.1 2889900 R 218491 CDS YP_050651.1 50121484 2881951 complement(2890553..2890870) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo1560 SWALL:Q8ZFW5 (EMBL:AJ414149) (105 aa) fasta scores: E(): 3e-31, 94.28% id in 105 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri hypothetical protein YeeX or b2007 or c2534 or sf2067 SWALL:YEEX_ECOLI (SWALL:P76367) (109 aa) fasta scores: E(): 3.5e-27, 85.14% id in 101 aa; hypothetical protein 2890870 2881951 ECA2560 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050651.1 2890553 R 218491 CDS YP_050652.1 50121485 2881952 complement(2891200..2891958) 1 NC_004547.2 Similar to Yersinia pestis iron ABC transporter, ATP-binding protein ypo4025 or FecE or y4046 SWALL:AAM87590 (EMBL:AJ414160) (252 aa) fasta scores: E(): 2.1e-63, 72.61% id in 252 aa, and to Brucella melitensis iron bmeii0604 SWALL:Q8YCC8 (EMBL:AE009696) (252 aa) fasta scores: E(): 1.6e-54, 61.75% id in 251 aa; iron ABC transporter ATP-binding protein 2891958 2881952 ECA2561 Pectobacterium atrosepticum SCRI1043 iron ABC transporter ATP-binding protein YP_050652.1 2891200 R 218491 CDS YP_050653.1 50121486 2881953 complement(2891955..2892962) 1 NC_004547.2 Similar to Yersinia pestis iron transport permease ypo4024 SWALL:Q8ZA02 (EMBL:AJ414160) (335 aa) fasta scores: E(): 3.2e-76, 66.13% id in 313 aa, and to Agrobacterium tumefaciens ABC transporter, membrane spanning protein atu2475 or agr_c_4491 SWALL:Q8UCK8 (EMBL:AE009194) (322 aa) fasta scores: E(): 8.2e-58, 51.63% id in 306 aa; iron ABC transporter permease 2892962 2881953 ECA2562 Pectobacterium atrosepticum SCRI1043 iron ABC transporter permease YP_050653.1 2891955 R 218491 CDS YP_050654.1 50121487 2881954 complement(2892949..2893911) 1 NC_004547.2 Similar to Yersinia pestis iron transport permease ypo4023 or y4044 SWALL:Q8ZA03 (EMBL:AJ414160) (319 aa) fasta scores: E(): 2.3e-88, 73.18% id in 317 aa, and to Agrobacterium tumefaciens ABC transporter, membrane spanning protein atu2474 or agr_c_4489 SWALL:Q8UCK9 (EMBL:AE009194) (321 aa) fasta scores: E(): 5.5e-66, 55.76% id in 321 aa; iron ABC transporter permease 2893911 2881954 ECA2563 Pectobacterium atrosepticum SCRI1043 iron ABC transporter permease YP_050654.1 2892949 R 218491 CDS YP_050655.1 50121488 2885264 complement(2893923..2894873) 1 NC_004547.2 Similar to Yersinia pestis solute-binding iron ABC transport protein y4043 SWALL:AAM87587 (EMBL:AE014006) (329 aa) fasta scores: E(): 4.7e-74, 62.54% id in 315 aa, and to Brucella melitensis ferric anguibactin-binding protein bmeii0607 SWALL:Q8YCC5 (EMBL:AE009697) (293 aa) fasta scores: E(): 1.2e-49, 48.09% id in 289 aa; iron ABC transporter priplasmic binding protein 2894873 2885264 ECA2564 Pectobacterium atrosepticum SCRI1043 iron ABC transporter priplasmic binding protein YP_050655.1 2893923 R 218491 CDS YP_050656.1 50121489 2884432 2895155..2896582 1 NC_004547.2 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; exonuclease I 2896582 sbcB 2884432 sbcB Pectobacterium atrosepticum SCRI1043 exonuclease I YP_050656.1 2895155 D 218491 CDS YP_050657.1 50121490 2885265 complement(2896643..2898013) 1 NC_004547.2 Similar to Yersinia pestis amino acid permease ypo1557 or y2612 SWALL:Q8ZFW8 (EMBL:AJ414149) (463 aa) fasta scores: E(): 7.8e-146, 82.96% id in 446 aa, and to Salmonella enterica subsp. enterica serovar Typhi Ty2 amino acid transporter protein yeef or t0806 SWALL:AAO68497 (EMBL:AE016836) (454 aa) fasta scores: E(): 7.5e-138, 77.35% id in 446 aa; amino acid permease 2898013 2885265 ECA2566 Pectobacterium atrosepticum SCRI1043 amino acid permease YP_050657.1 2896643 R 218491 CDS YP_050658.1 50121491 2885266 complement(2898003..2898245) 1 NC_004547.2 hypothetical protein 2898245 2885266 ECA2567 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050658.1 2898003 R 218491 CDS YP_050659.1 50121492 2885229 complement(2898658..2899413) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3220 or y0968 SWALL:Q8ZC10 (EMBL:AJ414156) (252 aa) fasta scores: E(): 2.3e-48, 50.8% id in 250 aa, and to Salmonella typhimurium inner membrane protein ycgr or stm1798 SWALL:Q8ZP19 (EMBL:AE008780) (244 aa) fasta scores: E(): 9.8e-33, 42.73% id in 241 aa; hypothetical protein 2899413 2885229 ECA2568 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050659.1 2898658 R 218491 CDS YP_050660.1 50121493 2884969 complement(2899810..2900715) 1 NC_004547.2 Similar to Escherichia coli 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase CitG or b0613 SWALL:CITG_ECOLI (SWALL:P77231) (292 aa) fasta scores: E(): 2.3e-42, 50% id in 262 aa, and to Klebsiella pneumoniae 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase CitG SWALL:CITG_KLEPN (SWALL:P45414) (302 aa) fasta scores: E(): 1.3e-48, 53.33% id in 270 aa; 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase 2900715 citG 2884969 citG Pectobacterium atrosepticum SCRI1043 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase YP_050660.1 2899810 R 218491 CDS YP_050661.1 50121494 2884961 complement(2900693..2901220) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 apo-citrate lyase phosphoribosyl-dephospho-CoA transferase citx or b0614 or z0758 or ecs0653 SWALL:CITX_ECOLI (SWALL:P77563) (183 aa) fasta scores: E(): 6.7e-24, 40.85% id in 164 aa; apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 2901220 citX 2884961 citX Pectobacterium atrosepticum SCRI1043 apo-citrate lyase phosphoribosyl-dephospho-CoA transferase YP_050661.1 2900693 R 218491 CDS YP_050662.1 50121495 2884968 complement(2901247..2902776) 1 NC_004547.2 Similar to Klebsiella pneumoniae citrate lyase alpha chain CitF SWALL:CILA_KLEPN (SWALL:P45413) (508 aa) fasta scores: E(): 1.3e-132, 67.52% id in 508 aa, and to Escherichia coli citrate lyase alpha chain citf or b0615 SWALL:CILA_ECOLI (SWALL:P75726) (510 aa) fasta scores: E(): 4.6e-131, 67.25% id in 510 aa; citrate lyase subunit alpha 2902776 citF 2884968 citF Pectobacterium atrosepticum SCRI1043 citrate lyase subunit alpha YP_050662.1 2901247 R 218491 CDS YP_050663.1 50121496 2884967 complement(2902830..2903705) 1 NC_004547.2 Similar to Klebsiella pneumoniae citrate lyase beta chain CitE SWALL:CILB_KLEPN (SWALL:P17725) (289 aa) fasta scores: E(): 1.3e-80, 72.56% id in 288 aa, and to Escherichia coli, and Escherichia coli O6 citrate lyase beta chain CitE or b0616 or c0706 SWALL:CILB_ECOLI (SWALL:P77770) (302 aa) fasta scores: E(): 2.7e-74, 65.17% id in 290 aa; citrate lyase subunit beta 2903705 citE 2884967 citE Pectobacterium atrosepticum SCRI1043 citrate lyase subunit beta YP_050663.1 2902830 R 218491 CDS YP_050664.1 50121497 2884973 complement(2903705..2903995) 1 NC_004547.2 acyl carrier protein; with CitE and CitF catalyzes the formation of oxaloacetate from citrate; citrate lyase subunit gamma 2903995 citD 2884973 citD Pectobacterium atrosepticum SCRI1043 citrate lyase subunit gamma YP_050664.1 2903705 R 218491 CDS YP_050665.1 50121498 2884972 complement(2904019..2905083) 1 NC_004547.2 Similar to Klebsiella pneumoniae [citrate [pro-3s]-lyase] ligase CitC SWALL:CITC_KLEPN (SWALL:P45410) (342 aa) fasta scores: E(): 7.6e-56, 43.24% id in 333 aa, and to Escherichia coli [citrate [pro-3s]-lyase] ligase CitC or b0618 SWALL:CITC_ECOLI (SWALL:P77390) (352 aa) fasta scores: E(): 4.6e-57, 46.43% id in 351 aa; [citrate (pro-3S)-lyase] ligase 2905083 citC 2884972 citC Pectobacterium atrosepticum SCRI1043 [citrate (pro-3S)-lyase] ligase YP_050665.1 2904019 R 218491 CDS YP_050666.1 50121499 2885230 complement(2905173..2906057) 1 NC_004547.2 Similar to Burkholderia cepacia DntG SWALL:Q8VUC7 (EMBL:AF169302) (281 aa) fasta scores: E(): 8.5e-37, 43.61% id in 282 aa, and to Salmonella typhimurium fumarylacetoacetate stm0331 SWALL:Q8ZRI8 (EMBL:AE008710) (292 aa) fasta scores: E(): 1.7e-68, 62.45% id in 285 aa; fumarylacetoacetate hydrolase 2906057 2885230 ECA2575 Pectobacterium atrosepticum SCRI1043 fumarylacetoacetate hydrolase YP_050666.1 2905173 R 218491 CDS YP_050667.1 50121500 2884966 complement(2906175..2907545) 1 NC_004547.2 Similar to Klebsiella pneumoniae citrate/acetate antiporter CitW SWALL:Q8VS41 (EMBL:AF411142) (454 aa) fasta scores: E(): 1.9e-136, 76.75% id in 456 aa; citrate/acetate antiporter 2907545 citW 2884966 citW Pectobacterium atrosepticum SCRI1043 citrate/acetate antiporter YP_050667.1 2906175 R 218491 CDS YP_050668.1 50121501 2884970 2907965..2909560 1 NC_004547.2 Similar to Klebsiella pneumoniae sensor kinase CitA SWALL:CITA_KLEPN (SWALL:P52687) (547 aa) fasta scores: E(): 4.7e-85, 44.8% id in 529 aa; two-component sensor kinase 2909560 citA 2884970 citA Pectobacterium atrosepticum SCRI1043 two-component sensor kinase YP_050668.1 2907965 D 218491 CDS YP_050669.1 50121502 2884971 2909647..2910348 1 NC_004547.2 Similar to Klebsiella pneumoniae transcriptional regulatory protein CitB SWALL:CITB_KLEPN (SWALL:P52688) (234 aa) fasta scores: E(): 7.4e-29, 41.59% id in 226 aa; two-component response regulator 2910348 citB 2884971 citB Pectobacterium atrosepticum SCRI1043 two-component response regulator YP_050669.1 2909647 D 218491 CDS YP_050670.1 50121503 2885231 2910808..2912742 1 NC_004547.2 Similar to Salmonella typhimurium methyl-accepting chemotaxis citrate transducer Tcp or stm3577 SWALL:MCPC_SALTY (SWALL:Q02755) (547 aa) fasta scores: E(): 2.9e-54, 41.59% id in 553 aa, and to Yersinia pestis methyl-accepting chemotaxis protein II Tar or ypo4062 or tsr or y4081 SWALL:AAM87624 (EMBL:AJ414160) (649 aa) fasta scores: E(): 2.1e-72, 43.39% id in 643 aa; methyl-accepting chemotaxis citrate transducer 2912742 2885231 ECA2579 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis citrate transducer YP_050670.1 2910808 D 218491 CDS YP_050671.1 50121504 2885137 2913047..2914987 1 NC_004547.2 Similar to Salmonella typhimurium methyl-accepting chemotaxis citrate transducer Tcp or stm3577 SWALL:MCPC_SALTY (SWALL:Q02755) (547 aa) fasta scores: E(): 3.7e-57, 47.48% id in 438 aa, and to Yersinia pestis methyl-accepting chemotaxis protein II tar or ypo4062 or tsr or y4081 SWALL:AAM87624 (EMBL:AJ414160) (649 aa) fasta scores: E(): 1.1e-70, 41.68% id in 643 aa; methyl-accepting chemotaxis citrate transducer 2914987 2885137 ECA2580 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis citrate transducer YP_050671.1 2913047 D 218491 CDS YP_050672.1 50121505 2885138 complement(2915069..2915911) 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo1551 or y2617 SWALL:Q8ZFX2 (EMBL:AJ414149) (275 aa) fasta scores: E(): 4.4e-71, 65.81% id in 275 aa, and to Shigella flexneri enzyme of sugar metabolism yeez or sf2075 SWALL:AAN43615 (EMBL:AE015223) (274 aa) fasta scores: E(): 2.7e-69, 64.23% id in 274 aa; hypothetical protein 2915911 2885138 ECA2581 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050672.1 2915069 R 218491 CDS YP_050673.1 50121506 2882633 2916384..2917283 1 NC_004547.2 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; ATP phosphoribosyltransferase 2917283 hisG 2882633 hisG Pectobacterium atrosepticum SCRI1043 ATP phosphoribosyltransferase YP_050673.1 2916384 D 218491 CDS YP_050674.1 50121507 2882559 2917289..2918617 1 NC_004547.2 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 2918617 hisD 2882559 hisD Pectobacterium atrosepticum SCRI1043 histidinol dehydrogenase YP_050674.1 2917289 D 218491 CDS YP_050675.1 50121508 2882558 2918614..2919687 1 NC_004547.2 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 2919687 hisC 2882558 hisC Pectobacterium atrosepticum SCRI1043 histidinol-phosphate aminotransferase YP_050675.1 2918614 D 218491 CDS YP_050676.1 50121509 2882544 2919703..2920770 1 NC_004547.2 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; imidazole glycerol-phosphate dehydratase/histidinol phosphatase 2920770 hisB 2882544 hisB Pectobacterium atrosepticum SCRI1043 imidazole glycerol-phosphate dehydratase/histidinol phosphatase YP_050676.1 2919703 D 218491 CDS YP_050677.1 50121510 2882634 2920770..2921360 1 NC_004547.2 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; imidazole glycerol phosphate synthase subunit HisH 2921360 hisH 2882634 hisH Pectobacterium atrosepticum SCRI1043 imidazole glycerol phosphate synthase subunit HisH YP_050677.1 2920770 D 218491 CDS YP_050678.1 50121511 2882543 2921367..2922104 1 NC_004547.2 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2922104 hisA 2882543 hisA Pectobacterium atrosepticum SCRI1043 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_050678.1 2921367 D 218491 CDS YP_050679.1 50121512 2882560 2922086..2922862 1 NC_004547.2 catalyzes the conversion of 5-[(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino]- 1-(5-phosphoribosyl)imidazole-4-carboxamideand glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamideribonucleotide and glutamate; the HisF subunit acts as a cyclase; imidazole glycerol phosphate synthase subunit HisF 2922862 hisF 2882560 hisF Pectobacterium atrosepticum SCRI1043 imidazole glycerol phosphate synthase subunit HisF YP_050679.1 2922086 D 218491 CDS YP_050680.1 50121513 2882635 2922856..2923488 1 NC_004547.2 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase 2923488 hisI 2882635 hisI Pectobacterium atrosepticum SCRI1043 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase YP_050680.1 2922856 D 218491 CDS YP_050681.1 50121514 2882330 complement(2923649..2923933) 1 NC_004547.2 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; integration host factor subunit beta 2923933 ihfB 2882330 ihfB Pectobacterium atrosepticum SCRI1043 integration host factor subunit beta YP_050681.1 2923649 R 218491 CDS YP_050682.1 50121515 2884477 complement(2924025..2925698) 1 NC_004547.2 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 2925698 rpsA 2884477 rpsA Pectobacterium atrosepticum SCRI1043 30S ribosomal protein S1 YP_050682.1 2924025 R 218491 CDS YP_050683.1 50121516 2884956 complement(2925815..2926492) 1 NC_004547.2 Catalyzes the formation of (d)CDP from ATP and (d)CMP; cytidylate kinase 2926492 cmk 2884956 cmk Pectobacterium atrosepticum SCRI1043 cytidylate kinase YP_050683.1 2925815 R 218491 CDS YP_050684.1 50121517 2884136 complement(2926713..2928002) 1 NC_004547.2 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 2928002 aroA 2884136 aroA Pectobacterium atrosepticum SCRI1043 3-phosphoshikimate 1-carboxyvinyltransferase YP_050684.1 2926713 R 218491 CDS YP_050685.1 50121518 2884404 complement(2928085..2929170) 1 NC_004547.2 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; phosphoserine aminotransferase 2929170 serC 2884404 serC Pectobacterium atrosepticum SCRI1043 phosphoserine aminotransferase YP_050685.1 2928085 R 218491 CDS YP_050686.1 50121519 2885139 2929563..2931326 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo1385 SWALL:Q8ZGB8 (EMBL:AJ414148) (588 aa) fasta scores: E(): 5.2e-206, 84.24% id in 584 aa, and to Escherichia coli hypothetical protein ycao or b0905 SWALL:YCAO_ECOLI (SWALL:P75838) (586 aa) fasta scores: E(): 1.9e-200, 81.84% id in 584 aa; hypothetical protein 2931326 2885139 ECA2595 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050686.1 2929563 D 218491 CDS YP_050687.1 50121520 2885385 2931779..2932639 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 probable formate transporter 1 FocA or FocA_2 or b0904 or c1042 or z1250 or ecs0987 SWALL:FOCA_ECOLI (SWALL:P21501) (285 aa) fasta scores: E(): 8.3e-94, 80.7% id in 285 aa; formate transporter 2932639 focA 2885385 focA Pectobacterium atrosepticum SCRI1043 formate transporter YP_050687.1 2931779 D 218491 CDS YP_050688.1 50121521 2885796 2932697..2934979 1 NC_004547.2 Similar to Escherichia coli formate acetyltransferase 1 PflB or Pfl or b0903 SWALL:PFLB_ECOLI (SWALL:P09373) (759 aa) fasta scores: E(): 0, 91.3% id in 759 aa; formate acetyltransferase 2934979 pflB 2885796 pflB Pectobacterium atrosepticum SCRI1043 formate acetyltransferase YP_050688.1 2932697 D 218491 CDS YP_050689.1 50121522 2885779 2935461..2935850 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty4599 SWALL:Q8Z1G8 (EMBL:AL627283) (125 aa) fasta scores: E(): 0.32, 26.08% id in 115 aa; hypothetical protein 2935850 2885779 ECA2598 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050689.1 2935461 D 218491 CDS YP_050690.1 50121523 2885780 complement(2935893..2936141) 1 NC_004547.2 Similar to Escherichia coli prophage P2 Ogr protein OgrK or b2082 SWALL:OGRK_ECOLI (SWALL:P37057) (72 aa) fasta scores: E(): 2.1e-07, 50.98% id in 51 aa, and to Salmonella typhi bacteriophage gene regulatory protein sty4826 SWALL:Q8Z107 (EMBL:AL627283) (79 aa) fasta scores: E(): 2.2e-08, 48.43% id in 64 aa, and to Bacteriophage 186 late control gene B protein B SWALL:VPB_BP186 (SWALL:P08711) (72 aa) fasta scores: E(): 7.6e-08, 45.76% id in 59 aa. Also similar to ECA0414 (39.726% id. in 55 aa overlap), and to ECA3454 (43.836% id. in 50 aa overlap), and to ECA0833 (39.216% id. in 51 aa overlap).; bacteriophage regulatory protein 2936141 2885780 ECA2599 Pectobacterium atrosepticum SCRI1043 bacteriophage regulatory protein YP_050690.1 2935893 R 218491 CDS YP_050691.1 50121524 2885781 complement(2936178..2937215) 1 NC_004547.2 Similar to Bacteriophage 186 late control gene D protein D SWALL:VPD_BP186 (SWALL:P21679) (389 aa) fasta scores: E(): 1.2e-40, 52.23% id in 358 aa, and to Salmonella typhi regulator of late gene expression sty3702 or sty2882 SWALL:Q8XG84 (EMBL:AL627279) (366 aa) fasta scores: E(): 2.1e-66, 53.48% id in 344 aa; bacteriophage late gene control protein D 2937215 2885781 ECA2600 Pectobacterium atrosepticum SCRI1043 bacteriophage late gene control protein D YP_050691.1 2936178 R 218491 CDS YP_050692.1 50121525 2885782 2937468..2938652 1 NC_004547.2 Similar to Bacteriophage P2 major tail sheath protein FI SWALL:VPF1_BPP2 (SWALL:P22501) (395 aa) fasta scores: E(): 3.9e-74, 50% id in 392 aa, and to Escherichia coli O157:H7 tail sheath protein of prophage cp-933t z2991 or ecs2645 SWALL:Q8XBE2 (EMBL:AE005413) (394 aa) fasta scores: E(): 1.2e-109, 69.19% id in 396 aa; major tail sheath protein FI 2938652 2885782 ECA2601 Pectobacterium atrosepticum SCRI1043 major tail sheath protein FI YP_050692.1 2937468 D 218491 CDS YP_050693.1 50121526 2884709 2938653..2939168 1 NC_004547.2 Similar to Bacteriophage P2 major tail tube protein FII SWALL:VPF2_BPP2 (SWALL:P22502) (171 aa) fasta scores: E(): 8e-20, 41.52% id in 171 aa, and to Escherichia coli O157:H7 tail fiber component of prophage cp-933t z2990 or ecs2644 SWALL:Q8XBE3 (EMBL:AE005413) (170 aa) fasta scores: E(): 7.5e-42, 65.88% id in 170 aa; major tail tube protein FII 2939168 2884709 ECA2602 Pectobacterium atrosepticum SCRI1043 major tail tube protein FII YP_050693.1 2938653 D 218491 CDS YP_050694.1 50121527 2884710 2939282..2939590 1 NC_004547.2 Similar to Bacteriophage P2 Gpe SWALL:O64313 (EMBL:AF063097) (91 aa) fasta scores: E(): 1.8e-05, 40% id in 85 aa, and to Salmonella typhi phage tail protein sty3698 or sty2886 SWALL:Q8XFW3 (EMBL:AL627279) (100 aa) fasta scores: E(): 2e-06, 40.74% id in 81 aa; phage tail protein E 2939590 2884710 ECA2603 Pectobacterium atrosepticum SCRI1043 phage tail protein E YP_050694.1 2939282 D 218491 CDS YP_050695.1 50121528 2884711 2939611..2939751 1 NC_004547.2 Similar to Bacteriophage P2 gpE' SWALL:O64312 (EMBL:AF063097) (142 aa) fasta scores: E(): 2.4e-08, 58.14% id in 43 aa and Bacteriophage 186 orf52 H SWALL:O80316 (EMBL:U32222) (58 aa) fasta scores: E(): 1.1e-08, 59.52% id in 42 aa; phage tail protein E' 2939751 2884711 ECA2604 Pectobacterium atrosepticum SCRI1043 phage tail protein E' YP_050695.1 2939611 D 218491 CDS YP_050696.1 50121529 2884712 2939738..2942668 1 NC_004547.2 Similar to Bacteriophage P2 gpt T SWALL:O64314 (EMBL:AF063097) (815 aa) fasta scores: E(): 1.1e-43, 31.97% id in 807 aa and Bacteriophage phi CTX orf25 SWALL:Q9ZXK0 (EMBL:AB008550) (904 aa) fasta scores: E(): 1.7e-45, 30.66% id in 923 aa; bacteriophage tail fiber protein T (tape measure) 2942668 2884712 ECA2605 Pectobacterium atrosepticum SCRI1043 bacteriophage tail fiber protein T (tape measure) YP_050696.1 2939738 D 218491 CDS YP_050697.1 50121530 2884664 2942681..2943172 1 NC_004547.2 Similar to Bacteriophage P2 gpu U SWALL:O64315 (EMBL:AF063097) (159 aa) fasta scores: E(): 4.5e-20, 48.8% id in 125 aa. Also similar to Bacteriophage 186 F protein F SWALL:O80317 (EMBL:U32222) (161 aa) fasta scores: E(): 2.4e-22, 44.78% id in 163 aa; bacteriophage tail fiber protein U 2943172 2884664 ECA2606 Pectobacterium atrosepticum SCRI1043 bacteriophage tail fiber protein U YP_050697.1 2942681 D 218491 CDS YP_050698.1 50121531 2884665 complement(2943293..2943910) 1 NC_004547.2 Similar to Bacteriophage P2 probable tail fiber assembly protein G SWALL:TFA_BPP2 (SWALL:P26699) (175 aa) fasta scores: E(): 0.00029, 34.01% id in 147 aa, and to Bacteriophage lambda tail fiber assembly protein tfA SWALL:TFA_LAMBD (SWALL:P03740) (194 aa) fasta scores: E(): 1.3e-18, 36.11% id in 180 aa; bacteriophage tail fiber assembly protein G 2943910 2884665 ECA2607 Pectobacterium atrosepticum SCRI1043 bacteriophage tail fiber assembly protein G YP_050698.1 2943293 R 218491 CDS YP_050699.1 50121532 2884777 complement(2943910..2945520) 1 NC_004547.2 Similar to Bacteriophage P2 probable tail fiber protein H SWALL:VPH_BPP2 (SWALL:P26700) (669 aa) fasta scores: E(): 9.6e-27, 37.55% id in 442 aa and Bacteriophage GMSE-1 probable tail fiber protein SWALL:Q9B027 (EMBL:AF311651) (497 aa) fasta scores: E(): 4.1e-49, 56.43% id in 264 aa; bacteriophage variable tail fiber protein H 2945520 2884777 ECA2608 Pectobacterium atrosepticum SCRI1043 bacteriophage variable tail fiber protein H YP_050699.1 2943910 R 218491 CDS YP_050700.1 50121533 2884778 complement(2945517..2946122) 1 NC_004547.2 Similar to Bacteriophage P2 tail protein I SWALL:VPI_BPP2 (SWALL:P26701) (176 aa) fasta scores: E(): 1.8e-40, 57.14% id in 175 aa, and to Escherichia coli O6 phage tail protein c0966 SWALL:AAN79439 (EMBL:AE016758) (201 aa) fasta scores: E(): 6e-49, 57.28% id in 199 aa; phage tail protein I 2946122 2884778 ECA2609 Pectobacterium atrosepticum SCRI1043 phage tail protein I YP_050700.1 2945517 R 218491 CDS YP_050701.1 50121534 2884779 complement(2946115..2947011) 1 NC_004547.2 Similar to Bacteriophage P2 baseplate assembly protein GpJ SWALL:VPJ_BPP2 (SWALL:P51767) (302 aa) fasta scores: E(): 1.8e-56, 54.48% id in 301 aa and to Bacteriophage 186 GpL SWALL:Q37840 (EMBL:U32222) (302 aa) fasta scores: E(): 3.2e-57, 54.81% id in 301 aa; phage baseplate assembly protein J 2947011 2884779 ECA2610 Pectobacterium atrosepticum SCRI1043 phage baseplate assembly protein J YP_050701.1 2946115 R 218491 CDS YP_050702.1 50121535 2884780 complement(2946998..2947366) 1 NC_004547.2 Similar to Bacteriophage P2 baseplate assembly protein W SWALL:VPW_BPP2 (SWALL:P51768) (115 aa) fasta scores: E(): 2.5e-15, 46.72% id in 107 aa, and to Salmonella typhi phage baseplate assembly protein sty3688 SWALL:Q8Z345 (EMBL:AL627279) (119 aa) fasta scores: E(): 4.7e-16, 45.29% id in 117 aa; phage baseplate assembly protein W 2947366 2884780 ECA2611 Pectobacterium atrosepticum SCRI1043 phage baseplate assembly protein W YP_050702.1 2946998 R 218491 CDS YP_050703.1 50121536 2884813 complement(2947363..2947944) 1 NC_004547.2 Similar to Bacteriophage P2 baseplate assembly protein V SWALL:VPV_BPP2 (SWALL:P31340) (211 aa) fasta scores: E(): 5.6e-19, 42.64% id in 204 aa, and to Salmonella typhi phage baseplate assembly protein sty3687 SWALL:Q8Z346 (EMBL:AL627279) (192 aa) fasta scores: E(): 7e-20, 37.89% id in 190 aa; baseplate assembly protein V 2947944 2884813 ECA2612 Pectobacterium atrosepticum SCRI1043 baseplate assembly protein V YP_050703.1 2947363 R 218491 CDS YP_050704.1 50121537 2884814 complement(2947941..2948579) 1 NC_004547.2 Similar to Bacteriophage P2 tail completion protein s S SWALL:VPS_BPP2 (SWALL:P36934) (150 aa) fasta scores: E(): 0.017, 24.02% id in 204 aa and to Bacteriophage phi CTX orf14 SWALL:Q9ZXL2 (EMBL:AB008550) (156 aa) fasta scores: E(): 1.7e-07, 32.02% id in 203 aa; phage tail protein S 2948579 2884814 ECA2613 Pectobacterium atrosepticum SCRI1043 phage tail protein S YP_050704.1 2947941 R 218491 CDS YP_050705.1 50121538 2884815 complement(2948572..2949024) 1 NC_004547.2 Similar to Bacteriophage P2 tail completion protein R SWALL:VPR_BPP2 (SWALL:P36933) (155 aa) fasta scores: E(): 9.1e-12, 37.31% id in 134 aa, and to Salmonella typhi phage tail protein sty3685 SWALL:Q8Z348 (EMBL:AL627279) (143 aa) fasta scores: E(): 7.3e-12, 38.16% id in 131 aa; phage tail completion protein R 2949024 2884815 ECA2614 Pectobacterium atrosepticum SCRI1043 phage tail completion protein R YP_050705.1 2948572 R 218491 CDS YP_050706.1 50121539 2883010 complement(2949025..2949321) 1 NC_004547.2 Similar to Bacteriophage P2 LysC SWALL:Q8LTD0 (EMBL:AF063097) (96 aa) fasta scores: E(): 8.4e-10, 40.69% id in 86 aa; phage protein 2949321 2883010 ECA2614A Pectobacterium atrosepticum SCRI1043 phage protein YP_050706.1 2949025 R 218491 CDS YP_050707.1 50121540 2883011 complement(2949164..2949604) 1 NC_004547.2 Similar to Bacteriophage P2 protein LysB SWALL:LYSB_BPP2 (SWALL:P51770) (141 aa) fasta scores: E(): 0.023, 28.77% id in 139 aa, and to Salmonella typhi regulatory protein sty3684 SWALL:Q8Z349 (EMBL:AL627279) (142 aa) fasta scores: E(): 1.2e-16, 51.16% id in 129 aa; phage encoded host lysis, regulatory protein 2949604 2883011 ECA2615 Pectobacterium atrosepticum SCRI1043 phage encoded host lysis, regulatory protein YP_050707.1 2949164 R 218491 CDS YP_050708.1 50121541 2883012 complement(2949601..2950143) 1 NC_004547.2 Similar to Vibrio harveyi bacteriophage VHML Orf19 orf19 SWALL:AAN12317 (EMBL:AY133112) (185 aa) fasta scores: E(): 6.7e-25, 40.44% id in 178 aa, and to Salmonella typhi hypothetical protein Sty1889 SWALL:Q8Z6A5 (EMBL:AL627271) (180 aa) fasta scores: E(): 1e-48, 64.44% id in 180 aa; hypothetical protein 2950143 2883012 ECA2616 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050708.1 2949601 R 218491 CDS YP_050709.1 50121542 2884076 complement(2950159..2950467) 1 NC_004547.2 Similar to Bacteriophage P2 holin Y SWALL:HOLI_BPP2 (SWALL:P51773) (93 aa) fasta scores: E(): 3.2e-23, 78.02% id in 91 aa, and to Bacteriophage 186 orf24 SWALL:O80308 (EMBL:U32222) (98 aa) fasta scores: E(): 1.3e-23, 72.16% id in 97 aa; phage lysis protein Y, holin 2950467 2884076 ECA2617 Pectobacterium atrosepticum SCRI1043 phage lysis protein Y, holin YP_050709.1 2950159 R 218491 CDS YP_050710.1 50121543 2884077 complement(2950470..2950670) 1 NC_004547.2 Similar to Bacteriophage P2 tail protein Gpx SWALL:VPX_BPP2 (SWALL:P51772) (67 aa) fasta scores: E(): 2.8e-10, 54.54% id in 66 aa and Bacteriophage 186 orf23 SWALL:O80307 (EMBL:U32222) (67 aa) fasta scores: E(): 2.4e-10, 50% id in 66 aa; phage tail protein X 2950670 2884077 ECA2618 Pectobacterium atrosepticum SCRI1043 phage tail protein X YP_050710.1 2950470 R 218491 CDS YP_050711.1 50121544 2884078 complement(2950670..2951167) 1 NC_004547.2 Similar to Bacteriophage P2 head completion/stabilization protein L SWALL:VPL_BPP2 (SWALL:P25475) (169 aa) fasta scores: E(): 1.8e-13, 31.28% id in 163 aa and Bacteriophage 186 Q protein Q SWALL:O80306 (EMBL:U32222) (168 aa) fasta scores: E(): 9.4e-14, 33.33% id in 144 aa; head completion/stabilization protein L 2951167 2884078 ECA2619 Pectobacterium atrosepticum SCRI1043 head completion/stabilization protein L YP_050711.1 2950670 R 218491 CDS YP_050712.1 50121545 2884065 complement(2951270..2952163) 1 NC_004547.2 Similar to Bacteriophage P2 terminase, endonuclease subunit M SWALL:VPM_BPP2 (SWALL:P25476) (247 aa) fasta scores: E(): 5.6e-20, 36.36% id in 220 aa and Bacteriophage 299 small terminase subunit M SWALL:Q94MK1 (EMBL:AJ298566) (247 aa) fasta scores: E(): 4.3e-20, 36.36% id in 220 aa; phage terminase, endonuclease small subunit M 2952163 2884065 ECA2620 Pectobacterium atrosepticum SCRI1043 phage terminase, endonuclease small subunit M YP_050712.1 2951270 R 218491 CDS YP_050713.1 50121546 2884066 complement(2952215..2953264) 1 NC_004547.2 Similar to Bacteriophage P2 major capsid protein precursor N SWALL:VPN_BPP2 (SWALL:P25477) (357 aa) fasta scores: E(): 6.7e-48, 40.69% id in 344 aa; major phage capsid protein N 2953264 2884066 ECA2621 Pectobacterium atrosepticum SCRI1043 major phage capsid protein N YP_050713.1 2952215 R 218491 CDS YP_050714.1 50121547 2884067 complement(2953289..2954122) 1 NC_004547.2 Similar to Bacteriophage P2 presumed capsid scaffolding protein O SWALL:VPO_BPP2 (SWALL:P25478) (284 aa) fasta scores: E(): 7.4e-21, 34.16% id in 281 aa; capsid scaffolding protein O 2954122 2884067 ECA2622 Pectobacterium atrosepticum SCRI1043 capsid scaffolding protein O YP_050714.1 2953289 R 218491 CDS YP_050715.1 50121548 2884068 2954281..2956002 1 NC_004547.2 Similar to Bacteriophage P2 terminase, ATPase subunit P SWALL:VPP_BPP2 (SWALL:P25479) (590 aa) fasta scores: E(): 8e-79, 45.26% id in 581 aa, and to Bacteriophage phi CTX pseudomonas aeruginosa phage phi ctx SWALL:Q9ZXM5 (EMBL:AB008550) (594 aa) fasta scores: E(): 1.7e-79, 45.81% id in 585 aa; phage terminase, ATPase P 2956002 2884068 ECA2623 Pectobacterium atrosepticum SCRI1043 phage terminase, ATPase P YP_050715.1 2954281 D 218491 CDS YP_050716.1 50121549 2884057 2956004..2957050 1 NC_004547.2 Similar to Bacteriophage P2 presumed portal vertex protein Q SWALL:VPQ_BPP2 (SWALL:P25480) (344 aa) fasta scores: E(): 3.8e-60, 44.89% id in 343 aa and Bacteriophage 186 capsid portal protein W SWALL:Q37851 (EMBL:U32222) (340 aa) fasta scores: E(): 1e-61, 46.11% id in 347 aa; phage capsid portal protein Q 2957050 2884057 ECA2624 Pectobacterium atrosepticum SCRI1043 phage capsid portal protein Q YP_050716.1 2956004 D 218491 CDS YP_050717.1 50121550 2884058 complement(2957426..2958115) 1 NC_004547.2 Similar to Bacteriophage PSA methylase Met SWALL:Q8W5X3 (EMBL:AJ312240) (270 aa) fasta scores: E(): 1.3e-07, 35.08% id in 114 aa, and to uncultured bacterium Upf31.0 protein upf31.0 SWALL:Q8RSH9 (EMBL:AJ431260) (224 aa) fasta scores: E(): 2e-22, 45.88% id in 231 aa; phage DNA methylase 2958115 2884058 ECA2625 Pectobacterium atrosepticum SCRI1043 phage DNA methylase YP_050717.1 2957426 R 218491 CDS YP_050718.1 50121551 2884059 complement(2958118..2958444) 1 NC_004547.2 Similar to the N-terminal regions of many including Heliobacillus mobilis ATP-dependent clp protease ATP-binding subunit clpx SWALL:AAN87458 (EMBL:AY142854) (420 aa) fasta scores: E(): 0.2, 46.15% id in 39 aa, and to Brucella abortus ClpX SWALL:Q9L7X5 (EMBL:AF218420) (423 aa) fasta scores: E(): 0.28, 42% id in 50 aa; phage-like protein 2958444 2884059 ECA2626 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_050718.1 2958118 R 218491 CDS YP_050719.1 50121552 2884060 complement(2958537..2961047) 1 NC_004547.2 Similar to Bacteriophage P2 replication gene A protein A SWALL:VPA_BPP2 (SWALL:Q06419) (761 aa) fasta scores: E(): 4e-50, 32.96% id in 731 aa, and to Escherichia coli O6 replication protein for prophage c0942 SWALL:AAN79415 (EMBL:AE016758) (804 aa) fasta scores: E(): 2.1e-91, 37.13% id in 797 aa; phage replication protein A 2961047 2884060 ECA2627 Pectobacterium atrosepticum SCRI1043 phage replication protein A YP_050719.1 2958537 R 218491 CDS YP_050720.1 50121553 2884043 complement(2961047..2962075) 1 NC_004547.2 Similar to Bacteriophage 186 hypothetical gp84 SWALL:CP84_BP186 (SWALL:P41062) (334 aa) fasta scores: E(): 1.7e-98, 69.69% id in 330 aa; phage protein 2962075 2884043 ECA2628 Pectobacterium atrosepticum SCRI1043 phage protein YP_050720.1 2961047 R 218491 CDS YP_050721.1 50121554 2884044 complement(2962068..2962916) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 DNA adenine methylase Dam or b3387 or z4740 or ecs4229 SWALL:DMA_ECOLI (SWALL:P00475) (278 aa) fasta scores: E(): 1e-47, 47.68% id in 281 aa; phage DNA adenine methylase 2962916 2884044 ECA2629 Pectobacterium atrosepticum SCRI1043 phage DNA adenine methylase YP_050721.1 2962068 R 218491 CDS YP_050722.1 50121555 2883859 complement(2962913..2963812) 1 NC_004547.2 Similar to Salmonella typhimurium phage ST64B Sb30 SWALL:AAL25908 (EMBL:AY055382) (189 aa) fasta scores: E(): 1e-30, 50% id in 186 aa, and in parts to many other Bacteriophage exodeoxyribonuclease. e.g. Bacteriophage T4 DexA SWALL:EXOD_BPT4 (SWALL:P04536) (227 aa) fasta scores: E(): 0.00055, 26.19% id in 210 aa and to the C-terminal region of Escherichia coli O157:H7 exonuclease VIII, ds DNA exonuclease, 5'--> 3' specific encoded by prophage CP-933o exoo or z2037 or ecs1759 SWALL:Q8X287 (EMBL:AE005343) (823 aa) fasta scores: E(): 1.2e-27, 44.44% id in 189 aa; hypothetical protein 2963812 2883859 ECA2630 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050722.1 2962913 R 218491 CDS YP_050723.1 50121556 2883860 complement(2963809..2964042) 1 NC_004547.2 Similar to Bacteriophage 186 hypothetical gp79 SWALL:CP79_BP186 (SWALL:P21682) (77 aa) fasta scores: E(): 0.00013, 40.62% id in 64 aa, and to Salmonella typhimurium fels-2 prophage: similar to protein in phage 186 stm2732 SWALL:Q8ZMS1 (EMBL:AE008824) (77 aa) fasta scores: E(): 0.0014, 35.52% id in 76 aa; hypothetical protein 2964042 2883860 ECA2631 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050723.1 2963809 R 218491 CDS YP_050724.1 50121557 2883861 complement(2964113..2964448) 1 NC_004547.2 Similar to Salmonella typhimurium fels-2 prophage: similar to e. coli retron ec67 stm2733 SWALL:Q8ZMS0 (EMBL:AE008824) (113 aa) fasta scores: E(): 4e-17, 54.05% id in 111 aa, and to Salmonella typhi hypothetical protein Sty3664 SWALL:Q8Z369 (EMBL:AL627279) (113 aa) fasta scores: E(): 6.4e-17, 54.05% id in 111 aa; hypothetical protein 2964448 2883861 ECA2632 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050724.1 2964113 R 218491 CDS YP_050725.1 50121558 2883862 complement(2964529..2964654) 1 NC_004547.2 Similar to Bacteriophage 186 host filamentation protein Fil SWALL:VFIL_BP186 (SWALL:P15236) (75 aa) fasta scores: E(): 5.7, 34.28% id in 35 aa, and to Salmonella typhimurium hypothetical protein Stm2735 stm2735 SWALL:Q8ZMR8 (EMBL:AE008824) (77 aa) fasta scores: E(): 1.7, 40% id in 30 aa; hypothetical protein 2964654 2883862 ECA2633 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050725.1 2964529 R 218491 CDS YP_050726.1 50121559 2883802 complement(2964651..2964851) 1 NC_004547.2 no significant database matches; hypothetical protein 2964851 2883802 ECA2634 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050726.1 2964651 R 218491 CDS YP_050727.1 50121560 2883803 complement(2964848..2965210) 1 NC_004547.2 Similar to Bacteriophage P2 regulatory protein Cox SWALL:VCOX_BPP2 (SWALL:P07695) (91 aa) fasta scores: E(): 0.0011, 33.33% id in 81 aa, and to Bacteriophage P2 Cox protein Cox SWALL:Q94MG1 (EMBL:AJ306907) (91 aa) fasta scores: E(): 0.0034, 32.09% id in 81 aa; phage regulatory protein 2965210 2883803 ECA2635 Pectobacterium atrosepticum SCRI1043 phage regulatory protein YP_050727.1 2964848 R 218491 CDS YP_050728.1 50121561 2883804 2965319..2965618 1 NC_004547.2 Similar to Bacteriophage P2 repressor protein C SWALL:RPC_BPP2 (SWALL:P04132) (99 aa) fasta scores: E(): 3.7e-15, 48.48% id in 99 aa; phage repressor protein C 2965618 2883804 ECA2636 Pectobacterium atrosepticum SCRI1043 phage repressor protein C YP_050728.1 2965319 D 218491 CDS YP_050729.1 50121562 2883687 2965685..2966671 1 NC_004547.2 Similar to Bacteriophage P2 integrase Int SWALL:VINT_BPP2 (SWALL:P36932) (337 aa) fasta scores: E(): 1.2e-68, 54.29% id in 326 aa; phage integrase 2966671 2883687 ECA2637 Pectobacterium atrosepticum SCRI1043 phage integrase YP_050729.1 2965685 D 218491 CDS YP_050730.1 50121563 2883688 complement(2967603..2969171) 1 NC_004547.2 Similar to Bacillus halodurans hydantoinase bh1884 SWALL:Q9KBP1 (EMBL:AP001513) (533 aa) fasta scores: E(): 2.5e-93, 50.09% id in 519 aa, and to Enterococcus faecalis hydantoinase/oxoprolinase ef3275 SWALL:AAO82942 (EMBL:AE016957) (517 aa) fasta scores: E(): 7.4e-90, 48.55% id in 519 aa; hydantoinase 2969171 2883688 ECA2639 Pectobacterium atrosepticum SCRI1043 hydantoinase YP_050730.1 2967603 R 218491 CDS YP_050731.1 50121564 2883689 complement(2969182..2970291) 1 NC_004547.2 Similar to Bacillus halodurans hypothetical protein Bh1883 SWALL:Q9KBP2 (EMBL:AP001513) (365 aa) fasta scores: E(): 7.6e-68, 49.45% id in 364 aa, and to Listeria innocua hypothetical protein Lin0474 SWALL:Q92EI5 (EMBL:AL596165) (366 aa) fasta scores: E(): 2e-64, 46.32% id in 367 aa; hypothetical protein 2970291 2883689 ECA2640 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050731.1 2969182 R 218491 CDS YP_050732.1 50121565 2883506 complement(2970344..2971648) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 cytosine permease CodB or b0336 or c0455 SWALL:CODB_ECOLI (SWALL:P25525) (419 aa) fasta scores: E(): 2.4e-20, 28% id in 350 aa, and to Bacillus halodurans cytosine permease bh1882 SWALL:Q9KBP3 (EMBL:AP001513) (445 aa) fasta scores: E(): 1.4e-50, 36.59% id in 429 aa; permease 2971648 2883506 ECA2641 Pectobacterium atrosepticum SCRI1043 permease YP_050732.1 2970344 R 218491 CDS YP_050733.1 50121566 2883507 2971922..2972863 1 NC_004547.2 Similar to Pseudomonas putida transcriptional regulator, LysR family pp4522 SWALL:AAN70096 (EMBL:AE016791) (297 aa) fasta scores: E(): 5.6e-24, 29.64% id in 280 aa, and to Rhizobium loti transcriptional regulator mlr6990 SWALL:Q987M7 (EMBL:AP003010) (299 aa) fasta scores: E(): 4.7e-18, 30.45% id in 266 aa; LysR family transcriptional regulator 2972863 2883507 ECA2642 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_050733.1 2971922 D 218491 CDS YP_050734.1 50121567 2883508 complement(2972849..2974003) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo1380 SWALL:Q8ZGC3 (EMBL:AJ414148) (382 aa) fasta scores: E(): 1.3e-102, 70.23% id in 383 aa, and to Salmonella typhimurium mfs family transport protein ycad or stm0968 SWALL:Q8ZQD2 (EMBL:AE008741) (382 aa) fasta scores: E(): 1e-95, 64.92% id in 382 aa; MFS family transporter protein 2974003 2883508 ECA2643 Pectobacterium atrosepticum SCRI1043 MFS family transporter protein YP_050734.1 2972849 R 218491 CDS YP_050735.1 50121568 2884399 complement(2974318..2975613) 1 NC_004547.2 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 2975613 serS 2884399 serS Pectobacterium atrosepticum SCRI1043 seryl-tRNA synthetase YP_050735.1 2974318 R 218491 CDS YP_050736.1 50121569 2883449 complement(2975717..2977060) 1 NC_004547.2 Similar to Yersinia pestis ATPase protein ypo1378 or y2797 SWALL:Q8ZGC5 (EMBL:AJ414148) (447 aa) fasta scores: E(): 4.1e-143, 89.48% id in 447 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein ycaj or b0892 or c1029 or z1238 or ecs0977 SWALL:YCAJ_ECOLI (SWALL:P45526) (447 aa) fasta scores: E(): 3.4e-139, 87.47% id in 447 aa; recombination factor protein RarA 2977060 2883449 ECA2645 Pectobacterium atrosepticum SCRI1043 recombination factor protein RarA YP_050736.1 2975717 R 218491 CDS YP_050737.1 50121570 2883041 complement(2977068..2977679) 1 NC_004547.2 participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 2977679 lolA 2883041 lolA Pectobacterium atrosepticum SCRI1043 outer-membrane lipoprotein carrier protein YP_050737.1 2977068 R 218491 CDS YP_050738.1 50121571 2883713 complement(2977892..2981302) 1 NC_004547.2 Similar to Escherichia coli cell division protein FtsK or b0890 SWALL:FTSK_ECOLI (SWALL:P46889) (1329 aa) fasta scores: E(): 3.8e-163, 53.6% id in 1347 aa; cell division protein 2981302 ftsK 2883713 ftsK Pectobacterium atrosepticum SCRI1043 cell division protein YP_050738.1 2977892 R 218491 CDS YP_050739.1 50121572 2882688 complement(2981417..2981911) 1 NC_004547.2 mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system; leucine-responsive transcriptional regulator 2981911 lrp 2882688 lrp Pectobacterium atrosepticum SCRI1043 leucine-responsive transcriptional regulator YP_050739.1 2981417 R 218491 CDS YP_050740.1 50121573 2883450 2982496..2983455 1 NC_004547.2 thioredoxin reductase 2983455 2883450 ECA2649 Pectobacterium atrosepticum SCRI1043 thioredoxin reductase YP_050740.1 2982496 D 218491 CDS YP_050741.1 50121574 2883042 2983684..2985450 1 NC_004547.2 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane protein/ATP-binding protein 2985450 cydD 2883042 cydD Pectobacterium atrosepticum SCRI1043 cysteine/glutathione ABC transporter membrane protein/ATP-binding protein YP_050741.1 2983684 D 218491 CDS YP_050742.2 161501873 2883052 2985468..2987189 1 NC_004547.2 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; cysteine/glutathione ABC transporter membrane protein/ATP-binding protein 2987189 cydC 2883052 cydC Pectobacterium atrosepticum SCRI1043 cysteine/glutathione ABC transporter membrane protein/ATP-binding protein YP_050742.2 2985468 D 218491 CDS YP_050743.1 50121576 2885272 2987214..2987927 1 NC_004547.2 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; leucyl/phenylalanyl-tRNA--protein transferase 2987927 aat 2885272 aat Pectobacterium atrosepticum SCRI1043 leucyl/phenylalanyl-tRNA--protein transferase YP_050743.1 2987214 D 218491 CDS YP_050744.1 50121577 2881757 2988043..2988261 1 NC_004547.2 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 2988261 infA 2881757 infA Pectobacterium atrosepticum SCRI1043 translation initiation factor IF-1 YP_050744.1 2988043 D 218491 CDS YP_050745.1 50121578 2883451 2988414..2989868 1 NC_004547.2 Similar to Rhizobium meliloti probable rhizopine catabolism regulatory protein MocR SWALL:MOCR_RHIME (SWALL:P49309) (493 aa) fasta scores: E(): 3.2e-48, 36.95% id in 433 aa, and to Escherichia coli O157:H7 z3973 protein z3973 or ecs3534 SWALL:Q8X922 (EMBL:AE005496) (444 aa) fasta scores: E(): 2.4e-54, 43.8% id in 452 aa; GntR family transcriptional regulator 2989868 2883451 ECA2654 Pectobacterium atrosepticum SCRI1043 GntR family transcriptional regulator YP_050745.1 2988414 D 218491 CDS YP_050746.1 50121579 2883452 complement(2989860..2990339) 1 NC_004547.2 Similar to Rhizobium loti hypothetical protein Mll1641 SWALL:Q98K47 (EMBL:AP002997) (152 aa) fasta scores: E(): 5.2e-25, 46.66% id in 150 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0269 SWALL:Q9I6M1 (EMBL:AE004465) (145 aa) fasta scores: E(): 4.4e-22, 42.36% id in 144 aa; hypothetical protein 2990339 2883452 ECA2655 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050746.1 2989860 R 218491 CDS YP_050747.1 50121580 2884962 complement(2990582..2992855) 1 NC_004547.2 ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates; ATP-dependent Clp protease ATP-binding subunit 2992855 clpA 2884962 clpA Pectobacterium atrosepticum SCRI1043 ATP-dependent Clp protease ATP-binding subunit YP_050747.1 2990582 R 218491 CDS YP_050748.1 50121581 2883408 complement(2992885..2993205) 1 NC_004547.2 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; ATP-dependent Clp protease adaptor protein ClpS 2993205 clpS 2883408 clpS Pectobacterium atrosepticum SCRI1043 ATP-dependent Clp protease adaptor protein ClpS YP_050748.1 2992885 R 218491 CDS YP_050749.1 50121582 2883409 complement(2993392..2993589) 1 NC_004547.2 hypothetical protein 2993589 2883409 ECA2658 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050749.1 2993392 R 218491 CDS YP_050750.1 50121583 2883917 2993630..2993851 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri cold shock-like protein CspD or CspH or b0880 or c1017 or z1117 or ecs0966 or sf0840 SWALL:CSPD_ECOLI (SWALL:P24245) (74 aa) fasta scores: E(): 9.7e-25, 87.32% id in 71 aa; cold shock-like protein 2993851 cspD 2883917 cspD Pectobacterium atrosepticum SCRI1043 cold shock-like protein YP_050750.1 2993630 D 218491 CDS YP_050751.1 50121584 2883410 complement(2993972..2995636) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo1362 ypo1362 SWALL:Q8ZGD9 (EMBL:AJ414148) (555 aa) fasta scores: E(): 1.1e-152, 66.3% id in 555 aa, and to Escherichia coli hypothetical protein ybjd or b0876 SWALL:YBJD_ECOLI (SWALL:P75828) (552 aa) fasta scores: E(): 1.3e-148, 67.14% id in 554 aa; hypothetical protein 2995636 2883410 ECA2660 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050751.1 2993972 R 218491 CDS YP_050752.1 50121585 2883411 2995945..2996844 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo1361 or y2818 SWALL:Q8ZGE0 (EMBL:AJ414147) (298 aa) fasta scores: E(): 4.1e-83, 74.16% id in 298 aa, and to Salmonella typhimurium inner membrane protein ybje or stm0938 SWALL:Q8ZQE7 (EMBL:AE008740) (299 aa) fasta scores: E(): 4.3e-75, 67.33% id in 300 aa; hypothetical protein 2996844 2883411 ECA2661 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050752.1 2995945 D 218491 CDS YP_050753.1 50121586 2883108 2997034..2998686 1 NC_004547.2 catalyzes the reduction of hydroxylamine to ammonia and water; hydroxylamine reductase 2998686 hcp 2883108 hcp Pectobacterium atrosepticum SCRI1043 hydroxylamine reductase YP_050753.1 2997034 D 218491 CDS YP_050754.1 50121587 2883109 2998826..2999851 1 NC_004547.2 Similar to Escherichia coli NADH oxidoreductase Hcr or b0872 SWALL:HCR_ECOLI (SWALL:P75824) (322 aa) fasta scores: E(): 1.3e-46, 61.14% id in 332 aa; HCP oxidoreductase 2999851 hcr 2883109 hcr Pectobacterium atrosepticum SCRI1043 HCP oxidoreductase YP_050754.1 2998826 D 218491 CDS YP_050755.1 50121588 2883242 2999998..3001434 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo1356 or y2824 SWALL:Q8ZGE5 (EMBL:AJ414147) (496 aa) fasta scores: E(): 1.8e-130, 66.52% id in 475 aa, and to Escherichia coli hypothetical protein ybjt or b0869 SWALL:YBJT_ECOLI (SWALL:P75822) (476 aa) fasta scores: E(): 1.6e-119, 60.08% id in 471 aa; hypothetical protein 3001434 2883242 ECA2664 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050755.1 2999998 D 218491 CDS YP_050756.1 50121589 2883243 complement(3001431..3002258) 1 NC_004547.2 Similar to Escherichia coli probable N-acetylmuramoyl-L-alanine amidase ybjr or b0867 SWALL:YBJR_ECOLI (SWALL:P75820) (276 aa) fasta scores: E(): 2.3e-62, 57.93% id in 271 aa, and to Salmonella typhi N-acetylmuramoyl-L-alanine amidase sty0927 SWALL:Q8Z834 (EMBL:AL627268) (276 aa) fasta scores: E(): 3.6e-60, 56.77% id in 273 aa; N-acetylmuramoyl-L-alanine amidase 3002258 2883243 ECA2665 Pectobacterium atrosepticum SCRI1043 N-acetylmuramoyl-L-alanine amidase YP_050756.1 3001431 R 218491 CDS YP_050757.1 50121590 2883235 complement(3002334..3002657) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi hypothetical protein ybjq or stm0930 or sty0926 SWALL:YBJQ_SALTY (SWALL:Q8XGV2) (107 aa) fasta scores: E(): 7.4e-32, 84.11% id in 107 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein ybjq or b0866 or c0999 or z1099 or ecs0952 SWALL:YBJQ_ECOLI (SWALL:P75819) (107 aa) fasta scores: E(): 8.3e-31, 82.24% id in 107 aa; hypothetical protein 3002657 2883235 ECA2666 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050757.1 3002334 R 218491 CDS YP_050758.1 50121591 2884115 3002815..3003543 1 NC_004547.2 With ArtMQJI transports arginine across the inner membrane; arginine transporter ATP-binding subunit 3003543 artP 2884115 artP Pectobacterium atrosepticum SCRI1043 arginine transporter ATP-binding subunit YP_050758.1 3002815 D 218491 CDS YP_050759.1 50121592 2884118 3003564..3004295 1 NC_004547.2 Similar to Escherichia coli arginine-binding periplasmic protein 1 precursor ArtI or b0863 SWALL:ARTI_ECOLI (SWALL:P30859) (243 aa) fasta scores: E(): 4e-67, 72.42% id in 243 aa; arginine-binding periplasmic protein 1 3004295 artI 2884118 artI Pectobacterium atrosepticum SCRI1043 arginine-binding periplasmic protein 1 YP_050759.1 3003564 D 218491 CDS YP_050760.1 50121593 2884110 3004307..3005023 1 NC_004547.2 with ArtPMJI transports arginine across the inner membrane; arginine transporter permease subunit ArtQ 3005023 artQ 2884110 artQ Pectobacterium atrosepticum SCRI1043 arginine transporter permease subunit ArtQ YP_050760.1 3004307 D 218491 CDS YP_050761.1 50121594 2884114 3005023..3005691 1 NC_004547.2 with ArtPQJI acts to transport arginine across the inner membrane; arginine transporter permease subunit ArtM 3005691 artM 2884114 artM Pectobacterium atrosepticum SCRI1043 arginine transporter permease subunit ArtM YP_050761.1 3005023 D 218491 CDS YP_050762.1 50121595 2884113 3005969..3006700 1 NC_004547.2 Similar to Escherichia coli arginine-binding periplasmic protein 2 precursor ArtJ or b0860 SWALL:ARTJ_ECOLI (SWALL:P30860) (243 aa) fasta scores: E(): 1.1e-71, 78.6% id in 243 aa; arginine-binding periplasmic protein 2 3006700 artJ 2884113 artJ Pectobacterium atrosepticum SCRI1043 arginine-binding periplasmic protein 2 YP_050762.1 3005969 D 218491 CDS YP_050763.1 50121596 2883236 complement(3007088..3008215) 1 NC_004547.2 RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA; 23S rRNA methyluridine methyltransferase 3008215 rumB 2883236 rumB Pectobacterium atrosepticum SCRI1043 23S rRNA methyluridine methyltransferase YP_050763.1 3007088 R 218491 CDS YP_050764.1 50121597 2883237 complement(3008342..3008794) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo1335 or y2846 SWALL:AAM86397 (EMBL:AJ414147) (154 aa) fasta scores: E(): 1e-23, 46.47% id in 142 aa, and to Salmonella typhimurium inner membrane protein ybjo or stm0881 SWALL:Q8ZQJ6 (EMBL:AE008737) (157 aa) fasta scores: E(): 1.5e-20, 42.56% id in 148 aa; hypothetical protein 3008794 2883237 ECA2673 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050764.1 3008342 R 218491 CDS YP_050765.1 50121598 2885666 complement(3009002..3009847) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 putrescine transport system permease protein PotI or b0857 or c0990 SWALL:POTI_ECOLI (SWALL:P31136) (281 aa) fasta scores: E(): 2.8e-90, 86.12% id in 281 aa; putrescine ABC transporter membrane protein 3009847 potI 2885666 potI Pectobacterium atrosepticum SCRI1043 putrescine ABC transporter membrane protein YP_050765.1 3009002 R 218491 CDS YP_050766.1 50121599 2885665 complement(3009844..3010809) 1 NC_004547.2 Similar to Escherichia coli putrescine transport system permease protein PotH or b0856 SWALL:POTH_ECOLI (SWALL:P31135) (317 aa) fasta scores: E(): 5.4e-105, 82.13% id in 319 aa; putrescine ABC transporter membrane protein 3010809 potH 2885665 potH Pectobacterium atrosepticum SCRI1043 putrescine ABC transporter membrane protein YP_050766.1 3009844 R 218491 CDS YP_050767.1 50121600 2883078 complement(3010824..3011957) 1 NC_004547.2 part of the PotFGHI ATP-dependent putrescine transporter; putrescine ABC transporter ATP-binding protein 3011957 potG 2883078 potG Pectobacterium atrosepticum SCRI1043 putrescine ABC transporter ATP-binding protein YP_050767.1 3010824 R 218491 CDS YP_050768.1 50121601 2883077 complement(3012229..3013338) 1 NC_004547.2 Similar to Escherichia coli putrescine-binding periplasmic protein precursor PotF or b0854 SWALL:POTF_ECOLI (SWALL:P31133) (370 aa) fasta scores: E(): 2.3e-122, 80.54% id in 370 aa; putrescine ABC transporter periplasmic-binding protein 3013338 potF 2883077 potF Pectobacterium atrosepticum SCRI1043 putrescine ABC transporter periplasmic-binding protein YP_050768.1 3012229 R 218491 CDS YP_050769.1 50121602 2883238 complement(3013707..3014189) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1330 or y2853 SWALL:Q8ZGG7 (EMBL:AJ414147) (161 aa) fasta scores: E(): 1.3e-47, 77.7% id in 157 aa, and to Salmonella typhimurium cytoplasmic protein ybjn or stm0876 SWALL:Q8ZQK1 (EMBL:AE008736) (158 aa) fasta scores: E(): 4.7e-41, 67.92% id in 159 aa; hypothetical protein 3014189 2883238 ECA2678 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050769.1 3013707 R 218491 CDS YP_050770.1 50121603 2884736 complement(3014433..3015344) 1 NC_004547.2 responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6; ribosomal protein S6 modification protein 3015344 rimK 2884736 rimK Pectobacterium atrosepticum SCRI1043 ribosomal protein S6 modification protein YP_050770.1 3014433 R 218491 CDS YP_050771.1 50121604 2882807 complement(3015361..3016080) 1 NC_004547.2 NADPH-dependent; oxygen-insensitive; catalyzes the reduction of nitroaromatic compounds; nitroreductase A 3016080 nfsA 2882807 nfsA Pectobacterium atrosepticum SCRI1043 nitroreductase A YP_050771.1 3015361 R 218491 CDS YP_050772.1 50121605 2884046 3016496..3016762 1 NC_004547.2 functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase; glutaredoxin 3016762 grxA 2884046 grxA Pectobacterium atrosepticum SCRI1043 glutaredoxin YP_050772.1 3016496 D 218491 CDS YP_050773.1 50121606 2883169 complement(3016833..3017204) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein ybjm or b0848 or z1075 or ecs0928 or sf0801 SWALL:AAN42434 (EMBL:AE000187) (125 aa) fasta scores: E(): 1.3e-18, 47.15% id in 123 aa, and to Salmonella typhimurium inner membrane protein ybjm or stm0871 SWALL:Q8ZQK3 (EMBL:AE008736) (125 aa) fasta scores: E(): 7.2e-18, 46.4% id in 125 aa; hypothetical protein 3017204 2883169 ECA2682 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050773.1 3016833 R 218491 CDS YP_050774.1 50121607 2883170 3017580..3019268 1 NC_004547.2 Similar to Yersinia pestis hypothetical membrane protein ypo1326 or y2857 SWALL:YD26_YERPE (SWALL:Q8ZGH1) (562 aa) fasta scores: E(): 6e-189, 89.14% id in 562 aa, and to Salmonella typhimurium hypothetical membrane protein ybjl or stm0870 SWALL:YBJL_SALTY (SWALL:Q8ZQK4) (561 aa) fasta scores: E(): 9.2e-188, 88.92% id in 560 aa; hypothetical protein 3019268 2883170 ECA2683 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050774.1 3017580 D 218491 CDS YP_050775.1 50121608 2883171 3019705..3020373 1 NC_004547.2 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; deoxyribose-phosphate aldolase 3020373 2883171 ECA2684 Pectobacterium atrosepticum SCRI1043 deoxyribose-phosphate aldolase YP_050775.1 3019705 D 218491 CDS YP_050776.1 50121609 2883629 3020405..3021178 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 deoxyribose operon repressor DeoR or NucR or b0840 or c0925 or z1067 or ecs0920 SWALL:DEOR_ECOLI (SWALL:P06217) (252 aa) fasta scores: E(): 6.5e-55, 54.72% id in 254 aa; DNA-binding transcriptional repressor DeoR 3021178 deoR 2883629 deoR Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional repressor DeoR YP_050776.1 3020405 D 218491 CDS YP_050777.1 50121610 2881623 complement(3021175..3022380) 1 NC_004547.2 Similar to Escherichia coli penicillin-binding protein 6 precursor DacC or b0839 SWALL:DACC_ECOLI (SWALL:P08506) (400 aa) fasta scores: E(): 3.5e-111, 71.6% id in 398 aa; penicillin-binding protein 6 3022380 dacC 2881623 dacC Pectobacterium atrosepticum SCRI1043 penicillin-binding protein 6 YP_050777.1 3021175 R 218491 CDS YP_050778.1 50121611 2883146 complement(3022666..3023325) 1 NC_004547.2 Similar to Salmonella enterica subsp. enterica serovar Typhi Ty2 ABC transporter integral membrane protein sfbc or t2348 SWALL:AAO69940 (EMBL:AE016842) (219 aa) fasta scores: E(): 2.6e-61, 81.65% id in 218 aa, and to Salmonella enteritidis integral membrane protein sfbC SWALL:Q9S4Y9 (EMBL:AF102556) (202 aa) fasta scores: E(): 1.6e-57, 83.08% id in 201 aa; ABC transporter 3023325 2883146 ECA2687 Pectobacterium atrosepticum SCRI1043 ABC transporter YP_050778.1 3022666 R 218491 CDS YP_050779.1 50121612 2883147 complement(3023318..3024334) 1 NC_004547.2 Similar to Salmonella enterica subsp. enterica serovar Typhi Ty2 ABC transporter ATP-binding protein sfbb or t2349 SWALL:AAO69941 (EMBL:AE016842) (338 aa) fasta scores: E(): 1.7e-84, 72.48% id in 338 aa, and to Oceanobacillus iheyensis ABC transporter ATP-binding protein ob2100 SWALL:Q8EPK1 (EMBL:AP004600) (341 aa) fasta scores: E(): 3.9e-59, 51.92% id in 337 aa; ABC transporter ATP-binding protein 3024334 2883147 ECA2688 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_050779.1 3023318 R 218491 CDS YP_050780.1 50121613 2883148 complement(3024416..3025261) 1 NC_004547.2 Similar to Salmonella typhi lipoprotein sfba or sty0558 SWALL:Q8Z8R6 (EMBL:AL627267) (276 aa) fasta scores: E(): 2.7e-73, 74.36% id in 277 aa, and to Oceanobacillus iheyensis lipoprotein ob2098 SWALL:BAC14054 (EMBL:AP004600) (274 aa) fasta scores: E(): 9.9e-41, 46.93% id in 277 aa; lipoprotein 3025261 2883148 ECA2689 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_050780.1 3024416 R 218491 CDS YP_050781.1 50121614 2883123 3025403..3026020 1 NC_004547.2 Similar to Yersinia pestis glutathione S-transferase-family protein ypo1314 SWALL:Q8ZGI3 (EMBL:AJ414147) (206 aa) fasta scores: E(): 1.4e-53, 62.62% id in 206 aa, and to Salmonella typhimurium glutathione S-transferase ylij or stm0862 SWALL:Q8ZQL2 (EMBL:AE008736) (208 aa) fasta scores: E(): 1.6e-47, 56.73% id in 208 aa; glutathione S-transferase 3026020 2883123 ECA2690 Pectobacterium atrosepticum SCRI1043 glutathione S-transferase YP_050781.1 3025403 D 218491 CDS YP_050782.1 50121615 2883124 complement(3026053..3027219) 1 NC_004547.2 Similar to Escherichia coli hypothetical protein ylii precursor ylii or b0837 SWALL:YLII_ECOLI (SWALL:P75804) (371 aa) fasta scores: E(): 4.8e-98, 65.19% id in 362 aa, and to Pseudomonas putida conserved hypothetical protein pp2198 SWALL:AAN67811 (EMBL:AE016782) (381 aa) fasta scores: E(): 2.7e-96, 66.13% id in 375 aa; hypothetical protein 3027219 2883124 ECA2691 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050782.1 3026053 R 218491 CDS YP_050783.1 50121616 2883125 complement(3027383..3028801) 1 NC_004547.2 Similar to Agrobacterium tumefaciens amine oxidase, flavin-containing atu1977 or agr_c_3599 SWALL:Q8UDY9 (EMBL:AE009150) (457 aa) fasta scores: E(): 3.3e-25, 27.16% id in 438 aa, and to Rhizobium loti hypothetical protein Mll8087 SWALL:Q984A4 (EMBL:AP003013) (448 aa) fasta scores: E(): 4.9e-26, 29.45% id in 421 aa; flavin-containing amine oxidase 3028801 2883125 ECA2692 Pectobacterium atrosepticum SCRI1043 flavin-containing amine oxidase YP_050783.1 3027383 R 218491 CDS YP_050784.1 50121617 2882999 complement(3028798..3029253) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo3467 SWALL:Q8ZBE9 (EMBL:AJ414157) (147 aa) fasta scores: E(): 3.7e-20, 39.71% id in 141 aa, and to Salmonella typhimurium, and Salmonella typhi cytoplasmic protein yhbp or stm3270 or sty3453 SWALL:Q8XEW3 (EMBL:AE008850) (147 aa) fasta scores: E(): 4.1e-14, 28.96% id in 145 aa; hypothetical protein 3029253 2882999 ECA2693 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050784.1 3028798 R 218491 CDS YP_050785.1 50121618 2883000 complement(3029319..3031103) 1 NC_004547.2 Similar to Amycolatopsis mediterranei peptide synthetase BpsD SWALL:Q939Y2 (EMBL:Y16952) (581 aa) fasta scores: E(): 2e-44, 32.34% id in 575 aa, and to Myxococcus xanthus Ta1 SWALL:Q9Z5F4 (EMBL:AJ006977) (2393 aa) fasta scores: E(): 4e-51, 32.97% id in 552 aa; polyketide synthetase 3031103 2883000 ECA2694 Pectobacterium atrosepticum SCRI1043 polyketide synthetase YP_050785.1 3029319 R 218491 CDS YP_050786.1 50121619 2883001 complement(3031133..3032050) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 malonyl CoA-acyl carrier protein transacylase FabD or TfpA or b1092 or c1361 SWALL:FABD_ECOLI (SWALL:P25715) (308 aa) fasta scores: E(): 0.069, 20.96% id in 291 aa, and to Chlorobium tepidum malonyl coa-acyl carrier protein transacylase fabd or ct2115 SWALL:Q8KAP1 (EMBL:AE012960) (305 aa) fasta scores: E(): 0.0019, 22.22% id in 288 aa; malonyl CoA-acyl carrier protein transacylase 3032050 2883001 ECA2695 Pectobacterium atrosepticum SCRI1043 malonyl CoA-acyl carrier protein transacylase YP_050786.1 3031133 R 218491 CDS YP_050787.1 50121620 2885344 complement(3032047..3033456) 1 NC_004547.2 Similar to Pantoea agglomerans EhpG SWALL:AAN40896 (EMBL:AF451953) (311 aa) fasta scores: E(): 7.2e-36, 39.41% id in 274 aa, and to Streptomyces griseus Orf3 protein SWALL:Q9ZN74 (EMBL:AB022095) (456 aa) fasta scores: E(): 2.1e-22, 30.9% id in 453 aa; phenazine antibiotic biosynthesis protein 3033456 ehpG 2885344 ehpG Pectobacterium atrosepticum SCRI1043 phenazine antibiotic biosynthesis protein YP_050787.1 3032047 R 218491 CDS YP_050788.1 50121621 2885343 complement(3033456..3034517) 1 NC_004547.2 Similar to Pantoea agglomerans EhpF SWALL:AAN40895 (EMBL:AF451953) (366 aa) fasta scores: E(): 3.2e-61, 43.02% id in 344 aa, and to Streptomyces griseus orf2 protein SWALL:Q9ZN75 (EMBL:AB022095) (352 aa) fasta scores: E(): 8e-46, 39.88% id in 351 aa; phenazine antibiotic biosynthesis protein 3034517 ehpF 2885343 ehpF Pectobacterium atrosepticum SCRI1043 phenazine antibiotic biosynthesis protein YP_050788.1 3033456 R 218491 CDS YP_050789.1 50121622 2885342 complement(3034530..3035168) 1 NC_004547.2 Similar to Pseudomonas chlororaphis phenazine biosynthesis protein PhzD SWALL:PHZD_PSECL (SWALL:Q51521) (222 aa) fasta scores: E(): 1.1e-29, 38.02% id in 213 aa, and to Pantoea agglomerans EhpE SWALL:AAN40894 (EMBL:AF451953) (208 aa) fasta scores: E(): 1.8e-20, 34.95% id in 206 aa; phenazine antibiotic biosynthesis protein 3035168 ehpE 2885342 ehpE Pectobacterium atrosepticum SCRI1043 phenazine antibiotic biosynthesis protein YP_050789.1 3034530 R 218491 CDS YP_050790.1 50121623 2882596 complement(3035178..3036023) 1 NC_004547.2 Similar to Pseudomonas aeruginosa phenazine/pyocyanine biosynthesis protein PhzF SWALL:PHZF_PSEAE (SWALL:O69754) (278 aa) fasta scores: E(): 2.2e-56, 54.96% id in 282 aa, and to Pantoea agglomerans EhpD SWALL:AAN40893 (EMBL:AF451953) (287 aa) fasta scores: E(): 8.8e-40, 46.12% id in 258 aa; phenazine antibiotic biosynthesis protein 3036023 ehpD 2882596 ehpD Pectobacterium atrosepticum SCRI1043 phenazine antibiotic biosynthesis protein YP_050790.1 3035178 R 218491 CDS YP_050791.1 50121624 2883002 complement(3036002..3036352) 1 NC_004547.2 hypothetical protein 3036352 2883002 ECA2700 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050791.1 3036002 R 218491 CDS YP_050792.1 50121625 2882595 complement(3036349..3038226) 1 NC_004547.2 Similar to Pseudomonas aeruginosa PhzE and pa4214 SWALL:O33410 (EMBL:AF005404) (627 aa) fasta scores: E(): 1.2e-105, 45.65% id in 622 aa, and to Pantoea agglomerans EhpC SWALL:AAN40892 (EMBL:AF451953) (634 aa) fasta scores: E(): 6.8e-55, 37.82% id in 624 aa; phenazine antibiotic biosynthesis protein 3038226 ehpC 2882595 ehpC Pectobacterium atrosepticum SCRI1043 phenazine antibiotic biosynthesis protein YP_050792.1 3036349 R 218491 CDS YP_050793.1 50121626 2882594 complement(3038223..3038843) 1 NC_004547.2 Similar to Pseudomonas chlororaphis PhzD SWALL:Q9R9G4 (EMBL:AF195615) (207 aa) fasta scores: E(): 4.5e-38, 47.29% id in 203 aa, and to Pantoea agglomerans EhpB SWALL:AAN40891 (EMBL:AF451953) (209 aa) fasta scores: E(): 1.9e-36, 46.73% id in 199 aa; phenazine antibiotic biosynthesis protein 3038843 ehpB 2882594 ehpB Pectobacterium atrosepticum SCRI1043 phenazine antibiotic biosynthesis protein YP_050793.1 3038223 R 218491 CDS YP_050794.1 50121627 2881723 complement(3038923..3039381) 1 NC_004547.2 Similar to Pseudomonas aeruginosa PhzB or pa4211 SWALL:O69753 (EMBL:AF005404) (162 aa) fasta scores: E(): 2.4e-41, 64.43% id in 149 aa, and to Pantoea agglomerans EhpA SWALL:AAN40890 (EMBL:AF451953) (158 aa) fasta scores: E(): 8.9e-37, 58.5% id in 147 aa; phenazine antibiotic biosynthesis protein 3039381 ehpA 2881723 ehpA Pectobacterium atrosepticum SCRI1043 phenazine antibiotic biosynthesis protein YP_050794.1 3038923 R 218491 CDS YP_050795.1 50121628 2882992 complement(3039428..3040207) 1 NC_004547.2 Similar to Streptomyces aureofaciens oxygenase-like protein aur2G SWALL:Q93M01 (EMBL:AY033994) (285 aa) fasta scores: E(): 1.2e-38, 45.56% id in 259 aa, and to Rhizobium loti oxidoreductase of short-chain mlr1595 SWALL:Q98K81 (EMBL:AP002997) (279 aa) fasta scores: E(): 2.9e-44, 49.8% id in 255 aa; short chain dehydrogenase 3040207 2882992 ECA2704 Pectobacterium atrosepticum SCRI1043 short chain dehydrogenase YP_050795.1 3039428 R 218491 CDS YP_050796.1 50121629 2885206 complement(3040365..3040751) 1 NC_004547.2 Similar to Pantoea agglomerans EhpR SWALL:AAN40889 (EMBL:AF451953) (129 aa) fasta scores: E(): 1.9e-06, 31.96% id in 122 aa, and to Rhizobium loti hypothetical protein Mll3207 SWALL:Q98GR5 (EMBL:AP003001) (131 aa) fasta scores: E(): 1.3e-16, 45.29% id in 117 aa; phenazine antibiotic biosynthesis protein 3040751 ehpR 2885206 ehpR Pectobacterium atrosepticum SCRI1043 phenazine antibiotic biosynthesis protein YP_050796.1 3040365 R 218491 CDS YP_050797.1 50121630 2882993 3041393..3041695 1 NC_004547.2 hypothetical protein 3041695 2882993 ECA2706 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050797.1 3041393 D 218491 CDS YP_050798.1 50121631 2882994 3041710..3041943 1 NC_004547.2 hypothetical protein 3041943 2882994 ECA2707 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050798.1 3041710 D 218491 CDS YP_050799.1 50121632 2882995 3042056..3043384 1 NC_004547.2 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; ribosomal protein S12 methylthiotransferase 3043384 rimO 2882995 rimO Pectobacterium atrosepticum SCRI1043 ribosomal protein S12 methylthiotransferase YP_050799.1 3042056 D 218491 CDS YP_050800.1 50121633 2884438 3043567..3044349 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri sana protein SanA or b2144 or c2677 or z3399 or ecs3036 or sf2229 SWALL:SANA_ECOLI (SWALL:P33017) (239 aa) fasta scores: E(): 4.2e-73, 80.75% id in 239 aa; hypothetical protein 3044349 sanA 2884438 sanA Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050800.1 3043567 D 218491 CDS YP_050801.1 50121634 2882990 complement(3044359..3045534) 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo1506 SWALL:Q8ZG14 (EMBL:AJ414148) (388 aa) fasta scores: E(): 3.3e-95, 61.62% id in 370 aa, and to Escherichia coli hypothetical protein yeib or b2152 SWALL:YEIB_ECOLI (SWALL:P25747) (385 aa) fasta scores: E(): 5.9e-88, 59.45% id in 370 aa; hypothetical protein 3045534 2882990 ECA2710 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050801.1 3044359 R 218491 CDS YP_050802.1 50121635 2885248 complement(3045672..3046334) 1 NC_004547.2 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 3046334 folE 2885248 folE Pectobacterium atrosepticum SCRI1043 GTP cyclohydrolase I YP_050802.1 3045672 R 218491 CDS YP_050803.1 50121636 2882991 complement(3046666..3048348) 1 NC_004547.2 Similar to Salmonella typhimurium methyl-accepting chemotaxis protein stm3152 SWALL:Q8ZM14 (EMBL:AE008845) (547 aa) fasta scores: E(): 2.1e-79, 47.61% id in 565 aa, and to Yersinia pestis methyl-accepting chemotaxis protein CheD or ypo1675 or Tsr or y1837 SWALL:Q8ZFM2 (EMBL:AJ414149) (557 aa) fasta scores: E(): 1.5e-65, 44.12% id in 562 aa; methyl-accepting chemotaxis protein 3048348 2882991 ECA2712 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_050803.1 3046666 R 218491 CDS YP_050804.1 50121637 2885570 3049052..3049924 1 NC_004547.2 Similar to Yersinia pestis LysR-family transcriptional regulatory protein ypo1503 or y2666 SWALL:AAM86219 (EMBL:AJ414148) (289 aa) fasta scores: E(): 1.1e-90, 79.93% id in 284 aa, and to Pseudomonas putida transcriptional regulator, LysR family pp3152 SWALL:AAN68760 (EMBL:AE016785) (288 aa) fasta scores: E(): 1.2e-58, 53.12% id in 288 aa; LysR family transcriptional regulator 3049924 2885570 ECA2713 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_050804.1 3049052 D 218491 CDS YP_050805.1 50121638 2883902 3050037..3051158 1 NC_004547.2 Similar to Escherichia coli alcohol dehydrogenase class III AdhC or b0356 SWALL:ADH3_ECOLI (SWALL:P25437) (369 aa) fasta scores: E(): 1.7e-102, 70.46% id in 369 aa, and to Yersinia pestis alcohol dehydrogenase class III, formaldehyde dehydrogenase adhc or y2667 SWALL:AAM86220 (EMBL:AE013869) (379 aa) fasta scores: E(): 2.3e-130, 91.93% id in 372 aa; alcohol dehydrogenase 3051158 adhC 2883902 adhC Pectobacterium atrosepticum SCRI1043 alcohol dehydrogenase YP_050805.1 3050037 D 218491 CDS YP_050806.1 50121639 2885571 3051198..3052058 1 NC_004547.2 Similar to Yersinia pestis esterase ypo1501 or y2668 SWALL:Q8ZG19 (EMBL:AJ414148) (280 aa) fasta scores: E(): 5.2e-93, 78.77% id in 278 aa, and to Salmonella typhi esterase sty2428 SWALL:Q8Z5A1 (EMBL:AL627273) (285 aa) fasta scores: E(): 1.3e-88, 74.55% id in 279 aa; esterase 3052058 2885571 ECA2715 Pectobacterium atrosepticum SCRI1043 esterase YP_050806.1 3051198 D 218491 CDS YP_050807.1 50121640 2885572 3052224..3052868 1 NC_004547.2 Similar to Schizosaccharomyces pombe glutathione S-transferase III gst3 or spac688.04C SWALL:GTH3_SCHPO (SWALL:Q9P6M1) (242 aa) fasta scores: E(): 1.8e-23, 38.57% id in 210 aa, and to Xanthomonas axonopodis glutathione S-transferase GstA or xac2394 SWALL:Q8PJY3 (EMBL:AE011876) (232 aa) fasta scores: E(): 3.5e-41, 50.68% id in 219 aa; glutathione S-transferase 3052868 2885572 ECA2716 Pectobacterium atrosepticum SCRI1043 glutathione S-transferase YP_050807.1 3052224 D 218491 CDS YP_050808.1 50121641 2885573 3053229..3053441 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2434 or y1902 SWALL:Q8ZDW4 (EMBL:AJ414152) (70 aa) fasta scores: E(): 8.1e-05, 34.37% id in 64 aa, and to Caulobacter crescentus hypothetical protein Cc0128 SWALL:Q9ABU2 (EMBL:AE005687) (66 aa) fasta scores: E(): 0.0025, 31.25% id in 64 aa; hypothetical protein 3053441 2885573 ECA2717 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050808.1 3053229 D 218491 CDS YP_050809.1 50121642 2882891 complement(3053503..3054591) 1 NC_004547.2 member of the iron-containing alcohol dehydrogenase family; unknown function; hypothetical protein 3054591 2882891 ECA2718 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050809.1 3053503 R 218491 CDS YP_050810.1 50121643 2882892 3054844..3056355 1 NC_004547.2 Similar to Agrobacterium tumefaciens ABC transporter, nucleotide binding/ATPase protein rbsa or atu2819 or agr_c_5112 SWALL:Q8UBN2 (EMBL:AE009229) (521 aa) fasta scores: E(): 7.1e-69, 41.66% id in 492 aa, and to Yersinia pestis sugar transport ATP-binding protein MglA or ypo0958 or y3345 SWALL:AAM86895 (EMBL:AJ414145) (499 aa) fasta scores: E(): 2.4e-67, 41.21% id in 495 aa; ABC transporter ATP-binding protein 3056355 2882892 ECA2719 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_050810.1 3054844 D 218491 CDS YP_050811.1 50121644 2882893 3056352..3057347 1 NC_004547.2 Similar to Yersinia pestis ribose transport system, permease protein ypo1553 or y2615 SWALL:AAM86169 (EMBL:AJ414149) (331 aa) fasta scores: E(): 2.4e-101, 87.31% id in 331 aa, and to Agrobacterium tumefaciens ABC transporter, membrane spanning protein rbsc or atu4322 or agr_l_1078 SWALL:Q8U7X7 (EMBL:AE009360) (327 aa) fasta scores: E(): 1.8e-31, 34.45% id in 328 aa; ABC transporter permease 3057347 2882893 ECA2720 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_050811.1 3056352 D 218491 CDS YP_050812.1 50121645 2885420 complement(3057901..3058890) 1 NC_004547.2 Catalyzes the reduction of hydroxypyruvate to form D-glycerate, using NADH as an electron donor; glycerate dehydrogenase 3058890 hprA 2885420 hprA Pectobacterium atrosepticum SCRI1043 glycerate dehydrogenase YP_050812.1 3057901 R 218491 CDS YP_050813.1 50121646 2885508 complement(3059363..3061480) 1 NC_004547.2 Similar to Vibrio cholerae iron-regulated outer membrane virulence protein precursor IrgA or vc0475 SWALL:IRGA_VIBCH (SWALL:P27772) (652 aa) fasta scores: E(): 9.1e-29, 35.05% id in 716 aa, and to Escherichia coli exogenous ferric siderophore receptor R4 SWALL:O87518 (EMBL:AF081285) (669 aa) fasta scores: E(): 2e-148, 55.45% id in 678 aa, and to Campylobacter coli ferric receptor CfrA cfrA SWALL:O07651 (EMBL:U80812) (696 aa) fasta scores: E(): 2.3e-77, 37.83% id in 703 aa; exogenous ferric siderophore TonB-dependent receptor 3061480 2885508 ECA2722 Pectobacterium atrosepticum SCRI1043 exogenous ferric siderophore TonB-dependent receptor YP_050813.1 3059363 R 218491 CDS YP_050814.1 50121647 2882300 complement(3061821..3063296) 1 NC_004547.2 Similar to Escherichia coli lysine-specific permease LysP or CadR or b2156 SWALL:LYSP_ECOLI (SWALL:P25737) (488 aa) fasta scores: E(): 1.2e-162, 84.64% id in 482 aa; lysine transporter 3063296 lysP 2882300 lysP Pectobacterium atrosepticum SCRI1043 lysine transporter YP_050814.1 3061821 R 218491 CDS YP_050815.1 50121648 2884456 complement(3063432..3064304) 1 NC_004547.2 Similar to Yersinia enterocolitica RscR SWALL:Q93DC5 (EMBL:AF394928) (290 aa) fasta scores: E(): 4.4e-91, 78.62% id in 290 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical transcriptional regulator yeie or b2157 or c2692 or z3414 or ecs3049 SWALL:YEIE_ECOLI (SWALL:P32484) (293 aa) fasta scores: E(): 1.1e-90, 76.57% id in 286 aa; DNA-binding transcriptional regulator 3064304 rscR 2884456 rscR Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional regulator YP_050815.1 3063432 R 218491 CDS YP_050816.1 50121649 2885509 3064423..3065496 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo1307 SWALL:Q8ZGJ0 (EMBL:AJ414147) (362 aa) fasta scores: E(): 4.1e-76, 59.46% id in 338 aa, and to Salmonella typhi membrane protein sty2437 SWALL:Q8Z594 (EMBL:AL627273) (349 aa) fasta scores: E(): 2.6e-69, 57.69% id in 338 aa; hypothetical protein 3065496 2885509 ECA2725 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050816.1 3064423 D 218491 CDS YP_050817.1 50121650 2882806 3065575..3066420 1 NC_004547.2 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; endonuclease IV 3066420 nfo 2882806 nfo Pectobacterium atrosepticum SCRI1043 endonuclease IV YP_050817.1 3065575 D 218491 CDS YP_050818.1 50121651 2884873 complement(3066702..3068393) 1 NC_004547.2 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system fructose-specific transporter subunit IIBC 3068393 fruA 2884873 fruA Pectobacterium atrosepticum SCRI1043 PTS system fructose-specific transporter subunit IIBC YP_050818.1 3066702 R 218491 CDS YP_050819.1 50121652 2884525 complement(3068412..3069350) 1 NC_004547.2 converts fructose-1-phosphate and ATP to fructose-1,6-bisphosphate and ADP; highly specific for fructose-1-phopshate; similar to PfkB; forms homodimers; 1-phosphofructokinase 3069350 fruK 2884525 fruK Pectobacterium atrosepticum SCRI1043 1-phosphofructokinase YP_050819.1 3068412 R 218491 CDS YP_050820.1 50121653 2884874 complement(3069347..3070480) 1 NC_004547.2 phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIA is phosphorylated by phospho-HP which then transfers the phosphoryl group to the IIB componentr; bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein 3070480 fruB 2884874 fruB Pectobacterium atrosepticum SCRI1043 bifunctional PTS system fructose-specific transporter subunit IIA/HPr protein YP_050820.1 3069347 R 218491 CDS YP_050821.1 50121654 2884375 3070815..3071993 1 NC_004547.2 Similar to Erwinia chrysanthemi sugar efflux transporter A SotA SWALL:SOTA_ERWCH (SWALL:Q9S3K0) (393 aa) fasta scores: E(): 3.9e-125, 80.72% id in 389 aa, and to Escherichia coli sugar efflux transporter B SetB or b2170 SWALL:SETB_ECOLI (SWALL:P33026) (393 aa) fasta scores: E(): 2.7e-116, 71.97% id in 389 aa; sugar efflux transporter 3071993 sotA 2884375 sotA Pectobacterium atrosepticum SCRI1043 sugar efflux transporter YP_050821.1 3070815 D 218491 CDS YP_050822.1 50121655 2885510 complement(3072004..3072258) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1286 or y2898 SWALL:Q8ZGK5 (EMBL:AJ414147) (84 aa) fasta scores: E(): 7.1e-22, 66.66% id in 84 aa, and to Escherichia coli, and Escherichia coli O6 hypothetical protein yeiw or b2170.1 or c2707 SWALL:YEIW_ECOLI (SWALL:P58039) (84 aa) fasta scores: E(): 1.7e-20, 64.28% id in 84 aa; hypothetical protein 3072258 2885510 ECA2731 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050822.1 3072004 R 218491 CDS YP_050823.1 50121656 2882777 3072423..3072995 1 NC_004547.2 Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro, suggesting its involvement in the formation of the first peptide bond of a protein; elongation factor P 3072995 2882777 ECA2732 Pectobacterium atrosepticum SCRI1043 elongation factor P YP_050823.1 3072423 D 218491 CDS YP_050824.1 50121657 2882778 3073082..3074083 1 NC_004547.2 Similar to Yersinia pestis cobalamin synthesis protein ypo1277 or y2906 SWALL:AAM86457 (EMBL:AJ414147) (327 aa) fasta scores: E(): 9.2e-90, 70.6% id in 330 aa, and to Salmonella typhimurium, and Salmonella typhi cobalamin synthesis protein yeir or stm2212 or sty2448 SWALL:Q8XFI7 (EMBL:AE008799) (328 aa) fasta scores: E(): 9.7e-83, 66.26% id in 329 aa; hypothetical protein 3074083 2882778 ECA2733 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050824.1 3073082 D 218491 CDS YP_050825.1 50121658 2882779 3074117..3074818 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo1276 or y2907 SWALL:AAM86458 (EMBL:AJ414147) (233 aa) fasta scores: E(): 2.3e-66, 71.05% id in 228 aa, and to Salmonella typhimurium permease yeiu or stm2213 SWALL:Q8ZNK2 (EMBL:AE008799) (239 aa) fasta scores: E(): 1.3e-59, 66.22% id in 225 aa; membrane-bound phosphatase 3074818 2882779 ECA2734 Pectobacterium atrosepticum SCRI1043 membrane-bound phosphatase YP_050825.1 3074117 D 218491 CDS YP_050826.1 50121659 2884364 3075141..3075722 1 NC_004547.2 by similarity, Spr seems to have peptidase activity; involved in thermoresistance; outer membrane lipoprotein 3075722 spr 2884364 spr Pectobacterium atrosepticum SCRI1043 outer membrane lipoprotein YP_050826.1 3075141 D 218491 CDS YP_050827.1 50121660 2882291 3076165..3077973 1 NC_004547.2 Similar to Yersinia pestis substrate-binding transport protein ypo1273 or y2910 SWALL:Q8ZGL6 (EMBL:AJ414147) (602 aa) fasta scores: E(): 1.5e-180, 69.6% id in 602 aa, and to Salmonella typhi transport system periplasmic binding protein sty2452 SWALL:Q8Z585 (EMBL:AL627273) (601 aa) fasta scores: E(): 4.8e-162, 62.29% id in 602 aa; ABC transporter periplasmic-binding protein 3077973 2882291 ECA2736 Pectobacterium atrosepticum SCRI1043 ABC transporter periplasmic-binding protein YP_050827.1 3076165 D 218491 CDS YP_050828.1 50121661 2882292 3077983..3079080 1 NC_004547.2 Similar to Yersinia pestis ABC transporter integral membrane subunit ypo1272 or y2911 SWALL:AAM86462 (EMBL:AJ414147) (366 aa) fasta scores: E(): 6.5e-118, 83.92% id in 367 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical ABC transporter permease protein yejb yejb or b2178 or z3437 or ecs3070 SWALL:YEJB_ECOLI (SWALL:P33914) (364 aa) fasta scores: E(): 6.4e-113, 81.09% id in 365 aa; binding-protein-dependent transporter 3079080 2882292 ECA2737 Pectobacterium atrosepticum SCRI1043 binding-protein-dependent transporter YP_050828.1 3077983 D 218491 CDS YP_050829.1 50121662 2882293 3079077..3080102 1 NC_004547.2 Similar to Yersinia pestis ABC transporter integral membrane subunit ypo1271 or y2912 SWALL:AAM86463 (EMBL:AJ414147) (342 aa) fasta scores: E(): 3.5e-106, 76.83% id in 341 aa, and to Escherichia coli hypothetical ABC transporter permease protein yeje or b2179 SWALL:YEJE_ECOLI (SWALL:P33915) (341 aa) fasta scores: E(): 6.2e-105, 75.58% id in 340 aa; ABC transporter permease 3080102 2882293 ECA2738 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_050829.1 3079077 D 218491 CDS YP_050830.1 50121663 2882294 3080104..3081720 1 NC_004547.2 Similar to Yersinia pestis ABC transporter ATP-binding subunit ypo1270 SWALL:Q8ZGL9 (EMBL:AJ414147) (530 aa) fasta scores: E(): 1.2e-144, 74.85% id in 529 aa, and to Salmonella typhi ABC-transporter ATP-binding protein sty2455 SWALL:Q8Z583 (EMBL:AL627273) (529 aa) fasta scores: E(): 8.4e-139, 72.15% id in 528 aa; ABC transporter ATP-binding protein 3081720 2882294 ECA2739 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_050830.1 3080104 D 218491 CDS YP_050831.1 50121664 2885436 complement(3081761..3082105) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1269 or y2914 SWALL:AAM86465 (EMBL:AJ414147) (114 aa) fasta scores: E(): 5e-30, 63.15% id in 114 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri hypothetical protein yejg or b2181 or c2718 or sf2268 SWALL:YEJG_ECOLI (SWALL:P33917) (114 aa) fasta scores: E(): 1.4e-27, 62.28% id in 114 aa; hypothetical protein 3082105 2885436 ECA2740 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050831.1 3081761 R 218491 CDS YP_050832.1 50121665 2882549 complement(3082493..3083683) 1 NC_004547.2 Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance; bicyclomycin/multidrug efflux system 3083683 bcr 2882549 bcr Pectobacterium atrosepticum SCRI1043 bicyclomycin/multidrug efflux system YP_050832.1 3082493 R 218491 CDS YP_050833.1 50121666 2884442 complement(3083724..3084419) 1 NC_004547.2 catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA; 16S rRNA pseudouridylate synthase A 3084419 rsuA 2884442 rsuA Pectobacterium atrosepticum SCRI1043 16S rRNA pseudouridylate synthase A YP_050833.1 3083724 R 218491 CDS YP_050834.1 50121667 2885437 3084634..3084873 1 NC_004547.2 Similar to Escherichia coli hypothetical protein yech or b1906 SWALL:YECH_ECOLI (SWALL:P46887) (79 aa) fasta scores: E(): 5.8e-18, 62.02% id in 79 aa, and to Salmonella typhimurium, and Salmonella typhi cytoplasmic protein yech or stm1936 or sty2144 SWALL:Q8XGI3 (EMBL:AE008786) (79 aa) fasta scores: E(): 1.1e-16, 59.49% id in 79 aa; hypothetical protein 3084873 2885437 ECA2743 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050834.1 3084634 D 218491 CDS YP_050835.1 50121668 2885438 3084876..3086636 1 NC_004547.2 Similar to Yersinia pestis dead box helicase family protein ypo1265 or y2919 SWALL:AAM86469 (EMBL:AJ414147) (585 aa) fasta scores: E(): 6.6e-185, 80.3% id in 584 aa, and to Salmonella typhimurium, and Salmonella typhi ATP-dependent helicase yejh or stm2223 or sty2460 SWALL:Q8XGB8 (EMBL:AE008799) (586 aa) fasta scores: E(): 2.5e-180, 77.81% id in 586 aa; helicase 3086636 2885438 ECA2744 Pectobacterium atrosepticum SCRI1043 helicase YP_050835.1 3084876 D 218491 CDS YP_050836.1 50121669 2883131 3086967..3087251 1 NC_004547.2 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 3087251 rplY 2883131 rplY Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L25 YP_050836.1 3086967 D 218491 CDS YP_050837.1 50121670 2885439 3087351..3088499 1 NC_004547.2 Similar to Pseudomonas putida membrane protein, pp2419 SWALL:AAN68031 (EMBL:AE016783) (421 aa) fasta scores: E(): 2.1e-92, 61.37% id in 378 aa, and to Ralstonia solanacearum hypothetical protein rsc2728 or rs00126 SWALL:Q8XVU9 (EMBL:AL646071) (382 aa) fasta scores: E(): 2.9e-71, 49.86% id in 377 aa; hypothetical protein 3088499 2885439 ECA2746 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050837.1 3087351 D 218491 CDS YP_050838.1 50121671 2882108 complement(3088583..3089593) 1 NC_004547.2 Similar to Escherichia coli 37 kDa nucleoid-associated protein yejk or b2186 SWALL:NA37_ECOLI (SWALL:P33920) (334 aa) fasta scores: E(): 2.6e-104, 80.53% id in 334 aa; nucleoid-associated protein NdpA 3089593 2882108 ECA2747 Pectobacterium atrosepticum SCRI1043 nucleoid-associated protein NdpA YP_050838.1 3088583 R 218491 CDS YP_050839.1 50121672 2882109 3089796..3090026 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo1261 SWALL:Q8ZGM6 (EMBL:AJ414147) (75 aa) fasta scores: E(): 4.5e-22, 85.52% id in 76 aa, and to Salmonella typhimurium, and Salmonella typhi cytoplasmic protein yejl or stm2227 or sty2465 SWALL:Q8XEL6 (EMBL:AE008799) (75 aa) fasta scores: E(): 1.6e-19, 78.94% id in 76 aa; hypothetical protein 3090026 2882109 ECA2748 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050839.1 3089796 D 218491 CDS YP_050840.1 50121673 2881959 3090041..3091789 1 NC_004547.2 Similar to Salmonella typhi sulphatase sty2466 SWALL:Q8Z579 (EMBL:AL627273) (586 aa) fasta scores: E(): 5.5e-146, 60.47% id in 587 aa, and to Shigella flexneri sulfatase yejm or sf2275 SWALL:AAN43794 (EMBL:AE015243) (586 aa) fasta scores: E(): 3.6e-143, 59.11% id in 587 aa; sulfatase 3091789 2881959 ECA2749 Pectobacterium atrosepticum SCRI1043 sulfatase YP_050840.1 3090041 D 218491 CDS YP_050841.1 50121674 2881279 3092131..3093381 1 NC_004547.2 Similar to Escherichia coli prophage cp4-57 integrase inta or slpa or intx or b2622 SWALL:INTA_ECOLI (SWALL:P32053) (413 aa) fasta scores: E(): 1e-90, 58.56% id in 403 aa; prophage integrase 3093381 intA 2881279 intA Pectobacterium atrosepticum SCRI1043 prophage integrase YP_050841.1 3092131 D 218491 CDS YP_050842.1 50121675 2881960 3093528..3094412 1 NC_004547.2 phage-like protein 3094412 2881960 ECA2751 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_050842.1 3093528 D 218491 CDS YP_050843.1 50121676 2881961 3094518..3094733 1 NC_004547.2 Similar to Bacteriophage P4 hypothetical 9.7 kDa protein SWALL:Y9K_BPP4 (SWALL:P12552) (88 aa) fasta scores: E(): 0.034, 41.86% id in 43 aa, and to Pseudomonas aeruginosa phage-related protein SWALL:Q8GPP9 (EMBL:AF440524) (72 aa) fasta scores: E(): 0.0038, 31.66% id in 60 aa; hypothetical protein 3094733 2881961 ECA2752 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050843.1 3094518 D 218491 CDS YP_050844.1 50121677 2881962 3094786..3095613 1 NC_004547.2 Its C-terminal region is similar to Yersinia pestis prophage protein ypo1091 or y3086 SWALL:Q8ZH22 (EMBL:AJ414146) (180 aa) fasta scores: E(): 1.7e-06, 52.83% id in 53 aa; phage-like protein 3095613 2881962 ECA2753 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_050844.1 3094786 D 218491 CDS YP_050845.1 50121678 2881869 3095610..3098216 1 NC_004547.2 Similar to Escherichia coli O157:H7 alpha replication protein of prophage cp-933i z0339 or ecs0303 SWALL:Q8X7I5 (EMBL:AE005204) (796 aa) fasta scores: E(): 1.3e-10, 28.27% id in 633 aa, and to Pasteurella multocida hypothetical protein Pm1782 SWALL:Q9CK52 (EMBL:AE006215) (725 aa) fasta scores: E(): 9.7e-95, 45.25% id in 590 aa, and to Bacteriophage P4 DNA primase SWALL:Q8LTT9 (EMBL:AF509493) (362 aa) fasta scores: E(): 2.3e-41, 47.26% id in 347 aa; prophage primase 3098216 2881869 ECA2754 Pectobacterium atrosepticum SCRI1043 prophage primase YP_050845.1 3095610 D 218491 CDS YP_050846.1 50121679 2881870 3098462..3098917 1 NC_004547.2 hypothetical protein 3098917 2881870 ECA2755 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050846.1 3098462 D 218491 CDS YP_050847.1 50121680 2881871 3099005..3100030 1 NC_004547.2 hypothetical protein 3100030 2881871 ECA2756 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050847.1 3099005 D 218491 CDS YP_050848.1 50121681 2881999 3100258..3100503 1 NC_004547.2 Similar to Agrobacterium tumefaciens hypothetical protein atu1783 or agr_c_3279 SWALL:Q8UEH4 (EMBL:AE009134) (122 aa) fasta scores: E(): 4e-09, 46.83% id in 79 aa, and to Rhizobium loti hypothetical protein Msr2423 SWALL:Q98IF7 (EMBL:AP002999) (81 aa) fasta scores: E(): 1.1e-08, 45.2% id in 73 aa; hypothetical protein 3100503 2881999 ECA2757 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050848.1 3100258 D 218491 CDS YP_050849.1 50121682 2882000 3100493..3100777 1 NC_004547.2 Similar to Rhizobium sp. hypothetical 11.0 kDa protein Y4kP SWALL:Y4KP_RHISN (SWALL:P55534) (96 aa) fasta scores: E(): 4.6e-10, 43.82% id in 89 aa, and to Agrobacterium tumefaciens hypothetical protein atu1782 or agr_c_3278 SWALL:Q8UEH5 (EMBL:AE009134) (96 aa) fasta scores: E(): 4.5e-09, 42.22% id in 90 aa; hypothetical protein 3100777 2882000 ECA2758 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050849.1 3100493 D 218491 CDS YP_050850.1 50121683 2882001 3100823..3101182 1 NC_004547.2 hypothetical protein 3101182 2882001 ECA2759 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050850.1 3100823 D 218491 CDS YP_050851.1 50121684 2882015 complement(3101846..3102175) 1 NC_004547.2 Similar to Ralstonia solanacearum hypothetical protein rsc1958 or rs03532 SWALL:Q8XY05 (EMBL:AL646067) (113 aa) fasta scores: E(): 8.8e-34, 72.56% id in 113 aa, and to Bradyrhizobium japonicum Bll3987 protein Bll3987 SWALL:BAC49252 (EMBL:AP005949) (110 aa) fasta scores: E(): 3.7e-26, 58.18% id in 110 aa; hypothetical protein 3102175 2882015 ECA2760 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050851.1 3101846 R 218491 CDS YP_050852.1 50121685 2882016 complement(3102235..3102771) 1 NC_004547.2 Similar to Escherichia coli hypothetical protein ygap or b2668 SWALL:YGAP_ECOLI (SWALL:P55734) (174 aa) fasta scores: E(): 3.5e-33, 57.48% id in 167 aa, and to Salmonella typhi hypothetical protein Sty2918 SWALL:Q8Z4F4 (EMBL:AL627276) (175 aa) fasta scores: E(): 2.9e-30, 52.69% id in 167 aa; hypothetical protein 3102771 2882016 ECA2761 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050852.1 3102235 R 218491 CDS YP_050853.1 50121686 2882017 3103135..3104562 1 NC_004547.2 Similar to Yersinia pestis sugar transporter ypo1571 or y2593 SWALL:Q8ZFV6 (EMBL:AJ414149) (476 aa) fasta scores: E(): 5.3e-144, 75.37% id in 463 aa, and to Salmonella typhi inner membrane protein sty2216 SWALL:Q8Z5P2 (EMBL:AL627273) (485 aa) fasta scores: E(): 2.7e-124, 67.25% id in 455 aa; hypothetical protein 3104562 2882017 ECA2762 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050853.1 3103135 D 218491 CDS YP_050854.1 50121687 2881492 complement(3104605..3105774) 1 NC_004547.2 Similar to Escherichia coli cyanate transport protein CynX or b0341 SWALL:CYNX_ECOLI (SWALL:P17583) (384 aa) fasta scores: E(): 5.1e-43, 35.35% id in 379 aa, and to Pseudomonas indigofera IgiE SWALL:Q9RBX3 (EMBL:AF088856) (408 aa) fasta scores: E(): 8.8e-56, 43.65% id in 378 aa; transport protein 3105774 2881492 ECA2763 Pectobacterium atrosepticum SCRI1043 transport protein YP_050854.1 3104605 R 218491 CDS YP_050855.1 50121688 2883316 complement(3106053..3106568) 1 NC_004547.2 OmpX; involved in cell adhesion; forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface; mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains; outer membrane protein X 3106568 ompX 2883316 ompX Pectobacterium atrosepticum SCRI1043 outer membrane protein X YP_050855.1 3106053 R 218491 CDS YP_050856.1 50121689 2881493 3106945..3107832 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo2507 or y1680 SWALL:AAM85249 (EMBL:AJ414152) (295 aa) fasta scores: E(): 8.1e-81, 73.92% id in 280 aa, and to Salmonella typhimurium hypothetical transport protein ybif or stm0832 SWALL:YBIF_SALTY (SWALL:P74867) (295 aa) fasta scores: E(): 8.1e-74, 71.53% id in 274 aa; threonine and homoserine efflux system 3107832 2881493 ECA2765 Pectobacterium atrosepticum SCRI1043 threonine and homoserine efflux system YP_050856.1 3106945 D 218491 CDS YP_050857.1 50121690 2881494 complement(3107820..3108374) 1 NC_004547.2 Similar to Vibrio vulnificus adenylate kinase vv12472 SWALL:AAO10836 (EMBL:AE016805) (177 aa) fasta scores: E(): 9.2e-37, 55.42% id in 175 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4799 SWALL:Q9HV10 (EMBL:AE004893) (192 aa) fasta scores: E(): 4.4e-17, 32.92% id in 164 aa; hypothetical protein 3108374 2881494 ECA2766 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050857.1 3107820 R 218491 CDS YP_050858.1 50121691 2882216 3108684..3109187 1 NC_004547.2 binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage; DNA starvation/stationary phase protection protein Dps 3109187 dps 2882216 dps Pectobacterium atrosepticum SCRI1043 DNA starvation/stationary phase protection protein Dps YP_050858.1 3108684 D 218491 CDS YP_050859.1 50121692 2881770 3109585..3110331 1 NC_004547.2 similar to periplasmic-binding component of ABC transporters; glutamine ABC transporter periplasmic protein 3110331 glnH 2881770 glnH Pectobacterium atrosepticum SCRI1043 glutamine ABC transporter periplasmic protein YP_050859.1 3109585 D 218491 CDS YP_050860.1 50121693 2881776 3110358..3111017 1 NC_004547.2 similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; glutamine ABC transporter permease 3111017 glnP 2881776 glnP Pectobacterium atrosepticum SCRI1043 glutamine ABC transporter permease YP_050860.1 3110358 D 218491 CDS YP_050861.1 50121694 2881329 3111014..3111736 1 NC_004547.2 similar to ATP-binding component of ABC transporters; glutamine ABC transporter ATP-binding protein 3111736 glnQ 2881329 glnQ Pectobacterium atrosepticum SCRI1043 glutamine ABC transporter ATP-binding protein YP_050861.1 3111014 D 218491 CDS YP_050862.1 50121695 2881495 complement(3111776..3113644) 1 NC_004547.2 Similar to Vibrio cholerae peptidase, vc1983 SWALL:Q9KQL5 (EMBL:AE004273) (615 aa) fasta scores: E(): 4.1e-135, 56.13% id in 611 aa, and to Vibrio vulnificus oligoendopeptidase F vv21400 SWALL:AAO08281 (EMBL:AE016813) (615 aa) fasta scores: E(): 1.7e-132, 53.34% id in 613 aa; peptidase 3113644 2881495 ECA2771 Pectobacterium atrosepticum SCRI1043 peptidase YP_050862.1 3111776 R 218491 CDS YP_050863.1 50121696 2885309 complement(3113731..3114699) 1 NC_004547.2 Similar to Escherichia coli hypothetical protein ybib or b0800 SWALL:YBIB_ECOLI (SWALL:P30177) (320 aa) fasta scores: E(): 8.8e-82, 63.95% id in 319 aa, and to Yersinia pestis glycosyl transferase ypo2522 or y1665 SWALL:Q8ZDN8 (EMBL:AJ414152) (319 aa) fasta scores: E(): 3.3e-79, 66.03% id in 318 aa; glycosyl transferase family protein 3114699 2885309 ECA2772 Pectobacterium atrosepticum SCRI1043 glycosyl transferase family protein YP_050863.1 3113731 R 218491 CDS YP_050864.1 50121697 2885310 complement(3114709..