-- dump date 20110803_100544 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type PAS_chr1-3_0003 254564465 8196519 5018..6499 1 NC_012963.1 hypothetical protein 6499 8196519 PAS_chr1-3_0003 Pichia pastoris GS115 hypothetical protein XP_002489343.1 5018 D 644223 CDS PAS_chr1-3_0004 254564467 8197942 complement(10239..11735) 1 NC_012963.1 hexose transporter 11735 8197942 PAS_chr1-3_0004 Pichia pastoris GS115 hexose transporter XP_002489344.1 10239 R 644223 CDS PAS_chr1-3_0005 254564469 8197943 12198..13325 1 NC_012963.1 hypothetical protein 13325 8197943 PAS_chr1-3_0005 Pichia pastoris GS115 hypothetical protein XP_002489345.1 12198 D 644223 CDS PAS_chr1-3_0008 254564471 8197944 complement(14951..15364) 1 NC_012963.1 hypothetical protein 15364 8197944 PAS_chr1-3_0008 Pichia pastoris GS115 hypothetical protein XP_002489346.1 14951 R 644223 CDS PAS_chr1-3_0010 254564473 8197945 17266..19083 1 NC_012963.1 hypothetical protein 19083 8197945 PAS_chr1-3_0010 Pichia pastoris GS115 hypothetical protein XP_002489347.1 17266 D 644223 CDS PAS_chr1-3_0011 254564475 8197946 complement(19282..20943) 1 NC_012963.1 Putative transporter, member of the sugar porter family 20943 8197946 PAS_chr1-3_0011 Pichia pastoris GS115 Putative transporter, member of the sugar porter family XP_002489348.1 19282 R 644223 CDS PAS_chr1-3_0013 254564477 8197947 24468..25064 1 NC_012963.1 hypothetical protein 25064 8197947 PAS_chr1-3_0013 Pichia pastoris GS115 hypothetical protein XP_002489349.1 24468 D 644223 CDS PAS_chr1-3_0014 254564479 8197948 25978..27354 1 NC_012963.1 Flavin-containing monooxygenase, localized to the cytoplasmic face of the ER membrane 27354 8197948 PAS_chr1-3_0014 Pichia pastoris GS115 Flavin-containing monooxygenase, localized to the cytoplasmic face of the ER membrane XP_002489350.1 25978 D 644223 CDS PAS_chr1-3_0015 254564481 8197949 complement(27496..29475) 1 NC_012963.1 hypothetical protein 29475 8197949 PAS_chr1-3_0015 Pichia pastoris GS115 hypothetical protein XP_002489351.1 27496 R 644223 CDS PAS_chr1-3_0016 254564483 8197950 29840..30607 1 NC_012963.1 Multifunctional enzyme of the peroxisomal fatty acid beta-oxidation pathway 30607 8197950 PAS_chr1-3_0016 Pichia pastoris GS115 Multifunctional enzyme of the peroxisomal fatty acid beta-oxidation pathway XP_002489352.1 29840 D 644223 CDS PAS_chr1-3_0017 254564485 8197951 31332..32954 1 NC_012963.1 cysteine transporter 32954 8197951 PAS_chr1-3_0017 Pichia pastoris GS115 cysteine transporter XP_002489353.1 31332 D 644223 CDS PAS_chr1-3_0018 254564487 8197952 complement(33147..35351) 1 NC_012963.1 hypothetical protein 35351 8197952 PAS_chr1-3_0018 Pichia pastoris GS115 hypothetical protein XP_002489354.1 33147 R 644223 CDS PAS_chr1-3_0020 254564489 8197953 36296..37459 1 NC_012963.1 hypothetical protein 37459 8197953 PAS_chr1-3_0020 Pichia pastoris GS115 hypothetical protein XP_002489355.1 36296 D 644223 CDS PAS_chr1-3_0290 254564491 8197954 37818..38126 1 NC_012963.1 hypothetical protein 38126 8197954 PAS_chr1-3_0290 Pichia pastoris GS115 hypothetical protein XP_002489356.1 37818 D 644223 CDS PAS_chr1-3_0021 254564493 8196819 complement(38765..38980) 1 NC_012963.1 hypothetical protein 38980 8196819 PAS_chr1-3_0021 Pichia pastoris GS115 hypothetical protein XP_002489357.1 38765 R 644223 CDS PAS_chr1-3_0022 254564495 8197955 39526..42300 1 NC_012963.1 Transportin, cytosolic karyopherin beta 2 42300 8197955 PAS_chr1-3_0022 Pichia pastoris GS115 Transportin, cytosolic karyopherin beta 2 XP_002489358.1 39526 D 644223 CDS PAS_chr1-3_0023 254564497 8197956 complement(42367..44352) 1 NC_012963.1 allantoinase 44352 8197956 PAS_chr1-3_0023 Pichia pastoris GS115 allantoinase XP_002489359.1 42367 R 644223 CDS PAS_chr1-3_0024 254564499 8197957 45316..46830 1 NC_012963.1 succinate semialdehyde dehydrogenase 46830 8197957 PAS_chr1-3_0024 Pichia pastoris GS115 succinate semialdehyde dehydrogenase XP_002489360.1 45316 D 644223 CDS PAS_chr1-3_0025 254564501 8197958 47056..48600 1 NC_012963.1 strand exchange protein 48600 8197958 PAS_chr1-3_0025 Pichia pastoris GS115 strand exchange protein XP_002489361.1 47056 D 644223 CDS PAS_chr1-3_0026 254564503 8197959 complement(48593..49582) 1 NC_012963.1 negative regulator of RNA polymerase III 49582 8197959 PAS_chr1-3_0026 Pichia pastoris GS115 negative regulator of RNA polymerase III XP_002489362.1 48593 R 644223 CDS PAS_chr1-3_0027 254564505 8197960 50361..53057 1 NC_012963.1 hypothetical protein 53057 8197960 PAS_chr1-3_0027 Pichia pastoris GS115 hypothetical protein XP_002489363.1 50361 D 644223 CDS PAS_chr1-3_0028 254564507 8197961 53292..54152 1 NC_012963.1 Cytoplasmic inorganic pyrophosphatase (PPase) 54152 8197961 PAS_chr1-3_0028 Pichia pastoris GS115 Cytoplasmic inorganic pyrophosphatase (PPase) XP_002489364.1 53292 D 644223 CDS PAS_chr1-3_0029 254564509 8197962 complement(54199..54912) 1 NC_012963.1 phosphoribosylanthranilate isomerase 54912 8197962 PAS_chr1-3_0029 Pichia pastoris GS115 phosphoribosylanthranilate isomerase XP_002489365.1 54199 R 644223 CDS PAS_chr1-3_0030 254564511 8197963 55032..56006 1 NC_012963.1 replication factor C subunit 56006 8197963 PAS_chr1-3_0030 Pichia pastoris GS115 replication factor C subunit XP_002489366.1 55032 D 644223 CDS PAS_chr1-3_0031 254564513 8197964 56117..57874 1 NC_012963.1 Golgi-associated retrograde protein 57874 8197964 PAS_chr1-3_0031 Pichia pastoris GS115 Golgi-associated retrograde protein XP_002489367.1 56117 D 644223 CDS PAS_chr1-3_0032 254564515 8197965 complement(57876..59597) 1 NC_012963.1 EH domain-containing protein 59597 8197965 PAS_chr1-3_0032 Pichia pastoris GS115 EH domain-containing protein XP_002489368.1 57876 R 644223 CDS PAS_chr1-3_0033 254564517 8197966 59902..60933 1 NC_012963.1 Nuclear SAM-dependent mono-and asymmetric arginine dimethylating methyltransferase 60933 8197966 PAS_chr1-3_0033 Pichia pastoris GS115 Nuclear SAM-dependent mono-and asymmetric arginine dimethylating methyltransferase XP_002489369.1 59902 D 644223 CDS PAS_chr1-3_0034 254564519 8197347 complement(61003..62022) 1 NC_012963.1 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl4Ap 62022 8197347 PAS_chr1-3_0034 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl4Ap XP_002489370.1 61003 R 644223 CDS PAS_chr1-3_0036 254564521 8197348 64773..66368 1 NC_012963.1 hypothetical protein 66368 8197348 PAS_chr1-3_0036 Pichia pastoris GS115 hypothetical protein XP_002489371.1 64773 D 644223 CDS PAS_chr1-3_0037 254564523 8197349 complement(66404..69256) 1 NC_012963.1 Defining member of the SET3 histone deacetylase complex 69256 8197349 PAS_chr1-3_0037 Pichia pastoris GS115 Defining member of the SET3 histone deacetylase complex XP_002489372.1 66404 R 644223 CDS PAS_chr1-3_0038 254564525 8197350 join(69612..69614,69680..70063) 1 NC_012963.1 Constituent of the mitochondrial import motor associated with the presequence translocase 70063 8197350 PAS_chr1-3_0038 Pichia pastoris GS115 Constituent of the mitochondrial import motor associated with the presequence translocase XP_002489373.1 69612 D 644223 CDS PAS_chr1-3_0039 254564527 8197351 complement(join(70518..71530,71585..71642)) 1 NC_012963.1 hypothetical protein 71642 8197351 PAS_chr1-3_0039 Pichia pastoris GS115 hypothetical protein XP_002489374.1 70518 R 644223 CDS PAS_chr1-3_0040 254564529 8197352 71803..73392 1 NC_012963.1 hypothetical protein 73392 8197352 PAS_chr1-3_0040 Pichia pastoris GS115 hypothetical protein XP_002489375.1 71803 D 644223 CDS PAS_chr1-3_0041 254564531 8197353 complement(73492..75627) 1 NC_012963.1 serine/threonine protein kinase 75627 8197353 PAS_chr1-3_0041 Pichia pastoris GS115 serine/threonine protein kinase XP_002489376.1 73492 R 644223 CDS PAS_chr1-3_0043 254564533 8197354 77297..80173 1 NC_012963.1 Pheromone-regulated protein, predicted to have 5 transmembrane segments 80173 8197354 PAS_chr1-3_0043 Pichia pastoris GS115 Pheromone-regulated protein, predicted to have 5 transmembrane segments XP_002489377.1 77297 D 644223 CDS PAS_chr1-3_0044 254564535 8197355 80453..83500 1 NC_012963.1 Pheromone-regulated protein, predicted to have 5 transmembrane segments 83500 8197355 PAS_chr1-3_0044 Pichia pastoris GS115 Pheromone-regulated protein, predicted to have 5 transmembrane segments XP_002489378.1 80453 D 644223 CDS PAS_chr1-3_0045 254564537 8197356 83814..86840 1 NC_012963.1 Essential RNA-binding G protein effector of mating response pathway 86840 8197356 PAS_chr1-3_0045 Pichia pastoris GS115 Essential RNA-binding G protein effector of mating response pathway XP_002489379.1 83814 D 644223 CDS PAS_chr1-3_0046 254564539 8197357 87090..88757 1 NC_012963.1 hypothetical protein 88757 8197357 PAS_chr1-3_0046 Pichia pastoris GS115 hypothetical protein XP_002489380.1 87090 D 644223 CDS PAS_chr1-3_0047 254564541 8197358 complement(88830..90017) 1 NC_012963.1 hypothetical protein 90017 8197358 PAS_chr1-3_0047 Pichia pastoris GS115 hypothetical protein XP_002489381.1 88830 R 644223 CDS PAS_chr1-3_0048 254564543 8197359 91088..91795 1 NC_012963.1 Ubiquitin-conjugating enzyme (E2) and catalytic subunit of SCF ubiquitin-protein ligase complex 91795 8197359 PAS_chr1-3_0048 Pichia pastoris GS115 Ubiquitin-conjugating enzyme (E2) and catalytic subunit of SCF ubiquitin-protein ligase complex XP_002489382.1 91088 D 644223 CDS PAS_chr1-3_0049 254564545 8197360 complement(91915..92379) 1 NC_012963.1 hypothetical protein 92379 8197360 PAS_chr1-3_0049 Pichia pastoris GS115 hypothetical protein XP_002489383.1 91915 R 644223 CDS PAS_chr1-3_0050 254564547 8197361 92691..94187 1 NC_012963.1 Regulatory subunit of Cdc7p-Dbf4p kinase complex 94187 8197361 PAS_chr1-3_0050 Pichia pastoris GS115 Regulatory subunit of Cdc7p-Dbf4p kinase complex XP_002489384.1 92691 D 644223 CDS PAS_chr1-3_0051 254564549 8197362 complement(94332..94856) 1 NC_012963.1 hypothetical protein 94856 8197362 PAS_chr1-3_0051 Pichia pastoris GS115 hypothetical protein XP_002489385.1 94332 R 644223 CDS PAS_chr1-3_0052 254564551 8197363 complement(95232..96422) 1 NC_012963.1 Biotin synthase, catalyzes the conversion of dethiobiotin to biotin 96422 8197363 PAS_chr1-3_0052 Pichia pastoris GS115 Biotin synthase, catalyzes the conversion of dethiobiotin to biotin XP_002489386.1 95232 R 644223 CDS PAS_chr1-3_0053 254564553 8197364 complement(97347..98426) 1 NC_012963.1 Conserved peptide N-glycanase required for deglycosylation of misfolded glycoproteins 98426 8197364 PAS_chr1-3_0053 Pichia pastoris GS115 Conserved peptide N-glycanase required for deglycosylation of misfolded glycoproteins XP_002489387.1 97347 R 644223 CDS PAS_chr1-3_0291 254564555 8197365 98760..100043 1 NC_012963.1 hypothetical protein 100043 8197365 PAS_chr1-3_0291 Pichia pastoris GS115 hypothetical protein XP_002489388.1 98760 D 644223 CDS PAS_chr1-3_0292 254564557 8196820 100199..100483 1 NC_012963.1 hypothetical protein 100483 8196820 PAS_chr1-3_0292 Pichia pastoris GS115 hypothetical protein XP_002489389.1 100199 D 644223 CDS PAS_chr1-3_0054 254564559 8196821 100843..103344 1 NC_012963.1 Phosphatase subunit of the trehalose-6-phosphate synthase/phosphatase complex 103344 8196821 PAS_chr1-3_0054 Pichia pastoris GS115 Phosphatase subunit of the trehalose-6-phosphate synthase/phosphatase complex XP_002489390.1 100843 D 644223 CDS PAS_chr1-3_0055 254564561 8197366 103456..105018 1 NC_012963.1 Class II abasic (AP) endonuclease involved in repair of DNA damage 105018 8197366 PAS_chr1-3_0055 Pichia pastoris GS115 Class II abasic (AP) endonuclease involved in repair of DNA damage XP_002489391.1 103456 D 644223 CDS PAS_chr1-3_0056 254564563 8197367 105118..105501 1 NC_012963.1 hypothetical protein 105501 8197367 PAS_chr1-3_0056 Pichia pastoris GS115 hypothetical protein XP_002489392.1 105118 D 644223 CDS PAS_chr1-3_0057 254564565 8197368 complement(join(105594..106460,106535..106537)) 1 NC_012963.1 Component of both the Nup84 nuclear pore sub-complex and of the COPII complex 106537 8197368 PAS_chr1-3_0057 Pichia pastoris GS115 Component of both the Nup84 nuclear pore sub-complex and of the COPII complex XP_002489393.1 105594 R 644223 CDS PAS_chr1-3_0058 254564567 8197369 106689..107534 1 NC_012963.1 hypothetical protein 107534 8197369 PAS_chr1-3_0058 Pichia pastoris GS115 hypothetical protein XP_002489394.1 106689 D 644223 CDS PAS_chr1-3_0059 254564569 8197370 join(108281..109009,109048..110061) 1 NC_012963.1 Uracil permease, localized to the plasma membrane 110061 8197370 PAS_chr1-3_0059 Pichia pastoris GS115 Uracil permease, localized to the plasma membrane XP_002489395.1 108281 D 644223 CDS PAS_chr1-3_0293 254564571 8197371 110287..112197 1 NC_012963.1 hypothetical protein 112197 8197371 PAS_chr1-3_0293 Pichia pastoris GS115 hypothetical protein XP_002489396.1 110287 D 644223 CDS PAS_chr1-3_0061 254564573 8196822 112860..115268 1 NC_012963.1 Phosphotyrosine-specific protein phosphatase 115268 8196822 PAS_chr1-3_0061 Pichia pastoris GS115 Phosphotyrosine-specific protein phosphatase XP_002489397.1 112860 D 644223 CDS PAS_chr1-3_0062 254564575 8197372 complement(115336..115623) 1 NC_012963.1 Integral membrane protein required for ER to Golgi transport 115623 8197372 PAS_chr1-3_0062 Pichia pastoris GS115 Integral membrane protein required for ER to Golgi transport XP_002489398.1 115336 R 644223 CDS PAS_chr1-3_0063 254564577 8197373 complement(115746..118430) 1 NC_012963.1 Molecular chaperone of the endoplasmic reticulum lumen 118430 8197373 PAS_chr1-3_0063 Pichia pastoris GS115 Molecular chaperone of the endoplasmic reticulum lumen XP_002489399.1 115746 R 644223 CDS PAS_chr1-3_0064 254564579 8197374 118586..120469 1 NC_012963.1 hypothetical protein 120469 8197374 PAS_chr1-3_0064 Pichia pastoris GS115 hypothetical protein XP_002489400.1 118586 D 644223 CDS PAS_chr1-3_0065 254564581 8197375 complement(120474..121475) 1 NC_012963.1 Mitotic exit network regulator, forms GTPase-activating Bfa1p-Bub2p complex 121475 8197375 PAS_chr1-3_0065 Pichia pastoris GS115 Mitotic exit network regulator, forms GTPase-activating Bfa1p-Bub2p complex XP_002489401.1 120474 R 644223 CDS PAS_chr1-3_0066 254564583 8197376 complement(join(121654..124193,124256..124280)) 1 NC_012963.1 Subunit a of vacuolar-ATPase V0 domain, one of two isoforms (Vph1p and Stv1p) 124280 8197376 PAS_chr1-3_0066 Pichia pastoris GS115 Subunit a of vacuolar-ATPase V0 domain, one of two isoforms (Vph1p and Stv1p) XP_002489402.1 121654 R 644223 CDS PAS_chr1-3_0067 254564585 8197377 join(124543..125169,125232..126299) 1 NC_012963.1 Subunit of a Golgi membrane exchange factor (Ric1p-Rgp1p) that catalyzes nucleotide exchange on Ypt6 126299 8197377 PAS_chr1-3_0067 Pichia pastoris GS115 Subunit of a Golgi membrane exchange factor (Ric1p-Rgp1p) that catalyzes nucleotide exchange on Ypt6 XP_002489403.1 124543 D 644223 CDS PAS_chr1-3_0068 254564587 8197378 complement(126349..127287) 1 NC_012963.1 Conserved ribosomal protein P0 similar to rat P0, human P0, and E. coli L10e 127287 8197378 PAS_chr1-3_0068 Pichia pastoris GS115 Conserved ribosomal protein P0 similar to rat P0, human P0, and E. coli L10e XP_002489404.1 126349 R 644223 CDS PAS_chr1-3_0069 254564589 8197379 127871..130462 1 NC_012963.1 hypothetical protein 130462 8197379 PAS_chr1-3_0069 Pichia pastoris GS115 hypothetical protein XP_002489405.1 127871 D 644223 CDS PAS_chr1-3_0070 254564591 8197380 130831..131703 1 NC_012963.1 Mitochondrial inorganic pyrophosphatase 131703 8197380 PAS_chr1-3_0070 Pichia pastoris GS115 Mitochondrial inorganic pyrophosphatase XP_002489406.1 130831 D 644223 CDS PAS_chr1-3_0071 254564593 8197381 132095..136741 1 NC_012963.1 Subunit of the nuclear pore complex (NPC) 136741 8197381 PAS_chr1-3_0071 Pichia pastoris GS115 Subunit of the nuclear pore complex (NPC) XP_002489407.1 132095 D 644223 CDS PAS_chr1-3_0072 254564595 8197382 complement(136764..139361) 1 NC_012963.1 Splicing factor that reanneals U4 and U6 snRNPs during spliceosome recycling 139361 8197382 PAS_chr1-3_0072 Pichia pastoris GS115 Splicing factor that reanneals U4 and U6 snRNPs during spliceosome recycling XP_002489408.1 136764 R 644223 CDS PAS_chr1-3_0073 254564597 8197383 139578..140063 1 NC_012963.1 hypothetical protein 140063 8197383 PAS_chr1-3_0073 Pichia pastoris GS115 hypothetical protein XP_002489409.1 139578 D 644223 CDS PAS_chr1-3_0074 254564599 8197384 join(140637..140646,140744..142182) 1 NC_012963.1 Cytoplasmic ATP-dependent RNA helicase of the DEAD-box family 142182 8197384 PAS_chr1-3_0074 Pichia pastoris GS115 Cytoplasmic ATP-dependent RNA helicase of the DEAD-box family XP_002489410.1 140637 D 644223 CDS PAS_chr1-3_0075 254564601 8197385 join(142625..142661,142719..142855) 1 NC_012963.1 hypothetical protein 142855 8197385 PAS_chr1-3_0075 Pichia pastoris GS115 hypothetical protein XP_002489411.1 142625 D 644223 CDS PAS_chr1-3_0076 254564603 8197386 complement(143053..143220) 1 NC_012963.1 hypothetical protein 143220 8197386 PAS_chr1-3_0076 Pichia pastoris GS115 hypothetical protein XP_002489412.1 143053 R 644223 CDS PAS_chr1-3_0077 254564605 8197387 join(143548..143581,143666..144219) 1 NC_012963.1 hypothetical protein 144219 8197387 PAS_chr1-3_0077 Pichia pastoris GS115 hypothetical protein XP_002489413.1 143548 D 644223 CDS PAS_chr1-3_0294 254564607 8197388 complement(join(144273..145317,145376..145461)) 1 NC_012963.1 hypothetical protein 145461 8197388 PAS_chr1-3_0294 Pichia pastoris GS115 hypothetical protein XP_002489414.1 144273 R 644223 CDS PAS_chr1-3_0078 254564609 8196823 complement(145989..147617) 1 NC_012963.1 S-adenosyl-L-methionine uroporphyrinogen III transmethylase 147617 8196823 PAS_chr1-3_0078 Pichia pastoris GS115 S-adenosyl-L-methionine uroporphyrinogen III transmethylase XP_002489415.1 145989 R 644223 CDS PAS_chr1-3_0079 254564611 8197389 147888..149204 1 NC_012963.1 Nuclear protein that inhibits replication of Brome mosaic virus in S. cerevisiae 149204 8197389 PAS_chr1-3_0079 Pichia pastoris GS115 Nuclear protein that inhibits replication of Brome mosaic virus in S. cerevisiae XP_002489416.1 147888 D 644223 CDS PAS_chr1-3_0080 254564613 8197390 join(149341..149400,149462..149974) 1 NC_012963.1 Hydrophilic protein that acts in conjunction with SNARE proteins 149974 8197390 PAS_chr1-3_0080 Pichia pastoris GS115 Hydrophilic protein that acts in conjunction with SNARE proteins XP_002489417.1 149341 D 644223 CDS PAS_chr1-3_0081 254564615 8197391 complement(150025..152073) 1 NC_012963.1 Glycerol-3-phosphate/dihydroxyacetone phosphate dual substrate-specific sn-1 acyltransferase 152073 8197391 PAS_chr1-3_0081 Pichia pastoris GS115 Glycerol-3-phosphate/dihydroxyacetone phosphate dual substrate-specific sn-1 acyltransferase XP_002489418.1 150025 R 644223 CDS PAS_chr1-3_0082 254564617 8197392 complement(152732..153763) 1 NC_012963.1 Integral membrane protein 153763 8197392 PAS_chr1-3_0082 Pichia pastoris GS115 Integral membrane protein XP_002489419.1 152732 R 644223 CDS PAS_chr1-3_0083 254564619 8197393 154035..160655 1 NC_012963.1 Catalytic subunit of DNA polymerase (II) epsilon 160655 8197393 PAS_chr1-3_0083 Pichia pastoris GS115 Catalytic subunit of DNA polymerase (II) epsilon XP_002489420.1 154035 D 644223 CDS PAS_chr1-3_0084 254564621 8197394 160810..162201 1 NC_012963.1 Subunit of the origin recognition complex 162201 8197394 PAS_chr1-3_0084 Pichia pastoris GS115 Subunit of the origin recognition complex XP_002489421.1 160810 D 644223 CDS PAS_chr1-3_0295 254564623 8197395 complement(162207..162644) 1 NC_012963.1 hypothetical protein 162644 8197395 PAS_chr1-3_0295 Pichia pastoris GS115 hypothetical protein XP_002489422.1 162207 R 644223 CDS PAS_chr1-3_0085 254564625 8196824 162735..163640 1 NC_012963.1 hypothetical protein 163640 8196824 PAS_chr1-3_0085 Pichia pastoris GS115 hypothetical protein XP_002489423.1 162735 D 644223 CDS PAS_chr1-3_0086 254564627 8197396 163919..165469 1 NC_012963.1 hypothetical protein 165469 8197396 PAS_chr1-3_0086 Pichia pastoris GS115 hypothetical protein XP_002489424.1 163919 D 644223 CDS PAS_chr1-3_0087 254564629 8197397 complement(join(165520..165698,165756..165801)) 1 NC_012963.1 hypothetical protein 165801 8197397 PAS_chr1-3_0087 Pichia pastoris GS115 hypothetical protein XP_002489425.1 165520 R 644223 CDS PAS_chr1-3_0088 254564631 8197398 complement(165932..168136) 1 NC_012963.1 hypothetical protein 168136 8197398 PAS_chr1-3_0088 Pichia pastoris GS115 hypothetical protein XP_002489426.1 165932 R 644223 CDS PAS_chr1-3_0089 254564633 8197399 168844..169668 1 NC_012963.1 Protein chaperone involved in regulation of the HSP90 and HSP70 functions 169668 8197399 PAS_chr1-3_0089 Pichia pastoris GS115 Protein chaperone involved in regulation of the HSP90 and HSP70 functions XP_002489427.1 168844 D 644223 CDS PAS_chr1-3_0090 254564635 8197400 complement(169854..170465) 1 NC_012963.1 Subunit of the N-terminal acetyltransferase NatA (Nat1p, Ard1p, Nat5p) 170465 8197400 PAS_chr1-3_0090 Pichia pastoris GS115 Subunit of the N-terminal acetyltransferase NatA (Nat1p, Ard1p, Nat5p) XP_002489428.1 169854 R 644223 CDS PAS_chr1-3_0091 254564637 8197401 170783..171502 1 NC_012963.1 One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi 171502 8197401 PAS_chr1-3_0091 Pichia pastoris GS115 One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi XP_002489429.1 170783 D 644223 CDS PAS_chr1-3_0296 254564639 8197402 172250..173629 1 NC_012963.1 hypothetical protein 173629 8197402 PAS_chr1-3_0296 Pichia pastoris GS115 hypothetical protein XP_002489430.1 172250 D 644223 CDS PAS_chr1-3_0092 254564641 8196825 173743..174351 1 NC_012963.1 hypothetical protein 174351 8196825 PAS_chr1-3_0092 Pichia pastoris GS115 hypothetical protein XP_002489431.1 173743 D 644223 CDS PAS_chr1-3_0093 254564643 8197403 complement(174395..176539) 1 NC_012963.1 phospholipase 176539 8197403 PAS_chr1-3_0093 Pichia pastoris GS115 phospholipase XP_002489432.1 174395 R 644223 CDS PAS_chr1-3_0297 254564645 8197404 complement(176666..177124) 1 NC_012963.1 hypothetical protein 177124 8197404 PAS_chr1-3_0297 Pichia pastoris GS115 hypothetical protein XP_002489433.1 176666 R 644223 CDS PAS_chr1-3_0094 254564647 8196826 complement(177343..178668) 1 NC_012963.1 Dihydrolipoyl transsuccinylase, component of the mitochondrial alpha-ketoglutarate dehydrogenase 178668 8196826 PAS_chr1-3_0094 Pichia pastoris GS115 Dihydrolipoyl transsuccinylase, component of the mitochondrial alpha-ketoglutarate dehydrogenase XP_002489434.1 177343 R 644223 CDS PAS_chr1-3_0095 254564649 8197405 178973..179668 1 NC_012963.1 hypothetical protein 179668 8197405 PAS_chr1-3_0095 Pichia pastoris GS115 hypothetical protein XP_002489435.1 178973 D 644223 CDS PAS_chr1-3_0096 254564651 8197406 179885..180232 1 NC_012963.1 hypothetical protein 180232 8197406 PAS_chr1-3_0096 Pichia pastoris GS115 hypothetical protein XP_002489436.1 179885 D 644223 CDS PAS_chr1-3_0097 254564653 8197407 complement(180337..181218) 1 NC_012963.1 hypothetical protein 181218 8197407 PAS_chr1-3_0097 Pichia pastoris GS115 hypothetical protein XP_002489437.1 180337 R 644223 CDS PAS_chr1-3_0098 254564655 8197408 complement(181424..184027) 1 NC_012963.1 DNA binding component of the SBF complex (Swi4p-Swi6p), a transcriptional activator 184027 8197408 PAS_chr1-3_0098 Pichia pastoris GS115 DNA binding component of the SBF complex (Swi4p-Swi6p), a transcriptional activator XP_002489438.1 181424 R 644223 CDS PAS_chr1-3_0298 254564657 8197409 184470..185345 1 NC_012963.1 hypothetical protein 185345 8197409 PAS_chr1-3_0298 Pichia pastoris GS115 hypothetical protein XP_002489439.1 184470 D 644223 CDS PAS_chr1-3_0099 254564659 8196827 185647..187506 1 NC_012963.1 Transcription factor that activates transcription of genes 187506 8196827 PAS_chr1-3_0099 Pichia pastoris GS115 Transcription factor that activates transcription of genes XP_002489440.1 185647 D 644223 CDS PAS_chr1-3_0100 254564661 8197410 complement(join(187594..193093,193156..193169)) 1 NC_012963.1 Phosphatidylinositol-4-kinase that functions in the Pkc1p protein kinase pathway 193169 8197410 PAS_chr1-3_0100 Pichia pastoris GS115 Phosphatidylinositol-4-kinase that functions in the Pkc1p protein kinase pathway XP_002489441.1 187594 R 644223 CDS PAS_chr1-3_0101 254564663 8197411 complement(join(193424..194143,194213..194230)) 1 NC_012963.1 Constituent of 66S pre-ribosomal particles, has similarity to human translation initiation factor 6 194230 8197411 PAS_chr1-3_0101 Pichia pastoris GS115 Constituent of 66S pre-ribosomal particles, has similarity to human translation initiation factor 6 XP_002489442.1 193424 R 644223 CDS PAS_chr1-3_0102 254564665 8197412 complement(194413..197124) 1 NC_012963.1 Heat shock protein that cooperates with Ydj1p (Hsp40) and Ssa1p (Hsp70) 197124 8197412 PAS_chr1-3_0102 Pichia pastoris GS115 Heat shock protein that cooperates with Ydj1p (Hsp40) and Ssa1p (Hsp70) XP_002489443.1 194413 R 644223 CDS PAS_chr1-3_0104 254564667 8197413 198799..201141 1 NC_012963.1 Aconitase, required for the tricarboxylic acid (TCA) cycle and also independently required for mitoc 201141 8197413 PAS_chr1-3_0104 Pichia pastoris GS115 Aconitase, required for the tricarboxylic acid (TCA) cycle and also independently required for mitoc XP_002489444.1 198799 D 644223 CDS PAS_chr1-3_0299 254564669 8197414 join(201485..201710,201743..203490) 1 NC_012963.1 hypothetical protein 203490 8197414 PAS_chr1-3_0299 Pichia pastoris GS115 hypothetical protein XP_002489445.1 201485 D 644223 CDS PAS_chr1-3_0105 254564671 8196828 203763..205481 1 NC_012963.1 Catalytic subunit of the COP9 signalosome (CSN) complex 205481 8196828 PAS_chr1-3_0105 Pichia pastoris GS115 Catalytic subunit of the COP9 signalosome (CSN) complex XP_002489446.1 203763 D 644223 CDS PAS_chr1-3_0106 254564673 8197415 205797..207935 1 NC_012963.1 Protein kinase 207935 8197415 PAS_chr1-3_0106 Pichia pastoris GS115 Protein kinase XP_002489447.1 205797 D 644223 CDS PAS_chr1-3_0107 254564675 8197416 complement(208001..208438) 1 NC_012963.1 Mitochondrial ribosomal protein of the large subunit 208438 8197416 PAS_chr1-3_0107 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002489448.1 208001 R 644223 CDS PAS_chr1-3_0108 254564677 8197417 complement(208598..210637) 1 NC_012963.1 Ubiquitin-specific protease that deubiquitinates ubiquitin-protein moieties 210637 8197417 PAS_chr1-3_0108 Pichia pastoris GS115 Ubiquitin-specific protease that deubiquitinates ubiquitin-protein moieties XP_002489449.1 208598 R 644223 CDS PAS_chr1-3_0109 254564679 8197418 complement(210784..212109) 1 NC_012963.1 Putative oxidoreductase 212109 8197418 PAS_chr1-3_0109 Pichia pastoris GS115 Putative oxidoreductase XP_002489450.1 210784 R 644223 CDS PAS_chr1-3_0110 254564681 8197419 212238..213680 1 NC_012963.1 Essential component of the Rix1 complex (Rix1p, Ipi1p, Ipi3p) 213680 8197419 PAS_chr1-3_0110 Pichia pastoris GS115 Essential component of the Rix1 complex (Rix1p, Ipi1p, Ipi3p) XP_002489451.1 212238 D 644223 CDS PAS_chr1-3_0111 254564683 8197420 complement(213708..214097) 1 NC_012963.1 hypothetical protein 214097 8197420 PAS_chr1-3_0111 Pichia pastoris GS115 hypothetical protein XP_002489452.1 213708 R 644223 CDS PAS_chr1-3_0112 254564685 8197421 214185..214829 1 NC_012963.1 Putative RNA-binding protein implicated in ribosome biogenesis 214829 8197421 PAS_chr1-3_0112 Pichia pastoris GS115 Putative RNA-binding protein implicated in ribosome biogenesis XP_002489453.1 214185 D 644223 CDS PAS_chr1-3_0113 254564687 8197422 complement(214954..215715) 1 NC_012963.1 Small rho-like GTPase, essential for establishment and maintenance of cell polarity 215715 8197422 PAS_chr1-3_0113 Pichia pastoris GS115 Small rho-like GTPase, essential for establishment and maintenance of cell polarity XP_002489454.1 214954 R 644223 CDS PAS_chr1-3_0114 254564689 8197423 join(217553..221643,221691..221934) 1 NC_012963.1 Protein required for beta-1,6 glucan biosynthesis 221934 8197423 PAS_chr1-3_0114 Pichia pastoris GS115 Protein required for beta-1,6 glucan biosynthesis XP_002489455.1 217553 D 644223 CDS PAS_chr1-3_0115 254564691 8197584 222375..223106 1 NC_012963.1 Protein component of the small (40S) ribosomal subunit 223106 8197584 PAS_chr1-3_0115 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002489456.1 222375 D 644223 CDS PAS_chr1-3_0116 254564693 8197585 join(223276..223327,223387..224018) 1 NC_012963.1 Endoplasmic reticulum packaging chaperone 224018 8197585 PAS_chr1-3_0116 Pichia pastoris GS115 Endoplasmic reticulum packaging chaperone XP_002489457.1 223276 D 644223 CDS PAS_chr1-3_0117 254564695 8197583 join(224173..224217,224283..224477) 1 NC_012963.1 hypothetical protein 224477 8197583 PAS_chr1-3_0117 Pichia pastoris GS115 hypothetical protein XP_002489458.1 224173 D 644223 CDS PAS_chr1-3_0118 254564697 8197586 complement(224540..225406) 1 NC_012963.1 Mitochondrial ribosomal protein of the large subunit 225406 8197586 PAS_chr1-3_0118 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002489459.1 224540 R 644223 CDS PAS_chr1-3_0119 254564699 8197587 225743..226312 1 NC_012963.1 hypothetical protein 226312 8197587 PAS_chr1-3_0119 Pichia pastoris GS115 hypothetical protein XP_002489460.1 225743 D 644223 CDS PAS_chr1-3_0120 254564701 8197588 complement(226504..227715) 1 NC_012963.1 hypothetical protein 227715 8197588 PAS_chr1-3_0120 Pichia pastoris GS115 hypothetical protein XP_002489461.1 226504 R 644223 CDS PAS_chr1-3_0121 254564703 8197589 complement(227926..229083) 1 NC_012963.1 hypothetical protein 229083 8197589 PAS_chr1-3_0121 Pichia pastoris GS115 hypothetical protein XP_002489462.1 227926 R 644223 CDS PAS_chr1-3_0122 254564705 8197590 229631..231142 1 NC_012963.1 UDP-glucose pyrophosphorylase (UGPase), catalyses the reversible formation of UDP-Glc 231142 8197590 PAS_chr1-3_0122 Pichia pastoris GS115 UDP-glucose pyrophosphorylase (UGPase), catalyses the reversible formation of UDP-Glc XP_002489463.1 229631 D 644223 CDS PAS_chr1-3_0123 254564707 8197591 complement(231199..232068) 1 NC_012963.1 hypothetical protein 232068 8197591 PAS_chr1-3_0123 Pichia pastoris GS115 hypothetical protein XP_002489464.1 231199 R 644223 CDS PAS_chr1-3_0124 254564709 8197592 232220..232510 1 NC_012963.1 Mitochondrial ribosomal protein of the large subunit 232510 8197592 PAS_chr1-3_0124 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002489465.1 232220 D 644223 CDS PAS_chr1-3_0125 254564711 8197593 complement(232600..233496) 1 NC_012963.1 Member of the protein disulfide isomerase (PDI) family 233496 8197593 PAS_chr1-3_0125 Pichia pastoris GS115 Member of the protein disulfide isomerase (PDI) family XP_002489466.1 232600 R 644223 CDS PAS_chr1-3_0126 254564713 8197594 233895..235595 1 NC_012963.1 Transcriptional activator of genes regulated by nitrogen catabolite repression (NCR) 235595 8197594 PAS_chr1-3_0126 Pichia pastoris GS115 Transcriptional activator of genes regulated by nitrogen catabolite repression (NCR) XP_002489467.1 233895 D 644223 CDS PAS_chr1-3_0127 254564715 8197595 235795..237021 1 NC_012963.1 hypothetical protein 237021 8197595 PAS_chr1-3_0127 Pichia pastoris GS115 hypothetical protein XP_002489468.1 235795 D 644223 CDS PAS_chr1-3_0128 254564717 8197596 237162..238673 1 NC_012963.1 Probable di-and tri-peptidase 238673 8197596 PAS_chr1-3_0128 Pichia pastoris GS115 Probable di-and tri-peptidase XP_002489469.1 237162 D 644223 CDS PAS_chr1-3_0129 254564719 8197597 238764..239690 1 NC_012963.1 hypothetical protein 239690 8197597 PAS_chr1-3_0129 Pichia pastoris GS115 hypothetical protein XP_002489470.1 238764 D 644223 CDS PAS_chr1-3_0130 254564721 8197598 239825..240685 1 NC_012963.1 Pyrimidine nucleotidase 240685 8197598 PAS_chr1-3_0130 Pichia pastoris GS115 Pyrimidine nucleotidase XP_002489471.1 239825 D 644223 CDS PAS_chr1-3_0131 254564723 8197599 complement(240682..242094) 1 NC_012963.1 hypothetical protein 242094 8197599 PAS_chr1-3_0131 Pichia pastoris GS115 hypothetical protein XP_002489472.1 240682 R 644223 CDS PAS_chr1-3_0132 254564725 8197600 complement(242307..242726) 1 NC_012963.1 hypothetical protein 242726 8197600 PAS_chr1-3_0132 Pichia pastoris GS115 hypothetical protein XP_002489473.1 242307 R 644223 CDS PAS_chr1-3_0133 254564727 8197601 complement(243019..243594) 1 NC_012963.1 hypothetical protein 243594 8197601 PAS_chr1-3_0133 Pichia pastoris GS115 hypothetical protein XP_002489474.1 243019 R 644223 CDS PAS_chr1-3_0134 254564729 8197602 243974..244873 1 NC_012963.1 Type I membrane protein with a J domain is required to preserve the folding capacity of the ER 244873 8197602 PAS_chr1-3_0134 Pichia pastoris GS115 Type I membrane protein with a J domain is required to preserve the folding capacity of the ER XP_002489475.1 243974 D 644223 CDS PAS_chr1-3_0135 254564731 8197603 complement(244941..247916) 1 NC_012963.1 Protein that forms a complex with the Sit4p protein phosphatase 247916 8197603 PAS_chr1-3_0135 Pichia pastoris GS115 Protein that forms a complex with the Sit4p protein phosphatase XP_002489476.1 244941 R 644223 CDS PAS_chr1-3_0136 254564733 8197604 join(248240..248271,248334..250629) 1 NC_012963.1 hypothetical protein 250629 8197604 PAS_chr1-3_0136 Pichia pastoris GS115 hypothetical protein XP_002489477.1 248240 D 644223 CDS PAS_chr1-3_0137 254564735 8197605 complement(250709..251665) 1 NC_012963.1 Molecular chaperone 251665 8197605 PAS_chr1-3_0137 Pichia pastoris GS115 Molecular chaperone XP_002489478.1 250709 R 644223 CDS PAS_chr1-3_0138 254564737 8197606 join(251923..252530,252596..253193) 1 NC_012963.1 Alpha-1,2-mannosyltransferase involved in O-and N-linked protein glycosylation 253193 8197606 PAS_chr1-3_0138 Pichia pastoris GS115 Alpha-1,2-mannosyltransferase involved in O-and N-linked protein glycosylation XP_002489479.1 251923 D 644223 CDS PAS_chr1-3_0140 254564739 8197607 join(253340..253502,253560..253855) 1 NC_012963.1 Small subunit of the clathrin-associated adaptor complex AP-1 253855 8197607 PAS_chr1-3_0140 Pichia pastoris GS115 Small subunit of the clathrin-associated adaptor complex AP-1 XP_002489480.1 253340 D 644223 CDS PAS_chr1-3_0141 254564741 8197608 254890..256872 1 NC_012963.1 Protein with a role in cellular adhesion and filamentous growth 256872 8197608 PAS_chr1-3_0141 Pichia pastoris GS115 Protein with a role in cellular adhesion and filamentous growth XP_002489481.1 254890 D 644223 CDS PAS_chr1-3_0142 254564743 8197609 257076..257444 1 NC_012963.1 Lsm (Like Sm) protein 257444 8197609 PAS_chr1-3_0142 Pichia pastoris GS115 Lsm (Like Sm) protein XP_002489482.1 257076 D 644223 CDS PAS_chr1-3_0143 254564745 8197610 complement(join(257546..266187,266234..266264)) 1 NC_012963.1 Protein kinase primarily involved in telomere length regulation 266264 8197610 PAS_chr1-3_0143 Pichia pastoris GS115 Protein kinase primarily involved in telomere length regulation XP_002489483.1 257546 R 644223 CDS PAS_chr1-3_0300 254564747 8197611 complement(join(266471..266842,267106..267147)) 1 NC_012963.1 hypothetical protein 267147 8197611 PAS_chr1-3_0300 Pichia pastoris GS115 hypothetical protein XP_002489484.1 266471 R 644223 CDS PAS_chr1-3_0144 254564749 8196829 267473..268054 1 NC_012963.1 hypothetical protein 268054 8196829 PAS_chr1-3_0144 Pichia pastoris GS115 hypothetical protein XP_002489485.1 267473 D 644223 CDS PAS_chr1-3_0145 254564751 8197612 268252..268911 1 NC_012963.1 hypothetical protein 268911 8197612 PAS_chr1-3_0145 Pichia pastoris GS115 hypothetical protein XP_002489486.1 268252 D 644223 CDS PAS_chr1-3_0146 254564753 8197613 269012..270202 1 NC_012963.1 hypothetical protein 270202 8197613 PAS_chr1-3_0146 Pichia pastoris GS115 hypothetical protein XP_002489487.1 269012 D 644223 CDS PAS_chr1-3_0147 254564755 8197614 270532..273357 1 NC_012963.1 Protein implicated in polar growth, functionally redundant with Boi1p 273357 8197614 PAS_chr1-3_0147 Pichia pastoris GS115 Protein implicated in polar growth, functionally redundant with Boi1p XP_002489488.1 270532 D 644223 CDS PAS_chr1-3_0148 254564757 8197615 complement(273407..275488) 1 NC_012963.1 Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) 275488 8197615 PAS_chr1-3_0148 Pichia pastoris GS115 Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) XP_002489489.1 273407 R 644223 CDS PAS_chr1-3_0149 254564759 8197616 complement(join(275739..276101,276158..276616)) 1 NC_012963.1 Transmembrane osmosensor 276616 8197616 PAS_chr1-3_0149 Pichia pastoris GS115 Transmembrane osmosensor XP_002489490.1 275739 R 644223 CDS PAS_chr1-3_0150 254564761 8197617 join(276804..279923,280016..282331) 1 NC_012963.1 Ubiquitin-protein ligase (E3) 282331 8197617 PAS_chr1-3_0150 Pichia pastoris GS115 Ubiquitin-protein ligase (E3) XP_002489491.1 276804 D 644223 CDS PAS_chr1-3_0151 254564763 8197618 complement(join(282388..284993,285056..285638)) 1 NC_012963.1 Nucleolar protein required for normal metabolism of the rRNA primary transcript 285638 8197618 PAS_chr1-3_0151 Pichia pastoris GS115 Nucleolar protein required for normal metabolism of the rRNA primary transcript XP_002489492.1 282388 R 644223 CDS PAS_chr1-3_0152 254564765 8197619 286111..286944 1 NC_012963.1 hypothetical protein 286944 8197619 PAS_chr1-3_0152 Pichia pastoris GS115 hypothetical protein XP_002489493.1 286111 D 644223 CDS PAS_chr1-3_0153 254564767 8197620 complement(join(287291..288582,288663..288897)) 1 NC_012963.1 Plasma membrane pyridoxine (vitamin B6) transporter 288897 8197620 PAS_chr1-3_0153 Pichia pastoris GS115 Plasma membrane pyridoxine (vitamin B6) transporter XP_002489494.1 287291 R 644223 CDS PAS_chr1-3_0154 254564769 8197621 290046..291266 1 NC_012963.1 hypothetical protein 291266 8197621 PAS_chr1-3_0154 Pichia pastoris GS115 hypothetical protein XP_002489495.1 290046 D 644223 CDS PAS_chr1-3_0155 254564771 8197622 complement(291287..292912) 1 NC_012963.1 Putative RNA binding protein 292912 8197622 PAS_chr1-3_0155 Pichia pastoris GS115 Putative RNA binding protein XP_002489496.1 291287 R 644223 CDS PAS_chr1-3_0301 254564773 8197623 complement(293568..294752) 1 NC_012963.1 hypothetical protein 294752 8197623 PAS_chr1-3_0301 Pichia pastoris GS115 hypothetical protein XP_002489497.1 293568 R 644223 CDS PAS_chr1-3_0156 254564775 8196830 complement(294882..295748) 1 NC_012963.1 1-acyl-sn-gylcerol-3-phosphate acyltransferase 295748 8196830 PAS_chr1-3_0156 Pichia pastoris GS115 1-acyl-sn-gylcerol-3-phosphate acyltransferase XP_002489498.1 294882 R 644223 CDS PAS_chr1-3_0157 254564777 8197624 295970..296479 1 NC_012963.1 Subunit of the Dcp1p-Dcp2p decapping enzyme complex 296479 8197624 PAS_chr1-3_0157 Pichia pastoris GS115 Subunit of the Dcp1p-Dcp2p decapping enzyme complex XP_002489499.1 295970 D 644223 CDS PAS_chr1-3_0158 254564779 8197625 join(296677..296754,296809..296964) 1 NC_012963.1 hypothetical protein identified by homology 296964 8197625 PAS_chr1-3_0158 Pichia pastoris GS115 hypothetical protein identified by homology XP_002489500.1 296677 D 644223 CDS PAS_chr1-3_0159 254564781 8197626 complement(297025..299673) 1 NC_012963.1 GTPase-activating protein for the polarity-establishment protein Cdc42p 299673 8197626 PAS_chr1-3_0159 Pichia pastoris GS115 GTPase-activating protein for the polarity-establishment protein Cdc42p XP_002489501.1 297025 R 644223 CDS PAS_chr1-3_0160 254564783 8197627 300197..302074 1 NC_012963.1 hypothetical protein 302074 8197627 PAS_chr1-3_0160 Pichia pastoris GS115 hypothetical protein XP_002489502.1 300197 D 644223 CDS PAS_chr1-3_0161 254564785 8197628 complement(join(302251..302641,302712..302719)) 1 NC_012963.1 Type II membrane protein required for vesicular transport 302719 8197628 PAS_chr1-3_0161 Pichia pastoris GS115 Type II membrane protein required for vesicular transport XP_002489503.1 302251 R 644223 CDS PAS_chr1-3_0162 254564787 8197629 302957..303757 1 NC_012963.1 Highly conserved, iron-sulfur cluster binding protein localized in the cytoplasm 303757 8197629 PAS_chr1-3_0162 Pichia pastoris GS115 Highly conserved, iron-sulfur cluster binding protein localized in the cytoplasm XP_002489504.1 302957 D 644223 CDS PAS_chr1-3_0302 254564789 8197630 complement(303761..304339) 1 NC_012963.1 hypothetical protein 304339 8197630 PAS_chr1-3_0302 Pichia pastoris GS115 hypothetical protein XP_002489505.1 303761 R 644223 CDS PAS_chr1-3_0163 254564791 8196831 304872..305927 1 NC_012963.1 Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter 305927 8196831 PAS_chr1-3_0163 Pichia pastoris GS115 Uridine diphosphate-N-acetylglucosamine (UDP-GlcNAc) transporter XP_002489506.1 304872 D 644223 CDS PAS_chr1-3_0164 254564793 8197631 306287..307342 1 NC_012963.1 hypothetical protein 307342 8197631 PAS_chr1-3_0164 Pichia pastoris GS115 hypothetical protein XP_002489507.1 306287 D 644223 CDS PAS_chr1-3_0165 254564795 8197632 complement(307411..308442) 1 NC_012963.1 hypothetical protein 308442 8197632 PAS_chr1-3_0165 Pichia pastoris GS115 hypothetical protein XP_002489508.1 307411 R 644223 CDS PAS_chr1-3_0166 254564797 8197633 complement(309211..310680) 1 NC_012963.1 hypothetical protein 310680 8197633 PAS_chr1-3_0166 Pichia pastoris GS115 hypothetical protein XP_002489509.1 309211 R 644223 CDS PAS_chr1-3_0167 254564799 8197634 311162..313192 1 NC_012963.1 Protein with a role in 5'-end processing of mitochondrial RNAs 313192 8197634 PAS_chr1-3_0167 Pichia pastoris GS115 Protein with a role in 5'-end processing of mitochondrial RNAs XP_002489510.1 311162 D 644223 CDS PAS_chr1-3_0168 254564801 8197635 313396..318975 1 NC_012963.1 Peripheral membrane protein required for vesicle formation 318975 8197635 PAS_chr1-3_0168 Pichia pastoris GS115 Peripheral membrane protein required for vesicle formation XP_002489511.1 313396 D 644223 CDS PAS_chr1-3_0169 254564803 8197636 complement(319065..319877) 1 NC_012963.1 hypothetical protein 319877 8197636 PAS_chr1-3_0169 Pichia pastoris GS115 hypothetical protein XP_002489512.1 319065 R 644223 CDS PAS_chr1-3_0170 254564805 8197637 322529..323452 1 NC_012963.1 Zinc-finger DNA-binding protein 323452 8197637 PAS_chr1-3_0170 Pichia pastoris GS115 Zinc-finger DNA-binding protein XP_002489513.1 322529 D 644223 CDS PAS_chr1-3_0171 254564807 8197638 323627..324331 1 NC_012963.1 hypothetical protein 324331 8197638 PAS_chr1-3_0171 Pichia pastoris GS115 hypothetical protein XP_002489514.1 323627 D 644223 CDS PAS_chr1-3_0172 254564809 8197639 324475..324960 1 NC_012963.1 Subunit beta1 of the nascent polypeptide-associated complex (NAC) involved in protein targeting 324960 8197639 PAS_chr1-3_0172 Pichia pastoris GS115 Subunit beta1 of the nascent polypeptide-associated complex (NAC) involved in protein targeting XP_002489515.1 324475 D 644223 CDS PAS_chr1-3_0303 254564811 8197640 complement(325317..325787) 1 NC_012963.1 hypothetical protein 325787 8197640 PAS_chr1-3_0303 Pichia pastoris GS115 hypothetical protein XP_002489516.1 325317 R 644223 CDS PAS_chr1-3_0173 254564813 8196832 complement(326028..328487) 1 NC_012963.1 hypothetical protein 328487 8196832 PAS_chr1-3_0173 Pichia pastoris GS115 hypothetical protein XP_002489517.1 326028 R 644223 CDS PAS_chr1-3_0174 254564815 8197641 complement(329272..330336) 1 NC_012963.1 One of several homologs of bacterial chaperone DnaJ, located in the ER lumen 330336 8197641 PAS_chr1-3_0174 Pichia pastoris GS115 One of several homologs of bacterial chaperone DnaJ, located in the ER lumen XP_002489518.1 329272 R 644223 CDS PAS_chr1-3_0175 254564817 8197642 330636..331979 1 NC_012963.1 Essential protein involved in mtDNA inheritance 331979 8197642 PAS_chr1-3_0175 Pichia pastoris GS115 Essential protein involved in mtDNA inheritance XP_002489519.1 330636 D 644223 CDS PAS_chr1-3_0176 254564819 8197643 332103..332474 1 NC_012963.1 hypothetical protein 332474 8197643 PAS_chr1-3_0176 Pichia pastoris GS115 hypothetical protein XP_002489520.1 332103 D 644223 CDS PAS_chr1-3_0177 254564821 8197644 332778..333800 1 NC_012963.1 hypothetical protein 333800 8197644 PAS_chr1-3_0177 Pichia pastoris GS115 hypothetical protein XP_002489521.1 332778 D 644223 CDS PAS_chr1-3_0178 254564823 8197645 complement(333805..334314) 1 NC_012963.1 hypothetical protein 334314 8197645 PAS_chr1-3_0178 Pichia pastoris GS115 hypothetical protein XP_002489522.1 333805 R 644223 CDS PAS_chr1-3_0179 254564825 8197646 334505..334930 1 NC_012963.1 hypothetical protein 334930 8197646 PAS_chr1-3_0179 Pichia pastoris GS115 hypothetical protein XP_002489523.1 334505 D 644223 CDS PAS_chr1-3_0180 254564827 8197647 complement(335028..337223) 1 NC_012963.1 hypothetical protein 337223 8197647 PAS_chr1-3_0180 Pichia pastoris GS115 hypothetical protein XP_002489524.1 335028 R 644223 CDS PAS_chr1-3_0181 254564829 8197648 complement(337444..341799) 1 NC_012963.1 hypothetical protein 341799 8197648 PAS_chr1-3_0181 Pichia pastoris GS115 hypothetical protein XP_002489525.1 337444 R 644223 CDS PAS_chr1-3_0182 254564831 8197649 341956..343878 1 NC_012963.1 Essential splicing factor 343878 8197649 PAS_chr1-3_0182 Pichia pastoris GS115 Essential splicing factor XP_002489526.1 341956 D 644223 CDS PAS_chr1-3_0183 254564833 8197650 complement(343920..348086) 1 NC_012963.1 RNA-binding subunit of the mRNA cleavage and polyadenylation factor 348086 8197650 PAS_chr1-3_0183 Pichia pastoris GS115 RNA-binding subunit of the mRNA cleavage and polyadenylation factor XP_002489527.1 343920 R 644223 CDS PAS_chr1-3_0184 254564835 8197651 348309..350630 1 NC_012963.1 Protein involved in proteolytic activation of Rim101p in response to alkaline pH 350630 8197651 PAS_chr1-3_0184 Pichia pastoris GS115 Protein involved in proteolytic activation of Rim101p in response to alkaline pH XP_002489528.1 348309 D 644223 CDS PAS_chr1-3_0185 254564837 8197652 complement(350617..351984) 1 NC_012963.1 Delta 2-isopentenyl pyrophosphate:tRNA isopentenyl transferase 351984 8197652 PAS_chr1-3_0185 Pichia pastoris GS115 Delta 2-isopentenyl pyrophosphate:tRNA isopentenyl transferase XP_002489529.1 350617 R 644223 CDS PAS_chr1-3_0186 254564839 8197653 352171..353154 1 NC_012963.1 Putative protein, predicted to be an alpha-isopropylmalate carrier 353154 8197653 PAS_chr1-3_0186 Pichia pastoris GS115 Putative protein, predicted to be an alpha-isopropylmalate carrier XP_002489530.1 352171 D 644223 CDS PAS_chr1-3_0187 254564841 8197654 complement(join(353182..354348,354403..354477)) 1 NC_012963.1 Mevalonate kinase, acts in the biosynthesis of isoprenoids and sterols, including ergosterol 354477 8197654 PAS_chr1-3_0187 Pichia pastoris GS115 Mevalonate kinase, acts in the biosynthesis of isoprenoids and sterols, including ergosterol XP_002489531.1 353182 R 644223 CDS PAS_chr1-3_0188 254564843 8197655 354846..356198 1 NC_012963.1 Constituent of 66S pre-ribosomal particles, required for maturation of the large ribosomal subunit 356198 8197655 PAS_chr1-3_0188 Pichia pastoris GS115 Constituent of 66S pre-ribosomal particles, required for maturation of the large ribosomal subunit XP_002489532.1 354846 D 644223 CDS PAS_chr1-3_0189 254564845 8197656 complement(356233..357447) 1 NC_012963.1 hypothetical protein 357447 8197656 PAS_chr1-3_0189 Pichia pastoris GS115 hypothetical protein XP_002489533.1 356233 R 644223 CDS PAS_chr1-3_0190 254564847 8197657 357578..358006 1 NC_012963.1 hypothetical protein 358006 8197657 PAS_chr1-3_0190 Pichia pastoris GS115 hypothetical protein XP_002489534.1 357578 D 644223 CDS PAS_chr1-3_0191 254564849 8197658 complement(join(358071..359554,359594..359651)) 1 NC_012963.1 GMP synthase, an enzyme that catalyzes the second step in the biosynthesis of GMP from IMP 359651 8197658 PAS_chr1-3_0191 Pichia pastoris GS115 GMP synthase, an enzyme that catalyzes the second step in the biosynthesis of GMP from IMP XP_002489535.1 358071 R 644223 CDS PAS_chr1-3_0192 254564851 8197889 359951..360889 1 NC_012963.1 Alpha subunit of both the farnesyltransferase and type I geranylgeranyltransferase 360889 8197889 PAS_chr1-3_0192 Pichia pastoris GS115 Alpha subunit of both the farnesyltransferase and type I geranylgeranyltransferase XP_002489536.1 359951 D 644223 CDS PAS_chr1-3_0193 254564853 8196429 360974..361957 1 NC_012963.1 Protein phosphatase 361957 8196429 PAS_chr1-3_0193 Pichia pastoris GS115 Protein phosphatase XP_002489537.1 360974 D 644223 CDS PAS_chr1-3_0304 254564855 8196430 complement(361991..362797) 1 NC_012963.1 hypothetical protein 362797 8196430 PAS_chr1-3_0304 Pichia pastoris GS115 hypothetical protein XP_002489538.1 361991 R 644223 CDS PAS_chr1-3_0194 254564857 8196833 complement(363027..364304) 1 NC_012963.1 Heme A:farnesyltransferase 364304 8196833 PAS_chr1-3_0194 Pichia pastoris GS115 Heme A:farnesyltransferase XP_002489539.1 363027 R 644223 CDS PAS_chr1-3_0195 254564859 8196431 complement(364618..365625) 1 NC_012963.1 Essential, non-ATPase regulatory subunit of the 26S proteasome 365625 8196431 PAS_chr1-3_0195 Pichia pastoris GS115 Essential, non-ATPase regulatory subunit of the 26S proteasome XP_002489540.1 364618 R 644223 CDS PAS_chr1-3_0197 254564861 8196432 complement(367154..368302) 1 NC_012963.1 hypothetical protein 368302 8196432 PAS_chr1-3_0197 Pichia pastoris GS115 hypothetical protein XP_002489541.1 367154 R 644223 CDS PAS_chr1-3_0198 254564863 8196433 368486..370294 1 NC_012963.1 hypothetical protein 370294 8196433 PAS_chr1-3_0198 Pichia pastoris GS115 hypothetical protein XP_002489542.1 368486 D 644223 CDS PAS_chr1-3_0199 254564865 8196434 complement(370881..372110) 1 NC_012963.1 hypothetical protein 372110 8196434 PAS_chr1-3_0199 Pichia pastoris GS115 hypothetical protein XP_002489543.1 370881 R 644223 CDS PAS_chr1-3_0200 254564867 8196435 complement(372861..373796) 1 NC_012963.1 hypothetical protein 373796 8196435 PAS_chr1-3_0200 Pichia pastoris GS115 hypothetical protein XP_002489544.1 372861 R 644223 CDS PAS_chr1-3_0201 254564869 8196436 374601..376433 1 NC_012963.1 hypothetical protein 376433 8196436 PAS_chr1-3_0201 Pichia pastoris GS115 hypothetical protein XP_002489545.1 374601 D 644223 CDS PAS_chr1-3_0202 254564871 8196437 376933..378369 1 NC_012963.1 Essential subunit of Sec61 complex (Sec61p, Sbh1p, and Sss1p) 378369 8196437 PAS_chr1-3_0202 Pichia pastoris GS115 Essential subunit of Sec61 complex (Sec61p, Sbh1p, and Sss1p) XP_002489546.1 376933 D 644223 CDS PAS_chr1-3_0305 254564873 8196438 378490..378918 1 NC_012963.1 hypothetical protein 378918 8196438 PAS_chr1-3_0305 Pichia pastoris GS115 hypothetical protein XP_002489547.1 378490 D 644223 CDS PAS_chr1-3_0203 254564875 8196834 complement(378944..380332) 1 NC_012963.1 hypothetical protein 380332 8196834 PAS_chr1-3_0203 Pichia pastoris GS115 hypothetical protein XP_002489548.1 378944 R 644223 CDS PAS_chr1-3_0204 254564877 8196439 380877..382112 1 NC_012963.1 hypothetical protein 382112 8196439 PAS_chr1-3_0204 Pichia pastoris GS115 hypothetical protein XP_002489549.1 380877 D 644223 CDS PAS_chr1-3_0205 254564879 8196440 complement(382190..383221) 1 NC_012963.1 hypothetical protein 383221 8196440 PAS_chr1-3_0205 Pichia pastoris GS115 hypothetical protein XP_002489550.1 382190 R 644223 CDS PAS_chr1-3_0206 254564881 8196441 complement(383439..385151) 1 NC_012963.1 Permease of basic amino acids in the vacuolar membrane 385151 8196441 PAS_chr1-3_0206 Pichia pastoris GS115 Permease of basic amino acids in the vacuolar membrane XP_002489551.1 383439 R 644223 CDS PAS_chr1-3_0207 254564883 8196442 complement(385335..386378) 1 NC_012963.1 Essential protein involved in assembly of cytosolic and nuclear iron-sulfur proteins 386378 8196442 PAS_chr1-3_0207 Pichia pastoris GS115 Essential protein involved in assembly of cytosolic and nuclear iron-sulfur proteins XP_002489552.1 385335 R 644223 CDS PAS_chr1-3_0208 254564885 8196443 386517..388001 1 NC_012963.1 Mitochondrial peripheral inner membrane protein 388001 8196443 PAS_chr1-3_0208 Pichia pastoris GS115 Mitochondrial peripheral inner membrane protein XP_002489553.1 386517 D 644223 CDS PAS_chr1-3_0209 254564887 8196444 388190..389002 1 NC_012963.1 Target membrane receptor (t-SNARE) 389002 8196444 PAS_chr1-3_0209 Pichia pastoris GS115 Target membrane receptor (t-SNARE) XP_002489554.1 388190 D 644223 CDS PAS_chr1-3_0210 254564889 8196445 389319..389741 1 NC_012963.1 hypothetical protein 389741 8196445 PAS_chr1-3_0210 Pichia pastoris GS115 hypothetical protein XP_002489555.1 389319 D 644223 CDS PAS_chr1-3_0211 254564891 8196446 complement(389860..390987) 1 NC_012963.1 Deoxyhypusine synthase, catalyzes formation of deoxyhypusine 390987 8196446 PAS_chr1-3_0211 Pichia pastoris GS115 Deoxyhypusine synthase, catalyzes formation of deoxyhypusine XP_002489556.1 389860 R 644223 CDS PAS_chr1-3_0212 254564893 8196447 complement(391121..392590) 1 NC_012963.1 Lanosterol 14-alpha-demethylase 392590 8196447 PAS_chr1-3_0212 Pichia pastoris GS115 Lanosterol 14-alpha-demethylase XP_002489557.1 391121 R 644223 CDS PAS_chr1-3_0213 254564895 8196448 complement(392782..394197) 1 NC_012963.1 Protein kinase 394197 8196448 PAS_chr1-3_0213 Pichia pastoris GS115 Protein kinase XP_002489558.1 392782 R 644223 CDS PAS_chr1-3_0215 254564897 8196449 394737..396632 1 NC_012963.1 Polyamine transport protein specific for spermine 396632 8196449 PAS_chr1-3_0215 Pichia pastoris GS115 Polyamine transport protein specific for spermine XP_002489559.1 394737 D 644223 CDS PAS_chr1-3_0216 254564899 8196450 396823..399285 1 NC_012963.1 hypothetical protein 399285 8196450 PAS_chr1-3_0216 Pichia pastoris GS115 hypothetical protein XP_002489560.1 396823 D 644223 CDS PAS_chr1-3_0217 254564901 8196451 complement(399372..400175) 1 NC_012963.1 Protein involved in assembly of mitochondrial respiratory complexes 400175 8196451 PAS_chr1-3_0217 Pichia pastoris GS115 Protein involved in assembly of mitochondrial respiratory complexes XP_002489561.1 399372 R 644223 CDS PAS_chr1-3_0218 254564903 8196452 401261..402358 1 NC_012963.1 Probable catalytic subunit of a mannosylinositol phosphorylceramide (MIPC) synthase 402358 8196452 PAS_chr1-3_0218 Pichia pastoris GS115 Probable catalytic subunit of a mannosylinositol phosphorylceramide (MIPC) synthase XP_002489562.1 401261 D 644223 CDS PAS_chr1-3_0219 254564905 8196453 complement(402413..403903) 1 NC_012963.1 Cis-golgi GTPase-activating protein (GAP) 403903 8196453 PAS_chr1-3_0219 Pichia pastoris GS115 Cis-golgi GTPase-activating protein (GAP) XP_002489563.1 402413 R 644223 CDS PAS_chr1-3_0220 254564907 8196454 404112..405281 1 NC_012963.1 NAD-dependent 