>3114921) 1 NC_004547.2 Similar to the N-terminal regions of many including Erwinia carotovora tail sheath protein SWALL:Q9WX99 (EMBL:AB017338) (475 aa) fasta scores: E(): 1.1e-10, 87.23% id in 47 aa, and to Pectobacterium carotovorum subsp. carotovorum tail sheath protein SWALL:Q9KW62 (EMBL:AB045036) (475 aa) fasta scores: E(): 1.1e-10, 87.23% id in 47 aa; bacteriophage tail sheath protein (partial) >3114921 2885310 ECA2773 Pectobacterium atrosepticum SCRI1043 bacteriophage tail sheath protein (partial) YP_050864.1 3114709 R 218491 CDS YP_050865.1 50121698 2885311 complement(3114911..3115108) 1 NC_004547.2 Similar to Salmonella typhimurium cytoplasmic protein stm4214 SWALL:Q8ZKJ1 (EMBL:AE008897) (65 aa) fasta scores: E(): 2.6e-10, 54.68% id in 64 aa, and to Salmonella typhi hypothetical protein Sty1624 SWALL:Q8Z6U2 (EMBL:AL627270) (84 aa) fasta scores: E(): 6.4e-10, 64.58% id in 48 aa; hypothetical protein 3115108 2885311 ECA2774 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050865.1 3114911 R 218491 CDS YP_050866.1 50121699 2885312 complement(3115105..3115545) 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty1623 SWALL:Q8Z6U3 (EMBL:AL627270) (154 aa) fasta scores: E(): 3e-18, 41.09% id in 146 aa, and to Salmonella typhimurium cytoplasmic protein stm4215 SWALL:Q8ZKJ0 (EMBL:AE008897) (151 aa) fasta scores: E(): 8.9e-12, 43.24% id in 111 aa; hypothetical protein 3115545 2885312 ECA2775 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050866.1 3115105 R 218491 CDS YP_050867.1 50121700 2885149 complement(3115834..3116145) 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty1613 SWALL:Q8Z6V3 (EMBL:AL627270) (103 aa) fasta scores: E(): 9.4e-20, 59.4% id in 101 aa; hypothetical protein 3116145 2885149 ECA2776 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050867.1 3115834 R 218491 CDS YP_050868.1 50121701 2885150 complement(3116138..3116467) 1 NC_004547.2 Similar to Salmonella typhimurium inner membrane protein stm4216 SWALL:Q8ZKI9 (EMBL:AE008897) (104 aa) fasta scores: E(): 5e-27, 69.15% id in 107 aa, and to Salmonella typhi membrane protein sty1612 SWALL:Q8Z6V4 (EMBL:AL627270) (108 aa) fasta scores: E(): 5.4e-22, 60.18% id in 108 aa; hypothetical protein 3116467 2885150 ECA2777 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050868.1 3116138 R 218491 CDS YP_050869.1 50121702 2884628 complement(3116457..3117131) 1 NC_004547.2 Similar to Salmonella typhi lipoprotein sty1611 SWALL:Q8Z6V5 (EMBL:AL627270) (216 aa) fasta scores: E(): 2.4e-21, 43.13% id in 204 aa; hypothetical protein 3117131 2884628 ECA2778 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050869.1 3116457 R 218491 CDS YP_050870.1 50121703 2884629 complement(3117121..3117732) 1 NC_004547.2 Similar to Salmonella typhimurium soluble lytic murein transglycosylase stm4217 SWALL:Q8ZKI8 (EMBL:AE008897) (201 aa) fasta scores: E(): 9.4e-53, 62.87% id in 202 aa; transglycosylase 3117732 2884629 ECA2779 Pectobacterium atrosepticum SCRI1043 transglycosylase YP_050870.1 3117121 R 218491 CDS YP_050871.1 50121704 2884630 complement(3117734..3118063) 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty1608 SWALL:Q8Z6V8 (EMBL:AL627270) (116 aa) fasta scores: E(): 6.3e-27, 66.03% id in 106 aa, and to Salmonella typhimurium inner membrane protein stm4218 SWALL:Q8ZKI7 (EMBL:AE008897) (95 aa) fasta scores: E(): 1.9e-12, 52.29% id in 109 aa; hypothetical protein 3118063 2884630 ECA2780 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050871.1 3117734 R 218491 CDS YP_050872.1 50121705 2882497 complement(3118174..3119520) 1 NC_004547.2 Similar to Erwinia chrysanthemi proteases secretion protein PrtF precursor SWALL:PRTF_ERWCH (SWALL:P23598) (462 aa) fasta scores: E(): 3.6e-123, 73.25% id in 445 aa. Also similar to ECA1534 (48.956% in 431 aa overlap; protease secretion protein 3119520 prtF 2882497 prtF Pectobacterium atrosepticum SCRI1043 protease secretion protein YP_050872.1 3118174 R 218491 CDS YP_050873.1 50121706 2882496 complement(3119523..3120851) 1 NC_004547.2 Similar to Erwinia chrysanthemi proteases secretion protein PrtE SWALL:PRTE_ERWCH (SWALL:P23597) (448 aa) fasta scores: E(): 9.7e-110, 72.33% id in 441 aa. Also similar to ECA1535 (47.529% in 425 aa overlap; protease secretion protein 3120851 prtE 2882496 prtE Pectobacterium atrosepticum SCRI1043 protease secretion protein YP_050873.1 3119523 R 218491 CDS YP_050874.1 50121707 2882534 complement(3120880..3122607) 1 NC_004547.2 Similar to Erwinia chrysanthemi proteases secretion ATP-binding protein PrtD SWALL:PRTD_ERWCH (SWALL:P23596) (575 aa) fasta scores: E(): 1.2e-155, 74.6% id in 575 aa. Also similar to ECA1536 (58.719% in 562 aa overlap; protease secretion ATP-binding protein 3122607 prtD 2882534 prtD Pectobacterium atrosepticum SCRI1043 protease secretion ATP-binding protein YP_050874.1 3120880 R 218491 CDS YP_050875.1 50121708 2881773 complement(3122625..3122936) 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum protease inhibitor Inh SWALL:Q9RB19 (EMBL:AF141295) (103 aa) fasta scores: E(): 4.8e-37, 89.32% id in 103 aa, and to Erwinia chrysanthemi proteinase inhibitor precursor Inh SWALL:INH_ERWCH (SWALL:P18958) (120 aa) fasta scores: E(): 7.6e-21, 57.28% id in 103 aa; protease inhibitor 3122936 inh 2881773 inh Pectobacterium atrosepticum SCRI1043 protease inhibitor YP_050875.1 3122625 R 218491 CDS YP_050876.1 50121709 2882498 complement(3123040..3124449) 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum metalloprotease PrtW SWALL:Q9RB20 (EMBL:AF141295) (473 aa) fasta scores: E(): 4.7e-142, 84.51% id in 478 aa, and to Erwinia chrysanthemi secreted protease C precursor PrtC SWALL:PRTX_ERWCH (SWALL:P19144) (478 aa) fasta scores: E(): 5.8e-116, 66.03% id in 471 aa; metalloprotease 3124449 prtW 2882498 prtW Pectobacterium atrosepticum SCRI1043 metalloprotease YP_050876.1 3123040 R 218491 CDS YP_050877.1 50121710 2883355 complement(3125091..3127190) 1 NC_004547.2 helicase involved in DNA repair and perhaps also replication; ATP-dependent DNA helicase DinG 3127190 dinG 2883355 dinG Pectobacterium atrosepticum SCRI1043 ATP-dependent DNA helicase DinG YP_050877.1 3125091 R 218491 CDS YP_050878.1 50121711 2884631 3127356..3128189 1 NC_004547.2 Similar to Pseudomonas putida transcriptional regulator, AraC family pp3022 SWALL:AAN68630 (EMBL:AE016785) (269 aa) fasta scores: E(): 5.3e-24, 35.03% id in 274 aa, and to Rhizobium meliloti transcription regulator protein r01128 or smc00558 SWALL:Q92R06 (EMBL:AL591786) (285 aa) fasta scores: E(): 1.2e-17, 29.65% id in 263 aa; AraC family transcriptional regulator 3128189 2884631 ECA2787 Pectobacterium atrosepticum SCRI1043 AraC family transcriptional regulator YP_050878.1 3127356 D 218491 CDS YP_050879.1 50121712 2884819 3128242..3128889 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 threonine efflux protein RhtC or b3823 or z5344 or ecs4753 SWALL:RHTC_ECOLI (SWALL:P27846) (206 aa) fasta scores: E(): 2.5e-13, 32.05% id in 209 aa, and to Pseudomonas putida transporter, LysE family pp3021 SWALL:AAN68629 (EMBL:AE016785) (204 aa) fasta scores: E(): 8.9e-26, 42.71% id in 199 aa; LysE family translocator 3128889 2884819 ECA2788 Pectobacterium atrosepticum SCRI1043 LysE family translocator YP_050879.1 3128242 D 218491 CDS YP_050880.1 50121713 2884820 complement(3129173..3129712) 1 NC_004547.2 Similar to Escherichia coli isopentenyl-diphosphate delta-isomerase Idi or b2889 SWALL:IDI_ECOLI (SWALL:Q46822) (182 aa) fasta scores: E(): 2.5e-13, 33.12% id in 163 aa, and to Streptomyces coelicolor probable isopentenyl-diphosphate delta-isomerase idi or sco6750 or sc5f2a.33C SWALL:IDI_STRCO (SWALL:Q9X7Q6) (197 aa) fasta scores: E(): 9.6e-20, 42.58% id in 155 aa; isopentenyl-diphosphate delta-isomerase 3129712 2884820 ECA2789 Pectobacterium atrosepticum SCRI1043 isopentenyl-diphosphate delta-isomerase YP_050880.1 3129173 R 218491 CDS YP_050881.1 50121714 2881981 complement(3129835..3132141) 1 NC_004547.2 Similar to Escherichia coli periplasmic beta-glucosidase precursor BglX or b2132 SWALL:BGLX_ECOLI (SWALL:P33363) (765 aa) fasta scores: E(): 3.4e-216, 73.3% id in 768 aa, and to Salmonella typhimurium periplasmic beta-glucosidase precursor BglX or stm2166 SWALL:BGLX_SALTY (SWALL:Q56078) (765 aa) fasta scores: E(): 3.9e-217, 73.17% id in 768 aa; periplasmic beta-glucosidase 3132141 bglX 2881981 bglX Pectobacterium atrosepticum SCRI1043 periplasmic beta-glucosidase YP_050881.1 3129835 R 218491 CDS YP_050882.1 50121715 2884821 3132533..3133219 1 NC_004547.2 Similar to Erwinia chrysanthemi hypothetical protein SWALL:Q8KKB6 (EMBL:AF503595) (205 aa) fasta scores: E(): 1.4e-53, 72.22% id in 180 aa, and to Agrobacterium tumefaciens glutathione S-transferase atu1394 or agr_c_2575 SWALL:Q8UFK3 (EMBL:AE009100) (254 aa) fasta scores: E(): 3.8e-56, 58.77% id in 228 aa; glutathione S-transferase 3133219 2884821 ECA2791 Pectobacterium atrosepticum SCRI1043 glutathione S-transferase YP_050882.1 3132533 D 218491 CDS YP_050883.1 50121716 2881428 complement(3133295..3134242) 1 NC_004547.2 specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7; D-alanyl-D-alanine endopeptidase 3134242 pbpG 2881428 pbpG Pectobacterium atrosepticum SCRI1043 D-alanyl-D-alanine endopeptidase YP_050883.1 3133295 R 218491 CDS YP_050884.1 50121717 2885014 complement(3134393..3134902) 1 NC_004547.2 Similar to Ralstonia solanacearum probable transmembrane protein rsp1154 or rs05433 SWALL:Q8XQR7 (EMBL:AL646083) (164 aa) fasta scores: E(): 5.6e-06, 30.76% id in 169 aa; hypothetical protein 3134902 2885014 ECA2793 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050884.1 3134393 R 218491 CDS YP_050885.1 50121718 2885015 complement(3134965..3135321) 1 NC_004547.2 Similar to Thermoanaerobacter tengcongensis major membrane immunogen tte2480 SWALL:Q8R7D5 (EMBL:AE013189) (138 aa) fasta scores: E(): 0.61, 35% id in 140 aa, and to Clostridium acetobutylicum uncharacterized conserved protein cac2767 SWALL:Q97FH2 (EMBL:AE007774) (133 aa) fasta scores: E(): 0.0033, 31.86% id in 91 aa; hypothetical protein 3135321 2885015 ECA2794 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050885.1 3134965 R 218491 CDS YP_050886.1 50121719 2883327 complement(3135382..3135924) 1 NC_004547.2 Similar to Aeromonas hydrophila adenylate cyclase CyaB SWALL:O69199 (EMBL:AJ223730) (191 aa) fasta scores: E(): 1.8e-29, 46.55% id in 174 aa, and to Yersinia pestis adenylate cyclase 2 CyaB or ypo1178 or y3011 SWALL:Q8ZGU9 (EMBL:AJ414146) (179 aa) fasta scores: E(): 5.7e-34, 52.51% id in 179 aa; adenylate cyclase 3135924 cyaB 2883327 cyaB Pectobacterium atrosepticum SCRI1043 adenylate cyclase YP_050886.1 3135382 R 218491 CDS YP_050887.1 50121720 2885016 complement(3136322..3136870) 1 NC_004547.2 hypothetical protein 3136870 2885016 ECA2796 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050887.1 3136322 R 218491 CDS YP_050888.1 50121721 2882944 complement(3136895..3137830) 1 NC_004547.2 converts homocysteine and S-adenosyl-methionine to methionine and S-adenosyl-homocysteine or S-methyl-methionine and homocysteine to two methionines; homocysteine methyltransferase 3137830 mmuM 2882944 mmuM Pectobacterium atrosepticum SCRI1043 homocysteine methyltransferase YP_050888.1 3136895 R 218491 CDS YP_050889.1 50121722 2882945 complement(3137823..3139235) 1 NC_004547.2 Similar to Escherichia coli probable S-methylmethionine permease MmuP or b0260 SWALL:MMUP_ECOLI (SWALL:Q47689) (467 aa) fasta scores: E(): 1.6e-153, 83.59% id in 445 aa; S-methylmethionine transporter 3139235 mmuP 2882945 mmuP Pectobacterium atrosepticum SCRI1043 S-methylmethionine transporter YP_050889.1 3137823 R 218491 CDS YP_050890.1 50121723 2885017 complement(3139631..3140563) 1 NC_004547.2 Similar to Escherichia coli hypothetical protein yohi yohi or b2140 SWALL:YOHI_ECOLI (SWALL:P33371) (315 aa) fasta scores: E(): 2.9e-108, 85.34% id in 307 aa, and to Yersinia pestis hypothetical protein ypo1175 ypo1175 or y3015 SWALL:Q8ZGV2 (EMBL:AJ414146) (314 aa) fasta scores: E(): 1.2e-107, 87.62% id in 307 aa; tRNA-dihydrouridine synthase C 3140563 2885017 ECA2799 Pectobacterium atrosepticum SCRI1043 tRNA-dihydrouridine synthase C YP_050890.1 3139631 R 218491 CDS YP_050891.1 50121724 2885011 3140808..3141479 1 NC_004547.2 Similar to Xylella fastidiosa hypothetical protein Xf2273 SWALL:Q9PB71 (EMBL:AE004039) (236 aa) fasta scores: E(): 4.2e-73, 76.52% id in 213 aa, and to Xanthomonas axonopodis hypothetical protein Xac0332 SWALL:Q8PQJ1 (EMBL:AE011659) (218 aa) fasta scores: E(): 1.2e-72, 74.88% id in 215 aa; hypothetical protein 3141479 2885011 ECA2800 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050891.1 3140808 D 218491 CDS YP_050892.1 50121725 2885012 complement(3141526..3143121) 1 NC_004547.2 Similar to Escherichia coli periplasmic dipeptide transport protein precursor DppA or b3544 SWALL:DPPA_ECOLI (SWALL:P23847) (535 aa) fasta scores: E(): 9.4e-154, 66.66% id in 531 aa; periplasmic dipeptide transport protein 3143121 2885012 ECA2801 Pectobacterium atrosepticum SCRI1043 periplasmic dipeptide transport protein YP_050892.1 3141526 R 218491 CDS YP_050893.1 50121726 2885013 3143262..3144491 1 NC_004547.2 catalyzes the release of the N-terminal amino acid from a tripeptide; peptidase T 3144491 2885013 ECA2802 Pectobacterium atrosepticum SCRI1043 peptidase T YP_050893.1 3143262 D 218491 CDS YP_050894.1 50121727 2885008 complement(3144548..3145018) 1 NC_004547.2 Similar to Yersinia enterocolitica hypothetical 17.2 kDa protein SWALL:Q9F4G8 (EMBL:AY008264) (152 aa) fasta scores: E(): 1e-21, 40.13% id in 152 aa, and to Pseudomonas resinovorans hypothetical protein SWALL:BAC41696 (EMBL:AB088420) (145 aa) fasta scores: E(): 4.7e-11, 36.77% id in 155 aa; hypothetical protein 3145018 2885008 ECA2803 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050894.1 3144548 R 218491 CDS YP_050895.1 50121728 2885009 complement(3145015..3145458) 1 NC_004547.2 Similar to Yersinia enterocolitica hypothetical 16.3 kDa protein SWALL:Q9F4G7 (EMBL:AY008264) (148 aa) fasta scores: E(): 2.5e-16, 40.14% id in 142 aa, and to Yersinia pestis hypothetical protein ypo2345 or y1987 SWALL:Q8ZE40 (EMBL:AJ414152) (148 aa) fasta scores: E(): 1.3e-15, 38.84% id in 139 aa; hypothetical protein 3145458 2885009 ECA2804 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050895.1 3145015 R 218491 CDS YP_050896.1 50121729 2884635 complement(3145672..3147123) 1 NC_004547.2 this helicase is not essential cell growth; ATP-dependent RNA helicase RhlE 3147123 rhlE 2884635 rhlE Pectobacterium atrosepticum SCRI1043 ATP-dependent RNA helicase RhlE YP_050896.1 3145672 R 218491 CDS YP_050897.1 50121730 2881349 complement(3147401..3148240) 1 NC_004547.2 Similar to Erwinia chrysanthemi achromobactin transport ATP-binding protein CbrD SWALL:CBRD_ERWCH (SWALL:Q47087) (273 aa) fasta scores: E(): 3.9e-64, 70.75% id in 253 aa; achromobactin transport ATP-binding protein 3148240 cbrD 2881349 cbrD Pectobacterium atrosepticum SCRI1043 achromobactin transport ATP-binding protein YP_050897.1 3147401 R 218491 CDS YP_050898.1 50121731 2881456 complement(3148253..3149284) 1 NC_004547.2 Similar to Erwinia chrysanthemi achromobactin transport system permease protein CbrC SWALL:CBRC_ERWCH (SWALL:Q47086) (349 aa) fasta scores: E(): 4.9e-69, 61.91% id in 344 aa; achromobactin transport system permease 3149284 cbrC 2881456 cbrC Pectobacterium atrosepticum SCRI1043 achromobactin transport system permease YP_050898.1 3148253 R 218491 CDS YP_050899.1 50121732 2881455 complement(3149277..3150266) 1 NC_004547.2 Similar to Erwinia chrysanthemi achromobactin transport system permease protein CbrB SWALL:CBRB_ERWCH (SWALL:Q47085) (340 aa) fasta scores: E(): 8.6e-66, 58.15% id in 325 aa; achromobactin transport system permease 3150266 cbrB 2881455 cbrB Pectobacterium atrosepticum SCRI1043 achromobactin transport system permease YP_050899.1 3149277 R 218491 CDS YP_050900.1 50121733 2881454 complement(3150263..3151270) 1 NC_004547.2 Similar to Erwinia chrysanthemi achromobactin-binding periplasmic protein precursor CbrA SWALL:CBRA_ERWCH (SWALL:Q47084) (305 aa) fasta scores: E(): 1.5e-62, 63.74% id in 262 aa; achromobactin-binding periplasmic protein 3151270 cbrA 2881454 cbrA Pectobacterium atrosepticum SCRI1043 achromobactin-binding periplasmic protein YP_050900.1 3150263 R 218491 CDS YP_050901.1 50121734 2884690 complement(3151288..3153402) 1 NC_004547.2 Similar to Erwinia chrysanthemi Acr SWALL:Q93AT9 (EMBL:AF416740) (482 aa) fasta scores: E(): 2.5e-108, 57.76% id in 483 aa; TonB-dependent ferric achromobactin receptor 3153402 acr 2884690 acr Pectobacterium atrosepticum SCRI1043 TonB-dependent ferric achromobactin receptor YP_050901.1 3151288 R 218491 CDS YP_050902.1 50121735 2885010 3153545..3153841 1 NC_004547.2 hypothetical protein 3153841 2885010 ECA2811 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050902.1 3153545 D 218491 CDS YP_050903.1 50121736 2885004 complement(3153852..3154559) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo1163 or y3018 SWALL:Q8ZGW1 (EMBL:AJ414146) (236 aa) fasta scores: E(): 7.9e-73, 86.01% id in 236 aa, and to Salmonella typhimurium permease ybhl or stm0807 SWALL:Q8ZQP9 (EMBL:AE008733) (234 aa) fasta scores: E(): 1.7e-70, 83.4% id in 235 aa; hypothetical protein 3154559 2885004 ECA2812 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050903.1 3153852 R 218491 CDS YP_050904.1 50121737 2882318 complement(3154672..3155124) 1 NC_004547.2 catalyzes the conversion of molybdopterin precursor Z into molybdopterin; molybdopterin guanine dinucleotide biosynthesis protein MoaE 3155124 moaE 2882318 moaE Pectobacterium atrosepticum SCRI1043 molybdopterin guanine dinucleotide biosynthesis protein MoaE YP_050904.1 3154672 R 218491 CDS YP_050905.1 50121738 2882317 complement(3155127..3155372) 1 NC_004547.2 catalyzes the conversion of molybdopterin precursor Z into molybdopterin; molybdopterin synthase small subunit 3155372 moaD 2882317 moaD Pectobacterium atrosepticum SCRI1043 molybdopterin synthase small subunit YP_050905.1 3155127 R 218491 CDS YP_050906.1 50121739 2882845 complement(3155369..3155863) 1 NC_004547.2 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 3155863 moaC 2882845 moaC Pectobacterium atrosepticum SCRI1043 molybdenum cofactor biosynthesis protein MoaC YP_050906.1 3155369 R 218491 CDS YP_050907.1 50121740 2882844 complement(3155882..3156400) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 molybdenum cofactor biosynthesis protein B MoaB or ChlA2 or b0782 or z1001 or ecs0860 SWALL:MOAB_ECOLI (SWALL:P30746) (169 aa) fasta scores: E(): 4.2e-45, 70.41% id in 169 aa; molybdenum cofactor biosynthesis protein B 3156400 moaB 2882844 moaB Pectobacterium atrosepticum SCRI1043 molybdenum cofactor biosynthesis protein B YP_050907.1 3155882 R 218491 CDS YP_050908.1 50121741 2882843 complement(3156435..3157424) 1 NC_004547.2 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 3157424 moaA 2882843 moaA Pectobacterium atrosepticum SCRI1043 molybdenum cofactor biosynthesis protein A YP_050908.1 3156435 R 218491 CDS YP_050909.1 50121742 2885005 3157972..3158883 1 NC_004547.2 Similar to Salmonella typhimurium hypothetical upf0052 protein ybhk or stm0801 SWALL:YBHK_SALTY (SWALL:P58586) (302 aa) fasta scores: E(): 1.5e-88, 79.47% id in 302 aa, and to Escherichia coli O6 hypothetical protein ybhk or c0861 SWALL:Q8FJP7 (EMBL:AE016757) (322 aa) fasta scores: E(): 2.7e-87, 78.8% id in 302 aa; hypothetical protein 3158883 2885005 ECA2818 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050909.1 3157972 D 218491 CDS YP_050910.1 50121743 2885006 complement(3158880..3159311) 1 NC_004547.2 Weakly similar to Bacillus subtilis hypothetical protein YsfE SWALL:P94533 (EMBL:Z75208) (80 aa) fasta scores: E(): 0.92, 30% id in 60 aa; hypothetical protein 3159311 2885006 ECA2819 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050910.1 3158880 R 218491 CDS YP_050911.1 50121744 2882960 complement(3159374..3161386) 1 NC_004547.2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 3161386 uvrB 2882960 uvrB Pectobacterium atrosepticum SCRI1043 excinuclease ABC subunit B YP_050911.1 3159374 R 218491 CDS YP_050912.1 50121745 2885007 3161430..3161651 1 NC_004547.2 Doubtful CDS. No significant database matches; hypothetical protein 3161651 2885007 ECA2821 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050912.1 3161430 D 218491 CDS YP_050913.1 50121746 2881979 complement(3162450..3163130) 1 NC_004547.2 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; dithiobiotin synthetase 3163130 bioD 2881979 bioD Pectobacterium atrosepticum SCRI1043 dithiobiotin synthetase YP_050913.1 3162450 R 218491 CDS YP_050914.1 50121747 2881978 complement(3163123..3163884) 1 NC_004547.2 Similar to Escherichia coli biotin synthesis protein BioC or b0777 SWALL:BIOC_ECOLI (SWALL:P12999) (251 aa) fasta scores: E(): 2e-48, 54.8% id in 250 aa, and to Erwinia herbicola biotin synthesis protein BioC SWALL:BIOC_ERWHE (SWALL:O06898) (251 aa) fasta scores: E(): 1.1e-43, 52.22% id in 247 aa; biotin synthesis protein 3163884 bioC 2881978 bioC Pectobacterium atrosepticum SCRI1043 biotin synthesis protein YP_050914.1 3163123 R 218491 CDS YP_050915.1 50121748 2881980 complement(3163865..3165022) 1 NC_004547.2 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; 8-amino-7-oxononanoate synthase 3165022 bioF 2881980 bioF Pectobacterium atrosepticum SCRI1043 8-amino-7-oxononanoate synthase YP_050915.1 3163865 R 218491 CDS YP_050916.1 50121749 2881983 complement(3165062..3166099) 1 NC_004547.2 Similar to Escherichia coli biotin synthase BioB or b0775 SWALL:BIOB_ECOLI (SWALL:P12996) (346 aa) fasta scores: E(): 1.5e-117, 83.72% id in 344 aa, and to Erwinia herbicola biotin synthase BioB SWALL:BIOB_ERWHE (SWALL:Q47862) (346 aa) fasta scores: E(): 6.2e-119, 84.88% id in 344 aa; biotin synthase 3166099 bioB 2881983 bioB Pectobacterium atrosepticum SCRI1043 biotin synthase YP_050916.1 3165062 R 218491 CDS YP_050917.1 50121750 2881982 3166195..3167499 1 NC_004547.2 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 3167499 bioA 2881982 bioA Pectobacterium atrosepticum SCRI1043 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_050917.1 3166195 D 218491 CDS YP_050918.1 50121751 2882539 3167776..3168570 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum beta(1,4)-glucan glucanohydrolase CelB SWALL:O31030 (EMBL:AF025769) (264 aa) fasta scores: E(): 1.1e-97, 91.66% id in 264 aa, and to Erwinia carotovora endoglucanase S precursor CelS SWALL:GUNS_ERWCA (SWALL:P16630) (264 aa) fasta scores: E(): 1.9e-93, 85.6% id in 264 aa; beta(1,4)-glucan glucanohydrolase 3168570 celB 2882539 celB Pectobacterium atrosepticum SCRI1043 beta(1,4)-glucan glucanohydrolase YP_050918.1 3167776 D 218491 CDS YP_050919.1 50121752 2884998 3168781..3169188 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo1514 SWALL:Q8ZG06 (EMBL:AJ414148) (135 aa) fasta scores: E(): 5.1e-33, 66.15% id in 130 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri hypothetical protein yohj or b2141 or c2673 or sf2226 SWALL:YOHJ_ECOLI (SWALL:P33372) (132 aa) fasta scores: E(): 4.3e-32, 64.84% id in 128 aa; hypothetical protein 3169188 2884998 ECA2828 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050919.1 3168781 D 218491 CDS YP_050920.1 50121753 2884999 3169188..3169883 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi transmembrane protein yohk or stm2182 or sty2412 SWALL:Q8XGP7 (EMBL:AE008797) (231 aa) fasta scores: E(): 2.5e-65, 80.17% id in 227 aa, and to Yersinia pestis membrane protein ypo1513 or y2655 SWALL:Q8ZG07 (EMBL:AJ414148) (231 aa) fasta scores: E(): 1e-63, 76.62% id in 231 aa; hypothetical protein 3169883 2884999 ECA2829 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050920.1 3169188 D 218491 CDS YP_050921.1 50121754 2881831 3170057..3170947 1 NC_004547.2 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; cytidine deaminase 3170947 cdd 2881831 cdd Pectobacterium atrosepticum SCRI1043 cytidine deaminase YP_050921.1 3170057 D 218491 CDS YP_050922.1 50121755 2884400 3171157..3172854 1 NC_004547.2 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; malate dehydrogenase 3172854 sfcA 2884400 sfcA Pectobacterium atrosepticum SCRI1043 malate dehydrogenase YP_050922.1 3171157 D 218491 CDS YP_050923.1 50121756 2885000 complement(3172911..3173816) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi ABC transporter inner membrane component ylid or stm0851 or sty0890 SWALL:Q8XF88 (EMBL:AE008735) (303 aa) fasta scores: E(): 9.7e-95, 79.19% id in 298 aa, and to Shigella flexneri transport system permease protein ylid or sf0781.1 SWALL:AAN42416 (EMBL:AE015107) (303 aa) fasta scores: E(): 1.3e-94, 78.18% id in 298 aa; ABC transporter permease 3173816 2885000 ECA2832 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_050923.1 3172911 R 218491 CDS YP_050924.1 50121757 2884994 complement(3173826..3174746) 1 NC_004547.2 Similar to Escherichia coli hypothetical ABC transporter permease protein ylic or b0831 SWALL:YLIC_ECOLI (SWALL:P75798) (306 aa) fasta scores: E(): 5.7e-103, 84.96% id in 306 aa, and to Salmonella typhi hypothetical ABC transporter permease protein ylic or sty0889 SWALL:Q8Z862 (EMBL:AL627268) (306 aa) fasta scores: E(): 1.2e-102, 84.96% id in 306 aa; ABC transporter permease 3174746 2884994 ECA2833 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_050924.1 3173826 R 218491 CDS YP_050925.1 50121758 2884995 complement(3174856..3176400) 1 NC_004547.2 Similar to Salmonella typhimurium ABC transporter periplasmic binding protein ylib or stm0849 SWALL:Q8ZQM3 (EMBL:AE008735) (512 aa) fasta scores: E(): 1.1e-154, 75.93% id in 507 aa, and to Escherichia coli binding protein ylib precursor ylib or b0830 SWALL:YLIB_ECOLI (SWALL:P75797) (512 aa) fasta scores: E(): 1.6e-153, 76.33% id in 507 aa; ABC transporter periplasmic-binding protein 3176400 2884995 ECA2834 Pectobacterium atrosepticum SCRI1043 ABC transporter periplasmic-binding protein YP_050925.1 3174856 R 218491 CDS YP_050926.1 50121759 2884996 complement(3176426..3178327) 1 NC_004547.2 Similar to Ralstonia solanacearum probable ATP-binding ABC transporter protein rsc1379 or rs04662 SWALL:Q8XZL6 (EMBL:AL646064) (627 aa) fasta scores: E(): 2.8e-161, 72.28% id in 617 aa, and to Salmonella typhimurium ATPase components of ABC-type transport system, contain duplicated atpase domain ylia or stm0848 SWALL:Q8ZQM4 (EMBL:AE008735) (623 aa) fasta scores: E(): 4.3e-153, 70.18% id in 607 aa; ABC transporter ATP-binding protein 3178327 2884996 ECA2835 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_050926.1 3176426 R 218491 CDS YP_050927.1 50121760 2881227 3178804..3180039 1 NC_004547.2 is involved in the formation of active molybdenum cofactor and the chelation of molybdenum; molybdopterin biosynthesis protein MoeA 3180039 moeA 2881227 moeA Pectobacterium atrosepticum SCRI1043 molybdopterin biosynthesis protein MoeA YP_050927.1 3178804 D 218491 CDS YP_050928.1 50121761 2881228 3180042..3180794 1 NC_004547.2 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; molybdopterin biosynthesis protein MoeB 3180794 moeB 2881228 moeB Pectobacterium atrosepticum SCRI1043 molybdopterin biosynthesis protein MoeB YP_050928.1 3180042 D 218491 CDS YP_050929.1 50121762 2884997 3180901..3181500 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein Pa2575 SWALL:Q9I0R1 (EMBL:AE004686) (200 aa) fasta scores: E(): 8.3e-53, 66.16% id in 198 aa, and to Listeria innocua hypothetical protein Lin2962 SWALL:Q926S9 (EMBL:AL596174) (199 aa) fasta scores: E(): 2.7e-48, 64.82% id in 199 aa; hypothetical protein 3181500 2884997 ECA2838 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050929.1 3180901 D 218491 CDS YP_050930.1 50121763 2884991 complement(3181565..3182488) 1 NC_004547.2 similar to YegS from E. coli; lipid kinase 3182488 2884991 ECA2839 Pectobacterium atrosepticum SCRI1043 lipid kinase YP_050930.1 3181565 R 218491 CDS YP_050931.1 50121764 2884992 3182764..3184236 1 NC_004547.2 Similar to Shewanella oneidensis GGDEF domain protein so4457 SWALL:AAN57422 (EMBL:AE015878) (485 aa) fasta scores: E(): 2e-99, 51.03% id in 482 aa, and to Vibrio cholerae GGDEF family protein vc2224 SWALL:Q9KPY8 (EMBL:AE004294) (512 aa) fasta scores: E(): 2.3e-83, 45.97% id in 485 aa; hypothetical protein 3184236 2884992 ECA2840 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050931.1 3182764 D 218491 CDS YP_050932.1 50121765 2884993 complement(3184360..3185100) 1 NC_004547.2 Similar to Pseudomonas putida transcriptional regulator, GntR family pp2066 SWALL:AAN67680 (EMBL:AE016781) (254 aa) fasta scores: E(): 1.5e-32, 40.83% id in 240 aa, and to Streptomyces coelicolor GntR-family transcriptional regulator sco5231 or sc7e4.28C SWALL:Q9K492 (EMBL:AL939123) (254 aa) fasta scores: E(): 8.3e-10, 31.53% id in 241 aa; GntR family transcriptional regulator 3185100 2884993 ECA2841 Pectobacterium atrosepticum SCRI1043 GntR family transcriptional regulator YP_050932.1 3184360 R 218491 CDS YP_050933.1 50121766 2881429 3185328..3186677 1 NC_004547.2 Similar to Acinetobacter calcoaceticus 3-carboxy-cis,cis-muconate cycloisomerase PcaB SWALL:PCAB_ACICA (SWALL:Q59092) (452 aa) fasta scores: E(): 2.3e-62, 41.03% id in 446 aa, and to Bradyrhizobium japonicum pcab protein PcaB or bll7942 SWALL:BAC53207 (EMBL:AP005964) (453 aa) fasta scores: E(): 1.1e-126, 72.93% id in 447 aa; 3-carboxy-cis,cis-muconate cycloisomerase 3186677 pcaB 2881429 pcaB Pectobacterium atrosepticum SCRI1043 3-carboxy-cis,cis-muconate cycloisomerase YP_050933.1 3185328 D 218491 CDS YP_050934.1 50121767 2884988 3186824..3188245 1 NC_004547.2 Similar to Clostridium acetobutylicum 2-oxoglutarate/malate translocator cac1590 SWALL:Q97IQ0 (EMBL:AE007668) (476 aa) fasta scores: E(): 4.3e-79, 44.03% id in 461 aa, and to Bacillus subtilis YflS protein yflS SWALL:O34726 (EMBL:Z99108) (478 aa) fasta scores: E(): 3.1e-81, 42.46% id in 478 aa; sodium:sulfate symporter 3188245 2884988 ECA2843 Pectobacterium atrosepticum SCRI1043 sodium:sulfate symporter YP_050934.1 3186824 D 218491 CDS YP_050935.1 50121768 2884989 complement(3188336..3188503) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein yqae or b2666 or c3215 or z3965 or ecs3527 SWALL:YQAE_ECOLI (SWALL:P77240) (52 aa) fasta scores: E(): 8.5e-17, 82.69% id in 52 aa, and to Salmonella typhimurium, and Salmonella typhi yqae family transport protein yqae or stm2796 or sty2916 SWALL:Q8XF49 (EMBL:AE008827) (52 aa) fasta scores: E(): 6.7e-16, 82.35% id in 51 aa; hypothetical protein 3188503 2884989 ECA2844 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050935.1 3188336 R 218491 CDS YP_050936.1 50121769 2882048 complement(3188704..3190713) 1 NC_004547.2 Similar to Pseudomonas stutzeri NosA protein precursor NosA SWALL:Q00620 (EMBL:M60717) (683 aa) fasta scores: E(): 9.3e-150, 57.39% id in 669 aa, and to Yersinia pestis membrane receptor protein ypo0164 or y3948 SWALL:Q8ZJE5 (EMBL:AJ414141) (686 aa) fasta scores: E(): 4.6e-177, 64.46% id in 667 aa; TonB dependent receptor 3190713 nosA 2882048 nosA Pectobacterium atrosepticum SCRI1043 TonB dependent receptor YP_050936.1 3188704 R 218491 CDS YP_050937.1 50121770 2884990 complement(3190822..3191298) 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein Pa3791 SWALL:Q9HXK6 (EMBL:AE004798) (153 aa) fasta scores: E(): 3.2, 27.51% id in 149 aa; hypothetical protein 3191298 2884990 ECA2846 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050937.1 3190822 R 218491 CDS YP_050938.1 50121771 2884984 3191688..3191906 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2434 or y1902 SWALL:Q8ZDW4 (EMBL:AJ414152) (70 aa) fasta scores: E(): 4.7e-15, 67.14% id in 70 aa, and to Caulobacter crescentus hypothetical protein Cc0128 SWALL:Q9ABU2 (EMBL:AE005687) (66 aa) fasta scores: E(): 2.2e-05, 43.54% id in 62 aa; hypothetical protein 3191906 2884984 ECA2847 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050938.1 3191688 D 218491 CDS YP_050939.1 50121772 2884985 complement(3192250..3193197) 1 NC_004547.2 Similar to Yersinia pestis LysR-family transcriptional regulatory protein ypo0799 or y3187 SWALL:Q8ZHT5 (EMBL:AJ414144) (302 aa) fasta scores: E(): 1.6e-51, 45.81% id in 299 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0056 SWALL:Q9I776 (EMBL:AE004445) (306 aa) fasta scores: E(): 2.2e-53, 46.33% id in 300 aa; LysR family transcriptional regulator 3193197 2884985 ECA2848 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_050939.1 3192250 R 218491 CDS YP_050940.1 50121773 2884986 3193309..3194337 1 NC_004547.2 Similar to Xanthomonas maltophilia metallo-beta-lactamase precursor BlaS SWALL:Q9F238 (EMBL:AJ291672) (290 aa) fasta scores: E(): 9.3e-15, 29.24% id in 277 aa, and to Fluoribacter gormanii metallo-beta-lactamase Fez-1 protein blafez-1 SWALL:Q9K578 (EMBL:Y17896) (282 aa) fasta scores: E(): 7e-16, 29.04% id in 241 aa, and to Xanthomonas maltophilia metallo-beta-lactamase l1 precursor SWALL:BLA1_XANMA (SWALL:P52700) (290 aa) fasta scores: E(): 5.2e-14, 30.21% id in 235 aa; metallo-beta-lactamase 3194337 2884986 ECA2849 Pectobacterium atrosepticum SCRI1043 metallo-beta-lactamase YP_050940.1 3193309 D 218491 CDS YP_050941.1 50121774 2885198 complement(3194782..3195210) 1 NC_004547.2 Similar to Shigella flexneri, and Shigella flexneri 2a stborf2 or MvpA SWALL:O06662 (EMBL:U82621) (132 aa) fasta scores: E(): 3e-33, 69.46% id in 131 aa, and to Rhizobium meliloti ntrr protein ntrr or ntrr1 or r02418 or smc01521 SWALL:Q9L380 (EMBL:AJ277847) (134 aa) fasta scores: E(): 8e-09, 39.25% id in 135 aa; plasmid protein 3195210 mvpA 2885198 mvpA Pectobacterium atrosepticum SCRI1043 plasmid protein YP_050941.1 3194782 R 218491 CDS YP_050942.1 50121775 2885199 complement(3195210..3195440) 1 NC_004547.2 Similar to Shigella flexneri MvpT protein SWALL:CAC05863 (EMBL:AL391753) (75 aa) fasta scores: E(): 8e-18, 68.91% id in 74 aa, and to Salmonella dublin virulence-associated protein VagC SWALL:VAGC_SALDU (SWALL:Q05459) (76 aa) fasta scores: E(): 0.0048, 31.81% id in 66 aa; plasmid protein 3195440 mvpT 2885199 mvpT Pectobacterium atrosepticum SCRI1043 plasmid protein YP_050942.1 3195210 R 218491 CDS YP_050943.1 50121776 2884987 complement(3195534..3196367) 1 NC_004547.2 Similar to Shigella flexneri 2a hypothetical 32.7 kDa protein SWALL:Q9AL39 (EMBL:AF200692) (280 aa) fasta scores: E(): 5.7e-66, 59.55% id in 272 aa, and to Escherichia coli Z1226 protein z1226 SWALL:CAD33792 (EMBL:AJ488511) (281 aa) fasta scores: E(): 8.4e-69, 62.59% id in 270 aa; hypothetical protein 3196367 2884987 ECA2852 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050943.1 3195534 R 218491 CDS YP_050944.1 50121777 2884981 complement(3196485..3196805) 1 NC_004547.2 Similar to Shigella flexneri 2a hypothetical 14.0 kDa protein SWALL:Q9AL42 (EMBL:AF200692) (125 aa) fasta scores: E(): 1.5e-21, 58.65% id in 104 aa, and to Escherichia coli hypothetical protein ykfi or b0245 SWALL:YKFI_ECOLI (SWALL:P77692) (113 aa) fasta scores: E(): 1.4e-29, 72.38% id in 105 aa; hypothetical protein 3196805 2884981 ECA2853 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050944.1 3196485 R 218491 CDS YP_050945.1 50121778 2884982 complement(3196875..3197252) 1 NC_004547.2 Similar to Shigella flexneri 2a hypothetical 13.8 kDa protein SWALL:Q9AL43 (EMBL:AF200692) (126 aa) fasta scores: E(): 8.4e-25, 64.76% id in 105 aa, and to Escherichia coli hypothetical protein yeeU SWALL:CAD42100 (EMBL:AJ494981) (122 aa) fasta scores: E(): 1.3e-24, 63.46% id in 104 aa; hypothetical protein 3197252 2884982 ECA2854 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050945.1 3196875 R 218491 CDS YP_050946.1 50121779 2884983 complement(3197249..3197722) 1 NC_004547.2 Similar to Shigella flexneri intergenic-region protein yees or sf2996 SWALL:AAN44477 (EMBL:AE015313) (163 aa) fasta scores: E(): 4.9e-27, 50.65% id in 152 aa, and to Escherichia coli intergenic-region protein SWALL:Q8VRA3 (EMBL:AF447814) (163 aa) fasta scores: E(): 5.7e-27, 50.65% id in 152 aa, and to Escherichia coli DNA repair protein RadC or b3638 SWALL:RADC_ECOLI (SWALL:P25531) (222 aa) fasta scores: E(): 5.6e-23, 47.51% id in 141 aa; hypothetical protein 3197722 2884983 ECA2855 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050946.1 3197249 R 218491 CDS YP_050947.1 50121780 2884977 complement(3197845..3198195) 1 NC_004547.2 Similar to Vibrio cholerae hypothetical protein Vc0505 SWALL:Q9KUL3 (EMBL:AE004136) (122 aa) fasta scores: E(): 0.42, 27.58% id in 116 aa, and to Helicobacter pylori hypothetical protein Hp0204 SWALL:O24996 (EMBL:AE000540) (127 aa) fasta scores: E(): 2.2, 32.18% id in 87 aa; hypothetical protein 3198195 2884977 ECA2856 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050947.1 3197845 R 218491 CDS YP_050948.1 50121781 2884978 complement(3198253..3199086) 1 NC_004547.2 hypothetical protein 3199086 2884978 ECA2857 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050948.1 3198253 R 218491 CDS YP_050949.1 50121782 2884979 complement(3199216..3199407) 1 NC_004547.2 hypothetical protein 3199407 2884979 ECA2858 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050949.1 3199216 R 218491 CDS YP_050950.1 50121783 2884980 complement(3199453..3199596) 1 NC_004547.2 hypothetical protein 3199596 2884980 ECA2859 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050950.1 3199453 R 218491 CDS YP_050951.1 50121784 2884974 complement(3199575..3200462) 1 NC_004547.2 Similar to Shigella flexneri 2a hypothetical 32.4 kDa protein SWALL:Q93F04 (EMBL:AF326777) (290 aa) fasta scores: E(): 3.4e-37, 43.43% id in 297 aa, and to Escherichia coli hypothetical 32.5 kDa protein SWALL:Q8RLA4 (EMBL:AY082443) (290 aa) fasta scores: E(): 2.6e-37, 43.43% id in 297 aa; hypothetical protein 3200462 2884974 ECA2860 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050951.1 3199575 R 218491 CDS YP_050952.1 50121785 2884975 complement(3200558..3201589) 1 NC_004547.2 hypothetical protein 3201589 2884975 ECA2861 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050952.1 3200558 R 218491 CDS YP_050953.1 50121786 2884976 3202360..3202950 1 NC_004547.2 Similar to Shigella flexneri 2a hypothetical 23.4 kDa protein SWALL:Q93F37 (EMBL:AF326777) (197 aa) fasta scores: E(): 2.1e-24, 38.58% id in 184 aa, and to Escherichia coli O6 conserved hypothetical protein c1171 SWALL:AAN79639 (EMBL:AE016758) (197 aa) fasta scores: E(): 1.8e-24, 38.91% id in 185 aa; hypothetical protein 3202950 2884976 ECA2862 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050953.1 3202360 D 218491 CDS YP_050954.1 50121787 2883852 3203055..3203267 1 NC_004547.2 Similar to Shigella flexneri orf, conserved hypothetical protein AlpA or sf2987 SWALL:AAN44468 (EMBL:AE015312) (68 aa) fasta scores: E(): 3.4e-18, 78.68% id in 61 aa, and to Escherichia coli O6 conserved hypothetical protein c0306 SWALL:Q8FKT9 (EMBL:AE016755) (68 aa) fasta scores: E(): 2.4e-18, 80.32% id in 61 aa; hypothetical protein 3203267 2883852 ECA2863 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050954.1 3203055 D 218491 CDS YP_050955.1 50121788 2883853 3203360..3203785 1 NC_004547.2 Similar to Shigella flexneri 2a hypothetical 19.8 kDa protein SWALL:Q93F12 (EMBL:AF326777) (173 aa) fasta scores: E(): 2.2e-16, 41.93% id in 124 aa, and to Escherichia coli O6 hypothetical protein c2498 SWALL:AAN80954 (EMBL:AE016762) (136 aa) fasta scores: E(): 1.8e-16, 41.93% id in 124 aa; hypothetical protein 3203785 2883853 ECA2864 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050955.1 3203360 D 218491 CDS YP_050956.1 50121789 2883854 3203940..3204521 1 NC_004547.2 Similar to Shigella flexneri 2a hypothetical 24.0 kDa protein SWALL:Q93F08 (EMBL:AF326777) (202 aa) fasta scores: E(): 6.2e-12, 31.84% id in 179 aa, and to Escherichia coli O6 hypothetical protein c0305 SWALL:AAN78793 (EMBL:AE016755) (202 aa) fasta scores: E(): 7.2e-12, 32.06% id in 184 aa; hypothetical protein 3204521 2883854 ECA2865 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050956.1 3203940 D 218491 CDS YP_050957.1 50121790 2883821 3204842..3205360 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3708 or y0036 SWALL:Q8ZAT2 (EMBL:AJ414158) (172 aa) fasta scores: E(): 5.9e-59, 81.39% id in 172 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein z0266 or ecs0234 SWALL:O52671 (EMBL:AF044503) (172 aa) fasta scores: E(): 1.6e-56, 79.65% id in 172 aa. The Yersinia pestis orthologue of this gene is described as a hemolysin co-regulated protein. Also similar to ECA3428 (95.349% identity in 172aa overlap) and ECA4275 (94.767% identity in 172aa overlap).; hypothetical protein 3205360 2883821 ECA2866 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050957.1 3204842 D 218491 CDS YP_050958.1 50121791 2882788 3205452..3207311 1 NC_004547.2 Similar to Photorhabdus luminescens VgrG SWALL:AAN64196 (EMBL:AY144117) (631 aa) fasta scores: E(): 2.8e-128, 53.96% id in 606 aa, and to Yersinia pestis RHS accessory genetic element ypo3606 or y0268 SWALL:Q8ZB23 (EMBL:AJ414158) (800 aa) fasta scores: E(): 1.7e-123, 51.18% id in 633 aa; RHS accessory genetic element 3207311 vgrG 2882788 vgrG Pectobacterium atrosepticum SCRI1043 RHS accessory genetic element YP_050958.1 3205452 D 218491 CDS YP_050959.1 50121792 2883822 3207340..3207783 1 NC_004547.2 Similar to Photorhabdus luminescens Orf5 SWALL:AAN64197 (EMBL:AY144117) (139 aa) fasta scores: E(): 7.5e-27, 54.81% id in 135 aa, and to Escherichia coli O157:H7 hypothetical protein z0706 or ecs0606 SWALL:Q8XBY6 (EMBL:AE005236) (153 aa) fasta scores: E(): 9.4e-16, 39% id in 141 aa; hypothetical protein 3207783 2883822 ECA2868 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050959.1 3207340 D 218491 CDS YP_050960.1 50121793 2884684 3207776..3212035 1 NC_004547.2 Similar to Photorhabdus luminescens Rhs Rhs-corE SWALL:AAN64198 (EMBL:AY144117) (1469 aa) fasta scores: E(): 3.1e-128, 41.64% id in 1395 aa, and to Ralstonia solanacearum RHS-related transmembrane protein rsp1137 or rs05482 SWALL:Q8XQT2 (EMBL:AL646083) (1517 aa) fasta scores: E(): 3e-74, 32.03% id in 1330 aa; RHS protein 3212035 rhs 2884684 rhs Pectobacterium atrosepticum SCRI1043 RHS protein YP_050960.1 3207776 D 218491 CDS YP_050961.1 50121794 2883823 3212038..3212454 1 NC_004547.2 hypothetical protein 3212454 2883823 ECA2870 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050961.1 3212038 D 218491 CDS YP_050962.1 50121795 2883824 complement(3212530..3212853) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3611 or y0263 SWALL:AAM83857 (EMBL:AJ414158) (63 aa) fasta scores: E(): 0.016, 51.35% id in 37 aa; hypothetical protein 3212853 2883824 ECA2871 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050962.1 3212530 R 218491 CDS YP_050963.1 50121796 2883614 3213661..3215115 1 NC_004547.2 Similar to Salmonella rubislaw flagellin FliC or FlaF or Hag SWALL:FLIC_SALRU (SWALL:P06175) (492 aa) fasta scores: E(): 6.3e-28, 34% id in 497 aa, and to Escherichia coli flagellin SWALL:Q93ES4 (EMBL:AF345848) (487 aa) fasta scores: E(): 1.9e-30, 34.86% id in 499 aa; flagellin 3215115 2883614 ECA2872 Pectobacterium atrosepticum SCRI1043 flagellin YP_050963.1 3213661 D 218491 CDS YP_050964.1 50121797 2883615 3215245..3215712 1 NC_004547.2 Similar to Salmonella typhimurium colanic acid capsular biosynthesis activation protein A RcsA or stm1982 SWALL:RCSA_SALTY (SWALL:P54698) (207 aa) fasta scores: E(): 1, 25.66% id in 113 aa, and to Citrobacter freundii transcriptional regulatory protein EcnR SWALL:ECNR_CITFR (SWALL:O69280) (199 aa) fasta scores: E(): 0.0024, 30.09% id in 103 aa; transcriptional regulator 3215712 2883615 ECA2873 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_050964.1 3215245 D 218491 CDS YP_050965.1 50121798 2883616 3216324..3217214 1 NC_004547.2 Similar to Fusobacterium nucleatum hypothetical protein Fn0445 SWALL:Q8RG72 (EMBL:AE010556) (292 aa) fasta scores: E(): 1.3e-13, 27.55% id in 294 aa; hypothetical protein 3217214 2883616 ECA2874 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050965.1 3216324 D 218491 CDS YP_050966.1 50121799 2883599 3217207..3220539 1 NC_004547.2 ATP-binding protein 3220539 2883599 ECA2875 Pectobacterium atrosepticum SCRI1043 ATP-binding protein YP_050966.1 3217207 D 218491 CDS YP_050967.1 50121800 2883600 3220532..3221371 1 NC_004547.2 Similar to Xylella fastidiosa phage-related protein xf1763 SWALL:Q9PCL5 (EMBL:AE003998) (280 aa) fasta scores: E(): 7.8e-05, 26.69% id in 221 aa, and to Xanthomonas axonopodis phage-related protein orf84 or xac2285 SWALL:Q8PK90 (EMBL:AE011865) (320 aa) fasta scores: E(): 0.0092, 25.07% id in 327 aa; phage-like protein 3221371 2883600 ECA2876 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_050967.1 3220532 D 218491 CDS YP_050968.1 50121801 2883601 complement(3221522..3223375) 1 NC_004547.2 hypothetical protein 3223375 2883601 ECA2877 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050968.1 3221522 R 218491 CDS YP_050969.1 50121802 2883602 complement(3223378..3225771) 1 NC_004547.2 Similar to the C-terminal regions of many including Pseudomonas aeruginosa sensor protein PilS or pa4546 SWALL:PILS_PSEAE (SWALL:P33639) (530 aa) fasta scores: E(): 2.3e-07, 27.48% id in 262 aa, and to Myxococcus xanthus AsgA asga476 SWALL:Q50853 (EMBL:U20214) (385 aa) fasta scores: E(): 1.1e-05, 27.9% id in 301 aa; signal transduction protein 3225771 2883602 ECA2878 Pectobacterium atrosepticum SCRI1043 signal transduction protein YP_050969.1 3223378 R 218491 CDS YP_050970.1 50121803 2883572 complement(3226143..3227396) 1 NC_004547.2 Similar to Yersinia pestis prophage P4 integrase IntB or y0749 SWALL:AAM84336 (EMBL:AE013677) (431 aa) fasta scores: E(): 1.7e-120, 72.53% id in 415 aa, and to Shigella flexneri Int or sf2964 SWALL:AAN44445 (EMBL:AE015309) (420 aa) fasta scores: E(): 3.5e-112, 67.95% id in 415 aa; integrase 3227396 2883572 ECA2879 Pectobacterium atrosepticum SCRI1043 integrase YP_050970.1 3226143 R 218491 CDS YP_050971.1 50121804 2884540 complement(3228035..3228583) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase PgsA or b1912 or c2325 or z3000 or ecs2650 SWALL:PGSA_ECOLI (SWALL:P06978) (181 aa) fasta scores: E(): 4.1e-57, 79.44% id in 180 aa; phosphatidylglycerophosphate synthetase 3228583 pgsA 2884540 pgsA Pectobacterium atrosepticum SCRI1043 phosphatidylglycerophosphate synthetase YP_050971.1 3228035 R 218491 CDS YP_050972.1 50121805 2882766 complement(3228642..3230474) 1 NC_004547.2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 3230474 uvrC 2882766 uvrC Pectobacterium atrosepticum SCRI1043 excinuclease ABC subunit C YP_050972.1 3228642 R 218491 CDS YP_050973.1 50121806 2884751 complement(3230467..3231123) 1 NC_004547.2 in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; response regulator 3231123 expA 2884751 expA Pectobacterium atrosepticum SCRI1043 response regulator YP_050973.1 3230467 R 218491 CDS YP_050974.1 50121807 2883573 3231768..3231992 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo1864 SWALL:Q8ZF54 (EMBL:AJ414150) (74 aa) fasta scores: E(): 2.3e-16, 67.56% id in 74 aa, and to Salmonella typhimurium, and Salmonella typhi cytoplasmic protein yecf or stm1949 or sty2157 SWALL:Q8XEK4 (EMBL:AE008786) (74 aa) fasta scores: E(): 7.4e-16, 62.16% id in 74 aa; hypothetical protein 3231992 2883573 ECA2883 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050974.1 3231768 D 218491 CDS YP_050975.1 50121808 2883574 complement(3232086..3232373) 1 NC_004547.2 hypothetical protein 3232373 2883574 ECA2884 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050975.1 3232086 R 218491 CDS YP_050976.1 50121809 2883098 3233243..3234655 1 NC_004547.2 involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine; D-alanine/D-serine/glycine permease 3234655 cycA 2883098 cycA Pectobacterium atrosepticum SCRI1043 D-alanine/D-serine/glycine permease YP_050976.1 3233243 D 218491 CDS YP_050977.1 50121810 2883470 complement(3234825..3235091) 1 NC_004547.2 Similar to Escherichia fergusonii hypothetical protein YaiB SWALL:YAIB_ESCFE (SWALL:P28243) (86 aa) fasta scores: E(): 0.025, 38.59% id in 57 aa, and to Salmonella typhimurium, and Salmonella typhi cytoplasmic protein yaib or stm0383 or sty0415 SWALL:Q8XG49 (EMBL:AE008713) (88 aa) fasta scores: E(): 0.04, 31.76% id in 85 aa; hypothetical protein 3235091 2883470 ECA2886 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050977.1 3234825 R 218491 CDS YP_050978.1 50121811 2883471 complement(3235088..3235258) 1 NC_004547.2 hypothetical protein 3235258 2883471 ECA2887 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050978.1 3235088 R 218491 CDS YP_050979.1 50121812 2885200 complement(3235472..>3235747) 1 NC_004547.2 Partial CDS. Similar to the N-terminal region of Escherichia coli nitrogen assimilation regulatory protein Nac or b1988 SWALL:NAC_ECOLI (SWALL:Q47005) (305 aa) fasta scores: E(): 1.4e-23, 77.77% id in 90 aa; nitrogen assimilation regulatory protein (partial) >3235747 nac 2885200 nac Pectobacterium atrosepticum SCRI1043 nitrogen assimilation regulatory protein (partial) YP_050979.1 3235472 R 218491 CDS YP_050980.1 50121813 2881466 3236381..3237667 1 NC_004547.2 Similar to Yersinia pestis integrase IntB or ypo3438 SWALL:Q8ZBH6 (EMBL:AJ414157) (419 aa) fasta scores: E(): 6.6e-96, 56.5% id in 423 aa, and to Shigella flexneri integrase IntB or sf4224 SWALL:AAN45643 (EMBL:AE015430) (415 aa) fasta scores: E(): 3.7e-90, 57.46% id in 402 aa; integrase 3237667 intB 2881466 intB Pectobacterium atrosepticum SCRI1043 integrase YP_050980.1 3236381 D 218491 CDS YP_050981.1 50121814 2883472 3237701..3238219 1 NC_004547.2 hypothetical protein 3238219 2883472 ECA2890 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050981.1 3237701 D 218491 CDS YP_050982.1 50121815 2883439 complement(3238280..3239092) 1 NC_004547.2 Similar to Escherichia coli, and Salmonella typhimurium yebb protein yebb or ydjA SWALL:Q9JMR6 (EMBL:AP001918) (299 aa) fasta scores: E(): 6.9e-19, 42.69% id in 178 aa, and to Vibrio vulnificus predicted nucleotide-binding protein vv12473 SWALL:AAO10837 (EMBL:AE016805) (299 aa) fasta scores: E(): 7.4e-27, 48.2% id in 195 aa; hypothetical protein 3239092 2883439 ECA2891 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050982.1 3238280 R 218491 CDS YP_050983.1 50121816 2883440 complement(3239133..3239936) 1 NC_004547.2 Weakly similar to Deinococcus radiodurans hypothetical protein Dra0366 dra0366 SWALL:Q9RYF2 (EMBL:AE001863) (172 aa) fasta scores: E(): 3e-05, 39.62% id in 106 aa, and to Streptococcus mutans hypothetical protein smu.804 SWALL:AAN58522 (EMBL:AE014921) (404 aa) fasta scores: E(): 0.68, 26.45% id in 155 aa; hypothetical protein 3239936 2883440 ECA2892 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050983.1 3239133 R 218491 CDS YP_050984.1 50121817 2881907 3241130..3241531 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 DNA-binding protein h-ns SWALL:HNS_ECOLI (SWALL:P08936) (136 aa) fasta scores: E(): 4.1e-23, 62.68% id in 134 aa, and to Erwinia chrysanthemi Hns regulatory protein hnS SWALL:O53007 (EMBL:X89444) (135 aa) fasta scores: E(): 3.1e-23, 63.15% id in 133 aa. Also similar to ECA1665 (87.970% id in 133 aa overlap) and to ECA2328 (62.406% id in 133 aa overlap); DNA-binding protein Hns 3241531 hns3 2881907 hns3 Pectobacterium atrosepticum SCRI1043 DNA-binding protein Hns YP_050984.1 3241130 D 218491 CDS YP_050985.1 50121818 2883441 complement(3241658..3242011) 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c2396 SWALL:Q8FGI1 (EMBL:AE016762) (104 aa) fasta scores: E(): 1e-09, 48% id in 100 aa, and to Bacteroides nodosus mobilisation protein C MobC SWALL:Q9EXQ0 (EMBL:Y19120) (99 aa) fasta scores: E(): 2.5, 36.2% id in 58 aa; plasmid-like protein 3242011 2883441 ECA2894 Pectobacterium atrosepticum SCRI1043 plasmid-like protein YP_050985.1 3241658 R 218491 CDS YP_050986.1 50121819 2883442 complement(3242011..3242289) 1 NC_004547.2 hypothetical protein 3242289 2883442 ECA2895 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050986.1 3242011 R 218491 CDS YP_050987.1 50121820 2883166 3242492..3242674 1 NC_004547.2 Similar to Methanosarcina mazei conserved protein mm3163 SWALL:Q8PSB8 (EMBL:AE013574) (53 aa) fasta scores: E(): 4.5e-05, 44.44% id in 54 aa; hypothetical protein 3242674 2883166 ECA2896 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050987.1 3242492 D 218491 CDS YP_050988.1 50121821 2883167 complement(3242708..3242992) 1 NC_004547.2 Similar to Bradyrhizobium japonicum Bsl8315 protein bsl8315 SWALL:BAC53580 (EMBL:AP005965) (98 aa) fasta scores: E(): 5e-16, 53.26% id in 92 aa, and to Bradyrhizobium japonicum Bsr8247 protein bsr8247 SWALL:BAC53512 (EMBL:AP005965) (94 aa) fasta scores: E(): 5.3e-14, 49.43% id in 89 aa; hypothetical protein 3242992 2883167 ECA2897 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050988.1 3242708 R 218491 CDS YP_050989.1 50121822 2883168 3243722..3245125 1 NC_004547.2 Similar to Xanthomonas axonopodis plasmid mobilization protein MobL or xac3260 SWALL:Q8PHJ4 (EMBL:AE011971) (530 aa) fasta scores: E(): 4.1e-17, 32.84% id in 274 aa, and to Rhizobium loti probable conjugal transfer protein, TraA mll0964 SWALL:Q98LM6 (EMBL:AP002996) (1015 aa) fasta scores: E(): 1.6e-21, 36.1% id in 277 aa, and to Staphylococcus aureus orit nickase NeS neS SWALL:O87361 (EMBL:AF051917) (665 aa) fasta scores: E(): 2.4e-16, 33.99% id in 203 aa; plasmid mobilization protein 3245125 2883168 ECA2898 Pectobacterium atrosepticum SCRI1043 plasmid mobilization protein YP_050989.1 3243722 D 218491 CDS YP_050990.1 50121823 2883101 3245208..3246110 1 NC_004547.2 Weakly similar to Sulfolobus tokodaii hypothetical protein St0486 SWALL:Q975C2 (EMBL:AP000982) (268 aa) fasta scores: E(): 0.37, 28.5% id in 214 aa, and to Fusobacterium nucleatum magnesium and cobalt transport protein cora fn0332 SWALL:Q8RGG6 (EMBL:AE010545) (351 aa) fasta scores: E(): 3.3, 25.09% id in 263 aa; hypothetical protein 3246110 2883101 ECA2899 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050990.1 3245208 D 218491 CDS YP_050991.1 50121824 2883102 complement(3246456..3247238) 1 NC_004547.2 hypothetical protein 3247238 2883102 ECA2900 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050991.1 3246456 R 218491 CDS YP_050992.1 50121825 2883103 3248045..3248488 1 NC_004547.2 hypothetical protein 3248488 2883103 ECA2901 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050992.1 3248045 D 218491 CDS YP_050993.1 50121826 2883104 3248552..3248980 1 NC_004547.2 hypothetical protein 3248980 2883104 ECA2902 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050993.1 3248552 D 218491 CDS YP_050994.1 50121827 2883017 complement(3249069..3249716) 1 NC_004547.2 hypothetical protein 3249716 2883017 ECA2903 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050994.1 3249069 R 218491 CDS YP_050995.1 50121828 2883018 complement(3249733..3250287) 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c2401 SWALL:Q8FGH6 (EMBL:AE016762) (191 aa) fasta scores: E(): 1.1e-32, 51.63% id in 184 aa; lipoprotein 3250287 2883018 ECA2904 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_050995.1 3249733 R 218491 CDS YP_050996.1 50121829 2883019 3250922..3251299 1 NC_004547.2 Similar to Escherichia coli O157:H7 z3937 protein z3937 or ecs3506 SWALL:Q8X978 (EMBL:AE005493) (131 aa) fasta scores: E(): 1.4e-16, 42.24% id in 116 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0042 pa0042 SWALL:Q9I790 (EMBL:AE004444) (131 aa) fasta scores: E(): 4.9, 27.64% id in 123 aa; hypothetical protein 3251299 2883019 ECA2905 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050996.1 3250922 D 218491 CDS YP_050997.1 50121830 2885629 complement(3251567..3252769) 1 NC_004547.2 Similar to Anabaena sp. hypothetical protein All3975 SWALL:Q8YQ60 (EMBL:AP003594) (403 aa) fasta scores: E(): 0.2, 22.5% id in 280 aa, and to Pseudomonas putida hypothetical protein pp2277 SWALL:AAN67890 (EMBL:AE016782) (461 aa) fasta scores: E(): 0.7, 22.09% id in 448 aa; hypothetical protein 3252769 2885629 ECA2906 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050997.1 3251567 R 218491 CDS YP_050998.1 50121831 2885630 complement(3253051..3253389) 1 NC_004547.2 hypothetical protein 3253389 2885630 ECA2907 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_050998.1 3253051 R 218491 CDS YP_050999.1 50121832 2885631 complement(3253486..3254250) 1 NC_004547.2 Similar to Pseudoalteromonas sp. PS1M3 RePlication protein Rep SWALL:Q9LCJ6 (EMBL:AB022096) (193 aa) fasta scores: E(): 3.5e-11, 33.52% id in 173 aa, and to Zymomonas mobilis 20.9 kDa protein SWALL:21KD_ZYMMO (SWALL:P15256) (184 aa) fasta scores: E(): 1.8e-12, 32.55% id in 172 aa, and to Bacteroides fragilis RepA SWALL:Q45126 (EMBL:U30316) (226 aa) fasta scores: E(): 7.8e-09, 31.51% id in 165 aa; plasmid replication protein 3254250 2885631 ECA2908 Pectobacterium atrosepticum SCRI1043 plasmid replication protein YP_050999.1 3253486 R 218491 CDS YP_051000.1 50121833 2882846 complement(3255302..3255463) 1 NC_004547.2 hypothetical protein 3255463 2882846 ECA2909 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051000.1 3255302 R 218491 CDS YP_051001.1 50121834 2882847 3255834..3256568 1 NC_004547.2 Similar to Ruminobacter amylophilus replication protein Rep A SWALL:Q9ZN68 (EMBL:AB022866) (129 aa) fasta scores: E(): 0.00038, 31.68% id in 101 aa; plasmid replication protein 3256568 2882847 ECA2910 Pectobacterium atrosepticum SCRI1043 plasmid replication protein YP_051001.1 3255834 D 218491 CDS YP_051002.1 50121835 2882848 complement(3256754..3257866) 1 NC_004547.2 Similar to Corynebacterium efficiens transcription regulator ce1210 SWALL:BAC18020 (EMBL:AP005218) (378 aa) fasta scores: E(): 6.6e-43, 38.29% id in 376 aa, and to Neisseria meningitidis transcriptional regulator, hth_3 family nmb2012 SWALL:Q9JXJ6 (EMBL:AE002551) (363 aa) fasta scores: E(): 1.5e-30, 39.37% id in 353 aa; DNA-binding protein 3257866 2882848 ECA2911 Pectobacterium atrosepticum SCRI1043 DNA-binding protein YP_051002.1 3256754 R 218491 CDS YP_051003.1 50121836 2882849 complement(3257876..3258616) 1 NC_004547.2 Similar to Brucella suis replication protein RepB bra1203 SWALL:Q8FUL8 (EMBL:AE014612) (328 aa) fasta scores: E(): 3.7, 24.3% id in 251 aa; plasmid-like protein 3258616 2882849 ECA2912 Pectobacterium atrosepticum SCRI1043 plasmid-like protein YP_051003.1 3257876 R 218491 CDS YP_051004.1 50121837 2882747 complement(3258798..3259049) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri DNA-binding protein StpA or HnsB or b2669 or z3968 or ecs3530 or sf2697 SWALL:STPA_ECOLI (SWALL:P30017) (134 aa) fasta scores: E(): 0.0029, 42.18% id in 64 aa, and to Escherichia coli O6 hypothetical protein c2413 SWALL:Q8FGG4 (EMBL:AE016762) (80 aa) fasta scores: E(): 2.7e-18, 78.2% id in 78 aa; DNA-binding protein 3259049 2882747 ECA2913 Pectobacterium atrosepticum SCRI1043 DNA-binding protein YP_051004.1 3258798 R 218491 CDS YP_051005.1 50121838 2882748 complement(3259117..3259467) 1 NC_004547.2 hypothetical protein 3259467 2882748 ECA2914 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051005.1 3259117 R 218491 CDS YP_051006.1 50121839 2882749 complement(3259507..3259770) 1 NC_004547.2 hypothetical protein 3259770 2882749 ECA2915 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051006.1 3259507 R 218491 CDS YP_051007.1 50121840 2885488 complement(3259824..3260120) 1 NC_004547.2 hypothetical protein 3260120 2885488 ECA2916 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051007.1 3259824 R 218491 CDS YP_051008.1 50121841 2885489 complement(3260200..3260514) 1 NC_004547.2 hypothetical protein 3260514 2885489 ECA2917 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051008.1 3260200 R 218491 CDS YP_051009.1 50121842 2885490 complement(3260547..3260765) 1 NC_004547.2 Similar to Bacteriophage P4 hypothetical 9.7 kDa protein SWALL:Y9K_BPP4 (SWALL:P12552) (88 aa) fasta scores: E(): 5.4e-05, 42.3% id in 52 aa, and to Yersinia pseudotuberculosis DNA-binding protein SWALL:Q9X9G5 (EMBL:AJ236887) (61 aa) fasta scores: E(): 1.5e-06, 45.45% id in 55 aa; phage-like protein 3260765 2885490 ECA2918 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_051009.1 3260547 R 218491 CDS YP_051010.1 50121843 2885491 complement(3260915..3261778) 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein t0869 SWALL:AAO68551 (EMBL:AE016837) (287 aa) fasta scores: E(): 8.5e-72, 70% id in 280 aa; hypothetical protein 3261778 2885491 ECA2919 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051010.1 3260915 R 218491 CDS YP_051011.1 50121844 2882314 complement(3261771..3261941) 1 NC_004547.2 hypothetical protein 3261941 2882314 ECA2920 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051011.1 3261771 R 218491 CDS YP_051012.1 50121845 2882315 complement(3262080..3263492) 1 NC_004547.2 hypothetical protein 3263492 2882315 ECA2921 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051012.1 3262080 R 218491 CDS YP_051013.1 50121846 2882316 complement(3264767..3265660) 1 NC_004547.2 Similar to Escherichia coli hypothetical transcriptional regulator ycjz or b1328 SWALL:YCJZ_ECOLI (SWALL:P77333) (299 aa) fasta scores: E(): 1e-73, 66.21% id in 296 aa, and to Bradyrhizobium japonicum transcriptional regulatory protein blr5548 SWALL:BAC50813 (EMBL:AP005955) (297 aa) fasta scores: E(): 1.3e-54, 54.39% id in 296 aa; LysR family transcriptional regulator 3265660 2882316 ECA2922 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_051013.1 3264767 R 218491 CDS YP_051014.1 50121847 2882452 3265816..3266967 1 NC_004547.2 Similar to Escherichia coli O157:H7 oxidoreductase z0369 or ecs0331 SWALL:Q8X6H2 (EMBL:AE005207) (380 aa) fasta scores: E(): 1.5e-79, 58.44% id in 373 aa, and to Oceanobacillus iheyensis NADH-dependent flavin oxidoreductase ob3315 SWALL:BAC15271 (EMBL:AP004604) (373 aa) fasta scores: E(): 3.6e-62, 47.97% id in 371 aa; NADH:flavin oxidoreductase 3266967 2882452 ECA2923 Pectobacterium atrosepticum SCRI1043 NADH:flavin oxidoreductase YP_051014.1 3265816 D 218491 CDS YP_051015.1 50121848 2882453 3267167..3267820 1 NC_004547.2 lipoprotein 3267820 2882453 ECA2924 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_051015.1 3267167 D 218491 CDS YP_051016.1 50121849 2882454 3268214..3268972 1 NC_004547.2 Similar to Ralstonia solanacearum probable dehydrogenase/reductase oxidoreductase protein rsc2597 or rs00845 SWALL:Q8XW78 (EMBL:AL646070) (252 aa) fasta scores: E(): 1.8e-81, 88.09% id in 252 aa, and to Bradyrhizobium japonicum Blr4183 protein blr4183 SWALL:BAC49448 (EMBL:AP005950) (254 aa) fasta scores: E(): 5e-42, 49.18% id in 246 aa; short chain dehydrogenase 3268972 2882454 ECA2925 Pectobacterium atrosepticum SCRI1043 short chain dehydrogenase YP_051016.1 3268214 D 218491 CDS YP_051017.1 50121850 2885468 <3269020..3269145 1 NC_004547.2 Partial CDS. Similar to the N-terminal region of Ralstonia solanacearum probable glutathione-s-transferase protein rsc2594 or rs00842 SWALL:Q8XW81 (EMBL:AL646070) (224 aa) fasta scores: E(): 0.00015, 69.44% id in 36 aa, and to Rhizobium meliloti glutathione s-transferase protein gst3 or r00303 or smc00383 SWALL:Q92SR2 (EMBL:AL591783) (228 aa) fasta scores: E(): 0.012, 57.14% id in 35 aa; glutathione-S-transferase (partial) 3269145 2885468 ECA2926 Pectobacterium atrosepticum SCRI1043 glutathione-S-transferase (partial) YP_051017.1 <3269020 D 218491 CDS YP_051018.1 50121851 2885469 complement(3269197..3270420) 1 NC_004547.2 Similar to Escherichia coli bicyclomycin resistance protein Bcr or BicA or BicR or Sur or SuxA or b2182 SWALL:BCR_ECOLI (SWALL:P28246) (396 aa) fasta scores: E(): 2.1e-29, 30.52% id in 380 aa, and to Pseudomonas putida multidrug resistance transporter, bcr/cfla family pp3304 SWALL:AAN68911 (EMBL:AE016786) (412 aa) fasta scores: E(): 3.5e-93, 65.33% id in 401 aa; transporter 3270420 2885469 ECA2927 Pectobacterium atrosepticum SCRI1043 transporter YP_051018.1 3269197 R 218491 CDS YP_051019.1 50121852 2885470 complement(3270545..3271834) 1 NC_004547.2 FabF, beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP.; 3-oxoacyl-ACP synthase 3271834 2885470 ECA2928 Pectobacterium atrosepticum SCRI1043 3-oxoacyl-ACP synthase YP_051019.1 3270545 R 218491 CDS YP_051020.1 50121853 2885471 complement(3271911..3275000) 1 NC_004547.2 Similar to Pseudomonas putida rnd efflux transporter pp3302 SWALL:AAN68909 (EMBL:AE016786) (1030 aa) fasta scores: E(): 0, 84.11% id in 1020 aa, and to Xylella fastidiosa cation efflux system protein xf2083 SWALL:Q9PBQ7 (EMBL:AE004023) (1020 aa) fasta scores: E(): 0, 83.38% id in 1017 aa; efflux protein 3275000 2885471 ECA2929 Pectobacterium atrosepticum SCRI1043 efflux protein YP_051020.1 3271911 R 218491 CDS YP_051021.1 50121854 2881499 complement(3274997..3276106) 1 NC_004547.2 Similar to Pseudomonas putida RND efflux membrane fusion protein pp3301 SWALL:AAN68908 (EMBL:AE016786) (367 aa) fasta scores: E(): 2.8e-81, 70.1% id in 368 aa, and to Xylella fastidiosa component of multidrug efflux system xf2084 SWALL:Q9PBQ6 (EMBL:AE004023) (368 aa) fasta scores: E(): 3.9e-75, 63.95% id in 369 aa; HlyD family secretion protein 3276106 2881499 ECA2930 Pectobacterium atrosepticum SCRI1043 HlyD family secretion protein YP_051021.1 3274997 R 218491 CDS YP_051022.1 50121855 2881500 complement(3276183..3276797) 1 NC_004547.2 Similar to Pseudomonas putida transcriptional regulator, TetR family pp3300 SWALL:AAN68907 (EMBL:AE016786) (204 aa) fasta scores: E(): 4.3e-53, 65.19% id in 204 aa, and to Xylella fastidiosa transcriptional regulator xf2085 SWALL:Q9PBQ5 (EMBL:AE004024) (205 aa) fasta scores: E(): 1.8e-50, 64.87% id in 205 aa; TetR family transcriptional regulator 3276797 2881500 ECA2931 Pectobacterium atrosepticum SCRI1043 TetR family transcriptional regulator YP_051022.1 3276183 R 218491 CDS YP_051023.1 50121856 2881501 3276884..3278356 1 NC_004547.2 Similar to Ralstonia solanacearum drug efflux lipoprotein rsc3208 or rs02424 SWALL:Q8XUI0 (EMBL:AL646074) (486 aa) fasta scores: E(): 4e-119, 69.19% id in 487 aa, and to Xanthomonas campestris outer membrane protein oprn or xcc0419 SWALL:Q8PDC1 (EMBL:AE012139) (490 aa) fasta scores: E(): 9.1e-110, 65.09% id in 487 aa; outer membrane efflux lipoprotein 3278356 2881501 ECA2932 Pectobacterium atrosepticum SCRI1043 outer membrane efflux lipoprotein YP_051023.1 3276884 D 218491 CDS YP_051024.1 50121857 2881680 3278435..3279220 1 NC_004547.2 Similar to Agrobacterium tumefaciens short-chain dehydrogenase atu4220 or agr_l_1280 SWALL:Q8U879 (EMBL:AE009351) (291 aa) fasta scores: E(): 8.4e-41, 46.8% id in 250 aa, and to Pseudomonas aeruginosa probable short-chain dehydrogenase pa0658 SWALL:Q9I5R3 (EMBL:AE004500) (266 aa) fasta scores: E(): 8.5e-26, 37.3% id in 252 aa; short-chain dehydrogenase 3279220 2881680 ECA2933 Pectobacterium atrosepticum SCRI1043 short-chain dehydrogenase YP_051024.1 3278435 D 218491 CDS YP_051025.1 50121858 2881681 complement(3279353..3279733) 1 NC_004547.2 Similar to Rhizobium loti hypothetical protein Mll3985 SWALL:Q98F15 (EMBL:AP003003) (137 aa) fasta scores: E(): 3e-18, 51.32% id in 113 aa, and to Xanthomonas campestris hypothetical protein Xcc0062 SWALL:Q8PEB9 (EMBL:AE012100) (116 aa) fasta scores: E(): 1.5e-16, 49.51% id in 103 aa; transcriptional regulator 3279733 2881681 ECA2934 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_051025.1 3279353 R 218491 CDS YP_051026.1 50121859 2881682 3279845..3280585 1 NC_004547.2 Similar to Xanthomonas campestris hypothetical protein Xcc1216 SWALL:Q8PBA7 (EMBL:AE012221) (244 aa) fasta scores: E(): 8.1e-40, 50.4% id in 248 aa, and to Streptomyces coelicolor hypothetical protein sco5465 or sc3d11.22 SWALL:Q9L1E0 (EMBL:AL939123) (220 aa) fasta scores: E(): 8.7e-33, 45.57% id in 226 aa; hypothetical protein 3280585 2881682 ECA2935 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051026.1 3279845 D 218491 CDS YP_051027.1 50121860 2882068 complement(3280604..3281122) 1 NC_004547.2 Similar to Pantoea agglomerans NifQ protein NifQ SWALL:Q52074 (EMBL:X99694) (171 aa) fasta scores: E(): 1.7e-37, 59.64% id in 171 aa, and to Klebsiella pneumoniae NifQ protein NifQ SWALL:NIFQ_KLEPN (SWALL:P10392) (167 aa) fasta scores: E(): 1.8e-33, 58.08% id in 167 aa; nitrogen fixation protein 3281122 nifQ 2882068 nifQ Pectobacterium atrosepticum SCRI1043 nitrogen fixation protein YP_051027.1 3280604 R 218491 CDS YP_051028.1 50121861 2882410 complement(3281119..3282525) 1 NC_004547.2 Similar to Klebsiella pneumoniae femo cofactor biosynthesis protein NifB SWALL:NIFB_KLEPN (SWALL:P10390) (468 aa) fasta scores: E(): 8.2e-132, 70.08% id in 468 aa, and to Pantoea agglomerans NifB protein NifB SWALL:Q57037 (EMBL:X99694) (465 aa) fasta scores: E(): 1e-124, 69.02% id in 452 aa; femo cofactor biosynthesis protein 3282525 nifB 2882410 nifB Pectobacterium atrosepticum SCRI1043 femo cofactor biosynthesis protein YP_051028.1 3281119 R 218491 CDS YP_051029.1 50121862 2882409 complement(3282703..3284277) 1 NC_004547.2 Similar to Klebsiella pneumoniae nif-specific regulatory protein NifA SWALL:NIFA_KLEPN (SWALL:P03027) (524 aa) fasta scores: E(): 3.2e-156, 77.37% id in 526 aa, and to Enterobacter agglomerans nif-specific regulatory protein NifA SWALL:NIFA_ENTAG (SWALL:P54930) (518 aa) fasta scores: E(): 4.3e-144, 71.59% id in 528 aa; nif-specific regulatory protein 3284277 nifA 2882409 nifA Pectobacterium atrosepticum SCRI1043 nif-specific regulatory protein YP_051029.1 3282703 R 218491 CDS YP_051030.1 50121863 2882065 complement(3284274..3285761) 1 NC_004547.2 Similar to Klebsiella pneumoniae nitrogen fixation regulatory protein NifL SWALL:NIFL_KLEPN (SWALL:P06772) (495 aa) fasta scores: E(): 2e-130, 66.46% id in 495 aa, and to Pantoea agglomerans NifL protein NifL SWALL:Q57340 (EMBL:X99694) (495 aa) fasta scores: E(): 5.8e-122, 61.21% id in 495 aa; nitrogen fixation regulatory protein 3285761 nifL 2882065 nifL Pectobacterium atrosepticum SCRI1043 nitrogen fixation regulatory protein YP_051030.1 3284274 R 218491 CDS YP_051031.1 50121864 2881930 3286145..3286675 1 NC_004547.2 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA 3286675 nifF 2881930 nifF Pectobacterium atrosepticum SCRI1043 flavodoxin FldA YP_051031.1 3286145 D 218491 CDS YP_051032.1 50121865 2882066 complement(3286909..3287706) 1 NC_004547.2 Similar to Klebsiella pneumoniae protein NifM SWALL:NIFM_KLEPN (SWALL:P08534) (266 aa) fasta scores: E(): 2.1e-38, 43.82% id in 267 aa, and to Pantoea agglomerans NifM protein NifM SWALL:Q52073 (EMBL:X99694) (264 aa) fasta scores: E(): 7.7e-36, 40.54% id in 259 aa; nitrogen fixation protein 3287706 nifM 2882066 nifM Pectobacterium atrosepticum SCRI1043 nitrogen fixation protein YP_051032.1 3286909 R 218491 CDS YP_051033.1 50121866 2881751 complement(3287706..3288149) 1 NC_004547.2 Similar to Klebsiella pneumoniae NifZ protein NifZ SWALL:NIFZ_KLEPN (SWALL:P08533) (148 aa) fasta scores: E(): 3.6e-33, 57.24% id in 145 aa, and to Pantoea agglomerans NifZ protein NifZ SWALL:Q52072 (EMBL:X99694) (147 aa) fasta scores: E(): 5.6e-30, 56.55% id in 145 aa; nitrogen fixation protein 3288149 nifZ 2881751 nifZ Pectobacterium atrosepticum SCRI1043 nitrogen fixation protein YP_051033.1 3287706 R 218491 CDS YP_051034.1 50121867 2881730 complement(3288146..3288403) 1 NC_004547.2 Similar to Klebsiella pneumoniae nitrogenase stabilizing/protective protein NifW SWALL:NIFW_KLEPN (SWALL:P09137) (86 aa) fasta scores: E(): 4.7e-19, 70.13% id in 77 aa, and to Enterobacter agglomerans nitrogenase stabilizing/protective protein NifW SWALL:NIFW_ENTAG (SWALL:Q52071) (112 aa) fasta scores: E(): 2.5e-12, 53.84% id in 78 aa; nitrogenase stabilizing/protective protein 3288403 nifW 2881730 nifW Pectobacterium atrosepticum SCRI1043 nitrogenase stabilizing/protective protein YP_051034.1 3288146 R 218491 CDS YP_051035.1 50121868 2881729 complement(3288372..3289547) 1 NC_004547.2 Similar to Klebsiella pneumoniae homocitrate synthase NifV SWALL:NIFV_KLEPN (SWALL:P05345) (381 aa) fasta scores: E(): 1.8e-100, 68.94% id in 380 aa, and to Enterobacter agglomerans homocitrate synthase NifV SWALL:NIFV_ENTAG (SWALL:Q52070) (400 aa) fasta scores: E(): 1.6e-95, 68.4% id in 364 aa; homocitrate synthase 3289547 nifV 2881729 nifV Pectobacterium atrosepticum SCRI1043 homocitrate synthase YP_051035.1 3288372 R 218491 CDS YP_051036.1 50121869 2881738 complement(3289561..3290769) 1 NC_004547.2 Similar to Enterobacter agglomerans cysteine desulfurase NifS SWALL:NIFS_ENTAG (SWALL:Q52069) (401 aa) fasta scores: E(): 2.6e-129, 80.09% id in 402 aa, and to Klebsiella pneumoniae cysteine desulfurase NifS SWALL:NIFS_KLEPN (SWALL:P05344) (397 aa) fasta scores: E(): 4.3e-120, 75.37% id in 402 aa; cysteine desulfurase 3290769 nifS 2881738 nifS Pectobacterium atrosepticum SCRI1043 cysteine desulfurase YP_051036.1 3289561 R 218491 CDS YP_051037.1 50121870 2881740 complement(3290800..3291639) 1 NC_004547.2 Similar to Klebsiella pneumoniae nitrogen fixation protein NifU SWALL:NIFU_KLEPN (SWALL:P05343) (274 aa) fasta scores: E(): 3e-88, 81% id in 279 aa, and to Pantoea agglomerans NifU protein NifU SWALL:Q52068 (EMBL:X99694) (275 aa) fasta scores: E(): 8.2e-84, 77.25% id in 277 aa; nitrogen fixation protein 3291639 nifU 2881740 nifU Pectobacterium atrosepticum SCRI1043 nitrogen fixation protein YP_051037.1 3290800 R 218491 CDS YP_051038.1 50121871 2881731 complement(3291866..3292333) 1 NC_004547.2 Similar to Pantoea agglomerans NifX protein NifX SWALL:Q52066 (EMBL:X99694) (154 aa) fasta scores: E(): 1.1e-37, 61.84% id in 152 aa, and to Klebsiella pneumoniae NifX protein NifX SWALL:NIFX_KLEPN (SWALL:P09136) (156 aa) fasta scores: E(): 2.9e-36, 62.74% id in 153 aa; nitrogen fixation protein 3292333 nifX 2881731 nifX Pectobacterium atrosepticum SCRI1043 nitrogen fixation protein YP_051038.1 3291866 R 218491 CDS YP_051039.1 50121872 2882067 complement(3292320..3293705) 1 NC_004547.2 functions with NifE to assemble FeMo cofactor; functions in assembly of nitrogenase MoFe; nitrogenase molybdenum-cofactor biosynthesis protein NifN 3293705 nifN 2882067 nifN Pectobacterium atrosepticum SCRI1043 nitrogenase molybdenum-cofactor biosynthesis protein NifN YP_051039.1 3292320 R 218491 CDS YP_051040.1 50121873 2881929 complement(3293715..3295088) 1 NC_004547.2 Similar to Klebsiella pneumoniae nitrogenase iron-molybdenum cofactor biosynthesis protein NifE SWALL:NIFE_KLEPN (SWALL:P08737) (457 aa) fasta scores: E(): 1.9e-156, 86.62% id in 456 aa, and to Pantoea agglomerans NifE protein NifE SWALL:Q52064 (EMBL:X99694) (457 aa) fasta scores: E(): 7.8e-147, 80.04% id in 456 aa; nitrogenase iron-molybdenum cofactor biosynthesis protein 3295088 nifE 2881929 nifE Pectobacterium atrosepticum SCRI1043 nitrogenase iron-molybdenum cofactor biosynthesis protein YP_051040.1 3293715 R 218491 CDS YP_051041.1 50121874 2881683 complement(3295378..3295986) 1 NC_004547.2 Similar to Xanthomonas campestris transcriptional regulator xcc0044 SWALL:Q8PED7 (EMBL:AE012097) (189 aa) fasta scores: E(): 7.7e-20, 49.6% id in 125 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2484 SWALL:Q9I0Z8 (EMBL:AE004676) (204 aa) fasta scores: E(): 5.9e-19, 36.68% id in 199 aa; TetR family transcriptional regulator 3295986 2881683 ECA2950 Pectobacterium atrosepticum SCRI1043 TetR family transcriptional regulator YP_051041.1 3295378 R 218491 CDS YP_051042.1 50121875 2881691 3296146..3297336 1 NC_004547.2 Similar to Pseudomonas syringae major facilitator family transporter pspto3068 SWALL:AAO56557 (EMBL:AE016867) (375 aa) fasta scores: E(): 1.1e-88, 65.14% id in 373 aa, and to Pseudomonas aeruginosa probable mfs transporter pa2314 SWALL:Q9I1G1 (EMBL:AE004657) (417 aa) fasta scores: E(): 2.6e-73, 54.02% id in 385 aa; transporter 3297336 2881691 ECA2951 Pectobacterium atrosepticum SCRI1043 transporter YP_051042.1 3296146 D 218491 CDS YP_051043.1 50121876 2881750 complement(3297654..3298316) 1 NC_004547.2 Similar to Klebsiella pneumoniae NifY protein NifY SWALL:NIFY_KLEPN (SWALL:P09135) (229 aa) fasta scores: E(): 2e-52, 60.76% id in 209 aa, and to Pantoea agglomerans NifY protein NifY SWALL:Q52063 (EMBL:X99694) (224 aa) fasta scores: E(): 4.9e-51, 58.22% id in 225 aa; nitrogen fixation protein 3298316 nifY 2881750 nifY Pectobacterium atrosepticum SCRI1043 nitrogen fixation protein YP_051043.1 3297654 R 218491 CDS YP_051044.1 50121877 2881739 complement(3298330..3298548) 1 NC_004547.2 Similar to Klebsiella pneumoniae NifT protein NifT SWALL:NIFT_KLEPN (SWALL:P09134) (72 aa) fasta scores: E(): 5e-18, 66.66% id in 72 aa, and to Pantoea agglomerans NifT protein NifT SWALL:Q52062 (EMBL:X99694) (71 aa) fasta scores: E(): 6.3e-17, 63.38% id in 71 aa; nitrogen fixation protein 3298548 nifT 2881739 nifT Pectobacterium atrosepticum SCRI1043 nitrogen fixation protein YP_051044.1 3298330 R 218491 CDS YP_051045.1 50121878 2882508 complement(3298621..3300189) 1 NC_004547.2 Similar to Klebsiella pneumoniae nitrogenase molybdenum-iron protein beta chain NifK SWALL:NIFK_KLEPN (SWALL:P09772) (520 aa) fasta scores: E(): 1.7e-185, 83.14% id in 522 aa, and to Pseudomonas stutzeri A15 mo nitrogenase subunit NifK SWALL:Q93JU9 (EMBL:AJ313205) (523 aa) fasta scores: E(): 3e-152, 68.26% id in 523 aa; nitrogenase molybdenum-iron protein subunit beta 3300189 nifK 2882508 nifK Pectobacterium atrosepticum SCRI1043 nitrogenase molybdenum-iron protein subunit beta YP_051045.1 3298621 R 218491 CDS YP_051046.1 50121879 2881928 complement(3300248..3301696) 1 NC_004547.2 Similar to Klebsiella pneumoniae nitrogenase molybdenum-iron protein alpha chain NifD SWALL:NIFD_KLEPN (SWALL:P00466) (483 aa) fasta scores: E(): 2.2e-176, 87.96% id in 482 aa, and to Azotobacter vinelandii nitrogenase molybdenum-iron protein alpha chain NifD SWALL:NIFD_AZOVI (SWALL:P07328) (491 aa) fasta scores: E(): 5e-151, 73.84% id in 478 aa; nitrogenase molybdenum-iron protein subunit alpha 3301696 nifD 2881928 nifD Pectobacterium atrosepticum SCRI1043 nitrogenase molybdenum-iron protein subunit alpha YP_051046.1 3300248 R 218491 CDS YP_051047.1 50121880 2882506 complement(3301757..3302638) 1 NC_004547.2 Similar to Klebsiella pneumoniae nitrogenase iron protein NifH SWALL:NIFH_KLEPN (SWALL:P00458) (292 aa) fasta scores: E(): 3.2e-104, 94.84% id in 291 aa, and to Azotobacter chroococcum mcd 1 nitrogenase iron protein 1 NifH1 or NifH SWALL:NIH1_AZOCH (SWALL:P26248) (291 aa) fasta scores: E(): 1.4e-96, 87.24% id in 290 aa; nitrogenase iron protein 3302638 nifH 2882506 nifH Pectobacterium atrosepticum SCRI1043 nitrogenase iron protein YP_051047.1 3301757 R 218491 CDS YP_051048.1 50121881 2882507 3303128..3306640 1 NC_004547.2 Similar to Klebsiella pneumoniae pyruvate-flavodoxin oxidoreductase NifJ SWALL:NIFJ_KLEPN (SWALL:P03833) (1171 aa) fasta scores: E(): 0, 78.27% id in 1169 aa, and to Enterobacter agglomerans pyruvate-flavodoxin oxidoreductase NifJ SWALL:NIFJ_ENTAG (SWALL:P19543) (1173 aa) fasta scores: E(): 0, 73.34% id in 1178 aa. Also similar to ECA0824 (NifJ) (47.377% id. in 1182 aa overlap); pyruvate-flavodoxin oxidoreductase 3306640 nifJ 2882507 nifJ Pectobacterium atrosepticum SCRI1043 pyruvate-flavodoxin oxidoreductase YP_051048.1 3303128 D 218491 CDS YP_051049.1 50121882 2881692 3306810..3308309 1 NC_004547.2 Similar to Corynebacterium efficiens transport protein ce2200 SWALL:BAC19010 (EMBL:AP005221) (555 aa) fasta scores: E(): 1e-89, 51.49% id in 503 aa, and to Micrococcus sp. 28 integral membrane transporter SWALL:Q8VPP9 (EMBL:AY034092) (515 aa) fasta scores: E(): 2.1e-94, 51.19% id in 502 aa; sulfate transporter 3308309 2881692 ECA2958 Pectobacterium atrosepticum SCRI1043 sulfate transporter YP_051049.1 3306810 D 218491 CDS YP_051050.1 50121883 2881693 3308676..3308993 1 NC_004547.2 hypothetical protein 3308993 2881693 ECA2959 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051050.1 3308676 D 218491 CDS YP_051051.1 50121884 2881338 complement(3309242..3310237) 1 NC_004547.2 Similar to Rhizobium loti probable peptide ABC transporter ATP-binding abc transporter protein msi192 SWALL:Q8KJF3 (EMBL:AL672113) (335 aa) fasta scores: E(): 1.6e-55, 52.81% id in 320 aa, and to Bacillus halodurans oligopeptide ABC transporter appd or bh0350 SWALL:Q9KFX0 (EMBL:AP001508) (329 aa) fasta scores: E(): 6.5e-57, 53.53% id in 325 aa; ABC transporter ATP-binding protein 3310237 2881338 ECA2960 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_051051.1 3309242 R 218491 CDS YP_051052.1 50121885 2881339 complement(3310240..3311103) 1 NC_004547.2 Similar to Brucella abortus ABC transporter permease protein c batn1953.orf22 SWALL:Q8VQK5 (EMBL:AF454951) (296 aa) fasta scores: E(): 6.2e-46, 43.86% id in 269 aa, and to Agrobacterium tumefaciens ABC transporter, membrane spanning protein atu3267 or agr_l_3102 SWALL:Q8UAV0 (EMBL:AE009256) (291 aa) fasta scores: E(): 3.6e-45, 44.44% id in 270 aa; ABC transporter permease 3311103 2881339 ECA2961 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_051052.1 3310240 R 218491 CDS YP_051053.1 50121886 2881340 complement(3311105..3312061) 1 NC_004547.2 Similar to Agrobacterium tumefaciens ABC transporter, membrane spanning protein atu3268 or agr_l_3101 SWALL:Q8UAU9 (EMBL:AE009256) (313 aa) fasta scores: E(): 1.6e-50, 47.72% id in 308 aa, and to Bradyrhizobium japonicum ABC transporter permease protein blr3342 SWALL:BAC48607 (EMBL:AP005947) (313 aa) fasta scores: E(): 6.3e-50, 47.07% id in 308 aa; ABC transporter permease 3312061 2881340 ECA2962 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_051053.1 3311105 R 218491 CDS YP_051054.1 50121887 2882041 complement(3312074..3313639) 1 NC_004547.2 Similar to Agrobacterium tumefaciens ABC transporter, substrate binding protein atu3269 or agr_l_3099 SWALL:Q8UAU8 (EMBL:AE009256) (517 aa) fasta scores: E(): 1.6e-43, 31.66% id in 518 aa, and to Bradyrhizobium japonicum ABC transporter peptide-binding protein blr0308 SWALL:BAC45573 (EMBL:AP005936) (518 aa) fasta scores: E(): 7.8e-41, 30.42% id in 516 aa; ABC transporter substrate binding protein 3313639 2882041 ECA2963 Pectobacterium atrosepticum SCRI1043 ABC transporter substrate binding protein YP_051054.1 3312074 R 218491 CDS YP_051055.1 50121888 2882042 complement(3313691..3314908) 1 NC_004547.2 Similar to Oceanobacillus iheyensis hypothetical conserved protein ob3166 SWALL:Q8ELQ3 (EMBL:AP004603) (399 aa) fasta scores: E(): 7.7e-81, 58.91% id in 387 aa, and to Staphylococcus aureus HmrA protein HmrA or mw2057 SWALL:Q8NVF8 (EMBL:AP004829) (394 aa) fasta scores: E(): 1.8e-61, 46.68% id in 392 aa; peptidase 3314908 2882042 ECA2964 Pectobacterium atrosepticum SCRI1043 peptidase YP_051055.1 3313691 R 218491 CDS YP_051056.1 50121889 2882043 3315479..3316660 1 NC_004547.2 Similar to Streptomyces coelicolor isomerase sco3475 or sce65.11c or sce56.11C SWALL:Q9RKG2 (EMBL:AL939116) (377 aa) fasta scores: E(): 1.1e-43, 39.08% id in 394 aa, and to Oceanobacillus iheyensis hypothetical protein ob2215 SWALL:BAC14171 (EMBL:AP004600) (382 aa) fasta scores: E(): 6.9e-41, 36.36% id in 396 aa; mandelate racemase/muconate lactonizing protein 3316660 2882043 ECA2965 Pectobacterium atrosepticum SCRI1043 mandelate racemase/muconate lactonizing protein YP_051056.1 3315479 D 218491 CDS YP_051057.1 50121890 2882044 3317025..3317858 1 NC_004547.2 Similar to Bradyrhizobium japonicum ABC transporter substrate-binding protein blr8117 SWALL:BAC53382 (EMBL:AP005964) (284 aa) fasta scores: E(): 1.5e-26, 34.84% id in 264 aa, and to Streptococcus pneumoniae ABC transporter substrate-binding protein-glutamine-binding protein GlnH or spr1251 SWALL:AAL00055 (EMBL:AE008497) (271 aa) fasta scores: E(): 3.2e-13, 28.93% id in 273 aa; extracellular solute-binding protein 3317858 2882044 ECA2966 Pectobacterium atrosepticum SCRI1043 extracellular solute-binding protein YP_051057.1 3317025 D 218491 CDS YP_051058.1 50121891 2881566 complement(3317894..3319309) 1 NC_004547.2 Similar to Bradyrhizobium japonicum Bll6362 protein Bll6362 SWALL:BAC51627 (EMBL:AP005958) (477 aa) fasta scores: E(): 4.9e-07, 26.58% id in 459 aa, and to Rhizobium loti hypothetical protein Mll9010 SWALL:Q982L5 (EMBL:AP003015) (457 aa) fasta scores: E(): 5.4e-07, 26.48% id in 438 aa; dehydratase 3319309 2881566 ECA2967 Pectobacterium atrosepticum SCRI1043 dehydratase YP_051058.1 3317894 R 218491 CDS YP_051059.1 50121892 2881567 3319656..3320333 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri glutamine transport system permease protein glnp glnp or b0810 or c0895 or z1032 or ecs0888 or sf0761 SWALL:GLNP_ECOLI (SWALL:P10345) (219 aa) fasta scores: E(): 1.3e-22, 38.46% id in 221 aa, and to Bradyrhizobium japonicum ABC transporter permease protein blr8118 SWALL:BAC53383 (EMBL:AP005964) (220 aa) fasta scores: E(): 3.9e-29, 40.18% id in 219 aa; ABC transporter permease 3320333 2881567 ECA2968 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_051059.1 3319656 D 218491 CDS YP_051060.1 50121893 2881568 3320342..3321007 1 NC_004547.2 Similar to Bradyrhizobium japonicum ABC transporter permease protein blr8118 SWALL:BAC53383 (EMBL:AP005964) (220 aa) fasta scores: E(): 9.4e-32, 44.29% id in 219 aa, and to Bacillus halodurans ABC transporter bh1462 SWALL:Q9KCV7 (EMBL:AP001512) (218 aa) fasta scores: E(): 1.4e-28, 40.74% id in 216 aa; ABC transporter permease 3321007 2881568 ECA2969 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_051060.1 3320342 D 218491 CDS YP_051061.1 50121894 2885302 3321031..3321861 1 NC_004547.2 Similar to Corynebacterium efficiens amino acid ABC transporter ATP-binding protein ce1443 SWALL:BAC18253 (EMBL:AP005218) (254 aa) fasta scores: E(): 1.1e-43, 57.32% id in 239 aa, and to Streptomyces coelicolor ATP-binding protein atrc or sco5258 or 2sc7g11.20C SWALL:Q9F3K7 (EMBL:AL939123) (253 aa) fasta scores: E(): 1.6e-43, 55.02% id in 249 aa; ABC transporter ATP-binding protein 3321861 2885302 ECA2970 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_051061.1 3321031 D 218491 CDS YP_051062.1 50121895 2885303 3321890..3322807 1 NC_004547.2 Similar to Listeria monocytogenes D-alanine aminotransferase Dat or DaaA or lmo1619 SWALL:DAAA_LISMO (SWALL:O85046) (289 aa) fasta scores: E(): 2.2e-24, 35.21% id in 284 aa, and to Methanopyrus kandleri branched-chain amino acid aminotransferase ilve or mk1627 SWALL:Q8TUX5 (EMBL:AE010451) (295 aa) fasta scores: E(): 6.5e-30, 34.05% id in 276 aa; branched-chain amino acid aminotransferase 3322807 2885303 ECA2971 Pectobacterium atrosepticum SCRI1043 branched-chain amino acid aminotransferase YP_051062.1 3321890 D 218491 CDS YP_051063.1 50121896 2885304 complement(3322879..3324231) 1 NC_004547.2 Similar to Pseudomonas putida hydrolase, alpha/beta fold family pp4540 SWALL:AAN70113 (EMBL:AE016791) (270 aa) fasta scores: E(): 1e-14, 27.92% id in 265 aa, and to Vibrio vulnificus predicted hydrolase or acyltransferase vv10627 SWALL:AAO09141 (EMBL:AE016799) (272 aa) fasta scores: E(): 1.4e-14, 29% id in 262 aa; hydrolase 3324231 2885304 ECA2972 Pectobacterium atrosepticum SCRI1043 hydrolase YP_051063.1 3322879 R 218491 CDS YP_051064.1 50121897 2885305 3324257..3325147 1 NC_004547.2 Similar to Rhizobium meliloti transcription regulator protein r02971 or smc03122 SWALL:Q92LQ9 (EMBL:AL591792) (315 aa) fasta scores: E(): 2.5e-28, 35.31% id in 286 aa, and to Brucella suis transcriptional regulator, LysR family bra0952 SWALL:AAN34123 (EMBL:AE014588) (304 aa) fasta scores: E(): 2e-27, 31.29% id in 294 aa; LysR family transcriptional regulator 3325147 2885305 ECA2973 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_051064.1 3324257 D 218491 CDS YP_051065.1 50121898 2885313 3325375..3325824 1 NC_004547.2 Similar to Escherichia coli mutator MutT protein MutT or b0099 SWALL:MUTT_ECOLI (SWALL:P08337) (129 aa) fasta scores: E(): 7.6e-05, 27.04% id in 122 aa, and to Agrobacterium tumefaciens MutT like protein atu1834 or agr_c_3368 SWALL:Q8UEC6 (EMBL:AE009138) (147 aa) fasta scores: E(): 4.4e-08, 31.49% id in 127 aa; MutT-like protein 3325824 2885313 ECA2974 Pectobacterium atrosepticum SCRI1043 MutT-like protein YP_051065.1 3325375 D 218491 CDS YP_051066.1 50121899 2885314 complement(3325954..3326604) 1 NC_004547.2 Similar to unidentified bacterium hypothetical 22.4 kDa protein SWALL:Q93DV2 (EMBL:AF378538) (199 aa) fasta scores: E(): 1.2e-17, 35.67% id in 199 aa, and to Deinococcus radiodurans hypothetical protein Dr0445 SWALL:Q9RX70 (EMBL:AE001904) (191 aa) fasta scores: E(): 2.9e-17, 37.85% id in 177 aa; hypothetical protein 3326604 2885314 ECA2975 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051066.1 3325954 R 218491 CDS YP_051067.1 50121900 2885315 complement(3326722..3327630) 1 NC_004547.2 Similar to Pseudomonas fluorescens transcriptional regulator SWALL:AAN32873 (EMBL:AF461725) (238 aa) fasta scores: E(): 7.6e-57, 61.34% id in 238 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0448 SWALL:Q9I670 (EMBL:AE004482) (302 aa) fasta scores: E(): 2.4e-41, 39.86% id in 301 aa. Also similar to ECA1602 (96.026% id. in 302 aa overlap); LysR family transcriptional regulator 3327630 2885315 ECA2976 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_051067.1 3326722 R 218491 CDS YP_051068.1 50121901 2885805 3327796..3328329 1 NC_004547.2 Similar to Pseudomonas fluorescens hypothetical protein SWALL:AAN32872 (EMBL:AF461725) (79 aa) fasta scores: E(): 1.6e-14, 59.42% id in 69 aa, and to Bradyrhizobium japonicum Blr3308 protein blr3308 SWALL:BAC48573 (EMBL:AP005947) (105 aa) fasta scores: E(): 0.04, 31.34% id in 67 aa; hypothetical protein 3328329 2885805 ECA2977 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051068.1 3327796 D 218491 CDS YP_051069.1 50121902 2885806 3328334..3328660 1 NC_004547.2 hypothetical protein 3328660 2885806 ECA2978 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051069.1 3328334 D 218491 CDS YP_051070.1 50121903 2885807 3328674..3329513 1 NC_004547.2 Similar to Pseudomonas sp. WBC-3 methyl parathion hydrolase mpD SWALL:Q841S6 (EMBL:AY251554) (331 aa) fasta scores: E(): 2.6e-22, 31.57% id in 285 aa, and to Plesiomonas sp. DLL-1 methyl parathion degrading protein SWALL:Q93SP1 (EMBL:AY029773) (341 aa) fasta scores: E(): 2.6e-22, 31.57% id in 285 aa; hydrolase 3329513 2885807 ECA2979 Pectobacterium atrosepticum SCRI1043 hydrolase YP_051070.1 3328674 D 218491 CDS YP_051071.1 50121904 2885109 complement(3329725..3330060) 1 NC_004547.2 hypothetical protein 3330060 2885109 ECA2980 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051071.1 3329725 R 218491 CDS YP_051072.1 50121905 2885110 3330105..3332162 1 NC_004547.2 Similar to Leptospira interrogans conserved hypothetical protein lb047 SWALL:AAN51606 (EMBL:AE011593) (440 aa) fasta scores: E(): 1.7e-05, 23.3% id in 339 aa, and to Shewanella oneidensis hypothetical protein so1002 SWALL:AAN54075 (EMBL:AE015544) (770 aa) fasta scores: E(): 5.4e-05, 25.16% id in 445 aa; hypothetical protein 3332162 2885110 ECA2981 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051072.1 3330105 D 218491 CDS YP_051073.1 50121906 2885126 3332182..3332514 1 NC_004547.2 member of the small MDR (multidrug resistance) family of transporters; in Escherichia coli this protein provides resistance against a number of positively charged compounds including ethidium bromide and erythromycin; proton-dependent secondary transporter which exchanges protons for compound translocation; multidrug efflux protein 3332514 emrE 2885126 emrE Pectobacterium atrosepticum SCRI1043 multidrug efflux protein YP_051073.1 3332182 D 218491 CDS YP_051074.1 50121907 2885111 3332535..3332705 1 NC_004547.2 hypothetical protein 3332705 2885111 ECA2983 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051074.1 3332535 D 218491 CDS YP_051075.1 50121908 2882652 complement(3332713..3333801) 1 NC_004547.2 Similar to Pseudomonas putida xenobiotic reductase a XenA SWALL:Q9R9V9 (EMBL:AF154061) (363 aa) fasta scores: E(): 2.4e-114, 75.96% id in 362 aa, and to Xanthomonas campestris xenobiotic flavin oxidoreductase a frp or xcc1170 SWALL:Q8PBF2 (EMBL:AE012216) (366 aa) fasta scores: E(): 2.5e-104, 70.44% id in 362 aa; flavoprotein xenobiotic reductase 3333801 xenA 2882652 xenA Pectobacterium atrosepticum SCRI1043 flavoprotein xenobiotic reductase YP_051075.1 3332713 R 218491 CDS YP_051076.1 50121909 2885112 3333853..3334194 1 NC_004547.2 Similar to Pseudomonas putida transcriptional regulator, ArsR family pp1253 SWALL:AAN66877 (EMBL:AE016778) (111 aa) fasta scores: E(): 1.1e-24, 65% id in 100 aa, and to Anabaena sp. transcriptional regulator alr1867 SWALL:Q8YVV6 (EMBL:AP003587) (112 aa) fasta scores: E(): 3.3e-16, 50.49% id in 101 aa; transcriptional regulator ArsR 3334194 2885112 ECA2985 Pectobacterium atrosepticum SCRI1043 transcriptional regulator ArsR YP_051076.1 3333853 D 218491 CDS YP_051077.1 50121910 2885174 3334274..3334795 1 NC_004547.2 Similar to Klebsiella oxytoca e-2/e-2' protein SWALL:Q9ZFE7 (EMBL:AF102514) (179 aa) fasta scores: E(): 5.4e-29, 47.61% id in 168 aa, and to Pseudomonas aeruginosa probable oxidase pa1684 SWALL:Q9I341 (EMBL:AE004595) (181 aa) fasta scores: E(): 5.4e-33, 50.88% id in 169 aa; oxidase 3334795 2885174 ECA2986 Pectobacterium atrosepticum SCRI1043 oxidase YP_051077.1 3334274 D 218491 CDS YP_051078.1 50121911 2885175 3334880..3335344 1 NC_004547.2 Similar to Escherichia coli hypothetical protein yehs or b2124 SWALL:YEHS_ECOLI (SWALL:P33355) (156 aa) fasta scores: E(): 1.4e-37, 62.82% id in 156 aa, and to Salmonella typhimurium, and Salmonella typhi cytoplasmic protein yehs or stm2157 or sty2387 SWALL:Q8XEY4 (EMBL:AE008796) (155 aa) fasta scores: E(): 1e-36, 64% id in 150 aa; hypothetical protein 3335344 2885175 ECA2987 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051078.1 3334880 D 218491 CDS YP_051079.1 50121912 2885176 complement(3335434..>3335667) 1 NC_004547.2 Similar to the C-terminal region of many including Salmonella typhimurium inner membrane protein stm4518 SWALL:Q8ZJZ4 (EMBL:AE008912) (171 aa) fasta scores: E(): 0.0011, 36.61% id in 71 aa, and to Escherichia coli, and Salmonella typhimurium ydga protein ydga or ygdB SWALL:Q9Z4C7 (EMBL:AB021078) (313 aa) fasta scores: E(): 6.5e-07, 49.25% id in 67 aa, and to Photorhabdus luminescens truncated transposase SWALL:Q937N5 (EMBL:AF346497) (79 aa) fasta scores: E(): 0.069, 36% id in 75 aa; hypothetical protein >3335667 2885176 ECA2988 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051079.1 3335434 R 218491 CDS YP_051080.1 50121913 2881282 complement(3335911..3336744) 1 NC_004547.2 Similar to Paracoccus denitrificans uroporphyrin-III C-methyltransferase NirE SWALL:NIRE_PARDE (SWALL:Q51701) (287 aa) fasta scores: E(): 2.3e-41, 49.6% id in 256 aa, and to Vibrio cholerae uroporphyrin-III C-methyltransferase vc2561 SWALL:Q9KP18 (EMBL:AE004324) (299 aa) fasta scores: E(): 1.6e-48, 58.15% id in 239 aa; uroporphyrin-III C-methyltransferase 3336744 nirE 2881282 nirE Pectobacterium atrosepticum SCRI1043 uroporphyrin-III C-methyltransferase YP_051080.1 3335911 R 218491 CDS YP_051081.1 50121914 2882974 complement(3336770..3339478) 1 NC_004547.2 Similar to Klebsiella pneumoniae nitrate reductase NasA SWALL:NASA_KLEPN (SWALL:Q06457) (866 aa) fasta scores: E(): 3.4e-170, 56.46% id in 882 aa, and to Agrobacterium tumefaciens nitrate reductase large subunit NasA or atu3900 or agr_l_1895 SWALL:Q8U930 (EMBL:AE009320) (903 aa) fasta scores: E(): 9e-163, 53.77% id in 887 aa; nitrate reductase 3339478 nasA 2882974 nasA Pectobacterium atrosepticum SCRI1043 nitrate reductase YP_051081.1 3336770 R 218491 CDS YP_051082.1 50121915 2882975 complement(3339475..3343662) 1 NC_004547.2 Similar to Klebsiella pneumoniae nitrite reductase [NAD(P)H] large subunit NasB SWALL:NIRB_KLEPN (SWALL:Q06458) (957 aa) fasta scores: E(): 0, 70.89% id in 962 aa; nitrite reductase [NAD(P)H] large subunit 3343662 nasB 2882975 nasB Pectobacterium atrosepticum SCRI1043 nitrite reductase [NAD(P)H] large subunit YP_051082.1 3339475 R 218491 CDS YP_051083.1 50121916 2882976 complement(3343682..3344476) 1 NC_004547.2 Similar to Klebsiella pneumoniae nitrate transport protein NasD SWALL:NASD_KLEPN (SWALL:P39459) (262 aa) fasta scores: E(): 2.8e-80, 83.46% id in 260 aa; nitrate transport protein 3344476 nasD 2882976 nasD Pectobacterium atrosepticum SCRI1043 nitrate transport protein YP_051083.1 3343682 R 218491 CDS YP_051084.1 50121917 2882967 complement(3344487..3345329) 1 NC_004547.2 Similar to Klebsiella oxytoca nitrate transporter component nasE SWALL:O32709 (EMBL:L27431) (294 aa) fasta scores: E(): 1.9e-78, 74.03% id in 285 aa; nitrate transporter permease 3345329 nasE 2882967 nasE Pectobacterium atrosepticum SCRI1043 nitrate transporter permease YP_051084.1 3344487 R 218491 CDS YP_051085.1 50121918 2882968 complement(3345414..3346676) 1 NC_004547.2 Similar to Klebsiella oxytoca nitrate transporter component nasF SWALL:Q48466 (EMBL:L27431) (418 aa) fasta scores: E(): 3.4e-118, 65.85% id in 410 aa; nitrate-binding proteint 3346676 nasF 2882968 nasF Pectobacterium atrosepticum SCRI1043 nitrate-binding proteint YP_051085.1 3345414 R 218491 CDS YP_051086.1 50121919 2882969 complement(3347618..3348907) 1 NC_004547.2 Similar to Klebsiella pneumoniae nitrate regulatory protein nasR SWALL:Q48468 (EMBL:L27824) (396 aa) fasta scores: E(): 2.5e-28, 35.11% id in 430 aa; nitrate-and nitrite-responsive positive regulator 3348907 nasR 2882969 nasR Pectobacterium atrosepticum SCRI1043 nitrate-and nitrite-responsive positive regulator YP_051086.1 3347618 R 218491 CDS YP_051087.1 50121920 2885788 3349209..3351068 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum tail fiber SWALL:Q9KW53 (EMBL:AB045036) (632 aa) fasta scores: E(): 2.3e-64, 45.92% id in 577 aa, and to Salmonella typhi bacteriophage tail fiber protein sty1637 SWALL:Q8Z6S9 (EMBL:AL627270) (341 aa) fasta scores: E(): 3.1e-26, 47.36% id in 209 aa; bacteriophage tail fiber protein 3351068 2885788 ECA2996 Pectobacterium atrosepticum SCRI1043 bacteriophage tail fiber protein YP_051087.1 3349209 D 218491 CDS YP_051088.1 50121921 2885789 3351068..3351610 1 NC_004547.2 Similar to Escherichia coli tail fiber assembly protein homolog T SWALL:TFAB_ECOLI (SWALL:Q47427) (203 aa) fasta scores: E(): 1.6e-18, 42.2% id in 154 aa, and to Bacteriophage HK97 gp29 tfA SWALL:Q9MCR5 (EMBL:AF069529) (202 aa) fasta scores: E(): 7.9e-19, 43.79% id in 153 aa; bacteriophage tail fiber assembly protein 3351610 2885789 ECA2997 Pectobacterium atrosepticum SCRI1043 bacteriophage tail fiber assembly protein YP_051088.1 3351068 D 218491 CDS YP_051089.1 50121922 2883100 3352107..3353684 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri cytochrome D ubiquinol oxidase subunit I CydA or Cyd-1 or b0733 or c0811 or sf0564 SWALL:CYDA_ECOLI (SWALL:P11026) (522 aa) fasta scores: E(): 1.2e-172, 80.15% id in 524 aa; cytochrome d ubiquinol oxidase subunit I 3353684 cydA2 2883100 cydA2 Pectobacterium atrosepticum SCRI1043 cytochrome d ubiquinol oxidase subunit I YP_051089.1 3352107 D 218491 CDS YP_051090.1 50121923 2883051 3353699..3354838 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 cytochrome D ubiquinol oxidase subunit II CydB or Cyd-2 or b0734 or c0812 or z0901 or ecs0769 SWALL:CYDB_ECOLI (SWALL:P11027) (379 aa) fasta scores: E(): 1.3e-106, 69.12% id in 379 aa; cytochrome D ubiquinol oxidase subunit II 3354838 cydB2 2883051 cydB2 Pectobacterium atrosepticum SCRI1043 cytochrome D ubiquinol oxidase subunit II YP_051090.1 3353699 D 218491 CDS YP_051091.1 50121924 2885790 3355116..3355481 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein yidh yidh or b3676 or c4600 or z5171 or ecs4617 or sf3786 SWALL:YIDH_ECOLI (SWALL:P31445) (115 aa) fasta scores: E(): 1e-17, 51.4% id in 107 aa, and to Salmonella typhimurium inner membrane protein yidh or stm3805 SWALL:Q8ZL05 (EMBL:AE008877) (115 aa) fasta scores: E(): 1.9e-17, 50.46% id in 107 aa; hypothetical protein 3355481 2885790 ECA3000 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051091.1 3355116 D 218491 CDS YP_051092.1 50121925 2885791 3355485..3355811 1 NC_004547.2 Similar to Mycobacterium tuberculosis hypothetical protein rv2273 or mt2334 or mtcy339.37C SWALL:YM73_MYCTU (SWALL:Q50690) (109 aa) fasta scores: E(): 0.017, 33.66% id in 101 aa, and to Corynebacterium glutamicum hypothetical membrane protein Cgl0104 SWALL:Q8NU43 (EMBL:AP005274) (105 aa) fasta scores: E(): 0.32, 22.68% id in 97 aa; hypothetical protein 3355811 2885791 ECA3001 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051092.1 3355485 D 218491 CDS YP_051093.1 50121926 2883036 complement(3355865..3356794) 1 NC_004547.2 required for the formation of active formate dehydrogenase; formate dehydrogenase accessory protein FdhE 3356794 fdhE 2883036 fdhE Pectobacterium atrosepticum SCRI1043 formate dehydrogenase accessory protein FdhE YP_051093.1 3355865 R 218491 CDS YP_051094.1 50121927 2885783 complement(3357067..3358506) 1 NC_004547.2 Similar to Yersinia pestis multi modular, transcriptional regulator, also ATP-binding component of a transport system y2350 SWALL:AAM85908 (EMBL:AE013837) (482 aa) fasta scores: E(): 4.4e-116, 63.02% id in 476 aa, and to Escherichia coli hypothetical protein ydcr or b1439 SWALL:YDCR_ECOLI (SWALL:P77730) (468 aa) fasta scores: E(): 5e-114, 62.23% id in 474 aa; GntR family transcriptional regulator 3358506 2885783 ECA3004 Pectobacterium atrosepticum SCRI1043 GntR family transcriptional regulator YP_051094.1 3357067 R 218491 CDS YP_051095.1 50121928 2885784 complement(3358615..3359337) 1 NC_004547.2 Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; glutamine amidotransferase 3359337 2885784 ECA3005 Pectobacterium atrosepticum SCRI1043 glutamine amidotransferase YP_051095.1 3358615 R 218491 CDS YP_051096.1 50121929 2885785 complement(3359576..3360058) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo1652 or y1815 SWALL:Q8ZFP2 (EMBL:AJ414149) (177 aa) fasta scores: E(): 4.5e-28, 47.74% id in 155 aa, and to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein ylac or b0458 or z0570 or ecs0511 or sf0403 SWALL:AAN42059 (EMBL:AE000152) (169 aa) fasta scores: E(): 5.7e-20, 40.88% id in 159 aa; hypothetical protein 3360058 2885785 ECA3006 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051096.1 3359576 R 218491 CDS YP_051097.1 50121930 2884869 complement(3360233..3360862) 1 NC_004547.2 Similar to Escherichia coli O157:H7 orf, hypothetical protein chuy or z4917 or ecs4385 SWALL:Q8X5N4 (EMBL:AE005576) (207 aa) fasta scores: E(): 2.1e-40, 56.79% id in 206 aa, and to Shigella dysenteriae hypothetical 21.8 kDa protein shuY SWALL:O70016 (EMBL:U64516) (207 aa) fasta scores: E(): 4.4e-40, 57.28% id in 206 aa; hypothetical protein 3360862 2884869 ECA3007 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051097.1 3360233 R 218491 CDS YP_051098.1 50121931 2884870 complement(3360859..3361359) 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein chux or c4315 SWALL:AAN82751 (EMBL:AE016768) (164 aa) fasta scores: E(): 1.6e-42, 65% id in 160 aa, and to Shigella dysenteriae hypothetical 18.4 kDa protein shuX SWALL:O70017 (EMBL:U64516) (164 aa) fasta scores: E(): 5.1e-41, 63.75% id in 160 aa; hypothetical protein 3361359 2884870 ECA3008 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051098.1 3360859 R 218491 CDS YP_051099.1 50121932 2884871 complement(3361374..3362687) 1 NC_004547.2 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 3362687 2884871 ECA3009 Pectobacterium atrosepticum SCRI1043 coproporphyrinogen III oxidase YP_051099.1 3361374 R 218491 CDS YP_051100.1 50121933 2884839 complement(3363084..3364676) 1 NC_004547.2 Similar to Yersinia pestis ABC transporter ATP-binding protein ypo1491 SWALL:Q8ZG28 (EMBL:AJ414148) (531 aa) fasta scores: E(): 2.3e-170, 92.45% id in 530 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical ABC transporter ATP-binding protein ybit or b0820 or c0906 or z1042 or ecs0897 SWALL:YBIT_ECOLI (SWALL:P75790) (530 aa) fasta scores: E(): 1.1e-163, 87.54% id in 530 aa; ABC transporter ATP-binding protein 3364676 2884839 ECA3010 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_051100.1 3363084 R 218491 CDS YP_051101.1 50121934 2885411 3364794..3365690 1 NC_004547.2 Similar to Erwinia chrysanthemi antibiotic biosynthesis protein Pab SWALL:Q93KB5 (EMBL:AJ310612) (293 aa) fasta scores: E(): 3e-67, 58.24% id in 297 aa, and to Xanthomonas axonopodis hypothetical protein Xac2912 xac2912 SWALL:Q8PII5 (EMBL:AE011933) (292 aa) fasta scores: E(): 1.2e-34, 39.59% id in 298 aa; hypothetical protein 3365690 pab 2885411 pab Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051101.1 3364794 D 218491 CDS YP_051102.1 50121935 2884840 3365704..3366279 1 NC_004547.2 Similar to Escherichia coli ribosomal-protein-serine acetyltransferase RimL or b1427 SWALL:RIML_ECOLI (SWALL:P13857) (179 aa) fasta scores: E(): 3.6e-16, 38.88% id in 162 aa, and to Shigella flexneri acetylation of N-terminal serine of 30S ribosomal subunit protein l7, acetyl transferase RimL or sf1783 SWALL:AAN43352 (EMBL:AE015198) (183 aa) fasta scores: E(): 9.1e-18, 38.98% id in 177 aa; acetyltransferase 3366279 2884840 ECA3012 Pectobacterium atrosepticum SCRI1043 acetyltransferase YP_051102.1 3365704 D 218491 CDS YP_051103.1 50121936 2884250 3366849..3368273 1 NC_004547.2 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; PTS system trehalose(maltose)-specific transporter subunit IIBC 3368273 treB 2884250 treB Pectobacterium atrosepticum SCRI1043 PTS system trehalose(maltose)-specific transporter subunit IIBC YP_051103.1 3366849 D 218491 CDS YP_051104.1 50121937 2884251 3368339..3370030 1 NC_004547.2 Similar to Escherichia coli trehalose-6-phosphate hydrolase TreC or OlgH or b4239 SWALL:TREC_ECOLI (SWALL:P28904) (551 aa) fasta scores: E(): 1.1e-171, 70.05% id in 551 aa; trehalose-6-phosphate hydrolase 3370030 treC 2884251 treC Pectobacterium atrosepticum SCRI1043 trehalose-6-phosphate hydrolase YP_051104.1 3368339 D 218491 CDS YP_051105.1 50121938 2884841 complement(3370188..3370499) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi inner membrane protein ElaB or stm2311 or sty2542 SWALL:Q8XF60 (EMBL:AE008803) (103 aa) fasta scores: E(): 1e-19, 68.42% id in 95 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ElaB protein ElaB or b2266 or c2810 or z3526 or ecs3154 SWALL:ELAB_ECOLI (SWALL:P52084) (101 aa) fasta scores: E(): 3.3e-19, 65.26% id in 95 aa; hypothetical protein 3370499 2884841 ECA3015 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051105.1 3370188 R 218491 CDS YP_051106.1 50121939 2883977 complement(3370688..3372145) 1 NC_004547.2 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 3372145 nuoN 2883977 nuoN Pectobacterium atrosepticum SCRI1043 NADH dehydrogenase subunit N YP_051106.1 3370688 R 218491 CDS YP_051107.1 50121940 2883976 complement(3372152..3373687) 1 NC_004547.2 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 3373687 nuoM 2883976 nuoM Pectobacterium atrosepticum SCRI1043 NADH dehydrogenase subunit M YP_051107.1 3372152 R 218491 CDS YP_051108.1 50121941 2883975 complement(3373788..3375638) 1 NC_004547.2 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 3375638 nuoL 2883975 nuoL Pectobacterium atrosepticum SCRI1043 NADH dehydrogenase subunit L YP_051108.1 3373788 R 218491 CDS YP_051109.1 50121942 2884007 complement(3375635..3375937) 1 NC_004547.2 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 3375937 nuoK 2884007 nuoK Pectobacterium atrosepticum SCRI1043 NADH dehydrogenase subunit K YP_051109.1 3375635 R 218491 CDS YP_051110.1 50121943 2884006 complement(3375934..3376497) 1 NC_004547.2 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 3376497 nuoJ 2884006 nuoJ Pectobacterium atrosepticum SCRI1043 NADH dehydrogenase subunit J YP_051110.1 3375934 R 218491 CDS YP_051111.1 50121944 2884005 complement(3376507..3377049) 1 NC_004547.2 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 3377049 nuoI 2884005 nuoI Pectobacterium atrosepticum SCRI1043 NADH dehydrogenase subunit I YP_051111.1 3376507 R 218491 CDS YP_051112.1 50121945 2884004 complement(3377067..3378041) 1 NC_004547.2 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 3378041 nuoH 2884004 nuoH Pectobacterium atrosepticum SCRI1043 NADH dehydrogenase subunit H YP_051112.1 3377067 R 218491 CDS YP_051113.1 50121946 2884938 complement(3378038..3380764) 1 NC_004547.2 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit G 3380764 nuoG 2884938 nuoG Pectobacterium atrosepticum SCRI1043 NADH dehydrogenase subunit G YP_051113.1 3378038 R 218491 CDS YP_051114.1 50121947 2884937 complement(3380952..3382301) 1 NC_004547.2 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; NADH dehydrogenase I subunit F 3382301 nuoF 2884937 nuoF Pectobacterium atrosepticum SCRI1043 NADH dehydrogenase I subunit F YP_051114.1 3380952 R 218491 CDS YP_051115.1 50121948 2884936 complement(3382298..3382843) 1 NC_004547.2 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit E 3382843 nuoE 2884936 nuoE Pectobacterium atrosepticum SCRI1043 NADH dehydrogenase subunit E YP_051115.1 3382298 R 218491 CDS YP_051116.1 50121949 2884705 complement(3382846..3384645) 1 NC_004547.2 NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 3384645 nuoC 2884705 nuoC Pectobacterium atrosepticum SCRI1043 bifunctional NADH:ubiquinone oxidoreductase subunit C/D YP_051116.1 3382846 R 218491 CDS YP_051117.1 50121950 2884704 complement(3384744..3385418) 1 NC_004547.2 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 3385418 nuoB 2884704 nuoB Pectobacterium atrosepticum SCRI1043 NADH dehydrogenase subunit B YP_051117.1 3384744 R 218491 CDS YP_051118.1 50121951 2884703 complement(3385436..3385876) 1 NC_004547.2 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit A 3385876 nuoA 2884703 nuoA Pectobacterium atrosepticum SCRI1043 NADH dehydrogenase subunit A YP_051118.1 3385436 R 218491 CDS YP_051119.1 50121952 2884842 3386178..3386327 1 NC_004547.2 Similar to Vibrio cholerae hypothetical protein Vc2680 SWALL:Q9KNQ1 (EMBL:AE004333) (47 aa) fasta scores: E(): 7, 44.44% id in 27 aa. Also identical to ECA3031; hypothetical protein 3386327 2884842 ECA3029 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051119.1 3386178 D 218491 CDS YP_051120.1 50121953 2882432 complement(3386554..3387504) 1 NC_004547.2 Previously sequenced in Pectobacterium carotovorum subsp. atrosepticum as HexA SWALL:O85276 (EMBL:AF057064) (316 aa) fasta scores: E(): 4.1e-120, 99.68% id in 316 aa, and similar to Erwinia chrysanthemi pectinase gene transcriptional regulator PecT SWALL:PECT_ERWCH (SWALL:P52662) (316 aa) fasta scores: E(): 6.8e-95, 79.36% id in 315 aa. Also identical to ECA3032; LysR family transcriptional regulator 3387504 hexA1 2882432 hexA1 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_051120.1 3386554 R 218491 CDS YP_051121.1 50121954 2884723 3387665..3387814 1 NC_004547.2 Similar to Vibrio cholerae hypothetical protein Vc2680 SWALL:Q9KNQ1 (EMBL:AE004333) (47 aa) fasta scores: E(): 7, 44.44% id in 27 aa. Also identical to ECA3029; hypothetical protein 3387814 2884723 ECA3031 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051121.1 3387665 D 218491 CDS YP_051122.1 50121955 2882433 complement(3388041..3388991) 1 NC_004547.2 Previously sequenced in Pectobacterium carotovorum subsp. atrosepticum as HexA SWALL:O85276 (EMBL:AF057064) (316 aa) fasta scores: E(): 4.1e-120, 99.68% id in 316 aa, and similar to Erwinia chrysanthemi pectinase gene transcriptional regulator PecT SWALL:PECT_ERWCH (SWALL:P52662) (316 aa) fasta scores: E(): 6.8e-95, 79.36% id in 315 aa. Also identical to ECA3030; LysR family transcriptional regulator 3388991 hexA2 2882433 hexA2 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_051122.1 3388041 R 218491 CDS YP_051123.1 50121956 2884724 3389494..3390708 1 NC_004547.2 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; aminotransferase 3390708 2884724 ECA3033 Pectobacterium atrosepticum SCRI1043 aminotransferase YP_051123.1 3389494 D 218491 CDS YP_051124.1 50121957 2884725 3390849..3391448 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2559/y1627 ypo2559 or y1627 SWALL:YP59_YERPE (SWALL:Q8ZDK3) (197 aa) fasta scores: E(): 9.8e-62, 85.56% id in 194 aa, and to Photorhabdus temperata b2291 SWALL:AAN08356 (EMBL:AY137386) (199 aa) fasta scores: E(): 4.2e-61, 83.33% id in 198 aa; hypothetical protein 3391448 2884725 ECA3034 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051124.1 3390849 D 218491 CDS YP_051125.1 50121958 2884805 complement(3391478..3393361) 1 NC_004547.2 Similar to Yersinia pestis ion transport protein ypo2561 SWALL:Q8ZDK1 (EMBL:AJ414152) (610 aa) fasta scores: E(): 1e-192, 80.65% id in 610 aa, and to Photorhabdus temperata YfbS SWALL:AAN08357 (EMBL:AY137386) (585 aa) fasta scores: E(): 5.6e-181, 78.63% id in 585 aa; sodium/sulfate transporter 3393361 2884805 ECA3035 Pectobacterium atrosepticum SCRI1043 sodium/sulfate transporter YP_051125.1 3391478 R 218491 CDS YP_051126.2 161501872 2884806 complement(3393489..3394145) 1 NC_004547.2 Similar to Yersinia pestis haloacid dehalogenase-like hydrolase ypo2562 or y1625 SWALL:AAM85194 (EMBL:AJ414152) (220 aa) fasta scores: E(): 1.3e-56, 69.9% id in 216 aa, and to Shigella flexneri phosphatase yfbt or sf2369 SWALL:AAN43882 (EMBL:AE015253) (216 aa) fasta scores: E(): 1.4e-55, 68.83% id in 215 aa; phosphatase 3394145 2884806 ECA3036 Pectobacterium atrosepticum SCRI1043 phosphatase YP_051126.2 3393489 R 218491 CDS YP_051127.1 50121960 2884807 complement(3394166..3394660) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi cytoplasmic protein yfbu or stm2335 or sty2565 SWALL:Q8XGJ0 (EMBL:AE008805) (164 aa) fasta scores: E(): 4.1e-58, 87.19% id in 164 aa, and to Yersinia pestis hypothetical protein Ypo2563 SWALL:Q8ZDJ9 (EMBL:AJ414152) (164 aa) fasta scores: E(): 8.8e-58, 82.92% id in 164 aa; hypothetical protein 3394660 2884807 ECA3037 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051127.1 3394166 R 218491 CDS YP_051128.1 50121961 2884808 complement(3394826..3395281) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2564 or y1623 SWALL:YP64_YERPE (SWALL:Q8ZDJ8) (151 aa) fasta scores: E(): 2.9e-52, 79.47% id in 151 aa, and to Photorhabdus temperata b2295 SWALL:AAN08358 (EMBL:AY137386) (151 aa) fasta scores: E(): 1.6e-45, 69.53% id in 151 aa; hypothetical protein 3395281 2884808 ECA3038 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051128.1 3394826 R 218491 CDS YP_051129.1 50121962 2884797 3395711..3396913 1 NC_004547.2 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 3396913 ackA 2884797 ackA Pectobacterium atrosepticum SCRI1043 acetate kinase YP_051129.1 3395711 D 218491 CDS YP_051130.1 50121963 2881866 3396993..3399131 1 NC_004547.2 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; phosphate acetyltransferase 3399131 pta 2881866 pta Pectobacterium atrosepticum SCRI1043 phosphate acetyltransferase YP_051130.1 3396993 D 218491 CDS YP_051131.1 50121964 2884933 3399252..3400112 1 NC_004547.2 Similar to Agrobacterium tumefaciens hypothetical protein atu1921 or agr_c_3514 SWALL:Q8UE42 (EMBL:AE009146) (298 aa) fasta scores: E(): 8.5e-88, 72.9% id in 262 aa, and to Pasteurella multocida hypothetical protein Pm1172 SWALL:Q9CLP5 (EMBL:AE006157) (281 aa) fasta scores: E(): 4.8e-85, 73.74% id in 259 aa; hypothetical protein 3400112 2884933 ECA3041 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051131.1 3399252 D 218491 CDS YP_051132.1 50121965 2884934 complement(3400193..3400873) 1 NC_004547.2 Similar to Yersinia pestis NUDIX hydrolase ypo2781 or y1614 SWALL:YR81_YERPE (SWALL:Q8ZD12) (182 aa) fasta scores: E(): 1.1e-56, 80.66% id in 181 aa, and to Salmonella typhimurium, and Salmonella typhi NUDIX hydrolase yfcd or stm2346 or sty2576 SWALL:YFCD_SALTY (SWALL:Q8XFF7) (184 aa) fasta scores: E(): 1.4e-55, 82.08% id in 173 aa; NUDIX hydrolase 3400873 2884934 ECA3042 Pectobacterium atrosepticum SCRI1043 NUDIX hydrolase YP_051132.1 3400193 R 218491 CDS YP_051133.1 50121966 2884935 complement(3400997..3401548) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi phosphoesterase yfce or stm2347 or sty2577 SWALL:Q8XGM7 (EMBL:AE008805) (183 aa) fasta scores: E(): 5.3e-49, 71.27% id in 181 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein yfce or b2300 or c2843 or z3562 or ecs3184 SWALL:YFCE_ECOLI (SWALL:P76495) (184 aa) fasta scores: E(): 1.1e-50, 72.37% id in 181 aa; phosphodiesterase 3401548 2884935 ECA3043 Pectobacterium atrosepticum SCRI1043 phosphodiesterase YP_051133.1 3400997 R 218491 CDS YP_051134.1 50121967 2885697 3401812..3402438 1 NC_004547.2 Similar to Salmonella typhimurium glutathione S-transferase yfcg or stm2349 SWALL:Q8ZNC9 (EMBL:AE008805) (215 aa) fasta scores: E(): 2.4e-60, 71.98% id in 207 aa, and to Escherichia coli hypothetical GST-like protein yfcg or b2302 SWALL:YFCG_ECOLI (SWALL:P77526) (215 aa) fasta scores: E(): 5.7e-59, 71.01% id in 207 aa; glutathione-S transferase 3402438 2885697 ECA3044 Pectobacterium atrosepticum SCRI1043 glutathione-S transferase YP_051134.1 3401812 D 218491 CDS YP_051135.1 50121968 2885250 3402596..3402967 1 NC_004547.2 catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase 3402967 folX 2885250 folX Pectobacterium atrosepticum SCRI1043 D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase YP_051135.1 3402596 D 218491 CDS YP_051136.1 50121969 2885698 3402984..3403889 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo2778 SWALL:Q8ZD15 (EMBL:AJ414153) (302 aa) fasta scores: E(): 1.1e-82, 71% id in 300 aa, and to Salmonella typhi hypothetical protein Sty2580 sty2580 SWALL:Q8Z512 (EMBL:AL627274) (297 aa) fasta scores: E(): 2.6e-78, 65.77% id in 298 aa; hypothetical protein 3403889 2885698 ECA3046 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051136.1 3402984 D 218491 CDS YP_051137.1 50121970 2881716 complement(3404058..3404831) 1 NC_004547.2 Similar to Escherichia coli histidine transport ATP-binding protein HisP or b2306 SWALL:HISP_ECOLI (SWALL:P07109) (257 aa) fasta scores: E(): 1.5e-73, 82.87% id in 257 aa; histidine/lysine/arginine/ornithine transporter subunit 3404831 hisP 2881716 hisP Pectobacterium atrosepticum SCRI1043 histidine/lysine/arginine/ornithine transporter subunit YP_051137.1 3404058 R 218491 CDS YP_051138.1 50121971 2881715 complement(3404848..3405564) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri histidine transport system permease protein HisM or b2307 or c2849 or z3569 or ecs3191 or sf2383 SWALL:HISM_ECOLI (SWALL:P20091) (238 aa) fasta scores: E(): 2.8e-79, 79.41% id in 238 aa; histidine ABC transporter permease 3405564 hisM 2881715 hisM Pectobacterium atrosepticum SCRI1043 histidine ABC transporter permease YP_051138.1 3404848 R 218491 CDS YP_051139.1 50121972 2881717 complement(3405557..3406246) 1 NC_004547.2 Similar to Escherichia coli histidine transport system permease protein HisQ or b2308 SWALL:HISQ_ECOLI (SWALL:P52094) (228 aa) fasta scores: E(): 3.5e-63, 74.44% id in 227 aa; histidine ABC transporter permease 3406246 hisQ 2881717 hisQ Pectobacterium atrosepticum SCRI1043 histidine ABC transporter permease YP_051139.1 3405557 R 218491 CDS YP_051140.1 50121973 2881714 complement(3406395..3407174) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 histidine-binding periplasmic protein precursor HisJ or b2309 or c2851 or z3571 or ecs3193 SWALL:HISJ_ECOLI (SWALL:P39182) (260 aa) fasta scores: E(): 1.8e-69, 73.28% id in 262 aa; histidine-binding periplasmic protein 3407174 hisJ 2881714 hisJ Pectobacterium atrosepticum SCRI1043 histidine-binding periplasmic protein YP_051140.1 3406395 R 218491 CDS YP_051141.1 50121974 2884211 complement(3407589..3408161) 1 NC_004547.2 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 3408161 ubiX 2884211 ubiX Pectobacterium atrosepticum SCRI1043 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_051141.1 3407589 R 218491 CDS YP_051142.1 50121975 2881326 complement(3408341..3409858) 1 NC_004547.2 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 3409858 purF 2881326 purF Pectobacterium atrosepticum SCRI1043 amidophosphoribosyltransferase YP_051142.1 3408341 R 218491 CDS YP_051143.1 50121976 2883325 complement(3409880..3410380) 1 NC_004547.2 membrane protein required for colicin V production; colicin V production protein 3410380 cvpA 2883325 cvpA Pectobacterium atrosepticum SCRI1043 colicin V production protein YP_051143.1 3409880 R 218491 CDS YP_051144.1 50121977 2881919 complement(3410557..3411267) 1 NC_004547.2 Similar to Yersinia pestis membrane protein DedD or ypo2770 SWALL:Q8ZD23 (EMBL:AJ414153) (240 aa) fasta scores: E(): 2.2e-30, 60.49% id in 243 aa, and to Escherichia coli DedD protein dedd or b2314 SWALL:DEDD_ECOLI (SWALL:P09549) (220 aa) fasta scores: E(): 1e-15, 58.97% id in 234 aa; hypothetical protein 3411267 dedD 2881919 dedD Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051144.1 3410557 R 218491 CDS YP_051145.1 50121978 2882082 complement(3411257..3412525) 1 NC_004547.2 Similar to Escherichia coli folc bifunctional protein [includes: folylpolyglutamate synthase and dihydrofolate synthase] FolC or DedC or b2315 SWALL:FOLC_ECOLI (SWALL:P08192) (422 aa) fasta scores: E(): 6e-112, 69.47% id in 416 aa; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 3412525 folC 2882082 folC Pectobacterium atrosepticum SCRI1043 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_051145.1 3411257 R 218491 CDS YP_051146.1 50121979 2885204 complement(3412631..3413548) 1 NC_004547.2 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 3413548 accD 2885204 accD Pectobacterium atrosepticum SCRI1043 acetyl-CoA carboxylase subunit beta YP_051146.1 3412631 R 218491 CDS YP_051147.1 50121980 2884758 complement(3413773..3414435) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 deda protein DedA or b2317 or z3579 or ecs3201 SWALL:DEDA_ECOLI (SWALL:P09548) (219 aa) fasta scores: E(): 2.8e-75, 86.11% id in 216 aa, and to Salmonella typhimurium, and Salmonella typhi DedA family protein or stm2367 or sty2598 SWALL:Q8XEL7 (EMBL:AE008806) (219 aa) fasta scores: E(): 1.5e-75, 86.11% id in 216 aa; hypothetical protein 3414435 dedA 2884758 dedA Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051147.1 3413773 R 218491 CDS YP_051148.1 50121981 2884233 complement(3414618..3415469) 1 NC_004547.2 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 3415469 truA 2884233 truA Pectobacterium atrosepticum SCRI1043 tRNA pseudouridine synthase A YP_051148.1 3414618 R 218491 CDS YP_051149.1 50121982 2885699 complement(3415469..3416479) 1 NC_004547.2 Similar to Shewanella violacea aspartate-semialdehyde dehydrogenase Asd SWALL:DHAS_SHEVI (SWALL:Q56734) (338 aa) fasta scores: E(): 1.3e-55, 45.1% id in 337 aa, and to Yersinia pestis aspartate-semialdehyde dehydrogenase Asd or ypo2765 or usg or y1598 SWALL:Q8ZD28 (EMBL:AJ414153) (336 aa) fasta scores: E(): 2.8e-104, 80.59% id in 335 aa; semialdehyde dehydrogenase 3416479 2885699 ECA3059 Pectobacterium atrosepticum SCRI1043 semialdehyde dehydrogenase YP_051149.1 3415469 R 218491 CDS YP_051150.1 50121983 2882127 complement(3416595..3417731) 1 NC_004547.2 catalyzes the formation of 3-hydroxy-4-phospho-hydroxy-alpha-ketobutyrate from erythronate-4-phosphate; erythronate-4-phosphate dehydrogenase 3417731 pdxB 2882127 pdxB Pectobacterium atrosepticum SCRI1043 erythronate-4-phosphate dehydrogenase YP_051150.1 3416595 R 218491 CDS YP_051151.1 50121984 2885762 3418053..3418931 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo2761 or y1595 SWALL:Q8ZD31 (EMBL:AJ414153) (305 aa) fasta scores: E(): 9.2e-76, 68.62% id in 290 aa, and to Pseudomonas putida membrane protein, pp4853 SWALL:AAN70422 (EMBL:AE016792) (293 aa) fasta scores: E(): 2e-50, 48.62% id in 290 aa; hypothetical protein 3418931 2885762 ECA3061 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051151.1 3418053 D 218491 CDS YP_051152.1 50121985 2882535 3419025..3420278 1 NC_004547.2 Similar to Yersinia pestis flagellar assembly regulatory protein, flk or ypo2760 or div or y1594 SWALL:AAM85163 (EMBL:AJ414153) (345 aa) fasta scores: E(): 6.1e-30, 39.47% id in 418 aa, and to Escherichia coli div protein div or b2321 SWALL:DIV_ECOLI (SWALL:P15286) (331 aa) fasta scores: E(): 3.4e-21, 31.19% id in 420 aa; flagella assembly protein 3420278 flk 2882535 flk Pectobacterium atrosepticum SCRI1043 flagella assembly protein YP_051152.1 3419025 D 218491 CDS YP_051153.1 50121986 2883911 complement(3420405..3421622) 1 NC_004547.2 FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 3421622 fabB 2883911 fabB Pectobacterium atrosepticum SCRI1043 3-oxoacyl-ACP synthase YP_051153.1 3420405 R 218491 CDS YP_051154.1 50121987 2885763 3421795..3423822 1 NC_004547.2 catalyzes the formation of 5-methylaminomethyl-2-thiouridine in position 34 of the anticodon of tRNA molecules; 5-methylaminomethyl-2-thiouridine methyltransferase 3423822 mnmC 2885763 mnmC Pectobacterium atrosepticum SCRI1043 5-methylaminomethyl-2-thiouridine methyltransferase YP_051154.1 3421795 D 218491 CDS YP_051155.1 50121988 2885764 complement(3423889..3424173) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo2755 SWALL:Q8ZD37 (EMBL:AJ414153) (92 aa) fasta scores: E(): 6.4e-25, 75% id in 92 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein yfcl or b2325 or z3588 or ecs3209 SWALL:YFCL_ECOLI (SWALL:P76496) (92 aa) fasta scores: E(): 1.3e-20, 67.41% id in 89 aa; hypothetical protein 3424173 2885764 ECA3065 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051155.1 3423889 R 218491 CDS YP_051156.1 50121989 2885765 complement(3424208..3424753) 1 NC_004547.2 Similar to Salmonella typhimurium cytoplasmic protein yfcm or stm2381 SWALL:Q8ZNB1 (EMBL:AE008807) (182 aa) fasta scores: E(): 5.4e-64, 77.9% id in 181 aa, and to Shigella flexneri transporting ATPase yfcm or sf2402 SWALL:AAN43915 (EMBL:AE015256) (182 aa) fasta scores: E(): 6.4e-64, 77.9% id in 181 aa; hypothetical protein 3424753 2885765 ECA3066 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051156.1 3424208 R 218491 CDS YP_051157.1 50121990 2884095 complement(3424782..3425582) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo2753 or y1587 SWALL:Q8ZD39 (EMBL:AJ414153) (268 aa) fasta scores: E(): 2e-74, 73.48% id in 264 aa, and to Salmonella typhimurium, and Salmonella typhi permease yfca or stm2382 or sty2614 SWALL:Q8XEQ5 (EMBL:AE008807) (269 aa) fasta scores: E(): 5.2e-72, 71.37% id in 262 aa; hypothetical protein 3425582 2884095 ECA3067 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051157.1 3424782 R 218491 CDS YP_051158.1 50121991 2885721 complement(3425592..3426437) 1 NC_004547.2 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; penicillin-insensitive murein endopeptidase 3426437 mepA 2885721 mepA Pectobacterium atrosepticum SCRI1043 penicillin-insensitive murein endopeptidase YP_051158.1 3425592 R 218491 CDS YP_051159.1 50121992 2884133 complement(3426443..3427528) 1 NC_004547.2 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 3427528 aroC 2884133 aroC Pectobacterium atrosepticum SCRI1043 chorismate synthase YP_051159.1 3426443 R 218491 CDS YP_051160.1 50121993 2884096 complement(3427616..3428548) 1 NC_004547.2 involved in methylation of ribosomal protein L3; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 3428548 2884096 ECA3070 Pectobacterium atrosepticum SCRI1043 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_051160.1 3427616 R 218491 CDS YP_051161.1 50121994 2884097 3428721..3429263 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri hypothetical protein yfcn or b2331 or c2877 or sf2406 SWALL:YFCN_ECOLI (SWALL:P77458) (183 aa) fasta scores: E(): 2.2e-54, 73.71% id in 175 aa, and to Salmonella typhimurium, and Salmonella typhi hypothetical protein yfcn or stm2386 or sty2618 SWALL:YFCN_SALTY (SWALL:Q8XFE8) (183 aa) fasta scores: E(): 3e-54, 73.14% id in 175 aa; hypothetical protein 3429263 2884097 ECA3071 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051161.1 3428721 D 218491 CDS YP_051162.1 50121995 2884388 complement(3429348..3429830) 1 NC_004547.2 Similar to Escherichia coli phosphohistidine phosphatase SixA or b2340 SWALL:SIXA_ECOLI (SWALL:P76502) (161 aa) fasta scores: E(): 6.1e-35, 66.02% id in 156 aa; phosphohistidine phosphatase 3429830 sixA 2884388 sixA Pectobacterium atrosepticum SCRI1043 phosphohistidine phosphatase YP_051162.1 3429348 R 218491 CDS YP_051163.1 50121996 2883981 3430851..3431399 1 NC_004547.2 Similar to Myxococcus xanthus protein U precursor Pru SWALL:PRU_MYXXA (SWALL:P27755) (179 aa) fasta scores: E(): 1.8e-07, 29.57% id in 186 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4648 SWALL:Q9HVE4 (EMBL:AE004879) (182 aa) fasta scores: E(): 4.5e-18, 39.78% id in 186 aa; hypothetical protein 3431399 2883981 ECA3073 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051163.1 3430851 D 218491 CDS YP_051164.1 50121997 2883982 3431576..3432112 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo1698 SWALL:Q8ZFK5 (EMBL:AJ414150) (185 aa) fasta scores: E(): 3.6e-15, 33.88% id in 180 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4650 SWALL:Q9HVE2 (EMBL:AE004879) (180 aa) fasta scores: E(): 7.9e-30, 55.26% id in 152 aa; hypothetical protein 3432112 2883982 ECA3074 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051164.1 3431576 D 218491 CDS YP_051165.1 50121998 2883983 3432149..3432922 1 NC_004547.2 Similar to Pseudomonas aeruginosa probable pili assembly chaperone pa4651 SWALL:Q9HVE1 (EMBL:AE004879) (262 aa) fasta scores: E(): 1.3e-45, 49.78% id in 237 aa, and to Pseudomonas putida type 1 pili usher pathway chaperone CsuC or pp2361 SWALL:AAN67974 (EMBL:AE016782) (264 aa) fasta scores: E(): 8.6e-40, 45.6% id in 239 aa; fimbrial chaperone 3432922 2883983 ECA3075 Pectobacterium atrosepticum SCRI1043 fimbrial chaperone YP_051165.1 3432149 D 218491 CDS YP_051166.1 50121999 2883984 3432966..3435347 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein Pa4652 SWALL:Q9HVE0 (EMBL:AE004879) (790 aa) fasta scores: E(): 1.3e-148, 51.74% id in 775 aa, and to Pseudomonas putida type 1 pili usher protein CsuD or pp2362 SWALL:AAN67975 (EMBL:AE016782) (797 aa) fasta scores: E(): 1.6e-125, 43.44% id in 778 aa; fimbrial usher protein 3435347 2883984 ECA3076 Pectobacterium atrosepticum SCRI1043 fimbrial usher protein YP_051166.1 3432966 D 218491 CDS YP_051167.1 50122000 2883877 3435352..3436362 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein Pa4653 SWALL:Q9HVD9 (EMBL:AE004879) (315 aa) fasta scores: E(): 3.6e-55, 47.2% id in 322 aa, and to Yersinia pestis membrane protein ypo1695 or y1857 SWALL:Q8ZFK8 (EMBL:AJ414150) (329 aa) fasta scores: E(): 7.2e-33, 36.95% id in 341 aa; hypothetical protein 3436362 2883877 ECA3077 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051167.1 3435352 D 218491 CDS YP_051168.1 50122001 2883878 complement(3436355..3438550) 1 NC_004547.2 multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate; multifunctional fatty acid oxidation complex subunit alpha 3438550 fadJ 2883878 fadJ Pectobacterium atrosepticum SCRI1043 multifunctional fatty acid oxidation complex subunit alpha YP_051168.1 3436355 R 218491 CDS YP_051169.1 50122002 2883879 complement(3438547..3439860) 1 NC_004547.2 FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth; 3-ketoacyl-CoA thiolase 3439860 fadI 2883879 fadI Pectobacterium atrosepticum SCRI1043 3-ketoacyl-CoA thiolase YP_051169.1 3438547 R 218491 CDS YP_051170.1 50122003 2883755 complement(3440099..3440395) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo2745 SWALL:Q8ZD47 (EMBL:AJ414153) (98 aa) fasta scores: E(): 5.1e-27, 74.48% id in 98 aa, and to Escherichia coli, and Escherichia coli O6 hypothetical protein yfcz or b2343 or c2888 SWALL:YFCZ_ECOLI (SWALL:P76504) (94 aa) fasta scores: E(): 7.5e-25, 69.14% id in 94 aa; hypothetical protein 3440395 2883755 ECA3080 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051170.1 3440099 R 218491 CDS YP_051171.1 50122004 2883501 3440778..3442064 1 NC_004547.2 Similar to Escherichia coli long-chain fatty acid transport protein precursor FadL or Ttr or b2344 SWALL:FADL_ECOLI (SWALL:P10384) (448 aa) fasta scores: E(): 1.4e-45, 64.25% id in 456 aa, and to Yersinia pestis long-chain fatty acid transport protein FadL or ypo2744 SWALL:Q8ZD48 (EMBL:AJ414153) (423 aa) fasta scores: E(): 2.5e-128, 72.19% id in 428 aa; long-chain fatty acid outer membrane transporter 3442064 fadL 2883501 fadL Pectobacterium atrosepticum SCRI1043 long-chain fatty acid outer membrane transporter YP_051171.1 3440778 D 218491 CDS YP_051172.1 50122005 2881697 complement(3442200..3443783) 1 NC_004547.2 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 3443783 mqo 2881697 mqo Pectobacterium atrosepticum SCRI1043 malate:quinone oxidoreductase YP_051172.1 3442200 R 218491 CDS YP_051173.1 50122006 2882868 complement(3444146..3444907) 1 NC_004547.2 Similar to Shigella flexneri VacJ lipoprotein precursor VacJ or sf2424 SWALL:VACJ_SHIFL (SWALL:P43262) (251 aa) fasta scores: E(): 1.2e-75, 71.71% id in 251 aa, and to Yersinia pestis vacj lipoprotein VacJ or ypo2743 SWALL:Q8ZD49 (EMBL:AJ414153) (254 aa) fasta scores: E(): 3.3e-80, 76.68% id in 253 aa; lipoprotein 3444907 vacJ 2882868 vacJ Pectobacterium atrosepticum SCRI1043 lipoprotein YP_051173.1 3444146 R 218491 CDS YP_051174.1 50122007 2883756 3445525..3446463 1 NC_004547.2 Similar to Salmonella typhi membrane protein sty2625 SWALL:Q8Z4Y7 (EMBL:AL627274) (313 aa) fasta scores: E(): 4.1e-76, 65.06% id in 312 aa, and to Escherichia coli O157:H7 transport yfdc or z3611 or ecs3230 SWALL:Q8XCN1 (EMBL:AE005466) (310 aa) fasta scores: E(): 8.4e-76, 66% id in 300 aa; hypothetical protein 3446463 2883756 ECA3084 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051174.1 3445525 D 218491 CDS YP_051175.1 50122008 2883757 complement(3446735..3447037) 1 NC_004547.2 Similar to Synechocystis sp. hypothetical protein Slr1025 SWALL:YA25_SYNY3 (SWALL:P73136) (112 aa) fasta scores: E(): 2.2e-12, 45.37% id in 108 aa, and to Streptococcus agalactiae hypothetical protein gbs1656 SWALL:CAD47315 (EMBL:AL766852) (92 aa) fasta scores: E(): 7.9, 29.11% id in 79 aa; hypothetical protein 3447037 2883757 ECA3085 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051175.1 3446735 R 218491 CDS YP_051176.1 50122009 2883221 3447150..3447599 1 NC_004547.2 Similar to Vibrio cholerae acetyltransferase, vca0479 and vca0400 SWALL:Q9K2Q6 (EMBL:AE004379) (151 aa) fasta scores: E(): 0.00011, 27.53% id in 138 aa, and to Ralstonia solanacearum hypothetical protein rsc0120 or rs00990 SWALL:Q8Y361 (EMBL:AL646057) (164 aa) fasta scores: E(): 0.00012, 31.03% id in 145 aa; acetyltransferase 3447599 2883221 ECA3086 Pectobacterium atrosepticum SCRI1043 acetyltransferase YP_051176.1 3447150 D 218491 CDS YP_051177.1 50122010 2883222 complement(3447795..3448586) 1 NC_004547.2 Similar to Phytophthora parasitica necrosis-inducing protein Npp1 SWALL:Q9AT28 (EMBL:AF352031) (237 aa) fasta scores: E(): 1.9e-07, 31.1% id in 209 aa, and to Vibrio sp. CH-291 hypothetical 29.6 kDa protein SWALL:Q93IK1 (EMBL:AJ314791) (261 aa) fasta scores: E(): 9.1e-59, 55.98% id in 259 aa, and to Fusarium oxysporum f. sp. erythroxyli necrosis and ethylene inducing peptide Nep1 SWALL:O42737 (EMBL:AF036580) (253 aa) fasta scores: E(): 3.4e-06, 27.27% id in 231 aa; hypothetical protein 3448586 2883222 ECA3087 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051177.1 3447795 R 218491 CDS YP_051178.1 50122011 2883223 complement(3448807..3449568) 1 NC_004547.2 Weakly similar to Influenzavirus A neuraminidase SWALL:Q67222 (EMBL:D31948) (470 aa) fasta scores: E(): 10, 19.24% id in 265 aa; hypothetical protein 3449568 2883223 ECA3088 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051178.1 3448807 R 218491 CDS YP_051179.1 50122012 2883224 complement(3449697..3450047) 1 NC_004547.2 hypothetical protein 3450047 2883224 ECA3089 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051179.1 3449697 R 218491 CDS YP_051180.1 50122013 2883030 3450488..3451027 1 NC_004547.2 Weakly similar to the C-terminal region of Pseudomonas putida transcriptional regulator, cro/ci family pp0852 SWALL:AAN66477 (EMBL:AE016777) (335 aa) fasta scores: E(): 7.3, 28.69% id in 115 aa; hypothetical protein 3451027 2883030 ECA3090 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051180.1 3450488 D 218491 CDS YP_051181.1 50122014 2883031 complement(3451132..3451704) 1 NC_004547.2 Similar to Ralstonia solanacearum hypothetical protein rsc1344 or rs02866 SWALL:Q8XZQ1 (EMBL:AL646064) (222 aa) fasta scores: E(): 2.8e-26, 42.35% id in 170 aa, and to Brucella suis conserved hypothetical protein br0845 SWALL:AAN29774 (EMBL:AE014388) (188 aa) fasta scores: E(): 3.5e-21, 33.88% id in 180 aa; hypothetical protein 3451704 2883031 ECA3091 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051181.1 3451132 R 218491 CDS YP_051182.1 50122015 2884898 complement(3451774..3453156) 1 NC_004547.2 exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; ATP-dependent RNA helicase DbpA 3453156 dbpA 2884898 dbpA Pectobacterium atrosepticum SCRI1043 ATP-dependent RNA helicase DbpA YP_051182.1 3451774 R 218491 CDS YP_051183.1 50122016 2883032 complement(3453277..3454011) 1 NC_004547.2 Similar to Salmonella typhimurium molybdenum-binding periplasmic protein stm3141 SWALL:Q8ZM20 (EMBL:AE008844) (236 aa) fasta scores: E(): 1e-26, 40.25% id in 236 aa, and to Pasteurella multocida hypothetical protein Pm1146 SWALL:YB46_PASMU (SWALL:P57911) (241 aa) fasta scores: E(): 2e-26, 37.65% id in 239 aa; molybdate ABC transporter periplasmic molybdate-binding protein 3454011 2883032 ECA3093 Pectobacterium atrosepticum SCRI1043 molybdate ABC transporter periplasmic molybdate-binding protein YP_051183.1 3453277 R 218491 CDS YP_051184.1 50122017 2884186 complement(3454008..3454778) 1 NC_004547.2 Similar to Haemophilus influenzae hypothetical ABC transporter ATP-binding protein Hi1470 SWALL:YE70_HAEIN (SWALL:Q57399) (253 aa) fasta scores: E(): 9.5e-36, 46.12% id in 245 aa, and to Pasteurella multocida hypothetical protein Pm1147 SWALL:Q9CLR4 (EMBL:AE006155) (246 aa) fasta scores: E(): 1.2e-38, 47.22% id in 252 aa; ABC transporter ATP-binding protein 3454778 2884186 ECA3094 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_051184.1 3454008 R 218491 CDS YP_051185.1 50122018 2884187 complement(3454780..3455799) 1 NC_004547.2 Similar to Haemophilus influenzae hypothetical ABC transporter permease protein Hi1471 SWALL:YE71_HAEIN (SWALL:Q57130) (337 aa) fasta scores: E(): 3e-65, 53.86% id in 336 aa, and to Pasteurella multocida hypothetical protein Pm1148 SWALL:Q9CLR3 (EMBL:AE006155) (340 aa) fasta scores: E(): 7.2e-70, 57.44% id in 329 aa; ABC transporter permease 3455799 2884187 ECA3095 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_051185.1 3454780 R 218491 CDS YP_051186.1 50122019 2884188 complement(3455796..3456860) 1 NC_004547.2 Similar to Salmonella typhi possible ABC-transport protein, periplasmic-binding component sty3313 SWALL:Q8Z3R3 (EMBL:AL627277) (350 aa) fasta scores: E(): 6.1e-84, 64.84% id in 347 aa, and to Pasteurella multocida hypothetical protein Pm1149 SWALL:Q9CLR2 (EMBL:AE006155) (350 aa) fasta scores: E(): 3.1e-90, 71.85% id in 334 aa; ABC-transporter periplasmic-binding protein 3456860 2884188 ECA3096 Pectobacterium atrosepticum SCRI1043 ABC-transporter periplasmic-binding protein YP_051186.1 3455796 R 218491 CDS YP_051187.1 50122020 2884189 3457211..3458236 1 NC_004547.2 Similar to Agrobacterium tumefaciens monooxygenase atu4121 or agr_l_1468 SWALL:Q8U8H1 (EMBL:AE009343) (340 aa) fasta scores: E(): 2.4e-113, 82.94% id in 340 aa, and to Brucella melitensis alkanal monooxygenase alpha chain bmei0017 SWALL:Q8YJR5 (EMBL:AE009445) (340 aa) fasta scores: E(): 6.4e-113, 82.05% id in 340 aa; monooxygenase 3458236 2884189 ECA3097 Pectobacterium atrosepticum SCRI1043 monooxygenase YP_051187.1 3457211 D 218491 CDS YP_051188.1 50122021 2882221 complement(3458845..3459693) 1 NC_004547.2 Similar to Erwinia carotovora type 4 prepilin-like proteins leader peptide processing enzyme OutO SWALL:LEP4_ERWCA (SWALL:P31712) (279 aa) fasta scores: E(): 1.8e-104, 89.71% id in 282 aa, and to Erwinia chrysanthemi type 4 prepilin-like proteins leader peptide processing enzyme OutO SWALL:LEP4_ERWCH (SWALL:P31711) (283 aa) fasta scores: E(): 4.6e-73, 61.51% id in 278 aa; type 4 prepilin-like proteins leader peptide processing protein 3459693 outO 2882221 outO Pectobacterium atrosepticum SCRI1043 type 4 prepilin-like proteins leader peptide processing protein YP_051188.1 3458845 R 218491 CDS YP_051189.1 50122022 2882220 complement(3459817..3460563) 1 NC_004547.2 Similar to Erwinia carotovora general secretion pathway protein N OutN SWALL:GSPN_ERWCA (SWALL:P31710) (248 aa) fasta scores: E(): 3e-88, 88.71% id in 248 aa, and to Klebsiella pneumoniae general secretion pathway protein N PulN SWALL:GSPN_KLEPN (SWALL:P15753) (252 aa) fasta scores: E(): 2.5e-26, 35.88% id in 248 aa; general secretion pathway protein N 3460563 outN 2882220 outN Pectobacterium atrosepticum SCRI1043 general secretion pathway protein N YP_051189.1 3459817 R 218491 CDS YP_051190.1 50122023 2882204 complement(3460553..3461047) 1 NC_004547.2 Similar to Erwinia carotovora general secretion pathway protein M OutM SWALL:GSPM_ERWCA (SWALL:P31709) (164 aa) fasta scores: E(): 6.7e-54, 87.19% id in 164 aa, and to Erwinia chrysanthemi general secretion pathway protein M OutM SWALL:GSPM_ERWCH (SWALL:Q47422) (161 aa) fasta scores: E(): 3.1e-28, 52.5% id in 160 aa; general secretion pathway protein M 3461047 outM 2882204 outM Pectobacterium atrosepticum SCRI1043 general secretion pathway protein M YP_051190.1 3460553 R 218491 CDS YP_051191.1 50122024 2882203 complement(3461044..3462321) 1 NC_004547.2 Similar to Erwinia carotovora general secretion pathway protein L OutL SWALL:GSPL_ERWCA (SWALL:P31708) (425 aa) fasta scores: E(): 3e-165, 94.11% id in 425 aa, and to Erwinia chrysanthemi general secretion pathway protein L OutL SWALL:GSPL_ERWCH (SWALL:P31707) (399 aa) fasta scores: E(): 9.7e-44, 53.51% id in 398 aa; general secretion pathway protein L 3462321 outL 2882203 outL Pectobacterium atrosepticum SCRI1043 general secretion pathway protein L YP_051191.1 3461044 R 218491 CDS YP_051192.1 50122025 2882202 complement(3462318..3463304) 1 NC_004547.2 Similar to Erwinia carotovora general secretion pathway protein K OutK SWALL:GSPK_ERWCA (SWALL:P31706) (328 aa) fasta scores: E(): 5.7e-125, 95.12% id in 328 aa, and to Erwinia chrysanthemi general secretion pathway protein K OutK SWALL:GSPK_ERWCH (SWALL:P24690) (354 aa) fasta scores: E(): 8.7e-44, 50.69% id in 359 aa; general secretion pathway protein K 3463304 outK 2882202 outK Pectobacterium atrosepticum SCRI1043 general secretion pathway protein K YP_051192.1 3462318 R 218491 CDS YP_051193.1 50122026 2882746 complement(3463301..3463951) 1 NC_004547.2 Similar to Erwinia carotovora general secretion pathway protein J precursor OutJ SWALL:GSPJ_ERWCA (SWALL:P31589) (216 aa) fasta scores: E(): 1e-74, 95.96% id in 198 aa, and to Erwinia chrysanthemi general secretion pathway protein J precursor OutJ SWALL:GSPJ_ERWCH (SWALL:P24689) (206 aa) fasta scores: E(): 3.8e-43, 60.82% id in 194 aa; general secretion pathway protein J 3463951 outJ 2882746 outJ Pectobacterium atrosepticum SCRI1043 general secretion pathway protein J YP_051193.1 3463301 R 218491 CDS YP_051194.1 50122027 2882745 complement(3463951..3464316) 1 NC_004547.2 Similar to Erwinia carotovora general secretion pathway protein I precursor OutI SWALL:GSPI_ERWCA (SWALL:P31588) (121 aa) fasta scores: E(): 1.4e-44, 94.21% id in 121 aa, and to Erwinia chrysanthemi general secretion pathway protein I precursor OutI SWALL:GSPI_ERWCH (SWALL:P24688) (125 aa) fasta scores: E(): 3.3e-27, 59.32% id in 118 aa; general secretion pathway protein I 3464316 outI 2882745 outI Pectobacterium atrosepticum SCRI1043 general secretion pathway protein I YP_051194.1 3463951 R 218491 CDS YP_051195.1 50122028 2882744 complement(3464313..3464879) 1 NC_004547.2 Similar to Erwinia carotovora general secretion pathway protein H precursor OutH SWALL:GSPH_ERWCA (SWALL:P31587) (188 aa) fasta scores: E(): 1.7e-68, 92.02% id in 188 aa, and to Erwinia chrysanthemi general secretion pathway protein H precursor OutH SWALL:GSPH_ERWCH (SWALL:P24687) (181 aa) fasta scores: E(): 7.3e-32, 52.24% id in 178 aa; general secretion pathway protein H 3464879 outH 2882744 outH Pectobacterium atrosepticum SCRI1043 general secretion pathway protein H YP_051195.1 3464313 R 218491 CDS YP_051196.1 50122029 2882812 complement(3464954..3465394) 1 NC_004547.2 Similar to Erwinia carotovora general secretion pathway protein G precursor OutG SWALL:GSPG_ERWCA (SWALL:P31586) (156 aa) fasta scores: E(): 2.3e-51, 97.88% id in 142 aa, and to Erwinia chrysanthemi general secretion pathway protein G precursor OutG SWALL:GSPG_ERWCH (SWALL:P31585) (153 aa) fasta scores: E(): 1.9e-42, 85.07% id in 134 aa; general secretion pathway protein G 3465394 outG 2882812 outG Pectobacterium atrosepticum SCRI1043 general secretion pathway protein G YP_051196.1 3464954 R 218491 CDS YP_051197.1 50122030 2882811 complement(3465462..3466688) 1 NC_004547.2 Similar to Erwinia carotovora general secretion pathway protein F OutF SWALL:GSPF_ERWCA (SWALL:P31705) (408 aa) fasta scores: E(): 7.6e-150, 96.56% id in 408 aa, and to Erwinia chrysanthemi general secretion pathway protein F OutF SWALL:GSPF_ERWCH (SWALL:P31704) (404 aa) fasta scores: E(): 1.2e-116, 77.39% id in 407 aa; general secretion pathway protein F 3466688 outF 2882811 outF Pectobacterium atrosepticum SCRI1043 general secretion pathway protein F YP_051197.1 3465462 R 218491 CDS YP_051198.1 50122031 2882810 complement(3466690..3468186) 1 NC_004547.2 Similar to Erwinia carotovora general secretion pathway protein E OutE SWALL:GSPE_ERWCA (SWALL:P31703) (498 aa) fasta scores: E(): 8e-167, 96.78% id in 498 aa, and to Erwinia chrysanthemi general secretion pathway protein E OutE SWALL:GSPE_ERWCH (SWALL:P31702) (498 aa) fasta scores: E(): 1.8e-140, 80.32% id in 498 aa; general secretion pathway protein E 3468186 outE 2882810 outE Pectobacterium atrosepticum SCRI1043 general secretion pathway protein E YP_051198.1 3466690 R 218491 CDS YP_051199.1 50122032 2882809 complement(3468183..3470135) 1 NC_004547.2 Similar to Erwinia carotovora general secretion pathway protein D precursor OutD SWALL:GSPD_ERWCA (SWALL:P31701) (650 aa) fasta scores: E(): 3e-215, 92.76% id in 650 aa, and to Klebsiella pneumoniae general secretion pathway protein D precursor PulD SWALL:GSPD_KLEPN (SWALL:P15644) (660 aa) fasta scores: E(): 1.9e-173, 74.31% id in 654 aa; general secretion pathway protein D 3470135 outD 2882809 outD Pectobacterium atrosepticum SCRI1043 general secretion pathway protein D YP_051199.1 3468183 R 218491 CDS YP_051200.1 50122033 2882709 complement(3470224..3471087) 1 NC_004547.2 Similar to Erwinia carotovora general secretion pathway protein C OutC SWALL:GSPC_ERWCA (SWALL:P31699) (285 aa) fasta scores: E(): 6.4e-96, 91.63% id in 287 aa, and to Erwinia chrysanthemi general secretion pathway protein C OutC SWALL:GSQC_ERWCH (SWALL:Q01564) (272 aa) fasta scores: E(): 1.5e-49, 52.01% id in 273 aa; general secretion pathway protein C 3471087 outC 2882709 outC Pectobacterium atrosepticum SCRI1043 general secretion pathway protein C YP_051200.1 3470224 R 218491 CDS YP_051201.1 50122034 2885349 complement(3471138..3473117) 1 NC_004547.2 Similar to Erwinia chrysanthemi exo-poly-alpha-D-galacturonosidase precursor PehX SWALL:PEHX_ERWCH (SWALL:P15922) (602 aa) fasta scores: E(): 1e-59, 48.5% id in 635 aa, and to Klebsiella oxytoca polygalacturonase PehX SWALL:Q8VP71 (EMBL:AY065648) (658 aa) fasta scores: E(): 2.7e-155, 60.63% id in 658 aa; exo-poly-alpha-D-galacturonosidase 3473117 pehX 2885349 pehX Pectobacterium atrosepticum SCRI1043 exo-poly-alpha-D-galacturonosidase YP_051201.1 3471138 R 218491 CDS YP_051202.1 50122035 2884170 complement(3473256..3474824) 1 NC_004547.2 Similar to Bacillus sp pectate lyase PelK SWALL:BAA05383 (EMBL:D26349) (420 aa) fasta scores: E(): 2.7e-35, 35.16% id in 472 aa, and to Erwinia chrysanthemi pectate lyase a precursor PelA SWALL:PELA_ERWCH (SWALL:P29155) (393 aa) fasta scores: E(): 1.1e-27, 31.9% id in 442 aa; pectate lyase 3474824 2884170 ECA3112 Pectobacterium atrosepticum SCRI1043 pectate lyase YP_051202.1 3473256 R 218491 CDS YP_051203.1 50122036 2882708 3475542..3476117 1 NC_004547.2 Similar to Erwinia chrysanthemi general secretion pathway protein B OutB SWALL:GSPB_ERWCH (SWALL:Q01563) (220 aa) fasta scores: E(): 8.7e-15, 42.85% id in 217 aa, and to Klebsiella pneumoniae general secretion pathway protein B PulB SWALL:GSPB_KLEPN (SWALL:P20725) (174 aa) fasta scores: E(): 1.5e-12, 38.06% id in 176 aa; general secretion pathway protein 3476117 outB 2882708 outB Pectobacterium atrosepticum SCRI1043 general secretion pathway protein YP_051203.1 3475542 D 218491 CDS YP_051204.1 50122037 2882222 complement(3476114..3476527) 1 NC_004547.2 Similar to Erwinia chrysanthemi OutS lipoprotein precursor OutS SWALL:OUTS_ERWCH (SWALL:Q01567) (133 aa) fasta scores: E(): 4.7e-24, 54.07% id in 135 aa, and to Klebsiella pneumoniae pullulanase secretion protein PulS precursor PulS SWALL:PULS_KLEPN (SWALL:P20440) (125 aa) fasta scores: E(): 7.5e-16, 47.93% id in 121 aa; general secretion pathway lipoprotein 3476527 outS 2882222 outS Pectobacterium atrosepticum SCRI1043 general secretion pathway lipoprotein YP_051204.1 3476114 R 218491 CDS YP_051205.1 50122038 2884171 complement(3476636..3477877) 1 NC_004547.2 Similar to Yersinia pestis aminotransferase ypo2975 or y1507 SWALL:AAM85078 (EMBL:AJ414154) (411 aa) fasta scores: E(): 4.2e-150, 92.57% id in 404 aa, and to Escherichia coli hypothetical aminotransferase yfdz or b2379 SWALL:YFDZ_ECOLI (SWALL:P77434) (412 aa) fasta scores: E(): 7.1e-147, 90.32% id in 403 aa; aminotransferase 3477877 2884171 ECA3115 Pectobacterium atrosepticum SCRI1043 aminotransferase YP_051205.1 3476636 R 218491 CDS YP_051206.1 50122039 2884172 3478244..3479224 1 NC_004547.2 Similar to Rhizobium loti probable muconate cycloisomerase mlr0803 SWALL:Q98LZ8 (EMBL:AP002995) (327 aa) fasta scores: E(): 7.8e-64, 52.97% id in 319 aa, and to Brucella suis mandelate racemase/muconate lactonizing enzyme family protein br1018 SWALL:AAN29940 (EMBL:AE014403) (326 aa) fasta scores: E(): 1.2e-63, 52.94% id in 323 aa; mandelate racemase/muconate lactonizing protein 3479224 2884172 ECA3116 Pectobacterium atrosepticum SCRI1043 mandelate racemase/muconate lactonizing protein YP_051206.1 3478244 D 218491 CDS YP_051207.1 50122040 2885142 3479267..3480127 1 NC_004547.2 Similar to Staphylococcus haemolyticus D-alanine aminotransferase Dat SWALL:DAAA_STAHA (SWALL:P54694) (282 aa) fasta scores: E(): 4.8e-36, 38.57% id in 280 aa, and to Agrobacterium tumefaciens D-alanine aminotransferase Dat or atu5473 or agr_pat_698 SWALL:Q8UJK4 (EMBL:AE008968) (290 aa) fasta scores: E(): 6.7e-61, 55.39% id in 278 aa; D-alanine aminotransferase 3480127 dat 2885142 dat Pectobacterium atrosepticum SCRI1043 D-alanine aminotransferase YP_051207.1 3479267 D 218491 CDS YP_051208.1 50122041 2884167 complement(3480208..3482655) 1 NC_004547.2 Similar to Pseudomonas putida membrane protein, pp0707 SWALL:AAN66332 (EMBL:AE016776) (855 aa) fasta scores: E(): 7.4e-106, 43.1% id in 798 aa, and to Xanthomonas campestris hypothetical protein Xcc0402 SWALL:Q8PDD8 (EMBL:AE012136) (821 aa) fasta scores: E(): 4e-50, 30.14% id in 806 aa, and to Erwinia chrysanthemi BspA protein precursor BspA SWALL:Q9EV03 (EMBL:AJ251781) (1106 aa) fasta scores: E(): 1.5e-22, 22.75% id in 813 aa; mechanosensitive ion channel protein 3482655 2884167 ECA3118 Pectobacterium atrosepticum SCRI1043 mechanosensitive ion channel protein YP_051208.1 3480208 R 218491 CDS YP_051209.1 50122042 2884168 complement(3483328..3484431) 1 NC_004547.2 hypothetical protein 3484431 2884168 ECA3119 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051209.1 3483328 R 218491 CDS YP_051210.1 50122043 2884094 complement(3484442..3486097) 1 NC_004547.2 Similar to Escherichia coli type i restriction enzyme EcoEI specificity protein HsdS or Hss SWALL:T1SE_ECOLI (SWALL:P19705) (594 aa) fasta scores: E(): 4.7e-62, 44.05% id in 606 aa, and to Salmonella enterica styski methylase HsdS SWALL:P95733 (EMBL:Y11005) (587 aa) fasta scores: E(): 6.2e-57, 40.95% id in 608 aa; subunit S of type I restriction-modification system 3486097 hsdS 2884094 hsdS Pectobacterium atrosepticum SCRI1043 subunit S of type I restriction-modification system YP_051210.1 3484442 R 218491 CDS YP_051211.1 50122044 2884092 complement(3486097..3487569) 1 NC_004547.2 Similar to Escherichia coli type I restriction enzyme EcoEI M protein HsdM SWALL:T1ME_ECOLI (SWALL:Q47282) (490 aa) fasta scores: E(): 6.2e-193, 97.55% id in 490 aa, and to Salmonella enterica styski methylase HsdM SWALL:P95732 (EMBL:Y11005) (493 aa) fasta scores: E(): 2e-178, 89.38% id in 490 aa; subunit M of type I restriction-modification system 3487569 hsdM 2884092 hsdM Pectobacterium atrosepticum SCRI1043 subunit M of type I restriction-modification system YP_051211.1 3486097 R 218491 CDS YP_051212.1 50122045 2884093 complement(3487642..3490068) 1 NC_004547.2 Similar to Escherichia coli type I restriction enzyme EcoEI R protein HsdR or Hsr SWALL:T1RE_ECOLI (SWALL:Q47281) (813 aa) fasta scores: E(): 0, 94.71% id in 813 aa, and to Pseudomonas putida type I restriction-modification system, R subunit hsdr or pp4740 SWALL:AAN70312 (EMBL:AE016791) (787 aa) fasta scores: E(): 3.5e-149, 61.76% id in 803 aa; type I restriction enzyme EcoEI R protein 3490068 hsdR 2884093 hsdR Pectobacterium atrosepticum SCRI1043 type I restriction enzyme EcoEI R protein YP_051212.1 3487642 R 218491 CDS YP_051213.1 50122046 2884169 complement(3490205..3490507) 1 NC_004547.2 hypothetical protein 3490507 2884169 ECA3123 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051213.1 3490205 R 218491 CDS YP_051214.1 50122047 2884119 3490764..3490928 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty3182 SWALL:Q8Z3Y7 (EMBL:AL627277) (132 aa) fasta scores: E(): 5.7e-05, 57.5% id in 40 aa, and to Shigella flexneri, and Shigella flexneri 2a stborf2 stborf2 or mvpA SWALL:O06662 (EMBL:U82621) (132 aa) fasta scores: E(): 0.00041, 55% id in 40 aa; hypothetical protein 3490928 2884119 ECA3124 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051214.1 3490764 D 218491 CDS YP_051215.1 50122048 2884120 3491089..3492066 1 NC_004547.2 Similar to Agrobacterium tumefaciens hypothetical protein atu3824 or agr_l_2017 SWALL:Q8U9A4 (EMBL:AE009313) (327 aa) fasta scores: E(): 1.1e-98, 76.14% id in 327 aa, and to Vibrio vulnificus conserved hypothetical protein vv20997 SWALL:AAO07909 (EMBL:AE016811) (366 aa) fasta scores: E(): 5.4e-97, 75.61% id in 324 aa; hypothetical protein 3492066 2884120 ECA3125 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051215.1 3491089 D 218491 CDS YP_051216.1 50122049 2883947 3492094..3493125 1 NC_004547.2 catalyzes the formation of tetrahydropteroyl-L-glutamate and methionine from L-homocysteine and 5-methyltetrahydropteroyltri-L-glutamate; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 3493125 metE 2883947 metE Pectobacterium atrosepticum SCRI1043 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_051216.1 3492094 D 218491 CDS YP_051217.1 50122050 2884121 complement(3493259..3493480) 1 NC_004547.2 Similar to Bos taurus acyl carrier protein, mitochondrial ndufab1 SWALL:ACPM_BOVIN (SWALL:P52505) (88 aa) fasta scores: E(): 0.18, 27.94% id in 68 aa, and to Fusobacterium nucleatum acyl carrier protein acpp or fn0150 SWALL:ACP_FUSNN (SWALL:Q8RGX5) (75 aa) fasta scores: E(): 1.9, 30.66% id in 75 aa; acyl carrier protein 3493480 2884121 ECA3127 Pectobacterium atrosepticum SCRI1043 acyl carrier protein YP_051217.1 3493259 R 218491 CDS YP_051218.1 50122051 2882952 complement(3493498..3494931) 1 NC_004547.2 Similar to Staphylococcus aureus D-alanine--poly(phosphoribitol) ligase subunit 1 DltA or mw0814 SWALL:DLTA_STAAW (SWALL:Q9S673) (485 aa) fasta scores: E(): 1.8e-42, 37.15% id in 471 aa, and to Lactococcus lactis D-alanine--poly(phosphoribitol) ligase subunit 1 DltA or ll1261 SWALL:DLTA_LACLA (SWALL:Q9CG49) (499 aa) fasta scores: E(): 1.3e-37, 32.03% id in 487 aa; D-alanine--poly(phosphoribitol) ligase subunit 1 3494931 dltA 2882952 dltA Pectobacterium atrosepticum SCRI1043 D-alanine--poly(phosphoribitol) ligase subunit 1 YP_051218.1 3493498 R 218491 CDS YP_051219.1 50122052 2882953 complement(3494928..3496046) 1 NC_004547.2 Similar to Bacillus subtilis protein DltB or ipa-4R SWALL:DLTB_BACSU (SWALL:P39580) (395 aa) fasta scores: E(): 3.9e-24, 31% id in 400 aa, and to Staphylococcus epidermidis DltB membrane protein se0625 SWALL:AAO04222 (EMBL:AE016746) (404 aa) fasta scores: E(): 1.1e-23, 28.9% id in 346 aa; peptidoglycan biosynthesis protein 3496046 dltB 2882953 dltB Pectobacterium atrosepticum SCRI1043 peptidoglycan biosynthesis protein YP_051219.1 3494928 R 218491 CDS YP_051220.1 50122053 2882798 complement(3496176..3497312) 1 NC_004547.2 Similar to Staphylococcus aureus, and Staphylococcus aureus exoprotein DltD or mw0817 SWALL:Q9S674 (EMBL:AF101234) (391 aa) fasta scores: E(): 0.028, 20.97% id in 391 aa, and to Staphylococcus aureus poly(glycerophosphate chain) D-alanine transfer protein DltD or sav0935 or sa0796 SWALL:Q99VE6 (EMBL:AP003360) (391 aa) fasta scores: E(): 0.028, 20.97% id in 391 aa; poly(glycerophosphate chain) D-alanine transfer protein 3497312 dltD 2882798 dltD Pectobacterium atrosepticum SCRI1043 poly(glycerophosphate chain) D-alanine transfer protein YP_051220.1 3496176 R 218491 CDS YP_051221.1 50122054 2884122 3497785..3498189 1 NC_004547.2 hypothetical protein 3498189 2884122 ECA3131 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051221.1 3497785 D 218491 CDS YP_051222.1 50122055 2884098 3498248..3498448 1 NC_004547.2 lipoprotein 3498448 2884098 ECA3132 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_051222.1 3498248 D 218491 CDS YP_051223.1 50122056 2884099 complement(3498588..3499022) 1 NC_004547.2 hypothetical protein 3499022 2884099 ECA3133 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051223.1 3498588 R 218491 CDS YP_051224.1 50122057 2884100 complement(3499135..3500028) 1 NC_004547.2 Similar to Yersinia pestis lysr-family transcriptional regulatory protein ptxr or ypo2807 or y1123 SWALL:Q8ZCZ5 (EMBL:AJ414153) (297 aa) fasta scores: E(): 4.2e-79, 68.47% id in 295 aa, and to Escherichia coli O6 hypothetical transcriptional regulator ycjz c0412 SWALL:Q8FKK6 (EMBL:AE016756) (322 aa) fasta scores: E(): 6.1e-77, 66.44% id in 295 aa; LysR family transcriptional regulator 3500028 2884100 ECA3134 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_051224.1 3499135 R 218491 CDS YP_051225.1 50122058 2885632 3500331..3500732 1 NC_004547.2 Similar to Xanthomonas axonopodis hypothetical protein Xac2840 SWALL:Q8PIQ5 (EMBL:AE011925) (130 aa) fasta scores: E(): 5.5e-34, 69.29% id in 127 aa, and to Bradyrhizobium japonicum Bll4598 protein bll4598 SWALL:BAC49863 (EMBL:AP005951) (203 aa) fasta scores: E(): 5.9e-33, 66.41% id in 131 aa; hypothetical protein 3500732 2885632 ECA3135 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051225.1 3500331 D 218491 CDS YP_051226.1 50122059 2885633 complement(3500807..3501130) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri PTS system, cellobiose-specific IIa component CelC or b1736 or c2135 or z2766 or ecs2442 or sf1490 SWALL:PTCA_ECOLI (SWALL:P17335) (116 aa) fasta scores: E(): 3.9e-10, 41.23% id in 97 aa, and to Yersinia pestis PTS system, cellobiose-specific IIa component CelC or ypo2680 or y1253 SWALL:AAM84827 (EMBL:AJ414153) (115 aa) fasta scores: E(): 3.6e-12, 45.91% id in 98 aa; PTS system cellobiose-specific transporter subunit IIA 3501130 2885633 ECA3136 Pectobacterium atrosepticum SCRI1043 PTS system cellobiose-specific transporter subunit IIA YP_051226.1 3500807 R 218491 CDS YP_051227.1 50122060 2884392 3501629..3502645 1 NC_004547.2 Similar to Serratia marcescens iron(III)-binding periplasmic protein precursor SfuA SWALL:SFUA_SERMA (SWALL:P21408) (338 aa) fasta scores: E(): 1.3e-102, 82.84% id in 338 aa, and to Yersinia enterocolitica YfuA SWALL:Q56925 (EMBL:Z47200) (338 aa) fasta scores: E(): 4.7e-99, 80.17% id in 338 aa; iron(III)-binding periplasmic protein 3502645 sfuA 2884392 sfuA Pectobacterium atrosepticum SCRI1043 iron(III)-binding periplasmic protein YP_051227.1 3501629 D 218491 CDS YP_051228.1 50122061 2884393 3502786..3504363 1 NC_004547.2 Similar to Serratia marcescens iron(III)-transport system permease protein SfuB SWALL:SFUB_SERMA (SWALL:P21409) (527 aa) fasta scores: E(): 7.3e-141, 71.29% id in 526 aa, and to Yersinia pestis iron(III)-transport system permease protein SfuB or ypo2959 SWALL:Q8ZCM3 (EMBL:AJ414154) (528 aa) fasta scores: E(): 2.2e-139, 70.61% id in 524 aa; iron ABC transporter permease 3504363 sfuB 2884393 sfuB Pectobacterium atrosepticum SCRI1043 iron ABC transporter permease YP_051228.1 3502786 D 218491 CDS YP_051229.1 50122062 2884394 3504366..3505406 1 NC_004547.2 Similar to Serratia marcescens iron(III)-transport ATP-binding protein SfuC SWALL:SFUC_SERMA (SWALL:P21410) (345 aa) fasta scores: E(): 3.5e-64, 59.59% id in 344 aa, and to Yersinia pestis iron(III)-transport ATP-binding protein SfuC or ypo2960 or yfuc or y1524 SWALL:AAM85095 (EMBL:AJ414154) (349 aa) fasta scores: E(): 8.4e-65, 57.92% id in 347 aa; iron(III)-transport ATP-binding protein 3505406 sfuC 2884394 sfuC Pectobacterium atrosepticum SCRI1043 iron(III)-transport ATP-binding protein YP_051229.1 3504366 D 218491 CDS YP_051230.1 50122063 2885634 complement(3505436..3505828) 1 NC_004547.2 Similar to Yersinia pseudotuberculosis hypothetical protein YfbJ SWALL:YFBJ_YERPS (SWALL:Q93PD4) (128 aa) fasta scores: E(): 1e-20, 52.5% id in 120 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3558 SWALL:YZ58_PSEAE (SWALL:Q9HY59) (137 aa) fasta scores: E(): 3e-11, 41.73% id in 127 aa; hypothetical protein 3505828 2885634 ECA3140 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051230.1 3505436 R 218491 CDS YP_051231.1 50122064 2885635 complement(3505828..3506169) 1 NC_004547.2 Similar to Yersinia pestis, and Yersinia pseudotuberculosis membrane protein ypo2417 SWALL:Q93PD5 (EMBL:AJ414152) (114 aa) fasta scores: E(): 1e-20, 57.79% id in 109 aa, and to Salmonella typhimurium hypothetical protein yfbw or stm2302 SWALL:YFBW_SALTY (SWALL:O52328) (111 aa) fasta scores: E(): 6.8e-14, 48.18% id in 110 aa; hypothetical protein 3506169 2885635 ECA3141 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051231.1 3505828 R 218491 CDS YP_051232.1 50122065 2882941 complement(3506166..3507836) 1 NC_004547.2 catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A; 4-amino-4-deoxy-L-arabinose transferase 3507836 arnT 2882941 arnT Pectobacterium atrosepticum SCRI1043 4-amino-4-deoxy-L-arabinose transferase YP_051232.1 3506166 R 218491 CDS YP_051233.1 50122066 2882942 complement(3507854..3508747) 1 NC_004547.2 Similar to Yersinia pestis, and Yersinia pseudotuberculosis hypothetical protein ypo2419 or y1920 SWALL:Q93PD7 (EMBL:AJ414152) (301 aa) fasta scores: E(): 7.1e-88, 68.24% id in 296 aa, and to Salmonella typhimurium hypothetical protein yfbh or stm2300 SWALL:YFBH_SALTY (SWALL:O52326) (299 aa) fasta scores: E(): 7.7e-76, 62.92% id in 294 aa; hypothetical protein 3508747 2882942 ECA3143 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051233.1 3507854 R 218491 CDS YP_051234.1 50122067 2882943 complement(3508744..3510765) 1 NC_004547.2 Bifunctional polymyxin resistance arnA protein; catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose; active in certain mutant strains; bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase 3510765 2882943 ECA3144 Pectobacterium atrosepticum SCRI1043 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase YP_051234.1 3508744 R 218491 CDS YP_051235.1 50122068 2882795 complement(3510762..3511745) 1 NC_004547.2 catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate; undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase 3511745 2882795 ECA3145 Pectobacterium atrosepticum SCRI1043 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase YP_051235.1 3510762 R 218491 CDS YP_051236.1 50122069 2882796 complement(3511738..3512886) 1 NC_004547.2 catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 3512886 2882796 ECA3146 Pectobacterium atrosepticum SCRI1043 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase YP_051236.1 3511738 R 218491 CDS YP_051237.1 50122070 2884207 complement(3513113..3514279) 1 NC_004547.2 Similar to Escherichia coli UDP-glucose 6-dehydrogenase Ugd or b2028 SWALL:UDG_ECOLI (SWALL:P76373) (388 aa) fasta scores: E(): 2.4e-110, 73.96% id in 388 aa, and to Vibrio cholerae nucleotide sugar dehydrogenase SWALL:Q56625 (EMBL:U47057) (388 aa) fasta scores: E(): 1e-110, 72.93% id in 388 aa; UDP-glucose 6-dehydrogenase 3514279 ugd 2884207 ugd Pectobacterium atrosepticum SCRI1043 UDP-glucose 6-dehydrogenase YP_051237.1 3513113 R 218491 CDS YP_051238.1 50122071 2882797 3514800..3516347 1 NC_004547.2 Similar to Pseudomonas putida GGDEF domain protein pp3242 SWALL:AAN68849 (EMBL:AE016786) (522 aa) fasta scores: E(): 4.1e-67, 38.67% id in 499 aa, and to Xanthomonas campestris response regulator xcc3729 SWALL:Q8P4H8 (EMBL:AE012493) (349 aa) fasta scores: E(): 4.4e-44, 39.94% id in 358 aa; regulator 3516347 2882797 ECA3148 Pectobacterium atrosepticum SCRI1043 regulator YP_051238.1 3514800 D 218491 CDS YP_051239.1 50122072 2882083 3516455..3517318 1 NC_004547.2 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 3517318 folD 2882083 folD Pectobacterium atrosepticum SCRI1043 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_051239.1 3516455 D 218491 CDS YP_051240.1 50122073 2882717 3517351..3517563 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein ybcj or c0644 SWALL:AAN79121 (EMBL:AE016757) (77 aa) fasta scores: E(): 3.2e-19, 79.41% id in 68 aa, and to Salmonella typhimurium, and Salmonella typhi cytoplasmic protein ybcj or stm0541 or sty0587 SWALL:Q8XG46 (EMBL:AE008721) (70 aa) fasta scores: E(): 5.8e-19, 77.94% id in 68 aa; hypothetical protein 3517563 2882717 ECA3150 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051240.1 3517351 D 218491 CDS YP_051241.1 50122074 2881422 complement(3517663..3519048) 1 NC_004547.2 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 3519048 cysS 2881422 cysS Pectobacterium atrosepticum SCRI1043 cysteinyl-tRNA synthetase YP_051241.1 3517663 R 218491 CDS YP_051242.1 50122075 2882718 complement(3519349..3519771) 1 NC_004547.2 Similar to Chlorobium tepidum hypothetical protein Ct0748 SWALL:Q8KEE1 (EMBL:AE012845) (133 aa) fasta scores: E(): 6.3e-19, 46.21% id in 132 aa, and to Shewanella oneidensis conserved hypothetical protein so3319 SWALL:AAN56317 (EMBL:AE015770) (147 aa) fasta scores: E(): 1.9e-06, 33.84% id in 130 aa; hypothetical protein 3519771 2882718 ECA3152 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051242.1 3519349 R 218491 CDS YP_051243.1 50122076 2882817 3520193..3520687 1 NC_004547.2 Similar to Escherichia coli peptidyl-prolyl cis-trans isomerase B PpiB or b0525 SWALL:PPIB_ECOLI (SWALL:P23869) (164 aa) fasta scores: E(): 3.1e-53, 81.7% id in 164 aa; peptidyl-prolyl cis-trans isomerase B 3520687 ppiB 2882817 ppiB Pectobacterium atrosepticum SCRI1043 peptidyl-prolyl cis-trans isomerase B YP_051243.1 3520193 D 218491 CDS YP_051244.1 50122077 2882791 3520698..3521420 1 NC_004547.2 catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; UDP-2,3-diacylglucosamine hydrolase 3521420 lpxH 2882791 lpxH Pectobacterium atrosepticum SCRI1043 UDP-2,3-diacylglucosamine hydrolase YP_051244.1 3520698 D 218491 CDS YP_051245.1 50122078 2881325 3521609..3522118 1 NC_004547.2 Catalyzes a step in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase catalytic subunit 3522118 purE 2881325 purE Pectobacterium atrosepticum SCRI1043 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_051245.1 3521609 D 218491 CDS YP_051246.1 50122079 2881328 3522115..3523185 1 NC_004547.2 With PurE catalyzes the conversion of aminoimidazole ribonucleotide to carboxyaminoimidazole ribonucleotide in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase ATPase subunit 3523185 purK 2881328 purK Pectobacterium atrosepticum SCRI1043 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_051246.1 3522115 D 218491 CDS YP_051247.1 50122080 2884418 3523656..3524945 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 serine transporter SdaC or DcrA or b2796 or z4113 or ecs3656 SWALL:SDAC_ECOLI (SWALL:P36559) (429 aa) fasta scores: E(): 8.6e-133, 78.68% id in 427 aa; serine transporter 3524945 sdaC 2884418 sdaC Pectobacterium atrosepticum SCRI1043 serine transporter YP_051247.1 3523656 D 218491 CDS YP_051248.1 50122081 2884417 3525014..3526381 1 NC_004547.2 Similar to Escherichia coli L-serine dehydratase 2 SdaB or b2797 SWALL:SDHM_ECOLI (SWALL:P30744) (455 aa) fasta scores: E(): 2.1e-132, 71.2% id in 455 aa. Also similar to ECA2380 (SdaA) (75.165% id. in 455 aa overlap); L-serine dehydratase 2 3526381 sdaB 2884417 sdaB Pectobacterium atrosepticum SCRI1043 L-serine dehydratase 2 YP_051248.1 3525014 D 218491 CDS YP_051249.1 50122082 2882719 complement(3526486..3526923) 1 NC_004547.2 Similar to Salmonella typhimurium transcriptional regulator stm2195 SWALL:Q8ZNL4 (EMBL:AE008798) (129 aa) fasta scores: E(): 3.8e-14, 38.68% id in 137 aa, and to Salmonella typhi DNA-binding protein sty2429 SWALL:Q8Z5A0 (EMBL:AL627273) (129 aa) fasta scores: E(): 4.4e-14, 38.68% id in 137 aa; transcriptional regulator 3526923 2882719 ECA3160 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_051249.1 3526486 R 218491 CDS YP_051250.1 50122083 2882475 complement(3527053..3527868) 1 NC_004547.2 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 3527868 pstB 2882475 pstB Pectobacterium atrosepticum SCRI1043 phosphate transporter ATP-binding protein YP_051250.1 3527053 R 218491 CDS YP_051251.1 50122084 2882470 complement(3527884..3529530) 1 NC_004547.2 Similar to Pseudomonas aeruginosa a transmembrane component of the phosphate specific transport complex PstA SWALL:Q51545 (EMBL:D45195) (513 aa) fasta scores: E(): 8.4e-82, 50.99% id in 502 aa, and to Yersinia pestis phosphate transport system permease PstA or ypo2834 SWALL:Q8ZCX4 (EMBL:AJ414153) (570 aa) fasta scores: E(): 3.2e-124, 65.88% id in 551 aa; phosphate ABC transporter permease 3529530 pstA 2882470 pstA Pectobacterium atrosepticum SCRI1043 phosphate ABC transporter permease YP_051251.1 3527884 R 218491 CDS YP_051252.1 50122085 2882461 complement(3529527..3531695) 1 NC_004547.2 Similar to Pseudomonas aeruginosa phosphate transport system permease protein PstC or pa5368 SWALL:Q51544 (EMBL:D45195) (677 aa) fasta scores: E(): 4e-85, 40.05% id in 674 aa, and to Yersinia pestis phosphate transport system permease PstC or ypo2835 or y1399 SWALL:Q8ZCX3 (EMBL:AJ414153) (749 aa) fasta scores: E(): 1.2e-107, 52.21% id in 745 aa; phosphate ABC transporter permease 3531695 pstC 2882461 pstC Pectobacterium atrosepticum SCRI1043 phosphate ABC transporter permease YP_051252.1 3529527 R 218491 CDS YP_051253.1 50122086 2882728 3531913..3533985 1 NC_004547.2 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 3533985 ppk 2882728 ppk Pectobacterium atrosepticum SCRI1043 polyphosphate kinase YP_051253.1 3531913 D 218491 CDS YP_051254.1 50122087 2882331 3533985..3535520 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 exopolyphosphatase Ppx or b2502 or c3020 or z3765 or ecs3364 SWALL:PPX_ECOLI (SWALL:P29014) (512 aa) fasta scores: E(): 8.4e-153, 75.3% id in 498 aa; exopolyphosphatase 3535520 ppx 2882331 ppx Pectobacterium atrosepticum SCRI1043 exopolyphosphatase YP_051254.1 3533985 D 218491 CDS YP_051255.1 50122088 2882720 3535756..3535944 1 NC_004547.2 hypothetical protein 3535944 2882720 ECA3166 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051255.1 3535756 D 218491 CDS YP_051256.1 50122089 2883405 complement(3536586..3537011) 1 NC_004547.2 Similar to Xanthomonas axonopodis organic hydroperoxide resistance protein Ohr or xac0282 SWALL:OHR_XANAC (SWALL:O68390) (142 aa) fasta scores: E(): 7.1e-36, 71.94% id in 139 aa, and to Ralstonia solanacearum probable organic hydroperoxide resistance protein Ohr or rsp1107 or rs02615 SWALL:Q8XQW1 (EMBL:AL646082) (141 aa) fasta scores: E(): 2.7e-40, 77.3% id in 141 aa; organic hydroperoxide resistance protein 3537011 ohr 2883405 ohr Pectobacterium atrosepticum SCRI1043 organic hydroperoxide resistance protein YP_051256.1 3536586 R 218491 CDS YP_051257.1 50122090 2883406 complement(3537204..3537641) 1 NC_004547.2 Similar to Xanthomonas campestris transcriptional regulator OhrR SWALL:Q93R11 (EMBL:AF036166) (153 aa) fasta scores: E(): 1.2e-34, 69.06% id in 139 aa; transcriptional regulator 3537641 ohrR 2883406 ohrR Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_051257.1 3537204 R 218491 CDS YP_051258.1 50122091 2883179 3537873..3539351 1 NC_004547.2 Similar to Yersinia pestis divalent cation transport protein MgtE or ypo2839 or y1395 SWALL:Q8ZCW9 (EMBL:AJ414153) (491 aa) fasta scores: E(): 4.4e-112, 66.05% id in 489 aa, and to Pseudomonas putida magnesium transporter MgtE or pp4471 SWALL:AAN70046 (EMBL:AE016790) (480 aa) fasta scores: E(): 7.8e-83, 49.08% id in 489 aa; magnesium transporter 3539351 mgtE 2883179 mgtE Pectobacterium atrosepticum SCRI1043 magnesium transporter YP_051258.1 3537873 D 218491 CDS YP_051259.1 50122092 2883096 complement(3539417..3540580) 1 NC_004547.2 catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; galactokinase 3540580 galK 2883096 galK Pectobacterium atrosepticum SCRI1043 galactokinase YP_051259.1 3539417 R 218491 CDS YP_051260.1 50122093 2883046 complement(3540590..3541630) 1 NC_004547.2 catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; galactose-1-phosphate uridylyltransferase 3541630 galT 2883046 galT Pectobacterium atrosepticum SCRI1043 galactose-1-phosphate uridylyltransferase YP_051260.1 3540590 R 218491 CDS YP_051261.1 50122094 2883045 3542091..3543101 1 NC_004547.2 controls transcription of galETKM; DNA-binding transcriptional regulator GalR 3543101 galR 2883045 galR Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional regulator GalR YP_051261.1 3542091 D 218491 CDS YP_051262.1 50122095 2883667 3543587..3544894 1 NC_004547.2 porin involved in the transport of maltose and maltodextrins; maltoporin 3544894 lamB 2883667 lamB Pectobacterium atrosepticum SCRI1043 maltoporin YP_051262.1 3543587 D 218491 CDS YP_051263.1 50122096 2881942 complement(3545397..3546479) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 maltose/maltodextrin transport ATP-binding protein MalK or b4035 or z5633 or ecs5018 SWALL:MALK_ECOLI (SWALL:P02914) (371 aa) fasta scores: E(): 1.1e-65, 53.48% id in 359 aa; maltose/maltodextrin transport ATP-binding protein 3546479 malK 2881942 malK Pectobacterium atrosepticum SCRI1043 maltose/maltodextrin transport ATP-binding protein YP_051263.1 3545397 R 218491 CDS YP_051264.1 50122097 2881497 3546973..3548205 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 maltose-binding periplasmic protein precursor MalE or b4034 or z5632 or ecs5017 SWALL:MALE_ECOLI (SWALL:P02928) (396 aa) fasta scores: E(): 3.4e-31, 31.18% id in 404 aa, and to Yersinia pestis sugar-binding protein ypo0856 or y3241 SWALL:AAM86791 (EMBL:AJ414145) (420 aa) fasta scores: E(): 1.2e-97, 62.04% id in 411 aa; maltose-binding periplasmic protein 3548205 malE 2881497 malE Pectobacterium atrosepticum SCRI1043 maltose-binding periplasmic protein YP_051264.1 3546973 D 218491 CDS YP_051265.1 50122098 2881498 3548305..3549609 1 NC_004547.2 Similar to Escherichia coli maltose transport system permease protein MalF or b4033 SWALL:MALF_ECOLI (SWALL:P02916) (514 aa) fasta scores: E(): 5.9e-36, 39.71% id in 277 aa, and to Yersinia pestis maltodextrin transport permease ypo0855 or MalF or y3240 SWALL:Q8ZHN5 (EMBL:AJ414145) (435 aa) fasta scores: E(): 6.8e-138, 81.86% id in 419 aa; maltose transport system permease 3549609 malF 2881498 malF Pectobacterium atrosepticum SCRI1043 maltose transport system permease YP_051265.1 3548305 D 218491 CDS YP_051266.1 50122099 2881941 3549622..3550470 1 NC_004547.2 Similar to Yersinia pestis maltodextrin permease protein ypo0854 or MalG or y3239 SWALL:Q8ZHN6 (EMBL:AJ414145) (283 aa) fasta scores: E(): 9.1e-93, 83.98% id in 281 aa, and to Bacillus halodurans maltose/maltodextrin transport system bh2021 SWALL:Q9KBA7 (EMBL:AP001514) (283 aa) fasta scores: E(): 1.9e-77, 69.14% id in 282 aa; maltose/maltodextrin transport permease 3550470 malG 2881941 malG Pectobacterium atrosepticum SCRI1043 maltose/maltodextrin transport permease YP_051266.1 3549622 D 218491 CDS YP_051267.1 50122100 2882853 3550506..3551726 1 NC_004547.2 Similar to Pseudomonas fluorescens arabinogalactan endo-1,4-beta-galactosidase precursor GalA or GanA SWALL:GANA_PSEFL (SWALL:P48841) (376 aa) fasta scores: E(): 3.5e-35, 33.98% id in 409 aa, and to Yersinia pestis galactosidase ypo0853 or y3238 SWALL:Q8ZHN7 (EMBL:AJ414145) (400 aa) fasta scores: E(): 2.1e-117, 72.51% id in 393 aa; arabinogalactan endo-1,4-beta-galactosidase 3551726 2882853 ECA3178 Pectobacterium atrosepticum SCRI1043 arabinogalactan endo-1,4-beta-galactosidase YP_051267.1 3550506 D 218491 CDS YP_051268.1 50122101 2881415 3551956..3554016 1 NC_004547.2 Similar to Clostridium perfringens beta-galactosidase Pbg SWALL:Q59312 (EMBL:D49537) (676 aa) fasta scores: E(): 1.1e-160, 52.44% id in 675 aa, and to Yersinia pestis puative beta-galactosidase BgaB or ypo0852 or y3237 SWALL:Q8ZHN8 (EMBL:AJ414145) (686 aa) fasta scores: E(): 0, 70.26% id in 686 aa; beta-galactosidase 3554016 pbg 2881415 pbg Pectobacterium atrosepticum SCRI1043 beta-galactosidase YP_051268.1 3551956 D 218491 CDS YP_051269.1 50122102 2882854 <3554169..3554510 1 NC_004547.2 Similar to Yersinia pestis PTS transport protein ypo0851 or y3236 SWALL:Q8ZHN9 (EMBL:AJ414145) (103 aa) fasta scores: E(): 9.9e-12, 57.14% id in 77 aa, and to the C-terminal region of Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 PTS system, glucose-specific iibc component ptsg or glca or umg or b1101 or c1373 or z1740 or ecs1479 SWALL:PTGB_ECOLI (SWALL:P05053) (477 aa) fasta scores: E(): 1.6e-10, 58.33% id in 72 aa; PTS system glucose-specific transporter subunit IIBC (partial) 3554510 2882854 ECA3180 Pectobacterium atrosepticum SCRI1043 PTS system glucose-specific transporter subunit IIBC (partial) YP_051269.1 <3554169 D 218491 CDS YP_051270.1 50122103 2882951 complement(3554642..3556399) 1 NC_004547.2 component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent; D-lactate dehydrogenase 3556399 dld 2882951 dld Pectobacterium atrosepticum SCRI1043 D-lactate dehydrogenase YP_051270.1 3554642 R 218491 CDS YP_051271.1 50122104 2882855 complement(3556470..3557435) 1 NC_004547.2 Similar to Pseudomonas aeruginosa probable oxidoreductase pa3795 SWALL:Q9HXK2 (EMBL:AE004798) (316 aa) fasta scores: E(): 1.6e-71, 64.55% id in 316 aa, and to Xanthomonas axonopodis oxidoreductase moca or xac0288 SWALL:Q8PQN5 (EMBL:AE011653) (323 aa) fasta scores: E(): 2.4e-69, 64.85% id in 313 aa; oxidoreductase 3557435 2882855 ECA3182 Pectobacterium atrosepticum SCRI1043 oxidoreductase YP_051271.1 3556470 R 218491 CDS YP_051272.1 50122105 2883789 3557692..3558888 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 nucleoside permease NupC or Cru or b2393 or c2932 SWALL:NUPC_ECOLI (SWALL:P33031) (400 aa) fasta scores: E(): 8e-112, 77.36% id in 402 aa; nucleoside permease 3558888 nupC1 2883789 nupC1 Pectobacterium atrosepticum SCRI1043 nucleoside permease YP_051272.1 3557692 D 218491 CDS YP_051273.1 50122106 2882257 3559135..3560370 1 NC_004547.2 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtA 3560370 2882257 ECA3184 Pectobacterium atrosepticum SCRI1043 multidrug efflux system subunit MdtA YP_051273.1 3559135 D 218491 CDS YP_051274.1 50122107 2885119 3560370..3563492 1 NC_004547.2 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtB 3563492 mdtB 2885119 mdtB Pectobacterium atrosepticum SCRI1043 multidrug efflux system subunit MdtB YP_051274.1 3560370 D 218491 CDS YP_051275.1 50122108 2885084 3563489..3566569 1 NC_004547.2 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC; confers resistance against novobiocin and deoxycholate; multidrug efflux system subunit MdtC 3566569 mdtC 2885084 mdtC Pectobacterium atrosepticum SCRI1043 multidrug efflux system subunit MdtC YP_051275.1 3563489 D 218491 CDS YP_051276.1 50122109 2885085 3566972..3568372 1 NC_004547.2 Similar to Escherichia coli drug transporter MdtD SWALL:BAC06610 (EMBL:AB089190) (471 aa) fasta scores: E(): 6.9e-129, 74.02% id in 462 aa, and to Yersinia pestis membrane protein yegb or ypo2850 or y1383 SWALL:Q8ZCV8 (EMBL:AJ414154) (465 aa) fasta scores: E(): 1.2e-127, 73.92% id in 464 aa; multidrug efflux system protein MdtE 3568372 mdtD 2885085 mdtD Pectobacterium atrosepticum SCRI1043 multidrug efflux system protein MdtE YP_051276.1 3566972 D 218491 CDS YP_051277.1 50122110 2881541 3568380..3569747 1 NC_004547.2 Similar to Escherichia coli sensor protein BaeS or b2078 SWALL:BAES_ECOLI (SWALL:P30847) (467 aa) fasta scores: E(): 3.1e-113, 65.06% id in 458 aa; signal transduction histidine-protein kinase BaeS 3569747 baeS 2881541 baeS Pectobacterium atrosepticum SCRI1043 signal transduction histidine-protein kinase BaeS YP_051277.1 3568380 D 218491 CDS YP_051278.1 50122111 2881540 3569781..3570509 1 NC_004547.2 response regulator in two-component regulatory system with BaeS; regulator of RNA synthesis, flagellar biosynthesis, chemotaxis and transport; DNA-binding transcriptional regulator BaeR 3570509 baeR 2881540 baeR Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional regulator BaeR YP_051278.1 3569781 D 218491 CDS YP_051279.1 50122112 2884431 3570531..3571184 1 NC_004547.2 Similar to Yersinia enterocolitica streptogramin A acetyl transferase Sat SWALL:AAN77593 (EMBL:AF170730) (221 aa) fasta scores: E(): 3.9e-63, 72.72% id in 209 aa, and to Staphylococcus aureus Vat B vat B SWALL:Q57156 (EMBL:U19459) (212 aa) fasta scores: E(): 1.4e-51, 57.76% id in 206 aa; streptogramin A acetyl transferase 3571184 sat 2884431 sat Pectobacterium atrosepticum SCRI1043 streptogramin A acetyl transferase YP_051279.1 3570531 D 218491 CDS YP_051280.1 50122113 2882258 3571239..3571790 1 NC_004547.2 Similar to Pseudomonas putida acetyltransferase, GnaT family pp0820 SWALL:AAN66445 (EMBL:AE016777) (187 aa) fasta scores: E(): 1.9e-31, 48.57% id in 175 aa, and to Pseudomonas aeruginosa hypothetical protein Pa1472 SWALL:Q9I3P0 (EMBL:AE004576) (184 aa) fasta scores: E(): 3.5e-39, 61.76% id in 170 aa; acetyltransferase 3571790 2882258 ECA3191 Pectobacterium atrosepticum SCRI1043 acetyltransferase YP_051280.1 3571239 D 218491 CDS YP_051281.1 50122114 2882259 3571960..3572919 1 NC_004547.2 Similar to Vibrio cholerae hypothetical protein Vc1096 SWALL:Q9KT09 (EMBL:AE004190) (315 aa) fasta scores: E(): 4.6e-66, 53.58% id in 321 aa, and to Pseudomonas putida glutathione s-transferase domain protein pp3998 SWALL:AAN69592 (EMBL:AE016788) (325 aa) fasta scores: E(): 6.4e-66, 54.95% id in 313 aa; hypothetical protein 3572919 2882259 ECA3192 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051281.1 3571960 D 218491 CDS YP_051282.1 50122115 2882260 3573115..3574479 1 NC_004547.2 Similar to Yersinia pestis protease ypo2855 or y1379 SWALL:Q8ZCV5 (EMBL:AJ414154) (464 aa) fasta scores: E(): 9.6e-156, 84.92% id in 451 aa, and to Salmonella typhimurium, and Salmonella typhi protease yegq or stm2136 or sty2365 SWALL:Q8XFD2 (EMBL:AE008795) (453 aa) fasta scores: E(): 1.8e-153, 83.48% id in 454 aa; protease 3574479 2882260 ECA3193 Pectobacterium atrosepticum SCRI1043 protease YP_051282.1 3573115 D 218491 CDS YP_051283.1 50122116 2882437 3575248..3576147 1 NC_004547.2 cytosolic protein with phosphatidylglycerol kinase activity; undetermined physiological role; lipid kinase 3576147 2882437 ECA3194 Pectobacterium atrosepticum SCRI1043 lipid kinase YP_051283.1 3575248 D 218491 CDS YP_051284.1 50122117 2882438 complement(3576161..3576568) 1 NC_004547.2 Similar to Yersinia pestis PsiE protein homolog PsiE or ypo3717 or y0025 SWALL:Q8ZAS3 (EMBL:AJ414158) (135 aa) fasta scores: E(): 2.3e-39, 75.55% id in 135 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri PsiE protein PsiE or b4030 or c5001 or sf4175 SWALL:AAN45596 (EMBL:J02812) (136 aa) fasta scores: E(): 1.9e-35, 71.53% id in 130 aa; phosphate-starvation-inducible protein PsiE 3576568 2882438 ECA3195 Pectobacterium atrosepticum SCRI1043 phosphate-starvation-inducible protein PsiE YP_051284.1 3576161 R 218491 CDS YP_051285.1 50122118 2884300 complement(3576767..3577570) 1 NC_004547.2 catalyzes the formation of 4-amino-2-methyl-5-diphosphomethylpyrimidine; phosphomethylpyrimidine kinase 3577570 thiD 2884300 thiD Pectobacterium atrosepticum SCRI1043 phosphomethylpyrimidine kinase YP_051285.1 3576767 R 218491 CDS YP_051286.1 50122119 2884288 complement(3577567..3578361) 1 NC_004547.2 catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase 3578361 thiM 2884288 thiM Pectobacterium atrosepticum SCRI1043 hydroxyethylthiazole kinase YP_051286.1 3577567 R 218491 CDS YP_051287.1 50122120 2882439 3578861..3579880 1 NC_004547.2 Similar to Escherichia coli hypothetical zinc-type alcohol dehydrogenase-like protein yjgb or b4269 SWALL:YJGB_ECOLI (SWALL:P27250) (339 aa) fasta scores: E(): 2.9e-112, 83.18% id in 339 aa, and to Salmonella typhimurium alcohol dehydrogenase yjgb or stm4486 SWALL:Q8ZK20 (EMBL:AE008910) (339 aa) fasta scores: E(): 6.8e-112, 83.48% id in 339 aa; zinc-binding dehydrogenase 3579880 2882439 ECA3198 Pectobacterium atrosepticum SCRI1043 zinc-binding dehydrogenase YP_051287.1 3578861 D 218491 CDS YP_051288.1 50122121 2881838 3580034..3580957 1 NC_004547.2 Similar to Yersinia pestis HmsT or ypo0425 or y3756 SWALL:AAM87301 (EMBL:AF129277) (390 aa) fasta scores: E(): 1.1e-12, 28.21% id in 319 aa, and to Pseudomonas putida GGDEF domain protein pp3452 SWALL:AAN69054 (EMBL:AE016786) (363 aa) fasta scores: E(): 2.2e-12, 32.65% id in 245 aa; hypothetical protein 3580957 2881838 ECA3199 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051288.1 3580034 D 218491 CDS YP_051289.1 50122122 2881839 complement(3581411..3582463) 1 NC_004547.2 Similar to Listeria innocua hypothetical protein Lin1094 SWALL:Q92CS7 (EMBL:AL596167) (340 aa) fasta scores: E(): 1.5e-25, 30.51% id in 308 aa, and to Streptomyces coelicolor hypothetical protein sco3599 or sc66t3.10C SWALL:Q9XAK3 (EMBL:AL939117) (318 aa) fasta scores: E(): 2e-09, 30.41% id in 263 aa; hypothetical protein 3582463 2881839 ECA3200 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051289.1 3581411 R 218491 CDS YP_051290.1 50122123 2881840 complement(3582508..3583245) 1 NC_004547.2 Similar to Ralstonia solanacearum probable transmembrane protein rsp0190 or rs04702 SWALL:Q8XTC3 (EMBL:AL646077) (263 aa) fasta scores: E(): 1.9e-51, 58.87% id in 248 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2847 SWALL:Q9HZZ6 (EMBL:AE004711) (249 aa) fasta scores: E(): 1.7e-40, 46.69% id in 242 aa; hypothetical protein 3583245 2881840 ECA3201 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051290.1 3582508 R 218491 CDS YP_051291.1 50122124 2881434 3583505..3584407 1 NC_004547.2 Similar to Ralstonia solanacearum probable DNA-binding transcriptional regulatory transcription regulator protein rsc1196 or rs05728 SWALL:Q8Y048 (EMBL:AL646063) (306 aa) fasta scores: E(): 3.9e-42, 42.76% id in 297 aa, and to Brucella melitensis transcriptional regulatory protein, LysR family bmeii1077 SWALL:Q8YB24 (EMBL:AE009740) (294 aa) fasta scores: E(): 2.7e-38, 39.51% id in 291 aa; LysR family transcriptional regulator 3584407 2881434 ECA3202 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_051291.1 3583505 D 218491 CDS YP_051292.1 50122125 2881435 complement(3584423..3585196) 1 NC_004547.2 Similar to Agrobacterium tumefaciens Agr_c_1524p agr_c_1524 SWALL:Q8U5H6 (EMBL:AE008016) (265 aa) fasta scores: E(): 3.8e-31, 41.78% id in 213 aa, and to Rhizobium meliloti hypothetical protein r00954 or smc00096 SWALL:Q92KJ4 (EMBL:AL591785) (245 aa) fasta scores: E(): 1.2e-30, 37.94% id in 253 aa; hypothetical protein 3585196 2881435 ECA3203 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051292.1 3584423 R 218491 CDS YP_051293.1 50122126 2881436 complement(3585401..3585751) 1 NC_004547.2 hypothetical protein 3585751 2881436 ECA3204 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051293.1 3585401 R 218491 CDS YP_051294.1 50122127 2881437 3586091..3587221 1 NC_004547.2 Similar to Bacillus sphaericus penicillin acylase SWALL:PAC_BACSH (SWALL:P12256) (338 aa) fasta scores: E(): 2.3e-07, 25.4% id in 307 aa, and to Agrobacterium tumefaciens choloylglycine hydrolase family protein atu4586 or agr_l_573 SWALL:Q8U768 (EMBL:AE009386) (355 aa) fasta scores: E(): 6.1e-56, 60.49% id in 367 aa, and to Clostridium perfringens choloylglycine hydrolase cbh or cpe0709 SWALL:CBH_CLOPE (SWALL:P54965) (329 aa) fasta scores: E(): 2.1e-05, 25.07% id in 315 aa; exported choloylglycine hydrolase 3587221 2881437 ECA3205 Pectobacterium atrosepticum SCRI1043 exported choloylglycine hydrolase YP_051294.1 3586091 D 218491 CDS YP_051295.1 50122128 2881355 complement(3587320..3587535) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri sugar fermentation stimulation protein B SfsB or Nlp or Sfs7 or b3188 or c3946 or z4551 or ecs4067 or sf3228 SWALL:SFSB_ECOLI (SWALL:P18837) (92 aa) fasta scores: E(): 3.1e-15, 71.21% id in 66 aa. Also similar to ECA0513 (91.139% id. in 79 aa overlap), and to ECA0966 (85.714% id. in 70 aa overlap), and to ECA0686 (76.119% id. in 67 aa overlap.); transcriptional regulator 3587535 2881355 ECA3206 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_051295.1 3587320 R 218491 CDS YP_051296.1 50122129 2881356 complement(3587836..3588690) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1734 or y2574 SWALL:AAM86129 (EMBL:AJ414150) (283 aa) fasta scores: E(): 2.6e-76, 70.31% id in 283 aa, and to Shewanella oneidensis rio1/zk632.3/mj0444 family, so3973 SWALL:AAN56947 (EMBL:AE015828) (285 aa) fasta scores: E(): 4.1e-70, 65.37% id in 283 aa; hypothetical protein 3588690 2881356 ECA3207 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051296.1 3587836 R 218491 CDS YP_051297.1 50122130 2883706 complement(3589055..3590632) 1 NC_004547.2 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 3590632 guaA 2883706 guaA Pectobacterium atrosepticum SCRI1043 GMP synthase YP_051297.1 3589055 R 218491 CDS YP_051298.1 50122131 2883707 complement(3590739..3592205) 1 NC_004547.2 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 3592205 guaB 2883707 guaB Pectobacterium atrosepticum SCRI1043 inosine 5'-monophosphate dehydrogenase YP_051298.1 3590739 R 218491 CDS YP_051299.1 50122132 2882644 3592378..3593766 1 NC_004547.2 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 3593766 xseA 2882644 xseA Pectobacterium atrosepticum SCRI1043 exodeoxyribonuclease VII large subunit YP_051299.1 3592378 D 218491 CDS YP_051300.1 50122133 2882533 3594004..3595047 1 NC_004547.2 Similar to Erwinia carotovora extracellular metalloprotease precursor Prt1 SWALL:PRT1_ERWCA (SWALL:Q99132) (347 aa) fasta scores: E(): 1.4e-136, 95.1% id in 347 aa; extracellular metalloprotease 3595047 prt1 2882533 prt1 Pectobacterium atrosepticum SCRI1043 extracellular metalloprotease YP_051300.1 3594004 D 218491 CDS YP_051301.1 50122134 2881357 3595044..3595388 1 NC_004547.2 hypothetical protein 3595388 2881357 ECA3212 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051301.1 3595044 D 218491 CDS YP_051302.1 50122135 2882094 complement(3595535..3596425) 1 NC_004547.2 Similar to Rhizobium meliloti transcriptional regulator, AraC family protein rb0963 or smb21385 SWALL:Q92UX2 (EMBL:AL603645) (311 aa) fasta scores: E(): 9.2e-43, 42.9% id in 296 aa, and to Agrobacterium tumefaciens transcriptional regulator, AraC family atu2021 or agr_c_3663 SWALL:Q8UDU8 (EMBL:AE009153) (301 aa) fasta scores: E(): 3.2e-32, 36.17% id in 282 aa; AraC family transcriptional regulator 3596425 2882094 ECA3213 Pectobacterium atrosepticum SCRI1043 AraC family transcriptional regulator YP_051302.1 3595535 R 218491 CDS YP_051303.1 50122136 2882095 3596586..3597341 1 NC_004547.2 Similar to Bacillus subtilis 3-oxoacyl-[acyl-carrier protein] reductase FabG SWALL:FABG_BACSU (SWALL:P51831) (246 aa) fasta scores: E(): 4.4e-24, 38.24% id in 251 aa, and to Ralstonia solanacearum probable dehydrogenase/reductase oxidoreductase protein rsc1730 or rs02918 SWALL:Q8XYM8 (EMBL:AL646066) (256 aa) fasta scores: E(): 1.8e-51, 59.91% id in 247 aa; short chain dehydrogenase 3597341 2882095 ECA3214 Pectobacterium atrosepticum SCRI1043 short chain dehydrogenase YP_051303.1 3596586 D 218491 CDS YP_051304.1 50122137 2882096 complement(3597445..3598404) 1 NC_004547.2 Similar to Rhizobium meliloti hypothetical transmembrane protein smc02895 r00220 or smc02895 SWALL:Q92SX9 (EMBL:AL591782) (314 aa) fasta scores: E(): 1.8e-13, 25.72% id in 311 aa, and to Rickettsia prowazekii hypothetical protein Rp372 rp372 SWALL:Q9ZDF7 (EMBL:AJ235271) (323 aa) fasta scores: E(): 1.9e-13, 25.97% id in 308 aa; transporter 3598404 2882096 ECA3215 Pectobacterium atrosepticum SCRI1043 transporter YP_051304.1 3597445 R 218491 CDS YP_051305.1 50122138 2884917 complement(3598497..3599984) 1 NC_004547.2 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 3599984 engA 2884917 engA Pectobacterium atrosepticum SCRI1043 GTP-binding protein EngA YP_051305.1 3598497 R 218491 CDS YP_051306.1 50122139 2882097 complement(3600129..3601310) 1 NC_004547.2 with YaeT, YfiO, and NlpB forms a complex involved in outer membrane protein biogenesis; outer membrane protein assembly complex subunit YfgL 3601310 2882097 ECA3217 Pectobacterium atrosepticum SCRI1043 outer membrane protein assembly complex subunit YfgL YP_051306.1 3600129 R 218491 CDS YP_051307.1 50122140 2882191 complement(3601321..3601941) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo2877 or y1355 SWALL:Q8ZCT7 (EMBL:AJ414154) (211 aa) fasta scores: E(): 3.2e-42, 61.13% id in 211 aa, and to Escherichia coli O6 hypothetical protein yfgm or c3035 SWALL:AAN81485 (EMBL:AE016764) (206 aa) fasta scores: E(): 1.8e-40, 57.56% id in 205 aa; hypothetical protein 3601941 2882191 ECA3218 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051307.1 3601321 R 218491 CDS YP_051308.1 50122141 2881852 complement(3601955..3603229) 1 NC_004547.2 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 3603229 hisS 2881852 hisS Pectobacterium atrosepticum SCRI1043 histidyl-tRNA synthetase YP_051308.1 3601955 R 218491 CDS YP_051309.1 50122142 2882186 complement(3603367..3604488) 1 NC_004547.2 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 3604488 ispG 2882186 ispG Pectobacterium atrosepticum SCRI1043 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_051309.1 3603367 R 218491 CDS YP_051310.1 50122143 2882192 complement(3604529..3605527) 1 NC_004547.2 Similar to Salmonella typhimurium paral membrane protein yfga or stm2524 SWALL:Q8ZN53 (EMBL:AE008814) (334 aa) fasta scores: E(): 6.4e-54, 58.2% id in 335 aa, and to Escherichia coli O6 hypothetical protein yfga or c3038 SWALL:AAN81488 (EMBL:AE016764) (335 aa) fasta scores: E(): 8.1e-54, 58.03% id in 336 aa; cytoskeletal protein RodZ 3605527 2882192 ECA3221 Pectobacterium atrosepticum SCRI1043 cytoskeletal protein RodZ YP_051310.1 3604529 R 218491 CDS YP_051311.1 50122144 2882193 complement(3605517..3606254) 1 NC_004547.2 Similar to Pseudomonas aeruginosa PilF protein SWALL:Q51526 (EMBL:L49434) (198 aa) fasta scores: E(): 4.5e-07, 28.4% id in 169 aa, and to Yersinia pestis fimbrial biogenesis protein ypo2881 or y1351 SWALL:Q8ZCT4 (EMBL:AJ414154) (249 aa) fasta scores: E(): 4.2e-62, 71.91% id in 235 aa; hypothetical protein 3606254 2882193 ECA3222 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051311.1 3605517 R 218491 CDS YP_051312.1 50122145 2881550 complement(3606505..3607701) 1 NC_004547.2 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 3607701 2881550 ECA3223 Pectobacterium atrosepticum SCRI1043 ribosomal RNA large subunit methyltransferase N YP_051312.1 3606505 R 218491 CDS YP_051313.1 50122146 2885655 complement(3608005..3608433) 1 NC_004547.2 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 3608433 ndk 2885655 ndk Pectobacterium atrosepticum SCRI1043 nucleoside diphosphate kinase YP_051313.1 3608005 R 218491 CDS YP_051314.1 50122147 2881551 3608793..3610373 1 NC_004547.2 Similar to Klebsiella pneumoniae PTS system, alpha-glucoside-specific IIbc component AglA SWALL:PTAB_KLEPN (SWALL:Q9AGA7) (540 aa) fasta scores: E(): 2e-59, 37.28% id in 531 aa, and to Bacillus subtilis PTS system, arbutin-like IIbc component GlvC or GlvCB or Glv-2 SWALL:PTIB_BACSU (SWALL:P54715) (527 aa) fasta scores: E(): 1.9e-58, 35.79% id in 528 aa; PTS system alpha-glucoside-specific transporter subunit IIBC 3610373 2881551 ECA3225 Pectobacterium atrosepticum SCRI1043 PTS system alpha-glucoside-specific transporter subunit IIBC YP_051314.1 3608793 D 218491 CDS YP_051315.1 50122148 2881552 3610387..3611748 1 NC_004547.2 Similar to Klebsiella pneumoniae 6-phospho-alpha-glucosidase AglB SWALL:AGLB_KLEPN (SWALL:Q9AGA6) (440 aa) fasta scores: E(): 2.2e-85, 50.11% id in 441 aa, and to Escherichia coli probable 6-phospho-alpha-glucosidase GlvG or b3681 SWALL:GLVG_ECOLI (SWALL:P31450) (212 aa) fasta scores: E(): 4.9e-41, 53.81% id in 210 aa; 6-phospho-alpha-glucosidase 3611748 2881552 ECA3226 Pectobacterium atrosepticum SCRI1043 6-phospho-alpha-glucosidase YP_051315.1 3610387 D 218491 CDS YP_051316.1 50122149 2884352 3611852..3612721 1 NC_004547.2 catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds; 3-mercaptopyruvate sulfurtransferase 3612721 sseA 2884352 sseA Pectobacterium atrosepticum SCRI1043 3-mercaptopyruvate sulfurtransferase YP_051316.1 3611852 D 218491 CDS YP_051317.1 50122150 2881618 3612789..3613577 1 NC_004547.2 Similar to Oceanobacillus iheyensis transcriptional regulator ob0613 SWALL:BAC12569 (EMBL:AP004595) (282 aa) fasta scores: E(): 6e-11, 28.13% id in 263 aa, and to Haemophilus influenzae hypothetical protein Hi0143 hi0143 SWALL:Y143_HAEIN (SWALL:P44540) (288 aa) fasta scores: E(): 2.8e-09, 26.1% id in 226 aa; transcriptional regulator 3613577 2881618 ECA3228 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_051317.1 3612789 D 218491 CDS YP_051318.1 50122151 2884353 complement(3613612..3614406) 1 NC_004547.2 enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I; enhanced serine sensitivity protein SseB 3614406 sseB 2884353 sseB Pectobacterium atrosepticum SCRI1043 enhanced serine sensitivity protein SseB YP_051318.1 3613612 R 218491 CDS YP_051319.1 50122152 2885062 complement(3614501..3615811) 1 NC_004547.2 catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; aminopeptidase 3615811 pepB 2885062 pepB Pectobacterium atrosepticum SCRI1043 aminopeptidase YP_051319.1 3614501 R 218491 CDS YP_051320.1 50122153 2881619 complement(3616073..3616273) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein yfhj or b2524 or z3791 or ecs3390 or sf2571 SWALL:AAN44070 (EMBL:M88654) (66 aa) fasta scores: E(): 3.5e-23, 83.33% id in 66 aa, and to Yersinia pestis hypothetical protein ypo2890 or y1341 SWALL:Q8ZCS7 (EMBL:AJ414154) (66 aa) fasta scores: E(): 6.1e-20, 76.56% id in 64 aa; hypothetical protein 3616273 2881619 ECA3231 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051320.1 3616073 R 218491 CDS YP_051321.1 50122154 2885601 complement(3616295..3616630) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri ferredoxin, 2fe-2s Fdx or b2525 or z3792 or ecs3391 or sf2572 SWALL:AAN44071 (EMBL:M88654) (111 aa) fasta scores: E(): 6.7e-39, 84.68% id in 111 aa; (2Fe-2S) ferredoxin 3616630 fdx 2885601 fdx Pectobacterium atrosepticum SCRI1043 (2Fe-2S) ferredoxin YP_051321.1 3616295 R 218491 CDS YP_051322.1 50122155 2884528 complement(3616632..3618482) 1 NC_004547.2 involved in the maturation of iron-sulfur cluster-containing proteins; chaperone protein HscA 3618482 hscA 2884528 hscA Pectobacterium atrosepticum SCRI1043 chaperone protein HscA YP_051322.1 3616632 R 218491 CDS YP_051323.1 50122156 2884529 complement(3618557..3619075) 1 NC_004547.2 J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; co-chaperone HscB 3619075 hscB 2884529 hscB Pectobacterium atrosepticum SCRI1043 co-chaperone HscB YP_051323.1 3618557 R 218491 CDS YP_051324.1 50122157 2881620 complement(3619147..3619470) 1 NC_004547.2 forms iron-sulfur clusters of ferredoxin [2FE-2S]; binds iron in the presence of the thioredoxin reductase system; forms homodimers and tetramers; similar to SufA protein; iron-sulfur cluster assembly protein 3619470 iscA 2881620 iscA Pectobacterium atrosepticum SCRI1043 iron-sulfur cluster assembly protein YP_051324.1 3619147 R 218491 CDS YP_051325.1 50122158 2882764 complement(3619552..3619938) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri NifU-like protein NifU or IcsU or b2529 or c3055 or z3796 or ecs3395 or sf2576 SWALL:NIFU_ECOLI (SWALL:P77310) (128 aa) fasta scores: E(): 1.5e-44, 92.18% id in 128 aa, and to Xenorhabdus nematophilus iron-binding protein IscU iscU SWALL:AAN17746 (EMBL:AY138456) (128 aa) fasta scores: E(): 1.1e-44, 91.4% id in 128 aa; scaffold protein 3619938 icsU 2882764 icsU Pectobacterium atrosepticum SCRI1043 scaffold protein YP_051325.1 3619552 R 218491 CDS YP_051326.1 50122159 2881468 complement(3619963..3621177) 1 NC_004547.2 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; cysteine desulfurase 3621177 iscS 2881468 iscS Pectobacterium atrosepticum SCRI1043 cysteine desulfurase YP_051326.1 3619963 R 218491 CDS YP_051327.1 50122160 2881621 complement(3621459..3621953) 1 NC_004547.2 regulates the expression of the iscRSUA operon; DNA-binding transcriptional regulator IscR 3621953 2881621 ECA3238 Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional regulator IscR YP_051327.1 3621459 R 218491 CDS YP_051328.1 50122161 2881410 complement(3622058..3622783) 1 NC_004547.2 Similar to Yersinia pestis SpoU-family rRNA methylase ypo2898 or y1332 SWALL:Q8ZCR9 (EMBL:AJ414154) (257 aa) fasta scores: E(): 1.2e-78, 85.77% id in 239 aa, and to Escherichia coli O157:H7 hypothetical tRNA/rRNA methyltransferase yfhq yfhq or z3799 or ecs3398 SWALL:YFHQ_ECO57 (SWALL:Q8XA83) (245 aa) fasta scores: E(): 3.7e-74, 82.77% id in 238 aa; RNA methyltransferase 3622783 2881410 ECA3239 Pectobacterium atrosepticum SCRI1043 RNA methyltransferase YP_051328.1 3622058 R 218491 CDS YP_051329.1 50122162 2884330 3622920..3623723 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 inositol-1-monophosphatase SuhB or SsyA or b2533 or c3059 or z3800 or ecs3399 SWALL:SUHB_ECOLI (SWALL:P22783) (267 aa) fasta scores: E(): 2.4e-90, 84.64% id in 267 aa; inositol monophosphatase 3623723 suhB 2884330 suhB Pectobacterium atrosepticum SCRI1043 inositol monophosphatase YP_051329.1 3622920 D 218491 CDS YP_051330.1 50122163 2881411 3623896..3625014 1 NC_004547.2 Similar to Yersinia pestis solute-binding periplasmic protein of ABC transporter y3342 SWALL:AAM86892 (EMBL:AE013935) (369 aa) fasta scores: E(): 6.7e-37, 35.22% id in 335 aa, and to Agrobacterium tumefaciens ABC transporter, substrate binding protein atu3391 or agr_l_2862 SWALL:Q8UAI2 (EMBL:AE009269) (377 aa) fasta scores: E(): 2.4e-36, 32.24% id in 366 aa; ABC transporter substrate binding protein 3625014 2881411 ECA3241 Pectobacterium atrosepticum SCRI1043 ABC transporter substrate binding protein YP_051330.1 3623896 D 218491 CDS YP_051331.1 50122164 2881412 3625021..3626103 1 NC_004547.2 Similar to Yersinia pestis feccd-family membrane transport protein ypo1311 or yiub or y2874 SWALL:Q8ZGI6 (EMBL:AJ414147) (360 aa) fasta scores: E(): 2.2e-108, 81.66% id in 360 aa, and to Salmonella typhimurium ABC transport protein stm0770 SWALL:Q8ZQS4 (EMBL:AE008731) (359 aa) fasta scores: E(): 2.2e-94, 72.06% id in 358 aa; ABC transporter permease 3626103 2881412 ECA3242 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_051331.1 3625021 D 218491 CDS YP_051332.1 50122165 2881255 3626100..3626900 1 NC_004547.2 Similar to Escherichia coli ferric-enterobactin-transport protein SWALL:Q8VR78 (EMBL:AF447814) (255 aa) fasta scores: E(): 7.9e-59, 67.05% id in 255 aa, and to Yersinia pestis siderophore ABC transporter, ATP-binding subunit ypo1312 or yiuc or y2873 SWALL:AAM86424 (EMBL:AJ414147) (262 aa) fasta scores: E(): 1.4e-74, 81.15% id in 260 aa; ferric-enterobactin ABC transporter ATP-binding protein 3626900 2881255 ECA3243 Pectobacterium atrosepticum SCRI1043 ferric-enterobactin ABC transporter ATP-binding protein YP_051332.1 3626100 D 218491 CDS YP_051333.1 50122166 2881256 complement(3626957..3627280) 1 NC_004547.2 hypothetical protein 3627280 2881256 ECA3244 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051333.1 3626957 R 218491 CDS YP_051334.1 50122167 2881257 complement(3627365..3629032) 1 NC_004547.2 Similar to Escherichia coli methyl-accepting chemotaxis protein III Trg or b1421 SWALL:MCP3_ECOLI (SWALL:P05704) (546 aa) fasta scores: E(): 4.9e-43, 36.94% id in 536 aa, and to Ralstonia solanacearum methyl-accepting chemotaxis transducer transmembrane protein rsp1027 or rs02364 SWALL:Q8XR41 (EMBL:AL646082) (524 aa) fasta scores: E(): 4.5e-49, 39.36% id in 508 aa; methyl-accepting chemotaxis protein 3629032 2881257 ECA3245 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_051334.1 3627365 R 218491 CDS YP_051335.1 50122168 2881258 complement(3629488..3630615) 1 NC_004547.2 Similar to Yersinia pestis periplasmic substrate-binding transport protein ypo1310 SWALL:Q8ZGI7 (EMBL:AJ414147) (381 aa) fasta scores: E(): 7.2e-48, 35.13% id in 370 aa, and to Agrobacterium tumefaciens ABC transporter, substrate binding protein atu3391 or agr_l_2862 SWALL:Q8UAI2 (EMBL:AE009269) (377 aa) fasta scores: E(): 2e-86, 58.22% id in 371 aa; periplasmic substrate-binding transport protein 3630615 2881258 ECA3246 Pectobacterium atrosepticum SCRI1043 periplasmic substrate-binding transport protein YP_051335.1 3629488 R 218491 CDS YP_051336.1 50122169 2884576 complement(3630734..3631822) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo2901 SWALL:Q8ZCR7 (EMBL:AJ414154) (340 aa) fasta scores: E(): 3.8e-43, 55.95% id in 361 aa, and to Salmonella typhimurium inner membrane protein stm2551 SWALL:Q8ZN38 (EMBL:AE008816) (328 aa) fasta scores: E(): 5.7e-35, 50.28% id in 352 aa; hypothetical protein 3631822 2884576 ECA3247 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051336.1 3630734 R 218491 CDS YP_051337.1 50122170 2884577 complement(3631813..3632472) 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo2902 or y1329 SWALL:Q8ZCR6 (EMBL:AJ414154) (224 aa) fasta scores: E(): 8.7e-56, 65.15% id in 221 aa, and to Salmonella typhi exported protein sty2799 SWALL:Q8Z4M5 (EMBL:AL627275) (212 aa) fasta scores: E(): 5.3e-44, 57.35% id in 204 aa; hypothetical protein 3632472 2884577 ECA3248 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051337.1 3631813 R 218491 CDS YP_051338.1 50122171 2883279 complement(3632517..3633677) 1 NC_004547.2 transporter of 3-phenylpropionate across the inner membrane; member of the major facilitator superfamily of transporters; 3-phenylpropionic acid transporter 3633677 hcaT 2883279 hcaT Pectobacterium atrosepticum SCRI1043 3-phenylpropionic acid transporter YP_051338.1 3632517 R 218491 CDS YP_051339.1 50122172 2882141 complement(3634134..3635387) 1 NC_004547.2 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 3635387 glyA 2882141 glyA Pectobacterium atrosepticum SCRI1043 serine hydroxymethyltransferase YP_051339.1 3634134 R 218491 CDS YP_051340.1 50122173 2881853 3635748..3636938 1 NC_004547.2 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; nitric oxide dioxygenase 3636938 hmpX 2881853 hmpX Pectobacterium atrosepticum SCRI1043 nitric oxide dioxygenase YP_051340.1 3635748 D 218491 CDS YP_051341.1 50122174 2881732 3637577..3639235 1 NC_004547.2 Similar to Erwinia chrysanthemi pectin acetylesterase PaeY SWALL:O32563 (EMBL:Y09828) (551 aa) fasta scores: E(): 8.8e-135, 61.07% id in 542 aa; pectin acetylesterase 3639235 paeY 2881732 paeY Pectobacterium atrosepticum SCRI1043 pectin acetylesterase YP_051341.1 3637577 D 218491 CDS YP_051342.1 50122175 2885060 3639338..3640444 1 NC_004547.2 Similar to Erwinia chrysanthemi pectinesterase a precursor PemA or Pem SWALL:PMEA_ERWCH (SWALL:P07863) (366 aa) fasta scores: E(): 3.5e-98, 70.47% id in 359 aa; pectinesterase A 3640444 pemA 2885060 pemA Pectobacterium atrosepticum SCRI1043 pectinesterase A YP_051342.1 3639338 D 218491 CDS YP_051343.1 50122176 2881762 complement(3640534..3640872) 1 NC_004547.2 indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; nitrogen regulatory protein P-II 1 3640872 glnB 2881762 glnB Pectobacterium atrosepticum SCRI1043 nitrogen regulatory protein P-II 1 YP_051343.1 3640534 R 218491 CDS YP_051344.1 50122177 2884578 complement(3641032..3642369) 1 NC_004547.2 Similar to Yersinia pestis two-component system response regulator ypo2914 SWALL:Q8ZCQ7 (EMBL:AJ414154) (445 aa) fasta scores: E(): 1.3e-149, 91.91% id in 445 aa, and to Salmonella typhimurium transcriptional regulator of two-component regulator protein yfha or stm2562 SWALL:Q8ZN32 (EMBL:AE008816) (445 aa) fasta scores: E(): 1.3e-142, 86.96% id in 445 aa; two-component system response regulator 3642369 2884578 ECA3255 Pectobacterium atrosepticum SCRI1043 two-component system response regulator YP_051344.1 3641032 R 218491 CDS YP_051345.1 50122178 2885128 complement(3642366..3643202) 1 NC_004547.2 Similar to Yersinia pestis lipoprotein ypo2915 SWALL:Q8ZCQ6 (EMBL:AJ414154) (331 aa) fasta scores: E(): 7.9e-37, 45.45% id in 253 aa, and to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein yfhg or b2555 or z3831 or ecs3421 or sf2602 SWALL:YFHG_ECOLI (SWALL:P37328) (237 aa) fasta scores: E(): 3.6e-30, 45.61% id in 228 aa; hypothetical protein 3643202 2885128 ECA3256 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051345.1 3642366 R 218491 CDS YP_051346.1 50122179 2885129 complement(3643221..3644657) 1 NC_004547.2 Similar to Yersinia pestis two-component system sensor kinase ypo2916 or y1313 SWALL:Q8ZCQ5 (EMBL:AJ414154) (483 aa) fasta scores: E(): 5.4e-148, 79.91% id in 478 aa, and to Salmonella typhimurium sensory kinase in regulatory system yfhk or stm2564 SWALL:Q8ZN30 (EMBL:AE008816) (480 aa) fasta scores: E(): 6.7e-134, 73.67% id in 471 aa; two-component system sensor kinase 3644657 2885129 ECA3257 Pectobacterium atrosepticum SCRI1043 two-component system sensor kinase YP_051346.1 3643221 R 218491 CDS YP_051347.1 50122180 2881272 complement(3645506..3649390) 1 NC_004547.2 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase 3649390 purL 2881272 purL Pectobacterium atrosepticum SCRI1043 phosphoribosylformylglycinamidine synthase YP_051347.1 3645506 R 218491 CDS YP_051348.1 50122181 2885130 3649670..3651115 1 NC_004547.2 YfhD; uncharacterized member of the transglycosylase slt family; part of the rob operon, which plays a role in cellular resistance to antibiotics, bactericidal agents, and organic solvents; unknown function; transglycosylase 3651115 2885130 ECA3259 Pectobacterium atrosepticum SCRI1043 transglycosylase YP_051348.1 3649670 D 218491 CDS YP_051349.1 50122182 2883231 complement(3651263..3651787) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri hypothetical protein yfhc or b2559 or sf2606 SWALL:AAN44103 (EMBL:X72336) (178 aa) fasta scores: E(): 7.7e-49, 74.68% id in 158 aa, and to