5,10-methylenetetrahydrafolate dehydrogenase 405281 8196454 PAS_chr1-3_0220 Pichia pastoris GS115 NAD-dependent 5,10-methylenetetrahydrafolate dehydrogenase XP_002489564.1 404112 D 644223 CDS PAS_chr1-3_0221 254564909 8196455 complement(405553..408720) 1 NC_012963.1 Nuclear pore-associated protein, forms a complex with Thp1p 408720 8196455 PAS_chr1-3_0221 Pichia pastoris GS115 Nuclear pore-associated protein, forms a complex with Thp1p XP_002489565.1 405553 R 644223 CDS PAS_chr1-3_0222 254564911 8196456 join(409074..409198,409265..412721) 1 NC_012963.1 hypothetical protein 412721 8196456 PAS_chr1-3_0222 Pichia pastoris GS115 hypothetical protein XP_002489566.1 409074 D 644223 CDS PAS_chr1-3_0225 254564913 8196457 complement(414994..420189) 1 NC_012963.1 Catalytic subunit of 1,3-beta-D-glucan synthase 420189 8196457 PAS_chr1-3_0225 Pichia pastoris GS115 Catalytic subunit of 1,3-beta-D-glucan synthase XP_002489567.1 414994 R 644223 CDS PAS_chr1-3_0226 254564915 8196458 420955..422571 1 NC_012963.1 Beta-1,3-glucanosyltransferase, required for cell wall assembly 422571 8196458 PAS_chr1-3_0226 Pichia pastoris GS115 Beta-1,3-glucanosyltransferase, required for cell wall assembly XP_002489568.1 420955 D 644223 CDS PAS_chr1-3_0227 254564917 8196459 423294..424901 1 NC_012963.1 Beta-1,3-glucanosyltransferase, required for cell wall assembly 424901 8196459 PAS_chr1-3_0227 Pichia pastoris GS115 Beta-1,3-glucanosyltransferase, required for cell wall assembly XP_002489569.1 423294 D 644223 CDS PAS_chr1-3_0228 254564919 8196460 complement(424946..425803) 1 NC_012963.1 Essential protein involved in rRNA and snoRNA maturation 425803 8196460 PAS_chr1-3_0228 Pichia pastoris GS115 Essential protein involved in rRNA and snoRNA maturation XP_002489570.1 424946 R 644223 CDS PAS_chr1-3_0229 254564921 8196461 complement(426304..427350) 1 NC_012963.1 Cell wall protein with similarity to glucanases 427350 8196461 PAS_chr1-3_0229 Pichia pastoris GS115 Cell wall protein with similarity to glucanases XP_002489571.1 426304 R 644223 CDS PAS_chr1-3_0230 254564923 8196462 complement(428302..429198) 1 NC_012963.1 ER membrane protein that interacts with exocyst subunit Sec6p and with Yip3p 429198 8196462 PAS_chr1-3_0230 Pichia pastoris GS115 ER membrane protein that interacts with exocyst subunit Sec6p and with Yip3p XP_002489572.1 428302 R 644223 CDS PAS_chr1-3_0231 254564925 8196463 complement(429532..430890) 1 NC_012963.1 hypothetical protein 430890 8196463 PAS_chr1-3_0231 Pichia pastoris GS115 hypothetical protein XP_002489573.1 429532 R 644223 CDS PAS_chr1-3_0306 254564927 8196464 431103..433937 1 NC_012963.1 hypothetical protein 433937 8196464 PAS_chr1-3_0306 Pichia pastoris GS115 hypothetical protein XP_002489574.1 431103 D 644223 CDS PAS_chr1-3_0232 254564929 8196835 join(434139..434161,434216..435239) 1 NC_012963.1 Mitogen-activated protein kinase involved in osmoregulation via three independent osmosensors 435239 8196835 PAS_chr1-3_0232 Pichia pastoris GS115 Mitogen-activated protein kinase involved in osmoregulation via three independent osmosensors XP_002489575.1 434139 D 644223 CDS PAS_chr1-3_0233 254564931 8196465 complement(435273..437543) 1 NC_012963.1 hypothetical protein 437543 8196465 PAS_chr1-3_0233 Pichia pastoris GS115 hypothetical protein XP_002489576.1 435273 R 644223 CDS PAS_chr1-3_0234 254564933 8196466 438485..439744 1 NC_012963.1 hypothetical protein 439744 8196466 PAS_chr1-3_0234 Pichia pastoris GS115 hypothetical protein XP_002489577.1 438485 D 644223 CDS PAS_chr1-3_0235 254564935 8196467 441285..442427 1 NC_012963.1 Phosphatidylinositol 4,5-bisphosphate 5-phosphatase with a role in secretio 442427 8196467 PAS_chr1-3_0235 Pichia pastoris GS115 Phosphatidylinositol 4,5-bisphosphate 5-phosphatase with a role in secretio XP_002489578.1 441285 D 644223 CDS PAS_chr1-3_0236 254564937 8196468 complement(442490..443059) 1 NC_012963.1 Protein involved in retention of membrane proteins, including Sec12p, in the ER 443059 8196468 PAS_chr1-3_0236 Pichia pastoris GS115 Protein involved in retention of membrane proteins, including Sec12p, in the ER XP_002489579.1 442490 R 644223 CDS PAS_chr1-3_0237 254564939 8196469 443467..446820 1 NC_012963.1 Karyopherin/importin that interacts with the nuclear pore complex 446820 8196469 PAS_chr1-3_0237 Pichia pastoris GS115 Karyopherin/importin that interacts with the nuclear pore complex XP_002489580.1 443467 D 644223 CDS PAS_chr1-3_0238 254564941 8196470 complement(446912..448387) 1 NC_012963.1 Phosphatidylglycerolphosphate synthase, catalyzes the synthesis of phosphatidylglycerolphosphate 448387 8196470 PAS_chr1-3_0238 Pichia pastoris GS115 Phosphatidylglycerolphosphate synthase, catalyzes the synthesis of phosphatidylglycerolphosphate XP_002489581.1 446912 R 644223 CDS PAS_chr1-3_0239 254564943 8196471 448506..450149 1 NC_012963.1 DRAP deaminase, catalyzes the third step of the riboflavin biosynthesis pathway 450149 8196471 PAS_chr1-3_0239 Pichia pastoris GS115 DRAP deaminase, catalyzes the third step of the riboflavin biosynthesis pathway XP_002489582.1 448506 D 644223 CDS PAS_chr1-3_0240 254564945 8196472 450432..451226 1 NC_012963.1 Flavin adenine dinucleotide (FAD) synthetase 451226 8196472 PAS_chr1-3_0240 Pichia pastoris GS115 Flavin adenine dinucleotide (FAD) synthetase XP_002489583.1 450432 D 644223 CDS PAS_chr1-3_0241 254564947 8196473 complement(451229..451885) 1 NC_012963.1 hypothetical protein 451885 8196473 PAS_chr1-3_0241 Pichia pastoris GS115 hypothetical protein XP_002489584.1 451229 R 644223 CDS PAS_chr1-3_0242 254564949 8196474 complement(451979..453271) 1 NC_012963.1 Component of the evolutionarily conserved kinetochore-associated Ndc80 complex 453271 8196474 PAS_chr1-3_0242 Pichia pastoris GS115 Component of the evolutionarily conserved kinetochore-associated Ndc80 complex XP_002489585.1 451979 R 644223 CDS PAS_chr1-3_0243 254564951 8196475 453444..454193 1 NC_012963.1 Subunit of a complex, with Slx4p, that hydrolyzes 5' branches from duplex DNA 454193 8196475 PAS_chr1-3_0243 Pichia pastoris GS115 Subunit of a complex, with Slx4p, that hydrolyzes 5' branches from duplex DNA XP_002489586.1 453444 D 644223 CDS PAS_chr1-3_0244 254564953 8196476 complement(join(454182..454933,454981..455689)) 1 NC_012963.1 Cytoplasmic and mitochondrial histidine tRNA synthetase 455689 8196476 PAS_chr1-3_0244 Pichia pastoris GS115 Cytoplasmic and mitochondrial histidine tRNA synthetase XP_002489587.1 454182 R 644223 CDS PAS_chr1-3_0307 254564955 8196477 complement(455818..458397) 1 NC_012963.1 hypothetical protein 458397 8196477 PAS_chr1-3_0307 Pichia pastoris GS115 hypothetical protein XP_002489588.1 455818 R 644223 CDS PAS_chr1-3_0308 254564957 8196836 458691..458996 1 NC_012963.1 hypothetical protein 458996 8196836 PAS_chr1-3_0308 Pichia pastoris GS115 hypothetical protein XP_002489589.1 458691 D 644223 CDS PAS_chr1-3_0245 254564959 8196837 join(459272..459468,459787..460138) 1 NC_012963.1 hypothetical protein 460138 8196837 PAS_chr1-3_0245 Pichia pastoris GS115 hypothetical protein XP_002489590.1 459272 D 644223 CDS PAS_chr1-3_0246 254564961 8196478 complement(460227..460973) 1 NC_012963.1 Essential protein associated with the U1 snRNP complex 460973 8196478 PAS_chr1-3_0246 Pichia pastoris GS115 Essential protein associated with the U1 snRNP complex XP_002489591.1 460227 R 644223 CDS PAS_chr1-3_0247 254564963 8196479 461199..461774 1 NC_012963.1 Catalytic subunit of the mitochondrial inner membrane peptidase complex 461774 8196479 PAS_chr1-3_0247 Pichia pastoris GS115 Catalytic subunit of the mitochondrial inner membrane peptidase complex XP_002489592.1 461199 D 644223 CDS PAS_chr1-3_0248 254564965 8196480 461920..462672 1 NC_012963.1 hypothetical protein 462672 8196480 PAS_chr1-3_0248 Pichia pastoris GS115 hypothetical protein XP_002489593.1 461920 D 644223 CDS PAS_chr1-3_0249 254564967 8196481 462856..464373 1 NC_012963.1 hypothetical protein 464373 8196481 PAS_chr1-3_0249 Pichia pastoris GS115 hypothetical protein XP_002489594.1 462856 D 644223 CDS PAS_chr1-3_0250 254564969 8196482 complement(join(464370..465026,465112..465522)) 1 NC_012963.1 Mitochondrial carrier protein involved in the accumulation of CoA in the mitochondrial matrix 465522 8196482 PAS_chr1-3_0250 Pichia pastoris GS115 Mitochondrial carrier protein involved in the accumulation of CoA in the mitochondrial matrix XP_002489595.1 464370 R 644223 CDS PAS_chr1-3_0251 254564971 8196483 466221..467435 1 NC_012963.1 Mannosyltransferase of the cis-Golgi apparatus 467435 8196483 PAS_chr1-3_0251 Pichia pastoris GS115 Mannosyltransferase of the cis-Golgi apparatus XP_002489596.1 466221 D 644223 CDS PAS_chr1-3_0252 254564973 8196484 467706..469409 1 NC_012963.1 DNA-binding protein involved in either activation or repression of transcription 469409 8196484 PAS_chr1-3_0252 Pichia pastoris GS115 DNA-binding protein involved in either activation or repression of transcription XP_002489597.1 467706 D 644223 CDS PAS_chr1-3_0253 254564975 8196485 complement(469467..470540) 1 NC_012963.1 hypothetical protein 470540 8196485 PAS_chr1-3_0253 Pichia pastoris GS115 hypothetical protein XP_002489598.1 469467 R 644223 CDS PAS_chr1-3_0254 254564977 8196486 complement(470731..472842) 1 NC_012963.1 GTPase-activating protein for yeast Rab family members 472842 8196486 PAS_chr1-3_0254 Pichia pastoris GS115 GTPase-activating protein for yeast Rab family members XP_002489599.1 470731 R 644223 CDS PAS_chr1-3_0255 254564979 8196487 complement(472985..473629) 1 NC_012963.1 Polyamine acetyltransferase 473629 8196487 PAS_chr1-3_0255 Pichia pastoris GS115 Polyamine acetyltransferase XP_002489600.1 472985 R 644223 CDS PAS_chr1-3_0256 254564981 8196488 473818..474057 1 NC_012963.1 hypothetical protein 474057 8196488 PAS_chr1-3_0256 Pichia pastoris GS115 hypothetical protein XP_002489601.1 473818 D 644223 CDS PAS_chr1-3_0257 254564983 8196489 complement(join(474086..474619,474709..475011)) 1 NC_012963.1 3-methyl-adenine DNA glycosylase involved in protecting DNA against alkylating agents 475011 8196489 PAS_chr1-3_0257 Pichia pastoris GS115 3-methyl-adenine DNA glycosylase involved in protecting DNA against alkylating agents XP_002489602.1 474086 R 644223 CDS PAS_chr1-3_0258 254564985 8196490 475067..476257 1 NC_012963.1 DNA damage-inducible v-SNARE binding protein, contains a ubiquitin-associated (UBA) domain 476257 8196490 PAS_chr1-3_0258 Pichia pastoris GS115 DNA damage-inducible v-SNARE binding protein, contains a ubiquitin-associated (UBA) domain XP_002489603.1 475067 D 644223 CDS PAS_chr1-3_0259 254564987 8196491 complement(476258..476821) 1 NC_012963.1 Cytoplasmic protein required for replication of Brome mosaic virus in S. cerevisiae 476821 8196491 PAS_chr1-3_0259 Pichia pastoris GS115 Cytoplasmic protein required for replication of Brome mosaic virus in S. cerevisiae XP_002489604.1 476258 R 644223 CDS PAS_chr1-3_0260 254564989 8196492 476939..477907 1 NC_012963.1 hypothetical protein 477907 8196492 PAS_chr1-3_0260 Pichia pastoris GS115 hypothetical protein XP_002489605.1 476939 D 644223 CDS PAS_chr1-3_0261 254564991 8196493 complement(477935..480061) 1 NC_012963.1 Ubiquitin isopeptidase 480061 8196493 PAS_chr1-3_0261 Pichia pastoris GS115 Ubiquitin isopeptidase XP_002489606.1 477935 R 644223 CDS PAS_chr1-3_0262 254564993 8196494 480240..482597 1 NC_012963.1 Mitochondrial membrane protein that coordinates expression of mitochondrially-encoded genes 482597 8196494 PAS_chr1-3_0262 Pichia pastoris GS115 Mitochondrial membrane protein that coordinates expression of mitochondrially-encoded genes XP_002489607.1 480240 D 644223 CDS PAS_chr1-3_0264 254564995 8196495 483173..483670 1 NC_012963.1 Cytoplasmic peptidyl-prolyl cis-trans isomerase (cyclophilin) 483670 8196495 PAS_chr1-3_0264 Pichia pastoris GS115 Cytoplasmic peptidyl-prolyl cis-trans isomerase (cyclophilin) XP_002489608.1 483173 D 644223 CDS PAS_chr1-3_0309 254564997 8196496 join(483919..483994,484055..485007) 1 NC_012963.1 hypothetical protein 485007 8196496 PAS_chr1-3_0309 Pichia pastoris GS115 hypothetical protein XP_002489609.1 483919 D 644223 CDS PAS_chr1-3_0265 254564999 8196838 complement(485030..485737) 1 NC_012963.1 hypothetical protein 485737 8196838 PAS_chr1-3_0265 Pichia pastoris GS115 hypothetical protein XP_002489610.1 485030 R 644223 CDS PAS_chr1-3_0266 254565001 8196497 485953..487137 1 NC_012963.1 hypothetical protein 487137 8196497 PAS_chr1-3_0266 Pichia pastoris GS115 hypothetical protein XP_002489611.1 485953 D 644223 CDS PAS_chr1-3_0267 254565003 8196498 complement(487236..487709) 1 NC_012963.1 Protein involved in the HOG (high osmolarity glycerol) pathway 487709 8196498 PAS_chr1-3_0267 Pichia pastoris GS115 Protein involved in the HOG (high osmolarity glycerol) pathway XP_002489612.1 487236 R 644223 CDS PAS_chr1-3_0268 254565005 8196499 487915..488532 1 NC_012963.1 hypothetical protein 488532 8196499 PAS_chr1-3_0268 Pichia pastoris GS115 hypothetical protein XP_002489613.1 487915 D 644223 CDS PAS_chr1-3_0269 254565007 8196500 complement(488587..490008) 1 NC_012963.1 Proline oxidase, nuclear-encoded mitochondrial protein 490008 8196500 PAS_chr1-3_0269 Pichia pastoris GS115 Proline oxidase, nuclear-encoded mitochondrial protein XP_002489614.1 488587 R 644223 CDS PAS_chr1-3_0310 254565009 8196501 complement(join(491053..492351,492404..492424)) 1 NC_012963.1 hypothetical protein 492424 8196501 PAS_chr1-3_0310 Pichia pastoris GS115 hypothetical protein XP_002489615.1 491053 R 644223 CDS PAS_chr1-3_0271 254565011 8196839 complement(492550..493866) 1 NC_012963.1 Non-essential tRNA:pseudouridine synthase 493866 8196839 PAS_chr1-3_0271 Pichia pastoris GS115 Non-essential tRNA:pseudouridine synthase XP_002489616.1 492550 R 644223 CDS PAS_chr1-3_0311 254565013 8196502 494007..494786 1 NC_012963.1 hypothetical protein 494786 8196502 PAS_chr1-3_0311 Pichia pastoris GS115 hypothetical protein XP_002489617.1 494007 D 644223 CDS PAS_chr1-3_0272 254565015 8196840 494885..496729 1 NC_012963.1 Putative ATP-dependent RNA helicase, nucleolar protein 496729 8196840 PAS_chr1-3_0272 Pichia pastoris GS115 Putative ATP-dependent RNA helicase, nucleolar protein XP_002489618.1 494885 D 644223 CDS PAS_chr1-3_0273 254565017 8196503 complement(496764..497927) 1 NC_012963.1 Putative cysteine synthase, localized to the mitochondrial outer membrane 497927 8196503 PAS_chr1-3_0273 Pichia pastoris GS115 Putative cysteine synthase, localized to the mitochondrial outer membrane XP_002489619.1 496764 R 644223 CDS PAS_chr1-3_0274 254565019 8196504 498266..500863 1 NC_012963.1 hypothetical protein 500863 8196504 PAS_chr1-3_0274 Pichia pastoris GS115 hypothetical protein XP_002489620.1 498266 D 644223 CDS PAS_chr1-3_0275 254565021 8196807 500977..502728 1 NC_012963.1 hypothetical protein 502728 8196807 PAS_chr1-3_0275 Pichia pastoris GS115 hypothetical protein XP_002489621.1 500977 D 644223 CDS PAS_chr1-3_0276 254565023 8196808 503314..505887 1 NC_012963.1 Mucin family member 505887 8196808 PAS_chr1-3_0276 Pichia pastoris GS115 Mucin family member XP_002489622.1 503314 D 644223 CDS PAS_chr1-3_0277 254565025 8196809 complement(505963..506577) 1 NC_012963.1 hypothetical protein 506577 8196809 PAS_chr1-3_0277 Pichia pastoris GS115 hypothetical protein XP_002489623.1 505963 R 644223 CDS PAS_chr1-3_0278 254565027 8196810 507150..507623 1 NC_012963.1 hypothetical protein 507623 8196810 PAS_chr1-3_0278 Pichia pastoris GS115 hypothetical protein XP_002489624.1 507150 D 644223 CDS PAS_chr1-3_0279 254565029 8196811 complement(507620..508201) 1 NC_012963.1 hypothetical protein 508201 8196811 PAS_chr1-3_0279 Pichia pastoris GS115 hypothetical protein XP_002489625.1 507620 R 644223 CDS PAS_chr1-3_0280 254565031 8196812 508560..509138 1 NC_012963.1 hypothetical protein 509138 8196812 PAS_chr1-3_0280 Pichia pastoris GS115 hypothetical protein XP_002489626.1 508560 D 644223 CDS PAS_chr1-3_0312 254565033 8196813 join(509334..509472,509525..509574) 1 NC_012963.1 hypothetical protein 509574 8196813 PAS_chr1-3_0312 Pichia pastoris GS115 hypothetical protein XP_002489627.1 509334 D 644223 CDS PAS_chr1-3_0281 254565035 8196841 complement(509630..510661) 1 NC_012963.1 Subunit of the core complex of translation initiation factor (eIF3) 510661 8196841 PAS_chr1-3_0281 Pichia pastoris GS115 Subunit of the core complex of translation initiation factor (eIF3) XP_002489628.1 509630 R 644223 CDS PAS_chr1-3_0285 254565037 8196814 complement(514184..515893) 1 NC_012963.1 hypothetical protein 515893 8196814 PAS_chr1-3_0285 Pichia pastoris GS115 hypothetical protein XP_002489629.1 514184 R 644223 CDS PAS_chr1-3_0287 254565039 8196815 complement(520327..521769) 1 NC_012963.1 hypothetical protein 521769 8196815 PAS_chr1-3_0287 Pichia pastoris GS115 hypothetical protein XP_002489630.1 520327 R 644223 CDS PAS_chr1-3_0288 254565041 8196816 521885..523117 1 NC_012963.1 hypothetical protein 523117 8196816 PAS_chr1-3_0288 Pichia pastoris GS115 hypothetical protein XP_002489631.1 521885 D 644223 CDS PAS_chr1-3_0289 254565043 8196817 complement(523189..524532) 1 NC_012963.1 hypothetical protein 524532 8196817 PAS_chr1-3_0289 Pichia pastoris GS115 hypothetical protein XP_002489632.1 523189 R 644223 CDS PAS_chr1-1_0002 254565045 8196818 526519..529209 1 NC_012963.1 Plasma membrane H+-ATPase, pumps protons out of the cell 529209 8196818 PAS_chr1-1_0002 Pichia pastoris GS115 Plasma membrane H+-ATPase, pumps protons out of the cell XP_002489633.1 526519 D 644223 CDS PAS_chr1-1_0003 254565047 8197520 529908..531719 1 NC_012963.1 Probable transporter 531719 8197520 PAS_chr1-1_0003 Pichia pastoris GS115 Probable transporter XP_002489634.1 529908 D 644223 CDS PAS_chr1-1_0459 254565049 8197521 531902..532684 1 NC_012963.1 Dolichol-phosphate mannosyltransferase 532684 8197521 PAS_chr1-1_0459 Pichia pastoris GS115 Dolichol-phosphate mannosyltransferase XP_002489635.1 531902 D 644223 CDS PAS_chr1-1_0461 254565051 8197900 532864..533487 1 NC_012963.1 hypothetical protein 533487 8197900 PAS_chr1-1_0461 Pichia pastoris GS115 hypothetical protein XP_002489636.1 532864 D 644223 CDS PAS_chr1-1_0460 254565053 8197902 533971..536490 1 NC_012963.1 hypothetical protein 536490 8197902 PAS_chr1-1_0460 Pichia pastoris GS115 hypothetical protein XP_002489637.1 533971 D 644223 CDS PAS_chr1-1_0004 254565055 8197901 complement(536447..539260) 1 NC_012963.1 U3 small nucleolar RNA-associated protein 539260 8197901 PAS_chr1-1_0004 Pichia pastoris GS115 U3 small nucleolar RNA-associated protein XP_002489638.1 536447 R 644223 CDS PAS_chr1-1_0005 254565057 8197522 539539..542739 1 NC_012963.1 Inositol hexakisphosphate and inositol heptakisphosphate kinase 542739 8197522 PAS_chr1-1_0005 Pichia pastoris GS115 Inositol hexakisphosphate and inositol heptakisphosphate kinase XP_002489639.1 539539 D 644223 CDS PAS_chr1-1_0006 254565059 8197523 complement(542794..544071) 1 NC_012963.1 Ribose-phosphate pyrophosphokinase 544071 8197523 PAS_chr1-1_0006 Pichia pastoris GS115 Ribose-phosphate pyrophosphokinase XP_002489640.1 542794 R 644223 CDS PAS_chr1-1_0007 254565061 8197524 544347..545048 1 NC_012963.1 SRR1 domain-containing protein 545048 8197524 PAS_chr1-1_0007 Pichia pastoris GS115 SRR1 domain-containing protein XP_002489641.1 544347 D 644223 CDS PAS_chr1-1_0008 254565063 8197525 complement(545269..551478) 1 NC_012963.1 Beta subunit of fatty acid synthetase; catalyzes the synthesis of long-chain saturated fatty acids 551478 8197525 PAS_chr1-1_0008 Pichia pastoris GS115 Beta subunit of fatty acid synthetase; catalyzes the synthesis of long-chain saturated fatty acids XP_002489642.1 545269 R 644223 CDS PAS_chr1-1_0009 254565065 8197526 552345..556775 1 NC_012963.1 Serine esterase that deacylates exogenous lysophospholipids 556775 8197526 PAS_chr1-1_0009 Pichia pastoris GS115 Serine esterase that deacylates exogenous lysophospholipids XP_002489643.1 552345 D 644223 CDS PAS_chr1-1_0010 254565067 8197527 complement(557993..559849) 1 NC_012963.1 Peptidase that deconjugates Smt3/SUMO-1 peptides from proteins 559849 8197527 PAS_chr1-1_0010 Pichia pastoris GS115 Peptidase that deconjugates Smt3/SUMO-1 peptides from proteins XP_002489644.1 557993 R 644223 CDS PAS_chr1-1_0011 254565069 8197528 560545..562128 1 NC_012963.1 Thiol oxidase required for oxidative protein folding in the endoplasmic reticulum 562128 8197528 PAS_chr1-1_0011 Pichia pastoris GS115 Thiol oxidase required for oxidative protein folding in the endoplasmic reticulum XP_002489645.1 560545 D 644223 CDS PAS_chr1-1_0012 254565071 8197529 complement(562179..562598) 1 NC_012963.1 TFIID subunit (19 kDa), involved in RNA polymerase II transcription initiation 562598 8197529 PAS_chr1-1_0012 Pichia pastoris GS115 TFIID subunit (19 kDa), involved in RNA polymerase II transcription initiation XP_002489646.1 562179 R 644223 CDS PAS_chr1-1_0013 254565073 8197530 562948..564576 1 NC_012963.1 hypothetical protein 564576 8197530 PAS_chr1-1_0013 Pichia pastoris GS115 hypothetical protein XP_002489647.1 562948 D 644223 CDS PAS_chr1-1_0014 254565075 8197531 complement(564668..564922) 1 NC_012963.1 Lsm (Like Sm) protein 564922 8197531 PAS_chr1-1_0014 Pichia pastoris GS115 Lsm (Like Sm) protein XP_002489648.1 564668 R 644223 CDS PAS_chr1-1_0015 254565077 8197532 join(565124..566210,566242..567509) 1 NC_012963.1 Putative endoribonuclease 567509 8197532 PAS_chr1-1_0015 Pichia pastoris GS115 Putative endoribonuclease XP_002489649.1 565124 D 644223 CDS PAS_chr1-1_0016 254565079 8197533 complement(567585..569822) 1 NC_012963.1 transcription factor 569822 8197533 PAS_chr1-1_0016 Pichia pastoris GS115 transcription factor XP_002489650.1 567585 R 644223 CDS PAS_chr1-1_0017 254565081 8197534 complement(570347..571063) 1 NC_012963.1 hypothetical protein 571063 8197534 PAS_chr1-1_0017 Pichia pastoris GS115 hypothetical protein XP_002489651.1 570347 R 644223 CDS PAS_chr1-1_0018 254565083 8197535 complement(571153..572739) 1 NC_012963.1 Subunit of the heterodimeric FACT complex (Spt16p-Pob3p) 572739 8197535 PAS_chr1-1_0018 Pichia pastoris GS115 Subunit of the heterodimeric FACT complex (Spt16p-Pob3p) XP_002489652.1 571153 R 644223 CDS PAS_chr1-1_0019 254565085 8197536 join(572961..573189,573344..574425) 1 NC_012963.1 Component of the TREX complex required for nuclear mRNA export 574425 8197536 PAS_chr1-1_0019 Pichia pastoris GS115 Component of the TREX complex required for nuclear mRNA export XP_002489653.1 572961 D 644223 CDS PAS_chr1-1_0020 254565087 8197537 complement(574516..575778) 1 NC_012963.1 Actin-like protein 575778 8197537 PAS_chr1-1_0020 Pichia pastoris GS115 Actin-like protein XP_002489654.1 574516 R 644223 CDS PAS_chr1-1_0462 254565089 8197538 complement(575900..578170) 1 NC_012963.1 hypothetical protein 578170 8197538 PAS_chr1-1_0462 Pichia pastoris GS115 hypothetical protein XP_002489655.1 575900 R 644223 CDS PAS_chr1-1_0021 254565091 8197903 complement(578772..579494) 1 NC_012963.1 hypothetical protein 579494 8197903 PAS_chr1-1_0021 Pichia pastoris GS115 hypothetical protein XP_002489656.1 578772 R 644223 CDS PAS_chr1-1_0022 254565093 8197539 579699..580802 1 NC_012963.1 Essential conserved nucleolar protein necessary for biogenesis of 60S ribosomal subunits 580802 8197539 PAS_chr1-1_0022 Pichia pastoris GS115 Essential conserved nucleolar protein necessary for biogenesis of 60S ribosomal subunits XP_002489657.1 579699 D 644223 CDS PAS_chr1-1_0023 254565095 8197540 580942..581136 1 NC_012963.1 hypothetical protein 581136 8197540 PAS_chr1-1_0023 Pichia pastoris GS115 hypothetical protein XP_002489658.1 580942 D 644223 CDS PAS_chr1-1_0024 254565097 8197541 581394..582425 1 NC_012963.1 hypothetical protein 582425 8197541 PAS_chr1-1_0024 Pichia pastoris GS115 hypothetical protein XP_002489659.1 581394 D 644223 CDS PAS_chr1-1_0025 254565099 8197542 complement(582462..585524) 1 NC_012963.1 DNA repair protein 585524 8197542 PAS_chr1-1_0025 Pichia pastoris GS115 DNA repair protein XP_002489660.1 582462 R 644223 CDS PAS_chr1-1_0026 254565101 8197543 585851..588076 1 NC_012963.1 hypothetical protein 588076 8197543 PAS_chr1-1_0026 Pichia pastoris GS115 hypothetical protein XP_002489661.1 585851 D 644223 CDS PAS_chr1-1_0027 254565103 8197544 complement(588069..588815) 1 NC_012963.1 hypothetical protein 588815 8197544 PAS_chr1-1_0027 Pichia pastoris GS115 hypothetical protein XP_002489662.1 588069 R 644223 CDS PAS_chr1-1_0028 254565105 8197545 590598..592190 1 NC_012963.1 Glycerol proton symporter of the plasma membrane, subject to glucose-induced inactivation 592190 8197545 PAS_chr1-1_0028 Pichia pastoris GS115 Glycerol proton symporter of the plasma membrane, subject to glucose-induced inactivation XP_002489663.1 590598 D 644223 CDS PAS_chr1-1_0029 254565107 8197546 complement(593578..594291) 1 NC_012963.1 hypothetical protein 594291 8197546 PAS_chr1-1_0029 Pichia pastoris GS115 hypothetical protein XP_002489664.1 593578 R 644223 CDS PAS_chr1-1_0030 254565109 8197547 complement(594551..596305) 1 NC_012963.1 General amino acid permease 596305 8197547 PAS_chr1-1_0030 Pichia pastoris GS115 General amino acid permease XP_002489665.1 594551 R 644223 CDS PAS_chr1-1_0464 254565111 8197548 597186..598031 1 NC_012963.1 hypothetical protein 598031 8197548 PAS_chr1-1_0464 Pichia pastoris GS115 hypothetical protein XP_002489666.1 597186 D 644223 CDS PAS_chr1-1_0465 254565113 8197904 complement(598051..599640) 1 NC_012963.1 hypothetical protein 599640 8197904 PAS_chr1-1_0465 Pichia pastoris GS115 hypothetical protein XP_002489667.1 598051 R 644223 CDS PAS_chr1-1_0031 254565115 8197905 complement(599832..601055) 1 NC_012963.1 Cytoplasmic pre-60S factor 601055 8197905 PAS_chr1-1_0031 Pichia pastoris GS115 Cytoplasmic pre-60S factor XP_002489668.1 599832 R 644223 CDS PAS_chr1-1_0466 254565117 8197549 complement(601199..602920) 1 NC_012963.1 hypothetical protein 602920 8197549 PAS_chr1-1_0466 Pichia pastoris GS115 hypothetical protein XP_002489669.1 601199 R 644223 CDS PAS_chr1-1_0032 254565119 8197906 complement(603055..604419) 1 NC_012963.1 Component of the mitochondrial Tim54p-Tim22p complex 604419 8197906 PAS_chr1-1_0032 Pichia pastoris GS115 Component of the mitochondrial Tim54p-Tim22p complex XP_002489670.1 603055 R 644223 CDS PAS_chr1-1_0467 254565121 8197550 complement(604554..605780) 1 NC_012963.1 hypothetical protein 605780 8197550 PAS_chr1-1_0467 Pichia pastoris GS115 hypothetical protein XP_002489671.1 604554 R 644223 CDS PAS_chr1-1_0033 254565123 8197907 606302..607468 1 NC_012963.1 hypothetical protein 607468 8197907 PAS_chr1-1_0033 Pichia pastoris GS115 hypothetical protein XP_002489672.1 606302 D 644223 CDS PAS_chr1-1_0034 254565125 8197551 complement(join(607555..608184,608238..608285)) 1 NC_012963.1 vacuolar sorting protein 608285 8197551 PAS_chr1-1_0034 Pichia pastoris GS115 vacuolar sorting protein XP_002489673.1 607555 R 644223 CDS PAS_chr1-1_0035 254565127 8197552 complement(608498..610612) 1 NC_012963.1 Delta subunit of the coatomer complex (COPI), which coats Golgi-derived transport vesicles 610612 8197552 PAS_chr1-1_0035 Pichia pastoris GS115 Delta subunit of the coatomer complex (COPI), which coats Golgi-derived transport vesicles XP_002489674.1 608498 R 644223 CDS PAS_chr1-1_0036 254565129 8197553 611271..612866 1 NC_012963.1 Hsp70 protein that interacts with Zuo1p (a DnaJ homolog) to form a ribosome-associated complex 612866 8197553 PAS_chr1-1_0036 Pichia pastoris GS115 Hsp70 protein that interacts with Zuo1p (a DnaJ homolog) to form a ribosome-associated complex XP_002489675.1 611271 D 644223 CDS PAS_chr1-1_0037 254565131 8197554 complement(612911..614272) 1 NC_012963.1 hypothetical protein 614272 8197554 PAS_chr1-1_0037 Pichia pastoris GS115 hypothetical protein XP_002489676.1 612911 R 644223 CDS PAS_chr1-1_0038 254565133 8197555 614490..616586 1 NC_012963.1 Origin-binding F-box protein that forms an SCF ubiquitin ligase complex with Skp1p and Cdc53p 616586 8197555 PAS_chr1-1_0038 Pichia pastoris GS115 Origin-binding F-box protein that forms an SCF ubiquitin ligase complex with Skp1p and Cdc53p XP_002489677.1 614490 D 644223 CDS PAS_chr1-1_0039 254565135 8197556 complement(616602..618458) 1 NC_012963.1 Myb-related transcription factor 618458 8197556 PAS_chr1-1_0039 Pichia pastoris GS115 Myb-related transcription factor XP_002489678.1 616602 R 644223 CDS PAS_chr1-1_0040 254565137 8197557 618896..621763 1 NC_012963.1 Ubiquitin carboxyl-terminal hydrolase 621763 8197557 PAS_chr1-1_0040 Pichia pastoris GS115 Ubiquitin carboxyl-terminal hydrolase XP_002489679.1 618896 D 644223 CDS PAS_chr1-1_0041 254565139 8197558 621975..623366 1 NC_012963.1 hypothetical protein 623366 8197558 PAS_chr1-1_0041 Pichia pastoris GS115 hypothetical protein XP_002489680.1 621975 D 644223 CDS PAS_chr1-1_0042 254565141 8197559 complement(623383..625512) 1 NC_012963.1 Multistep regulator of cAMP-PKA signaling 625512 8197559 PAS_chr1-1_0042 Pichia pastoris GS115 Multistep regulator of cAMP-PKA signaling XP_002489681.1 623383 R 644223 CDS PAS_chr1-1_0043 254565143 8197560 join(625745..626183,626317..627434) 1 NC_012963.1 hypothetical protein 627434 8197560 PAS_chr1-1_0043 Pichia pastoris GS115 hypothetical protein XP_002489682.1 625745 D 644223 CDS PAS_chr1-1_0044 254565145 8197561 complement(627501..628502) 1 NC_012963.1 ER membrane protein,N-acetylglucosaminyl phosphatidylinositol de-N-acetylase 628502 8197561 PAS_chr1-1_0044 Pichia pastoris GS115 ER membrane protein,N-acetylglucosaminyl phosphatidylinositol de-N-acetylase XP_002489683.1 627501 R 644223 CDS PAS_chr1-1_0045 254565147 8197562 complement(628674..632351) 1 NC_012963.1 Largest of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC) 632351 8197562 PAS_chr1-1_0045 Pichia pastoris GS115 Largest of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC) XP_002489684.1 628674 R 644223 CDS PAS_chr1-1_0046 254565149 8197563 complement(632519..633376) 1 NC_012963.1 Component of the SSU processome, which is required for pre-18S rRNA processing 633376 8197563 PAS_chr1-1_0046 Pichia pastoris GS115 Component of the SSU processome, which is required for pre-18S rRNA processing XP_002489685.1 632519 R 644223 CDS PAS_chr1-1_0047 254565151 8197564 complement(633504..635126) 1 NC_012963.1 Mitochondrial lysine-tRNA synthetase 635126 8197564 PAS_chr1-1_0047 Pichia pastoris GS115 Mitochondrial lysine-tRNA synthetase XP_002489686.1 633504 R 644223 CDS PAS_chr1-1_0048 254565153 8197565 join(635291..635293,635364..637595) 1 NC_012963.1 GTPase-activating protein 637595 8197565 PAS_chr1-1_0048 Pichia pastoris GS115 GTPase-activating protein XP_002489687.1 635291 D 644223 CDS PAS_chr1-1_0049 254565155 8197566 637787..638731 1 NC_012963.1 Ribonuclease H2 catalytic subunit, removes RNA primers during Okazaki fragment synthesis 638731 8197566 PAS_chr1-1_0049 Pichia pastoris GS115 Ribonuclease H2 catalytic subunit, removes RNA primers during Okazaki fragment synthesis XP_002489688.1 637787 D 644223 CDS PAS_chr1-1_0050 254565157 8197567 join(639010..639059,639121..640492) 1 NC_012963.1 Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex 640492 8197567 PAS_chr1-1_0050 Pichia pastoris GS115 Dihydrolipoamide acetyltransferase component (E2) of pyruvate dehydrogenase complex XP_002489689.1 639010 D 644223 CDS PAS_chr1-1_0051 254565159 8197568 640982..642793 1 NC_012963.1 hypothetical protein 642793 8197568 PAS_chr1-1_0051 Pichia pastoris GS115 hypothetical protein XP_002489690.1 640982 D 644223 CDS PAS_chr1-1_0052 254565161 8197569 643162..644382 1 NC_012963.1 hypothetical protein 644382 8197569 PAS_chr1-1_0052 Pichia pastoris GS115 hypothetical protein XP_002489691.1 643162 D 644223 CDS PAS_chr1-1_0053 254565163 8197570 complement(644709..648005) 1 NC_012963.1 Translation initiation factor eIF4G, subunit of the mRNA cap-binding protein complex (eIF4F) 648005 8197570 PAS_chr1-1_0053 Pichia pastoris GS115 Translation initiation factor eIF4G, subunit of the mRNA cap-binding protein complex (eIF4F) XP_002489692.1 644709 R 644223 CDS PAS_chr1-1_0054 254565165 8197571 join(649007..649028,649066..650201) 1 NC_012963.1 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation 650201 8197571 PAS_chr1-1_0054 Pichia pastoris GS115 One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation XP_002489693.1 649007 D 644223 CDS PAS_chr1-1_0055 254565167 8197572 complement(650226..652259) 1 NC_012963.1 Protein that interacts with Cdc48p and Npl4p, involved in recognition of polyubiquitinated proteins 652259 8197572 PAS_chr1-1_0055 Pichia pastoris GS115 Protein that interacts with Cdc48p and Npl4p, involved in recognition of polyubiquitinated proteins XP_002489694.1 650226 R 644223 CDS PAS_chr1-1_0056 254565169 8197573 652629..654872 1 NC_012963.1 Zinc-regulated transcription factor, binds to zinc-responsive promoter elements 654872 8197573 PAS_chr1-1_0056 Pichia pastoris GS115 Zinc-regulated transcription factor, binds to zinc-responsive promoter elements XP_002489695.1 652629 D 644223 CDS PAS_chr1-1_0057 254565171 8197574 655205..656683 1 NC_012963.1 Putative protein serine/threonine kinase expressed at the end of meiosis 656683 8197574 PAS_chr1-1_0057 Pichia pastoris GS115 Putative protein serine/threonine kinase expressed at the end of meiosis XP_002489696.1 655205 D 644223 CDS PAS_chr1-1_0058 254565173 8197575 complement(656720..658222) 1 NC_012963.1 GTPase that associates with nuclear 60S pre-ribosomes, required for export of 60S ribosomal subunits 658222 8197575 PAS_chr1-1_0058 Pichia pastoris GS115 GTPase that associates with nuclear 60S pre-ribosomes, required for export of 60S ribosomal subunits XP_002489697.1 656720 R 644223 CDS PAS_chr1-1_0059 254565175 8197576 658387..659415 1 NC_012963.1 Transcription factor TFIIB, a general transcription factor 659415 8197576 PAS_chr1-1_0059 Pichia pastoris GS115 Transcription factor TFIIB, a general transcription factor XP_002489698.1 658387 D 644223 CDS PAS_chr1-1_0060 254565177 8197577 complement(659502..659846) 1 NC_012963.1 hypothetical protein 659846 8197577 PAS_chr1-1_0060 Pichia pastoris GS115 hypothetical protein XP_002489699.1 659502 R 644223 CDS PAS_chr1-1_0061 254565179 8197578 660014..661654 1 NC_012963.1 ATP-dependent RNA helicase 661654 8197578 PAS_chr1-1_0061 Pichia pastoris GS115 ATP-dependent RNA helicase XP_002489700.1 660014 D 644223 CDS PAS_chr1-1_0062 254565181 8197660 661847..662602 1 NC_012963.1 GTP-cyclohydrolase I, catalyzes the first step in the folic acid biosynthetic pathway 662602 8197660 PAS_chr1-1_0062 Pichia pastoris GS115 GTP-cyclohydrolase I, catalyzes the first step in the folic acid biosynthetic pathway XP_002489701.1 661847 D 644223 CDS PAS_chr1-1_0063 254565183 8197191 complement(662715..664763) 1 NC_012963.1 Apyrase with wide substrate specificity 664763 8197191 PAS_chr1-1_0063 Pichia pastoris GS115 Apyrase with wide substrate specificity XP_002489702.1 662715 R 644223 CDS PAS_chr1-1_0064 254565185 8197192 665542..666084 1 NC_012963.1 hypothetical protein 666084 8197192 PAS_chr1-1_0064 Pichia pastoris GS115 hypothetical protein XP_002489703.1 665542 D 644223 CDS PAS_chr1-1_0468 254565187 8197193 complement(join(666156..666729,666779..666783)) 1 NC_012963.1 hypothetical protein 666783 8197193 PAS_chr1-1_0468 Pichia pastoris GS115 hypothetical protein XP_002489704.1 666156 R 644223 CDS PAS_chr1-1_0065 254565189 8197908 complement(667300..669432) 1 NC_012963.1 Component of the U2 snRNP 669432 8197908 PAS_chr1-1_0065 Pichia pastoris GS115 Component of the U2 snRNP XP_002489705.1 667300 R 644223 CDS PAS_chr1-1_0066 254565191 8197194 669837..671249 1 NC_012963.1 Putative X-Pro aminopeptidase 671249 8197194 PAS_chr1-1_0066 Pichia pastoris GS115 Putative X-Pro aminopeptidase XP_002489706.1 669837 D 644223 CDS PAS_chr1-1_0067 254565193 8197195 complement(671278..672870) 1 NC_012963.1 Essential N-acetylglucosamine-phosphate mutase 672870 8197195 PAS_chr1-1_0067 Pichia pastoris GS115 Essential N-acetylglucosamine-phosphate mutase XP_002489707.1 671278 R 644223 CDS PAS_chr1-1_0068 254565195 8197196 673016..673702 1 NC_012963.1 hypothetical protein 673702 8197196 PAS_chr1-1_0068 Pichia pastoris GS115 hypothetical protein XP_002489708.1 673016 D 644223 CDS PAS_chr1-1_0069 254565197 8197197 complement(673772..675481) 1 NC_012963.1 Plasma membrane protein involved in remodeling GPI anchors 675481 8197197 PAS_chr1-1_0069 Pichia pastoris GS115 Plasma membrane protein involved in remodeling GPI anchors XP_002489709.1 673772 R 644223 CDS PAS_chr1-1_0469 254565199 8197198 675818..676507 1 NC_012963.1 hypothetical protein 676507 8197198 PAS_chr1-1_0469 Pichia pastoris GS115 hypothetical protein XP_002489710.1 675818 D 644223 CDS PAS_chr1-1_0070 254565201 8197909 676694..678022 1 NC_012963.1 Steryl ester hydrolase, one of three gene products (Yeh1p, Yeh2p, Tgl1p) 678022 8197909 PAS_chr1-1_0070 Pichia pastoris GS115 Steryl ester hydrolase, one of three gene products (Yeh1p, Yeh2p, Tgl1p) XP_002489711.1 676694 D 644223 CDS PAS_chr1-1_0071 254565203 8197199 complement(678030..679184) 1 NC_012963.1 hypothetical protein 679184 8197199 PAS_chr1-1_0071 Pichia pastoris GS115 hypothetical protein XP_002489712.1 678030 R 644223 CDS PAS_chr1-1_0072 254565205 8197200 680765..681850 1 NC_012963.1 Fructose 1,6-bisphosphate aldolase, required for glycolysis and gluconeogenesis 681850 8197200 PAS_chr1-1_0072 Pichia pastoris GS115 Fructose 1,6-bisphosphate aldolase, required for glycolysis and gluconeogenesis XP_002489713.1 680765 D 644223 CDS PAS_chr1-1_0470 254565207 8197201 682104..684002 1 NC_012963.1 hypothetical protein 684002 8197201 PAS_chr1-1_0470 Pichia pastoris GS115 hypothetical protein XP_002489714.1 682104 D 644223 CDS PAS_chr1-1_0074 254565209 8197910 complement(685383..685727) 1 NC_012963.1 Essential protein of the inner mitochondrial membrane, peripherally localized 685727 8197910 PAS_chr1-1_0074 Pichia pastoris GS115 Essential protein of the inner mitochondrial membrane, peripherally localized XP_002489715.1 685383 R 644223 CDS PAS_chr1-1_0076 254565211 8197202 complement(join(690342..690601,690895..691027)) 1 NC_012963.1 Protein component of the small (40S) ribosomal subunit 691027 8197202 PAS_chr1-1_0076 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002489716.1 690342 R 644223 CDS PAS_chr1-1_0077 254565213 8197203 join(691405..691440,691495..694458) 1 NC_012963.1 hypothetical protein 694458 8197203 PAS_chr1-1_0077 Pichia pastoris GS115 hypothetical protein XP_002489717.1 691405 D 644223 CDS PAS_chr1-1_0078 254565215 8197204 694901..696895 1 NC_012963.1 Regulatory subunit of type 1 protein phosphatase Glc7p 696895 8197204 PAS_chr1-1_0078 Pichia pastoris GS115 Regulatory subunit of type 1 protein phosphatase Glc7p XP_002489718.1 694901 D 644223 CDS PAS_chr1-1_0079 254565217 8197205 697016..698269 1 NC_012963.1 Non-ATPase regulatory subunit of the 26S proteasome 698269 8197205 PAS_chr1-1_0079 Pichia pastoris GS115 Non-ATPase regulatory subunit of the 26S proteasome XP_002489719.1 697016 D 644223 CDS PAS_chr1-1_0080 254565219 8197206 join(698538..699775,699801..700914) 1 NC_012963.1 hypothetical protein 700914 8197206 PAS_chr1-1_0080 Pichia pastoris GS115 hypothetical protein XP_002489720.1 698538 D 644223 CDS PAS_chr1-1_0081 254565221 8197207 complement(700965..701930) 1 NC_012963.1 Mitochondrial inner membrane transporter, transports oxaloacetate, sulfate, and thiosulfate 701930 8197207 PAS_chr1-1_0081 Pichia pastoris GS115 Mitochondrial inner membrane transporter, transports oxaloacetate, sulfate, and thiosulfate XP_002489721.1 700965 R 644223 CDS PAS_chr1-1_0471 254565223 8197208 complement(join(702026..703925,703957..704648)) 1 NC_012963.1 hypothetical protein 704648 8197208 PAS_chr1-1_0471 Pichia pastoris GS115 hypothetical protein XP_002489722.1 702026 R 644223 CDS PAS_chr1-1_0082 254565225 8197911 705086..706075 1 NC_012963.1 RNA-binding protein that carries poly(A)+ mRNA from the nucleus into the cytoplasm 706075 8197911 PAS_chr1-1_0082 Pichia pastoris GS115 RNA-binding protein that carries poly(A)+ mRNA from the nucleus into the cytoplasm XP_002489723.1 705086 D 644223 CDS PAS_chr1-1_0083 254565227 8197209 complement(706450..707946) 1 NC_012963.1 Kinesin-related motor protein involved in mitotic spindle positioning 707946 8197209 PAS_chr1-1_0083 Pichia pastoris GS115 Kinesin-related motor protein involved in mitotic spindle positioning XP_002489724.1 706450 R 644223 CDS PAS_chr1-1_0084 254565229 8197210 708135..709724 1 NC_012963.1 Protein involved in ER-associated protein degradation 709724 8197210 PAS_chr1-1_0084 Pichia pastoris GS115 Protein involved in ER-associated protein degradation XP_002489725.1 708135 D 644223 CDS PAS_chr1-1_0085 254565231 8197211 complement(709895..710554) 1 NC_012963.1 hypothetical protein 710554 8197211 PAS_chr1-1_0085 Pichia pastoris GS115 hypothetical protein XP_002489726.1 709895 R 644223 CDS PAS_chr1-1_0086 254565233 8197212 711683..712639 1 NC_012963.1 Co-chaperone for Hsp40p, anchored in the ER membrane 712639 8197212 PAS_chr1-1_0086 Pichia pastoris GS115 Co-chaperone for Hsp40p, anchored in the ER membrane XP_002489727.1 711683 D 644223 CDS PAS_chr1-1_0087 254565235 8197213 complement(712713..716423) 1 NC_012963.1 ATPase that forms a large complex, containing actin and several actin-related proteins 716423 8197213 PAS_chr1-1_0087 Pichia pastoris GS115 ATPase that forms a large complex, containing actin and several actin-related proteins XP_002489728.1 712713 R 644223 CDS PAS_chr1-1_0088 254565237 8197214 716722..717321 1 NC_012963.1 Essential protein that binds ribosomal protein L11 717321 8197214 PAS_chr1-1_0088 Pichia pastoris GS115 Essential protein that binds ribosomal protein L11 XP_002489729.1 716722 D 644223 CDS PAS_chr1-1_0089 254565239 8197215 717463..718425 1 NC_012963.1 hypothetical protein 718425 8197215 PAS_chr1-1_0089 Pichia pastoris GS115 hypothetical protein XP_002489730.1 717463 D 644223 CDS PAS_chr1-1_0090 254565241 8197216 718642..722394 1 NC_012963.1 hypothetical protein 722394 8197216 PAS_chr1-1_0090 Pichia pastoris GS115 hypothetical protein XP_002489731.1 718642 D 644223 CDS PAS_chr1-1_0091 254565243 8197217 722604..724754 1 NC_012963.1 Protein involved in programmed cell death 724754 8197217 PAS_chr1-1_0091 Pichia pastoris GS115 Protein involved in programmed cell death XP_002489732.1 722604 D 644223 CDS PAS_chr1-1_0092 254565245 8197218 complement(724789..726603) 1 NC_012963.1 hypothetical protein 726603 8197218 PAS_chr1-1_0092 Pichia pastoris GS115 hypothetical protein XP_002489733.1 724789 R 644223 CDS PAS_chr1-1_0093 254565247 8197219 727061..727720 1 NC_012963.1 hypothetical protein 727720 8197219 PAS_chr1-1_0093 Pichia pastoris GS115 hypothetical protein XP_002489734.1 727061 D 644223 CDS PAS_chr1-1_0094 254565249 8197220 728325..728690 1 NC_012963.1 hypothetical protein 728690 8197220 PAS_chr1-1_0094 Pichia pastoris GS115 hypothetical protein XP_002489735.1 728325 D 644223 CDS PAS_chr1-1_0472 254565251 8197221 729044..730765 1 NC_012963.1 hypothetical protein 730765 8197221 PAS_chr1-1_0472 Pichia pastoris GS115 hypothetical protein XP_002489736.1 729044 D 644223 CDS PAS_chr1-1_0095 254565253 8197912 complement(730793..732250) 1 NC_012963.1 Subunit (60 kDa) of TFIID and SAGA complexes 732250 8197912 PAS_chr1-1_0095 Pichia pastoris GS115 Subunit (60 kDa) of TFIID and SAGA complexes XP_002489737.1 730793 R 644223 CDS PAS_chr1-1_0473 254565255 8197222 732675..734528 1 NC_012963.1 hypothetical protein 734528 8197222 PAS_chr1-1_0473 Pichia pastoris GS115 hypothetical protein XP_002489738.1 732675 D 644223 CDS PAS_chr1-1_0096 254565257 8197913 734684..735997 1 NC_012963.1 GTP-binding alpha subunit of the heterotrimeric G protein that couples to pheromone receptors 735997 8197913 PAS_chr1-1_0096 Pichia pastoris GS115 GTP-binding alpha subunit of the heterotrimeric G protein that couples to pheromone receptors XP_002489739.1 734684 D 644223 CDS PAS_chr1-1_0097 254565259 8197223 736360..737103 1 NC_012963.1 Cyclin, interacts with Pho85p cyclin-dependent kinase (Cdk), induced by Gcn4p at level of transcript 737103 8197223 PAS_chr1-1_0097 Pichia pastoris GS115 Cyclin, interacts with Pho85p cyclin-dependent kinase (Cdk), induced by Gcn4p at level of transcript XP_002489740.1 736360 D 644223 CDS PAS_chr1-1_0098 254565261 8197224 complement(737148..737888) 1 NC_012963.1 Mitochondrial ribosomal protein of the small subunit, has similarity to E. coli S7 ribosomal protein 737888 8197224 PAS_chr1-1_0098 Pichia pastoris GS115 Mitochondrial ribosomal protein of the small subunit, has similarity to E. coli S7 ribosomal protein XP_002489741.1 737148 R 644223 CDS PAS_chr1-1_0099 254565263 8197225 complement(738072..739382) 1 NC_012963.1 Core subunit of the ubiquinol-cytochrome c reductase complex (bc1 complex) 739382 8197225 PAS_chr1-1_0099 Pichia pastoris GS115 Core subunit of the ubiquinol-cytochrome c reductase complex (bc1 complex) XP_002489742.1 738072 R 644223 CDS PAS_chr1-1_0100 254565265 8197226 739779..740126 1 NC_012963.1 Mitochondrial ribosomal protein of the small subunit 740126 8197226 PAS_chr1-1_0100 Pichia pastoris GS115 Mitochondrial ribosomal protein of the small subunit XP_002489743.1 739779 D 644223 CDS PAS_chr1-1_0101 254565267 8197227 740817..742283 1 NC_012963.1 hypothetical protein 742283 8197227 PAS_chr1-1_0101 Pichia pastoris GS115 hypothetical protein XP_002489744.1 740817 D 644223 CDS PAS_chr1-1_0102 254565269 8197228 743021..744790 1 NC_012963.1 Histone methyltransferase with a role in transcriptional elongation 744790 8197228 PAS_chr1-1_0102 Pichia pastoris GS115 Histone methyltransferase with a role in transcriptional elongation XP_002489745.1 743021 D 644223 CDS PAS_chr1-1_0103 254565271 8197229 745240..746157 1 NC_012963.1 Chitin deacetylase, together with Cda1p involved in the biosynthesis ascospore wall component 746157 8197229 PAS_chr1-1_0103 Pichia pastoris GS115 Chitin deacetylase, together with Cda1p involved in the biosynthesis ascospore wall component XP_002489746.1 745240 D 644223 CDS PAS_chr1-1_0104 254565273 8197230 complement(746154..746834) 1 NC_012963.1 Putative protein proposed to be involved in the metabolism of purine and pyrimidine base analogues 746834 8197230 PAS_chr1-1_0104 Pichia pastoris GS115 Putative protein proposed to be involved in the metabolism of purine and pyrimidine base analogues XP_002489747.1 746154 R 644223 CDS PAS_chr1-1_0105 254565275 8197231 complement(747000..748916) 1 NC_012963.1 MAP kinase kinase that plays a pivotal role in the osmosensing signal-transduction pathway 748916 8197231 PAS_chr1-1_0105 Pichia pastoris GS115 MAP kinase kinase that plays a pivotal role in the osmosensing signal-transduction pathway XP_002489748.1 747000 R 644223 CDS PAS_chr1-1_0106 254565277 8197232 complement(749263..752181) 1 NC_012963.1 Subunit of the RNA polymerase II mediator complex 752181 8197232 PAS_chr1-1_0106 Pichia pastoris GS115 Subunit of the RNA polymerase II mediator complex XP_002489749.1 749263 R 644223 CDS PAS_chr1-1_0107 254565279 8197233 complement(752478..753851) 1 NC_012963.1 NADP(+)-dependent glutamate dehydrogenase 753851 8197233 PAS_chr1-1_0107 Pichia pastoris GS115 NADP(+)-dependent glutamate dehydrogenase XP_002489750.1 752478 R 644223 CDS PAS_chr1-1_0108 254565281 8197234 complement(754663..755049) 1 NC_012963.1 hypothetical protein 755049 8197234 PAS_chr1-1_0108 Pichia pastoris GS115 hypothetical protein XP_002489751.1 754663 R 644223 CDS PAS_chr1-1_0109 254565283 8197235 complement(755309..756232) 1 NC_012963.1 hypothetical protein 756232 8197235 PAS_chr1-1_0109 Pichia pastoris GS115 hypothetical protein XP_002489752.1 755309 R 644223 CDS PAS_chr1-1_0110 254565285 8197236 complement(756510..757226) 1 NC_012963.1 Mitochondrial matrix protein involved in biogenesis of iron-sulfur (Fe/S) cluster of Fe/S proteins 757226 8197236 PAS_chr1-1_0110 Pichia pastoris GS115 Mitochondrial matrix protein involved in biogenesis of iron-sulfur (Fe/S) cluster of Fe/S proteins XP_002489753.1 756510 R 644223 CDS PAS_chr1-1_0111 254565287 8197237 complement(757456..759591) 1 NC_012963.1 Protein involved in negative regulation of transcription of iron regulon 759591 8197237 PAS_chr1-1_0111 Pichia pastoris GS115 Protein involved in negative regulation of transcription of iron regulon XP_002489754.1 757456 R 644223 CDS PAS_chr1-1_0112 254565289 8197238 760070..762994 1 NC_012963.1 Karyopherin beta, responsible for the import of the Toa1p-Toa2p complex into the nucleus 762994 8197238 PAS_chr1-1_0112 Pichia pastoris GS115 Karyopherin beta, responsible for the import of the Toa1p-Toa2p complex into the nucleus XP_002489755.1 760070 D 644223 CDS PAS_chr1-1_0113 254565291 8197239 complement(763054..764919) 1 NC_012963.1 Subunit of heterotrimeric Replication Protein A (RPA) 764919 8197239 PAS_chr1-1_0113 Pichia pastoris GS115 Subunit of heterotrimeric Replication Protein A (RPA) XP_002489756.1 763054 R 644223 CDS PAS_chr1-1_0114 254565293 8197240 join(765099..765630,765672..766246) 1 NC_012963.1 Putative non-ATPase subunit of the 19S regulatory particle of the 26S proteasome 766246 8197240 PAS_chr1-1_0114 Pichia pastoris GS115 Putative non-ATPase subunit of the 19S regulatory particle of the 26S proteasome XP_002489757.1 765099 D 644223 CDS PAS_chr1-1_0116 254565295 8197241 766329..767240 1 NC_012963.1 Component of the conserved oligomeric Golgi complex (Cog1p through Cog8p) 767240 8197241 PAS_chr1-1_0116 Pichia pastoris GS115 Component of the conserved oligomeric Golgi complex (Cog1p through Cog8p) XP_002489758.1 766329 D 644223 CDS PAS_chr1-1_0117 254565297 8197242 complement(767249..770914) 1 NC_012963.1 Calcium-transporting ATPase 770914 8197242 PAS_chr1-1_0117 Pichia pastoris GS115 Calcium-transporting ATPase XP_002489759.1 767249 R 644223 CDS PAS_chr1-1_0118 254565299 8197243 771452..772678 1 NC_012963.1 hypothetical protein 772678 8197243 PAS_chr1-1_0118 Pichia pastoris GS115 hypothetical protein XP_002489760.1 771452 D 644223 CDS PAS_chr1-1_0474 254565301 8197244 773188..774231 1 NC_012963.1 hypothetical protein 774231 8197244 PAS_chr1-1_0474 Pichia pastoris GS115 hypothetical protein XP_002489761.1 773188 D 644223 CDS PAS_chr1-1_0119 254565303 8197914 774318..776147 1 NC_012963.1 Zinc finger protein 776147 8197914 PAS_chr1-1_0119 Pichia pastoris GS115 Zinc finger protein XP_002489762.1 774318 D 644223 CDS PAS_chr1-1_0120 254565305 8197245 complement(join(776543..779380,779424..780752)) 1 NC_012963.1 Lipid-binding protein, localized to the bud via specific mRNA transport 780752 8197245 PAS_chr1-1_0120 Pichia pastoris GS115 Lipid-binding protein, localized to the bud via specific mRNA transport XP_002489763.1 776543 R 644223 CDS PAS_chr1-1_0475 254565307 8197246 complement(781446..782855) 1 NC_012963.1 hypothetical protein 782855 8197246 PAS_chr1-1_0475 Pichia pastoris GS115 hypothetical protein XP_002489764.1 781446 R 644223 CDS PAS_chr1-1_0122 254565309 8197915 785194..786018 1 NC_012963.1 hypothetical protein 786018 8197915 PAS_chr1-1_0122 Pichia pastoris GS115 hypothetical protein XP_002489765.1 785194 D 644223 CDS PAS_chr1-1_0123 254565311 8197247 complement(786144..789047) 1 NC_012963.1 Putative sensor/transporter protein involved in cell wall biogenesis 789047 8197247 PAS_chr1-1_0123 Pichia pastoris GS115 Putative sensor/transporter protein involved in cell wall biogenesis XP_002489766.1 786144 R 644223 CDS PAS_chr1-1_0124 254565313 8197248 join(789405..789411,789476..789747) 1 NC_012963.1 hypothetical protein 789747 8197248 PAS_chr1-1_0124 Pichia pastoris GS115 hypothetical protein XP_002489767.1 789405 D 644223 CDS PAS_chr1-1_0126 254565315 8197249 complement(790739..791632) 1 NC_012963.1 hypothetical protein 791632 8197249 PAS_chr1-1_0126 Pichia pastoris GS115 hypothetical protein XP_002489768.1 790739 R 644223 CDS PAS_chr1-1_0127 254565317 8197250 791819..792985 1 NC_012963.1 hypothetical protein 792985 8197250 PAS_chr1-1_0127 Pichia pastoris GS115 hypothetical protein XP_002489769.1 791819 D 644223 CDS PAS_chr1-1_0476 254565319 8197251 793399..794463 1 NC_012963.1 hypothetical protein 794463 8197251 PAS_chr1-1_0476 Pichia pastoris GS115 hypothetical protein XP_002489770.1 793399 D 644223 CDS PAS_chr1-1_0128 254565321 8197916 794749..798483 1 NC_012963.1 hypothetical protein 798483 8197916 PAS_chr1-1_0128 Pichia pastoris GS115 hypothetical protein XP_002489771.1 794749 D 644223 CDS PAS_chr1-1_0477 254565323 8197252 798624..799526 1 NC_012963.1 hypothetical protein 799526 8197252 PAS_chr1-1_0477 Pichia pastoris GS115 hypothetical protein XP_002489772.1 798624 D 644223 CDS PAS_chr1-1_0129 254565325 8197917 complement(join(799498..800535,800595..800679,800750..800832)) 1 NC_012963.1 hypothetical protein 800832 8197917 PAS_chr1-1_0129 Pichia pastoris GS115 hypothetical protein XP_002489773.1 799498 R 644223 CDS PAS_chr1-1_0478 254565327 8197253 801087..801668 1 NC_012963.1 hypothetical protein 801668 8197253 PAS_chr1-1_0478 Pichia pastoris GS115 hypothetical protein XP_002489774.1 801087 D 644223 CDS PAS_chr1-1_0130 254565329 8197918 802100..805153 1 NC_012963.1 Daughter cell-specific secreted protein with similarity to glucanases, endo-1,3-beta-glucanase 805153 8197918 PAS_chr1-1_0130 Pichia pastoris GS115 Daughter cell-specific secreted protein with similarity to glucanases, endo-1,3-beta-glucanase XP_002489775.1 802100 D 644223 CDS PAS_chr1-1_0131 254565331 8197254 806430..808640 1 NC_012963.1 General transcriptional co-repressor, acts together with Tup1p 808640 8197254 PAS_chr1-1_0131 Pichia pastoris GS115 General transcriptional co-repressor, acts together with Tup1p XP_002489776.1 806430 D 644223 CDS PAS_chr1-1_0132 254565333 8197255 complement(808686..809609) 1 NC_012963.1 Purine nucleoside phosphorylase, specifically metabolizes inosine & guanosine nucleosides 809609 8197255 PAS_chr1-1_0132 Pichia pastoris GS115 Purine nucleoside phosphorylase, specifically metabolizes inosine & guanosine nucleosides XP_002489777.1 808686 R 644223 CDS PAS_chr1-1_0133 254565335 8197256 809955..810749 1 NC_012963.1 hypothetical protein 810749 8197256 PAS_chr1-1_0133 Pichia pastoris GS115 hypothetical protein XP_002489778.1 809955 D 644223 CDS PAS_chr1-1_0134 254565337 8197257 complement(810830..812179) 1 NC_012963.1 hypothetical protein 812179 8197257 PAS_chr1-1_0134 