Salmonella typhimurium, and Salmonella typhi cytosine/adenosine deaminase yfhc or stm2568 or sty2814 SWALL:Q8XGY4 (EMBL:AE008817) (183 aa) fasta scores: E(): 1.1e-48, 75.31% id in 158 aa; tRNA-specific adenosine deaminase 3651787 2883231 ECA3260 Pectobacterium atrosepticum SCRI1043 tRNA-specific adenosine deaminase YP_051349.1 3651263 R 218491 CDS YP_051350.1 50122183 2883232 complement(3651837..3652475) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo2924 SWALL:Q8ZCP9 (EMBL:AJ414154) (215 aa) fasta scores: E(): 1.7e-62, 74.27% id in 206 aa, and to Salmonella typhimurium putatative phosphoserine phosphatase yfhb or stm2569 SWALL:Q8ZN27 (EMBL:AE008817) (211 aa) fasta scores: E(): 3e-62, 71.01% id in 207 aa; hypothetical protein 3652475 2883232 ECA3261 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051350.1 3651837 R 218491 CDS YP_051351.1 50122184 2883233 complement(3652523..3653449) 1 NC_004547.2 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; N-acetylmuramic acid 6-phosphate etherase 3653449 murQ 2883233 murQ Pectobacterium atrosepticum SCRI1043 N-acetylmuramic acid 6-phosphate etherase YP_051351.1 3652523 R 218491 CDS YP_051352.1 50122185 2883234 3653727..3654416 1 NC_004547.2 Similar to Pseudomonas putida conserved hypothetical protein pp0164 SWALL:AAN65797 (EMBL:AE016774) (213 aa) fasta scores: E(): 5.6e-51, 59.9% id in 207 aa, and to Vibrio vulnificus predicted periplasmic protein vv21126 SWALL:AAO08027 (EMBL:AE016812) (237 aa) fasta scores: E(): 2e-31, 44.87% id in 205 aa; hypothetical protein 3654416 2883234 ECA3263 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051352.1 3653727 D 218491 CDS YP_051353.1 50122186 2885299 3654426..3656378 1 NC_004547.2 Similar to Pseudomonas putida GGDEF domain protein pp0165 SWALL:AAN65798 (EMBL:AE016774) (648 aa) fasta scores: E(): 8e-140, 56.7% id in 649 aa, and to Vibrio vulnificus fog: EAL domain protein vv21127 SWALL:AAO08028 (EMBL:AE016812) (639 aa) fasta scores: E(): 2.7e-33, 26.2% id in 641 aa; signaling membrane protein 3656378 2885299 ECA3264 Pectobacterium atrosepticum SCRI1043 signaling membrane protein YP_051353.1 3654426 D 218491 CDS YP_051354.1 50122187 2885300 complement(3656500..3656844) 1 NC_004547.2 hypothetical protein 3656844 2885300 ECA3265 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051354.1 3656500 R 218491 CDS YP_051355.1 50122188 2885301 complement(3656910..3670586) 1 NC_004547.2 Similar to Ralstonia solanacearum hemagglutinin/hemolysin-related protein rsp1180 or rs05070 SWALL:Q8XQP2 (EMBL:AL646083) (4106 aa) fasta scores: E(): 3.1e-134, 29.53% id in 4320 aa, and to Aeromonas salmonicida Rtx protein Asx SWALL:Q9L800 (EMBL:AF218037) (2747 aa) fasta scores: E(): 1.3e-47, 28.2% id in 2822 aa; hemagglutinin/hemolysin-like protein 3670586 2885301 ECA3266 Pectobacterium atrosepticum SCRI1043 hemagglutinin/hemolysin-like protein YP_051355.1 3656910 R 218491 CDS YP_051356.1 50122189 2883213 3670963..3672315 1 NC_004547.2 Similar to Pseudomonas putida agglutination protein precursor AggA SWALL:Q52018 (EMBL:M64540) (452 aa) fasta scores: E(): 4e-73, 47.27% id in 440 aa, and to Vibrio cholerae agglutination protein vc1621 SWALL:Q9KRL6 (EMBL:AE004240) (445 aa) fasta scores: E(): 1.6e-51, 36.58% id in 421 aa; agglutination protein 3672315 aggA 2883213 aggA Pectobacterium atrosepticum SCRI1043 agglutination protein YP_051356.1 3670963 D 218491 CDS YP_051357.1 50122190 2884561 3672395..3674611 1 NC_004547.2 Similar to Actinobacillus pleuropneumoniae Rtx-I toxin determinant B Apxib or clyib or hlyib or appB SWALL:RT1B_ACTPL (SWALL:P26760) (707 aa) fasta scores: E(): 1.1e-55, 28.05% id in 695 aa, and to Pseudomonas putida toxin secretion ATP-binding protein pp0167 SWALL:AAN65800 (EMBL:AE016774) (718 aa) fasta scores: E(): 1.1e-188, 69.83% id in 706 aa, and to Pasteurella haemolytica leukotoxin secretion ATP-binding protein lktB SWALL:HLYB_PASHA (SWALL:P16532) (708 aa) fasta scores: E(): 1.1e-55, 27.84% id in 686 aa; toxin secretion ATP-binding protein 3674611 2884561 ECA3268 Pectobacterium atrosepticum SCRI1043 toxin secretion ATP-binding protein YP_051357.1 3672395 D 218491 CDS YP_051358.1 50122191 2884562 3674598..3675959 1 NC_004547.2 Similar to Rhizobium leguminosarum PrsE protein prsE SWALL:O05694 (EMBL:Y12758) (435 aa) fasta scores: E(): 4.6e-27, 29.72% id in 434 aa, and to Pseudomonas putida HlyD family secretion protein pp0166 SWALL:AAN65799 (EMBL:AE016774) (458 aa) fasta scores: E(): 1.9e-103, 65.19% id in 454 aa; HlyD family secretion protein 3675959 2884562 ECA3269 Pectobacterium atrosepticum SCRI1043 HlyD family secretion protein YP_051358.1 3674598 D 218491 CDS YP_051359.1 50122192 2884563 complement(3676002..3677516) 1 NC_004547.2 Similar to Rhizobium meliloti hypothetical protein r00959 or smc00038 SWALL:Q92KJ3 (EMBL:AL591785) (772 aa) fasta scores: E(): 1e-48, 35.35% id in 461 aa, and to Xanthomonas campestris c-di-gmp phosphodiesterase A PdeA or xcc1865 SWALL:Q8P9J8 (EMBL:AE012289) (726 aa) fasta scores: E(): 1.1e-41, 31.81% id in 462 aa; hypothetical protein 3677516 2884563 ECA3270 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051359.1 3676002 R 218491 CDS YP_051360.1 50122193 2884564 complement(3678304..3679095) 1 NC_004547.2 in Escherichia coli this protein is involved in flagellar function; diguanylate phosphodiesterase 3679095 2884564 ECA3271 Pectobacterium atrosepticum SCRI1043 diguanylate phosphodiesterase YP_051360.1 3678304 R 218491 CDS YP_051361.1 50122194 2882588 complement(3679113..3679367) 1 NC_004547.2 hypothetical protein 3679367 2882588 ECA3272 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051361.1 3679113 R 218491 CDS YP_051362.1 50122195 2882589 3679566..3679826 1 NC_004547.2 Similar to Escherichia coli O6 ferredoxin-like protein yfhl or c3086 SWALL:AAN81535 (EMBL:AE016764) (86 aa) fasta scores: E(): 4.5e-28, 82.55% id in 86 aa, and to Salmonella typhimurium ferredoxin yfhl or stm2576 SWALL:Q8ZN20 (EMBL:AE008817) (86 aa) fasta scores: E(): 2.3e-27, 79.06% id in 86 aa; ferredoxin 3679826 2882589 ECA3273 Pectobacterium atrosepticum SCRI1043 ferredoxin YP_051362.1 3679566 D 218491 CDS YP_051363.1 50122196 2884689 complement(3679845..3680225) 1 NC_004547.2 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 3680225 acpS 2884689 acpS Pectobacterium atrosepticum SCRI1043 4'-phosphopantetheinyl transferase YP_051363.1 3679845 R 218491 CDS YP_051364.1 50122197 2882129 complement(3680225..3680956) 1 NC_004547.2 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 3680956 pdxJ 2882129 pdxJ Pectobacterium atrosepticum SCRI1043 pyridoxine 5'-phosphate synthase YP_051364.1 3680225 R 218491 CDS YP_051365.1 50122198 2885107 complement(3681037..3681774) 1 NC_004547.2 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; DNA repair protein RecO 3681774 recO 2885107 recO Pectobacterium atrosepticum SCRI1043 DNA repair protein RecO YP_051365.1 3681037 R 218491 CDS YP_051366.1 50122199 2884535 complement(3681786..3682691) 1 NC_004547.2 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 3682691 era 2884535 era Pectobacterium atrosepticum SCRI1043 GTP-binding protein Era YP_051366.1 3681786 R 218491 CDS YP_051367.1 50122200 2885047 complement(3682688..3683368) 1 NC_004547.2 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 3683368 rnc 2885047 rnc Pectobacterium atrosepticum SCRI1043 ribonuclease III YP_051367.1 3682688 R 218491 CDS YP_051368.1 50122201 2883503 complement(3683661..3684626) 1 NC_004547.2 catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; signal peptidase I 3684626 lepB 2883503 lepB Pectobacterium atrosepticum SCRI1043 signal peptidase I YP_051368.1 3683661 R 218491 CDS YP_051369.1 50122202 2883632 complement(3684643..3686442) 1 NC_004547.2 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 3686442 lepA 2883632 lepA Pectobacterium atrosepticum SCRI1043 GTP-binding protein LepA YP_051369.1 3684643 R 218491 CDS YP_051370.1 50122203 2884454 complement(3686739..3687191) 1 NC_004547.2 involved in the reduction of the SoxR iron-sulfur cluster; SoxR reducing system protein RseC 3687191 rseC 2884454 rseC Pectobacterium atrosepticum SCRI1043 SoxR reducing system protein RseC YP_051370.1 3686739 R 218491 CDS YP_051371.1 50122204 2884453 complement(3687188..3688150) 1 NC_004547.2 periplasmic protein; interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP; periplasmic negative regulator of sigmaE 3688150 rseB 2884453 rseB Pectobacterium atrosepticum SCRI1043 periplasmic negative regulator of sigmaE YP_051371.1 3687188 R 218491 CDS YP_051372.1 50122205 2884452 complement(3688150..3688797) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 sigma-E factor negative regulatory protein RseA or MclA or b2572 or c3096 SWALL:RSEA_ECOLI (SWALL:P38106) (216 aa) fasta scores: E(): 9.8e-48, 62.21% id in 217 aa; anti-RNA polymerase sigma factor SigE 3688797 rseA 2884452 rseA Pectobacterium atrosepticum SCRI1043 anti-RNA polymerase sigma factor SigE YP_051372.1 3688150 R 218491 CDS YP_051373.1 50122206 2884483 complement(3688857..3689432) 1 NC_004547.2 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; RNA polymerase sigma factor RpoE 3689432 rpoE 2884483 rpoE Pectobacterium atrosepticum SCRI1043 RNA polymerase sigma factor RpoE YP_051373.1 3688857 R 218491 CDS YP_051374.1 50122207 2885166 3689812..3691413 1 NC_004547.2 catalyzes the formation of oxaloacetate from L-aspartate; L-aspartate oxidase 3691413 nadB 2885166 nadB Pectobacterium atrosepticum SCRI1043 L-aspartate oxidase YP_051374.1 3689812 D 218491 CDS YP_051375.1 50122208 2882590 complement(3691502..3692248) 1 NC_004547.2 Similar to Escherichia coli O157:H7 enzyme yfic or z3857 or ecs3441 SWALL:Q8XA22 (EMBL:AE005488) (285 aa) fasta scores: E(): 5.8e-52, 58.4% id in 238 aa, and to Salmonella typhimurium transferase yfic or stm2642 SWALL:Q8ZMX8 (EMBL:AE008820) (245 aa) fasta scores: E(): 9.4e-52, 57.14% id in 238 aa; hypothetical protein 3692248 2882590 ECA3286 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051375.1 3691502 R 218491 CDS YP_051376.1 50122209 2884355 3692383..3693708 1 NC_004547.2 facilitates an early step in the assembly of the 50S subunit of the ribosome; ATP-dependent RNA helicase SrmB 3693708 srmB 2884355 srmB Pectobacterium atrosepticum SCRI1043 ATP-dependent RNA helicase SrmB YP_051376.1 3692383 D 218491 CDS YP_051377.1 50122210 2885183 complement(3693778..3694161) 1 NC_004547.2 stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit; autonomous glycyl radical cofactor GrcA 3694161 2885183 ECA3288 Pectobacterium atrosepticum SCRI1043 autonomous glycyl radical cofactor GrcA YP_051377.1 3693778 R 218491 CDS YP_051378.1 50122211 2882935 3694571..3695257 1 NC_004547.2 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 3695257 ung 2882935 ung Pectobacterium atrosepticum SCRI1043 uracil-DNA glycosylase YP_051378.1 3694571 D 218491 CDS YP_051379.1 50122212 2885184 3695855..3696739 1 NC_004547.2 Similar to Escherichia coli IroE protein SWALL:Q93K72 (EMBL:X16664) (318 aa) fasta scores: E(): 2e-18, 28.94% id in 304 aa, and to Campylobacter jejuni periplasmic protein cj1376 SWALL:Q9PMS4 (EMBL:AL139078) (269 aa) fasta scores: E(): 1.9e-19, 32.45% id in 265 aa; hypothetical protein 3696739 2885184 ECA3290 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051379.1 3695855 D 218491 CDS YP_051380.1 50122213 2882140 complement(3696813..3698228) 1 NC_004547.2 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 3698228 gltX 2882140 gltX Pectobacterium atrosepticum SCRI1043 glutamyl-tRNA synthetase YP_051380.1 3696813 R 218491 CDS YP_051381.1 50122214 2885185 complement(3699110..3700216) 1 NC_004547.2 Similar to Caulobacter crescentus fmn oxidoreductase cc2129 SWALL:Q9A6G5 (EMBL:AE005885) (363 aa) fasta scores: E(): 8.2e-85, 61.14% id in 368 aa, and to Streptomyces coelicolor oxidoreduxtase sco4297 or scd95a.30 SWALL:Q9KXU4 (EMBL:AL939119) (376 aa) fasta scores: E(): 2.7e-75, 55.31% id in 367 aa; oxidoreductase 3700216 2885185 ECA3292 Pectobacterium atrosepticum SCRI1043 oxidoreductase YP_051381.1 3699110 R 218491 CDS YP_051382.1 50122215 2885577 3700404..3701453 1 NC_004547.2 Similar to Rhizobium loti norsolorinic acid reductase mll1952 SWALL:Q98JG7 (EMBL:AP002998) (348 aa) fasta scores: E(): 1.6e-69, 55.58% id in 349 aa, and to Xanthomonas campestris rhizopine catabolism protein moca or xcc3724 SWALL:Q8P4I3 (EMBL:AE012493) (356 aa) fasta scores: E(): 6.5e-46, 45.37% id in 346 aa; oxidoreductase 3701453 2885577 ECA3293 Pectobacterium atrosepticum SCRI1043 oxidoreductase YP_051382.1 3700404 D 218491 CDS YP_051383.1 50122216 2885578 3701538..3702119 1 NC_004547.2 Similar to Rhizobium meliloti transcriptional regulator ra1038 or sma1887 SWALL:Q92Y50 (EMBL:AE007290) (200 aa) fasta scores: E(): 2.6e-23, 41.48% id in 188 aa, and to Agrobacterium tumefaciens transcriptional regulator, TetR family atu4217 or agr_l_1283 SWALL:Q8U882 (EMBL:AE009351) (199 aa) fasta scores: E(): 5.5e-23, 42.07% id in 183 aa; TetR family transcriptional regulator 3702119 2885578 ECA3294 Pectobacterium atrosepticum SCRI1043 TetR family transcriptional regulator YP_051383.1 3701538 D 218491 CDS YP_051384.1 50122217 2885579 3702410..3702844 1 NC_004547.2 Similar to Chlorobium tepidum hypothetical protein Ct0748 SWALL:Q8KEE1 (EMBL:AE012845) (133 aa) fasta scores: E(): 1.8e-18, 48% id in 125 aa, and to Nitrosomonas europaea hypothetical protein ne1276 SWALL:CAD85187 (EMBL:BX321860) (134 aa) fasta scores: E(): 1.9e-16, 43.54% id in 124 aa; hypothetical protein 3702844 2885579 ECA3295 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051384.1 3702410 D 218491 CDS YP_051385.1 50122218 2882242 complement(3702925..3703917) 1 NC_004547.2 Similar to Escherichia coli sulfate/thiosulfate import ATP-binding protein CysA or b2422 SWALL:CYSA_ECOLI (SWALL:P16676) (365 aa) fasta scores: E(): 2e-56, 53.54% id in 353 aa; sulfate ABC transporter ATP-binding protein 3703917 cysA 2882242 cysA Pectobacterium atrosepticum SCRI1043 sulfate ABC transporter ATP-binding protein YP_051385.1 3702925 R 218491 CDS YP_051386.1 50122219 2885580 complement(3703907..3704788) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 sulfate transport system permease protein CysW or b2423 or c2957 SWALL:CYSW_ECOLI (SWALL:P16702) (291 aa) fasta scores: E(): 1.3e-52, 47.93% id in 290 aa; sulfate ABC transporter permease 3704788 2885580 ECA3297 Pectobacterium atrosepticum SCRI1043 sulfate ABC transporter permease YP_051386.1 3703907 R 218491 CDS YP_051387.1 50122220 2881424 complement(3704801..3705613) 1 NC_004547.2 Similar to Escherichia coli sulfate transport system permease protein CysU or CysT or b2424 SWALL:CYST_ECOLI (SWALL:P16701) (277 aa) fasta scores: E(): 4e-45, 46.21% id in 264 aa; sulfate ABC transporter permease 3705613 cysU 2881424 cysU Pectobacterium atrosepticum SCRI1043 sulfate ABC transporter permease YP_051387.1 3704801 R 218491 CDS YP_051388.1 50122221 2884428 complement(3705770..3706780) 1 NC_004547.2 Similar to Escherichia coli sulfate-binding protein precursor Sbp or b3917 SWALL:SUBI_ECOLI (SWALL:P06997) (329 aa) fasta scores: E(): 8e-77, 61.46% id in 327 aa; sulfate-binding protein 3706780 sbp 2884428 sbp Pectobacterium atrosepticum SCRI1043 sulfate-binding protein YP_051388.1 3705770 R 218491 CDS YP_051389.1 50122222 2881779 complement(3707103..3708260) 1 NC_004547.2 regulates the expression of the operons for the enzymes involved in galactarate, glucarate and glycerate utilization; carbohydrate diacid transcriptional activator CdaR 3708260 cdaR 2881779 cdaR Pectobacterium atrosepticum SCRI1043 carbohydrate diacid transcriptional activator CdaR YP_051389.1 3707103 R 218491 CDS YP_051390.1 50122223 2881921 complement(3708493..3709959) 1 NC_004547.2 protease Do; required at high temperature; degrades damaged proteins; serine endoprotease 3709959 degP 2881921 degP Pectobacterium atrosepticum SCRI1043 serine endoprotease YP_051390.1 3708493 R 218491 CDS YP_051391.1 50122224 2883364 complement(3710149..3711660) 1 NC_004547.2 forms a homotetramer; requires magnesium for activity; catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate; deoxyguanosinetriphosphate triphosphohydrolase 3711660 dgt 2883364 dgt Pectobacterium atrosepticum SCRI1043 deoxyguanosinetriphosphate triphosphohydrolase YP_051391.1 3710149 R 218491 CDS YP_051392.1 50122225 2881745 3711890..3712588 1 NC_004547.2 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 3712588 mtn 2881745 mtn Pectobacterium atrosepticum SCRI1043 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_051392.1 3711890 D 218491 CDS YP_051393.1 50122226 2882297 3712592..3713431 1 NC_004547.2 solute binding component of the vitamin B12 transport system BtuCDF; vitamin B12-transporter protein BtuF 3713431 btuF 2882297 btuF Pectobacterium atrosepticum SCRI1043 vitamin B12-transporter protein BtuF YP_051393.1 3712592 D 218491 CDS YP_051394.1 50122227 2881825 3713650..3713928 1 NC_004547.2 Similar to Escherichia coli hypothetical protein ymda precursor ymda or b1044 SWALL:YMDA_ECOLI (SWALL:P75917) (103 aa) fasta scores: E(): 3.1, 26.19% id in 84 aa, and to Shigella flexneri orf, conserved hypothetical protein sf1040 SWALL:AAN42662 (EMBL:AE015132) (103 aa) fasta scores: E(): 4.2, 25% id in 84 aa; lipoprotein 3713928 2881825 ECA3305 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_051394.1 3713650 D 218491 CDS YP_051395.1 50122228 2881826 complement(3714188..3714535) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein yadr or b0156 or c0191 or z0167 or ecs0160 or sf0148 SWALL:YADR_ECOLI (SWALL:P37026) (114 aa) fasta scores: E(): 1.7e-38, 89.56% id in 115 aa, and to Yersinia pestis hypothetical protein Ypo3387 SWALL:Q8ZBM1 (EMBL:AJ414156) (114 aa) fasta scores: E(): 2.8e-37, 88.69% id in 115 aa; hypothetical protein 3714535 2881826 ECA3306 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051395.1 3714188 R 218491 CDS YP_051396.1 50122229 2882212 3714803..3716083 1 NC_004547.2 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 3716083 hemL 2882212 hemL Pectobacterium atrosepticum SCRI1043 glutamate-1-semialdehyde aminotransferase YP_051396.1 3714803 D 218491 CDS YP_051397.1 50122230 2881827 complement(3716161..3717621) 1 NC_004547.2 Similar to Yersinia pestis similar to tyrosine aminotransferase ypo1960 SWALL:Q9ZC65 (EMBL:AL031866) (473 aa) fasta scores: E(): 1.5e-54, 34.53% id in 472 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4132 SWALL:Q9HWP9 (EMBL:AE004829) (471 aa) fasta scores: E(): 9e-61, 38.18% id in 474 aa; aminotransferase 3717621 2881827 ECA3308 Pectobacterium atrosepticum SCRI1043 aminotransferase YP_051397.1 3716161 R 218491 CDS YP_051398.1 50122231 2885167 3717757..3718347 1 NC_004547.2 Similar to Rhizobium meliloti hypothetical transmembrane protein smc01425 r02108 or smc01425 SWALL:Q92NS0 (EMBL:AL591789) (197 aa) fasta scores: E(): 2.7e-22, 39.68% id in 189 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2306 SWALL:Q9I1G9 (EMBL:AE004657) (205 aa) fasta scores: E(): 3e-20, 37.37% id in 198 aa; hypothetical protein 3718347 2885167 ECA3309 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051398.1 3717757 D 218491 CDS YP_051399.1 50122232 2882286 complement(3718385..3720403) 1 NC_004547.2 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; iron-hydroxamate transporter permease subunit 3720403 fhuB 2882286 fhuB Pectobacterium atrosepticum SCRI1043 iron-hydroxamate transporter permease subunit YP_051399.1 3718385 R 218491 CDS YP_051400.1 50122233 2882277 complement(3720396..3721319) 1 NC_004547.2 Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; binds to all hydroxamate siderophores; iron-hydroxamate transporter substrate-binding subunit 3721319 fhuD 2882277 fhuD Pectobacterium atrosepticum SCRI1043 iron-hydroxamate transporter substrate-binding subunit YP_051400.1 3720396 R 218491 CDS YP_051401.1 50122234 2882287 complement(3721339..3722136) 1 NC_004547.2 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; iron-hydroxamate transporter ATP-binding subunit 3722136 fhuC 2882287 fhuC Pectobacterium atrosepticum SCRI1043 iron-hydroxamate transporter ATP-binding subunit YP_051401.1 3721339 R 218491 CDS YP_051402.1 50122235 2882045 complement(3722451..3724928) 1 NC_004547.2 bifunctional periplasmic enzyme; contains transglycosylase and transpeptidase activity; major enzyme for peptidoglycan biosynthesis in Escherichia coli; transmembrane protein; forms dimers; three variants, one of which may be a degradation product, while the other appears to result from an alternative initiation site, are found within the cell; penicillin-binding protein 1b 3724928 mrcB 2882045 mrcB Pectobacterium atrosepticum SCRI1043 penicillin-binding protein 1b YP_051402.1 3722451 R 218491 CDS YP_051403.1 50122236 2885168 complement(3725031..3727511) 1 NC_004547.2 similar in sequence to the ATP-dependent RNA helicase HrpA; ATP-dependent RNA helicase HrpB 3727511 2885168 ECA3314 Pectobacterium atrosepticum SCRI1043 ATP-dependent RNA helicase HrpB YP_051403.1 3725031 R 218491 CDS YP_051404.1 50122237 2883209 3727604..3728134 1 NC_004547.2 Similar to Escherichia coli 2'-5' RNA ligase LigT or b0147 SWALL:LIGT_ECOLI (SWALL:P37025) (175 aa) fasta scores: E(): 8.7e-42, 60.57% id in 175 aa; 2'-5' RNA ligase 3728134 ligT 2883209 ligT Pectobacterium atrosepticum SCRI1043 2'-5' RNA ligase YP_051404.1 3727604 D 218491 CDS YP_051405.1 50122238 2884401 3728155..3728859 1 NC_004547.2 Regulatory factor involved in maltose metabolism; sugar fermentation stimulation protein A 3728859 sfsA 2884401 sfsA Pectobacterium atrosepticum SCRI1043 sugar fermentation stimulation protein A YP_051405.1 3728155 D 218491 CDS YP_051406.1 50122239 2883260 3729128..3729583 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri dnak suppressor protein DksA or b0145 or c0178 or z0156 or ecs0149 or sf0137 SWALL:DKSA_ECOLI (SWALL:P18274) (151 aa) fasta scores: E(): 1.9e-52, 94.04% id in 151 aa; RNA polymerase-binding transcription factor 3729583 dksA 2883260 dksA Pectobacterium atrosepticum SCRI1043 RNA polymerase-binding transcription factor YP_051406.1 3729128 D 218491 CDS YP_051407.1 50122240 2885169 3729711..3730679 1 NC_004547.2 this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; glutamyl-Q tRNA(Asp) synthetase 3730679 2885169 ECA3318 Pectobacterium atrosepticum SCRI1043 glutamyl-Q tRNA(Asp) synthetase YP_051407.1 3729711 D 218491 CDS YP_051408.1 50122241 2881375 3730782..3732230 1 NC_004547.2 Polymerase that creates the 3' poly(A) tail found in some mRNA's; poly(A) polymerase 3732230 pcnB 2881375 pcnB Pectobacterium atrosepticum SCRI1043 poly(A) polymerase YP_051408.1 3730782 D 218491 CDS YP_051409.1 50122242 2885249 3732230..3732727 1 NC_004547.2 Similar to Escherichia coli 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase FolK or b0142 SWALL:HPPK_ECOLI (SWALL:P26281) (158 aa) fasta scores: E(): 1.5e-39, 67.08% id in 158 aa; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 3732727 folK 2885249 folK Pectobacterium atrosepticum SCRI1043 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_051409.1 3732230 D 218491 CDS YP_051410.1 50122243 2881781 3732844..3733638 1 NC_004547.2 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 3733638 panB 2881781 panB Pectobacterium atrosepticum SCRI1043 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_051410.1 3732844 D 218491 CDS YP_051411.1 50122244 2881782 3733793..3734647 1 NC_004547.2 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 3734647 panC 2881782 panC Pectobacterium atrosepticum SCRI1043 pantoate--beta-alanine ligase YP_051411.1 3733793 D 218491 CDS YP_051412.1 50122245 2881847 3734665..3735045 1 NC_004547.2 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 3735045 panD 2881847 panD Pectobacterium atrosepticum SCRI1043 aspartate alpha-decarboxylase YP_051412.1 3734665 D 218491 CDS YP_051413.1 50122246 2885170 complement(3735108..3735878) 1 NC_004547.2 Similar to Salmonella typhi ABC transporter integral membrane protein sty0195 SWALL:Q8Z9D6 (EMBL:AL627265) (256 aa) fasta scores: E(): 1.6e-82, 83.59% id in 256 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein yadh or b0128 or c0157 or z0139 or ecs0132 or sf0125 SWALL:YADH_ECOLI (SWALL:P36880) (256 aa) fasta scores: E(): 1.3e-81, 82.42% id in 256 aa; ABC transporter 3735878 2885170 ECA3324 Pectobacterium atrosepticum SCRI1043 ABC transporter YP_051413.1 3735108 R 218491 CDS YP_051414.1 50122247 2885723 complement(3735875..3736813) 1 NC_004547.2 Similar to Yersinia pestis ABC transporter, ATP-binding protein ypo3406 or y0780 SWALL:AAM84367 (EMBL:AJ414157) (308 aa) fasta scores: E(): 3.2e-91, 85.25% id in 312 aa, and to Escherichia coli hypothetical ABC transporter ATP-binding protein yadg or b0127 SWALL:YADG_ECOLI (SWALL:P36879) (308 aa) fasta scores: E(): 6.1e-88, 85.05% id in 301 aa; ABC transporter ATP-binding protein 3736813 2885723 ECA3325 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_051414.1 3735875 R 218491 CDS YP_051415.1 50122248 2885724 complement(3736845..3737012) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo0143 SWALL:Q8ZJG5 (EMBL:AJ414141) (64 aa) fasta scores: E(): 0.019, 55.55% id in 36 aa; hypothetical protein 3737012 2885724 ECA3326 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051415.1 3736845 R 218491 CDS YP_051416.1 50122249 2885725 3737076..3737717 1 NC_004547.2 catalyzes the interconversion of bicarbonate and carbon dioxide; carbonic anhydrase 3737717 2885725 ECA3327 Pectobacterium atrosepticum SCRI1043 carbonic anhydrase YP_051416.1 3737076 D 218491 CDS YP_051417.2 161501871 2885421 complement(3737777..3738310) 1 NC_004547.2 Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; hypoxanthine-guanine phosphoribosyltransferase 3738310 hpt 2885421 hpt Pectobacterium atrosepticum SCRI1043 hypoxanthine-guanine phosphoribosyltransferase YP_051417.2 3737777 R 218491 CDS YP_051418.1 50122251 2884615 3738463..3738897 1 NC_004547.2 Similar to Pasteurella multocida hypothetical protein Pm1553 SWALL:Q9CKQ3 (EMBL:AE006192) (130 aa) fasta scores: E(): 7.8e-28, 58.73% id in 126 aa, and to Rhizobium loti hypothetical protein Mlr4407 SWALL:Q98E50 (EMBL:AP003004) (165 aa) fasta scores: E(): 1.3e-14, 39.69% id in 131 aa; acetyltransferase 3738897 2884615 ECA3329 Pectobacterium atrosepticum SCRI1043 acetyltransferase YP_051418.1 3738463 D 218491 CDS YP_051419.1 50122252 2884616 complement(3738898..3739983) 1 NC_004547.2 Similar to Pasteurella haemolytica ATPase FbpC SWALL:Q9ZHY0 (EMBL:AF047427) (336 aa) fasta scores: E(): 8.5e-53, 44.57% id in 341 aa, and to Vibrio vulnificus ABC-type spermidine/putrescine transport system, ATPase component vv11663 SWALL:AAO10080 (EMBL:AE016802) (342 aa) fasta scores: E(): 1.3e-51, 44.14% id in 333 aa; ATP transporter ATP-binding protein 3739983 2884616 ECA3330 Pectobacterium atrosepticum SCRI1043 ATP transporter ATP-binding protein YP_051419.1 3738898 R 218491 CDS YP_051420.1 50122253 2884617 complement(3739988..3741673) 1 NC_004547.2 Similar to Vibrio cholerae iron vc0609 SWALL:Q9KUB4 (EMBL:AE004146) (541 aa) fasta scores: E(): 2.7e-75, 41.11% id in 540 aa, and to Pasteurella multocida fbpb fbpb or pm0050 SWALL:Q9CPI8 (EMBL:AE006038) (552 aa) fasta scores: E(): 6.1e-78, 41.3% id in 552 aa; ABC transporter permease 3741673 2884617 ECA3331 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_051420.1 3739988 R 218491 CDS YP_051421.1 50122254 2881370 3742043..3742390 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo3410 or y0776 SWALL:Q8ZBJ9 (EMBL:AJ414157) (115 aa) fasta scores: E(): 1.6e-30, 69.29% id in 114 aa, and to Escherichia coli, and Escherichia coli O6 hypothetical protein yacc precursor yacc or b0122 or c0151 SWALL:YACC_ECOLI (SWALL:P23838) (115 aa) fasta scores: E(): 1.6e-27, 64.34% id in 115 aa; hypothetical protein 3742390 2881370 ECA3332 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051421.1 3742043 D 218491 CDS YP_051422.1 50122255 2884367 3742499..3743362 1 NC_004547.2 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 3743362 speE 2884367 speE Pectobacterium atrosepticum SCRI1043 spermidine synthase YP_051422.1 3742499 D 218491 CDS YP_051423.1 50122256 2884366 3743408..3744202 1 NC_004547.2 S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; S-adenosylmethionine decarboxylase 3744202 speD 2884366 speD Pectobacterium atrosepticum SCRI1043 S-adenosylmethionine decarboxylase YP_051423.1 3743408 D 218491 CDS YP_051424.1 50122257 2881812 3744803..3745042 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri glutaredoxin-like protein NrdH or b2673 or c3226 or z3975 or ecs3536 or sf2701 SWALL:NRDH_ECOLI (SWALL:Q47414) (81 aa) fasta scores: E(): 4.2e-11, 45.33% id in 75 aa; glutaredoxin 3745042 nrdH 2881812 nrdH Pectobacterium atrosepticum SCRI1043 glutaredoxin YP_051424.1 3744803 D 218491 CDS YP_051425.1 50122258 2881813 3745052..3745459 1 NC_004547.2 in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; ribonucleotide reductase stimulatory protein 3745459 nrdI 2881813 nrdI Pectobacterium atrosepticum SCRI1043 ribonucleotide reductase stimulatory protein YP_051425.1 3745052 D 218491 CDS YP_051426.1 50122259 2881809 3745456..3747603 1 NC_004547.2 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 3747603 nrdE 2881809 nrdE Pectobacterium atrosepticum SCRI1043 ribonucleotide-diphosphate reductase subunit alpha YP_051426.1 3745456 D 218491 CDS YP_051427.1 50122260 2881810 3747628..3748590 1 NC_004547.2 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 3748590 nrdF 2881810 nrdF Pectobacterium atrosepticum SCRI1043 ribonucleotide-diphosphate reductase subunit beta YP_051427.1 3747628 D 218491 CDS YP_051428.1 50122261 2882238 complement(3748958..3749695) 1 NC_004547.2 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 3749695 dnaQ 2882238 dnaQ Pectobacterium atrosepticum SCRI1043 DNA polymerase III subunit epsilon YP_051428.1 3748958 R 218491 CDS YP_051429.1 50122262 2881371 3749751..3750215 1 NC_004547.2 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 3750215 rnhA 2881371 rnhA Pectobacterium atrosepticum SCRI1043 ribonuclease H YP_051429.1 3749751 D 218491 CDS YP_051430.1 50122263 2881372 complement(3750235..3750945) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1080 or y3096 SWALL:AAM86646 (EMBL:AJ414146) (239 aa) fasta scores: E(): 6.6e-62, 61.86% id in 236 aa, and to Salmonella typhimurium sam-dependent methyltransferase yafs or stm0262 SWALL:Q8ZRM1 (EMBL:AE008707) (240 aa) fasta scores: E(): 6.6e-60, 59.07% id in 237 aa; hypothetical protein 3750945 2881372 ECA3341 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051430.1 3750235 R 218491 CDS YP_051431.1 50122264 2881322 3750989..3751744 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 probable hydroxyacylglutathione hydrolase glob or b0212 or z0236 or ecs0208 SWALL:GLO2_ECOLI (SWALL:Q47677) (251 aa) fasta scores: E(): 1.2e-56, 56.17% id in 251 aa, and to Photorhabdus luminescens GloB gloB SWALL:AAO17226 (EMBL:AF346500) (250 aa) fasta scores: E(): 4.1e-57, 54.98% id in 251 aa; hydroxyacylglutathione hydrolase 3751744 gloB 2881322 gloB Pectobacterium atrosepticum SCRI1043 hydroxyacylglutathione hydrolase YP_051431.1 3750989 D 218491 CDS YP_051432.1 50122265 2885532 3751815..3753179 1 NC_004547.2 catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; may play a role in recycling muropeptides during cell division and/or cell elongation; in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall; membrane-bound lytic murein transglycosylase D 3753179 mltD 2885532 mltD Pectobacterium atrosepticum SCRI1043 membrane-bound lytic murein transglycosylase D YP_051432.1 3751815 D 218491 CDS YP_051433.1 50122266 2881373 complement(3753249..3754037) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein yafd yafd or b0209 or c0246 or z0232 or ecs0205 or sf0195 SWALL:YAFD_ECOLI (SWALL:P30865) (266 aa) fasta scores: E(): 2.4e-76, 71.53% id in 260 aa, and to Salmonella typhimurium cytoplasmic protein yafd or stm0258 SWALL:Q8ZRM4 (EMBL:AE008706) (259 aa) fasta scores: E(): 1.5e-74, 71.54% id in 253 aa; hypothetical protein 3754037 2881373 ECA3344 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051433.1 3753249 R 218491 CDS YP_051434.1 50122267 2884958 complement(3760023..3762599) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 ClpB protein ClpB or HtpM or b2592 or c3114 or z3886 or ecs3455 SWALL:CLPB_ECOLI (SWALL:P03815) (857 aa) fasta scores: E(): 0, 85.64% id in 857 aa; protein disaggregation chaperone 3762599 clpB 2884958 clpB Pectobacterium atrosepticum SCRI1043 protein disaggregation chaperone YP_051434.1 3760023 R 218491 CDS YP_051435.1 50122268 2882609 complement(3762733..3763458) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3276 or y0913 SWALL:Q8ZBV8 (EMBL:AJ414156) (243 aa) fasta scores: E(): 1.6e-62, 66.25% id in 240 aa, and to Salmonella typhi hypothetical protein Sty2850 SWALL:Q8Z4J1 (EMBL:AL627276) (243 aa) fasta scores: E(): 9.7e-62, 64.16% id in 240 aa; hypothetical protein 3763458 2882609 ECA3346 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051435.1 3762733 R 218491 CDS YP_051436.1 50122269 2885050 complement(3763501..3764478) 1 NC_004547.2 responsible for synthesis of pseudouridine from uracil at positions 1911, 1915 and 1917 in 23S ribosomal RNA; 23S rRNA pseudouridine synthase D 3764478 rluD 2885050 rluD Pectobacterium atrosepticum SCRI1043 23S rRNA pseudouridine synthase D YP_051436.1 3763501 R 218491 CDS YP_051437.1 50122270 2882610 3764613..3765347 1 NC_004547.2 with YaeT, NlpB and YfgL forms a complex involved in the proper assembly and/or targeting of OMPs to the outer membrane; involved in resistance to ampicillin and tetracycline; outer membrane protein assembly complex subunit YfiO 3765347 2882610 ECA3348 Pectobacterium atrosepticum SCRI1043 outer membrane protein assembly complex subunit YfiO YP_051437.1 3764613 D 218491 CDS YP_051438.1 50122271 2882611 3765670..3766011 1 NC_004547.2 Similar to Yersinia pestis sigma 54 modulation protein ypo3279 SWALL:Q8ZBV5 (EMBL:AJ414156) (120 aa) fasta scores: E(): 3.7e-34, 84.95% id in 113 aa, and to Salmonella typhimurium, and Salmonella typhi ribosome associated factor, stabilizes ribosomes against dissociation yfia or stm2665 or sty2853 SWALL:Q8XEX6 (EMBL:AE008821) (112 aa) fasta scores: E(): 8.3e-31, 79.46% id in 112 aa; sigma(54) modulation protein 3766011 2882611 ECA3349 Pectobacterium atrosepticum SCRI1043 sigma(54) modulation protein YP_051438.1 3765670 D 218491 CDS YP_051439.1 50122272 2884541 3766362..3767522 1 NC_004547.2 catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; bifunctional chorismate mutase/prephenate dehydratase 3767522 pheA 2884541 pheA Pectobacterium atrosepticum SCRI1043 bifunctional chorismate mutase/prephenate dehydratase YP_051439.1 3766362 D 218491 CDS YP_051440.1 50122273 2884223 complement(3767623..3768744) 1 NC_004547.2 catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; bifunctional chorismate mutase/prephenate dehydrogenase 3768744 tyrA 2884223 tyrA Pectobacterium atrosepticum SCRI1043 bifunctional chorismate mutase/prephenate dehydrogenase YP_051440.1 3767623 R 218491 CDS YP_051441.1 50122274 2884129 complement(3768751..3769824) 1 NC_004547.2 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; phospho-2-dehydro-3-deoxyheptonate aldolase 3769824 aroF 2884129 aroF Pectobacterium atrosepticum SCRI1043 phospho-2-dehydro-3-deoxyheptonate aldolase YP_051441.1 3768751 R 218491 CDS YP_051442.1 50122275 2883758 3770090..3770806 1 NC_004547.2 unknown function; when overproduced it confers drug-resistance; two-component response-regulatory protein YehT 3770806 2883758 ECA3353 Pectobacterium atrosepticum SCRI1043 two-component response-regulatory protein YehT YP_051442.1 3770090 D 218491 CDS YP_051443.1 50122276 2883759 3770828..3771202 1 NC_004547.2 Similar to Shigella flexneri orf, conserved hypothetical protein yfil or sf2662 SWALL:AAN44158 (EMBL:AE015282) (127 aa) fasta scores: E(): 2.5e-11, 38.33% id in 120 aa, and to Escherichia coli hypothetical protein yfil yfil or b2602 SWALL:YFIL_ECOLI (SWALL:P11289) (134 aa) fasta scores: E(): 2.6e-11, 38.33% id in 120 aa; hypothetical protein 3771202 2883759 ECA3354 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051443.1 3770828 D 218491 CDS YP_051444.1 50122277 2883760 3771461..3772399 1 NC_004547.2 Similar to Ralstonia solanacearum hypothetical protein rsc2286 or rs01270 SWALL:Q8XX32 (EMBL:AL646069) (317 aa) fasta scores: E(): 4e-55, 49.83% id in 311 aa, and to Xanthomonas campestris hypothetical protein Xcc1543 SWALL:Q8PAE2 (EMBL:AE012255) (319 aa) fasta scores: E(): 2.2e-50, 47.84% id in 301 aa; hypothetical protein 3772399 2883760 ECA3355 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051444.1 3771461 D 218491 CDS YP_051445.1 50122278 2883619 complement(3772662..3773009) 1 NC_004547.2 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 3773009 rplS 2883619 rplS Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L19 YP_051445.1 3772662 R 218491 CDS YP_051446.1 50122279 2884244 complement(3773072..3773827) 1 NC_004547.2 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 3773827 trmD 2884244 trmD Pectobacterium atrosepticum SCRI1043 tRNA (guanine-N(1)-)-methyltransferase YP_051446.1 3773072 R 218491 CDS YP_051447.1 50122280 2884717 complement(3773866..3774414) 1 NC_004547.2 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 3774414 rimM 2884717 rimM Pectobacterium atrosepticum SCRI1043 16S rRNA-processing protein RimM YP_051447.1 3773866 R 218491 CDS YP_051448.1 50122281 2884467 complement(3774433..3774681) 1 NC_004547.2 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 3774681 rpsP 2884467 rpsP Pectobacterium atrosepticum SCRI1043 30S ribosomal protein S16 YP_051448.1 3774433 R 218491 CDS YP_051449.1 50122282 2882285 complement(3774839..3776200) 1 NC_004547.2 with 4.5S RNA forms a signal recognition particle involved in targeting and integration of inner membrane proteins; signal recognition particle protein 3776200 ffh 2882285 ffh Pectobacterium atrosepticum SCRI1043 signal recognition particle protein YP_051449.1 3774839 R 218491 CDS YP_051450.1 50122283 2883761 3776370..3777164 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo3297 or y0891 SWALL:Q8ZBU5 (EMBL:AJ414156) (297 aa) fasta scores: E(): 4.5e-81, 75.57% id in 262 aa, and to Salmonella typhimurium CorE SWALL:Q9X619 (EMBL:AF130857) (288 aa) fasta scores: E(): 3.6e-78, 72.72% id in 264 aa; hypothetical protein 3777164 2883761 ECA3361 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051450.1 3776370 D 218491 CDS YP_051451.1 50122284 2882262 complement(3777271..3777786) 1 NC_004547.2 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 3777786 luxS 2882262 luxS Pectobacterium atrosepticum SCRI1043 S-ribosylhomocysteinase YP_051451.1 3777271 R 218491 CDS YP_051452.1 50122285 2883840 complement(3777940..3779493) 1 NC_004547.2 involved in the first step of glutathione biosynthesis; glutamate--cysteine ligase 3779493 gshA 2883840 gshA Pectobacterium atrosepticum SCRI1043 glutamate--cysteine ligase YP_051452.1 3777940 R 218491 CDS YP_051453.1 50122286 2883073 complement(3779576..3780004) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo3302 or y0886 SWALL:Q8ZBU1 (EMBL:AJ414156) (142 aa) fasta scores: E(): 4.6e-36, 69.5% id in 141 aa, and to Salmonella typhimurium, and Salmonella typhi inner membrane protein yqaa or stm2819 or sty2945 SWALL:Q8XGM5 (EMBL:AE008828) (141 aa) fasta scores: E(): 2.6e-31, 55.31% id in 141 aa; hypothetical protein 3780004 2883073 ECA3364 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051453.1 3779576 R 218491 CDS YP_051454.1 50122287 2883074 complement(3780001..3780567) 1 NC_004547.2 YqaB; catalyzes the dephosphorylation of fructose 1-phosphate, 6-phosphogluconate and p-nitrophenyl phosphate (pNPP); presents beta-phosphoglucomutase activity at a lower extent; fructose-1-phosphatase 3780567 2883074 ECA3365 Pectobacterium atrosepticum SCRI1043 fructose-1-phosphatase YP_051454.1 3780001 R 218491 CDS YP_051455.1 50122288 2883773 complement(3781840..3782025) 1 NC_004547.2 affects carbohydrate metabolism; has regulatory role in many processes; carbon storage regulator 3782025 csrA 2883773 csrA Pectobacterium atrosepticum SCRI1043 carbon storage regulator YP_051455.1 3781840 R 218491 CDS YP_051456.1 50122289 2882965 complement(3782345..3784972) 1 NC_004547.2 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 3784972 alaS 2882965 alaS Pectobacterium atrosepticum SCRI1043 alanyl-tRNA synthetase YP_051456.1 3782345 R 218491 CDS YP_051457.1 50122290 2885277 complement(3785110..3785598) 1 NC_004547.2 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; recombination regulator RecX 3785598 recX 2885277 recX Pectobacterium atrosepticum SCRI1043 recombination regulator RecX YP_051457.1 3785110 R 218491 CDS YP_051458.1 50122291 2885057 complement(3785644..3786717) 1 NC_004547.2 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 3786717 recA 2885057 recA Pectobacterium atrosepticum SCRI1043 recombinase A YP_051458.1 3785644 R 218491 CDS YP_051459.1 50122292 2883075 complement(3786825..3787319) 1 NC_004547.2 Similar to Yersinia pestis competence-damaged protein ypo3308 SWALL:Q8ZBT7 (EMBL:AJ414156) (162 aa) fasta scores: E(): 4.4e-38, 65.43% id in 162 aa, and to Salmonella typhi hypothetical protein Sty2951 SWALL:Q8Z4D3 (EMBL:AL627276) (165 aa) fasta scores: E(): 3.6e-37, 63.8% id in 163 aa; competence damage-inducible protein A 3787319 2883075 ECA3370 Pectobacterium atrosepticum SCRI1043 competence damage-inducible protein A YP_051459.1 3786825 R 218491 CDS YP_051460.1 50122293 2882483 complement(3787555..3787890) 1 NC_004547.2 Similar to Pasteurella multocida hypothetical protein Pm0253 SWALL:Q9CP15 (EMBL:AE006059) (117 aa) fasta scores: E(): 1e-27, 55.85% id in 111 aa; hypothetical protein 3787890 2882483 ECA3371 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051460.1 3787555 R 218491 CDS YP_051461.1 50122294 2882484 3788371..3788859 1 NC_004547.2 Similar to Anabaena sp. hypothetical protein All2381 SWALL:Q8YUG5 (EMBL:AP003589) (151 aa) fasta scores: E(): 7e-05, 27.46% id in 142 aa, and to Streptomyces lincolnensis hypothetical 17.2 kDa protein in melc2-rnhh intergenic region SWALL:YMEL_STRLN (SWALL:P55049) (150 aa) fasta scores: E(): 0.00028, 25.87% id in 143 aa; hypothetical protein 3788859 2882484 ECA3372 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051461.1 3788371 D 218491 CDS YP_051462.1 50122295 2881426 3788942..3789616 1 NC_004547.2 protein involved in resistance to different drugs (tetracycline, chloramphenicol, beta-lactams, and quinolones); part of the multiple antibiotic resistance (mar) locus, which is composed by the genes marC and marRAB; unknown function; multiple drug resistance protein MarC 3789616 marC 2881426 marC Pectobacterium atrosepticum SCRI1043 multiple drug resistance protein MarC YP_051462.1 3788942 D 218491 CDS YP_051463.1 50122296 2882485 3789808..3791406 1 NC_004547.2 Similar to Ralstonia solanacearum probable transmembrane protein rsc1893 or rs03455 SWALL:Q8XY70 (EMBL:AL646067) (533 aa) fasta scores: E(): 6.6e-66, 37.96% id in 511 aa, and to Pseudomonas putida ggdef family protein pp2413 SWALL:AAN68025 (EMBL:AE016783) (544 aa) fasta scores: E(): 3.3e-73, 41.66% id in 516 aa; signaling membrane protein 3791406 2882485 ECA3374 Pectobacterium atrosepticum SCRI1043 signaling membrane protein YP_051463.1 3789808 D 218491 CDS YP_051464.1 50122297 2883343 complement(3791666..3792868) 1 NC_004547.2 Similar to Xanthomonas campestris mfs transporter xcc0495 SWALL:Q8PD50 (EMBL:AE012146) (396 aa) fasta scores: E(): 1.9e-46, 42.6% id in 392 aa, and to Clostridium acetobutylicum predicted permease cac3482 SWALL:Q97DJ5 (EMBL:AE007845) (394 aa) fasta scores: E(): 6.2e-46, 42.54% id in 362 aa; transporter 3792868 2883343 ECA3375 Pectobacterium atrosepticum SCRI1043 transporter YP_051464.1 3791666 R 218491 CDS YP_051465.1 50122298 2883344 complement(3792984..3793865) 1 NC_004547.2 Similar to Rhizobium loti transcription regulator mll3011 SWALL:Q98H66 (EMBL:AP003001) (292 aa) fasta scores: E(): 2.1e-49, 48.61% id in 288 aa, and to Pseudomonas putida transcriptional regulator, LysR family pp3811 SWALL:Q88GB3 (EMBL:AE016788) (294 aa) fasta scores: E(): 1e-34, 41.15% id in 294 aa; LysR family transcriptional regulator 3793865 2883344 ECA3376 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_051465.1 3792984 R 218491 CDS YP_051466.1 50122299 2883345 3794082..3794717 1 NC_004547.2 cofactor involved in the reduction of disulfides; glutaredoxin 3794717 2883345 ECA3377 Pectobacterium atrosepticum SCRI1043 glutaredoxin YP_051466.1 3794082 D 218491 CDS YP_051467.1 50122300 2883346 complement(3794816..3795238) 1 NC_004547.2 Similar to Yersinia pestis pesticin immunity protein Pim or yppcp1.04 SWALL:Q57285 (EMBL:Z54145) (141 aa) fasta scores: E(): 0.0013, 30.76% id in 143 aa; bacteriocin immunity protein 3795238 2883346 ECA3378 Pectobacterium atrosepticum SCRI1043 bacteriocin immunity protein YP_051467.1 3794816 R 218491 CDS YP_051468.1 50122301 2882520 complement(3795370..3796710) 1 NC_004547.2 Similar to Nocardia aerocolonigenes glycosyltransferase RbmA or Ngt SWALL:BAC15749 (EMBL:AF534707) (421 aa) fasta scores: E(): 9.7e-34, 31.88% id in 414 aa, and to Streptomyces sp. TP-A0274 N-glycosyltransferase staG SWALL:BAC55209 (EMBL:AB088119) (446 aa) fasta scores: E(): 6.3e-32, 30.76% id in 416 aa; glycosyltransferase 3796710 2882520 ECA3379 Pectobacterium atrosepticum SCRI1043 glycosyltransferase YP_051468.1 3795370 R 218491 CDS YP_051469.1 50122302 2882671 complement(3796722..3797654) 1 NC_004547.2 Similar to Pseudomonas aeruginosa pyoverdine biosynthesis protein PvcB SWALL:O30371 (EMBL:AF002222) (291 aa) fasta scores: E(): 7.7e-50, 49.43% id in 263 aa, and to Vibrio cholerae PvcB protein vc1944 SWALL:Q9KQQ4 (EMBL:AE004270) (287 aa) fasta scores: E(): 7.2e-47, 45.09% id in 275 aa; pyoverdine biosynthesis protein 3797654 pvcB 2882671 pvcB Pectobacterium atrosepticum SCRI1043 pyoverdine biosynthesis protein YP_051469.1 3796722 R 218491 CDS YP_051470.1 50122303 2882676 complement(3797644..3798624) 1 NC_004547.2 Similar to Pseudomonas aeruginosa pyoverdine biosynthesis protein PvcA SWALL:O30370 (EMBL:AF002222) (327 aa) fasta scores: E(): 2.3e-70, 61.38% id in 303 aa, and to Vibrio cholerae PvcA protein vc1949 SWALL:Q9KQP9 (EMBL:AE004270) (608 aa) fasta scores: E(): 2.1e-13, 28.52% id in 284 aa; pyoverdine biosynthesis protein 3798624 pvcA 2882676 pvcA Pectobacterium atrosepticum SCRI1043 pyoverdine biosynthesis protein YP_051470.1 3797644 R 218491 CDS YP_051471.1 50122304 2882521 complement(3798621..>3798818) 1 NC_004547.2 Similar to Escherichia coli colicin k immunity protein Cki or CfI SWALL:IMMK_ECOLI (SWALL:Q47503) (96 aa) fasta scores: E(): 1.8, 36.06% id in 61 aa, and to Campylobacter jejuni hypothetical 8.5 kDa protein SWALL:O07090 (EMBL:Y13641) (73 aa) fasta scores: E(): 0.26, 30.61% id in 49 aa; bacteriocin immunity protein >3798818 2882521 ECA3381A Pectobacterium atrosepticum SCRI1043 bacteriocin immunity protein YP_051471.1 3798621 R 218491 CDS YP_051472.1 50122305 2882522 complement(3799229..3799516) 1 NC_004547.2 hypothetical protein 3799516 2882522 ECA3382 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051472.1 3799229 R 218491 CDS YP_051473.1 50122306 2882897 complement(3799504..3799749) 1 NC_004547.2 hypothetical protein 3799749 2882897 ECA3382A Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051473.1 3799504 R 218491 CDS YP_051474.1 50122307 2882898 complement(3799873..3800157) 1 NC_004547.2 Similar to Ralstonia solanacearum hypothetical protein rsp1543 or rs02099 SWALL:Q8XPU3 (EMBL:AL646085) (104 aa) fasta scores: E(): 0.013, 32.97% id in 94 aa, and to Neisseria meningitidis hypothetical protein Nmb0654 SWALL:Q9K0F3 (EMBL:AE002420) (105 aa) fasta scores: E(): 4.3, 23.25% id in 86 aa; hypothetical protein 3800157 2882898 ECA3383 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051474.1 3799873 R 218491 CDS YP_051475.1 50122308 2882899 complement(3800170..3800646) 1 NC_004547.2 hypothetical protein 3800646 2882899 ECA3384 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051475.1 3800170 R 218491 CDS YP_051476.1 50122309 2882900 complement(3800657..3800947) 1 NC_004547.2 hypothetical protein 3800947 2882900 ECA3385 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051476.1 3800657 R 218491 CDS YP_051477.1 50122310 2882829 complement(3801262..3801546) 1 NC_004547.2 hypothetical protein 3801546 2882829 ECA3386 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051477.1 3801262 R 218491 CDS YP_051478.1 50122311 2882830 complement(3801551..3801913) 1 NC_004547.2 Similar to Neisseria meningitidis hypothetical protein Nma1078 SWALL:Q9JUY9 (EMBL:AL162755) (122 aa) fasta scores: E(): 5.7e-08, 49.27% id in 69 aa; hypothetical protein 3801913 2882830 ECA3387 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051478.1 3801551 R 218491 CDS YP_051479.1 50122312 2882831 complement(3802185..3802739) 1 NC_004547.2 hypothetical protein 3802739 2882831 ECA3388 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051479.1 3802185 R 218491 CDS YP_051480.1 50122313 2881819 complement(3802908..3803930) 1 NC_004547.2 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 3803930 xerC 2881819 xerC Pectobacterium atrosepticum SCRI1043 site-specific tyrosine recombinase XerC YP_051480.1 3802908 R 218491 CDS YP_051481.1 50122314 2881820 complement(3803975..3806881) 1 NC_004547.2 Similar to Photorhabdus luminescens DnaG primase-like dnaG SWALL:AAN64202 (EMBL:AY144117) (925 aa) fasta scores: E(): 2.5e-133, 71.76% id in 928 aa, and to the N-terminal region of Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri DNA primase dnag or dnap or parb or b3066 or z4419 or ecs3949 or sf3107 SWALL:PRIM_ECOLI (SWALL:P02923) (581 aa) fasta scores: E(): 2.7e-13, 29.1% id in 378 aa. Also similar to ECA3400, (82.939% id), ECA3407 (85.082% id), ECA3416 (85.082% id), ECA4282 (80.041% id), and to ECA4291 (80.041% id).; DnaG primase-like protein 3806881 2881820 ECA3390 Pectobacterium atrosepticum SCRI1043 DnaG primase-like protein YP_051481.1 3803975 R 218491 CDS YP_051482.1 50122315 2881821 3806995..3807396 1 NC_004547.2 Similar to Escherichia coli O157:H7 similar to DicA, regulator of dicB, encoded within cryptic prophage cp-933m z1333 or ecs1069 SWALL:Q8XD66 (EMBL:AE005287) (132 aa) fasta scores: E(): 0.00065, 33.66% id in 101 aa; prophage regulatory ptotein 3807396 2881821 ECA3391 Pectobacterium atrosepticum SCRI1043 prophage regulatory ptotein YP_051482.1 3806995 D 218491 CDS YP_051483.1 50122316 2882398 3807474..3807803 1 NC_004547.2 Similar to Photorhabdus luminescens Orf8 SWALL:AAN64200 (EMBL:AY144117) (106 aa) fasta scores: E(): 1e-07, 38.63% id in 88 aa, and to Salmonella typhimurium cytoplasmic protein stm0296 SWALL:Q8ZRK7 (EMBL:AE008708) (82 aa) fasta scores: E(): 2.2e-07, 38.46% id in 65 aa; hypothetical protein 3807803 2882398 ECA3392 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051483.1 3807474 D 218491 CDS YP_051484.1 50122317 2882399 3807800..3808144 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3611 or y0263 SWALL:AAM83857 (EMBL:AJ414158) (63 aa) fasta scores: E(): 1.5e-06, 59.09% id in 44 aa; hypothetical protein 3808144 2882399 ECA3393 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051484.1 3807800 D 218491 CDS YP_051485.1 50122318 2882400 complement(3808191..3808556) 1 NC_004547.2 hypothetical protein 3808556 2882400 ECA3394 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051485.1 3808191 R 218491 CDS YP_051486.1 50122319 2882401 complement(3808556..3808972) 1 NC_004547.2 hypothetical protein 3808972 2882401 ECA3395 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051486.1 3808556 R 218491 CDS YP_051487.1 50122320 2881887 complement(3809054..3809221) 1 NC_004547.2 hypothetical protein 3809221 2881887 ECA3396 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051487.1 3809054 R 218491 CDS YP_051488.1 50122321 2881888 complement(3809337..3809699) 1 NC_004547.2 hypothetical protein 3809699 2881888 ECA3397 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051488.1 3809337 R 218491 CDS YP_051489.1 50122322 2881889 complement(3809692..3809835) 1 NC_004547.2 hypothetical protein 3809835 2881889 ECA3398 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051489.1 3809692 R 218491 CDS YP_051490.1 50122323 2885403 complement(3809930..3810988) 1 NC_004547.2 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 3810988 xerC 2885403 xerC Pectobacterium atrosepticum SCRI1043 site-specific tyrosine recombinase XerC YP_051490.1 3809930 R 218491 CDS YP_051491.1 50122324 2885404 complement(3811018..3813909) 1 NC_004547.2 Similar to Photorhabdus luminescens DnaG primase-like DnaG SWALL:AAN64202 (EMBL:AY144117) (925 aa) fasta scores: E(): 5.1e-145, 74.15% id in 921 aa, and to the C-terminal region of Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri DNA primase DnaG or DnaP or ParB or b3066 or z4419 or ecs3949 or sf3107 SWALL:PRIM_ECOLI (SWALL:P02923) (581 aa) fasta scores: E(): 9.7e-14, 29.11% id in 395 aa. Also similar to ECA3390, (82.939% id), ECA3407 (86.812% id), ECA3416 (86.812% id), ECA4282 (84.394% id), and to ECA4291 (84.394% id).; DnaG primase-like protein 3813909 2885404 ECA3400 Pectobacterium atrosepticum SCRI1043 DnaG primase-like protein YP_051491.1 3811018 R 218491 CDS YP_051492.1 50122325 2885405 3814023..3814433 1 NC_004547.2 Similar to Photorhabdus luminescens Orf9 SWALL:AAN64201 (EMBL:AY144117) (130 aa) fasta scores: E(): 0.00051, 27.02% id in 111 aa, and to Bacteriophage A118 repressor protein SWALL:Q9T188 (EMBL:AJ242593) (101 aa) fasta scores: E(): 0.012, 36.5% id in 63 aa; phage regulatory protein 3814433 2885405 ECA3401 Pectobacterium atrosepticum SCRI1043 phage regulatory protein YP_051492.1 3814023 D 218491 CDS YP_051493.1 50122326 2885406 3814512..3814736 1 NC_004547.2 Similar to Yersinia pestis hypothetical y0261 SWALL:Q8CLT6 (EMBL:AE013626) (74 aa) fasta scores: E(): 2.4e-17, 63.51% id in 74 aa, and to Photorhabdus luminescens Orf8 SWALL:Q8GDM5 (EMBL:AY144117) (106 aa) fasta scores: E(): 4.7e-10, 53.62% id in 69 aa; hypothetical protein 3814736 2885406 ECA3402 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051493.1 3814512 D 218491 CDS YP_051494.1 50122327 2884875 complement(3814802..3815131) 1 NC_004547.2 hypothetical protein 3815131 2884875 ECA3403 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051494.1 3814802 R 218491 CDS YP_051495.1 50122328 2884876 complement(3815128..3815565) 1 NC_004547.2 hypothetical protein 3815565 2884876 ECA3404 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051495.1 3815128 R 218491 CDS YP_051496.1 50122329 2884877 complement(3815850..3816350) 1 NC_004547.2 hypothetical protein 3816350 2884877 ECA3405 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051496.1 3815850 R 218491 CDS YP_051497.1 50122330 2882612 complement(3816588..3817622) 1 NC_004547.2 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 3817622 xerC 2882612 xerC Pectobacterium atrosepticum SCRI1043 site-specific tyrosine recombinase XerC YP_051497.1 3816588 R 218491 CDS YP_051498.1 50122331 2882613 complement(3817656..3820535) 1 NC_004547.2 Similar to Photorhabdus luminescens DnaG primase-like DnaG SWALL:AAN64202 (EMBL:AY144117) (925 aa) fasta scores: E(): 2.1e-145, 73.72% id in 921 aa, and to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri DNA primase DnaG or DnaP or ParB or b3066 or z4419 or ecs3949 or sf3107 SWALL:PRIM_ECOLI (SWALL:P02923) (581 aa) fasta scores: E(): 1.2e-13, 27.89% id in 423 aa. Also similar to ECA3390, (85.082% id), ECA3400 (86.812% id), ECA3416 (100.000% id), ECA4282 (87.010% id), and to ECA4291 (87.010% id).; DnaG primase-like protein 3820535 2882613 ECA3407 Pectobacterium atrosepticum SCRI1043 DnaG primase-like protein YP_051498.1 3817656 R 218491 CDS YP_051499.1 50122332 2882614 3820648..3821043 1 NC_004547.2 Similar to Vibrio phage CTX RstR SWALL:Q8LTJ3 (EMBL:AF511000) (112 aa) fasta scores: E(): 0.024, 32% id in 100 aa, and to Stigmatella aurantiaca transcriptional repressor SWALL:Q93TW4 (EMBL:AF319998) (119 aa) fasta scores: E(): 0.001, 30.35% id in 112 aa; phage regulatory protein 3821043 2882614 ECA3408 Pectobacterium atrosepticum SCRI1043 phage regulatory protein YP_051499.1 3820648 D 218491 CDS YP_051500.1 50122333 2883792 3821115..3821444 1 NC_004547.2 Similar to Photorhabdus luminescens Orf8 SWALL:AAN64200 (EMBL:AY144117) (106 aa) fasta scores: E(): 2.9e-08, 39.77% id in 88 aa, and to Salmonella typhimurium cytoplasmic protein stm0296 SWALL:Q8ZRK7 (EMBL:AE008708) (82 aa) fasta scores: E(): 1.7e-08, 40% id in 65 aa; hypothetical protein 3821444 2883792 ECA3409 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051500.1 3821115 D 218491 CDS YP_051501.1 50122334 2883793 3821441..3821785 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3611 or y0263 SWALL:Q8ZB18 (EMBL:AJ414158) (63 aa) fasta scores: E(): 2e-05, 54.54% id in 44 aa; hypothetical protein 3821785 2883793 ECA3410 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051501.1 3821441 D 218491 CDS YP_051502.1 50122335 2883794 complement(3821846..3822094) 1 NC_004547.2 Similar to Clostridium acetobutylicum hypothetical protein Cac2031 SWALL:Q97HI0 (EMBL:AE007706) (80 aa) fasta scores: E(): 8.4e-10, 49.25% id in 67 aa; hypothetical protein 3822094 2883794 ECA3411 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051502.1 3821846 R 218491 CDS YP_051503.1 50122336 2883795 complement(3822091..3822462) 1 NC_004547.2 hypothetical protein 3822462 2883795 ECA3412 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051503.1 3822091 R 218491 CDS YP_051504.1 50122337 2883181 3822480..3822674 1 NC_004547.2 hypothetical protein 3822674 2883181 ECA3413 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051504.1 3822480 D 218491 CDS YP_051505.1 50122338 2883182 complement(3822780..3823280) 1 NC_004547.2 hypothetical protein 3823280 2883182 ECA3414 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051505.1 3822780 R 218491 CDS YP_051506.1 50122339 2883183 complement(3823518..3824552) 1 NC_004547.2 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 3824552 xerC 2883183 xerC Pectobacterium atrosepticum SCRI1043 site-specific tyrosine recombinase XerC YP_051506.1 3823518 R 218491 CDS YP_051507.1 50122340 2882801 complement(3824586..3827465) 1 NC_004547.2 Similar to Photorhabdus luminescens DnaG primase-like dnaG SWALL:AAN64202 (EMBL:AY144117) (925 aa) fasta scores: E(): 2e-145, 73.72% id in 921 aa, and to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri DNA primase DnaG or DnaP or ParB or b3066 or z4419 or ecs3949 or sf3107 SWALL:PRIM_ECOLI (SWALL:P02923) (581 aa) fasta scores: E(): 1.2e-13, 27.89% id in 423 aa. Also similar to ECA3390, (85.082% id), ECA3400 (86.812% id), ECA3407 (100.000% id), ECA4282 (87.010% id), and to ECA4291 (87.010% id).; DnaG primase-like protein 3827465 2882801 ECA3416 Pectobacterium atrosepticum SCRI1043 DnaG primase-like protein YP_051507.1 3824586 R 218491 CDS YP_051508.1 50122341 2882802 3827578..3827973 1 NC_004547.2 Similar to Vibrio phage CTX RstR SWALL:Q8LTJ3 (EMBL:AF511000) (112 aa) fasta scores: E(): 0.024, 32% id in 100 aa, and to Stigmatella aurantiaca transcriptional repressor SWALL:Q93TW4 (EMBL:AF319998) (119 aa) fasta scores: E(): 0.001, 30.35% id in 112 aa; phage regulatory protein 3827973 2882802 ECA3417 Pectobacterium atrosepticum SCRI1043 phage regulatory protein YP_051508.1 3827578 D 218491 CDS YP_051509.1 50122342 2882803 3828045..3828374 1 NC_004547.2 Similar to Photorhabdus luminescens Orf8 SWALL:AAN64200 (EMBL:AY144117) (106 aa) fasta scores: E(): 2.9e-08, 39.77% id in 88 aa, and to Salmonella typhimurium cytoplasmic protein stm0296 SWALL:Q8ZRK7 (EMBL:AE008708) (82 aa) fasta scores: E(): 1.7e-08, 40% id in 65 aa; hypothetical protein 3828374 2882803 ECA3418 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051509.1 3828045 D 218491 CDS YP_051510.1 50122343 2882804 3828371..3828715 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3611 or y0263 SWALL:Q8ZB18 (EMBL:AJ414158) (63 aa) fasta scores: E(): 6.4e-05, 50% id in 44 aa; hypothetical protein 3828715 2882804 ECA3419 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051510.1 3828371 D 218491 CDS YP_051511.1 50122344 2885382 complement(3828784..3829221) 1 NC_004547.2 Similar to Pediococcus damnosus hsp60 SWALL:Q8KWK2 (EMBL:AF405397) (184 aa) fasta scores: E(): 4.1, 24.65% id in 146 aa; hypothetical protein 3829221 2885382 ECA3420 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051511.1 3828784 R 218491 CDS YP_051512.1 50122345 2885383 complement(3829218..3834074) 1 NC_004547.2 Similar to Photorhabdus luminescens Rhs-corE SWALL:AAN64198 (EMBL:AY144117) (1469 aa) fasta scores: E(): 2.3e-61, 28.84% id in 1286 aa, and to Escherichia coli RhsB protein precursor RhsB or b3482 SWALL:RHSB_ECOLI (SWALL:P16917) (1411 aa) fasta scores: E(): 2e-25, 24.98% id in 1401 aa; Rhs protein 3834074 2885383 ECA3421 Pectobacterium atrosepticum SCRI1043 Rhs protein YP_051512.1 3829218 R 218491 CDS YP_051513.1 50122346 2885384 complement(3834095..3835012) 1 NC_004547.2 Similar to Vibrio cholerae hypothetical protein Vca0019 SWALL:Q9KNE6 (EMBL:AE004345) (295 aa) fasta scores: E(): 0.32, 20.54% id in 219 aa, and to Agrobacterium tumefaciens hypothetical protein atu4349 or agr_l_1031 SWALL:Q8U7V0 (EMBL:AE009363) (320 aa) fasta scores: E(): 0.34, 21.94% id in 319 aa; hypothetical protein 3835012 2885384 ECA3422 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051513.1 3834095 R 218491 CDS YP_051514.1 50122347 2881407 complement(3835009..3835965) 1 NC_004547.2 hypothetical protein 3835965 2881407 ECA3423 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051514.1 3835009 R 218491 CDS YP_051515.1 50122348 2881408 complement(3836134..3836901) 1 NC_004547.2 Similar to Xanthomonas campestris ankyrin-like protein xcc4050 SWALL:Q8P3M1 (EMBL:AE012526) (325 aa) fasta scores: E(): 3.9e-08, 31.22% id in 253 aa, and to Serratia sp. MK1 accessory protein plaS SWALL:Q9X9D9 (EMBL:U37262) (251 aa) fasta scores: E(): 1.5e-07, 26.66% id in 210 aa. Also similar to ECA3425 (83.784% identity in 259 aa overlap).; lipoprotein 3836901 2881408 ECA3424 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_051515.1 3836134 R 218491 CDS YP_051516.1 50122349 2881409 complement(3836898..3837677) 1 NC_004547.2 Similar to Xanthomonas campestris ankyrin-like protein xcc4050 SWALL:Q8P3M1 (EMBL:AE012526) (325 aa) fasta scores: E(): 2.1e-08, 30.68% id in 264 aa, and to Serratia sp. MK1 accessory protein plaS SWALL:Q9X9D9 (EMBL:U37262) (251 aa) fasta scores: E(): 5.5e-07, 25.31% id in 237 aa. Also similar to ECA3424 (83.784% identity in 259 aa overlap); lipoprotein 3837677 2881409 ECA3425 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_051516.1 3836898 R 218491 CDS YP_051517.1 50122350 2884083 complement(3837677..3839050) 1 NC_004547.2 Similar to Serratia liquefaciens extracellular phospholipase A1 precursor PhlA SWALL:PA1_SERLI (SWALL:P18952) (319 aa) fasta scores: E(): 4.2e-06, 30.09% id in 216 aa, and to Xanthomonas campestris phospholipase A1 xcc2722 SWALL:Q8P791 (EMBL:AE012385) (398 aa) fasta scores: E(): 3e-09, 33.82% id in 204 aa; phospholipase 3839050 2884083 ECA3426 Pectobacterium atrosepticum SCRI1043 phospholipase YP_051517.1 3837677 R 218491 CDS YP_051518.1 50122351 2884084 complement(3839060..3841096) 1 NC_004547.2 Similar to Yersinia pestis VgrG-like protein y0257 SWALL:AAM83851 (EMBL:AE013625) (700 aa) fasta scores: E(): 7e-108, 52.01% id in 521 aa, and to Vibrio cholerae VgrG protein vca0018 SWALL:Q9KNE7 (EMBL:AE004345) (694 aa) fasta scores: E(): 7.6e-107, 47.05% id in 680 aa; hypothetical protein 3841096 2884084 ECA3427 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051518.1 3839060 R 218491 CDS YP_051519.1 50122352 2884085 complement(3841279..3841797) 1 NC_004547.2 Similar to Vibrio cholerae hcp=28 kDa secreted hydrophilic protein (HcpA or vca0017) and (Hcp or vc1415) SWALL:P72350 (EMBL:S81006) (172 aa) fasta scores: E(): 9.6e-56, 78.48% id in 172 aa, and to Yersinia pestis hypothetical protein ypo3708 ypo3708 or y0036 SWALL:AAM83631 (EMBL:AJ414158) (172 aa) fasta scores: E(): 4.8e-59, 80.81% id in 172 aa. The Yersinia pestis orthologue of this gene is described as a hemolysin co-regulated protein. Also similar to ECA4275 (99.419% identity in 172aa overlap) and ECA2866 (95.349% identity in 172aa overlap).; hypothetical protein 3841797 2884085 ECA3428 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051519.1 3841279 R 218491 CDS YP_051520.1 50122353 2884086 complement(3842363..3843718) 1 NC_004547.2 Similar to Escherichia coli hypothetical protein ybeq or b0644 SWALL:YBEQ_ECOLI (SWALL:P77234) (325 aa) fasta scores: E(): 2.1e-09, 28.19% id in 344 aa, and to Shigella flexneri orf, conserved hypothetical protein ybeq or sf0637 SWALL:AAN42273 (EMBL:AE015095) (327 aa) fasta scores: E(): 2.4e-09, 29.58% id in 311 aa; lipoprotein 3843718 2884086 ECA3430 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_051520.1 3842363 R 218491 CDS YP_051521.1 50122354 2882441 complement(3843747..3845183) 1 NC_004547.2 Similar to Photorhabdus luminescens Orf3 SWALL:AAN64195 (EMBL:AY144117) (447 aa) fasta scores: E(): 4e-30, 33.47% id in 469 aa, and to Escherichia coli O157:H7 hypothetical protein z0249 z0249 or ecs0217 SWALL:Q8X7X1 (EMBL:AE005197) (499 aa) fasta scores: E(): 2e-25, 30.42% id in 470 aa; hypothetical protein 3845183 2882441 ECA3431 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051521.1 3843747 R 218491 CDS YP_051522.1 50122355 2882442 complement(3845233..3848730) 1 NC_004547.2 Similar to Rhizobium leguminosarum ImpL SWALL:Q93EC2 (EMBL:AF361470) (1158 aa) fasta scores: E(): 1.3e-19, 25.08% id in 1200 aa, and to Escherichia coli O157:H7 macrophage toxin z0250 or ecs0218 SWALL:Q8X7W9 (EMBL:AE005197) (1144 aa) fasta scores: E(): 7.8e-112, 44.66% id in 1153 aa, and to Photorhabdus luminescens Pmt1 SWALL:AAN64194 (EMBL:AY144117) (1181 aa) fasta scores: E(): 1.3e-127, 44.42% id in 1184 aa, and to Legionella pneumophila IcmF protein IcmF SWALL:O54529 (EMBL:Y15044) (973 aa) fasta scores: E(): 7.8e-16, 20.74% id in 969 aa; virulence-associated protein 3848730 2882442 ECA3432 Pectobacterium atrosepticum SCRI1043 virulence-associated protein YP_051522.1 3845233 R 218491 CDS YP_051523.1 50122356 2882443 complement(3848755..3850173) 1 NC_004547.2 Similar to Photorhabdus luminescens Orf1 SWALL:AAN64193 (EMBL:AY144117) (334 aa) fasta scores: E(): 1e-39, 39.56% id in 321 aa, and to Vibrio cholerae hypothetical protein Vca0119 SWALL:Q9KN46 (EMBL:AE004353) (469 aa) fasta scores: E(): 2.8e-42, 34.05% id in 464 aa; hypothetical protein 3850173 2882443 ECA3433 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051523.1 3848755 R 218491 CDS YP_051524.1 50122357 2882423 complement(3850185..3850745) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo3601 SWALL:Q8ZB28 (EMBL:AJ414157) (228 aa) fasta scores: E(): 4.8e-09, 31.88% id in 207 aa, and to Pseudomonas putida conserved hypothetical protein pp4073 SWALL:AAN69663 (EMBL:AE016789) (210 aa) fasta scores: E(): 2.2e-05, 35.23% id in 105 aa; hypothetical protein 3850745 2882423 ECA3434 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051524.1 3850185 R 218491 CDS YP_051525.1 50122358 2882424 complement(3850745..3852298) 1 NC_004547.2 Similar to Vibrio cholerae sigma-54 dependent transcriptional regulator vca0117 SWALL:Q9KN48 (EMBL:AE004353) (530 aa) fasta scores: E(): 9.9e-52, 40.46% id in 519 aa, and to Escherichia coli hypothetical sigma-54-dependent transcriptional regulator ygev or b2869 SWALL:YGEV_ECOLI (SWALL:Q46802) (592 aa) fasta scores: E(): 1.8e-39, 35.61% id in 438 aa; sigma-54 dependent transcriptional regulator 3852298 2882424 ECA3435 Pectobacterium atrosepticum SCRI1043 sigma-54 dependent transcriptional regulator YP_051525.1 3850745 R 218491 CDS YP_051526.1 50122359 2882425 complement(3852301..3854898) 1 NC_004547.2 Similar to Thermus thermophilus ClpB protein ClpB SWALL:CLPB_THETH (SWALL:Q9RA63) (854 aa) fasta scores: E(): 7e-69, 37.97% id in 869 aa, and to Yersinia pestis clp ATPase ClpB2 or ypo3599 or ClpB or y0275 SWALL:Q8ZB30 (EMBL:AJ414157) (867 aa) fasta scores: E(): 6.3e-209, 68.66% id in 868 aa; chaperone 3854898 2882425 ECA3436 Pectobacterium atrosepticum SCRI1043 chaperone YP_051526.1 3852301 R 218491 CDS YP_051527.1 50122360 2882426 complement(3854912..3855688) 1 NC_004547.2 Similar to Rhizobium leguminosarum ImpK SWALL:Q93EC3 (EMBL:AF361470) (510 aa) fasta scores: E(): 3.4e-16, 27.58% id in 232 aa, and to Yersinia pestis membrane protein ypo3598 or y0276 SWALL:AAM83868 (EMBL:AJ414157) (255 aa) fasta scores: E(): 4e-46, 46.45% id in 254 aa; hypothetical protein 3855688 2882426 ECA3437 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051527.1 3854912 R 218491 CDS YP_051528.1 50122361 2882380 complement(3855704..3857041) 1 NC_004547.2 Similar to Rhizobium leguminosarum ImpJ SWALL:Q93EC4 (EMBL:AF361470) (446 aa) fasta scores: E(): 7.8e-61, 40.04% id in 447 aa, and to Vibrio cholerae hypothetical protein Vca0114 SWALL:Q9KN51 (EMBL:AE004353) (444 aa) fasta scores: E(): 4.7e-104, 60.04% id in 443 aa; hypothetical protein 3857041 2882380 ECA3438 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051528.1 3855704 R 218491 CDS YP_051529.1 50122362 2882381 complement(3857044..3857565) 1 NC_004547.2 Similar to Yersinia pestis lipoprotein ypo3596 or y0278 SWALL:Q8ZB33 (EMBL:AJ414157) (181 aa) fasta scores: E(): 4.7e-32, 52.6% id in 173 aa, and to Escherichia coli O157:H7 z0257 protein z0257 or ecs0226 SWALL:Q8X7V0 (EMBL:AE005198) (174 aa) fasta scores: E(): 2.1e-28, 47.3% id in 167 aa; lipoprotein 3857565 2882381 ECA3439 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_051529.1 3857044 R 218491 CDS YP_051530.1 50122363 2882382 complement(3857565..3858785) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3595 or y0279 SWALL:Q8ZB34 (EMBL:AJ414157) (438 aa) fasta scores: E(): 1.1e-36, 40.92% id in 435 aa, and to Escherichia coli O157:H7 hypothetical protein z0258 or ecs0227 SWALL:Q8X7U8 (EMBL:AE005198) (433 aa) fasta scores: E(): 1.3e-35, 39.2% id in 426 aa; hypothetical protein 3858785 2882382 ECA3440 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051530.1 3857565 R 218491 CDS YP_051531.1 50122364 2882361 complement(3858788..3859786) 1 NC_004547.2 Similar to Vibrio cholerae hypothetical protein Vca0111 SWALL:Q9KN54 (EMBL:AE004353) (338 aa) fasta scores: E(): 1.1e-59, 46.8% id in 329 aa, and to Yersinia pestis hypothetical protein Ypo3594 SWALL:Q8ZB35 (EMBL:AJ414157) (349 aa) fasta scores: E(): 2.5e-47, 54.6% id in 326 aa; hypothetical protein 3859786 2882361 ECA3441 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051531.1 3858788 R 218491 CDS YP_051532.1 50122365 2882362 complement(3859750..3861516) 1 NC_004547.2 Similar to Rhizobium leguminosarum ImpG SWALL:Q93EC7 (EMBL:AF361470) (593 aa) fasta scores: E(): 1.6e-27, 31.91% id in 611 aa, and to Vibrio cholerae hypothetical protein Vca0110 SWALL:Q9KN55 (EMBL:AE004353) (589 aa) fasta scores: E(): 9.2e-130, 51.52% id in 592 aa; hypothetical protein 3861516 2882362 ECA3442 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051532.1 3859750 R 218491 CDS YP_051533.1 50122366 2882363 complement(3861519..3861950) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3705 or y0039 SWALL:Q8ZAT5 (EMBL:AJ414158) (146 aa) fasta scores: E(): 2.3e-22, 45.71% id in 140 aa, and to Escherichia coli O157:H7 hypothetical protein z0261 or ecs0230 SWALL:Q8X7U0 (EMBL:AE005198) (137 aa) fasta scores: E(): 3.6e-14, 36.76% id in 136 aa; hypothetical protein 3861950 2882363 ECA3443 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051533.1 3861519 R 218491 CDS YP_051534.1 50122367 2881947 complement(3861956..3863434) 1 NC_004547.2 Similar to Rhizobium leguminosarum ImpC SWALL:Q93ED1 (EMBL:AF361470) (493 aa) fasta scores: E(): 6.4e-63, 37.36% id in 479 aa, and to Yersinia pestis hypothetical protein ypo3706 ypo3706 or y0038 SWALL:Q8ZAT4 (EMBL:AJ414158) (493 aa) fasta scores: E(): 3.1e-158, 78.09% id in 493 aa; hypothetical protein 3863434 2881947 ECA3444 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051534.1 3861956 R 218491 CDS YP_051535.1 50122368 2881948 complement(3863466..3863969) 1 NC_004547.2 Similar to Rhizobium leguminosarum ImpB SWALL:Q93ED2 (EMBL:AF361470) (181 aa) fasta scores: E(): 2.6e-09, 32.66% id in 150 aa, and to Yersinia pestis conserved hypothetical protein y0037 SWALL:AAM83632 (EMBL:AE013605) (166 aa) fasta scores: E(): 5.6e-39, 68.71% id in 163 aa; hypothetical protein 3863969 2881948 ECA3445 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051535.1 3863466 R 218491 CDS YP_051536.1 50122369 2885560 complement(3865039..3866442) 1 NC_004547.2 Similar to Pseudomonas aeruginosa outer membrane protein OprJ precursor OprJ or pa4597 SWALL:OPRJ_PSEAE (SWALL:Q51397) (479 aa) fasta scores: E(): 1.2e-94, 57.82% id in 460 aa, and to Pseudomonas putida TtgC SWALL:Q9WWZ8 (EMBL:AF031417) (484 aa) fasta scores: E(): 2.4e-70, 45.14% id in 474 aa, and to Pseudomonas aeruginosa outer membrane protein oprm precursor oprm or oprk or pa0427 SWALL:OPRM_PSEAE (SWALL:Q51487) (485 aa) fasta scores: E(): 1.9e-66, 46.78% id in 466 aa; multidrug resistance outer membrane protein 3866442 oprJ 2885560 oprJ Pectobacterium atrosepticum SCRI1043 multidrug resistance outer membrane protein YP_051536.1 3865039 R 218491 CDS YP_051537.1 50122370 2883538 complement(3866439..3869582) 1 NC_004547.2 Similar to Pseudomonas aeruginosa multidrug resistance protein MexB or pa0426 SWALL:MEXB_PSEAE (SWALL:P52002) (1046 aa) fasta scores: E(): 1.9e-202, 50.82% id in 1037 aa, and to uncultured bacterium MexD protein mexD SWALL:Q8RSM1 (EMBL:AJ431260) (1047 aa) fasta scores: E(): 0, 64.14% id in 1043 aa; multidrug resistance protein 3869582 mexB 2883538 mexB Pectobacterium atrosepticum SCRI1043 multidrug resistance protein YP_051537.1 3866439 R 218491 CDS YP_051538.1 50122371 2883337 complement(3869665..3870837) 1 NC_004547.2 Similar to Pseudomonas aeruginosa membrane fusion protein MexC or pa4599 SWALL:Q51395 (EMBL:U57969) (387 aa) fasta scores: E(): 6.2e-63, 50.78% id in 384 aa, and to uncultured bacterium MexC protein MexC SWALL:Q8RSM2 (EMBL:AJ431260) (388 aa) fasta scores: E(): 9.2e-63, 53.6% id in 375 aa; multidrug resistance protein 3870837 mexC 2883337 mexC Pectobacterium atrosepticum SCRI1043 multidrug resistance protein YP_051538.1 3869665 R 218491 CDS YP_051539.1 50122372 2882750 3871027..3871593 1 NC_004547.2 Similar to Pseudomonas aeruginosa transcriptional regulatory protein NfxB or pa4600 SWALL:NFXB_PSEAE (SWALL:P32265) (187 aa) fasta scores: E(): 3.1e-14, 35.55% id in 180 aa, and to uncultured bacterium NfxB protein NfxB SWALL:Q8RSM3 (EMBL:AJ431260) (186 aa) fasta scores: E(): 9e-17, 37.5% id in 176 aa; transcriptional regulator 3871593 nfxB 2882750 nfxB Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_051539.1 3871027 D 218491 CDS YP_051540.1 50122373 2881949 complement(3872000..3872587) 1 NC_004547.2 Similar to Caulobacter crescentus hypothetical protein Cc2071 SWALL:Q9A6M2 (EMBL:AE005880) (219 aa) fasta scores: E(): 7.3e-09, 30.05% id in 183 aa, and to Bacillus halodurans hypothetical protein Bh0736 SWALL:Q9KEW3 (EMBL:AP001509) (179 aa) fasta scores: E(): 0.00085, 28.32% id in 173 aa; hypothetical protein 3872587 2881949 ECA3450 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051540.1 3872000 R 218491 CDS YP_051541.1 50122374 2881950 3872983..3873474 1 NC_004547.2 hypothetical protein 3873474 2881950 ECA3451 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051541.1 3872983 D 218491 CDS YP_051542.1 50122375 2882279 3873467..3874063 1 NC_004547.2 Similar to Escherichia coli cell filamentation protein Fic or b3361 SWALL:FIC_ECOLI (SWALL:P20605) (200 aa) fasta scores: E(): 1e-26, 37.3% id in 193 aa; cell filamentation protein 3874063 fic 2882279 fic Pectobacterium atrosepticum SCRI1043 cell filamentation protein YP_051542.1 3873467 D 218491 CDS YP_051543.1 50122376 2882526 <3874071..3874256 1 NC_004547.2 Similar to the C-terminal regions of Bacteriophage P4 glycoprotein 3 siD SWALL:VSID_BPP4 (SWALL:P05461) (244 aa) fasta scores: E(): 0.04, 30.35% id in 56 aa, and to Salmonella typhi phage capsid protein t4524 SWALL:AAO71969 (EMBL:AE016849) (286 aa) fasta scores: E(): 0.0029, 43.63% id in 55 aa; phage capsid protein (partial) 3874256 2882526 ECA3453 Pectobacterium atrosepticum SCRI1043 phage capsid protein (partial) YP_051543.1 <3874071 D 218491 CDS YP_051544.1 50122377 2882527 3874253..3874501 1 NC_004547.2 Similar to Bacteriophage 186 late control gene B protein B SWALL:VPB_BP186 (SWALL:P08711) (72 aa) fasta scores: E(): 2.6e-10, 58.73% id in 63 aa, and to Salmonella typhi bacteriophage gene regulatory protein sty4826 SWALL:Q8Z107 (EMBL:AL627283) (79 aa) fasta scores: E(): 4.7e-13, 52.43% id in 82 aa. Also similar to ECA0414 (84.146% id. in 55 aa overlap), and to ECA0833 (46.000% id. in 50 aa overlap), and to ECA2599 (43.836% id. in 51 aa overlap).; bacteriophage regulatory protein 3874501 2882527 ECA3454 Pectobacterium atrosepticum SCRI1043 bacteriophage regulatory protein YP_051544.1 3874253 D 218491 CDS YP_051545.1 50122378 2882528 3874620..3874775 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty4632 SWALL:Q8Z1E2 (EMBL:AL627283) (72 aa) fasta scores: E(): 0.00018, 51.11% id in 45 aa, and to Ralstonia solanacearum hypothetical protein rsc0956 or rs04410 SWALL:Q8Y0T7 (EMBL:AL646061) (55 aa) fasta scores: E(): 6.6, 50% id in 24 aa; hypothetical protein 3874775 2882528 ECA3455 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051545.1 3874620 D 218491 CDS YP_051546.1 50122379 2881393 3875264..3876157 1 NC_004547.2 hypothetical protein 3876157 2881393 ECA3456 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051546.1 3875264 D 218491 CDS YP_051547.1 50122380 2881394 3876157..3876780 1 NC_004547.2 Weakly similar to Staphylococcus xylosus AgrC SWALL:Q8VSW2 (EMBL:AF346729) (224 aa) fasta scores: E(): 7.1, 24.59% id in 183 aa; hypothetical protein 3876780 2881394 ECA3457 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051547.1 3876157 D 218491 CDS YP_051548.1 50122381 2881395 complement(3876891..3877589) 1 NC_004547.2 Similar to Xanthomonas axonopodis hypothetical protein Xac3947 SWALL:Q8PFN3 (EMBL:AE012044) (193 aa) fasta scores: E(): 2.5e-14, 33.92% id in 168 aa; hypothetical protein 3877589 2881395 ECA3458 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051548.1 3876891 R 218491 CDS YP_051549.1 50122382 2881396 complement(3877589..3878830) 1 NC_004547.2 Similar to Xanthomonas axonopodis hypothetical protein Xac3948 SWALL:Q8PFN2 (EMBL:AE012044) (445 aa) fasta scores: E(): 3.4e-29, 36.03% id in 419 aa; hypothetical protein 3878830 2881396 ECA3459 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051549.1 3877589 R 218491 CDS YP_051550.1 50122383 2881992 complement(3878830..3880056) 1 NC_004547.2 Similar to Escherichia coli O157:H7 integrase protein for prophage CP-933i z0324 or ecs0289 SWALL:Q8X7K7 (EMBL:AE005203) (410 aa) fasta scores: E(): 7.6e-123, 75.3% id in 405 aa, and to Yersinia pestis phage integrase ypo4033 or y4052 SWALL:AAM87596 (EMBL:AJ414160) (397 aa) fasta scores: E(): 1.5e-94, 62.67% id in 367 aa; phage integrase 3880056 2881992 ECA3460 Pectobacterium atrosepticum SCRI1043 phage integrase YP_051550.1 3878830 R 218491 CDS YP_051551.1 50122384 2881993 3880772..3881191 1 NC_004547.2 hypothetical protein 3881191 2881993 ECA3461 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051551.1 3880772 D 218491 CDS YP_051552.1 50122385 2882451 complement(3881462..3882715) 1 NC_004547.2 Catalyzes the phosphorylation of L-glutamate during the proline biosynthesis pathway; gamma-glutamyl phosphate reductase 3882715 proA 2882451 proA Pectobacterium atrosepticum SCRI1043 gamma-glutamyl phosphate reductase YP_051552.1 3881462 R 218491 CDS YP_051553.1 50122386 2885407 complement(3882726..3883829) 1 NC_004547.2 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 3883829 proB 2885407 proB Pectobacterium atrosepticum SCRI1043 gamma-glutamyl kinase YP_051553.1 3882726 R 218491 CDS YP_051554.1 50122387 2884942 complement(3883953..3884327) 1 NC_004547.2 involved in the expression of csgBA which is involved in curli formation; interacts with sigmaS; DNA-binding transcriptional regulator Crl 3884327 crl 2884942 crl Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional regulator Crl YP_051554.1 3883953 R 218491 CDS YP_051555.1 50122388 2881994 complement(3884432..3885682) 1 NC_004547.2 forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc; FrsA may promote fermentation; fermentation/respiration switch protein 3885682 frsA 2881994 frsA Pectobacterium atrosepticum SCRI1043 fermentation/respiration switch protein YP_051555.1 3884432 R 218491 CDS YP_051556.1 50122389 2885812 complement(3885899..3886357) 1 NC_004547.2 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; xanthine-guanine phosphoribosyltransferase 3886357 gpt 2885812 gpt Pectobacterium atrosepticum SCRI1043 xanthine-guanine phosphoribosyltransferase YP_051556.1 3885899 R 218491 CDS YP_051557.1 50122390 2885189 3886800..3888260 1 NC_004547.2 Similar to Escherichia coli aminoacyl-histidine dipeptidase PepD or PepH or b0237 SWALL:PEPD_ECOLI (SWALL:P15288) (484 aa) fasta scores: E(): 1.4e-145, 77.27% id in 484 aa; aminoacyl-histidine dipeptidase 3888260 pepD 2885189 pepD Pectobacterium atrosepticum SCRI1043 aminoacyl-histidine dipeptidase YP_051557.1 3886800 D 218491 CDS YP_051558.1 50122391 2883354 complement(3888324..3889382) 1 NC_004547.2 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; DNA polymerase IV 3889382 dinB 2883354 dinB Pectobacterium atrosepticum SCRI1043 DNA polymerase IV YP_051558.1 3888324 R 218491 CDS YP_051559.1 50122392 2881804 complement(3889458..3890258) 1 NC_004547.2 Similar to Rhizobium loti probable DNA-binding protein mlr2155 SWALL:Q98J14 (EMBL:AP002999) (276 aa) fasta scores: E(): 2.2e-30, 38.69% id in 261 aa, and to Bradyrhizobium japonicum Bll4672 protein bll4672 SWALL:BAC49937 (EMBL:AP005952) (282 aa) fasta scores: E(): 4.5e-47, 49.61% id in 260 aa; DNA-binding protein 3890258 2881804 ECA3469 Pectobacterium atrosepticum SCRI1043 DNA-binding protein YP_051559.1 3889458 R 218491 CDS YP_051560.1 50122393 2881805 3890504..3891274 1 NC_004547.2 Similar to Shigella flexneri orf, conserved hypothetical protein yafe or sf0196 SWALL:AAN41858 (EMBL:AE015056) (256 aa) fasta scores: E(): 8.2e-58, 64.28% id in 252 aa, and to Salmonella typhi methyltransferase yafe or sty0280 SWALL:Q8Z984 (EMBL:AL627266) (256 aa) fasta scores: E(): 4.1e-54, 60.31% id in 252 aa; methyltransferase 3891274 2881805 ECA3470 Pectobacterium atrosepticum SCRI1043 methyltransferase YP_051560.1 3890504 D 218491 CDS YP_051561.1 50122394 2881806 3891668..3892402 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo3241 SWALL:Q8ZBY9 (EMBL:AJ414156) (246 aa) fasta scores: E(): 8.2e-67, 67.48% id in 243 aa, and to Salmonella typhimurium, and Salmonella typhi periplasmic protein yafk or stm0312 or sty0357 SWALL:Q8XF45 (EMBL:AE008709) (246 aa) fasta scores: E(): 8.7e-57, 56.85% id in 248 aa; hypothetical protein 3892402 2881806 ECA3471 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051561.1 3891668 D 218491 CDS YP_051562.1 50122395 2885356 complement(3892373..3893140) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3242 or y0948 SWALL:Q8ZBY8 (EMBL:AJ414156) (257 aa) fasta scores: E(): 9.9e-101, 86.22% id in 254 aa, and to Escherichia coli hypothetical protein yafj or b0223 SWALL:YAFJ_ECOLI (SWALL:Q47147) (255 aa) fasta scores: E(): 4.9e-95, 82.35% id in 255 aa; hypothetical protein 3893140 2885356 ECA3472 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051562.1 3892373 R 218491 CDS YP_051563.1 50122396 2882938 complement(3893233..3893814) 1 NC_004547.2 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 3893814 gmhA 2882938 gmhA Pectobacterium atrosepticum SCRI1043 phosphoheptose isomerase YP_051563.1 3893233 R 218491 CDS YP_051564.1 50122397 2883751 3894156..3896603 1 NC_004547.2 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; acyl-CoA dehydrogenase 3896603 fadE 2883751 fadE Pectobacterium atrosepticum SCRI1043 acyl-CoA dehydrogenase YP_051564.1 3894156 D 218491 CDS YP_051565.1 50122398 2885357 3896702..3897052 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi hypothetical protein yajd or stm0411 or sty0449 or t2452 SWALL:YAJD_SALTY (SWALL:P40777) (115 aa) fasta scores: E(): 3.7e-46, 91.3% id in 115 aa, and to Yersinia pestis hypothetical protein Ypo1179 SWALL:Q8ZGU8 (EMBL:AJ414146) (113 aa) fasta scores: E(): 3.6e-45, 87.61% id in 113 aa; hypothetical protein 3897052 2885357 ECA3475 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051565.1 3896702 D 218491 CDS YP_051566.1 50122399 2881595 complement(3897126..3898328) 1 NC_004547.2 phosphorylates methylthioribose to form methylthioribose-1-phosphate; involved in methionine salvage pathway; methylthioribose kinase 3898328 mtnK 2881595 mtnK Pectobacterium atrosepticum SCRI1043 methylthioribose kinase YP_051566.1 3897126 R 218491 CDS YP_051567.1 50122400 2885358 3898447..3899475 1 NC_004547.2 Similar to Thermotoga maritima translation initiation factor EIF-2B tm0911 SWALL:E2B_THEMA (SWALL:Q9X013) (343 aa) fasta scores: E(): 2.1e-43, 45.02% id in 342 aa, and to Xanthomonas campestris initiation factor EIF-2B xcc1573 SWALL:Q8PAB2 (EMBL:AE012258) (354 aa) fasta scores: E(): 1.3e-40, 44.81% id in 328 aa; translation initiation factor EIF-2B 3899475 2885358 ECA3477 Pectobacterium atrosepticum SCRI1043 translation initiation factor EIF-2B YP_051567.1 3898447 D 218491 CDS YP_051568.1 50122401 2885359 complement(3899535..3899801) 1 NC_004547.2 Similar to Vibrio cholerae hypothetical protein Vca0105 SWALL:Q9KN60 (EMBL:AE004353) (94 aa) fasta scores: E(): 2.3e-15, 55.31% id in 94 aa, and to Escherichia coli O6 hypothetical protein c1887 SWALL:AAN80347 (EMBL:AE016760) (94 aa) fasta scores: E(): 1.7e-13, 53.19% id in 94 aa; hypothetical protein 3899801 2885359 ECA3478 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051568.1 3899535 R 218491 CDS YP_051569.1 50122402 2885379 complement(3899841..3901556) 1 NC_004547.2 Weakly similar to Ralstonia solanacearum hypothetical protein rsp0177 or rs04689 SWALL:Q8XTD6 (EMBL:AL646077) (740 aa) fasta scores: E(): 0.00056, 26.34% id in 410 aa; hypothetical protein 3901556 2885379 ECA3479 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051569.1 3899841 R 218491 CDS YP_051570.1 50122403 2885380 complement(3901553..3902074) 1 NC_004547.2 Similar to Pseudomonas sp. CA10 hypothetical 18.9 kDa protein SWALL:Q9AQM6 (EMBL:AB047548) (170 aa) fasta scores: E(): 3.2, 25.17% id in 147 aa, and to Pseudomonas resinovorans hypothetical protein SWALL:BAC41541 (EMBL:AB088420) (170 aa) fasta scores: E(): 3.2, 25.17% id in 147 aa; hypothetical protein 3902074 2885380 ECA3480 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051570.1 3901553 R 218491 CDS YP_051571.1 50122404 2885381 complement(3902193..3902711) 1 NC_004547.2 hypothetical protein 3902711 2885381 ECA3481 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051571.1 3902193 R 218491 CDS YP_051572.1 50122405 2885232 complement(3902708..3903433) 1 NC_004547.2 Similar to Ralstonia solanacearum hypothetical protein rsc1499 or rs03806 SWALL:Q8XZA5 (EMBL:AL646064) (233 aa) fasta scores: E(): 6.9, 24.44% id in 180 aa; hypothetical protein 3903433 2885232 ECA3482 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051572.1 3902708 R 218491 CDS YP_051573.1 50122406 2885234 complement(3906045..3906590) 1 NC_004547.2 Similar to Pseudomonas aeruginosa probable oxidase pa1684 SWALL:Q9I341 (EMBL:AE004595) (181 aa) fasta scores: E(): 2.2e-40, 56.66% id in 180 aa, and to Klebsiella oxytoca E-2/E-2' protein SWALL:Q9ZFE7 (EMBL:AF102514) (179 aa) fasta scores: E(): 5.3e-50, 69.1% id in 178 aa; oxidase 3906590 2885234 ECA3485 Pectobacterium atrosepticum SCRI1043 oxidase YP_051573.1 3906045 R 218491 CDS YP_051574.1 50122407 2881427 complement(3906587..3907276) 1 NC_004547.2 Similar to Klebsiella oxytoca E-1 enzyme masA SWALL:Q48389 (EMBL:U00148) (229 aa) fasta scores: E(): 5e-51, 63.71% id in 226 aa, and to Pseudomonas aeruginosa enolase-phosphatase e-1 masa or pa1685 SWALL:Q9I340 (EMBL:AE004595) (249 aa) fasta scores: E(): 4.9e-40, 55.09% id in 216 aa; enolase 3907276 masA 2881427 masA Pectobacterium atrosepticum SCRI1043 enolase YP_051574.1 3906587 R 218491 CDS YP_051575.1 50122408 2885235 complement(3907273..3907890) 1 NC_004547.2 catalyzes the formation of diketo methylthiopentyl phosphate from methylribulose phosphate in the methionine salvage pathway; methylthioribulose-1-phosphate dehydratase 3907890 2885235 ECA3487 Pectobacterium atrosepticum SCRI1043 methylthioribulose-1-phosphate dehydratase YP_051575.1 3907273 R 218491 CDS YP_051576.1 50122409 2885239 3908071..3909228 1 NC_004547.2 catalyzes the transfer of an amino moiety; aminotransferase 3909228 2885239 ECA3488 Pectobacterium atrosepticum SCRI1043 aminotransferase YP_051576.1 3908071 D 218491 CDS YP_051577.1 50122410 2885240 3909216..3909983 1 NC_004547.2 Similar to Salmonella typhimurium amidohydrolase yafv or stm0308 SWALL:Q8ZRJ8 (EMBL:AE008709) (255 aa) fasta scores: E(): 3.3e-78, 72.94% id in 255 aa, and to Escherichia coli O157:H7 ec 3.5. amidase-type enzyme yafv or z0276 or ecs0246 SWALL:Q8X7R4 (EMBL:AE005200) (256 aa) fasta scores: E(): 7.5e-75, 70.58% id in 255 aa; hypothetical protein 3909983 2885240 ECA3489 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051577.1 3909216 D 218491 CDS YP_051578.1 50122411 2884197 complement(3910026..3911288) 1 NC_004547.2 allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; allantoate amidohydrolase 3911288 amaB 2884197 amaB Pectobacterium atrosepticum SCRI1043 allantoate amidohydrolase YP_051578.1 3910026 R 218491 CDS YP_051579.1 50122412 2881461 complement(3911285..3912529) 1 NC_004547.2 Similar to Bacillus subtilis purine catabolism protein PucG SWALL:PUCG_BACSU (SWALL:O32148) (416 aa) fasta scores: E(): 1.9e-78, 52.73% id in 402 aa, and to Xanthomonas campestris serine-pyruvate aminotransferase xcc0283 SWALL:Q8PDQ2 (EMBL:AE012124) (418 aa) fasta scores: E(): 2.2e-93, 59.7% id in 407 aa; purine catabolism protein 3912529 pucG 2881461 pucG Pectobacterium atrosepticum SCRI1043 purine catabolism protein YP_051579.1 3911285 R 218491 CDS YP_051580.1 50122413 2885241 complement(3912579..3913322) 1 NC_004547.2 Similar to Bacillus stearothermophilus glutamine transport ATP-binding protein GlnQ SWALL:GLNQ_BACST (SWALL:P27675) (242 aa) fasta scores: E(): 3.8e-43, 52.72% id in 239 aa, and to Yersinia pestis amino acid ABC transporter, ATP-binding protein ypo3254 or glnq or y0935 SWALL:Q8ZBY0 (EMBL:AJ414156) (248 aa) fasta scores: E(): 5.2e-78, 89.79% id in 245 aa; amino acid ABC transporter ATP-binding protein 3913322 2885241 ECA3492 Pectobacterium atrosepticum SCRI1043 amino acid ABC transporter ATP-binding protein YP_051580.1 3912579 R 218491 CDS YP_051581.1 50122414 2885102 complement(3913303..3913956) 1 NC_004547.2 Similar to Yersinia pestis amino acid ABC transporter, permease protein ypo3255 or y0934 SWALL:Q8ZBX9 (EMBL:AJ414156) (217 aa) fasta scores: E(): 2.3e-76, 88.47% id in 217 aa, and to Agrobacterium tumefaciens ABC transporter, membrane spanning protein atu1390 or agr_c_2569 SWALL:Q8UFK7 (EMBL:AE009100) (219 aa) fasta scores: E(): 2.6e-49, 59.9% id in 217 aa; amino acid ABC transporter permease 3913956 2885102 ECA3493 Pectobacterium atrosepticum SCRI1043 amino acid ABC transporter permease YP_051581.1 3913303 R 218491 CDS YP_051582.1 50122415 2885103 complement(3913953..3914621) 1 NC_004547.2 Similar to Yersinia pestis amino acid ABC transporter, permease protein ypo3256 or y0933 SWALL:AAM84515 (EMBL:AJ414156) (222 aa) fasta scores: E(): 1.1e-67, 79.27% id in 222 aa, and to Agrobacterium tumefaciens ABC transporter, membrane spanning protein atu1389 or agr_c_2567 SWALL:Q8UFK8 (EMBL:AE009100) (223 aa) fasta scores: E(): 3.1e-43, 57.27% id in 213 aa; amino acid ABC transporter permease 3914621 2885103 ECA3494 Pectobacterium atrosepticum SCRI1043 amino acid ABC transporter permease YP_051582.1 3913953 R 218491 CDS YP_051583.1 50122416 2885104 complement(3914634..3915440) 1 NC_004547.2 Similar to Yersinia pestis amino acid ABC transporter, periplasmic protein ypo3257 or y0932 SWALL:Q8ZBX7 (EMBL:AJ414156) (262 aa) fasta scores: E(): 3.7e-73, 76.8% id in 263 aa, and to Agrobacterium tumefaciens ABC transporter, substrate binding protein atu1388 or agr_c_2566 SWALL:Q8UFK9 (EMBL:AE009100) (261 aa) fasta scores: E(): 1.1e-56, 60.85% id in 258 aa; amino acid ABC transporter substrate binding protein 3915440 2885104 ECA3495 Pectobacterium atrosepticum SCRI1043 amino acid ABC transporter substrate binding protein YP_051583.1 3914634 R 218491 CDS YP_051584.1 50122417 2884923 complement(3916065..3916907) 1 NC_004547.2 Similar to Yersinia pestis RpiR-family transcriptional regulatory protein ypo3259 or y0931 SWALL:Q8ZBX5 (EMBL:AJ414156) (281 aa) fasta scores: E(): 1.9e-75, 73.28% id in 277 aa, and to Rhizobium meliloti hypothetical protein r02078 r02078 or smc04363 SWALL:Q92NU4 (EMBL:AL591789) (280 aa) fasta scores: E(): 3e-21, 33.33% id in 273 aa; transcriptional regulator 3916907 2884923 ECA3496 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_051584.1 3916065 R 218491 CDS YP_051585.1 50122418 2884924 3917101..3918687 1 NC_004547.2 Similar to Xanthomonas axonopodis gamma-glutamyltranspeptidase Ggt or xac0305 SWALL:Q8PQL8 (EMBL:AE011655) (526 aa) fasta scores: E(): 1.1e-98, 53.01% id in 530 aa, and to Vibrio cholerae gamma-glutamyltranspeptidase, vca0558 SWALL:Q9KM31 (EMBL:AE004386) (522 aa) fasta scores: E(): 2.1e-82, 48.24% id in 514 aa; gamma-glutamyltranspeptidase 3918687 2884924 ECA3497 Pectobacterium atrosepticum SCRI1043 gamma-glutamyltranspeptidase YP_051585.1 3917101 D 218491 CDS YP_051586.1 50122419 2884925 3918713..3918904 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo3260 SWALL:Q8ZBX4 (EMBL:AJ414156) (67 aa) fasta scores: E(): 3.1e-08, 55.73% id in 61 aa, and to Anabaena sp. hypothetical protein Asr1017 SWALL:Q8YY35 (EMBL:AP003584) (62 aa) fasta scores: E(): 0.018, 37.7% id in 61 aa; hypothetical protein 3918904 2884925 ECA3498 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051586.1 3918713 D 218491 CDS YP_051587.1 50122420 2884926 3918901..3920391 1 NC_004547.2 catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; amidase 3920391 2884926 ECA3499 Pectobacterium atrosepticum SCRI1043 amidase YP_051587.1 3918901 D 218491 CDS YP_051588.1 50122421 2884558 3920435..3920821 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3262 or y0927 SWALL:Q8ZBX2 (EMBL:AJ414156) (155 aa) fasta scores: E(): 2e-36, 73.17% id in 123 aa, and to Bradyrhizobium japonicum Blr1042 protein blr1042 SWALL:BAC46307 (EMBL:AP005938) (130 aa) fasta scores: E(): 3.8e-26, 57.6% id in 125 aa; hypothetical protein 3920821 2884558 ECA3500 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051588.1 3920435 D 218491 CDS YP_051589.1 50122422 2884559 complement(3920868..3921260) 1 NC_004547.2 Similar to Streptococcus mutans conserved hypothetical protein smu.1681C SWALL:AAN59320 (EMBL:AE014997) (124 aa) fasta scores: E(): 9.9e-24, 52.71% id in 129 aa, and to Brucella suis glyoxalase family protein br1900 SWALL:AAN30793 (EMBL:AE014480) (123 aa) fasta scores: E(): 1.4e-21, 53.9% id in 128 aa; hypothetical protein 3921260 2884559 ECA3501 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051589.1 3920868 R 218491 CDS YP_051590.1 50122423 2885464 3921930..3923132 1 NC_004547.2 Similar to Escherichia coli glycine betaine/L-proline transport ATP-binding protein ProV or b2677 SWALL:PROV_ECOLI (SWALL:P14175) (400 aa) fasta scores: E(): 2e-112, 80.95% id in 399 aa; glycine betaine/L-proline transport ATP-binding protein 3923132 proV 2885464 proV Pectobacterium atrosepticum SCRI1043 glycine betaine/L-proline transport ATP-binding protein YP_051590.1 3921930 D 218491 CDS YP_051591.1 50122424 2882458 3923125..3924306 1 NC_004547.2 with ProVX is involved in the high-affinity uptake of glycine betaine; glycine betaine transporter membrane protein 3924306 proW 2882458 proW Pectobacterium atrosepticum SCRI1043 glycine betaine transporter membrane protein YP_051591.1 3923125 D 218491 CDS YP_051592.1 50122425 2882459 3924544..3925548 1 NC_004547.2 with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine; glycine betaine transporter periplasmic subunit 3925548 proX 2882459 proX Pectobacterium atrosepticum SCRI1043 glycine betaine transporter periplasmic subunit YP_051592.1 3924544 D 218491 CDS YP_051593.1 50122426 2884560 complement(3925651..3926541) 1 NC_004547.2 Similar to Bradyrhizobium japonicum Blr6576 protein Blr6576 SWALL:BAC51841 (EMBL:AP005959) (283 aa) fasta scores: E(): 3.7e-64, 55.43% id in 285 aa, and to Streptomyces coelicolor hydrolase sco0461 or scf76.01 or scf51a.39 SWALL:CAD55442 (EMBL:AL939105) (289 aa) fasta scores: E(): 5.3e-53, 49.64% id in 280 aa; hydrolase 3926541 2884560 ECA3505 Pectobacterium atrosepticum SCRI1043 hydrolase YP_051593.1 3925651 R 218491 CDS YP_051594.1 50122427 2884674 3926632..3927213 1 NC_004547.2 Similar to Ralstonia solanacearum hypothetical protein rsp0306 or rs05465 SWALL:Q8XT11 (EMBL:AL646077) (199 aa) fasta scores: E(): 2.7e-17, 35.13% id in 185 aa, and to Bradyrhizobium japonicum Bll6575 protein Bll6575 SWALL:BAC51840 (EMBL:AP005959) (254 aa) fasta scores: E(): 1.7e-09, 31.65% id in 199 aa; hypothetical protein 3927213 2884674 ECA3506 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051594.1 3926632 D 218491 CDS YP_051595.1 50122428 2884675 complement(3927350..3928510) 1 NC_004547.2 Similar to Bradyrhizobium japonicum Blr0368 protein Blr0368 SWALL:BAC45633 (EMBL:AP005936) (398 aa) fasta scores: E(): 5.2e-15, 43.73% id in 359 aa, and to Yersinia pestis hypothetical protein ypo1149 or y3033 SWALL:Q8ZGX4 (EMBL:AJ414146) (334 aa) fasta scores: E(): 3.3e-12, 36.31% id in 347 aa; hypothetical protein 3928510 2884675 ECA3507 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051595.1 3927350 R 218491 CDS YP_051596.1 50122429 2884676 3928680..3929900 1 NC_004547.2 Similar to Yersinia pestis probable sugar transporter ypo3263 or y0926 SWALL:AAM84508 (EMBL:AJ414156) (399 aa) fasta scores: E(): 1.2e-102, 78.21% id in 381 aa, and to Salmonella typhi transmembrane transport protein sty2938 SWALL:Q8Z4E1 (EMBL:AL627276) (394 aa) fasta scores: E(): 1.5e-100, 74.11% id in 394 aa; transport protein 3929900 2884676 ECA3508 Pectobacterium atrosepticum SCRI1043 transport protein YP_051596.1 3928680 D 218491 CDS YP_051597.1 50122430 2884677 3930070..3930801 1 NC_004547.2 Similar to Yersinia pestis amino acid transporter ypo3264 or y0925 SWALL:Q8ZBX0 (EMBL:AJ414156) (257 aa) fasta scores: E(): 1.6e-68, 75.86% id in 232 aa, and to Escherichia coli O157:H7 orf, hypothetical protein z3983 or ecs3544 SWALL:Q8X908 (EMBL:AE005497) (245 aa) fasta scores: E(): 8.5e-63, 71.3% id in 230 aa; amino acid transporter 3930801 2884677 ECA3509 Pectobacterium atrosepticum SCRI1043 amino acid transporter YP_051597.1 3930070 D 218491 CDS YP_051598.1 50122431 2885054 3930798..3931139 1 NC_004547.2 Similar to Erwinia chrysanthemi YgaH protein YgaH SWALL:Q93KB3 (EMBL:AJ410307) (113 aa) fasta scores: E(): 5.6e-31, 72.97% id in 111 aa, and to Yersinia pestis membrane protein ypo3265 or y0924 SWALL:Q8ZBW9 (EMBL:AJ414156) (113 aa) fasta scores: E(): 7.9e-28, 65.13% id in 109 aa; hypothetical protein 3931139 2885054 ECA3510 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051598.1 3930798 D 218491 CDS YP_051599.1 50122432 2885127 3931316..3931831 1 NC_004547.2 DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux; negative regulator of the multidrug operon emrAB; transcriptional repressor MprA 3931831 emrR 2885127 emrR Pectobacterium atrosepticum SCRI1043 transcriptional repressor MprA YP_051599.1 3931316 D 218491 CDS YP_051600.1 50122433 2885208 3932105..3933280 1 NC_004547.2 Similar to Erwinia chrysanthemi EmrA protein EmrA SWALL:Q93KB1 (EMBL:AJ410307) (391 aa) fasta scores: E(): 7.9e-104, 72.63% id in 391 aa, and to Escherichia coli multidrug resistance protein A EmrA or b2685 SWALL:EMRA_ECOLI (SWALL:P27303) (390 aa) fasta scores: E(): 5.7e-94, 68.28% id in 391 aa; multidrug resistance protein A 3933280 emrA 2885208 emrA Pectobacterium atrosepticum SCRI1043 multidrug resistance protein A YP_051600.1 3932105 D 218491 CDS YP_051601.1 50122434 2885209 3933298..3934833 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 multidrug resistance protein B EmrB or b2686 or z3987 or ecs3548 SWALL:EMRB_ECOLI (SWALL:P27304) (512 aa) fasta scores: E(): 5.1e-176, 83.92% id in 510 aa; multidrug resistance protein B 3934833 emrB 2885209 emrB Pectobacterium atrosepticum SCRI1043 multidrug resistance protein B YP_051601.1 3933298 D 218491 CDS YP_051602.1 50122435 2883790 3935043..3936227 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 nucleoside permease NupC or Cru or b2393 or c2932 SWALL:NUPC_ECOLI (SWALL:P33031) (400 aa) fasta scores: E(): 1.2e-105, 71.75% id in 400 aa; nucleoside permease 3936227 nupC2 2883790 nupC2 Pectobacterium atrosepticum SCRI1043 nucleoside permease YP_051602.1 3935043 D 218491 CDS YP_051603.1 50122436 2885055 complement(3936426..3936890) 1 NC_004547.2 Similar to Pseudomonas syringae lipoprotein, pspto3094 SWALL:Q880Q8 (EMBL:AE016867) (153 aa) fasta scores: E(): 3e-09, 34.96% id in 143 aa, and to Xanthomonas campestris hypothetical protein Xcc3078 SWALL:Q8P692 (EMBL:AE012422) (146 aa) fasta scores: E(): 5.7e-12, 45.94% id in 111 aa; lipoprotein 3936890 2885055 ECA3515 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_051603.1 3936426 R 218491 CDS YP_051604.1 50122437 2885056 complement(3936945..3938096) 1 NC_004547.2 Similar to Erwinia chrysanthemi YfiF protein YfiF SWALL:Q93KA9 (EMBL:AJ410308) (366 aa) fasta scores: E(): 4.2e-86, 72.06% id in 383 aa, and to Yersinia pestis tRNA/rRNA methyltransferase yfif or ypo3269 SWALL:Q8ZBW5 (EMBL:AJ414156) (388 aa) fasta scores: E(): 4.4e-89, 67.76% id in 394 aa; methyltransferase 3938096 2885056 ECA3516 Pectobacterium atrosepticum SCRI1043 methyltransferase YP_051604.1 3936945 R 218491 CDS YP_051605.1 50122438 2884229 3938346..3938765 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri thioredoxin 2 TrxC or b2582 or c3107 or z3867 or ecs3448 or sf2644 SWALL:THI2_ECOLI (SWALL:P33636) (139 aa) fasta scores: E(): 1.5e-43, 74.81% id in 139 aa; thioredoxin 2 3938765 trxC 2884229 trxC Pectobacterium atrosepticum SCRI1043 thioredoxin 2 YP_051605.1 3938346 D 218491 CDS YP_051606.1 50122439 2885691 3938912..3939664 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3271 or y0918 SWALL:AAM84500 (EMBL:AJ414156) (249 aa) fasta scores: E(): 4.6e-56, 66.51% id in 218 aa, and to Shigella flexneri orf, conserved hypothetical protein yfip or sf2645 SWALL:AAN44141 (EMBL:AE015279) (249 aa) fasta scores: E(): 8.3e-54, 60.85% id in 235 aa; hypothetical protein 3939664 2885691 ECA3518 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051606.1 3938912 D 218491 CDS YP_051607.1 50122440 2885692 3939697..3942345 1 NC_004547.2 Similar to Yersinia pestis acetyltransferase ypo3272 SWALL:Q8ZBW2 (EMBL:AJ414156) (880 aa) fasta scores: E(): 0, 79.56% id in 881 aa, and to Escherichia coli hypothetical protein yfiq or b2584 SWALL:YFIQ_ECOLI (SWALL:P76594) (886 aa) fasta scores: E(): 0, 76.84% id in 881 aa; acyl-CoA synthetase 3942345 2885692 ECA3519 Pectobacterium atrosepticum SCRI1043 acyl-CoA synthetase YP_051607.1 3939697 D 218491 CDS YP_051608.1 50122441 2882469 3942520..3943878 1 NC_004547.2 catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; phosphatidylserine synthase 3943878 pssA 2882469 pssA Pectobacterium atrosepticum SCRI1043 phosphatidylserine synthase YP_051608.1 3942520 D 218491 CDS YP_051609.1 50122442 2885693 3943929..3944264 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein yfim or c3111 SWALL:Q8FF03 (EMBL:AE016764) (114 aa) fasta scores: E(): 3.8e-26, 56.36% id in 110 aa, and to Salmonella typhi hypothetical protein yfim or t0257 SWALL:AAO67983 (EMBL:AE016834) (107 aa) fasta scores: E(): 3.3e-25, 60% id in 105 aa; hypothetical protein 3944264 2885693 ECA3521 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051609.1 3943929 D 218491 CDS YP_051610.1 50122443 2883969 complement(3944261..3945541) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri alpha-ketoglutarate permease KgtP or WitA or b2587 or sf2649 SWALL:KGTP_ECOLI (SWALL:P17448) (432 aa) fasta scores: E(): 9.2e-143, 82.31% id in 424 aa; alpha-ketoglutarate transporter 3945541 kgtP 2883969 kgtP Pectobacterium atrosepticum SCRI1043 alpha-ketoglutarate transporter YP_051610.1 3944261 R 218491 CDS YP_051611.1 50122444 2885713 complement(3951618..3952181) 1 NC_004547.2 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; D,D-heptose 1,7-bisphosphate phosphatase 3952181 2885713 ECA3523 Pectobacterium atrosepticum SCRI1043 D,D-heptose 1,7-bisphosphate phosphatase YP_051611.1 3951618 R 218491 CDS YP_051612.1 50122445 2883541 3952362..3953393 1 NC_004547.2 part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit 3953393 metN 2883541 metN Pectobacterium atrosepticum SCRI1043 DL-methionine transporter ATP-binding subunit YP_051612.1 3952362 D 218491 CDS YP_051613.1 50122446 2883940 3953386..3954039 1 NC_004547.2 part of the MetNIQ methionine uptake system; DL-methionine transporter permease 3954039 metI 2883940 metI Pectobacterium atrosepticum SCRI1043 DL-methionine transporter permease YP_051613.1 3953386 D 218491 CDS YP_051614.1 50122447 2883536 3954101..3954916 1 NC_004547.2 Similar to Escherichia coli D-methionine-binding lipoprotein MetQ precursor MetQ or b0197 SWALL:METQ_ECOLI (SWALL:P28635) (271 aa) fasta scores: E(): 3.6e-88, 87.82% id in 271 aa; DL-methionine transporter substrate-binding subunit 3954916 metQ 2883536 metQ Pectobacterium atrosepticum SCRI1043 DL-methionine transporter substrate-binding subunit YP_051614.1 3954101 D 218491 CDS YP_051615.1 50122448 2884514 3955024..3955434 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 protein RcsF or b0196 or c0237 SWALL:RCSF_ECOLI (SWALL:P28633) (134 aa) fasta scores: E(): 6e-20, 56.61% id in 136 aa, and to Yersinia pestis lipoprotein RcsF or ypo1070 or y3107 SWALL:AAM86657 (EMBL:AJ414146) (135 aa) fasta scores: E(): 1.4e-21, 60.14% id in 138 aa; outer membrane lipoprotein 3955434 rcsF 2884514 rcsF Pectobacterium atrosepticum SCRI1043 outer membrane lipoprotein YP_051615.1 3955024 D 218491 CDS YP_051616.1 50122449 2885714 3955431..3956147 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1069 or y3108 SWALL:Q8ZH42 (EMBL:AJ414146) (235 aa) fasta scores: E(): 1.1e-77, 80.34% id in 234 aa, and to Escherichia coli O6 hypothetical protein yaeb or c0236 SWALL:AAN78728 (EMBL:AE016755) (235 aa) fasta scores: E(): 1e-64, 69.65% id in 234 aa; hypothetical protein 3956147 2885714 ECA3528 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051616.1 3955431 D 218491 CDS YP_051617.1 50122450 2885463 3956293..3958011 1 NC_004547.2 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 3958011 proS 2885463 proS Pectobacterium atrosepticum SCRI1043 prolyl-tRNA synthetase YP_051617.1 3956293 D 218491 CDS YP_051618.1 50122451 2884480 complement(3958117..3959109) 1 NC_004547.2 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor controls a regulon of genes required for protection against external stresses; RNA polymerase sigma factor RpoS 3959109 rpoS 2884480 rpoS Pectobacterium atrosepticum SCRI1043 RNA polymerase sigma factor RpoS YP_051618.1 3958117 R 218491 CDS YP_051619.1 50122452 2881292 complement(3959163..3960197) 1 NC_004547.2 outer membrane lipoprotein involved in stationary-phase cell survival; similar to LppB virulence determinant from Haemophilus somnus; lipoprotein NlpD 3960197 nlpD 2881292 nlpD Pectobacterium atrosepticum SCRI1043 lipoprotein NlpD YP_051619.1 3959163 R 218491 CDS YP_051620.1 50122453 2881374 complement(3960622..3961248) 1 NC_004547.2 catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase 3961248 pcm 2881374 pcm Pectobacterium atrosepticum SCRI1043 protein-L-isoaspartate O-methyltransferase YP_051620.1 3960622 R 218491 CDS YP_051621.1 50122454 2885715 complement(3961391..3962437) 1 NC_004547.2 catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D 3962437 truD 2885715 truD Pectobacterium atrosepticum SCRI1043 tRNA pseudouridine synthase D YP_051621.1 3961391 R 218491 CDS YP_051622.1 50122455 2882185 complement(3962555..3963052) 1 NC_004547.2 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3963052 ispF 2882185 ispF Pectobacterium atrosepticum SCRI1043 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_051622.1 3962555 R 218491 CDS YP_051623.1 50122456 2881968 complement(3963091..3963804) 1 NC_004547.2 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; MEP cytidylyltransferase; MCT; catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; forms homodimers; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3963804 ispD 2881968 ispD Pectobacterium atrosepticum SCRI1043 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_051623.1 3963091 R 218491 CDS YP_051624.1 50122457 2884011 complement(3963808..3964143) 1 NC_004547.2 forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; cell division protein FtsB 3964143 ftsB 2884011 ftsB Pectobacterium atrosepticum SCRI1043 cell division protein FtsB YP_051624.1 3963808 R 218491 CDS YP_051625.1 50122458 2885716 3964485..3965270 1 NC_004547.2 Similar to Neisseria gonorrhoeae histidine-binding protein precursor HisJ SWALL:HISJ_NEIGO (SWALL:Q06758) (268 aa) fasta scores: E(): 6.2e-32, 40.4% id in 250 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 glutamine-binding periplasmic protein precursor GlnH or b0811 or c0896 or z1033 or ecs0889 SWALL:GLNH_ECOLI (SWALL:P10344) (248 aa) fasta scores: E(): 1e-19, 33.61% id in 235 aa; amino acid-binding protein 3965270 2885716 ECA3537 Pectobacterium atrosepticum SCRI1043 amino acid-binding protein YP_051625.1 3964485 D 218491 CDS YP_051626.1 50122459 2884015 3965404..3966168 1 NC_004547.2 Similar to Clostridium perfringens probable amino acid ABC transporter cpe0601 SWALL:Q8XMT7 (EMBL:AP003187) (223 aa) fasta scores: E(): 2.4e-22, 38.64% id in 251 aa, and to Rhizobium loti amino acid ABC transporter, permease protein mll4276 SWALL:Q98EE7 (EMBL:AP003003) (269 aa) fasta scores: E(): 1.2e-21, 31.53% id in 241 aa; amino acid ABC transporter 3966168 2884015 ECA3538 Pectobacterium atrosepticum SCRI1043 amino acid ABC transporter YP_051626.1 3965404 D 218491 CDS YP_051627.1 50122460 2884016 3966155..3966877 1 NC_004547.2 Similar to Methanosarcina mazei glutamine transporter, ATP-binding protein GlnQ or mm1941 SWALL:Q8PVM2 (EMBL:AE013431) (240 aa) fasta scores: E(): 2e-55, 67.5% id in 240 aa, and to Oceanobacillus iheyensis glutamine ABC transporter ATP-binding protein ob1006 SWALL:Q8CUV1 (EMBL:AP004596) (240 aa) fasta scores: E(): 8.9e-55, 64.16% id in 240 aa; amino acid ABC transporter ATP-binding protein 3966877 2884016 ECA3539 Pectobacterium atrosepticum SCRI1043 amino acid ABC transporter ATP-binding protein YP_051627.1 3966155 D 218491 CDS YP_051628.1 50122461 2884017 complement(3966954..3967298) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo3363 SWALL:Q8ZBP4 (EMBL:AJ414156) (105 aa) fasta scores: E(): 8.9e-24, 60.9% id in 110 aa, and to Klebsiella aerogenes YgbE SWALL:Q9EYY2 (EMBL:AF308468) (118 aa) fasta scores: E(): 5.4e-15, 47.32% id in 112 aa; hypothetical protein 3967298 2884017 ECA3540 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051628.1 3966954 R 218491 CDS YP_051629.1 50122462 2882244 complement(3967344..3967961) 1 NC_004547.2 converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis; adenylylsulfate kinase 3967961 cysC 2882244 cysC Pectobacterium atrosepticum SCRI1043 adenylylsulfate kinase YP_051629.1 3967344 R 218491 CDS YP_051630.1 50122463 2882031 complement(3967963..3969453) 1 NC_004547.2 may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ; sulfate adenylyltransferase subunit 1 3969453 cysN 2882031 cysN Pectobacterium atrosepticum SCRI1043 sulfate adenylyltransferase subunit 1 YP_051630.1 3967963 R 218491 CDS YP_051631.1 50122464 2882395 complement(3969465..3970373) 1 NC_004547.2 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; sulfate adenylyltransferase subunit 2 3970373 cysD 2882395 cysD Pectobacterium atrosepticum SCRI1043 sulfate adenylyltransferase subunit 2 YP_051631.1 3969465 R 218491 CDS YP_051632.1 50122465 2882397 complement(3970383..3971825) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 siroheme synthase [includes: uroporphyrin-III C-methyltransferase; precorrin-2 oxidase; ferrochelatase] CysG or b3368 or z4729 or ecs4219 SWALL:CYSG_ECOLI (SWALL:P11098) (457 aa) fasta scores: E(): 9.1e-87, 56.15% id in 463 aa; multifunctional uroporphyrin-III C-methyltransferase/precorrin-2 oxidase/ferrochelatase 3971825 cysG1 2882397 cysG1 Pectobacterium atrosepticum SCRI1043 multifunctional uroporphyrin-III C-methyltransferase/precorrin-2 oxidase/ferrochelatase YP_051632.1 3970383 R 218491 CDS YP_051633.1 50122466 2882116 complement(3972135..3972869) 1 NC_004547.2 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; phosphoadenosine phosphosulfate reductase 3972869 cysH 2882116 cysH Pectobacterium atrosepticum SCRI1043 phosphoadenosine phosphosulfate reductase YP_051633.1 3972135 R 218491 CDS YP_051634.1 50122467 2882117 complement(3972882..3974615) 1 NC_004547.2 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; sulfite reductase subunit beta 3974615 cysI 2882117 cysI Pectobacterium atrosepticum SCRI1043 sulfite reductase subunit beta YP_051634.1 3972882 R 218491 CDS YP_051635.1 50122468 2883908 complement(3974615..3976444) 1 NC_004547.2 catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate; a flavoprotein with flavin reductase activity; sulfite reductase subunit alpha 3976444 cysJ 2883908 cysJ Pectobacterium atrosepticum SCRI1043 sulfite reductase subunit alpha YP_051635.1 3974615 R 218491 CDS YP_051636.1 50122469 2883942 complement(3976723..3978447) 1 NC_004547.2 Similar to Xanthomonas campestris hypothetical protein Xcc0350 SWALL:Q8PDI8 (EMBL:AE012131) (413 aa) fasta scores: E(): 6.6e-09, 25.67% id in 261 aa, and to Pseudomonas aeruginosa hypothetical protein Pa4108 SWALL:Q9HWS0 (EMBL:AE004827) (414 aa) fasta scores: E(): 3.4e-08, 25.81% id in 275 aa; hypothetical protein 3978447 2883942 ECA3548 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051636.1 3976723 R 218491 CDS YP_051637.1 50122470 2883943 3978974..3979714 1 NC_004547.2 Similar to Vibrio vulnificus response regulator VieA vv21511 SWALL:AAO08375 (EMBL:AE016813) (386 aa) fasta scores: E(): 5.5e-16, 30.04% id in 233 aa, and to Anabaena sp. two-component response regulator alr1230 SWALL:Q8YXI3 (EMBL:AP003585) (403 aa) fasta scores: E(): 7.6e-16, 30.35% id in 224 aa; signaling protein 3979714 2883943 ECA3549 Pectobacterium atrosepticum SCRI1043 signaling protein YP_051637.1 3978974 D 218491 CDS YP_051638.1 50122471 2883944 3979929..3981608 1 NC_004547.2 hypothetical protein 3981608 2883944 ECA3550 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051638.1 3979929 D 218491 CDS YP_051639.1 50122472 2883945 complement(3981679..3982971) 1 NC_004547.2 Similar to Erwinia chrysanthemi periplasmic binding protein precursor TogB SWALL:Q93KB7 (EMBL:AJ305144) (430 aa) fasta scores: E(): 8.1e-98, 56.7% id in 425 aa, and to Yersinia pestis sugar-binding protein ypo1719 or TogB or y1881 SWALL:Q8ZFI4 (EMBL:AJ414150) (430 aa) fasta scores: E(): 1.4e-93, 55.47% id in 411 aa. Also similar to ECA2406 (TogB) (56.398% id) and to ECA2210 (47.442% id); periplasmic-binding protein 3982971 2883945 ECA3551 Pectobacterium atrosepticum SCRI1043 periplasmic-binding protein YP_051639.1 3981679 R 218491 CDS YP_051640.1 50122473 2883697 3983509..3984855 1 NC_004547.2 Similar to Prevotella ruminicola polygalacturonase SWALL:Q9WXE7 (EMBL:AB022865) (494 aa) fasta scores: E(): 3.9e-17, 23.87% id in 423 aa, and to Agrobacterium tumefaciens polygalacturonase atu4560 or agr_l_619 SWALL:Q8U794 (EMBL:AE009384) (453 aa) fasta scores: E(): 2.8e-56, 36.03% id in 444 aa; polygalacturonase 3984855 2883697 ECA3552 Pectobacterium atrosepticum SCRI1043 polygalacturonase YP_051640.1 3983509 D 218491 CDS YP_051641.1 50122474 2883698 3984884..3985300 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri 6-pyruvoyl tetrahydrobiopterin synthase YgcM or b2765 or z4075 or ecs3620 or sf2781 SWALL:PTPS_ECOLI (SWALL:Q46903) (121 aa) fasta scores: E(): 8.1e-44, 86.66% id in 120 aa; 6-pyruvoyl tetrahydrobiopterin synthase 3985300 2883698 ECA3553 Pectobacterium atrosepticum SCRI1043 6-pyruvoyl tetrahydrobiopterin synthase YP_051641.1 3984884 D 218491 CDS YP_051642.1 50122475 2883699 complement(3985365..3986036) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi organic radical activating enzymes ygcf or stm2951 or sty3080 SWALL:Q8XEY5 (EMBL:AE008835) (223 aa) fasta scores: E(): 1.3e-75, 81.16% id in 223 aa, and to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein ygcf ygcf or b2777 or z4089 or ecs3633 or sf2790 SWALL:YGCF_ECOLI (SWALL:P55139) (223 aa) fasta scores: E(): 2.8e-75, 80.71% id in 223 aa; hypothetical protein 3986036 2883699 ECA3554 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051642.1 3985365 R 218491 CDS YP_051643.1 50122476 2885086 3986238..3987221 1 NC_004547.2 Similar to Erwinia chrysanthemi metallo hydrolase precursor Meh SWALL:CAC83617 (EMBL:AJ292045) (324 aa) fasta scores: E(): 8.6e-80, 65.64% id in 326 aa, and to Plesiomonas sp. M6 methyl parathion hydrolase Mpd SWALL:Q9ALW1 (EMBL:AF338729) (331 aa) fasta scores: E(): 1.8e-46, 47.5% id in 320 aa. Also similar to ECA3557 (52.761% id. in 326 aa overlap); metallo hydrolase 3987221 meh 2885086 meh Pectobacterium atrosepticum SCRI1043 metallo hydrolase YP_051643.1 3986238 D 218491 CDS YP_051644.1 50122477 2883662 complement(3987237..3988169) 1 NC_004547.2 Similar to Pseudomonas aeruginosa MexT protein MexT SWALL:O87785 (EMBL:AJ007825) (304 aa) fasta scores: E(): 3.2e-33, 36.3% id in 303 aa, and to Burkholderia cepacia DntR SWALL:Q8VUD7 (EMBL:AF169302) (301 aa) fasta scores: E(): 5.8e-33, 35.88% id in 301 aa; LysR family transcriptional regulator 3988169 2883662 ECA3556 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_051644.1 3987237 R 218491 CDS YP_051645.1 50122478 2883663 3988268..3989257 1 NC_004547.2 Similar to Erwinia chrysanthemi metallo hydrolase precursor Meh SWALL:CAC83617 (EMBL:AJ292045) (324 aa) fasta scores: E(): 1.8e-68, 56% id in 325 aa, and to Plesiomonas sp. DLL-1 methyl parathion degrading protein SWALL:Q93SP1 (EMBL:AY029773) (341 aa) fasta scores: E(): 5e-49, 47.41% id in 310 aa. Also similar to ECA3555 (52.761% id. in 326 aa overlap); metallo hydrolase 3989257 2883663 ECA3557 Pectobacterium atrosepticum SCRI1043 metallo hydrolase YP_051645.1 3988268 D 218491 CDS YP_051646.1 50122479 2883664 3989266..3990012 1 NC_004547.2 Similar to Photorhabdus luminescens Orf29 SWALL:AAO17195 (EMBL:AF346500) (248 aa) fasta scores: E(): 6e-74, 81.04% id in 248 aa, and to Escherichia coli hypothetical oxidoreductase ygff or b2902 SWALL:YGFF_ECOLI (SWALL:P52037) (247 aa) fasta scores: E(): 1.5e-55, 63.26% id in 245 aa; short chain dehydrogenase 3990012 2883664 ECA3558 Pectobacterium atrosepticum SCRI1043 short chain dehydrogenase YP_051646.1 3989266 D 218491 CDS YP_051647.1 50122480 2884633 complement(3990452..3991591) 1 NC_004547.2 Similar to Erwinia chrysanthemi RhiN protein RhiN SWALL:CAC83616 (EMBL:AJ292045) (379 aa) fasta scores: E(): 9e-146, 87.07% id in 379 aa, and to Salmonella typhimurium cytoplasmic protein stm1911 SWALL:Q8ZNU8 (EMBL:AE008785) (379 aa) fasta scores: E(): 1.5e-128, 75.72% id in 379 aa. Also similar to ECA3749 (43.810% id. in 315 aa overlap); plant-inducible protein 3991591 rhiN 2884633 rhiN Pectobacterium atrosepticum SCRI1043 plant-inducible protein YP_051647.1 3990452 R 218491 CDS YP_051648.1 50122481 2883658 complement(3991635..3993194) 1 NC_004547.2 Similar to Erwinia chrysanthemi oligogalacturonide transporter TogT SWALL:Q93KC2 (EMBL:AJ305143) (508 aa) fasta scores: E(): 1.2e-83, 42% id in 519 aa. Also similar to ECA0817 (TogT) (40.426% id. in 517 aa overlap); oligogalacturonide transporter 3993194 2883658 ECA3560 Pectobacterium atrosepticum SCRI1043 oligogalacturonide transporter YP_051648.1 3991635 R 218491 CDS YP_051649.1 50122482 2883659 complement(3993498..3994388) 1 NC_004547.2 Similar to Streptomyces antibioticus transcriptional regulatory protein AraB AbaB SWALL:ARAB_STRAT (SWALL:P52659) (301 aa) fasta scores: E(): 4e-16, 32.78% id in 302 aa, and to Streptomyces coelicolor LysR-family transcriptional regulator sco6801 or sc1a2.10 SWALL:Q9L231 (EMBL:AL939129) (300 aa) fasta scores: E(): 1.2e-09, 30.9% id in 288 aa; LysR family transcriptional regulator 3994388 2883659 ECA3561 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_051649.1 3993498 R 218491 CDS YP_051650.1 50122483 2881348 3994559..3995977 1 NC_004547.2 Similar to Pseudomonas sp. coniferyl aldehyde dehydrogenase CalB SWALL:CALB_PSESP (SWALL:O86447) (480 aa) fasta scores: E(): 1.4e-97, 55.5% id in 463 aa, and to Caulobacter crescentus probable coniferyl aldehyde dehydrogenase CalB or cc1849 SWALL:CALB_CAUCR (SWALL:Q9A777) (485 aa) fasta scores: E(): 2.5e-85, 50.96% id in 467 aa; coniferyl aldehyde dehydrogenase 3995977 calB 2881348 calB Pectobacterium atrosepticum SCRI1043 coniferyl aldehyde dehydrogenase YP_051650.1 3994559 D 218491 CDS YP_051651.1 50122484 2883660 3996022..3996702 1 NC_004547.2 Similar to Xanthomonas axonopodis nonf-related protein NonF or xac3491 SWALL:Q8PGX1 (EMBL:AE011997) (226 aa) fasta scores: E(): 1.8e-58, 68.77% id in 221 aa, and to Rhizobium meliloti hypothetical protein rb0205 or smb20212 SWALL:Q92WX2 (EMBL:AL603642) (226 aa) fasta scores: E(): 3.3e-57, 66.96% id in 224 aa; hypothetical protein 3996702 2883660 ECA3563 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051651.1 3996022 D 218491 CDS YP_051652.1 50122485 2883661 complement(3996793..3997815) 1 NC_004547.2 Similar to Escherichia coli iron-chelating periplasmic-binding protein SWALL:Q8VR80 (EMBL:AF447814) (332 aa) fasta scores: E(): 7.3e-53, 47.19% id in 303 aa, and to Methanosarcina acetivorans iron ma1222 SWALL:Q8TRF8 (EMBL:AE010789) (365 aa) fasta scores: E(): 1.2e-30, 33.72% id in 338 aa; iron-chelating periplasmic-binding protein 3997815 2883661 ECA3564 Pectobacterium atrosepticum SCRI1043 iron-chelating periplasmic-binding protein YP_051652.1 3996793 R 218491 CDS YP_051653.1 50122486 2883636 complement(3997875..4000067) 1 NC_004547.2 Similar to Yersinia enterocolitica ferrichrome receptor FcuA precursor fcuA SWALL:FCUA_YEREN (SWALL:Q05202) (758 aa) fasta scores: E(): 2.8e-42, 29.09% id in 787 aa, and to Escherichia coli O6 hypothetical protein c0294 or c2518 SWALL:AAN80973 (EMBL:AE016755) (721 aa) fasta scores: E(): 1.5e-160, 57.22% id in 720 aa; TonB dependent receptor 4000067 2883636 ECA3565 Pectobacterium atrosepticum SCRI1043 TonB dependent receptor YP_051653.1 3997875 R 218491 CDS YP_051654.1 50122487 2884919 complement(4000448..4001743) 1 NC_004547.2 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 4001743 eno 2884919 eno Pectobacterium atrosepticum SCRI1043 phosphopyruvate hydratase YP_051654.1 4000448 R 218491 CDS YP_051655.1 50122488 2882679 complement(4001842..4003479) 1 NC_004547.2 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 4003479 pyrG 2882679 pyrG Pectobacterium atrosepticum SCRI1043 CTP synthetase YP_051655.1 4001842 R 218491 CDS YP_051656.1 50122489 2881438 complement(4003706..4004518) 1 NC_004547.2 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; nucleoside triphosphate pyrophosphohydrolase 4004518 mazG 2881438 mazG Pectobacterium atrosepticum SCRI1043 nucleoside triphosphate pyrophosphohydrolase YP_051656.1 4003706 R 218491 CDS YP_051657.1 50122490 2885251 complement(4004843..4007080) 1 NC_004547.2 (p)ppGpp synthetase; catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP; GDP/GTP pyrophosphokinase 4007080 relA 2885251 relA Pectobacterium atrosepticum SCRI1043 GDP/GTP pyrophosphokinase YP_051657.1 4004843 R 218491 CDS YP_051658.1 50122491 2884443 complement(4007131..4008483) 1 NC_004547.2 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; 23S rRNA 5-methyluridine methyltransferase 4008483 rumA 2884443 rumA Pectobacterium atrosepticum SCRI1043 23S rRNA 5-methyluridine methyltransferase YP_051658.1 4007131 R 218491 CDS YP_051659.1 50122492 2885027 4008599..4011400 1 NC_004547.2 part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; hybrid sensory histidine kinase BarA 4011400 rpfA 2885027 rpfA Pectobacterium atrosepticum SCRI1043 hybrid sensory histidine kinase BarA YP_051659.1 4008599 D 218491 CDS YP_051660.1 50122493 2882925 complement(4011491..4012636) 1 NC_004547.2 Similar to Escherichia coli glycerate kinase 2 GarK or b3124 SWALL:GRK2_ECOLI (SWALL:P23524) (381 aa) fasta scores: E(): 6.4e-89, 70.5% id in 373 aa, and to Bacillus subtilis glycerate kinase GalxK or s14A SWALL:GRK_BACSU (SWALL:P42100) (382 aa) fasta scores: E(): 3.9e-78, 58.57% id in 379 aa; glycerate kinase 4012636 garK 2882925 garK Pectobacterium atrosepticum SCRI1043 glycerate kinase YP_051660.1 4011491 R 218491 CDS YP_051661.1 50122494 2882355 complement(4012813..4013697) 1 NC_004547.2 catalyzes the reduction of tartronate semialdehyde to glycerate; tartronate semialdehyde reductase 4013697 garR 2882355 garR Pectobacterium atrosepticum SCRI1043 tartronate semialdehyde reductase YP_051661.1 4012813 R 218491 CDS YP_051662.1 50122495 2882354 complement(4013788..4014558) 1 NC_004547.2 cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate; alpha-dehydro-beta-deoxy-D-glucarate aldolase 4014558 garL 2882354 garL Pectobacterium atrosepticum SCRI1043 alpha-dehydro-beta-deoxy-D-glucarate aldolase YP_051662.1 4013788 R 218491 CDS YP_051663.1 50122496 2883605 complement(4014627..4015967) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 glucarate dehydratase GudD or b2787 or z4102 or ecs3647 SWALL:GUDH_ECOLI (SWALL:P76637) (445 aa) fasta scores: E(): 2.3e-156, 84.87% id in 443 aa; glucarate dehydratase 4015967 gudD 2883605 gudD Pectobacterium atrosepticum SCRI1043 glucarate dehydratase YP_051663.1 4014627 R 218491 CDS YP_051664.1 50122497 2883607 complement(4016005..4017357) 1 NC_004547.2 Similar to Escherichia coli glucarate dehydratase related protein GudX or b2788 SWALL:GUDX_ECOLI (SWALL:Q46915) (446 aa) fasta scores: E(): 1.7e-152, 81.83% id in 446 aa; glucarate dehydratase 4017357 gudX 2883607 gudX Pectobacterium atrosepticum SCRI1043 glucarate dehydratase YP_051664.1 4016005 R 218491 CDS YP_051665.1 50122498 2883606 complement(4017962..4019314) 1 NC_004547.2 Similar to Escherichia coli probable glucarate transporter GudP or b2789 SWALL:GUDP_ECOLI (SWALL:Q46916) (450 aa) fasta scores: E(): 3.5e-148, 80.49% id in 446 aa; glucarate transporter 4019314 gudP 2883606 gudP Pectobacterium atrosepticum SCRI1043 glucarate transporter YP_051665.1 4017962 R 218491 CDS YP_051666.1 50122499 2882924 4019875..4021449 1 NC_004547.2 Similar to Escherichia coli D-galactarate dehydratase GarD or b3128 SWALL:GARD_ECOLI (SWALL:P39829) (523 aa) fasta scores: E(): 1.3e-177, 85.65% id in 516 aa; D-galactarate dehydratase 4021449 garD 2882924 garD Pectobacterium atrosepticum SCRI1043 D-galactarate dehydratase YP_051666.1 4019875 D 218491 CDS YP_051667.1 50122500 2883637 4022115..4023650 1 NC_004547.2 Similar to Escherichia coli aerotaxis receptor Aer or Air or b3072 SWALL:AER_ECOLI (SWALL:P50466) (506 aa) fasta scores: E(): 3.8e-72, 44.13% id in 503 aa, and to Yersinia pestis methyl-accepting chemotaxis protein ypo1644 SWALL:Q8ZFP9 (EMBL:AJ414149) (526 aa) fasta scores: E(): 1.2e-89, 53.01% id in 515 aa; methyl-accepting chemotaxis protein 4023650 2883637 ECA3579 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_051667.1 4022115 D 218491 CDS YP_051668.1 50122501 2883638 4023825..4024229 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo2987 SWALL:Q8ZCJ8 (EMBL:AJ414154) (115 aa) fasta scores: E(): 0.012, 31.66% id in 120 aa, and to Escherichia coli protein FlxA or b1566 SWALL:FLXA_ECOLI (SWALL:P77609) (110 aa) fasta scores: E(): 0.94, 27.35% id in 117 aa. Also similar to ECA3581 (48.624% id. in 109 aa overlap); hypothetical protein 4024229 2883638 ECA3580 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051668.1 4023825 D 218491 CDS YP_051669.1 50122502 2883379 4024427..4024783 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo2987 SWALL:Q8ZCJ8 (EMBL:AJ414154) (115 aa) fasta scores: E(): 2.7e-07, 39.66% id in 121 aa, and to Escherichia coli protein FlxA or b1566 SWALL:FLXA_ECOLI (SWALL:P77609) (110 aa) fasta scores: E(): 0.075, 28.81% id in 118 aa. Also similar to ECA3580 (48.624% id. in 109 aa overlap); hypothetical protein 4024783 2883379 ECA3581 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051669.1 4024427 D 218491 CDS YP_051670.1 50122503 2883380 complement(4024876..4025097) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo2988 SWALL:Q8ZCJ7 (EMBL:AJ414154) (71 aa) fasta scores: E(): 8.4e-21, 79.7% id in 69 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein ypeb or b2410.1 or z3676 or ecs3282.1 SWALL:YPEB_ECOLI (SWALL:P56604) (72 aa) fasta scores: E(): 8.5e-21, 80.28% id in 71 aa; hypothetical protein 4025097 2883380 ECA3582 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051670.1 4024876 R 218491 CDS YP_051671.1 50122504 2883216 complement(4025196..4027241) 1 NC_004547.2 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 4027241 ligA 2883216 ligA Pectobacterium atrosepticum SCRI1043 NAD-dependent DNA ligase LigA YP_051671.1 4025196 R 218491 CDS YP_051672.1 50122505 2885289 complement(4027398..4028828) 1 NC_004547.2 catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 4028828 rfaE 2885289 rfaE Pectobacterium atrosepticum SCRI1043 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase YP_051672.1 4027398 R 218491 CDS YP_051673.1 50122506 2881768 complement(4029078..4031933) 1 NC_004547.2 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 4031933 glnE 2881768 glnE Pectobacterium atrosepticum SCRI1043 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_051673.1 4029078 R 218491 CDS YP_051674.1 50122507 2883381 complement(4031986..4033323) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo0652 SWALL:Q8ZI62 (EMBL:AJ414144) (435 aa) fasta scores: E(): 2.2e-84, 51.13% id in 442 aa, and to Escherichia coli hypothetical protein ygif or b3054 SWALL:YGIF_ECOLI (SWALL:P30871) (433 aa) fasta scores: E(): 2.1e-80, 48.86% id in 442 aa; hypothetical protein 4033323 2883381 ECA3586 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051674.1 4031986 R 218491 CDS YP_051675.1 50122508 2883382 4033670..4034290 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo0651 or y3528 SWALL:Q8ZI63 (EMBL:AJ414144) (207 aa) fasta scores: E(): 2.5e-57, 76.69% id in 206 aa, and to Salmonella typhimurium, and Salmonella typhi sh3 domain protein ygim or stm3203 or sty3382 SWALL:Q8XFH7 (EMBL:AE008847) (204 aa) fasta scores: E(): 1.4e-51, 71.84% id in 206 aa; signal transduction protein 4034290 2883382 ECA3587 Pectobacterium atrosepticum SCRI1043 signal transduction protein YP_051675.1 4033670 D 218491 CDS YP_051676.1 50122509 2881350 4034399..4035643 1 NC_004547.2 catalyzes the addition and repair of the essential 3'-terminal CCA sequence in tRNAs without using a nucleic acid template; phosphohydrolase activities include hydrolysis of pyrophosphate, 5'-nucleoside tri- and diphosphates, NADP, and 2'-AMP with the production of Pi, metal-dependent phosphodiesterase activity for 2',3'-cAMP, 2',3'-cGMP, and 2',3'-cCMP, and hydrolysis 2',3'-cyclic substrates with the formation of 2'-nucleotides and 3'-nucleotides; these phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases; multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase 4035643 cca 2881350 cca Pectobacterium atrosepticum SCRI1043 multifunctional tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase/phosphatase YP_051676.1 4034399 D 218491 CDS YP_051677.1 50122510 2882171 complement(4035704..4036522) 1 NC_004547.2 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; undecaprenyl pyrophosphate phosphatase 4036522 uppP 2882171 uppP Pectobacterium atrosepticum SCRI1043 undecaprenyl pyrophosphate phosphatase YP_051677.1 4035704 R 218491 CDS YP_051678.1 50122511 2882081 complement(4036671..4037027) 1 NC_004547.2 catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin; bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase 4037027 folB 2882081 folB Pectobacterium atrosepticum SCRI1043 bifunctional dihydroneopterin aldolase/dihydroneopterin triphosphate 2'-epimerase YP_051678.1 4036671 R 218491 CDS YP_051679.1 50122512 2883357 4037132..4037767 1 NC_004547.2 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY 4037767 2883357 ECA3591 Pectobacterium atrosepticum SCRI1043 glycerol-3-phosphate acyltransferase PlsY YP_051679.1 4037132 D 218491 CDS YP_051680.1 50122513 2883358 complement(4037846..4039432) 1 NC_004547.2 Similar to Escherichia coli methyl-accepting chemotaxis protein II Tar or CheM or b1886 SWALL:MCP2_ECOLI (SWALL:P07017) (553 aa) fasta scores: E(): 5.9e-60, 42.5% id in 527 aa; methyl-accepting chemotaxis protein 4039432 2883358 ECA3592 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_051680.1 4037846 R 218491 CDS YP_051681.1 50122514 2885574 4039680..4040210 1 NC_004547.2 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 4040210 ppa 2885574 ppa Pectobacterium atrosepticum SCRI1043 inorganic pyrophosphatase YP_051681.1 4039680 D 218491 CDS YP_051682.1 50122515 2883359 complement(4040304..4040654) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3522 or y0662 SWALL:Q8ZB97 (EMBL:AJ414157) (118 aa) fasta scores: E(): 9.8e-33, 71.05% id in 114 aa, and to Salmonella typhi hypothetical protein ytfp or t4465 SWALL:AAO71912 (EMBL:AE016849) (114 aa) fasta scores: E(): 1.3e-27, 62.83% id in 113 aa; hypothetical protein 4040654 2883359 ECA3594 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051682.1 4040304 R 218491 CDS YP_051683.1 50122516 2883268 complement(4040657..4044694) 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo3523 or y0661 SWALL:Q8ZB96 (EMBL:AJ414157) (1305 aa) fasta scores: E(): 0, 65.19% id in 1313 aa, and to Salmonella typhi exported protein ytfn or sty4769 SWALL:Q8Z149 (EMBL:AL627283) (1259 aa) fasta scores: E(): 0, 57.79% id in 1315 aa; hypothetical protein 4044694 2883268 ECA3595 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051683.1 4040657 R 218491 CDS YP_051684.1 50122517 2883269 complement(4044691..4046550) 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo3524 or y0659 SWALL:Q8ZB95 (EMBL:AJ414157) (578 aa) fasta scores: E(): 6.1e-181, 74.48% id in 580 aa, and to Salmonella typhimurium, and Salmonella typhi outer membrane protein ytfm or stm4409 or sty4768 SWALL:Q8XEL5 (EMBL:AE008906) (577 aa) fasta scores: E(): 6.6e-173, 71.55% id in 573 aa; hypothetical protein 4046550 2883269 ECA3596 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051684.1 4044691 R 218491 CDS YP_051685.1 50122518 2881209 4046883..4047521 1 NC_004547.2 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 4047521 msrA 2881209 msrA Pectobacterium atrosepticum SCRI1043 methionine sulfoxide reductase A YP_051685.1 4046883 D 218491 CDS YP_051686.1 50122519 2883270 4047693..4049018 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo3526 or y0657 SWALL:Q8ZB93 (EMBL:AJ414157) (443 aa) fasta scores: E(): 5.8e-144, 84.38% id in 442 aa, and to Salmonella typhimurium, and Salmonella typhi hemolysin-related protein ytfl or stm4407 or sty4766 SWALL:Q8XG66 (EMBL:AE008906) (447 aa) fasta scores: E(): 2.9e-135, 78.81% id in 439 aa; hypothetical protein 4049018 2883270 ECA3598 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051686.1 4047693 D 218491 CDS YP_051687.1 50122520 2883254 complement(4049083..4049289) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 hypothetical protein ytfk or b4217 or c5315 SWALL:YTFK_ECOLI (SWALL:P39318) (68 aa) fasta scores: E(): 2.1e-19, 79.1% id in 67 aa, and to Yersinia pestis hypothetical protein ypo3527 or y0656 SWALL:AAM84244 (EMBL:AJ414157) (70 aa) fasta scores: E(): 6.1e-19, 77.27% id in 66 aa; hypothetical protein 4049289 2883254 ECA3599 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051687.1 4049083 R 218491 CDS YP_051688.1 50122521 2883255 4049638..4050216 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo3528 SWALL:Q8ZB91 (EMBL:AJ414157) (187 aa) fasta scores: E(): 2.2e-43, 64.76% id in 193 aa, and to Salmonella typhimurium transcriptional regulator ytfj or stm4405 SWALL:Q8ZK73 (EMBL:AE008906) (185 aa) fasta scores: E(): 2.7e-42, 68.42% id in 171 aa; hypothetical protein 4050216 2883255 ECA3600 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051688.1 4049638 D 218491 CDS YP_051689.1 50122522 2882033 complement(4050219..4050959) 1 NC_004547.2 catalyzes the formation of AMP from adenosine-3',5'-bisphosphate; adenosine-3'(2'),5'-bisphosphate nucleotidase 4050959 cysQ 2882033 cysQ Pectobacterium atrosepticum SCRI1043 adenosine-3'(2'),5'-bisphosphate nucleotidase YP_051689.1 4050219 R 218491 CDS YP_051690.1 50122523 2884947 4051288..4053240 1 NC_004547.2 periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate; bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein 4053240 cpdB 2884947 cpdB Pectobacterium atrosepticum SCRI1043 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein YP_051690.1 4051288 D 218491 CDS YP_051691.1 50122524 2883256 4053431..4053985 1 NC_004547.2 Similar to Agrobacterium tumefaciens flavodoxin WrbA or atu4201 or agr_l_1309 SWALL:Q8U897 (EMBL:AE009349) (193 aa) fasta scores: E(): 1.2e-43, 65.73% id in 178 aa, and to Escherichia coli hypothetical 19.6 kDa protein SWALL:Q9F7X7 (EMBL:AF270497) (183 aa) fasta scores: E(): 3.8e-49, 69.78% id in 182 aa; flavodoxin 4053985 2883256 ECA3603 Pectobacterium atrosepticum SCRI1043 flavodoxin YP_051691.1 4053431 D 218491 CDS YP_051692.1 50122525 2883257 complement(4054049..4054471) 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo2981 SWALL:Q8ZCK3 (EMBL:AJ414154) (137 aa) fasta scores: E(): 7.6e-20, 42.3% id in 130 aa, and to Salmonella typhimurium, and Salmonella typhi periplasmic protein ypec or stm2407 or sty2648 SWALL:Q8XFD1 (EMBL:AE008808) (108 aa) fasta scores: E(): 1.2e-08, 37.16% id in 113 aa; hypothetical protein 4054471 2883257 ECA3604 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051692.1 4054049 R 218491 CDS YP_051693.1 50122526 2881467 4054763..4056430 1 NC_004547.2 Similar to Enterobacter cloacae indole-3-pyruvate decarboxylase IpdC SWALL:DCIP_ENTCL (SWALL:P23234) (552 aa) fasta scores: E(): 1.6e-115, 55.39% id in 556 aa, and to Salmonella typhimurium indole-3-pyruvate decarboxylase Ipd or stm2405 SWALL:Q93IM7 (EMBL:AJ401270) (550 aa) fasta scores: E(): 6.1e-118, 55.27% id in 559 aa; indole-3-pyruvate decarboxylase 4056430 ipdC 2881467 ipdC Pectobacterium atrosepticum SCRI1043 indole-3-pyruvate decarboxylase YP_051693.1 4054763 D 218491 CDS YP_051694.1 50122527 2883114 4056533..4057198 1 NC_004547.2 Involved in anaerobic NO protection and iron metabolism; iron-sulfur cluster repair di-iron protein 4057198 2883114 ECA3606 Pectobacterium atrosepticum SCRI1043 iron-sulfur cluster repair di-iron protein YP_051694.1 4056533 D 218491 CDS YP_051695.1 50122528 2882209 complement(4057307..4057927) 1 NC_004547.2 FKBP-type; rotamase; catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; peptidyl-prolyl cis-trans isomerase 4057927 fklB 2882209 fklB Pectobacterium atrosepticum SCRI1043 peptidyl-prolyl cis-trans isomerase YP_051695.1 4057307 R 218491 CDS YP_051696.1 50122529 2883115 4058330..4059040 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3533 or y0650 SWALL:Q8ZB86 (EMBL:AJ414157) (246 aa) fasta scores: E(): 7.2e-27, 42.8% id in 250 aa, and to Shigella flexneri orf, conserved hypothetical protein ytfb or sf4280 SWALL:AAN45698 (EMBL:AE015436) (193 aa) fasta scores: E(): 9e-23, 43.93% id in 198 aa; hypothetical protein 4059040 2883115 ECA3608 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051696.1 4058330 D 218491 CDS YP_051697.1 50122530 2883116 complement(4059037..4059399) 1 NC_004547.2 Similar to Corynebacterium efficiens conserved hypothetical protein ce0815 SWALL:BAC17625 (EMBL:AP005216) (119 aa) fasta scores: E(): 1.1e-17, 48.27% id in 116 aa, and to Rhizobium leguminosarum hypothetical 13.6 kDa protein SWALL:Q93EB8 (EMBL:AF361470) (115 aa) fasta scores: E(): 2.4e-16, 44.54% id in 110 aa; hypothetical protein 4059399 2883116 ECA3609 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051697.1 4059037 R 218491 CDS YP_051698.1 50122531 2883967 complement(4059527..4059979) 1 NC_004547.2 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 4059979 rplI 2883967 rplI Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L9 YP_051698.1 4059527 R 218491 CDS YP_051699.1 50122532 2884462 complement(4060021..4060248) 1 NC_004547.2 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 4060248 rpsR 2884462 rpsR Pectobacterium atrosepticum SCRI1043 30S ribosomal protein S18 YP_051699.1 4060021 R 218491 CDS YP_051700.1 50122533 2882325 complement(4060253..4060573) 1 NC_004547.2 binds single-stranded DNA at the primosome assembly site; primosomal replication protein N 4060573 priB 2882325 priB Pectobacterium atrosepticum SCRI1043 primosomal replication protein N YP_051700.1 4060253 R 218491 CDS YP_051701.1 50122534 2884476 complement(4060579..4060971) 1 NC_004547.2 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 4060971 rpsF 2884476 rpsF Pectobacterium atrosepticum SCRI1043 30S ribosomal protein S6 YP_051701.1 4060579 R 218491 CDS YP_051702.1 50122535 2883053 complement(4061153..4061905) 1 NC_004547.2 YjfP; esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro; unknown function and substrate in vivo; esterase 4061905 2883053 ECA3614 Pectobacterium atrosepticum SCRI1043 esterase YP_051702.1 4061153 R 218491 CDS YP_051703.1 50122536 2883054 4062200..4064140 1 NC_004547.2 Similar to Ralstonia solanacearum methyl-accepting chemotaxis transmembrane protein rsc3136 or rs00467 SWALL:Q8XUQ0 (EMBL:AL646073) (661 aa) fasta scores: E(): 2.9e-68, 39.38% id in 645 aa, and to Escherichia coli methyl-accepting chemotaxis protein II Tar or CheM or b1886 SWALL:MCP2_ECOLI (SWALL:P07017) (553 aa) fasta scores: E(): 1.9e-38, 44.34% id in 318 aa; methyl-accepting chemotaxis protein 4064140 2883054 ECA3615 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_051703.1 4062200 D 218491 CDS YP_051704.1 50122537 2883055 4064375..4065496 1 NC_004547.2 mutations in this gene result in a compromised ability for drug-inducible mexXY expression; expression is inducible by the same ribosome-targeting agents that induce mexXY; hypothetical protein 4065496 2883055 ECA3616 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051704.1 4064375 D 218491 CDS YP_051705.1 50122538 2882309 4065493..4066116 1 NC_004547.2 similar to release factor 1 and 2; peptide chain release factor-like protein 4066116 prfH 2882309 prfH Pectobacterium atrosepticum SCRI1043 peptide chain release factor-like protein YP_051705.1 4065493 D 218491 CDS YP_051706.1 50122539 2883056 complement(4066153..4066614) 1 NC_004547.2 hypothetical protein 4066614 2883056 ECA3618 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051706.1 4066153 R 218491 CDS YP_051707.1 50122540 2884497 4067108..4067416 1 NC_004547.2 in Escherichia coli, mutation of this gene affects biofilm maturation, stress response, and motility; biofilm stress and motility protein A 4067416 2884497 ECA3619 Pectobacterium atrosepticum SCRI1043 biofilm stress and motility protein A YP_051707.1 4067108 D 218491 CDS YP_051708.1 50122541 2884498 complement(4067480..4067878) 1 NC_004547.2 Similar to Salmonella typhimurium inner membrane protein yjfl or stm4374 SWALL:Q8ZK97 (EMBL:AE008905) (132 aa) fasta scores: E(): 2.3e-31, 63.63% id in 132 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical protein yjfl yjfl or b4184 or z5791 or ecs5160 SWALL:YJFL_ECOLI (SWALL:P39294) (132 aa) fasta scores: E(): 6.8e-31, 61.36% id in 132 aa; hypothetical protein 4067878 2884498 ECA3620 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051708.1 4067480 R 218491 CDS YP_051709.1 50122542 2884499 complement(4067902..4068636) 1 NC_004547.2 Specifically methylates the ribose of guanosine 2251 in 23S rRNA; 23S rRNA (guanosine-2'-O-)-methyltransferase 4068636 2884499 ECA3621 Pectobacterium atrosepticum SCRI1043 23S rRNA (guanosine-2'-O-)-methyltransferase YP_051709.1 4067902 R 218491 CDS YP_051710.1 50122543 2885034 complement(4068739..4071195) 1 NC_004547.2 3'-5'exoribonuclease that acts nonspecifically on poly(A), poly(U) and ribosomal RNAs; exoribonuclease R 4071195 rnr 2885034 rnr Pectobacterium atrosepticum SCRI1043 exoribonuclease R YP_051710.1 4068739 R 218491 CDS YP_051711.1 50122544 2885609 complement(4071237..4071662) 1 NC_004547.2 negatively regulates the transcription of genes upregulated by nitrosative stress; transcriptional repressor NsrR 4071662 2885609 ECA3623 Pectobacterium atrosepticum SCRI1043 transcriptional repressor NsrR YP_051711.1 4071237 R 218491 CDS YP_051712.1 50122545 2885610 4071959..4073530 1 NC_004547.2 Similar to Escherichia coli methyl-accepting chemotaxis protein II Tar or CheM or b1886 SWALL:MCP2_ECOLI (SWALL:P07017) (553 aa) fasta scores: E(): 1.8e-51, 37.21% id in 524 aa; methyl-accepting chemotaxis protein 4073530 2885610 ECA3624 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_051712.1 4071959 D 218491 CDS YP_051713.1 50122546 2885611 4074061..4075893 1 NC_004547.2 Similar to Agrobacterium tumefaciens McpA SWALL:O68016 (EMBL:AF010180) (579 aa) fasta scores: E(): 1.9e-31, 36.54% id in 249 aa, and to Xanthomonas axonopodis chemotaxis protein mcpa or xac1746 SWALL:Q8PLP7 (EMBL:AE011806) (684 aa) fasta scores: E(): 1.3e-35, 36.56% id in 268 aa; hypothetical protein 4075893 2885611 ECA3625 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051713.1 4074061 D 218491 CDS YP_051714.1 50122547 2885548 complement(4075862..4076878) 1 NC_004547.2 Similar to Escherichia coli hypothetical protein yggr or b2950 SWALL:YGGR_ECOLI (SWALL:P52052) (326 aa) fasta scores: E(): 4e-63, 60.67% id in 328 aa, and to Yersinia pestis hypothetical protein Ypo0940 SWALL:Q8ZHF9 (EMBL:AJ414145) (358 aa) fasta scores: E(): 1.4e-65, 60.92% id in 325 aa; type II/IV secretion system protein 4076878 2885548 ECA3626 Pectobacterium atrosepticum SCRI1043 type II/IV secretion system protein YP_051714.1 4075862 R 218491 CDS YP_051715.1 50122548 2885549 4076900..4077613 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo0941 SWALL:Q8ZHF8 (EMBL:AJ414145) (232 aa) fasta scores: E(): 3.2e-62, 72.65% id in 234 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical upf0001 protein yggs or b2951 or c3537 or z4296 or ecs3826 SWALL:YGGS_ECOLI (SWALL:P52054) (234 aa) fasta scores: E(): 2.5e-61, 71.67% id in 233 aa; alanine racemase 4077613 2885549 ECA3627 Pectobacterium atrosepticum SCRI1043 alanine racemase YP_051715.1 4076900 D 218491 CDS YP_051716.1 50122549 2885408 4077711..4078532 1 NC_004547.2 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 4078532 proC 2885408 proC Pectobacterium atrosepticum SCRI1043 pyrroline-5-carboxylate reductase YP_051716.1 4077711 D 218491 CDS YP_051717.1 50122550 2885550 4078582..4079136 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo0943 or y3329 SWALL:Q8ZHF6 (EMBL:AJ414145) (184 aa) fasta scores: E(): 5.8e-58, 78.26% id in 184 aa, and to Vibrio cholerae hypothetical protein Vc0459 SWALL:Q9KUQ6 (EMBL:AE004132) (185 aa) fasta scores: E(): 2.3e-42, 56.21% id in 185 aa; hypothetical protein 4079136 2885550 ECA3629 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051717.1 4078582 D 218491 CDS YP_051718.1 50122551 2885551 4079133..4079423 1 NC_004547.2 Similar to Salmonella typhi hypothetical upf0235 protein yggu or sty3255 or t3014 SWALL:AAO70566 (EMBL:AL627277) (96 aa) fasta scores: E(): 1.1e-27, 78.12% id in 96 aa, and to Escherichia coli hypothetical upf0235 protein yggu or b2953 SWALL:YGGU_ECOLI (SWALL:P52060) (96 aa) fasta scores: E(): 2.6e-26, 76.84% id in 95 aa; hypothetical protein 4079423 2885551 ECA3630 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051718.1 4079133 D 218491 CDS YP_051719.1 50122552 2882835 4079441..4080034 1 NC_004547.2 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; deoxyribonucleotide triphosphate pyrophosphatase 4080034 2882835 ECA3631 Pectobacterium atrosepticum SCRI1043 deoxyribonucleotide triphosphate pyrophosphatase YP_051719.1 4079441 D 218491 CDS YP_051720.1 50122553 2882836 4080027..4081166 1 NC_004547.2 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 4081166 2882836 ECA3632 Pectobacterium atrosepticum SCRI1043 coproporphyrinogen III oxidase YP_051720.1 4080027 D 218491 CDS YP_051721.1 50122554 2882837 4081395..4081658 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty3093 SWALL:Q8Z448 (EMBL:AL627276) (118 aa) fasta scores: E(): 4.3e-20, 75.94% id in 79 aa, and to Vibrio cholerae hypothetical protein Vca0360.1 SWALL:YV6A_VIBCH (SWALL:P58093) (80 aa) fasta scores: E(): 1.5e-05, 42.85% id in 77 aa; hypothetical protein 4081658 2882837 ECA3633 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051721.1 4081395 D 218491 CDS YP_051722.1 50122555 2882713 complement(4081912..4082829) 1 NC_004547.2 Similar to Brucella melitensis transcriptional regulatory protein, LysR family bmeii1135 SWALL:Q8YAW6 (EMBL:AE009745) (297 aa) fasta scores: E(): 5.1e-26, 30.66% id in 287 aa, and to Rhizobium meliloti transcription regulator protein r02876 or smc02984 SWALL:Q92LY6 (EMBL:AL591792) (297 aa) fasta scores: E(): 2.4e-28, 33.33% id in 288 aa; LysR family transcriptional regulator 4082829 2882713 ECA3634 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_051722.1 4081912 R 218491 CDS YP_051723.1 50122556 2882714 4082924..4084141 1 NC_004547.2 Similar to Azotobacter vinelandii AvxA SWALL:Q8KY99 (EMBL:AF238500) (407 aa) fasta scores: E(): 2.7e-19, 26.28% id in 388 aa, and to Aeromonas hydrophila multidrug-resistance protein SWALL:Q9LAA0 (EMBL:AF146029) (409 aa) fasta scores: E(): 4.7e-19, 26.98% id in 404 aa; hypothetical protein 4084141 2882714 ECA3635 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051723.1 4082924 D 218491 CDS YP_051724.1 50122557 2882715 4084384..4084998 1 NC_004547.2 Similar to Proteus vulgaris hypothetical protein orf158 SWALL:Q8KK19 (EMBL:AP004237) (205 aa) fasta scores: E(): 1.4e-44, 59.02% id in 205 aa; hypothetical protein 4084998 2882715 ECA3636 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051724.1 4084384 D 218491 CDS YP_051725.1 50122558 2882716 complement(4085438..4085824) 1 NC_004547.2 Similar to Streptococcus thermophilus bacteriophage TP-J34 host cell surface-exposed lipoprotein SWALL:O48388 (EMBL:AF020798) (142 aa) fasta scores: E(): 5.6, 22.9% id in 131 aa; host cell surface-exposed lipoprotein 4085824 2882716 ECA3637 Pectobacterium atrosepticum SCRI1043 host cell surface-exposed lipoprotein YP_051725.1 4085438 R 218491 CDS YP_051726.1 50122559 2881453 4086196..4086327 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 entericidin a precursor EcnA or b4147.1 or c5234 or z5753 or ecs5128.1 SWALL:ECNA_ECOLI (SWALL:P56548) (41 aa) fasta scores: E(): 4e-07, 58.14% id in 43 aa; entericidin A 4086327 ecnA 2881453 ecnA Pectobacterium atrosepticum SCRI1043 entericidin A YP_051726.1 4086196 D 218491 CDS YP_051727.1 50122560 2882771 complement(4086421..4086876) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi acyltransferase ElaA or stm2312 or sty2543 SWALL:Q8XG97 (EMBL:AE008803) (153 aa) fasta scores: E(): 1.5e-28, 54.54% id in 143 aa, and to Escherichia coli, and Shigella flexneri protein ElaA or b2267 or sf2346 SWALL:ELAA_ECOLI (SWALL:P52077) (153 aa) fasta scores: E(): 1.5e-27, 51.74% id in 143 aa; acyltransferase 4086876 2882771 ECA3639 Pectobacterium atrosepticum SCRI1043 acyltransferase YP_051727.1 4086421 R 218491 CDS YP_051728.1 50122561 2882772 complement(4086889..4088112) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo0792 or y3180 SWALL:Q8ZHU2 (EMBL:AJ414144) (406 aa) fasta scores: E(): 8.3e-111, 76.72% id in 391 aa, and to Salmonella typhimurium efflux protein, resistance protein yged or stm3009 SWALL:Q8ZMA5 (EMBL:AE008838) (400 aa) fasta scores: E(): 2e-108, 75.31% id in 401 aa; lysophospholipid transporter LplT 4088112 2882772 ECA3640 Pectobacterium atrosepticum SCRI1043 lysophospholipid transporter LplT YP_051728.1 4086889 R 218491 CDS YP_051729.1 50122562 2885271 complement(4088109..4090325) 1 NC_004547.2 Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase 4090325 aas 2885271 aas Pectobacterium atrosepticum SCRI1043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase YP_051729.1 4088109 R 218491 CDS YP_051730.1 50122563 2882773 4090959..4092614 1 NC_004547.2 Similar to Rahnella aquatilis methyl-accepting chemotaxis protein I SWALL:Q93ET6 (EMBL:AF338038) (554 aa) fasta scores: E(): 7.3e-64, 42.31% id in 553 aa, and to Salmonella typhimurium methyl-accepting chemotaxis protein II Tar or CheM or stm1919 SWALL:MCP2_SALTY (SWALL:P02941) (553 aa) fasta scores: E(): 4.3e-56, 41.27% id in 550 aa; methyl-accepting chemotaxis protein 4092614 2882773 ECA3642 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_051730.1 4090959 D 218491 CDS YP_051731.1 50122564 2882741 complement(4093013..4093480) 1 NC_004547.2 Similar to Shewanella oneidensis acetyltransferase, GnaT family so4489 SWALL:AAN57454 (EMBL:AE015881) (154 aa) fasta scores: E(): 3.8e-09, 28.28% id in 152 aa, and to Agrobacterium tumefaciens hypothetical protein atu2342 or agr_c_4255 SWALL:Q8UCY6 (EMBL:AE009183) (171 aa) fasta scores: E(): 4.2e-08, 30.88% id in 136 aa; GnaT-family acetyltransferase 4093480 2882741 ECA3643 Pectobacterium atrosepticum SCRI1043 GnaT-family acetyltransferase YP_051731.1 4093013 R 218491 CDS YP_051732.1 50122565 2882742 complement(4093483..4094250) 1 NC_004547.2 Similar to Escherichia coli uxu operon transcriptional regulator UxuR or b4324 SWALL:UXUR_ECOLI (SWALL:P39161) (257 aa) fasta scores: E(): 3.4e-39, 48.58% id in 247 aa, and to Yersinia pestis transcriptional regulatory protein ypo1279 or uxur or y2904 SWALL:Q8ZGL0 (EMBL:AJ414147) (266 aa) fasta scores: E(): 3.5e-46, 51.98% id in 252 aa; GntR family transcriptional regulator 4094250 2882742 ECA3644 Pectobacterium atrosepticum SCRI1043 GntR family transcriptional regulator YP_051732.1 4093483 R 218491 CDS YP_051733.1 50122566 2882743 complement(4094469..4094786) 1 NC_004547.2 Similar to Bacillus subtilis PTS system, lichenan-specific IIb component LicB or CelA SWALL:PTCB_BACSU (SWALL:P46318) (102 aa) fasta scores: E(): 2.9e-11, 46% id in 100 aa; PTS system lichenan-specific transporter subunit IIB 4094786 2882743 ECA3645 Pectobacterium atrosepticum SCRI1043 PTS system lichenan-specific transporter subunit IIB YP_051733.1 4094469 R 218491 CDS YP_051734.1 50122567 2882540 complement(4094816..4096252) 1 NC_004547.2 Similar to Bacillus pumilus 6-phospho-beta-glucosidase CelH SWALL:Q8KP27 (EMBL:AY124778) (466 aa) fasta scores: E(): 5.1e-82, 42.98% id in 463 aa; 6-phospho-beta-glucosidase 4096252 celH 2882540 celH Pectobacterium atrosepticum SCRI1043 6-phospho-beta-glucosidase YP_051734.1 4094816 R 218491 CDS YP_051735.1 50122568 2883215 complement(4096277..4097614) 1 NC_004547.2 Similar to Bacillus subtilis PTS system, lichenan-specific IIc component LicC or CelB SWALL:PTCC_BACSU (SWALL:P46317) (452 aa) fasta scores: E(): 3.3e-46, 33.7% id in 448 aa; PTS system lichenan-specific transporter subunit IIC 4097614 licC 2883215 licC Pectobacterium atrosepticum SCRI1043 PTS system lichenan-specific transporter subunit IIC YP_051735.1 4096277 R 218491 CDS YP_051736.1 50122569 2882875 4097901..4098245 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri PTS system, cellobiose-specific IIa component CelC or b1736 or c2135 or z2766 or ecs2442 or sf1490 SWALL:PTCA_ECOLI (SWALL:P17335) (116 aa) fasta scores: E(): 6.3e-14, 43.86% id in 114 aa; PTS system cellobiose-specific transporter subunit IIA 4098245 2882875 ECA3648 Pectobacterium atrosepticum SCRI1043 PTS system cellobiose-specific transporter subunit IIA YP_051736.1 4097901 D 218491 CDS YP_051737.1 50122570 2882876 4098379..4099404 1 NC_004547.2 Similar to Escherichia coli cryptic asc operon repressor AscG or b2714 SWALL:ASCG_ECOLI (SWALL:P24242) (336 aa) fasta scores: E(): 1.1e-52, 46.22% id in 331 aa; transcriptional repressor 4099404 2882876 ECA3649 Pectobacterium atrosepticum SCRI1043 transcriptional repressor YP_051737.1 4098379 D 218491 CDS YP_051738.1 50122571 2882877 complement(4099428..4099982) 1 NC_004547.2 Similar to Salmonella typhi DNA-binding protein sty3832 SWALL:Q8Z2V1 (EMBL:AL627279) (188 aa) fasta scores: E(): 2.3e-32, 53.37% id in 178 aa, and to Agrobacterium tumefaciens Tiorf88 protein tiorf88 SWALL:Q9R6H1 (EMBL:AB016260) (163 aa) fasta scores: E(): 1e-21, 42.5% id in 160 aa; DNA-binding protein 4099982 2882877 ECA3650 Pectobacterium atrosepticum SCRI1043 DNA-binding protein YP_051738.1 4099428 R 218491 CDS YP_051739.1 50122572 2882878 4100167..4101123 1 NC_004547.2 Similar to Rhizobium loti hypothetical protein Mlr3911 SWALL:Q98F65 (EMBL:AP003003) (301 aa) fasta scores: E(): 5.7e-63, 58.68% id in 288 aa, and to Pseudomonas putida membrane protein, pp4307 SWALL:AAN69887 (EMBL:AE016790) (307 aa) fasta scores: E(): 2.2e-59, 54.86% id in 288 aa; hypothetical protein 4101123 2882878 ECA3651 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051739.1 4100167 D 218491 CDS YP_051740.1 50122573 2882263 complement(4101120..4102382) 1 NC_004547.2 catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding; diaminopimelate decarboxylase 4102382 lysA 2882263 lysA Pectobacterium atrosepticum SCRI1043 diaminopimelate decarboxylase YP_051740.1 4101120 R 218491 CDS YP_051741.1 50122574 2882301 4102518..4103441 1 NC_004547.2 activates the transcription of the lysA gene encoding diaminopimelate decarboxylase; LysR family transcriptional regulator 4103441 lysR 2882301 lysR Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_051741.1 4102518 D 218491 CDS YP_051742.1 50122575 2885498 complement(4103468..4104376) 1 NC_004547.2 Similar to Yersinia pestis LysR-family transcriptional regulatory protein ypo0799 or y3187 SWALL:Q8ZHT5 (EMBL:AJ414144) (302 aa) fasta scores: E(): 3e-85, 71.38% id in 297 aa, and to Pseudomonas aeruginosa probable transcriptional regulator pa0056 SWALL:Q9I776 (EMBL:AE004445) (306 aa) fasta scores: E(): 5e-70, 61.27% id in 297 aa; LysR family transcriptional regulator 4104376 2885498 ECA3654 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_051742.1 4103468 R 218491 CDS YP_051743.1 50122576 2885499 4104484..4105365 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo0800 SWALL:Q8ZHT4 (EMBL:AJ414144) (295 aa) fasta scores: E(): 1.1e-70, 64.84% id in 293 aa, and to Shewanella oneidensis metallo-beta-lactamase family protein so3474 SWALL:AAN56467 (EMBL:AE015783) (299 aa) fasta scores: E(): 4.7e-56, 52.06% id in 290 aa; hypothetical protein 4105365 2885499 ECA3655 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051743.1 4104484 D 218491 CDS YP_051744.1 50122577 2885500 4105353..4106009 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo0801 or y3189 SWALL:Q8ZHT3 (EMBL:AJ414144) (211 aa) fasta scores: E(): 9.3e-45, 55.23% id in 210 aa, and to Ralstonia solanacearum hypothetical protein rsc1444 or rs03863 SWALL:Q8XZF7 (EMBL:AL646064) (242 aa) fasta scores: E(): 1e-44, 52.29% id in 218 aa; hypothetical protein 4106009 2885500 ECA3656 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051744.1 4105353 D 218491 CDS YP_051745.1 50122578 2882344 4106203..4106496 1 NC_004547.2 hypothetical protein 4106496 2882344 ECA3657 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051745.1 4106203 D 218491 CDS YP_051746.1 50122579 2882345 4106532..4107239 1 NC_004547.2 hypothetical protein 4107239 2882345 ECA3658 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051746.1 4106532 D 218491 CDS YP_051747.1 50122580 2882346 4107617..4109308 1 NC_004547.2 Similar to Escherichia coli O6 conserved hypothetical protein c5426 SWALL:Q8FA84 (EMBL:AE016772) (557 aa) fasta scores: E(): 3.9e-29, 25.84% id in 565 aa, and to Bifidobacterium longum hypothetical protein bl1400 SWALL:Q8G4I2 (EMBL:AE014770) (701 aa) fasta scores: E(): 5.8e-31, 28.45% id in 594 aa; hypothetical protein 4109308 2882346 ECA3659 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051747.1 4107617 D 218491 CDS YP_051748.1 50122581 2882347 4109655..4110677 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty4439 SWALL:Q8Z1T1 (EMBL:AL627282) (332 aa) fasta scores: E(): 1.2e-105, 79.26% id in 328 aa, and to Escherichia coli O6 hypothetical protein yjbn or c5018 SWALL:AAN83444 (EMBL:AE016770) (331 aa) fasta scores: E(): 3.8e-105, 82.22% id in 315 aa; tRNA-dihydrouridine synthase A 4110677 2882347 ECA3660 Pectobacterium atrosepticum SCRI1043 tRNA-dihydrouridine synthase A YP_051748.1 4109655 D 218491 CDS YP_051749.1 50122582 2882417 4110844..4111116 1 NC_004547.2 coordinately regulated along with pspA; PspF-dependent induction in response to secretin overexpression in Yersinia; phage shock protein G 4111116 pspG 2882417 pspG Pectobacterium atrosepticum SCRI1043 phage shock protein G YP_051749.1 4110844 D 218491 CDS YP_051750.1 50122583 2882418 complement(4111564..4112952) 1 NC_004547.2 Similar to Bacillus halodurans cytochrome P450 hydroxylase bh0579 SWALL:Q9KFA6 (EMBL:AP001509) (453 aa) fasta scores: E(): 2.2e-24, 26.19% id in 462 aa, and to Vicia sativa cytochrome P450 94a1 cyp94a1 or vagh111 SWALL:C941_VICSA (SWALL:O81117) (514 aa) fasta scores: E(): 2.2e-23, 25.88% id in 483 aa; cytochrome 4112952 2882418 ECA3662 Pectobacterium atrosepticum SCRI1043 cytochrome YP_051750.1 4111564 R 218491 CDS YP_051751.1 50122584 2882686 complement(4113273..4114259) 1 NC_004547.2 Similar to Escherichia coli quinone oxidoreductase Qor or Hcz or b4051 SWALL:QOR_ECOLI (SWALL:P28304) (327 aa) fasta scores: E(): 3.6e-91, 75.22% id in 327 aa; quinone oxidoreductase 4114259 qor 2882686 qor Pectobacterium atrosepticum SCRI1043 quinone oxidoreductase YP_051751.1 4113273 R 218491 CDS YP_051752.1 50122585 2882800 4114440..4115846 1 NC_004547.2 unwinds double stranded DNA; replicative DNA helicase 4115846 dnaB 2882800 dnaB Pectobacterium atrosepticum SCRI1043 replicative DNA helicase YP_051752.1 4114440 D 218491 CDS YP_051753.1 50122586 2884196 4115888..4116970 1 NC_004547.2 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 4116970 alr 2884196 alr Pectobacterium atrosepticum SCRI1043 alanine racemase YP_051753.1 4115888 D 218491 CDS YP_051754.1 50122587 2882419 4116963..4117631 1 NC_004547.2 hypothetical protein 4117631 2882419 ECA3666 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051754.1 4116963 D 218491 CDS YP_051755.1 50122588 2883120 4117795..4118124 1 NC_004547.2 Similar to Xylella fastidiosa hypothetical protein Xf0898 xf0898 SWALL:Q9PEY0 (EMBL:AE003929) (117 aa) fasta scores: E(): 2.8e-07, 38.46% id in 91 aa, and to Pectobacterium carotovorum subsp. carotovorum outer membrane lipoprotein Pcp SWALL:Q9RB08 (EMBL:AF168687) (155 aa) fasta scores: E(): 1.8, 29.78% id in 94 aa; lipoprotein 4118124 2883120 ECA3667 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_051755.1 4117795 D 218491 CDS YP_051756.1 50122589 2883121 4118250..4118720 1 NC_004547.2 Similar to Bradyrhizobium japonicum transcriptional regulatory protein blr0340 SWALL:BAC45605 (EMBL:AP005936) (167 aa) fasta scores: E(): 1.4e-26, 52.02% id in 148 aa, and to Rhizobium meliloti transcription regulator protein r02941 or smc03210 SWALL:Q92LT2 (EMBL:AL591792) (159 aa) fasta scores: E(): 1.6e-20, 45.16% id in 155 aa; transcriptional regulator AsnC 4118720 2883121 ECA3668 Pectobacterium atrosepticum SCRI1043 transcriptional regulator AsnC YP_051756.1 4118250 D 218491 CDS YP_051757.1 50122590 2883122 4118940..4119590 1 NC_004547.2 Similar to Brucella melitensis hypothetical membrane spanning protein Bmei1312 SWALL:Q8YG50 (EMBL:AE009569) (217 aa) fasta scores: E(): 6.6e-41, 52.21% id in 203 aa, and to Vibrio vulnificus uncharacterized conserved protein vv21211 SWALL:AAO08108 (EMBL:AE016812) (202 aa) fasta scores: E(): 2.5e-37, 54.92% id in 193 aa; hypothetical protein 4119590 2883122 ECA3669 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051757.1 4118940 D 218491 CDS YP_051758.1 50122591 2884224 4119655..4120848 1 NC_004547.2 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; aromatic amino acid aminotransferase 4120848 tyrB 2884224 tyrB Pectobacterium atrosepticum SCRI1043 aromatic amino acid aminotransferase YP_051758.1 4119655 D 218491 CDS YP_051759.1 50122592 2882618 4121033..4121530 1 NC_004547.2 Similar to Pseudomonas putida conserved hypothetical protein pp4958 SWALL:AAN70525 (EMBL:AE016792) (179 aa) fasta scores: E(): 4.7e-39, 59.25% id in 162 aa, and to Escherichia coli hypothetical protein ygjp or b3085 SWALL:YGJP_ECOLI (SWALL:P42597) (179 aa) fasta scores: E(): 2.5e-38, 61.14% id in 157 aa; hypothetical protein 4121530 2882618 ECA3671 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051759.1 4121033 D 218491 CDS YP_051760.1 50122593 2882619 4121651..4122130 1 NC_004547.2 Similar to Escherichia coli O6 conserved hypothetical protein c3767 SWALL:AAN82211 (EMBL:AE016766) (159 aa) fasta scores: E(): 1.4e-29, 51.28% id in 156 aa, and to Yersinia pestis membrane protein ypo2793 or y1136 SWALL:AAM84714 (EMBL:AJ414153) (190 aa) fasta scores: E(): 3.7e-51, 79.48% id in 156 aa; hypothetical protein 4122130 2882619 ECA3672 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051760.1 4121651 D 218491 CDS YP_051761.1 50122594 2882620 complement(4122179..4122517) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo2790 SWALL:Q8ZD08 (EMBL:AJ414153) (133 aa) fasta scores: E(): 3.7e-26, 68.62% id in 102 aa; hypothetical protein 4122517 2882620 ECA3673 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051761.1 4122179 R 218491 CDS YP_051762.1 50122595 2882621 complement(4122637..4123044) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo2790 SWALL:Q8ZD08 (EMBL:AJ414153) (133 aa) fasta scores: E(): 5e-30, 57.57% id in 132 aa; hypothetical protein 4123044 2882621 ECA3674 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051762.1 4122637 R 218491 CDS YP_051763.1 50122596 2882052 complement(4123037..4123897) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2788 or y1139 SWALL:Q8ZD09 (EMBL:AJ414153) (193 aa) fasta scores: E(): 5.5e-56, 73.95% id in 192 aa; hypothetical protein 4123897 2882052 ECA3675 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051763.1 4123037 R 218491 CDS YP_051764.1 50122597 2882053 4124255..4124668 1 NC_004547.2 Similar to Vibrio metschnikovii Orfc273-4 orfc273-4 SWALL:Q8GNE0 (EMBL:AF530480) (111 aa) fasta scores: E(): 1.9e-14, 51.37% id in 109 aa; hypothetical protein 4124668 2882053 ECA3676 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051764.1 4124255 D 218491 CDS YP_051765.1 50122598 2882054 4125449..4125685 1 NC_004547.2 Similar to Vibrio metschnikovii Orfc273-4 orfc273-4 SWALL:AAN33037 (EMBL:AF530480) (111 aa) fasta scores: E(): 1.2e-07, 51.42% id in 70 aa; hypothetical protein 4125685 2882054 ECA3677 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051765.1 4125449 D 218491 CDS YP_051766.1 50122599 2881315 complement(4125836..4126090) 1 NC_004547.2 hypothetical protein 4126090 2881315 ECA3678 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051766.1 4125836 R 218491 CDS YP_051767.1 50122600 2881316 4126156..4127136 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo2468 SWALL:Q8ZDT8 (EMBL:AJ414152) (328 aa) fasta scores: E(): 8.6e-104, 76.38% id in 326 aa, and to Pasteurella multocida hypothetical protein Pm0311 SWALL:Q9CNW2 (EMBL:AE006067) (326 aa) fasta scores: E(): 1.4e-73, 59.93% id in 312 aa; hypothetical protein 4127136 2881316 ECA3679 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051767.1 4126156 D 218491 CDS YP_051768.1 50122601 2881317 4127133..4130429 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2467 or y1723 SWALL:Q8ZDT9 (EMBL:AJ414152) (1095 aa) fasta scores: E(): 0, 59.17% id in 1112 aa, and to Pasteurella multocida hypothetical protein Pm0312 SWALL:Q9CNW1 (EMBL:AE006067) (1106 aa) fasta scores: E(): 2.7e-158, 40.62% id in 1125 aa; hypothetical protein 4130429 2881317 ECA3680 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051768.1 4127133 D 218491 CDS YP_051769.1 50122602 2881318 4130795..4132126 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2465 or y1724 SWALL:Q8ZDU1 (EMBL:AJ414152) (448 aa) fasta scores: E(): 1.1e-79, 51.14% id in 438 aa, and to Pasteurella multocida hypothetical protein Pm0305 SWALL:Q9CNW8 (EMBL:AE006066) (444 aa) fasta scores: E(): 2.2e-20, 28.25% id in 446 aa; hypothetical protein 4132126 2881318 ECA3681 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051769.1 4130795 D 218491 CDS YP_051770.1 50122603 2881828 4132123..4133055 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2464 or y1725 SWALL:Q8ZDU2 (EMBL:AJ414152) (316 aa) fasta scores: E(): 3.2e-72, 62.91% id in 302 aa, and to Pasteurella multocida hypothetical protein Pm0306 SWALL:Q9CNW7 (EMBL:AE006066) (327 aa) fasta scores: E(): 7.8e-11, 32.4% id in 324 aa; hypothetical protein 4133055 2881828 ECA3682 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051770.1 4132123 D 218491 CDS YP_051771.1 50122604 2881829 4133069..4134082 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2463 or y1726 SWALL:Q8ZDU3 (EMBL:AJ414152) (334 aa) fasta scores: E(): 2.1e-96, 74.63% id in 339 aa, and to Pasteurella multocida hypothetical protein Pm0307 SWALL:Q9CNW6 (EMBL:AE006066) (335 aa) fasta scores: E(): 9.6e-63, 53.73% id in 335 aa; hypothetical protein 4134082 2881829 ECA3683 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051771.1 4133069 D 218491 CDS YP_051772.1 50122605 2881830 4134092..4134646 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo2462 or y1727 SWALL:Q8ZDU4 (EMBL:AJ414152) (184 aa) fasta scores: E(): 4.7e-43, 60.32% id in 184 aa, and to Pasteurella multocida hypothetical protein Pm0308 SWALL:Q9CNW5 (EMBL:AE006066) (186 aa) fasta scores: E(): 1.8e-11, 29.94% id in 187 aa; hypothetical protein 4134646 2881830 ECA3684 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051772.1 4134092 D 218491 CDS YP_051773.1 50122606 2882603 complement(4134672..4134926) 1 NC_004547.2 Similar to Vibrio metschnikovii Orfc273-4 orfc273-4 SWALL:AAN33037 (EMBL:AF530480) (111 aa) fasta scores: E(): 0.039, 49.02% id in 51 aa, and to Escherichia coli O6 hypothetical protein c1020 SWALL:AAN79492 (EMBL:AE016758) (130 aa) fasta scores: E(): 0.34, 36.61% id in 71 aa; hypothetical protein 4134926 2882603 ECA3685 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051773.1 4134672 R 218491 CDS YP_051774.1 50122607 2881439 complement(4135032..4135448) 1 NC_004547.2 Similar to Salmonella typhimurium McK protein SWALL:Q8L237 (EMBL:AP005147) (138 aa) fasta scores: E(): 1.3e-40, 76.81% id in 138 aa, and to Salmonella typhimurium nucleic acid-binding protein, contains pin domain stm3033 SWALL:Q8ZM86 (EMBL:AE008839) (132 aa) fasta scores: E(): 2.6e-16, 42.42% id in 132 aa; plasmid-like protein 4135448 mcK 2881439 mcK Pectobacterium atrosepticum SCRI1043 plasmid-like protein YP_051774.1 4135032 R 218491 CDS YP_051775.1 50122608 2882786 complement(4135445..4135672) 1 NC_004547.2 Similar to Salmonella dublin virulence-associated protein VagC SWALL:VAGC_SALDU (SWALL:Q05459) (76 aa) fasta scores: E(): 3.8e-22, 77.63% id in 76 aa, and to Salmonella typhimurium Kor protein Kor SWALL:Q8L236 (EMBL:AP005147) (76 aa) fasta scores: E(): 6.3e-22, 76.31% id in 76 aa.; plasmid-associated protein 4135672 vagC 2882786 vagC Pectobacterium atrosepticum SCRI1043 plasmid-associated protein YP_051775.1 4135445 R 218491 CDS YP_051776.1 50122609 2882604 complement(4136630..4137049) 1 NC_004547.2 Similar to Vibrio cholerae hypothetical protein Vc0373 SWALL:Q9KUY5 (EMBL:AE004125) (139 aa) fasta scores: E(): 4e-37, 64.02% id in 139 aa, and to Pseudomonas stutzeri pa5286-like protein SWALL:Q8RPA9 (EMBL:AF414717) (141 aa) fasta scores: E(): 2.1e-34, 60.87% id in 138 aa; hypothetical protein 4137049 2882604 ECA3688 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051776.1 4136630 R 218491 CDS YP_051777.1 50122610 2882959 complement(4137067..4139901) 1 NC_004547.2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 4139901 uvrA 2882959 uvrA Pectobacterium atrosepticum SCRI1043 excinuclease ABC subunit A YP_051777.1 4137067 R 218491 CDS YP_051778.1 50122611 2884351 4140147..4140710 1 NC_004547.2 binds to single stranded DNA and PriA helcase facilitate replication restart; single-stranded DNA-binding protein 4140710 ssb 2884351 ssb Pectobacterium atrosepticum SCRI1043 single-stranded DNA-binding protein YP_051778.1 4140147 D 218491 CDS YP_051779.1 50122612 2882605 4141061..4142812 1 NC_004547.2 Similar to Ralstonia solanacearum probable signal peptide protein rsp1459 or rs03085 SWALL:Q8XQ27 (EMBL:AL646085) (574 aa) fasta scores: E(): 3.5e-102, 49% id in 553 aa, and to Brucella suis conserved hypothetical protein bra1172 SWALL:Q8FUP8 (EMBL:AE014610) (560 aa) fasta scores: E(): 2.4e-79, 42.98% id in 549 aa; hypothetical protein 4142812 2882605 ECA3691 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051779.1 4141061 D 218491 CDS YP_051780.1 50122613 2881524 4143007..4143462 1 NC_004547.2 Similar to Pseudomonas aeruginosa probable acetyltransferase pa4166 SWALL:Q9HWL5 (EMBL:AE004833) (152 aa) fasta scores: E(): 3.5e-38, 58.62% id in 145 aa, and to Acinetobacter sp. ADP1 hypothetical 18.3 kDa protein SWALL:O24837 (EMBL:AF009672) (155 aa) fasta scores: E(): 3.5e-32, 53.79% id in 145 aa; acetyltransferase 4143462 2881524 ECA3692 Pectobacterium atrosepticum SCRI1043 acetyltransferase YP_051780.1 4143007 D 218491 CDS YP_051781.1 50122614 2881525 complement(4143714..4144145) 1 NC_004547.2 Similar to Escherichia coli O157:H7 hypothetical protein z3974 or ecs3535 SWALL:Q8X921 (EMBL:AE005496) (143 aa) fasta scores: E(): 3.2e-34, 62.67% id in 142 aa, and to Salmonella typhimurium cytoplasmic protein stm2804 SWALL:Q8ZML2 (EMBL:AE008828) (143 aa) fasta scores: E(): 1e-31, 61.26% id in 142 aa; hypothetical protein 4144145 2881525 ECA3693 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051781.1 4143714 R 218491 CDS YP_051782.1 50122615 2881526 complement(4144286..4144420) 1 NC_004547.2 Similar to the C-terminal regions of Escherichia coli PhnO protein or b4093 SWALL:PHNO_ECOLI (SWALL:P16691) (144 aa) fasta scores: E(): 1.7, 37.2% id in 43 aa, and to Streptomyces griseus regulatory protein for c-p lyase PhnO-likE SWALL:Q54244 (EMBL:D29961) (150 aa) fasta scores: E(): 0.29, 35.71% id in 42 aa; hypothetical protein 4144420 2881526 ECA3694 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051782.1 4144286 R 218491 CDS YP_051783.1 50122616 2881527 complement(4144591..4144983) 1 NC_004547.2 Similar to Bacteriophage Mu positive regulator of late transcription C SWALL:VPC_BPMU (SWALL:P06022) (140 aa) fasta scores: E(): 0.00077, 32.14% id in 112 aa and to Erwinia carotovora DNA-binding protein RdgB SWALL:RDGB_ERWCA (SWALL:Q47588) (117 aa) fasta scores: E(): 1.8e-22, 60.19% id in 103 aa, and to Salmonella typhi bacteriophage transcriptional regulator sty1591 SWALL:Q8Z6X3 (EMBL:AL627270) (129 aa) fasta scores: E(): 5.5e-35, 67.44% id in 129 aa. Also similar to ECA2437 (59.259% id. in 108 aa overlap); phage regulatory protein 4144983 2881527 ECA3695 Pectobacterium atrosepticum SCRI1043 phage regulatory protein YP_051783.1 4144591 R 218491 CDS YP_051784.1 50122617 2882591 complement(4144980..4145402) 1 NC_004547.2 Similar to Bacteriophage Mu protein gemA SWALL:VG16_BPMU (SWALL:Q38494) (183 aa) fasta scores: E(): 1.3e-16, 43.66% id in 142 aa, and to Salmonella typhi hypothetical protein Sty1592 sty1592 SWALL:Q8Z6X2 (EMBL:AL627270) (150 aa) fasta scores: E(): 2.8e-32, 64.44% id in 135 aa; phage regluatory protein 4145402 2882591 ECA3696 Pectobacterium atrosepticum SCRI1043 phage regluatory protein YP_051784.1 4144980 R 218491 CDS YP_051785.1 50122618 2882592 complement(4145380..4145580) 1 NC_004547.2 Similar to Yersinia pestis hypothetical y1850 SWALL:AAM85417 (EMBL:AE013788) (64 aa) fasta scores: E(): 4.8e-13, 58.06% id in 62 aa; hypothetical protein 4145580 2882592 ECA3697 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051785.1 4145380 R 218491 CDS YP_051786.1 50122619 2882593 complement(4145577..4146017) 1 NC_004547.2 Similar to Escherichia coli O157:H7 hypothetical protein Ecs4949 ecs4949 SWALL:Q8X340 (EMBL:AP002567) (93 aa) fasta scores: E(): 4.7e-05, 39.02% id in 82 aa; hypothetical protein 4146017 2882593 ECA3698 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051786.1 4145577 R 218491 CDS YP_051787.1 50122620 2881649 complement(4146028..4146327) 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty1598 SWALL:Q8Z6W6 (EMBL:AL627270) (100 aa) fasta scores: E(): 8.5e-17, 58.16% id in 98 aa, and to Neisseria meningitidis phosphoribosyl-ATP pyrophosphatase HisE or nma0807 SWALL:HIS2_NEIMA (SWALL:Q9JVJ9) (107 aa) fasta scores: E(): 6.2, 35.71% id in 84 aa; phage-like protein 4146327 2881649 ECA3699 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_051787.1 4146028 R 218491 CDS YP_051788.1 50122621 2881650 complement(4146418..4147026) 1 NC_004547.2 Similar to Neisseria meningitidis hypothetical protein nma1871 or rth11 SWALL:Q9JRE4 (EMBL:AL162757) (203 aa) fasta scores: E(): 7e-29, 41% id in 200 aa, and to Shewanella oneidensis conserved hypothetical protein so0648 SWALL:AAN53726 (EMBL:AE015511) (208 aa) fasta scores: E(): 1.5e-21, 33.84% id in 195 aa; phage-like protein 4147026 2881650 ECA3700 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_051788.1 4146418 R 218491 CDS YP_051789.1 50122622 2881651 complement(4147039..4147308) 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty1602 SWALL:Q8Z6W3 (EMBL:AL627270) (89 aa) fasta scores: E(): 4.7e-16, 46.59% id in 88 aa; phage-like protein 4147308 2881651 ECA3701 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_051789.1 4147039 R 218491 CDS YP_051790.1 50122623 2881652 complement(4147336..4147593) 1 NC_004547.2 phage-like protein 4147593 2881652 ECA3702 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_051790.1 4147336 R 218491 CDS YP_051791.1 50122624 2882561 complement(4147596..4148747) 1 NC_004547.2 Similar to Salmonella typhi Eha SWALL:O87649 (EMBL:AF091717) (322 aa) fasta scores: E(): 1.5e-63, 86.9% id in 229 aa, and to Vibrio cholerae Eha protein vc1798 SWALL:Q9KR48 (EMBL:AE004256) (383 aa) fasta scores: E(): 6.4e-25, 40.15% id in 386 aa; phage-like protein 4148747 2882561 ECA3703 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_051791.1 4147596 R 218491 CDS YP_051792.1 50122625 2882562 complement(4148757..4150526) 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty1604 SWALL:Q8Z6W2 (EMBL:AL627270) (589 aa) fasta scores: E(): 4.3e-189, 82% id in 589 aa, and to Vibrio cholerae hypothetical protein Vc1799 SWALL:Q9KR47 (EMBL:AE004256) (585 aa) fasta scores: E(): 1.4e-49, 33.63% id in 559 aa; phage-like protein 4150526 2882562 ECA3704 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_051792.1 4148757 R 218491 CDS YP_051793.1 50122626 2882563 complement(4150536..4151444) 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty1606 SWALL:Q8Z6W0 (EMBL:AL627270) (143 aa) fasta scores: E(): 4.2e-32, 70.62% id in 143 aa, and to Neisseria meningitidis hypothetical protein Nmb1002 SWALL:Q9JZL4 (EMBL:AE002451) (291 aa) fasta scores: E(): 2.2e-23, 34.83% id in 267 aa; phage-like protein 4151444 2882563 ECA3705 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_051793.1 4150536 R 218491 CDS YP_051794.1 50122627 2881587 complement(4151454..4151759) 1 NC_004547.2 Similar to Neisseria meningitidis hypothetical protein Nma1223 SWALL:Q9JUN2 (EMBL:AL162755) (96 aa) fasta scores: E(): 2.4e-06, 37.64% id in 85 aa, and to Brucella melitensis transcriptional regulator, IclR family bmei1717 SWALL:Q8YF10 (EMBL:AE009605) (264 aa) fasta scores: E(): 0.013, 33.76% id in 77 aa; phage-related DNA-binding protein 4151759 2881587 ECA3706 Pectobacterium atrosepticum SCRI1043 phage-related DNA-binding protein YP_051794.1 4151454 R 218491 CDS YP_051795.1 50122628 2881588 complement(4151812..4152000) 1 NC_004547.2 Similar to Neisseria meningitidis hypothetical protein Nmb1004 SWALL:Q9JZL2 (EMBL:AE002451) (81 aa) fasta scores: E(): 5.8e-07, 48.21% id in 56 aa, and to Xanthomonas campestris hypothetical protein Xcc2998 SWALL:Q8P6H1 (EMBL:AE012413) (84 aa) fasta scores: E(): 0.01, 36.06% id in 61 aa; phage-related DNA-binding protein 4152000 2881588 ECA3707 Pectobacterium atrosepticum SCRI1043 phage-related DNA-binding protein YP_051795.1 4151812 R 218491 CDS YP_051796.1 50122629 2881589 4152092..4152508 1 NC_004547.2 Similar to Ralstonia solanacearum DNA-binding repressor transcription regulator protein rsc1907 or rs03481 SWALL:Q8XY56 (EMBL:AL646067) (173 aa) fasta scores: E(): 3.9e-09, 50.6% id in 83 aa; phage-related DNA-binding protein 4152508 2881589 ECA3708 Pectobacterium atrosepticum SCRI1043 phage-related DNA-binding protein YP_051796.1 4152092 D 218491 CDS YP_051797.1 50122630 2881239 4152527..4153063 1 NC_004547.2 phage-related membrane protein 4153063 2881239 ECA3709 Pectobacterium atrosepticum SCRI1043 phage-related membrane protein YP_051797.1 4152527 D 218491 CDS YP_051798.1 50122631 2881240 4153098..4154042 1 NC_004547.2 phage-related lipoprotein 4154042 2881240 ECA3710 Pectobacterium atrosepticum SCRI1043 phage-related lipoprotein YP_051798.1 4153098 D 218491 CDS YP_051799.1 50122632 2881241 4154162..4155169 1 NC_004547.2 Similar to many proteins described as nucleoid-associated proteins e.g. Escherichia coli nucleoid-associated protein NdpA or b2186 SWALL:NDPA_ECOLI (SWALL:P33920) (334 aa) fasta scores: E(): 1.7e-18, 28.22% id in 333 aa. Also similar to many others e.g. Ralstonia oxalatica hypothetical protein SWALL:CAD61113 (EMBL:AJ536756) (340 aa) fasta scores: E(): 8.2e-41, 38.34% id in 326 aa; Similar to , and to Pseudomonas resinovorans hypothetical protein or93 SWALL:BAC41613 (EMBL:AB088420) (333 aa) fasta scores: E(): 1.9e-30, 30.12% id in 332 aa; phage-like protein 4155169 2881241 ECA3711 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_051799.1 4154162 D 218491 CDS YP_051800.1 50122633 2881242 4155172..4156353 1 NC_004547.2 Similar to Ralstonia oxalatica hypothetical protein SWALL:CAD61111 (EMBL:AJ536756) (391 aa) fasta scores: E(): 1.4e-33, 33.43% id in 332 aa; phage-related membrane protein 4156353 2881242 ECA3712 Pectobacterium atrosepticum SCRI1043 phage-related membrane protein YP_051800.1 4155172 D 218491 CDS YP_051801.1 50122634 2882493 4156501..4156845 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty1608 SWALL:Q8Z6V8 (EMBL:AL627270) (116 aa) fasta scores: E(): 3.5e-27, 76.47% id in 102 aa, and to Salmonella typhimurium inner membrane protein stm4218 SWALL:Q8ZKI7 (EMBL:AE008897) (95 aa) fasta scores: E(): 1.2e-08, 52.94% id in 102 aa; phage-related membrane protein 4156845 2882493 ECA3713 Pectobacterium atrosepticum SCRI1043 phage-related membrane protein YP_051801.1 4156501 D 218491 CDS YP_051802.1 50122635 2882494 4156848..4157495 1 NC_004547.2 Similar to Salmonella typhimurium soluble lytic murein transglycosylase stm4217 SWALL:Q8ZKI8 (EMBL:AE008897) (201 aa) fasta scores: E(): 1.9e-52, 67.56% id in 185 aa; phage-related lytic transglycosylase 4157495 2882494 ECA3714 Pectobacterium atrosepticum SCRI1043 phage-related lytic transglycosylase YP_051802.1 4156848 D 218491 CDS YP_051803.1 50122636 2882495 4157479..4158150 1 NC_004547.2 Similar to Salmonella typhi lipoprotein sty1611 SWALL:Q8Z6V5 (EMBL:AL627270) (216 aa) fasta scores: E(): 3.2e-20, 42.98% id in 228 aa; phage-related lipoprotein 4158150 2882495 ECA3715 Pectobacterium atrosepticum SCRI1043 phage-related lipoprotein YP_051803.1 4157479 D 218491 CDS YP_051804.1 50122637 2881955 4158150..4158482 1 NC_004547.2 Similar to Salmonella typhimurium inner membrane protein stm4216 SWALL:Q8ZKI9 (EMBL:AE008897) (104 aa) fasta scores: E(): 2.8e-25, 70.29% id in 101 aa, and to Salmonella typhi membrane protein sty1612 SWALL:Q8Z6V4 (EMBL:AL627270) (108 aa) fasta scores: E(): 8.4e-22, 61.11% id in 108 aa; phage-related exported protein 4158482 2881955 ECA3716 Pectobacterium atrosepticum SCRI1043 phage-related exported protein YP_051804.1 4158150 D 218491 CDS YP_051805.1 50122638 2881956 4158475..4158786 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty1613 SWALL:Q8Z6V3 (EMBL:AL627270) (103 aa) fasta scores: E(): 3.7e-38, 93.2% id in 103 aa; phage-like protein 4158786 2881956 ECA3717 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_051805.1 4158475 D 218491 CDS YP_051806.1 50122639 2881957 4158788..4159333 1 NC_004547.2 Similar to Bacteriophage Mu protein gp27 SWALL:VG27_BPMU (SWALL:Q9T1W7) (191 aa) fasta scores: E(): 0.0026, 22.87% id in 188 aa. Also similar to Salmonella typhi prophage-related protein Sty1614 SWALL:Q8Z6V2 (EMBL:AL627270) (181 aa) fasta scores: E(): 5.4e-54, 91.16% id in 181 aa; phage-like protein 4159333 2881957 ECA3718 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_051806.1 4158788 D 218491 CDS YP_051807.1 50122640 2881958 4159330..4160865 1 NC_004547.2 Similar to Bacteriophage Mu protein gp28 28 SWALL:VG28_BPMU (SWALL:Q9T1W6) (551 aa) fasta scores: E(): 9.8e-83, 47.23% id in 470 aa and Salmonella typhi hypothetical prophage related protein sty1615 SWALL:Q8Z6V1 (EMBL:AL627270) (531 aa) fasta scores: E(): 3.6e-189, 89.08% id in 513 aa; phage-like protein 4160865 2881958 ECA3719 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_051807.1 4159330 D 218491 CDS YP_051808.1 50122641 2881445 4160865..4162358 1 NC_004547.2 Similar to Bacteriophage Mu protein gp29 29 SWALL:VG29_BPMU (SWALL:Q9T1W5) (512 aa) fasta scores: E(): 1.2e-15, 26.52% id in 524 aa and to Salmonella typhi prophage related-protein Sty1616 SWALL:Q8Z6V0 (EMBL:AL627270) (498 aa) fasta scores: E(): 9.4e-146, 72.9% id in 502 aa; phage-like protein 4162358 2881445 ECA3720 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_051808.1 4160865 D 218491 CDS YP_051809.1 50122642 2881446 4162339..4163160 1 NC_004547.2 Similar to Bacteriophage Mu F protein or Gp30 SWALL:VPF_BPMU (SWALL:Q01259) (439 aa) fasta scores: E(): 1e-43, 44.65% id in 262 aa and Salmonella typhi hypothetical protein Sty1617 SWALL:Q8Z6U9 (EMBL:AL627270) (273 aa) fasta scores: E(): 9.7e-98, 80.44% id in 271 aa; phage-like protein 4163160 2881446 ECA3721 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_051809.1 4162339 D 218491 CDS YP_051810.1 50122643 2881447 4163157..4163606 1 NC_004547.2 Similar to Bacteriophage Mu g protein g or 31 SWALL:VPG_BPMU (SWALL:Q01261) (156 aa) fasta scores: E(): 0.003, 31.09% id in 164 aa and to Salmonella typhi bacteriophage protein sty1618 SWALL:Q8Z6U8 (EMBL:AL627270) (152 aa) fasta scores: E(): 1.2e-35, 71.23% id in 146 aa; phage-like protein 4163606 2881447 ECA3722 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_051810.1 4163157 D 218491 CDS YP_051811.1 50122644 2882338 4163802..4164911 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty1619 SWALL:Q8Z6U7 (EMBL:AL627270) (371 aa) fasta scores: E(): 9.8e-89, 64.67% id in 368 aa; hypothetical protein 4164911 2882338 ECA3723 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051811.1 4163802 D 218491 CDS YP_051812.1 50122645 2882339 4164948..4165883 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty1620 SWALL:Q8Z6U6 (EMBL:AL627270) (317 aa) fasta scores: E(): 1.3e-89, 75.07% id in 317 aa; hypothetical protein 4165883 2882339 ECA3724 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051812.1 4164948 D 218491 CDS YP_051813.1 50122646 2882340 4165894..4166232 1 NC_004547.2 Similar to Salmonella typhi membrane protein sty1621 SWALL:Q8Z6U5 (EMBL:AL627270) (112 aa) fasta scores: E(): 2.5e-24, 75% id in 112 aa; phage-related exported protein 4166232 2882340 ECA3725 Pectobacterium atrosepticum SCRI1043 phage-related exported protein YP_051813.1 4165894 D 218491 CDS YP_051814.1 50122647 2885514 4166235..4166681 1 NC_004547.2 Similar to Bacteriophage Mu protein Gp36 SWALL:VG36_BPMU (SWALL:Q9T1V9) (141 aa) fasta scores: E(): 0.0025, 26.02% id in 146 aa and to Salmonella typhi phage-related protein Sty1622 SWALL:Q8Z6U4 (EMBL:AL627270) (148 aa) fasta scores: E(): 4.4e-43, 75.67% id in 148 aa; phage-like protein 4166681 2885514 ECA3726 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_051814.1 4166235 D 218491 CDS YP_051815.1 50122648 2885515 4166681..4167148 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty1623 SWALL:Q8Z6U3 (EMBL:AL627270) (154 aa) fasta scores: E(): 4.2e-46, 71.42% id in 154 aa, and to Salmonella typhimurium cytoplasmic protein stm4215 SWALL:Q8ZKJ0 (EMBL:AE008897) (151 aa) fasta scores: E(): 8e-13, 32.9% id in 155 aa; hypothetical protein 4167148 2885515 ECA3727 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051815.1 4166681 D 218491 CDS YP_051816.1 50122649 2885516 4167145..4167369 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty1624 SWALL:Q8Z6U2 (EMBL:AL627270) (84 aa) fasta scores: E(): 1.7e-13, 56.79% id in 81 aa, and to Salmonella typhimurium cytoplasmic protein stm4214 SWALL:Q8ZKJ1 (EMBL:AE008897) (65 aa) fasta scores: E(): 3.9e-09, 65.21% id in 46 aa; hypothetical protein 4167369 2885516 ECA3728 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051816.1 4167145 D 218491 CDS YP_051817.1 50122650 2885517 4167359..4168786 1 NC_004547.2 Similar to Bacteriophage P2 major tail sheath protein fI SWALL:VPF1_BPP2 (SWALL:P22501) (395 aa) fasta scores: E(): 2.4e-19, 30.27% id in 403 aa and to Erwinia carotovora tail sheath protein SWALL:Q9WX99 (EMBL:AB017338) (475 aa) fasta scores: E(): 3.5e-154, 81.05% id in 475 aa; major tail sheath protein 4168786 2885517 ECA3729 Pectobacterium atrosepticum SCRI1043 major tail sheath protein YP_051817.1 4167359 D 218491 CDS YP_051818.1 50122651 2882710 4168786..4169310 1 NC_004547.2 Similar to Bacteriophage P2 major tail tube protein FII SWALL:VPF2_BPP2 (SWALL:P22502) (171 aa) fasta scores: E(): 4e-09, 28.65% id in 164 aa and to Erwinia carotovora tail core protein SWALL:Q9WXA0 (EMBL:AB017338) (174 aa) fasta scores: E(): 2.2e-60, 82.75% id in 174 aa; major tail sheath protein 4169310 2882710 ECA3730 Pectobacterium atrosepticum SCRI1043 major tail sheath protein YP_051818.1 4168786 D 218491 CDS YP_051819.1 50122652 2882711 4169317..4169517 1 NC_004547.2 Similar to Bacteriophage N15 gp56 gene 56 SWALL:O64364 (EMBL:AF064539) (67 aa) fasta scores: E(): 2.6e-10, 61.29% id in 62 aa; hypothetical protein 4169517 2882711 ECA3731 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051819.1 4169317 D 218491 CDS YP_051820.1 50122653 2882712 4169658..4169960 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein t1360 SWALL:AAO69005 (EMBL:AE016838) (111 aa) fasta scores: E(): 1.7e-20, 62.5% id in 96 aa, and to Pectobacterium carotovorum subsp. carotovorum carotovorum orf1, orf2, orf4-12 genes, bacteriocin SWALL:Q9KW60 (EMBL:AB045036) (106 aa) fasta scores: E(): 4.7e-17, 53.12% id in 96 aa; phage-like protein 4169960 2882712 ECA3731A Pectobacterium atrosepticum SCRI1043 phage-like protein YP_051820.1 4169658 D 218491 CDS YP_051821.1 50122654 2882839 4170347..4172818 1 NC_004547.2 Similar to Salmonella typhi bacteriophage protein sty1629 SWALL:Q8Z6T7 (EMBL:AL627270) (821 aa) fasta scores: E(): 1.4e-195, 66.22% id in 823 aa, and to Pectobacterium carotovorum subsp. carotovorum tail protein SWALL:Q9KW59 (EMBL:AB045036) (835 aa) fasta scores: E(): 3.9e-67, 32.94% id in 853 aa; bacteriophage tail protein (tape-measure) 4172818 2882839 ECA3732 Pectobacterium atrosepticum SCRI1043 bacteriophage tail protein (tape-measure) YP_051821.1 4170347 D 218491 CDS YP_051822.1 50122655 2882840 4172818..4173702 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum carotovorum orf1, orf2, orf4-12 genes, bacteriocin SWALL:Q9KW58 (EMBL:AB045036) (309 aa) fasta scores: E(): 1.8e-50, 53.79% id in 303 aa, and to Salmonella typhi hypothetical protein Sty1630 SWALL:Q8Z6T6 (EMBL:AL627270) (294 aa) fasta scores: E(): 1.1e-68, 65.41% id in 292 aa; phage-like protein 4173702 2882840 ECA3733 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_051822.1 4172818 D 218491 CDS YP_051823.1 50122656 2882841 4173699..4173914 1 NC_004547.2 Similar to Bacteriophage P2 tail protein x X SWALL:VPX_BPP2 (SWALL:P51772) (67 aa) fasta scores: E(): 2.1, 32.78% id in 61 aa and to Salmonella typhi bacteriophage tail fibre protein sty1631 SWALL:Q8Z6T5 (EMBL:AL627270) (71 aa) fasta scores: E(): 1.5e-19, 63.38% id in 71 aa; bacteriophage tail fiber protein 4173914 2882841 ECA3734 Pectobacterium atrosepticum SCRI1043 bacteriophage tail fiber protein YP_051823.1 4173699 D 218491 CDS YP_051824.1 50122657 2882842 4173902..4175047 1 NC_004547.2 Similar to Bacteriophage P2 GpD SWALL:VPD_BPP2 (SWALL:P10312) (387 aa) fasta scores: E(): 7.1e-11, 24.45% id in 364 aa and to Salmonella typhi protein sty1632 SWALL:Q8Z6T4 (EMBL:AL627270) (384 aa) fasta scores: E(): 4.1e-106, 76.44% id in 382 aa; bacteriophage protein 4175047 2882842 ECA3735 Pectobacterium atrosepticum SCRI1043 bacteriophage protein YP_051824.1 4173902 D 218491 CDS YP_051825.1 50122658 2885564 4175044..4175637 1 NC_004547.2 Similar to Bacteriophage P2 baseplate assembly protein V SWALL:VPV_BPP2 (SWALL:P31340) (211 aa) fasta scores: E(): 3.6e-07, 28.27% id in 191 aa and Pectobacterium carotovorum subsp. carotovorum tail spike SWALL:Q9KW56 (EMBL:AB045036) (193 aa) fasta scores: E(): 5.4e-47, 64.46% id in 197 aa; bacteriophage baseplate protein 4175637 2885564 ECA3736 Pectobacterium atrosepticum SCRI1043 bacteriophage baseplate protein YP_051825.1 4175044 D 218491 CDS YP_051826.1 50122659 2885565 4175664..4176512 1 NC_004547.2 phage-like protein 4176512 2885565 ECA3737 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_051826.1 4175664 D 218491 CDS YP_051827.1 50122660 2885566 4176578..4176925 1 NC_004547.2 Similar to Bacteriophage P2 baseplate assembly protein w W SWALL:VPW_BPP2 (SWALL:P51768) (115 aa) fasta scores: E(): 0.0098, 36.78% id in 87 aa and Erwinia carotovora, and Pectobacterium carotovorum subsp. carotovorum baseplate SWALL:Q9WXA2 (EMBL:AB017338) (115 aa) fasta scores: E(): 7.1e-37, 75.65% id in 115 aa; bacteriophage baseplate protein 4176925 2885566 ECA3738 Pectobacterium atrosepticum SCRI1043 bacteriophage baseplate protein YP_051827.1 4176578 D 218491 CDS YP_051828.1 50122661 2881841 4176916..4178022 1 NC_004547.2 Similar to Bacteriophage P2 baseplate assembly protein J SWALL:VPJ_BPP2 (SWALL:P51767) (302 aa) fasta scores: E(): 3.7e-13, 36.89% id in 187 aa and Pectobacterium carotovorum subsp. carotovorum baseplate SWALL:Q9KW55 (EMBL:AB045036) (367 aa) fasta scores: E(): 7.3e-87, 65.39% id in 367 aa; bacteriophage baseplate assembly protein 4178022 2881841 ECA3739 Pectobacterium atrosepticum SCRI1043 bacteriophage baseplate assembly protein YP_051828.1 4176916 D 218491 CDS YP_051829.1 50122662 2881842 4178015..4178590 1 NC_004547.2 Similar to the N-terminus of Bacteriophage P2 tail protein I SWALL:VPI_BPP2 (SWALL:P26701) (176 aa) fasta scores: E(): 5.5, 29.29% id in 99 aa. Also hhighly similar to Erwinia carotovora tail fiber SWALL:Q9WXA4 (EMBL:AB017338) (182 aa) fasta scores: E(): 3.8e-31, 59.15% id in 142 aa; bacteriophage tail fiber protein 4178590 2881842 ECA3740 Pectobacterium atrosepticum SCRI1043 bacteriophage tail fiber protein YP_051829.1 4178015 D 218491 CDS YP_051830.1 50122663 2881843 4178591..4180153 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum tail fiber SWALL:Q9KW53 (EMBL:AB045036) (632 aa) fasta scores: E(): 4.4e-66, 75.76% id in 260 aa, and to Salmonella typhi bacteriophage tail fiber protein sty1637 SWALL:Q8Z6S9 (EMBL:AL627270) (341 aa) fasta scores: E(): 2.1e-29, 35.8% id in 539 aa, and to Bacteriophage HK97 tail fiber stF SWALL:Q9MCR6 (EMBL:AF069529) (321 aa) fasta scores: E(): 3.1e-27, 39.74% id in 317 aa; bacteriophage tail fiber protein 4180153 2881843 ECA3741 Pectobacterium atrosepticum SCRI1043 bacteriophage tail fiber protein YP_051830.1 4178591 D 218491 CDS YP_051831.1 50122664 2881358 4180153..4180770 1 NC_004547.2 Similar to Salmonella typhi bacteriophage tail fiber assembly protein sty1639 SWALL:Q8Z6S7 (EMBL:AL627270) (205 aa) fasta scores: E(): 1.1e-18, 38.57% id in 197 aa, and to Bacteriophage HK97 gp29 tfA SWALL:Q9MCR5 (EMBL:AF069529) (202 aa) fasta scores: E(): 8.2e-20, 38.88% id in 198 aa; bacteriophage tail fiber assembly protein 4180770 2881358 ECA3742 Pectobacterium atrosepticum SCRI1043 bacteriophage tail fiber assembly protein YP_051831.1 4180153 D 218491 CDS YP_051832.1 50122665 2881359 complement(4180822..4181157) 1 NC_004547.2 Similar to Bacillus halodurans hypothetical protein Bh1582 bh1582 SWALL:Q9KCI9 (EMBL:AP001512) (143 aa) fasta scores: E(): 7.2e-05, 32.97% id in 94 aa, and to Oceanobacillus iheyensis hypothetical conserved protein ob0311 SWALL:BAC12267 (EMBL:AP004594) (140 aa) fasta scores: E(): 0.00065, 27.95% id in 93 aa; hypothetical protein 4181157 2881359 ECA3743 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051832.1 4180822 R 218491 CDS YP_051833.1 50122666 2881360 4181249..4182667 1 NC_004547.2 Similar to Escherichia coli O157:H7 z3973 protein z3973 or ecs3534 SWALL:Q8X922 (EMBL:AE005496) (444 aa) fasta scores: E(): 1.8e-78, 47.91% id in 455 aa, and to Salmonella typhimurium regulatory protein, GntR family stm2803 SWALL:Q8ZML3 (EMBL:AE008828) (444 aa) fasta scores: E(): 5.4e-76, 47.91% id in 455 aa; GntR family transcriptional regulator 4182667 2881360 ECA3744 Pectobacterium atrosepticum SCRI1043 GntR family transcriptional regulator YP_051833.1 4181249 D 218491 CDS YP_051834.1 50122667 2881361 complement(4182708..4183757) 1 NC_004547.2 Similar to Agrobacterium tumefaciens transcriptional regulator, LacI family PurR or atu4556 or agr_l_625 SWALL:Q8U798 (EMBL:AE009383) (353 aa) fasta scores: E(): 2.3e-43, 39.23% id in 339 aa, and to Sphingomonas sp transcriptional regulator CcpA SWALL:Q9KWU0 (EMBL:AB011415) (353 aa) fasta scores: E(): 5.6e-26, 32.75% id in 345 aa; LacI family transcriptional regulator 4183757 2881361 ECA3745 Pectobacterium atrosepticum SCRI1043 LacI family transcriptional regulator YP_051834.1 4182708 R 218491 CDS YP_051835.1 50122668 2882322 complement(4183757..4184809) 1 NC_004547.2 Similar to Agrobacterium tumefaciens ABC transporter, membrane spanning protein atu4557 or agr_l_624 SWALL:Q8U797 (EMBL:AE009383) (349 aa) fasta scores: E(): 2.9e-96, 69.42% id in 350 aa, and to Thermoanaerobacter tengcongensis sugar permeases malg4 or tte1936 SWALL:Q8R8Q9 (EMBL:AE013144) (275 aa) fasta scores: E(): 1.5e-45, 39.93% id in 328 aa; ABC transporter permease 4184809 2882322 ECA3746 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_051835.1 4183757 R 218491 CDS YP_051836.1 50122669 2882323 complement(4184818..4185816) 1 NC_004547.2 Similar to Agrobacterium tumefaciens ABC transporter, membrane spanning protein atu4558 or agr_l_623 SWALL:Q8U796 (EMBL:AE009384) (352 aa) fasta scores: E(): 6.2e-82, 63.09% id in 317 aa, and to Thermoanaerobacter tengcongensis ABC-type sugar transport systems, permease components malf4 or tte1937 SWALL:Q8R8Q8 (EMBL:AE013144) (294 aa) fasta scores: E(): 5e-30, 37.62% id in 295 aa; ABC transporter permease 4185816 2882323 ECA3747 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_051836.1 4184818 R 218491 CDS YP_051837.1 50122670 2882324 complement(4185840..4186931) 1 NC_004547.2 Similar to Agrobacterium tumefaciens ABC transporter, nucleotide binding/ATPase protein atu4559 or agr_l_621 SWALL:Q8U795 (EMBL:AE009384) (368 aa) fasta scores: E(): 1e-75, 60.05% id in 363 aa, and to Rhizobium meliloti ATP-binding ABC transporter protein r00112 or smc04140 SWALL:Q92T68 (EMBL:AL591782) (360 aa) fasta scores: E(): 1.3e-69, 59.15% id in 355 aa; ABC transporter ATP-binding protein 4186931 2882324 ECA3748 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_051837.1 4185840 R 218491 CDS YP_051838.1 50122671 2885372 complement(4186934..4188040) 1 NC_004547.2 Similar to Erwinia chrysanthemi RhiN protein RhiN SWALL:CAC83616 (EMBL:AJ292045) (379 aa) fasta scores: E(): 1.8e-53, 45.01% id in 311 aa, and to Agrobacterium tumefaciens hypothetical protein atu4561 atu4561 or agr_l_618 SWALL:Q8U793 (EMBL:AE009384) (397 aa) fasta scores: E(): 4.9e-74, 53.46% id in 361 aa. Also similar to ECA3559 (RhiN) (43.810% id. in 315 aa overlap); plant-inducible protein 4188040 2885372 ECA3749 Pectobacterium atrosepticum SCRI1043 plant-inducible protein YP_051838.1 4186934 R 218491 CDS YP_051839.1 50122672 2885373 complement(4188042..4190504) 1 NC_004547.2 Similar to Agrobacterium tumefaciens hypothetical protein atu4562 or agr_l_617 SWALL:Q8U792 (EMBL:AE009384) (840 aa) fasta scores: E(): 4e-114, 38.74% id in 826 aa; hypothetical protein 4190504 2885373 ECA3750 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051839.1 4188042 R 218491 CDS YP_051840.1 50122673 2885374 4190949..4192256 1 NC_004547.2 Similar to Agrobacterium tumefaciens ABC transporter, substrate binding protein atu4564 or agr_l_615 SWALL:Q8U790 (EMBL:AE009384) (428 aa) fasta scores: E(): 2.3e-71, 45.07% id in 426 aa, and to Thermoanaerobacter tengcongensis sugar-binding periplasmic proteins/domains ugpb4 or tte1938 SWALL:Q8R8Q7 (EMBL:AE013144) (438 aa) fasta scores: E(): 7.8e-17, 24.81% id in 403 aa; extracellular solute-binding protein 4192256 2885374 ECA3751 Pectobacterium atrosepticum SCRI1043 extracellular solute-binding protein YP_051840.1 4190949 D 218491 CDS YP_051841.1 50122674 2885375 4192253..4192804 1 NC_004547.2 Similar to the C-terminal regions of several including Vibrio cholerae hypothetical protein Vc0614 vc0614 SWALL:Q9KUA9 (EMBL:AE004147) (325 aa) fasta scores: E(): 8.8e-12, 31.97% id in 147 aa, and to Vibrio vulnificus predicted N-acetylglucosamine kinase vv11667 SWALL:AAO10084 (EMBL:AE016802) (296 aa) fasta scores: E(): 9.7e-09, 27.66% id in 141 aa; hypothetical protein 4192804 2885375 ECA3752 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051841.1 4192253 D 218491 CDS YP_051842.1 50122675 2885747 4192801..4193715 1 NC_004547.2 Similar to Vibrio cholerae hypothetical protein Vc0614 SWALL:Q9KUA9 (EMBL:AE004147) (325 aa) fasta scores: E(): 2.6e-27, 40.66% id in 300 aa, and to Vibrio vulnificus