Pichia pastoris GS115 hypothetical protein XP_002489779.1 810830 R 644223 CDS PAS_chr1-1_0135 254565339 8197258 complement(812397..813197) 1 NC_012963.1 hypothetical protein 813197 8197258 PAS_chr1-1_0135 Pichia pastoris GS115 hypothetical protein XP_002489780.1 812397 R 644223 CDS PAS_chr1-1_0136 254565341 8197259 complement(813744..814484) 1 NC_012963.1 hypothetical protein 814484 8197259 PAS_chr1-1_0136 Pichia pastoris GS115 hypothetical protein XP_002489781.1 813744 R 644223 CDS PAS_chr1-1_0137 254565343 8197260 814798..815118 1 NC_012963.1 hypothetical protein 815118 8197260 PAS_chr1-1_0137 Pichia pastoris GS115 hypothetical protein XP_002489782.1 814798 D 644223 CDS PAS_chr1-1_0138 254565345 8197261 complement(815145..816233) 1 NC_012963.1 Component of the mitochondrial outer membrane sorting and assembly machinery (SAM) complex 816233 8197261 PAS_chr1-1_0138 Pichia pastoris GS115 Component of the mitochondrial outer membrane sorting and assembly machinery (SAM) complex XP_002489783.1 815145 R 644223 CDS PAS_chr1-1_0139 254565347 8197262 816454..820704 1 NC_012963.1 Protein required for accurate chromosome segregation 820704 8197262 PAS_chr1-1_0139 Pichia pastoris GS115 Protein required for accurate chromosome segregation XP_002489784.1 816454 D 644223 CDS PAS_chr1-1_0140 254565349 8197263 complement(820723..822195) 1 NC_012963.1 hypothetical protein 822195 8197263 PAS_chr1-1_0140 Pichia pastoris GS115 hypothetical protein XP_002489785.1 820723 R 644223 CDS PAS_chr1-1_0141 254565351 8197264 complement(822741..823988) 1 NC_012963.1 hypothetical protein 823988 8197264 PAS_chr1-1_0141 Pichia pastoris GS115 hypothetical protein XP_002489786.1 822741 R 644223 CDS PAS_chr1-1_0142 254565353 8197265 825477..827111 1 NC_012963.1 hypothetical protein 827111 8197265 PAS_chr1-1_0142 Pichia pastoris GS115 hypothetical protein XP_002489787.1 825477 D 644223 CDS PAS_chr1-1_0143 254565355 8197266 complement(827139..830495) 1 NC_012963.1 Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease comple 830495 8197266 PAS_chr1-1_0143 Pichia pastoris GS115 Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease comple XP_002489788.1 827139 R 644223 CDS PAS_chr1-1_0144 254565357 8197267 830704..830946 1 NC_012963.1 Homolog of the prokaryotic ribosomal protein L36 830946 8197267 PAS_chr1-1_0144 Pichia pastoris GS115 Homolog of the prokaryotic ribosomal protein L36 XP_002489789.1 830704 D 644223 CDS PAS_chr1-1_0145 254565359 8197580 complement(831016..834081) 1 NC_012963.1 Cytoplasmic protein with a role in regulation of Ty1 transposition 834081 8197580 PAS_chr1-1_0145 Pichia pastoris GS115 Cytoplasmic protein with a role in regulation of Ty1 transposition XP_002489790.1 831016 R 644223 CDS PAS_chr1-1_0146 254565361 8196650 834752..835702 1 NC_012963.1 hypothetical protein 835702 8196650 PAS_chr1-1_0146 Pichia pastoris GS115 hypothetical protein XP_002489791.1 834752 D 644223 CDS PAS_chr1-1_0147 254565363 8196651 836042..837370 1 NC_012963.1 Putative mannosidase, essential glycosylphosphatidylinositol (GPI)-anchored membrane protein 837370 8196651 PAS_chr1-1_0147 Pichia pastoris GS115 Putative mannosidase, essential glycosylphosphatidylinositol (GPI)-anchored membrane protein XP_002489792.1 836042 D 644223 CDS PAS_chr1-1_0148 254565365 8196652 complement(837377..838339) 1 NC_012963.1 hypothetical protein 838339 8196652 PAS_chr1-1_0148 Pichia pastoris GS115 hypothetical protein XP_002489793.1 837377 R 644223 CDS PAS_chr1-1_0149 254565367 8196653 838579..839787 1 NC_012963.1 hypothetical protein 839787 8196653 PAS_chr1-1_0149 Pichia pastoris GS115 hypothetical protein XP_002489794.1 838579 D 644223 CDS PAS_chr1-1_0150 254565369 8196654 839979..841685 1 NC_012963.1 Protein of the Sec1p/Munc-18 family, essential for vacuolar protein sorting 841685 8196654 PAS_chr1-1_0150 Pichia pastoris GS115 Protein of the Sec1p/Munc-18 family, essential for vacuolar protein sorting XP_002489795.1 839979 D 644223 CDS PAS_chr1-1_0151 254565371 8196655 complement(841716..842888) 1 NC_012963.1 Protein that relieves transcriptional repression by binding to the Cyc8p-Tup1p corepressor 842888 8196655 PAS_chr1-1_0151 Pichia pastoris GS115 Protein that relieves transcriptional repression by binding to the Cyc8p-Tup1p corepressor XP_002489796.1 841716 R 644223 CDS PAS_chr1-1_0152 254565373 8196656 843051..844325 1 NC_012963.1 Cytochrome c lysine methyltransferase, trimethylates residue 72 of apo-cytochrome c (Cyc1p) 844325 8196656 PAS_chr1-1_0152 Pichia pastoris GS115 Cytochrome c lysine methyltransferase, trimethylates residue 72 of apo-cytochrome c (Cyc1p) XP_002489797.1 843051 D 644223 CDS PAS_chr1-1_0153 254565375 8196657 complement(844397..845878) 1 NC_012963.1 Serine/threonine protein phosphatase Z, isoform of Ppz2p 845878 8196657 PAS_chr1-1_0153 Pichia pastoris GS115 Serine/threonine protein phosphatase Z, isoform of Ppz2p XP_002489798.1 844397 R 644223 CDS PAS_chr1-1_0154 254565377 8196658 846328..847173 1 NC_012963.1 Small subunit of the heterodimeric cap binding complex that also contains Sto1p 847173 8196658 PAS_chr1-1_0154 Pichia pastoris GS115 Small subunit of the heterodimeric cap binding complex that also contains Sto1p XP_002489799.1 846328 D 644223 CDS PAS_chr1-1_0155 254565379 8196659 complement(847178..847840) 1 NC_012963.1 Nuclear thiol peroxidase, functions as an alkyl-hydroperoxide reductase during post-diauxic growth 847840 8196659 PAS_chr1-1_0155 Pichia pastoris GS115 Nuclear thiol peroxidase, functions as an alkyl-hydroperoxide reductase during post-diauxic growth XP_002489800.1 847178 R 644223 CDS PAS_chr1-1_0156 254565381 8196660 848045..850900 1 NC_012963.1 hypothetical protein 850900 8196660 PAS_chr1-1_0156 Pichia pastoris GS115 hypothetical protein XP_002489801.1 848045 D 644223 CDS PAS_chr1-1_0157 254565383 8196661 complement(850897..851604) 1 NC_012963.1 hypothetical protein 851604 8196661 PAS_chr1-1_0157 Pichia pastoris GS115 hypothetical protein XP_002489802.1 850897 R 644223 CDS PAS_chr1-1_0158 254565385 8196662 852641..853432 1 NC_012963.1 Putative transmembrane protein involved in export of ammonia, a starvation signal 853432 8196662 PAS_chr1-1_0158 Pichia pastoris GS115 Putative transmembrane protein involved in export of ammonia, a starvation signal XP_002489803.1 852641 D 644223 CDS PAS_chr1-1_0479 254565387 8196663 854395..855006 1 NC_012963.1 hypothetical protein 855006 8196663 PAS_chr1-1_0479 Pichia pastoris GS115 hypothetical protein XP_002489804.1 854395 D 644223 CDS PAS_chr1-1_0159 254565389 8197919 855244..856164 1 NC_012963.1 hypothetical protein 856164 8197919 PAS_chr1-1_0159 Pichia pastoris GS115 hypothetical protein XP_002489805.1 855244 D 644223 CDS PAS_chr1-1_0160 254565391 8196664 complement(856216..857325) 1 NC_012963.1 Protein disulfide isomerase, multifunctional protein resident in the endoplasmic reticulum lumen 857325 8196664 PAS_chr1-1_0160 Pichia pastoris GS115 Protein disulfide isomerase, multifunctional protein resident in the endoplasmic reticulum lumen XP_002489806.1 856216 R 644223 CDS PAS_chr1-1_0161 254565393 8196665 858046..861792 1 NC_012963.1 N-glycosylated protein involved in the maintenance of bud site selection during bipolar budding 861792 8196665 PAS_chr1-1_0161 Pichia pastoris GS115 N-glycosylated protein involved in the maintenance of bud site selection during bipolar budding XP_002489807.1 858046 D 644223 CDS PAS_chr1-1_0162 254565395 8196666 complement(861891..863927) 1 NC_012963.1 hypothetical protein 863927 8196666 PAS_chr1-1_0162 Pichia pastoris GS115 hypothetical protein XP_002489808.1 861891 R 644223 CDS PAS_chr1-1_0163 254565397 8196667 864097..865023 1 NC_012963.1 Deoxycytidine monophosphate (dCMP) deaminase required for dCTP and dTTP synthesis 865023 8196667 PAS_chr1-1_0163 Pichia pastoris GS115 Deoxycytidine monophosphate (dCMP) deaminase required for dCTP and dTTP synthesis XP_002489809.1 864097 D 644223 CDS PAS_chr1-1_0164 254565399 8196668 complement(865053..865757) 1 NC_012963.1 Putative protein of fumarylacetoacetate hydrolase family protein 865757 8196668 PAS_chr1-1_0164 Pichia pastoris GS115 Putative protein of fumarylacetoacetate hydrolase family protein XP_002489810.1 865053 R 644223 CDS PAS_chr1-1_0165 254565401 8196669 complement(865942..867216) 1 NC_012963.1 hypothetical protein 867216 8196669 PAS_chr1-1_0165 Pichia pastoris GS115 hypothetical protein XP_002489811.1 865942 R 644223 CDS PAS_chr1-1_0166 254565403 8196670 complement(867713..867934) 1 NC_012963.1 RNA polymerase subunit, found in RNA polymerase complexes I, II, and III 867934 8196670 PAS_chr1-1_0166 Pichia pastoris GS115 RNA polymerase subunit, found in RNA polymerase complexes I, II, and III XP_002489812.1 867713 R 644223 CDS PAS_chr1-1_0167 254565405 8196671 868096..869874 1 NC_012963.1 Peripheral mitochondrial inner membrane protein, located on the matrix face of the membrane 869874 8196671 PAS_chr1-1_0167 Pichia pastoris GS115 Peripheral mitochondrial inner membrane protein, located on the matrix face of the membrane XP_002489813.1 868096 D 644223 CDS PAS_chr1-1_0168 254565407 8196672 complement(869930..873784) 1 NC_012963.1 Vacuolar membrane protein that transits through the biosynthetic vacuolar protein sorting pathway 873784 8196672 PAS_chr1-1_0168 Pichia pastoris GS115 Vacuolar membrane protein that transits through the biosynthetic vacuolar protein sorting pathway XP_002489814.1 869930 R 644223 CDS PAS_chr1-1_0169 254565409 8196673 873979..874668 1 NC_012963.1 Protein required for the ubiquinone (Coenzyme Q) biosynthesis 874668 8196673 PAS_chr1-1_0169 Pichia pastoris GS115 Protein required for the ubiquinone (Coenzyme Q) biosynthesis XP_002489815.1 873979 D 644223 CDS PAS_chr1-1_0170 254565411 8196674 complement(874716..875288) 1 NC_012963.1 N-myristoylated calcium-binding protein that may have a role in intracellular signaling 875288 8196674 PAS_chr1-1_0170 Pichia pastoris GS115 N-myristoylated calcium-binding protein that may have a role in intracellular signaling XP_002489816.1 874716 R 644223 CDS PAS_chr1-1_0171 254565413 8196675 complement(875528..876658) 1 NC_012963.1 Negative regulator of the glucose-sensing signal transduction pathway 876658 8196675 PAS_chr1-1_0171 Pichia pastoris GS115 Negative regulator of the glucose-sensing signal transduction pathway XP_002489817.1 875528 R 644223 CDS PAS_chr1-1_0172 254565415 8196676 877062..877409 1 NC_012963.1 hypothetical protein 877409 8196676 PAS_chr1-1_0172 Pichia pastoris GS115 hypothetical protein XP_002489818.1 877062 D 644223 CDS PAS_chr1-1_0173 254565417 8196677 877907..878257 1 NC_012963.1 hypothetical protein 878257 8196677 PAS_chr1-1_0173 Pichia pastoris GS115 hypothetical protein XP_002489819.1 877907 D 644223 CDS PAS_chr1-1_0174 254565419 8196678 878491..881691 1 NC_012963.1 ATP-dependent Lon protease involved in degradation of misfolded proteins in mitochondria 881691 8196678 PAS_chr1-1_0174 Pichia pastoris GS115 ATP-dependent Lon protease involved in degradation of misfolded proteins in mitochondria XP_002489820.1 878491 D 644223 CDS PAS_chr1-1_0175 254565421 8196679 complement(join(882178..882824,882919..883015)) 1 NC_012963.1 hypothetical protein 883015 8196679 PAS_chr1-1_0175 Pichia pastoris GS115 hypothetical protein XP_002489821.1 882178 R 644223 CDS PAS_chr1-1_0176 254565423 8196680 883990..886440 1 NC_012963.1 Putative FAD transporter 886440 8196680 PAS_chr1-1_0176 Pichia pastoris GS115 Putative FAD transporter XP_002489822.1 883990 D 644223 CDS PAS_chr1-1_0177 254565425 8196681 complement(886481..887704) 1 NC_012963.1 hypothetical protein 887704 8196681 PAS_chr1-1_0177 Pichia pastoris GS115 hypothetical protein XP_002489823.1 886481 R 644223 CDS PAS_chr1-1_0178 254565427 8196682 complement(887824..888912) 1 NC_012963.1 hypothetical protein 888912 8196682 PAS_chr1-1_0178 Pichia pastoris GS115 hypothetical protein XP_002489824.1 887824 R 644223 CDS PAS_chr1-1_0179 254565429 8196683 889222..892794 1 NC_012963.1 Essential conserved nucleolar GTP-binding protein required for synthesis of 40S ribosomal subunits 892794 8196683 PAS_chr1-1_0179 Pichia pastoris GS115 Essential conserved nucleolar GTP-binding protein required for synthesis of 40S ribosomal subunits XP_002489825.1 889222 D 644223 CDS PAS_chr1-1_0180 254565431 8196684 complement(join(892887..893440,893518..893536)) 1 NC_012963.1 GTPase; GTP-binding protein of the ARF family, component of COPII coat of vesicles 893536 8196684 PAS_chr1-1_0180 Pichia pastoris GS115 GTPase; GTP-binding protein of the ARF family, component of COPII coat of vesicles XP_002489826.1 892887 R 644223 CDS PAS_chr1-1_0181 254565433 8196685 894003..896714 1 NC_012963.1 Essential beta'-coat protein of the COPI coatomer, involved in ER-to-Golgi and Golgi-to-ER transport 896714 8196685 PAS_chr1-1_0181 Pichia pastoris GS115 Essential beta'-coat protein of the COPI coatomer, involved in ER-to-Golgi and Golgi-to-ER transport XP_002489827.1 894003 D 644223 CDS PAS_chr1-1_0182 254565435 8196686 complement(join(896767..897000,897061..897723)) 1 NC_012963.1 Mitochondrial 2' O-ribose methyltransferase, required for methylation of U(2791) in 21S rRNA 897723 8196686 PAS_chr1-1_0182 Pichia pastoris GS115 Mitochondrial 2' O-ribose methyltransferase, required for methylation of U(2791) in 21S rRNA XP_002489828.1 896767 R 644223 CDS PAS_chr1-1_0183 254565437 8196687 897993..898646 1 NC_012963.1 N-terminally acetylated protein component of the large (60S) ribosomal subunit 898646 8196687 PAS_chr1-1_0183 Pichia pastoris GS115 N-terminally acetylated protein component of the large (60S) ribosomal subunit XP_002489829.1 897993 D 644223 CDS PAS_chr1-1_0480 254565439 8196688 898818..900506 1 NC_012963.1 hypothetical protein 900506 8196688 PAS_chr1-1_0480 Pichia pastoris GS115 hypothetical protein XP_002489830.1 898818 D 644223 CDS PAS_chr1-1_0184 254565441 8197920 900834..902810 1 NC_012963.1 Gamma glutamylcysteine synthetase catalyzes the first step in glutathione (GSH) biosynthesis 902810 8197920 PAS_chr1-1_0184 Pichia pastoris GS115 Gamma glutamylcysteine synthetase catalyzes the first step in glutathione (GSH) biosynthesis XP_002489831.1 900834 D 644223 CDS PAS_chr1-1_0185 254565443 8196689 complement(join(902874..903359,903422..903430)) 1 NC_012963.1 hypothetical protein 903430 8196689 PAS_chr1-1_0185 Pichia pastoris GS115 hypothetical protein XP_002489832.1 902874 R 644223 CDS PAS_chr1-1_0186 254565445 8196690 904477..906480 1 NC_012963.1 Putative GTPase involved in 60S ribosomal subunit biogenesis 906480 8196690 PAS_chr1-1_0186 Pichia pastoris GS115 Putative GTPase involved in 60S ribosomal subunit biogenesis XP_002489833.1 904477 D 644223 CDS PAS_chr1-1_0481 254565447 8196691 906988..907809 1 NC_012963.1 hypothetical protein 907809 8196691 PAS_chr1-1_0481 Pichia pastoris GS115 hypothetical protein XP_002489834.1 906988 D 644223 CDS PAS_chr1-1_0187 254565449 8197921 complement(907810..922662) 1 NC_012963.1 Huge dynein-related AAA-type ATPase (midasin), forms extended pre-60S particle with the Rix1 complex 922662 8197921 PAS_chr1-1_0187 Pichia pastoris GS115 Huge dynein-related AAA-type ATPase (midasin), forms extended pre-60S particle with the Rix1 complex XP_002489835.1 907810 R 644223 CDS PAS_chr1-1_0189 254565451 8196692 complement(923508..924005) 1 NC_012963.1 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl12Ap 924005 8196692 PAS_chr1-1_0189 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl12Ap XP_002489836.1 923508 R 644223 CDS PAS_chr1-1_0190 254565453 8196693 complement(924624..926897) 1 NC_012963.1 Non-catalytic subunit of N-terminal acetyltransferase of the NatC type 926897 8196693 PAS_chr1-1_0190 Pichia pastoris GS115 Non-catalytic subunit of N-terminal acetyltransferase of the NatC type XP_002489837.1 924624 R 644223 CDS PAS_chr1-1_0191 254565455 8196694 complement(927249..927866) 1 NC_012963.1 Subunit 5 of the stator stalk of mitochondrial F1F0 ATP synthase 927866 8196694 PAS_chr1-1_0191 Pichia pastoris GS115 Subunit 5 of the stator stalk of mitochondrial F1F0 ATP synthase XP_002489838.1 927249 R 644223 CDS PAS_chr1-1_0192 254565457 8196695 928103..929236 1 NC_012963.1 Mitochondrial ribosomal protein of the large subunit, has similarity to E. coli L2 ribosomal protein 929236 8196695 PAS_chr1-1_0192 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit, has similarity to E. coli L2 ribosomal protein XP_002489839.1 928103 D 644223 CDS PAS_chr1-1_0193 254565459 8196696 complement(929287..929838) 1 NC_012963.1 hypothetical protein 929838 8196696 PAS_chr1-1_0193 Pichia pastoris GS115 hypothetical protein XP_002489840.1 929287 R 644223 CDS PAS_chr1-1_0194 254565461 8196697 complement(929927..931159) 1 NC_012963.1 hypothetical protein 931159 8196697 PAS_chr1-1_0194 Pichia pastoris GS115 hypothetical protein XP_002489841.1 929927 R 644223 CDS PAS_chr1-1_0195 254565463 8196698 complement(join(931372..932227,932307..932326)) 1 NC_012963.1 Subunit D of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) 932326 8196698 PAS_chr1-1_0195 Pichia pastoris GS115 Subunit D of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) XP_002489842.1 931372 R 644223 CDS PAS_chr1-1_0196 254565465 8196699 932568..934997 1 NC_012963.1 Component of the spliceosome complex involved in pre-mRNA splicing 934997 8196699 PAS_chr1-1_0196 Pichia pastoris GS115 Component of the spliceosome complex involved in pre-mRNA splicing XP_002489843.1 932568 D 644223 CDS PAS_chr1-1_0197 254565467 8196700 complement(935036..936538) 1 NC_012963.1 Conserved protein that may act as a chaperone in the degradation of cytochrome c oxidase subunits 936538 8196700 PAS_chr1-1_0197 Pichia pastoris GS115 Conserved protein that may act as a chaperone in the degradation of cytochrome c oxidase subunits XP_002489844.1 935036 R 644223 CDS PAS_chr1-1_0198 254565469 8196701 complement(936662..938275) 1 NC_012963.1 hypothetical protein 938275 8196701 PAS_chr1-1_0198 Pichia pastoris GS115 hypothetical protein XP_002489845.1 936662 R 644223 CDS PAS_chr1-1_0199 254565471 8196702 938670..940766 1 NC_012963.1 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA 940766 8196702 PAS_chr1-1_0199 Pichia pastoris GS115 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA XP_002489846.1 938670 D 644223 CDS PAS_chr1-1_0482 254565473 8196703 941041..941709 1 NC_012963.1 hypothetical protein 941709 8196703 PAS_chr1-1_0482 Pichia pastoris GS115 hypothetical protein XP_002489847.1 941041 D 644223 CDS PAS_chr1-1_0200 254565475 8197922 942426..943706 1 NC_012963.1 Cytosolic aspartate aminotransferase; involved in nitrogen metabolism 943706 8197922 PAS_chr1-1_0200 Pichia pastoris GS115 Cytosolic aspartate aminotransferase; involved in nitrogen metabolism XP_002489848.1 942426 D 644223 CDS PAS_chr1-1_0201 254565477 8196704 complement(943802..944914) 1 NC_012963.1 G protein beta subunit, forms a dimer with Ste18p to activate the mating signaling pathway 944914 8196704 PAS_chr1-1_0201 Pichia pastoris GS115 G protein beta subunit, forms a dimer with Ste18p to activate the mating signaling pathway XP_002489849.1 943802 R 644223 CDS PAS_chr1-1_0483 254565479 8196705 complement(945238..949854) 1 NC_012963.1 hypothetical protein 949854 8196705 PAS_chr1-1_0483 Pichia pastoris GS115 hypothetical protein XP_002489850.1 945238 R 644223 CDS PAS_chr1-1_0202 254565481 8197923 complement(950205..951569) 1 NC_012963.1 Subunit of the RNA polymerase II mediator complex 951569 8197923 PAS_chr1-1_0202 Pichia pastoris GS115 Subunit of the RNA polymerase II mediator complex XP_002489851.1 950205 R 644223 CDS PAS_chr1-1_0203 254565483 8196706 complement(951929..953710) 1 NC_012963.1 General amino acid permease 953710 8196706 PAS_chr1-1_0203 Pichia pastoris GS115 General amino acid permease XP_002489852.1 951929 R 644223 CDS PAS_chr1-1_0204 254565485 8196707 complement(join(953823..954561,954656..954729)) 1 NC_012963.1 hypothetical protein 954729 8196707 PAS_chr1-1_0204 Pichia pastoris GS115 hypothetical protein XP_002489853.1 953823 R 644223 CDS PAS_chr1-1_0205 254565487 8196708 complement(join(954946..955153,955206..955348)) 1 NC_012963.1 hypothetical protein 955348 8196708 PAS_chr1-1_0205 Pichia pastoris GS115 hypothetical protein XP_002489854.1 954946 R 644223 CDS PAS_chr1-1_0206 254565489 8196709 join(955547..955550,955564..956540) 1 NC_012963.1 Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lys 4 956540 8196709 PAS_chr1-1_0206 Pichia pastoris GS115 Subunit of the COMPASS (Set1C) complex, which methylates histone H3 on lys 4 XP_002489855.1 955547 D 644223 CDS PAS_chr1-1_0207 254565491 8196710 complement(956552..958732) 1 NC_012963.1 Hexameric DNA polymerase alpha-associated DNA helicase A involved in lagging strand DNA synthesis 958732 8196710 PAS_chr1-1_0207 Pichia pastoris GS115 Hexameric DNA polymerase alpha-associated DNA helicase A involved in lagging strand DNA synthesis XP_002489856.1 956552 R 644223 CDS PAS_chr1-1_0484 254565493 8196711 complement(959059..959586) 1 NC_012963.1 hypothetical protein 959586 8196711 PAS_chr1-1_0484 Pichia pastoris GS115 hypothetical protein XP_002489857.1 959059 R 644223 CDS PAS_chr1-1_0208 254565495 8197924 join(959934..959999,960117..960221) 1 NC_012963.1 hypothetical protein 960221 8197924 PAS_chr1-1_0208 Pichia pastoris GS115 hypothetical protein XP_002489858.1 959934 D 644223 CDS PAS_chr1-1_0209 254565497 8196712 complement(join(961445..961988,962034..962062)) 1 NC_012963.1 hypothetical protein 962062 8196712 PAS_chr1-1_0209 Pichia pastoris GS115 hypothetical protein XP_002489859.1 961445 R 644223 CDS PAS_chr1-1_0210 254565499 8196713 963731..964837 1 NC_012963.1 hypothetical protein 964837 8196713 PAS_chr1-1_0210 Pichia pastoris GS115 hypothetical protein XP_002489860.1 963731 D 644223 CDS PAS_chr1-1_0211 254565501 8196714 965178..974564 1 NC_012963.1 Putative vacuolar protein sorting-associated protein vps13 974564 8196714 PAS_chr1-1_0211 Pichia pastoris GS115 Putative vacuolar protein sorting-associated protein vps13 XP_002489861.1 965178 D 644223 CDS PAS_chr1-1_0212 254565503 8196715 complement(974559..975671) 1 NC_012963.1 Methionyl-tRNA formyltransferase, catalyzes the formylation of initiator Met-tRNA in mitochondria 975671 8196715 PAS_chr1-1_0212 Pichia pastoris GS115 Methionyl-tRNA formyltransferase, catalyzes the formylation of initiator Met-tRNA in mitochondria XP_002489862.1 974559 R 644223 CDS PAS_chr1-1_0213 254565505 8196716 975802..977469 1 NC_012963.1 hypothetical protein 977469 8196716 PAS_chr1-1_0213 Pichia pastoris GS115 hypothetical protein XP_002489863.1 975802 D 644223 CDS PAS_chr1-1_0214 254565507 8196717 977515..978297 1 NC_012963.1 hypothetical protein 978297 8196717 PAS_chr1-1_0214 Pichia pastoris GS115 hypothetical protein XP_002489864.1 977515 D 644223 CDS PAS_chr1-1_0485 254565509 8196718 978460..979251 1 NC_012963.1 hypothetical protein 979251 8196718 PAS_chr1-1_0485 Pichia pastoris GS115 hypothetical protein XP_002489865.1 978460 D 644223 CDS PAS_chr1-1_0215 254565511 8197925 979497..981911 1 NC_012963.1 Processing alpha glucosidase I, ER type II integral membrane N-glycoprotein 981911 8197925 PAS_chr1-1_0215 Pichia pastoris GS115 Processing alpha glucosidase I, ER type II integral membrane N-glycoprotein XP_002489866.1 979497 D 644223 CDS PAS_chr1-1_0216 254565513 8196719 join(983002..983004,983145..983873) 1 NC_012963.1 Ribosomal protein L4 of the large (60S) ribosomal subunit, nearly identical to Rpl8Ap 983873 8196719 PAS_chr1-1_0216 Pichia pastoris GS115 Ribosomal protein L4 of the large (60S) ribosomal subunit, nearly identical to Rpl8Ap XP_002489867.1 983002 D 644223 CDS PAS_chr1-1_0217 254565515 8196720 complement(984055..984564) 1 NC_012963.1 hypothetical protein 984564 8196720 PAS_chr1-1_0217 Pichia pastoris GS115 hypothetical protein XP_002489868.1 984055 R 644223 CDS PAS_chr1-1_0218 254565517 8196721 985315..986358 1 NC_012963.1 hypothetical protein 986358 8196721 PAS_chr1-1_0218 Pichia pastoris GS115 hypothetical protein XP_002489869.1 985315 D 644223 CDS PAS_chr1-1_0219 254565519 8196722 join(986635..986638,986699..987459) 1 NC_012963.1 Protein component of the large (60S) ribosomal subunit, identical to Rpl2Bp 987459 8196722 PAS_chr1-1_0219 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit, identical to Rpl2Bp XP_002489870.1 986635 D 644223 CDS PAS_chr1-1_0220 254565521 8196723 987880..992796 1 NC_012963.1 Transporter of the ATP-binding cassette (ABC) family involved in bile acid transport 992796 8196723 PAS_chr1-1_0220 Pichia pastoris GS115 Transporter of the ATP-binding cassette (ABC) family involved in bile acid transport XP_002489871.1 987880 D 644223 CDS PAS_chr1-1_0221 254565523 8196724 complement(992846..994540) 1 NC_012963.1 Low affinity methionine permease, similar to Mup1p 994540 8196724 PAS_chr1-1_0221 Pichia pastoris GS115 Low affinity methionine permease, similar to Mup1p XP_002489872.1 992846 R 644223 CDS PAS_chr1-1_0223 254565525 8196725 995958..996467 1 NC_012963.1 hypothetical protein 996467 8196725 PAS_chr1-1_0223 Pichia pastoris GS115 hypothetical protein XP_002489873.1 995958 D 644223 CDS PAS_chr1-1_0224 254565527 8196726 complement(996526..997488) 1 NC_012963.1 Nuclear pore protein that is part of the evolutionarily conserved Nup84p complex 997488 8196726 PAS_chr1-1_0224 Pichia pastoris GS115 Nuclear pore protein that is part of the evolutionarily conserved Nup84p complex XP_002489874.1 996526 R 644223 CDS PAS_chr1-1_0225 254565529 8196727 complement(997606..999330) 1 NC_012963.1 hypothetical protein 999330 8196727 PAS_chr1-1_0225 Pichia pastoris GS115 hypothetical protein XP_002489875.1 997606 R 644223 CDS PAS_chr1-1_0226 254565531 8196728 complement(999638..1001317) 1 NC_012963.1 Vacuolar proteinase B (yscB), a serine protease of the subtilisin family 1001317 8196728 PAS_chr1-1_0226 Pichia pastoris GS115 Vacuolar proteinase B (yscB), a serine protease of the subtilisin family XP_002489876.1 999638 R 644223 CDS PAS_chr1-1_0227 254565533 8196729 complement(1001640..1003037) 1 NC_012963.1 Nuclear pore-associated protein, forms a complex with Sac3p 1003037 8196729 PAS_chr1-1_0227 Pichia pastoris GS115 Nuclear pore-associated protein, forms a complex with Sac3p XP_002489877.1 1001640 R 644223 CDS PAS_chr1-1_0228 254565535 8196730 1003382..1004347 1 NC_012963.1 hypothetical protein 1004347 8196730 PAS_chr1-1_0228 Pichia pastoris GS115 hypothetical protein XP_002489878.1 1003382 D 644223 CDS PAS_chr1-1_0229 254565537 8196731 1004424..1005269 1 NC_012963.1 hypothetical protein 1005269 8196731 PAS_chr1-1_0229 Pichia pastoris GS115 hypothetical protein XP_002489879.1 1004424 D 644223 CDS PAS_chr1-1_0230 254565539 8196732 complement(1005230..1006174) 1 NC_012963.1 tRNA methyltransferase, methylates the N-1 position of guanosine in tRNAs 1006174 8196732 PAS_chr1-1_0230 Pichia pastoris GS115 tRNA methyltransferase, methylates the N-1 position of guanosine in tRNAs XP_002489880.1 1005230 R 644223 CDS PAS_chr1-1_0231 254565541 8196733 1006580..1007563 1 NC_012963.1 hypothetical protein 1007563 8196733 PAS_chr1-1_0231 Pichia pastoris GS115 hypothetical protein XP_002489881.1 1006580 D 644223 CDS PAS_chr1-1_0232 254565543 8196734 1007850..1010939 1 NC_012963.1 Subunit of the nuclear pore complex (NPC) that is localized to both sides of the pore 1010939 8196734 PAS_chr1-1_0232 Pichia pastoris GS115 Subunit of the nuclear pore complex (NPC) that is localized to both sides of the pore XP_002489882.1 1007850 D 644223 CDS PAS_chr1-1_0233 254565545 8196735 1011140..1012453 1 NC_012963.1 Mitochondrial NADP-specific isocitrate dehydrogenase, catalyzes the oxidation of isocitrate 1012453 8196735 PAS_chr1-1_0233 Pichia pastoris GS115 Mitochondrial NADP-specific isocitrate dehydrogenase, catalyzes the oxidation of isocitrate XP_002489883.1 1011140 D 644223 CDS PAS_chr1-1_0234 254565547 8196736 complement(join(1012542..1012682,1012735..1012899)) 1 NC_012963.1 hypothetical protein 1012899 8196736 PAS_chr1-1_0234 Pichia pastoris GS115 hypothetical protein XP_002489884.1 1012542 R 644223 CDS PAS_chr1-1_0235 254565549 8196737 1013304..1014611 1 NC_012963.1 Protein binding phosphatidylinositol 3-phosphate 1014611 8196737 PAS_chr1-1_0235 Pichia pastoris GS115 Protein binding phosphatidylinositol 3-phosphate XP_002489885.1 1013304 D 644223 CDS PAS_chr1-1_0236 254565551 8196738 complement(1014950..1015525) 1 NC_012963.1 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl9Ap 1015525 8196738 PAS_chr1-1_0236 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl9Ap XP_002489886.1 1014950 R 644223 CDS PAS_chr1-1_0237 254565553 8196739 complement(1015708..1016826) 1 NC_012963.1 Nucleotide exchange factor for the endoplasmic reticulum (ER) lumenal Hsp70 chaperone Kar2p 1016826 8196739 PAS_chr1-1_0237 Pichia pastoris GS115 Nucleotide exchange factor for the endoplasmic reticulum (ER) lumenal Hsp70 chaperone Kar2p XP_002489887.1 1015708 R 644223 CDS PAS_chr1-1_0238 254565555 8196740 complement(1016989..1020018) 1 NC_012963.1 Protein whose overexpression affects chromosome stability, potential Cdc28p substrate 1020018 8196740 PAS_chr1-1_0238 Pichia pastoris GS115 Protein whose overexpression affects chromosome stability, potential Cdc28p substrate XP_002489888.1 1016989 R 644223 CDS PAS_chr1-1_0239 254565557 8196741 1020158..1021174 1 NC_012963.1 Protein required, with Elongator complex, Kti11p & Kti12p, for modification of wobble nucleosides in 1021174 8196741 PAS_chr1-1_0239 Pichia pastoris GS115 Protein required, with Elongator complex, Kti11p & Kti12p, for modification of wobble nucleosides in XP_002489889.1 1020158 D 644223 CDS PAS_chr1-1_0486 254565559 8196742 1021517..1022125 1 NC_012963.1 hypothetical protein 1022125 8196742 PAS_chr1-1_0486 Pichia pastoris GS115 hypothetical protein XP_002489890.1 1021517 D 644223 CDS PAS_chr1-1_0240 254565561 8197926 complement(1022304..1022498) 1 NC_012963.1 hypothetical protein 1022498 8197926 PAS_chr1-1_0240 Pichia pastoris GS115 hypothetical protein XP_002489891.1 1022304 R 644223 CDS PAS_chr1-1_0241 254565563 8196743 1022923..1024443 1 NC_012963.1 Mitochondrial glutamyl-tRNA synthetase, encoded by a nuclear gene 1024443 8196743 PAS_chr1-1_0241 Pichia pastoris GS115 Mitochondrial glutamyl-tRNA synthetase, encoded by a nuclear gene XP_002489892.1 1022923 D 644223 CDS PAS_chr1-1_0242 254565565 8196744 complement(1024469..1026355) 1 NC_012963.1 DNA Topoisomerase III, conserved protein that functions in a complex with Sgs1p and Rmi1p 1026355 8196744 PAS_chr1-1_0242 Pichia pastoris GS115 DNA Topoisomerase III, conserved protein that functions in a complex with Sgs1p and Rmi1p XP_002489893.1 1024469 R 644223 CDS PAS_chr1-1_0243 254565567 8196745 1026666..1027490 1 NC_012963.1 Lipoyl ligase, involved in the modification of mitochondrial enzymes 1027490 8196745 PAS_chr1-1_0243 Pichia pastoris GS115 Lipoyl ligase, involved in the modification of mitochondrial enzymes XP_002489894.1 1026666 D 644223 CDS PAS_chr1-1_0244 254565569 8196746 complement(1027487..1029889) 1 NC_012963.1 hypothetical protein 1029889 8196746 PAS_chr1-1_0244 Pichia pastoris GS115 hypothetical protein XP_002489895.1 1027487 R 644223 CDS PAS_chr1-1_0245 254565571 8196747 1030218..1033514 1 NC_012963.1 Structural maintenance of chromosomes (SMC) protein 1033514 8196747 PAS_chr1-1_0245 Pichia pastoris GS115 Structural maintenance of chromosomes (SMC) protein XP_002489896.1 1030218 D 644223 CDS PAS_chr1-1_0246 254565573 8196748 1033646..1034407 1 NC_012963.1 hypothetical protein 1034407 8196748 PAS_chr1-1_0246 Pichia pastoris GS115 hypothetical protein XP_002489897.1 1033646 D 644223 CDS PAS_chr1-1_0247 254565575 8196749 complement(1034404..1035741) 1 NC_012963.1 Subunit of both the Mdm10-Mdm12-Mmm1 complex and the mitochondrial sorting and assembly machinery 1035741 8196749 PAS_chr1-1_0247 Pichia pastoris GS115 Subunit of both the Mdm10-Mdm12-Mmm1 complex and the mitochondrial sorting and assembly machinery XP_002489898.1 1034404 R 644223 CDS PAS_chr1-1_0248 254565577 8196750 1036448..1037377 1 NC_012963.1 Regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme 1037377 8196750 PAS_chr1-1_0248 Pichia pastoris GS115 Regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme XP_002489899.1 1036448 D 644223 CDS PAS_chr1-1_0249 254565579 8196751 1037536..1038318 1 NC_012963.1 Essential RNA-binding component of cleavage and polyadenylation factor, contains five zinc fingers 1038318 8196751 PAS_chr1-1_0249 Pichia pastoris GS115 Essential RNA-binding component of cleavage and polyadenylation factor, contains five zinc fingers XP_002489900.1 1037536 D 644223 CDS PAS_chr1-1_0250 254565581 8196752 complement(1038379..1040829) 1 NC_012963.1 Essential component of the conserved oligomeric Golgi complex (Cog1p through Cog8p) 1040829 8196752 PAS_chr1-1_0250 Pichia pastoris GS115 Essential component of the conserved oligomeric Golgi complex (Cog1p through Cog8p) XP_002489901.1 1038379 R 644223 CDS PAS_chr1-1_0251 254565583 8196753 complement(1041293..1041838) 1 NC_012963.1 hypothetical protein 1041838 8196753 PAS_chr1-1_0251 Pichia pastoris GS115 hypothetical protein XP_002489902.1 1041293 R 644223 CDS PAS_chr1-1_0252 254565585 8196754 1042412..1042948 1 NC_012963.1 hypothetical protein 1042948 8196754 PAS_chr1-1_0252 Pichia pastoris GS115 hypothetical protein XP_002489903.1 1042412 D 644223 CDS PAS_chr1-1_0253 254565587 8196755 complement(1043058..1044161) 1 NC_012963.1 Member of the DRG family of GTP-binding proteins 1044161 8196755 PAS_chr1-1_0253 Pichia pastoris GS115 Member of the DRG family of GTP-binding proteins XP_002489904.1 1043058 R 644223 CDS PAS_chr1-1_0254 254565589 8196756 1044418..1047540 1 NC_012963.1 GTPase 1047540 8196756 PAS_chr1-1_0254 Pichia pastoris GS115 GTPase XP_002489905.1 1044418 D 644223 CDS PAS_chr1-1_0255 254565591 8196757 complement(1047580..1052490) 1 NC_012963.1 Subunit of the THO complex 1052490 8196757 PAS_chr1-1_0255 Pichia pastoris GS115 Subunit of the THO complex XP_002489906.1 1047580 R 644223 CDS PAS_chr1-1_0256 254565593 8196758 join(1052696..1052698,1052759..1053025) 1 NC_012963.1 hypothetical protein 1053025 8196758 PAS_chr1-1_0256 Pichia pastoris GS115 hypothetical protein XP_002489907.1 1052696 D 644223 CDS PAS_chr1-1_0257 254565595 8196759 complement(1053079..1053903) 1 NC_012963.1 hypothetical protein 1053903 8196759 PAS_chr1-1_0257 Pichia pastoris GS115 hypothetical protein XP_002489908.1 1053079 R 644223 CDS PAS_chr1-1_0258 254565597 8196760 1054564..1055997 1 NC_012963.1 Essential protein that associates with the contractile actomyosin ring 1055997 8196760 PAS_chr1-1_0258 Pichia pastoris GS115 Essential protein that associates with the contractile actomyosin ring XP_002489909.1 1054564 D 644223 CDS PAS_chr1-1_0259 254565599 8196761 complement(1056031..1056639) 1 NC_012963.1 hypothetical protein 1056639 8196761 PAS_chr1-1_0259 Pichia pastoris GS115 hypothetical protein XP_002489910.1 1056031 R 644223 CDS PAS_chr1-1_0260 254565601 8196762 complement(1056808..1057239) 1 NC_012963.1 hypothetical protein 1057239 8196762 PAS_chr1-1_0260 Pichia pastoris GS115 hypothetical protein XP_002489911.1 1056808 R 644223 CDS PAS_chr1-1_0261 254565603 8196763 complement(1057386..1058108) 1 NC_012963.1 Alpha-tubulin folding protein, similar to mammalian cofactor B 1058108 8196763 PAS_chr1-1_0261 Pichia pastoris GS115 Alpha-tubulin folding protein, similar to mammalian cofactor B XP_002489912.1 1057386 R 644223 CDS PAS_chr1-1_0487 254565605 8196764 join(1058281..1058289,1058498..1058753,1058803..1059008) 1 NC_012963.1 hypothetical protein 1059008 8196764 PAS_chr1-1_0487 Pichia pastoris GS115 hypothetical protein XP_002489913.1 1058281 D 644223 CDS PAS_chr1-1_0262 254565607 8197927 1059188..1059838 1 NC_012963.1 Uracil phosphoribosyltransferase, synthesizes UMP from uracil 1059838 8197927 PAS_chr1-1_0262 Pichia pastoris GS115 Uracil phosphoribosyltransferase, synthesizes UMP from uracil XP_002489914.1 1059188 D 644223 CDS PAS_chr1-1_0263 254565609 8196765 complement(1059842..1061035) 1 NC_012963.1 Actin-related protein of the dynactin complex 1061035 8196765 PAS_chr1-1_0263 Pichia pastoris GS115 Actin-related protein of the dynactin complex XP_002489915.1 1059842 R 644223 CDS PAS_chr1-1_0264 254565611 8196766 complement(1061582..1063144) 1 NC_012963.1 hypothetical protein 1063144 8196766 PAS_chr1-1_0264 Pichia pastoris GS115 hypothetical protein XP_002489916.1 1061582 R 644223 CDS PAS_chr1-1_0265 254565613 8196767 complement(1063359..1064501) 1 NC_012963.1 hypothetical protein 1064501 8196767 PAS_chr1-1_0265 Pichia pastoris GS115 hypothetical protein XP_002489917.1 1063359 R 644223 CDS PAS_chr1-1_0266 254565615 8196768 complement(1064854..1067817) 1 NC_012963.1 hypothetical protein 1067817 8196768 PAS_chr1-1_0266 Pichia pastoris GS115 hypothetical protein XP_002489918.1 1064854 R 644223 CDS PAS_chr1-1_0267 254565617 8196769 complement(1068192..1068860) 1 NC_012963.1 Peptidyl-prolyl cis-trans isomerase (cyclophilin) of the endoplasmic reticulum 1068860 8196769 PAS_chr1-1_0267 Pichia pastoris GS115 Peptidyl-prolyl cis-trans isomerase (cyclophilin) of the endoplasmic reticulum XP_002489919.1 1068192 R 644223 CDS PAS_chr1-1_0268 254565619 8196770 join(1068987..1069016,1069068..1070153) 1 NC_012963.1 hypothetical protein 1070153 8196770 PAS_chr1-1_0268 Pichia pastoris GS115 hypothetical protein XP_002489920.1 1068987 D 644223 CDS PAS_chr1-1_0269 254565621 8196771 1070243..1076071 1 NC_012963.1 Putative RNA helicase related to Ski2p, involved in translation inhibition of non-poly(A) mRNAs 1076071 8196771 PAS_chr1-1_0269 Pichia pastoris GS115 Putative RNA helicase related to Ski2p, involved in translation inhibition of non-poly(A) mRNAs XP_002489921.1 1070243 D 644223 CDS PAS_chr1-1_0270 254565623 8196772 complement(1076151..1076864) 1 NC_012963.1 hypothetical protein 1076864 8196772 PAS_chr1-1_0270 Pichia pastoris GS115 hypothetical protein XP_002489922.1 1076151 R 644223 CDS PAS_chr1-1_0271 254565625 8196773 complement(join(1077072..1077439,1077572..1077596)) 1 NC_012963.1 Evolutionarily conserved non-essential protein present in early Golgi cisternae 1077596 8196773 PAS_chr1-1_0271 Pichia pastoris GS115 Evolutionarily conserved non-essential protein present in early Golgi cisternae XP_002489923.1 1077072 R 644223 CDS PAS_chr1-1_0273 254565627 8196774 1079757..1081058 1 NC_012963.1 Protein tyrosine phosphatase involved in cell cycle control 1081058 8196774 PAS_chr1-1_0273 Pichia pastoris GS115 Protein tyrosine phosphatase involved in cell cycle control XP_002489924.1 1079757 D 644223 CDS PAS_chr1-1_0274 254565629 8196775 complement(1081104..1081616) 1 NC_012963.1 Catalytic subunit of the mitochondrial inner membrane peptidase complex 1081616 8196775 PAS_chr1-1_0274 Pichia pastoris GS115 Catalytic subunit of the mitochondrial inner membrane peptidase complex XP_002489925.1 1081104 R 644223 CDS PAS_chr1-1_0275 254565631 8196776 1081740..1082438 1 NC_012963.1 Copper chaperone for superoxide dismutase Sod1p, involved in oxidative stress protection 1082438 8196776 PAS_chr1-1_0275 Pichia pastoris GS115 Copper chaperone for superoxide dismutase Sod1p, involved in oxidative stress protection XP_002489926.1 1081740 D 644223 CDS PAS_chr1-1_0488 254565633 8196777 complement(1082502..1082825) 1 NC_012963.1 hypothetical protein 1082825 8196777 PAS_chr1-1_0488 Pichia pastoris GS115 hypothetical protein XP_002489927.1 1082502 R 644223 CDS PAS_chr1-1_0276 254565635 8197928 complement(1083170..1083724) 1 NC_012963.1 Endoplasmic reticulum transmembrane protein 1083724 8197928 PAS_chr1-1_0276 Pichia pastoris GS115 Endoplasmic reticulum transmembrane protein XP_002489928.1 1083170 R 644223 CDS PAS_chr1-1_0489 254565637 8196778 complement(1083851..1084489) 1 NC_012963.1 hypothetical protein 1084489 8196778 PAS_chr1-1_0489 Pichia pastoris GS115 hypothetical protein XP_002489929.1 1083851 R 644223 CDS PAS_chr1-1_0277 254565639 8197929 1084924..1085793 1 NC_012963.1 Protein with a possible role in tRNA export 1085793 8197929 PAS_chr1-1_0277 Pichia pastoris GS115 Protein with a possible role in tRNA export XP_002489930.1 1084924 D 644223 CDS PAS_chr1-1_0278 254565641 8196779 1086194..1087765 1 NC_012963.1 hypothetical protein 1087765 8196779 PAS_chr1-1_0278 Pichia pastoris GS115 hypothetical protein XP_002489931.1 1086194 D 644223 CDS PAS_chr1-1_0279 254565643 8196780 1087998..1089533 1 NC_012963.1 Mitochondrial protein phosphatase of type 2C with similarity to mammalian PP1Ks 1089533 8196780 PAS_chr1-1_0279 Pichia pastoris GS115 Mitochondrial protein phosphatase of type 2C with similarity to mammalian PP1Ks XP_002489932.1 1087998 D 644223 CDS PAS_chr1-1_0490 254565645 8196781 1089752..1090798 1 NC_012963.1 hypothetical protein 1090798 8196781 PAS_chr1-1_0490 Pichia pastoris GS115 hypothetical protein XP_002489933.1 1089752 D 644223 CDS PAS_chr1-1_0491 254565647 8197930 1090876..1091232 1 NC_012963.1 hypothetical protein 1091232 8197930 PAS_chr1-1_0491 Pichia pastoris GS115 hypothetical protein XP_002489934.1 1090876 D 644223 CDS PAS_chr1-1_0280 254565649 8197931 1091193..1093046 1 NC_012963.1 Xylulokinase, converts D-xylulose and ATP to xylulose 5-phosphate and ADP 1093046 8197931 PAS_chr1-1_0280 Pichia pastoris GS115 Xylulokinase, converts D-xylulose and ATP to xylulose 5-phosphate and ADP XP_002489935.1 1091193 D 644223 CDS PAS_chr1-1_0281 254565651 8196782 complement(1093416..1094687) 1 NC_012963.1 Arsenite transporter of the plasma membrane, required for resistance to arsenic compounds 1094687 8196782 PAS_chr1-1_0281 Pichia pastoris GS115 Arsenite transporter of the plasma membrane, required for resistance to arsenic compounds XP_002489936.1 1093416 R 644223 CDS PAS_chr1-1_0282 254565653 8196783 complement(1095115..1097718) 1 NC_012963.1 One of two large regulatory subunits of ribonucleotide-diphosphate reductase 1097718 8196783 PAS_chr1-1_0282 Pichia pastoris GS115 One of two large regulatory subunits of ribonucleotide-diphosphate reductase XP_002489937.1 1095115 R 644223 CDS PAS_chr1-1_0283 254565655 8196784 complement(1098474..1098722) 1 NC_012963.1 Protein component of the small (40S) ribosomal subunit 1098722 8196784 PAS_chr1-1_0283 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002489938.1 1098474 R 644223 CDS PAS_chr1-1_0284 254565657 8196785 1099220..1100704 1 NC_012963.1 Putative plasma membrane permease proposed to be involved in carboxylic acid uptake 1100704 8196785 PAS_chr1-1_0284 Pichia pastoris GS115 Putative plasma membrane permease proposed to be involved in carboxylic acid uptake XP_002489939.1 1099220 D 644223 CDS PAS_chr1-1_0492 254565659 8196786 1100815..1101798 1 NC_012963.1 hypothetical protein 1101798 8196786 PAS_chr1-1_0492 Pichia pastoris GS115 hypothetical protein XP_002489940.1 1100815 D 644223 CDS PAS_chr1-1_0285 254565661 8197932 1102276..1103508 1 NC_012963.1 hypothetical protein 1103508 8197932 PAS_chr1-1_0285 Pichia pastoris GS115 hypothetical protein XP_002489941.1 1102276 D 644223 CDS PAS_chr1-1_0286 254565663 8196787 1103714..1105939 1 NC_012963.1 Protein O-mannosyltransferase, transfers mannose residues from dolichyl phosphate-D-mannose 1105939 8196787 PAS_chr1-1_0286 Pichia pastoris GS115 Protein O-mannosyltransferase, transfers mannose residues from dolichyl phosphate-D-mannose XP_002489942.1 1103714 D 644223 CDS PAS_chr1-1_0287 254565665 8196788 1106519..1108030 1 NC_012963.1 Allantoin permease 1108030 8196788 PAS_chr1-1_0287 Pichia pastoris GS115 Allantoin permease XP_002489943.1 1106519 D 644223 CDS PAS_chr1-1_0288 254565667 8196789 complement(1108093..1108509) 1 NC_012963.1 Subunit of the RNA polymerase II mediator complex 1108509 8196789 PAS_chr1-1_0288 Pichia pastoris GS115 Subunit of the RNA polymerase II mediator complex XP_002489944.1 1108093 R 644223 CDS PAS_chr1-1_0493 254565669 8196790 complement(1108692..1109429) 1 NC_012963.1 hypothetical protein 1109429 8196790 PAS_chr1-1_0493 Pichia pastoris GS115 hypothetical protein XP_002489945.1 1108692 R 644223 CDS PAS_chr1-1_0289 254565671 8197933 complement(1109562..1110134) 1 NC_012963.1 hypothetical protein 1110134 8197933 PAS_chr1-1_0289 Pichia pastoris GS115 hypothetical protein XP_002489946.1 1109562 R 644223 CDS PAS_chr1-1_0290 254565673 8196791 complement(1110628..1111299) 1 NC_012963.1 RING-type ubiquitin ligase of the endosomal and vacuolar membranes 1111299 8196791 PAS_chr1-1_0290 Pichia pastoris GS115 RING-type ubiquitin ligase of the endosomal and vacuolar membranes XP_002489947.1 1110628 R 644223 CDS PAS_chr1-1_0291 254565675 8196792 complement(1111535..1112761) 1 NC_012963.1 Protein required for ribosomal large subunit maturation, functionally redundant with Ssf1p 1112761 8196792 PAS_chr1-1_0291 Pichia pastoris GS115 Protein required for ribosomal large subunit maturation, functionally redundant with Ssf1p XP_002489948.1 1111535 R 644223 CDS PAS_chr1-1_0292 254565677 8196793 1113117..1114553 1 NC_012963.1 Protein involved in rRNA processing 1114553 8196793 PAS_chr1-1_0292 Pichia pastoris GS115 Protein involved in rRNA processing XP_002489949.1 1113117 D 644223 CDS PAS_chr1-1_0293 254565679 8196794 1114881..1116227 1 NC_012963.1 Cell wall protein that functions in the transfer of chitin to beta(1-6)glucan 1116227 8196794 PAS_chr1-1_0293 Pichia pastoris GS115 Cell wall protein that functions in the transfer of chitin to beta(1-6)glucan XP_002489950.1 1114881 D 644223 CDS PAS_chr1-1_0294 254565681 8196795 1116529..1120149 1 NC_012963.1 Alpha subunit of COPI vesicle coatomer complex 1120149 8196795 PAS_chr1-1_0294 Pichia pastoris GS115 Alpha subunit of COPI vesicle coatomer complex XP_002489951.1 1116529 D 644223 CDS PAS_chr1-1_0295 254565683 8196796 complement(1120225..1121799) 1 NC_012963.1 JmjC domain family histone demethylase specific for H3-K36 1121799 8196796 PAS_chr1-1_0295 Pichia pastoris GS115 JmjC domain family histone demethylase specific for H3-K36 XP_002489952.1 1120225 R 644223 CDS PAS_chr1-1_0296 254565685 8196797 1122127..1122582 1 NC_012963.1 Mitochondrial ribosomal protein of the small subunit 1122582 8196797 PAS_chr1-1_0296 Pichia pastoris GS115 Mitochondrial ribosomal protein of the small subunit XP_002489953.1 1122127 D 644223 CDS PAS_chr1-1_0297 254565687 8196798 complement(1122649..1123953) 1 NC_012963.1 Mitochondrial protein kinase 1123953 8196798 PAS_chr1-1_0297 Pichia pastoris GS115 Mitochondrial protein kinase XP_002489954.1 1122649 R 644223 CDS PAS_chr1-1_0298 254565689 8196799 complement(1124333..1125649) 1 NC_012963.1 hypothetical protein 1125649 8196799 PAS_chr1-1_0298 Pichia pastoris GS115 hypothetical protein XP_002489955.1 1124333 R 644223 CDS PAS_chr1-1_0495 254565691 8196800 1126127..1126903 1 NC_012963.1 hypothetical protein 1126903 8196800 PAS_chr1-1_0495 Pichia pastoris GS115 hypothetical protein XP_002489956.1 1126127 D 644223 CDS PAS_chr1-1_0299 254565693 8197934 complement(1126900..1128225) 1 NC_012963.1 Essential, non-ATPase regulatory subunit of the 26S proteasome lid 1128225 8197934 PAS_chr1-1_0299 Pichia pastoris GS115 Essential, non-ATPase regulatory subunit of the 26S proteasome lid XP_002489957.1 1126900 R 644223 CDS PAS_chr1-1_0300 254565695 8196801 1128726..1130816 1 NC_012963.1 Plasma membrane glucose sensor that regulates glucose transport 1130816 8196801 PAS_chr1-1_0300 Pichia pastoris GS115 Plasma membrane glucose sensor that regulates glucose transport XP_002489958.1 1128726 D 644223 CDS PAS_chr1-1_0301 254565697 8196802 1131117..1132145 1 NC_012963.1 Prenyltransferase, required for cell viability 1132145 8196802 PAS_chr1-1_0301 Pichia pastoris GS115 Prenyltransferase, required for cell viability XP_002489959.1 1131117 D 644223 CDS PAS_chr1-1_0302 254565699 8196803 join(1132471..1132473,1132770..1133129) 1 NC_012963.1 Protein component of the large (60S) ribosomal subunit, identical to Rpl35Ap 1133129 8196803 PAS_chr1-1_0302 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit, identical to Rpl35Ap XP_002489960.1 1132471 D 644223 CDS PAS_chr1-1_0303 254565701 8196804 complement(1133222..1136086) 1 NC_012963.1 Ubiquitin chain assembly factor (E4) that cooperates with a ubiquitin-activating enzyme (E1) 1136086 8196804 PAS_chr1-1_0303 Pichia pastoris GS115 Ubiquitin chain assembly factor (E4) that cooperates with a ubiquitin-activating enzyme (E1) XP_002489961.1 1133222 R 644223 CDS PAS_chr1-1_0304 254565703 8196805 join(1136703..1136765,1136844..1137794) 1 NC_012963.1 hypothetical protein 1137794 8196805 PAS_chr1-1_0304 Pichia pastoris GS115 hypothetical protein XP_002489962.1 1136703 D 644223 CDS PAS_chr1-1_0305 254565705 8196806 complement(1137949..1138548) 1 NC_012963.1 Rho GDP dissociation inhibitor involved in the localization and regulation of Cdc42p 1138548 8196806 PAS_chr1-1_0305 Pichia pastoris GS115 Rho GDP dissociation inhibitor involved in the localization and regulation of Cdc42p XP_002489963.1 1137949 R 644223 CDS PAS_chr1-1_0306 254565707 8197114 1139345..1139935 1 NC_012963.1 hypothetical protein 1139935 8197114 PAS_chr1-1_0306 Pichia pastoris GS115 hypothetical protein XP_002489964.1 1139345 D 644223 CDS PAS_chr1-1_0307 254565709 8196574 complement(1139959..1141017) 1 NC_012963.1 Catalytic subunit of protein phosphatase 2A, functionally redundant with Pph22p 1141017 8196574 PAS_chr1-1_0307 Pichia pastoris GS115 Catalytic subunit of protein phosphatase 2A, functionally redundant with Pph22p XP_002489965.1 1139959 R 644223 CDS PAS_chr1-1_0308 254565711 8196575 1141942..1142634 1 NC_012963.1 hypothetical protein 1142634 8196575 PAS_chr1-1_0308 Pichia pastoris GS115 hypothetical protein XP_002489966.1 1141942 D 644223 CDS PAS_chr1-1_0309 254565713 8196576 complement(1142705..1144438) 1 NC_012963.1 Vacuolar ATPase V1 domain subunit A containing the catalytic nucleotide binding sites 1144438 8196576 PAS_chr1-1_0309 Pichia pastoris GS115 Vacuolar ATPase V1 domain subunit A containing the catalytic nucleotide binding sites XP_002489967.1 1142705 R 644223 CDS PAS_chr1-1_0310 254565715 8196577 complement(1145599..1146510) 1 NC_012963.1 hypothetical protein 1146510 8196577 PAS_chr1-1_0310 Pichia pastoris GS115 hypothetical protein XP_002489968.1 1145599 R 644223 CDS PAS_chr1-1_0311 254565717 8196578 1146755..1147801 1 NC_012963.1 hypothetical protein 1147801 8196578 PAS_chr1-1_0311 Pichia pastoris GS115 hypothetical protein XP_002489969.1 1146755 D 644223 CDS PAS_chr1-1_0312 254565719 8196579 1148046..1150388 1 NC_012963.1 Cullin, structural protein of SCF complexes, involved in ubiquination 1150388 8196579 PAS_chr1-1_0312 Pichia pastoris GS115 Cullin, structural protein of SCF complexes, involved in ubiquination XP_002489970.1 1148046 D 644223 CDS PAS_chr1-1_0313 254565721 8196580 join(1150530..1150545,1150619..1151910) 1 NC_012963.1 Homocitrate synthase isozyme, catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate 1151910 8196580 PAS_chr1-1_0313 Pichia pastoris GS115 Homocitrate synthase isozyme, catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate XP_002489971.1 1150530 D 644223 CDS PAS_chr1-1_0314 254565723 8196581 complement(1151978..1156054) 1 NC_012963.1 Component of the GARP (Golgi-associated retrograde protein) complex 1156054 8196581 PAS_chr1-1_0314 Pichia pastoris GS115 Component of the GARP (Golgi-associated retrograde protein) complex XP_002489972.1 1151978 R 644223 CDS PAS_chr1-1_0315 254565725 8196582 complement(1156488..1156742) 1 NC_012963.1 Protein that inhibits ATP hydrolysis by the F1F0-ATP synthase 1156742 8196582 PAS_chr1-1_0315 Pichia pastoris GS115 Protein that inhibits ATP hydrolysis by the F1F0-ATP synthase XP_002489973.1 1156488 R 644223 CDS PAS_chr1-1_0317 254565727 8196583 1158402..1159364 1 NC_012963.1 hypothetical protein 1159364 8196583 PAS_chr1-1_0317 Pichia pastoris GS115 hypothetical protein XP_002489974.1 1158402 D 644223 CDS PAS_chr1-1_0318 254565729 8196584 complement(1159386..1162895) 1 NC_012963.1 hypothetical protein 1162895 8196584 PAS_chr1-1_0318 Pichia pastoris GS115 hypothetical protein XP_002489975.1 1159386 R 644223 CDS PAS_chr1-1_0319 254565731 8196585 join(1163600..1163770,1163815..1164705) 1 NC_012963.1 Fructose 1,6-bisphosphate aldolase, required for glycolysis and gluconeogenesis 1164705 8196585 PAS_chr1-1_0319 Pichia pastoris GS115 Fructose 1,6-bisphosphate aldolase, required for glycolysis and gluconeogenesis XP_002489976.1 1163600 D 644223 CDS PAS_chr1-1_0320 254565733 8196586 complement(1164732..1166711) 1 NC_012963.1 hypothetical protein 1166711 8196586 PAS_chr1-1_0320 Pichia pastoris GS115 hypothetical protein XP_002489977.1 1164732 R 644223 CDS PAS_chr1-1_0322 254565735 8196587 1168399..1168782 1 NC_012963.1 Subunit 7 of the ubiquinol cytochrome-c reductase complex 1168782 8196587 PAS_chr1-1_0322 Pichia pastoris GS115 Subunit 7 of the ubiquinol cytochrome-c reductase complex XP_002489978.1 1168399 D 644223 CDS PAS_chr1-1_0323 254565737 8196588 complement(1168830..1169837) 1 NC_012963.1 Diadenosine 5',5''-P1,P4-tetraphosphate phosphorylase II (AP4A phosphorylase) 1169837 8196588 PAS_chr1-1_0323 Pichia pastoris GS115 Diadenosine 5',5''-P1,P4-tetraphosphate phosphorylase II (AP4A phosphorylase) XP_002489979.1 1168830 R 644223 CDS PAS_chr1-1_0324 254565739 8196589 1170247..1171416 1 NC_012963.1 pantothenate kinase 1171416 8196589 PAS_chr1-1_0324 Pichia pastoris GS115 pantothenate kinase XP_002489980.1 1170247 D 644223 CDS PAS_chr1-1_0325 254565741 8196590 complement(1171421..1172113) 1 NC_012963.1 hypothetical protein 1172113 8196590 PAS_chr1-1_0325 Pichia pastoris GS115 hypothetical protein XP_002489981.1 1171421 R 644223 CDS PAS_chr1-1_0326 254565743 8196591 1172477..1173568 1 NC_012963.1 hypothetical protein 1173568 8196591 PAS_chr1-1_0326 Pichia pastoris GS115 hypothetical protein XP_002489982.1 1172477 D 644223 CDS PAS_chr1-1_0327 254565745 8196592 complement(1173601..1175784) 1 NC_012963.1 Zinc metalloendopeptidase, found in the cytoplasm and intermembrane space of mitochondria 1175784 8196592 PAS_chr1-1_0327 Pichia pastoris GS115 Zinc metalloendopeptidase, found in the cytoplasm and intermembrane space of mitochondria XP_002489983.1 1173601 R 644223 CDS PAS_chr1-1_0496 254565747 8196593 complement(1176067..1176954) 1 NC_012963.1 hypothetical protein 1176954 8196593 PAS_chr1-1_0496 Pichia pastoris GS115 hypothetical