predicted N-acetylglucosamine kinase vv11667 SWALL:AAO10084 (EMBL:AE016802) (296 aa) fasta scores: E(): 7.6e-29, 40.66% id in 300 aa; hypothetical protein 4193715 2885747 ECA3753 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051842.1 4192801 D 218491 CDS YP_051843.1 50122676 2885748 4193741..4195564 1 NC_004547.2 Similar to Rhizobium meliloti hypothetical protein rb0152 rb0152 or smb20152 SWALL:Q92X10 (EMBL:AL603642) (572 aa) fasta scores: E(): 9.3e-70, 36.77% id in 552 aa, and to Agrobacterium tumefaciens hypothetical protein atu4354 atu4354 or agr_l_1025 SWALL:Q8U7U5 (EMBL:AE009364) (557 aa) fasta scores: E(): 1.9e-63, 36.85% id in 521 aa; calcineurin-like phosphoesterase 4195564 2885748 ECA3754 Pectobacterium atrosepticum SCRI1043 calcineurin-like phosphoesterase YP_051843.1 4193741 D 218491 CDS YP_051844.1 50122677 2885749 4195738..4196169 1 NC_004547.2 hypothetical protein 4196169 2885749 ECA3755 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051844.1 4195738 D 218491 CDS YP_051845.1 50122678 2881404 4196148..4196876 1 NC_004547.2 Similar to Escherichia coli ABC transporter ATP-binding protein SWALL:CAD33755 (EMBL:AJ488511) (244 aa) fasta scores: E(): 1.5e-51, 65.65% id in 230 aa, and to Rhizobium loti ABC transporter, ATP-binding protein mll8315 SWALL:Q983I5 (EMBL:AP003013) (272 aa) fasta scores: E(): 8.5e-29, 45.87% id in 218 aa; ABC transporter ATP-binding protein 4196876 2881404 ECA3756 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_051845.1 4196148 D 218491 CDS YP_051846.1 50122679 2881405 4196873..4197727 1 NC_004547.2 Similar to Escherichia coli ABC transporter membrane protein SWALL:CAD33756 (EMBL:AJ488511) (284 aa) fasta scores: E(): 2e-79, 80.35% id in 280 aa, and to Neisseria meningitidis ABC-transporter membrane protein nma0790 SWALL:Q9JVL3 (EMBL:AL162754) (291 aa) fasta scores: E(): 2.8e-54, 57.14% id in 280 aa; ABC transporter membrane protein 4197727 2881405 ECA3757 Pectobacterium atrosepticum SCRI1043 ABC transporter membrane protein YP_051846.1 4196873 D 218491 CDS YP_051847.1 50122680 2881406 4197767..4198645 1 NC_004547.2 Similar to Escherichia coli periplasmic solute binding protein SWALL:CAD33757 (EMBL:AJ488511) (292 aa) fasta scores: E(): 1.2e-83, 78.42% id in 292 aa, and to Bradyrhizobium japonicum ABC transporter substrate-binding protein bll7769 SWALL:BAC53034 (EMBL:AP005963) (290 aa) fasta scores: E(): 1.7e-49, 48.09% id in 289 aa; ABC transporter substrate-binding protein 4198645 2881406 ECA3758 Pectobacterium atrosepticum SCRI1043 ABC transporter substrate-binding protein YP_051847.1 4197767 D 218491 CDS YP_051848.1 50122681 2885640 complement(4198710..4199525) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi transcriptional regulator stm0164 or sty0186 SWALL:Q8XG73 (EMBL:AE008701) (255 aa) fasta scores: E(): 6.1e-68, 72.61% id in 252 aa, and to Escherichia coli O6 transcriptional regulator c0765 SWALL:AAN79238 (EMBL:AE016757) (253 aa) fasta scores: E(): 4.6e-67, 73.96% id in 242 aa; DeoR family transcriptional regulator 4199525 2885640 ECA3759 Pectobacterium atrosepticum SCRI1043 DeoR family transcriptional regulator YP_051848.1 4198710 R 218491 CDS YP_051849.1 50122682 2885641 complement(4199670..4200650) 1 NC_004547.2 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 4200650 pdxA 2885641 pdxA Pectobacterium atrosepticum SCRI1043 4-hydroxythreonine-4-phosphate dehydrogenase YP_051849.1 4199670 R 218491 CDS YP_051850.1 50122683 2885642 complement(4200643..4201971) 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein ygbk or sty0184 SWALL:Q8Z9E4 (EMBL:AL627265) (423 aa) fasta scores: E(): 3e-41, 43.59% id in 429 aa, and to Oceanobacillus iheyensis hypothetical conserved protein ob1012 SWALL:BAC12968 (EMBL:AP004596) (431 aa) fasta scores: E(): 6.7e-31, 30.64% id in 434 aa; hypothetical protein 4201971 2885642 ECA3761 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051850.1 4200643 R 218491 CDS YP_051851.1 50122684 2885643 4202207..4203343 1 NC_004547.2 Similar to Escherichia coli O6 alcohol dehydrogenase c0762 SWALL:Q8FJW8 (EMBL:AE016757) (385 aa) fasta scores: E(): 1.1e-83, 61.96% id in 376 aa, and to Agrobacterium tumefaciens AttL SWALL:Q8VPD6 (EMBL:AY052389) (399 aa) fasta scores: E(): 4.6e-36, 35.84% id in 371 aa; alcohol dehydrogenase 4203343 2885643 ECA3762 Pectobacterium atrosepticum SCRI1043 alcohol dehydrogenase YP_051851.1 4202207 D 218491 CDS YP_051852.1 50122685 2885622 4203411..4204295 1 NC_004547.2 Similar to Bacillus subtilis dihydrodipicolinate synthase DapA SWALL:DAPA_BACSU (SWALL:Q04796) (290 aa) fasta scores: E(): 2.9e-26, 34.16% id in 281 aa, and to Escherichia coli O6 dihydrodipicolinate synthase c0761 SWALL:AAN79234 (EMBL:AE016757) (295 aa) fasta scores: E(): 1.9e-75, 67.91% id in 293 aa; dihydrodipicolinate synthase 4204295 2885622 ECA3763 Pectobacterium atrosepticum SCRI1043 dihydrodipicolinate synthase YP_051852.1 4203411 D 218491 CDS YP_051853.1 50122686 2885623 4204334..4205749 1 NC_004547.2 Similar to Pseudomonas aeruginosa probable sodium:solute symporter pa0287 SWALL:Q9I6K3 (EMBL:AE004466) (461 aa) fasta scores: E(): 4.1e-21, 23.02% id in 456 aa, and to Vibrio vulnificus na+/proline symporter vv20592 SWALL:AAO07538 (EMBL:AE016810) (492 aa) fasta scores: E(): 8.5e-19, 25.05% id in 455 aa; sodium:solute symporter 4205749 2885623 ECA3764 Pectobacterium atrosepticum SCRI1043 sodium:solute symporter YP_051853.1 4204334 D 218491 CDS YP_051854.1 50122687 2885624 4205753..4206940 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c0759 SWALL:AAN79232 (EMBL:AE016757) (389 aa) fasta scores: E(): 1.2e-112, 70.18% id in 389 aa, and to Agrobacterium tumefaciens hypothetical protein atu5072 or agr_pat_102 SWALL:Q8UKM8 (EMBL:AE008932) (397 aa) fasta scores: E(): 2.4e-68, 47.13% id in 401 aa; hypothetical protein 4206940 2885624 ECA3765 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051854.1 4205753 D 218491 CDS YP_051855.1 50122688 2885625 4207380..4207847 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c0758 SWALL:AAN79231 (EMBL:AE016757) (156 aa) fasta scores: E(): 1.5e-22, 46.45% id in 155 aa, and to Salmonella typhi hypothetical protein Sty4806 SWALL:Q8Z124 (EMBL:AL627283) (150 aa) fasta scores: E(): 7.2e-13, 37.5% id in 152 aa; hypothetical protein 4207847 2885625 ECA3766 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051855.1 4207380 D 218491 CDS YP_051856.1 50122689 2885626 4207998..4208687 1 NC_004547.2 Similar to Pseudomonas aeruginosa probable short-chain dehydrogenase pa4162 SWALL:Q9HWL9 (EMBL:AE004832) (238 aa) fasta scores: E(): 8.7e-18, 39.58% id in 240 aa, and to Bradyrhizobium japonicum Blr3403 protein blr3403 SWALL:BAC48668 (EMBL:AP005947) (242 aa) fasta scores: E(): 4.5e-18, 35.19% id in 233 aa; short-chain dehydrogenase 4208687 2885626 ECA3767 Pectobacterium atrosepticum SCRI1043 short-chain dehydrogenase YP_051856.1 4207998 D 218491 CDS YP_051857.1 50122690 2885627 4209249..4211753 1 NC_004547.2 Similar to Escherichia coli formate acetyltransferase 3 ybiw or b0823 SWALL:PFLF_ECOLI (SWALL:P75793) (810 aa) fasta scores: E(): 7.5e-46, 30.83% id in 814 aa, and to Escherichia coli hypothetical protein SWALL:CAD42073 (EMBL:AJ494981) (1140 aa) fasta scores: E(): 0, 86.97% id in 791 aa; formate acetyltransferase 4211753 2885627 ECA3768 Pectobacterium atrosepticum SCRI1043 formate acetyltransferase YP_051857.1 4209249 D 218491 CDS YP_051858.1 50122691 2885628 4211839..4212789 1 NC_004547.2 Similar to Escherichia coli pyruvate formate-lyase 3 activating enzyme ybiy or b0824 SWALL:PFLE_ECOLI (SWALL:P75794) (308 aa) fasta scores: E(): 8.9e-28, 34.65% id in 303 aa, and to Escherichia coli hypothetical protein SWALL:CAD42072 (EMBL:AJ494981) (315 aa) fasta scores: E(): 2.3e-84, 69.62% id in 316 aa; pyruvate formate-lyase activating enzyme 4212789 2885628 ECA3769 Pectobacterium atrosepticum SCRI1043 pyruvate formate-lyase activating enzyme YP_051858.1 4211839 D 218491 CDS YP_051859.1 50122692 2882685 4213115..4213531 1 NC_004547.2 Similar to Escherichia coli quaternary ammonium compound resistance protein QacH SWALL:Q9F0S6 (EMBL:AF205943) (110 aa) fasta scores: E(): 3.8e-13, 41.28% id in 109 aa; quaternary ammonium compound resistance protein 4213531 qacH 2882685 qacH Pectobacterium atrosepticum SCRI1043 quaternary ammonium compound resistance protein YP_051859.1 4213115 D 218491 CDS YP_051860.1 50122693 2884008 4213549..4213875 1 NC_004547.2 Similar to Escherichia coli EmrE protein EmrE or MvrC or Eb or b0543 SWALL:EMRE_ECOLI (SWALL:P23895) (110 aa) fasta scores: E(): 3e-13, 37.5% id in 104 aa, and to Escherichia coli hypothetical protein SWALL:CAD42067 (EMBL:AJ494981) (109 aa) fasta scores: E(): 7.6e-33, 75.22% id in 109 aa; multidrug resistance protein 4213875 2884008 ECA3771 Pectobacterium atrosepticum SCRI1043 multidrug resistance protein YP_051860.1 4213549 D 218491 CDS YP_051861.1 50122694 2884009 complement(4214035..4215231) 1 NC_004547.2 Similar to Yersinia pestis LacI-family transcriptional regulatory protein ypo2568 SWALL:Q8ZDJ4 (EMBL:AJ414152) (344 aa) fasta scores: E(): 4.7e-70, 54.46% id in 336 aa, and to Escherichia coli O6 conserved protein c0337 SWALL:AAN78825 (EMBL:AE016756) (343 aa) fasta scores: E(): 1.6e-67, 56.45% id in 310 aa; LacI family transcriptional regulator 4215231 2884009 ECA3772 Pectobacterium atrosepticum SCRI1043 LacI family transcriptional regulator YP_051861.1 4214035 R 218491 CDS YP_051862.1 50122695 2884389 4215531..4215974 1 NC_004547.2 Similar to Escherichia coli phosphotransferase enzyme iII, A component SgcA or b4302 SWALL:SGCA_ECOLI (SWALL:P39363) (143 aa) fasta scores: E(): 9.4e-18, 40% id in 135 aa, and to Yersinia pestis phosphotransferase enzyme ii, a component ypo2569 or y1618 SWALL:Q8ZDJ3 (EMBL:AJ414152) (147 aa) fasta scores: E(): 1.3e-39, 71.42% id in 147 aa; phosphotransferase enzyme II, A component 4215974 sgcA 2884389 sgcA Pectobacterium atrosepticum SCRI1043 phosphotransferase enzyme II, A component YP_051862.1 4215531 D 218491 CDS YP_051863.1 50122696 2884010 4215997..4216284 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c0335 SWALL:AAN78823 (EMBL:AE016756) (95 aa) fasta scores: E(): 3.1e-25, 84.21% id in 95 aa, and to Yersinia pestis hypothetical y1617 SWALL:AAM85186 (EMBL:AE013764) (70 aa) fasta scores: E(): 5.6e-15, 81.81% id in 66 aa; hypothetical protein 4216284 2884010 ECA3774 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051863.1 4215997 D 218491 CDS YP_051864.1 50122697 2885606 4216300..4217559 1 NC_004547.2 membrane component; functions with enzymes IIB (sgaB; ulaB) and IIA (sgaA; ulaC) enzyme I and HPr for anaerobic utilization and uptake of L-ascorbate; sgaTBA are regulated by yifQ as well as Crp and Fnr; PTS system ascorbate-specific transporter subunit IIC 4217559 ulaA 2885606 ulaA Pectobacterium atrosepticum SCRI1043 PTS system ascorbate-specific transporter subunit IIC YP_051864.1 4216300 D 218491 CDS YP_051865.1 50122698 2884526 4217612..4218277 1 NC_004547.2 similar to transaldolase from Escherichia coli; many organisms have multiple copies; fructose-6-phosphate aldolase 4218277 fsaB 2884526 fsaB Pectobacterium atrosepticum SCRI1043 fructose-6-phosphate aldolase YP_051865.1 4217612 D 218491 CDS YP_051866.1 50122699 2885607 complement(4218358..4218717) 1 NC_004547.2 Similar to Salmonella typhi hypothetical upf0231 protein yacl or sty0182 or t0165 SWALL:Q8Z9E5 (EMBL:AL627265) (120 aa) fasta scores: E(): 1.2e-33, 70.94% id in 117 aa, and to Escherichia coli O6 hypothetical upf0231 protein yacl or c0148 SWALL:AAN78642 (EMBL:AE016755) (136 aa) fasta scores: E(): 3.5e-32, 70.08% id in 117 aa; hypothetical protein 4218717 2885607 ECA3777 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051866.1 4218358 R 218491 CDS YP_051867.1 50122700 2884759 complement(4218908..4221505) 1 NC_004547.2 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 4221505 acnB 2884759 acnB Pectobacterium atrosepticum SCRI1043 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_051867.1 4218908 R 218491 CDS YP_051868.1 50122701 2885608 4221890..4222456 1 NC_004547.2 hypothetical protein 4222456 2885608 ECA3779 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051868.1 4221890 D 218491 CDS YP_051869.1 50122702 2885618 4222572..4222883 1 NC_004547.2 Similar to Pseudomonas aeruginosa transcriptional activator SWALL:AAN62123 (EMBL:AF440523) (103 aa) fasta scores: E(): 2.7e-30, 74.75% id in 103 aa, and to Salmonella typhimurium regulatory protein, ArsR family stm2797 SWALL:Q8ZML8 (EMBL:AE008827) (99 aa) fasta scores: E(): 7.5e-15, 51.57% id in 95 aa; transcriptional regulator ArsR 4222883 2885618 ECA3780 Pectobacterium atrosepticum SCRI1043 transcriptional regulator ArsR YP_051869.1 4222572 D 218491 CDS YP_051870.1 50122703 2882723 complement(4223014..4225257) 1 NC_004547.2 Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space; outer membrane receptor FepA 4225257 fepA 2882723 fepA Pectobacterium atrosepticum SCRI1043 outer membrane receptor FepA YP_051870.1 4223014 R 218491 CDS YP_051871.1 50122704 2885619 4225443..4225724 1 NC_004547.2 hypothetical protein 4225724 2885619 ECA3782 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051871.1 4225443 D 218491 CDS YP_051872.1 50122705 2885620 4225741..4226724 1 NC_004547.2 Similar to Salmonella typhi AraC-family transcriptional regulator sty0395 SWALL:Q8Z909 (EMBL:AL627266) (334 aa) fasta scores: E(): 7.3e-15, 27.68% id in 307 aa, and to Brucella suis transcriptional regulator, AraC family bra1192 SWALL:AAN34350 (EMBL:AE014611) (259 aa) fasta scores: E(): 6.2e-14, 26.33% id in 243 aa; AraC family transcriptional regulator 4226724 2885620 ECA3783 Pectobacterium atrosepticum SCRI1043 AraC family transcriptional regulator YP_051872.1 4225741 D 218491 CDS YP_051873.1 50122706 2885621 4226833..4228161 1 NC_004547.2 Similar to Agrobacterium tumefaciens hypothetical protein atu3361 or agr_l_2924 SWALL:Q8UAL2 (EMBL:AE009266) (448 aa) fasta scores: E(): 5.1e-53, 42.42% id in 462 aa, and to Bacillus subtilis hypothetical protein yxeq or lp9I SWALL:YXEQ_BACSU (SWALL:P54956) (445 aa) fasta scores: E(): 3.3e-43, 40.5% id in 400 aa; hypothetical protein 4228161 2885621 ECA3784 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051873.1 4226833 D 218491 CDS YP_051874.1 50122707 2885615 complement(4228174..4229361) 1 NC_004547.2 Similar to Yersinia pestis hypothetical y0507 SWALL:AAM84096 (EMBL:AE013652) (330 aa) fasta scores: E(): 1.1e-96, 71.96% id in 321 aa, and to Oceanobacillus iheyensis hypothetical conserved protein ob2095 SWALL:BAC14051 (EMBL:AP004600) (335 aa) fasta scores: E(): 1.8e-11, 26.58% id in 316 aa; hypothetical protein 4229361 2885615 ECA3785 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051874.1 4228174 R 218491 CDS YP_051875.1 50122708 2885616 complement(4229494..4230162) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo3693 SWALL:Q8ZAU3 (EMBL:AJ414158) (212 aa) fasta scores: E(): 4.7e-23, 35.84% id in 212 aa; hypothetical protein 4230162 2885616 ECA3786 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051875.1 4229494 R 218491 CDS YP_051876.1 50122709 2882939 complement(4230366..4231793) 1 NC_004547.2 E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; dihydrolipoamide dehydrogenase 4231793 lpdA 2882939 lpdA Pectobacterium atrosepticum SCRI1043 dihydrolipoamide dehydrogenase YP_051876.1 4230366 R 218491 CDS YP_051877.1 50122710 2884502 complement(4232027..4233904) 1 NC_004547.2 E2 component of pyruvate dehydrogenase multienzyme complex; in Escherichia coli AceF contains three N-terminal lipoyl domains; dihydrolipoamide acetyltransferase 4233904 aceF 2884502 aceF Pectobacterium atrosepticum SCRI1043 dihydrolipoamide acetyltransferase YP_051877.1 4232027 R 218491 CDS YP_051878.1 50122711 2884501 complement(4233919..4236582) 1 NC_004547.2 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; pyruvate dehydrogenase subunit E1 4236582 aceE 2884501 aceE Pectobacterium atrosepticum SCRI1043 pyruvate dehydrogenase subunit E1 YP_051878.1 4233919 R 218491 CDS YP_051879.1 50122712 2882092 complement(4236725..4237489) 1 NC_004547.2 activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex; transcriptional regulator PdhR 4237489 pdhR 2882092 pdhR Pectobacterium atrosepticum SCRI1043 transcriptional regulator PdhR YP_051879.1 4236725 R 218491 CDS YP_051880.1 50122713 2884128 4238161..4239519 1 NC_004547.2 Similar to Escherichia coli aromatic amino acid transport protein AroP or b0112 SWALL:AROP_ECOLI (SWALL:P15993) (457 aa) fasta scores: E(): 5.2e-136, 76.78% id in 448 aa; aromatic amino acid transport protein 4239519 aroP 2884128 aroP Pectobacterium atrosepticum SCRI1043 aromatic amino acid transport protein YP_051880.1 4238161 D 218491 CDS YP_051881.1 50122714 2885617 4239710..4241143 1 NC_004547.2 Similar to Salmonella typhimurium hypothetical 52.4 kDa protein stm0149 SWALL:Q9L4I1 (EMBL:AJ242516) (468 aa) fasta scores: E(): 4.5e-155, 79.78% id in 455 aa, and to Escherichia coli hypothetical symporter yicj or b3657 SWALL:YICJ_ECOLI (SWALL:P31435) (460 aa) fasta scores: E(): 2.9e-87, 46.22% id in 450 aa; hypothetical protein 4241143 2885617 ECA3792 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051881.1 4239710 D 218491 CDS YP_051882.1 50122715 2881797 4241118..4242077 1 NC_004547.2 Similar to Streptomyces chartreusis alpha-L-arabinofuranosidase II precursor SWALL:ABF2_STRCX (SWALL:P82594) (328 aa) fasta scores: E(): 1e-65, 54.19% id in 286 aa, and to Salmonella typhi putatuve glycosysl hydrolase sty0170 SWALL:Q8Z9F3 (EMBL:AL627265) (316 aa) fasta scores: E(): 2.9e-102, 74.76% id in 313 aa; glycosyl hydrolase 4242077 2881797 ECA3793 Pectobacterium atrosepticum SCRI1043 glycosyl hydrolase YP_051882.1 4241118 D 218491 CDS YP_051883.1 50122716 2884181 complement(4242114..4242968) 1 NC_004547.2 involved in regulation of beta-lactamase; signaling protein; regulatory protein AmpE 4242968 ampE 2884181 ampE Pectobacterium atrosepticum SCRI1043 regulatory protein AmpE YP_051883.1 4242114 R 218491 CDS YP_051884.1 50122717 2884180 complement(4242965..4243540) 1 NC_004547.2 Similar to Escherichia coli ampd protein AmpD or b0110 SWALL:AMPD_ECOLI (SWALL:P13016) (183 aa) fasta scores: E(): 1.2e-51, 67.21% id in 183 aa, and to Enterobacter cloacae AmpD protein AmpD SWALL:AMPD_ENTCL (SWALL:P82973) (187 aa) fasta scores: E(): 5.9e-53, 69.1% id in 178 aa; N-acetyl-anhydromuranmyl-L-alanine amidase 4243540 ampD 2884180 ampD Pectobacterium atrosepticum SCRI1043 N-acetyl-anhydromuranmyl-L-alanine amidase YP_051884.1 4242965 R 218491 CDS YP_051885.1 50122718 2884231 4243947..4244819 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri nucleoside-specific channel-forming protein Tsx precursor Tsx or NupA or b0411 or z0512 or ecs0464 or sf0348 SWALL:TSX_ECOLI (SWALL:P22786) (294 aa) fasta scores: E(): 3.1e-92, 73.46% id in 294 aa; nucleoside-specific channel-forming protein 4244819 tsx 2884231 tsx Pectobacterium atrosepticum SCRI1043 nucleoside-specific channel-forming protein YP_051885.1 4243947 D 218491 CDS YP_051886.1 50122719 2885134 4244964..4245854 1 NC_004547.2 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; quinolinate phosphoribosyltransferase 4245854 nadC 2885134 nadC Pectobacterium atrosepticum SCRI1043 quinolinate phosphoribosyltransferase YP_051886.1 4244964 D 218491 CDS YP_051887.1 50122720 2882896 4246180..4246626 1 NC_004547.2 Similar to Escherichia coli prepilin peptidase dependent protein D precursor PpdD or b0108 SWALL:PPDD_ECOLI (SWALL:P36647) (146 aa) fasta scores: E(): 2.8e-32, 60.69% id in 145 aa; major pilin subunit 4246626 ppdD 2882896 ppdD Pectobacterium atrosepticum SCRI1043 major pilin subunit YP_051887.1 4246180 D 218491 CDS YP_051888.1 50122721 2882039 4246629..4248101 1 NC_004547.2 Similar to Escherichia coli protein transport protein HofB or HopB or b0107 SWALL:HOFB_ECOLI (SWALL:P36645) (461 aa) fasta scores: E(): 3.2e-77, 51.06% id in 470 aa; hypothetical protein 4248101 hofB 2882039 hofB Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051888.1 4246629 D 218491 CDS YP_051889.1 50122722 2882040 4248098..4249303 1 NC_004547.2 Similar to Escherichia coli protein transport protein HofC or HopC or b0106 SWALL:HOFC_ECOLI (SWALL:P36646) (400 aa) fasta scores: E(): 5.6e-55, 40.15% id in 401 aa; type IV pilin biogenesis protein 4249303 hofC 2882040 hofC Pectobacterium atrosepticum SCRI1043 type IV pilin biogenesis protein YP_051889.1 4248098 D 218491 CDS YP_051890.1 50122723 2883708 complement(4249388..4250428) 1 NC_004547.2 catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate; guanosine 5'-monophosphate oxidoreductase 4250428 guaC 2883708 guaC Pectobacterium atrosepticum SCRI1043 guanosine 5'-monophosphate oxidoreductase YP_051890.1 4249388 R 218491 CDS YP_051891.1 50122724 2884952 4250722..4251348 1 NC_004547.2 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 4251348 coaE 2884952 coaE Pectobacterium atrosepticum SCRI1043 dephospho-CoA kinase YP_051891.1 4250722 D 218491 CDS YP_051892.1 50122725 2881798 4251341..4252093 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3431 or y0756 SWALL:AAM84343 (EMBL:AJ414157) (250 aa) fasta scores: E(): 1.2e-65, 69.2% id in 250 aa, and to Escherichia coli O6 hypothetical protein yacf or c0122 SWALL:AAN78620 (EMBL:AE016755) (247 aa) fasta scores: E(): 1.7e-63, 67.34% id in 245 aa; hypothetical protein 4252093 2881798 ECA3803 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051892.1 4251341 D 218491 CDS YP_051893.1 50122726 2881799 4252166..4252360 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3432 or y0755 SWALL:Q8ZBH8 (EMBL:AJ414157) (68 aa) fasta scores: E(): 2.6e-16, 66.12% id in 62 aa, and to Escherichia coli O6 hypothetical protein yacg or c0121 SWALL:AAN78619 (EMBL:AE016755) (65 aa) fasta scores: E(): 2e-15, 65% id in 60 aa; hypothetical protein 4252360 2881799 ECA3804 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051893.1 4252166 D 218491 CDS YP_051894.1 50122727 2885294 complement(4252404..4252799) 1 NC_004547.2 Similar to Escherichia coli mutator MutT protein MutT or b0099 SWALL:MUTT_ECOLI (SWALL:P08337) (129 aa) fasta scores: E(): 6.2e-23, 55.72% id in 131 aa; nucleoside triphosphate pyrophosphohydrolase 4252799 mutT 2885294 mutT Pectobacterium atrosepticum SCRI1043 nucleoside triphosphate pyrophosphohydrolase YP_051894.1 4252404 R 218491 CDS YP_051895.1 50122728 2884411 complement(4252890..4255592) 1 NC_004547.2 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 4255592 secA 2884411 secA Pectobacterium atrosepticum SCRI1043 preprotein translocase subunit SecA YP_051895.1 4252890 R 218491 CDS YP_051896.1 50122729 2884405 complement(4255704..4256219) 1 NC_004547.2 secM translational pause allows for the initiation of secA translation; SecA regulator SecM 4256219 secM 2884405 secM Pectobacterium atrosepticum SCRI1043 SecA regulator SecM YP_051896.1 4255704 R 218491 CDS YP_051897.1 50122730 2881800 4256247..4256774 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo0562 or y3619 SWALL:Q8ZIE2 (EMBL:AJ414143) (176 aa) fasta scores: E(): 4.8e-42, 67.81% id in 174 aa, and to Vibrio cholerae hypothetical protein Vc2395 SWALL:Q9KPH3 (EMBL:AE004310) (157 aa) fasta scores: E(): 3.3e-11, 33.74% id in 163 aa; hypothetical protein 4256774 2881800 ECA3808 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051897.1 4256247 D 218491 CDS YP_051898.1 50122731 2882789 complement(4256787..4257707) 1 NC_004547.2 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 4257707 lpxC 2882789 lpxC Pectobacterium atrosepticum SCRI1043 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_051898.1 4256787 R 218491 CDS YP_051899.1 50122732 2883481 complement(4257809..4258960) 1 NC_004547.2 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 4258960 ftsZ 2883481 ftsZ Pectobacterium atrosepticum SCRI1043 cell division protein FtsZ YP_051899.1 4257809 R 218491 CDS YP_051900.1 50122733 2884056 complement(4259029..4260285) 1 NC_004547.2 ATP-binding involved in recruitment of FtsK to Z ring; essential cell division protein; colocalizes with FtsZ through direct interaction to the septal ring structure; structurally similar to eukaryotic actin; binds directly to the cell membrane; cell division protein FtsA 4260285 ftsA 2884056 ftsA Pectobacterium atrosepticum SCRI1043 cell division protein FtsA YP_051900.1 4259029 R 218491 CDS YP_051901.1 50122734 2883558 complement(4260282..4261166) 1 NC_004547.2 involved in septum formation; cell division protein FtsQ 4261166 ftsQ 2883558 ftsQ Pectobacterium atrosepticum SCRI1043 cell division protein FtsQ YP_051901.1 4260282 R 218491 CDS YP_051902.1 50122735 2884756 complement(4261168..4262088) 1 NC_004547.2 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanine--D-alanine ligase 4262088 ddl 2884756 ddl Pectobacterium atrosepticum SCRI1043 D-alanine--D-alanine ligase YP_051902.1 4261168 R 218491 CDS YP_051903.1 50122736 2881742 complement(4262097..4263557) 1 NC_004547.2 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 4263557 murC 2881742 murC Pectobacterium atrosepticum SCRI1043 UDP-N-acetylmuramate--L-alanine ligase YP_051903.1 4262097 R 218491 CDS YP_051904.1 50122737 2881728 complement(4263620..4264711) 1 NC_004547.2 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 4264711 murG 2881728 murG Pectobacterium atrosepticum SCRI1043 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_051904.1 4263620 R 218491 CDS YP_051905.1 50122738 2883559 complement(4264708..4265910) 1 NC_004547.2 integral membrane protein involved in stabilizing FstZ ring during cell division; cell division protein FtsW 4265910 ftsW 2883559 ftsW Pectobacterium atrosepticum SCRI1043 cell division protein FtsW YP_051905.1 4264708 R 218491 CDS YP_051906.1 50122739 2881743 complement(4265910..4267226) 1 NC_004547.2 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 4267226 murD 2881743 murD Pectobacterium atrosepticum SCRI1043 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_051906.1 4265910 R 218491 CDS YP_051907.1 50122740 2881747 complement(4267230..4268312) 1 NC_004547.2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 4268312 mraY 2881747 mraY Pectobacterium atrosepticum SCRI1043 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_051907.1 4267230 R 218491 CDS YP_051908.1 50122741 2881727 complement(4268306..4269667) 1 NC_004547.2 Similar to Escherichia coli UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase MurF or Mra or b0086 SWALL:MURF_ECOLI (SWALL:P11880) (452 aa) fasta scores: E(): 1.5e-118, 71.3% id in 453 aa; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 4269667 murF 2881727 murF Pectobacterium atrosepticum SCRI1043 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_051908.1 4268306 R 218491 CDS YP_051909.1 50122742 2881726 complement(4269664..4271151) 1 NC_004547.2 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 4271151 murE 2881726 murE Pectobacterium atrosepticum SCRI1043 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_051909.1 4269664 R 218491 CDS YP_051910.1 50122743 2884013 complement(4271138..4272901) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 peptidoglycan synthetase FtsI precursor FtsI or PbpB or b0084 or z0094 or ecs0088 SWALL:FTSI_ECOLI (SWALL:P04286) (588 aa) fasta scores: E(): 1.7e-197, 86.22% id in 588 aa; peptidoglycan synthetase 4272901 ftsI 2884013 ftsI Pectobacterium atrosepticum SCRI1043 peptidoglycan synthetase YP_051910.1 4271138 R 218491 CDS YP_051911.1 50122744 2883714 complement(4272925..4273245) 1 NC_004547.2 membrane bound cell division protein at septum containing leucine zipper motif; cell division protein FtsL 4273245 ftsL 2883714 ftsL Pectobacterium atrosepticum SCRI1043 cell division protein FtsL YP_051911.1 4272925 R 218491 CDS YP_051912.1 50122745 2881698 complement(4273242..4274186) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 D-adenosyl-methyltransferase MraW mraw or b0082 or z0092 or ecs0086 SWALL:MRAW_ECOLI (SWALL:P18595) (313 aa) fasta scores: E(): 6.8e-94, 79.93% id in 314 aa; S-adenosyl-methyltransferase MraW 4274186 mraW 2881698 mraW Pectobacterium atrosepticum SCRI1043 S-adenosyl-methyltransferase MraW YP_051912.1 4273242 R 218491 CDS YP_051913.1 50122746 2881748 complement(4274189..4274647) 1 NC_004547.2 MraZ; UPF0040; crystal structure shows similarity to AbrB; cell division protein MraZ 4274647 mraZ 2881748 mraZ Pectobacterium atrosepticum SCRI1043 cell division protein MraZ YP_051913.1 4274189 R 218491 CDS YP_051914.1 50122747 2885771 4275465..4275902 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo0544 SWALL:Q8ZIF9 (EMBL:AJ414143) (148 aa) fasta scores: E(): 5.1e-40, 72.02% id in 143 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein ygaw or b2670 or c3221 or z3970 or ecs3531 or sf2698 SWALL:YGAW_ECOLI (SWALL:P76626) (149 aa) fasta scores: E(): 9.4e-34, 61.53% id in 143 aa; hypothetical protein 4275902 2885771 ECA3826 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051914.1 4275465 D 218491 CDS YP_051915.1 50122748 2885772 complement(4275970..4276974) 1 NC_004547.2 binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism; DNA-binding transcriptional regulator FruR 4276974 2885772 ECA3827 Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional regulator FruR YP_051915.1 4275970 R 218491 CDS YP_051916.1 50122749 2882125 complement(4277370..4277861) 1 NC_004547.2 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 4277861 ilvH 2882125 ilvH Pectobacterium atrosepticum SCRI1043 acetolactate synthase 3 regulatory subunit YP_051916.1 4277370 R 218491 CDS YP_051917.1 50122750 2882126 complement(4277864..4279582) 1 NC_004547.2 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; acetolactate synthase 3 catalytic subunit 4279582 ilvI 2882126 ilvI Pectobacterium atrosepticum SCRI1043 acetolactate synthase 3 catalytic subunit YP_051917.1 4277864 R 218491 CDS YP_051918.1 50122751 2885773 complement(4279945..4281750) 1 NC_004547.2 Similar to Yersinia pestis AMP-binding enzyme-family protein ypo0537 or y3641 SWALL:Q8ZIG5 (EMBL:AJ414143) (601 aa) fasta scores: E(): 1.8e-160, 66.61% id in 599 aa, and to Vibrio vulnificus long-chain acyl-coa synthetase vv10649 SWALL:AAO09161 (EMBL:AE016799) (601 aa) fasta scores: E(): 1.8e-133, 55.31% id in 593 aa; AMP-binding protein 4281750 2885773 ECA3830 Pectobacterium atrosepticum SCRI1043 AMP-binding protein YP_051918.1 4279945 R 218491 CDS YP_051919.1 50122752 2883504 4282166..4283764 1 NC_004547.2 catalyzes the formation of 2-isopropylmalate from acetyl-CoA and 2-oxoisovalerate in leucine biosynthesis; 2-isopropylmalate synthase 4283764 leuA 2883504 leuA Pectobacterium atrosepticum SCRI1043 2-isopropylmalate synthase YP_051919.1 4282166 D 218491 CDS YP_051920.1 50122753 2883505 4283764..4284855 1 NC_004547.2 catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; 3-isopropylmalate dehydrogenase 4284855 leuB 2883505 leuB Pectobacterium atrosepticum SCRI1043 3-isopropylmalate dehydrogenase YP_051920.1 4283764 D 218491 CDS YP_051921.1 50122754 2883432 4284858..4286258 1 NC_004547.2 dehydratase component, catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; isopropylmalate isomerase large subunit 4286258 leuC 2883432 leuC Pectobacterium atrosepticum SCRI1043 isopropylmalate isomerase large subunit YP_051921.1 4284858 D 218491 CDS YP_051922.1 50122755 2883433 4286272..4286874 1 NC_004547.2 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; isopropylmalate isomerase small subunit 4286874 leuD 2883433 leuD Pectobacterium atrosepticum SCRI1043 isopropylmalate isomerase small subunit YP_051922.1 4286272 D 218491 CDS YP_051923.1 50122756 2885756 complement(4286955..4287266) 1 NC_004547.2 Similar to Pseudomonas putida conserved hypothetical protein pp2384 SWALL:AAN67997 (EMBL:AE016783) (104 aa) fasta scores: E(): 8.6e-14, 40.77% id in 103 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2038 SWALL:Q9I277 (EMBL:AE004630) (104 aa) fasta scores: E(): 1.9e-13, 42.85% id in 98 aa; hypothetical protein 4287266 2885756 ECA3835 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051923.1 4286955 R 218491 CDS YP_051924.1 50122757 2885757 complement(4287263..4287997) 1 NC_004547.2 Similar to Pseudomonas putida branched-chain amino acid transport protein AzlC or pp2385 SWALL:AAN67998 (EMBL:AE016783) (230 aa) fasta scores: E(): 3e-36, 47.36% id in 209 aa, and to Vibrio cholerae AzlC family protein vca1002 SWALL:Q9KKU8 (EMBL:AE004427) (239 aa) fasta scores: E(): 1.2e-34, 44.79% id in 221 aa; hypothetical protein 4287997 2885757 ECA3836 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051924.1 4287263 R 218491 CDS YP_051925.1 50122758 2885758 complement(4288182..4289018) 1 NC_004547.2 Similar to Vibrio vulnificus AraC-type DNA-binding domain-containing protein vv20572 SWALL:AAO07518 (EMBL:AE016810) (276 aa) fasta scores: E(): 4.1e-52, 48.36% id in 275 aa, and to Vibrio cholerae transcriptional regulator, AraC/XylS family vca1001 SWALL:Q9KKU9 (EMBL:AE004427) (277 aa) fasta scores: E(): 3.6e-50, 50% id in 270 aa; AraC family transcriptional regulator 4289018 2885758 ECA3837 Pectobacterium atrosepticum SCRI1043 AraC family transcriptional regulator YP_051925.1 4288182 R 218491 CDS YP_051926.1 50122759 2885676 complement(4289237..4290856) 1 NC_004547.2 Similar to Escherichia coli methyl-accepting chemotaxis protein III Trg or b1421 SWALL:MCP3_ECOLI (SWALL:P05704) (546 aa) fasta scores: E(): 3.7e-77, 49.51% id in 515 aa, and to Salmonella typhimurium methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor trg or stm1626 SWALL:Q8ZPA9 (EMBL:AE008771) (541 aa) fasta scores: E(): 4.2e-82, 52.97% id in 521 aa; methyl-accepting chemotaxis protein 4290856 2885676 ECA3838 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_051926.1 4289237 R 218491 CDS YP_051927.1 50122760 2885677 complement(4290971..4291162) 1 NC_004547.2 Similar to Influenza A virus matrix protein 2 M SWALL:Q9Q0L9 (EMBL:AF144306) (97 aa) fasta scores: E(): 1.4, 45.45% id in 33 aa; matrix protein 4291162 2885677 ECA3839 Pectobacterium atrosepticum SCRI1043 matrix protein YP_051927.1 4290971 R 218491 CDS YP_051928.1 50122761 2885678 4291683..4292240 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein y5204 or y1108 or ypmt1.54 SWALL:O68768 (EMBL:AF053947) (187 aa) fasta scores: E(): 7.6e-34, 56.88% id in 167 aa; hypothetical protein 4292240 2885678 ECA3840 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051928.1 4291683 D 218491 CDS YP_051929.1 50122762 2885679 4292628..4294286 1 NC_004547.2 activates sgrS under glucose-phosphate stress conditions; transcriptional regulator SgrR 4294286 2885679 ECA3841 Pectobacterium atrosepticum SCRI1043 transcriptional regulator SgrR YP_051929.1 4292628 D 218491 CDS YP_051930.1 50122763 2885700 complement(4294345..4295274) 1 NC_004547.2 Similar to Cicer arietinum isoflavone reductase Ifr SWALL:IFR_CICAR (SWALL:Q00016) (318 aa) fasta scores: E(): 8.4e-10, 26.11% id in 291 aa, and to Salmonella typhi oxidoreductase sty1385 SWALL:Q8Z7A4 (EMBL:AL627270) (309 aa) fasta scores: E(): 3.6e-57, 54.88% id in 297 aa; isoflavone oxidoreductase 4295274 2885700 ECA3842 Pectobacterium atrosepticum SCRI1043 isoflavone oxidoreductase YP_051930.1 4294345 R 218491 CDS YP_051931.1 50122764 2885701 4295557..4296462 1 NC_004547.2 Similar to Burkholderia cepacia transcriptional regulator CeoR SWALL:Q8VL17 (EMBL:AY008288) (334 aa) fasta scores: E(): 1e-47, 45.27% id in 296 aa, and to Salmonella typhi transcriptional regulator sty1386 SWALL:Q8Z7A3 (EMBL:AL627270) (301 aa) fasta scores: E(): 1.3e-47, 45.36% id in 302 aa; LysR family transcriptional regulator 4296462 2885701 ECA3843 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_051931.1 4295557 D 218491 CDS YP_051932.2 161501870 2884312 4296786..4297769 1 NC_004547.2 part of the thiamine and TPP transport system tbpA-thiPQ; thiamine transporter substrate binding subunit 4297769 tbpA 2884312 tbpA Pectobacterium atrosepticum SCRI1043 thiamine transporter substrate binding subunit YP_051932.2 4296786 D 218491 CDS YP_051933.1 50122766 2884289 4297745..4299352 1 NC_004547.2 permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; thiamine transporter membrane protein 4299352 thiP 2884289 thiP Pectobacterium atrosepticum SCRI1043 thiamine transporter membrane protein YP_051933.1 4297745 D 218491 CDS YP_051934.2 229220651 2884290 4299339..4300049 1 NC_004547.2 with TbpA and ThiP is part of the thiamine and TPP transport system; thiamine transporter ATP-binding subunit 4300049 thiQ 2884290 thiQ Pectobacterium atrosepticum SCRI1043 thiamine transporter ATP-binding subunit YP_051934.2 4299339 D 218491 CDS YP_051935.1 50122768 2885702 complement(4300054..4301676) 1 NC_004547.2 Similar to Butyrivibrio fibrisolvens xylosidase/arabinosidase [includes: beta-xylosidase; alpha-L-arabinofuranosidase] xylB SWALL:XYLB_BUTFI (SWALL:P45982) (517 aa) fasta scores: E(): 4.4e-13, 25.19% id in 520 aa, and to Xanthomonas campestris xylosidase/arabinosidase xcc0149 SWALL:Q8PE34 (EMBL:AE012110) (526 aa) fasta scores: E(): 3.3e-128, 58.97% id in 507 aa; xylosidase/arabinosidase 4301676 2885702 ECA3847 Pectobacterium atrosepticum SCRI1043 xylosidase/arabinosidase YP_051935.1 4300054 R 218491 CDS YP_051936.1 50122769 2882282 4302196..4303860 1 NC_004547.2 catalyzes the formation of 2-acetolactate from pyruvate; acetolactate synthase catalytic subunit 4303860 ilvB 2882282 ilvB Pectobacterium atrosepticum SCRI1043 acetolactate synthase catalytic subunit YP_051936.1 4302196 D 218491 CDS YP_051937.1 50122770 2881787 4303866..4304159 1 NC_004547.2 with IlvB catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase small subunit; acetolactate synthase 1 regulatory subunit 4304159 ilvN 2881787 ilvN Pectobacterium atrosepticum SCRI1043 acetolactate synthase 1 regulatory subunit YP_051937.1 4303866 D 218491 CDS YP_051938.1 50122771 2885278 complement(4304195..4304965) 1 NC_004547.2 Similar to Yersinia pestis deda-family membrane protein ypo0519 or y3654 SWALL:Q8ZIH8 (EMBL:AJ414143) (255 aa) fasta scores: E(): 6.9e-66, 65.23% id in 256 aa, and to Escherichia coli O6 hypothetical protein yabi or c0081 SWALL:AAN78577 (EMBL:AE016755) (254 aa) fasta scores: E(): 5.8e-65, 66.53% id in 254 aa; hypothetical protein 4304965 2885278 ECA3850 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051938.1 4304195 R 218491 CDS YP_051939.1 50122772 2885279 4305089..4306693 1 NC_004547.2 Similar to Pseudomonas putida ggdef family protein pp2413 SWALL:AAN68025 (EMBL:AE016783) (544 aa) fasta scores: E(): 3.3e-96, 49.32% id in 515 aa, and to Ralstonia solanacearum probable transmembrane protein rsc1893 or rs03455 SWALL:Q8XY70 (EMBL:AL646067) (533 aa) fasta scores: E(): 8.9e-78, 44.14% id in 512 aa; hypothetical protein 4306693 2885279 ECA3851 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051939.1 4305089 D 218491 CDS YP_051940.1 50122773 2883190 4306807..4309173 1 NC_004547.2 Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; DNA polymerase II 4309173 polB 2883190 polB Pectobacterium atrosepticum SCRI1043 DNA polymerase II YP_051940.1 4306807 D 218491 CDS YP_051941.1 50122774 2882431 4309359..4312262 1 NC_004547.2 transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; ATP-dependent helicase HepA 4312262 hepA 2882431 hepA Pectobacterium atrosepticum SCRI1043 ATP-dependent helicase HepA YP_051941.1 4309359 D 218491 CDS YP_051942.1 50122775 2885048 4312461..4313114 1 NC_004547.2 Similar to Escherichia coli ribosomal large subunit pseudouridine synthase A RluA or b0058 SWALL:RLUA_ECOLI (SWALL:P39219) (218 aa) fasta scores: E(): 1.5e-68, 77.88% id in 217 aa; ribosomal large subunit pseudouridine synthase A 4313114 rluA 2885048 rluA Pectobacterium atrosepticum SCRI1043 ribosomal large subunit pseudouridine synthase A YP_051942.1 4312461 D 218491 CDS YP_051943.1 50122776 2883258 complement(4313211..4314086) 1 NC_004547.2 functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system; Dna-J like membrane chaperone protein 4314086 djlA 2883258 djlA Pectobacterium atrosepticum SCRI1043 Dna-J like membrane chaperone protein YP_051943.1 4313211 R 218491 CDS YP_051944.1 50122777 2881756 4314274..4316637 1 NC_004547.2 determines N-hexane tolerance and is involved in outer membrane permeability; organic solvent tolerance protein 4316637 imp 2881756 imp Pectobacterium atrosepticum SCRI1043 organic solvent tolerance protein YP_051944.1 4314274 D 218491 CDS YP_051945.1 50122778 2884327 4316738..4318033 1 NC_004547.2 Chaperone involved in the folding of extracytoplasmic proteins, especially OmpA, OmpF and LamB; peptidyl-prolyl cis-trans isomerase SurA 4318033 surA 2884327 surA Pectobacterium atrosepticum SCRI1043 peptidyl-prolyl cis-trans isomerase SurA YP_051945.1 4316738 D 218491 CDS YP_051946.1 50122779 2882093 4318033..4319034 1 NC_004547.2 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 4319034 pdxA 2882093 pdxA Pectobacterium atrosepticum SCRI1043 4-hydroxythreonine-4-phosphate dehydrogenase YP_051946.1 4318033 D 218491 CDS YP_051947.1 50122780 2883738 4319027..4319845 1 NC_004547.2 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 4319845 ksgA 2883738 ksgA Pectobacterium atrosepticum SCRI1043 dimethyladenosine transferase YP_051947.1 4319027 D 218491 CDS YP_051948.1 50122781 2884174 4319858..4320235 1 NC_004547.2 protein associated with Co2+ and Mg2+ efflux; ApaG protein 4320235 apaG 2884174 apaG Pectobacterium atrosepticum SCRI1043 ApaG protein YP_051948.1 4319858 D 218491 CDS YP_051949.1 50122782 2884175 4320238..4321083 1 NC_004547.2 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; diadenosine tetraphosphatase 4321083 apaH 2884175 apaH Pectobacterium atrosepticum SCRI1043 diadenosine tetraphosphatase YP_051949.1 4320238 D 218491 CDS YP_051950.1 50122783 2885280 complement(4321758..4322282) 1 NC_004547.2 Similar to Pseudomonas putida conserved hypothetical protein pp3609 SWALL:Q88GV8 (EMBL:AE016787) (176 aa) fasta scores: E(): 2.2e-29, 50.93% id in 161 aa, and to Pseudomonas aeruginosa hypothetical protein Pa3320 SWALL:Q9HYS5 (EMBL:AE004754) (151 aa) fasta scores: E(): 1.7e-18, 46.37% id in 138 aa; hypothetical protein 4322282 2885280 ECA3862 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051950.1 4321758 R 218491 CDS YP_051951.1 50122784 2885281 4322394..4323299 1 NC_004547.2 Similar to Pseudomonas putida transcriptional regulator, LysR family pp3608 SWALL:AAN69208 (EMBL:AE016787) (309 aa) fasta scores: E(): 1.2e-68, 56.18% id in 299 aa, and to Pseudomonas glumae lys-r type regulatory protein toxR SWALL:Q8RS39 (EMBL:AB040403) (333 aa) fasta scores: E(): 9.1e-65, 55.1% id in 294 aa; LysR family transcriptional regulator 4323299 2885281 ECA3863 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_051951.1 4322394 D 218491 CDS YP_051952.1 50122785 2885386 complement(4323391..4323873) 1 NC_004547.2 catalyzes the reduction of dihydrofolate to tetrahydrofolate; dihydrofolate reductase 4323873 folA 2885386 folA Pectobacterium atrosepticum SCRI1043 dihydrofolate reductase YP_051952.1 4323391 R 218491 CDS YP_051953.1 50122786 2885210 complement(4323972..4324442) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo0485 SWALL:Q8ZIL1 (EMBL:AJ414143) (151 aa) fasta scores: E(): 1.8e-48, 85.06% id in 154 aa, and to Salmonella typhi membrane protein sty4898 SWALL:Q8Z0W0 (EMBL:AL627284) (157 aa) fasta scores: E(): 2.1e-43, 71.97% id in 157 aa; hypothetical protein 4324442 2885210 ECA3865 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051953.1 4323972 R 218491 CDS YP_051954.1 50122787 2885211 complement(4324433..4325254) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo0484 or y3690 SWALL:Q8ZIL2 (EMBL:AJ414143) (266 aa) fasta scores: E(): 1.7e-82, 82.14% id in 252 aa, and to Salmonella typhi membrane protein sty4899 SWALL:Q8Z0V9 (EMBL:AL627284) (303 aa) fasta scores: E(): 1.1e-75, 70.49% id in 261 aa; hypothetical protein 4325254 2885211 ECA3866 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051954.1 4324433 R 218491 CDS YP_051955.1 50122788 2885212 4325410..4326024 1 NC_004547.2 Similar to Yersinia pestis lyse type translocator ypo0483 SWALL:Q8ZIL3 (EMBL:AJ414143) (204 aa) fasta scores: E(): 5.5e-66, 78.92% id in 204 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2710 pa2710 SWALL:Q9I0D2 (EMBL:AE004699) (204 aa) fasta scores: E(): 4.4e-59, 74.87% id in 203 aa; LysE-type translocator 4326024 2885212 ECA3867 Pectobacterium atrosepticum SCRI1043 LysE-type translocator YP_051955.1 4325410 D 218491 CDS YP_051956.1 50122789 2885195 complement(4326126..4326494) 1 NC_004547.2 Similar to Rhizobium loti hypothetical protein Mll3207 SWALL:Q98GR5 (EMBL:AP003001) (131 aa) fasta scores: E(): 5.1e-21, 47.1% id in 121 aa, and to Pantoea agglomerans EhpR SWALL:AAN40889 (EMBL:AF451953) (129 aa) fasta scores: E(): 1.2e-05, 32.2% id in 118 aa; hypothetical protein 4326494 2885195 ECA3868 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051956.1 4326126 R 218491 CDS YP_051957.1 50122790 2885196 complement(4326592..4327281) 1 NC_004547.2 Similar to Rhizobium meliloti transcription regulator protein r00227 or smc02902 SWALL:Q92SX3 (EMBL:AL591782) (230 aa) fasta scores: E(): 1.8e-52, 60.61% id in 226 aa, and to Xanthomonas axonopodis transcriptional regulator xac1298 SWALL:Q8PMX7 (EMBL:AE011760) (231 aa) fasta scores: E(): 3e-38, 50% id in 218 aa; transcriptional regulator 4327281 2885196 ECA3869 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_051957.1 4326592 R 218491 CDS YP_051958.1 50122791 2882113 complement(4327460..4330684) 1 NC_004547.2 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 4330684 carB 2882113 carB Pectobacterium atrosepticum SCRI1043 carbamoyl phosphate synthase large subunit YP_051958.1 4327460 R 218491 CDS YP_051959.1 50122792 2882112 complement(4330699..4331847) 1 NC_004547.2 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 4331847 carA 2882112 carA Pectobacterium atrosepticum SCRI1043 carbamoyl phosphate synthase small subunit YP_051959.1 4330699 R 218491 CDS YP_051960.1 50122793 2885197 complement(4332293..4333114) 1 NC_004547.2 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 4333114 2885197 ECA3872 Pectobacterium atrosepticum SCRI1043 dihydrodipicolinate reductase YP_051960.1 4332293 R 218491 CDS YP_051961.1 50122794 2881577 complement(4333452..4334402) 1 NC_004547.2 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 4334402 ispH 2881577 ispH Pectobacterium atrosepticum SCRI1043 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_051961.1 4333452 R 218491 CDS YP_051962.1 50122795 2882211 complement(4334383..4334856) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri FkbP-type 16 kDa peptidyl-prolyl cis-trans isomerase FkpB or SlpA or b0028 or c0032 or z0033 or ecs0031 or sf0024 SWALL:FKBX_ECOLI (SWALL:P22563) (148 aa) fasta scores: E(): 2.7e-33, 61.8% id in 144 aa; FKBP-type peptidylprolyl isomerase 4334856 fkpB 2882211 fkpB Pectobacterium atrosepticum SCRI1043 FKBP-type peptidylprolyl isomerase YP_051962.1 4334383 R 218491 CDS YP_051963.1 50122796 2882261 complement(4334856..4335368) 1 NC_004547.2 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 4335368 lspA 2882261 lspA Pectobacterium atrosepticum SCRI1043 lipoprotein signal peptidase YP_051963.1 4334856 R 218491 CDS YP_051964.1 50122797 2882280 complement(4335368..4338181) 1 NC_004547.2 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 4338181 ileS 2882280 ileS Pectobacterium atrosepticum SCRI1043 isoleucyl-tRNA synthetase YP_051964.1 4335368 R 218491 CDS YP_051965.1 50122798 2884784 complement(4338213..4339154) 1 NC_004547.2 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 4339154 ribF 2884784 ribF Pectobacterium atrosepticum SCRI1043 bifunctional riboflavin kinase/FMN adenylyltransferase YP_051965.1 4338213 R 218491 CDS YP_051966.1 50122799 2884458 4339580..4339843 1 NC_004547.2 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 4339843 rpsT 2884458 rpsT Pectobacterium atrosepticum SCRI1043 30S ribosomal protein S20 YP_051966.1 4339580 D 218491 CDS YP_051967.1 50122800 2882408 complement(4339921..4340841) 1 NC_004547.2 Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC; transcriptional activator NhaR 4340841 nhaR 2882408 nhaR Pectobacterium atrosepticum SCRI1043 transcriptional activator NhaR YP_051967.1 4339921 R 218491 CDS YP_051968.1 50122801 2882751 complement(4340889..4342070) 1 NC_004547.2 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 4342070 nhaA 2882751 nhaA Pectobacterium atrosepticum SCRI1043 pH-dependent sodium/proton antiporter YP_051968.1 4340889 R 218491 CDS YP_051969.1 50122802 2882235 complement(4342359..4343498) 1 NC_004547.2 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; molecular chaperone DnaJ 4343498 dnaJ 2882235 dnaJ Pectobacterium atrosepticum SCRI1043 molecular chaperone DnaJ YP_051969.1 4342359 R 218491 CDS YP_051970.1 50122803 2882236 complement(4343607..4345514) 1 NC_004547.2 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 4345514 dnaK 2882236 dnaK Pectobacterium atrosepticum SCRI1043 molecular chaperone DnaK YP_051970.1 4343607 R 218491 CDS YP_051971.1 50122804 2885801 4345979..4346554 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo0467 or y3707 SWALL:Q8ZIM8 (EMBL:AJ414142) (203 aa) fasta scores: E(): 7.3e-60, 84.86% id in 185 aa, and to Salmonella typhimurium, and Salmonella typhi regulator yaah or stm0009 or sty0009 SWALL:Q8XGB2 (EMBL:AE008693) (188 aa) fasta scores: E(): 2.7e-54, 78.91% id in 185 aa; hypothetical protein 4346554 2885801 ECA3883 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051971.1 4345979 D 218491 CDS YP_051972.1 50122805 2885802 complement(4346668..4348005) 1 NC_004547.2 Similar to Yersinia pestis transport protein ypo0465 or y3709 SWALL:Q8ZIN0 (EMBL:AJ414142) (462 aa) fasta scores: E(): 4e-123, 75.82% id in 426 aa, and to Pseudomonas putida major facilitator family transporter pp5330 SWALL:AAN70895 (EMBL:AE016794) (429 aa) fasta scores: E(): 2.5e-108, 67.95% id in 415 aa; transporter 4348005 2885802 ECA3884 Pectobacterium atrosepticum SCRI1043 transporter YP_051972.1 4346668 R 218491 CDS YP_051973.1 50122806 2881229 complement(4348133..4348720) 1 NC_004547.2 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 4348720 mogA 2881229 mogA Pectobacterium atrosepticum SCRI1043 molybdenum cofactor biosynthesis protein MogA YP_051973.1 4348133 R 218491 CDS YP_051974.1 50122807 2885803 4349112..4350200 1 NC_004547.2 Similar to the C-terminal region of many including Pseudomonas aeruginosa hypothetical protein Pa2870 SWALL:Q9HZX6 (EMBL:AE004713) (525 aa) fasta scores: E(): 1.9e-17, 39.39% id in 165 aa, and to Shewanella oneidensis ggdef domain protein so4457 SWALL:AAN57422 (EMBL:AE015878) (485 aa) fasta scores: E(): 2.1e-17, 39.03% id in 187 aa; hypothetical protein 4350200 2885803 ECA3886 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051974.1 4349112 D 218491 CDS YP_051975.1 50122808 2884319 complement(4350276..4351229) 1 NC_004547.2 Maintains the balance of metabolites in the pentose-phosphate pathway; transaldolase B 4351229 talB 2884319 talB Pectobacterium atrosepticum SCRI1043 transaldolase B YP_051975.1 4350276 R 218491 CDS YP_051976.1 50122809 2885804 4351702..4352475 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo0462 SWALL:Q8ZIN3 (EMBL:AJ414142) (258 aa) fasta scores: E(): 5.4e-78, 79.76% id in 257 aa, and to Escherichia coli O6 protein yaaa or c0010 SWALL:AAN78510 (EMBL:AE016755) (258 aa) fasta scores: E(): 1.7e-77, 80.15% id in 257 aa; hypothetical protein 4352475 2885804 ECA3888 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051976.1 4351702 D 218491 CDS YP_051977.1 50122810 2884282 complement(4352538..4353827) 1 NC_004547.2 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 4353827 thrC 2884282 thrC Pectobacterium atrosepticum SCRI1043 threonine synthase YP_051977.1 4352538 R 218491 CDS YP_051978.1 50122811 2884287 complement(4353831..4354760) 1 NC_004547.2 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 4354760 thrB 2884287 thrB Pectobacterium atrosepticum SCRI1043 homoserine kinase YP_051978.1 4353831 R 218491 CDS YP_051979.1 50122812 2884286 complement(4354763..4357222) 1 NC_004547.2 multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartokinase I/homoserine dehydrogenase I 4357222 thrA 2884286 thrA Pectobacterium atrosepticum SCRI1043 bifunctional aspartokinase I/homoserine dehydrogenase I YP_051979.1 4354763 R 218491 CDS YP_051980.1 50122813 2884920 complement(4357649..4358335) 1 NC_004547.2 member of the SPOUT superfamily of methyltransferases; RNA methyltransferase 4358335 2884920 ECA3892 Pectobacterium atrosepticum SCRI1043 RNA methyltransferase YP_051980.1 4357649 R 218491 CDS YP_051981.1 50122814 2884151 4359083..4359799 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri aerobic respiration control protein ArcA or Dye or FexA or SfrA or Seg or Msp or CpxC or b4401 or c5488 or z6004 or ecs5359 or sf4433 SWALL:ARCA_ECOLI (SWALL:P03026) (238 aa) fasta scores: E(): 6.2e-85, 94.11% id in 238 aa; two-component response regulator 4359799 arcA 2884151 arcA Pectobacterium atrosepticum SCRI1043 two-component response regulator YP_051981.1 4359083 D 218491 CDS YP_051982.1 50122815 2884941 complement(4359856..4360338) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri crea protein CreA or b4397 or c5484 or z6000 or ecs5355 or sf4429 SWALL:CREA_ECOLI (SWALL:P08367) (157 aa) fasta scores: E(): 3e-45, 78.8% id in 151 aa, and to Yersinia pestis exported protein ypo0457 or CreA or y3722 SWALL:Q8ZIN8 (EMBL:AJ414142) (155 aa) fasta scores: E(): 6.9e-47, 84.93% id in 146 aa; hypothetical protein 4360338 creA 2884941 creA Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051982.1 4359856 R 218491 CDS YP_051983.1 50122816 2884921 4360397..4360570 1 NC_004547.2 hypothetical protein 4360570 2884921 ECA3895 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051983.1 4360397 D 218491 CDS YP_051984.1 50122817 2885030 4360545..4361432 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri right origin-binding protein Rob or b4396 or z5999 or ecs5354 or sf4428 SWALL:ROB_ECOLI (SWALL:P27292) (289 aa) fasta scores: E(): 5e-81, 67.01% id in 288 aa; right origin-binding protein 4361432 rob 2885030 rob Pectobacterium atrosepticum SCRI1043 right origin-binding protein YP_051984.1 4360545 D 218491 CDS YP_051985.1 50122818 2885503 complement(4361421..4362071) 1 NC_004547.2 catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate; phosphoglycerate mutase 4362071 gpmB 2885503 gpmB Pectobacterium atrosepticum SCRI1043 phosphoglycerate mutase YP_051985.1 4361421 R 218491 CDS YP_051986.1 50122819 2884922 4362122..4362661 1 NC_004547.2 pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog; NTPase 4362661 2884922 ECA3898 Pectobacterium atrosepticum SCRI1043 NTPase YP_051986.1 4362122 D 218491 CDS YP_051987.1 50122820 2884237 complement(4362680..4363012) 1 NC_004547.2 When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription; Trp operon repressor 4363012 trpR 2884237 trpR Pectobacterium atrosepticum SCRI1043 Trp operon repressor YP_051987.1 4362680 R 218491 CDS YP_051988.1 50122821 2884382 complement(4363085..4365019) 1 NC_004547.2 catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan; lytic murein transglycosylase 4365019 slt 2884382 slt Pectobacterium atrosepticum SCRI1043 lytic murein transglycosylase YP_051988.1 4363085 R 218491 CDS YP_051989.1 50122822 2884792 4365488..4367155 1 NC_004547.2 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; ABC transporter ATP-binding protein 4367155 2884792 ECA3901 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_051989.1 4365488 D 218491 CDS YP_051990.1 50122823 2884793 complement(4367239..4368966) 1 NC_004547.2 Similar to Escherichia coli methyl-accepting chemotaxis protein III Trg or b1421 SWALL:MCP3_ECOLI (SWALL:P05704) (546 aa) fasta scores: E(): 2.9e-86, 54.69% id in 543 aa; methyl-accepting chemotaxis protein 4368966 2884793 ECA3902 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_051990.1 4367239 R 218491 CDS YP_051991.1 50122824 2884794 complement(4369195..4370100) 1 NC_004547.2 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa3135 SWALL:Q9HZ90 (EMBL:AE004737) (306 aa) fasta scores: E(): 4.1e-37, 38.92% id in 298 aa, and to Vibrio vulnificus transcriptional regulator vv21654 SWALL:AAO08512 (EMBL:AE016813) (307 aa) fasta scores: E(): 6.3e-35, 39.31% id in 290 aa; LysR family transcriptional regulator 4370100 2884794 ECA3903 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_051991.1 4369195 R 218491 CDS YP_051992.1 50122825 2884795 4370220..4371221 1 NC_004547.2 Similar to Rhizobium meliloti oxidoreductase transmembrane protein r01036 or smc02380 SWALL:Q92R74 (EMBL:AL591785) (337 aa) fasta scores: E(): 3.6e-52, 46.26% id in 335 aa, and to Xanthomonas axonopodis oxidoreductase xac1011 SWALL:Q8PNP3 (EMBL:AE011730) (340 aa) fasta scores: E(): 1.4e-50, 46.15% id in 338 aa; zinc-binding dehydrogenase 4371221 2884795 ECA3904 Pectobacterium atrosepticum SCRI1043 zinc-binding dehydrogenase YP_051992.1 4370220 D 218491 CDS YP_051993.1 50122826 2884402 complement(4371418..4372650) 1 NC_004547.2 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 4372650 serA 2884402 serA Pectobacterium atrosepticum SCRI1043 D-3-phosphoglycerate dehydrogenase YP_051993.1 4371418 R 218491 CDS YP_051994.1 50122827 2885022 complement(4372945..4373604) 1 NC_004547.2 Catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; ribose-5-phosphate isomerase A 4373604 rpiA 2885022 rpiA Pectobacterium atrosepticum SCRI1043 ribose-5-phosphate isomerase A YP_051994.1 4372945 R 218491 CDS YP_051995.1 50122828 2882858 4373843..4374736 1 NC_004547.2 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; chromosome replication initiation inhibitor protein 4374736 iciA 2882858 iciA Pectobacterium atrosepticum SCRI1043 chromosome replication initiation inhibitor protein YP_051995.1 4373843 D 218491 CDS YP_051996.1 50122829 2884730 complement(4374828..4375568) 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo0917 SWALL:Q8ZHH7 (EMBL:AJ414145) (259 aa) fasta scores: E(): 4.9e-63, 75.83% id in 240 aa, and to Edwardsiella ictaluri hypothetical protein YggE SWALL:YGGE_EDWIC (SWALL:O52400) (239 aa) fasta scores: E(): 3.8e-55, 67.78% id in 239 aa; hypothetical protein 4375568 2884730 ECA3908 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_051996.1 4374828 R 218491 CDS YP_051997.1 50122830 2884731 complement(4375759..4376373) 1 NC_004547.2 Involved in the export of arginine; arginine exporter protein 4376373 2884731 ECA3909 Pectobacterium atrosepticum SCRI1043 arginine exporter protein YP_051997.1 4375759 R 218491 CDS YP_051998.1 50122831 2884732 complement(4376580..4377440) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo0919 or y3306 SWALL:Q8ZHH5 (EMBL:AJ414145) (289 aa) fasta scores: E(): 4.8e-77, 74.04% id in 289 aa, and to Escherichia coli O6 hypothetical protein yggb yggb or c3502 SWALL:AAN81950 (EMBL:AE016766) (286 aa) fasta scores: E(): 5.8e-69, 69.03% id in 281 aa; mechanosensitive ion channel 4377440 2884732 ECA3910 Pectobacterium atrosepticum SCRI1043 mechanosensitive ion channel YP_051998.1 4376580 R 218491 CDS YP_051999.1 50122832 2883136 complement(4377564..4378640) 1 NC_004547.2 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 4378640 fbaA 2883136 fbaA Pectobacterium atrosepticum SCRI1043 fructose-bisphosphate aldolase YP_051999.1 4377564 R 218491 CDS YP_052000.1 50122833 2884904 complement(4378778..4379941) 1 NC_004547.2 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 4379941 pgk 2884904 pgk Pectobacterium atrosepticum SCRI1043 phosphoglycerate kinase YP_052000.1 4378778 R 218491 CDS YP_052001.1 50122834 2884534 complement(4380014..4381030) 1 NC_004547.2 NAD-dependent; catalyzes the formation of 4-phosphoerythronate from erythrose 4-phosphate in the biosynthesis of pyridoxine 5'-phosphate; erythrose 4-phosphate dehydrogenase 4381030 epd 2884534 epd Pectobacterium atrosepticum SCRI1043 erythrose 4-phosphate dehydrogenase YP_052001.1 4380014 R 218491 CDS YP_052002.1 50122835 2884276 complement(4381343..4383337) 1 NC_004547.2 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 4383337 tktA2 2884276 tktA2 Pectobacterium atrosepticum SCRI1043 transketolase YP_052002.1 4381343 R 218491 CDS YP_052003.1 50122836 2885001 4383748..4384500 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi zn-dependent proteases with possible chaperone function yggg or stm3077 or sty3237 SWALL:Q8XGA5 (EMBL:AE008841) (252 aa) fasta scores: E(): 2.5e-63, 71.88% id in 249 aa, and to Yersinia pestis lipoprotein ypo0927 SWALL:Q8ZHH0 (EMBL:AJ414145) (250 aa) fasta scores: E(): 1.3e-67, 76.4% id in 250 aa; peptidase 4384500 2885001 ECA3915 Pectobacterium atrosepticum SCRI1043 peptidase YP_052003.1 4383748 D 218491 CDS YP_052004.1 50122837 2885002 4385059..4385724 1 NC_004547.2 Similar to Escherichia coli genes, complete cds, strain:b171 SWALL:Q93RC7 (EMBL:AB052736) (143 aa) fasta scores: E(): 0.18, 27.04% id in 122 aa; LuxR family transcriptional regulator 4385724 2885002 ECA3917 Pectobacterium atrosepticum SCRI1043 LuxR family transcriptional regulator YP_052004.1 4385059 D 218491 CDS YP_052005.1 50122838 2884371 complement(4385783..4387762) 1 NC_004547.2 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 4387762 speA 2884371 speA Pectobacterium atrosepticum SCRI1043 arginine decarboxylase YP_052005.1 4385783 R 218491 CDS YP_052006.1 50122839 2885003 4388040..4388357 1 NC_004547.2 hypothetical protein 4388357 2885003 ECA3919 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052006.1 4388040 D 218491 CDS YP_052007.1 50122840 2883539 4388480..4389631 1 NC_004547.2 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 4389631 metK 2883539 metK Pectobacterium atrosepticum SCRI1043 S-adenosylmethionine synthetase YP_052007.1 4388480 D 218491 CDS YP_052008.1 50122841 2884365 4389952..4390464 1 NC_004547.2 Similar to Escherichia coli protein SprT or b2944 SWALL:SPRT_ECOLI (SWALL:P39902) (165 aa) fasta scores: E(): 4.5e-43, 68.51% id in 162 aa; hypothetical protein 4390464 sprT 2884365 sprT Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052008.1 4389952 D 218491 CDS YP_052009.1 50122842 2884892 4390561..4391259 1 NC_004547.2 Similar to Erwinia chrysanthemi nuclease NucM precursor NucM SWALL:NUCM_ERWCH (SWALL:P37994) (266 aa) fasta scores: E(): 7.3e-80, 78.69% id in 230 aa, and to Escherichia coli endonuclease I precursor enda or b2945 SWALL:END1_ECOLI (SWALL:P25736) (235 aa) fasta scores: E(): 6.3e-76, 74.02% id in 231 aa; endonuclease 4391259 nucM 2884892 nucM Pectobacterium atrosepticum SCRI1043 endonuclease YP_052009.1 4390561 D 218491 CDS YP_052010.1 50122843 2885709 4391555..4392289 1 NC_004547.2 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 4392289 2885709 ECA3923 Pectobacterium atrosepticum SCRI1043 16S ribosomal RNA methyltransferase RsmE YP_052010.1 4391555 D 218491 CDS YP_052011.1 50122844 2883841 4392301..4393260 1 NC_004547.2 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; glutathione synthetase 4393260 gshB 2883841 gshB Pectobacterium atrosepticum SCRI1043 glutathione synthetase YP_052011.1 4392301 D 218491 CDS YP_052012.1 50122845 2885710 4393344..4393907 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty3249 SWALL:Q8Z3V2 (EMBL:AL627277) (187 aa) fasta scores: E(): 8.8e-53, 71.65% id in 187 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri protein yqge or b2948 or c3534 or sf2939 SWALL:YQGE_ECOLI (SWALL:P52049) (187 aa) fasta scores: E(): 1.6e-52, 69.51% id in 187 aa; hypothetical protein 4393907 2885710 ECA3925 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052012.1 4393344 D 218491 CDS YP_052013.1 50122846 2885711 4393907..4394326 1 NC_004547.2 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 4394326 2885711 ECA3926 Pectobacterium atrosepticum SCRI1043 Holliday junction resolvase-like protein YP_052013.1 4393907 D 218491 CDS YP_052014.1 50122847 2883137 complement(4394430..4395434) 1 NC_004547.2 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 4395434 fbp 2883137 fbp Pectobacterium atrosepticum SCRI1043 fructose-1,6-bisphosphatase YP_052014.1 4394430 R 218491 CDS YP_052015.1 50122848 2881695 4395604..4396995 1 NC_004547.2 Similar to Escherichia coli UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diamino pimelate ligase Mpl or b4233 SWALL:MPL_ECOLI (SWALL:P37773) (457 aa) fasta scores: E(): 9.9e-158, 82.05% id in 457 aa; udp-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- me so-diaminopimelate ligase 4396995 mpl 2881695 mpl Pectobacterium atrosepticum SCRI1043 udp-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- me so-diaminopimelate ligase YP_052015.1 4395604 D 218491 CDS YP_052016.1 50122849 2881462 complement(4397095..4398393) 1 NC_004547.2 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 4398393 purA 2881462 purA Pectobacterium atrosepticum SCRI1043 adenylosuccinate synthetase YP_052016.1 4397095 R 218491 CDS YP_052017.1 50122850 2885712 complement(4398493..4398693) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo0377 SWALL:Q8ZIV8 (EMBL:AJ414142) (66 aa) fasta scores: E(): 4e-19, 78.46% id in 65 aa, and to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein yjet or b4176 or z5783 or ecs5152 or sf4331 SWALL:AAN45748 (EMBL:U14003) (65 aa) fasta scores: E(): 1.8e-17, 70.76% id in 65 aa; hypothetical protein 4398693 2885712 ECA3930 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052017.1 4398493 R 218491 CDS YP_052018.1 50122851 2885472 complement(4398820..4399815) 1 NC_004547.2 with HflK inhibits proteolysis of lambda cII protein by FtsH; FtsH protease regulator HflC 4399815 hflC 2885472 hflC Pectobacterium atrosepticum SCRI1043 FtsH protease regulator HflC YP_052018.1 4398820 R 218491 CDS YP_052019.1 50122852 2885473 complement(4399819..4401072) 1 NC_004547.2 with HflC inhibits proteolysis of lambda cII protein by FtsH; FtsH protease regulator HflK 4401072 hflK 2885473 hflK Pectobacterium atrosepticum SCRI1043 FtsH protease regulator HflK YP_052019.1 4399819 R 218491 CDS YP_052020.1 50122853 2885474 complement(4401165..4402445) 1 NC_004547.2 involved in modulation of proteins HflK and HflC; part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein; GTPase HflX 4402445 hflX 2885474 hflX Pectobacterium atrosepticum SCRI1043 GTPase HflX YP_052020.1 4401165 R 218491 CDS YP_052021.1 50122854 2885475 complement(4402540..4402839) 1 NC_004547.2 Stimulates the elongation of poly(A) tails; RNA-binding protein Hfq 4402839 hfq 2885475 hfq Pectobacterium atrosepticum SCRI1043 RNA-binding protein Hfq YP_052021.1 4402540 R 218491 CDS YP_052022.1 50122855 2883180 complement(4402952..4403893) 1 NC_004547.2 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 4403893 miaA 2883180 miaA Pectobacterium atrosepticum SCRI1043 tRNA delta(2)-isopentenylpyrophosphate transferase YP_052022.1 4402952 R 218491 CDS YP_052023.1 50122856 2882087 complement(4403886..4405841) 1 NC_004547.2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. Promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex; DNA mismatch repair protein 4405841 mutL 2882087 mutL Pectobacterium atrosepticum SCRI1043 DNA mismatch repair protein YP_052023.1 4403886 R 218491 CDS YP_052024.1 50122857 2884190 complement(4405893..4407563) 1 NC_004547.2 Similar to Escherichia coli N-acetylmuramoyl-L-alanine amidase AmiB precursor AmiB or b4169 SWALL:AMIB_ECOLI (SWALL:P26365) (445 aa) fasta scores: E(): 5.9e-74, 65.34% id in 430 aa; N-acetylmuramoyl-L-alanine amidase 4407563 amiB 2884190 amiB Pectobacterium atrosepticum SCRI1043 N-acetylmuramoyl-L-alanine amidase YP_052024.1 4405893 R 218491 CDS YP_052025.1 50122858 2885688 complement(4407560..4408042) 1 NC_004547.2 possibly involved in cell wall synthesis; ATPase 4408042 2885688 ECA3938 Pectobacterium atrosepticum SCRI1043 ATPase YP_052025.1 4407560 R 218491 CDS YP_052026.1 50122859 2885689 complement(4408062..4409618) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo0368 ypo0368 or y0625 SWALL:Q8ZIW7 (EMBL:AJ414142) (504 aa) fasta scores: E(): 6e-120, 62.13% id in 507 aa, and to Salmonella typhimurium sugar kinase yjef or stm4356 SWALL:Q8ZKA7 (EMBL:AE008904) (515 aa) fasta scores: E(): 1.1e-118, 62.32% id in 507 aa; hypothetical protein 4409618 2885689 ECA3939 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052026.1 4408062 R 218491 CDS YP_052027.1 50122860 2885690 4409761..4410900 1 NC_004547.2 Similar to Escherichia coli O6 electron transport protein yjes or c5250 SWALL:AAN83672 (EMBL:AE016771) (394 aa) fasta scores: E(): 1.2e-129, 80.73% id in 379 aa, and to Salmonella typhimurium fe-s protein yjes or stm4355 SWALL:Q8ZKA8 (EMBL:AE008904) (384 aa) fasta scores: E(): 7.6e-129, 79.94% id in 379 aa; 4Fe-4S binding protein 4410900 2885690 ECA3940 Pectobacterium atrosepticum SCRI1043 4Fe-4S binding protein YP_052027.1 4409761 D 218491 CDS YP_052028.1 50122861 2883202 complement(4411424..4413004) 1 NC_004547.2 Similar to Escherichia coli alkyl hydroperoxide reductase subunit F AhpF or b0606 SWALL:AHPF_ECOLI (SWALL:P35340) (521 aa) fasta scores: E(): 3.1e-149, 78.09% id in 525 aa; alkyl hydroperoxide reductase 4413004 ahpF 2883202 ahpF Pectobacterium atrosepticum SCRI1043 alkyl hydroperoxide reductase YP_052028.1 4411424 R 218491 CDS YP_052029.1 50122862 2883201 complement(4413135..4413698) 1 NC_004547.2 with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols; AhpC reduced the hydroperoxide substrate; alkyl hydroperoxide reductase 4413698 ahpC 2883201 ahpC Pectobacterium atrosepticum SCRI1043 alkyl hydroperoxide reductase YP_052029.1 4413135 R 218491 CDS YP_052030.1 50122863 2885739 complement(4413809..4415560) 1 NC_004547.2 Similar to Xanthomonas campestris hypothetical protein Xcc2749 SWALL:Q8P764 (EMBL:AE012388) (618 aa) fasta scores: E(): 1.9e-27, 29.05% id in 592 aa, and to Caulobacter crescentus hypothetical protein Cc3419 SWALL:Q9A2Y7 (EMBL:AE006002) (582 aa) fasta scores: E(): 2.8e-27, 28.7% id in 554 aa; hypothetical protein 4415560 2885739 ECA3943 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052030.1 4413809 R 218491 CDS YP_052031.1 50122864 2885740 complement(4415557..4415766) 1 NC_004547.2 Similar to Chilo iridescent virus 073r SWALL:Q91G35 (EMBL:AF303741) (67 aa) fasta scores: E(): 8.1, 26.98% id in 63 aa; phage-like protein 4415766 2885740 ECA3944 Pectobacterium atrosepticum SCRI1043 phage-like protein YP_052031.1 4415557 R 218491 CDS YP_052032.1 50122865 2885741 4415814..4416323 1 NC_004547.2 hypothetical protein 4416323 2885741 ECA3945 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052032.1 4415814 D 218491 CDS YP_052033.1 50122866 2885742 complement(4417003..4418481) 1 NC_004547.2 hypothetical protein 4418481 2885742 ECA3946 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052033.1 4417003 R 218491 CDS YP_052034.1 50122867 2885729 complement(4418704..4419630) 1 NC_004547.2 Similar to Pseudomonas putida D-isomer specific 2-hydroxyacid dehydrogenase family protein pp4589 SWALL:AAN70162 (EMBL:AE016791) (310 aa) fasta scores: E(): 4.3e-61, 56.63% id in 309 aa, and to Pseudomonas aeruginosa probable 2-hydroxyacid dehydrogenase pa1296 SWALL:Q9I448 (EMBL:AE004559) (310 aa) fasta scores: E(): 5.3e-54, 51.94% id in 308 aa; D-isomer specific 2-hydroxyacid dehydrogenase 4419630 2885729 ECA3947 Pectobacterium atrosepticum SCRI1043 D-isomer specific 2-hydroxyacid dehydrogenase YP_052034.1 4418704 R 218491 CDS YP_052035.1 50122868 2885730 complement(4419692..4420816) 1 NC_004547.2 hypothetical protein 4420816 2885730 ECA3948 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052035.1 4419692 R 218491 CDS YP_052036.1 50122869 2885731 complement(4420813..4421475) 1 NC_004547.2 hypothetical protein 4421475 2885731 ECA3949 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052036.1 4420813 R 218491 CDS YP_052037.1 50122870 2884030 complement(4421779..4422828) 1 NC_004547.2 Similar to Xylella fastidiosa alcohol dehydrogenase xf1746 SWALL:Q9PCN2 (EMBL:AE003997) (349 aa) fasta scores: E(): 3.1e-116, 84.81% id in 349 aa, and to Escherichia coli hypothetical zinc-type alcohol dehydrogenase-like protein yahk or b0325 SWALL:YAHK_ECOLI (SWALL:P75691) (349 aa) fasta scores: E(): 9.9e-111, 80.17% id in 348 aa; zinc-binding dehydrogenase 4422828 2884030 ECA3950 Pectobacterium atrosepticum SCRI1043 zinc-binding dehydrogenase YP_052037.1 4421779 R 218491 CDS YP_052038.1 50122871 2884031 complement(4423296..4423913) 1 NC_004547.2 Similar to Pseudomonas putida transporter, LysE family pp0699 SWALL:AAN66324 (EMBL:AE016776) (204 aa) fasta scores: E(): 5.4e-51, 66.01% id in 203 aa, and to Rhizobium meliloti amino acid efflux transmembrane protein r03051 or smc02484 SWALL:Q92LJ7 (EMBL:AL591792) (214 aa) fasta scores: E(): 1.5e-25, 39.8% id in 206 aa; LysE-type translocator 4423913 2884031 ECA3951 Pectobacterium atrosepticum SCRI1043 LysE-type translocator YP_052038.1 4423296 R 218491 CDS YP_052039.1 50122872 2884032 4424160..4425050 1 NC_004547.2 Similar to Pseudomonas putida transcriptional regulator, LysR family pp0698 SWALL:AAN66323 (EMBL:AE016776) (305 aa) fasta scores: E(): 3.1e-76, 64.93% id in 288 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 glycine cleavage system transcriptional activator gcva or b2808 or c3378 or z4125 or ecs3668 SWALL:GCVA_ECOLI (SWALL:P32064) (305 aa) fasta scores: E(): 6.4e-26, 33.67% id in 297 aa; LysR family transcriptional regulator 4425050 2884032 ECA3952 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_052039.1 4424160 D 218491 CDS YP_052040.1 50122873 2883805 4425070..4426236 1 NC_004547.2 Similar to Pseudomonas putida major facilitator family transporter pp0702 SWALL:AAN66327 (EMBL:AE016776) (385 aa) fasta scores: E(): 3.2e-42, 39.62% id in 371 aa, and to Rhizobium loti probable transporter mll1210 SWALL:Q98L25 (EMBL:AP002996) (393 aa) fasta scores: E(): 2.8e-21, 27.82% id in 381 aa; transporter 4426236 2883805 ECA3953 Pectobacterium atrosepticum SCRI1043 transporter YP_052040.1 4425070 D 218491 CDS YP_052041.1 50122874 2883806 complement(4426301..4427116) 1 NC_004547.2 Similar to Escherichia coli taurine transport ATP-binding protein TauB or ssib or b0366 SWALL:TAUB_ECOLI (SWALL:Q47538) (255 aa) fasta scores: E(): 2.6e-24, 36.82% id in 258 aa, and to Agrobacterium tumefaciens ABC transporter, nucleotide binding/ATPase protein atu0159 or agr_c_259 SWALL:Q8UIY2 (EMBL:AE008990) (266 aa) fasta scores: E(): 7.8e-26, 35.79% id in 257 aa; ABC transporter ATP-binding protein 4427116 2883806 ECA3954 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_052041.1 4426301 R 218491 CDS YP_052042.1 50122875 2883807 complement(4427116..4427880) 1 NC_004547.2 Similar to Rhizobium meliloti transport system permease ABC transporter protein r02573 or smc02345 SWALL:Q92MP0 (EMBL:AL591791) (287 aa) fasta scores: E(): 1e-24, 33.46% id in 245 aa, and to Pseudomonas putida ABC-type transporter membrane permease component TauC SWALL:Q8KZR5 (EMBL:AB086390) (279 aa) fasta scores: E(): 2e-19, 29.41% id in 255 aa; ABC transporter protein, membrane protein 4427880 2883807 ECA3955 Pectobacterium atrosepticum SCRI1043 ABC transporter protein, membrane protein YP_052042.1 4427116 R 218491 CDS YP_052043.1 50122876 2883808 complement(4427896..4428915) 1 NC_004547.2 Similar to Bacillus subtilis aliphatic sulfonates binding protein precursor SsuA SWALL:SSUA_BACSU (SWALL:P40400) (332 aa) fasta scores: E(): 8.5e-06, 23.17% id in 302 aa, and to Agrobacterium tumefaciens ABC transporter, substrate binding protein atu4154 or agr_l_1399 SWALL:Q8U8D8 (EMBL:AE009345) (338 aa) fasta scores: E(): 1.3e-07, 29.91% id in 224 aa; ABC transporter substrate binding protein 4428915 2883808 ECA3956 Pectobacterium atrosepticum SCRI1043 ABC transporter substrate binding protein YP_052043.1 4427896 R 218491 CDS YP_052044.1 50122877 2883732 complement(4429287..4429982) 1 NC_004547.2 Similar to Clostridium perfringens hypothetical protein Cpe0762 cpe0762 SWALL:Q8XMC7 (EMBL:AP003188) (230 aa) fasta scores: E(): 2.8e-26, 34.8% id in 227 aa, and to Bacillus subtilis YfnB yfnB SWALL:O06480 (EMBL:D86418) (235 aa) fasta scores: E(): 5e-24, 34.34% id in 230 aa; hydrolase 4429982 2883732 ECA3957 Pectobacterium atrosepticum SCRI1043 hydrolase YP_052044.1 4429287 R 218491 CDS YP_052045.1 50122878 2883733 complement(4429979..4431211) 1 NC_004547.2 Similar to Pseudomonas aeruginosa probable MFS transporter pa2314 SWALL:Q9I1G1 (EMBL:AE004657) (417 aa) fasta scores: E(): 2.2e-54, 44.2% id in 371 aa, and to Streptomyces capreolus hypothetical protein SWALL:CAD62207 (EMBL:X84374) (436 aa) fasta scores: E(): 8.2e-57, 44.53% id in 375 aa; transporter 4431211 2883733 ECA3958 Pectobacterium atrosepticum SCRI1043 transporter YP_052045.1 4429979 R 218491 CDS YP_052046.1 50122879 2883734 complement(4431399..4431722) 1 NC_004547.2 Similar to Lactococcus lactis transcription regulator yrfa or ll1694 SWALL:Q9CEY9 (EMBL:AE006400) (100 aa) fasta scores: E(): 2.1e-10, 39.78% id in 93 aa, and to Rhizobium loti hypothetical protein Mll3509 SWALL:Q98G33 (EMBL:AP003002) (100 aa) fasta scores: E(): 7.9e-11, 47.61% id in 84 aa; transcriptional regulator ArsR 4431722 2883734 ECA3959 Pectobacterium atrosepticum SCRI1043 transcriptional regulator ArsR YP_052046.1 4431399 R 218491 CDS YP_052047.1 50122880 2883545 4431770..4432609 1 NC_004547.2 Similar to Rhizobium loti hypothetical protein Mll5179 SWALL:Q98CE8 (EMBL:AP003005) (271 aa) fasta scores: E(): 1.5e-60, 55.72% id in 262 aa, and to Streptomyces coelicolor possible oxidoreductase sco0526 or scf11.06 SWALL:Q9RK83 (EMBL:AL939105) (277 aa) fasta scores: E(): 3.5e-44, 46.69% id in 257 aa; hydrolase 4432609 2883545 ECA3960 Pectobacterium atrosepticum SCRI1043 hydrolase YP_052047.1 4431770 D 218491 CDS YP_052048.1 50122881 2883546 4432620..4433255 1 NC_004547.2 Similar to Rhizobium loti hypothetical protein Mll1199 SWALL:Q98L32 (EMBL:AP002996) (204 aa) fasta scores: E(): 3.2e-11, 29.01% id in 193 aa, and to Rhizobium meliloti transcriptional regulator protein rb1009 or smb21569 SWALL:Q92US9 (EMBL:AL603645) (199 aa) fasta scores: E(): 1.1e-06, 27.55% id in 196 aa; hypothetical protein 4433255 2883546 ECA3961 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052048.1 4432620 D 218491 CDS YP_052049.1 50122882 2883547 complement(4433307..4433852) 1 NC_004547.2 hypothetical protein 4433852 2883547 ECA3962 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052049.1 4433307 R 218491 CDS YP_052050.1 50122883 2883548 complement(4433915..4434142) 1 NC_004547.2 hypothetical protein 4434142 2883548 ECA3963 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052050.1 4433915 R 218491 CDS YP_052051.1 50122884 2885561 complement(4434803..4435345) 1 NC_004547.2 3'-5' exoribonuclease specific for small oligoribonuclotides; oligoribonuclease 4435345 orn 2885561 orn Pectobacterium atrosepticum SCRI1043 oligoribonuclease YP_052051.1 4434803 R 218491 CDS YP_052052.1 50122885 2883514 4435653..4436702 1 NC_004547.2 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; ribosome-associated GTPase 4436702 2883514 ECA3965 Pectobacterium atrosepticum SCRI1043 ribosome-associated GTPase YP_052052.1 4435653 D 218491 CDS YP_052053.1 50122886 2882499 4436846..4437871 1 NC_004547.2 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; phosphatidylserine decarboxylase 4437871 psd 2882499 psd Pectobacterium atrosepticum SCRI1043 phosphatidylserine decarboxylase YP_052053.1 4436846 D 218491 CDS YP_052054.1 50122887 2885476 4437926..4441249 1 NC_004547.2 Similar to Erwinia chrysanthemi BspA protein precursor BspA SWALL:Q9EV03 (EMBL:AJ251781) (1106 aa) fasta scores: E(): 0, 77.97% id in 1108 aa, and to Yersinia pestis membrane transport protein ypo0363 or y0619 SWALL:AAM84207 (EMBL:AJ414142) (1119 aa) fasta scores: E(): 0, 71.54% id in 1114 aa; hypothetical protein 4441249 bspA 2885476 bspA Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052054.1 4437926 D 218491 CDS YP_052055.1 50122888 2885667 complement(4441333..4442310) 1 NC_004547.2 lysine--tRNA ligase beta chain; poxA; class II aminoacyl tRNA synthetase; catalyzes a two-step reaction; first charging a lysine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; lysyl-tRNA synthetase 4442310 poxA 2885667 poxA Pectobacterium atrosepticum SCRI1043 lysyl-tRNA synthetase YP_052055.1 4441333 R 218491 CDS YP_052056.1 50122889 2885172 4442783..4444579 1 NC_004547.2 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 4444579 frdA 2885172 frdA Pectobacterium atrosepticum SCRI1043 fumarate reductase flavoprotein subunit YP_052056.1 4442783 D 218491 CDS YP_052057.1 50122890 2885173 4444572..4445309 1 NC_004547.2 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 4445309 frdB 2885173 frdB Pectobacterium atrosepticum SCRI1043 fumarate reductase iron-sulfur subunit YP_052057.1 4444572 D 218491 CDS YP_052058.1 50122891 2885063 4445320..4445718 1 NC_004547.2 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase subunit C 4445718 frdC 2885063 frdC Pectobacterium atrosepticum SCRI1043 fumarate reductase subunit C YP_052058.1 4445320 D 218491 CDS YP_052059.1 50122892 2885064 4445733..4446089 1 NC_004547.2 in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane; fumarate reductase subunit D 4446089 frdD 2885064 frdD Pectobacterium atrosepticum SCRI1043 fumarate reductase subunit D YP_052059.1 4445733 D 218491 CDS YP_052060.1 50122893 2882502 4446212..4446796 1 NC_004547.2 lipocalin; globomycin-sensitive outer membrane lipoprotein; outer membrane lipoprotein Blc 4446796 blc 2882502 blc Pectobacterium atrosepticum SCRI1043 outer membrane lipoprotein Blc YP_052060.1 4446212 D 218491 CDS YP_052061.1 50122894 2883515 complement(4446837..4447190) 1 NC_004547.2 Similar to Shewanella oneidensis conserved hypothetical protein so1373 SWALL:AAN54438 (EMBL:AE015581) (116 aa) fasta scores: E(): 9.4e-33, 68.42% id in 114 aa, and to Vibrio cholerae hypothetical protein Vc1574 SWALL:Q9KRR2 (EMBL:AE004235) (127 aa) fasta scores: E(): 4.2e-32, 66.66% id in 114 aa; hypothetical protein 4447190 2883515 ECA3974 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052061.1 4446837 R 218491 CDS YP_052062.1 50122895 2881724 complement(4447304..4447435) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri entericidin B precursor EcnB or b4147.2 or c5235 or z5754 or ecs5128.2 or sf4305 SWALL:ECNB_ECOLI (SWALL:P56549) (48 aa) fasta scores: E(): 2.8e-06, 61.53% id in 39 aa; entericidin B 4447435 ecnB 2881724 ecnB Pectobacterium atrosepticum SCRI1043 entericidin B YP_052062.1 4447304 R 218491 CDS YP_052063.1 50122896 2881722 complement(4447619..4448185) 1 NC_004547.2 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 4448185 efp 2881722 efp Pectobacterium atrosepticum SCRI1043 elongation factor P YP_052063.1 4447619 R 218491 CDS YP_052064.1 50122897 2883516 4448227..4449270 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo0353 or y0611 SWALL:Q8ZIY1 (EMBL:AJ414142) (342 aa) fasta scores: E(): 1e-110, 80.11% id in 342 aa, and to Escherichia coli O6 hypothetical protein yjek or c5231 SWALL:AAN83653 (EMBL:AE016771) (342 aa) fasta scores: E(): 7.7e-107, 75.73% id in 342 aa; hypothetical protein 4449270 2883516 ECA3977 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052064.1 4448227 D 218491 CDS YP_052065.1 50122898 2883477 complement(4449335..4449679) 1 NC_004547.2 Similar to Yersinia pestis lipoprotein ypo0352 SWALL:Q8ZIY2 (EMBL:AJ414142) (128 aa) fasta scores: E(): 4.4e-29, 71.93% id in 114 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri hypothetical protein yjei precursor yjei or b4144 or c5228 or sf4298 SWALL:YJEI_ECOLI (SWALL:P39278) (117 aa) fasta scores: E(): 9.7e-24, 60.34% id in 116 aa; lipoprotein 4449679 2883477 ECA3978 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_052065.1 4449335 R 218491 CDS YP_052066.1 50122899 2885797 complement(4449723..4451372) 1 NC_004547.2 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 4451372 pgi 2885797 pgi Pectobacterium atrosepticum SCRI1043 glucose-6-phosphate isomerase YP_052066.1 4449723 R 218491 CDS YP_052067.1 50122900 2883478 complement(4451528..4451728) 1 NC_004547.2 hypothetical protein 4451728 2883478 ECA3980 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052067.1 4451528 R 218491 CDS YP_052068.1 50122901 2882264 4451863..4453239 1 NC_004547.2 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; aspartate kinase 4453239 lysC 2882264 lysC Pectobacterium atrosepticum SCRI1043 aspartate kinase YP_052068.1 4451863 D 218491 CDS YP_052069.1 50122902 2883479 4453357..4453578 1 NC_004547.2 hypothetical protein 4453578 2883479 ECA3982 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052069.1 4453357 D 218491 CDS YP_052070.1 50122903 2883373 complement(4453595..4455241) 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein yjbb or c4979 SWALL:AAN83405 (EMBL:AE016770) (543 aa) fasta scores: E(): 3.1e-138, 69.24% id in 543 aa, and to Salmonella typhimurium hypothetical protein yjbb or stm4189 SWALL:YJBB_SALTY (SWALL:P40730) (543 aa) fasta scores: E(): 4.1e-138, 69.98% id in 543 aa; sodium/phosphate cotransporter 4455241 2883373 ECA3983 Pectobacterium atrosepticum SCRI1043 sodium/phosphate cotransporter YP_052070.1 4453595 R 218491 CDS YP_052071.1 50122904 2883374 4455549..4457003 1 NC_004547.2 Similar to Salmonella typhi possible membrane transport protein sty3340 SWALL:Q8Z3Q1 (EMBL:AL627277) (484 aa) fasta scores: E(): 4e-162, 82.02% id in 484 aa, and to Clostridium acetobutylicum 2-oxoglutarate/malate translocator cac1590 SWALL:Q97IQ0 (EMBL:AE007668) (476 aa) fasta scores: E(): 6.8e-87, 46.57% id in 481 aa; sodium:sulfate symporter 4457003 2883374 ECA3984 Pectobacterium atrosepticum SCRI1043 sodium:sulfate symporter YP_052071.1 4455549 D 218491 CDS YP_052072.1 50122905 2885080 complement(4457075..4459180) 1 NC_004547.2 Similar to Salmonella typhimurium ferrioxamine B receptor precursor fFoxA or stm0364 SWALL:FOXA_SALTY (SWALL:Q56145) (702 aa) fasta scores: E(): 1.8e-207, 74.35% id in 702 aa; ferrioxamine B receptor 4459180 foxA 2885080 foxA Pectobacterium atrosepticum SCRI1043 ferrioxamine B receptor YP_052072.1 4457075 R 218491 CDS YP_052073.1 50122906 2883375 complement(4459373..4460329) 1 NC_004547.2 Similar to Bordetella pertussis AlcR SWALL:O52066 (EMBL:AF018255) (324 aa) fasta scores: E(): 1.6e-31, 38.85% id in 314 aa, and to Salmonella typhi AraC-family transcriptional regulator sty0395 SWALL:Q8Z909 (EMBL:AL627266) (334 aa) fasta scores: E(): 2.3e-66, 57.72% id in 317 aa; AraC family transcriptional regulator 4460329 2883375 ECA3986 Pectobacterium atrosepticum SCRI1043 AraC family transcriptional regulator YP_052073.1 4459373 R 218491 CDS YP_052074.1 50122907 2883939 complement(4460847..4464530) 1 NC_004547.2 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; B12-dependent methionine synthase 4464530 metH 2883939 metH Pectobacterium atrosepticum SCRI1043 B12-dependent methionine synthase YP_052074.1 4460847 R 218491 CDS YP_052075.1 50122908 2882763 4464724..4465554 1 NC_004547.2 regulates the glyoxylate bypass operon (aceBAK), which encodes isocitrate lyase, malate synthase and isocitrate dehydrogenase kinase/phosphorylase; IclR family transcriptional regulator 4465554 iclR 2882763 iclR Pectobacterium atrosepticum SCRI1043 IclR family transcriptional regulator YP_052075.1 4464724 D 218491 CDS YP_052076.1 50122909 2884796 complement(4465850..4467628) 1 NC_004547.2 catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; bifunctional isocitrate dehydrogenase kinase/phosphatase protein 4467628 aceK 2884796 aceK Pectobacterium atrosepticum SCRI1043 bifunctional isocitrate dehydrogenase kinase/phosphatase protein YP_052076.1 4465850 R 218491 CDS YP_052077.1 50122910 2885205 complement(4467675..4468982) 1 NC_004547.2 Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; isocitrate lyase 4468982 aceA 2885205 aceA Pectobacterium atrosepticum SCRI1043 isocitrate lyase YP_052077.1 4467675 R 218491 CDS YP_052078.1 50122911 2884500 complement(4469014..4470612) 1 NC_004547.2 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; malate synthase 4470612 aceB 2884500 aceB Pectobacterium atrosepticum SCRI1043 malate synthase YP_052078.1 4469014 R 218491 CDS YP_052079.1 50122912 2883957 complement(4470898..4471827) 1 NC_004547.2 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 4471827 metA 2883957 metA Pectobacterium atrosepticum SCRI1043 homoserine O-succinyltransferase YP_052079.1 4470898 R 218491 CDS YP_052080.1 50122913 2883376 4477982..4478530 1 NC_004547.2 Similar to Yersinia pestis transferase y4029 SWALL:AAM87573 (EMBL:AE014004) (193 aa) fasta scores: E(): 3.4e-50, 76.3% id in 173 aa, and to Salmonella typhi transferase yrda or sty4398 SWALL:Q8Z1W3 (EMBL:AL627282) (184 aa) fasta scores: E(): 6.7e-50, 74.43% id in 176 aa; transferase 4478530 2883376 ECA3993 Pectobacterium atrosepticum SCRI1043 transferase YP_052080.1 4477982 D 218491 CDS YP_052081.1 50122914 2883331 complement(4478515..4478772) 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein yrdb or sty4397 SWALL:Q8Z1W4 (EMBL:AL627282) (85 aa) fasta scores: E(): 1.2e-18, 58.82% id in 85 aa, and to Escherichia coli hypothetical protein yrdb or b3280 SWALL:YRDB_ECOLI (SWALL:P45795) (85 aa) fasta scores: E(): 1.7e-18, 58.02% id in 81 aa; hypothetical protein 4478772 2883331 ECA3994 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052081.1 4478515 R 218491 CDS YP_052082.1 50122915 2884134 complement(4478769..4479596) 1 NC_004547.2 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 4479596 aroE 2884134 aroE Pectobacterium atrosepticum SCRI1043 shikimate 5-dehydrogenase YP_052082.1 4478769 R 218491 CDS YP_052083.1 50122916 2883332 complement(4479616..4480734) 1 NC_004547.2 Similar to Shigella flexneri DNA topoisomerase yrdd or sf3315 SWALL:AAN44778 (EMBL:AE015342) (180 aa) fasta scores: E(): 8.8e-54, 72.77% id in 180 aa, and to Salmonella typhi hypothetical protein yrdd or sty4394 SWALL:Q8Z1W7 (EMBL:AL627282) (180 aa) fasta scores: E(): 8.1e-53, 70% id in 180 aa; DNA topoisomerase 4480734 2883332 ECA3996 Pectobacterium atrosepticum SCRI1043 DNA topoisomerase YP_052083.1 4479616 R 218491 CDS YP_052084.1 50122917 2884379 complement(4480755..4481228) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri protein Smg or b3284 or sf3316 SWALL:SMG_ECOLI (SWALL:P30853) (157 aa) fasta scores: E(): 6.6e-48, 76.43% id in 157 aa, and to Salmonella typhimurium, and Salmonella typhi Smg protein homolog Smg or stm3404 or sty4393 or t4100 SWALL:SMG_SALTY (SWALL:Q8XFK8) (157 aa) fasta scores: E(): 8.8e-49, 78.34% id in 157 aa; hypothetical protein 4481228 smg 2884379 smg Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052084.1 4480755 R 218491 CDS YP_052085.1 50122918 2884385 complement(4481200..4482321) 1 NC_004547.2 Similar to Escherichia coli Smf protein Smf or b3285/b3286 SWALL:SMF_ECOLI (SWALL:P30852) (374 aa) fasta scores: E(): 1.5e-79, 57.75% id in 374 aa, and to Yersinia pestis hypothetical protein ypo0243 ypo0243 or Smf1 or y4024 SWALL:Q8ZJ78 (EMBL:AJ414141) (373 aa) fasta scores: E(): 1.6e-82, 60.32% id in 373 aa; DNA protecting protein DprA 4482321 smf 2884385 smf Pectobacterium atrosepticum SCRI1043 DNA protecting protein DprA YP_052085.1 4481200 R 218491 CDS YP_052086.1 50122919 2881920 4482450..4482959 1 NC_004547.2 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 4482959 def 2881920 def Pectobacterium atrosepticum SCRI1043 peptide deformylase YP_052086.1 4482450 D 218491 CDS YP_052087.1 50122920 2882537 4482986..4483933 1 NC_004547.2 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 4483933 fmt 2882537 fmt Pectobacterium atrosepticum SCRI1043 methionyl-tRNA formyltransferase YP_052087.1 4482986 D 218491 CDS YP_052088.1 50122921 2884326 4484001..4485290 1 NC_004547.2 catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA; SAM-dependent methyltransferase; 16S rRNA methyltransferase GidB 4485290 sun 2884326 sun Pectobacterium atrosepticum SCRI1043 16S rRNA methyltransferase GidB YP_052088.1 4484001 D 218491 CDS YP_052089.1 50122922 2884247 4485347..4486723 1 NC_004547.2 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; potassium transporter peripheral membrane protein 4486723 trkA 2884247 trkA Pectobacterium atrosepticum SCRI1043 potassium transporter peripheral membrane protein YP_052089.1 4485347 D 218491 CDS YP_052090.1 50122923 2881208 4486815..4487225 1 NC_004547.2 forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; large-conductance mechanosensitive channel 4487225 mscL 2881208 mscL Pectobacterium atrosepticum SCRI1043 large-conductance mechanosensitive channel YP_052090.1 4486815 D 218491 CDS YP_052091.1 50122924 2883333 complement(4487256..4487468) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo0237 or y4018 SWALL:Q8ZJ84 (EMBL:AJ414141) (66 aa) fasta scores: E(): 3.9e-18, 74.24% id in 66 aa, and to Escherichia coli hypothetical protein yhdl or b3291.1 SWALL:YHDL_ECOLI (SWALL:P36675) (72 aa) fasta scores: E(): 4.3e-16, 60.87% id in 69 aa; hypothetical protein 4487468 2883333 ECA4004 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052091.1 4487256 R 218491 CDS YP_052092.1 50122925 2883617 complement(4487676..4488068) 1 NC_004547.2 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 4488068 rplQ 2883617 rplQ Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L17 YP_052092.1 4487676 R 218491 CDS YP_052093.1 50122926 2884488 complement(4488109..4489098) 1 NC_004547.2 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 4489098 rpoA 2884488 rpoA Pectobacterium atrosepticum SCRI1043 DNA-directed RNA polymerase subunit alpha YP_052093.1 4488109 R 218491 CDS YP_052094.1 50122927 2884474 complement(4489124..4489744) 1 NC_004547.2 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 4489744 rpsD 2884474 rpsD Pectobacterium atrosepticum SCRI1043 30S ribosomal protein S4 YP_052094.1 4489124 R 218491 CDS YP_052095.1 50122928 2884469 complement(4489775..4490164) 1 NC_004547.2 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 4490164 rpsK 2884469 rpsK Pectobacterium atrosepticum SCRI1043 30S ribosomal protein S11 YP_052095.1 4489775 R 218491 CDS YP_052096.1 50122929 2884464 complement(4490181..4490537) 1 NC_004547.2 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 4490537 rpsM 2884464 rpsM Pectobacterium atrosepticum SCRI1043 30S ribosomal protein S13 YP_052096.1 4490181 R 218491 CDS YP_052097.1 50122930 2884492 complement(4490684..4490800) 1 NC_004547.2 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group have the motif; 50S ribosomal protein L36 4490800 rpmJ 2884492 rpmJ Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L36 YP_052097.1 4490684 R 218491 CDS YP_052098.1 50122931 2884406 complement(4490834..4492165) 1 NC_004547.2 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 4492165 secY 2884406 secY Pectobacterium atrosepticum SCRI1043 preprotein translocase subunit SecY YP_052098.1 4490834 R 218491 CDS YP_052099.1 50122932 2883748 complement(4492173..4492607) 1 NC_004547.2 late assembly protein; 50S ribosomal protein L15 4492607 rplO 2883748 rplO Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L15 YP_052099.1 4492173 R 218491 CDS YP_052100.1 50122933 2883081 complement(4492611..4492790) 1 NC_004547.2 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; 50S ribosomal protein L30 4492790 rpmD 2883081 rpmD Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L30 YP_052100.1 4492611 R 218491 CDS YP_052101.1 50122934 2884475 complement(4492797..4493297) 1 NC_004547.2 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 4493297 rpsE 2884475 rpsE Pectobacterium atrosepticum SCRI1043 30S ribosomal protein S5 YP_052101.1 4492797 R 218491 CDS YP_052102.1 50122935 2883618 complement(4493312..4493665) 1 NC_004547.2 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 4493665 rplR 2883618 rplR Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L18 YP_052102.1 4493312 R 218491 CDS YP_052103.1 50122936 2883966 complement(4493675..4494208) 1 NC_004547.2 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 4494208 rplF 2883966 rplF Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L6 YP_052103.1 4493675 R 218491 CDS YP_052104.1 50122937 2884472 complement(4494222..4494614) 1 NC_004547.2 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 4494614 rpsH 2884472 rpsH Pectobacterium atrosepticum SCRI1043 30S ribosomal protein S8 YP_052104.1 4494222 R 218491 CDS YP_052105.1 50122938 2884465 complement(4494648..4494953) 1 NC_004547.2 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; 30S ribosomal protein S14 4494953 rpsN 2884465 rpsN Pectobacterium atrosepticum SCRI1043 30S ribosomal protein S14 YP_052105.1 4494648 R 218491 CDS YP_052106.1 50122939 2885021 complement(4494967..4495506) 1 NC_004547.2 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 4495506 rplE 2885021 rplE Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L5 YP_052106.1 4494967 R 218491 CDS YP_052107.1 50122940 2883130 complement(4495521..4495835) 1 NC_004547.2 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 4495835 rplX 2883130 rplX Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L24 YP_052107.1 4495521 R 218491 CDS YP_052108.1 50122941 2883747 complement(4495846..4496217) 1 NC_004547.2 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 4496217 rplN 2883747 rplN Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L14 YP_052108.1 4495846 R 218491 CDS YP_052109.1 50122942 2884461 complement(4496381..4496635) 1 NC_004547.2 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 4496635 rpsQ 2884461 rpsQ Pectobacterium atrosepticum SCRI1043 30S ribosomal protein S17 YP_052109.1 4496381 R 218491 CDS YP_052110.1 50122943 2883080 complement(4496635..4496826) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 50S ribosomal protein L29 RpmC or b3312 or c4077 or z4683 or ecs4177 SWALL:RL29_ECOLI (SWALL:P02429) (63 aa) fasta scores: E(): 2.5e-18, 84.12% id in 63 aa; 50S ribosomal protein L29 4496826 rpmC 2883080 rpmC Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L29 YP_052110.1 4496635 R 218491 CDS YP_052111.1 50122944 2883749 complement(4496826..4497236) 1 NC_004547.2 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 4497236 rplP 2883749 rplP Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L16 YP_052111.1 4496826 R 218491 CDS YP_052112.1 50122945 2884479 complement(4497249..4497950) 1 NC_004547.2 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 4497950 rpsC 2884479 rpsC Pectobacterium atrosepticum SCRI1043 30S ribosomal protein S3 YP_052112.1 4497249 R 218491 CDS YP_052113.1 50122946 2883229 complement(4497968..4498300) 1 NC_004547.2 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 4498300 rplV 2883229 rplV Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L22 YP_052113.1 4497968 R 218491 CDS YP_052114.1 50122947 2884463 complement(4498315..4498593) 1 NC_004547.2 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 4498593 rpsS 2884463 rpsS Pectobacterium atrosepticum SCRI1043 30S ribosomal protein S19 YP_052114.1 4498315 R 218491 CDS YP_052115.1 50122948 2885025 complement(4498610..4499431) 1 NC_004547.2 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 4499431 rplB 2885025 rplB Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L2 YP_052115.1 4498610 R 218491 CDS YP_052116.1 50122949 2883230 complement(4499449..4499751) 1 NC_004547.2 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 4499751 rplW 2883230 rplW Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L23 YP_052116.1 4499449 R 218491 CDS YP_052117.1 50122950 2885020 complement(4499748..4500353) 1 NC_004547.2 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 4500353 rplD 2885020 rplD Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L4 YP_052117.1 4499748 R 218491 CDS YP_052118.1 50122951 2885019 complement(4500364..4500993) 1 NC_004547.2 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 4500993 rplC 2885019 rplC Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L3 YP_052118.1 4500364 R 218491 CDS YP_052119.1 50122952 2884468 complement(4501026..4501337) 1 NC_004547.2 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 4501337 rpsJ 2884468 rpsJ Pectobacterium atrosepticum SCRI1043 30S ribosomal protein S10 YP_052119.1 4501026 R 218491 CDS YP_052120.1 50122953 2882018 complement(4501644..4502117) 1 NC_004547.2 iron storage protein; bacterioferritin 4502117 bfr 2882018 bfr Pectobacterium atrosepticum SCRI1043 bacterioferritin YP_052120.1 4501644 R 218491 CDS YP_052121.1 50122954 2881645 complement(4502190..4502384) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 bacterioferritin-associated ferredoxin Bfd or b3337 or c4108 SWALL:BFD_ECOLI (SWALL:P13655) (64 aa) fasta scores: E(): 4.1e-13, 56.25% id in 64 aa; bacterioferritin-associated ferredoxin 4502384 bfd 2881645 bfd Pectobacterium atrosepticum SCRI1043 bacterioferritin-associated ferredoxin YP_052121.1 4502190 R 218491 CDS YP_052122.1 50122955 2884227 complement(4502588..4503772) 1 NC_004547.2 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 4503772 tuf 2884227 tuf Pectobacterium atrosepticum SCRI1043 elongation factor Tu YP_052122.1 4502588 R 218491 CDS YP_052123.1 50122956 2883271 complement(4503842..4505956) 1 NC_004547.2 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 4505956 fusA 2883271 fusA Pectobacterium atrosepticum SCRI1043 elongation factor G YP_052123.1 4503842 R 218491 CDS YP_052124.1 50122957 2884471 complement(4506053..4506523) 1 NC_004547.2 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 4506523 rpsG 2884471 rpsG Pectobacterium atrosepticum SCRI1043 30S ribosomal protein S7 YP_052124.1 4506053 R 218491 CDS YP_052125.1 50122958 2884470 complement(4506620..4506994) 1 NC_004547.2 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 4506994 rpsL 2884470 rpsL Pectobacterium atrosepticum SCRI1043 30S ribosomal protein S12 YP_052125.1 4506620 R 218491 CDS YP_052126.1 50122959 2881854 complement(4507126..4507413) 1 NC_004547.2 Similar to Chromatium vinosum DsrH SWALL:O87898 (EMBL:U84760) (102 aa) fasta scores: E(): 3.5e-05, 32.32% id in 99 aa, and to Escherichia coli hypothetical protein yhel or b3343 SWALL:YHEL_ECOLI (SWALL:P45530) (95 aa) fasta scores: E(): 1.1e-14, 52.63% id in 95 aa; intracellular sulfur oxidation protein 4507413 dsrH 2881854 dsrH Pectobacterium atrosepticum SCRI1043 intracellular sulfur oxidation protein YP_052126.1 4507126 R 218491 CDS YP_052127.1 50122960 2885431 complement(4507432..4507791) 1 NC_004547.2 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur relay protein TusC 4507791 dsrF 2885431 dsrF Pectobacterium atrosepticum SCRI1043 sulfur relay protein TusC YP_052127.1 4507432 R 218491 CDS YP_052128.1 50122961 2885430 complement(4507801..4508190) 1 NC_004547.2 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; sulfur transfer complex subunit TusD 4508190 dsrE 2885430 dsrE Pectobacterium atrosepticum SCRI1043 sulfur transfer complex subunit TusD YP_052128.1 4507801 R 218491 CDS YP_052129.1 50122962 2883305 complement(4508190..4508912) 1 NC_004547.2 Similar to Yersinia pestis DNA-binding protein ypo0196 or y3978 SWALL:Q8ZJB9 (EMBL:AJ414141) (244 aa) fasta scores: E(): 1.9e-82, 90.41% id in 240 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri hypothetical protein yheo or b3346 or c4120 or sf3364 SWALL:YHEO_ECOLI (SWALL:P45533) (240 aa) fasta scores: E(): 9.4e-80, 85.83% id in 240 aa; DNA-binding protein 4508912 2883305 ECA4042 Pectobacterium atrosepticum SCRI1043 DNA-binding protein YP_052129.1 4508190 R 218491 CDS YP_052130.1 50122963 2883274 4509286..4510932 1 NC_004547.2 with ZipA and an unidentified 24 kDa protein forms a complex involved in cell division; cell division protein 4510932 pmrC 2883274 pmrC Pectobacterium atrosepticum SCRI1043 cell division protein YP_052130.1 4509286 D 218491 CDS YP_052131.1 50122964 2883303 4510929..4511597 1 NC_004547.2 response regulator in two-component regulatory system with BasS; DNA-binding transcriptional regulator BasR 4511597 pmrA 2883303 pmrA Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional regulator BasR YP_052131.1 4510929 D 218491 CDS YP_052132.1 50122965 2883304 4511594..4512688 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum sensor kinase PmrB SWALL:CAE47080 (EMBL:AJ583007) (364 aa) fasta scores: E(): 1.5e-125, 94.78% id in 364 aa, and to Escherichia coli sensor protein BasS or PmrB or b4112 SWALL:BASS_ECOLI (SWALL:P30844) (363 aa) fasta scores: E(): 9.5e-69, 58.64% id in 353 aa; sensor protein BasS/PmrB 4512688 pmrB 2883304 pmrB Pectobacterium atrosepticum SCRI1043 sensor protein BasS/PmrB YP_052132.1 4511594 D 218491 CDS YP_052133.1 50122966 2883306 complement(4512740..4514011) 1 NC_004547.2 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 4514011 glyA 2883306 glyA Pectobacterium atrosepticum SCRI1043 serine hydroxymethyltransferase YP_052133.1 4512740 R 218491 CDS YP_052134.1 50122967 2883307 complement(4514044..4514856) 1 NC_004547.2 Similar to Xylella fastidiosa hypothetical protein Xf1717 SWALL:Q9PCR1 (EMBL:AE003995) (266 aa) fasta scores: E(): 5.6e-63, 71% id in 238 aa, and to Pseudomonas aeruginosa hypothetical upf0001 protein Pa0394 SWALL:Y394_PSEAE (SWALL:P24562) (230 aa) fasta scores: E(): 5.9e-29, 47.34% id in 226 aa; alanine racemase 4514856 2883307 ECA4047 Pectobacterium atrosepticum SCRI1043 alanine racemase YP_052134.1 4514044 R 218491 CDS YP_052135.1 50122968 2883308 4514960..4516456 1 NC_004547.2 Similar to Pseudomonas aeruginosa probable transcriptional regulator pa4165 SWALL:Q9HWL6 (EMBL:AE004833) (496 aa) fasta scores: E(): 9.5e-124, 66.59% id in 500 aa, and to Salmonella typhi gntr-family regulatory protein sty3762 SWALL:Q8Z301 (EMBL:AL627279) (493 aa) fasta scores: E(): 2.7e-66, 45.43% id in 493 aa; GntR family transcriptional regulator 4516456 2883308 ECA4048 Pectobacterium atrosepticum SCRI1043 GntR family transcriptional regulator YP_052135.1 4514960 D 218491 CDS YP_052136.1 50122969 2882210 complement(4516657..4517475) 1 NC_004547.2 rotamase; FKBP-type peptidyl-prolyl cis-trans isomerase 4517475 fkpA 2882210 fkpA Pectobacterium atrosepticum SCRI1043 FKBP-type peptidyl-prolyl cis-trans isomerase YP_052136.1 4516657 R 218491 CDS YP_052137.1 50122970 2884384 4517758..4517976 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 SlyX protein slyx or b3348 or c4122 or z4706 or ecs4199 SWALL:SLYX_ECOLI (SWALL:P30857) (72 aa) fasta scores: E(): 5.2e-12, 59.72% id in 72 aa, and to Yersinia pestis host factor for lysis of phix174 infection SlyX or y3976 SWALL:AAM87520 (EMBL:AE014001) (72 aa) fasta scores: E(): 1.5e-13, 63.88% id in 72 aa; hypothetical protein 4517976 slyX 2884384 slyX Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052137.1 4517758 D 218491 CDS YP_052138.1 50122971 2883111 complement(4518081..4518446) 1 NC_004547.2 Similar to Xanthomonas campestris hypothetical protein Xcc0062 SWALL:Q8PEB9 (EMBL:AE012100) (116 aa) fasta scores: E(): 3.8e-29, 75.47% id in 106 aa, and to Rhizobium loti hypothetical protein Mll3985 SWALL:Q98F15 (EMBL:AP003003) (137 aa) fasta scores: E(): 3.7e-28, 76.47% id in 102 aa; transcriptional regulator 4518446 2883111 ECA4051 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_052138.1 4518081 R 218491 CDS YP_052139.1 50122972 2883112 4518538..4518864 1 NC_004547.2 Similar to Rhizobium loti hypothetical protein Mlr3986 SWALL:Q98F14 (EMBL:AP003003) (109 aa) fasta scores: E(): 1.3e-15, 47.22% id in 108 aa, and to Agrobacterium tumefaciens hypothetical protein atu5209 or agr_pat_291 SWALL:Q8UKB4 (EMBL:AE008943) (109 aa) fasta scores: E(): 1.4e-12, 40.18% id in 107 aa; hypothetical protein 4518864 2883112 ECA4052 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052139.1 4518538 D 218491 CDS YP_052140.1 50122973 2883113 4518864..4519643 1 NC_004547.2 Similar to Agrobacterium tumefaciens dehydrogenase atu5210 or agr_pat_293 SWALL:Q8UKB3 (EMBL:AE008943) (259 aa) fasta scores: E(): 9.5e-62, 65.11% id in 258 aa, and to Rhizobium meliloti sma1629 protein ra0888 or sma1629 SWALL:Q92YJ2 (EMBL:AE007275) (259 aa) fasta scores: E(): 1.4e-64, 70.86% id in 254 aa; short chain dehydrogenase 4519643 2883113 ECA4053 Pectobacterium atrosepticum SCRI1043 short chain dehydrogenase YP_052140.1 4518864 D 218491 CDS YP_052141.1 50122974 2884383 complement(4519847..4520431) 1 NC_004547.2 rotamase; FKBP-type peptidylprolyl isomerase 4520431 slyD 2884383 slyD Pectobacterium atrosepticum SCRI1043 FKBP-type peptidylprolyl isomerase YP_052141.1 4519847 R 218491 CDS YP_052142.1 50122975 2883027 complement(4520552..4520758) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo0192 or y3973 SWALL:Q8ZJC3 (EMBL:AJ414141) (73 aa) fasta scores: E(): 1.2e-12, 60% id in 65 aa, and to Shigella flexneri orf, conserved hypothetical protein yhev or sf3368 SWALL:AAN44831 (EMBL:AE015345) (66 aa) fasta scores: E(): 4.4e-11, 50% id in 64 aa; hypothetical protein 4520758 2883027 ECA4055 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052142.1 4520552 R 218491 CDS YP_052143.1 50122976 2885696 complement(4520816..4522627) 1 NC_004547.2 involved in potassium efflux; glutathione-regulated potassium-efflux system protein KefB 4522627 kefB 2885696 kefB Pectobacterium atrosepticum SCRI1043 glutathione-regulated potassium-efflux system protein KefB YP_052143.1 4520816 R 218491 CDS YP_052144.1 50122977 2883028 complement(4522629..4523180) 1 NC_004547.2 required for KefB activity; glutathione-regulated potassium-efflux system ancillary protein KefG 4523180 2883028 ECA4057 Pectobacterium atrosepticum SCRI1043 glutathione-regulated potassium-efflux system ancillary protein KefG YP_052144.1 4522629 R 218491 CDS YP_052145.1 50122978 2883029 4523306..4525213 1 NC_004547.2 Similar to Salmonella typhi probable ABC transporter ATP-binding protein yhes or sty4339 SWALL:Q8Z1Y8 (EMBL:AL627281) (635 aa) fasta scores: E(): 8.5e-168, 82.2% id in 635 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical ABC transporter ATP-binding protein yhes or b3352 or z4713 or ecs4203 SWALL:YHES_ECOLI (SWALL:P45535) (637 aa) fasta scores: E(): 1.9e-167, 82.91% id in 632 aa; ABC transporter ATP-binding protein 4525213 2883029 ECA4058 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_052145.1 4523306 D 218491 CDS YP_052146.1 50122979 2885636 complement(4525292..4525894) 1 NC_004547.2 Similar to Yersinia pestis ABC-transport protein ypo0181 SWALL:Q8ZJD2 (EMBL:AJ414141) (200 aa) fasta scores: E(): 4.2e-65, 80.5% id in 200 aa, and to Shewanella oneidensis transporter, lyse family so1716 SWALL:AAN54770 (EMBL:AE015617) (197 aa) fasta scores: E(): 9e-24, 36.73% id in 196 aa; hypothetical protein 4525894 2885636 ECA4059 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052146.1 4525292 R 218491 CDS YP_052147.1 50122980 2885637 4526001..4527020 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo0180 or y3961 SWALL:AAM87505 (EMBL:AJ414141) (326 aa) fasta scores: E(): 1.3e-103, 73.31% id in 326 aa, and to Escherichia coli O157:H7 orf, hypothetical protein yhet or z4714 or ecs4204 SWALL:Q8X873 (EMBL:AE005558) (340 aa) fasta scores: E(): 3.5e-95, 69.27% id in 319 aa; hydrolase 4527020 2885637 ECA4060 Pectobacterium atrosepticum SCRI1043 hydrolase YP_052147.1 4526001 D 218491 CDS YP_052148.1 50122981 2885638 4527022..4527258 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo0179 or y3960 SWALL:AAM87504 (EMBL:AJ414141) (78 aa) fasta scores: E(): 1.1e-19, 73.97% id in 73 aa, and to Salmonella typhi hypothetical protein yheu or sty4334 SWALL:Q8Z1Z0 (EMBL:AL627281) (72 aa) fasta scores: E(): 1.2e-19, 77.14% id in 70 aa; hypothetical protein 4527258 2885638 ECA4061 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052148.1 4527022 D 218491 CDS YP_052149.1 50122982 2882327 4527383..4528252 1 NC_004547.2 Similar to Alcaligenes eutrophus phosphoribulokinase, plasmid CfxP SWALL:KPPP_ALCEU (SWALL:P19924) (291 aa) fasta scores: E(): 6.8e-62, 56.69% id in 284 aa, and to Escherichia coli, and Shigella flexneri probable phosphoribulokinase PrkB or b3355 or sf3374 SWALL:KPPR_ECOLI (SWALL:P37307) (289 aa) fasta scores: E(): 8.9e-100, 86.15% id in 289 aa; phosphoribulokinase 4528252 prkB 2882327 prkB Pectobacterium atrosepticum SCRI1043 phosphoribulokinase YP_052149.1 4527383 D 218491 CDS YP_052150.1 50122983 2885639 complement(4528356..4528763) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo0176 or y3957 SWALL:AAM87501 (EMBL:AJ414141) (135 aa) fasta scores: E(): 1.9e-46, 89.39% id in 132 aa, and to Erwinia chrysanthemi orf2 protein SWALL:O07095 (EMBL:X89443) (135 aa) fasta scores: E(): 1.3e-45, 89.31% id in 131 aa; hypothetical protein 4528763 2885639 ECA4063 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052150.1 4528356 R 218491 CDS YP_052151.1 50122984 2884943 4529138..4529770 1 NC_004547.2 complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; cAMP-regulatory protein 4529770 crp 2884943 crp Pectobacterium atrosepticum SCRI1043 cAMP-regulatory protein YP_052151.1 4529138 D 218491 CDS YP_052152.1 50122985 2884140 complement(4529898..4531124) 1 NC_004547.2 DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 4531124 argD 2884140 argD Pectobacterium atrosepticum SCRI1043 bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein YP_052152.1 4529898 R 218491 CDS YP_052153.1 50122986 2885651 complement(4531245..4531820) 1 NC_004547.2 aminodeoxychorismate synthase subunit PabA; with PabB catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and glutamine in para-aminobenzoate synthesis; PabA provides the glutamine amidotransferase activity; para-aminobenzoate synthase component II 4531820 2885651 ECA4066 Pectobacterium atrosepticum SCRI1043 para-aminobenzoate synthase component II YP_052153.1 4531245 R 218491 CDS YP_052154.1 50122987 2885350 4532512..4533636 1 NC_004547.2 Similar to Erwinia carotovora pectate lyase I precursor Pel1 or PelA SWALL:PEL1_ERWCA (SWALL:P11430) (374 aa) fasta scores: E(): 1.3e-143, 97.05% id in 374 aa, and to Erwinia carotovora pectate lyase II precursor pel2 or pelB SWALL:PEL2_ERWCA (SWALL:P11431) (374 aa) fasta scores: E(): 8.6e-136, 90.1% id in 374 aa. Also similar to ECA4068 (88.503% id. in 374 aa overlap), and to ECA4069 (83.110% id. in 373 aa overlap); pectate lyase I 4533636 pelA 2885350 pelA Pectobacterium atrosepticum SCRI1043 pectate lyase I YP_052154.1 4532512 D 218491 CDS YP_052155.1 50122988 2885351 4534304..4535428 1 NC_004547.2 Similar to Erwinia carotovora pectate lyase II precursor Pel2 or PelB SWALL:PEL2_ERWCA (SWALL:P11431) (374 aa) fasta scores: E(): 3.8e-143, 94.11% id in 374 aa, and to Erwinia chrysanthemi pectate lyase B precursor PelB SWALL:PELB_ERWCH (SWALL:P04959) (375 aa) fasta scores: E(): 2.8e-112, 73.06% id in 375 aa. Also similar to ECA4067 (88.503% id. in 374 aa overlap), and to ECA4069 (82% id. in 373 aa overlap); pectate lyase II 4535428 pelB 2885351 pelB Pectobacterium atrosepticum SCRI1043 pectate lyase II YP_052155.1 4534304 D 218491 CDS YP_052156.1 50122989 2885604 4536014..4537138 1 NC_004547.2 Similar to Erwinia carotovora pectate lyase III precursor Pel3 or PelC or PelcI SWALL:PEL3_ERWCA (SWALL:P29171) (374 aa) fasta scores: E(): 1.1e-143, 95.72% id in 374 aa. Also similar to ECA4067 (83.110% id. in 374 aa overlap), and to ECA4068 (82.038% id. in 373 aa overlap); pectate lyase III 4537138 pelC 2885604 pelC Pectobacterium atrosepticum SCRI1043 pectate lyase III YP_052156.1 4536014 D 218491 CDS YP_052157.1 50122990 2884511 4537307..4538584 1 NC_004547.2 Similar to Erwinia chrysanthemi pectate lyase precursor PelZ SWALL:P94773 (EMBL:X97119) (420 aa) fasta scores: E(): 5.1e-120, 72.53% id in 426 aa; pectate lyase 4538584 pelZ 2884511 pelZ Pectobacterium atrosepticum SCRI1043 pectate lyase YP_052157.1 4537307 D 218491 CDS YP_052158.1 50122991 2882816 complement(4538833..4539402) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 peptidyl-prolyl cis-trans isomerase A precursor PpiA or RotA or Rot or b3363 or c4138 or z4724 or ecs4214 SWALL:PPIA_ECOLI (SWALL:P20752) (190 aa) fasta scores: E(): 2.1e-57, 79.47% id in 190 aa; peptidyl-prolyl cis-trans isomerase A 4539402 ppiA 2882816 ppiA Pectobacterium atrosepticum SCRI1043 peptidyl-prolyl cis-trans isomerase A YP_052158.1 4538833 R 218491 CDS YP_052159.1 50122992 2885652 complement(4539705..4540514) 1 NC_004547.2 Similar to Rhizobium meliloti dipeptide transport ATP-binding ABC transporter protein dppf2 or r02409 or smc01529 SWALL:Q92N30 (EMBL:AL591790) (255 aa) fasta scores: E(): 4.6e-46, 53.93% id in 254 aa, and to Agrobacterium tumefaciens ABC transporter, nucleotide binding/ATPase protein atu3456 or agr_l_2744 SWALL:Q8UAB8 (EMBL:AE009276) (259 aa) fasta scores: E(): 4e-46, 53.06% id in 245 aa; ABC transporter ATP-binding protein 4540514 2885652 ECA4072 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_052159.1 4539705 R 218491 CDS YP_052160.1 50122993 2885653 complement(4540526..4541350) 1 NC_004547.2 Similar to Agrobacterium tumefaciens ABC transporter, nucleotide binding/ATPase protein atu3457 or agr_l_2743 SWALL:Q8UAB7 (EMBL:AE009276) (278 aa) fasta scores: E(): 6.5e-62, 65.07% id in 272 aa, and to Rhizobium meliloti dipeptide transport ATP-binding ABC transporter protein dppd2 or r02410 or smc01528 SWALL:Q92N29 (EMBL:AL591790) (277 aa) fasta scores: E(): 3e-58, 61.99% id in 271 aa; ABC transporter ATP-binding protein 4541350 2885653 ECA4073 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_052160.1 4540526 R 218491 CDS YP_052161.1 50122994 2885672 complement(4541385..4542308) 1 NC_004547.2 Similar to Agrobacterium tumefaciens ABC transporter, membrane spanning protein atu3458 or agr_l_2741 SWALL:Q8UAB6 (EMBL:AE009276) (295 aa) fasta scores: E(): 5.9e-75, 64.18% id in 282 aa, and to Rhizobium meliloti dipeptide transport system permease ABC transporter protein dppc2 or r02411 or smc01527 SWALL:Q92N28 (EMBL:AL591790) (310 aa) fasta scores: E(): 4.7e-66, 54.8% id in 312 aa; ABC transporter permease 4542308 2885672 ECA4074 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_052161.1 4541385 R 218491 CDS YP_052162.1 50122995 2885673 complement(4542305..4543345) 1 NC_004547.2 Similar to Agrobacterium tumefaciens ABC transporter, membrane spanning protein atu3459 or agr_l_2740 SWALL:Q8UAB5 (EMBL:AE009276) (360 aa) fasta scores: E(): 2.4e-83, 63.15% id in 342 aa, and to Rhizobium meliloti dipeptide transport system permease ABC transporter protein dppb2 or r02412 or smc01526 SWALL:Q92N27 (EMBL:AL591790) (347 aa) fasta scores: E(): 1.7e-70, 56.4% id in 328 aa; ABC transporter permease 4543345 2885673 ECA4075 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_052162.1 4542305 R 218491 CDS YP_052163.1 50122996 2885674 complement(4543476..4545089) 1 NC_004547.2 Similar to Agrobacterium tumefaciens ABC transporter, substrate binding protein atu3455 or agr_l_2748 SWALL:Q8UAB9 (EMBL:AE009275) (549 aa) fasta scores: E(): 1.1e-105, 50.65% id in 535 aa, and to Rhizobium meliloti dipeptide binding periplasmic protein dppa2 or r02413 or smc01525 SWALL:Q92N26 (EMBL:AL591790) (546 aa) fasta scores: E(): 2.5e-43, 38.6% id in 531 aa; ABC transporter substrate binding protein 4545089 2885674 ECA4076 Pectobacterium atrosepticum SCRI1043 ABC transporter substrate binding protein YP_052163.1 4543476 R 218491 CDS YP_052164.1 50122997 2885675 complement(4545169..4546323) 1 NC_004547.2 Similar to Agrobacterium tumefaciens isomerase/lactonizing enzyme atu3453 or agr_l_2751 SWALL:Q8UAC1 (EMBL:AE009275) (407 aa) fasta scores: E(): 1.1e-110, 65.17% id in 379 aa, and to Sulfolobus tokodaii dgoa protein st2366 SWALL:Q96Y01 (EMBL:AP000989) (396 aa) fasta scores: E(): 2.9e-21, 27.64% id in 369 aa; mandelate racemase/muconate lactonizing protein 4546323 2885675 ECA4077 Pectobacterium atrosepticum SCRI1043 mandelate racemase/muconate lactonizing protein YP_052164.1 4545169 R 218491 CDS YP_052165.1 50122998 2882615 4546707..4546904 1 NC_004547.2 hypothetical protein 4546904 2882615 ECA4078 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052165.1 4546707 D 218491 CDS YP_052166.1 50122999 2881752 4546959..4549529 1 NC_004547.2 Similar to Escherichia coli nitrite reductase [NAD(P)H] large subunit NirB or b3365 SWALL:NIRB_ECOLI (SWALL:P08201) (847 aa) fasta scores: E(): 0, 80.45% id in 844 aa; nitrite reductase [NAD(P)H] large subunit 4549529 nirB 2881752 nirB Pectobacterium atrosepticum SCRI1043 nitrite reductase [NAD(P)H] large subunit YP_052166.1 4546959 D 218491 CDS YP_052167.1 50123000 2881281 4549526..4549894 1 NC_004547.2 involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+; bounds to NirB, the cytoplasmic subunit, whose expression is induced at high nitrate concentrations; nitrite reductase small subunit 4549894 nirD 2881281 nirD Pectobacterium atrosepticum SCRI1043 nitrite reductase small subunit YP_052167.1 4549526 D 218491 CDS YP_052168.1 50123001 2882115 4549962..4551341 1 NC_004547.2 multifunction enzyme consisting of uroporphyrin-III C-methyltransferase, precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase; catalyzes the methylation of uroporphyrinogen III to form precorrin-2, then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin; siroheme synthase 4551341 cysG 2882115 cysG Pectobacterium atrosepticum SCRI1043 siroheme synthase YP_052168.1 4549962 D 218491 CDS YP_052169.1 50123002 2883613 4551834..4552562 1 NC_004547.2 Similar to Agrobacterium tumefaciens, and Agrobacterium tumefaciens octopine transport system permease protein OccQ SWALL:OCCQ_AGRTU (SWALL:P35119) (237 aa) fasta scores: E(): 3e-44, 51.94% id in 231 aa, and to Rhizobium meliloti octopine transport system permease protein OccQ SWALL:OCCQ_RHIME (SWALL:P72295) (237 aa) fasta scores: E(): 9.3e-43, 50.64% id in 233 aa; octopine transport system permease 4552562 occQ 2883613 occQ Pectobacterium atrosepticum SCRI1043 octopine transport system permease YP_052169.1 4551834 D 218491 CDS YP_052170.1 50123003 2883611 4552562..4553296 1 NC_004547.2 Similar to Agrobacterium tumefaciens octopine transport system permease protein OccM SWALL:OCM2_AGRTU (SWALL:P35115) (245 aa) fasta scores: E(): 1e-50, 60.44% id in 225 aa, and to Rhizobium meliloti octopine transport system permease protein OccM occM SWALL:OCCM_RHIME (SWALL:P72296) (245 aa) fasta scores: E(): 1.2e-50, 60.81% id in 222 aa; octopine transport system permease 4553296 occM 2883611 occM Pectobacterium atrosepticum SCRI1043 octopine transport system permease YP_052170.1 4552562 D 218491 CDS YP_052171.1 50123004 2883612 4553293..4554057 1 NC_004547.2 Similar to Agrobacterium tumefaciens, and Agrobacterium tumefaciens octopine permease ATP-binding protein P OccP SWALL:OCCP_AGRTU (SWALL:P35117) (262 aa) fasta scores: E(): 4.5e-56, 63.85% id in 249 aa; octopine permease ATP-binding protein P 4554057 occP 2883612 occP Pectobacterium atrosepticum SCRI1043 octopine permease ATP-binding protein P YP_052171.1 4553293 D 218491 CDS YP_052172.1 50123005 2883754 4554284..4555153 1 NC_004547.2 Similar to Agrobacterium tumefaciens, and Agrobacterium tumefaciens octopine-binding periplasmic protein precursor OccT or OccJ SWALL:OCCT_AGRTU (SWALL:P35121) (276 aa) fasta scores: E(): 1.3e-38, 46.01% id in 276 aa, and to Rhizobium meliloti octopine-binding periplasmic protein precursor OccT SWALL:OCCT_RHIME (SWALL:P72298) (294 aa) fasta scores: E(): 5.7e-33, 43.34% id in 293 aa; octopine-binding periplasmic protein 4555153 occJ 2883754 occJ Pectobacterium atrosepticum SCRI1043 octopine-binding periplasmic protein YP_052172.1 4554284 D 218491 CDS YP_052173.1 50123006 2885152 4555196..4556704 1 NC_004547.2 Similar to Escherichia coli aminobenzoyl-glutamate utilization protein B AbgB or b1337 SWALL:ABGB_ECOLI (SWALL:P76052) (481 aa) fasta scores: E(): 3.5e-63, 47.23% id in 470 aa; aminobenzoyl-glutamate utilization protein B 4556704 abgB 2885152 abgB Pectobacterium atrosepticum SCRI1043 aminobenzoyl-glutamate utilization protein B YP_052173.1 4555196 D 218491 CDS YP_052174.1 50123007 2884232 complement(4556779..4557783) 1 NC_004547.2 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 4557783 trpS 2884232 trpS Pectobacterium atrosepticum SCRI1043 tryptophanyl-tRNA synthetase YP_052174.1 4556779 R 218491 CDS YP_052175.1 50123008 2885365 complement(4557780..4558484) 1 NC_004547.2 catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; phosphoglycolate phosphatase 4558484 gph 2885365 gph Pectobacterium atrosepticum SCRI1043 phosphoglycolate phosphatase YP_052175.1 4557780 R 218491 CDS YP_052176.1 50123009 2885026 complement(4558477..4559154) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri ribulose-phosphate 3-epimerase Rpe or Dod or b3386 or c4156 or z4739 or ecs4228 or sf3404 SWALL:RPE_ECOLI (SWALL:P32661) (225 aa) fasta scores: E(): 5.1e-71, 83.92% id in 224 aa; ribulose-phosphate 3-epimerase 4559154 rpe 2885026 rpe Pectobacterium atrosepticum SCRI1043 ribulose-phosphate 3-epimerase YP_052176.1 4558477 R 218491 CDS YP_052177.1 50123010 2882628 complement(4559278..4560090) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 DNA adenine methylase Dam or b3387 or z4740 or ecs4229 SWALL:DMA_ECOLI (SWALL:P00475) (278 aa) fasta scores: E(): 2.7e-78, 70% id in 270 aa; DNA adenine methylase 4560090 dam 2882628 dam Pectobacterium atrosepticum SCRI1043 DNA adenine methylase YP_052177.1 4559278 R 218491 CDS YP_052178.1 50123011 2882629 complement(4560170..4561186) 1 NC_004547.2 Similar to Escherichia coli DamX protein DamX or b3388 SWALL:DAMX_ECOLI (SWALL:P11557) (427 aa) fasta scores: E(): 4.4e-14, 40.15% id in 381 aa; hypothetical protein 4561186 damX 2882629 damX Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052178.1 4560170 R 218491 CDS YP_052179.1 50123012 2884132 complement(4561336..4562421) 1 NC_004547.2 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 4562421 aroB 2884132 aroB Pectobacterium atrosepticum SCRI1043 3-dehydroquinate synthase YP_052179.1 4561336 R 218491 CDS YP_052180.1 50123013 2884126 complement(4562473..4562994) 1 NC_004547.2 type I enzyme similar to type II but differentially regulated; major shikimate kinase in fully repressed cells; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase I 4562994 aroK 2884126 aroK Pectobacterium atrosepticum SCRI1043 shikimate kinase I YP_052180.1 4562473 R 218491 CDS YP_052181.2 229220650 2882075 complement(4563346..4564497) 1 NC_004547.2 outer membrane porin probably involved in uptake of extracellular double-stranded DNA; similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa; outer membrane porin HofQ 4564497 hofQ 2882075 hofQ Pectobacterium atrosepticum SCRI1043 outer membrane porin HofQ YP_052181.2 4563346 R 218491 CDS YP_052182.1 50123015 2882616 complement(4564710..4565087) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo0149 SWALL:Q8ZJF9 (EMBL:AJ414141) (122 aa) fasta scores: E(): 0.013, 29.41% id in 85 aa; hypothetical protein 4565087 2882616 ECA4095 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052182.1 4564710 R 218491 CDS YP_052183.1 50123016 2882617 complement(4565084..4565671) 1 NC_004547.2 Similar to Yersinia pestis hypothetical y3928 SWALL:AAM87472 (EMBL:AE013997) (208 aa) fasta scores: E(): 5, 23.78% id in 185 aa; hypothetical protein 4565671 2882617 ECA4096 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052183.1 4565084 R 218491 CDS YP_052184.1 50123017 2884048 complement(4565664..4566233) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo0147 SWALL:Q8ZJG1 (EMBL:AJ414141) (201 aa) fasta scores: E(): 7e-07, 25.77% id in 194 aa, and to Salmonella typhi membrane protein yrfc or sty4305 SWALL:Q8Z209 (EMBL:AL627281) (179 aa) fasta scores: E(): 6.7e-05, 29.25% id in 147 aa; hypothetical protein 4566233 2884048 ECA4097 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052184.1 4565664 R 218491 CDS YP_052185.1 50123018 2884049 complement(4566236..4567087) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo0146 or y3925 SWALL:Q8ZJG2 (EMBL:AJ414141) (313 aa) fasta scores: E(): 7.5e-48, 45.54% id in 292 aa, and to Salmonella typhi hypothetical protein yrfd or t4014 SWALL:AAO71484 (EMBL:AE016847) (259 aa) fasta scores: E(): 8.5e-14, 29.74% id in 279 aa; hypothetical protein 4567087 2884049 ECA4098 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052185.1 4566236 R 218491 CDS YP_052186.1 50123019 2881749 4567199..4569754 1 NC_004547.2 bifunctional murein transglycosylase/murein transpeptidase; penicillin-binding protein 1A; involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation; penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits; peptidoglycan synthetase 4569754 mrcA 2881749 mrcA Pectobacterium atrosepticum SCRI1043 peptidoglycan synthetase YP_052186.1 4567199 D 218491 CDS YP_052187.1 50123020 2884618 complement(4569837..4570394) 1 NC_004547.2 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; ADP-ribose diphosphatase NudE 4570394 nudE 2884618 nudE Pectobacterium atrosepticum SCRI1043 ADP-ribose diphosphatase NudE YP_052187.1 4569837 R 218491 CDS YP_052188.1 50123021 2884050 complement(4570411..4570593) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein Ypo0143 SWALL:Q8ZJG5 (EMBL:AJ414141) (64 aa) fasta scores: E(): 0.17, 36.17% id in 47 aa; hypothetical protein 4570593 2884050 ECA4101 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052188.1 4570411 R 218491 CDS YP_052189.1 50123022 2882328 4570831..4572978 1 NC_004547.2 Similar to Salmonella typhimurium intracellular growth attenuator protein IgaA or stm3495 SWALL:IGAA_SALTY (SWALL:Q9ACP0) (710 aa) fasta scores: E(): 2.3e-132, 50.14% id in 716 aa, and to Proteus mirabilis flagellar operon control protein UmoB SWALL:UMOB_PROMI (SWALL:O86988) (702 aa) fasta scores: E(): 1.8e-100, 40.11% id in 698 aa; intracellular growth attenuator protein 4572978 igaA 2882328 igaA Pectobacterium atrosepticum SCRI1043 intracellular growth attenuator protein YP_052189.1 4570831 D 218491 CDS YP_052190.1 50123023 2884018 4573107..4573793 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo0141 or y3921 SWALL:AAM87465 (EMBL:AJ414141) (226 aa) fasta scores: E(): 4.7e-69, 76.57% id in 222 aa, and to Salmonella typhi hydrolase yrfg or sty4300 SWALL:Q8Z212 (EMBL:AL627281) (236 aa) fasta scores: E(): 7.2e-59, 65.31% id in 222 aa; hydrolase 4573793 2884018 ECA4103 Pectobacterium atrosepticum SCRI1043 hydrolase YP_052190.1 4573107 D 218491 CDS YP_052191.1 50123024 2884052 4573911..4574321 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 heat shock protein 15 HslR or b3400 or c4171 or z4754 or ecs4242 SWALL:HSLR_ECOLI (SWALL:P45802) (133 aa) fasta scores: E(): 2.3e-36, 77.59% id in 125 aa; heat shock protein 4574321 hslR 2884052 hslR Pectobacterium atrosepticum SCRI1043 heat shock protein YP_052191.1 4573911 D 218491 CDS YP_052192.1 50123025 2884051 4574406..4575275 1 NC_004547.2 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Hsp33-like chaperonin 4575275 hslO 2884051 hslO Pectobacterium atrosepticum SCRI1043 Hsp33-like chaperonin YP_052192.1 4574406 D 218491 CDS YP_052193.1 50123026 2881430 4575473..4577092 1 NC_004547.2 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; phosphoenolpyruvate carboxykinase 4577092 pckA 2881430 pckA Pectobacterium atrosepticum SCRI1043 phosphoenolpyruvate carboxykinase YP_052193.1 4575473 D 218491 CDS YP_052194.1 50123027 2884533 complement(4577365..4578723) 1 NC_004547.2 membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR; osmolarity sensor protein 4578723 envZ 2884533 envZ Pectobacterium atrosepticum SCRI1043 osmolarity sensor protein YP_052194.1 4577365 R 218491 CDS YP_052195.1 50123028 2883330 complement(4578723..4579442) 1 NC_004547.2 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; osmolarity response regulator 4579442 ompR 2883330 ompR Pectobacterium atrosepticum SCRI1043 osmolarity response regulator YP_052195.1 4578723 R 218491 CDS YP_052196.1 50123029 2884019 complement(4579774..4580184) 1 NC_004547.2 Similar to Rhizobium fredii Y4yB SWALL:Q9EUG6 (EMBL:AF229441) (142 aa) fasta scores: E(): 8.8e-12, 38.58% id in 127 aa, and to Ralstonia solanacearum hypothetical protein rsp0413 or rs00870 SWALL:Q8XSQ4 (EMBL:AL646078) (146 aa) fasta scores: E(): 3.2e-29, 55.97% id in 134 aa; hypothetical protein 4580184 2884019 ECA4109 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052196.1 4579774 R 218491 CDS YP_052197.1 50123030 2884020 complement(4580247..4581398) 1 NC_004547.2 Similar to Yersinia pestis periplasmic substrate-binding transport protein ypo1310 SWALL:Q8ZGI7 (EMBL:AJ414147) (381 aa) fasta scores: E(): 3.8e-43, 34.91% id in 358 aa, and to Agrobacterium tumefaciens ABC transporter, substrate binding protein atu3391 or agr_l_2862 SWALL:Q8UAI2 (EMBL:AE009269) (377 aa) fasta scores: E(): 3.1e-81, 52.18% id in 366 aa; periplasmic substrate-binding protein 4581398 2884020 ECA4110 Pectobacterium atrosepticum SCRI1043 periplasmic substrate-binding protein YP_052197.1 4580247 R 218491 CDS YP_052198.1 50123031 2884021 complement(4581391..4582641) 1 NC_004547.2 Similar to Rhizobium fredii Y4xM SWALL:Q8RQC1 (EMBL:AF229441) (404 aa) fasta scores: E(): 8.6e-66, 49.87% id in 389 aa, and to Rhizobium sp. hypothetical transport protein y4xM SWALL:Y4XM_RHISN (SWALL:P55705) (404 aa) fasta scores: E(): 1.9e-66, 49.74% id in 392 aa; transporter 4582641 2884021 ECA4111 Pectobacterium atrosepticum SCRI1043 transporter YP_052198.1 4581391 R 218491 CDS YP_052199.1 50123032 2883960 complement(4582715..4583872) 1 NC_004547.2 Similar to Arthrobacter sp. opine dehydrogenase Odh SWALL:ODH_ARTSP (SWALL:Q44297) (359 aa) fasta scores: E(): 0.53, 26.42% id in 352 aa, and to Rhizobium fredii Y4xO SWALL:Q8RQB9 (EMBL:AF229441) (406 aa) fasta scores: E(): 2.7e-78, 54.83% id in 372 aa, and to Haliotis discus hannai tauropine dehydrogenase TadH SWALL:Q8N0N9 (EMBL:AB085184) (405 aa) fasta scores: E(): 6.1e-16, 24.33% id in 374 aa, and to Pecten maximus octopine dehydrogenase Odh1 SWALL:Q9BHM6 (EMBL:AJ237916) (399 aa) fasta scores: E(): 1.3e-12, 24.39% id in 369 aa; octopine/opine/tauropine dehydrogenase 4583872 2883960 ECA4112 Pectobacterium atrosepticum SCRI1043 octopine/opine/tauropine dehydrogenase YP_052199.1 4582715 R 218491 CDS YP_052200.1 50123033 2883961 complement(4583883..4584899) 1 NC_004547.2 Similar to Streptomyces venezuelae cystathionine beta-synthase cbssV SWALL:Q9EYM7 (EMBL:AF319543) (463 aa) fasta scores: E(): 1.5e-28, 36.81% id in 326 aa, and to Rhizobium fredii Y4xP SWALL:Q8RQB8 (EMBL:AF229441) (336 aa) fasta scores: E(): 1.6e-81, 69.06% id in 333 aa; cystathionine beta-synthase 4584899 2883961 ECA4113 Pectobacterium atrosepticum SCRI1043 cystathionine beta-synthase YP_052200.1 4583883 R 218491 CDS YP_052201.1 50123034 2883962 complement(4584913..4586316) 1 NC_004547.2 Similar to Selenomonas ruminantium lysine/ornithine decarboxylase Ldc SWALL:DCLO_SELRU (SWALL:O50657) (393 aa) fasta scores: E(): 4.2e-06, 26.53% id in 245 aa, and to Rhizobium fredii Y4yA SWALL:Q9EUG5 (EMBL:AF229441) (450 aa) fasta scores: E(): 6.6e-73, 49.08% id in 438 aa; lysine/ornithine decarboxylase 4586316 2883962 ECA4114 Pectobacterium atrosepticum SCRI1043 lysine/ornithine decarboxylase YP_052201.1 4584913 R 218491 CDS YP_052202.1 50123035 2883880 complement(4586358..4588553) 1 NC_004547.2 Similar to Ralstonia solanacearum probable ferric siderophore receptor protein rsp0414 or rs00871 SWALL:Q8XSQ3 (EMBL:AL646078) (746 aa) fasta scores: E(): 2.3e-136, 51.09% id in 734 aa, and to Vibrio anguillarum ferric anguibactin receptor precursor fatA SWALL:FATA_VIBAN (SWALL:P11461) (726 aa) fasta scores: E(): 3.5e-79, 35.45% id in 722 aa; TonB-dependent siderophore receptor 4588553 2883880 ECA4115 Pectobacterium atrosepticum SCRI1043 TonB-dependent siderophore receptor YP_052202.1 4586358 R 218491 CDS YP_052203.1 50123036 2883881 complement(4588636..4590537) 1 NC_004547.2 Similar to Escherichia coli aerobactin siderophore biosynthesis protein IucC SWALL:IUCC_ECOLI (SWALL:Q47318) (580 aa) fasta scores: E(): 9.5e-19, 29.59% id in 321 aa, and to Legionella pneumophila FrgA SWALL:P94901 (EMBL:U76559) (575 aa) fasta scores: E(): 2.6e-18, 23.43% id in 542 aa; siderophore biosynthesis protein 4590537 2883881 ECA4116 Pectobacterium atrosepticum SCRI1043 siderophore biosynthesis protein YP_052203.1 4588636 R 218491 CDS YP_052204.1 50123037 2883882 4590788..4591669 1 NC_004547.2 Similar to Klebsiella pneumoniae citrate lyase beta chain CitE SWALL:CILB_KLEPN (SWALL:P17725) (289 aa) fasta scores: E(): 4.4e-11, 30.13% id in 302 aa, and to Brucella melitensis citrate lyase beta chain bmeii1074 SWALL:Q8YB27 (EMBL:AE009739) (274 aa) fasta scores: E(): 1.3e-22, 40.71% id in 280 aa; citrate lyase subunit beta 4591669 2883882 ECA4117 Pectobacterium atrosepticum SCRI1043 citrate lyase subunit beta YP_052204.1 4590788 D 218491 CDS YP_052205.1 50123038 2885717 complement(4591738..4592217) 1 NC_004547.2 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreB 4592217 greB 2885717 greB Pectobacterium atrosepticum SCRI1043 transcription elongation factor GreB YP_052205.1 4591738 R 218491 CDS YP_052206.1 50123039 2883883 4592392..4594107 1 NC_004547.2 Similar to Shewanella oneidensis acyltransferase family protein so1238 SWALL:AAN54306 (EMBL:AE015568) (619 aa) fasta scores: E(): 3.1e-116, 48.86% id in 571 aa, and to Vibrio cholerae conserved hypothetical protein/hemolysin, vca0646 SWALL:Q9KLU5 (EMBL:AE004394) (605 aa) fasta scores: E(): 3.4e-53, 32.84% id in 551 aa; acyltransferase 4594107 2883883 ECA4119 Pectobacterium atrosepticum SCRI1043 acyltransferase YP_052206.1 4592392 D 218491 CDS YP_052207.1 50123040 2883834 4594503..4596164 1 NC_004547.2 Similar to Escherichia coli methyl-accepting chemotaxis protein II Tar or CheM or b1886 SWALL:MCP2_ECOLI (SWALL:P07017) (553 aa) fasta scores: E(): 5.6e-48, 37.8% id in 574 aa, and to Rahnella aquatilis methyl-accepting chemotaxis protein i SWALL:Q93ET6 (EMBL:AF338038) (554 aa) fasta scores: E(): 5.9e-58, 39.64% id in 560 aa; methyl-accepting chemotaxis protein 4596164 2883834 ECA4120 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_052207.1 4594503 D 218491 CDS YP_052208.1 50123041 2883835 complement(4596258..4597541) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 citrate synthase GltA or GluT or IcdB or b0720 or c0796 SWALL:CISY_ECOLI (SWALL:P00891) (427 aa) fasta scores: E(): 2e-119, 63.91% id in 424 aa; citrate synthase 4597541 2883835 ECA4121 Pectobacterium atrosepticum SCRI1043 citrate synthase YP_052208.1 4596258 R 218491 CDS YP_052209.1 50123042 2884306 4597892..4600225 1 NC_004547.2 Similar to Bordetella pertussis Tex protein WALL:TEX_BORPE (SWALL:Q45388) (791 aa) fasta scores: E(): 1.7e-165, 60.15% id in 783 aa, and to Salmonella typhi transcription accessory protein sty4292 SWALL:Q8Z218 (EMBL:AL627281) (776 aa) fasta scores: E(): 0, 83.67% id in 778 aa; RNA binding protein 4600225 tex 2884306 tex Pectobacterium atrosepticum SCRI1043 RNA binding protein YP_052209.1 4597892 D 218491 CDS YP_052210.1 50123043 2885253 4600454..4601242 1 NC_004547.2 Similar to Pectobacterium carotovorum subsp. carotovorum RexZ SWALL:Q9RB26 (EMBL:AF135394) (262 aa) fasta scores: E(): 9.6e-102, 96.56% id in 262 aa; regulator of exoenzyme 4601242 rexZ 2885253 rexZ Pectobacterium atrosepticum SCRI1043 regulator of exoenzyme YP_052210.1 4600454 D 218491 CDS YP_052211.1 50123044 2884867 4601730..4602686 1 NC_004547.2 transports degraded pectin products into the bacterial cell; 2-keto-3-deoxygluconate permease 4602686 kdgT 2884867 kdgT Pectobacterium atrosepticum SCRI1043 2-keto-3-deoxygluconate permease YP_052211.1 4601730 D 218491 CDS YP_052212.1 50123045 2885695 4602698..4603534 1 NC_004547.2 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; 5-keto-4-deoxyuronate isomerase 4603534 kduI2 2885695 kduI2 Pectobacterium atrosepticum SCRI1043 5-keto-4-deoxyuronate isomerase YP_052212.1 4602698 D 218491 CDS YP_052213.1 50123046 2884173 4603858..4604907 1 NC_004547.2 Similar to Escherichia coli L-asparaginase II precursor AnsB or b2957 SWALL:ASG2_ECOLI (SWALL:P00805) (348 aa) fasta scores: E(): 3.5e-42, 43.5% id in 354 aa, and to Erwinia chrysanthemi L-asparaginase precursor AnsB or Asn SWALL:ASPG_ERWCH (SWALL:P06608) (348 aa) fasta scores: E(): 9.6e-55, 54.26% id in 328 aa; L-asparaginase II 4604907 ansB2 2884173 ansB2 Pectobacterium atrosepticum SCRI1043 L-asparaginase II YP_052213.1 4603858 D 218491 CDS YP_052214.1 50123047 2883836 complement(4605050..4606333) 1 NC_004547.2 Similar to Pseudomonas putida ABC efflux transporter, permease protein, pp0506 SWALL:AAN66134 (EMBL:AE016775) (421 aa) fasta scores: E(): 3.1e-13, 30.02% id in 423 aa, and to Vibrio cholerae hypothetical protein Vc2554 SWALL:Q9KP25 (EMBL:AE004324) (421 aa) fasta scores: E(): 2.7e-10, 27.86% id in 427 aa; permease 4606333 2883836 ECA4127 Pectobacterium atrosepticum SCRI1043 permease YP_052214.1 4605050 R 218491 CDS YP_052215.1 50123048 2883694 complement(4606330..4607022) 1 NC_004547.2 Similar to Pseudomonas putida ABC transporter, ATP-binding protein, pp2317 SWALL:AAN67930 (EMBL:AE016782) (228 aa) fasta scores: E(): 5.5e-24, 42.85% id in 224 aa, and to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri hypothetical ABC transporter ATP-binding protein ybba or b0495 or z0648 or ecs0557 or sf0439 SWALL:AAN42094 (EMBL:AE000155) (228 aa) fasta scores: E(): 3.7e-24, 44.09% id in 220 aa; ABC transporter ATP-binding protein 4607022 2883694 ECA4128 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_052215.1 4606330 R 218491 CDS YP_052216.1 50123049 2883695 complement(4607031..4607510) 1 NC_004547.2 Similar to Deinococcus radiodurans hypothetical protein Drb0048 SWALL:Q9RZR7 (EMBL:AE001826) (152 aa) fasta scores: E(): 9.8e-20, 48.36% id in 122 aa; hypothetical protein 4607510 2883695 ECA4129 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052216.1 4607031 R 218491 CDS YP_052217.1 50123050 2883696 complement(4607523..4609268) 1 NC_004547.2 Similar to Schizophyllum commune alkaline phosphatase Pho1 SWALL:Q9UR10 (EMBL:AF209194) (604 aa) fasta scores: E(): 5.3e-20, 32.91% id in 477 aa, and to Schizosaccharomyces pombe alkaline phosphatase spbc14f5.13C SWALL:PPB_SCHPO (SWALL:O60109) (532 aa) fasta scores: E(): 8.8e-15, 26.68% id in 491 aa; alkaline phosphatase 4609268 2883696 ECA4130 Pectobacterium atrosepticum SCRI1043 alkaline phosphatase YP_052217.1 4607523 R 218491 CDS YP_052218.1 50123051 2884693 complement(4609363..4612485) 1 NC_004547.2 Similar to Escherichia coli probable aminoglycoside efflux pump AcrD or b2470 SWALL:ACRD_ECOLI (SWALL:P24177) (1037 aa) fasta scores: E(): 0, 79.51% id in 1035 aa, and to Escherichia coli acriflavine resistance protein B AcrB or AcrE or b0462 SWALL:ACRB_ECOLI (SWALL:P31224) (1049 aa) fasta scores: E(): 0, 64.87% id in 1042 aa; aminoglycoside/multidrug efflux system 4612485 acrD 2884693 acrD Pectobacterium atrosepticum SCRI1043 aminoglycoside/multidrug efflux system YP_052218.1 4609363 R 218491 CDS YP_052219.1 50123052 2882500 complement(4612669..4613436) 1 NC_004547.2 Similar to Escherichia coli BioH protein BioH or BioB or b3412 SWALL:BIOH_ECOLI (SWALL:P13001) (256 aa) fasta scores: E(): 1.2e-69, 69.29% id in 254 aa, and to Serratia marcescens hydrolase BioH SWALL:BAC53660 (EMBL:AB089611) (255 aa) fasta scores: E(): 1.9e-71, 74.11% id in 255 aa; biotin biosynthesis protein 4613436 bioH 2882500 bioH Pectobacterium atrosepticum SCRI1043 biotin biosynthesis protein YP_052219.1 4612669 R 218491 CDS YP_052220.1 50123053 2883674 4613483..4614184 1 NC_004547.2 involved in high-affinity gluconate transport; gluconate periplasmic-binding protein 4614184 2883674 ECA4133 Pectobacterium atrosepticum SCRI1043 gluconate periplasmic-binding protein YP_052220.1 4613483 D 218491 CDS YP_052221.1 50123054 2883675 4614245..4614820 1 NC_004547.2 cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; DNA uptake protein 4614820 2883675 ECA4134 Pectobacterium atrosepticum SCRI1043 DNA uptake protein YP_052221.1 4614245 D 218491 CDS YP_052222.1 50123055 2881335 complement(4614891..4616966) 1 NC_004547.2 amylomaltase; acts to release glucose from maltodextrins; 4-alpha-glucanotransferase 4616966 malQ 2881335 malQ Pectobacterium atrosepticum SCRI1043 4-alpha-glucanotransferase YP_052222.1 4614891 R 218491 CDS YP_052223.1 50123056 2881943 complement(4616988..4619510) 1 NC_004547.2 Similar to Escherichia coli maltodextrin phosphorylase MalP or b3417 SWALL:PHSM_ECOLI (SWALL:P00490) (796 aa) fasta scores: E(): 2.1e-214, 66.91% id in 801 aa; maltodextrin phosphorylase 4619510 malP 2881943 malP Pectobacterium atrosepticum SCRI1043 maltodextrin phosphorylase YP_052223.1 4616988 R 218491 CDS YP_052224.1 50123057 2881895 complement(4619553..4620311) 1 NC_004547.2 represses the glpD, glpFK, glpTQ, and glpACB operons involved in glycerol-3-phosphate metabolism; DNA-binding transcriptional repressor GlpR 4620311 glpR 2881895 glpR Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional repressor GlpR YP_052224.1 4619553 R 218491 CDS YP_052225.1 50123058 2881388 complement(4620336..4621169) 1 NC_004547.2 protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity; intramembrane serine protease GlpG 4621169 glpG 2881388 glpG Pectobacterium atrosepticum SCRI1043 intramembrane serine protease GlpG YP_052225.1 4620336 R 218491 CDS YP_052226.1 50123059 2881264 complement(4621244..4621561) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri thiosulfate sulfurtransferase GlpE or b3425 or c4202 or sf3447 SWALL:GLPE_ECOLI (SWALL:P09390) (108 aa) fasta scores: E(): 8e-23, 61.16% id in 103 aa; thiosulfate sulfurtransferase 4621561 glpE 2881264 glpE Pectobacterium atrosepticum SCRI1043 thiosulfate sulfurtransferase YP_052226.1 4621244 R 218491 CDS YP_052227.1 50123060 2883676 4621743..4622156 1 NC_004547.2 Similar to Xenorhabdus nematophilus glyoxalase GloA SWALL:Q8RLU7 (EMBL:AY077466) (132 aa) fasta scores: E(): 3.7e-36, 74.26% id in 136 aa, and to Clostridium acetobutylicum predicted aldoketomutase of glyoxalase i family cac2466 SWALL:Q97GA3 (EMBL:AE007746) (132 aa) fasta scores: E(): 5.2e-18, 46.66% id in 135 aa; glyoxalase 4622156 2883676 ECA4140 Pectobacterium atrosepticum SCRI1043 glyoxalase YP_052227.1 4621743 D 218491 CDS YP_052228.1 50123061 2881263 4622349..4623851 1 NC_004547.2 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; glycerol-3-phosphate dehydrogenase 4623851 glpD 2881263 glpD Pectobacterium atrosepticum SCRI1043 glycerol-3-phosphate dehydrogenase YP_052228.1 4622349 D 218491 CDS YP_052229.1 50123062 2883677 4624416..4626443 1 NC_004547.2 Similar to Photorhabdus luminescens VgrG SWALL:AAN64196 (EMBL:AY144117) (631 aa) fasta scores: E(): 1.5e-106, 47.15% id in 615 aa, and to Vibrio cholerae VgrG protein vc1416 SWALL:Q9KS45 (EMBL:AE004220) (1163 aa) fasta scores: E(): 4.8e-124, 51.84% id in 652 aa; RHS accessory genetic element 4626443 2883677 ECA4142 Pectobacterium atrosepticum SCRI1043 RHS accessory genetic element YP_052229.1 4624416 D 218491 CDS YP_052230.1 50123063 2883648 4626445..4627170 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein Pa3293 SWALL:Q9HYV0 (EMBL:AE004751) (271 aa) fasta scores: E(): 1.8, 25.9% id in 220 aa; hypothetical protein 4627170 2883648 ECA4143 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052230.1 4626445 D 218491 CDS YP_052231.1 50123064 2883649 4627167..4627685 1 NC_004547.2 Similar to Pseudomonas resinovorans hypothetical protein SWALL:BAC41541 (EMBL:AB088420) (170 aa) fasta scores: E(): 3.6, 25.17% id in 143 aa, and to Pseudomonas sp. CA10 hypothetical 18.9 kDa protein SWALL:Q9AQM6 (EMBL:AB047548) (170 aa) fasta scores: E(): 3.6, 25.17% id in 143 aa; hypothetical protein 4627685 2883649 ECA4144 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052231.1 4627167 D 218491 CDS YP_052232.1 50123065 2883650 4627807..4628325 1 NC_004547.2 Similar to Pseudomonas sp. CA10 hypothetical 18.9 kDa protein SWALL:Q9AQM6 (EMBL:AB047548) (170 aa) fasta scores: E(): 5.5, 26.02% id in 146 aa; hypothetical protein 4628325 2883650 ECA4145 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052232.1 4627807 D 218491 CDS YP_052233.1 50123066 2883578 4628325..4630040 1 NC_004547.2 Similar to Ralstonia solanacearum hypothetical protein rsp0177 or rs04689 SWALL:Q8XTD6 (EMBL:AL646077) (740 aa) fasta scores: E(): 0.0057, 25.85% id in 410 aa; hypothetical protein 4630040 2883578 ECA4146 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052233.1 4628325 D 218491 CDS YP_052234.1 50123067 2881719 complement(4630295..4632742) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri glycogen phosphorylase GlgP or GlgY or b3428 or sf3451 SWALL:PHSG_ECOLI (SWALL:P13031) (815 aa) fasta scores: E(): 0, 77.91% id in 815 aa; glycogen phosphorylase 4632742 glgP 2881719 glgP Pectobacterium atrosepticum SCRI1043 glycogen phosphorylase YP_052234.1 4630295 R 218491 CDS YP_052235.1 50123068 2882435 complement(4632818..4634257) 1 NC_004547.2 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; glycogen synthase 4634257 glgA 2882435 glgA Pectobacterium atrosepticum SCRI1043 glycogen synthase YP_052235.1 4632818 R 218491 CDS YP_052236.1 50123069 2881718 complement(4634286..4635563) 1 NC_004547.2 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; glucose-1-phosphate adenylyltransferase 4635563 glgC 2881718 glgC Pectobacterium atrosepticum SCRI1043 glucose-1-phosphate adenylyltransferase YP_052236.1 4634286 R 218491 CDS YP_052237.1 50123070 2881720 complement(4635600..4637576) 1 NC_004547.2 catalyzes the hydrolysis of the alpha-1,6-glucosidic linkages in partially depolymerized glycogen; glycogen debranching protein 4637576 glgX 2881720 glgX Pectobacterium atrosepticum SCRI1043 glycogen debranching protein YP_052237.1 4635600 R 218491 CDS YP_052238.1 50123071 2882436 complement(4637577..4639754) 1 NC_004547.2 catalyzes the transfer of a segment of a 1,4-alpha-D-glucan chain to a primary hydroxy group in a similar glucan chain; glycogen branching protein 4639754 glgB 2882436 glgB Pectobacterium atrosepticum SCRI1043 glycogen branching protein YP_052238.1 4637577 R 218491 CDS YP_052239.1 50123072 2883579 4640126..4641844 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo3943 or y3885 SWALL:Q8ZA74 (EMBL:AJ414159) (565 aa) fasta scores: E(): 5.9e-173, 82.11% id in 559 aa, and to Shigella flexneri 2a str. 2457T 2-component sensor protein yehu or s2325 SWALL:AAP17542 (EMBL:AE016985) (561 aa) fasta scores: E(): 8e-149, 68.84% id in 552 aa; two-component system sensor kinase 4641844 2883579 ECA4152 Pectobacterium atrosepticum SCRI1043 two-component system sensor kinase YP_052239.1 4640126 D 218491 CDS YP_052240.1 50123073 2883580 complement(4641917..4643185) 1 NC_004547.2 Similar to Erwinia amylovora hypothetical 47.8 kDa protein SWALL:Q9F814 (EMBL:AF264948) (427 aa) fasta scores: E(): 1.7e-30, 36.53% id in 364 aa, and to Caulobacter crescentus hypothetical protein Cc2770 SWALL:Q9A4R0 (EMBL:AE005942) (435 aa) fasta scores: E(): 2.8e-12, 31.42% id in 366 aa; hypothetical protein 4643185 2883580 ECA4153 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052240.1 4641917 R 218491 CDS YP_052241.1 50123074 2883581 complement(4643175..4643495) 1 NC_004547.2 Similar to Salmonella typhimurium transcriptional regulator stm2195 SWALL:Q8ZNL4 (EMBL:AE008798) (129 aa) fasta scores: E(): 0.00035, 26.92% id in 104 aa, and to Vibrio vulnificus conserved hypothetical protein vv12191 SWALL:AAO10575 (EMBL:AE016804) (107 aa) fasta scores: E(): 0.023, 32.96% id in 91 aa; transcriptional regulator 4643495 2883581 ECA4154 Pectobacterium atrosepticum SCRI1043 transcriptional regulator YP_052241.1 4643175 R 218491 CDS YP_052242.1 50123075 2884108 complement(4643741..4644844) 1 NC_004547.2 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 4644844 asd 2884108 asd Pectobacterium atrosepticum SCRI1043 aspartate-semialdehyde dehydrogenase YP_052242.1 4643741 R 218491 CDS YP_052243.1 50123076 2883360 4644942..4645145 1 NC_004547.2 hypothetical protein 4645145 2883360 ECA4156 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052243.1 4644942 D 218491 CDS YP_052244.1 50123077 2883361 4645142..4645735 1 NC_004547.2 YhgN; Ec0197; hydrolyzes nucleoside triphosphates with an O6 atom-containing purine base to nucleoside monophosphate and pyrophosphate; seems to play a role in the elimination of aberrant purine-derived nucleotides containing the 6-keto group; shows preference for deoxyinosine triphosphate and xanthosine triphosphate over standard nucleoside triphosphates (dATP, dCTP, dGTP, and dTTP); dITP- and XTP- hydrolase 4645735 2883361 ECA4157 Pectobacterium atrosepticum SCRI1043 dITP- and XTP- hydrolase YP_052244.1 4645142 D 218491 CDS YP_052245.1 50123078 2881584 complement(4646079..4647455) 1 NC_004547.2 Similar to Corynebacterium glutamicum gluconate permease GntP or cgl2908 SWALL:Q9AL75 (EMBL:AJ296014) (463 aa) fasta scores: E(): 4.9e-91, 57.01% id in 442 aa, and to Pasteurella multocida GntP GntP_1 or pm0793 SWALL:Q9CMM5 (EMBL:AE006118) (449 aa) fasta scores: E(): 7.8e-114, 69.7% id in 449 aa; gluconate permease 4647455 gntP 2881584 gntP Pectobacterium atrosepticum SCRI1043 gluconate permease YP_052245.1 4646079 R 218491 CDS YP_052246.1 50123079 2883362 <4647613..4647825 1 NC_004547.2 Partial CDS. Similar to the N-terminal regions of Escherichia coli thermosensitive gluconokinase IdnK or GntV or b4268 SWALL:IDNK_ECOLI (SWALL:P39208) (187 aa) fasta scores: E(): 2.8e-13, 61.42% id in 70 aa, and to Yersinia pestis thermosensitive gluconokinase idnk or ypo2540 or gntv or y1646 SWALL:AAM85215 (EMBL:AJ414152) (178 aa) fasta scores: E(): 3.1e-17, 78.57% id in 70 aa; gluconokinase 4647825 2883362 ECA4159 Pectobacterium atrosepticum SCRI1043 gluconokinase YP_052246.1 <4647613 D 218491 CDS YP_052247.1 50123080 2881635 complement(4647816..>4648331) 1 NC_004547.2 Partial CDS. Similar to the C-terminal regions of Escherichia coli, and Escherichia coli O6 gluconate utilization system Gnt-I transcriptional repressor GntR or b3438 or c4227 SWALL:GNTR_ECOLI (SWALL:P46860) (331 aa) fasta scores: E(): 4.1e-47, 78.36% id in 171 aa, and to Yersinia pestis gluconate utilization system Gnt-I transcriptional repressor gntr or ypo3955 or y3873 SWALL:Q8ZA63 (EMBL:AJ414160) (331 aa) fasta scores: E(): 1.8e-47, 78.94% id in 171 aa; gluconate utilization system Gnt-I transcriptional repressor (partial) >4648331 gntR 2881635 gntR Pectobacterium atrosepticum SCRI1043 gluconate utilization system Gnt-I transcriptional repressor (partial) YP_052247.1 4647816 R 218491 CDS YP_052248.1 50123081 2883265 4648692..4650488 1 NC_004547.2 Similar to Alteromonas sp. beta-hexosaminidase A precursor Cht60 SWALL:HEXA_ALTSO (SWALL:P48823) (598 aa) fasta scores: E(): 1.2e-60, 37.11% id in 590 aa, and to Ralstonia solanacearum hydrolase glycosidase protein rsc0769 or rs05085 SWALL:Q8Y1C1 (EMBL:AL646060) (734 aa) fasta scores: E(): 3.2e-82, 45.02% id in 653 aa; beta-hexosaminidase 4650488 2883265 ECA4161 Pectobacterium atrosepticum SCRI1043 beta-hexosaminidase YP_052248.1 4648692 D 218491 CDS YP_052249.1 50123082 2883266 complement(4650551..4651246) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3956 or y3872 SWALL:Q8ZA62 (EMBL:AJ414160) (231 aa) fasta scores: E(): 2.2e-82, 82.25% id in 231 aa, and to Salmonella typhimurium, and Salmonella typhi cytoplasmic protein yhhw or stm3544 or sty4267 SWALL:Q8XFI4 (EMBL:AE008863) (231 aa) fasta scores: E(): 4.1e-81, 80.95% id in 231 aa; hypothetical protein 4651246 2883266 ECA4162 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052249.1 4650551 R 218491 CDS YP_052250.1 50123083 2881262 complement(4651655..4652866) 1 NC_004547.2 anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate; sn-glycerol-3-phosphate dehydrogenase subunit C 4652866 glpC 2881262 glpC Pectobacterium atrosepticum SCRI1043 sn-glycerol-3-phosphate dehydrogenase subunit C YP_052250.1 4651655 R 218491 CDS YP_052251.1 50123084 2881324 complement(4652863..4654125) 1 NC_004547.2 sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters; anaerobic glycerol-3-phosphate dehydrogenase subunit B 4654125 glpB 2881324 glpB Pectobacterium atrosepticum SCRI1043 anaerobic glycerol-3-phosphate dehydrogenase subunit B YP_052251.1 4652863 R 218491 CDS YP_052252.1 50123085 2881323 complement(4654115..4655785) 1 NC_004547.2 anaerobic, catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor; sn-glycerol-3-phosphate dehydrogenase subunit A 4655785 glpA 2881323 glpA Pectobacterium atrosepticum SCRI1043 sn-glycerol-3-phosphate dehydrogenase subunit A YP_052252.1 4654115 R 218491 CDS YP_052253.1 50123086 2881896 4656105..4657454 1 NC_004547.2 catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell; sn-glycerol-3-phosphate transporter 4657454 glpT 2881896 glpT Pectobacterium atrosepticum SCRI1043 sn-glycerol-3-phosphate transporter YP_052253.1 4656105 D 218491 CDS YP_052254.1 50123087 2881894 4657530..4658615 1 NC_004547.2 hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols; periplasmic; glycerophosphodiester phosphodiesterase 4658615 glpQ 2881894 glpQ Pectobacterium atrosepticum SCRI1043 glycerophosphodiester phosphodiesterase YP_052254.1 4657530 D 218491 CDS YP_052255.1 50123088 2883267 complement(4658794..4659594) 1 NC_004547.2 purine and pyrimidine nucleotides are secondary substrates; yigL expression is regulated by heat shock, osmotic shock and starvation of glucose, phosphate or ammonium; sugar phosphatase 4659594 2883267 ECA4168 Pectobacterium atrosepticum SCRI1043 sugar phosphatase YP_052255.1 4658794 R 218491 CDS YP_052256.1 50123089 2883489 complement(4659695..4660732) 1 NC_004547.2 lecithinase B; catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine; can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates; lysophospholipase L2 4660732 pldB 2883489 pldB Pectobacterium atrosepticum SCRI1043 lysophospholipase L2 YP_052256.1 4659695 R 218491 CDS YP_052257.1 50123090 2884799 4660865..4661485 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri homoserine/homoserine lactone efflux protein RhtB or b3824 or c4746 or z5345 or ecs4754 or sf3902 SWALL:RHTB_ECOLI (SWALL:P27847) (206 aa) fasta scores: E(): 1.1e-63, 77.18% id in 206 aa. Also similar to ECA0827 (RhtB) (36.019% id. in 211 aa overlap); homoserine/homoserine lactone efflux protein 4661485 rhtB 2884799 rhtB Pectobacterium atrosepticum SCRI1043 homoserine/homoserine lactone efflux protein YP_052257.1 4660865 D 218491 CDS YP_052258.1 50123091 2884800 complement(4661556..4662179) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 threonine efflux protein RhtC or b3823 or z5344 or ecs4753 SWALL:RHTC_ECOLI (SWALL:P27846) (206 aa) fasta scores: E(): 3.3e-62, 73.43% id in 207 aa; threonine efflux system 4662179 rhtC 2884800 rhtC Pectobacterium atrosepticum SCRI1043 threonine efflux system YP_052258.1 4661556 R 218491 CDS YP_052259.1 50123092 2885108 complement(4662224..4664050) 1 NC_004547.2 functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway; ATP-dependent DNA helicase RecQ 4664050 recQ 2885108 recQ Pectobacterium atrosepticum SCRI1043 ATP-dependent DNA helicase RecQ YP_052259.1 4662224 R 218491 CDS YP_052260.1 50123093 2883488 complement(4664149..4665015) 1 NC_004547.2 catalyzes the hydrolysis of phosphatidylcholine; phospholipase A 4665015 pldA 2883488 pldA Pectobacterium atrosepticum SCRI1043 phospholipase A YP_052260.1 4664149 R 218491 CDS YP_052261.1 50123094 2883217 4665267..4665755 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3835 or y0395 SWALL:Q8ZAG7 (EMBL:AJ414159) (156 aa) fasta scores: E(): 1.4e-35, 63.39% id in 153 aa, and to Escherichia coli, Escherichia coli O6, and Shigella flexneri hypothetical protein yigi or b3820 or c4741 or sf3898 SWALL:YIGI_ECOLI (SWALL:P27845) (155 aa) fasta scores: E(): 1.6e-35, 64.9% id in 151 aa; hypothetical protein 4665755 2883217 ECA4174 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052261.1 4665267 D 218491 CDS YP_052262.1 50123095 2883218 4665855..4666784 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo3836 SWALL:Q8ZAG6 (EMBL:AJ414159) (296 aa) fasta scores: E(): 1.9e-90, 76.68% id in 296 aa, and to Escherichia coli protein RarD or b3819 SWALL:RARD_ECOLI (SWALL:P27844) (296 aa) fasta scores: E(): 5e-85, 70.94% id in 296 aa; hypothetical protein 4666784 2883218 ECA4175 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052262.1 4665855 D 218491 CDS YP_052263.1 50123096 2885153 complement(4666750..4667808) 1 NC_004547.2 Similar to Escherichia coli AbrB protein AbrB or b0715 SWALL:ABRB_ECOLI (SWALL:P75747) (348 aa) fasta scores: E(): 4.8e-66, 51.91% id in 339 aa, and to Salmonella typhi membrane protein sty0772 SWALL:Q8Z8D1 (EMBL:AL627268) (348 aa) fasta scores: E(): 2.1e-67, 53.39% id in 339 aa; hypothetical protein 4667808 abrB 2885153 abrB Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052263.1 4666750 R 218491 CDS YP_052264.1 50123097 2884950 complement(4668036..4668986) 1 NC_004547.2 responsible for the influx of magnesium ions; magnesium/nickel/cobalt transporter CorA 4668986 corA 2884950 corA Pectobacterium atrosepticum SCRI1043 magnesium/nickel/cobalt transporter CorA YP_052264.1 4668036 R 218491 CDS YP_052265.1 50123098 2883219 complement(4669394..4670140) 1 NC_004547.2 Similar to Staphylococcus epidermidis conserved hypothetical protein se2383 SWALL:AAO06026 (EMBL:AE016752) (247 aa) fasta scores: E(): 4.6e-48, 50.21% id in 237 aa, and to Pasteurella multocida hypothetical protein Pm0097 SWALL:Q9CPE7 (EMBL:AE006045) (247 aa) fasta scores: E(): 7.6e-57, 58.43% id in 243 aa; hypothetical protein 4670140 2883219 ECA4178 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052265.1 4669394 R 218491 CDS YP_052266.1 50123099 2882767 complement(4670269..4672431) 1 NC_004547.2 unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair.; DNA-dependent helicase II 4672431 uvrD 2882767 uvrD Pectobacterium atrosepticum SCRI1043 DNA-dependent helicase II YP_052266.1 4670269 R 218491 CDS YP_052267.1 50123100 2883220 complement(4672514..4673230) 1 NC_004547.2 YigB; member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein; unknown function; flavin mononucleotide phosphatase 4673230 2883220 ECA4180 Pectobacterium atrosepticum SCRI1043 flavin mononucleotide phosphatase YP_052267.1 4672514 R 218491 CDS YP_052268.1 50123101 2882647 complement(4673230..4674165) 1 NC_004547.2 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 4674165 xerC 2882647 xerC Pectobacterium atrosepticum SCRI1043 site-specific tyrosine recombinase XerC YP_052268.1 4673230 R 218491 CDS YP_052269.1 50123102 2883194 complement(4674162..4674866) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3844 or y0386 SWALL:Q8ZAF8 (EMBL:AJ414159) (234 aa) fasta scores: E(): 1.8e-68, 73.93% id in 234 aa, and to Salmonella typhi hypothetical protein Sty3611 SWALL:Q8Z3A7 (EMBL:AL627279) (235 aa) fasta scores: E(): 4.6e-60, 64.68% id in 235 aa; hypothetical protein 4674866 2883194 ECA4182 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052269.1 4674162 R 218491 CDS YP_052270.1 50123103 2885140 complement(4674863..4675687) 1 NC_004547.2 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 4675687 dapF 2885140 dapF Pectobacterium atrosepticum SCRI1043 diaminopimelate epimerase YP_052270.1 4674863 R 218491 CDS YP_052271.1 50123104 2883195 complement(4675765..4675950) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical lipoprotein yifl precursor yifl or b3808.1 or c4729 or z5325 or ecs4737.1 or sf3886 SWALL:AAN83162 (EMBL:M87049) (67 aa) fasta scores: E(): 0.00042, 45.09% id in 51 aa, and to Salmonella typhimurium, and Salmonella typhi hypothetical lipoprotein yifl precursor yifl or stm3946 or stmd1.100 or sty3613 or t3351 SWALL:YIFL_SALTY (SWALL:Q9L6P7) (67 aa) fasta scores: E(): 0.00042, 43.13% id in 51 aa; lipoprotein 4675950 2883195 ECA4184 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_052271.1 4675765 R 218491 CDS YP_052272.1 50123105 2883172 4676010..4676330 1 NC_004547.2 defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; frataxin-like protein 4676330 cyaY 2883172 cyaY Pectobacterium atrosepticum SCRI1043 frataxin-like protein YP_052272.1 4676010 D 218491 CDS YP_052273.1 50123106 2883196 complement(4676383..4677558) 1 NC_004547.2 Similar to Bradyrhizobium japonicum mfs permease blr1017 SWALL:BAC46282 (EMBL:AP005938) (417 aa) fasta scores: E(): 8.2e-38, 34.6% id in 393 aa, and to Pseudomonas aeruginosa similar to metabolite transport protein SWALL:AAN62124 (EMBL:AF440523) (408 aa) fasta scores: E(): 1e-35, 34.2% id in 383 aa; hypothetical protein 4677558 2883196 ECA4186 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052273.1 4676383 R 218491 CDS YP_052274.1 50123107 2883326 complement(4677604..4680162) 1 NC_004547.2 catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; adenylate cyclase 4680162 cyaA 2883326 cyaA Pectobacterium atrosepticum SCRI1043 adenylate cyclase YP_052274.1 4677604 R 218491 CDS YP_052275.1 50123108 2885596 4680620..4681561 1 NC_004547.2 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 4681561 hemC 2885596 hemC Pectobacterium atrosepticum SCRI1043 porphobilinogen deaminase YP_052275.1 4680620 D 218491 CDS YP_052276.1 50123109 2885668 4681558..4682298 1 NC_004547.2 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 4682298 hemD 2885668 hemD Pectobacterium atrosepticum SCRI1043 uroporphyrinogen-III synthase YP_052276.1 4681558 D 218491 CDS YP_052277.1 50123110 2882233 4682322..4683446 1 NC_004547.2 Similar to Escherichia coli uroporphyrin-III C-methyltransferase HemX or b3803 SWALL:HEMX_ECOLI (SWALL:P09127) (393 aa) fasta scores: E(): 5.1e-71, 60.54% id in 370 aa; uroporphyrinogen III C-methyltransferase 4683446 hemX 2882233 hemX Pectobacterium atrosepticum SCRI1043 uroporphyrinogen III C-methyltransferase YP_052277.1 4682322 D 218491 CDS YP_052278.1 50123111 2882234 4683449..4684642 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri HemY protein HemY or b3802 or c4721 or z5316 or ecs4732 or sf3874 SWALL:HEMY_ECOLI (SWALL:P09128) (398 aa) fasta scores: E(): 1.3e-109, 73.02% id in 393 aa, and to Salmonella typhi porphyrin biosynthetic protein sty3624 SWALL:Q8Z398 (EMBL:AL627279) (399 aa) fasta scores: E(): 7e-108, 71.24% id in 393 aa; protoheme IX biogenesis protein 4684642 hemY 2882234 hemY Pectobacterium atrosepticum SCRI1043 protoheme IX biogenesis protein YP_052278.1 4683449 D 218491 CDS YP_052279.1 50123112 2883126 complement(4685315..4686472) 1 NC_004547.2 Similar to Sulfolobus solfataricus thermostable carboxypeptidase 1 CpsA1 or CpsA-1 or CpsA or sso1355 SWALL:CBP1_SULSO (SWALL:P80092) (393 aa) fasta scores: E(): 6.5e-42, 36.93% id in 379 aa, and to Zymomonas mobilis amino acid amido hydrolase SWALL:Q9FDK6 (EMBL:AF212041) (380 aa) fasta scores: E(): 2.3e-67, 46.93% id in 375 aa; peptidase 4686472 2883126 ECA4192 Pectobacterium atrosepticum SCRI1043 peptidase YP_052279.1 4685315 R 218491 CDS YP_052280.1 50123113 2883127 complement(4686550..4687311) 1 NC_004547.2 Similar to Bacillus subtilis probable amino-acid ABC transporter ATP-binding protein YxeO or lp9G SWALL:YXEO_BACSU (SWALL:P54954) (249 aa) fasta scores: E(): 1.6e-51, 63.2% id in 250 aa, and to Clostridium acetobutylicum ABC-type polar amino acid transport system, ATPase component cac0879 SWALL:Q97KN8 (EMBL:AE007603) (243 aa) fasta scores: E(): 4.7e-45, 57.43% id in 242 aa; amino acid ABC transporter ATP-binding protein 4687311 2883127 ECA4193 Pectobacterium atrosepticum SCRI1043 amino acid ABC transporter ATP-binding protein YP_052280.1 4686550 R 218491 CDS YP_052281.1 50123114 2883128 complement(4687321..4687992) 1 NC_004547.2 Similar to Vibrio harveyi probable amino-acid ABC transporter permease protein PatM SWALL:PATM_VIBHA (SWALL:P52625) (223 aa) fasta scores: E(): 2.3e-36, 47.98% id in 223 aa, and to Bacillus subtilis probable amino-acid ABC transporter permease protein yxen or lp9F SWALL:YXEN_BACSU (SWALL:P54953) (224 aa) fasta scores: E(): 1.2e-45, 57.07% id in 219 aa; amino acid ABC transporter permease 4687992 2883128 ECA4194 Pectobacterium atrosepticum SCRI1043 amino acid ABC transporter permease YP_052281.1 4687321 R 218491 CDS YP_052282.1 50123115 2883129 complement(4688132..4688923) 1 NC_004547.2 Similar to Vibrio harveyi amino-acid ABC transporter binding protein PatH precursor PatH SWALL:PATH_VIBHA (SWALL:P52626) (248 aa) fasta scores: E(): 1.6e-27, 39.6% id in 255 aa, and to Bacillus subtilis probable amino-acid ABC transporter binding protein yxem precursor yxem or lp9E SWALL:YXEM_BACSU (SWALL:P54952) (264 aa) fasta scores: E(): 4.7e-48, 53.28% id in 259 aa; amino acid ABC transporter binding protein 4688923 2883129 ECA4195 Pectobacterium atrosepticum SCRI1043 amino acid ABC transporter binding protein YP_052282.1 4688132 R 218491 CDS YP_052283.1 50123116 2882872 complement(4688920..4689462) 1 NC_004547.2 Similar to Bacillus subtilis hypothetical protein yxel or lp9D SWALL:YXEL_BACSU (SWALL:P54951) (165 aa) fasta scores: E(): 1.2e-30, 49.69% id in 165 aa, and to Listeria innocua hypothetical protein Lin2444 lin2444 SWALL:Q928T8 (EMBL:AL596172) (178 aa) fasta scores: E(): 1.6e-20, 38.18% id in 165 aa; acetyltransferase 4689462 2882872 ECA4196 Pectobacterium atrosepticum SCRI1043 acetyltransferase YP_052283.1 4688920 R 218491 CDS YP_052284.1 50123117 2882873 complement(4689472..4690836) 1 NC_004547.2 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 4690836 2882873 ECA4197 Pectobacterium atrosepticum SCRI1043 adenylosuccinate lyase YP_052284.1 4689472 R 218491 CDS YP_052285.1 50123118 2882874 4691085..4692392 1 NC_004547.2 Similar to Pseudomonas syringae phytase PhyM SWALL:AAN77879 (EMBL:AY156083) (428 aa) fasta scores: E(): 3.4e-77, 48.73% id in 433 aa, and to Escherichia coli glucose-1-phosphatase precursor Agp or b1002 SWALL:AGP_ECOLI (SWALL:P19926) (413 aa) fasta scores: E(): 1.5e-31, 31.08% id in 415 aa; exported phosphatase 4692392 2882874 ECA4198 Pectobacterium atrosepticum SCRI1043 exported phosphatase YP_052285.1 4691085 D 218491 CDS YP_052286.1 50123119 2882780 complement(4693180..4694568) 1 NC_004547.2 uncharacterized member of the amino acid-polyamine-organocation (APC) superfamily of amino acid transporters; unknown function; transporter 4694568 2882780 ECA4199 Pectobacterium atrosepticum SCRI1043 transporter YP_052286.1 4693180 R 218491 CDS YP_052287.1 50123120 2882657 complement(4694897..4695646) 1 NC_004547.2 Similar to Escherichia coli probable UDP-N-acetyl-D-mannosaminuronic acid transferase WecG or RffM or b3794 SWALL:WECG_ECOLI (SWALL:P27836) (246 aa) fasta scores: E(): 9.8e-68, 72.76% id in 246 aa; UDP-N-acetyl-D-mannosaminuronic acid transferase 4695646 wecG 2882657 wecG Pectobacterium atrosepticum SCRI1043 UDP-N-acetyl-D-mannosaminuronic acid transferase YP_052287.1 4694897 R 218491 CDS YP_052288.1 50123121 2882650 complement(4695643..4697034) 1 NC_004547.2 enterobacterial common antigen polymerase; common antigen polymerase 4697034 wzyE 2882650 wzyE Pectobacterium atrosepticum SCRI1043 common antigen polymerase YP_052288.1 4695643 R 218491 CDS YP_052289.1 50123122 2882656 complement(4697031..4698116) 1 NC_004547.2 catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis; 4-alpha-L-fucosyltransferase 4698116 wecF 2882656 wecF Pectobacterium atrosepticum SCRI1043 4-alpha-L-fucosyltransferase YP_052289.1 4697031 R 218491 CDS YP_052290.1 50123123 2882655 complement(4698113..4699363) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri wzxe protein WzxE or Wzx or b3792 or sf3866 SWALL:WZXE_ECOLI (SWALL:P27834) (416 aa) fasta scores: E(): 6.6e-111, 72.11% id in 416 aa, and to Yersinia pestis lipopolysaccharide biosynthesis protein WzxE or ypo3858 or y0370 SWALL:Q8ZAE9 (EMBL:AJ414159) (418 aa) fasta scores: E(): 4e-119, 76.92% id in 416 aa; entero common antigen (ECA) biosynthesis protein 4699363 wzxE 2882655 wzxE Pectobacterium atrosepticum SCRI1043 entero common antigen (ECA) biosynthesis protein YP_052290.1 4698113 R 218491 CDS YP_052291.1 50123124 2885071 complement(4699365..4700495) 1 NC_004547.2 catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis; TDP-4-oxo-6-deoxy-D-glucose transaminase 4700495 rffA 2885071 rffA Pectobacterium atrosepticum SCRI1043 TDP-4-oxo-6-deoxy-D-glucose transaminase YP_052291.1 4699365 R 218491 CDS YP_052292.1 50123125 2885066 complement(4700500..4701231) 1 NC_004547.2 Similar to Escherichia coli lipopolysaccharide biosynthesis protein RffC or WecD or b3790 SWALL:RFFC_ECOLI (SWALL:P27832) (181 aa) fasta scores: E(): 1e-33, 55.78% id in 190 aa; TDP-fucosamine acetyltransferase 4701231 rffC 2885066 rffC Pectobacterium atrosepticum SCRI1043 TDP-fucosamine acetyltransferase YP_052292.1 4700500 R 218491 CDS YP_052293.1 50123126 2885067 complement(4701286..4702353) 1 NC_004547.2 Similar to Escherichia coli dTDP-glucose 4,6-dehydratase RffG or b3788 SWALL:RFFG_ECOLI (SWALL:P27830) (355 aa) fasta scores: E(): 6.4e-119, 83% id in 353 aa; dTDP-glucose 4,6-dehydratase 4702353 rffG 2885067 rffG Pectobacterium atrosepticum SCRI1043 dTDP-glucose 4,6-dehydratase YP_052293.1 4701286 R 218491 CDS YP_052294.1 50123127 2882660 complement(4702350..4703612) 1 NC_004547.2 catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid; UDP-N-acetyl-D-mannosamine dehydrogenase 4703612 wecC 2882660 wecC Pectobacterium atrosepticum SCRI1043 UDP-N-acetyl-D-mannosamine dehydrogenase YP_052294.1 4702350 R 218491 CDS YP_052295.1 50123128 2882659 complement(4703738..4704862) 1 NC_004547.2 Similar to Escherichia coli UDP-N-acetylglucosamine 2-epimerase WecB or RffE or NfrC or b3786 SWALL:WECB_ECOLI (SWALL:P27828) (376 aa) fasta scores: E(): 8.5e-116, 77.21% id in 373 aa; UDP-N-acetylglucosamine 2-epimerase 4704862 wecB 2882659 wecB Pectobacterium atrosepticum SCRI1043 UDP-N-acetylglucosamine 2-epimerase YP_052295.1 4703738 R 218491 CDS YP_052296.1 50123129 2882651 complement(4704930..4705976) 1 NC_004547.2 Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein; lipopolysaccharide biosynthesis protein WzzE 4705976 wzzE 2882651 wzzE Pectobacterium atrosepticum SCRI1043 lipopolysaccharide biosynthesis protein WzzE YP_052296.1 4704930 R 218491 CDS YP_052297.1 50123130 2882360 complement(4705998..4707095) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase WecA or Rfe or b3784 or c4704 or sf3858 SWALL:WECA_ECOLI (SWALL:P24235) (367 aa) fasta scores: E(): 7.4e-112, 75.97% id in 358 aa; undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase 4707095 wecA 2882360 wecA Pectobacterium atrosepticum SCRI1043 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase YP_052297.1 4705998 R 218491 CDS YP_052298.1 50123131 2884683 complement(4707399..4708658) 1 NC_004547.2 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 4708658 rho 2884683 rho Pectobacterium atrosepticum SCRI1043 transcription termination factor Rho YP_052298.1 4707399 R 218491 CDS YP_052299.1 50123132 2882781 complement(4709153..4709479) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, Salmonella typhimurium, Salmonella typhi, and Shigella flexneri thioredoxin 1 SWALL:THIO_ECOLI (SWALL:P00274) (108 aa) fasta scores: E(): 1e-36, 88.78% id in 107 aa; thioredoxin 4709479 2882781 ECA4212 Pectobacterium atrosepticum SCRI1043 thioredoxin YP_052299.1 4709153 R 218491 CDS YP_052300.1 50123133 2884634 4709598..4710890 1 NC_004547.2 enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation; ATP-dependent RNA helicase RhlB 4710890 rhlB 2884634 rhlB Pectobacterium atrosepticum SCRI1043 ATP-dependent RNA helicase RhlB YP_052300.1 4709598 D 218491 CDS YP_052301.1 50123134 2885504 4710897..4712393 1 NC_004547.2 catalyzes the conversion of guanosine 5'-triphosphate,3'-diphosphate (pppGpp) to guanosine 5'-diphosphate,3'-diphosphate (ppGpp); pppGpp and ppGpp control the stringent response during amino acid starvation; guanosine pentaphosphate phosphohydrolase 4712393 gppA 2885504 gppA Pectobacterium atrosepticum SCRI1043 guanosine pentaphosphate phosphohydrolase YP_052301.1 4710897 D 218491 CDS YP_052302.1 50123135 2885252 complement(4712411..4714432) 1 NC_004547.2 single-stranded DNA-dependent ATPase; initiates unwinding at a nick in the DNA; involved in DNA replication; ATP-dependent DNA helicase Rep 4714432 rep 2885252 rep Pectobacterium atrosepticum SCRI1043 ATP-dependent DNA helicase Rep YP_052302.1 4712411 R 218491 CDS YP_052303.1 50123136 2882818 4714592..4714873 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 peptidyl-prolyl cis-trans isomerase C PpiC or ParvA or b3775 or c4697 or z5286 or ecs4709 SWALL:PPIC_ECOLI (SWALL:P39159) (92 aa) fasta scores: E(): 2e-25, 71.73% id in 92 aa; peptidyl-prolyl cis-trans isomerase C 4714873 ppiC 2882818 ppiC Pectobacterium atrosepticum SCRI1043 peptidyl-prolyl cis-trans isomerase C YP_052303.1 4714592 D 218491 CDS YP_052304.1 50123137 2882674 complement(4714953..4718921) 1 NC_004547.2 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 4718921 putA 2882674 putA Pectobacterium atrosepticum SCRI1043 trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_052304.1 4714953 R 218491 CDS YP_052305.1 50123138 2882675 4719117..4720601 1 NC_004547.2 Similar to Escherichia coli sodium/proline symporter PutP or b1015 SWALL:PUTP_ECOLI (SWALL:P07117) (502 aa) fasta scores: E(): 3.3e-158, 80.93% id in 493 aa; sodium/proline symporter 4720601 putP 2882675 putP Pectobacterium atrosepticum SCRI1043 sodium/proline symporter YP_052305.1 4719117 D 218491 CDS YP_052306.1 50123139 2882782 complement(4720644..4721531) 1 NC_004547.2 Similar to Rhizobium loti probable transcriptional regulator mlr0244 SWALL:Q98N89 (EMBL:AP002994) (308 aa) fasta scores: E(): 2.1e-52, 49.83% id in 295 aa, and to Ralstonia solanacearum probable transcription regulator protein rsp1146 or rs05458 SWALL:Q8XQS3 (EMBL:AL646083) (298 aa) fasta scores: E(): 2e-47, 47.49% id in 299 aa; LysR family transcriptional regulator 4721531 2882782 ECA4219 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_052306.1 4720644 R 218491 CDS YP_052307.1 50123140 2882753 4721633..4722259 1 NC_004547.2 Similar to Streptomyces coelicolor hypothetical protein sco0965 or scm11.20C SWALL:Q9RIU2 (EMBL:AL939107) (219 aa) fasta scores: E(): 1.8e-24, 45.21% id in 188 aa, and to Rhizobium loti hypothetical protein Mll0243 SWALL:Q98N90 (EMBL:AP002994) (231 aa) fasta scores: E(): 4.1e-19, 40% id in 195 aa; hypothetical protein 4722259 2882753 ECA4220 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052307.1 4721633 D 218491 CDS YP_052308.1 50123141 2881794 complement(4722380..4723858) 1 NC_004547.2 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 4723858 ilvC 2881794 ilvC Pectobacterium atrosepticum SCRI1043 ketol-acid reductoisomerase YP_052308.1 4722380 R 218491 CDS YP_052309.1 50123142 2881788 4724026..4724916 1 NC_004547.2 participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; DNA-binding transcriptional regulator IlvY 4724916 ilvY 2881788 ilvY Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional regulator IlvY YP_052309.1 4724026 D 218491 CDS YP_052310.1 50123143 2882754 4724913..4725713 1 NC_004547.2 Similar to Shewanella oneidensis conserved hypothetical protein so0112 SWALL:AAN53199 (EMBL:AE015462) (207 aa) fasta scores: E(): 2.1e-05, 28.85% id in 201 aa, and to Xanthomonas axonopodis hypothetical protein Xac3205 SWALL:Q8PHP4 (EMBL:AE011966) (389 aa) fasta scores: E(): 6.4e-05, 26.4% id in 231 aa; hypothetical protein 4725713 2882754 ECA4223 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052310.1 4724913 D 218491 CDS YP_052311.1 50123144 2882755 complement(4725732..4726475) 1 NC_004547.2 Similar to Xanthomonas campestris hypothetical protein Xcc1550 SWALL:Q8PAD5 (EMBL:AE012256) (228 aa) fasta scores: E(): 2.8e-11, 27.6% id in 221 aa, and to Shewanella oneidensis conserved hypothetical protein so1579 SWALL:AAN54636 (EMBL:AE015603) (235 aa) fasta scores: E(): 3.3e-10, 24.65% id in 215 aa; hypothetical protein 4726475 2882755 ECA4224 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052311.1 4725732 R 218491 CDS YP_052312.1 50123145 2882281 complement(4726569..4728119) 1 NC_004547.2 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; threonine dehydratase 4728119 ilvA 2882281 ilvA Pectobacterium atrosepticum SCRI1043 threonine dehydratase YP_052312.1 4726569 R 218491 CDS YP_052313.1 50123146 2881795 complement(4728119..4729969) 1 NC_004547.2 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 4729969 ilvD 2881795 ilvD Pectobacterium atrosepticum SCRI1043 dihydroxy-acid dehydratase YP_052313.1 4728119 R 218491 CDS YP_052314.1 50123147 2881796 complement(4730043..4730969) 1 NC_004547.2 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 4730969 ilvE 2881796 ilvE Pectobacterium atrosepticum SCRI1043 branched-chain amino acid aminotransferase YP_052314.1 4730043 R 218491 CDS YP_052315.1 50123148 2881786 complement(4730994..4731254) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri acetolactate synthase isozyme II small subunit IlvM or b3769 or c4691 or sf3844 SWALL:ILVM_ECOLI (SWALL:P13048) (86 aa) fasta scores: E(): 1.8e-18, 63.52% id in 85 aa; acetolactate synthase 2 regulatory subunit 4731254 ilvM 2881786 ilvM Pectobacterium atrosepticum SCRI1043 acetolactate synthase 2 regulatory subunit YP_052315.1 4730994 R 218491 CDS YP_052316.1 50123149 2882124 complement(4731332..4732978) 1 NC_004547.2 catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; acetolactate synthase 2 catalytic subunit 4732978 ilvG 2882124 ilvG Pectobacterium atrosepticum SCRI1043 acetolactate synthase 2 catalytic subunit YP_052316.1 4731332 R 218491 CDS YP_052317.1 50123150 2882756 4733613..4735139 1 NC_004547.2 Similar to Haemophilus influenzae competence protein ComM or hi1117 SWALL:COMM_HAEIN (SWALL:P45049) (509 aa) fasta scores: E(): 2.2e-110, 64.22% id in 506 aa, and to Yersinia pestis magnesium chelatase family protein ypo3902 SWALL:Q8ZAA9 (EMBL:AJ414159) (507 aa) fasta scores: E(): 5e-130, 73.96% id in 507 aa; magnesium-chelatase 4735139 2882756 ECA4230 Pectobacterium atrosepticum SCRI1043 magnesium-chelatase YP_052317.1 4733613 D 218491 CDS YP_052318.1 50123151 2882274 complement(4735197..4735535) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri protein yife or b3764 or c4686 or z5276 or ecs4699 or sf3840 SWALL:AAN45278 (EMBL:M87049) (112 aa) fasta scores: E(): 2.1e-36, 79.46% id in 112 aa, and to Yersinia pestis hypothetical protein Ypo3903 SWALL:Q8ZAA8 (EMBL:AJ414159) (112 aa) fasta scores: E(): 7.3e-36, 81.25% id in 112 aa; hypothetical protein 4735535 2882274 ECA4231 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052318.1 4735197 R 218491 CDS YP_052319.1 50123152 2883110 4735656..4736483 1 NC_004547.2 Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon; transcriptional regulator HdfR 4736483 hdfR 2883110 hdfR Pectobacterium atrosepticum SCRI1043 transcriptional regulator HdfR YP_052319.1 4735656 D 218491 CDS YP_052320.1 50123153 2882275 complement(4736505..4737467) 1 NC_004547.2 membrane component of a sugar ABC transporter system; inner membrane ABC transporter permease YjfF 4737467 2882275 ECA4233 Pectobacterium atrosepticum SCRI1043 inner membrane ABC transporter permease YjfF YP_052320.1 4736505 R 218491 CDS YP_052321.1 50123154 2882276 complement(4737467..4738477) 1 NC_004547.2 Similar to Yersinia pestis sugar transport system permease ypo3906 or y0330 SWALL:AAM83921 (EMBL:AJ414159) (339 aa) fasta scores: E(): 1.4e-95, 83.89% id in 329 aa, and to Escherichia coli hypothetical ABC transporter permease protein ytft or b4230 SWALL:YTFT_ECOLI (SWALL:P39328) (341 aa) fasta scores: E(): 9.1e-79, 71.11% id in 322 aa; ABC transporter permease 4738477 2882276 ECA4234 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_052321.1 4737467 R 218491 CDS YP_052322.1 50123155 2882367 complement(4738464..4739990) 1 NC_004547.2 Similar to Yersinia pestis sugar transport system ATP-binding protein ypo3907 or y0329 SWALL:Q8ZAA4 (EMBL:AJ414159) (496 aa) fasta scores: E(): 1.2e-141, 79.51% id in 493 aa, and to Escherichia coli, and Escherichia coli O157:H7 hypothetical ABC transporter ATP-binding protein ytfr or b4228/b4429 or z5839 or ecs5206 SWALL:YTFR_ECOLI (SWALL:P39326) (500 aa) fasta scores: E(): 1.1e-118, 67.82% id in 491 aa; ABC transporter ATP-binding protein 4739990 2882367 ECA4235 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_052322.1 4738464 R 218491 CDS YP_052323.1 50123156 2882368 complement(4740175..4741131) 1 NC_004547.2 Similar to Escherichia coli ABC transporter periplasmic binding protein ytfq precursor ytfq or b4227 SWALL:YTFQ_ECOLI (SWALL:P39325) (318 aa) fasta scores: E(): 9.2e-84, 75.78% id in 318 aa, and to Yersinia pestis periplasmic protein ypo3908 or y0328 SWALL:AAM83919 (EMBL:AJ414159) (318 aa) fasta scores: E(): 9.3e-98, 88.36% id in 318 aa; ABC transporter periplasmic-binding protein 4741131 2882368 ECA4236 Pectobacterium atrosepticum SCRI1043 ABC transporter periplasmic-binding protein YP_052323.1 4740175 R 218491 CDS YP_052324.1 50123157 2882085 complement(4747351..4748208) 1 NC_004547.2 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 4748208 murI 2882085 murI Pectobacterium atrosepticum SCRI1043 glutamate racemase YP_052324.1 4747351 R 218491 CDS YP_052325.1 50123158 2885477 complement(4748153..4750000) 1 NC_004547.2 involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space; vitamin B12/cobalamin outer membrane transporter 4750000 btuB 2885477 btuB Pectobacterium atrosepticum SCRI1043 vitamin B12/cobalamin outer membrane transporter YP_052325.1 4748153 R 218491 CDS YP_052326.1 50123159 2884249 4750499..4751602 1 NC_004547.2 catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase 4751602 trmA 2884249 trmA Pectobacterium atrosepticum SCRI1043 tRNA (uracil-5-)-methyltransferase YP_052326.1 4750499 D 218491 CDS YP_052327.1 50123160 2882369 complement(4751643..4752029) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo3912 or y0323 SWALL:AAM83914 (EMBL:AJ414159) (135 aa) fasta scores: E(): 3e-29, 63.86% id in 119 aa, and to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 hypothetical protein yijd or b3964 or c4927 or z5525 or ecs4895 SWALL:YIJD_ECOLI (SWALL:P27308) (119 aa) fasta scores: E(): 4.3e-29, 65.48% id in 113 aa; hypothetical protein 4752029 2882369 ECA4240 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052327.1 4751643 R 218491 CDS YP_052328.1 50123161 2882370 complement(4752062..4752703) 1 NC_004547.2 negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis; DNA-binding transcriptional repressor FabR 4752703 2882370 ECA4241 Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional repressor FabR YP_052328.1 4752062 R 218491 CDS YP_052329.1 50123162 2884342 4752903..4754309 1 NC_004547.2 catalyzes the conversion of NADPH to NADH; soluble pyridine nucleotide transhydrogenase 4754309 sthA 2884342 sthA Pectobacterium atrosepticum SCRI1043 soluble pyridine nucleotide transhydrogenase YP_052329.1 4752903 D 218491 CDS YP_052330.1 50123163 2885410 complement(4754301..4755209) 1 NC_004547.2 Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA; DNA-binding transcriptional regulator OxyR 4755209 oxyR 2885410 oxyR Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional regulator OxyR YP_052330.1 4754301 R 218491 CDS YP_052331.1 50123164 2883948 complement(4755816..4756712) 1 NC_004547.2 MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor; 5,10-methylenetetrahydrofolate reductase 4756712 metF 2883948 metF Pectobacterium atrosepticum SCRI1043 5,10-methylenetetrahydrofolate reductase YP_052331.1 4755816 R 218491 CDS YP_052332.1 50123165 2882091 complement(4757242..4758003) 1 NC_004547.2 Similar to Comamonas acidovorans phosphodiesterase PdeA SWALL:Q8GMW5 (EMBL:AF548455) (263 aa) fasta scores: E(): 2.1e-33, 40.15% id in 254 aa, and to Rhizobium loti 3',5'-cyclic-nucleotide phosphodiesterase, cpda mll3631 SWALL:Q98FT1 (EMBL:AP003002) (305 aa) fasta scores: E(): 3.1e-48, 52.19% id in 251 aa; phosphodiesterase 4758003 pdeA 2882091 pdeA Pectobacterium atrosepticum SCRI1043 phosphodiesterase YP_052332.1 4757242 R 218491 CDS YP_052333.1 50123166 2882217 complement(4758051..4759055) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri ribose operon repressor RbsR or b3753 or c4681 or z5254 or ecs4695 or sf3836 SWALL:RBSR_ECOLI (SWALL:P25551) (329 aa) fasta scores: E(): 1.9e-18, 30.63% id in 333 aa, and to Rhizobium meliloti transcriptional regulator protein rb0352 or smb20366 SWALL:Q92WI7 (EMBL:AL603643) (334 aa) fasta scores: E(): 8.1e-42, 43.84% id in 317 aa; sugar binding transcriptional regulator 4759055 2882217 ECA4246 Pectobacterium atrosepticum SCRI1043 sugar binding transcriptional regulator YP_052333.1 4758051 R 218491 CDS YP_052334.1 50123167 2882218 complement(4759052..4759858) 1 NC_004547.2 Similar to Agrobacterium tumefaciens ABC transporter, membrane spanning protein atu4571 or agr_l_601 SWALL:Q8U783 (EMBL:AE009385) (288 aa) fasta scores: E(): 3.3e-27, 34.36% id in 259 aa, and to Yersinia pestis binding-protein-dependent transport system membrane protein ypo2030 or y2280 SWALL:AAM85839 (EMBL:AJ414151) (278 aa) fasta scores: E(): 4.1e-24, 30.62% id in 271 aa; ABC transporter permease 4759858 2882218 ECA4247 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_052334.1 4759052 R 218491 CDS YP_052335.1 50123168 2882219 complement(4759855..4760694) 1 NC_004547.2 Similar to Bradyrhizobium japonicum ABC transporter permease protein blr3545 SWALL:BAC48810 (EMBL:AP005948) (293 aa) fasta scores: E(): 1.5e-10, 26.61% id in 278 aa, and to Agrobacterium tumefaciens ABC transporter, membrane spanning protein atu4570 or agr_l_602 SWALL:Q8U784 (EMBL:AE009385) (285 aa) fasta scores: E(): 2e-10, 24.72% id in 275 aa; ABC transporter permease 4760694 2882219 ECA4248 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_052335.1 4759855 R 218491 CDS YP_052336.1 50123169 2882271 complement(4760764..4761897) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 maltose-binding periplasmic protein precursor MalE or b4034 or z5632 or ecs5017 SWALL:MALE_ECOLI (SWALL:P02928) (396 aa) fasta scores: E(): 0.00014, 26.87% id in 387 aa, and to Yersinia pestis ABC transporter periplasmic binding protein y2281 SWALL:AAM85840 (EMBL:AE013831) (360 aa) fasta scores: E(): 6.8e-13, 26.11% id in 337 aa; ABC transporter periplasmic-binding protein 4761897 2882271 ECA4249 Pectobacterium atrosepticum SCRI1043 ABC transporter periplasmic-binding protein YP_052336.1 4760764 R 218491 CDS YP_052337.1 50123170 2882272 complement(4761920..4763086) 1 NC_004547.2 Similar to Escherichia coli putrescine transport ATP-binding protein PotG or b0855 SWALL:POTG_ECOLI (SWALL:P31134) (377 aa) fasta scores: E(): 1.2e-43, 41.97% id in 355 aa, and to Bradyrhizobium japonicum ABC transporter ATP-binding protein bll7196 SWALL:BAC52461 (EMBL:AP005961) (365 aa) fasta scores: E(): 1e-45, 44.02% id in 318 aa, and to Rhizobium meliloti ABC transporter, ATP-binding protein ra1191 or sma2207 SWALL:Q92XQ3 (EMBL:AE007304) (361 aa) fasta scores: E(): 1.5e-45, 43.42% id in 350 aa; ABC transporter ATP-binding protein 4763086 2882272 ECA4250 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_052337.1 4761920 R 218491 CDS YP_052338.1 50123171 2883540 complement(4763293..4765728) 1 NC_004547.2 multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; bifunctional aspartate kinase II/homoserine dehydrogenase II 4765728 metL 2883540 metL Pectobacterium atrosepticum SCRI1043 bifunctional aspartate kinase II/homoserine dehydrogenase II YP_052338.1 4763293 R 218491 CDS YP_052339.1 50123172 2883958 complement(4765731..4766891) 1 NC_004547.2 catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; cystathionine gamma-synthase 4766891 metB 2883958 metB Pectobacterium atrosepticum SCRI1043 cystathionine gamma-synthase YP_052339.1 4765731 R 218491 CDS YP_052340.1 50123173 2883941 4767078..4767395 1 NC_004547.2 when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; transcriptional repressor protein MetJ 4767395 metJ 2883941 metJ Pectobacterium atrosepticum SCRI1043 transcriptional repressor protein MetJ YP_052340.1 4767078 D 218491 CDS YP_052341.1 50123174 2882273 4767603..4768400 1 NC_004547.2 Similar to Escherichia coli ferrichrome transport ATP-binding protein FhuC or b0151 SWALL:FHUC_ECOLI (SWALL:P07821) (265 aa) fasta scores: E(): 1.2e-25, 37.5% id in 256 aa, and to Brucella melitensis iron(III) dicitrate transport ATP-binding protein bmeii0537 SWALL:Q8YCJ1 (EMBL:AE009689) (264 aa) fasta scores: E(): 6e-28, 42.21% id in 244 aa; iron(III) ABC transporter ATP-binding protein 4768400 2882273 ECA4254 Pectobacterium atrosepticum SCRI1043 iron(III) ABC transporter ATP-binding protein YP_052341.1 4767603 D 218491 CDS YP_052342.1 50123175 2882445 4768410..4769372 1 NC_004547.2 Similar to Rhizobium loti iron(III) ABC transporter, periplasmic-binding protein mlr8228 SWALL:Q983Q2 (EMBL:AP003013) (315 aa) fasta scores: E(): 8e-77, 62.38% id in 319 aa, and to Pseudomonas aeruginosa hypothetical protein Pa2913 pa2913 SWALL:Q9HZT4 (EMBL:AE004717) (323 aa) fasta scores: E(): 1.3e-50, 45.57% id in 316 aa; iron(III) ABC transporter periplasmic-binding protein 4769372 2882445 ECA4255 Pectobacterium atrosepticum SCRI1043 iron(III) ABC transporter periplasmic-binding protein YP_052342.1 4768410 D 218491 CDS YP_052343.1 50123176 2882446 4769378..4770382 1 NC_004547.2 Similar to Bordetella avium BhuU bhuU SWALL:Q8L1U4 (EMBL:AY095952) (334 aa) fasta scores: E(): 1.1e-33, 38.8% id in 317 aa, and to Rhizobium loti ABC transporter, permease protein mlr8229 SWALL:Q983Q1 (EMBL:AP003013) (349 aa) fasta scores: E(): 1.3e-61, 54.4% id in 329 aa; iron(III) ABC transporter permease 4770382 2882446 ECA4256 Pectobacterium atrosepticum SCRI1043 iron(III) ABC transporter permease YP_052343.1 4769378 D 218491 CDS YP_052344.1 50123177 2884494 complement(4770469..4770684) 1 NC_004547.2 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 4770684 rpmE 2884494 rpmE Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L31 YP_052344.1 4770469 R 218491 CDS YP_052345.1 50123178 2882310 4770998..4773196 1 NC_004547.2 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 4773196 priA 2882310 priA Pectobacterium atrosepticum SCRI1043 primosome assembly protein PriA YP_052345.1 4770998 D 218491 CDS YP_052346.1 50123179 2882626 4773468..4774511 1 NC_004547.2 negatively controls the transcription initiation of genes such as deoCABD, udp, and cdd encoding catabolizing enzymes and nupC, nupG, and tsx encoding transporting and pore-forming proteins; DNA-binding transcriptional regulator CytR 4774511 cytR 2882626 cytR Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional regulator CytR YP_052346.1 4773468 D 218491 CDS YP_052347.1 50123180 2883715 4774820..4775677 1 NC_004547.2 Similar to Escherichia coli cell division protein FtsN or MsgA or b3933 SWALL:FTSN_ECOLI (SWALL:P29131) (319 aa) fasta scores: E(): 9.1e-25, 50.63% id in 314 aa; cell division protein FtsN 4775677 ftsN 2883715 ftsN Pectobacterium atrosepticum SCRI1043 cell division protein FtsN YP_052347.1 4774820 D 218491 CDS YP_052348.1 50123181 2883837 4775884..4776414 1 NC_004547.2 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 4776414 hslV 2883837 hslV Pectobacterium atrosepticum SCRI1043 ATP-dependent protease peptidase subunit YP_052348.1 4775884 D 218491 CDS YP_052349.1 50123182 2884053 4776424..4777755 1 NC_004547.2 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 4777755 hslU 2884053 hslU Pectobacterium atrosepticum SCRI1043 ATP-dependent protease ATP-binding subunit HslU YP_052349.1 4776424 D 218491 CDS YP_052350.1 50123183 2884910 4777900..4778817 1 NC_004547.2 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 4778817 menA 2884910 menA Pectobacterium atrosepticum SCRI1043 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_052350.1 4777900 D 218491 CDS YP_052351.1 50123184 2885720 4778952..4779437 1 NC_004547.2 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; ribonuclease activity regulator protein RraA 4779437 menG 2885720 menG Pectobacterium atrosepticum SCRI1043 ribonuclease activity regulator protein RraA YP_052351.1 4778952 D 218491 CDS YP_052352.1 50123185 2882447 complement(4779555..4779794) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo0093 or y0045 SWALL:AAM83640 (EMBL:AJ414141) (79 aa) fasta scores: E(): 1.4e-20, 88.6% id in 79 aa, and to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri hypothetical protein yiiu or b3928 or c4880 or z5473 or ecs4853 or sf4006 SWALL:YIIU_ECOLI (SWALL:P32164) (81 aa) fasta scores: E(): 4.8e-17, 78.48% id in 79 aa; hypothetical protein 4779794 2882447 ECA4265 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052352.1 4779555 R 218491 CDS YP_052353.1 50123186 2881387 4780345..4781184 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 glycerol uptake facilitator protein GlpF or b3927 or c4879 or z5472 or ecs4852 SWALL:GLPF_ECOLI (SWALL:P11244) (281 aa) fasta scores: E(): 4.4e-90, 80.71% id in 280 aa; glycerol uptake facilitator protein 4781184 glpF 2881387 glpF Pectobacterium atrosepticum SCRI1043 glycerol uptake facilitator protein YP_052353.1 4780345 D 218491 CDS YP_052354.1 50123187 2881389 4781238..4782749 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 glycerol kinase GlpK or b3926 or z5471 or ecs4851 SWALL:GLPK_ECOLI (SWALL:P08859) (501 aa) fasta scores: E(): 6.5e-179, 85.97% id in 499 aa; glycerol kinase 4782749 glpK 2881389 glpK Pectobacterium atrosepticum SCRI1043 glycerol kinase YP_052354.1 4781238 D 218491 CDS YP_052355.1 50123188 2881963 4782875..4783885 1 NC_004547.2 type II fructose 1,6-bisphosphatae; in Escherichia coli this protein forms a dimer and binds manganese; fructose 1,6-bisphosphatase II 4783885 glpX 2881963 glpX Pectobacterium atrosepticum SCRI1043 fructose 1,6-bisphosphatase II YP_052355.1 4782875 D 218491 CDS YP_052356.1 50123189 2885171 4784192..4784938 1 NC_004547.2 Similar to Escherichia coli ferredoxin--NADP reductase Fpr or MvrA or b3924 SWALL:FENR_ECOLI (SWALL:P28861) (247 aa) fasta scores: E(): 1e-75, 76.11% id in 247 aa; ferredoxin-NADP reductase 4784938 fpr 2885171 fpr Pectobacterium atrosepticum SCRI1043 ferredoxin-NADP reductase YP_052356.1 4784192 D 218491 CDS YP_052357.1 50123190 2882448 complement(4784957..4785379) 1 NC_004547.2 Similar to Yersinia pestis conserved membrane protein ypo0087 SWALL:Q8ZJK7 (EMBL:AJ414141) (144 aa) fasta scores: E(): 5.8e-43, 66.66% id in 138 aa, and to Salmonella typhimurium, and Salmonella typhi inner membrane protein yiir or stm4083 or sty3787 SWALL:Q8XFX4 (EMBL:AE008890) (142 aa) fasta scores: E(): 8.1e-38, 60.43% id in 139 aa; hypothetical protein 4785379 2882448 ECA4270 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052357.1 4784957 R 218491 CDS YP_052358.1 50123191 2882389 4785577..4786176 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo0086 SWALL:Q8ZJK8 (EMBL:AJ414141) (211 aa) fasta scores: E(): 5.1e-34, 59.39% id in 197 aa, and to Escherichia coli hypothetical protein yiiq precursor yiiq or b3920 SWALL:YIIQ_ECOLI (SWALL:P32160) (199 aa) fasta scores: E(): 1e-33, 56.84% id in 190 aa; hypothetical protein 4786176 2882389 ECA4271 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052358.1 4785577 D 218491 CDS YP_052359.1 50123192 2884259 4786326..4787093 1 NC_004547.2 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 4787093 tpiA 2884259 tpiA Pectobacterium atrosepticum SCRI1043 triosephosphate isomerase YP_052359.1 4786326 D 218491 CDS YP_052360.1 50123193 2882390 complement(4787304..4788410) 1 NC_004547.2 catalyzes the formation of carbamoylputrescine from agmatine in the arginine decarboxylase pathway of putrescine biosynthesis; agmatine deiminase 4788410 2882390 ECA4273 Pectobacterium atrosepticum SCRI1043 agmatine deiminase YP_052360.1 4787304 R 218491 CDS YP_052361.1 50123194 2882391 complement(4788411..4789295) 1 NC_004547.2 Similar to Yersinia pestis carbon-nitrogen hydrolase ypo0938 or y3324 SWALL:Q8ZHG1 (EMBL:AJ414145) (294 aa) fasta scores: E(): 2.8e-116, 93.87% id in 294 aa, and to Pseudomonas aeruginosa probable hydratase pa0293 SWALL:Q9I6J8 (EMBL:AE004467) (292 aa) fasta scores: E(): 4.5e-79, 65.05% id in 289 aa; carbon-nitrogen hydrolase 4789295 2882391 ECA4274 Pectobacterium atrosepticum SCRI1043 carbon-nitrogen hydrolase YP_052361.1 4788411 R 218491 CDS YP_052362.1 50123195 2882510 4790053..4790571 1 NC_004547.2 Similar to Vibrio cholerae hcp=28 kDa secreted hydrophilic protein (HcpA or vca0017) and (hcp or vc1415) SWALL:P72350 (EMBL:S81006) (172 aa) fasta scores: E(): 4.3e-56, 78.48% id in 172 aa, and to Yersinia pestis hypothetical protein ypo3708 ypo3708 or y0036 SWALL:AAM83631 (EMBL:AJ414158) (172 aa) fasta scores: E(): 9.6e-60, 81.39% id in 172 aa. The Yersinia pestis orthologue of this gene is described as a hemolysin co-regulated protein. Also similar to ECA3428 (99.419% identity in 172aa overlap) and ECA2866 (94.767% identity in 172aa overlap).; hypothetical protein 4790571 2882510 ECA4275 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052362.1 4790053 D 218491 CDS YP_052363.1 50123196 2882511 4790693..4792522 1 NC_004547.2 Similar to Photorhabdus luminescens VgrG SWALL:AAN64196 (EMBL:AY144117) (631 aa) fasta scores: E(): 3.4e-130, 53.79% id in 606 aa, and to Yersinia pestis rhs accessory genetic element ypo3606 or y0268 SWALL:AAM83862 (EMBL:AJ414158) (800 aa) fasta scores: E(): 2.2e-123, 51.03% id in 629 aa; Rhs-family protein 4792522 2882511 ECA4276 Pectobacterium atrosepticum SCRI1043 Rhs-family protein YP_052363.1 4790693 D 218491 CDS YP_052364.1 50123197 2882512 4792551..4792997 1 NC_004547.2 Similar to Photorhabdus luminescens Orf5 orf5 SWALL:AAN64197 (EMBL:AY144117) (139 aa) fasta scores: E(): 5.6e-26, 53.33% id in 135 aa, and to Escherichia coli O157:H7 hypothetical protein z0706 z0706 or ecs0606 SWALL:Q8XBY6 (EMBL:AE005236) (153 aa) fasta scores: E(): 1.6e-15, 41.54% id in 142 aa; hypothetical protein 4792997 2882512 ECA4277 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052364.1 4792551 D 218491 CDS YP_052365.1 50123198 2882513 4792990..4797273 1 NC_004547.2 Similar to Photorhabdus luminescens Rhs Rhs-corE SWALL:AAN64198 (EMBL:AY144117) (1469 aa) fasta scores: E(): 3.6e-127, 42.61% id in 1361 aa, and to Escherichia coli O157:H7 rhs core protein with extension ecs0605 SWALL:Q8X2J4 (EMBL:AP002552) (1616 aa) fasta scores: E(): 3.9e-80, 37.61% id in 1361 aa; Rhs-family protein 4797273 2882513 ECA4278 Pectobacterium atrosepticum SCRI1043 Rhs-family protein YP_052365.1 4792990 D 218491 CDS YP_052366.1 50123199 2881935 4797274..4797585 1 NC_004547.2 hypothetical protein 4797585 2881935 ECA4279 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052366.1 4797274 D 218491 CDS YP_052367.1 50123200 2881936 complement(4797653..4797877) 1 NC_004547.2 Similar to Yersinia pestis hypothetical y0261 SWALL:AAM83855 (EMBL:AE013626) (74 aa) fasta scores: E(): 1.4e-15, 60.81% id in 74 aa, and to Photorhabdus luminescens Orf8 orf8 SWALL:AAN64200 (EMBL:AY144117) (106 aa) fasta scores: E(): 1e-08, 52.17% id in 69 aa; hypothetical protein 4797877 2881936 ECA4280 