protein XP_002489984.1 1176067 R 644223 CDS PAS_chr1-1_0328 254565749 8197935 1178112..1179722 1 NC_012963.1 hypothetical protein 1179722 8197935 PAS_chr1-1_0328 Pichia pastoris GS115 hypothetical protein XP_002489985.1 1178112 D 644223 CDS PAS_chr1-1_0329 254565751 8196594 complement(1179743..1182919) 1 NC_012963.1 hypothetical protein 1182919 8196594 PAS_chr1-1_0329 Pichia pastoris GS115 hypothetical protein XP_002489986.1 1179743 R 644223 CDS PAS_chr1-1_0330 254565753 8196595 1183139..1183390 1 NC_012963.1 hypothetical protein 1183390 8196595 PAS_chr1-1_0330 Pichia pastoris GS115 hypothetical protein XP_002489987.1 1183139 D 644223 CDS PAS_chr1-1_0497 254565755 8196596 complement(1183729..1184058) 1 NC_012963.1 hypothetical protein 1184058 8196596 PAS_chr1-1_0497 Pichia pastoris GS115 hypothetical protein XP_002489988.1 1183729 R 644223 CDS PAS_chr1-1_0331 254565757 8197936 1184162..1185106 1 NC_012963.1 Essential nucleolar protein required for the synthesis of 18S rRNA 1185106 8197936 PAS_chr1-1_0331 Pichia pastoris GS115 Essential nucleolar protein required for the synthesis of 18S rRNA XP_002489989.1 1184162 D 644223 CDS PAS_chr1-1_0332 254565759 8196597 complement(1185127..1186896) 1 NC_012963.1 Pheromone-regulated multispanning membrane protein involved in membrane fusion during mating 1186896 8196597 PAS_chr1-1_0332 Pichia pastoris GS115 Pheromone-regulated multispanning membrane protein involved in membrane fusion during mating XP_002489990.1 1185127 R 644223 CDS PAS_chr1-1_0333 254565761 8196598 complement(1187440..1187631) 1 NC_012963.1 hypothetical protein 1187631 8196598 PAS_chr1-1_0333 Pichia pastoris GS115 hypothetical protein XP_002489991.1 1187440 R 644223 CDS PAS_chr1-1_0334 254565763 8196599 complement(1187840..1188643) 1 NC_012963.1 hypothetical protein 1188643 8196599 PAS_chr1-1_0334 Pichia pastoris GS115 hypothetical protein XP_002489992.1 1187840 R 644223 CDS PAS_chr1-1_0335 254565765 8196600 complement(1188903..1189652) 1 NC_012963.1 Member of the alpha/beta knot fold methyltransferase superfamily 1189652 8196600 PAS_chr1-1_0335 Pichia pastoris GS115 Member of the alpha/beta knot fold methyltransferase superfamily XP_002489993.1 1188903 R 644223 CDS PAS_chr1-1_0336 254565767 8196601 1189866..1191725 1 NC_012963.1 hypothetical protein 1191725 8196601 PAS_chr1-1_0336 Pichia pastoris GS115 hypothetical protein XP_002489994.1 1189866 D 644223 CDS PAS_chr1-1_0337 254565769 8196602 complement(join(1191789..1192036,1192196..1192202)) 1 NC_012963.1 Protein component of the large (60S) ribosomal subunit, has similarity to Rpl37Bp 1192202 8196602 PAS_chr1-1_0337 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit, has similarity to Rpl37Bp XP_002489995.1 1191789 R 644223 CDS PAS_chr1-1_0338 254565771 8196603 1192542..1193735 1 NC_012963.1 Protein required for partitioning of the 2-micron plasmid 1193735 8196603 PAS_chr1-1_0338 Pichia pastoris GS115 Protein required for partitioning of the 2-micron plasmid XP_002489996.1 1192542 D 644223 CDS PAS_chr1-1_0339 254565773 8196604 1193933..1195246 1 NC_012963.1 hypothetical protein 1195246 8196604 PAS_chr1-1_0339 Pichia pastoris GS115 hypothetical protein XP_002489997.1 1193933 D 644223 CDS PAS_chr1-1_0498 254565775 8196605 1195590..1196423 1 NC_012963.1 hypothetical protein 1196423 8196605 PAS_chr1-1_0498 Pichia pastoris GS115 hypothetical protein XP_002489998.1 1195590 D 644223 CDS PAS_chr1-1_0340 254565777 8197937 1196716..1200225 1 NC_012963.1 Protein kinase involved in bud growth and assembly of the septin ring 1200225 8197937 PAS_chr1-1_0340 Pichia pastoris GS115 Protein kinase involved in bud growth and assembly of the septin ring XP_002489999.1 1196716 D 644223 CDS PAS_chr1-1_0341 254565779 8196606 complement(1200349..1201962) 1 NC_012963.1 Lysine permease 1201962 8196606 PAS_chr1-1_0341 Pichia pastoris GS115 Lysine permease XP_002490000.1 1200349 R 644223 CDS PAS_chr1-1_0342 254565781 8196607 complement(1202359..1202556) 1 NC_012963.1 hypothetical protein 1202556 8196607 PAS_chr1-1_0342 Pichia pastoris GS115 hypothetical protein XP_002490001.1 1202359 R 644223 CDS PAS_chr1-1_0345 254565783 8196608 1204380..1205273 1 NC_012963.1 Protein component of the large (60S) ribosomal subunit 1205273 8196608 PAS_chr1-1_0345 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit XP_002490002.1 1204380 D 644223 CDS PAS_chr1-1_0346 254565785 8196609 1205573..1209055 1 NC_012963.1 Glc7-interacting protein whose overexpression relocalizes Glc7p from the nucleus 1209055 8196609 PAS_chr1-1_0346 Pichia pastoris GS115 Glc7-interacting protein whose overexpression relocalizes Glc7p from the nucleus XP_002490003.1 1205573 D 644223 CDS PAS_chr1-1_0347 254565787 8196610 complement(1209136..1209828) 1 NC_012963.1 hypothetical protein 1209828 8196610 PAS_chr1-1_0347 Pichia pastoris GS115 hypothetical protein XP_002490004.1 1209136 R 644223 CDS PAS_chr1-1_0348 254565789 8196611 1210530..1211597 1 NC_012963.1 Protein involved in mating response, invasive/filamentous growth, and osmotolerance 1211597 8196611 PAS_chr1-1_0348 Pichia pastoris GS115 Protein involved in mating response, invasive/filamentous growth, and osmotolerance XP_002490005.1 1210530 D 644223 CDS PAS_chr1-1_0349 254565791 8196612 complement(1211695..1212615) 1 NC_012963.1 Essential protein involved in rRNA processing and ribosome biogenesis 1212615 8196612 PAS_chr1-1_0349 Pichia pastoris GS115 Essential protein involved in rRNA processing and ribosome biogenesis XP_002490006.1 1211695 R 644223 CDS PAS_chr1-1_0350 254565793 8196613 complement(1212700..1213014) 1 NC_012963.1 Protein of the mitochondrial intermembrane space, required for acetate utilization and gluconeogenes 1213014 8196613 PAS_chr1-1_0350 Pichia pastoris GS115 Protein of the mitochondrial intermembrane space, required for acetate utilization and gluconeogenes XP_002490007.1 1212700 R 644223 CDS PAS_chr1-1_0351 254565795 8196614 1213609..1214991 1 NC_012963.1 hypothetical protein 1214991 8196614 PAS_chr1-1_0351 Pichia pastoris GS115 hypothetical protein XP_002490008.1 1213609 D 644223 CDS PAS_chr1-1_0352 254565797 8196615 complement(1215240..1215917) 1 NC_012963.1 hypothetical protein 1215917 8196615 PAS_chr1-1_0352 Pichia pastoris GS115 hypothetical protein XP_002490009.1 1215240 R 644223 CDS PAS_chr1-1_0353 254565799 8196616 join(1216369..1216521,1216599..1218029) 1 NC_012963.1 Vacuolar integral membrane protein 1218029 8196616 PAS_chr1-1_0353 Pichia pastoris GS115 Vacuolar integral membrane protein XP_002490010.1 1216369 D 644223 CDS PAS_chr1-1_0354 254565801 8196617 complement(1218124..1219698) 1 NC_012963.1 Allantoin permease 1219698 8196617 PAS_chr1-1_0354 Pichia pastoris GS115 Allantoin permease XP_002490011.1 1218124 R 644223 CDS PAS_chr1-1_0355 254565803 8196618 1220265..1221380 1 NC_012963.1 glycosyl hydrolase family 88, putative 1221380 8196618 PAS_chr1-1_0355 Pichia pastoris GS115 glycosyl hydrolase family 88, putative XP_002490012.1 1220265 D 644223 CDS PAS_chr1-1_0356 254565805 8196619 complement(1221581..1222522) 1 NC_012963.1 hypothetical protein 1222522 8196619 PAS_chr1-1_0356 Pichia pastoris GS115 hypothetical protein XP_002490013.1 1221581 R 644223 CDS PAS_chr1-1_0357 254565807 8196620 complement(1223003..1224076) 1 NC_012963.1 NADPH-dependent medium chain alcohol dehydrogenase with broad substrate specificity 1224076 8196620 PAS_chr1-1_0357 Pichia pastoris GS115 NADPH-dependent medium chain alcohol dehydrogenase with broad substrate specificity XP_002490014.1 1223003 R 644223 CDS PAS_chr1-1_0358 254565809 8196621 1224647..1225858 1 NC_012963.1 Ceramide synthase component, involved in synthesis of ceramide 1225858 8196621 PAS_chr1-1_0358 Pichia pastoris GS115 Ceramide synthase component, involved in synthesis of ceramide XP_002490015.1 1224647 D 644223 CDS PAS_chr1-1_0499 254565811 8196622 1226272..1226655 1 NC_012963.1 hypothetical protein 1226655 8196622 PAS_chr1-1_0499 Pichia pastoris GS115 hypothetical protein XP_002490016.1 1226272 D 644223 CDS PAS_chr1-1_0359 254565813 8197938 complement(1226674..1227798) 1 NC_012963.1 hypothetical protein 1227798 8197938 PAS_chr1-1_0359 Pichia pastoris GS115 hypothetical protein XP_002490017.1 1226674 R 644223 CDS PAS_chr1-1_0360 254565815 8196623 1228043..1228972 1 NC_012963.1 2-methylbutyraldehyde reductase, may be involved in isoleucine catabolism 1228972 8196623 PAS_chr1-1_0360 Pichia pastoris GS115 2-methylbutyraldehyde reductase, may be involved in isoleucine catabolism XP_002490018.1 1228043 D 644223 CDS PAS_chr1-1_0361 254565817 8196624 join(1229267..1229532,1229564..1231508) 1 NC_012963.1 hypothetical protein 1231508 8196624 PAS_chr1-1_0361 Pichia pastoris GS115 hypothetical protein XP_002490019.1 1229267 D 644223 CDS PAS_chr1-1_0363 254565819 8196625 complement(1231595..1236598) 1 NC_012963.1 Ubiquitin-protein ligase (E3) that interacts with Rpt4p and Rpt6p 1236598 8196625 PAS_chr1-1_0363 Pichia pastoris GS115 Ubiquitin-protein ligase (E3) that interacts with Rpt4p and Rpt6p XP_002490020.1 1231595 R 644223 CDS PAS_chr1-1_0364 254565821 8196626 1237027..1237737 1 NC_012963.1 Protein involved in mRNA turnover and ribosome assembly, localizes to the nucleolus 1237737 8196626 PAS_chr1-1_0364 Pichia pastoris GS115 Protein involved in mRNA turnover and ribosome assembly, localizes to the nucleolus XP_002490021.1 1237027 D 644223 CDS PAS_chr1-1_0500 254565823 8196627 join(1238044..1238839,1238928..1239571) 1 NC_012963.1 hypothetical protein 1239571 8196627 PAS_chr1-1_0500 Pichia pastoris GS115 hypothetical protein XP_002490022.1 1238044 D 644223 CDS PAS_chr1-1_0365 254565825 8197939 complement(join(1239617..1240826,1240902..1240978)) 1 NC_012963.1 Putative protein serine/threonine kinase expressed at the end of meiosis 1240978 8197939 PAS_chr1-1_0365 Pichia pastoris GS115 Putative protein serine/threonine kinase expressed at the end of meiosis XP_002490023.1 1239617 R 644223 CDS PAS_chr1-1_0366 254565827 8196628 1241750..1242574 1 NC_012963.1 Ribonuclease H1 1242574 8196628 PAS_chr1-1_0366 Pichia pastoris GS115 Ribonuclease H1 XP_002490024.1 1241750 D 644223 CDS PAS_chr1-1_0367 254565829 8196629 complement(join(1242653..1243705,1243804..1243806)) 1 NC_012963.1 Protein that interacts with Cdc48p and Npl4p, involved in recognition of polyubiquitinated proteins 1243806 8196629 PAS_chr1-1_0367 Pichia pastoris GS115 Protein that interacts with Cdc48p and Npl4p, involved in recognition of polyubiquitinated proteins XP_002490025.1 1242653 R 644223 CDS PAS_chr1-1_0368 254565831 8196630 1244048..1247071 1 NC_012963.1 One of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC) 1247071 8196630 PAS_chr1-1_0368 Pichia pastoris GS115 One of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC) XP_002490026.1 1244048 D 644223 CDS PAS_chr1-1_0369 254565833 8196631 1247268..1247918 1 NC_012963.1 Protein with a positive role in the multivesicular body sorting pathway 1247918 8196631 PAS_chr1-1_0369 Pichia pastoris GS115 Protein with a positive role in the multivesicular body sorting pathway XP_002490027.1 1247268 D 644223 CDS PAS_chr1-1_0370 254565835 8196632 complement(1248012..1249118) 1 NC_012963.1 hypothetical protein 1249118 8196632 PAS_chr1-1_0370 Pichia pastoris GS115 hypothetical protein XP_002490028.1 1248012 R 644223 CDS PAS_chr1-1_0371 254565837 8196633 1249940..1250680 1 NC_012963.1 Transcription factor (bHLH) involved in interorganelle communication 1250680 8196633 PAS_chr1-1_0371 Pichia pastoris GS115 Transcription factor (bHLH) involved in interorganelle communication XP_002490029.1 1249940 D 644223 CDS PAS_chr1-1_0372 254565839 8196634 1251004..1251645 1 NC_012963.1 Non-essential tetra-spanning membrane protein found mostly in the late Golgi 1251645 8196634 PAS_chr1-1_0372 Pichia pastoris GS115 Non-essential tetra-spanning membrane protein found mostly in the late Golgi XP_002490030.1 1251004 D 644223 CDS PAS_chr1-1_0373 254565841 8196635 complement(1251678..1253903) 1 NC_012963.1 Subunit of the N-terminal acetyltransferase NatA (Nat1p, Ard1p, Nat5p) 1253903 8196635 PAS_chr1-1_0373 Pichia pastoris GS115 Subunit of the N-terminal acetyltransferase NatA (Nat1p, Ard1p, Nat5p) XP_002490031.1 1251678 R 644223 CDS PAS_chr1-1_0374 254565843 8196636 complement(1254139..1255701) 1 NC_012963.1 Conserved NAD+ dependent histone deacetylase of the Sirtuin family 1255701 8196636 PAS_chr1-1_0374 Pichia pastoris GS115 Conserved NAD+ dependent histone deacetylase of the Sirtuin family XP_002490032.1 1254139 R 644223 CDS PAS_chr1-1_0375 254565845 8196637 1255921..1256196 1 NC_012963.1 Mitochondrial ribosomal protein of the small subunit 1256196 8196637 PAS_chr1-1_0375 Pichia pastoris GS115 Mitochondrial ribosomal protein of the small subunit XP_002490033.1 1255921 D 644223 CDS PAS_chr1-1_0501 254565847 8196638 1256373..1257551 1 NC_012963.1 hypothetical protein 1257551 8196638 PAS_chr1-1_0501 Pichia pastoris GS115 hypothetical protein XP_002490034.1 1256373 D 644223 CDS PAS_chr1-1_0376 254565849 8197940 1257760..1259835 1 NC_012963.1 DNA replication initiation factor 1259835 8197940 PAS_chr1-1_0376 Pichia pastoris GS115 DNA replication initiation factor XP_002490035.1 1257760 D 644223 CDS PAS_chr1-1_0377 254565851 8196639 complement(1261247..1262818) 1 NC_012963.1 RNA exonuclease 1262818 8196639 PAS_chr1-1_0377 Pichia pastoris GS115 RNA exonuclease XP_002490036.1 1261247 R 644223 CDS PAS_chr1-1_0378 254565853 8196640 1263558..1264334 1 NC_012963.1 Putative transmembrane protein involved in export of ammonia 1264334 8196640 PAS_chr1-1_0378 Pichia pastoris GS115 Putative transmembrane protein involved in export of ammonia XP_002490037.1 1263558 D 644223 CDS PAS_chr1-1_0379 254565855 8196641 complement(join(1264858..1266327,1266441..1266752)) 1 NC_012963.1 GPI-anchored aspartyl protease (yapsin) involved in protein processing 1266752 8196641 PAS_chr1-1_0379 Pichia pastoris GS115 GPI-anchored aspartyl protease (yapsin) involved in protein processing XP_002490038.1 1264858 R 644223 CDS PAS_chr1-1_0381 254565857 8196642 1268884..1269879 1 NC_012963.1 bZIP transcription factor (ATF/CREB1 homolog) that regulates the unfolded protein response 1269879 8196642 PAS_chr1-1_0381 Pichia pastoris GS115 bZIP transcription factor (ATF/CREB1 homolog) that regulates the unfolded protein response XP_002490039.1 1268884 D 644223 CDS PAS_chr1-1_0382 254565859 8196643 1271378..1271953 1 NC_012963.1 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl9Ap 1271953 8196643 PAS_chr1-1_0382 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl9Ap XP_002490040.1 1271378 D 644223 CDS PAS_chr1-1_0383 254565861 8196644 1272240..1272833 1 NC_012963.1 Component of U4/U6.U5 snRNP involved in mRNA splicing via spliceosome 1272833 8196644 PAS_chr1-1_0383 Pichia pastoris GS115 Component of U4/U6.U5 snRNP involved in mRNA splicing via spliceosome XP_002490041.1 1272240 D 644223 CDS PAS_chr1-1_0384 254565863 8196645 complement(1272870..1273676) 1 NC_012963.1 hypothetical protein 1273676 8196645 PAS_chr1-1_0384 Pichia pastoris GS115 hypothetical protein XP_002490042.1 1272870 R 644223 CDS PAS_chr1-1_0385 254565865 8196646 1274048..1274521 1 NC_012963.1 Mitochondrial ribosomal protein of the small subunit 1274521 8196646 PAS_chr1-1_0385 Pichia pastoris GS115 Mitochondrial ribosomal protein of the small subunit XP_002490043.1 1274048 D 644223 CDS PAS_chr1-1_0386 254565867 8196647 1274699..1275433 1 NC_012963.1 DNA 3'-phosphatase that functions in repair of endogenous damage of double-stranded DNA 1275433 8196647 PAS_chr1-1_0386 Pichia pastoris GS115 DNA 3'-phosphatase that functions in repair of endogenous damage of double-stranded DNA XP_002490044.1 1274699 D 644223 CDS PAS_chr1-1_0387 254565869 8196648 1275598..1277775 1 NC_012963.1 hypothetical protein 1277775 8196648 PAS_chr1-1_0387 Pichia pastoris GS115 hypothetical protein XP_002490045.1 1275598 D 644223 CDS PAS_chr1-1_0388 254565871 8197579 1278263..1278979 1 NC_012963.1 hypothetical protein 1278979 8197579 PAS_chr1-1_0388 Pichia pastoris GS115 hypothetical protein XP_002490046.1 1278263 D 644223 CDS PAS_chr1-1_0389 254565873 8197346 complement(1279048..1280445) 1 NC_012963.1 Argininosuccinate lyase, catalyzes the final step in the arginine biosynthesis pathway 1280445 8197346 PAS_chr1-1_0389 Pichia pastoris GS115 Argininosuccinate lyase, catalyzes the final step in the arginine biosynthesis pathway XP_002490047.1 1279048 R 644223 CDS PAS_chr1-1_0390 254565875 8196520 complement(1280610..1282265) 1 NC_012963.1 Cytosolic asparaginyl-tRNA synthetase, required for protein synthesis 1282265 8196520 PAS_chr1-1_0390 Pichia pastoris GS115 Cytosolic asparaginyl-tRNA synthetase, required for protein synthesis XP_002490048.1 1280610 R 644223 CDS PAS_chr1-1_0391 254565877 8196521 1282721..1284754 1 NC_012963.1 hypothetical protein 1284754 8196521 PAS_chr1-1_0391 Pichia pastoris GS115 hypothetical protein XP_002490049.1 1282721 D 644223 CDS PAS_chr1-1_0392 254565879 8196522 1285101..1286537 1 NC_012963.1 Mitochondrial asparaginyl-tRNA synthetase 1286537 8196522 PAS_chr1-1_0392 Pichia pastoris GS115 Mitochondrial asparaginyl-tRNA synthetase XP_002490050.1 1285101 D 644223 CDS PAS_chr1-1_0393 254565881 8196523 complement(1286615..1289476) 1 NC_012963.1 Chitin synthase I 1289476 8196523 PAS_chr1-1_0393 Pichia pastoris GS115 Chitin synthase I XP_002490051.1 1286615 R 644223 CDS PAS_chr1-1_0394 254565883 8196524 1290085..1291695 1 NC_012963.1 hypothetical protein with low sequence identity to Pdc1p 1291695 8196524 PAS_chr1-1_0394 Pichia pastoris GS115 hypothetical protein with low sequence identity to Pdc1p XP_002490052.1 1290085 D 644223 CDS PAS_chr1-1_0395 254565885 8196525 complement(1291703..1293676) 1 NC_012963.1 Nucleotide pyrophosphatase/phosphodiesterase family member 1293676 8196525 PAS_chr1-1_0395 Pichia pastoris GS115 Nucleotide pyrophosphatase/phosphodiesterase family member XP_002490053.1 1291703 R 644223 CDS PAS_chr1-1_0396 254565887 8196526 1294199..1296286 1 NC_012963.1 hypothetical protein 1296286 8196526 PAS_chr1-1_0396 Pichia pastoris GS115 hypothetical protein XP_002490054.1 1294199 D 644223 CDS PAS_chr1-1_0397 254565889 8196527 complement(1296297..1297223) 1 NC_012963.1 Histidinolphosphatase, catalyzes the eighth step in histidine biosynthesis 1297223 8196527 PAS_chr1-1_0397 Pichia pastoris GS115 Histidinolphosphatase, catalyzes the eighth step in histidine biosynthesis XP_002490055.1 1296297 R 644223 CDS PAS_chr1-1_0398 254565891 8196528 1298124..1302677 1 NC_012963.1 Plasma membrane ATP binding cassette (ABC) transporter 1302677 8196528 PAS_chr1-1_0398 Pichia pastoris GS115 Plasma membrane ATP binding cassette (ABC) transporter XP_002490056.1 1298124 D 644223 CDS PAS_chr1-1_0399 254565893 8196529 1302943..1304406 1 NC_012963.1 hypothetical protein 1304406 8196529 PAS_chr1-1_0399 Pichia pastoris GS115 hypothetical protein XP_002490057.1 1302943 D 644223 CDS PAS_chr1-1_0400 254565895 8196530 complement(1304455..1306473) 1 NC_012963.1 hypothetical protein 1306473 8196530 PAS_chr1-1_0400 Pichia pastoris GS115 hypothetical protein XP_002490058.1 1304455 R 644223 CDS PAS_chr1-1_0401 254565897 8196531 1306677..1307567 1 NC_012963.1 Mitochondrial protein, putative inner membrane transporter 1307567 8196531 PAS_chr1-1_0401 Pichia pastoris GS115 Mitochondrial protein, putative inner membrane transporter XP_002490059.1 1306677 D 644223 CDS PAS_chr1-1_0402 254565899 8196532 1308246..1310495 1 NC_012963.1 hypothetical protein 1310495 8196532 PAS_chr1-1_0402 Pichia pastoris GS115 hypothetical protein XP_002490060.1 1308246 D 644223 CDS PAS_chr1-1_0403 254565901 8196533 1310751..1312808 1 NC_012963.1 hypothetical protein 1312808 8196533 PAS_chr1-1_0403 Pichia pastoris GS115 hypothetical protein XP_002490061.1 1310751 D 644223 CDS PAS_chr1-1_0404 254565903 8196534 complement(1313045..1313746) 1 NC_012963.1 hypothetical protein 1313746 8196534 PAS_chr1-1_0404 Pichia pastoris GS115 hypothetical protein XP_002490062.1 1313045 R 644223 CDS PAS_chr1-1_0405 254565905 8196535 complement(join(1313906..1314286,1314352..1314360)) 1 NC_012963.1 Subunit of the heterohexameric cochaperone prefoldin complex 1314360 8196535 PAS_chr1-1_0405 Pichia pastoris GS115 Subunit of the heterohexameric cochaperone prefoldin complex XP_002490063.1 1313906 R 644223 CDS PAS_chr1-1_0406 254565907 8196536 complement(1315259..1317223) 1 NC_012963.1 hypothetical protein 1317223 8196536 PAS_chr1-1_0406 Pichia pastoris GS115 hypothetical protein XP_002490064.1 1315259 R 644223 CDS PAS_chr1-1_0407 254565909 8196537 1318767..1319300 1 NC_012963.1 hypothetical protein 1319300 8196537 PAS_chr1-1_0407 Pichia pastoris GS115 hypothetical protein XP_002490065.1 1318767 D 644223 CDS PAS_chr1-1_0408 254565911 8196538 complement(1319354..1320874) 1 NC_012963.1 Flavin-containing monooxygenase, localized to the cytoplasmic face of the ER membrane 1320874 8196538 PAS_chr1-1_0408 Pichia pastoris GS115 Flavin-containing monooxygenase, localized to the cytoplasmic face of the ER membrane XP_002490066.1 1319354 R 644223 CDS PAS_chr1-1_0409 254565913 8196539 complement(1321019..1324342) 1 NC_012963.1 Karyopherin beta, mediates nuclear import of ribosomal proteins 1324342 8196539 PAS_chr1-1_0409 Pichia pastoris GS115 Karyopherin beta, mediates nuclear import of ribosomal proteins XP_002490067.1 1321019 R 644223 CDS PAS_chr1-1_0410 254565915 8196540 complement(join(1324569..1324684,1324753..1324838,1324888..1324904)) 1 NC_012963.1 Vacuolar ATPase assembly integral membrane protein VMA21 1324904 8196540 PAS_chr1-1_0410 Pichia pastoris GS115 Vacuolar ATPase assembly integral membrane protein VMA21 XP_002490068.1 1324569 R 644223 CDS PAS_chr1-1_0411 254565917 8196541 1325160..1326479 1 NC_012963.1 C-14 sterol reductase, acts in ergosterol biosynthesis 1326479 8196541 PAS_chr1-1_0411 Pichia pastoris GS115 C-14 sterol reductase, acts in ergosterol biosynthesis XP_002490069.1 1325160 D 644223 CDS PAS_chr1-1_0412 254565919 8196542 complement(1326518..1327363) 1 NC_012963.1 hypothetical protein 1327363 8196542 PAS_chr1-1_0412 Pichia pastoris GS115 hypothetical protein XP_002490070.1 1326518 R 644223 CDS PAS_chr1-1_0413 254565921 8196543 1327411..1328226 1 NC_012963.1 hypothetical protein 1328226 8196543 PAS_chr1-1_0413 Pichia pastoris GS115 hypothetical protein XP_002490071.1 1327411 D 644223 CDS PAS_chr1-1_0414 254565923 8196544 complement(1329630..1330268) 1 NC_012963.1 Nuclear protein involved in asymmetric localization of ASH1 mRNA 1330268 8196544 PAS_chr1-1_0414 Pichia pastoris GS115 Nuclear protein involved in asymmetric localization of ASH1 mRNA XP_002490072.1 1329630 R 644223 CDS PAS_chr1-1_0415 254565925 8196545 complement(1330389..1331033) 1 NC_012963.1 hypothetical protein 1331033 8196545 PAS_chr1-1_0415 Pichia pastoris GS115 hypothetical protein XP_002490073.1 1330389 R 644223 CDS PAS_chr1-1_0416 254565927 8196546 1331237..1332274 1 NC_012963.1 Pre-mRNA splicing factor 1332274 8196546 PAS_chr1-1_0416 Pichia pastoris GS115 Pre-mRNA splicing factor XP_002490074.1 1331237 D 644223 CDS PAS_chr1-1_0502 254565929 8196547 1332364..1333005 1 NC_012963.1 hypothetical protein 1333005 8196547 PAS_chr1-1_0502 Pichia pastoris GS115 hypothetical protein XP_002490075.1 1332364 D 644223 CDS PAS_chr1-1_0417 254565931 8197941 1333228..1334064 1 NC_012963.1 Putative transmembrane protein involved in export of ammonia 1334064 8197941 PAS_chr1-1_0417 Pichia pastoris GS115 Putative transmembrane protein involved in export of ammonia XP_002490076.1 1333228 D 644223 CDS PAS_chr1-1_0418 254565933 8196548 1334493..1335278 1 NC_012963.1 Acetate transporter required for normal sporulation 1335278 8196548 PAS_chr1-1_0418 Pichia pastoris GS115 Acetate transporter required for normal sporulation XP_002490077.1 1334493 D 644223 CDS PAS_chr1-1_0419 254565935 8196549 complement(1335356..1336714) 1 NC_012963.1 Acyl-coenzymeA:ethanol O-acyltransferase 1336714 8196549 PAS_chr1-1_0419 Pichia pastoris GS115 Acyl-coenzymeA:ethanol O-acyltransferase XP_002490078.1 1335356 R 644223 CDS PAS_chr1-1_0420 254565937 8196550 1337162..1337983 1 NC_012963.1 Phosphatidylserine synthase, functions in phospholipid biosynthesis 1337983 8196550 PAS_chr1-1_0420 Pichia pastoris GS115 Phosphatidylserine synthase, functions in phospholipid biosynthesis XP_002490079.1 1337162 D 644223 CDS PAS_chr1-1_0421 254565939 8196551 complement(1338068..1339186) 1 NC_012963.1 Mitochondrial inner membrane protein required for assembly of cytochrome c oxidase (complex IV) 1339186 8196551 PAS_chr1-1_0421 Pichia pastoris GS115 Mitochondrial inner membrane protein required for assembly of cytochrome c oxidase (complex IV) XP_002490080.1 1338068 R 644223 CDS PAS_chr1-1_0422 254565941 8196552 complement(1339821..1340792) 1 NC_012963.1 hypothetical protein 1340792 8196552 PAS_chr1-1_0422 Pichia pastoris GS115 hypothetical protein XP_002490081.1 1339821 R 644223 CDS PAS_chr1-1_0423 254565943 8196553 1341319..1341948 1 NC_012963.1 hypothetical protein 1341948 8196553 PAS_chr1-1_0423 Pichia pastoris GS115 hypothetical protein XP_002490082.1 1341319 D 644223 CDS PAS_chr1-1_0424 254565945 8196554 complement(1341962..1342801) 1 NC_012963.1 Cis-prenyltransferase involved in synthesis of long-chain dolichols 1342801 8196554 PAS_chr1-1_0424 Pichia pastoris GS115 Cis-prenyltransferase involved in synthesis of long-chain dolichols XP_002490083.1 1341962 R 644223 CDS PAS_chr1-1_0425 254565947 8196555 1343228..1345105 1 NC_012963.1 hypothetical protein 1345105 8196555 PAS_chr1-1_0425 Pichia pastoris GS115 hypothetical protein XP_002490084.1 1343228 D 644223 CDS PAS_chr1-1_0426 254565949 8196556 complement(1345163..1345870) 1 NC_012963.1 hypothetical protein 1345870 8196556 PAS_chr1-1_0426 Pichia pastoris GS115 hypothetical protein XP_002490085.1 1345163 R 644223 CDS PAS_chr1-1_0427 254565951 8196557 1346243..1346932 1 NC_012963.1 hypothetical protein 1346932 8196557 PAS_chr1-1_0427 Pichia pastoris GS115 hypothetical protein XP_002490086.1 1346243 D 644223 CDS PAS_chr1-1_0428 254565953 8196558 complement(1347055..1350324) 1 NC_012963.1 P-type ATPase sodium pump, involved in Na+ and Li+ efflux to allow salt tolerance 1350324 8196558 PAS_chr1-1_0428 Pichia pastoris GS115 P-type ATPase sodium pump, involved in Na+ and Li+ efflux to allow salt tolerance XP_002490087.1 1347055 R 644223 CDS PAS_chr1-1_0430 254565955 8196559 1351341..1352972 1 NC_012963.1 Phosphoribosylpyrophosphate amidotransferase 1352972 8196559 PAS_chr1-1_0430 Pichia pastoris GS115 Phosphoribosylpyrophosphate amidotransferase XP_002490088.1 1351341 D 644223 CDS PAS_chr1-1_0431 254565957 8196560 complement(1353908..1354519) 1 NC_012963.1 hypothetical protein 1354519 8196560 PAS_chr1-1_0431 Pichia pastoris GS115 hypothetical protein XP_002490089.1 1353908 R 644223 CDS PAS_chr1-1_0432 254565959 8196561 1354701..1355897 1 NC_012963.1 Acetohydroxyacid reductoisomerase 1355897 8196561 PAS_chr1-1_0432 Pichia pastoris GS115 Acetohydroxyacid reductoisomerase XP_002490090.1 1354701 D 644223 CDS PAS_chr1-1_0433 254565961 8196562 1356287..1356967 1 NC_012963.1 Mitochondrial peroxiredoxin (1-Cys Prx) with thioredoxin peroxidase activity 1356967 8196562 PAS_chr1-1_0433 Pichia pastoris GS115 Mitochondrial peroxiredoxin (1-Cys Prx) with thioredoxin peroxidase activity XP_002490091.1 1356287 D 644223 CDS PAS_chr1-1_0434 254565963 8196563 complement(1357988..1359235) 1 NC_012963.1 Zinc finger protein involved in control of meiosis 1359235 8196563 PAS_chr1-1_0434 Pichia pastoris GS115 Zinc finger protein involved in control of meiosis XP_002490092.1 1357988 R 644223 CDS PAS_chr1-1_0435 254565965 8196564 1360444..1362138 1 NC_012963.1 Putative ubiquitin carboxyl-terminal hydrolase, ubiquitin-specific proteas 1362138 8196564 PAS_chr1-1_0435 Pichia pastoris GS115 Putative ubiquitin carboxyl-terminal hydrolase, ubiquitin-specific proteas XP_002490093.1 1360444 D 644223 CDS PAS_chr1-1_0436 254565967 8196565 complement(1362316..1363299) 1 NC_012963.1 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP 1363299 8196565 PAS_chr1-1_0436 Pichia pastoris GS115 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP XP_002490094.1 1362316 R 644223 CDS PAS_chr1-1_0437 254565969 8196566 1363801..1364544 1 NC_012963.1 Ubiquitin-conjugating enzyme involved in ER-associated protein degradation 1364544 8196566 PAS_chr1-1_0437 Pichia pastoris GS115 Ubiquitin-conjugating enzyme involved in ER-associated protein degradation XP_002490095.1 1363801 D 644223 CDS PAS_chr1-1_0438 254565971 8196567 complement(1364793..1365011) 1 NC_012963.1 Zn-ribbon protein 1365011 8196567 PAS_chr1-1_0438 Pichia pastoris GS115 Zn-ribbon protein XP_002490096.1 1364793 R 644223 CDS PAS_chr1-1_0439 254565973 8196568 1365340..1365942 1 NC_012963.1 Protein component of the small (40S) ribosomal subunit 1365942 8196568 PAS_chr1-1_0439 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002490097.1 1365340 D 644223 CDS PAS_chr1-1_0440 254565975 8196569 1366881..1367222 1 NC_012963.1 hypothetical protein 1367222 8196569 PAS_chr1-1_0440 Pichia pastoris GS115 hypothetical protein XP_002490098.1 1366881 D 644223 CDS PAS_chr1-1_0441 254565977 8196570 1368744..1369823 1 NC_012963.1 hypothetical protein 1369823 8196570 PAS_chr1-1_0441 Pichia pastoris GS115 hypothetical protein XP_002490099.1 1368744 D 644223 CDS PAS_chr1-1_0442 254565979 8196571 1370597..1371682 1 NC_012963.1 Protein related to mammalian high mobility group proteins 1371682 8196571 PAS_chr1-1_0442 Pichia pastoris GS115 Protein related to mammalian high mobility group proteins XP_002490100.1 1370597 D 644223 CDS PAS_chr1-1_0443 254565981 8196572 complement(1371736..1379406) 1 NC_012963.1 Component of the small-subunit (SSU) processome 1379406 8196572 PAS_chr1-1_0443 Pichia pastoris GS115 Component of the small-subunit (SSU) processome XP_002490101.1 1371736 R 644223 CDS PAS_chr1-1_0444 254565983 8196573 1379579..1380814 1 NC_012963.1 Cytoplasmic protein required for sporulation 1380814 8196573 PAS_chr1-1_0444 Pichia pastoris GS115 Cytoplasmic protein required for sporulation XP_002490102.1 1379579 D 644223 CDS PAS_chr1-1_0445 254565985 8197581 complement(join(1381421..1381608,1381670..1381775,1381821..1381862)) 1 NC_012963.1 hypothetical protein 1381862 8197581 PAS_chr1-1_0445 Pichia pastoris GS115 hypothetical protein XP_002490103.1 1381421 R 644223 CDS PAS_chr1-1_0446 254565987 8197582 1382842..1384023 1 NC_012963.1 Protein involved in an early, nucleolar step of 60S ribosomal subunit biogenesis 1384023 8197582 PAS_chr1-1_0446 Pichia pastoris GS115 Protein involved in an early, nucleolar step of 60S ribosomal subunit biogenesis XP_002490104.1 1382842 D 644223 CDS PAS_chr1-1_0447 254565989 8196649 complement(1384076..1385179) 1 NC_012963.1 Saccharopine dehydrogenase (NAD+, L-lysine-forming) 1385179 8196649 PAS_chr1-1_0447 Pichia pastoris GS115 Saccharopine dehydrogenase (NAD+, L-lysine-forming) XP_002490105.1 1384076 R 644223 CDS PAS_chr1-1_0448 254565991 8197890 1387695..1388372 1 NC_012963.1 Pyridoxine (pyridoxamine) phosphate oxidase, has homologs in E. coli and Myxococcus xanthus 1388372 8197890 PAS_chr1-1_0448 Pichia pastoris GS115 Pyridoxine (pyridoxamine) phosphate oxidase, has homologs in E. coli and Myxococcus xanthus XP_002490106.1 1387695 D 644223 CDS PAS_chr1-1_0449 254565993 8197891 complement(1388444..1389049) 1 NC_012963.1 Protein with similarity to members of a family of flavodoxin-like proteins 1389049 8197891 PAS_chr1-1_0449 Pichia pastoris GS115 Protein with similarity to members of a family of flavodoxin-like proteins XP_002490107.1 1388444 R 644223 CDS PAS_chr1-1_0450 254565995 8197892 complement(1389450..1390490) 1 NC_012963.1 Subunit of a complex with Ctf8p and Ctf18p that shares some components with Replication Factor C 1390490 8197892 PAS_chr1-1_0450 Pichia pastoris GS115 Subunit of a complex with Ctf8p and Ctf18p that shares some components with Replication Factor C XP_002490108.1 1389450 R 644223 CDS PAS_chr1-1_0451 254565997 8197893 1390637..1393735 1 NC_012963.1 Protein involved in bud-site selection and required for axial budding pattern 1393735 8197893 PAS_chr1-1_0451 Pichia pastoris GS115 Protein involved in bud-site selection and required for axial budding pattern XP_002490109.1 1390637 D 644223 CDS PAS_chr1-1_0453 254565999 8197894 complement(1394412..1395749) 1 NC_012963.1 Poly(A+) RNA-binding protein, involved in the export of mRNAs from the nucleus to the cytoplasm 1395749 8197894 PAS_chr1-1_0453 Pichia pastoris GS115 Poly(A+) RNA-binding protein, involved in the export of mRNAs from the nucleus to the cytoplasm XP_002490110.1 1394412 R 644223 CDS PAS_chr1-1_0454 254566001 8197895 complement(1395870..1396574) 1 NC_012963.1 SaGa associated Factor 29kDa 1396574 8197895 PAS_chr1-1_0454 Pichia pastoris GS115 SaGa associated Factor 29kDa XP_002490111.1 1395870 R 644223 CDS PAS_chr1-1_0455 254566003 8197896 1396933..1398060 1 NC_012963.1 Mitochondrial ribosomal protein of the large subunit 1398060 8197896 PAS_chr1-1_0455 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002490112.1 1396933 D 644223 CDS PAS_chr1-1_0456 254566005 8197897 complement(1398066..1398557) 1 NC_012963.1 hypothetical protein 1398557 8197897 PAS_chr1-1_0456 Pichia pastoris GS115 hypothetical protein XP_002490113.1 1398066 R 644223 CDS PAS_chr1-1_0457 254566007 8197898 1398779..1400422 1 NC_012963.1 Phosphatidylinositol-4-phosphate 5-kinase 1400422 8197898 PAS_chr1-1_0457 Pichia pastoris GS115 Phosphatidylinositol-4-phosphate 5-kinase XP_002490114.1 1398779 D 644223 CDS PAS_chr1-4_0001 254566009 8197899 1404184..1404378 1 NC_012963.1 hypothetical protein 1404378 8197899 PAS_chr1-4_0001 Pichia pastoris GS115 hypothetical protein XP_002490115.1 1404184 D 644223 CDS PAS_chr1-4_0002 254566011 8196842 join(1409376..1409424,1409479..1409864) 1 NC_012963.1 hypothetical protein 1409864 8196842 PAS_chr1-4_0002 Pichia pastoris GS115 hypothetical protein XP_002490116.1 1409376 D 644223 CDS PAS_chr1-4_0003 254566013 8196843 1410073..1411221 1 NC_012963.1 Mevalonate pyrophosphate decarboxylase 1411221 8196843 PAS_chr1-4_0003 Pichia pastoris GS115 Mevalonate pyrophosphate decarboxylase XP_002490117.1 1410073 D 644223 CDS PAS_chr1-4_0004 254566015 8196844 1411360..1412352 1 NC_012963.1 hypothetical protein 1412352 8196844 PAS_chr1-4_0004 Pichia pastoris GS115 hypothetical protein XP_002490118.1 1411360 D 644223 CDS PAS_chr1-4_0005 254566017 8196845 complement(1412384..1412899) 1 NC_012963.1 hypothetical protein 1412899 8196845 PAS_chr1-4_0005 Pichia pastoris GS115 hypothetical protein XP_002490119.1 1412384 R 644223 CDS PAS_chr1-4_0006 254566019 8196846 complement(1413582..1415132) 1 NC_012963.1 mitochondrial inner membrane protein 1415132 8196846 PAS_chr1-4_0006 Pichia pastoris GS115 mitochondrial inner membrane protein XP_002490120.1 1413582 R 644223 CDS PAS_chr1-4_0007 254566021 8196847 1415824..1417242 1 NC_012963.1 Cytoplasmic DExD/H-box helicase 1417242 8196847 PAS_chr1-4_0007 Pichia pastoris GS115 Cytoplasmic DExD/H-box helicase XP_002490121.1 1415824 D 644223 CDS PAS_chr1-4_0008 254566023 8196848 1417673..1418953 1 NC_012963.1 MAP kinase 1418953 8196848 PAS_chr1-4_0008 Pichia pastoris GS115 MAP kinase XP_002490122.1 1417673 D 644223 CDS PAS_chr1-4_0009 254566025 8196849 complement(1418972..1420222) 1 NC_012963.1 Dihydrofolate synthetase 1420222 8196849 PAS_chr1-4_0009 Pichia pastoris GS115 Dihydrofolate synthetase XP_002490123.1 1418972 R 644223 CDS PAS_chr1-4_0010 254566027 8196850 1420621..1422633 1 NC_012963.1 Beta-adaptin, large subunit of the clathrin-associated protein (AP-1) complex 1422633 8196850 PAS_chr1-4_0010 Pichia pastoris GS115 Beta-adaptin, large subunit of the clathrin-associated protein (AP-1) complex XP_002490124.1 1420621 D 644223 CDS PAS_chr1-4_0653 254566029 8196851 1422946..1424550 1 NC_012963.1 hypothetical protein 1424550 8196851 PAS_chr1-4_0653 Pichia pastoris GS115 hypothetical protein XP_002490125.1 1422946 D 644223 CDS PAS_chr1-4_0011 254566031 8197862 complement(join(1426201..1427234,1427461..1427875)) 1 NC_012963.1 hypothetical protein 1427875 8197862 PAS_chr1-4_0011 Pichia pastoris GS115 hypothetical protein XP_002490126.1 1426201 R 644223 CDS PAS_chr1-4_0012 254566033 8196852 1428052..1431084 1 NC_012963.1 TFIID subunit (145 kDa) 1431084 8196852 PAS_chr1-4_0012 Pichia pastoris GS115 TFIID subunit (145 kDa) XP_002490127.1 1428052 D 644223 CDS PAS_chr1-4_0013 254566035 8196853 complement(1431269..1432840) 1 NC_012963.1 carboxypeptidase Y 1432840 8196853 PAS_chr1-4_0013 Pichia pastoris GS115 carboxypeptidase Y XP_002490128.1 1431269 R 644223 CDS PAS_chr1-4_0014 254566037 8196854 join(1433261..1433470,1433500..1434201) 1 NC_012963.1 hypothetical protein 1434201 8196854 PAS_chr1-4_0014 Pichia pastoris GS115 hypothetical protein XP_002490129.1 1433261 D 644223 CDS PAS_chr1-4_0015 254566039 8196855 1434346..1437462 1 NC_012963.1 GTPase 1437462 8196855 PAS_chr1-4_0015 Pichia pastoris GS115 GTPase XP_002490130.1 1434346 D 644223 CDS PAS_chr1-4_0016 254566041 8196856 complement(1437486..1439153) 1 NC_012963.1 hypothetical protein 1439153 8196856 PAS_chr1-4_0016 Pichia pastoris GS115 hypothetical protein XP_002490131.1 1437486 R 644223 CDS PAS_chr1-4_0017 254566043 8196857 complement(join(1439265..1440843,1440935..1441146)) 1 NC_012963.1 Vacuolar endopolyphosphatase with a role in phosphate metabolism 1441146 8196857 PAS_chr1-4_0017 Pichia pastoris GS115 Vacuolar endopolyphosphatase with a role in phosphate metabolism XP_002490132.1 1439265 R 644223 CDS PAS_chr1-4_0018 254566045 8196858 1441496..1441813 1 NC_012963.1 hypothetical protein 1441813 8196858 PAS_chr1-4_0018 Pichia pastoris GS115 hypothetical protein XP_002490133.1 1441496 D 644223 CDS PAS_chr1-4_0019 254566047 8196859 1442252..1443895 1 NC_012963.1 Phosphatidylserine decarboxylase of the mitochondrial inner membrane 1443895 8196859 PAS_chr1-4_0019 Pichia pastoris GS115 Phosphatidylserine decarboxylase of the mitochondrial inner membrane XP_002490134.1 1442252 D 644223 CDS PAS_chr1-4_0020 254566049 8196860 complement(1443917..1448479) 1 NC_012963.1 Largest subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) 1448479 8196860 PAS_chr1-4_0020 Pichia pastoris GS115 Largest subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) XP_002490135.1 1443917 R 644223 CDS PAS_chr1-4_0021 254566051 8196861 join(1448588..1448632,1448895..1449785) 1 NC_012963.1 CBK1 kinase activator protein MOB2 1449785 8196861 PAS_chr1-4_0021 Pichia pastoris GS115 CBK1 kinase activator protein MOB2 XP_002490136.1 1448588 D 644223 CDS PAS_chr1-4_0022 254566053 8196862 complement(1449992..1453957) 1 NC_012963.1 Mitochondrial RNA polymerase 1453957 8196862 PAS_chr1-4_0022 Pichia pastoris GS115 Mitochondrial RNA polymerase XP_002490137.1 1449992 R 644223 CDS PAS_chr1-4_0023 254566055 8196863 1454341..1455039 1 NC_012963.1 One of four subunits of the endosomal sorting complex required for transport III (ESCRT-III) 1455039 8196863 PAS_chr1-4_0023 Pichia pastoris GS115 One of four subunits of the endosomal sorting complex required for transport III (ESCRT-III) XP_002490138.1 1454341 D 644223 CDS PAS_chr1-4_0024 254566057 8196864 complement(1455303..1456202) 1 NC_012963.1 cis-Golgi t-SNARE syntaxin required for vesicular transport between the ER and the Golgi complex 1456202 8196864 PAS_chr1-4_0024 Pichia pastoris GS115 cis-Golgi t-SNARE syntaxin required for vesicular transport between the ER and the Golgi complex XP_002490139.1 1455303 R 644223 CDS PAS_chr1-4_0025 254566059 8196865 complement(1456479..1456976) 1 NC_012963.1 Frataxin, regulates mitochondrial iron accumulation 1456976 8196865 PAS_chr1-4_0025 Pichia pastoris GS115 Frataxin, regulates mitochondrial iron accumulation XP_002490140.1 1456479 R 644223 CDS PAS_chr1-4_0026 254566061 8196866 complement(1457095..1458363) 1 NC_012963.1 hypothetical protein 1458363 8196866 PAS_chr1-4_0026 Pichia pastoris GS115 hypothetical protein XP_002490141.1 1457095 R 644223 CDS PAS_chr1-4_0027 254566063 8196867 complement(join(1458578..1458995,1459453..1459526)) 1 NC_012963.1 Cofilin, promotes actin filament depolarization in a pH-dependent manner 1459526 8196867 PAS_chr1-4_0027 Pichia pastoris GS115 Cofilin, promotes actin filament depolarization in a pH-dependent manner XP_002490142.1 1458578 R 644223 CDS PAS_chr1-4_0028 254566065 8196868 complement(1459833..1462349) 1 NC_012963.1 hypothetical protein 1462349 8196868 PAS_chr1-4_0028 Pichia pastoris GS115 hypothetical protein XP_002490143.1 1459833 R 644223 CDS PAS_chr1-4_0029 254566067 8196869 1462684..1463880 1 NC_012963.1 tRNA-specific 2-thiouridylase, responsible for 2-thiolation of the wobble base of mitochondrial tRNA 1463880 8196869 PAS_chr1-4_0029 Pichia pastoris GS115 tRNA-specific 2-thiouridylase, responsible for 2-thiolation of the wobble base of mitochondrial tRNA XP_002490144.1 1462684 D 644223 CDS PAS_chr1-4_0030 254566069 8196870 1464317..1465774 1 NC_012963.1 Putative K+/H+ antiporter with a probable role in intracellular cation homeostasis 1465774 8196870 PAS_chr1-4_0030 Pichia pastoris GS115 Putative K+/H+ antiporter with a probable role in intracellular cation homeostasis XP_002490145.1 1464317 D 644223 CDS PAS_chr1-4_0034 254566071 8196871 complement(1475185..1476117) 1 NC_012963.1 hypothetical protein 1476117 8196871 PAS_chr1-4_0034 Pichia pastoris GS115 hypothetical protein XP_002490146.1 1475185 R 644223 CDS PAS_chr1-4_0035 254566073 8196872 1476241..1478748 1 NC_012963.1 hypothetical protein 1478748 8196872 PAS_chr1-4_0035 Pichia pastoris GS115 hypothetical protein XP_002490147.1 1476241 D 644223 CDS PAS_chr1-4_0036 254566075 8196873 complement(1479062..1480693) 1 NC_012963.1 hypothetical protein 1480693 8196873 PAS_chr1-4_0036 Pichia pastoris GS115 hypothetical protein XP_002490148.1 1479062 R 644223 CDS PAS_chr1-4_0037 254566077 8196874 complement(1481336..1483387) 1 NC_012963.1 Alpha-1,2-mannosyltransferase 1483387 8196874 PAS_chr1-4_0037 Pichia pastoris GS115 Alpha-1,2-mannosyltransferase XP_002490149.1 1481336 R 644223 CDS PAS_chr1-4_0038 254566079 8196875 1483606..1484202 1 NC_012963.1 Transcription elongation factor S-II 1484202 8196875 PAS_chr1-4_0038 Pichia pastoris GS115 Transcription elongation factor S-II XP_002490150.1 1483606 D 644223 CDS PAS_chr1-4_0039 254566081 8196876 1484475..1484810 1 NC_012963.1 hypothetical protein 1484810 8196876 PAS_chr1-4_0039 Pichia pastoris GS115 hypothetical protein XP_002490151.1 1484475 D 644223 CDS PAS_chr1-4_0040 254566083 8196877 complement(1485260..1486357) 1 NC_012963.1 High affinity iron permease involved in the transport of iron across the plasma membrane 1486357 8196877 PAS_chr1-4_0040 Pichia pastoris GS115 High affinity iron permease involved in the transport of iron across the plasma membrane XP_002490152.1 1485260 R 644223 CDS PAS_chr1-4_0041 254566085 8196878 1487440..1489314 1 NC_012963.1 Multicopper oxidase, integral membrane protein with similarity to Fet3p 1489314 8196878 PAS_chr1-4_0041 Pichia pastoris GS115 Multicopper oxidase, integral membrane protein with similarity to Fet3p XP_002490153.1 1487440 D 644223 CDS PAS_chr1-4_0042 254566087 8196879 1489445..1490341 1 NC_012963.1 Glucose-6-phosphate 1-epimerase (hexose-6-phosphate mutarotase) 1490341 8196879 PAS_chr1-4_0042 Pichia pastoris GS115 Glucose-6-phosphate 1-epimerase (hexose-6-phosphate mutarotase) XP_002490154.1 1489445 D 644223 CDS PAS_chr1-4_0043 254566089 8196880 complement(join(1490397..1490980,1491130..1491148)) 1 NC_012963.1 Co-chaperone that binds to and regulates Hsp90 family chaperones 1491148 8196880 PAS_chr1-4_0043 Pichia pastoris GS115 Co-chaperone that binds to and regulates Hsp90 family chaperones XP_002490155.1 1490397 R 644223 CDS PAS_chr1-4_0044 254566091 8196881 1491368..1493215 1 NC_012963.1 hypothetical protein 1493215 8196881 PAS_chr1-4_0044 Pichia pastoris GS115 hypothetical protein XP_002490156.1 1491368 D 644223 CDS PAS_chr1-4_0045 254566093 8196882 complement(1493324..1494463) 1 NC_012963.1 RNA binding protein with similarity to hnRNP-K that localizes to the cytoplasm and subtelomeric DNA 1494463 8196882 PAS_chr1-4_0045 Pichia pastoris GS115 RNA binding protein with similarity to hnRNP-K that localizes to the cytoplasm and subtelomeric DNA XP_002490157.1 1493324 R 644223 CDS PAS_chr1-4_0046 254566095 8196883 1495025..1495561 1 NC_012963.1 hypothetical protein 1495561 8196883 PAS_chr1-4_0046 Pichia pastoris GS115 hypothetical protein XP_002490158.1 1495025 D 644223 CDS PAS_chr1-4_0047 254566097 8196884 join(1496126..1498556,1498627..1498952) 1 NC_012963.1 Beta subunit of heterooctameric phosphofructokinase involved in glycolysis 1498952 8196884 PAS_chr1-4_0047 Pichia pastoris GS115 Beta subunit of heterooctameric phosphofructokinase involved in glycolysis XP_002490159.1 1496126 D 644223 CDS PAS_chr1-4_0048 254566099 8197268 1499478..1500254 1 NC_012963.1 Possible rhomboid protease, has similarity to eukaryotic rhomboid proteases including Pcp1p 1500254 8197268 PAS_chr1-4_0048 Pichia pastoris GS115 Possible rhomboid protease, has similarity to eukaryotic rhomboid proteases including Pcp1p XP_002490160.1 1499478 D 644223 CDS PAS_chr1-4_0049 254566101 8197269 complement(1500282..1501370) 1 NC_012963.1 Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), dimeric enzyme 1501370 8197269 PAS_chr1-4_0049 Pichia pastoris GS115 Homoserine dehydrogenase (L-homoserine:NADP oxidoreductase), dimeric enzyme XP_002490161.1 1500282 R 644223 CDS PAS_chr1-4_0050 254566103 8197270 complement(1501521..1502783) 1 NC_012963.1 Putative mannosyltransferase involved in protein glycosylation 1502783 8197270 PAS_chr1-4_0050 Pichia pastoris GS115 Putative mannosyltransferase involved in protein glycosylation XP_002490162.1 1501521 R 644223 CDS PAS_chr1-4_0051 254566105 8197271 complement(1503280..1509723) 1 NC_012963.1 RNA-dependent ATPase RNA helicase (DEIH box) 1509723 8197271 PAS_chr1-4_0051 Pichia pastoris GS115 RNA-dependent ATPase RNA helicase (DEIH box) XP_002490163.1 1503280 R 644223 CDS PAS_chr1-4_0052 254566107 8197272 1509854..1510822 1 NC_012963.1 hypothetical protein 1510822 8197272 PAS_chr1-4_0052 Pichia pastoris GS115 hypothetical protein XP_002490164.1 1509854 D 644223 CDS PAS_chr1-4_0053 254566109 8197273 1510962..1512152 1 NC_012963.1 hypothetical protein 1512152 8197273 PAS_chr1-4_0053 Pichia pastoris GS115 hypothetical protein XP_002490165.1 1510962 D 644223 CDS PAS_chr1-4_0054 254566111 8197274 complement(1512257..1513333) 1 NC_012963.1 G1 cyclin involved in cell cycle progression 1513333 8197274 PAS_chr1-4_0054 Pichia pastoris GS115 G1 cyclin involved in cell cycle progression XP_002490166.1 1512257 R 644223 CDS PAS_chr1-4_0055 254566113 8197275 1514806..1516236 1 NC_012963.1 Clavaminate synthase 1516236 8197275 PAS_chr1-4_0055 Pichia pastoris GS115 Clavaminate synthase XP_002490167.1 1514806 D 644223 CDS PAS_chr1-4_0057 254566115 8197276 1517663..1519030 1 NC_012963.1 hypothetical protein 1519030 8197276 PAS_chr1-4_0057 Pichia pastoris GS115 hypothetical protein XP_002490168.1 1517663 D 644223 CDS PAS_chr1-4_0058 254566117 8197277 complement(join(1519170..1519957,1520046..1521315)) 1 NC_012963.1 Mitochondrial protein with similarity to flavoprotein-type oxidoreductases 1521315 8197277 PAS_chr1-4_0058 Pichia pastoris GS115 Mitochondrial protein with similarity to flavoprotein-type oxidoreductases XP_002490169.1 1519170 R 644223 CDS PAS_chr1-4_0059 254566119 8197278 1521569..1523359 1 NC_012963.1 RNA-binding protein that interacts with the C-terminal domain of the RNA polymerase II large subunit 1523359 8197278 PAS_chr1-4_0059 Pichia pastoris GS115 RNA-binding protein that interacts with the C-terminal domain of the RNA polymerase II large subunit XP_002490170.1 1521569 D 644223 CDS PAS_chr1-4_0061 254566121 8197279 complement(join(1523759..1524118,1524148..1524495)) 1 NC_012963.1 hypothetical protein 1524495 8197279 PAS_chr1-4_0061 Pichia pastoris GS115 hypothetical protein XP_002490171.1 1523759 R 644223 CDS PAS_chr1-4_0062 254566123 8197280 1524717..1526081 1 NC_012963.1 hypothetical protein 1526081 8197280 PAS_chr1-4_0062 Pichia pastoris GS115 hypothetical protein XP_002490172.1 1524717 D 644223 CDS PAS_chr1-4_0654 254566125 8197281 1526267..1527739 1 NC_012963.1 hypothetical protein 1527739 8197281 PAS_chr1-4_0654 Pichia pastoris GS115 hypothetical protein XP_002490173.1 1526267 D 644223 CDS PAS_chr1-4_0063 254566127 8197863 complement(join(1527782..1528210,1528462..1528937,1529022..1529067)) 1 NC_012963.1 G-protein beta subunit and guanine nucleotide dissociation inhibitor for Gpa2p 1529067 8197863 PAS_chr1-4_0063 Pichia pastoris GS115 G-protein beta subunit and guanine nucleotide dissociation inhibitor for Gpa2p XP_002490174.1 1527782 R 644223 CDS PAS_chr1-4_0064 254566129 8197282 complement(1529882..1531420) 1 NC_012963.1 Putative fatty aldehyde dehydrogenase 1531420 8197282 PAS_chr1-4_0064 Pichia pastoris GS115 Putative fatty aldehyde dehydrogenase XP_002490175.1 1529882 R 644223 CDS PAS_chr1-4_0066 254566131 8197283 1532069..1535155 1 NC_012963.1 Effector of Rab GTPase Sec4p, forms a complex with Sec4p and t-SNARE Sec9p 1535155 8197283 PAS_chr1-4_0066 Pichia pastoris GS115 Effector of Rab GTPase Sec4p, forms a complex with Sec4p and t-SNARE Sec9p XP_002490176.1 1532069 D 644223 CDS PAS_chr1-4_0067 254566133 8197284 1535392..1537014 1 NC_012963.1 F-Box protein 1537014 8197284 PAS_chr1-4_0067 Pichia pastoris GS115 F-Box protein XP_002490177.1 1535392 D 644223 CDS PAS_chr1-4_0068 254566135 8197285 1537117..1537680 1 NC_012963.1 hypothetical protein 1537680 8197285 PAS_chr1-4_0068 Pichia pastoris GS115 hypothetical protein XP_002490178.1 1537117 D 644223 CDS PAS_chr1-4_0069 254566137 8197286 complement(1537764..1540181) 1 NC_012963.1 Protein kinase with similarity to mammalian phosphoinositide-dependent kinase 1 (PDK1) 1540181 8197286 PAS_chr1-4_0069 Pichia pastoris GS115 Protein kinase with similarity to mammalian phosphoinositide-dependent kinase 1 (PDK1) XP_002490179.1 1537764 R 644223 CDS PAS_chr1-4_0070 254566139 8197287 complement(1540774..1540977) 1 NC_012963.1 hypothetical protein 1540977 8197287 PAS_chr1-4_0070 Pichia pastoris GS115 hypothetical protein XP_002490180.1 1540774 R 644223 CDS PAS_chr1-4_0071 254566141 8197288 1541148..1541819 1 NC_012963.1 Mitochondrial superoxide dismutase, protects cells against oxygen toxicity 1541819 8197288 PAS_chr1-4_0071 Pichia pastoris GS115 Mitochondrial superoxide dismutase, protects cells against oxygen toxicity XP_002490181.1 1541148 D 644223 CDS PAS_chr1-4_0072 254566143 8197289 complement(1541912..1542916) 1 NC_012963.1 Co-chaperone that binds to Hsp82p and activates its ATPase activity 1542916 8197289 PAS_chr1-4_0072 Pichia pastoris GS115 Co-chaperone that binds to Hsp82p and activates its ATPase activity XP_002490182.1 1541912 R 644223 CDS PAS_chr1-4_0073 254566145 8197290 1543316..1544857 1 NC_012963.1 hypothetical protein 1544857 8197290 PAS_chr1-4_0073 Pichia pastoris GS115 hypothetical protein XP_002490183.1 1543316 D 644223 CDS PAS_chr1-4_0074 254566147 8197291 complement(1544969..1547233) 1 NC_012963.1 Outer mitochondrial carnitine acetyltransferase, minor ethanol-inducible enzyme 1547233 8197291 PAS_chr1-4_0074 Pichia pastoris GS115 Outer mitochondrial carnitine acetyltransferase, minor ethanol-inducible enzyme XP_002490184.1 1544969 R 644223 CDS PAS_chr1-4_0075 254566149 8197292 complement(1547588..1548832) 1 NC_012963.1 L-rhamnonate dehydratase 1548832 8197292 PAS_chr1-4_0075 Pichia pastoris GS115 L-rhamnonate dehydratase XP_002490185.1 1547588 R 644223 CDS PAS_chr1-4_0076 254566151 8197293 complement(1549044..1550111) 1 NC_012963.1 hypothetical protein 1550111 8197293 PAS_chr1-4_0076 Pichia pastoris GS115 hypothetical protein XP_002490186.1 1549044 R 644223 CDS PAS_chr1-4_0077 254566153 8197294 complement(1550263..1551105) 1 NC_012963.1 Integral membrane protein required for efficient mating 1551105 8197294 PAS_chr1-4_0077 Pichia pastoris GS115 Integral membrane protein required for efficient mating XP_002490187.1 1550263 R 644223 CDS PAS_chr1-4_0078 254566155 8197295 complement(1551854..1553884) 1 NC_012963.1 Multidrug transporter of the major facilitator superfamily 1553884 8197295 PAS_chr1-4_0078 Pichia pastoris GS115 Multidrug transporter of the major facilitator superfamily XP_002490188.1 1551854 R 644223 CDS PAS_chr1-4_0079 254566157 8197296 1554556..1555737 1 NC_012963.1 hypothetical protein 1555737 8197296 PAS_chr1-4_0079 Pichia pastoris GS115 hypothetical protein XP_002490189.1 1554556 D 644223 CDS PAS_chr1-4_0080 254566159 8197297 complement(1555752..1557638) 1 NC_012963.1 Fatty acid transporter and very long-chain fatty acyl-CoA synthetase 1557638 8197297 PAS_chr1-4_0080 Pichia pastoris GS115 Fatty acid transporter and very long-chain fatty acyl-CoA synthetase XP_002490190.1 1555752 R 644223 CDS PAS_chr1-4_0081 254566161 8197298 1557817..1559484 1 NC_012963.1 Protein phosphatase required for mitotic exit 1559484 8197298 PAS_chr1-4_0081 Pichia pastoris GS115 Protein phosphatase required for mitotic exit XP_002490191.1 1557817 D 644223 CDS PAS_chr1-4_0082 254566163 8197299 complement(1559533..1561029) 1 NC_012963.1 hypothetical protein 1561029 8197299 PAS_chr1-4_0082 Pichia pastoris GS115 hypothetical protein XP_002490192.1 1559533 R 644223 CDS PAS_chr1-4_0083 254566165 8197300 1561473..1562861 1 NC_012963.1 Putative tryptophan 2,3-dioxygenase or indoleamine 2,3-dioxygenase 1562861 8197300 PAS_chr1-4_0083 Pichia pastoris GS115 Putative tryptophan 2,3-dioxygenase or indoleamine 2,3-dioxygenase XP_002490193.1 1561473 D 644223 CDS PAS_chr1-4_0084 254566167 8197301 complement(1562958..1563383) 1 NC_012963.1 Chromatin modification-related protein EAF6 1563383 8197301 PAS_chr1-4_0084 Pichia pastoris GS115 Chromatin modification-related protein EAF6 XP_002490194.1 1562958 R 644223 CDS PAS_chr1-4_0085 254566169 8197302 1563564..1564778 1 NC_012963.1 Actin-related protein 1564778 8197302 PAS_chr1-4_0085 Pichia pastoris GS115 Actin-related protein XP_002490195.1 1563564 D 644223 CDS PAS_chr1-4_0086 254566171 8197303 1565819..1566832 1 NC_012963.1 hypothetical protein 1566832 8197303 PAS_chr1-4_0086 Pichia pastoris GS115 hypothetical protein XP_002490196.1 