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052367.1 4797653 R 218491 CDS YP_052368.1 50123201 2881937 complement(4797948..4798346) 1 NC_004547.2 Similar to Vibrio phage CTX RstR SWALL:Q8LTJ3 (EMBL:AF511000) (112 aa) fasta scores: E(): 2.7e-06, 33.63% id in 110 aa, and to Photorhabdus luminescens Orf9 SWALL:AAN64201 (EMBL:AY144117) (130 aa) fasta scores: E(): 1.5e-10, 34.42% id in 122 aa; phage regulatory protein 4798346 2881937 ECA4281 Pectobacterium atrosepticum SCRI1043 phage regulatory protein YP_052368.1 4797948 R 218491 CDS YP_052369.1 50123202 2881640 4798448..4801366 1 NC_004547.2 Similar to Photorhabdus luminescens DnaG primase-like DnaG SWALL:AAN64202 (EMBL:AY144117) (925 aa) fasta scores: E(): 1e-213, 73.54% id in 926 aa, and to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri DNA primase DnaG or DnaP or ParB or b3066 or z4419 or ecs3949 or sf3107 SWALL:PRIM_ECOLI (SWALL:P02923) (581 aa) fasta scores: E(): 1.8e-13, 27.62% id in 438 aa. Also similar to ECA3390, (79.939% id), ECA3400 (84.394% id), ECA3407 (87.010% id), ECA3416 (87.010% id), and to ECA4291 (100.000% id).; DnaG primase-like protein 4801366 2881640 ECA4282 Pectobacterium atrosepticum SCRI1043 DnaG primase-like protein YP_052369.1 4798448 D 218491 CDS YP_052370.1 50123203 2881641 4801426..4802478 1 NC_004547.2 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 4802478 xerC 2881641 xerC Pectobacterium atrosepticum SCRI1043 site-specific tyrosine recombinase XerC YP_052370.1 4801426 D 218491 CDS YP_052371.1 50123204 2881642 4802505..4802723 1 NC_004547.2 hypothetical protein 4802723 2881642 ECA4284 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052371.1 4802505 D 218491 CDS YP_052372.1 50123205 2882024 4802781..4803176 1 NC_004547.2 hypothetical protein 4803176 2882024 ECA4285 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052372.1 4802781 D 218491 CDS YP_052373.1 50123206 2882025 4803225..4803392 1 NC_004547.2 hypothetical protein 4803392 2882025 ECA4286 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052373.1 4803225 D 218491 CDS YP_052374.1 50123207 2882026 4803540..4803905 1 NC_004547.2 hypothetical protein 4803905 2882026 ECA4287 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052374.1 4803540 D 218491 CDS YP_052375.1 50123208 2882027 4803906..4804217 1 NC_004547.2 hypothetical protein 4804217 2882027 ECA4288 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052375.1 4803906 D 218491 CDS YP_052376.1 50123209 2881628 complement(4804285..4804509) 1 NC_004547.2 Similar to Yersinia pestis hypothetical y0261 SWALL:AAM83855 (EMBL:AE013626) (74 aa) fasta scores: E(): 1.4e-15, 60.81% id in 74 aa, and to Photorhabdus luminescens Orf8 SWALL:AAN64200 (EMBL:AY144117) (106 aa) fasta scores: E(): 1e-08, 52.17% id in 69 aa; hypothetical protein 4804509 2881628 ECA4289 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052376.1 4804285 R 218491 CDS YP_052377.1 50123210 2881629 complement(4804580..4804978) 1 NC_004547.2 Similar to Vibrio phage CTX RstR SWALL:Q8LTJ3 (EMBL:AF511000) (112 aa) fasta scores: E(): 2.7e-06, 33.63% id in 110 aa, and to Photorhabdus luminescens Orf9 SWALL:AAN64201 (EMBL:AY144117) (130 aa) fasta scores: E(): 1.5e-10, 34.42% id in 122 aa; phage regulatory protein 4804978 2881629 ECA4290 Pectobacterium atrosepticum SCRI1043 phage regulatory protein YP_052377.1 4804580 R 218491 CDS YP_052378.1 50123211 2881630 4805080..4807998 1 NC_004547.2 Similar to Photorhabdus luminescens DnaG primase-like DnaG SWALL:AAN64202 (EMBL:AY144117) (925 aa) fasta scores: E(): 1e-213, 73.54% id in 926 aa, and to Escherichia coli, Escherichia coli O157:H7, and Shigella flexneri DNA primase DnaG or DnaP or ParB or b3066 or z4419 or ecs3949 or sf3107 SWALL:PRIM_ECOLI (SWALL:P02923) (581 aa) fasta scores: E(): 1.8e-13, 27.62% id in 438 aa. Also similar to ECA3390, (79.939% id), ECA3400 (84.394% id), ECA3407 (87.010% id), ECA3416 (87.010% id), and to ECA4282 (100.000% id).; DnaG primase-like protein 4807998 2881630 ECA4291 Pectobacterium atrosepticum SCRI1043 DnaG primase-like protein YP_052378.1 4805080 D 218491 CDS YP_052379.1 50123212 2881502 4808058..4809110 1 NC_004547.2 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; site-specific tyrosine recombinase XerC 4809110 xerC 2881502 xerC Pectobacterium atrosepticum SCRI1043 site-specific tyrosine recombinase XerC YP_052379.1 4808058 D 218491 CDS YP_052380.1 50123213 2881503 4810142..4810594 1 NC_004547.2 Similar to the C-terminal region of Bacillus halodurans hypothetical protein Bh2341 SWALL:Q9KAE6 (EMBL:AP001515) (271 aa) fasta scores: E(): 4.2e-21, 51.66% id in 120 aa; hypothetical protein 4810594 2881503 ECA4293 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052380.1 4810142 D 218491 CDS YP_052381.1 50123214 2881504 4810594..4811115 1 NC_004547.2 Similar to Clostridium acetobutylicum hypothetical cf-21 family protein Cac0348 SWALL:Q97M52 (EMBL:AE007549) (164 aa) fasta scores: E(): 0.37, 24.24% id in 165 aa; hypothetical protein 4811115 2881504 ECA4294 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052381.1 4810594 D 218491 CDS YP_052382.1 50123215 2881505 complement(4811200..4811412) 1 NC_004547.2 Similar to Yersinia pestis hypothetical y0261 SWALL:Q8CLT6 (EMBL:AE013626) (74 aa) fasta scores: E(): 1.4e-10, 60.34% id in 58 aa, and to Photorhabdus luminescens Orf8 SWALL:Q8GDM5 (EMBL:AY144117) (106 aa) fasta scores: E(): 0.0069, 49.05% id in 53 aa; hypothetical protein 4811412 2881505 ECA4295 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052382.1 4811200 R 218491 CDS YP_052383.1 50123216 2881976 complement(4811680..4812444) 1 NC_004547.2 Similar to Pseudomonas putida AtsC SWALL:Q9WWU7 (EMBL:AF126201) (287 aa) fasta scores: E(): 3.8e-47, 57.02% id in 242 aa, and to Bacillus subtilis aliphatic sulfonates transport ATP-binding protein SsuB SWALL:SSUB_BACSU (SWALL:P97027) (274 aa) fasta scores: E(): 1.1e-35, 45.88% id in 231 aa; sulfate ester ABC transporter ATP-binding protein 4812444 atsC 2881976 atsC Pectobacterium atrosepticum SCRI1043 sulfate ester ABC transporter ATP-binding protein YP_052383.1 4811680 R 218491 CDS YP_052384.1 50123217 2882890 complement(4812441..4814072) 1 NC_004547.2 Similar to Pseudomonas putida AtsB SWALL:Q9R9W6 (EMBL:AF126201) (535 aa) fasta scores: E(): 2e-89, 51.46% id in 513 aa, and to Bacillus subtilis aliphatic sulfonates transport permease protein SsuC ssuC SWALL:SSUC_BACSU (SWALL:P40401) (276 aa) fasta scores: E(): 2.1e-26, 36.82% id in 239 aa; sulfate ester ABC transporter permease 4814072 astB 2882890 astB Pectobacterium atrosepticum SCRI1043 sulfate ester ABC transporter permease YP_052384.1 4812441 R 218491 CDS YP_052385.1 50123218 2884833 complement(4814072..4814473) 1 NC_004547.2 Similar to Neisseria meningitidis biopolymer transport ExbD protein ExbD or nma1983 or nmb1728 SWALL:EXBD_NEIMA (SWALL:P95376) (144 aa) fasta scores: E(): 3.9e-13, 38.57% id in 140 aa, and to Pseudomonas aeruginosa ExbD or ExbD1 or pa0199 SWALL:Q9RMT1 (EMBL:AF190125) (133 aa) fasta scores: E(): 1.8e-24, 55.63% id in 133 aa; biopolymer transport protein 4814473 2884833 ECA4298 Pectobacterium atrosepticum SCRI1043 biopolymer transport protein YP_052385.1 4814072 R 218491 CDS YP_052386.1 50123219 2884834 complement(4814475..4815197) 1 NC_004547.2 Similar to Neisseria meningitidis biopolymer transport ExbB protein ExbB or nma1984 or nmb1729 SWALL:EXBB_NEIMA (SWALL:P57027) (220 aa) fasta scores: E(): 4.3e-20, 40.3% id in 196 aa, and to Pseudomonas aeruginosa ExbB or ExbB1 or pa0198 SWALL:Q9RMT2 (EMBL:AF190125) (239 aa) fasta scores: E(): 2.1e-44, 58.57% id in 239 aa; biopolymer transport protein 4815197 2884834 ECA4299 Pectobacterium atrosepticum SCRI1043 biopolymer transport protein YP_052386.1 4814475 R 218491 CDS YP_052387.1 50123220 2884260 complement(4815202..4816065) 1 NC_004547.2 Similar to Pseudomonas aeruginosa TonB2 protein TonB2 or pa0197 SWALL:Q9RMT3 (EMBL:AF190125) (270 aa) fasta scores: E(): 6.3e-17, 43.79% id in 290 aa, and to Bordetella bronchiseptica TonB SWALL:Q9ZG18 (EMBL:AF087669) (268 aa) fasta scores: E(): 5.5e-09, 33.2% id in 265 aa; TonB protein 4816065 tonB 2884260 tonB Pectobacterium atrosepticum SCRI1043 TonB protein YP_052387.1 4815202 R 218491 CDS YP_052388.1 50123221 2882169 4816504..4817511 1 NC_004547.2 Similar to Pseudomonas aeruginosa sulfate ester binding protein AstR or pa0186 SWALL:O33416 (EMBL:Z48540) (353 aa) fasta scores: E(): 2.4e-58, 51.18% id in 338 aa, and to Pseudomonas putida AtsR WALL:Q9WWU6 (EMBL:AF126201) (347 aa) fasta scores: E(): 9.8e-56, 49.85% id in 337 aa; sulfate ester binding protein 4817511 atsR 2882169 atsR Pectobacterium atrosepticum SCRI1043 sulfate ester binding protein YP_052388.1 4816504 D 218491 CDS YP_052389.1 50123222 2884396 4817598..4819883 1 NC_004547.2 Similar to Pseudomonas putida SftP SWALL:Q9R9W7 (EMBL:AF126201) (778 aa) fasta scores: E(): 5e-33, 37.71% id in 753 aa, and to Xanthomonas axonopodis TonB-dependent receptor FyuA or xac1143 SWALL:Q8PND0 (EMBL:AE011742) (804 aa) fasta scores: E(): 1.7e-22, 23.65% id in 782 aa; TonB-dependent receptor 4819883 sftP 2884396 sftP Pectobacterium atrosepticum SCRI1043 TonB-dependent receptor YP_052389.1 4817598 D 218491 CDS YP_052390.1 50123223 2884835 4819888..4822662 1 NC_004547.2 Similar to Streptomyces coelicolor hypothetical protein sco1536 or scl2.26C SWALL:Q9L273 (EMBL:AL939109) (822 aa) fasta scores: E(): 4e-150, 48.64% id in 847 aa, and to Bacillus subtilis YetA protein SWALL:O31530 (EMBL:Z99107) (857 aa) fasta scores: E(): 4.1e-50, 34.15% id in 887 aa; hypothetical protein 4822662 2884835 ECA4303 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052390.1 4819888 D 218491 CDS YP_052391.1 50123224 2884625 4822698..4823390 1 NC_004547.2 hypothetical protein 4823390 2884625 ECA4304 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052391.1 4822698 D 218491 CDS YP_052392.1 50123225 2884398 complement(4823377..4824306) 1 NC_004547.2 Similar to Pseudomonas putida SftR SWALL:Q9WWU4 (EMBL:AF126201) (304 aa) fasta scores: E(): 6.9e-58, 50.82% id in 303 aa, and to Pseudomonas sp. SDS degradation transcriptional activation protein SdsB SWALL:SDSB_PSES9 (SWALL:P52686) (306 aa) fasta scores: E(): 2.3e-29, 37.58% id in 314 aa; LysR family transcriptional regulator 4824306 sftR 2884398 sftR Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_052392.1 4823377 R 218491 CDS YP_052393.1 50123226 2884626 complement(4824558..4824764) 1 NC_004547.2 hypothetical protein 4824764 2884626 ECA4306 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052393.1 4824558 R 218491 CDS YP_052394.1 50123227 2885133 complement(4824827..4825789) 1 NC_004547.2 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; 6-phosphofructokinase 4825789 pfkA 2885133 pfkA Pectobacterium atrosepticum SCRI1043 6-phosphofructokinase YP_052394.1 4824827 R 218491 CDS YP_052395.1 50123228 2881441 complement(4825997..4826899) 1 NC_004547.2 member of cation diffusion facilitator family; CDF; membrane-bound; induced by both zinc and iron, but does not induce resistance to zinc; can transport zinc(II) in a proton-dependent manner; instead this protein induces iron resistance; forms dimers; ferrous iron efflux protein F 4826899 fieF 2881441 fieF Pectobacterium atrosepticum SCRI1043 ferrous iron efflux protein F YP_052395.1 4825997 R 218491 CDS YP_052396.1 50123229 2884370 complement(4826943..4828130) 1 NC_004547.2 Similar to Erwinia chrysanthemi sugar efflux transporter B SotB SWALL:SOTB_ERWCH (SWALL:Q9S3J9) (395 aa) fasta scores: E(): 4.8e-85, 61.85% id in 388 aa, and to Escherichia coli sugar efflux transporter SotB or b1528 SWALL:SOTB_ECOLI (SWALL:P31122) (396 aa) fasta scores: E(): 1e-82, 61.55% id in 385 aa; sugar efflux transporter 4828130 sotB 2884370 sotB Pectobacterium atrosepticum SCRI1043 sugar efflux transporter YP_052396.1 4826943 R 218491 CDS YP_052397.1 50123230 2884944 complement(4828523..4829047) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Shigella flexneri periplasmic protein cpxp precursor CpxP or b3913/b3914 or c4865 or sf3992 SWALL:CPXP_ECOLI (SWALL:P32158) (166 aa) fasta scores: E(): 6.2e-20, 50% id in 140 aa; stress resistance protein 4829047 cpxP 2884944 cpxP Pectobacterium atrosepticum SCRI1043 stress resistance protein YP_052397.1 4828523 R 218491 CDS YP_052398.1 50123231 2884945 4829201..4829899 1 NC_004547.2 response regulator in two-component regulatory system with CpxA; part of the envelope stress response system; DNA-binding transcriptional regulator CpxR 4829899 cpxR 2884945 cpxR Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional regulator CpxR YP_052398.1 4829201 D 218491 CDS YP_052399.1 50123232 2884948 4829896..4831266 1 NC_004547.2 part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors; two-component sensor protein 4831266 cpxA 2884948 cpxA Pectobacterium atrosepticum SCRI1043 two-component sensor protein YP_052399.1 4829896 D 218491 CDS YP_052400.1 50123233 2884627 4831431..4833599 1 NC_004547.2 Similar to Pseudomonas aeruginosa hypothetical protein Pa5441 SWALL:Q9HTC5 (EMBL:AE004957) (733 aa) fasta scores: E(): 4.1e-70, 35.82% id in 748 aa, and to Yersinia pestis hypothetical protein ypo0870 or y3254 SWALL:Q8ZHM1 (EMBL:AJ414145) (774 aa) fasta scores: E(): 2.3e-94, 41.84% id in 736 aa; hypothetical protein 4833599 2884627 ECA4313 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052400.1 4831431 D 218491 CDS YP_052401.1 50123234 2884585 4833608..4834378 1 NC_004547.2 Similar to Yersinia pestis hypothetical y3253 SWALL:Q8CKN3 (EMBL:AE013927) (255 aa) fasta scores: E(): 2.6e-44, 48.56% id in 243 aa; hypothetical protein 4834378 2884585 ECA4314 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052401.1 4833608 D 218491 CDS YP_052402.1 50123235 2884586 complement(4834403..4834867) 1 NC_004547.2 Similar to Shewanella oneidensis RNA methyltransferase, TrmH family, group 2 so4529 SWALL:AAN57492 (EMBL:AE015885) (154 aa) fasta scores: E(): 1.6e-40, 73.33% id in 150 aa, and to Vibrio vulnificus predicted rRNA methylase vv11251 SWALL:AAO09707 (EMBL:AE016801) (157 aa) fasta scores: E(): 4.8e-36, 67.97% id in 153 aa; RNA-methyltransferase 4834867 2884586 ECA4315 Pectobacterium atrosepticum SCRI1043 RNA-methyltransferase YP_052402.1 4834403 R 218491 CDS YP_052403.1 50123236 2884587 4835189..4835485 1 NC_004547.2 hypothetical protein 4835485 2884587 ECA4316 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052403.1 4835189 D 218491 CDS YP_052404.1 50123237 2884588 complement(4835498..4836454) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo3791 SWALL:Q8ZAL0 (EMBL:AJ414159) (308 aa) fasta scores: E(): 3.3e-84, 74.49% id in 298 aa, and to Bradyrhizobium japonicum Blr7387 protein blr7387 SWALL:BAC52652 (EMBL:AP005962) (314 aa) fasta scores: E(): 2.2e-23, 31.73% id in 312 aa; transporter 4836454 2884588 ECA4317 Pectobacterium atrosepticum SCRI1043 transporter YP_052404.1 4835498 R 218491 CDS YP_052405.1 50123238 2884205 complement(4836659..4837408) 1 NC_004547.2 hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; glycerophosphodiester phosphodiesterase 4837408 ugpQ 2884205 ugpQ Pectobacterium atrosepticum SCRI1043 glycerophosphodiester phosphodiesterase YP_052405.1 4836659 R 218491 CDS YP_052406.1 50123239 2884203 complement(4837408..4838481) 1 NC_004547.2 part of the UgpABCE glycerol-3-phosphate uptake system; glycerol-3-phosphate transporter ATP-binding subunit 4838481 ugpC 2884203 ugpC Pectobacterium atrosepticum SCRI1043 glycerol-3-phosphate transporter ATP-binding subunit YP_052406.1 4837408 R 218491 CDS YP_052407.1 50123240 2884204 complement(4838507..4839358) 1 NC_004547.2 with UgpABC is involved in uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter membrane protein 4839358 ugpE 2884204 ugpE Pectobacterium atrosepticum SCRI1043 glycerol-3-phosphate transporter membrane protein YP_052407.1 4838507 R 218491 CDS YP_052408.1 50123241 2884208 complement(4839379..4840266) 1 NC_004547.2 with UgpEC is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter permease 4840266 ugpA 2884208 ugpA Pectobacterium atrosepticum SCRI1043 glycerol-3-phosphate transporter permease YP_052408.1 4839379 R 218491 CDS YP_052409.1 50123242 2884209 complement(4840339..4841673) 1 NC_004547.2 with UgpACE is involved in the uptake of glycerol-3-phosphate; glycerol-3-phosphate transporter periplasmic-binding protein 4841673 ugpB 2884209 ugpB Pectobacterium atrosepticum SCRI1043 glycerol-3-phosphate transporter periplasmic-binding protein YP_052409.1 4840339 R 218491 CDS YP_052410.1 50123243 2884788 complement(4841929..4842345) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1620 or y1780 SWALL:Q8ZFR8 (EMBL:AJ414149) (137 aa) fasta scores: E(): 5.7e-33, 60.58% id in 137 aa; hypothetical protein 4842345 2884788 ECA4323 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052410.1 4841929 R 218491 CDS YP_052411.1 50123244 2884789 complement(4842347..4843042) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo1619 or y1779 SWALL:AAM85347 (EMBL:AJ414149) (189 aa) fasta scores: E(): 8.4e-51, 70.21% id in 188 aa, and to Escherichia coli O6 hypothetical protein c0078 SWALL:AAN78574 (EMBL:AE016755) (78 aa) fasta scores: E(): 0.00011, 43.42% id in 76 aa; hypothetical protein 4843042 2884789 ECA4324 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052411.1 4842347 R 218491 CDS YP_052412.1 50123245 2884790 complement(4843159..4843920) 1 NC_004547.2 Similar to Yersinia pestis orf40 ypo1938 or y2373 SWALL:Q9ZC48 (EMBL:AL031866) (256 aa) fasta scores: E(): 1.7e-68, 72.22% id in 252 aa, and to Escherichia coli hypothetical transcriptional regulator ygbi or b2735 SWALL:YGBI_ECOLI (SWALL:P52598) (265 aa) fasta scores: E(): 4.4e-58, 62.3% id in 252 aa; DeoR family transcriptional regulator 4843920 2884790 ECA4325 Pectobacterium atrosepticum SCRI1043 DeoR family transcriptional regulator YP_052412.1 4843159 R 218491 CDS YP_052413.1 50123246 2884743 complement(4843917..4844132) 1 NC_004547.2 hypothetical protein 4844132 2884743 ECA4326 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052413.1 4843917 R 218491 CDS YP_052414.1 50123247 2884744 4844257..4845171 1 NC_004547.2 Similar to Escherichia coli hypothetical oxidoreductase ygbj or b2736 SWALL:YGBJ_ECOLI (SWALL:Q46888) (302 aa) fasta scores: E(): 1.3e-71, 73.75% id in 301 aa, and to Pasteurella multocida hypothetical protein Pm1366 SWALL:Q9CL76 (EMBL:AE006174) (301 aa) fasta scores: E(): 3.3e-75, 78.85% id in 298 aa; oxidoreductase 4845171 2884744 ECA4327 Pectobacterium atrosepticum SCRI1043 oxidoreductase YP_052414.1 4844257 D 218491 CDS YP_052415.1 50123248 2884745 4845168..4846442 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein ygbk or c3298 SWALL:AAN81747 (EMBL:AE016765) (420 aa) fasta scores: E(): 2.1e-101, 64.92% id in 422 aa, and to Brucella melitensis hypothetical protein Bmeii1091 SWALL:Q8YB10 (EMBL:AE009741) (436 aa) fasta scores: E(): 8.2e-93, 60.95% id in 420 aa; hypothetical protein 4846442 2884745 ECA4328 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052415.1 4845168 D 218491 CDS YP_052416.1 50123249 2884746 4846439..4847095 1 NC_004547.2 Similar to Escherichia coli hypothetical aldolase class II protein ygbl or b2738 SWALL:YGBL_ECOLI (SWALL:Q46890) (212 aa) fasta scores: E(): 3.3e-60, 74.38% id in 203 aa, and to Salmonella typhimurium, and Salmonella typhi fuculose phosphate aldolase ygbl or stm2916 or sty3041 SWALL:Q8XER3 (EMBL:AE008833) (212 aa) fasta scores: E(): 3.9e-60, 73.43% id in 207 aa; aldolase 4847095 2884746 ECA4329 Pectobacterium atrosepticum SCRI1043 aldolase YP_052416.1 4846439 D 218491 CDS YP_052417.1 50123250 2881609 4847113..4847901 1 NC_004547.2 Similar to Escherichia coli hydroxypyruvate isomerase Hyi or Gip or b0508 SWALL:HYI_ECOLI (SWALL:P30147) (258 aa) fasta scores: E(): 9.4e-35, 39.29% id in 257 aa, and to Escherichia coli O6 hypothetical protein ygbm or c3300 SWALL:Q8FEK7 (EMBL:AE016765) (258 aa) fasta scores: E(): 2.3e-66, 63.03% id in 257 aa; isomerase 4847901 2881609 ECA4330 Pectobacterium atrosepticum SCRI1043 isomerase YP_052417.1 4847113 D 218491 CDS YP_052418.1 50123251 2881585 4848093..4849451 1 NC_004547.2 member of the Gnt family of gluconate transporters; not involved in gluconate transport; unknown function; inner membrane permease YgbN 4849451 gntP 2881585 gntP Pectobacterium atrosepticum SCRI1043 inner membrane permease YgbN YP_052418.1 4848093 D 218491 CDS YP_052419.1 50123252 2881610 4849738..4851417 1 NC_004547.2 Similar to Ralstonia solanacearum methyl-accepting chemotaxis I CheD4 or rsc3412 or rs01721 SWALL:Q8XTY3 (EMBL:AL646075) (515 aa) fasta scores: E(): 1.5e-52, 43.48% id in 522 aa, and to Rahnella aquatilis methyl-accepting chemotaxis protein I SWALL:Q93ET6 (EMBL:AF338038) (554 aa) fasta scores: E(): 1.2e-51, 37.39% id in 567 aa; methyl-accepting chemotaxis protein 4851417 2881610 ECA4332 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_052419.1 4849738 D 218491 CDS YP_052420.1 50123253 2881611 4851698..4853368 1 NC_004547.2 Similar to Rahnella aquatilis methyl-accepting chemotaxis protein I SWALL:Q93ET6 (EMBL:AF338038) (554 aa) fasta scores: E(): 7.1e-54, 38.01% id in 555 aa, and to Ralstonia solanacearum methyl-accepting chemotaxis I CheD4 or rsc3412 or rs01721 SWALL:Q8XTY3 (EMBL:AL646075) (515 aa) fasta scores: E(): 1.8e-50, 42.05% id in 516 aa; methyl-accepting chemotaxis protein 4853368 2881611 ECA4333 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_052420.1 4851698 D 218491 CDS YP_052421.1 50123254 2882205 4854078..4855748 1 NC_004547.2 Similar to Escherichia coli methyl-accepting chemotaxis protein I Tsr or CheD or b4355 SWALL:MCP1_ECOLI (SWALL:P02942) (551 aa) fasta scores: E(): 8e-53, 40.14% id in 558 aa, and to Rahnella aquatilis methyl-accepting chemotaxis protein I SWALL:Q93ET6 (EMBL:AF338038) (554 aa) fasta scores: E(): 2.9e-56, 38.35% id in 558 aa; methyl-accepting chemotaxis protein 4855748 2882205 ECA4334 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_052421.1 4854078 D 218491 CDS YP_052422.1 50123255 2882206 4856341..4857987 1 NC_004547.2 Similar to Rahnella aquatilis methyl-accepting chemotaxis protein I SWALL:Q93ET6 (EMBL:AF338038) (554 aa) fasta scores: E(): 1.1e-57, 39.06% id in 558 aa, and to Ralstonia solanacearum probable methyl-accepting chemotaxis transducer transmembrane protein rsp1363 or rs04782 SWALL:Q8XQC3 (EMBL:AL646084) (543 aa) fasta scores: E(): 1.4e-55, 39.45% id in 550 aa; methyl-accepting chemotaxis protein 4857987 2882206 ECA4335 Pectobacterium atrosepticum SCRI1043 methyl-accepting chemotaxis protein YP_052422.1 4856341 D 218491 CDS YP_052423.1 50123256 2882207 complement(4858077..4859267) 1 NC_004547.2 Similar to Pyrococcus abyssi aminotransferase pyrab01920 or pab2227 SWALL:Q9V282 (EMBL:AJ248283) (410 aa) fasta scores: E(): 1.7e-51, 40% id in 395 aa, and to Myxococcus xanthus aminotransferase protein SWALL:Q8KM38 (EMBL:AJ505751) (406 aa) fasta scores: E(): 5.6e-50, 39.94% id in 388 aa; aminotransferase 4859267 2882207 ECA4336 Pectobacterium atrosepticum SCRI1043 aminotransferase YP_052423.1 4858077 R 218491 CDS YP_052424.1 50123257 2883065 complement(4859297..4859998) 1 NC_004547.2 with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit 4859998 livF 2883065 livF Pectobacterium atrosepticum SCRI1043 leucine/isoleucine/valine transporter ATP-binding subunit YP_052424.1 4859297 R 218491 CDS YP_052425.1 50123258 2883066 complement(4860004..4860774) 1 NC_004547.2 Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter ATP-binding subunit 4860774 livG 2883066 livG Pectobacterium atrosepticum SCRI1043 leucine/isoleucine/valine transporter ATP-binding subunit YP_052425.1 4860004 R 218491 CDS YP_052426.1 50123259 2883039 complement(4860771..4862045) 1 NC_004547.2 Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; leucine/isoleucine/valine transporter permease subunit 4862045 livM 2883039 livM Pectobacterium atrosepticum SCRI1043 leucine/isoleucine/valine transporter permease subunit YP_052426.1 4860771 R 218491 CDS YP_052427.1 50123260 2883067 complement(4862042..4862968) 1 NC_004547.2 LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; branched-chain amino acid transporter permease subunit LivH 4862968 livH 2883067 livH Pectobacterium atrosepticum SCRI1043 branched-chain amino acid transporter permease subunit LivH YP_052427.1 4862042 R 218491 CDS YP_052428.1 50123261 2883068 complement(4863125..4864237) 1 NC_004547.2 Similar to Escherichia coli leucine-specific binding protein precursor LivK or b3458 SWALL:LIVK_ECOLI (SWALL:P04816) (369 aa) fasta scores: E(): 9e-104, 75.27% id in 364 aa; leucine-specific binding protein 4864237 livK 2883068 livK Pectobacterium atrosepticum SCRI1043 leucine-specific binding protein YP_052428.1 4863125 R 218491 CDS YP_052429.1 50123262 2884069 4864642..4865088 1 NC_004547.2 Similar to Yersinia pestis acetyltransferase ypo3809 SWALL:Q8ZAJ2 (EMBL:AJ414159) (130 aa) fasta scores: E(): 4.7e-22, 53.48% id in 129 aa, and to Salmonella typhimurium, and Salmonella typhi acetyltransferase yhhk or stm3565 or sty4247 SWALL:Q8XFZ9 (EMBL:AE008864) (127 aa) fasta scores: E(): 1.8e-17, 48.43% id in 128 aa; acetyltransferase 4865088 2884069 ECA4342 Pectobacterium atrosepticum SCRI1043 acetyltransferase YP_052429.1 4864642 D 218491 CDS YP_052430.1 50123263 2884484 complement(4865178..4866035) 1 NC_004547.2 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; RNA polymerase factor sigma-32 4866035 rpoH 2884484 rpoH Pectobacterium atrosepticum SCRI1043 RNA polymerase factor sigma-32 YP_052430.1 4865178 R 218491 CDS YP_052431.1 50123264 2883560 complement(4866367..4867335) 1 NC_004547.2 ABC transporter, membrane protein; cell division protein FtsX 4867335 ftsX 2883560 ftsX Pectobacterium atrosepticum SCRI1043 cell division protein FtsX YP_052431.1 4866367 R 218491 CDS YP_052432.1 50123265 2884012 complement(4867325..4867996) 1 NC_004547.2 ATP-binding protein of an ATP-binding cassette transporter; when bound to FtsX, FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions; cell division protein FtsE 4867996 ftsE 2884012 ftsE Pectobacterium atrosepticum SCRI1043 cell division protein FtsE YP_052432.1 4867325 R 218491 CDS YP_052433.1 50123266 2883480 complement(4868002..4869411) 1 NC_004547.2 signal recognition protein receptor; functions in the targeting and insertion of membrane proteins; cell division protein FtsY 4869411 ftsY 2883480 ftsY Pectobacterium atrosepticum SCRI1043 cell division protein FtsY YP_052433.1 4868002 R 218491 CDS YP_052434.1 50123267 2884070 4869761..4870336 1 NC_004547.2 catalyzes the methylation of 16S rRNA at position G966; 16S rRNA m(2)G966-methyltransferase 4870336 rsmD 2884070 rsmD Pectobacterium atrosepticum SCRI1043 16S rRNA m(2)G966-methyltransferase YP_052434.1 4869761 D 218491 CDS YP_052435.1 50123268 2884071 4870363..4870641 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo3816a or y0414 SWALL:Q8ZAI5 (EMBL:AJ414159) (90 aa) fasta scores: E(): 1.2e-22, 71.59% id in 88 aa, and to Shigella flexneri orf, conserved hypothetical protein yhhl or sf3484 SWALL:AAN44943 (EMBL:AE015356) (90 aa) fasta scores: E(): 5.6e-22, 69.41% id in 85 aa; hypothetical protein 4870641 2884071 ECA4348 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052435.1 4870363 D 218491 CDS YP_052436.1 50123269 2884072 complement(4870645..4871004) 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein yhhm or c4260 SWALL:AAN82696 (EMBL:AE016768) (119 aa) fasta scores: E(): 2.6e-12, 38.65% id in 119 aa, and to Salmonella typhimurium inner membrane protein yhhm or stm3574 SWALL:Q8ZLE6 (EMBL:AE008864) (123 aa) fasta scores: E(): 3.2e-12, 39.65% id in 116 aa; hypothetical protein 4871004 2884072 ECA4349 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052436.1 4870645 R 218491 CDS YP_052437.1 50123270 2884589 complement(4871004..4871324) 1 NC_004547.2 Similar to Yersinia pestis hypothetical protein ypo3818 or y0412 SWALL:Q8ZAI3 (EMBL:AJ414159) (106 aa) fasta scores: E(): 2.2e-32, 82.07% id in 106 aa, and to Pseudomonas putida conserved hypothetical protein pp4786 SWALL:AAN70355 (EMBL:AE016792) (108 aa) fasta scores: E(): 3.6e-16, 46.15% id in 104 aa; hypothetical protein 4871324 2884589 ECA4350 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052437.1 4871004 R 218491 CDS YP_052438.1 50123271 2884590 4871506..4872135 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo3819 or y0411 SWALL:Q8ZAI2 (EMBL:AJ414159) (208 aa) fasta scores: E(): 7e-55, 66.98% id in 209 aa, and to Salmonella typhimurium, and Salmonella typhi inner membrane protein yhhn or stm3575 or sty4236 SWALL:Q8XH18 (EMBL:AE008864) (208 aa) fasta scores: E(): 5.2e-51, 63.63% id in 209 aa; hypothetical protein 4872135 2884590 ECA4351 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052438.1 4871506 D 218491 CDS YP_052439.1 50123272 2882471 4872230..4874593 1 NC_004547.2 P-type ATPase involved in the export of lead, cadmium, zinc and mercury; zinc/cadmium/mercury/lead-transporting ATPase 4874593 zntA 2882471 zntA Pectobacterium atrosepticum SCRI1043 zinc/cadmium/mercury/lead-transporting ATPase YP_052439.1 4872230 D 218491 CDS YP_052440.1 50123273 2884391 complement(4874828..4875073) 1 NC_004547.2 TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs; sulfur transfer protein SirA 4875073 sirA 2884391 sirA Pectobacterium atrosepticum SCRI1043 sulfur transfer protein SirA YP_052440.1 4874828 R 218491 CDS YP_052441.1 50123274 2884591 4875290..4875967 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo3822 SWALL:Q8ZAH9 (EMBL:AJ414159) (222 aa) fasta scores: E(): 4.1e-68, 77.56% id in 214 aa, and to Shigella flexneri orf, conserved hypothetical protein yhhq or sf3489 SWALL:AAN44948 (EMBL:AE015357) (221 aa) fasta scores: E(): 1.2e-65, 75.47% id in 212 aa; hypothetical protein 4875967 2884591 ECA4354 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052441.1 4875290 D 218491 CDS YP_052442.1 50123275 2884885 4876119..4876685 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri dcrb protein precursor DcrB or b3472 or sf3490 SWALL:DCRB_ECOLI (SWALL:P37620) (185 aa) fasta scores: E(): 2.8e-37, 61.9% id in 189 aa, and to Salmonella typhimurium, and Salmonella typhi inner membrane lipoprotein stm3580 or sty4231 SWALL:Q8XFQ6 (EMBL:AE008865) (185 aa) fasta scores: E(): 7.2e-38, 63.83% id in 188 aa; hypothetical protein 4876685 dcrB 2884885 dcrB Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052442.1 4876119 D 218491 CDS YP_052443.1 50123276 2885767 4877184..4879178 1 NC_004547.2 No significant database matches. Strongly similar to ECA2106 (88.084% id) and ECA4431 (87.783% id) and; hypothetical protein 4879178 2885767 ECA4356 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052443.1 4877184 D 218491 CDS YP_052444.1 50123277 2885768 4879178..4879885 1 NC_004547.2 Similar to Shewanella oneidensis hypothetical protein soa0070 SWALL:AAN53005 (EMBL:AE015914) (234 aa) fasta scores: E(): 8.6e-29, 41.35% id in 237 aa, and to Shewanella oneidensis hypothetical protein soa0150 SWALL:AAN53066 (EMBL:AE015921) (221 aa) fasta scores: E(): 3.6e-27, 42.92% id in 226 aa. Also similar to ECA2107 (77.637% id), ECA2108 (75.949% id), ECA2109 (87.234% id) and ECA4430 (75.527% id).; lipoprotein 4879885 2885768 ECA4357 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_052444.1 4879178 D 218491 CDS YP_052445.1 50123278 2885769 complement(4880005..4881213) 1 NC_004547.2 Similar to Escherichia coli hypothetical protein yhhs or b3473 SWALL:YHHS_ECOLI (SWALL:P37621) (419 aa) fasta scores: E(): 3.3e-102, 70.88% id in 395 aa, and to Pseudomonas putida membrane protein, pp4492 SWALL:AAN70067 (EMBL:AE016790) (400 aa) fasta scores: E(): 1.4e-70, 52.68% id in 391 aa; major facilitator superfamily transporter 4881213 2885769 ECA4358 Pectobacterium atrosepticum SCRI1043 major facilitator superfamily transporter YP_052445.1 4880005 R 218491 CDS YP_052446.1 50123279 2885770 4881331..4882347 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo3985 or y3844 SWALL:Q8ZA35 (EMBL:AJ414160) (360 aa) fasta scores: E(): 1.1e-91, 72.37% id in 333 aa, and to Erwinia chrysanthemi hypothetical 36.0 kDa protein in kdgk 5'region SWALL:YHJD_ERWCH (SWALL:P45417) (328 aa) fasta scores: E(): 2.8e-88, 70.65% id in 334 aa; hypothetical protein 4882347 2885770 ECA4359 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052446.1 4881331 D 218491 CDS YP_052447.1 50123280 2885181 4882515..4883447 1 NC_004547.2 Similar to Erwinia chrysanthemi 2-dehydro-3-deoxygluconokinase KdgK SWALL:KDGK_ERWCH (SWALL:P45416) (310 aa) fasta scores: E(): 1.4e-100, 82.25% id in 310 aa; 2-dehydro-3-deoxygluconokinase 4883447 kdgK 2885181 kdgK Pectobacterium atrosepticum SCRI1043 2-dehydro-3-deoxygluconokinase YP_052447.1 4882515 D 218491 CDS YP_052448.1 50123281 2884888 complement(4883526..4885022) 1 NC_004547.2 Similar to Yersinia pestis insulinase family protease ypo3991 or y3837 SWALL:AAM87382 (EMBL:AJ414160) (499 aa) fasta scores: E(): 1.5e-117, 63.56% id in 494 aa, and to Escherichia coli protein yhjj precursor yhjj or b3527 SWALL:YHJJ_ECOLI (SWALL:P37648) (498 aa) fasta scores: E(): 1.7e-106, 55.51% id in 499 aa; peptidase 4885022 2884888 ECA4361 Pectobacterium atrosepticum SCRI1043 peptidase YP_052448.1 4883526 R 218491 CDS YP_052449.1 50123282 2884886 complement(4885383..4886675) 1 NC_004547.2 involved in the transport of C4-dicarboxylates across the membrane; C4-dicarboxylate transporter DctA 4886675 dctA 2884886 dctA Pectobacterium atrosepticum SCRI1043 C4-dicarboxylate transporter DctA YP_052449.1 4885383 R 218491 CDS YP_052450.1 50123283 2884889 complement(4886993..4888174) 1 NC_004547.2 Similar to Yersinia pestis membrane protein ypo3996 SWALL:Q8ZA24 (EMBL:AJ414160) (671 aa) fasta scores: E(): 4.1e-57, 47.29% id in 406 aa, and to Escherichia coli O6 protein yhjk yhjk or c4341 SWALL:AAN82777 (EMBL:AE016768) (662 aa) fasta scores: E(): 3.8e-47, 41.35% id in 399 aa; hypothetical protein 4888174 2884889 ECA4363 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052450.1 4886993 R 218491 CDS YP_052451.1 50123284 2884890 complement(4888643..4890289) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi inner membrane protein yhju or stm3624 or sty4176 or bcsG SWALL:Q8XFY5 (EMBL:AE008867) (559 aa) fasta scores: E(): 5.6e-96, 62.61% id in 559 aa, and to Escherichia coli O6 hypothetical protein yhju or c4350 SWALL:AAN82786 (EMBL:AE016768) (559 aa) fasta scores: E(): 1.3e-92, 61.41% id in 552 aa; hypothetical protein 4890289 2884890 ECA4364 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052451.1 4888643 R 218491 CDS YP_052452.1 50123285 2884891 complement(4890291..4890512) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi inner membrane protein yhjt or stm3623 or sty4177 or bcsF SWALL:Q8XGR3 (EMBL:AE008867) (63 aa) fasta scores: E(): 0.0021, 40% id in 60 aa, and to Shigella flexneri orf, conserved hypothetical protein yhjt or sf3569 SWALL:AAN45020 (EMBL:AE015365) (63 aa) fasta scores: E(): 0.0065, 34.42% id in 61 aa; hypothetical protein 4890512 2884891 ECA4365 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052452.1 4890291 R 218491 CDS YP_052453.1 50123286 2884545 complement(4890509..4891822) 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein Sty4178 SWALL:Q8Z293 (EMBL:AL627281) (523 aa) fasta scores: E(): 3.7e-67, 44.09% id in 381 aa, and to Escherichia coli hypothetical protein yhjs or b3536 SWALL:YHJS_ECOLI (SWALL:P37657) (523 aa) fasta scores: E(): 1.6e-66, 44.97% id in 378 aa; hypothetical protein 4891822 2884545 ECA4366 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052453.1 4890509 R 218491 CDS YP_052454.1 50123287 2884546 complement(4891859..4892083) 1 NC_004547.2 Similar to the N-terminal regions of Salmonella typhimurium cytoplasmic protein yhjs or stm3622 or bcsE SWALL:Q8ZLB5 (EMBL:AE008867) (523 aa) fasta scores: E(): 2.4e-06, 53.84% id in 52 aa, and to Escherichia coli hypothetical protein yhjs or b3536 SWALL:YHJS_ECOLI (SWALL:P37657) (523 aa) fasta scores: E(): 9.7e-05, 47.05% id in 51 aa; hypothetical protein 4892083 2884546 ECA4367 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052454.1 4891859 R 218491 CDS YP_052455.1 50123288 2884547 4892409..4892618 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi yhjr protein yhjr or stm3621 or sty4179 SWALL:Q93IN4 (EMBL:AJ315770) (67 aa) fasta scores: E(): 4.9e-06, 43.86% id in 57 aa, and to Escherichia coli hypothetical protein yhjr or b3535 SWALL:YHJR_ECOLI (SWALL:P37656) (62 aa) fasta scores: E(): 0.00042, 46.34% id in 41 aa; hypothetical protein 4892618 2884547 ECA4368 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052455.1 4892409 D 218491 CDS YP_052456.1 50123289 2885425 4892621..4893358 1 NC_004547.2 Similar to Salmonella typhi hypothetical protein yhjq or sty4180 SWALL:Q8Z292 (EMBL:AL627281) (250 aa) fasta scores: E(): 7.1e-50, 51.22% id in 246 aa, and to Escherichia coli O6 hypothetical protein yhjq or c4346 SWALL:AAN82782 (EMBL:AE016768) (250 aa) fasta scores: E(): 4.3e-49, 51.04% id in 239 aa; hypothetical protein 4893358 2885425 ECA4369 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052456.1 4892621 D 218491 CDS YP_052457.1 50123290 2882021 4896128..4898422 1 NC_004547.2 binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); cellulose synthase regulator protein 4898422 bcsB 2882021 bcsB Pectobacterium atrosepticum SCRI1043 cellulose synthase regulator protein YP_052457.1 4896128 D 218491 CDS YP_052458.1 50123291 2882023 4898429..4899544 1 NC_004547.2 catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans; endo-1,4-D-glucanase 4899544 bcsZ 2882023 bcsZ Pectobacterium atrosepticum SCRI1043 endo-1,4-D-glucanase YP_052458.1 4898429 D 218491 CDS YP_052459.2 161501869 2882022 4900537..4904106 1 NC_004547.2 cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA; cellulose synthase subunit BcsC 4904106 bcsC 2882022 bcsC Pectobacterium atrosepticum SCRI1043 cellulose synthase subunit BcsC YP_052459.2 4900537 D 218491 CDS YP_052460.1 50123293 2885426 complement(4904113..4905171) 1 NC_004547.2 Similar to Pseudomonas putida transcriptional regulator, AraC family pp4508 SWALL:AAN70082 (EMBL:AE016790) (353 aa) fasta scores: E(): 2e-22, 29.16% id in 336 aa, and to Pseudomonas alcaligenes virulence regulating homolog SWALL:Q9ZFW7 (EMBL:AF092918) (346 aa) fasta scores: E(): 1.1e-21, 28.24% id in 347 aa; AraC family transcriptional regulator 4905171 2885426 ECA4375 Pectobacterium atrosepticum SCRI1043 AraC family transcriptional regulator YP_052460.1 4904113 R 218491 CDS YP_052461.1 50123294 2885427 complement(4905344..4906351) 1 NC_004547.2 Similar to Rhizobium loti hypothetical protein Mlr6716 SWALL:Q988J5 (EMBL:AP003009) (335 aa) fasta scores: E(): 1.8e-46, 40.72% id in 329 aa, and to Agrobacterium tumefaciens hypothetical protein atu5252 or agr_pat_360 SWALL:Q8UK71 (EMBL:AE008947) (355 aa) fasta scores: E(): 9.2e-44, 41.52% id in 301 aa; hypothetical protein 4906351 2885427 ECA4376 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052461.1 4905344 R 218491 CDS YP_052462.1 50123295 2885428 4906610..4907971 1 NC_004547.2 Similar to Xanthomonas campestris ethanolamin permease EutP or xcc2259 SWALL:Q8P8I2 (EMBL:AE012333) (454 aa) fasta scores: E(): 8.6e-135, 76.99% id in 439 aa, and to Burkholderia pseudomallei permease lpw119 SWALL:Q93TX8 (EMBL:AF312940) (469 aa) fasta scores: E(): 9.3e-122, 71.81% id in 440 aa; ethanolamin permease 4907971 2885428 ECA4377 Pectobacterium atrosepticum SCRI1043 ethanolamin permease YP_052462.1 4906610 D 218491 CDS YP_052463.1 50123296 2885495 4908005..4909348 1 NC_004547.2 Similar to Rhizobium meliloti aminotransferase ra0973 or sma1761 SWALL:Q92YB1 (EMBL:AE007283) (438 aa) fasta scores: E(): 1.2e-86, 51.61% id in 434 aa, and to Agrobacterium tumefaciens pyridoxal phosphate aminotransferase atu5251 or agr_pat_358 SWALL:Q8UK72 (EMBL:AE008947) (464 aa) fasta scores: E(): 6.4e-78, 47.85% id in 443 aa; aminotransferase 4909348 2885495 ECA4378 Pectobacterium atrosepticum SCRI1043 aminotransferase YP_052463.1 4908005 D 218491 CDS YP_052464.1 50123297 2882455 complement(4909444..4911222) 1 NC_004547.2 Similar to Escherichia coli gamma-glutamyltranspeptidase precursor Ggt or b3447 SWALL:GGT_ECOLI (SWALL:P18956) (580 aa) fasta scores: E(): 2.3e-93, 46.93% id in 571 aa, and to Pseudomonas sp. gamma-glutamyltranspeptidase precursor Ggt SWALL:GGT_PSESP (SWALL:P36267) (575 aa) fasta scores: E(): 1.2e-114, 56.17% id in 591 aa; gamma-glutamyltranspeptidase 4911222 ggt 2882455 ggt Pectobacterium atrosepticum SCRI1043 gamma-glutamyltranspeptidase YP_052464.1 4909444 R 218491 CDS YP_052465.1 50123298 2885496 complement(4911487..4912836) 1 NC_004547.2 Similar to Escherichia coli hypothetical transport protein yjjl or b4356 SWALL:YJJL_ECOLI (SWALL:P39398) (453 aa) fasta scores: E(): 4.2e-172, 91.17% id in 453 aa, and to Bacillus subtilis hexuronate transporter ExuT SWALL:EXUT_BACSU (SWALL:O34456) (422 aa) fasta scores: E(): 1e-42, 30.56% id in 409 aa; sugar transporter 4912836 2885496 ECA4380 Pectobacterium atrosepticum SCRI1043 sugar transporter YP_052465.1 4911487 R 218491 CDS YP_052466.1 50123299 2885497 complement(4913050..4913964) 1 NC_004547.2 Similar to Shigella flexneri yjjm gene product yjjm or sf4388 SWALL:AAN45804 (EMBL:AE015445) (304 aa) fasta scores: E(): 2.8e-109, 88.81% id in 304 aa, and to Escherichia coli hypothetical protein yjjm or b4357 SWALL:YJJM_ECOLI (SWALL:P39399) (268 aa) fasta scores: E(): 6.2e-95, 88.06% id in 268 aa; DNA-binding protein 4913964 2885497 ECA4381 Pectobacterium atrosepticum SCRI1043 DNA-binding protein YP_052466.1 4913050 R 218491 CDS YP_052467.1 50123300 2883892 4914105..4915127 1 NC_004547.2 Similar to Escherichia coli hypothetical zinc-type alcohol dehydrogenase-like protein yjjn or b4358 SWALL:YJJN_ECOLI (SWALL:P39400) (337 aa) fasta scores: E(): 2.4e-105, 85.16% id in 337 aa, and to Salmonella typhimurium zinc-binding dehydrogenase stm3082 SWALL:Q8ZM59 (EMBL:AE008841) (338 aa) fasta scores: E(): 6.5e-63, 53.84% id in 338 aa; zinc-binding dehydrogenase 4915127 2883892 ECA4382 Pectobacterium atrosepticum SCRI1043 zinc-binding dehydrogenase YP_052467.1 4914105 D 218491 CDS YP_052468.1 50123301 2882733 4915141..4916586 1 NC_004547.2 catalyzes the formation of D-tagaturonate from D-altronate; altronate oxidoreductase 4916586 uxaB2 2882733 uxaB2 Pectobacterium atrosepticum SCRI1043 altronate oxidoreductase YP_052468.1 4915141 D 218491 CDS YP_052469.1 50123302 2882100 complement(4916662..4917573) 1 NC_004547.2 Similar to Escherichia coli probable amino acid metabolite efflux pump EamA or b1533 SWALL:EAMA_ECOLI (SWALL:P31125) (299 aa) fasta scores: E(): 9.6e-64, 60.66% id in 300 aa, and to Salmonella typhimurium probable amino acid metabolite efflux pump EamA or stm1517 SWALL:EAMA_SALTY (SWALL:Q56072) (299 aa) fasta scores: E(): 1.6e-65, 63.69% id in 303 aa; amino acid metabolite efflux pump 4917573 eamA 2882100 eamA Pectobacterium atrosepticum SCRI1043 amino acid metabolite efflux pump YP_052469.1 4916662 R 218491 CDS YP_052470.1 50123303 2883893 complement(4917730..4918947) 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c4013 SWALL:AAN82453 (EMBL:AE016767) (348 aa) fasta scores: E(): 4.5e-22, 30.65% id in 323 aa; hypothetical protein 4918947 2883893 ECA4385 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052470.1 4917730 R 218491 CDS YP_052471.1 50123304 2882170 4919331..4920581 1 NC_004547.2 transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis; valine--pyruvate transaminase 4920581 avtA 2882170 avtA Pectobacterium atrosepticum SCRI1043 valine--pyruvate transaminase YP_052471.1 4919331 D 218491 CDS YP_052472.1 50123305 2882020 complement(4920702..4922174) 1 NC_004547.2 Similar to Erwinia chrysanthemi 6-phospho-beta-glucosidase ArbB SWALL:ARBB_ERWCH (SWALL:P26206) (465 aa) fasta scores: E(): 1.1e-93, 53.94% id in 482 aa, and to Bacillus subtilis beta-glucosidase BglH or n17D SWALL:BGL1_BACSU (SWALL:P40740) (469 aa) fasta scores: E(): 5e-106, 57.88% id in 482 aa. Also similar to ECA1871 (ArbB) (54.149% id), ECA0662 (51.837% id), ECA4432 (49.899% id), ECA2166 (49.689% id), ECA4407 (31.440% id), ECA0859 (38.277% id), ECA1451 (40.600% id) and to ECA3646 (28.630% id); beta-glucosidase 4922174 bglH 2882020 bglH Pectobacterium atrosepticum SCRI1043 beta-glucosidase YP_052472.1 4920702 R 218491 CDS YP_052473.1 50123306 2883894 complement(4922195..4924099) 1 NC_004547.2 Similar to Erwinia chrysanthemi PTS system, beta-glucoside-specific IIabc component ArbF SWALL:PTBA_ERWCH (SWALL:P26207) (631 aa) fasta scores: E(): 6.6e-81, 37.57% id in 636 aa, and to Escherichia coli PTS system, beta-glucoside-specific IIabc component BglF or BglC or BglS or b3722 SWALL:PTBA_ECOLI (SWALL:P08722) (625 aa) fasta scores: E(): 9.4e-80, 38.6% id in 632 aa; PTS system transporter subunit IIABC 4924099 2883894 ECA4388 Pectobacterium atrosepticum SCRI1043 PTS system transporter subunit IIABC YP_052473.1 4922195 R 218491 CDS YP_052474.1 50123307 2883895 complement(4924231..4925058) 1 NC_004547.2 Similar to Erwinia chrysanthemi beta-glucoside operon antiterminator ArbG SWALL:ARBG_ERWCH (SWALL:P26211) (283 aa) fasta scores: E(): 2.8e-45, 45.98% id in 274 aa, and to Bacillus subtilis transcription antiterminator LicT or n15A SWALL:LICT_BACSU (SWALL:P39805) (277 aa) fasta scores: E(): 2e-48, 46.54% id in 275 aa, and to Escherichia coli cryptic beta-glucoside bgl operon antiterminator BglG or BglC or b3723 SWALL:BGLG_ECOLI (SWALL:P11989) (278 aa) fasta scores: E(): 1.7e-39, 39.63% id in 275 aa; beta-glucoside operon antiterminator 4925058 2883895 ECA4389 Pectobacterium atrosepticum SCRI1043 beta-glucoside operon antiterminator YP_052474.1 4924231 R 218491 CDS YP_052475.1 50123308 2882215 complement(4925484..4926494) 1 NC_004547.2 Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; dipeptide transporter ATP-binding subunit 4926494 dppF 2882215 dppF Pectobacterium atrosepticum SCRI1043 dipeptide transporter ATP-binding subunit YP_052475.1 4925484 R 218491 CDS YP_052476.1 50123309 2882214 complement(4926491..4927471) 1 NC_004547.2 DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; dipeptide transporter ATP-binding subunit 4927471 dppD 2882214 dppD Pectobacterium atrosepticum SCRI1043 dipeptide transporter ATP-binding subunit YP_052476.1 4926491 R 218491 CDS YP_052477.1 50123310 2882404 complement(4927485..4928387) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 dipeptide transport system permease protein DppC or b3542 or c4357 or z4959 or ecs4422 SWALL:DPPC_ECOLI (SWALL:P37315) (300 aa) fasta scores: E(): 6e-98, 86.33% id in 300 aa; dipeptide transporter 4928387 dppC 2882404 dppC Pectobacterium atrosepticum SCRI1043 dipeptide transporter YP_052477.1 4927485 R 218491 CDS YP_052478.1 50123311 2882403 complement(4928401..4929420) 1 NC_004547.2 transports peptides consisting of two or three amino acids; dipeptide transporter permease DppB 4929420 dppB 2882403 dppB Pectobacterium atrosepticum SCRI1043 dipeptide transporter permease DppB YP_052478.1 4928401 R 218491 CDS YP_052479.1 50123312 2882402 complement(4929655..4931262) 1 NC_004547.2 Similar to Escherichia coli periplasmic dipeptide transport protein precursor DppA or b3544 SWALL:DPPA_ECOLI (SWALL:P23847) (535 aa) fasta scores: E(): 6.9e-186, 81.68% id in 535 aa; periplasmic dipeptide transport protein 4931262 dppA 2882402 dppA Pectobacterium atrosepticum SCRI1043 periplasmic dipeptide transport protein YP_052479.1 4929655 R 218491 CDS YP_052480.1 50123313 2881496 4932696..4934039 1 NC_004547.2 Similar to Bacillus subtilis Na(+)-malate symporter MaeN SWALL:MAEN_BACSU (SWALL:O05256) (448 aa) fasta scores: E(): 2.5e-95, 58.93% id in 414 aa; Na(+)-malate symporter 4934039 maeN 2881496 maeN Pectobacterium atrosepticum SCRI1043 Na(+)-malate symporter YP_052480.1 4932696 D 218491 CDS YP_052481.1 50123314 2883818 complement(4934120..4934395) 1 NC_004547.2 hypothetical protein 4934395 2883818 ECA4396 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052481.1 4934120 R 218491 CDS YP_052482.1 50123315 2883819 complement(4934379..4935272) 1 NC_004547.2 hypothetical protein 4935272 2883819 ECA4397 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052482.1 4934379 R 218491 CDS YP_052483.1 50123316 2884845 complement(4935389..4936111) 1 NC_004547.2 response regulator in two-component regulatory system with DcuS; phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration; DNA-binding transcriptional activator DcuR 4936111 dcuR 2884845 dcuR Pectobacterium atrosepticum SCRI1043 DNA-binding transcriptional activator DcuR YP_052483.1 4935389 R 218491 CDS YP_052484.1 50123317 2884753 complement(4936104..4937762) 1 NC_004547.2 C4-dicarboxylate-sensing histidine kinase; part of two-component regulatory system with DcuR; regulates anaerobic fumarate respiration; sensory histidine kinase DcuS 4937762 dcuS 2884753 dcuS Pectobacterium atrosepticum SCRI1043 sensory histidine kinase DcuS YP_052484.1 4936104 R 218491 CDS YP_052485.1 50123318 2883820 complement(4937906..4939318) 1 NC_004547.2 Similar to Spinacia oleracea 2-oxoglutarate/malate translocator, chloroplast precursor SodiT1 SWALL:SOT1_SPIOL (SWALL:Q41364) (569 aa) fasta scores: E(): 3e-87, 45.7% id in 466 aa, and to Vibrio vulnificus di-and tricarboxylate transporter vv20102 SWALL:AAO07076 (EMBL:AE016808) (467 aa) fasta scores: E(): 6e-127, 65.23% id in 466 aa; sodium:sulfate symporter 4939318 2883820 ECA4400 Pectobacterium atrosepticum SCRI1043 sodium:sulfate symporter YP_052485.1 4937906 R 218491 CDS YP_052486.1 50123319 2883766 complement(4939844..4941502) 1 NC_004547.2 Similar to Yersinia pestis hypothetical membrane protein ypo4083 or y4100 SWALL:Y4I3_YERPE (SWALL:Q8Z9V7) (552 aa) fasta scores: E(): 2.4e-166, 80.07% id in 552 aa, and to Salmonella typhimurium hypothetical membrane protein yide or stm3807 SWALL:YIDE_SALTY (SWALL:Q8ZL04) (553 aa) fasta scores: E(): 5.2e-158, 76.5% id in 549 aa; hypothetical protein 4941502 2883766 ECA4401 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052486.1 4939844 R 218491 CDS YP_052487.1 50123320 2882903 complement(4941693..4942145) 1 NC_004547.2 16 kDa heat shock protein B; associates with aggregated proteins, together with ibpA, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; ATP-independent; heat shock chaperone IbpB 4942145 ibpB 2882903 ibpB Pectobacterium atrosepticum SCRI1043 heat shock chaperone IbpB YP_052487.1 4941693 R 218491 CDS YP_052488.1 50123321 2882902 complement(4942274..4942687) 1 NC_004547.2 with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; heat shock protein IbpA 4942687 ibpA 2882902 ibpA Pectobacterium atrosepticum SCRI1043 heat shock protein IbpA YP_052488.1 4942274 R 218491 CDS YP_052489.1 50123322 2883767 4943076..4943450 1 NC_004547.2 Similar to Yersinia pestis lipoprotein ypo4086 or y4103 SWALL:Q8Z9V4 (EMBL:AJ414160) (112 aa) fasta scores: E(): 2.8e-19, 55.35% id in 112 aa, and to Escherichia coli, and Shigella flexneri hypothetical protein yidq precursor yidq or b3688 or sf3775 SWALL:YIDQ_ECOLI (SWALL:P31454) (110 aa) fasta scores: E(): 1.2e-15, 46.55% id in 116 aa; hypothetical protein 4943450 2883767 ECA4404 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052489.1 4943076 D 218491 CDS YP_052490.1 50123323 2883768 complement(4943487..4944773) 1 NC_004547.2 Similar to Salmonella typhi ATP/GTP-binding protein sty3967 SWALL:Q8Z2M0 (EMBL:AL627280) (408 aa) fasta scores: E(): 1.1e-44, 61.39% id in 417 aa, and to Escherichia coli hypothetical protein yidr or b3689 SWALL:YIDR_ECOLI (SWALL:P31455) (416 aa) fasta scores: E(): 7.8e-40, 61.08% id in 406 aa; hypothetical protein 4944773 2883768 ECA4405 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052490.1 4943487 R 218491 CDS YP_052491.1 50123324 2883769 4945009..4945266 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo2521 or y1667 SWALL:Q8ZDN9 (EMBL:AJ414152) (86 aa) fasta scores: E(): 6.2e-12, 55.29% id in 85 aa, and to Salmonella typhimurium, and Salmonella typhi periplasmic protein ybij or stm0823 or sty0860 SWALL:Q8XFN7 (EMBL:AE008734) (86 aa) fasta scores: E(): 1.7e-11, 56.47% id in 85 aa; hypothetical protein 4945266 2883769 ECA4406 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052491.1 4945009 D 218491 CDS YP_052492.1 50123325 2883741 complement(4945446..4946843) 1 NC_004547.2 Similar to Salmonella typhimurium glycosyl hydrolase family stm3775 SWALL:Q8ZL24 (EMBL:AE008876) (460 aa) fasta scores: E(): 1.6e-161, 78.99% id in 457 aa, and to Bacillus subtilis hypothetical protein YdhP SWALL:O05508 (EMBL:D88802) (465 aa) fasta scores: E(): 8.1e-132, 64.05% id in 459 aa; glycosyl hydrolase 4946843 2883741 ECA4407 Pectobacterium atrosepticum SCRI1043 glycosyl hydrolase YP_052492.1 4945446 R 218491 CDS YP_052493.1 50123326 2883742 complement(4946869..4948191) 1 NC_004547.2 Similar to Lactobacillus casei PTS system, lactose-specific IIbc component LacE SWALL:PTLB_LACCA (SWALL:P24400) (577 aa) fasta scores: E(): 1.4e-42, 31.78% id in 431 aa, and to Vibrio vulnificus phosphotransferase system cellobiose-specific component IIc vv11483 SWALL:AAO09922 (EMBL:AE016801) (443 aa) fasta scores: E(): 5.4e-96, 49.88% id in 437 aa; PTS system transporter subunit EIIC 4948191 2883742 ECA4408 Pectobacterium atrosepticum SCRI1043 PTS system transporter subunit EIIC YP_052493.1 4946869 R 218491 CDS YP_052494.1 50123327 2883743 complement(4948188..4948499) 1 NC_004547.2 Similar to Bacillus stearothermophilus PTS system, cellobiose-specific IIb component celA SWALL:PTCB_BACST (SWALL:Q45399) (100 aa) fasta scores: E(): 9.2e-14, 50.52% id in 95 aa; PTS system cellobiose-specific transporter subunit IIB 4948499 2883743 ECA4409 Pectobacterium atrosepticum SCRI1043 PTS system cellobiose-specific transporter subunit IIB YP_052494.1 4948188 R 218491 CDS YP_052495.1 50123328 2884345 4948910..4949932 1 NC_004547.2 part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic subunit SsuB the ATP-binding subunit and SsuC the permease; alkanesulfonate transporter substrate-binding subunit 4949932 ssuA 2884345 ssuA Pectobacterium atrosepticum SCRI1043 alkanesulfonate transporter substrate-binding subunit YP_052495.1 4948910 D 218491 CDS YP_052496.1 50123329 2884341 4949991..4951133 1 NC_004547.2 catalyzes the release of sulfite from alkanesulfonates; alkanesulfonate monooxygenase 4951133 ssuD 2884341 ssuD Pectobacterium atrosepticum SCRI1043 alkanesulfonate monooxygenase YP_052496.1 4949991 D 218491 CDS YP_052497.1 50123330 2884347 4951144..4951938 1 NC_004547.2 Similar to Escherichia coli aliphatic sulfonates transport permease protein SsuC or b0934 SWALL:SSUC_ECOLI (SWALL:P75851) (263 aa) fasta scores: E(): 2.5e-77, 78.59% id in 257 aa; aliphatic sulfonates transport permease 4951938 ssuC 2884347 ssuC Pectobacterium atrosepticum SCRI1043 aliphatic sulfonates transport permease YP_052497.1 4951144 D 218491 CDS YP_052498.1 50123331 2884346 4951935..4952735 1 NC_004547.2 part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease; aliphatic sulfonates transporter ATP-binding subunit 4952735 ssuB 2884346 ssuB Pectobacterium atrosepticum SCRI1043 aliphatic sulfonates transporter ATP-binding subunit YP_052498.1 4951935 D 218491 CDS YP_052499.1 50123332 2883624 4952908..4953165 1 NC_004547.2 Similar to Yersinia pestis exported protein ypo2521 or y1667 SWALL:Q8ZDN9 (EMBL:AJ414152) (86 aa) fasta scores: E(): 3.5e-15, 66.27% id in 86 aa, and to Salmonella typhimurium, and Salmonella typhi periplasmic protein ybij or stm0823 or sty0860 SWALL:Q8XFN7 (EMBL:AE008734) (86 aa) fasta scores: E(): 8.1e-14, 59.3% id in 86 aa; hypothetical protein 4953165 2883624 ECA4414 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052499.1 4952908 D 218491 CDS YP_052500.1 50123333 2883363 complement(4953274..4954563) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 D-galactonate transporter DgoT or b3691 or c4612 SWALL:DGOT_ECOLI (SWALL:P31457) (430 aa) fasta scores: E(): 2.1e-144, 83.72% id in 430 aa, and to Escherichia coli probable glucarate transporter GudP or b2789 SWALL:GUDP_ECOLI (SWALL:Q46916) (450 aa) fasta scores: E(): 1.5e-68, 41.62% id in 430 aa; D-galactonate transporter 4954563 dgoT 2883363 dgoT Pectobacterium atrosepticum SCRI1043 D-galactonate transporter YP_052500.1 4953274 R 218491 CDS YP_052501.1 50123334 2883563 complement(4955039..4956187) 1 NC_004547.2 Similar to the C-terminal region of Escherichia coli DgoA protein [includes: 2-dehydro-3-deoxyphosphogalactonate aldolase; galactonate dehydratase] DgoA or DgoD or b3692 SWALL:DGOA_ECOLI (SWALL:P31458) (587 aa) fasta scores: E(): 1.2e-130, 85.34% id in 382 aa, and similar, over the entire length, to Salmonella typhimurium galactonate dehydratase in bifunctional: 2-oxo-3-deoxygalactonate 6-phosphate aldolase and galactonate dehydratase DgoA or stm3828 SWALL:Q8ZKZ1 (EMBL:AE008878) (382 aa) fasta scores: E(): 2.2e-130, 85.07% id in 382 aa; galactonate dehydratase 4956187 dgoA1 2883563 dgoA1 Pectobacterium atrosepticum SCRI1043 galactonate dehydratase YP_052501.1 4955039 R 218491 CDS YP_052502.1 50123335 2883393 complement(4956184..4956801) 1 NC_004547.2 catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 4956801 dgoA2 2883393 dgoA2 Pectobacterium atrosepticum SCRI1043 2-dehydro-3-deoxy-6-phosphogalactonate aldolase YP_052502.1 4956184 R 218491 CDS YP_052503.1 50123336 2883394 complement(4956785..4957681) 1 NC_004547.2 Similar to Escherichia coli 2-dehydro-3-deoxygalactonokinase DgoK or b3693 SWALL:DGOK_ECOLI (SWALL:P31459) (292 aa) fasta scores: E(): 3.5e-61, 54.76% id in 294 aa; 2-dehydro-3-deoxygalactonokinase 4957681 dgoK 2883394 dgoK Pectobacterium atrosepticum SCRI1043 2-dehydro-3-deoxygalactonokinase YP_052503.1 4956785 R 218491 CDS YP_052504.1 50123337 2883395 complement(4957678..4958376) 1 NC_004547.2 Similar to Escherichia coli galactonate operon transcriptional repressor DgoR or b3694/b3695 SWALL:DGOR_ECOLI (SWALL:P31460) (229 aa) fasta scores: E(): 6.9e-70, 80.61% id in 227 aa; GntR-family transcriptional regulator 4958376 dgoR 2883395 dgoR Pectobacterium atrosepticum SCRI1043 GntR-family transcriptional regulator YP_052504.1 4957678 R 218491 CDS YP_052505.1 50123338 2883625 complement(4958773..4960608) 1 NC_004547.2 Similar to Rhizobium loti ABC transporter ATP-binding protein mlr6287 SWALL:Q989T5 (EMBL:AP003008) (616 aa) fasta scores: E(): 1e-141, 65.67% id in 603 aa, and to Agrobacterium tumefaciens ABC transporter, nucleotide binding/ATPase protein MoaD or atu4723 or agr_l_318 SWALL:Q8U6T3 (EMBL:AE009400) (642 aa) fasta scores: E(): 9.6e-143, 64.59% id in 610 aa; ABC transporter ATP-binding protein 4960608 2883625 ECA4420 Pectobacterium atrosepticum SCRI1043 ABC transporter ATP-binding protein YP_052505.1 4958773 R 218491 CDS YP_052506.1 50123339 2883626 complement(4960612..4961520) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 dipeptide transport system permease protein DppC or b3542 or c4357 or z4959 or ecs4422 SWALL:DPPC_ECOLI (SWALL:P37315) (300 aa) fasta scores: E(): 2.7e-36, 40.14% id in 274 aa, and to Ralstonia solanacearum probable dipeptide transmembrane ABC transporter protein DppC2 or rsc1883 or rs03443 SWALL:Q8XY80 (EMBL:AL646067) (311 aa) fasta scores: E(): 4.2e-68, 61.75% id in 285 aa; ABC transporter permease 4961520 2883626 ECA4421 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_052506.1 4960612 R 218491 CDS YP_052507.1 50123340 2883627 complement(4961517..4962494) 1 NC_004547.2 Similar to Bacillus subtilis oligopeptide transport system permease protein AppB SWALL:APPB_BACSU (SWALL:P42062) (317 aa) fasta scores: E(): 2.2e-41, 37.46% id in 323 aa, and to Ralstonia solanacearum probable dipeptide transmembrane ABC transporter protein DppB2 or rsc1882 or rs03442 SWALL:Q8XY81 (EMBL:AL646067) (328 aa) fasta scores: E(): 4.7e-78, 61.12% id in 319 aa; ABC transporter permease 4962494 2883627 ECA4422 Pectobacterium atrosepticum SCRI1043 ABC transporter permease YP_052507.1 4961517 R 218491 CDS YP_052508.1 50123341 2883443 complement(4962494..4963465) 1 NC_004547.2 Similar to Rhizobium meliloti nucleoside hydrolase protein r00415 or smc01105 SWALL:Q92SI0 (EMBL:AL591783) (314 aa) fasta scores: E(): 1.3e-49, 47.74% id in 310 aa, and to Agrobacterium tumefaciens inosine-uridine preferring nucleoside hydrolase IunH or atu0374 or agr_c_654 SWALL:Q8UIC3 (EMBL:AE009008) (333 aa) fasta scores: E(): 2.5e-48, 44.37% id in 311 aa; nucleoside hydrolase 4963465 2883443 ECA4423 Pectobacterium atrosepticum SCRI1043 nucleoside hydrolase YP_052508.1 4962494 R 218491 CDS YP_052509.1 50123342 2883444 complement(4963467..4964420) 1 NC_004547.2 Similar to Rhizobium meliloti nucleoside hydrolase protein r00415 or smc01105 SWALL:Q92SI0 (EMBL:AL591783) (314 aa) fasta scores: E(): 6.6e-47, 46.32% id in 313 aa, and to Agrobacterium tumefaciens inosine-uridine preferring nucleoside hydrolase iunh or atu0374 or agr_c_654 SWALL:Q8UIC3 (EMBL:AE009008) (333 aa) fasta scores: E(): 4.3e-50, 49.83% id in 309 aa; nucleoside hydrolase protein 4964420 2883444 ECA4424 Pectobacterium atrosepticum SCRI1043 nucleoside hydrolase protein YP_052509.1 4963467 R 218491 CDS YP_052510.1 50123343 2883445 complement(4964540..4965424) 1 NC_004547.2 Similar to Bradyrhizobium japonicum Bll7272 protein bll7272 SWALL:BAC52537 (EMBL:AP005961) (291 aa) fasta scores: E(): 3.2e-70, 65.97% id in 288 aa, and to Pseudomonas aeruginosa probable dihydrodipicolinate synthetase pa0223 SWALL:Q9I6R5 (EMBL:AE004460) (293 aa) fasta scores: E(): 8.8e-24, 32.29% id in 288 aa; dihydrodipicolinate synthetase 4965424 2883445 ECA4425 Pectobacterium atrosepticum SCRI1043 dihydrodipicolinate synthetase YP_052510.1 4964540 R 218491 CDS YP_052511.1 50123344 2883386 complement(4965493..4967043) 1 NC_004547.2 Similar to Ralstonia solanacearum probable substrate-binding periplasmic rsc0044 or rs01867 SWALL:Q8Y3D6 (EMBL:AL646057) (530 aa) fasta scores: E(): 8.5e-82, 45.54% id in 516 aa, and to Agrobacterium tumefaciens ABC transporter, substrate binding protein atu5253 or agr_pat_361 SWALL:Q8UK70 (EMBL:AE008948) (545 aa) fasta scores: E(): 2.8e-65, 39.53% id in 516 aa; extracellular solute-binding protein 4967043 2883386 ECA4426 Pectobacterium atrosepticum SCRI1043 extracellular solute-binding protein YP_052511.1 4965493 R 218491 CDS YP_052512.1 50123345 2883387 4967186..4968082 1 NC_004547.2 Similar to Agrobacterium tumefaciens regulatory protein NocR or atu6029 or agr_pti_70 SWALL:NOCR_AGRT5 (SWALL:Q00678) (300 aa) fasta scores: E(): 1.4e-28, 35.29% id in 289 aa, and to Rhizobium meliloti octopine catabolism/uptake operon regulatory protein OccR SWALL:OCCR_RHIME (SWALL:P72294) (297 aa) fasta scores: E(): 5.8e-23, 36.58% id in 287 aa; LysR family transcriptional regulator 4968082 2883387 ECA4427 Pectobacterium atrosepticum SCRI1043 LysR family transcriptional regulator YP_052512.1 4967186 D 218491 CDS YP_052513.1 50123346 2883388 complement(4968228..4969043) 1 NC_004547.2 YidA; catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate), mannose 1-phosphate and p-nitrophenyl phosphate; hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form; member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins; sugar phosphatase 4969043 2883388 ECA4428 Pectobacterium atrosepticum SCRI1043 sugar phosphatase YP_052513.1 4968228 R 218491 CDS YP_052514.1 50123347 2883389 complement(4969443..4969667) 1 NC_004547.2 Similar to the C-terminal region of Shewanella oneidensis issod4, transposase SWALL:AAN53461 (EMBL:AE015911) (400 aa) fasta scores: E(): 2.2e-14, 66.12% id in 62 aa, and to Yersinia pestis transposase SWALL:O68702 (EMBL:AF053946) (99 aa) fasta scores: E(): 4.9e-17, 77.41% id in 62 aa; transposase 4969667 2883389 ECA4429 Pectobacterium atrosepticum SCRI1043 transposase YP_052514.1 4969443 R 218491 CDS YP_052515.1 50123348 2883105 complement(4969669..4970379) 1 NC_004547.2 Similar to Shewanella oneidensis hypothetical protein soa0070 SWALL:AAN53005 (EMBL:AE015914) (234 aa) fasta scores: E(): 1.5e-30, 42.01% id in 238 aa, and to Shewanella oneidensis hypothetical protein soa0150 SWALL:AAN53066 (EMBL:AE015921) (221 aa) fasta scores: E(): 7e-28, 42.22% id in 225 aa; lipoprotein 4970379 2883105 ECA4430 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_052515.1 4969669 R 218491 CDS YP_052516.1 50123349 2883106 complement(4970379..4972373) 1 NC_004547.2 No significant database matches. Strongly similar to ECA2106 (87.651% id) and ECA4356 (87.783% id) and; hypothetical protein 4972373 2883106 ECA4431 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052516.1 4970379 R 218491 CDS YP_052517.1 50123350 2882019 complement(4972974..4974416) 1 NC_004547.2 Similar to Escherichia coli 6-phospho-beta-glucosidase BglA or b2901 SWALL:BGLA_ECOLI (SWALL:Q46829) (479 aa) fasta scores: E(): 2.5e-159, 76.21% id in 475 aa, and to Bacillus subtilis 6-phospho-beta-glucosidase BglA SWALL:BGLA_BACSU (SWALL:P42973) (479 aa) fasta scores: E(): 3.2e-128, 62.18% id in 476 aa. Also similar to ECA1871 (ArbB) (53.669% id), ECA0662 (51.875% id), ECA4407 (32.500% id), ECA2166 (50.103% id), ECA4387 (49.899% id), ECA0859 (40.733% id), ECA1451 (39.754% id) and to ECA3646 (429.878% id); 6-phospho-beta-glucosidase 4974416 bglA 2882019 bglA Pectobacterium atrosepticum SCRI1043 6-phospho-beta-glucosidase YP_052517.1 4972974 R 218491 CDS YP_052518.1 50123351 2883107 complement(4974429..4974776) 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, Escherichia coli O157:H7, and Shigella flexneri PTS system, cellobiose-specific IIa component celc or b1736 or c2135 or z2766 or ecs2442 or sf1490 SWALL:PTCA_ECOLI (SWALL:P17335) (116 aa) fasta scores: E(): 8e-14, 47.47% id in 99 aa; PTS system cellobiose-specific transporter subunit IIA 4974776 2883107 ECA4433 Pectobacterium atrosepticum SCRI1043 PTS system cellobiose-specific transporter subunit IIA YP_052518.1 4974429 R 218491 CDS YP_052519.1 50123352 2883006 complement(4974766..4976079) 1 NC_004547.2 Similar to Streptococcus mutans PTS system, lactose-specific IIbc component lace or smu.1491 SWALL:PTLB_STRMU (SWALL:P50976) (568 aa) fasta scores: E(): 5.9e-45, 35.37% id in 441 aa, and to Vibrio cholerae PTS system, cellobiose-specific iic component vc1282 SWALL:Q9KSH4 (EMBL:AE004207) (446 aa) fasta scores: E(): 3.7e-98, 54.37% id in 423 aa; PTS system transporter subunit IIBC 4976079 2883006 ECA4434 Pectobacterium atrosepticum SCRI1043 PTS system transporter subunit IIBC YP_052519.1 4974766 R 218491 CDS YP_052520.1 50123353 2883007 complement(4976096..4976401) 1 NC_004547.2 Similar to Bacillus subtilis PTS system, lichenan-specific IIb component LicB or CelA SWALL:PTCB_BACSU (SWALL:P46318) (102 aa) fasta scores: E(): 1.5e-11, 48.95% id in 96 aa, and to Vibrio cholerae PTS system, cellobiose-specific iib component vc1281 SWALL:Q9KSH5 (EMBL:AE004207) (101 aa) fasta scores: E(): 4.4e-17, 53.46% id in 101 aa; PTS system transporter subunit IIB 4976401 2883007 ECA4435 Pectobacterium atrosepticum SCRI1043 PTS system transporter subunit IIB YP_052520.1 4976096 R 218491 CDS YP_052521.1 50123354 2883008 4976615..4977652 1 NC_004547.2 Similar to Escherichia coli cryptic asc operon repressor AscG or b2714 SWALL:ASCG_ECOLI (SWALL:P24242) (336 aa) fasta scores: E(): 3.8e-74, 58.61% id in 331 aa, and to Salmonella typhimurium transcriptional regulator stm3012 SWALL:Q8ZMA3 (EMBL:AE008838) (340 aa) fasta scores: E(): 3.5e-60, 49.85% id in 335 aa; LacI family transcriptional regulator 4977652 2883008 ECA4436 Pectobacterium atrosepticum SCRI1043 LacI family transcriptional regulator YP_052521.1 4976615 D 218491 CDS YP_052522.1 50123355 2883009 4977725..4978915 1 NC_004547.2 Similar to Pseudomonas putida hypothetical protein pp2034 SWALL:AAN67648 (EMBL:AE016781) (419 aa) fasta scores: E(): 1.6e-73, 54.35% id in 390 aa, and to Bradyrhizobium japonicum Bll1005 protein bll1005 SWALL:BAC46270 (EMBL:AP005938) (402 aa) fasta scores: E(): 4.5e-66, 51.26% id in 394 aa; MFS efflux transporter 4978915 2883009 ECA4437 Pectobacterium atrosepticum SCRI1043 MFS efflux transporter YP_052522.1 4977725 D 218491 CDS YP_052523.1 50123356 2883510 complement(4979023..4981440) 1 NC_004547.2 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 4981440 gyrB 2883510 gyrB Pectobacterium atrosepticum SCRI1043 DNA gyrase subunit B YP_052523.1 4979023 R 218491 CDS YP_052524.1 50123357 2885292 complement(4981459..4982544) 1 NC_004547.2 Required for DNA replication; binds preferentially to single-stranded, linear DNA; recombination protein F 4982544 recF 2885292 recF Pectobacterium atrosepticum SCRI1043 recombination protein F YP_052524.1 4981459 R 218491 CDS YP_052525.1 50123358 2882237 complement(4982594..4983694) 1 NC_004547.2 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 4983694 dnaN 2882237 dnaN Pectobacterium atrosepticum SCRI1043 DNA polymerase III subunit beta YP_052525.1 4982594 R 218491 CDS YP_052526.1 50123359 2882799 complement(4983699..4985096) 1 NC_004547.2 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 4985096 dnaA 2882799 dnaA Pectobacterium atrosepticum SCRI1043 chromosomal replication initiation protein YP_052526.1 4983699 R 218491 CDS YP_052527.1 50123360 2883003 complement(4985355..4985720) 1 NC_004547.2 hypothetical protein 4985720 2883003 ECA4442 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052527.1 4985355 R 218491 CDS YP_052528.1 50123361 2883004 4985770..4985910 1 NC_004547.2 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 4985910 rpmH 2883004 rpmH Pectobacterium atrosepticum SCRI1043 50S ribosomal protein L34 YP_052528.1 4985770 D 218491 CDS YP_052529.1 50123362 2885033 4985929..4986288 1 NC_004547.2 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; ribonuclease P 4986288 rnpA 2885033 rnpA Pectobacterium atrosepticum SCRI1043 ribonuclease P YP_052529.1 4985929 D 218491 CDS YP_052530.1 50123363 2883005 4986512..4988146 1 NC_004547.2 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 4988146 2883005 ECA4445 Pectobacterium atrosepticum SCRI1043 inner membrane protein translocase component YidC YP_052530.1 4986512 D 218491 CDS YP_052531.1 50123364 2884245 4988276..4989640 1 NC_004547.2 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 4989640 trmE 2884245 trmE Pectobacterium atrosepticum SCRI1043 tRNA modification GTPase TrmE YP_052531.1 4988276 D 218491 CDS YP_052532.1 50123365 2882986 4989709..4990275 1 NC_004547.2 hypothetical protein 4990275 2882986 ECA4447 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052532.1 4989709 D 218491 CDS YP_052533.1 50123366 2882987 4990460..4991356 1 NC_004547.2 Similar to Vibrio metschnikovii Orfc273-5 orfc273-5 SWALL:AAN33038 (EMBL:AF530480) (278 aa) fasta scores: E(): 3e-23, 57.03% id in 128 aa, and to Zymomonas mobilis hypothetical 36.8 kDa protein SWALL:Q9Z668 (EMBL:AF102543) (318 aa) fasta scores: E(): 6.5e-13, 37.95% id in 137 aa; hypothetical protein 4991356 2882987 ECA4448 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052533.1 4990460 D 218491 CDS YP_052534.1 50123367 2882988 complement(4991421..4992272) 1 NC_004547.2 Similar to Escherichia coli hypothetical protein ytfg or b4211 SWALL:YTFG_ECOLI (SWALL:P39315) (286 aa) fasta scores: E(): 6e-61, 66.54% id in 278 aa, and to Yersinia pestis hypothetical protein ypo1645 or y1806 SWALL:Q8ZFP8 (EMBL:AJ414149) (285 aa) fasta scores: E(): 3.2e-65, 68.79% id in 282 aa; hypothetical protein 4992272 2882988 ECA4449 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052534.1 4991421 R 218491 CDS YP_052535.1 50123368 2882989 4992373..4992792 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri hypothetical protein ytfh or b4212 or sf4275 SWALL:YTFH_ECOLI (SWALL:P39316) (126 aa) fasta scores: E(): 6.5e-28, 66.95% id in 115 aa, and to Salmonella typhimurium, and Salmonella typhi transcriptional regulator ytfh or stm4402 or sty4760 SWALL:Q8XGE7 (EMBL:AE008906) (128 aa) fasta scores: E(): 3.1e-27, 65.48% id in 113 aa; hypothetical protein 4992792 2882989 ECA4450 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052535.1 4992373 D 218491 CDS YP_052536.1 50123369 2881884 complement(4992909..4993331) 1 NC_004547.2 Similar to Yersinia pestis HmsS or ypo1954 or y2356 SWALL:P74989 (EMBL:U22837) (155 aa) fasta scores: E(): 8.8e-07, 28.77% id in 139 aa; hemin storage protein 4993331 hmsS 2881884 hmsS Pectobacterium atrosepticum SCRI1043 hemin storage protein YP_052536.1 4992909 R 218491 CDS YP_052537.1 50123370 2881306 complement(4993335..4994663) 1 NC_004547.2 predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein; N-glycosyltransferase 4994663 hmsR 2881306 hmsR Pectobacterium atrosepticum SCRI1043 N-glycosyltransferase YP_052537.1 4993335 R 218491 CDS YP_052538.1 50123371 2881304 complement(4994660..4996675) 1 NC_004547.2 in Yersinia this protein is involved in biofilm formation and hemin adsorption; related protein PgaB in Escherichia coli is an outer membrane N-deacetylase involved in poly-beta-1,6-N-acetyl-D-glucosamine (PGA) export; outer membrane N-deacetylase 4996675 pgaB 2881304 pgaB Pectobacterium atrosepticum SCRI1043 outer membrane N-deacetylase YP_052538.1 4994660 R 218491 CDS YP_052539.1 50123372 2881305 complement(4996687..4999149) 1 NC_004547.2 outer membrane protein essential for the synthesis of poly-beta-1,6-N-acetyl-D-glucosamine (PGA); adhesin required for biofilm formation; PgaA (HmsH) seems to translocate and/or dock PGA to the cell surface; member of the hmsHFRS (ycdSRQP or pgaABCD in Escherichia coli) operon in Yersinia; outer membrane protein PgaA 4999149 pgaA 2881305 pgaA Pectobacterium atrosepticum SCRI1043 outer membrane protein PgaA YP_052539.1 4996687 R 218491 CDS YP_052540.1 50123373 2882926 4999353..5000237 1 NC_004547.2 Similar to Xanthomonas axonopodis hypothetical protein Xac3950 SWALL:Q8PFN0 (EMBL:AE012044) (293 aa) fasta scores: E(): 9.4e-41, 37.94% id in 282 aa, and to Vibrio cholerae hypothetical protein Vc1772 SWALL:Q9KR71 (EMBL:AE004254) (286 aa) fasta scores: E(): 3e-24, 33.21% id in 283 aa; hypothetical protein 5000237 2882926 ECA4455 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052540.1 4999353 D 218491 CDS YP_052541.1 50123374 2884378 5001994..5003496 1 NC_004547.2 Similar to Salmonella typhimurium methyl viologen resistance protein SmvA or stm1574 SWALL:SMVA_SALTY (SWALL:P37594) (495 aa) fasta scores: E(): 5.1e-64, 41.33% id in 496 aa; methyl viologen resistance protein 5003496 smvA 2884378 smvA Pectobacterium atrosepticum SCRI1043 methyl viologen resistance protein YP_052541.1 5001994 D 218491 CDS YP_052542.1 50123375 2882928 complement(5003604..5004263) 1 NC_004547.2 Similar to Yersinia pestis lipoprotein ypo2970 or y1514 SWALL:Q8ZCL3 (EMBL:AJ414154) (218 aa) fasta scores: E(): 2.1e-56, 69.58% id in 217 aa, and to Ralstonia solanacearum probable lipoprotein rsp0675 or rs01774 SWALL:Q8XS06 (EMBL:AL646080) (223 aa) fasta scores: E(): 5.9e-47, 59.09% id in 220 aa; lipoprotein 5004263 2882928 ECA4458 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_052542.1 5003604 R 218491 CDS YP_052543.1 50123376 2882913 complement(5004260..5004619) 1 NC_004547.2 Similar to Yersinia pestis lipoprotein ypo2971 SWALL:Q8ZCL2 (EMBL:AJ414154) (118 aa) fasta scores: E(): 1.6e-25, 65.21% id in 115 aa, and to Ralstonia solanacearum probable lipoprotein rsp0674 or rs01775 SWALL:Q8XS07 (EMBL:AL646080) (125 aa) fasta scores: E(): 3.4e-17, 46.15% id in 117 aa; lipoprotein 5004619 2882913 ECA4459 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_052543.1 5004260 R 218491 CDS YP_052544.1 50123377 2882914 complement(5004638..5005309) 1 NC_004547.2 Similar to Yersinia pestis lipoprotein ypo2972 SWALL:Q8ZCL1 (EMBL:AJ414154) (223 aa) fasta scores: E(): 2.5e-65, 78.82% id in 222 aa, and to Pseudomonas aeruginosa hypothetical protein Pa0045 SWALL:Q9I787 (EMBL:AE004444) (228 aa) fasta scores: E(): 6.8e-58, 73.68% id in 209 aa; lipoprotein 5005309 2882914 ECA4460 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_052544.1 5004638 R 218491 CDS YP_052545.1 50123378 2883814 5005738..5007762 1 NC_004547.2 unknown function; in E. coli the aegA gene is regulated by Fnr, NarXL, and NarQ (but not ArcA), induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic); oxidoreductase Fe-S binding subunit 5007762 aegA 2883814 aegA Pectobacterium atrosepticum SCRI1043 oxidoreductase Fe-S binding subunit YP_052545.1 5005738 D 218491 CDS YP_052546.1 50123379 2882915 5007759..5008280 1 NC_004547.2 Similar to Escherichia coli, Escherichia coli O6, and Escherichia coli O157:H7 electron transport protein HydN or b2713 or c3269 or z4021 or ecs3569 SWALL:HYDN_ECOLI (SWALL:P30132) (175 aa) fasta scores: E(): 4e-33, 49.71% id in 173 aa; electron transport protein 5008280 2882915 ECA4462 Pectobacterium atrosepticum SCRI1043 electron transport protein YP_052546.1 5007759 D 218491 CDS YP_052547.1 50123380 2882916 5008470..5009213 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 hypothetical protein yiee or b3712 or c4635 SWALL:YIEE_ECOLI (SWALL:P31464) (253 aa) fasta scores: E(): 1.6e-25, 34.81% id in 247 aa, and to Salmonella typhimurium, and Salmonella typhi cytoplasmic protein yiee or stm3849 or sty3934 SWALL:Q8XF90 (EMBL:AE008879) (251 aa) fasta scores: E(): 6.4e-24, 33.33% id in 237 aa; hypothetical protein 5009213 2882916 ECA4463 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052547.1 5008470 D 218491 CDS YP_052548.1 50123381 2882265 complement(5009268..5010680) 1 NC_004547.2 Similar to Yersinia pestis membrane/transport protein, symporter y4121 SWALL:AAM87663 (EMBL:AE014013) (461 aa) fasta scores: E(): 3e-144, 89.13% id in 460 aa, and to Salmonella typhimurium xanthine/uracil permeases family yieg or stm3851 SWALL:Q8ZKX8 (EMBL:AE008879) (487 aa) fasta scores: E(): 2e-135, 83.59% id in 451 aa; permease 5010680 2882265 ECA4464 Pectobacterium atrosepticum SCRI1043 permease YP_052548.1 5009268 R 218491 CDS YP_052549.1 50123382 2882266 complement(5010677..5010967) 1 NC_004547.2 Similar to Salmonella typhimurium, and Salmonella typhi phage shock protein PspD or stm1687 or sty1374 SWALL:Q8XEN8 (EMBL:AE008775) (72 aa) fasta scores: E(): 2.4, 31.08% id in 74 aa, and to Salmonella typhi phage shock protein D PspD or t1592 SWALL:AAO69223 (EMBL:AE016839) (72 aa) fasta scores: E(): 2.4, 31.08% id in 74 aa; hypothetical protein 5010967 2882266 ECA4465 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052549.1 5010677 R 218491 CDS YP_052550.1 50123383 2882267 5011178..5011843 1 NC_004547.2 YieH; catalyzes the dephosphorylation of phosphoenolpyruvate, AMP and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; member of the haloacid dehalogenase-like hydrolases superfamily; 6-phosphogluconate phosphatase 5011843 2882267 ECA4466 Pectobacterium atrosepticum SCRI1043 6-phosphogluconate phosphatase YP_052550.1 5011178 D 218491 CDS YP_052551.1 50123384 2881543 complement(5011923..5012651) 1 NC_004547.2 Similar to Yersinia pestis amino acid transport system permease ypo4109 SWALL:Q8Z9T6 (EMBL:AJ414160) (251 aa) fasta scores: E(): 6.5e-74, 82.44% id in 245 aa, and to Pseudomonas aeruginosa probable amino acid permease pa2202 SWALL:Q9I1R5 (EMBL:AE004646) (225 aa) fasta scores: E(): 1e-52, 66.66% id in 216 aa; binding-protein-dependent transport system inner membrane protein 5012651 2881543 ECA4467 Pectobacterium atrosepticum SCRI1043 binding-protein-dependent transport system inner membrane protein YP_052551.1 5011923 R 218491 CDS YP_052552.1 50123385 2881544 complement(5012653..5013396) 1 NC_004547.2 Similar to Yersinia pestis ABC transporter permease ypo4110 or gltj or y4124 SWALL:AAM87666 (EMBL:AJ414160) (245 aa) fasta scores: E(): 4.7e-70, 75.72% id in 243 aa, and to Pseudomonas aeruginosa probable amino acid permease pa2203 SWALL:Q9I1R4 (EMBL:AE004646) (238 aa) fasta scores: E(): 5.6e-47, 62.88% id in 229 aa; binding-protein-dependent transport system inner membrane protein 5013396 2881544 ECA4468 Pectobacterium atrosepticum SCRI1043 binding-protein-dependent transport system inner membrane protein YP_052552.1 5012653 R 218491 CDS YP_052553.1 50123386 2881545 complement(5013698..5014534) 1 NC_004547.2 Similar to Yersinia pestis periplasmic solute-binding protein ypo4111 or y4125 SWALL:Q8Z9T4 (EMBL:AJ414160) (284 aa) fasta scores: E(): 2e-86, 83.81% id in 278 aa, and to Pseudomonas aeruginosa probable binding protein component of ABC transporter pa2204 SWALL:Q9I1R3 (EMBL:AE004647) (268 aa) fasta scores: E(): 1.6e-55, 58.77% id in 262 aa; extracellular solute-binding protein 5014534 2881545 ECA4470 Pectobacterium atrosepticum SCRI1043 extracellular solute-binding protein YP_052553.1 5013698 R 218491 CDS YP_052554.1 50123387 2882564 complement(5014662..5015861) 1 NC_004547.2 Similar to Acinetobacter calcoaceticus benzoate membrane transport protein BenE SWALL:BENE_ACICA (SWALL:P07775) (394 aa) fasta scores: E(): 2.2e-55, 41.2% id in 381 aa, and to Salmonella typhi benzoate membrane transport protein sty1458 SWALL:Q8Z753 (EMBL:AL627270) (412 aa) fasta scores: E(): 2.9e-80, 57.03% id in 391 aa; benzoate transport protein 5015861 benE 2882564 benE Pectobacterium atrosepticum SCRI1043 benzoate transport protein YP_052554.1 5014662 R 218491 CDS YP_052555.1 50123388 2881546 5015940..5016497 1 NC_004547.2 Similar to Escherichia coli hypothetical protein ydcn or b1434 SWALL:YDCN_ECOLI (SWALL:P77626) (178 aa) fasta scores: E(): 2.1e-36, 54.64% id in 183 aa, and to Salmonella typhi DNA-binding protein t1514 SWALL:AAO69149 (EMBL:AE016839) (178 aa) fasta scores: E(): 1.6e-35, 54.09% id in 183 aa; DNA-binding protein 5016497 2881546 ECA4472 Pectobacterium atrosepticum SCRI1043 DNA-binding protein YP_052555.1 5015940 D 218491 CDS YP_052556.1 50123389 2883718 complement(5016804..5017538) 1 NC_004547.2 regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon; transcriptional regulator PhoU 5017538 phoU 2883718 phoU Pectobacterium atrosepticum SCRI1043 transcriptional regulator PhoU YP_052556.1 5016804 R 218491 CDS YP_052557.1 50123390 2882476 complement(5017552..5018328) 1 NC_004547.2 ATP-binding protein; PstABCS is an ATP dependent phosphate uptake system which is responsible for inorganic phosphate uptake during phosphate starvation; phosphate transporter ATP-binding protein 5018328 pstB 2882476 pstB Pectobacterium atrosepticum SCRI1043 phosphate transporter ATP-binding protein YP_052557.1 5017552 R 218491 CDS YP_052558.1 50123391 2882474 complement(5018414..5019301) 1 NC_004547.2 Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PtsA 5019301 pstA 2882474 pstA Pectobacterium atrosepticum SCRI1043 phosphate transporter permease subunit PtsA YP_052558.1 5018414 R 218491 CDS YP_052559.1 50123392 2882462 complement(5019301..5020260) 1 NC_004547.2 part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; phosphate transporter permease subunit PstC 5020260 pstC 2882462 pstC Pectobacterium atrosepticum SCRI1043 phosphate transporter permease subunit PstC YP_052559.1 5019301 R 218491 CDS YP_052560.1 50123393 2882463 complement(5020423..5021463) 1 NC_004547.2 Similar to Escherichia coli, and Shigella flexneri phosphate-binding periplasmic protein precursor PstS or PhoS or b3728 or sf3727 SWALL:PSTS_ECOLI (SWALL:P06128) (346 aa) fasta scores: E(): 4.6e-109, 82.65% id in 346 aa; phosphate ABC transporter periplasmic substrate-binding protein PstS 5021463 pstS 2882463 pstS Pectobacterium atrosepticum SCRI1043 phosphate ABC transporter periplasmic substrate-binding protein PstS YP_052560.1 5020423 R 218491 CDS YP_052561.1 50123394 2881214 complement(5021802..5022536) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O157:H7 glutamate/aspartate transport ATP-binding protein GltL or b0652 or z0802 or ecs0691 SWALL:GLTL_ECOLI (SWALL:P41076) (241 aa) fasta scores: E(): 5.3e-49, 61.66% id in 240 aa; amino acid ABC transporter ATP-binding protein 5022536 2881214 ECA4478 Pectobacterium atrosepticum SCRI1043 amino acid ABC transporter ATP-binding protein YP_052561.1 5021802 R 218491 CDS YP_052562.1 50123395 2881215 complement(5022533..5023303) 1 NC_004547.2 Similar to Ralstonia solanacearum probable amino acid transmembrane ABC transporter protein rsp0933 or rs05400 SWALL:Q8XRC5 (EMBL:AL646081) (248 aa) fasta scores: E(): 2.3e-55, 60.26% id in 229 aa, and to Agrobacterium tumefaciens ABC transporter, membrane spanning protein atu4282 or agr_l_1163 SWALL:Q8U817 (EMBL:AE009356) (252 aa) fasta scores: E(): 1.1e-50, 56.38% id in 227 aa; amino acid ABC transporter permease 5023303 2881215 ECA4479 Pectobacterium atrosepticum SCRI1043 amino acid ABC transporter permease YP_052562.1 5022533 R 218491 CDS YP_052563.1 50123396 2881216 complement(5023309..5024004) 1 NC_004547.2 Similar to Escherichia coli, and Escherichia coli O6 glutamate/aspartate transport system permease protein GltJ or b0654 or c0738 SWALL:GLTJ_ECOLI (SWALL:P41074) (246 aa) fasta scores: E(): 2.8e-19, 30.94% id in 223 aa, and to Agrobacterium tumefaciens ABC transporter, membrane spanning protein atu4281 or agr_l_1164 SWALL:Q8U818 (EMBL:AE009356) (235 aa) fasta scores: E(): 9.3e-48, 57.01% id in 221 aa; amino acid ABC transporter permease 5024004 2881216 ECA4480 Pectobacterium atrosepticum SCRI1043 amino acid ABC transporter permease YP_052563.1 5023309 R 218491 CDS YP_052564.1 50123397 2881506 complement(5024025..5024777) 1 NC_004547.2 Similar to Agrobacterium tumefaciens short-chain dehydrogenase atu4280 or agr_l_1165 SWALL:Q8U819 (EMBL:AE009356) (259 aa) fasta scores: E(): 9.9e-61, 66.12% id in 245 aa, and to Ralstonia solanacearum probable oxidoreductase protein rsp0935 or rs05398 SWALL:Q8XRC3 (EMBL:AL646081) (250 aa) fasta scores: E(): 4.9e-67, 70.56% id in 248 aa; short-chain dehydrogenase 5024777 2881506 ECA4481 Pectobacterium atrosepticum SCRI1043 short-chain dehydrogenase YP_052564.1 5024025 R 218491 CDS YP_052565.1 50123398 2881507 complement(5024880..5025287) 1 NC_004547.2 Similar to Bradyrhizobium japonicum Bll3635 protein bll3635 SWALL:Q89P48 (EMBL:AP005948) (141 aa) fasta scores: E(): 2.8e-07, 32.84% id in 137 aa, and to Pseudomonas syringae conserved hypothetical protein pspto2918 SWALL:Q881H5 (EMBL:AE016866) (135 aa) fasta scores: E(): 0.00068, 26.31% id in 133 aa; hypothetical protein 5025287 2881507 ECA4482 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052565.1 5024880 R 218491 CDS YP_052566.1 50123399 2885164 complement(5025430..5026353) 1 NC_004547.2 Transcriptional activator for the hut, put and ure operons and repressor for the gdh and gltB operons in response to nitrogen limitation; nitrogen assimilation transcriptional regulator 5026353 nac 2885164 nac Pectobacterium atrosepticum SCRI1043 nitrogen assimilation transcriptional regulator YP_052566.1 5025430 R 218491 CDS YP_052567.1 50123400 2881508 5026476..5026682 1 NC_004547.2 hypothetical protein 5026682 2881508 ECA4484 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052567.1 5026476 D 218491 CDS YP_052568.1 50123401 2885151 5026700..5027902 1 NC_004547.2 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 5027902 aatA 2885151 aatA Pectobacterium atrosepticum SCRI1043 aspartate aminotransferase YP_052568.1 5026700 D 218491 CDS YP_052569.1 50123402 2881509 complement(5027972..5028745) 1 NC_004547.2 Similar to Agrobacterium tumefaciens hypothetical protein atu4277 or agr_l_1172 SWALL:Q8U822 (EMBL:AE009356) (263 aa) fasta scores: E(): 3.3e-64, 66.27% id in 252 aa, and to Bradyrhizobium japonicum Blr3634 protein blr3634 SWALL:BAC48899 (EMBL:AP005948) (255 aa) fasta scores: E(): 1.6e-57, 63.2% id in 250 aa; LamB/YcsF family protein 5028745 2881509 ECA4486 Pectobacterium atrosepticum SCRI1043 LamB/YcsF family protein YP_052569.1 5027972 R 218491 CDS YP_052570.1 50123403 2881625 complement(5028745..5029737) 1 NC_004547.2 Similar to Agrobacterium tumefaciens hypothetical protein atu4276 or agr_l_1174 SWALL:Q8U823 (EMBL:AE009356) (331 aa) fasta scores: E(): 1.5e-66, 57.41% id in 317 aa, and to Bradyrhizobium japonicum Blr3633 protein blr3633 SWALL:BAC48898 (EMBL:AP005948) (325 aa) fasta scores: E(): 6.3e-57, 50% id in 320 aa; allophanate hydrolase subunit 2 5029737 2881625 ECA4487 Pectobacterium atrosepticum SCRI1043 allophanate hydrolase subunit 2 YP_052570.1 5028745 R 218491 CDS YP_052571.1 50123404 2881626 complement(5029734..5030435) 1 NC_004547.2 Similar to Agrobacterium tumefaciens hypothetical protein atu4275 or agr_l_1175 SWALL:Q8U824 (EMBL:AE009356) (235 aa) fasta scores: E(): 2.3e-49, 57.45% id in 228 aa, and to Bradyrhizobium japonicum Blr3632 protein blr3632 SWALL:BAC48897 (EMBL:AP005948) (239 aa) fasta scores: E(): 4.8e-39, 51.64% id in 213 aa; allophanate hydrolase subunit 1 5030435 2881626 ECA4488 Pectobacterium atrosepticum SCRI1043 allophanate hydrolase subunit 1 YP_052571.1 5029734 R 218491 CDS YP_052572.1 50123405 2881627 complement(5030439..5031278) 1 NC_004547.2 Similar to Ralstonia solanacearum probable amino-acid-binding periplasmic ABC transporter protein rsp0931 or rs05402 SWALL:Q8XRC7 (EMBL:AL646081) (280 aa) fasta scores: E(): 1.3e-54, 53.4% id in 279 aa, and to Ralstonia solanacearum probable amino-acid-binding periplasmic ABC transporter protein rsc2257 or rs01302 SWALL:Q8XX59 (EMBL:AL646069) (284 aa) fasta scores: E(): 1e-25, 33.33% id in 255 aa; extracellular solute-binding protein 5031278 2881627 ECA4489 Pectobacterium atrosepticum SCRI1043 extracellular solute-binding protein YP_052572.1 5030439 R 218491 CDS YP_052573.1 50123406 2881573 5031540..5032457 1 NC_004547.2 Similar to Rhizobium meliloti hypothetical transmembrane protein smc02371 r01027 or smc02371 SWALL:Q92R83 (EMBL:AL591785) (312 aa) fasta scores: E(): 5.7e-37, 41.27% id in 298 aa, and to Brucella melitensis transporter, dme family bmei1323 SWALL:Q8YG39 (EMBL:AE009570) (319 aa) fasta scores: E(): 1.6e-36, 39.51% id in 291 aa; hypothetical protein 5032457 2881573 ECA4490 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052573.1 5031540 D 218491 CDS YP_052574.1 50123407 2881574 complement(5032592..5033818) 1 NC_004547.2 FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 5033818 2881574 ECA4491 Pectobacterium atrosepticum SCRI1043 3-oxoacyl-ACP synthase YP_052574.1 5032592 R 218491 CDS YP_052575.1 50123408 2881575 complement(5033818..5034549) 1 NC_004547.2 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 5034549 fabG 2881575 fabG Pectobacterium atrosepticum SCRI1043 3-ketoacyl-ACP reductase YP_052575.1 5033818 R 218491 CDS YP_052576.1 50123409 2881576 complement(5034588..5035070) 1 NC_004547.2 Similar to Streptococcus pyogenes, and Streptococcus pyogenes FabZ or spy1746 or spym18_1818 SWALL:FABZ_STRPY (SWALL:P58175) (139 aa) fasta scores: E(): 8e-05, 32.84% id in 137 aa, and to Escherichia coli O157:H7 beta-hydroxydecanoyl-ACP dehydrase z4864 or ecs4339 SWALL:Q8X6K7 (EMBL:AE005571) (154 aa) fasta scores: E(): 2.8e-29, 51.59% id in 157 aa; beta-hydroxydecanoyl-ACP dehydrase 5035070 2881576 ECA4493 Pectobacterium atrosepticum SCRI1043 beta-hydroxydecanoyl-ACP dehydrase YP_052576.1 5034588 R 218491 CDS YP_052577.1 50123410 2881972 complement(5035063..5036220) 1 NC_004547.2 FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 5036220 2881972 ECA4494 Pectobacterium atrosepticum SCRI1043 3-oxoacyl-ACP synthase YP_052577.1 5035063 R 218491 CDS YP_052578.1 50123411 2881973 complement(5036222..5036797) 1 NC_004547.2 Similar to Escherichia coli O157:H7 z4862 protein z4862 or ecs4337 SWALL:Q8X6L1 (EMBL:AE005571) (194 aa) fasta scores: E(): 2.6e-49, 65.4% id in 185 aa, and to Vibrio vulnificus conserved hypothetical protein vv10057 SWALL:AAO08599 (EMBL:AE016797) (183 aa) fasta scores: E(): 2.9e-09, 35.22% id in 159 aa; lipoprotein 5036797 2881973 ECA4495 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_052578.1 5036222 R 218491 CDS YP_052579.1 50123412 2881974 complement(5036794..5039115) 1 NC_004547.2 Similar to Escherichia coli O6 conserved hypothetical protein c1191 SWALL:AAN79653 (EMBL:AE016758) (772 aa) fasta scores: E(): 8.3e-184, 64.43% id in 762 aa, and to Vibrio vulnificus predicted exporter vv10056 SWALL:AAO08598 (EMBL:AE016797) (756 aa) fasta scores: E(): 5.4e-85, 36.17% id in 763 aa; hypothetical protein 5039115 2881974 ECA4496 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052579.1 5036794 R 218491 CDS YP_052580.1 50123413 2882489 complement(5039087..5039692) 1 NC_004547.2 Similar to Escherichia coli O6 conserved hypothetical protein c1192 SWALL:AAN79654 (EMBL:AE016758) (201 aa) fasta scores: E(): 5.5e-45, 60% id in 190 aa, and to Vibrio vulnificus conserved hypothetical protein vv10055 SWALL:AAO08597 (EMBL:AE016797) (208 aa) fasta scores: E(): 1.7e-24, 37.87% id in 198 aa; hypothetical protein 5039692 2882489 ECA4497 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052580.1 5039087 R 218491 CDS YP_052581.1 50123414 2882490 complement(5039689..5040111) 1 NC_004547.2 Similar to Escherichia coli O6 hypothetical protein c1193 SWALL:AAN79655 (EMBL:AE016758) (140 aa) fasta scores: E(): 5.7e-45, 76.42% id in 140 aa, and to Vibrio vulnificus predicted thioesterase vv10054 SWALL:AAO08596 (EMBL:AE016797) (148 aa) fasta scores: E(): 4.2e-27, 52.3% id in 130 aa; thioesterase 5040111 2882490 ECA4498 Pectobacterium atrosepticum SCRI1043 thioesterase YP_052581.1 5039689 R 218491 CDS YP_052582.1 50123415 2882491 complement(5040111..5041826) 1 NC_004547.2 Similar to Escherichia coli O6 enzyme c1194 SWALL:AAN79656 (EMBL:AE016758) (540 aa) fasta scores: E(): 2.2e-148, 66.17% id in 541 aa, and to Vibrio vulnificus predicted acyltransferase vv10052 SWALL:AAO08594 (EMBL:AE016797) (569 aa) fasta scores: E(): 1.5e-122, 54% id in 574 aa; glycosyl transferase family protein 5041826 2882491 ECA4499 Pectobacterium atrosepticum SCRI1043 glycosyl transferase family protein YP_052582.1 5040111 R 218491 CDS YP_052583.1 50123416 2882492 complement(5041817..5042206) 1 NC_004547.2 Similar to Escherichia coli O6 conserved hypothetical protein c1196 SWALL:AAN79658 (EMBL:AE016758) (125 aa) fasta scores: E(): 3.4e-24, 54.78% id in 115 aa, and to Vibrio vulnificus 3-hydroxymyristoyl/3-hydroxydecanoyl- vv10051 SWALL:AAO08593 (EMBL:AE016797) (123 aa) fasta scores: E(): 2.4e-14, 49.12% id in 114 aa; hypothetical protein 5042206 2882492 ECA4500 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052583.1 5041817 R 218491 CDS YP_052584.1 50123417 2881472 complement(5042193..5043548) 1 NC_004547.2 Similar to Escherichia coli O157:H7 enzyme z4856 or ecs4331 SWALL:Q8X6M3 (EMBL:AE005571) (453 aa) fasta scores: E(): 3.5e-72, 46.3% id in 447 aa, and to Vibrio vulnificus acyl-coenzyme A synthetase vv10050 SWALL:Q8DG01 (EMBL:AE016797) (455 aa) fasta scores: E(): 9.7e-48, 37.86% id in 441 aa; AMP-binding protein 5043548 2881472 ECA4501 Pectobacterium atrosepticum SCRI1043 AMP-binding protein YP_052584.1 5042193 R 218491 CDS YP_052585.1 50123418 2881473 complement(5043545..5044123) 1 NC_004547.2 Similar to Escherichia coli O6 conserved hypothetical protein c1198 SWALL:AAN79660 (EMBL:AE016758) (194 aa) fasta scores: E(): 2.3e-36, 52.4% id in 187 aa, and to Vibrio vulnificus predicted membrane protein vv10049 SWALL:AAO08591 (EMBL:AE016797) (185 aa) fasta scores: E(): 6.6e-27, 42.32% id in 189 aa; hypothetical protein 5044123 2881473 ECA4502 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052585.1 5043545 R 218491 CDS YP_052586.1 50123419 2881474 complement(5044136..5044387) 1 NC_004547.2 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 5044387 2881474 ECA4503 Pectobacterium atrosepticum SCRI1043 acyl carrier protein YP_052586.1 5044136 R 218491 CDS YP_052587.1 50123420 2885352 complement(5044405..5044671) 1 NC_004547.2 Similar to Escherichia coli O6 acyl carrier protein c1200 SWALL:AAN79662 (EMBL:AE016758) (85 aa) fasta scores: E(): 4.9e-22, 72.94% id in 85 aa, and to Vibrio vulnificus acyl carrier protein vv10047 SWALL:AAO08589 (EMBL:AE016797) (86 aa) fasta scores: E(): 1.5e-18, 65.06% id in 83 aa; acyl carrier protein 5044671 2885352 ECA4504 Pectobacterium atrosepticum SCRI1043 acyl carrier protein YP_052587.1 5044405 R 218491 CDS YP_052588.1 50123421 2885353 complement(5044691..5045479) 1 NC_004547.2 Similar to Escherichia coli O6 phospholipid biosynthesis acyltransferase c1201 SWALL:Q8FJ00 (EMBL:AE016758) (279 aa) fasta scores: E(): 6.5e-63, 61.56% id in 268 aa, and to Vibrio vulnificus 1-acyl-sn-glycerol-3-phosphate acyltransferase vv10046 SWALL:Q8DG05 (EMBL:AE016797) (252 aa) fasta scores: E(): 6.7e-40, 44% id in 250 aa; acyltransferase 5045479 2885353 ECA4505 Pectobacterium atrosepticum SCRI1043 acyltransferase YP_052588.1 5044691 R 218491 CDS YP_052589.1 50123422 2885354 complement(5045472..5046200) 1 NC_004547.2 Similar to Escherichia coli O157:H7 hypothetical protein z4851 or ecs4326 SWALL:Q8X6N8 (EMBL:AE005571) (240 aa) fasta scores: E(): 1.2e-50, 55.69% id in 237 aa, and to Pseudomonas syringae conserved hypothetical protein pspto5091 SWALL:Q87V50 (EMBL:AE016874) (239 aa) fasta scores: E(): 5.8e-21, 35.98% id in 239 aa; hypothetical protein 5046200 2885354 ECA4506 Pectobacterium atrosepticum SCRI1043 hypothetical protein YP_052589.1 5045472 R 218491 CDS YP_052590.1 50123423 2885355 complement(5046558..5046950) 1 NC_004547.2 Similar to Escherichia coli O6 conserved hypothetical protein c1204 SWALL:Q8FIZ7 (EMBL:AE016758) (129 aa) fasta scores: E(): 1.2e-18, 46.4% id in 125 aa, and to Vibrio vulnificus conserved hypothetical protein vv10044 SWALL:Q8DG07 (EMBL:AE016797) (118 aa) fasta scores: E(): 8e-12, 41.07% id in 112 aa; lipoprotein 5046950 2885355 ECA4507 Pectobacterium atrosepticum SCRI1043 lipoprotein YP_052590.1 5046558 R 218491 CDS YP_052591.1 50123424 2881759 complement(5047222..5049054) 1 NC_004547.2 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 5049054 glmS 2881759 glmS Pectobacterium atrosepticum SCRI1043 glucosamine--fructose-6-phosphate aminotransferase YP_052591.1 5047222 R 218491 CDS YP_052592.1 50123425 2881760 complement(5049240..5050610) 1 NC_004547.2 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 5050610 glmU 2881760 glmU Pectobacterium atrosepticum SCRI1043 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_052592.1 5049240 R 218491 CDS YP_052593.1 50123426 2884510 5050936..5053170 1 NC_004547.2 Similar to Erwinia chrysanthemi exopolygalacturonate lyase PelX SWALL:Q9Z5P8 (EMBL:Y16797) (734 aa) fasta scores: E(): 1.9e-206, 73.8% id in 733 aa, and to Erwinia chrysanthemi pectate disaccharide-lyase precursor PelX SWALL:PELX_ERWCH (SWALL:P22751) (749 aa) fasta scores: E(): 2.8e-195, 74.16% id in 689 aa; exopolygalacturonate lyase 5053170 pelX 2884510 pelX Pectobacterium atrosepticum SCRI1043 exopolygalacturonate lyase YP_052593.1 5050936 D 218491 CDS YP_052594.1 50123427 2881666 complement(5053527..5053946) 1 NC_004547.2 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; ATP synthase F0F1 subunit epsilon 5053946 atpC 2881666 atpC Pectobacterium atrosepticum SCRI1043 ATP synthase F0F1 subunit epsilon YP_052594.1 5053527 R 218491 CDS YP_052595.1 50123428 2881667 complement(5053966..5055348) 1 NC_004547.2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 5055348 atpD 2881667 atpD Pectobacterium atrosepticum SCRI1043 ATP synthase F0F1 subunit beta YP_052595.1 5053966 R 218491 CDS YP_052596.1 50123429 2881684 complement(5055396..5056259) 1 NC_004547.2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; ATP synthase F0F1 subunit gamma 5056259 atpG 2881684 atpG Pectobacterium atrosepticum SCRI1043 ATP synthase F0F1 subunit gamma YP_052596.1 5055396 R 218491 CDS YP_052597.1 50123430 2881654 complement(5056312..5057853) 1 NC_004547.2 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 5057853 atpA 2881654 atpA Pectobacterium atrosepticum SCRI1043 ATP synthase F0F1 subunit alpha YP_052597.1 5056312 R 218491 CDS YP_052598.1 50123431 2881685 complement(5057866..5058399) 1 NC_004547.2 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta 5058399 atpH 2881685 atpH Pectobacterium atrosepticum SCRI1043 ATP synthase F0F1 subunit delta YP_052598.1 5057866 R 218491 CDS YP_052599.1 50123432 2881679 complement(5058414..5058884) 1 NC_004547.2 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; ATP synthase F0F1 subunit B 5058884 atpF 2881679 atpF Pectobacterium atrosepticum SCRI1043 ATP synthase F0F1 subunit B YP_052599.1 5058414 R 218491 CDS YP_052600.1 50123433 2881678 complement(5058948..5059187) 1 NC_004547.2 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 5059187 atpE 2881678 atpE Pectobacterium atrosepticum SCRI1043 F0F1 ATP synthase subunit C YP_052600.1 5058948 R 218491 CDS YP_052601.1 50123434 2881655 complement(5059237..5060037) 1 NC_004547.2 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A 5060037 atpB 2881655 atpB Pectobacterium atrosepticum SCRI1043 ATP synthase F0F1 subunit A YP_052601.1 5059237 R 218491 CDS YP_052602.1 50123435 2881686 complement(5060059..5060442) 1 NC_004547.2 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation; F0F1 ATP synthase subunit I 5060442 atpI 2881686 atpI Pectobacterium atrosepticum SCRI1043 F0F1 ATP synthase subunit I YP_052602.1 5060059 R 218491 CDS YP_052603.1 50123436 2882457 complement(5061066..5061686) 1 NC_004547.2 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 5061686 gidB 2882457 gidB Pectobacterium atrosepticum SCRI1043 16S rRNA methyltransferase GidB YP_052603.1 5061066 R 218491 CDS YP_052604.1 50123437 2882456 complement(5061770..5063659) 1 NC_004547.2 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 5063659 gidA 2882456 gidA Pectobacterium atrosepticum SCRI1043 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_052604.1 5061770 R 218491 CDS