1565819 D 644223 CDS PAS_chr1-4_0087 254566173 8197304 complement(1566838..1568076) 1 NC_012963.1 hypothetical protein 1568076 8197304 PAS_chr1-4_0087 Pichia pastoris GS115 hypothetical protein XP_002490197.1 1566838 R 644223 CDS PAS_chr1-4_0088 254566175 8197305 1568656..1569141 1 NC_012963.1 hypothetical protein 1569141 8197305 PAS_chr1-4_0088 Pichia pastoris GS115 hypothetical protein XP_002490198.1 1568656 D 644223 CDS PAS_chr1-4_0089 254566177 8197306 1569340..1571841 1 NC_012963.1 hypothetical protein 1571841 8197306 PAS_chr1-4_0089 Pichia pastoris GS115 hypothetical protein XP_002490199.1 1569340 D 644223 CDS PAS_chr1-4_0090 254566179 8197307 complement(1571910..1573784) 1 NC_012963.1 Polyamine transport protein specific for spermine 1573784 8197307 PAS_chr1-4_0090 Pichia pastoris GS115 Polyamine transport protein specific for spermine XP_002490200.1 1571910 R 644223 CDS PAS_chr1-4_0091 254566181 8197308 complement(1574597..1575250) 1 NC_012963.1 hypothetical protein 1575250 8197308 PAS_chr1-4_0091 Pichia pastoris GS115 hypothetical protein XP_002490201.1 1574597 R 644223 CDS PAS_chr1-4_0092 254566183 8197309 1575359..1576141 1 NC_012963.1 exosome component 1576141 8197309 PAS_chr1-4_0092 Pichia pastoris GS115 exosome component XP_002490202.1 1575359 D 644223 CDS PAS_chr1-4_0093 254566185 8197310 complement(1576159..1578831) 1 NC_012963.1 Phosphatidylethanolamine methyltransferase (PEMT) 1578831 8197310 PAS_chr1-4_0093 Pichia pastoris GS115 Phosphatidylethanolamine methyltransferase (PEMT) XP_002490203.1 1576159 R 644223 CDS PAS_chr1-4_0094 254566187 8197311 complement(join(1579107..1580028,1580117..1580184)) 1 NC_012963.1 GTP binding protein 1580184 8197311 PAS_chr1-4_0094 Pichia pastoris GS115 GTP binding protein XP_002490204.1 1579107 R 644223 CDS PAS_chr1-4_0655 254566189 8197312 complement(1580381..1581181) 1 NC_012963.1 tRNA wybutosine-synthesizing protein 1581181 8197312 PAS_chr1-4_0655 Pichia pastoris GS115 tRNA wybutosine-synthesizing protein XP_002490205.1 1580381 R 644223 CDS PAS_chr1-4_0095 254566191 8197864 1581298..1582965 1 NC_012963.1 Cytoplasmic aspartyl-tRNA synthetase, homodimeric enzyme 1582965 8197864 PAS_chr1-4_0095 Pichia pastoris GS115 Cytoplasmic aspartyl-tRNA synthetase, homodimeric enzyme XP_002490206.1 1581298 D 644223 CDS PAS_chr1-4_0096 254566193 8197313 complement(1583030..1585321) 1 NC_012963.1 Plasma membrane Mg(2+) transporter, expression and turnover are regulated by Mg(2+) concentration 1585321 8197313 PAS_chr1-4_0096 Pichia pastoris GS115 Plasma membrane Mg(2+) transporter, expression and turnover are regulated by Mg(2+) concentration XP_002490207.1 1583030 R 644223 CDS PAS_chr1-4_0097 254566195 8197314 complement(1586983..1587300) 1 NC_012963.1 hypothetical protein 1587300 8197314 PAS_chr1-4_0097 Pichia pastoris GS115 hypothetical protein XP_002490208.1 1586983 R 644223 CDS PAS_chr1-4_0098 254566197 8197315 1587945..1589618 1 NC_012963.1 Essential nucleolar protein required for 40S ribosome biogenesis 1589618 8197315 PAS_chr1-4_0098 Pichia pastoris GS115 Essential nucleolar protein required for 40S ribosome biogenesis XP_002490209.1 1587945 D 644223 CDS PAS_chr1-4_0099 254566199 8197316 complement(1589648..1591372) 1 NC_012963.1 Component of the SPS plasma membrane amino acid sensor system (Ssy1p-Ptr3p-Ssy5p) 1591372 8197316 PAS_chr1-4_0099 Pichia pastoris GS115 Component of the SPS plasma membrane amino acid sensor system (Ssy1p-Ptr3p-Ssy5p) XP_002490210.1 1589648 R 644223 CDS PAS_chr1-4_0100 254566201 8197317 1591585..1592997 1 NC_012963.1 hypothetical protein 1592997 8197317 PAS_chr1-4_0100 Pichia pastoris GS115 hypothetical protein XP_002490211.1 1591585 D 644223 CDS PAS_chr1-4_0101 254566203 8197318 1593329..1594999 1 NC_012963.1 Phosphorylated vacuolar membrane protein that interacts with Atg13p 1594999 8197318 PAS_chr1-4_0101 Pichia pastoris GS115 Phosphorylated vacuolar membrane protein that interacts with Atg13p XP_002490212.1 1593329 D 644223 CDS PAS_chr1-4_0102 254566205 8197319 complement(1595114..1596592) 1 NC_012963.1 Myb-like DNA-binding protein 1596592 8197319 PAS_chr1-4_0102 Pichia pastoris GS115 Myb-like DNA-binding protein XP_002490213.1 1595114 R 644223 CDS PAS_chr1-4_0104 254566207 8197320 1598407..1599762 1 NC_012963.1 Probable mitochondrial seryl-tRNA synthetase 1599762 8197320 PAS_chr1-4_0104 Pichia pastoris GS115 Probable mitochondrial seryl-tRNA synthetase XP_002490214.1 1598407 D 644223 CDS PAS_chr1-4_0105 254566209 8197321 complement(join(1599806..1602102,1602215..1603292)) 1 NC_012963.1 Involved in vesicular transport, mediates transport between an endosomal compartment and the golgi 1603292 8197321 PAS_chr1-4_0105 Pichia pastoris GS115 Involved in vesicular transport, mediates transport between an endosomal compartment and the golgi XP_002490215.1 1599806 R 644223 CDS PAS_chr1-4_0106 254566211 8197322 complement(1603488..1604741) 1 NC_012963.1 Arginine methyltransferase 1604741 8197322 PAS_chr1-4_0106 Pichia pastoris GS115 Arginine methyltransferase XP_002490216.1 1603488 R 644223 CDS PAS_chr1-4_0107 254566213 8197323 complement(1604935..1608849) 1 NC_012963.1 Membrane bound guanine nucleotide exchange factor (GEF or GDP-release factor) 1608849 8197323 PAS_chr1-4_0107 Pichia pastoris GS115 Membrane bound guanine nucleotide exchange factor (GEF or GDP-release factor) XP_002490217.1 1604935 R 644223 CDS PAS_chr1-4_0108 254566215 8197324 1609599..1611752 1 NC_012963.1 Exonuclease component of the nuclear exosome 1611752 8197324 PAS_chr1-4_0108 Pichia pastoris GS115 Exonuclease component of the nuclear exosome XP_002490218.1 1609599 D 644223 CDS PAS_chr1-4_0109 254566217 8197325 1611979..1612752 1 NC_012963.1 Protein involved in iron metabolism in mitochondria 1612752 8197325 PAS_chr1-4_0109 Pichia pastoris GS115 Protein involved in iron metabolism in mitochondria XP_002490219.1 1611979 D 644223 CDS PAS_chr1-4_0110 254566219 8197326 complement(1612795..1613076) 1 NC_012963.1 pterin-4-alpha-carbinolamine dehydratase 1613076 8197326 PAS_chr1-4_0110 Pichia pastoris GS115 pterin-4-alpha-carbinolamine dehydratase XP_002490220.1 1612795 R 644223 CDS PAS_chr1-4_0111 254566221 8197327 complement(1613120..1613311) 1 NC_012963.1 hypothetical protein 1613311 8197327 PAS_chr1-4_0111 Pichia pastoris GS115 hypothetical protein XP_002490221.1 1613120 R 644223 CDS PAS_chr1-4_0112 254566223 8197328 1613399..1615096 1 NC_012963.1 Mu1-like medium subunit of the clathrin-associated protein complex (AP-1) 1615096 8197328 PAS_chr1-4_0112 Pichia pastoris GS115 Mu1-like medium subunit of the clathrin-associated protein complex (AP-1) XP_002490222.1 1613399 D 644223 CDS PAS_chr1-4_0113 254566225 8197329 1615288..1616343 1 NC_012963.1 hypothetical protein 1616343 8197329 PAS_chr1-4_0113 Pichia pastoris GS115 hypothetical protein XP_002490223.1 1615288 D 644223 CDS PAS_chr1-4_0114 254566227 8197330 complement(1616380..1619796) 1 NC_012963.1 hypothetical protein 1619796 8197330 PAS_chr1-4_0114 Pichia pastoris GS115 hypothetical protein XP_002490224.1 1616380 R 644223 CDS PAS_chr1-4_0115 254566229 8197331 1619958..1620821 1 NC_012963.1 hypothetical protein 1620821 8197331 PAS_chr1-4_0115 Pichia pastoris GS115 hypothetical protein XP_002490225.1 1619958 D 644223 CDS PAS_chr1-4_0116 254566231 8197332 complement(1620832..1621956) 1 NC_012963.1 hypothetical protein 1621956 8197332 PAS_chr1-4_0116 Pichia pastoris GS115 hypothetical protein XP_002490226.1 1620832 R 644223 CDS PAS_chr1-4_0117 254566233 8197333 1622183..1622773 1 NC_012963.1 Beta 4 subunit of the 20S proteasome 1622773 8197333 PAS_chr1-4_0117 Pichia pastoris GS115 Beta 4 subunit of the 20S proteasome XP_002490227.1 1622183 D 644223 CDS PAS_chr1-4_0118 254566235 8197334 1623048..1626065 1 NC_012963.1 DEAH-box RNA-dependent ATPase/ATP-dependent RNA helicase 1626065 8197334 PAS_chr1-4_0118 Pichia pastoris GS115 DEAH-box RNA-dependent ATPase/ATP-dependent RNA helicase XP_002490228.1 1623048 D 644223 CDS PAS_chr1-4_0119 254566237 8197335 complement(1626518..1627531) 1 NC_012963.1 Essential protein involved in the TOR signaling pathway 1627531 8197335 PAS_chr1-4_0119 Pichia pastoris GS115 Essential protein involved in the TOR signaling pathway XP_002490229.1 1626518 R 644223 CDS PAS_chr1-4_0120 254566239 8197336 complement(1627718..1628215) 1 NC_012963.1 Protein localized to COPII vesicles, proposed to be involved in ER to Golgi transport 1628215 8197336 PAS_chr1-4_0120 Pichia pastoris GS115 Protein localized to COPII vesicles, proposed to be involved in ER to Golgi transport XP_002490230.1 1627718 R 644223 CDS PAS_chr1-4_0121 254566241 8197337 complement(join(1628452..1628701,1628759..1628800,1628859..1628899)) 1 NC_012963.1 Transcription initiation factor IIA small subunit 1628899 8197337 PAS_chr1-4_0121 Pichia pastoris GS115 Transcription initiation factor IIA small subunit XP_002490231.1 1628452 R 644223 CDS PAS_chr1-4_0122 254566243 8197338 1629128..1630288 1 NC_012963.1 Essential conserved subunit of CPF (cleavage and polyadenylation factor) 1630288 8197338 PAS_chr1-4_0122 Pichia pastoris GS115 Essential conserved subunit of CPF (cleavage and polyadenylation factor) XP_002490232.1 1629128 D 644223 CDS PAS_chr1-4_0123 254566245 8197339 complement(1630321..1631649) 1 NC_012963.1 hypothetical protein 1631649 8197339 PAS_chr1-4_0123 Pichia pastoris GS115 hypothetical protein XP_002490233.1 1630321 R 644223 CDS PAS_chr1-4_0124 254566247 8197340 1632073..1633365 1 NC_012963.1 Mitochondrial NADH kinase, phosphorylates NADH 1633365 8197340 PAS_chr1-4_0124 Pichia pastoris GS115 Mitochondrial NADH kinase, phosphorylates NADH XP_002490234.1 1632073 D 644223 CDS PAS_chr1-4_0125 254566249 8197341 complement(join(1633397..1634769,1634855..1634912)) 1 NC_012963.1 Histone deacetylase 1634912 8197341 PAS_chr1-4_0125 Pichia pastoris GS115 Histone deacetylase XP_002490235.1 1633397 R 644223 CDS PAS_chr1-4_0126 254566251 8197342 complement(1635085..1636158) 1 NC_012963.1 Palmitoyltransferase for Vac8p, required for vacuolar membrane fusion 1636158 8197342 PAS_chr1-4_0126 Pichia pastoris GS115 Palmitoyltransferase for Vac8p, required for vacuolar membrane fusion XP_002490236.1 1635085 R 644223 CDS PAS_chr1-4_0128 254566253 8197343 complement(join(1636335..1636695,1636763..1641138)) 1 NC_012963.1 Essential protein required for determination of budding pattern 1641138 8197343 PAS_chr1-4_0128 Pichia pastoris GS115 Essential protein required for determination of budding pattern XP_002490237.1 1636335 R 644223 CDS PAS_chr1-4_0129 254566255 8197344 1641467..1643998 1 NC_012963.1 hypothetical protein 1643998 8197344 PAS_chr1-4_0129 Pichia pastoris GS115 hypothetical protein XP_002490238.1 1641467 D 644223 CDS PAS_chr1-4_0130 254566257 8197345 1644458..1646578 1 NC_012963.1 Heat shock protein Hsp90 1646578 8197345 PAS_chr1-4_0130 Pichia pastoris GS115 Heat shock protein Hsp90 XP_002490239.1 1644458 D 644223 CDS PAS_chr1-4_0131 254566259 8197115 complement(1646637..1647419) 1 NC_012963.1 hypothetical protein 1647419 8197115 PAS_chr1-4_0131 Pichia pastoris GS115 hypothetical protein XP_002490240.1 1646637 R 644223 CDS PAS_chr1-4_0132 254566261 8197116 1648134..1649588 1 NC_012963.1 Protein with similarity to mammalian monocarboxylate permease 1649588 8197116 PAS_chr1-4_0132 Pichia pastoris GS115 Protein with similarity to mammalian monocarboxylate permease XP_002490241.1 1648134 D 644223 CDS PAS_chr1-4_0133 254566263 8197117 1650258..1653758 1 NC_012963.1 AAA-peroxin that heterodimerizes with AAA-peroxin Pex1p 1653758 8197117 PAS_chr1-4_0133 Pichia pastoris GS115 AAA-peroxin that heterodimerizes with AAA-peroxin Pex1p XP_002490242.1 1650258 D 644223 CDS PAS_chr1-4_0134 254566265 8197118 1654035..1655738 1 NC_012963.1 Core component of the signal recognition particle (SRP) ribonucleoprotein (RNP) complex 1655738 8197118 PAS_chr1-4_0134 Pichia pastoris GS115 Core component of the signal recognition particle (SRP) ribonucleoprotein (RNP) complex XP_002490243.1 1654035 D 644223 CDS PAS_chr1-4_0135 254566267 8197119 1655916..1656767 1 NC_012963.1 Beta subunit of the translation initiation factor eIF2 1656767 8197119 PAS_chr1-4_0135 Pichia pastoris GS115 Beta subunit of the translation initiation factor eIF2 XP_002490244.1 1655916 D 644223 CDS PAS_chr1-4_0136 254566269 8197120 complement(1656860..1658152) 1 NC_012963.1 Membrane-associated RING finger protein 5 1658152 8197120 PAS_chr1-4_0136 Pichia pastoris GS115 Membrane-associated RING finger protein 5 XP_002490245.1 1656860 R 644223 CDS PAS_chr1-4_0137 254566271 8197121 complement(1658400..1658954) 1 NC_012963.1 hypothetical protein 1658954 8197121 PAS_chr1-4_0137 Pichia pastoris GS115 hypothetical protein XP_002490246.1 1658400 R 644223 CDS PAS_chr1-4_0138 254566273 8197122 1659285..1662047 1 NC_012963.1 hypothetical protein 1662047 8197122 PAS_chr1-4_0138 Pichia pastoris GS115 hypothetical protein XP_002490247.1 1659285 D 644223 CDS PAS_chr1-4_0139 254566275 8197123 complement(1662059..1663267) 1 NC_012963.1 Widely conserved NADPH oxidoreductase containing flavin mononucleotide (FMN) 1663267 8197123 PAS_chr1-4_0139 Pichia pastoris GS115 Widely conserved NADPH oxidoreductase containing flavin mononucleotide (FMN) XP_002490248.1 1662059 R 644223 CDS PAS_chr1-4_0140 254566277 8197124 1663708..1664280 1 NC_012963.1 hypothetical protein 1664280 8197124 PAS_chr1-4_0140 Pichia pastoris GS115 hypothetical protein XP_002490249.1 1663708 D 644223 CDS PAS_chr1-4_0141 254566279 8197125 complement(1664337..1666010) 1 NC_012963.1 Protein with similarity to hydroxymethylpyrimidine phosphate kinases 1666010 8197125 PAS_chr1-4_0141 Pichia pastoris GS115 Protein with similarity to hydroxymethylpyrimidine phosphate kinases XP_002490250.1 1664337 R 644223 CDS PAS_chr1-4_0142 254566281 8197126 1666341..1668851 1 NC_012963.1 Essential helicase component of heterohexameric MCM2-7 complexes 1668851 8197126 PAS_chr1-4_0142 Pichia pastoris GS115 Essential helicase component of heterohexameric MCM2-7 complexes XP_002490251.1 1666341 D 644223 CDS PAS_chr1-4_0143 254566283 8197127 1668996..1670930 1 NC_012963.1 Type II phosphatidylinositol 4-kinase that binds Las17p 1670930 8197127 PAS_chr1-4_0143 Pichia pastoris GS115 Type II phosphatidylinositol 4-kinase that binds Las17p XP_002490252.1 1668996 D 644223 CDS PAS_chr1-4_0144 254566285 8197128 1671033..1671986 1 NC_012963.1 pyridoxal kinase BUD16 1671986 8197128 PAS_chr1-4_0144 Pichia pastoris GS115 pyridoxal kinase BUD16 XP_002490253.1 1671033 D 644223 CDS PAS_chr1-4_0656 254566287 8197129 1672448..1675078 1 NC_012963.1 hypothetical protein 1675078 8197129 PAS_chr1-4_0656 Pichia pastoris GS115 hypothetical protein XP_002490254.1 1672448 D 644223 CDS PAS_chr1-4_0145 254566289 8197865 complement(1675093..1676079) 1 NC_012963.1 pirin 1676079 8197865 PAS_chr1-4_0145 Pichia pastoris GS115 pirin XP_002490255.1 1675093 R 644223 CDS PAS_chr1-4_0146 254566291 8197130 complement(1676384..1677607) 1 NC_012963.1 hypothetical protein 1677607 8197130 PAS_chr1-4_0146 Pichia pastoris GS115 hypothetical protein XP_002490256.1 1676384 R 644223 CDS PAS_chr1-4_0147 254566293 8197131 1678143..1679417 1 NC_012963.1 eukaryotic translation initiation factor 3 subunit 1679417 8197131 PAS_chr1-4_0147 Pichia pastoris GS115 eukaryotic translation initiation factor 3 subunit XP_002490257.1 1678143 D 644223 CDS PAS_chr1-4_0148 254566295 8197132 complement(1679485..1680123) 1 NC_012963.1 Mitochondrial ribosomal protein of the large subunit 1680123 8197132 PAS_chr1-4_0148 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002490258.1 1679485 R 644223 CDS PAS_chr1-4_0694 254566297 8197133 1680345..1680653 1 NC_012963.1 hypothetical protein 1680653 8197133 PAS_chr1-4_0694 Pichia pastoris GS115 hypothetical protein XP_002490259.1 1680345 D 644223 CDS PAS_chr1-4_0149 254566299 8197438 complement(1680673..1681713) 1 NC_012963.1 3-ketosphinganine reductase, catalyzes the second step in phytosphingosine synthesis 1681713 8197438 PAS_chr1-4_0149 Pichia pastoris GS115 3-ketosphinganine reductase, catalyzes the second step in phytosphingosine synthesis XP_002490260.1 1680673 R 644223 CDS PAS_chr1-4_0150 254566301 8197134 1682276..1684315 1 NC_012963.1 Transketolase, similar to Tkl2p 1684315 8197134 PAS_chr1-4_0150 Pichia pastoris GS115 Transketolase, similar to Tkl2p XP_002490261.1 1682276 D 644223 CDS PAS_chr1-4_0151 254566303 8197135 1684500..1684970 1 NC_012963.1 Protein phosphotyrosine phosphatase 1684970 8197135 PAS_chr1-4_0151 Pichia pastoris GS115 Protein phosphotyrosine phosphatase XP_002490262.1 1684500 D 644223 CDS PAS_chr1-4_0152 254566305 8197136 complement(join(1684990..1686829,1686934..1686956)) 1 NC_012963.1 Subunit of the CCR4-NOT complex, which is a global transcriptional regulator with roles in transcrip 1686956 8197136 PAS_chr1-4_0152 Pichia pastoris GS115 Subunit of the CCR4-NOT complex, which is a global transcriptional regulator with roles in transcrip XP_002490263.1 1684990 R 644223 CDS PAS_chr1-4_0153 254566307 8197137 1687273..1691475 1 NC_012963.1 Alpha aminoadipate reductase 1691475 8197137 PAS_chr1-4_0153 Pichia pastoris GS115 Alpha aminoadipate reductase XP_002490264.1 1687273 D 644223 CDS PAS_chr1-4_0154 254566309 8197138 complement(1691500..1693950) 1 NC_012963.1 Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p) 1693950 8197138 PAS_chr1-4_0154 Pichia pastoris GS115 Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p) XP_002490265.1 1691500 R 644223 CDS PAS_chr1-4_0155 254566311 8197139 complement(1694310..1697363) 1 NC_012963.1 hypothetical protein 1697363 8197139 PAS_chr1-4_0155 Pichia pastoris GS115 hypothetical protein XP_002490266.1 1694310 R 644223 CDS PAS_chr1-4_0156 254566313 8197140 1698288..1698761 1 NC_012963.1 hypothetical protein 1698761 8197140 PAS_chr1-4_0156 Pichia pastoris GS115 hypothetical protein XP_002490267.1 1698288 D 644223 CDS PAS_chr1-4_0157 254566315 8197141 complement(1698855..1699292) 1 NC_012963.1 hypothetical protein 1699292 8197141 PAS_chr1-4_0157 Pichia pastoris GS115 hypothetical protein XP_002490268.1 1698855 R 644223 CDS PAS_chr1-4_0158 254566317 8197142 complement(1699476..1700129) 1 NC_012963.1 Clathrin light chain 1700129 8197142 PAS_chr1-4_0158 Pichia pastoris GS115 Clathrin light chain XP_002490269.1 1699476 R 644223 CDS PAS_chr1-4_0159 254566319 8197143 1700334..1701461 1 NC_012963.1 Protein that interacts with exonuclease Rat1p and Rai1p 1701461 8197143 PAS_chr1-4_0159 Pichia pastoris GS115 Protein that interacts with exonuclease Rat1p and Rai1p XP_002490270.1 1700334 D 644223 CDS PAS_chr1-4_0160 254566321 8197144 1701657..1704188 1 NC_012963.1 Multifunctional enzyme HIS4 1704188 8197144 PAS_chr1-4_0160 Pichia pastoris GS115 Multifunctional enzyme HIS4 XP_002490271.1 1701657 D 644223 CDS PAS_chr1-4_0161 254566323 8197145 1704314..1705489 1 NC_012963.1 Nuclear fusion protein BIK1 1705489 8197145 PAS_chr1-4_0161 Pichia pastoris GS115 Nuclear fusion protein BIK1 XP_002490272.1 1704314 D 644223 CDS PAS_chr1-4_0162 254566325 8197146 complement(join(1705574..1706136,1706203..1706260)) 1 NC_012963.1 GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5 1706260 8197146 PAS_chr1-4_0162 Pichia pastoris GS115 GTPase, similar to Ypt51p and Ypt53p and to mammalian rab5 XP_002490273.1 1705574 R 644223 CDS PAS_chr1-4_0163 254566327 8197147 complement(join(1706479..1706790,1706850..1706852)) 1 NC_012963.1 hypothetical protein 1706852 8197147 PAS_chr1-4_0163 Pichia pastoris GS115 hypothetical protein XP_002490274.1 1706479 R 644223 CDS PAS_chr1-4_0695 254566329 8197148 complement(1707044..1708903) 1 NC_012963.1 hypothetical protein 1708903 8197148 PAS_chr1-4_0695 Pichia pastoris GS115 hypothetical protein XP_002490275.1 1707044 R 644223 CDS PAS_chr1-4_0164 254566331 8197439 complement(1709049..1709936) 1 NC_012963.1 hypothetical protein 1709936 8197439 PAS_chr1-4_0164 Pichia pastoris GS115 hypothetical protein XP_002490276.1 1709049 R 644223 CDS PAS_chr1-4_0165 254566333 8197149 complement(1710304..1711431) 1 NC_012963.1 Class E protein of the vacuolar protein-sorting (Vps) pathway 1711431 8197149 PAS_chr1-4_0165 Pichia pastoris GS115 Class E protein of the vacuolar protein-sorting (Vps) pathway XP_002490277.1 1710304 R 644223 CDS PAS_chr1-4_0657 254566335 8197150 complement(join(1711537..1712121,1712140..1712175)) 1 NC_012963.1 Vacuolar protein sorting protein 1712175 8197150 PAS_chr1-4_0657 Pichia pastoris GS115 Vacuolar protein sorting protein XP_002490278.1 1711537 R 644223 CDS PAS_chr1-4_0658 254566337 8197866 complement(1712518..1713915) 1 NC_012963.1 hypothetical protein 1713915 8197866 PAS_chr1-4_0658 Pichia pastoris GS115 hypothetical protein XP_002490279.1 1712518 R 644223 CDS PAS_chr1-4_0166 254566339 8197867 join(1714424..1714511,1714595..1714981,1715402..1715487) 1 NC_012963.1 hypothetical protein 1715487 8197867 PAS_chr1-4_0166 Pichia pastoris GS115 hypothetical protein XP_002490280.1 1714424 D 644223 CDS PAS_chr1-4_0167 254566341 8197151 1715787..1716707 1 NC_012963.1 hypothetical protein 1716707 8197151 PAS_chr1-4_0167 Pichia pastoris GS115 hypothetical protein XP_002490281.1 1715787 D 644223 CDS PAS_chr1-4_0168 254566343 8197152 1716853..1717347 1 NC_012963.1 hypothetical protein 1717347 8197152 PAS_chr1-4_0168 Pichia pastoris GS115 hypothetical protein XP_002490282.1 1716853 D 644223 CDS PAS_chr1-4_0169 254566345 8197153 complement(1717389..1718795) 1 NC_012963.1 actin 1718795 8197153 PAS_chr1-4_0169 Pichia pastoris GS115 actin XP_002490283.1 1717389 R 644223 CDS PAS_chr1-4_0170 254566347 8197154 complement(1719109..1719696) 1 NC_012963.1 hypothetical protein 1719696 8197154 PAS_chr1-4_0170 Pichia pastoris GS115 hypothetical protein XP_002490284.1 1719109 R 644223 CDS PAS_chr1-4_0171 254566349 8197155 1719878..1720300 1 NC_012963.1 Mitochondrial ribosomal protein of the large subunit 1720300 8197155 PAS_chr1-4_0171 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002490285.1 1719878 D 644223 CDS PAS_chr1-4_0172 254566351 8197156 1720591..1722120 1 NC_012963.1 hypothetical protein 1722120 8197156 PAS_chr1-4_0172 Pichia pastoris GS115 hypothetical protein XP_002490286.1 1720591 D 644223 CDS PAS_chr1-4_0173 254566353 8197157 complement(1722149..1723666) 1 NC_012963.1 hypothetical protein 1723666 8197157 PAS_chr1-4_0173 Pichia pastoris GS115 hypothetical protein XP_002490287.1 1722149 R 644223 CDS PAS_chr1-4_0659 254566355 8197158 complement(1723815..1724327) 1 NC_012963.1 hypothetical protein 1724327 8197158 PAS_chr1-4_0659 Pichia pastoris GS115 hypothetical protein XP_002490288.1 1723815 R 644223 CDS PAS_chr1-4_0660 254566357 8197868 complement(1724574..1726805) 1 NC_012963.1 hypothetical protein 1726805 8197868 PAS_chr1-4_0660 Pichia pastoris GS115 hypothetical protein XP_002490289.1 1724574 R 644223 CDS PAS_chr1-4_0175 254566359 8197869 1727196..1729301 1 NC_012963.1 Mitochondrial inner membrane localized ATP-dependent DNA helicase 1729301 8197869 PAS_chr1-4_0175 Pichia pastoris GS115 Mitochondrial inner membrane localized ATP-dependent DNA helicase XP_002490290.1 1727196 D 644223 CDS PAS_chr1-4_0176 254566361 8197159 complement(1729313..1730092) 1 NC_012963.1 hypothetical protein 1730092 8197159 PAS_chr1-4_0176 Pichia pastoris GS115 hypothetical protein XP_002490291.1 1729313 R 644223 CDS PAS_chr1-4_0177 254566363 8197160 1730514..1732820 1 NC_012963.1 hypothetical protein 1732820 8197160 PAS_chr1-4_0177 Pichia pastoris GS115 hypothetical protein XP_002490292.1 1730514 D 644223 CDS PAS_chr1-4_0178 254566365 8197161 complement(1733449..1734096) 1 NC_012963.1 Vacuolar protein that presumably functions within the endosomal-vacuolar trafficking pathway 1734096 8197161 PAS_chr1-4_0178 Pichia pastoris GS115 Vacuolar protein that presumably functions within the endosomal-vacuolar trafficking pathway XP_002490293.1 1733449 R 644223 CDS PAS_chr1-4_0179 254566367 8197162 join(1734287..1734509,1734636..1735516) 1 NC_012963.1 Meiosis-specific protein that initiates meiotic recombination 1735516 8197162 PAS_chr1-4_0179 Pichia pastoris GS115 Meiosis-specific protein that initiates meiotic recombination XP_002490294.1 1734287 D 644223 CDS PAS_chr1-4_0181 254566369 8197163 1736816..1738060 1 NC_012963.1 Nicotinic acid mononucleotide adenylyltransferase, involved in pathways of NAD biosynthesis 1738060 8197163 PAS_chr1-4_0181 Pichia pastoris GS115 Nicotinic acid mononucleotide adenylyltransferase, involved in pathways of NAD biosynthesis XP_002490295.1 1736816 D 644223 CDS PAS_chr1-4_0182 254566371 8197164 complement(1738172..1738825) 1 NC_012963.1 Subunit (145 kDa) of TFIID and SAGA complexes 1738825 8197164 PAS_chr1-4_0182 Pichia pastoris GS115 Subunit (145 kDa) of TFIID and SAGA complexes XP_002490296.1 1738172 R 644223 CDS PAS_chr1-4_0183 254566373 8197165 1739483..1740214 1 NC_012963.1 TATA-binding protein, general transcription factor 1740214 8197165 PAS_chr1-4_0183 Pichia pastoris GS115 TATA-binding protein, general transcription factor XP_002490297.1 1739483 D 644223 CDS PAS_chr1-4_0184 254566375 8197166 complement(1741076..1743667) 1 NC_012963.1 Positive regulator of genes in multiple nitrogen degradation pathways 1743667 8197166 PAS_chr1-4_0184 Pichia pastoris GS115 Positive regulator of genes in multiple nitrogen degradation pathways XP_002490298.1 1741076 R 644223 CDS PAS_chr1-4_0185 254566377 8197167 complement(join(1744056..1744562,1744622..1744624)) 1 NC_012963.1 Subunit of the ARP2/3 complex 1744624 8197167 PAS_chr1-4_0185 Pichia pastoris GS115 Subunit of the ARP2/3 complex XP_002490299.1 1744056 R 644223 CDS PAS_chr1-4_0186 254566379 8197168 1745035..1746432 1 NC_012963.1 U1 snRNP protein involved in splicing 1746432 8197168 PAS_chr1-4_0186 Pichia pastoris GS115 U1 snRNP protein involved in splicing XP_002490300.1 1745035 D 644223 CDS PAS_chr1-4_0187 254566381 8197169 complement(1746445..1746960) 1 NC_012963.1 18kDa catalytic subunit of the Signal Peptidase Complex 1746960 8197169 PAS_chr1-4_0187 Pichia pastoris GS115 18kDa catalytic subunit of the Signal Peptidase Complex XP_002490301.1 1746445 R 644223 CDS PAS_chr1-4_0188 254566383 8197170 complement(1747153..1748340) 1 NC_012963.1 Nitric oxide oxidoreductase, flavohemoglobin involved in nitric oxide detoxification 1748340 8197170 PAS_chr1-4_0188 Pichia pastoris GS115 Nitric oxide oxidoreductase, flavohemoglobin involved in nitric oxide detoxification XP_002490302.1 1747153 R 644223 CDS PAS_chr1-4_0189 254566385 8197171 complement(1748897..1750096) 1 NC_012963.1 hypothetical protein 1750096 8197171 PAS_chr1-4_0189 Pichia pastoris GS115 hypothetical protein XP_002490303.1 1748897 R 644223 CDS PAS_chr1-4_0190 254566387 8197172 1751140..1752861 1 NC_012963.1 hypothetical protein 1752861 8197172 PAS_chr1-4_0190 Pichia pastoris GS115 hypothetical protein XP_002490304.1 1751140 D 644223 CDS PAS_chr1-4_0191 254566389 8197173 1752927..1755350 1 NC_012963.1 ATP-dependent RNA helicase, component of the mitochondrial degradosome along with the RNase Dss1p 1755350 8197173 PAS_chr1-4_0191 Pichia pastoris GS115 ATP-dependent RNA helicase, component of the mitochondrial degradosome along with the RNase Dss1p XP_002490305.1 1752927 D 644223 CDS PAS_chr1-4_0192 254566391 8197174 complement(1755407..1757473) 1 NC_012963.1 DDK (Dbf4-dependent kinase) catalytic subunit 1757473 8197174 PAS_chr1-4_0192 Pichia pastoris GS115 DDK (Dbf4-dependent kinase) catalytic subunit XP_002490306.1 1755407 R 644223 CDS PAS_chr1-4_0193 254566393 8197175 complement(1757635..1759320) 1 NC_012963.1 Protein involved in bud-site selection 1759320 8197175 PAS_chr1-4_0193 Pichia pastoris GS115 Protein involved in bud-site selection XP_002490307.1 1757635 R 644223 CDS PAS_chr1-4_0194 254566395 8197176 complement(1759527..1761260) 1 NC_012963.1 Polyamine transporter that recognizes spermine, putrescine, and spermidine 1761260 8197176 PAS_chr1-4_0194 Pichia pastoris GS115 Polyamine transporter that recognizes spermine, putrescine, and spermidine XP_002490308.1 1759527 R 644223 CDS PAS_chr1-4_0195 254566397 8197177 join(1761931..1763165,1763329..1764082) 1 NC_012963.1 Putative sulfate permease 1764082 8197177 PAS_chr1-4_0195 Pichia pastoris GS115 Putative sulfate permease XP_002490309.1 1761931 D 644223 CDS PAS_chr1-4_0196 254566399 8197178 complement(1764293..1765435) 1 NC_012963.1 Phosphatidylinositol 3,5-bisphosphate-binding protein 1765435 8197178 PAS_chr1-4_0196 Pichia pastoris GS115 Phosphatidylinositol 3,5-bisphosphate-binding protein XP_002490310.1 1764293 R 644223 CDS PAS_chr1-4_0197 254566401 8197179 complement(1765625..1767562) 1 NC_012963.1 Subunit of the anaphase-promoting complex/cyclosome (APC/C) 1767562 8197179 PAS_chr1-4_0197 Pichia pastoris GS115 Subunit of the anaphase-promoting complex/cyclosome (APC/C) XP_002490311.1 1765625 R 644223 CDS PAS_chr1-4_0198 254566403 8197180 complement(1767660..1768601) 1 NC_012963.1 Pantothenate synthase, also known as pantoate-beta-alanine ligase 1768601 8197180 PAS_chr1-4_0198 Pichia pastoris GS115 Pantothenate synthase, also known as pantoate-beta-alanine ligase XP_002490312.1 1767660 R 644223 CDS PAS_chr1-4_0199 254566405 8197181 1768829..1769254 1 NC_012963.1 hypothetical protein 1769254 8197181 PAS_chr1-4_0199 Pichia pastoris GS115 hypothetical protein XP_002490313.1 1768829 D 644223 CDS PAS_chr1-4_0200 254566407 8197182 complement(1769442..1769963) 1 NC_012963.1 hypothetical protein 1769963 8197182 PAS_chr1-4_0200 Pichia pastoris GS115 hypothetical protein XP_002490314.1 1769442 R 644223 CDS PAS_chr1-4_0201 254566409 8197183 1770619..1772181 1 NC_012963.1 WD40 repeat-containing subunit of the Set3C histone deacetylase complex 1772181 8197183 PAS_chr1-4_0201 Pichia pastoris GS115 WD40 repeat-containing subunit of the Set3C histone deacetylase complex XP_002490315.1 1770619 D 644223 CDS PAS_chr1-4_0202 254566411 8197184 complement(1772224..1773690) 1 NC_012963.1 Mitochondrial protein involved in protein import into the mitochondrial matrix 1773690 8197184 PAS_chr1-4_0202 Pichia pastoris GS115 Mitochondrial protein involved in protein import into the mitochondrial matrix XP_002490316.1 1772224 R 644223 CDS PAS_chr1-4_0203 254566413 8197185 1774259..1776319 1 NC_012963.1 Component of the evolutionarily conserved kinetochore-associated Ndc80 complex 1776319 8197185 PAS_chr1-4_0203 Pichia pastoris GS115 Component of the evolutionarily conserved kinetochore-associated Ndc80 complex XP_002490317.1 1774259 D 644223 CDS PAS_chr1-4_0204 254566415 8197186 complement(1776374..1778836) 1 NC_012963.1 Component of the holoenzyme form of RNA polymerase transcription factor TFIIH 1778836 8197186 PAS_chr1-4_0204 Pichia pastoris GS115 Component of the holoenzyme form of RNA polymerase transcription factor TFIIH XP_002490318.1 1776374 R 644223 CDS PAS_chr1-4_0205 254566417 8197187 1779231..1779527 1 NC_012963.1 Ubiquitin-like protein of the SUMO family 1779527 8197187 PAS_chr1-4_0205 Pichia pastoris GS115 Ubiquitin-like protein of the SUMO family XP_002490319.1 1779231 D 644223 CDS PAS_chr1-4_0693 254566419 8197188 complement(1779790..1781124) 1 NC_012963.1 hypothetical protein 1781124 8197188 PAS_chr1-4_0693 Pichia pastoris GS115 hypothetical protein XP_002490320.1 1779790 R 644223 CDS PAS_chr1-4_0206 254566421 8197437 complement(1781274..1782338) 1 NC_012963.1 Oleic acid-inducible, peroxisomal matrix localized lipase 1782338 8197437 PAS_chr1-4_0206 Pichia pastoris GS115 Oleic acid-inducible, peroxisomal matrix localized lipase XP_002490321.1 1781274 R 644223 CDS PAS_chr1-4_0207 254566423 8197189 1782600..1783091 1 NC_012963.1 Hydroperoxide and superoxide-radical responsive glutathione-dependent oxidoreductase 1783091 8197189 PAS_chr1-4_0207 Pichia pastoris GS115 Hydroperoxide and superoxide-radical responsive glutathione-dependent oxidoreductase XP_002490322.1 1782600 D 644223 CDS PAS_chr1-4_0661 254566425 8197190 complement(1783192..1786095) 1 NC_012963.1 hypothetical protein 1786095 8197190 PAS_chr1-4_0661 Pichia pastoris GS115 hypothetical protein XP_002490323.1 1783192 R 644223 CDS PAS_chr1-4_0208 254566427 8197870 complement(1786348..1787010) 1 NC_012963.1 RNA helicase 1787010 8197870 PAS_chr1-4_0208 Pichia pastoris GS115 RNA helicase XP_002490324.1 1786348 R 644223 CDS PAS_chr1-4_0662 254566429 8196885 complement(join(1787551..1788477,1788514..1788609)) 1 NC_012963.1 hypothetical protein 1788609 8196885 PAS_chr1-4_0662 Pichia pastoris GS115 hypothetical protein XP_002490325.1 1787551 R 644223 CDS PAS_chr1-4_0209 254566431 8197871 complement(1788775..1790292) 1 NC_012963.1 Mitochondrial ATP-dependent RNA helicase of the DEAD-box family 1790292 8197871 PAS_chr1-4_0209 Pichia pastoris GS115 Mitochondrial ATP-dependent RNA helicase of the DEAD-box family XP_002490326.1 1788775 R 644223 CDS PAS_chr1-4_0210 254566433 8196886 1790589..1792466 1 NC_012963.1 Core component of the signal recognition particle (SRP) ribonucleoprotein (RNP) complex 1792466 8196886 PAS_chr1-4_0210 Pichia pastoris GS115 Core component of the signal recognition particle (SRP) ribonucleoprotein (RNP) complex XP_002490327.1 1790589 D 644223 CDS PAS_chr1-4_0211 254566435 8196887 complement(1792566..1793111) 1 NC_012963.1 Nucleolar protein required for 60S ribosome subunit biogenesis 1793111 8196887 PAS_chr1-4_0211 Pichia pastoris GS115 Nucleolar protein required for 60S ribosome subunit biogenesis XP_002490328.1 1792566 R 644223 CDS PAS_chr1-4_0212 254566437 8196888 join(1793473..1793663,1793765..1795103) 1 NC_012963.1 tRNA:pseudouridine synthase, introduces pseudouridines at positions 26-28, 34-36, 65, and 67 of tRNA 1795103 8196888 PAS_chr1-4_0212 Pichia pastoris GS115 tRNA:pseudouridine synthase, introduces pseudouridines at positions 26-28, 34-36, 65, and 67 of tRNA XP_002490329.1 1793473 D 644223 CDS PAS_chr1-4_0213 254566439 8196889 complement(1795143..1797443) 1 NC_012963.1 hypothetical protein 1797443 8196889 PAS_chr1-4_0213 Pichia pastoris GS115 hypothetical protein XP_002490330.1 1795143 R 644223 CDS PAS_chr1-4_0215 254566441 8196890 complement(1798404..1800176) 1 NC_012963.1 Acetylglutamate synthase (glutamate N-acetyltransferase), mitochondrial enzyme 1800176 8196890 PAS_chr1-4_0215 Pichia pastoris GS115 Acetylglutamate synthase (glutamate N-acetyltransferase), mitochondrial enzyme XP_002490331.1 1798404 R 644223 CDS PAS_chr1-4_0216 254566443 8196891 complement(join(1800473..1800952,1801015..1801134)) 1 NC_012963.1 Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p) 1801134 8196891 PAS_chr1-4_0216 Pichia pastoris GS115 Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p) XP_002490332.1 1800473 R 644223 CDS PAS_chr1-4_0217 254566445 8196892 1801284..1802492 1 NC_012963.1 Putative S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family 1802492 8196892 PAS_chr1-4_0217 Pichia pastoris GS115 Putative S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family XP_002490333.1 1801284 D 644223 CDS PAS_chr1-4_0218 254566447 8196893 join(1802671..1802676,1802730..1803806) 1 NC_012963.1 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase 1803806 8196893 PAS_chr1-4_0218 Pichia pastoris GS115 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase XP_002490334.1 1802671 D 644223 CDS PAS_chr1-4_0219 254566449 8196894 complement(1804922..1806466) 1 NC_012963.1 One of two S. cerevisiae homologs (Sds23p and Sds24p) of the Schizosaccharomyces pombe Sds23 protein 1806466 8196894 PAS_chr1-4_0219 Pichia pastoris GS115 One of two S. cerevisiae homologs (Sds23p and Sds24p) of the Schizosaccharomyces pombe Sds23 protein XP_002490335.1 1804922 R 644223 CDS PAS_chr1-4_0220 254566451 8196895 complement(1808457..1810379) 1 NC_012963.1 Protein involved in transcription initiation at TATA-containing promoters 1810379 8196895 PAS_chr1-4_0220 Pichia pastoris GS115 Protein involved in transcription initiation at TATA-containing promoters XP_002490336.1 1808457 R 644223 CDS PAS_chr1-4_0222 254566453 8196896 1811581..1812405 1 NC_012963.1 Bifunctional dehydrogenase and ferrochelatase, involved in the biosynthesis of siroheme 1812405 8196896 PAS_chr1-4_0222 Pichia pastoris GS115 Bifunctional dehydrogenase and ferrochelatase, involved in the biosynthesis of siroheme XP_002490337.1 1811581 D 644223 CDS PAS_chr1-4_0223 254566455 8196897 complement(1812453..1813973) 1 NC_012963.1 RNA binding protein that negatively regulates growth rate 1813973 8196897 PAS_chr1-4_0223 Pichia pastoris GS115 RNA binding protein that negatively regulates growth rate XP_002490338.1 1812453 R 644223 CDS PAS_chr1-4_0224 254566457 8196898 1814374..1815300 1 NC_012963.1 hypothetical protein 1815300 8196898 PAS_chr1-4_0224 Pichia pastoris GS115 hypothetical protein XP_002490339.1 1814374 D 644223 CDS PAS_chr1-4_0225 254566459 8196899 complement(1815315..1815806) 1 NC_012963.1 ER-derived vesicles protein ERV14 1815806 8196899 PAS_chr1-4_0225 Pichia pastoris GS115 ER-derived vesicles protein ERV14 XP_002490340.1 1815315 R 644223 CDS PAS_chr1-4_0226 254566461 8196900 1816466..1817116 1 NC_012963.1 hypothetical protein 1817116 8196900 PAS_chr1-4_0226 Pichia pastoris GS115 hypothetical protein XP_002490341.1 1816466 D 644223 CDS PAS_chr1-4_0663 254566463 8196901 1817473..1818300 1 NC_012963.1 hypothetical protein 1818300 8196901 PAS_chr1-4_0663 Pichia pastoris GS115 hypothetical protein XP_002490342.1 1817473 D 644223 CDS PAS_chr1-4_0227 254566465 8197872 complement(1818326..1819375) 1 NC_012963.1 hypothetical protein 1819375 8197872 PAS_chr1-4_0227 Pichia pastoris GS115 hypothetical protein XP_002490343.1 1818326 R 644223 CDS PAS_chr1-4_0228 254566467 8196902 join(1819425..1819437,1819563..1819924) 1 NC_012963.1 Core Sm protein Sm D2 1819924 8196902 PAS_chr1-4_0228 Pichia pastoris GS115 Core Sm protein Sm D2 XP_002490344.1 1819425 D 644223 CDS PAS_chr1-4_0229 254566469 8196903 complement(1820444..1820917) 1 NC_012963.1 hypothetical protein 1820917 8196903 PAS_chr1-4_0229 Pichia pastoris GS115 hypothetical protein XP_002490345.1 1820444 R 644223 CDS PAS_chr1-4_0230 254566471 8196904 1821286..1823298 1 NC_012963.1 hypothetical protein 1823298 8196904 PAS_chr1-4_0230 Pichia pastoris GS115 hypothetical protein XP_002490346.1 1821286 D 644223 CDS PAS_chr1-4_0231 254566473 8196905 1823999..1827994 1 NC_012963.1 Essential phosphoprotein component (p150) of the COPII coat of secretory pathway vesicles 1827994 8196905 PAS_chr1-4_0231 Pichia pastoris GS115 Essential phosphoprotein component (p150) of the COPII coat of secretory pathway vesicles XP_002490347.1 1823999 D 644223 CDS PAS_chr1-4_0232 254566475 8196906 1828295..1831171 1 NC_012963.1 hypothetical protein 1831171 8196906 PAS_chr1-4_0232 Pichia pastoris GS115 hypothetical protein XP_002490348.1 1828295 D 644223 CDS PAS_chr1-4_0233 254566477 8196907 complement(1831236..1834538) 1 NC_012963.1 Putative aminophospholipid translocase (flippase) involved in endocytosis and vacuolar biogenesis 1834538 8196907 PAS_chr1-4_0233 Pichia pastoris GS115 Putative aminophospholipid translocase (flippase) involved in endocytosis and vacuolar biogenesis XP_002490349.1 1831236 R 644223 CDS PAS_chr1-4_0234 254566479 8196908 complement(join(1834756..1835597,1835679..1835730)) 1 NC_012963.1 ATP phosphoribosyltransferase (hexameric enzyme) catalyzes the first step in histidine biosynthesis 1835730 8196908 PAS_chr1-4_0234 Pichia pastoris GS115 ATP phosphoribosyltransferase (hexameric enzyme) catalyzes the first step in histidine biosynthesis XP_002490350.1 1834756 R 644223 CDS PAS_chr1-4_0235 254566481 8196909 1836006..1836209 1 NC_012963.1 Protein component of the small (40S) ribosomal subunit 1836209 8196909 PAS_chr1-4_0235 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002490351.1 1836006 D 644223 CDS PAS_chr1-4_0236 254566483 8196910 complement(1836338..1837750) 1 NC_012963.1 Pho85p cyclin of the Pho80p subfamily, forms a functional kinase complex with Pho85p 1837750 8196910 PAS_chr1-4_0236 Pichia pastoris GS115 Pho85p cyclin of the Pho80p subfamily, forms a functional kinase complex with Pho85p XP_002490352.1 1836338 R 644223 CDS PAS_chr1-4_0237 254566485 8196911 complement(join(1838322..1838501,1838573..1838668)) 1 NC_012963.1 hypothetical protein 1838668 8196911 PAS_chr1-4_0237 Pichia pastoris GS115 hypothetical protein XP_002490353.1 1838322 R 644223 CDS PAS_chr1-4_0238 254566487 8196912 join(1838832..1838912,1838984..1839352) 1 NC_012963.1 Mitochondrial protein involved in maintenance of the mitochondrial genome 1839352 8196912 PAS_chr1-4_0238 Pichia pastoris GS115 Mitochondrial protein involved in maintenance of the mitochondrial genome XP_002490354.1 1838832 D 644223 CDS PAS_chr1-4_0239 254566489 8196913 1839961..1840335 1 NC_012963.1 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl34Bp 1840335 8196913 PAS_chr1-4_0239 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl34Bp XP_002490355.1 1839961 D 644223 CDS PAS_chr1-4_0240 254566491 8196914 complement(1840616..1840792) 1 NC_012963.1 hypothetical protein 1840792 8196914 PAS_chr1-4_0240 Pichia pastoris GS115 hypothetical protein XP_002490356.1 1840616 R 644223 CDS PAS_chr1-4_0241 254566493 8196915 1840856..1841560 1 NC_012963.1 hypothetical protein 1841560 8196915 PAS_chr1-4_0241 Pichia pastoris GS115 hypothetical protein XP_002490357.1 1840856 D 644223 CDS PAS_chr1-4_0242 254566495 8196916 complement(1841670..1843016) 1 NC_012963.1 Putative mannosidase, GPI-anchored membrane protein 1843016 8196916 PAS_chr1-4_0242 Pichia pastoris GS115 Putative mannosidase, GPI-anchored membrane protein XP_002490358.1 1841670 R 644223 CDS PAS_chr1-4_0243 254566497 8196917 1843266..1844933 1 NC_012963.1 Threonine deaminase, catalyzes the first step in isoleucine biosynthesis 1844933 8196917 PAS_chr1-4_0243 Pichia pastoris GS115 Threonine deaminase, catalyzes the first step in isoleucine biosynthesis XP_002490359.1 1843266 D 644223 CDS PAS_chr1-4_0244 254566499 8196918 complement(1844997..1846511) 1 NC_012963.1 Epsin-like protein involved in endocytosis and actin patch assembly 1846511 8196918 PAS_chr1-4_0244 Pichia pastoris GS115 Epsin-like protein involved in endocytosis and actin patch assembly XP_002490360.1 1844997 R 644223 CDS PAS_chr1-4_0245 254566501 8196919 complement(1846957..1848300) 1 NC_012963.1 Component of the core form of RNA polymerase transcription factor TFIIH 1848300 8196919 PAS_chr1-4_0245 Pichia pastoris GS115 Component of the core form of RNA polymerase transcription factor TFIIH XP_002490361.1 1846957 R 644223 CDS PAS_chr1-4_0246 254566503 8196920 complement(1848478..1850166) 1 NC_012963.1 Divalent metal ion transporter involved in manganese homeostasis 1850166 8196920 PAS_chr1-4_0246 Pichia pastoris GS115 Divalent metal ion transporter involved in manganese homeostasis XP_002490362.1 1848478 R 644223 CDS PAS_chr1-4_0247 254566505 8196921 1850446..1851546 1 NC_012963.1 Dihydrouridine synthase, member of a family of dihydrouridine synthases 1851546 8196921 PAS_chr1-4_0247 Pichia pastoris GS115 Dihydrouridine synthase, member of a family of dihydrouridine synthases XP_002490363.1 1850446 D 644223 CDS PAS_chr1-4_0248 254566507 8196922 complement(1851598..1852248) 1 NC_012963.1 Essential protein of the mitochondrial inner membrane, component of the mitochondrial import system 1852248 8196922 PAS_chr1-4_0248 Pichia pastoris GS115 Essential protein of the mitochondrial inner membrane, component of the mitochondrial import system XP_002490364.1 1851598 R 644223 CDS PAS_chr1-4_0249 254566509 8196923 join(1853491..1855200,1855259..1860196) 1 NC_012963.1 Acetyl-CoA carboxylase, biotin containing enzyme 1860196 8196923 PAS_chr1-4_0249 Pichia pastoris GS115 Acetyl-CoA carboxylase, biotin containing enzyme XP_002490365.1 1853491 D 644223 CDS PAS_chr1-4_0251 254566511 8196924 1860448..1861782 1 NC_012963.1 hypothetical protein 1861782 8196924 PAS_chr1-4_0251 Pichia pastoris GS115 hypothetical protein XP_002490366.1 1860448 D 644223 CDS PAS_chr1-4_0252 254566513 8196925 complement(1862025..1863281) 1 NC_012963.1 hypothetical protein 1863281 8196925 PAS_chr1-4_0252 Pichia pastoris GS115 hypothetical protein XP_002490367.1 1862025 R 644223 CDS PAS_chr1-4_0253 254566515 8196926 complement(1863884..1865527) 1 NC_012963.1 ATP sulfurylase, catalyzes the primary step of intracellular sulfate activation 1865527 8196926 PAS_chr1-4_0253 Pichia pastoris GS115 ATP sulfurylase, catalyzes the primary step of intracellular sulfate activation XP_002490368.1 1863884 R 644223 CDS PAS_chr1-4_0254 254566517 8196927 complement(1865934..1867073) 1 NC_012963.1 Dihydrolipoamide dehydrogenase (E3)-binding protein (E3BP) 1867073 8196927 PAS_chr1-4_0254 Pichia pastoris GS115 Dihydrolipoamide dehydrogenase (E3)-binding protein (E3BP) XP_002490369.1 1865934 R 644223 CDS PAS_chr1-4_0255 254566519 8196928 complement(1867471..1869315) 1 NC_012963.1 hypothetical protein 1869315 8196928 PAS_chr1-4_0255 Pichia pastoris GS115 hypothetical protein XP_002490370.1 1867471 R 644223 CDS PAS_chr1-4_0256 254566521 8196929 1870160..1871386 1 NC_012963.1 hypothetical protein 1871386 8196929 PAS_chr1-4_0256 Pichia pastoris GS115 hypothetical protein XP_002490371.1 1870160 D 644223 CDS PAS_chr1-4_0257 254566523 8196930 complement(1871567..1872904) 1 NC_012963.1 Protein with similarity to mammalian monocarboxylate permeases 1872904 8196930 PAS_chr1-4_0257 Pichia pastoris GS115 Protein with similarity to mammalian monocarboxylate permeases XP_002490372.1 1871567 R 644223 CDS PAS_chr1-4_0258 254566525 8196931 complement(1873839..1874468) 1 NC_012963.1 hypothetical protein 1874468 8196931 PAS_chr1-4_0258 Pichia pastoris GS115 hypothetical protein XP_002490373.1 1873839 R 644223 CDS PAS_chr1-4_0260 254566527 8196932 1875576..1876478 1 NC_012963.1 hypothetical protein 1876478 8196932 PAS_chr1-4_0260 Pichia pastoris GS115 hypothetical protein XP_002490374.1 1875576 D 644223 CDS PAS_chr1-4_0261 254566529 8196933 complement(1876563..1877381) 1 NC_012963.1 hypothetical protein 1877381 8196933 PAS_chr1-4_0261 Pichia pastoris GS115 hypothetical protein XP_002490375.1 1876563 R 644223 CDS PAS_chr1-4_0262 254566531 8196934 join(1877743..1877830,1877890..1878806) 1 NC_012963.1 Alpha' catalytic subunit of casein kinase 2 1878806 8196934 PAS_chr1-4_0262 Pichia pastoris GS115 Alpha' catalytic subunit of casein kinase 2 XP_002490376.1 1877743 D 644223 CDS PAS_chr1-4_0263 254566533 8196935 1879138..1881162 1 NC_012963.1 Protein required for maturation of the 25S and 5.8S ribosomal RNAs 1881162 8196935 PAS_chr1-4_0263 Pichia pastoris GS115 Protein required for maturation of the 25S and 5.8S ribosomal RNAs XP_002490377.1 1879138 D 644223 CDS PAS_chr1-4_0664 254566535 8196936 1881445..1883904 1 NC_012963.1 hypothetical protein 1883904 8196936 PAS_chr1-4_0664 Pichia pastoris GS115 hypothetical protein XP_002490378.1 1881445 D 644223 CDS PAS_chr1-4_0264 254566537 8197873 complement(1883939..1885636) 1 NC_012963.1 Phosphoglucomutase 1885636 8197873 PAS_chr1-4_0264 Pichia pastoris GS115 Phosphoglucomutase XP_002490379.1 1883939 R 644223 CDS PAS_chr1-4_0265 254566539 8196937 complement(join(1887617..1888351,1888418..1888426)) 1 NC_012963.1 hypothetical protein 1888426 8196937 PAS_chr1-4_0265 Pichia pastoris GS115 hypothetical protein XP_002490380.1 1887617 R 644223 CDS PAS_chr1-4_0665 254566541 8196938 complement(1888535..1889290) 1 NC_012963.1 hypothetical protein 1889290 8196938 PAS_chr1-4_0665 Pichia pastoris GS115 hypothetical protein XP_002490381.1 1888535 R 644223 CDS PAS_chr1-4_0267 254566543 8197874 complement(1889585..1890157) 1 NC_012963.1 hypothetical protein 1890157 8197874 PAS_chr1-4_0267 Pichia pastoris GS115 hypothetical protein XP_002490382.1 1889585 R 644223 CDS PAS_chr1-4_0268 254566545 8196939 complement(1890268..1892133) 1 NC_012963.1 Golgi matrix protein involved in the structural organization of the cis-Golgi 1892133 8196939 PAS_chr1-4_0268 Pichia pastoris GS115 Golgi matrix protein involved in the structural organization of the cis-Golgi XP_002490383.1 1890268 R 644223 CDS PAS_chr1-4_0269 254566547 8196940 join(1892663..1892719,1892769..1895438) 1 NC_012963.1 Replication factor C subunit 1895438 8196940 PAS_chr1-4_0269 Pichia pastoris GS115 Replication factor C subunit XP_002490384.1 1892663 D 644223 CDS PAS_chr1-4_0270 254566549 8196941 complement(1895555..1895896) 1 NC_012963.1 hypothetical protein 1895896 8196941 PAS_chr1-4_0270 Pichia pastoris GS115 hypothetical protein XP_002490385.1 1895555 R 644223 CDS PAS_chr1-4_0271 254566551 8196942 1896033..1897340 1 NC_012963.1 Mitogen-activated kinase kinase involved in protein kinase C signaling pathway 1897340 8196942 PAS_chr1-4_0271 Pichia pastoris GS115 Mitogen-activated kinase kinase involved in protein kinase C signaling pathway XP_002490386.1 1896033 D 644223 CDS PAS_chr1-4_0272 254566553 8196943 join(1897524..1898214,1898690..1898886) 1 NC_012963.1 GrpE protein homolog, mitochondrial 1898886 8196943 PAS_chr1-4_0272 Pichia pastoris GS115 GrpE protein homolog, mitochondrial XP_002490387.1 1897524 D 644223 CDS PAS_chr1-4_0273 254566555 8196944 1899031..1901295 1 NC_012963.1 Serine/threonine protein kinase 1901295 8196944 PAS_chr1-4_0273 Pichia pastoris GS115 Serine/threonine protein kinase XP_002490388.1 1899031 D 644223 CDS PAS_chr1-4_0274 254566557 8196945 complement(1901340..1901792) 1 NC_012963.1 hypothetical protein 1901792 8196945 PAS_chr1-4_0274 Pichia pastoris GS115 hypothetical protein XP_002490389.1 1901340 R 644223 CDS PAS_chr1-4_0275 254566559 8196946 complement(join(1902019..1902323,1902668..1902686)) 1 NC_012963.1 N-terminally acetylated ribosomal protein L37 of the large (60S) ribosomal subunit 1902686 8196946 PAS_chr1-4_0275 Pichia pastoris GS115 N-terminally acetylated ribosomal protein L37 of the large (60S) ribosomal subunit XP_002490390.1 1902019 R 644223 CDS PAS_chr1-4_0697 254566561 8196947 complement(1902920..1903534) 1 NC_012963.1 hypothetical protein 1903534 8196947 PAS_chr1-4_0697 Pichia pastoris GS115 hypothetical protein XP_002490391.1 1902920 R 644223 CDS PAS_chr1-4_0276 254566563 8197441 complement(1903601..1905142) 1 NC_012963.1 WD-repeat protein involved in ribosome biogenesis 1905142 8197441 PAS_chr1-4_0276 Pichia pastoris GS115 WD-repeat protein involved in ribosome biogenesis XP_002490392.1 1903601 R 644223 CDS PAS_chr1-4_0277 254566565 8196948 1905807..1906952 1 NC_012963.1 Nuclear protein that binds to and stabilizes the exoribonuclease Rat1p 1906952 8196948 PAS_chr1-4_0277 Pichia pastoris GS115 Nuclear protein that binds to and stabilizes the exoribonuclease Rat1p XP_002490393.1 1905807 D 644223 CDS PAS_chr1-4_0278 254566567 8196949 1907115..1908374 1 NC_012963.1 Member of the oxysterol binding protein family, which includes seven yeast homologs 1908374 8196949 PAS_chr1-4_0278 Pichia pastoris GS115 Member of the oxysterol binding protein family, which includes seven yeast homologs XP_002490394.1 1907115 D 644223 CDS PAS_chr1-4_0279 254566569 8196950 complement(1908400..1912917) 1 NC_012963.1 MAP kinase kinase kinase of the HOG1 mitogen-activated signaling pathway 1912917 8196950 PAS_chr1-4_0279 Pichia pastoris GS115 MAP kinase kinase kinase of the HOG1 mitogen-activated signaling pathway XP_002490395.1 1908400 R 644223 CDS PAS_chr1-4_0280 254566571 8196951 1913151..1914224 1 NC_012963.1 Putative serine/threonine protein phosphatase, required for glycogen accumulation 1914224 8196951 PAS_chr1-4_0280 Pichia pastoris GS115 Putative serine/threonine protein phosphatase, required for glycogen accumulation XP_002490396.1 1913151 D 644223 CDS PAS_chr1-4_0698 254566573 8196952 1914733..1916409 1 NC_012963.1 hypothetical protein 1916409 8196952 PAS_chr1-4_0698 Pichia pastoris GS115 hypothetical protein XP_002490397.1 1914733 D 644223 CDS PAS_chr1-4_0281 254566575 8197442 complement(1916484..1918829) 1 NC_012963.1 Telobox-containing general regulatory factor 1918829 8197442 PAS_chr1-4_0281 Pichia pastoris GS115 Telobox-containing general regulatory factor XP_002490398.1 1916484 R 644223 CDS PAS_chr1-4_0282 254566577 8196953 join(1919077..1919180,1919427..1919919) 1 NC_012963.1 Histone H1, a linker histone required for nucleosome packaging at restricted sites 1919919 8196953 PAS_chr1-4_0282 Pichia pastoris GS115 Histone H1, a linker histone required for nucleosome packaging at restricted sites XP_002490399.1 1919077 D 644223 CDS PAS_chr1-4_0283 254566579 8196954 1920255..1921277 1 NC_012963.1 Poly(A) binding protein, part of the 3'-end RNA-processing complex 1921277 8196954 PAS_chr1-4_0283 Pichia pastoris GS115 Poly(A) binding protein, part of the 3'-end RNA-processing complex XP_002490400.1 1920255 D 644223 CDS PAS_chr1-4_0284 254566581 8196955 complement(1921398..1922147) 1 NC_012963.1 Protein involved in iron metabolism in mitochondria 1922147 8196955 PAS_chr1-4_0284 Pichia pastoris GS115 Protein involved in iron metabolism in mitochondria XP_002490401.1 1921398 R 644223 CDS PAS_chr1-4_0699 254566583 8196956 1922460..1923431 1 NC_012963.1 hypothetical protein 1923431 8196956 PAS_chr1-4_0699 Pichia pastoris GS115 hypothetical protein XP_002490402.1 1922460 D 644223 CDS PAS_chr1-4_0285 254566585 8197443 1923601..1928451 1 NC_012963.1 Nucleolar protein required for the normal accumulation of 25S and 5.8S rRNA 1928451 8197443 PAS_chr1-4_0285 Pichia pastoris GS115 Nucleolar protein required for the normal accumulation of 25S and 5.8S rRNA XP_002490403.1 1923601 D 644223 CDS PAS_chr1-4_0286 254566587 8196957 complement(1928596..1929963) 1 NC_012963.1 Forkhead transcription factor 1929963 8196957 PAS_chr1-4_0286 Pichia pastoris GS115 Forkhead transcription factor XP_002490404.1 1928596 R 644223 CDS PAS_chr1-4_0287 254566589 8196958 complement(1930483..1932651) 1 NC_012963.1 Histone methyltransferase 1932651 8196958 PAS_chr1-4_0287 Pichia pastoris GS115 Histone methyltransferase XP_002490405.1 1930483 R 644223 CDS PAS_chr1-4_0666 254566591 8196959 complement(1932902..1935736) 1 NC_012963.1 hypothetical protein 1935736 8196959 PAS_chr1-4_0666 Pichia pastoris GS115 hypothetical protein XP_002490406.1 1932902 R 644223 CDS PAS_chr1-4_0288 254566593 8197875 1936179..1938584 1 NC_012963.1 hypothetical protein 1938584 8197875 PAS_chr1-4_0288 Pichia pastoris GS115 hypothetical protein XP_002490407.1 1936179 D 644223 CDS PAS_chr1-4_0289 254566595 8197659 complement(1938665..1939624) 1 NC_012963.1 hypothetical protein 1939624 8197659 PAS_chr1-4_0289 Pichia pastoris GS115 hypothetical protein XP_002490408.1 1938665 R 644223 CDS PAS_chr1-4_0290 254566597 8197740 complement(1939845..1940960) 1 NC_012963.1 hypothetical protein 1940960 8197740 PAS_chr1-4_0290 Pichia pastoris GS115 hypothetical protein XP_002490409.1 1939845 R 644223 CDS PAS_chr1-4_0291 254566599 8197741 complement(join(1941941..1942062,1942142..1942196)) 1 NC_012963.1 hypothetical protein 1942196 8197741 PAS_chr1-4_0291 Pichia pastoris GS115 hypothetical protein XP_002490410.1 1941941 R 644223 CDS PAS_chr1-4_0292 254566601 8197742 1943024..1944274 1 NC_012963.1 3-phosphoglycerate kinase 1944274 8197742 PAS_chr1-4_0292 Pichia pastoris GS115 3-phosphoglycerate kinase XP_002490411.1 1943024 D 644223 CDS PAS_chr1-4_0293 254566603 8197743 1944625..1945692 1 NC_012963.1 Inositol polyphosphate multikinase (IPMK) 1945692 8197743 PAS_chr1-4_0293 Pichia pastoris GS115 Inositol polyphosphate multikinase (IPMK) XP_002490412.1 1944625 D 644223 CDS PAS_chr1-4_0294 254566605 8197744 1945868..1946728 1 NC_012963.1 Plasma membrane t-SNARE involved in fusion of secretory vesicles at the plasma membrane 1946728 8197744 PAS_chr1-4_0294 Pichia pastoris GS115 Plasma membrane t-SNARE involved in fusion of secretory vesicles at the plasma membrane XP_002490413.1 1945868 D 644223 CDS PAS_chr1-4_0295 254566607 8197745 1947401..1953040 1 NC_012963.1 Alpha subunit of fatty acid synthetase 1953040 8197745 PAS_chr1-4_0295 Pichia pastoris GS115 Alpha subunit of fatty acid synthetase XP_002490414.1 1947401 D 644223 CDS PAS_chr1-4_0296 254566609 8197746 complement(1953263..1954582) 1 NC_012963.1 Protein that binds Sin3p in a two-hybrid assay 1954582 8197746 PAS_chr1-4_0296 Pichia pastoris GS115 Protein that binds Sin3p in a two-hybrid assay XP_002490415.1 1953263 R 644223 CDS PAS_chr1-4_0297 254566611 8197747 complement(join(1955192..1956016,1956078..1956092)) 1 NC_012963.1 Suppressor protein STM1 1956092 8197747 PAS_chr1-4_0297 Pichia pastoris GS115 Suppressor protein STM1 XP_002490416.1 1955192 R 644223 CDS PAS_chr1-4_0667 254566613 8197748 complement(1956310..1961628) 1 NC_012963.1 hypothetical protein 1961628 8197748 PAS_chr1-4_0667 Pichia pastoris GS115 hypothetical protein XP_002490417.1 1956310 R 644223 CDS PAS_chr1-4_0668 254566615 8197876 complement(1962130..1963482) 1 NC_012963.1 hypothetical protein 1963482 8197876 PAS_chr1-4_0668 Pichia pastoris GS115 hypothetical protein XP_002490418.1 1962130 R 644223 CDS PAS_chr1-4_0298 254566617 8197877 1964283..1965449 1 NC_012963.1 Mitochondrially localized type 2C protein phosphatase 1965449 8197877 PAS_chr1-4_0298 Pichia pastoris GS115 Mitochondrially localized type 2C protein phosphatase XP_002490419.1 1964283 D 644223 CDS PAS_chr1-4_0299 254566619 8197749 complement(1965537..1967246) 1 NC_012963.1 Mitochondrial external NADH dehydrogenase, a type II NAD(P)H:quinone oxidoreductase 1967246 8197749 PAS_chr1-4_0299 Pichia pastoris GS115 Mitochondrial external NADH dehydrogenase, a type II NAD(P)H:quinone oxidoreductase XP_002490420.1 1965537 R 644223 CDS PAS_chr1-4_0300 254566621 8197750 complement(1968112..1969137) 1 NC_012963.1 hypothetical protein 1969137 8197750 PAS_chr1-4_0300 Pichia pastoris GS115 hypothetical protein XP_002490421.1 1968112 R 644223 CDS PAS_chr1-4_0301 254566623 8197751 complement(1969283..1969888) 1 NC_012963.1 hypothetical protein 1969888 8197751 PAS_chr1-4_0301 Pichia pastoris GS115 hypothetical protein XP_002490422.1 1969283 R 644223 CDS PAS_chr1-4_0302 254566625 8197752 1970208..1971398 1 NC_012963.1 Calmodulin-dependent protein kinase 1971398 8197752 PAS_chr1-4_0302 Pichia pastoris GS115 Calmodulin-dependent protein kinase XP_002490423.1 1970208 D 644223 CDS PAS_chr1-4_0303 254566627 8197753 1971897..1972931 1 NC_012963.1 Phorphobilinogen deaminase 1972931 8197753 PAS_chr1-4_0303 Pichia pastoris GS115 Phorphobilinogen deaminase XP_002490424.1 1971897 D 644223 CDS PAS_chr1-4_0669 254566629 8197754 1973114..1973683 1 NC_012963.1 hypothetical protein 1973683 8197754 PAS_chr1-4_0669 Pichia pastoris GS115 hypothetical protein XP_002490425.1 1973114 D 644223 CDS PAS_chr1-4_0304 254566631 8197878 1973896..1975104 1 NC_012963.1 Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase), cytosolic enzyme 1975104 8197878 PAS_chr1-4_0304 Pichia pastoris GS115 Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase), cytosolic enzyme XP_002490426.1 1973896 D 644223 CDS PAS_chr1-4_0305 254566633 8197755 complement(1975218..1976441) 1 NC_012963.1 Cyclin-dependent protein kinase, component of RNA polymerase II holoenzyme 1976441 8197755 PAS_chr1-4_0305 Pichia pastoris GS115 Cyclin-dependent protein kinase, component of RNA polymerase II holoenzyme XP_002490427.1 1975218 R 644223 CDS PAS_chr1-4_0306 254566635 8197756 complement(1976650..1977330) 1 NC_012963.1 hypothetical protein 1977330 8197756 PAS_chr1-4_0306 Pichia pastoris GS115 hypothetical protein XP_002490428.1 1976650 R 644223 CDS PAS_chr1-4_0307 254566637 8197757 1977914..1978651 1 NC_012963.1 hypothetical protein 1978651 8197757 PAS_chr1-4_0307 Pichia pastoris GS115 hypothetical protein XP_002490429.1 1977914 D 644223 CDS PAS_chr1-4_0308 254566639 8197758 complement(1978688..1980469) 1 NC_012963.1 Golgi membrane protein with similarity to mammalian CASP 1980469 8197758 PAS_chr1-4_0308 Pichia pastoris GS115 Golgi membrane protein with similarity to mammalian CASP XP_002490430.1 1978688 R 644223 CDS PAS_chr1-4_0309 254566641 8197759 complement(1980656..1983070) 1 NC_012963.1 Subunit of the SWI/SNF chromatin remodeling complex 1983070 8197759 PAS_chr1-4_0309 Pichia pastoris GS115 Subunit of the SWI/SNF chromatin remodeling complex XP_002490431.1 1980656 R 644223 CDS PAS_chr1-4_0310 254566643 8197760 1983652..1985616 1 NC_012963.1 Autophagy-related protein 1985616 8197760 PAS_chr1-4_0310 Pichia pastoris GS115 Autophagy-related protein XP_002490432.1 1983652 D 644223 CDS PAS_chr1-4_0311 254566645 8197761 complement(1985666..1987807) 1 NC_012963.1 Highly conserved nuclear protein required for actin cytoskeleton organization 1987807 8197761 PAS_chr1-4_0311 Pichia pastoris GS115 Highly conserved nuclear protein required for actin cytoskeleton organization XP_002490433.1 1985666 R 644223 CDS PAS_chr1-4_0312 254566647 8197762 complement(1987995..1990190) 1 NC_012963.1 hypothetical protein 1990190 8197762 PAS_chr1-4_0312 Pichia pastoris GS115 hypothetical protein XP_002490434.1 1987995 R 644223 CDS PAS_chr1-4_0313 254566649 8197763 1990609..1990890 1 NC_012963.1 Subunit 8 of ubiquinol cytochrome-c reductase complex 1990890 8197763 PAS_chr1-4_0313 Pichia pastoris GS115 Subunit 8 of ubiquinol cytochrome-c reductase complex XP_002490435.1 1990609 D 644223 CDS PAS_chr1-4_0314 254566651 8197764 complement(1991021..1992085) 1 NC_012963.1 Farnesyl pyrophosphate synthetase 1992085 8197764 PAS_chr1-4_0314 Pichia pastoris GS115 Farnesyl pyrophosphate synthetase XP_002490436.1 1991021 R 644223 CDS PAS_chr1-4_0315 254566653 8197765 complement(1992440..1993498) 1 NC_012963.1 Member of silencing information regulator 2 (Sir2) family of NAD(+)-dependent protein deacetylases 1993498 8197765 PAS_chr1-4_0315 Pichia pastoris GS115 Member of silencing information regulator 2 (Sir2) family of NAD(+)-dependent protein deacetylases XP_002490437.1 1992440 R 644223 CDS PAS_chr1-4_0316 254566655 8197766 join(1993854..1993859,1993944..1996961) 1 NC_012963.1 hypothetical protein 1996961 8197766 PAS_chr1-4_0316 Pichia pastoris GS115 hypothetical protein XP_002490438.1 1993854 D 644223 CDS PAS_chr1-4_0317 254566657 8197767 complement(1997041..1997613) 1 NC_012963.1 Zeta subunit of the coatomer complex (COPI), which coats Golgi-derived transport vesicles 1997613 8197767 PAS_chr1-4_0317 Pichia pastoris GS115 Zeta subunit of the coatomer complex (COPI), which coats Golgi-derived transport vesicles XP_002490439.1 1997041 R 644223 CDS PAS_chr1-4_0318 254566659 8197768 join(1997860..1997910,1997963..1998856) 1 NC_012963.1 Transcription initiation factor TFIID subunit 3 1998856 8197768 PAS_chr1-4_0318 Pichia pastoris GS115 Transcription initiation factor TFIID subunit 3 XP_002490440.1 1997860 D 644223 CDS PAS_chr1-4_0319 254566661 8197769 complement(1998904..2002518) 1 NC_012963.1 Protein required for export of the ribosomal subunits 2002518 8197769 PAS_chr1-4_0319 Pichia pastoris GS115 Protein required for export of the ribosomal subunits XP_002490441.1 1998904 R 644223 CDS PAS_chr1-4_0320 254566663 8197770 2002759..2003121 1 NC_012963.1 Mitochondrial ribosomal protein of the small subunit 2003121 8197770 PAS_chr1-4_0320 Pichia pastoris GS115 Mitochondrial ribosomal protein of the small subunit XP_002490442.1 2002759 D 644223 CDS PAS_chr1-4_0321 254566665 8197771 2003552..2004928 1 NC_012963.1 hypothetical protein 2004928 8197771 PAS_chr1-4_0321 Pichia pastoris GS115 hypothetical protein XP_002490443.1 2003552 D 644223 CDS PAS_chr1-4_0322 254566667 8197772 2005245..2006903 1 NC_012963.1 Activator of multidrug resistance genes, forms a heterodimer with Pdr1p 2006903 8197772 PAS_chr1-4_0322 Pichia pastoris GS115 Activator of multidrug resistance genes, forms a heterodimer with Pdr1p XP_002490444.1 2005245 D 644223 CDS PAS_chr1-4_0323 254566669 8197773 complement(2006911..2007726) 1 NC_012963.1 tRNAHis guanylyltransferase 2007726 8197773 PAS_chr1-4_0323 Pichia pastoris GS115 tRNAHis guanylyltransferase XP_002490445.1 2006911 R 644223 CDS PAS_chr1-4_0324 254566671 8197774 2007927..2011424 1 NC_012963.1 RNA polymerase I subunit A135 2011424 8197774 PAS_chr1-4_0324 Pichia pastoris GS115 RNA polymerase I subunit A135 XP_002490446.1 2007927 D 644223 CDS PAS_chr1-4_0325 254566673 8197775 2011685..2014459 1 NC_012963.1 High affinity Ca2+/Mn2+ P-type ATPase required for Ca2+ and Mn2+ transport into Golgi 2014459 8197775 PAS_chr1-4_0325 Pichia pastoris GS115 High affinity Ca2+/Mn2+ P-type ATPase required for Ca2+ and Mn2+ transport into Golgi XP_002490447.1 2011685 D 644223 CDS PAS_chr1-4_0326 254566675 8197776 complement(2014473..2015606) 1 NC_012963.1 Protein required for respiratory growth 2015606 8197776 PAS_chr1-4_0326 Pichia pastoris GS115 Protein required for respiratory growth XP_002490448.1 2014473 R 644223 CDS PAS_chr1-4_0327 254566677 8197777 2016715..2017038 1 NC_012963.1 hypothetical protein 2017038 8197777 PAS_chr1-4_0327 Pichia pastoris GS115 hypothetical protein XP_002490449.1 2016715 D 644223 CDS PAS_chr1-4_0670 254566679 8197778 complement(2017195..2017737) 1 NC_012963.1 hypothetical protein 2017737 8197778 PAS_chr1-4_0670 Pichia pastoris GS115 hypothetical protein XP_002490450.1 2017195 R 644223 CDS PAS_chr1-4_0328 254566681 8197879 complement(2017841..2018950) 1 NC_012963.1 Ribosomal RNA-processing protein 8 2018950 8197879 PAS_chr1-4_0328 Pichia pastoris GS115 Ribosomal RNA-processing protein 8 XP_002490451.1 2017841 R 644223 CDS PAS_chr1-4_0671 254566683 8197779 complement(2019008..2020513) 1 NC_012963.1 hypothetical protein 2020513 8197779 PAS_chr1-4_0671 Pichia pastoris GS115 hypothetical protein XP_002490452.1 2019008 R 644223 CDS PAS_chr1-4_0329 254566685 8197880 2021033..2021461 1 NC_012963.1 hypothetical protein 2021461 8197880 PAS_chr1-4_0329 Pichia pastoris GS115 hypothetical protein XP_002490453.1 2021033 D 644223 CDS PAS_chr1-4_0330 254566687 8197780 complement(2021468..2022205) 1 NC_012963.1 hypothetical protein 2022205 8197780 PAS_chr1-4_0330 Pichia pastoris GS115 hypothetical protein XP_002490454.1 2021468 R 644223 CDS PAS_chr1-4_0331 254566689 8197781 2022815..2023549 1 NC_012963.1 hypothetical protein 2023549 8197781 PAS_chr1-4_0331 Pichia pastoris GS115 hypothetical protein XP_002490455.1 2022815 D 644223 CDS PAS_chr1-4_0332 254566691 8197782 complement(2023565..2024356) 1 NC_012963.1 hypothetical protein 2024356 8197782 PAS_chr1-4_0332 Pichia pastoris GS115 hypothetical protein XP_002490456.1 2023565 R 644223 CDS PAS_chr1-4_0333 254566693 8197783 2024691..2025890 1 NC_012963.1 hypothetical protein 2025890 8197783 PAS_chr1-4_0333 Pichia pastoris GS115 hypothetical protein XP_002490457.1 2024691 D 644223 CDS PAS_chr1-4_0334 254566695 8197784 complement(2025899..2028196) 1 NC_012963.1 Essential 100kDa subunit of the exocyst complex 2028196 8197784 PAS_chr1-4_0334 Pichia pastoris GS115 Essential 100kDa subunit of the exocyst complex XP_002490458.1 2025899 R 644223 CDS PAS_chr1-4_0335 254566697 8197785 2028533..2029132 1 NC_012963.1 Conserved nuclear RNA-binding protein 2029132 8197785 PAS_chr1-4_0335 Pichia pastoris GS115 Conserved nuclear RNA-binding protein XP_002490459.1 2028533 D 644223 CDS PAS_chr1-4_0336 254566699 8197786 complement(2029163..2030962) 1 NC_012963.1 Transcriptional activator 2030962 8197786 PAS_chr1-4_0336 Pichia pastoris GS115 Transcriptional activator XP_002490460.1 2029163 R 644223 CDS PAS_chr1-4_0338 254566701 8197787 2031599..2033248 1 NC_012963.1 Isocitrate lyase, catalyzes the formation of succinate and glyoxylate from isocitrate 2033248 8197787 PAS_chr1-4_0338 Pichia pastoris GS115 Isocitrate lyase, catalyzes the formation of succinate and glyoxylate from isocitrate XP_002490461.1 2031599 D 644223 CDS PAS_chr1-4_0339 254566703 8197788 complement(2033480..2034271) 1 NC_012963.1 Transcriptional activator 2034271 8197788 PAS_chr1-4_0339 Pichia pastoris GS115 Transcriptional activator XP_002490462.1 2033480 R 644223 CDS PAS_chr1-4_0672 254566705 8197789 complement(2035252..2035656) 1 NC_012963.1 hypothetical protein 2035656 8197789 PAS_chr1-4_0672 Pichia pastoris GS115 hypothetical protein XP_002490463.1 2035252 R 644223 CDS PAS_chr1-4_0340 254566707 8197881 2035972..2036784 1 NC_012963.1 ADP-ribosylation factor (ARF) GTPase activating protein (GAP) effector 2036784 8197881 PAS_chr1-4_0340 Pichia pastoris GS115 ADP-ribosylation factor (ARF) GTPase activating protein (GAP) effector XP_002490464.1 2035972 D 644223 CDS PAS_chr1-4_0341 254566709 8197790 join(2037157..2037613,2037673..2038724) 1 NC_012963.1 Ubiquitin-specific protease 2038724 8197790 PAS_chr1-4_0341 Pichia pastoris GS115 Ubiquitin-specific protease XP_002490465.1 2037157 D 644223 CDS PAS_chr1-4_0342 254566711 8197791 complement(2038803..2039567) 1 NC_012963.1 Essential protein with similarity to phosducins, which are G-protein regulators 2039567 8197791 PAS_chr1-4_0342 Pichia pastoris GS115 Essential protein with similarity to phosducins, which are G-protein regulators XP_002490466.1 2038803 R 644223 CDS PAS_chr1-4_0343 254566713 8197792 2039716..2041431 1 NC_012963.1 Essential protein 2041431 8197792 PAS_chr1-4_0343 Pichia pastoris GS115 Essential protein XP_002490467.1 2039716 D 644223 CDS PAS_chr1-4_0344 254566715 8197793 complement(2041444..2043573) 1 NC_012963.1 hypothetical protein 2043573 8197793 PAS_chr1-4_0344 Pichia pastoris GS115 hypothetical protein XP_002490468.1 2041444 R 644223 CDS PAS_chr1-4_0346 254566717 8197794 complement(join(2044765..2045322,2045408..2047015)) 1 NC_012963.1 hypothetical protein 2047015 8197794 PAS_chr1-4_0346 Pichia pastoris GS115 hypothetical protein XP_002490469.1 2044765 R 644223 CDS PAS_chr1-4_0347 254566719 8197795 2047593..2049668 1 NC_012963.1 Putative metalloprotease 2049668 8197795 PAS_chr1-4_0347 Pichia pastoris GS115 Putative metalloprotease XP_002490470.1 2047593 D 644223 CDS PAS_chr1-4_0348 254566721 8197796 complement(2050818..2053691) 1 NC_012963.1 hypothetical protein 2053691 8197796 PAS_chr1-4_0348 Pichia pastoris GS115 hypothetical protein XP_002490471.1 2050818 R 644223 CDS PAS_chr1-4_0349 254566723 8197797 complement(2053878..2056019) 1 NC_012963.1 Peroxisomal biogenesis factor 8 2056019 8197797 PAS_chr1-4_0349 Pichia pastoris GS115 Peroxisomal biogenesis factor 8 XP_002490472.1 2053878 R 644223 CDS PAS_chr1-4_0350 254566725 8197798 2056275..2057105 1 NC_012963.1 hypothetical protein 2057105 8197798 PAS_chr1-4_0350 Pichia pastoris GS115 hypothetical protein XP_002490473.1 2056275 D 644223 CDS PAS_chr1-4_0351 254566727 8197799 complement(join(2057159..2057711,2057786..2057799)) 1 NC_012963.1 hypothetical protein 2057799 8197799 PAS_chr1-4_0351 Pichia pastoris GS115 hypothetical protein XP_002490474.1 2057159 R 644223 CDS PAS_chr1-4_0352 254566729 8197800 join(2058093..2058204,2058432..2058880) 1 NC_012963.1 Protein component of the large (60S) ribosomal subunit 2058880 8197800 PAS_chr1-4_0352 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit XP_002490475.1 2058093 D 644223 CDS PAS_chr1-4_0353 254566731 8197801 2059632..2060084 1 NC_012963.1 Protein component of the small (40S) ribosomal subunit 2060084 8197801 PAS_chr1-4_0353 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002490476.1 2059632 D 644223 CDS PAS_chr1-4_0354 254566733 8197802 complement(2060125..2061441) 1 NC_012963.1 Catalytic subunit of an adoMet-dependent tRNA methyltransferase complex (Trm11p-Trm112p) 2061441 8197802 PAS_chr1-4_0354 Pichia pastoris GS115 Catalytic subunit of an adoMet-dependent tRNA methyltransferase complex (Trm11p-Trm112p) XP_002490477.1 2060125 R 644223 CDS PAS_chr1-4_0355 254566735 8197803 2061676..2063064 1 NC_012963.1 Subunit of cleavage factor I 2063064 8197803 PAS_chr1-4_0355 Pichia pastoris GS115 Subunit of cleavage factor I XP_002490478.1 2061676 D 644223 CDS PAS_chr1-4_0673 254566737 8197804 2063188..2063982 1 NC_012963.1 hypothetical protein 2063982 8197804 PAS_chr1-4_0673 Pichia pastoris GS115 hypothetical protein XP_002490479.1 2063188 D 644223 CDS PAS_chr1-4_0356 254566739 8197882 2064110..2067121 1 NC_012963.1 Putative ATP-dependent RNA helicase of the DEAD-box protein family 2067121 8197882 PAS_chr1-4_0356 Pichia pastoris GS115 Putative ATP-dependent RNA helicase of the DEAD-box protein family XP_002490480.1 2064110 D 644223 CDS PAS_chr1-4_0357 254566741 8197805 2067355..2068686 1 NC_012963.1 cAMP-dependent protein kinase catalytic subunit 2068686 8197805 PAS_chr1-4_0357 Pichia pastoris GS115 cAMP-dependent protein kinase catalytic subunit XP_002490481.1 2067355 D 644223 CDS PAS_chr1-4_0358 254566743 8197806 complement(2068933..2069415) 1 NC_012963.1 Protein associated with the mitochondrial nucleoid 2069415 8197806 PAS_chr1-4_0358 Pichia pastoris GS115 Protein associated with the mitochondrial nucleoid XP_002490482.1 2068933 R 644223 CDS PAS_chr1-4_0359 254566745 8197807 2069838..2070179 1 NC_012963.1 RNA polymerase II subunit B12.6 2070179 8197807 PAS_chr1-4_0359 Pichia pastoris GS115 RNA polymerase II subunit B12.6 XP_002490483.1 2069838 D 644223 CDS PAS_chr1-4_0360 254566747 8197808 2070609..2073389 1 NC_012963.1 Protein involved in DNA replication 2073389 8197808 PAS_chr1-4_0360 Pichia pastoris GS115 Protein involved in DNA replication XP_002490484.1 2070609 D 644223 CDS PAS_chr1-4_0361 254566749 8197809 complement(2073479..2074570) 1 NC_012963.1 hypothetical protein 2074570 8197809 PAS_chr1-4_0361 Pichia pastoris GS115 hypothetical protein XP_002490485.1 2073479 R 644223 CDS PAS_chr1-4_0362 254566751 8197810 complement(2075374..2077317) 1 NC_012963.1 Putative metalloprotease 2077317 8197810 PAS_chr1-4_0362 Pichia pastoris GS115 Putative metalloprotease XP_002490486.1 2075374 R 644223 CDS PAS_chr1-4_0363 254566753 8197811 complement(2077831..2078745) 1 NC_012963.1 Cyclin-dependent kinase-activating kinase required for passage through the cell cycle 2078745 8197811 PAS_chr1-4_0363 Pichia pastoris GS115 Cyclin-dependent kinase-activating kinase required for passage through the cell cycle XP_002490487.1 2077831 R 644223 CDS PAS_chr1-4_0364 254566755 8197812 2078887..2080179 1 NC_012963.1 Rab GTPase-activating protein 2080179 8197812 PAS_chr1-4_0364 Pichia pastoris GS115 Rab GTPase-activating protein XP_002490488.1 2078887 D 644223 CDS PAS_chr1-4_0365 254566757 8197813 complement(2080197..2081750) 1 NC_012963.1 Subunit of the SAGA transcriptional regulatory complex but not present in SAGA-like complex SLIK/SAL 2081750 8197813 PAS_chr1-4_0365 Pichia pastoris GS115 Subunit of the SAGA transcriptional regulatory complex but not present in SAGA-like complex SLIK/SAL XP_002490489.1 2080197 R 644223 CDS PAS_chr1-4_0366 254566759 8197814 2081950..2082882 1 NC_012963.1 Part of the evolutionarily-conserved CCR4-NOT transcriptional regulatory complex 2082882 8197814 PAS_chr1-4_0366 Pichia pastoris GS115 Part of the evolutionarily-conserved CCR4-NOT transcriptional regulatory complex XP_002490490.1 2081950 D 644223 CDS PAS_chr1-4_0367 254566761 8197815 2083203..2084357 1 NC_012963.1 C-5 sterol desaturase, catalyzes the introduction of a C-5(6) double bond into episterol 2084357 8197815 PAS_chr1-4_0367 Pichia pastoris GS115 C-5 sterol desaturase, catalyzes the introduction of a C-5(6) double bond into episterol XP_002490491.1 2083203 D 644223 CDS PAS_chr1-4_0368 254566763 8197816 complement(2084592..2085779) 1 NC_012963.1 Protein kinase required for signal transduction during entry into meiosis 2085779 8197816 PAS_chr1-4_0368 Pichia pastoris GS115 Protein kinase required for signal transduction during entry into meiosis XP_002490492.1 2084592 R 644223 CDS PAS_chr1-4_0369 254566765 8197817 2086945..2087118 1 NC_012963.1 hypothetical protein 2087118 8197817 PAS_chr1-4_0369 Pichia pastoris GS115 hypothetical protein XP_002490493.1 2086945 D 644223 CDS PAS_chr1-4_0370 254566767 8196960 2087289..2087756 1 NC_012963.1 hypothetical protein 2087756 8196960 PAS_chr1-4_0370 Pichia pastoris GS115 hypothetical protein XP_002490494.1 2087289 D 644223 CDS PAS_chr1-4_0674 254566769 8196961 complement(join(2087778..2088011,2088063..2088089)) 1 NC_012963.1 hypothetical protein 2088089 8196961 PAS_chr1-4_0674 Pichia pastoris GS115 hypothetical protein XP_002490495.1 2087778 R 644223 CDS PAS_chr1-4_0371 254566771 8197883 2088310..2088714 1 NC_012963.1 hypothetical protein 2088714 8197883 PAS_chr1-4_0371 Pichia pastoris GS115 hypothetical protein XP_002490496.1 2088310 D 644223 CDS PAS_chr1-4_0652 254566773 8196962 complement(join(2088800..2090228,2090411..2091114)) 1 NC_012963.1 hypothetical protein 2091114 8196962 PAS_chr1-4_0652 Pichia pastoris GS115 hypothetical protein XP_002490497.1 2088800 R 644223 CDS PAS_chr1-4_0372 254566775 8197861 complement(2091389..2091856) 1 NC_012963.1 hypothetical protein 2091856 8197861 PAS_chr1-4_0372 Pichia pastoris GS115 hypothetical protein XP_002490498.1 2091389 R 644223 CDS PAS_chr1-4_0373 254566777 8196963 2092158..2093561 1 NC_012963.1 hypothetical protein 2093561 8196963 PAS_chr1-4_0373 Pichia pastoris GS115 hypothetical protein XP_002490499.1 2092158 D 644223 CDS PAS_chr1-4_0374 254566779 8196964 2093844..2094233 1 NC_012963.1 Subunit of an adoMet-dependent tRNA methyltransferase (MTase) complex (Trm11p-Trm112p) 2094233 8196964 PAS_chr1-4_0374 Pichia pastoris GS115 Subunit of an adoMet-dependent tRNA methyltransferase (MTase) complex (Trm11p-Trm112p) XP_002490500.1 2093844 D 644223 CDS PAS_chr1-4_0375 254566781 8196965 2094511..2096760 1 NC_012963.1 Putative protein kinase that, when overexpressed, interferes with pheromone-induced growth arrest 2096760 8196965 PAS_chr1-4_0375 Pichia pastoris GS115 Putative protein kinase that, when overexpressed, interferes with pheromone-induced growth arrest XP_002490501.1 2094511 D 644223 CDS PAS_chr1-4_0376 254566783 8196966 complement(2096785..2099799) 1 NC_012963.1 Mismatch repair protein 2099799 8196966 PAS_chr1-4_0376 Pichia pastoris GS115 Mismatch repair protein XP_002490502.1 2096785 R 644223 CDS PAS_chr1-4_0377 254566785 8196967 2100115..2100648 1 NC_012963.1 hypothetical protein 2100648 8196967 PAS_chr1-4_0377 Pichia pastoris GS115 hypothetical protein XP_002490503.1 2100115 D 644223 CDS PAS_chr1-4_0378 254566787 8196968 complement(2100720..2102852) 1 NC_012963.1 hypothetical protein 2102852 8196968 PAS_chr1-4_0378 Pichia pastoris GS115 hypothetical protein XP_002490504.1 2100720 R 644223 CDS PAS_chr1-4_0379 254566789 8196969 join(2103705..2103749,2103803..2104912) 1 NC_012963.1 Penta-EF-hand protein 2104912 8196969 PAS_chr1-4_0379 Pichia pastoris GS115 Penta-EF-hand protein XP_002490505.1 2103705 D 644223 CDS PAS_chr1-4_0380 254566791 8196970 2106044..2109091 1 NC_012963.1 Phosphatidylinositol 4-kinase 2109091 8196970 PAS_chr1-4_0380 Pichia pastoris GS115 Phosphatidylinositol 4-kinase XP_002490506.1 2106044 D 644223 CDS PAS_chr1-4_0381 254566793 8196971 2109364..2112384 1 NC_012963.1 ER membrane localized phosphoryltransferase that adds phosphoethanolamine 2112384 8196971 PAS_chr1-4_0381 Pichia pastoris GS115 ER membrane localized phosphoryltransferase that adds phosphoethanolamine XP_002490507.1 2109364 D 644223 CDS PAS_chr1-4_0382 254566795 8196972 complement(2112443..2113519) 1 NC_012963.1 hypothetical protein 2113519 8196972 PAS_chr1-4_0382 Pichia pastoris GS115 hypothetical protein XP_002490508.1 2112443 R 644223 CDS PAS_chr1-4_0383 254566797 8196973 complement(2113622..2117584) 1 NC_012963.1 hypothetical protein 2117584 8196973 PAS_chr1-4_0383 Pichia pastoris GS115 hypothetical protein XP_002490509.1 2113622 R 644223 CDS PAS_chr1-4_0384 254566799 8196974 complement(join(2117968..2118646,2118701..2118768,2118841..2118888)) 1 NC_012963.1 Amphiphysin-like lipid raft protein 2118888 8196974 PAS_chr1-4_0384 Pichia pastoris GS115 Amphiphysin-like lipid raft protein XP_002490510.1 2117968 R 644223 CDS PAS_chr1-4_0700 254566801 8196975 complement(2119093..2120721) 1 NC_012963.1 hypothetical protein 2120721 8196975 PAS_chr1-4_0700 Pichia pastoris GS115 hypothetical protein XP_002490511.1 2119093 R 644223 CDS PAS_chr1-4_0385 254566803 8197444 complement(join(2121077..2122699,2122737..2123447)) 1 NC_012963.1 Ser/Thr protein kinase involved in salt tolerance 2123447 8197444 PAS_chr1-4_0385 Pichia pastoris GS115 Ser/Thr protein kinase involved in salt tolerance XP_002490512.1 2121077 R 644223 CDS PAS_chr1-4_0388 254566805 8196976 2123556..2125088 1 NC_012963.1 hypothetical protein 2125088 8196976 PAS_chr1-4_0388 Pichia pastoris GS115 hypothetical protein XP_002490513.1 2123556 D 644223 CDS PAS_chr1-4_0389 254566807 8196977 complement(2125133..2127682) 1 NC_012963.1 hypothetical protein 2127682 8196977 PAS_chr1-4_0389 Pichia pastoris GS115 hypothetical protein XP_002490514.1 2125133 R 644223 CDS PAS_chr1-4_0390 254566809 8196978 2128029..2129747 1 NC_012963.1 Choline kinase, catalyzing the first step in phosphatidylcholine synthesis via the CDP-choline 2129747 8196978 PAS_chr1-4_0390 Pichia pastoris GS115 Choline kinase, catalyzing the first step in phosphatidylcholine synthesis via the CDP-choline XP_002490515.1 2128029 D 644223 CDS PAS_chr1-4_0391 254566811 8196979 complement(2129774..2132125) 1 NC_012963.1 Oligopeptide transporter 2132125 8196979 PAS_chr1-4_0391 Pichia pastoris GS115 Oligopeptide transporter XP_002490516.1 2129774 R 644223 CDS PAS_chr1-4_0392 254566813 8196980 complement(2132248..2132925) 1 NC_012963.1 hypothetical protein 2132925 8196980 PAS_chr1-4_0392 Pichia pastoris GS115 hypothetical protein XP_002490517.1 2132248 R 644223 CDS PAS_chr1-4_0393 254566815 8196981 2133204..2134094 1 NC_012963.1 Member of a stationary phase-induced gene family 2134094 8196981 PAS_chr1-4_0393 Pichia pastoris GS115 Member of a stationary phase-induced gene family XP_002490518.1 2133204 D 644223 CDS PAS_chr1-4_0675 254566817 8196982 2134828..2136228 1 NC_012963.1 hypothetical protein 2136228 8196982 PAS_chr1-4_0675 Pichia pastoris GS115 hypothetical protein XP_002490519.1 2134828 D 644223 CDS PAS_chr1-4_0394 254566819 8197884 complement(2136313..2137797) 1 NC_012963.1 Ammonium permease involved in regulation of pseudohyphal growth 2137797 8197884 PAS_chr1-4_0394 Pichia pastoris GS115 Ammonium permease involved in regulation of pseudohyphal growth XP_002490520.1 2136313 R 644223 CDS PAS_chr1-4_0395 254566821 8196983 2139069..2140082 1 NC_012963.1 Transcriptional activator of genes regulated by nitrogen catabolite repression (NCR) 2140082 8196983 PAS_chr1-4_0395 Pichia pastoris GS115 Transcriptional activator of genes regulated by nitrogen catabolite repression (NCR) XP_002490521.1 2139069 D 644223 CDS PAS_chr1-4_0396 254566823 8196984 2140228..2140941 1 NC_012963.1 hypothetical protein 2140941 8196984 PAS_chr1-4_0396 Pichia pastoris GS115 hypothetical protein XP_002490522.1 2140228 D 644223 CDS PAS_chr1-4_0676 254566825 8196985 complement(2141044..2141598) 1 NC_012963.1 hypothetical protein 2141598 8196985 PAS_chr1-4_0676 Pichia pastoris GS115 hypothetical protein XP_002490523.1 2141044 R 644223 CDS PAS_chr1-4_0397 254566827 8197885 complement(2141693..2142775) 1 NC_012963.1 Probable glutamine amidotransferase 2142775 8197885 PAS_chr1-4_0397 Pichia pastoris GS115 Probable glutamine amidotransferase XP_002490524.1 2141693 R 644223 CDS PAS_chr1-4_0398 254566829 8196986 2142992..2143981 1 NC_012963.1 hypothetical protein 2143981 8196986 PAS_chr1-4_0398 Pichia pastoris GS115 hypothetical protein XP_002490525.1 2142992 D 644223 CDS PAS_chr1-4_0399 254566831 8196987 complement(2143993..2144499) 1 NC_012963.1 D-Tyr-tRNA(Tyr) deacylase 2144499 8196987 PAS_chr1-4_0399 Pichia pastoris GS115 D-Tyr-tRNA(Tyr) deacylase XP_002490526.1 2143993 R 644223 CDS PAS_chr1-4_0677 254566833 8196988 complement(2144614..2145378) 1 NC_012963.1 hypothetical protein 2145378 8196988 PAS_chr1-4_0677 Pichia pastoris GS115 hypothetical protein XP_002490527.1 2144614 R 644223 CDS PAS_chr1-4_0400 254566835 8197886 2145500..2146855 1 NC_012963.1 hypothetical protein 2146855 8197886 PAS_chr1-4_0400 Pichia pastoris GS115 hypothetical protein XP_002490528.1 2145500 D 644223 CDS PAS_chr1-4_0678 254566837 8196989 2147088..2147630 1 NC_012963.1 hypothetical protein 2147630 8196989 PAS_chr1-4_0678 Pichia pastoris GS115 hypothetical protein XP_002490529.1 2147088 D 644223 CDS PAS_chr1-4_0401 254566839 8197887 complement(2147690..2149897) 1 NC_012963.1 transcriptional regulatory protein 2149897 8197887 PAS_chr1-4_0401 Pichia pastoris GS115 transcriptional regulatory protein XP_002490530.1 2147690 R 644223 CDS PAS_chr1-4_0402 254566841 8196990 complement(2150108..2150638) 1 NC_012963.1 hypothetical protein 2150638 8196990 PAS_chr1-4_0402 Pichia pastoris GS115 hypothetical protein XP_002490531.1 2150108 R 644223 CDS PAS_chr1-4_0403 254566843 8196991 complement(2150904..2152394) 1 NC_012963.1 Essential evolutionarily-conserved nucleolar protein component of the box C/D snoRNP complexes 2152394 8196991 PAS_chr1-4_0403 Pichia pastoris GS115 Essential evolutionarily-conserved nucleolar protein component of the box C/D snoRNP complexes XP_002490532.1 2150904 R 644223 CDS PAS_chr1-4_0404 254566845 8196992 complement(2152687..2153445) 1 NC_012963.1 hypothetical protein 2153445 8196992 PAS_chr1-4_0404 Pichia pastoris GS115 hypothetical protein XP_002490533.1 2152687 R 644223 CDS PAS_chr1-4_0405 254566847 8196993 2153586..2153933 1 NC_012963.1 Subunit of the heterohexameric Gim/prefoldin protein complex 2153933 8196993 PAS_chr1-4_0405 Pichia pastoris GS115 Subunit of the heterohexameric Gim/prefoldin protein complex XP_002490534.1 2153586 D 644223 CDS PAS_chr1-4_0406 254566849 8196994 complement(2154009..2154869) 1 NC_012963.1 Protein required for ubiquinone (coenzyme Q) biosynthesis and respiratory growth 2154869 8196994 PAS_chr1-4_0406 Pichia pastoris GS115 Protein required for ubiquinone (coenzyme Q) biosynthesis and respiratory growth XP_002490535.1 2154009 R 644223 CDS PAS_chr1-4_0407 254566851 8196995 2154944..2155771 1 NC_012963.1 Helix-loop-helix protein that binds the motif CACRTG 2155771 8196995 PAS_chr1-4_0407 Pichia pastoris GS115 Helix-loop-helix protein that binds the motif CACRTG XP_002490536.1 2154944 D 644223 CDS PAS_chr1-4_0408 254566853 8196996 complement(2155828..2156901) 1 NC_012963.1 Amidase, removes the amide group from N-terminal asparagine and glutamine residues 2156901 8196996 PAS_chr1-4_0408 Pichia pastoris GS115 Amidase, removes the amide group from N-terminal asparagine and glutamine residues XP_002490537.1 2155828 R 644223 CDS PAS_chr1-4_0409 254566855 8196997 complement(2157259..2159841) 1 NC_012963.1 Putative positive regulator of mannosylphosphate transferase (Mnn6p) 2159841 8196997 PAS_chr1-4_0409 Pichia pastoris GS115 Putative positive regulator of mannosylphosphate transferase (Mnn6p) XP_002490538.1 2157259 R 644223 CDS PAS_chr1-4_0410 254566857 8196998 complement(2160141..2162474) 1 NC_012963.1 Putative positive regulator of mannosylphosphate transferase (Mnn6p) 2162474 8196998 PAS_chr1-4_0410 Pichia pastoris GS115 Putative positive regulator of mannosylphosphate transferase (Mnn6p) XP_002490539.1 2160141 R 644223 CDS PAS_chr1-4_0411 254566859 8196999 complement(2162805..2163521) 1 NC_012963.1 Essential protein, component of a complex containing Cef1p 2163521 8196999 PAS_chr1-4_0411 Pichia pastoris GS115 Essential protein, component of a complex containing Cef1p XP_002490540.1 2162805 R 644223 CDS PAS_chr1-4_0412 254566861 8197000 2163764..2164000 1 NC_012963.1 Protein component of the large (60S) ribosomal subunit, has similarity to rat L38 ribosomal protein 2164000 8197000 PAS_chr1-4_0412 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit, has similarity to rat L38 ribosomal protein XP_002490541.1 2163764 D 644223 CDS PAS_chr1-4_0413 254566863 8197001 complement(2164152..2165678) 1 NC_012963.1 Peroxisomal integral membrane protein, involved in negative regulation of peroxisome number 2165678 8197001 PAS_chr1-4_0413 Pichia pastoris GS115 Peroxisomal integral membrane protein, involved in negative regulation of peroxisome number XP_002490542.1 2164152 R 644223 CDS PAS_chr1-4_0679 254566865 8197002 complement(2165858..2166976) 1 NC_012963.1 hypothetical protein 2166976 8197002 PAS_chr1-4_0679 Pichia pastoris GS115 hypothetical protein XP_002490543.1 2165858 R 644223 CDS PAS_chr1-4_0414 254566867 8197888 2167126..2167908 1 NC_012963.1 Splicing factor 2167908 8197888 PAS_chr1-4_0414 Pichia pastoris GS115 Splicing factor XP_002490544.1 2167126 D 644223 CDS PAS_chr1-4_0415 254566869 8197003 2168224..2169342 1 NC_012963.1 hypothetical protein 2169342 8197003 PAS_chr1-4_0415 Pichia pastoris GS115 hypothetical protein XP_002490545.1 2168224 D 644223 CDS PAS_chr1-4_0416 254566871 8197004 2169520..2170665 1 NC_012963.1 hypothetical protein 2170665 8197004 PAS_chr1-4_0416 Pichia pastoris GS115 hypothetical protein XP_002490546.1 2169520 D 644223 CDS PAS_chr1-4_0417 254566873 8197005 complement(join(2170704..2172269,2172431..2172514)) 1 NC_012963.1 Alpha-1,2-mannosyltransferase 2172514 8197005 PAS_chr1-4_0417 Pichia pastoris GS115 Alpha-1,2-mannosyltransferase XP_002490547.1 2170704 R 644223 CDS PAS_chr1-4_0418 254566875 8197006 complement(2172834..2174888) 1 NC_012963.1 Phosphoinositide PI4,5P(2) binding protein, forms a complex with Slm2p 2174888 8197006 PAS_chr1-4_0418 Pichia pastoris GS115 Phosphoinositide PI4,5P(2) binding protein, forms a complex with Slm2p XP_002490548.1 2172834 R 644223 CDS PAS_chr1-4_0419 254566877 8197007 complement(2175225..2176013) 1 NC_012963.1 Component of the mitotic exit network 2176013 8197007 PAS_chr1-4_0419 Pichia pastoris GS115 Component of the mitotic exit network XP_002490549.1 2175225 R 644223 CDS PAS_chr1-4_0420 254566879 8197008 2176374..2177258 1 NC_012963.1 Mitochondrial protein, putative inner membrane transporter 2177258 8197008 PAS_chr1-4_0420 Pichia pastoris GS115 Mitochondrial protein, putative inner membrane transporter XP_002490550.1 2176374 D 644223 CDS PAS_chr1-4_0421 254566881 8197009 2177615..2178952 1 NC_012963.1 Homocitrate synthase isozyme, catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate 2178952 8197009 PAS_chr1-4_0421 Pichia pastoris GS115 Homocitrate synthase isozyme, catalyzes the condensation of acetyl-CoA and alpha-ketoglutarate XP_002490551.1 2177615 D 644223 CDS PAS_chr1-4_0422 254566883 8197010 join(2179232..2179238,2179550..2180124) 1 NC_012963.1 40S small ribosomal subunit 2180124 8197010 PAS_chr1-4_0422 Pichia pastoris GS115 40S small ribosomal subunit XP_002490552.1 2179232 D 644223 CDS PAS_chr1-4_0680 254566885 8197011 2180482..2181039 1 NC_012963.1 60S ribosomal protein L21 2181039 8197011 PAS_chr1-4_0680 Pichia pastoris GS115 60S ribosomal protein L21 XP_002490553.1 2180482 D 644223 CDS PAS_chr1-4_0423 254566887 8197424 2181382..2182479 1 NC_012963.1 Mitochondrial pyrimidine nucleotide transporter 2182479 8197424 PAS_chr1-4_0423 Pichia pastoris GS115 Mitochondrial pyrimidine nucleotide transporter XP_002490554.1 2181382 D 644223 CDS PAS_chr1-4_0424 254566889 8197012 2182730..2185711 1 NC_012963.1 Rho GTPase activating protein (RhoGAP) involved in control of the cytoskeleton organization 2185711 8197012 PAS_chr1-4_0424 Pichia pastoris GS115 Rho GTPase activating protein (RhoGAP) involved in control of the cytoskeleton organization XP_002490555.1 2182730 D 644223 CDS PAS_chr1-4_0425 254566891 8197013 complement(2185784..2187037) 1 NC_012963.1 Protein involved in biosynthesis of the coenzyme lipoic acid 2187037 8197013 PAS_chr1-4_0425 Pichia pastoris GS115 Protein involved in biosynthesis of the coenzyme lipoic acid XP_002490556.1 2185784 R 644223 CDS PAS_chr1-4_0426 254566893 8197014 complement(2187280..2188215) 1 NC_012963.1 Endo-beta-1,3-glucanase, major protein of the cell wall, involved in cell wall maintenance 2188215 8197014 PAS_chr1-4_0426 Pichia pastoris GS115 Endo-beta-1,3-glucanase, major protein of the cell wall, involved in cell wall maintenance XP_002490557.1 2187280 R 644223 CDS PAS_chr1-4_0427 254566895 8197015 complement(2188679..2189806) 1 NC_012963.1 hypothetical protein 2189806 8197015 PAS_chr1-4_0427 Pichia pastoris GS115 hypothetical protein XP_002490558.1 2188679 R 644223 CDS PAS_chr1-4_0428 254566897 8197016 complement(2189985..2191520) 1 NC_012963.1 Component of mRNP complexes associated with polyribosomes 2191520 8197016 PAS_chr1-4_0428 Pichia pastoris GS115 Component of mRNP complexes associated with polyribosomes XP_002490559.1 2189985 R 644223 CDS PAS_chr1-4_0429 254566899 8197017 2191724..2192572 1 NC_012963.1 Isopentenyl diphosphate:dimethylallyl diphosphate isomerase (IPP isomerase) 2192572 8197017 PAS_chr1-4_0429 Pichia pastoris GS115 Isopentenyl diphosphate:dimethylallyl diphosphate isomerase (IPP isomerase) XP_002490560.1 2191724 D 644223 CDS PAS_chr1-4_0430 254566901 8197018 2192761..2193981 1 NC_012963.1 Putative cysteine protease similar to mammalian caspases 2193981 8197018 PAS_chr1-4_0430 Pichia pastoris GS115 Putative cysteine protease similar to mammalian caspases XP_002490561.1 2192761 D 644223 CDS PAS_chr1-4_0431 254566903 8197019 complement(2195014..2196654) 1 NC_012963.1 Plasma membrane multidrug transporter of the major facilitator superfamily 2196654 8197019 PAS_chr1-4_0431 Pichia pastoris GS115 Plasma membrane multidrug transporter of the major facilitator superfamily XP_002490562.1 2195014 R 644223 CDS PAS_chr1-4_0432 254566905 8197020 complement(2197555..2202153) 1 NC_012963.1 Guanine nucleotide exchange factor for ADP ribosylation factors (ARFs) 2202153 8197020 PAS_chr1-4_0432 Pichia pastoris GS115 Guanine nucleotide exchange factor for ADP ribosylation factors (ARFs) XP_002490563.1 2197555 R 644223 CDS PAS_chr1-4_0433 254566907 8197021 2202478..2203608 1 NC_012963.1 Peroxisomal signal receptor for the N-terminal nonapeptide signal of peroxisomal matrix proteins 2203608 8197021 PAS_chr1-4_0433 Pichia pastoris GS115 Peroxisomal signal receptor for the N-terminal nonapeptide signal of peroxisomal matrix proteins XP_002490564.1 2202478 D 644223 CDS PAS_chr1-4_0434 254566909 8197022 complement(2203655..2205505) 1 NC_012963.1 hypothetical protein 2205505 8197022 PAS_chr1-4_0434 Pichia pastoris GS115 hypothetical protein XP_002490565.1 2203655 R 644223 CDS PAS_chr1-4_0435 254566911 8197023 complement(2205931..2209206) 1 NC_012963.1 hypothetical protein 2209206 8197023 PAS_chr1-4_0435 Pichia pastoris GS115 hypothetical protein XP_002490566.1 2205931 R 644223 CDS PAS_chr1-4_0436 254566913 8197024 complement(2209451..2210692) 1 NC_012963.1 hypothetical protein 2210692 8197024 PAS_chr1-4_0436 Pichia pastoris GS115 hypothetical protein XP_002490567.1 2209451 R 644223 CDS PAS_chr1-4_0437 254566915 8197025 2211244..2212704 1 NC_012963.1 hypothetical protein 2212704 8197025 PAS_chr1-4_0437 Pichia pastoris GS115 hypothetical protein XP_002490568.1 2211244 D 644223 CDS PAS_chr1-4_0681 254566917 8197026 2213058..2214539 1 NC_012963.1 hypothetical protein 2214539 8197026 PAS_chr1-4_0681 Pichia pastoris GS115 hypothetical protein XP_002490569.1 2213058 D 644223 CDS PAS_chr1-4_0438 254566919 8197425 complement(2214574..2217066) 1 NC_012963.1 hypothetical protein 2217066 8197425 PAS_chr1-4_0438 Pichia pastoris GS115 hypothetical protein XP_002490570.1 2214574 R 644223 CDS PAS_chr1-4_0439 254566921 8197027 2217360..2219342 1 NC_012963.1 hypothetical protein 2219342 8197027 PAS_chr1-4_0439 Pichia pastoris GS115 hypothetical protein XP_002490571.1 2217360 D 644223 CDS PAS_chr1-4_0440 254566923 8197028 complement(2219382..2220932) 1 NC_012963.1 B-type cyclin involved in cell cycle progression 2220932 8197028 PAS_chr1-4_0440 Pichia pastoris GS115 B-type cyclin involved in cell cycle progression XP_002490572.1 2219382 R 644223 CDS PAS_chr1-4_0441 254566925 8197029 join(2221476..2221523,2222094..2224184) 1 NC_012963.1 Peroxisomal primary amine oxidase 2224184 8197029 PAS_chr1-4_0441 Pichia pastoris GS115 Peroxisomal primary amine oxidase XP_002490573.1 2221476 D 644223 CDS PAS_chr1-4_0442 254566927 8197030 join(2224351..2227501,2227605..2227645) 1 NC_012963.1 hypothetical protein 2227645 8197030 PAS_chr1-4_0442 Pichia pastoris GS115 hypothetical protein XP_002490574.1 2224351 D 644223 CDS PAS_chr1-4_0443 254566929 8197031 complement(2227704..2229596) 1 NC_012963.1 hypothetical protein 2229596 8197031 PAS_chr1-4_0443 Pichia pastoris GS115 hypothetical protein XP_002490575.1 2227704 R 644223 CDS PAS_chr1-4_0444 254566931 8197032 2229704..2230387 1 NC_012963.1 Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p) 2230387 8197032 PAS_chr1-4_0444 Pichia pastoris GS115 Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p) XP_002490576.1 2229704 D 644223 CDS PAS_chr1-4_0445 254566933 8197033 complement(2230529..2231014) 1 NC_012963.1 Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase 2231014 8197033 PAS_chr1-4_0445 Pichia pastoris GS115 Delta subunit of the central stalk of mitochondrial F1F0 ATP synthase XP_002490577.1 2230529 R 644223 CDS PAS_chr1-4_0446 254566935 8197034 2231356..2232231 1 NC_012963.1 hypothetical protein 2232231 8197034 PAS_chr1-4_0446 Pichia pastoris GS115 hypothetical protein XP_002490578.1 2231356 D 644223 CDS PAS_chr1-4_0447 254566937 8197035 2232453..2233877 1 NC_012963.1 Hexokinase isoenzyme 2 that catalyzes phosphorylation of glucose in the cytosol 2233877 8197035 PAS_chr1-4_0447 Pichia pastoris GS115 Hexokinase isoenzyme 2 that catalyzes phosphorylation of glucose in the cytosol XP_002490579.1 2232453 D 644223 CDS PAS_chr1-4_0448 254566939 8197036 2233956..2234537 1 NC_012963.1 Catalytic component of UDP-GlcNAc transferase 2234537 8197036 PAS_chr1-4_0448 Pichia pastoris GS115 Catalytic component of UDP-GlcNAc transferase XP_002490580.1 2233956 D 644223 CDS PAS_chr1-4_0449 254566941 8197037 complement(2234560..2236269) 1 NC_012963.1 hypothetical protein 2236269 8197037 PAS_chr1-4_0449 Pichia pastoris GS115 hypothetical protein XP_002490581.1 2234560 R 644223 CDS PAS_chr1-4_0450 254566943 8197038 2236866..2237780 1 NC_012963.1 N-succinyl-5-aminoimidazole-4-carboxamide ribotide (SAICAR) synthetase 2237780 8197038 PAS_chr1-4_0450 Pichia pastoris GS115 N-succinyl-5-aminoimidazole-4-carboxamide ribotide (SAICAR) synthetase XP_002490582.1 2236866 D 644223 CDS PAS_chr1-4_0451 254566945 8197039 2237939..2239306 1 NC_012963.1 protein kinase 2239306 8197039 PAS_chr1-4_0451 Pichia pastoris GS115 protein kinase XP_002490583.1 2237939 D 644223 CDS PAS_chr1-4_0452 254566947 8197040 complement(2239344..2241716) 1 NC_012963.1 Essential 88kDa subunit of the exocyst complex 2241716 8197040 PAS_chr1-4_0452 Pichia pastoris GS115 Essential 88kDa subunit of the exocyst complex XP_002490584.1 2239344 R 644223 CDS PAS_chr1-4_0453 254566949 8197041 2242047..2242823 1 NC_012963.1 hypothetical protein 2242823 8197041 PAS_chr1-4_0453 Pichia pastoris GS115 hypothetical protein XP_002490585.1 2242047 D 644223 CDS PAS_chr1-4_0454 254566951 8197042 complement(2243068..2244948) 1 NC_012963.1 COP9 signalosome complex subunit 2 2244948 8197042 PAS_chr1-4_0454 Pichia pastoris GS115 COP9 signalosome complex subunit 2 XP_002490586.1 2243068 R 644223 CDS PAS_chr1-4_0682 254566953 8197043 complement(2245111..2245632) 1 NC_012963.1 hypothetical protein 2245632 8197043 PAS_chr1-4_0682 Pichia pastoris GS115 hypothetical protein XP_002490587.1 2245111 R 644223 CDS PAS_chr1-4_0455 254566955 8197426 2245796..2246494 1 NC_012963.1 Protein involved in rRNA processing 2246494 8197426 PAS_chr1-4_0455 Pichia pastoris GS115 Protein involved in rRNA processing XP_002490588.1 2245796 D 644223 CDS PAS_chr1-4_0456 254566957 8197044 complement(2246517..2249291) 1 NC_012963.1 Polyphosphatidylinositol phosphatase 2249291 8197044 PAS_chr1-4_0456 Pichia pastoris GS115 Polyphosphatidylinositol phosphatase XP_002490589.1 2246517 R 644223 CDS PAS_chr1-4_0457 254566959 8197045 2249436..2251436 1 NC_012963.1 tRNA methyltransferase required for the synthesis of wybutosine 2251436 8197045 PAS_chr1-4_0457 Pichia pastoris GS115 tRNA methyltransferase required for the synthesis of wybutosine XP_002490590.1 2249436 D 644223 CDS PAS_chr1-4_0458 254566961 8197046 complement(2251545..2253371) 1 NC_012963.1 Dihydroxyacid dehydratase 2253371 8197046 PAS_chr1-4_0458 Pichia pastoris GS115 Dihydroxyacid dehydratase XP_002490591.1 2251545 R 644223 CDS PAS_chr1-4_0459 254566963 8197047 2253809..2255092 1 NC_012963.1 Malate synthase 2255092 8197047 PAS_chr1-4_0459 Pichia pastoris GS115 Malate synthase XP_002490592.1 2253809 D 644223 CDS PAS_chr1-4_0460 254566965 8197048 complement(join(2255103..2255801,2255856..2255915)) 1 NC_012963.1 Uridine kinase (Uridine monophosphokinase) 2255915 8197048 PAS_chr1-4_0460 Pichia pastoris GS115 Uridine kinase (Uridine monophosphokinase) XP_002490593.1 2255103 R 644223 CDS PAS_chr1-4_0461 254566967 8197049 2256053..2257243 1 NC_012963.1 Nucleolar protein required for maturation of 18S rRNA 2257243 8197049 PAS_chr1-4_0461 Pichia pastoris GS115 Nucleolar protein required for maturation of 18S rRNA XP_002490594.1 2256053 D 644223 CDS PAS_chr1-4_0462 254566969 8197050 join(2257972..2258004,2258050..2258941,2258973..2259001) 1 NC_012963.1 Membrane glycoprotein v-SNARE 2259001 8197050 PAS_chr1-4_0462 Pichia pastoris GS115 Membrane glycoprotein v-SNARE XP_002490595.1 2257972 D 644223 CDS PAS_chr1-4_0463 254566971 8197051 complement(2259313..2260695) 1 NC_012963.1 Cytosolic seryl-tRNA synthetase, class II aminoacyl-tRNA synthetase 2260695 8197051 PAS_chr1-4_0463 Pichia pastoris GS115 Cytosolic seryl-tRNA synthetase, class II aminoacyl-tRNA synthetase XP_002490596.1 2259313 R 644223 CDS PAS_chr1-4_0464 254566973 8197052 2261005..2262288 1 NC_012963.1 hypothetical protein 2262288 8197052 PAS_chr1-4_0464 Pichia pastoris GS115 hypothetical protein XP_002490597.1 2261005 D 644223 CDS PAS_chr1-4_0465 254566975 8197053 join(2262569..2262621,2262683..2263499) 1 NC_012963.1 Gamma subunit of the F1 sector of mitochondrial F1F0 ATP synthase 2263499 8197053 PAS_chr1-4_0465 Pichia pastoris GS115 Gamma subunit of the F1 sector of mitochondrial F1F0 ATP synthase XP_002490598.1 2262569 D 644223 CDS PAS_chr1-4_0466 254566977 8197054 complement(2265505..2266674) 1 NC_012963.1 hypothetical protein 2266674 8197054 PAS_chr1-4_0466 Pichia pastoris GS115 hypothetical protein XP_002490599.1 2265505 R 644223 CDS PAS_chr1-4_0467 254566979 8197055 join(2266834..2266891,2267052..2268394) 1 NC_012963.1 Cop9 signalosome complex subunit 11 2268394 8197055 PAS_chr1-4_0467 Pichia pastoris GS115 Cop9 signalosome complex subunit 11 XP_002490600.1 2266834 D 644223 CDS PAS_chr1-4_0468 254566981 8197056 complement(2268438..2269943) 1 NC_012963.1 Putative mitochondrial metallopeptidase 2269943 8197056 PAS_chr1-4_0468 Pichia pastoris GS115 Putative mitochondrial metallopeptidase XP_002490601.1 2268438 R 644223 CDS PAS_chr1-4_0469 254566983 8197057 2270125..2270469 1 NC_012963.1 Mitochondrial ribosomal protein of the small subunit 2270469 8197057 PAS_chr1-4_0469 Pichia pastoris GS115 Mitochondrial ribosomal protein of the small subunit XP_002490602.1 2270125 D 644223 CDS PAS_chr1-4_0470 254566985 8197058 complement(2270524..2272392) 1 NC_012963.1 Membrane protein involved in the synthesis of N-acetylglucosaminyl phosphatidylinositol (GlcNAc-PI) 2272392 8197058 PAS_chr1-4_0470 Pichia pastoris GS115 Membrane protein involved in the synthesis of N-acetylglucosaminyl phosphatidylinositol (GlcNAc-PI) XP_002490603.1 2270524 R 644223 CDS PAS_chr1-4_0471 254566987 8197059 complement(2272671..2273462) 1 NC_012963.1 Protein component of the small (40S) ribosomal subunit, nearly identical to Rps0Bp 2273462 8197059 PAS_chr1-4_0471 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit, nearly identical to Rps0Bp XP_002490604.1 2272671 R 644223 CDS PAS_chr1-4_0472 254566989 8197060 2274063..2276477 1 NC_012963.1 Protein with sequence similarity to iron/copper reductases, involved in iron homeostasis 2276477 8197060 PAS_chr1-4_0472 Pichia pastoris GS115 Protein with sequence similarity to iron/copper reductases, involved in iron homeostasis XP_002490605.1 2274063 D 644223 CDS PAS_chr1-4_0473 254566991 8197061 join(2276611..2277529,2277586..2278181) 1 NC_012963.1 Meiosis-specific APC/C activator protein AMA1 2278181 8197061 PAS_chr1-4_0473 Pichia pastoris GS115 Meiosis-specific APC/C activator protein AMA1 XP_002490606.1 2276611 D 644223 CDS PAS_chr1-4_0474 254566993 8197062 complement(2278189..2279775) 1 NC_012963.1 hypothetical protein 2279775 8197062 PAS_chr1-4_0474 Pichia pastoris GS115 hypothetical protein XP_002490607.1 2278189 R 644223 CDS PAS_chr1-4_0475 254566995 8197063 2279990..2281474 1 NC_012963.1 Dolichyl-phosphoglucose-dependent alpha-1,2 glucosyltransferase of the ER 2281474 8197063 PAS_chr1-4_0475 Pichia pastoris GS115 Dolichyl-phosphoglucose-dependent alpha-1,2 glucosyltransferase of the ER XP_002490608.1 2279990 D 644223 CDS PAS_chr1-4_0476 254566997 8197064 complement(2281464..2282513) 1 NC_012963.1 Cell wall assembly regulator SMI1 2282513 8197064 PAS_chr1-4_0476 Pichia pastoris GS115 Cell wall assembly regulator SMI1 XP_002490609.1 2281464 R 644223 CDS PAS_chr1-4_0683 254566999 8197065 complement(2282668..2283579) 1 NC_012963.1 hypothetical protein 2283579 8197065 PAS_chr1-4_0683 Pichia pastoris GS115 hypothetical protein XP_002490610.1 2282668 R 644223 CDS PAS_chr1-4_0478 254567001 8197427 2283916..2284605 1 NC_012963.1 Regulatory, non-ATPase subunit of the 26S proteasome 2284605 8197427 PAS_chr1-4_0478 Pichia pastoris GS115 Regulatory, non-ATPase subunit of the 26S proteasome XP_002490611.1 2283916 D 644223 CDS PAS_chr1-4_0479 254567003 8197066 2285006..2286736 1 NC_012963.1 General amino acid permease 2286736 8197066 PAS_chr1-4_0479 Pichia pastoris GS115 General amino acid permease XP_002490612.1 2285006 D 644223 CDS PAS_chr1-4_0480 254567005 8197067 2286983..2288401 1 NC_012963.1 Essential protein with two zinc fingers, present in the nucleus of growing cells 2288401 8197067 PAS_chr1-4_0480 Pichia pastoris GS115 Essential protein with two zinc fingers, present in the nucleus of growing cells XP_002490613.1 2286983 D 644223 CDS PAS_chr1-4_0481 254567007 8197068 complement(2288506..2288784) 1 NC_012963.1 hypothetical protein 2288784 8197068 PAS_chr1-4_0481 Pichia pastoris GS115 hypothetical protein XP_002490614.1 2288506 R 644223 CDS PAS_chr1-4_0482 254567009 8197069 complement(2289103..2289468) 1 NC_012963.1 Evolutionarily conserved copper-binding protein of the mitochondrial inner membrane 2289468 8197069 PAS_chr1-4_0482 Pichia pastoris GS115 Evolutionarily conserved copper-binding protein of the mitochondrial inner membrane XP_002490615.1 2289103 R 644223 CDS PAS_chr1-4_0483 254567011 8197070 2289677..2290261 1 NC_012963.1 hypothetical protein 2290261 8197070 PAS_chr1-4_0483 Pichia pastoris GS115 hypothetical protein XP_002490616.1 2289677 D 644223 CDS PAS_chr1-4_0484 254567013 8197071 complement(2290280..2290612) 1 NC_012963.1 Mitochondrial ribosomal protein of the large subunit 2290612 8197071 PAS_chr1-4_0484 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002490617.1 2290280 R 644223 CDS PAS_chr1-4_0485 254567015 8197072 2290936..2291223 1 NC_012963.1 hypothetical protein 2291223 8197072 PAS_chr1-4_0485 Pichia pastoris GS115 hypothetical protein XP_002490618.1 2290936 D 644223 CDS PAS_chr1-4_0486 254567017 8197073 2291941..2292945 1 NC_012963.1 hypothetical protein 2292945 8197073 PAS_chr1-4_0486 Pichia pastoris GS115 hypothetical protein XP_002490619.1 2291941 D 644223 CDS PAS_chr1-4_0487 254567019 8197074 complement(join(2293025..2293521,2293574..2293610)) 1 NC_012963.1 hypothetical protein 2293610 8197074 PAS_chr1-4_0487 Pichia pastoris GS115 hypothetical protein XP_002490620.1 2293025 R 644223 CDS PAS_chr1-4_0684 254567021 8197075 complement(2293918..2295762) 1 NC_012963.1 hypothetical protein 2295762 8197075 PAS_chr1-4_0684 Pichia pastoris GS115 hypothetical protein XP_002490621.1 2293918 R 644223 CDS PAS_chr1-4_0488 254567023 8197428 complement(2295967..2296641) 1 NC_012963.1 hypothetical protein 2296641 8197428 PAS_chr1-4_0488 Pichia pastoris GS115 hypothetical protein XP_002490622.1 2295967 R 644223 CDS PAS_chr1-4_0489 254567025 8197076 complement(2296824..2298008) 1 NC_012963.1 Cystathionine gamma-lyase 2298008 8197076 PAS_chr1-4_0489 Pichia pastoris GS115 Cystathionine gamma-lyase XP_002490623.1 2296824 R 644223 CDS PAS_chr1-4_0490 254567027 8197077 complement(join(2298537..2298857,2299161..2299196)) 1 NC_012963.1 60S acidic ribosomal protein P2-A 2299196 8197077 PAS_chr1-4_0490 Pichia pastoris GS115 60S acidic ribosomal protein P2-A XP_002490624.1 2298537 R 644223 CDS PAS_chr1-4_0491 254567029 8197078 2299356..2299793 1 NC_012963.1 Protein component of the small (40S) ribosomal subunit 2299793 8197078 PAS_chr1-4_0491 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002490625.1 2299356 D 644223 CDS PAS_chr1-4_0492 254567031 8197079 complement(2299840..2301363) 1 NC_012963.1 Transcriptional modulator 2301363 8197079 PAS_chr1-4_0492 Pichia pastoris GS115 Transcriptional modulator XP_002490626.1 2299840 R 644223 CDS PAS_chr1-4_0493 254567033 8197080 2301743..2303080 1 NC_012963.1 Nucleolar protein, required for pre-25S rRNA processing 2303080 8197080 PAS_chr1-4_0493 Pichia pastoris GS115 Nucleolar protein, required for pre-25S rRNA processing XP_002490627.1 2301743 D 644223 CDS PAS_chr1-4_0495 254567035 8197081 2304992..2305960 1 NC_012963.1 hypothetical protein 2305960 8197081 PAS_chr1-4_0495 Pichia pastoris GS115 hypothetical protein XP_002490628.1 2304992 D 644223 CDS PAS_chr1-4_0496 254567037 8197082 complement(2305957..2307441) 1 NC_012963.1 Glutathione synthetase 2307441 8197082 PAS_chr1-4_0496 Pichia pastoris GS115 Glutathione synthetase XP_002490629.1 2305957 R 644223 CDS PAS_chr1-4_0685 254567039 8197083 complement(2307568..2309796) 1 NC_012963.1 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 2309796 8197083 PAS_chr1-4_0685 Pichia pastoris GS115 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3 XP_002490630.1 2307568 R 644223 CDS PAS_chr1-4_0497 254567041 8197429 complement(2310011..2312569) 1 NC_012963.1 Kinesin-related motor protein involved in mitotic spindle positioning 2312569 8197429 PAS_chr1-4_0497 Pichia pastoris GS115 Kinesin-related motor protein involved in mitotic spindle positioning XP_002490631.1 2310011 R 644223 CDS PAS_chr1-4_0498 254567043 8197084 complement(2312825..2314093) 1 NC_012963.1 One of three possible beta-subunits of the Snf1 kinase complex 2314093 8197084 PAS_chr1-4_0498 Pichia pastoris GS115 One of three possible beta-subunits of the Snf1 kinase complex XP_002490632.1 2312825 R 644223 CDS PAS_chr1-4_0499 254567045 8197085 2314337..2315806 1 NC_012963.1 hypothetical protein 2315806 8197085 PAS_chr1-4_0499 Pichia pastoris GS115 hypothetical protein XP_002490633.1 2314337 D 644223 CDS PAS_chr1-4_0500 254567047 8197086 complement(2315883..2316839) 1 NC_012963.1 hypothetical protein 2316839 8197086 PAS_chr1-4_0500 Pichia pastoris GS115 hypothetical protein XP_002490634.1 2315883 R 644223 CDS PAS_chr1-4_0501 254567049 8197087 2317003..2318088 1 NC_012963.1 Protein involved in exosome mediated 3' to 5' mRNA degradation 2318088 8197087 PAS_chr1-4_0501 Pichia pastoris GS115 Protein involved in exosome mediated 3' to 5' mRNA degradation XP_002490635.1 2317003 D 644223 CDS PAS_chr1-4_0502 254567051 8197088 complement(2318782..2320047) 1 NC_012963.1 Essential nuclear protein possibly involved in bud formation and morphogenesis 2320047 8197088 PAS_chr1-4_0502 Pichia pastoris GS115 Essential nuclear protein possibly involved in bud formation and morphogenesis XP_002490636.1 2318782 R 644223 CDS PAS_chr1-4_0503 254567053 8197089 2320228..2322759 1 NC_012963.1 Endosomal subunit of membrane-associated retromer complex required for retrograde transport 2322759 8197089 PAS_chr1-4_0503 Pichia pastoris GS115 Endosomal subunit of membrane-associated retromer complex required for retrograde transport XP_002490637.1 2320228 D 644223 CDS PAS_chr1-4_0504 254567055 8197090 complement(2322810..2322980) 1 NC_012963.1 40S ribosomal protein subunit 2322980 8197090 PAS_chr1-4_0504 Pichia pastoris GS115 40S ribosomal protein subunit XP_002490638.1 2322810 R 644223 CDS PAS_chr1-4_0506 254567057 8197091 2323529..2325832 1 NC_012963.1 Protein required for processing of 20S pre-rRNA in the cytoplasm 2325832 8197091 PAS_chr1-4_0506 Pichia pastoris GS115 Protein required for processing of 20S pre-rRNA in the cytoplasm XP_002490639.1 2323529 D 644223 CDS PAS_chr1-4_0507 254567059 8197092 2325953..2327254 1 NC_012963.1 Zinc finger protein 2327254 8197092 PAS_chr1-4_0507 Pichia pastoris GS115 Zinc finger protein XP_002490640.1 2325953 D 644223 CDS PAS_chr1-4_0508 254567061 8197093 complement(2327280..2329727) 1 NC_012963.1 Protein involved in regulated synthesis of PtdIns(3,5)P(2) 2329727 8197093 PAS_chr1-4_0508 Pichia pastoris GS115 Protein involved in regulated synthesis of PtdIns(3,5)P(2) XP_002490641.1 2327280 R 644223 CDS PAS_chr1-4_0510 254567063 8197094 complement(2330123..2330824) 1 NC_012963.1 CFEM protein 2330824 8197094 PAS_chr1-4_0510 Pichia pastoris GS115 CFEM protein XP_002490642.1 2330123 R 644223 CDS PAS_chr1-4_0511 254567065 8197095 2332444..2335611 1 NC_012963.1 Metalloprotease 2335611 8197095 PAS_chr1-4_0511 Pichia pastoris GS115 Metalloprotease XP_002490643.1 2332444 D 644223 CDS PAS_chr1-4_0512 254567067 8197096 2335748..2338399 1 NC_012963.1 hypothetical protein 2338399 8197096 PAS_chr1-4_0512 Pichia pastoris GS115 hypothetical protein XP_002490644.1 2335748 D 644223 CDS PAS_chr1-4_0513 254567069 8197097 complement(join(2338685..2342576,2342689..2342768)) 1 NC_012963.1 DNA repair protein RAD50 2342768 8197097 PAS_chr1-4_0513 Pichia pastoris GS115 DNA repair protein RAD50 XP_002490645.1 2338685 R 644223 CDS PAS_chr1-4_0514 254567071 8197098 2342841..2345126 1 NC_012963.1 hypothetical protein 2345126 8197098 PAS_chr1-4_0514 Pichia pastoris GS115 hypothetical protein XP_002490646.1 2342841 D 644223 CDS PAS_chr1-4_0515 254567073 8197099 2345364..2347259 1 NC_012963.1 Protein involved in nitrosoguanidine (MNNG) resistance 2347259 8197099 PAS_chr1-4_0515 Pichia pastoris GS115 Protein involved in nitrosoguanidine (MNNG) resistance XP_002490647.1 2345364 D 644223 CDS PAS_chr1-4_0516 254567075 8197100 2348007..2348999 1 NC_012963.1 Putative transcription factor 2348999 8197100 PAS_chr1-4_0516 Pichia pastoris GS115 Putative transcription factor XP_002490648.1 2348007 D 644223 CDS PAS_chr1-4_0517 254567077 8197101 2349258..2351723 1 NC_012963.1 Subunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P 2351723 8197101 PAS_chr1-4_0517 Pichia pastoris GS115 Subunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P XP_002490649.1 2349258 D 644223 CDS PAS_chr1-4_0518 254567079 8197102 complement(2352153..2353883) 1 NC_012963.1 hypothetical protein 2353883 8197102 PAS_chr1-4_0518 Pichia pastoris GS115 hypothetical protein XP_002490650.1 2352153 R 644223 CDS PAS_chr1-4_0519 254567081 8197103 join(2354579..2355897,2355950..2356160) 1 NC_012963.1 Co-chaperone that stimulates the ATPase activity of Ssa1p 2356160 8197103 PAS_chr1-4_0519 Pichia pastoris GS115 Co-chaperone that stimulates the ATPase activity of Ssa1p XP_002490651.1 2354579 D 644223 CDS PAS_chr1-4_0520 254567083 8197104 2356770..2358155 1 NC_012963.1 Guanine deaminase, a catabolic enzyme of the guanine salvage pathway 2358155 8197104 PAS_chr1-4_0520 Pichia pastoris GS115 Guanine deaminase, a catabolic enzyme of the guanine salvage pathway XP_002490652.1 2356770 D 644223 CDS PAS_chr1-4_0521 254567085 8197105 complement(2358158..2360212) 1 NC_012963.1 Protein SQS1 2360212 8197105 PAS_chr1-4_0521 Pichia pastoris GS115 Protein SQS1 XP_002490653.1 2358158 R 644223 CDS PAS_chr1-4_0522 254567087 8197106 2360487..2362082 1 NC_012963.1 Conserved cysteine protease required for autophagy 2362082 8197106 PAS_chr1-4_0522 Pichia pastoris GS115 Conserved cysteine protease required for autophagy XP_002490654.1 2360487 D 644223 CDS PAS_chr1-4_0523 254567089 8197107 2362233..2362928 1 NC_012963.1 Transcription/RNA-processing factor 2362928 8197107 PAS_chr1-4_0523 Pichia pastoris GS115 Transcription/RNA-processing factor XP_002490655.1 2362233 D 644223 CDS PAS_chr1-4_0524 254567091 8197108 complement(2363076..2364506) 1 NC_012963.1 Guanine deaminase, a catabolic enzyme of the guanine salvage pathway 2364506 8197108 PAS_chr1-4_0524 Pichia pastoris GS115 Guanine deaminase, a catabolic enzyme of the guanine salvage pathway XP_002490656.1 2363076 R 644223 CDS PAS_chr1-4_0525 254567093 8197109 complement(2364573..2365964) 1 NC_012963.1 hypothetical protein 2365964 8197109 PAS_chr1-4_0525 Pichia pastoris GS115 hypothetical protein XP_002490657.1 2364573 R 644223 CDS PAS_chr1-4_0526 254567095 8197110 complement(2366182..2367546) 1 NC_012963.1 Regulatory protein MIG1 2367546 8197110 PAS_chr1-4_0526 Pichia pastoris GS115 Regulatory protein MIG1 XP_002490658.1 2366182 R 644223 CDS PAS_chr1-4_0686 254567097 8197111 complement(2367999..2368460) 1 NC_012963.1 Small nuclear ribonucleoprotein-associated protein 2368460 8197111 PAS_chr1-4_0686 Pichia pastoris GS115 Small nuclear ribonucleoprotein-associated protein XP_002490659.1 2367999 R 644223 CDS PAS_chr1-4_0527 254567099 8197430 2368686..2369132 1 NC_012963.1 hypothetical protein 2369132 8197430 PAS_chr1-4_0527 Pichia pastoris GS115 hypothetical protein XP_002490660.1 2368686 D 644223 CDS PAS_chr1-4_0528 254567101 8197112 complement(2369186..2369848) 1 NC_012963.1 GTPase of the Ypt/Rab family, very similar to Ypt31p 2369848 8197112 PAS_chr1-4_0528 Pichia pastoris GS115 GTPase of the Ypt/Rab family, very similar to Ypt31p XP_002490661.1 2369186 R 644223 CDS PAS_chr1-4_0529 254567103 8197113 2370291..2373308 1 NC_012963.1 Subunit of the heterodimeric FACT complex (Spt16p-Pob3p) 2373308 8197113 PAS_chr1-4_0529 Pichia pastoris GS115 Subunit of the heterodimeric FACT complex (Spt16p-Pob3p) XP_002490662.1 2370291 D 644223 CDS PAS_chr1-4_0530 254567105 8197661 complement(2373991..2375553) 1 NC_012963.1 hypothetical protein 2375553 8197661 PAS_chr1-4_0530 Pichia pastoris GS115 hypothetical protein XP_002490663.1 2373991 R 644223 CDS PAS_chr1-4_0531 254567107 8197662 2376204..2376974 1 NC_012963.1 hypothetical protein 2376974 8197662 PAS_chr1-4_0531 Pichia pastoris GS115 hypothetical protein XP_002490664.1 2376204 D 644223 CDS PAS_chr1-4_0532 254567109 8197663 complement(2377683..2379023) 1 NC_012963.1 Phosphatidylinositol transfer protein 2379023 8197663 PAS_chr1-4_0532 Pichia pastoris GS115 Phosphatidylinositol transfer protein XP_002490665.1 2377683 R 644223 CDS PAS_chr1-4_0533 254567111 8197664 2379921..2382437 1 NC_012963.1 Guanine nucleotide exchange factor (GEF or GDP-release factor) for Cdc42p 2382437 8197664 PAS_chr1-4_0533 Pichia pastoris GS115 Guanine nucleotide exchange factor (GEF or GDP-release factor) for Cdc42p XP_002490666.1 2379921 D 644223 CDS PAS_chr1-4_0534 254567113 8197665 complement(2382489..2385131) 1 NC_012963.1 Mitochondrial leucyl-tRNA synthetase 2385131 8197665 PAS_chr1-4_0534 Pichia pastoris GS115 Mitochondrial leucyl-tRNA synthetase XP_002490667.1 2382489 R 644223 CDS PAS_chr1-4_0535 254567115 8197666 2385319..2388549 1 NC_012963.1 Structural maintenance of chromosomes protein 2388549 8197666 PAS_chr1-4_0535 Pichia pastoris GS115 Structural maintenance of chromosomes protein XP_002490668.1 2385319 D 644223 CDS PAS_chr1-4_0687 254567117 8197667 2388657..2390723 1 NC_012963.1 hypothetical protein 2390723 8197667 PAS_chr1-4_0687 Pichia pastoris GS115 hypothetical protein XP_002490669.1 2388657 D 644223 CDS PAS_chr1-4_0536 254567119 8197431 complement(2390805..2391068) 1 NC_012963.1 BolA-like protein 2391068 8197431 PAS_chr1-4_0536 Pichia pastoris GS115 BolA-like protein XP_002490670.1 2390805 R 644223 CDS PAS_chr1-4_0537 254567121 8197668 2391204..2392043 1 NC_012963.1 hypothetical protein 2392043 8197668 PAS_chr1-4_0537 Pichia pastoris GS115 hypothetical protein XP_002490671.1 2391204 D 644223 CDS PAS_chr1-4_0688 254567123 8197669 join(2392177..2392726,2392935..2393362) 1 NC_012963.1 hypothetical protein 2393362 8197669 PAS_chr1-4_0688 Pichia pastoris GS115 hypothetical protein XP_002490672.1 2392177 D 644223 CDS PAS_chr1-4_0538 254567125 8197432 2393694..2395805 1 NC_012963.1 Fatty-acyl coenzyme A oxidase 2395805 8197432 PAS_chr1-4_0538 Pichia pastoris GS115 Fatty-acyl coenzyme A oxidase XP_002490673.1 2393694 D 644223 CDS PAS_chr1-4_0539 254567127 8197670 2395957..2396913 1 NC_012963.1 Essential nucleolar protein involved in pre-18S rRNA processing 2396913 8197670 PAS_chr1-4_0539 Pichia pastoris GS115 Essential nucleolar protein involved in pre-18S rRNA processing XP_002490674.1 2395957 D 644223 CDS PAS_chr1-4_0540 254567129 8197671 complement(2396972..2399284) 1 NC_012963.1 hypothetical protein 2399284 8197671 PAS_chr1-4_0540 Pichia pastoris GS115 hypothetical protein XP_002490675.1 2396972 R 644223 CDS PAS_chr1-4_0541 254567131 8197672 2399757..2404781 1 NC_012963.1 Separase, a caspase-like cysteine proteas 2404781 8197672 PAS_chr1-4_0541 Pichia pastoris GS115 Separase, a caspase-like cysteine proteas XP_002490676.1 2399757 D 644223 CDS PAS_chr1-4_0542 254567133 8197673 complement(2404782..2405564) 1 NC_012963.1 hypothetical protein 2405564 8197673 PAS_chr1-4_0542 Pichia pastoris GS115 hypothetical protein XP_002490677.1 2404782 R 644223 CDS PAS_chr1-4_0543 254567135 8197674 2406043..2406561 1 NC_012963.1 hypothetical protein 2406561 8197674 PAS_chr1-4_0543 Pichia pastoris GS115 hypothetical protein XP_002490678.1 2406043 D 644223 CDS PAS_chr1-4_0544 254567137 8197675 complement(2406575..2408770) 1 NC_012963.1 hypothetical protein 2408770 8197675 PAS_chr1-4_0544 Pichia pastoris GS115 hypothetical protein XP_002490679.1 2406575 R 644223 CDS PAS_chr1-4_0545 254567139 8197676 2408950..2410185 1 NC_012963.1 Methylthioribose-1-phosphate isomerase 2410185 8197676 PAS_chr1-4_0545 Pichia pastoris GS115 Methylthioribose-1-phosphate isomerase XP_002490680.1 2408950 D 644223 CDS PAS_chr1-4_0689 254567141 8197677 2410807..2412087 1 NC_012963.1 hypothetical protein 2412087 8197677 PAS_chr1-4_0689 Pichia pastoris GS115 hypothetical protein XP_002490681.1 2410807 D 644223 CDS PAS_chr1-4_0546 254567143 8197433 complement(2412412..2417382) 1 NC_012963.1 Clathrin heavy chain, subunit of the major coat protein 2417382 8197433 PAS_chr1-4_0546 Pichia pastoris GS115 Clathrin heavy chain, subunit of the major coat protein XP_002490682.1 2412412 R 644223 CDS PAS_chr1-4_0547 254567145 8197678 complement(2417633..2418145) 1 NC_012963.1 peroxiredoxin 2418145 8197678 PAS_chr1-4_0547 Pichia pastoris GS115 peroxiredoxin XP_002490683.1 2417633 R 644223 CDS PAS_chr1-4_0548 254567147 8197679 2418626..2420059 1 NC_012963.1 Vacuolar proteinase B (yscB), a serine protease of the subtilisin family 2420059 8197679 PAS_chr1-4_0548 Pichia pastoris GS115 Vacuolar proteinase B (yscB), a serine protease of the subtilisin family XP_002490684.1 2418626 D 644223 CDS PAS_chr1-4_0549 254567149 8197680 complement(2420084..2423089) 1 NC_012963.1 ATP-dependent DNA helicase 2423089 8197680 PAS_chr1-4_0549 Pichia pastoris GS115 ATP-dependent DNA helicase XP_002490685.1 2420084 R 644223 CDS PAS_chr1-4_0550 254567151 8197681 2423348..2424838 1 NC_012963.1 hypothetical protein 2424838 8197681 PAS_chr1-4_0550 Pichia pastoris GS115 hypothetical protein XP_002490686.1 2423348 D 644223 CDS PAS_chr1-4_0551 254567153 8197682 complement(2424867..2428913) 1 NC_012963.1 Formylglycinamidine-ribonucleotide (FGAM)-synthetase 2428913 8197682 PAS_chr1-4_0551 Pichia pastoris GS115 Formylglycinamidine-ribonucleotide (FGAM)-synthetase XP_002490687.1 2424867 R 644223 CDS PAS_chr1-4_0552 254567155 8197683 2429280..2430722 1 NC_012963.1 Ammonium permease 2430722 8197683 PAS_chr1-4_0552 Pichia pastoris GS115 Ammonium permease XP_002490688.1 2429280 D 644223 CDS PAS_chr1-4_0553 254567157 8197684 complement(2430757..2431470) 1 NC_012963.1 hypothetical protein 2431470 8197684 PAS_chr1-4_0553 Pichia pastoris GS115 hypothetical protein XP_002490689.1 2430757 R 644223 CDS PAS_chr1-4_0554 254567159 8197685 2431574..2431873 1 NC_012963.1 hypothetical protein 2431873 8197685 PAS_chr1-4_0554 Pichia pastoris GS115 hypothetical protein XP_002490690.1 2431574 D 644223 CDS PAS_chr1-4_0555 254567161 8197686 2432174..2436115 1 NC_012963.1 Adapter protein for pexophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway 2436115 8197686 PAS_chr1-4_0555 Pichia pastoris GS115 Adapter protein for pexophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway XP_002490691.1 2432174 D 644223 CDS PAS_chr1-4_0556 254567163 8197687 2436199..2437308 1 NC_012963.1 Replication factor C 2437308 8197687 PAS_chr1-4_0556 Pichia pastoris GS115 Replication factor C XP_002490692.1 2436199 D 644223 CDS PAS_chr1-4_0557 254567165 8197688 complement(2437344..2438012) 1 NC_012963.1 Mitochondrial ribosomal protein of the large subunit 2438012 8197688 PAS_chr1-4_0557 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002490693.1 2437344 R 644223 CDS PAS_chr1-4_0558 254567167 8197689 2438198..2439532 1 NC_012963.1 Mitochondrial phenylalanyl-tRNA synthetase alpha subunit, active as a monomer 2439532 8197689 PAS_chr1-4_0558 Pichia pastoris GS115 Mitochondrial phenylalanyl-tRNA synthetase alpha subunit, active as a monomer XP_002490694.1 2438198 D 644223 CDS PAS_chr1-4_0559 254567169 8197690 2439667..2441391 1 NC_012963.1 NADPH reductase 2441391 8197690 PAS_chr1-4_0559 Pichia pastoris GS115 NADPH reductase XP_002490695.1 2439667 D 644223 CDS PAS_chr1-4_0560 254567171 8197691 2441540..2441851 1 NC_012963.1 hypothetical protein 2441851 8197691 PAS_chr1-4_0560 Pichia pastoris GS115 hypothetical protein XP_002490696.1 2441540 D 644223 CDS PAS_chr1-4_0561 254567173 8197692 complement(2441920..2443410) 1 NC_012963.1 Hexokinase-2 2443410 8197692 PAS_chr1-4_0561 Pichia pastoris GS115 Hexokinase-2 XP_002490697.1 2441920 R 644223 CDS PAS_chr1-4_0562 254567175 8197693 2445569..2450212 1 NC_012963.1 Bile pigment transporter 2450212 8197693 PAS_chr1-4_0562 Pichia pastoris GS115 Bile pigment transporter XP_002490698.1 2445569 D 644223 CDS PAS_chr1-4_0563 254567177 8197694 complement(2450688..2452199) 1 NC_012963.1 Mitochondrial protein, forms a heterodimer complex with Mto1p 2452199 8197694 PAS_chr1-4_0563 Pichia pastoris GS115 Mitochondrial protein, forms a heterodimer complex with Mto1p XP_002490699.1 2450688 R 644223 CDS PAS_chr1-4_0564 254567179 8197695 join(2452430..2452969,2453035..2453283) 1 NC_012963.1 Iron-sulfur protein IND1 2453283 8197695 PAS_chr1-4_0564 Pichia pastoris GS115 Iron-sulfur protein IND1 XP_002490700.1 2452430 D 644223 CDS PAS_chr1-4_0565 254567181 8197696 2453475..2454359 1 NC_012963.1 hypothetical protein 2454359 8197696 PAS_chr1-4_0565 Pichia pastoris GS115 hypothetical protein XP_002490701.1 2453475 D 644223 CDS PAS_chr1-4_0566 254567183 8197697 complement(2454404..2455549) 1 NC_012963.1 Low-affinity cyclic AMP phosphodiesterase 2455549 8197697 PAS_chr1-4_0566 Pichia pastoris GS115 Low-affinity cyclic AMP phosphodiesterase XP_002490702.1 2454404 R 644223 CDS PAS_chr1-4_0567 254567185 8197698 complement(2455809..2456606) 1 NC_012963.1 Beta 7 subunit of the 20S proteasome 2456606 8197698 PAS_chr1-4_0567 Pichia pastoris GS115 Beta 7 subunit of the 20S proteasome XP_002490703.1 2455809 R 644223 CDS PAS_chr1-4_0568 254567187 8197699 join(2456775..2456785,2456836..2457511) 1 NC_012963.1 hypothetical protein 2457511 8197699 PAS_chr1-4_0568 Pichia pastoris GS115 hypothetical protein XP_002490704.1 2456775 D 644223 CDS PAS_chr1-4_0569 254567189 8197700 complement(2457612..2458553) 1 NC_012963.1 Primary component of eisosomes 2458553 8197700 PAS_chr1-4_0569 Pichia pastoris GS115 Primary component of eisosomes XP_002490705.1 2457612 R 644223 CDS PAS_chr1-4_0570 254567191 8197701 2460033..2461646 1 NC_012963.1 High-affinity glucose transporter of the major facilitator superfamily 2461646 8197701 PAS_chr1-4_0570 Pichia pastoris GS115 High-affinity glucose transporter of the major facilitator superfamily XP_002490706.1 2460033 D 644223 CDS PAS_chr1-4_0690 254567193 8197702 2461748..2462434 1 NC_012963.1 hypothetical protein 2462434 8197702 PAS_chr1-4_0690 Pichia pastoris GS115 hypothetical protein XP_002490707.1 2461748 D 644223 CDS PAS_chr1-4_0571 254567195 8197434 2462834..2474311 1 NC_012963.1 Transcription-associated protein 2474311 8197434 PAS_chr1-4_0571 Pichia pastoris GS115 Transcription-associated protein XP_002490708.1 2462834 D 644223 CDS PAS_chr1-4_0572 254567197 8197703 complement(2474359..2474964) 1 NC_012963.1 hypothetical protein 2474964 8197703 PAS_chr1-4_0572 Pichia pastoris GS115 hypothetical protein XP_002490709.1 2474359 R 644223 CDS PAS_chr1-4_0573 254567199 8197704 2475150..2476895 1 NC_012963.1 zinc finger protein 2476895 8197704 PAS_chr1-4_0573 Pichia pastoris GS115 zinc finger protein XP_002490710.1 2475150 D 644223 CDS PAS_chr1-4_0703 254567201 8197705 complement(2478163..2480007) 1 NC_012963.1 hypothetical protein 2480007 8197705 PAS_chr1-4_0703 Pichia pastoris GS115 hypothetical protein XP_002490711.1 2478163 R 644223 CDS PAS_chr1-4_0575 254567203 8197446 join(2480983..2481068,2481167..2481353) 1 NC_012963.1 NADH-ubiquinone oxidoreductase 2481353 8197446 PAS_chr1-4_0575 Pichia pastoris GS115 NADH-ubiquinone oxidoreductase XP_002490712.1 2480983 D 644223 CDS PAS_chr1-4_0576 254567205 8197706 2481583..2482632 1 NC_012963.1 hypothetical protein 2482632 8197706 PAS_chr1-4_0576 Pichia pastoris GS115 hypothetical protein XP_002490713.1 2481583 D 644223 CDS PAS_chr1-4_0577 254567207 8197707 complement(2482691..2483821) 1 NC_012963.1 Mitochondrial inner membrane insertase 2483821 8197707 PAS_chr1-4_0577 Pichia pastoris GS115 Mitochondrial inner membrane insertase XP_002490714.1 2482691 R 644223 CDS PAS_chr1-4_0578 254567209 8197708 2483989..2485515 1 NC_012963.1 hypothetical protein 2485515 8197708 PAS_chr1-4_0578 Pichia pastoris GS115 hypothetical protein XP_002490715.1 2483989 D 644223 CDS PAS_chr1-4_0579 254567211 8197709 2485646..2486965 1 NC_012963.1 hypothetical protein 2486965 8197709 PAS_chr1-4_0579 Pichia pastoris GS115 hypothetical protein XP_002490716.1 2485646 D 644223 CDS PAS_chr1-4_0580 254567213 8197710 2487032..2487520 1 NC_012963.1 hypothetical protein 2487520 8197710 PAS_chr1-4_0580 Pichia pastoris GS115 hypothetical protein XP_002490717.1 2487032 D 644223 CDS PAS_chr1-4_0581 254567215 8197711 complement(join(2489295..2489640,2489783..2489862)) 1 NC_012963.1 hypothetical protein 2489862 8197711 PAS_chr1-4_0581 Pichia pastoris GS115 hypothetical protein XP_002490718.1 2489295 R 644223 CDS PAS_chr1-4_0582 254567217 8197712 complement(2491328..2492572) 1 NC_012963.1 hypothetical protein 2492572 8197712 PAS_chr1-4_0582 Pichia pastoris GS115 hypothetical protein XP_002490719.1 2491328 R 644223 CDS PAS_chr1-4_0583 254567219 8197713 complement(2493825..2494031) 1 NC_012963.1 hypothetical protein 2494031 8197713 PAS_chr1-4_0583 Pichia pastoris GS115 hypothetical protein XP_002490720.1 2493825 R 644223 CDS PAS_chr1-4_0584 254567221 8197714 2494685..2496100 1 NC_012963.1 Lectin-like protein with similarity to Flo1p, thought to be expressed and involved in flocculation 2496100 8197714 PAS_chr1-4_0584 Pichia pastoris GS115 Lectin-like protein with similarity to Flo1p, thought to be expressed and involved in flocculation XP_002490721.1 2494685 D 644223 CDS PAS_chr1-4_0585 254567223 8197715 2496675..2498450 1 NC_012963.1 Ubiquitin-specific protease that interacts with Bre5p 2498450 8197715 PAS_chr1-4_0585 Pichia pastoris GS115 Ubiquitin-specific protease that interacts with Bre5p XP_002490722.1 2496675 D 644223 CDS PAS_chr1-4_0586 254567225 8197716 complement(2498656..2499063) 1 NC_012963.1 hypothetical protein 2499063 8197716 PAS_chr1-4_0586 Pichia pastoris GS115 hypothetical protein XP_002490723.1 2498656 R 644223 CDS PAS_chr1-4_0587 254567227 8197717 complement(2499921..2500931) 1 NC_012963.1 hypothetical protein 2500931 8197717 PAS_chr1-4_0587 Pichia pastoris GS115 hypothetical protein XP_002490724.1 2499921 R 644223 CDS PAS_chr1-4_0691 254567229 8197718 complement(join(2501521..2502082,2502133..2503112)) 1 NC_012963.1 hypothetical protein 2503112 8197718 PAS_chr1-4_0691 Pichia pastoris GS115 hypothetical protein XP_002490725.1 2501521 R 644223 CDS PAS_chr1-4_0588 254567231 8197435 complement(join(2504971..2505478,2505856..2505890)) 1 NC_012963.1 hypothetical protein 2505890 8197435 PAS_chr1-4_0588 Pichia pastoris GS115 hypothetical protein XP_002490726.1 2504971 R 644223 CDS PAS_chr1-4_0589 254567233 8197719 2506190..2506981 1 NC_012963.1 Protein component of the small (40S) subunit, essential for control of translational accuracy 2506981 8197719 PAS_chr1-4_0589 Pichia pastoris GS115 Protein component of the small (40S) subunit, essential for control of translational accuracy XP_002490727.1 2506190 D 644223 CDS PAS_chr1-4_0590 254567235 8197720 complement(2507045..2508487) 1 NC_012963.1 Nuclear polyadenylated RNA-binding protein 2508487 8197720 PAS_chr1-4_0590 Pichia pastoris GS115 Nuclear polyadenylated RNA-binding protein XP_002490728.1 2507045 R 644223 CDS PAS_chr1-4_0591 254567237 8197721 complement(2508638..2511745) 1 NC_012963.1 Protein required for ubiquinone (coenzyme Q) biosynthesis and for respiratory growth 2511745 8197721 PAS_chr1-4_0591 Pichia pastoris GS115 Protein required for ubiquinone (coenzyme Q) biosynthesis and for respiratory growth XP_002490729.1 2508638 R 644223 CDS PAS_chr1-4_0692 254567239 8197722 complement(2511896..2513659) 1 NC_012963.1 hypothetical protein 2513659 8197722 PAS_chr1-4_0692 Pichia pastoris GS115 hypothetical protein XP_002490730.1 2511896 R 644223 CDS PAS_chr1-4_0592 254567241 8197436 2513821..2516082 1 NC_012963.1 RNA helicase in the DEAH-box family 2516082 8197436 PAS_chr1-4_0592 Pichia pastoris GS115 RNA helicase in the DEAH-box family XP_002490731.1 2513821 D 644223 CDS PAS_chr1-4_0593 254567243 8197723 complement(2516145..2517242) 1 NC_012963.1 E1 beta subunit of the pyruvate dehydrogenase (PDH) complex 2517242 8197723 PAS_chr1-4_0593 Pichia pastoris GS115 E1 beta subunit of the pyruvate dehydrogenase (PDH) complex XP_002490732.1 2516145 R 644223 CDS PAS_chr1-4_0594 254567245 8197724 complement(join(2517564..2519466,2519573..2519622)) 1 NC_012963.1 General negative regulator of transcription subunit 4 2519622 8197724 PAS_chr1-4_0594 Pichia pastoris GS115 General negative regulator of transcription subunit 4 XP_002490733.1 2517564 R 644223 CDS PAS_chr1-4_0595 254567247 8197725 2519824..2523057 1 NC_012963.1 Karyopherin, responsible for nuclear import of Spt15p, histones H2A and H2B, and Nap1p 2523057 8197725 PAS_chr1-4_0595 Pichia pastoris GS115 Karyopherin, responsible for nuclear import of Spt15p, histones H2A and H2B, and Nap1p XP_002490734.1 2519824 D 644223 CDS PAS_chr1-4_0596 254567249 8197726 complement(join(2523078..2523543,2523659..2524623)) 1 NC_012963.1 Subunit of the RNA polymerase II-associated Paf1 complex 2524623 8197726 PAS_chr1-4_0596 Pichia pastoris GS115 Subunit of the RNA polymerase II-associated Paf1 complex XP_002490735.1 2523078 R 644223 CDS PAS_chr1-4_0597 254567251 8197727 2524837..2526714 1 NC_012963.1 Cytosolic protein required for sporulation 2526714 8197727 PAS_chr1-4_0597 Pichia pastoris GS115 Cytosolic protein required for sporulation XP_002490736.1 2524837 D 644223 CDS PAS_chr1-4_0598 254567253 8197728 complement(2526728..2528890) 1 NC_012963.1 Glutamyl-tRNA synthetase, cytoplasmic 2528890 8197728 PAS_chr1-4_0598 Pichia pastoris GS115 Glutamyl-tRNA synthetase, cytoplasmic XP_002490737.1 2526728 R 644223 CDS PAS_chr1-4_0599 254567255 8197729 complement(2529111..2530070) 1 NC_012963.1 Essential nuclear envelope integral membrane protein required for nuclear transport 2530070 8197729 PAS_chr1-4_0599 Pichia pastoris GS115 Essential nuclear envelope integral membrane protein required for nuclear transport XP_002490738.1 2529111 R 644223 CDS PAS_chr1-4_0600 254567257 8197730 join(2530164..2530308,2530381..2530574) 1 NC_012963.1 hypothetical protein 2530574 8197730 PAS_chr1-4_0600 Pichia pastoris GS115 hypothetical protein XP_002490739.1 2530164 D 644223 CDS PAS_chr1-4_0601 254567259 8197731 complement(2530632..2532317) 1 NC_012963.1 Plasma membrane arginine permease, requires phosphatidyl ethanolamine (PE) for localization 2532317 8197731 PAS_chr1-4_0601 Pichia pastoris GS115 Plasma membrane arginine permease, requires phosphatidyl ethanolamine (PE) for localization XP_002490740.1 2530632 R 644223 CDS PAS_chr1-4_0602 254567261 8197732 join(2533072..2533088,2533171..2533885) 1 NC_012963.1 N(6)-adenine-specific DNA methyltransferase 2533885 8197732 PAS_chr1-4_0602 Pichia pastoris GS115 N(6)-adenine-specific DNA methyltransferase XP_002490741.1 2533072 D 644223 CDS PAS_chr1-4_0603 254567263 8197733 2534004..2535455 1 NC_012963.1 hypothetical protein 2535455 8197733 PAS_chr1-4_0603 Pichia pastoris GS115 hypothetical protein XP_002490742.1 2534004 D 644223 CDS PAS_chr1-4_0604 254567265 8197734 2535553..2536602 1 NC_012963.1 C-3 sterol dehydrogenase 2536602 8197734 PAS_chr1-4_0604 Pichia pastoris GS115 C-3 sterol dehydrogenase XP_002490743.1 2535553 D 644223 CDS PAS_chr1-4_0605 254567267 8197735 complement(2536691..2537404) 1 NC_012963.1 hypothetical protein 2537404 8197735 PAS_chr1-4_0605 Pichia pastoris GS115 hypothetical protein XP_002490744.1 2536691 R 644223 CDS PAS_chr1-4_0606 254567269 8197736 complement(2537542..2541597) 1 NC_012963.1 Membrane-associated protein 2541597 8197736 PAS_chr1-4_0606 Pichia pastoris GS115 Membrane-associated protein XP_002490745.1 2537542 R 644223 CDS PAS_chr1-4_0607 254567271 8197737 2541745..2542986 1 NC_012963.1 COMPASS component SWD1 2542986 8197737 PAS_chr1-4_0607 Pichia pastoris GS115 COMPASS component SWD1 XP_002490746.1 2541745 D 644223 CDS PAS_chr1-4_0608 254567273 8197738 complement(2542997..2544445) 1 NC_012963.1 Aromatic aminotransferase I, expression is regulated by general control of amino acid biosynthesis 2544445 8197738 PAS_chr1-4_0608 Pichia pastoris GS115 Aromatic aminotransferase I, expression is regulated by general control of amino acid biosynthesis XP_002490747.1 2542997 R 644223 CDS PAS_chr1-4_0609 254567275 8197739 complement(2544555..2546927) 1 NC_012963.1 Cullin, structural protein of SCF complexes 2546927 8197739 PAS_chr1-4_0609 Pichia pastoris GS115 Cullin, structural protein of SCF complexes XP_002490748.1 2544555 R 644223 CDS PAS_chr1-4_0610 254567277 8197818 2547061..2547423 1 NC_012963.1 hypothetical protein 2547423 8197818 PAS_chr1-4_0610 Pichia pastoris GS115 hypothetical protein XP_002490749.1 2547061 D 644223 CDS PAS_chr1-4_0611 254567279 8197819 2548256..2549785 1 NC_012963.1 Vacuolar aminopeptidase Y, processed to mature form by Prb1p 2549785 8197819 PAS_chr1-4_0611 Pichia pastoris GS115 Vacuolar aminopeptidase Y, processed to mature form by Prb1p XP_002490750.1 2548256 D 644223 CDS PAS_chr1-4_0612 254567281 8197820 2550641..2552152 1 NC_012963.1 hypothetical protein 2552152 8197820 PAS_chr1-4_0612 Pichia pastoris GS115 hypothetical protein XP_002490751.1 2550641 D 644223 CDS PAS_chr1-4_0613 254567283 8197821 complement(2552154..2553944) 1 NC_012963.1 Probable transporter SEO1 2553944 8197821 PAS_chr1-4_0613 Pichia pastoris GS115 Probable transporter SEO1 XP_002490752.1 2552154 R 644223 CDS PAS_chr1-4_0614 254567285 8197822 2554895..2555197 1 NC_012963.1 Core Sm protein Sm D3 2555197 8197822 PAS_chr1-4_0614 Pichia pastoris GS115 Core Sm protein Sm D3 XP_002490753.1 2554895 D 644223 CDS PAS_chr1-4_0615 254567287 8197823 2555770..2556720 1 NC_012963.1 mitochondrial phosphate carrier protein 2556720 8197823 PAS_chr1-4_0615 Pichia pastoris GS115 mitochondrial phosphate carrier protein XP_002490754.1 2555770 D 644223 CDS PAS_chr1-4_0616 254567289 8197824 complement(2556829..2557512) 1 NC_012963.1 hypothetical protein 2557512 8197824 PAS_chr1-4_0616 Pichia pastoris GS115 hypothetical protein XP_002490755.1 2556829 R 644223 CDS PAS_chr1-4_0617 254567291 8197825 complement(2557770..2559593) 1 NC_012963.1 Phosphatidylinositol (PI) phosphatase 2559593 8197825 PAS_chr1-4_0617 Pichia pastoris GS115 Phosphatidylinositol (PI) phosphatase XP_002490756.1 2557770 R 644223 CDS PAS_chr1-4_0618 254567293 8197826 2559718..2561850 1 NC_012963.1 WD repeat protein required for ubiquitin-mediated protein degradation 2561850 8197826 PAS_chr1-4_0618 Pichia pastoris GS115 WD repeat protein required for ubiquitin-mediated protein degradation XP_002490757.1 2559718 D 644223 CDS PAS_chr1-4_0619 254567295 8197827 2562106..2566659 1 NC_012963.1 Metal resistance protein YCF1 2566659 8197827 PAS_chr1-4_0619 Pichia pastoris GS115 Metal resistance protein YCF1 XP_002490758.1 2562106 D 644223 CDS PAS_chr1-4_0620 254567297 8197828 complement(2566685..2568238) 1 NC_012963.1 hypothetical protein 2568238 8197828 PAS_chr1-4_0620 Pichia pastoris GS115 hypothetical protein XP_002490759.1 2566685 R 644223 CDS PAS_chr1-4_0696 254567299 8197829 complement(2568910..2570694) 1 NC_012963.1 hypothetical protein 2570694 8197829 PAS_chr1-4_0696 Pichia pastoris GS115 hypothetical protein XP_002490760.1 2568910 R 644223 CDS PAS_chr1-4_0621 254567301 8197440 complement(2570835..2572652) 1 NC_012963.1 Major facilitator superfamily 2572652 8197440 PAS_chr1-4_0621 Pichia pastoris GS115 Major facilitator superfamily XP_002490761.1 2570835 R 644223 CDS PAS_chr1-4_0622 254567303 8197830 2573124..2575745 1 NC_012963.1 hypothetical protein 2575745 8197830 PAS_chr1-4_0622 Pichia pastoris GS115 hypothetical protein XP_002490762.1 2573124 D 644223 CDS PAS_chr1-4_0623 254567305 8197831 complement(2575815..2577866) 1 NC_012963.1 Actin assembly factor, activates the Arp2/3 protein complex that nucleates branched actin filaments 2577866 8197831 PAS_chr1-4_0623 Pichia pastoris GS115 Actin assembly factor, activates the Arp2/3 protein complex that nucleates branched actin filaments XP_002490763.1 2575815 R 644223 CDS PAS_chr1-4_0624 254567307 8197832 complement(2578090..2579100) 1 NC_012963.1 hypothetical protein 2579100 8197832 PAS_chr1-4_0624 Pichia pastoris GS115 hypothetical protein XP_002490764.1 2578090 R 644223 CDS PAS_chr1-4_0625 254567309 8197833 complement(2579605..2580999) 1 NC_012963.1 hypothetical protein 2580999 8197833 PAS_chr1-4_0625 Pichia pastoris GS115 hypothetical protein XP_002490765.1 2579605 R 644223 CDS PAS_chr1-4_0626 254567311 8197834 2581218..2581868 1 NC_012963.1 GTP-binding protein YPT10 2581868 8197834 PAS_chr1-4_0626 Pichia pastoris GS115 GTP-binding protein YPT10 XP_002490766.1 2581218 D 644223 CDS PAS_chr1-4_0627 254567313 8197835 complement(2581855..2583504) 1 NC_012963.1 Putative serine/threonine kinase 2583504 8197835 PAS_chr1-4_0627 Pichia pastoris GS115 Putative serine/threonine kinase XP_002490767.1 2581855 R 644223 CDS PAS_chr1-4_0628 254567315 8197836 join(2583818..2584261,2584309..2584851) 1 NC_012963.1 hypothetical protein 2584851 8197836 PAS_chr1-4_0628 Pichia pastoris GS115 hypothetical protein XP_002490768.1 2583818 D 644223 CDS PAS_chr1-4_0629 254567317 8197837 complement(2584924..2586363) 1 NC_012963.1 Subunit of the Ssh1 translocon complex 2586363 8197837 PAS_chr1-4_0629 Pichia pastoris GS115 Subunit of the Ssh1 translocon complex XP_002490769.1 2584924 R 644223 CDS PAS_chr1-4_0630 254567319 8197838 2586758..2587471 1 NC_012963.1 Putative S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family 2587471 8197838 PAS_chr1-4_0630 Pichia pastoris GS115 Putative S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family XP_002490770.1 2586758 D 644223 CDS PAS_chr1-4_0704 254567321 8197839 2587820..2588443 1 NC_012963.1 hypothetical protein 2588443 8197839 PAS_chr1-4_0704 Pichia pastoris GS115 hypothetical protein XP_002490771.1 2587820 D 644223 CDS PAS_chr1-4_0631 254567323 8197447 complement(2588465..2591563) 1 NC_012963.1 hypothetical protein 2591563 8197447 PAS_chr1-4_0631 Pichia pastoris GS115 hypothetical protein XP_002490772.1 2588465 R 644223 CDS PAS_chr1-4_0632 254567325 8197840 2592292..2595237 1 NC_012963.1 C-1-tetrahydrofolate synthase, mitochondrial 2595237 8197840 PAS_chr1-4_0632 Pichia pastoris GS115 C-1-tetrahydrofolate synthase, mitochondrial XP_002490773.1 2592292 D 644223 CDS PAS_chr1-4_0633 254567327 8197841 complement(2595585..2596706) 1 NC_012963.1 5' to 3' exonuclease, 5' flap endonuclease 2596706 8197841 PAS_chr1-4_0633 Pichia pastoris GS115 5' to 3' exonuclease, 5' flap endonuclease XP_002490774.1 2595585 R 644223 CDS PAS_chr1-4_0634 254567329 8197842 2596878..2599673 1 NC_012963.1 Protein that forms heterodimers with Msh3p and Msh6p 2599673 8197842 PAS_chr1-4_0634 Pichia pastoris GS115 Protein that forms heterodimers with Msh3p and Msh6p XP_002490775.1 2596878 D 644223 CDS PAS_chr1-4_0635 254567331 8197843 complement(join(2599723..2599731,2599787..2600392)) 1 NC_012963.1 hypothetical protein 2600392 8197843 PAS_chr1-4_0635 Pichia pastoris GS115 hypothetical protein XP_002490776.1 2599723 R 644223 CDS PAS_chr1-4_0636 254567333 8197844 complement(2600641..2602296) 1 NC_012963.1 Major facilitator superfamily 2602296 8197844 PAS_chr1-4_0636 Pichia pastoris GS115 Major facilitator superfamily XP_002490777.1 2600641 R 644223 CDS PAS_chr1-4_0637 254567335 8197845 2603381..2604253 1 NC_012963.1 Protein kti12 2604253 8197845 PAS_chr1-4_0637 Pichia pastoris GS115 Protein kti12 XP_002490778.1 2603381 D 644223 CDS PAS_chr1-4_0638 254567337 8197846 complement(2604270..2606174) 1 NC_012963.1 Mitochondrial protein required for the stability of Oli1p mRNA and for the Oli1p ring formation 2606174 8197846 PAS_chr1-4_0638 Pichia pastoris GS115 Mitochondrial protein required for the stability of Oli1p mRNA and for the Oli1p ring formation XP_002490779.1 2604270 R 644223 CDS PAS_chr1-4_0639 254567339 8197847 2606333..2607013 1 NC_012963.1 transcription factor 2607013 8197847 PAS_chr1-4_0639 Pichia pastoris GS115 transcription factor XP_002490780.1 2606333 D 644223 CDS PAS_chr1-4_0640 254567341 8197848 complement(2607038..2608531) 1 NC_012963.1 U3 small nucleolar RNA-associated protein 2608531 8197848 PAS_chr1-4_0640 Pichia pastoris GS115 U3 small nucleolar RNA-associated protein XP_002490781.1 2607038 R 644223 CDS PAS_chr1-4_0641 254567343 8197849 join(2608861..2608876,2608940..2610639) 1 NC_012963.1 Actin-interacting protein 2610639 8197849 PAS_chr1-4_0641 Pichia pastoris GS115 Actin-interacting protein XP_002490782.1 2608861 D 644223 CDS PAS_chr1-4_0642 254567345 8197850 complement(2610658..2611398) 1 NC_012963.1 U3 small nucleolar RNA-associated protein 2611398 8197850 PAS_chr1-4_0642 Pichia pastoris GS115 U3 small nucleolar RNA-associated protein XP_002490783.1 2610658 R 644223 CDS PAS_chr1-4_0643 254567347 8197851 2611549..2612355 1 NC_012963.1 hypothetical protein 2612355 8197851 PAS_chr1-4_0643 Pichia pastoris GS115 hypothetical protein XP_002490784.1 2611549 D 644223 CDS PAS_chr1-4_0644 254567349 8197852 complement(2612390..2614450) 1 NC_012963.1 Dynamin-like GTPase required for vacuolar sorting 2614450 8197852 PAS_chr1-4_0644 Pichia pastoris GS115 Dynamin-like GTPase required for vacuolar sorting XP_002490785.1 2612390 R 644223 CDS PAS_chr1-4_0701 254567351 8197853 2615678..2616730 1 NC_012963.1 hypothetical protein 2616730 8197853 PAS_chr1-4_0701 Pichia pastoris GS115 hypothetical protein XP_002490786.1 2615678 D 644223 CDS PAS_chr1-4_0645 254567353 8197445 2616966..2618621 1 NC_012963.1 Poly(A) polymerase 2618621 8197445 PAS_chr1-4_0645 Pichia pastoris GS115 Poly(A) polymerase XP_002490787.1 2616966 D 644223 CDS PAS_chr1-4_0646 254567355 8197854 2618824..2620122 1 NC_012963.1 Oxysterol-binding protein 2620122 8197854 PAS_chr1-4_0646 Pichia pastoris GS115 Oxysterol-binding protein XP_002490788.1 2618824 D 644223 CDS PAS_chr1-4_0647 254567357 8197855 complement(2620165..2621121) 1 NC_012963.1 hypothetical protein 2621121 8197855 PAS_chr1-4_0647 Pichia pastoris GS115 hypothetical protein XP_002490789.1 2620165 R 644223 CDS PAS_chr1-4_0648 254567359 8197856 join(2621457..2621627,2621776..2622861) 1 NC_012963.1 Sorting and Assembly Machinery complex 2622861 8197856 PAS_chr1-4_0648 Pichia pastoris GS115 Sorting and Assembly Machinery complex XP_002490790.1 2621457 D 644223 CDS PAS_chr1-4_0649 254567361 8197857 complement(2622934..2625453) 1 NC_012963.1 Mitochondrial respiratory chain complexes assembly protein RCA1 2625453 8197857 PAS_chr1-4_0649 Pichia pastoris GS115 Mitochondrial respiratory chain complexes assembly protein RCA1 XP_002490791.1 2622934 R 644223 CDS PAS_chr1-4_0650 254567363 8197858 complement(2625616..2626977) 1 NC_012963.1 Chromatin structure-remodeling complex protein RSC7 2626977 8197858 PAS_chr1-4_0650 Pichia pastoris GS115 Chromatin structure-remodeling complex protein RSC7 XP_002490792.1 2625616 R 644223 CDS PAS_chr1-4_0651 254567365 8197859 2627420..2629354 1 NC_012963.1 Subunit of SAGA histone acetyltransferase complex 2629354 8197859 PAS_chr1-4_0651 Pichia pastoris GS115 Subunit of SAGA histone acetyltransferase complex XP_002490793.1 2627420 D 644223 CDS PAS_c121_0002 254567367 8197860 complement(join(2629401..2630770,2630828..2630864)) 1 NC_012963.1 hypothetical protein 2630864 8197860 PAS_c121_0002 Pichia pastoris GS115 hypothetical protein XP_002490794.1 2629401 R 644223 CDS PAS_c121_0003 254567369 8197502 join(2631029..2631051,2631100..2632378) 1 NC_012963.1 hypothetical protein 2632378 8197502 PAS_c121_0003 Pichia pastoris GS115 hypothetical protein XP_002490795.1 2631029 D 644223 CDS PAS_c121_0004 254567371 8197503 2632849..2636583 1 NC_012963.1 hypothetical protein 2636583 8197503 PAS_c121_0004 Pichia pastoris GS115 hypothetical protein XP_002490796.1 2632849 D 644223 CDS PAS_c121_0018 254567373 8197504 complement(2636612..2637277) 1 NC_012963.1 hypothetical protein 2637277 8197504 PAS_c121_0018 Pichia pastoris GS115 hypothetical protein XP_002490797.1 2636612 R 644223 CDS PAS_c121_0005 254567375 8197518 complement(2637406..2638638) 1 NC_012963.1 hypothetical protein 2638638 8197518 PAS_c121_0005 Pichia pastoris GS115 hypothetical protein XP_002490798.1 2637406 R 644223 CDS PAS_c121_0006 254567377 8197505 2639026..2639358 1 NC_012963.1 hypothetical protein 2639358 8197505 PAS_c121_0006 Pichia pastoris GS115 hypothetical protein XP_002490799.1 2639026 D 644223 CDS PAS_c121_0007 254567379 8197506 2639704..2644320 1 NC_012963.1 hypothetical protein 2644320 8197506 PAS_c121_0007 Pichia pastoris GS115 hypothetical protein XP_002490800.1 2639704 D 644223 CDS PAS_c121_0008 254567381 8197507 complement(join(2644358..2644882,2644976..2646789,2646887..2646914)) 1 NC_012963.1 hypothetical protein 2646914 8197507 PAS_c121_0008 Pichia pastoris GS115 hypothetical protein XP_002490801.1 2644358 R 644223 CDS PAS_c121_0009 254567383 8197508 2647156..2649561 1 NC_012963.1 hypothetical protein 2649561 8197508 PAS_c121_0009 Pichia pastoris GS115 hypothetical protein XP_002490802.1 2647156 D 644223 CDS PAS_c121_0010 254567385 8197509 complement(2649625..2650686) 1 NC_012963.1 hypothetical protein 2650686 8197509 PAS_c121_0010 Pichia pastoris GS115 hypothetical protein XP_002490803.1 2649625 R 644223 CDS PAS_c121_0011 254567387 8197510 complement(2650891..2651409) 1 NC_012963.1 hypothetical protein 2651409 8197510 PAS_c121_0011 Pichia pastoris GS115 hypothetical protein XP_002490804.1 2650891 R 644223 CDS PAS_c121_0012 254567389 8197511 complement(2651525..2652265) 1 NC_012963.1 hypothetical protein 2652265 8197511 PAS_c121_0012 Pichia pastoris GS115 hypothetical protein XP_002490805.1 2651525 R 644223 CDS PAS_c121_0019 254567391 8197512 2652484..2653221 1 NC_012963.1 hypothetical protein 2653221 8197512 PAS_c121_0019 Pichia pastoris GS115 hypothetical protein XP_002490806.1 2652484 D 644223 CDS PAS_c121_0013 254567393 8197519 complement(2653233..2654135) 1 NC_012963.1 hypothetical protein 2654135 8197519 PAS_c121_0013 Pichia pastoris GS115 hypothetical protein XP_002490807.1 2653233 R 644223 CDS PAS_c121_0014 254567395 8197513 2654608..2655093 1 NC_012963.1 hypothetical protein 2655093 8197513 PAS_c121_0014 Pichia pastoris GS115 hypothetical protein XP_002490808.1 2654608 D 644223 CDS PAS_c121_0015 254567397 8197514 complement(2655371..2658595) 1 NC_012963.1 hypothetical protein 2658595 8197514 PAS_c121_0015 Pichia pastoris GS115 hypothetical protein XP_002490809.1 2655371 R 644223 CDS PAS_c121_0016 254567399 8197515 complement(join(2658771..2658841,2658970..2659198)) 1 NC_012963.1 hypothetical protein 2659198 8197515 PAS_c121_0016 Pichia pastoris GS115 hypothetical protein XP_002490810.1 2658771 R 644223 CDS PAS_c121_0017 254567401 8197516 join(2659738..2660076,2660210..2660245) 1 NC_012963.1 hypothetical protein 2660245 8197516 PAS_c121_0017 Pichia pastoris GS115 hypothetical protein XP_002490811.1 2659738 D 644223 CDS PAS_FragB_0071 254567403 8197517 complement(2661852..2663618) 1 NC_012963.1 hypothetical protein 2663618 8197517 PAS_FragB_0071 Pichia pastoris GS115 hypothetical protein XP_002490812.1 2661852 R 644223 CDS PAS_FragB_0002 254567405 8196512 complement(2663915..2672944) 1 NC_012963.1 Protein CSF1 2672944 8196512 PAS_FragB_0002 Pichia pastoris GS115 Protein CSF1 XP_002490813.1 2663915 R 644223 CDS PAS_FragB_0003 254567407 8197448 complement(2673205..2674467) 1 NC_012963.1 Rho GTPase activating protein 2674467 8197448 PAS_FragB_0003 Pichia pastoris GS115 Rho GTPase activating protein XP_002490814.1 2673205 R 644223 CDS PAS_FragB_0004 254567409 8197449 2675109..2675342 1 NC_012963.1 Small nuclear ribonucleoprotein G 2675342 8197449 PAS_FragB_0004 Pichia pastoris GS115 Small nuclear ribonucleoprotein G XP_002490815.1 2675109 D 644223 CDS PAS_FragB_0005 254567411 8197450 complement(2675431..2677731) 1 NC_012963.1 Ino eighty subunit 1 2677731 8197450 PAS_FragB_0005 Pichia pastoris GS115 Ino eighty subunit 1 XP_002490816.1 2675431 R 644223 CDS PAS_FragB_0006 254567413 8197451 2678067..2678669 1 NC_012963.1 Synaptobrevin homolog YKT6 2678669 8197451 PAS_FragB_0006 Pichia pastoris GS115 Synaptobrevin homolog YKT6 XP_002490817.1 2678067 D 644223 CDS PAS_FragB_0007 254567415 8197452 2679243..2680628 1 NC_012963.1 Protein VTS1 2680628 8197452 PAS_FragB_0007 Pichia pastoris GS115 Protein VTS1 XP_002490818.1 2679243 D 644223 CDS PAS_FragB_0008 254567417 8197453 2680878..2682560 1 NC_012963.1 cyclic AMP phosphodiesterase 2682560 8197453 PAS_FragB_0008 Pichia pastoris GS115 cyclic AMP phosphodiesterase XP_002490819.1 2680878 D 644223 CDS PAS_FragB_0009 254567419 8197454 2682761..2683288 1 NC_012963.1 H subunit of the mitochondrial glycine decarboxylase complex 2683288 8197454 PAS_FragB_0009 Pichia pastoris GS115 H subunit of the mitochondrial glycine decarboxylase complex XP_002490820.1 2682761 D 644223 CDS PAS_FragB_0010 254567421 8197455 complement(2683342..2683662) 1 NC_012963.1 hypothetical protein 2683662 8197455 PAS_FragB_0010 Pichia pastoris GS115 hypothetical protein XP_002490821.1 2683342 R 644223 CDS PAS_FragB_0011 254567423 8197456 2683881..2684213 1 NC_012963.1 Synaptobrevin homolog 2 2684213 8197456 PAS_FragB_0011 Pichia pastoris GS115 Synaptobrevin homolog 2 XP_002490822.1 2683881 D 644223 CDS PAS_FragB_0012 254567425 8197457 complement(2684345..2689024) 1 NC_012963.1 Myosin-2 2689024 8197457 PAS_FragB_0012 Pichia pastoris GS115 Myosin-2 XP_002490823.1 2684345 R 644223 CDS PAS_FragB_0072 254567427 8197458 2689438..2690382 1 NC_012963.1 hypothetical protein 2690382 8197458 PAS_FragB_0072 Pichia pastoris GS115 hypothetical protein XP_002490824.1 2689438 D 644223 CDS PAS_FragB_0013 254567429 8196513 2691322..2693625 1 NC_012963.1 Leucine-rich repeat-containing protein 2693625 8196513 PAS_FragB_0013 Pichia pastoris GS115 Leucine-rich repeat-containing protein XP_002490825.1 2691322 D 644223 CDS PAS_FragB_0014 254567431 8197459 complement(join(2693651..2694500,2694550..2694629)) 1 NC_012963.1 Mitochondrial DNA replication protein 2694629 8197459 PAS_FragB_0014 Pichia pastoris GS115 Mitochondrial DNA replication protein XP_002490826.1 2693651 R 644223 CDS PAS_FragB_0015 254567433 8197460 complement(2695061..2695546) 1 NC_012963.1 hypothetical protein 2695546 8197460 PAS_FragB_0015 Pichia pastoris GS115 hypothetical protein XP_002490827.1 2695061 R 644223 CDS PAS_FragB_0018 254567435 8197461 complement(2697287..2697607) 1 NC_012963.1 hypothetical protein 2697607 8197461 PAS_FragB_0018 Pichia pastoris GS115 hypothetical protein XP_002490828.1 2697287 R 644223 CDS PAS_FragB_0019 254567437 8197462 2697827..2699050 1 NC_012963.1 tRNA-dihydrouridine synthase 1 2699050 8197462 PAS_FragB_0019 Pichia pastoris GS115 tRNA-dihydrouridine synthase 1 XP_002490829.1 2697827 D 644223 CDS PAS_FragB_0020 254567439 8197463 2699303..2701585 1 NC_012963.1 Vacuolar protein sorting-associated protein 70 2701585 8197463 PAS_FragB_0020 Pichia pastoris GS115 Vacuolar protein sorting-associated protein 70 XP_002490830.1 2699303 D 644223 CDS PAS_FragB_0073 254567441 8197464 2702416..2703705 1 NC_012963.1 hypothetical protein 2703705 8197464 PAS_FragB_0073 Pichia pastoris GS115 hypothetical protein XP_002490831.1 2702416 D 644223 CDS PAS_FragB_0022 254567443 8196514 complement(2703743..2704561) 1 NC_012963.1 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial 2704561 8196514 PAS_FragB_0022 Pichia pastoris GS115 Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial XP_002490832.1 2703743 R 644223 CDS PAS_FragB_0023 254567445 8197465 2705358..2706878 1 NC_012963.1 Vitamin H transporter 1 2706878 8197465 PAS_FragB_0023 Pichia pastoris GS115 Vitamin H transporter 1 XP_002490833.1 2705358 D 644223 CDS PAS_FragB_0024 254567447 8197466 complement(2706921..2707958) 1 NC_012963.1 hypothetical protein 2707958 8197466 PAS_FragB_0024 Pichia pastoris GS115 hypothetical protein XP_002490834.1 2706921 R 644223 CDS PAS_FragB_0025 254567449 8197467 2708235..2709152 1 NC_012963.1 Phytanoyl-CoA dioxygenase domain-containing protein 2709152 8197467 PAS_FragB_0025 Pichia pastoris GS115 Phytanoyl-CoA dioxygenase domain-containing protein XP_002490835.1 2708235 D 644223 CDS PAS_FragB_0026 254567451 8197468 complement(2709154..2709699) 1 NC_012963.1 hypothetical protein 2709699 8197468 PAS_FragB_0026 Pichia pastoris GS115 hypothetical protein XP_002490836.1 2709154 R 644223 CDS PAS_FragB_0027 254567453 8197469 2710057..2712759 1 NC_012963.1 AP-3 complex subunit delta 2712759 8197469 PAS_FragB_0027 Pichia pastoris GS115 AP-3 complex subunit delta XP_002490837.1 2710057 D 644223 CDS PAS_FragB_0028 254567455 8197470 2712901..2714400 1 NC_012963.1 hypothetical protein 2714400 8197470 PAS_FragB_0028 Pichia pastoris GS115 hypothetical protein XP_002490838.1 2712901 D 644223 CDS PAS_FragB_0029 254567457 8197471 complement(2714473..2714859) 1 NC_012963.1 hypothetical protein 2714859 8197471 PAS_FragB_0029 Pichia pastoris GS115 hypothetical protein XP_002490839.1 2714473 R 644223 CDS PAS_FragB_0030 254567459 8197472 2714994..2715644 1 NC_012963.1 hypothetical protein 2715644 8197472 PAS_FragB_0030 Pichia pastoris GS115 hypothetical protein XP_002490840.1 2714994 D 644223 CDS PAS_FragB_0031 254567461 8197473 complement(join(2715705..2716360,2716683..2717223)) 1 NC_012963.1 hypothetical protein 2717223 8197473 PAS_FragB_0031 Pichia pastoris GS115 hypothetical protein XP_002490841.1 2715705 R 644223 CDS PAS_FragB_0032 254567463 8197474 complement(2717350..2718543) 1 NC_012963.1 hypothetical protein 2718543 8197474 PAS_FragB_0032 Pichia pastoris GS115 hypothetical protein XP_002490842.1 2717350 R 644223 CDS PAS_FragB_0033 254567465 8197475 join(2719186..2719225,2719282..2719475) 1 NC_012963.1 hypothetical protein 2719475 8197475 PAS_FragB_0033 Pichia pastoris GS115 hypothetical protein XP_002490843.1 2719186 D 644223 CDS PAS_FragB_0034 254567467 8197476 2719999..2720682 1 NC_012963.1 hypothetical protein 2720682 8197476 PAS_FragB_0034 Pichia pastoris GS115 hypothetical protein XP_002490844.1 2719999 D 644223 CDS PAS_FragB_0035 254567469 8197477 complement(2720725..2721294) 1 NC_012963.1 hypothetical protein 2721294 8197477 PAS_FragB_0035 Pichia pastoris GS115 hypothetical protein XP_002490845.1 2720725 R 644223 CDS PAS_FragB_0036 254567471 8197478 complement(2721521..2721826) 1 NC_012963.1 60S ribosomal protein L36 2721826 8197478 PAS_FragB_0036 Pichia pastoris GS115 60S ribosomal protein L36 XP_002490846.1 2721521 R 644223 CDS PAS_FragB_0037 254567473 8197479 complement(2722329..2723075) 1 NC_012963.1 54S ribosomal protein L24, mitochondrial 2723075 8197479 PAS_FragB_0037 Pichia pastoris GS115 54S ribosomal protein L24, mitochondrial XP_002490847.1 2722329 R 644223 CDS PAS_FragB_0038 254567475 8197480 complement(2723298..2725592) 1 NC_012963.1 GTPase-activating protein 2725592 8197480 PAS_FragB_0038 Pichia pastoris GS115 GTPase-activating protein XP_002490848.1 2723298 R 644223 CDS PAS_FragB_0074 254567477 8197481 complement(2725807..2727018) 1 NC_012963.1 hypothetical protein 2727018 8197481 PAS_FragB_0074 Pichia pastoris GS115 hypothetical protein XP_002490849.1 2725807 R 644223 CDS PAS_FragB_0075 254567479 8196515 complement(2727224..2730211) 1 NC_012963.1 Lactose regulatory protein 2730211 8196515 PAS_FragB_0075 Pichia pastoris GS115 Lactose regulatory protein XP_002490850.1 2727224 R 644223 CDS PAS_FragB_0039 254567481 8196516 complement(2730924..2733446) 1 NC_012963.1 DNA-dependent ATPase 2733446 8196516 PAS_FragB_0039 Pichia pastoris GS115 DNA-dependent ATPase XP_002490851.1 2730924 R 644223 CDS PAS_FragB_0076 254567483 8197482 complement(2733553..2733996) 1 NC_012963.1 hypothetical protein 2733996 8197482 PAS_FragB_0076 Pichia pastoris GS115 hypothetical protein XP_002490852.1 2733553 R 644223 CDS PAS_FragB_0040 254567485 8196517 complement(2734545..2736197) 1 NC_012963.1 Serine palmitoyltransferase 1 2736197 8196517 PAS_FragB_0040 Pichia pastoris GS115 Serine palmitoyltransferase 1 XP_002490853.1 2734545 R 644223 CDS PAS_FragB_0041 254567487 8197483 complement(2736483..2737466) 1 NC_012963.1 hypothetical protein 2737466 8197483 PAS_FragB_0041 Pichia pastoris GS115 hypothetical protein XP_002490854.1 2736483 R 644223 CDS PAS_FragB_0042 254567489 8197484 2737748..2738230 1 NC_012963.1 Adrenodoxin homolog, mitochondrial 2738230 8197484 PAS_FragB_0042 Pichia pastoris GS115 Adrenodoxin homolog, mitochondrial XP_002490855.1 2737748 D 644223 CDS PAS_FragB_0043 254567491 8197485 2738676..2740277 1 NC_012963.1 hypothetical protein 2740277 8197485 PAS_FragB_0043 Pichia pastoris GS115 hypothetical protein XP_002490856.1 2738676 D 644223 CDS PAS_FragB_0044 254567493 8197486 complement(2740290..2741636) 1 NC_012963.1 Transcriptional coactivator HFI1/ADA1 2741636 8197486 PAS_FragB_0044 Pichia pastoris GS115 Transcriptional coactivator HFI1/ADA1 XP_002490857.1 2740290 R 644223 CDS PAS_FragB_0045 254567495 8197487 complement(2741895..2743025) 1 NC_012963.1 hypothetical protein 2743025 8197487 PAS_FragB_0045 Pichia pastoris GS115 hypothetical protein XP_002490858.1 2741895 R 644223 CDS PAS_FragB_0046 254567497 8197488 2743401..2744378 1 NC_012963.1 G1/S-specific cyclin 2744378 8197488 PAS_FragB_0046 Pichia pastoris GS115 G1/S-specific cyclin XP_002490859.1 2743401 D 644223 CDS PAS_FragB_0048 254567499 8197489 2745117..2745878 1 NC_012963.1 Protein ROT1 2745878 8197489 PAS_FragB_0048 Pichia pastoris GS115 Protein ROT1 XP_002490860.1 2745117 D 644223 CDS PAS_FragB_0049 254567501 8197490 2746008..2748251 1 NC_012963.1 Vacuolar protein sorting-associated protein 27 2748251 8197490 PAS_FragB_0049 Pichia pastoris GS115 Vacuolar protein sorting-associated protein 27 XP_002490861.1 2746008 D 644223 CDS PAS_FragB_0050 254567503 8197491 2748418..2750151 1 NC_012963.1 Uncharacterized transporter 2750151 8197491 PAS_FragB_0050 Pichia pastoris GS115 Uncharacterized transporter XP_002490862.1 2748418 D 644223 CDS PAS_FragB_0051 254567505 8197492 complement(2750138..2751460) 1 NC_012963.1 hypothetical protein 2751460 8197492 PAS_FragB_0051 Pichia pastoris GS115 hypothetical protein XP_002490863.1 2750138 R 644223 CDS PAS_FragB_0052 254567507 8197493 2752575..2753954 1 NC_012963.1 Translational elongation factor EF-1 alpha 2753954 8197493 PAS_FragB_0052 Pichia pastoris GS115 Translational elongation factor EF-1 alpha XP_002490864.1 2752575 D 644223 CDS PAS_FragB_0053 254567509 8197494 complement(2754159..2757209) 1 NC_012963.1 Glycine dehydrogenase [decarboxylating], mitochondrial 2757209 8197494 PAS_FragB_0053 Pichia pastoris GS115 Glycine dehydrogenase [decarboxylating], mitochondrial XP_002490865.1 2754159 R 644223 CDS PAS_FragB_0054 254567511 8197495 complement(2757392..2758690) 1 NC_012963.1 WD repeat-containing protein 2758690 8197495 PAS_FragB_0054 Pichia pastoris GS115 WD repeat-containing protein XP_002490866.1 2757392 R 644223 CDS PAS_FragB_0055 254567513 8197496 2758933..2759376 1 NC_012963.1 ubiquitin-conjugating enzyme 2759376 8197496 PAS_FragB_0055 Pichia pastoris GS115 ubiquitin-conjugating enzyme XP_002490867.1 2758933 D 644223 CDS PAS_FragB_0056 254567515 8197497 complement(2759410..2763318) 1 NC_012963.1 ATP-dependent helicase 2763318 8197497 PAS_FragB_0056 Pichia pastoris GS115 ATP-dependent helicase XP_002490868.1 2759410 R 644223 CDS PAS_FragB_0057 254567517 8197498 complement(2763489..2766356) 1 NC_012963.1 Exoribonuclease II, mitochondrial 2766356 8197498 PAS_FragB_0057 Pichia pastoris GS115 Exoribonuclease II, mitochondrial XP_002490869.1 2763489 R 644223 CDS PAS_FragB_0058 254567519 8197499 join(2766459..2767672,2767801..2770084,2770239..2770468,2770567..2772613) 1 NC_012963.1 hypothetical protein 2772613 8197499 PAS_FragB_0058 Pichia pastoris GS115 hypothetical protein XP_002490870.1 2766459 D 644223 CDS PAS_FragB_0059 254567521 8197500 2772674..2774734 1 NC_012963.1 hypothetical protein 2774734 8197500 PAS_FragB_0059 Pichia pastoris GS115 hypothetical protein XP_002490871.1 2772674 D 644223 CDS PAS_FragB_0061 254567523 8197501 2775424..2777097 1 NC_012963.1 Phosphoenolpyruvate carboxykinase 2777097 8197501 PAS_FragB_0061 Pichia pastoris GS115 Phosphoenolpyruvate carboxykinase XP_002490872.1 2775424 D 644223 CDS PAS_FragB_0062 254567525 8196505 complement(2777248..2778630) 1 NC_012963.1 Uncharacterized transporter 2778630 8196505 PAS_FragB_0062 Pichia pastoris GS115 Uncharacterized transporter XP_002490873.1 2777248 R 644223 CDS PAS_FragB_0063 254567527 8196506 2778814..2780133 1 NC_012963.1 Polyadenylation factor subunit 2 2780133 8196506 PAS_FragB_0063 Pichia pastoris GS115 Polyadenylation factor subunit 2 XP_002490874.1 2778814 D 644223 CDS PAS_FragB_0064 254567529 8196507 complement(2780187..2781257) 1 NC_012963.1 6-phosphofructo-2-kinase 2781257 8196507 PAS_FragB_0064 Pichia pastoris GS115 6-phosphofructo-2-kinase XP_002490875.1 2780187 R 644223 CDS PAS_FragB_0077 254567531 8196508 complement(2781851..2782378) 1 NC_012963.1 Phosphatidylglycerol/phosphatidylinositol transfer protein 2782378 8196508 PAS_FragB_0077 Pichia pastoris GS115 Phosphatidylglycerol/phosphatidylinositol transfer protein XP_002490876.1 2781851 R 644223 CDS PAS_FragB_0065 254567533 8196518 complement(2782682..2786647) 1 NC_012963.1 Putative ABC transporter 2786647 8196518 PAS_FragB_0065 Pichia pastoris GS115 Putative ABC transporter XP_002490877.1 2782682 R 644223 CDS PAS_FragB_0066 254567535 8196509 2787812..2788420 1 NC_012963.1 Putative transcription factor 2788420 8196509 PAS_FragB_0066 Pichia pastoris GS115 Putative transcription factor XP_002490878.1 2787812 D 644223 CDS PAS_FragB_0067 254567537 8196510 complement(2790871..2795121) 1 NC_012963.1 Mucin-like protein 2795121 8196510 PAS_FragB_0067 Pichia pastoris GS115 Mucin-like protein XP_002490879.1 2790871 R 644223 CDS PAS_FragB_0069 254567539 8196511 join(2796282..2796418,2796650..2796884) 1 NC_012963.1 hypothetical protein 2796884 8196511 PAS_FragB_0069 Pichia pastoris GS115 hypothetical protein XP_002490880.1 2796282 D 644223 CDS PAS_chr2-1_0002 254567541 8198301 complement(266..913) 1 NC_012964.1 hypothetical protein 913 8198301 PAS_chr2-1_0002 Pichia pastoris GS115 hypothetical protein XP_002490881.1 266 R 644223 CDS PAS_chr2-1_0003 254567543 8198122 2666..2827 1 NC_012964.1 hypothetical protein 2827 8198122 PAS_chr2-1_0003 Pichia pastoris GS115 hypothetical protein XP_002490882.1 2666 D 644223 CDS PAS_chr2-1_0004 254567545 8198123 4976..5725 1 NC_012964.1 hypothetical protein 5725 8198123 PAS_chr2-1_0004 Pichia pastoris GS115 hypothetical protein XP_002490883.1 4976 D 644223 CDS PAS_chr2-1_0005 254567547 8198124 7508..8287 1 NC_012964.1 hypothetical protein 8287 8198124 PAS_chr2-1_0005 Pichia pastoris GS115 hypothetical protein XP_002490884.1 7508 D 644223 CDS PAS_chr2-1_0006 254567549 8198125 complement(9189..10913) 1 NC_012964.1 High-affinity glucose transporter of the major facilitator superfamily, expression is induced by low 10913 8198125 PAS_chr2-1_0006 Pichia pastoris GS115 High-affinity glucose transporter of the major facilitator superfamily, expression is induced by low XP_002490885.1 9189 R 644223 CDS PAS_chr2-1_0007 254567551 8198126 complement(join(11580..11679,12583..12767)) 1 NC_012964.1 hypothetical protein 12767 8198126 PAS_chr2-1_0007 Pichia pastoris GS115 hypothetical protein XP_002490886.1 11580 R 644223 CDS PAS_chr2-1_0008 254567553 8198127 13442..13843 1 NC_012964.1 Putative protein-methionine-R-oxide reductase 13843 8198127 PAS_chr2-1_0008 Pichia pastoris GS115 Putative protein-methionine-R-oxide reductase XP_002490887.1 13442 D 644223 CDS PAS_chr2-1_0009 254567555 8198128 complement(join(14152..14390,14621..15947)) 1 NC_012964.1 hypothetical protein 15947 8198128 PAS_chr2-1_0009 Pichia pastoris GS115 hypothetical protein XP_002490888.1 14152 R 644223 CDS PAS_chr2-1_0010 254567557 8198129 16001..16264 1 NC_012964.1 hypothetical protein 16264 8198129 PAS_chr2-1_0010 Pichia pastoris GS115 hypothetical protein XP_002490889.1 16001 D 644223 CDS PAS_chr2-1_0011 254567559 8198130 complement(19388..21388) 1 NC_012964.1 ATPase of the ATP-binding cassette (ABC) family involved in 40S and 60S ribosome biogenesis, has sim 21388 8198130 PAS_chr2-1_0011 Pichia pastoris GS115 ATPase of the ATP-binding cassette (ABC) family involved in 40S and 60S ribosome biogenesis, has sim XP_002490890.1 19388 R 644223 CDS PAS_chr2-1_0012 254567561 8198131 complement(22768..24690) 1 NC_012964.1 Ferrioxamine B transporter, member of the ARN family of transporters that specifically recognize sid 24690 8198131 PAS_chr2-1_0012 Pichia pastoris GS115 Ferrioxamine B transporter, member of the ARN family of transporters that specifically recognize sid XP_002490891.1 22768 R 644223 CDS PAS_chr2-1_0013 254567563 8198132 complement(25107..25298) 1 NC_012964.1 hypothetical protein 25298 8198132 PAS_chr2-1_0013 Pichia pastoris GS115 hypothetical protein XP_002490892.1 25107 R 644223 CDS PAS_chr2-1_0014 254567565 8198133 complement(28006..29259) 1 NC_012964.1 Fe(II)-dependent sulfonate/alpha-ketoglutarate dioxygenase, involved in sulfonate catabolism for use 29259 8198133 PAS_chr2-1_0014 Pichia pastoris GS115 Fe(II)-dependent sulfonate/alpha-ketoglutarate dioxygenase, involved in sulfonate catabolism for use XP_002490893.1 28006 R 644223 CDS PAS_chr2-1_0015 254567567 8198134 complement(30119..30256) 1 NC_012964.1 Putative protein of unknown function identified by fungal homology comparisons and RT-PCR 30256 8198134 PAS_chr2-1_0015 Pichia pastoris GS115 Putative protein of unknown function identified by fungal homology comparisons and RT-PCR XP_002490894.1 30119 R 644223 CDS PAS_chr2-1_0016 254567569 8198135 32010..32696 1 NC_012964.1 2-deoxyglucose-6-phosphate phosphatase, similar to Dog2p, member of a family of low molecular weight 32696 8198135 PAS_chr2-1_0016 Pichia pastoris GS115 2-deoxyglucose-6-phosphate phosphatase, similar to Dog2p, member of a family of low molecular weight XP_002490895.1 32010 D 644223 CDS PAS_chr2-1_0017 254567571 8198136 complement(32786..34195) 1 NC_012964.1 Heme-dependent repressor of hypoxic genes 34195 8198136 PAS_chr2-1_0017 Pichia pastoris GS115 Heme-dependent repressor of hypoxic genes XP_002490896.1 32786 R 644223 CDS PAS_chr2-1_0018 254567573 8198137 complement(35927..36112) 1 NC_012964.1 hypothetical protein 36112 8198137 PAS_chr2-1_0018 Pichia pastoris GS115 hypothetical protein XP_002490897.1 35927 R 644223 CDS PAS_chr2-1_0019 254567575 8198138 complement(37204..37398) 1 NC_012964.1 hypothetical protein 37398 8198138 PAS_chr2-1_0019 Pichia pastoris GS115 hypothetical protein XP_002490898.1 37204 R 644223 CDS PAS_chr2-1_0020 254567577 8198139 complement(join(37498..37643,37946..38027)) 1 NC_012964.1 hypothetical protein 38027 8198139 PAS_chr2-1_0020 Pichia pastoris GS115 hypothetical protein XP_002490899.1 37498 R 644223 CDS PAS_chr2-1_0021 254567579 8198140 complement(join(38470..39155,39579..39639)) 1 NC_012964.1 hypothetical protein 39639 8198140 PAS_chr2-1_0021 Pichia pastoris GS115 hypothetical protein XP_002490900.1 38470 R 644223 CDS PAS_chr2-1_0022 254567581 8198141 join(40239..40343,40425..41054) 1 NC_012964.1 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl7Ap and has similarit 41054 8198141 PAS_chr2-1_0022 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl7Ap and has similarit XP_002490901.1 40239 D 644223 CDS PAS_chr2-1_0023 254567583 8198142 complement(41115..41558) 1 NC_012964.1 Protein of unknown function that may interact with ribosomes, based on co-purification experiments 41558 8198142 PAS_chr2-1_0023 Pichia pastoris GS115 Protein of unknown function that may interact with ribosomes, based on co-purification experiments XP_002490902.1 41115 R 644223 CDS PAS_chr2-1_0024 254567585 8198143 42106..42966 1 NC_012964.1 Putative protein of unknown function 42966 8198143 PAS_chr2-1_0024 Pichia pastoris GS115 Putative protein of unknown function XP_002490903.1 42106 D 644223 CDS PAS_chr2-1_0806 254567587 8198144 complement(42994..44400) 1 NC_012964.1 hypothetical protein 44400 8198144 PAS_chr2-1_0806 Pichia pastoris GS115 hypothetical protein XP_002490904.1 42994 R 644223 CDS PAS_chr2-1_0025 254567589 8198082 complement(44617..49095) 1 NC_012964.1 Non-essential protein of unknown function, contains ATP/GTP-binding site motif A 49095 8198082 PAS_chr2-1_0025 Pichia pastoris GS115 Non-essential protein of unknown function, contains ATP/GTP-binding site motif A XP_002490905.1 44617 R 644223 CDS PAS_chr2-1_0026 254567591 8198145 49531..51141 1 NC_012964.1 Trimeric heat shock transcription factor, activates multiple genes in response to stresses that incl 51141 8198145 PAS_chr2-1_0026 Pichia pastoris GS115 Trimeric heat shock transcription factor, activates multiple genes in response to stresses that incl XP_002490906.1 49531 D 644223 CDS PAS_chr2-1_0027 254567593 8198146 51223..52572 1 NC_012964.1 Putative protein of unknown function 52572 8198146 PAS_chr2-1_0027 Pichia pastoris GS115 Putative protein of unknown function XP_002490907.1 51223 D 644223 CDS PAS_chr2-1_0028 254567595 8198147 complement(52576..54954) 1 NC_012964.1 Putative kinase, suppressor of GTPase mutant, similar to bovine rhodopsin kinase 54954 8198147 PAS_chr2-1_0028 Pichia pastoris GS115 Putative kinase, suppressor of GTPase mutant, similar to bovine rhodopsin kinase XP_002490908.1 52576 R 644223 CDS PAS_chr2-1_0029 254567597 8198148 complement(55127..57685) 1 NC_012964.1 Zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type, involved in the 57685 8198148 PAS_chr2-1_0029 Pichia pastoris GS115 Zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type, involved in the XP_002490909.1 55127 R 644223 CDS PAS_chr2-1_0030 254567599 8198149 complement(57904..59400) 1 NC_012964.1 Putative ATP-dependent RNA helicase of the DEAD-box family involved in ribosomal biogenesis 59400 8198149 PAS_chr2-1_0030 Pichia pastoris GS115 Putative ATP-dependent RNA helicase of the DEAD-box family involved in ribosomal biogenesis XP_002490910.1 57904 R 644223 CDS PAS_chr2-1_0031 254567601 8198150 join(59772..60263,60317..60376) 1 NC_012964.1 Protein of unknown function required for normal levels of resistance to oxidative damage, null mutan 60376 8198150 PAS_chr2-1_0031 Pichia pastoris GS115 Protein of unknown function required for normal levels of resistance to oxidative damage, null mutan XP_002490911.1 59772 D 644223 CDS PAS_chr2-1_0032 254567603 8198151 complement(60473..61231) 1 NC_012964.1 Putative protein of unknown function with similarity to glutamine amidotransferase proteins 61231 8198151 PAS_chr2-1_0032 Pichia pastoris GS115 Putative protein of unknown function with similarity to glutamine amidotransferase proteins XP_002490912.1 60473 R 644223 CDS PAS_chr2-1_0033 254567605 8198152 61726..62640 1 NC_012964.1 Nitrogen catabolite repression transcriptional regulator that acts by inhibition of GLN3 transcripti 62640 8198152 PAS_chr2-1_0033 Pichia pastoris GS115 Nitrogen catabolite repression transcriptional regulator that acts by inhibition of GLN3 transcripti XP_002490913.1 61726 D 644223 CDS PAS_chr2-1_0034 254567607 8198153 complement(62702..63853) 1 NC_012964.1 hypothetical protein 63853 8198153 PAS_chr2-1_0034 Pichia pastoris GS115 hypothetical protein XP_002490914.1 62702 R 644223 CDS PAS_chr2-1_0035 254567609 8198154 63910..64101 1 NC_012964.1 hypothetical protein 64101 8198154 PAS_chr2-1_0035 Pichia pastoris GS115 hypothetical protein XP_002490915.1 63910 D 644223 CDS PAS_chr2-1_0036 254567611 8198155 complement(64168..64995) 1 NC_012964.1 hypothetical protein 64995 8198155 PAS_chr2-1_0036 Pichia pastoris GS115 hypothetical protein XP_002490916.1 64168 R 644223 CDS PAS_chr2-1_0037 254567613 8198156 65610..66530 1 NC_012964.1 Nitrilase, member of the nitrilase branch of the nitrilase superfamily 66530 8198156 PAS_chr2-1_0037 Pichia pastoris GS115 Nitrilase, member of the nitrilase branch of the nitrilase superfamily XP_002490917.1 65610 D 644223 CDS PAS_chr2-1_0038 254567615 8198157 67060..67641 1 NC_012964.1 hypothetical protein 67641 8198157 PAS_chr2-1_0038 Pichia pastoris GS115 hypothetical protein XP_002490918.1 67060 D 644223 CDS PAS_chr2-1_0039 254567617 8198158 complement(67727..70477) 1 NC_012964.1 Essential 121kDa subunit of the exocyst complex (Sec3p, Sec5p, Sec6p, Sec8p, Sec10p, Sec15p, Exo70p 70477 8198158 PAS_chr2-1_0039 Pichia pastoris GS115 Essential 121kDa subunit of the exocyst complex (Sec3p, Sec5p, Sec6p, Sec8p, Sec10p, Sec15p, Exo70p XP_002490919.1 67727 R 644223 CDS PAS_chr2-1_0040 254567619 8198159 complement(70761..72305) 1 NC_012964.1 Protein with similarity to ATP-binding cassette (ABC) transporter family members 72305 8198159 PAS_chr2-1_0040 Pichia pastoris GS115 Protein with similarity to ATP-binding cassette (ABC) transporter family members XP_002490920.1 70761 R 644223 CDS PAS_chr2-1_0041 254567621 8198160 72637..74013 1 NC_012964.1 hypothetical protein 74013 8198160 PAS_chr2-1_0041 Pichia pastoris GS115 hypothetical protein XP_002490921.1 72637 D 644223 CDS PAS_chr2-1_0042 254567623 8198161 complement(74120..74983) 1 NC_012964.1 Hsp70 (Ssa1p) nucleotide exchange factor, cytosolic homolog of Sil1p, which is the nucleotide exchan 74983 8198161 PAS_chr2-1_0042 Pichia pastoris GS115 Hsp70 (Ssa1p) nucleotide exchange factor, cytosolic homolog of Sil1p, which is the nucleotide exchan XP_002490922.1 74120 R 644223 CDS PAS_chr2-1_0043 254567625 8198162 join(75124..75178,75319..76250) 1 NC_012964.1 Subunit of TFIIH complex, involved in transcription initiation, similar to 34 kDa subunit of human T 76250 8198162 PAS_chr2-1_0043 Pichia pastoris GS115 Subunit of TFIIH complex, involved in transcription initiation, similar to 34 kDa subunit of human T XP_002490923.1 75124 D 644223 CDS PAS_chr2-1_0044 254567627 8198163 complement(76262..76690) 1 NC_012964.1 hypothetical protein 76690 8198163 PAS_chr2-1_0044 Pichia pastoris GS115 hypothetical protein XP_002490924.1 76262 R 644223 CDS PAS_chr2-1_0045 254567629 8198164 76765..77550 1 NC_012964.1 hypothetical protein 77550 8198164 PAS_chr2-1_0045 Pichia pastoris GS115 hypothetical protein XP_002490925.1 76765 D 644223 CDS PAS_chr2-1_0046 254567631 8198165 join(77696..77733,77795..78083) 1 NC_012964.1 hypothetical protein 78083 8198165 PAS_chr2-1_0046 Pichia pastoris GS115 hypothetical protein XP_002490926.1 77696 D 644223 CDS PAS_chr2-1_0047 254567633 8198166 complement(78280..78732) 1 NC_012964.1 Cytosine deaminase, zinc metalloenzyme that catalyzes the hydrolytic deamination of cytosine to urac 78732 8198166 PAS_chr2-1_0047 Pichia pastoris GS115 Cytosine deaminase, zinc metalloenzyme that catalyzes the hydrolytic deamination of cytosine to urac XP_002490927.1 78280 R 644223 CDS PAS_chr2-1_0048 254567635 8198167 79295..81538 1 NC_012964.1 Ferric reductase and cupric reductase, reduces siderophore-bound iron and oxidized copper prior to u 81538 8198167 PAS_chr2-1_0048 Pichia pastoris GS115 Ferric reductase and cupric reductase, reduces siderophore-bound iron and oxidized copper prior to u XP_002490928.1 79295 D 644223 CDS PAS_chr2-1_0049 254567637 8198168 81862..83619 1 NC_012964.1 Aminophospholipid translocase (flippase) that maintains membrane lipid asymmetry in post-Golgi secre 83619 8198168 PAS_chr2-1_0049 Pichia pastoris GS115 Aminophospholipid translocase (flippase) that maintains membrane lipid asymmetry in post-Golgi secre XP_002490929.1 81862 D 644223 CDS PAS_chr2-1_0807 254567639 8198169 83824..88701 1 NC_012964.1 hypothetical protein 88701 8198169 PAS_chr2-1_0807 Pichia pastoris GS115 hypothetical protein XP_002490930.1 83824 D 644223 CDS PAS_chr2-1_0050 254567641 8198083 88960..92829 1 NC_012964.1 Plasma membrane ATP-binding cassette (ABC) transporter required for the export of a-factor, catalyze 92829 8198083 PAS_chr2-1_0050 Pichia pastoris GS115 Plasma membrane ATP-binding cassette (ABC) transporter required for the export of a-factor, catalyze XP_002490931.1 88960 D 644223 CDS PAS_chr2-1_0051 254567643 8198170 93286..94329 1 NC_012964.1 hypothetical protein 94329 8198170 PAS_chr2-1_0051 Pichia pastoris GS115 hypothetical protein XP_002490932.1 93286 D 644223 CDS PAS_chr2-1_0052 254567645 8198171 complement(94422..95816) 1 NC_012964.1 Cell wall protein with similarity to glucanases 95816 8198171 PAS_chr2-1_0052 Pichia pastoris GS115 Cell wall protein with similarity to glucanases XP_002490933.1 94422 R 644223 CDS PAS_chr2-1_0053 254567647 8198172 join(96002..96125,96228..96340) 1 NC_012964.1 hypothetical protein 96340 8198172 PAS_chr2-1_0053 Pichia pastoris GS115 hypothetical protein XP_002490934.1 96002 D 644223 CDS PAS_chr2-1_0054 254567649 8198173 96665..98233 1 NC_012964.1 Putative hexose transporter, expressed at low levels and expression is repressed by glucose 98233 8198173 PAS_chr2-1_0054 Pichia pastoris GS115 Putative hexose transporter, expressed at low levels and expression is repressed by glucose XP_002490935.1 96665 D 644223 CDS PAS_chr2-1_0055 254567651 8198174 98740..100866 1 NC_012964.1 Plasma membrane transporter for both urea and polyamines, expression is highly sensitive to nitrogen 100866 8198174 PAS_chr2-1_0055 Pichia pastoris GS115 Plasma membrane transporter for both urea and polyamines, expression is highly sensitive to nitrogen XP_002490936.1 98740 D 644223 CDS PAS_chr2-1_0056 254567654 8198175 101035..102195 1 NC_012964.1 Palmitoyltransferase that acts on the SNAREs Snc1p, Syn8p, Tlg1p and likely on all SNAREs 102195 8198175 PAS_chr2-1_0056 Pichia pastoris GS115 Palmitoyltransferase that acts on the SNAREs Snc1p, Syn8p, Tlg1p and likely on all SNAREs XP_002490937.1 101035 D 644223 CDS PAS_chr2-1_0057 254567656 8198176 complement(102265..106845) 1 NC_012964.1 Aminophospholipid translocase (flippase) that localizes primarily to the plasma membrane 106845 8198176 PAS_chr2-1_0057 Pichia pastoris GS115 Aminophospholipid translocase (flippase) that localizes primarily to the plasma membrane XP_002490938.1 102265 R 644223 CDS PAS_chr2-1_0058 254567658 8198177 complement(107358..107813) 1 NC_012964.1 Ubiquitin-conjugating enzyme involved in the error-free DNA postreplication repair pathway 107813 8198177 PAS_chr2-1_0058 Pichia pastoris GS115 Ubiquitin-conjugating enzyme involved in the error-free DNA postreplication repair pathway XP_002490939.1 107358 R 644223 CDS PAS_chr2-1_0059 254567660 8198178 108193..108432 1 NC_012964.1 hypothetical protein 108432 8198178 PAS_chr2-1_0059 Pichia pastoris GS115 hypothetical protein XP_002490940.1 108193 D 644223 CDS PAS_chr2-1_0060 254567662 8198179 108797..109495 1 NC_012964.1 Hydroperoxide and superoxide-radical responsive glutathione-dependent oxidoreductase 109495 8198179 PAS_chr2-1_0060 Pichia pastoris GS115 Hydroperoxide and superoxide-radical responsive glutathione-dependent oxidoreductase XP_002490941.1 108797 D 644223 CDS PAS_chr2-1_0061 254567664 8198180 complement(109581..110858) 1 NC_012964.1 Checkpoint protein, involved in the activation of the DNA damage and meiotic pachytene checkpoints 110858 8198180 PAS_chr2-1_0061 Pichia pastoris GS115 Checkpoint protein, involved in the activation of the DNA damage and meiotic pachytene checkpoints XP_002490942.1 109581 R 644223 CDS PAS_chr2-1_0062 254567666 8198181 111011..112648 1 NC_012964.1 JmjC domain-containing histone demethylase which can specifically demethylate H3K36 tri-and dimethy 112648 8198181 PAS_chr2-1_0062 Pichia pastoris GS115 JmjC domain-containing histone demethylase which can specifically demethylate H3K36 tri-and dimethy XP_002490943.1 111011 D 644223 CDS PAS_chr2-1_0063 254567668 8198182 complement(112637..113545) 1 NC_012964.1 hypothetical protein 113545 8198182 PAS_chr2-1_0063 Pichia pastoris GS115 hypothetical protein XP_002490944.1 112637 R 644223 CDS PAS_chr2-1_0064 254567670 8198183 114025..114345 1 NC_012964.1 hypothetical protein 114345 8198183 PAS_chr2-1_0064 Pichia pastoris GS115 hypothetical protein XP_002490945.1 114025 D 644223 CDS PAS_chr2-1_0065 254567672 8198461 115122..118688 1 NC_012964.1 Chitin synthase III, catalyzes the transfer of N-acetylglucosamine (GlcNAc) to chitin 118688 8198461 PAS_chr2-1_0065 Pichia pastoris GS115 Chitin synthase III, catalyzes the transfer of N-acetylglucosamine (GlcNAc) to chitin XP_002490946.1 115122 D 644223 CDS PAS_chr2-1_0066 254567674 8198462 complement(118734..123380) 1 NC_012964.1 Peripheral membrane protein with a role in endocytosis and vacuole integrity, interacts with Arl1p a 123380 8198462 PAS_chr2-1_0066 Pichia pastoris GS115 Peripheral membrane protein with a role in endocytosis and vacuole integrity, interacts with Arl1p a XP_002490947.1 118734 R 644223 CDS PAS_chr2-1_0067 254567676 8198463 123721..124896 1 NC_012964.1 Pseudouridine synthase, catalyzes only the formation of pseudouridine-55 (Psi55), a highly conserved 124896 8198463 PAS_chr2-1_0067 Pichia pastoris GS115 Pseudouridine synthase, catalyzes only the formation of pseudouridine-55 (Psi55), a highly conserved XP_002490948.1 123721 D 644223 CDS PAS_chr2-1_0068 254567678 8198464 complement(124961..126730) 1 NC_012964.1 N-glycosylated integral membrane protein of the ER membrane and plasma membrane, functions as a stre 126730 8198464 PAS_chr2-1_0068 Pichia pastoris GS115 N-glycosylated integral membrane protein of the ER membrane and plasma membrane, functions as a stre XP_002490949.1 124961 R 644223 CDS PAS_chr2-1_0069 254567680 8198465 127073..128071 1 NC_012964.1 Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase t 128071 8198465 PAS_chr2-1_0069 Pichia pastoris GS115 Subunit of heteropentameric Replication factor C (RF-C), which is a DNA binding protein and ATPase t XP_002490950.1 127073 D 644223 CDS PAS_chr2-1_0070 254567682 8198466 128169..128714 1 NC_012964.1 Phosphatase that is highly specific for ADP-ribose 1''-phosphate, a tRNA splicing metabolite 128714 8198466 PAS_chr2-1_0070 Pichia pastoris GS115 Phosphatase that is highly specific for ADP-ribose 1''-phosphate, a tRNA splicing metabolite XP_002490951.1 128169 D 644223 CDS PAS_chr2-1_0071 254567684 8198467 complement(128737..130011) 1 NC_012964.1 Putative protein kinase, possible substrate of cAMP-dependent protein kinase (PKA) 130011 8198467 PAS_chr2-1_0071 Pichia pastoris GS115 Putative protein kinase, possible substrate of cAMP-dependent protein kinase (PKA) XP_002490952.1 128737 R 644223 CDS PAS_chr2-1_0072 254567686 8198468 130900..132387 1 NC_012964.1 Delta(9) fatty acid desaturase 132387 8198468 PAS_chr2-1_0072 Pichia pastoris GS115 Delta(9) fatty acid desaturase XP_002490953.1 130900 D 644223 CDS PAS_chr2-1_0073 254567688 8198469 complement(132422..133921) 1 NC_012964.1 Component of the RIM101 pathway, has a role in cell wall construction and alkaline pH response 133921 8198469 PAS_chr2-1_0073 Pichia pastoris GS115 Component of the RIM101 pathway, has a role in cell wall construction and alkaline pH response XP_002490954.1 132422 R 644223 CDS PAS_chr2-1_0074 254567690 8198470 134416..135756 1 NC_012964.1 GTPase-activating protein for Sec4p and several other Rab GTPases, regulates exocytosis via its acti 135756 8198470 PAS_chr2-1_0074 Pichia pastoris GS115 GTPase-activating protein for Sec4p and several other Rab GTPases, regulates exocytosis via its acti XP_002490955.1 134416 D 644223 CDS PAS_chr2-1_0075 254567692 8198471 complement(135753..136400) 1 NC_012964.1 hypothetical protein 136400 8198471 PAS_chr2-1_0075 Pichia pastoris GS115 hypothetical protein XP_002490956.1 135753 R 644223 CDS PAS_chr2-1_0076 254567694 8198472 136541..137110 1 NC_012964.1 hypothetical protein 137110 8198472 PAS_chr2-1_0076 Pichia pastoris GS115 hypothetical protein XP_002490957.1 136541 D 644223 CDS PAS_chr2-1_0077 254567696 8198473 137155..138129 1 NC_012964.1 hypothetical protein 138129 8198473 PAS_chr2-1_0077 Pichia pastoris GS115 hypothetical protein XP_002490958.1 137155 D 644223 CDS PAS_chr2-1_0078 254567698 8198474 138721..140799 1 NC_012964.1 Plasma membrane G protein coupled receptor (GPCR) that interacts with the heterotrimeric G protein a 140799 8198474 PAS_chr2-1_0078 Pichia pastoris GS115 Plasma membrane G protein coupled receptor (GPCR) that interacts with the heterotrimeric G protein a XP_002490959.1 138721 D 644223 CDS PAS_chr2-1_0079 254567700 8198475 complement(140981..142621) 1 NC_012964.1 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of 142621 8198475 PAS_chr2-1_0079 Pichia pastoris GS115 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p, required for the assembly of XP_002490960.1 140981 R 644223 CDS PAS_chr2-1_0080 254567702 8198476 complement(142809..144665) 1 NC_012964.1 Peripheral protein of the cytosolic face of the mitochondrial outer membrane, required for mitochond 144665 8198476 PAS_chr2-1_0080 Pichia pastoris GS115 Peripheral protein of the cytosolic face of the mitochondrial outer membrane, required for mitochond XP_002490961.1 142809 R 644223 CDS PAS_chr2-1_0081 254567704 8198477 complement(144960..145517) 1 NC_012964.1 hypothetical protein 145517 8198477 PAS_chr2-1_0081 Pichia pastoris GS115 hypothetical protein XP_002490962.1 144960 R 644223 CDS PAS_chr2-1_0082 254567706 8198478 145849..149526 1 NC_012964.1 Subunit of the multiprotein cohesin complex, essential protein involved in chromosome segregation an 149526 8198478 PAS_chr2-1_0082 Pichia pastoris GS115 Subunit of the multiprotein cohesin complex, essential protein involved in chromosome segregation an XP_002490963.1 145849 D 644223 CDS PAS_chr2-1_0083 254567708 8198479 complement(149547..151085) 1 NC_012964.1 hypothetical protein 151085 8198479 PAS_chr2-1_0083 Pichia pastoris GS115 hypothetical protein XP_002490964.1 149547 R 644223 CDS PAS_chr2-1_0084 254567710 8198480 151366..152019 1 NC_012964.1 Protein possibly involved in a post-Golgi secretory pathway 152019 8198480 PAS_chr2-1_0084 Pichia pastoris GS115 Protein possibly involved in a post-Golgi secretory pathway XP_002490965.1 151366 D 644223 CDS PAS_chr2-1_0085 254567712 8198481 complement(152016..153131) 1 NC_012964.1 Putative glycoprotease proposed to be in transcription as a component of the EKC protein complex wit 153131 8198481 PAS_chr2-1_0085 Pichia pastoris GS115 Putative glycoprotease proposed to be in transcription as a component of the EKC protein complex wit XP_002490966.1 152016 R 644223 CDS PAS_chr2-1_0086 254567714 8198482 complement(153341..153817) 1 NC_012964.1 Ribosomal protein L30 of the large (60S) ribosomal subunit, nearly identical to Rpl24Ap and has simi 153817 8198482 PAS_chr2-1_0086 Pichia pastoris GS115 Ribosomal protein L30 of the large (60S) ribosomal subunit, nearly identical to Rpl24Ap and has simi XP_002490967.1 153341 R 644223 CDS PAS_chr2-1_0087 254567716 8198483 join(154085..154087,154149..154469) 1 NC_012964.1 Protein component of the large (60S) ribosomal subunit, has similarity to rat L30 ribosomal protein 154469 8198483 PAS_chr2-1_0087 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit, has similarity to rat L30 ribosomal protein XP_002490968.1 154085 D 644223 CDS PAS_chr2-1_0088 254567718 8198484 155095..156714 1 NC_012964.1 hypothetical protein 156714 8198484 PAS_chr2-1_0088 Pichia pastoris GS115 hypothetical protein XP_002490969.1 155095 D 644223 CDS PAS_chr2-1_0089 254567720 8198485 complement(156825..159830) 1 NC_012964.1 Component of the mitochondrial alpha-ketoglutarate dehydrogenase complex, which catalyzes a key step 159830 8198485 PAS_chr2-1_0089 Pichia pastoris GS115 Component of the mitochondrial alpha-ketoglutarate dehydrogenase complex, which catalyzes a key step XP_002490970.1 156825 R 644223 CDS PAS_chr2-1_0090 254567722 8198486 160918..162453 1 NC_012964.1 tRNA methyltransferase, localizes to both the nucleus and mitochondrion to produce the modified base 162453 8198486 PAS_chr2-1_0090 Pichia pastoris GS115 tRNA methyltransferase, localizes to both the nucleus and mitochondrion to produce the modified base XP_002490971.1 160918 D 644223 CDS PAS_chr2-1_0091 254567724 8198487 complement(162816..163547) 1 NC_012964.1 hypothetical protein 163547 8198487 PAS_chr2-1_0091 Pichia pastoris GS115 hypothetical protein XP_002490972.1 162816 R 644223 CDS PAS_chr2-1_0092 254567726 8198488 164552..165376 1 NC_012964.1 Pho85 cyclin of the Pcl1,2-like subfamily, involved in entry into the mitotic cell cycle and regulat 165376 8198488 PAS_chr2-1_0092 Pichia pastoris GS115 Pho85 cyclin of the Pcl1,2-like subfamily, involved in entry into the mitotic cell cycle and regulat XP_002490973.1 164552 D 644223 CDS PAS_chr2-1_0093 254567728 8198489 165774..167102 1 NC_012964.1 GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase), synthesizes GDP-mannose from 167102 8198489 PAS_chr2-1_0093 Pichia pastoris GS115 GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase), synthesizes GDP-mannose from XP_002490974.1 165774 D 644223 CDS PAS_chr2-1_0094 254567730 8198490 167266..170787 1 NC_012964.1 Protein required for mismatch repair in mitosis and meiosis, forms a complex with Msh2p to repair bo 170787 8198490 PAS_chr2-1_0094 Pichia pastoris GS115 Protein required for mismatch repair in mitosis and meiosis, forms a complex with Msh2p to repair bo XP_002490975.1 167266 D 644223 CDS PAS_chr2-1_0808 254567732 8198491 complement(join(170844..172119,172181..172191)) 1 NC_012964.1 hypothetical protein 172191 8198491 PAS_chr2-1_0808 Pichia pastoris GS115 hypothetical protein XP_002490976.1 170844 R 644223 CDS PAS_chr2-1_0095 254567734 8198084 complement(173188..177351) 1 NC_012964.1 Nucleosome remodeling factor that functions in regulation of transcription elongation 177351 8198084 PAS_chr2-1_0095 Pichia pastoris GS115 Nucleosome remodeling factor that functions in regulation of transcription elongation XP_002490977.1 173188 R 644223 CDS PAS_chr2-1_0096 254567736 8198492 178705..180525 1 NC_012964.1 Essential iron-sulfur protein required for ribosome biogenesis and translation initiation 180525 8198492 PAS_chr2-1_0096 Pichia pastoris GS115 Essential iron-sulfur protein required for ribosome biogenesis and translation initiation XP_002490978.1 178705 D 644223 CDS PAS_chr2-1_0097 254567738 8198493 181250..183130 1 NC_012964.1 Poly(A) binding protein, part of the 3'-end RNA-processing complex, mediates interactions between th 183130 8198493 PAS_chr2-1_0097 Pichia pastoris GS115 Poly(A) binding protein, part of the 3'-end RNA-processing complex, mediates interactions between th XP_002490979.1 181250 D 644223 CDS PAS_chr2-1_0098 254567740 8198494 complement(183385..183726) 1 NC_012964.1 hypothetical protein 183726 8198494 PAS_chr2-1_0098 Pichia pastoris GS115 hypothetical protein XP_002490980.1 183385 R 644223 CDS PAS_chr2-1_0099 254567742 8198495 join(183904..183934,183990..184891) 1 NC_012964.1 hypothetical protein 184891 8198495 PAS_chr2-1_0099 Pichia pastoris GS115 hypothetical protein XP_002490981.1 183904 D 644223 CDS PAS_chr2-1_0100 254567744 8198496 complement(join(184895..185536,185588..185686)) 1 NC_012964.1 Shared subunit of DNA polymerase (II) epsilon and of ISW2/yCHRAC chromatin accessibility complex 185686 8198496 PAS_chr2-1_0100 Pichia pastoris GS115 Shared subunit of DNA polymerase (II) epsilon and of ISW2/yCHRAC chromatin accessibility complex XP_002490982.1 184895 R 644223 CDS PAS_chr2-1_0101 254567746 8198497 185845..186891 1 NC_012964.1 Exopolyphosphatase, hydrolyzes inorganic polyphosphate (poly P) into Pi residues 186891 8198497 PAS_chr2-1_0101 Pichia pastoris GS115 Exopolyphosphatase, hydrolyzes inorganic polyphosphate (poly P) into Pi residues XP_002490983.1 185845 D 644223 CDS PAS_chr2-1_0102 254567748 8198498 complement(187101..188309) 1 NC_012964.1 B-type cyclin involved in cell cycle progression 188309 8198498 PAS_chr2-1_0102 Pichia pastoris GS115 B-type cyclin involved in cell cycle progression XP_002490984.1 187101 R 644223 CDS PAS_chr2-1_0103 254567750 8198499 189096..190502 1 NC_012964.1 One of three repressible acid phosphatases, a glycoprotein that is transported to the cell surface 190502 8198499 PAS_chr2-1_0103 Pichia pastoris GS115 One of three repressible acid phosphatases, a glycoprotein that is transported to the cell surface XP_002490985.1 189096 D 644223 CDS PAS_chr2-1_0104 254567752 8198500 complement(join(190625..190924,190978..191148)) 1 NC_012964.1 hypothetical protein 191148 8198500 PAS_chr2-1_0104 Pichia pastoris GS115 hypothetical protein XP_002490986.1 190625 R 644223 CDS PAS_chr2-1_0809 254567754 8198501 complement(191513..192286) 1 NC_012964.1 hypothetical protein 192286 8198501 PAS_chr2-1_0809 Pichia pastoris GS115 hypothetical protein XP_002490987.1 191513 R 644223 CDS PAS_chr2-1_0105 254567756 8198085 complement(192872..194509) 1 NC_012964.1 Shuttling pre-60S factor 194509 8198085 PAS_chr2-1_0105 Pichia pastoris GS115 Shuttling pre-60S factor XP_002490988.1 192872 R 644223 CDS PAS_chr2-1_0106 254567758 8198502 complement(194627..195670) 1 NC_012964.1 Protein necessary for structural stability of L-A double-stranded RNA-containing particles 195670 8198502 PAS_chr2-1_0106 Pichia pastoris GS115 Protein necessary for structural stability of L-A double-stranded RNA-containing particles XP_002490989.1 194627 R 644223 CDS PAS_chr2-1_0107 254567760 8198503 195830..197170 1 NC_012964.1 Gamma-aminobutyrate (GABA) transaminase (4-aminobutyrate aminotransferase) involved in the 4-aminobu 197170 8198503 PAS_chr2-1_0107 Pichia pastoris GS115 Gamma-aminobutyrate (GABA) transaminase (4-aminobutyrate aminotransferase) involved in the 4-aminobu XP_002490990.1 195830 D 644223 CDS PAS_chr2-1_0108 254567762 8198504 complement(197175..199376) 1 NC_012964.1 hypothetical protein 199376 8198504 PAS_chr2-1_0108 Pichia pastoris GS115 hypothetical protein XP_002490991.1 197175 R 644223 CDS PAS_chr2-1_0109 254567764 8198505 complement(199543..201117) 1 NC_012964.1 Putative protein of unknown function 201117 8198505 PAS_chr2-1_0109 Pichia pastoris GS115 Putative protein of unknown function XP_002490992.1 199543 R 644223 CDS PAS_chr2-1_0810 254567766 8198506 complement(201383..202243) 1 NC_012964.1 hypothetical protein 202243 8198506 PAS_chr2-1_0810 Pichia pastoris GS115 hypothetical protein XP_002490993.1 201383 R 644223 CDS PAS_chr2-1_0110 254567768 8198086 202765..204114 1 NC_012964.1 Fructose-2,6-bisphosphatase, required for glucose metabolism 204114 8198086 PAS_chr2-1_0110 Pichia pastoris GS115 Fructose-2,6-bisphosphatase, required for glucose metabolism XP_002490994.1 202765 D 644223 CDS PAS_chr2-1_0111 254567770 8198507 204478..205149 1 NC_012964.1 Mitochondrial adenylate kinase, catalyzes the reversible synthesis of GTP and AMP from GDP and ADP 205149 8198507 PAS_chr2-1_0111 Pichia pastoris GS115 Mitochondrial adenylate kinase, catalyzes the reversible synthesis of GTP and AMP from GDP and ADP XP_002490995.1 204478 D 644223 CDS PAS_chr2-1_0112 254567772 8198508 205915..206490 1 NC_012964.1 Small rho-like GTPase, essential for establishment and maintenance of cell polarity 206490 8198508 PAS_chr2-1_0112 Pichia pastoris GS115 Small rho-like GTPase, essential for establishment and maintenance of cell polarity XP_002490996.1 205915 D 644223 CDS PAS_chr2-1_0113 254567774 8198509 206976..208646 1 NC_012964.1 Alpha subunit of chaperonin-containing T-complex, which mediates protein folding in the cytosol 208646 8198509 PAS_chr2-1_0113 Pichia pastoris GS115 Alpha subunit of chaperonin-containing T-complex, which mediates protein folding in the cytosol XP_002490997.1 206976 D 644223 CDS PAS_chr2-1_0114 254567776 8198510 208795..210153 1 NC_012964.1 Sterol regulatory element binding protein, induces transcription of sterol transport and biosyntheti 210153 8198510 PAS_chr2-1_0114 Pichia pastoris GS115 Sterol regulatory element binding protein, induces transcription of sterol transport and biosyntheti XP_002490998.1 208795 D 644223 CDS PAS_chr2-1_0115 254567778 8198511 complement(210225..211856) 1 NC_012964.1 Mitochondrial cytochrome-c peroxidase 211856 8198511 PAS_chr2-1_0115 Pichia pastoris GS115 Mitochondrial cytochrome-c peroxidase XP_002490999.1 210225 R 644223 CDS PAS_chr2-1_0116 254567780 8198512 complement(212008..213444) 1 NC_012964.1 Actin-associated protein, subunit of a complex (Rvs161p-Rvs167p) 213444 8198512 PAS_chr2-1_0116 Pichia pastoris GS115 Actin-associated protein, subunit of a complex (Rvs161p-Rvs167p) XP_002491000.1 212008 R 644223 CDS PAS_chr2-1_0117 254567782 8198513 214127..215635 1 NC_012964.1 GTPase activating protein (GAP) for Rho1p, involved in signaling to the actin cytoskeleton, null mut 215635 8198513 PAS_chr2-1_0117 Pichia pastoris GS115 GTPase activating protein (GAP) for Rho1p, involved in signaling to the actin cytoskeleton, null mut XP_002491001.1 214127 D 644223 CDS PAS_chr2-1_0118 254567784 8198514 215905..217332 1 NC_012964.1 GTPase activating protein (GAP) for Rho1p, involved in signaling to the actin cytoskeleton, null mut 217332 8198514 PAS_chr2-1_0118 Pichia pastoris GS115 GTPase activating protein (GAP) for Rho1p, involved in signaling to the actin cytoskeleton, null mut XP_002491002.1 215905 D 644223 CDS PAS_chr2-1_0119 254567786 8198515 complement(join(217388..218424,218703..219207)) 1 NC_012964.1 Nuclear protein that acts as a heterodimer with Aos1p to activate Smt3p (SUMO) before its conjugatio 219207 8198515 PAS_chr2-1_0119 Pichia pastoris GS115 Nuclear protein that acts as a heterodimer with Aos1p to activate Smt3p (SUMO) before its conjugatio XP_002491003.1 217388 R 644223 CDS PAS_chr2-1_0120 254567788 8198516 219568..220668 1 NC_012964.1 Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase, which catalyzes the oxidation of 220668 8198516 PAS_chr2-1_0120 Pichia pastoris GS115 Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase, which catalyzes the oxidation of XP_002491004.1 219568 D 644223 CDS PAS_chr2-1_0121 254567790 8198517 220873..221508 1 NC_012964.1 Phosphoribosyl-glycinamide transformylase, catalyzes a step in the 'de novo' purine nucleotide biosy 221508 8198517 PAS_chr2-1_0121 Pichia pastoris GS115 Phosphoribosyl-glycinamide transformylase, catalyzes a step in the 'de novo' purine nucleotide biosy XP_002491005.1 220873 D 644223 CDS PAS_chr2-1_0122 254567792 8198518 complement(221574..222371) 1 NC_012964.1 Endopeptidase with trypsin-like activity that cleaves after basic residues 222371 8198518 PAS_chr2-1_0122 Pichia pastoris GS115 Endopeptidase with trypsin-like activity that cleaves after basic residues XP_002491006.1 221574 R 644223 CDS PAS_chr2-1_0123 254567794 8198519 complement(222543..225605) 1 NC_012964.1 Mitochondrial isoleucyl-tRNA synthetase, null mutant is deficient in respiratory growth 225605 8198519 PAS_chr2-1_0123 Pichia pastoris GS115 Mitochondrial isoleucyl-tRNA synthetase, null mutant is deficient in respiratory growth XP_002491007.1 222543 R 644223 CDS PAS_chr2-1_0811 254567796 8198520 complement(225734..229303) 1 NC_012964.1 hypothetical protein 229303 8198520 PAS_chr2-1_0811 Pichia pastoris GS115 hypothetical protein XP_002491008.1 225734 R 644223 CDS PAS_chr2-1_0812 254567798 8198087 complement(join(229592..232116,232194..232197)) 1 NC_012964.1 hypothetical protein 232197 8198087 PAS_chr2-1_0812 Pichia pastoris GS115 hypothetical protein XP_002491009.1 229592 R 644223 CDS PAS_chr2-1_0124 254567800 8198088 complement(232523..235630) 1 NC_012964.1 Elongation factor 2 (EF-2), also encoded by EFT1 235630 8198088 PAS_chr2-1_0124 Pichia pastoris GS115 Elongation factor 2 (EF-2), also encoded by EFT1 XP_002491010.1 232523 R 644223 CDS PAS_chr2-1_0125 254567802 8198521 complement(236012..239695) 1 NC_012964.1 RNA polymerase II second largest subunit B150, part of central core 239695 8198521 PAS_chr2-1_0125 Pichia pastoris GS115 RNA polymerase II second largest subunit B150, part of central core XP_002491011.1 236012 R 644223 CDS PAS_chr2-1_0126 254567804 8198522 240254..240898 1 NC_012964.1 Mitochondrial ribosomal protein of the large subunit 240898 8198522 PAS_chr2-1_0126 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002491012.1 240254 D 644223 CDS PAS_chr2-1_0127 254567806 8198523 complement(241114..241869) 1 NC_012964.1 hypothetical protein 241869 8198523 PAS_chr2-1_0127 Pichia pastoris GS115 hypothetical protein XP_002491013.1 241114 R 644223 CDS PAS_chr2-1_0128 254567808 8198524 complement(242072..242320) 1 NC_012964.1 hypothetical protein 242320 8198524 PAS_chr2-1_0128 Pichia pastoris GS115 hypothetical protein XP_002491014.1 242072 R 644223 CDS PAS_chr2-1_0129 254567810 8198525 243124..244884 1 NC_012964.1 Proline permease, required for high-affinity transport of proline 244884 8198525 PAS_chr2-1_0129 Pichia pastoris GS115 Proline permease, required for high-affinity transport of proline XP_002491015.1 243124 D 644223 CDS PAS_chr2-1_0130 254567812 8198526 complement(245149..246549) 1 NC_012964.1 hypothetical protein 246549 8198526 PAS_chr2-1_0130 Pichia pastoris GS115 hypothetical protein XP_002491016.1 245149 R 644223 CDS PAS_chr2-1_0131 254567814 8198527 246793..247311 1 NC_012964.1 hypothetical protein 247311 8198527 PAS_chr2-1_0131 Pichia pastoris GS115 hypothetical protein XP_002491017.1 246793 D 644223 CDS PAS_chr2-1_0132 254567816 8198528 complement(247387..250269) 1 NC_012964.1 hypothetical protein 250269 8198528 PAS_chr2-1_0132 Pichia pastoris GS115 hypothetical protein XP_002491018.1 247387 R 644223 CDS PAS_chr2-1_0133 254567818 8198608 complement(join(250525..250893,250962..251103,251180..251403)) 1 NC_012964.1 hypothetical protein 251403 8198608 PAS_chr2-1_0133 Pichia pastoris GS115 hypothetical protein XP_002491019.1 250525 R 644223 CDS PAS_chr2-1_0134 254567820 8198529 complement(251553..251921) 1 NC_012964.1 hypothetical protein 251921 8198529 PAS_chr2-1_0134 Pichia pastoris GS115 hypothetical protein XP_002491020.1 251553 R 644223 CDS PAS_chr2-1_0813 254567822 8198450 complement(252727..255516) 1 NC_012964.1 Cu(+2)-transporting P-type ATPase, required for export of copper from the cytosol into an extracytos 255516 8198450 PAS_chr2-1_0813 Pichia pastoris GS115 Cu(+2)-transporting P-type ATPase, required for export of copper from the cytosol into an extracytos XP_002491021.1 252727 R 644223 CDS PAS_chr2-1_0135 254567824 8198089 256230..257894 1 NC_012964.1 Helix-hairpin-helix protein, involved in DNA repair and replication fork stability 257894 8198089 PAS_chr2-1_0135 Pichia pastoris GS115 Helix-hairpin-helix protein, involved in DNA repair and replication fork stability XP_002491022.1 256230 D 644223 CDS PAS_chr2-1_0136 254567826 8198451 258071..259696 1 NC_012964.1 hypothetical protein 259696 8198451 PAS_chr2-1_0136 Pichia pastoris GS115 hypothetical protein XP_002491023.1 258071 D 644223 CDS PAS_chr2-1_0137 254567828 8198452 complement(join(259820..260768,260875..262673)) 1 NC_012964.1 Nuclear import receptor, mediates the nuclear localization of proteins involved in mRNA-nucleus expo 262673 8198452 PAS_chr2-1_0137 Pichia pastoris GS115 Nuclear import receptor, mediates the nuclear localization of proteins involved in mRNA-nucleus expo XP_002491024.1 259820 R 644223 CDS PAS_chr2-1_0138 254567830 8198453 join(262820..262846,262920..263159) 1 NC_012964.1 Core Sm protein Sm E 263159 8198453 PAS_chr2-1_0138 Pichia pastoris GS115 Core Sm protein Sm E XP_002491025.1 262820 D 644223 CDS PAS_chr2-1_0139 254567832 8198454 complement(263321..264184) 1 NC_012964.1 Mitochondrial ribosomal protein of the small subunit 264184 8198454 PAS_chr2-1_0139 Pichia pastoris GS115 Mitochondrial ribosomal protein of the small subunit XP_002491026.1 263321 R 644223 CDS PAS_chr2-1_0140 254567834 8198455 complement(264385..266421) 1 NC_012964.1 ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding i 266421 8198455 PAS_chr2-1_0140 Pichia pastoris GS115 ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding i XP_002491027.1 264385 R 644223 CDS PAS_chr2-1_0141 254567836 8198456 complement(266745..268784) 1 NC_012964.1 Member of the ChAPs family (Chs5p-Arf1p-binding proteins: Bch1p, Bch2p, Bud7p, Chs6p), that forms th 268784 8198456 PAS_chr2-1_0141 Pichia pastoris GS115 Member of the ChAPs family (Chs5p-Arf1p-binding proteins: Bch1p, Bch2p, Bud7p, Chs6p), that forms th XP_002491028.1 266745 R 644223 CDS PAS_chr2-1_0142 254567838 8198457 complement(269079..269540) 1 NC_012964.1 Subunit (17 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation 269540 8198457 PAS_chr2-1_0142 Pichia pastoris GS115 Subunit (17 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation XP_002491029.1 269079 R 644223 CDS PAS_chr2-1_0143 254567840 8198458 269892..270434 1 NC_012964.1 Conserved protein of the mitochondrial matrix, performs a scaffolding function during assembly of ir 270434 8198458 PAS_chr2-1_0143 Pichia pastoris GS115 Conserved protein of the mitochondrial matrix, performs a scaffolding function during assembly of ir XP_002491030.1 269892 D 644223 CDS PAS_chr2-1_0144 254567842 8198459 complement(270685..271332) 1 NC_012964.1 Subunit of the RNA polymerase II mediator complex 271332 8198459 PAS_chr2-1_0144 Pichia pastoris GS115 Subunit of the RNA polymerase II mediator complex XP_002491031.1 270685 R 644223 CDS PAS_chr2-1_0145 254567844 8198460 271459..271860 1 NC_012964.1 Protein of unknown function, required for survival upon exposure to K1 killer toxin 271860 8198460 PAS_chr2-1_0145 Pichia pastoris GS115 Protein of unknown function, required for survival upon exposure to K1 killer toxin XP_002491032.1 271459 D 644223 CDS PAS_chr2-1_0146 254567846 8198530 complement(271895..272395) 1 NC_012964.1 Dinucleoside triphosphate hydrolase 272395 8198530 PAS_chr2-1_0146 Pichia pastoris GS115 Dinucleoside triphosphate hydrolase XP_002491033.1 271895 R 644223 CDS PAS_chr2-1_0147 254567848 8198531 272450..272668 1 NC_012964.1 hypothetical protein 272668 8198531 PAS_chr2-1_0147 Pichia pastoris GS115 hypothetical protein XP_002491034.1 272450 D 644223 CDS PAS_chr2-1_0148 254567850 8198532 complement(272839..273009) 1 NC_012964.1 hypothetical protein 273009 8198532 PAS_chr2-1_0148 Pichia pastoris GS115 hypothetical protein XP_002491035.1 272839 R 644223 CDS PAS_chr2-1_0149 254567852 8198533 273138..275783 1 NC_012964.1 Protein involved in DNA replication 275783 8198533 PAS_chr2-1_0149 Pichia pastoris GS115 Protein involved in DNA replication XP_002491036.1 273138 D 644223 CDS PAS_chr2-1_0150 254567854 8198534 275961..276500 1 NC_012964.1 Flavin-linked sulfhydryl oxidase of the mitochondrial intermembrane space (IMS), oxidizes Mia40p as 276500 8198534 PAS_chr2-1_0150 Pichia pastoris GS115 Flavin-linked sulfhydryl oxidase of the mitochondrial intermembrane space (IMS), oxidizes Mia40p as XP_002491037.1 275961 D 644223 CDS PAS_chr2-1_0151 254567856 8198535 complement(276571..278661) 1 NC_012964.1 hypothetical protein 278661 8198535 PAS_chr2-1_0151 Pichia pastoris GS115 hypothetical protein XP_002491038.1 276571 R 644223 CDS PAS_chr2-1_0152 254567858 8198536 complement(278789..279775) 1 NC_012964.1 Protein that acts together with Ula1p to activate Rub1p before its conjugation to proteins (neddylat 279775 8198536 PAS_chr2-1_0152 Pichia pastoris GS115 Protein that acts together with Ula1p to activate Rub1p before its conjugation to proteins (neddylat XP_002491039.1 278789 R 644223 CDS PAS_chr2-1_0153 254567860 8198537 complement(279913..281136) 1 NC_012964.1 Protein that stimulates strand exchange by facilitating Rad51p binding to single-stranded DNA 281136 8198537 PAS_chr2-1_0153 Pichia pastoris GS115 Protein that stimulates strand exchange by facilitating Rad51p binding to single-stranded DNA XP_002491040.1 279913 R 644223 CDS PAS_chr2-1_0154 254567862 8198538 281363..283225 1 NC_012964.1 Nuclear envelope protein with multiple putative transmembrane domains 283225 8198538 PAS_chr2-1_0154 Pichia pastoris GS115 Nuclear envelope protein with multiple putative transmembrane domains XP_002491041.1 281363 D 644223 CDS PAS_chr2-1_0156 254567864 8198539 complement(283299..285140) 1 NC_012964.1 Endosomal Na+/H+ exchanger, required for intracellular sequestration of Na+ 285140 8198539 PAS_chr2-1_0156 Pichia pastoris GS115 Endosomal Na+/H+ exchanger, required for intracellular sequestration of Na+ XP_002491042.1 283299 R 644223 CDS PAS_chr2-1_0157 254567866 8198540 285505..286110 1 NC_012964.1 hypothetical protein 286110 8198540 PAS_chr2-1_0157 Pichia pastoris GS115 hypothetical protein XP_002491043.1 285505 D 644223 CDS PAS_chr2-1_0158 254567868 8198541 complement(286140..287756) 1 NC_012964.1 Anthranilate synthase, catalyzes the initial step of tryptophan biosynthesis, forms multifunctional 287756 8198541 PAS_chr2-1_0158 Pichia pastoris GS115 Anthranilate synthase, catalyzes the initial step of tryptophan biosynthesis, forms multifunctional XP_002491044.1 286140 R 644223 CDS PAS_chr2-1_0159 254567870 8198542 complement(join(287909..288466,288537..288983)) 1 NC_012964.1 UBX (ubiquitin regulatory X) domain-containing protein that regulates Glc7p phosphatase activity and 288983 8198542 PAS_chr2-1_0159 Pichia pastoris GS115 UBX (ubiquitin regulatory X) domain-containing protein that regulates Glc7p phosphatase activity and XP_002491045.1 287909 R 644223 CDS PAS_chr2-1_0160 254567872 8198543 complement(289344..291650) 1 NC_012964.1 Cobalamin-independent methionine synthase, involved in amino acid biosynthesis 291650 8198543 PAS_chr2-1_0160 Pichia pastoris GS115 Cobalamin-independent methionine synthase, involved in amino acid biosynthesis XP_002491046.1 289344 R 644223 CDS PAS_chr2-1_0161 254567874 8198544 292075..292746 1 NC_012964.1 v-SNARE protein involved in Golgi transport, homolog of the mammalian protein GOS-28/GS28 292746 8198544 PAS_chr2-1_0161 Pichia pastoris GS115 v-SNARE protein involved in Golgi transport, homolog of the mammalian protein GOS-28/GS28 XP_002491047.1 292075 D 644223 CDS PAS_chr2-1_0162 254567876 8198545 293135..296476 1 NC_012964.1 Histidine kinase osmosensor that regulates a MAP kinase cascade 296476 8198545 PAS_chr2-1_0162 Pichia pastoris GS115 Histidine kinase osmosensor that regulates a MAP kinase cascade XP_002491048.1 293135 D 644223 CDS PAS_chr2-1_0163 254567878 8198546 complement(296563..299844) 1 NC_012964.1 Catalytic subunit of DNA polymerase delta 299844 8198546 PAS_chr2-1_0163 Pichia pastoris GS115 Catalytic subunit of DNA polymerase delta XP_002491049.1 296563 R 644223 CDS PAS_chr2-1_0164 254567880 8198547 300074..303043 1 NC_012964.1 Ubiquitin-conjugating enzyme (E4), elongates polyubiquitin chains on substrate proteins 303043 8198547 PAS_chr2-1_0164 Pichia pastoris GS115 Ubiquitin-conjugating enzyme (E4), elongates polyubiquitin chains on substrate proteins XP_002491050.1 300074 D 644223 CDS PAS_chr2-1_0165 254567882 8198548 join(303127..303144,303212..305095) 1 NC_012964.1 Protein required for mismatch repair in mitosis and meiosis as well as crossing over during meiosis 305095 8198548 PAS_chr2-1_0165 Pichia pastoris GS115 Protein required for mismatch repair in mitosis and meiosis as well as crossing over during meiosis XP_002491051.1 303127 D 644223 CDS PAS_chr2-1_0166 254567884 8198549 complement(305194..306237) 1 NC_012964.1 Predicted transporter of the mitochondrial inner membrane 306237 8198549 PAS_chr2-1_0166 Pichia pastoris GS115 Predicted transporter of the mitochondrial inner membrane XP_002491052.1 305194 R 644223 CDS PAS_chr2-1_0167 254567886 8198550 306431..307552 1 NC_012964.1 Putative metalloprotease, similar to O-sialoglycoprotein metallopeptidase from P. haemolytica 307552 8198550 PAS_chr2-1_0167 Pichia pastoris GS115 Putative metalloprotease, similar to O-sialoglycoprotein metallopeptidase from P. haemolytica XP_002491053.1 306431 D 644223 CDS PAS_chr2-1_0814 254567888 8198551 complement(307549..308694) 1 NC_012964.1 hypothetical protein 308694 8198551 PAS_chr2-1_0814 Pichia pastoris GS115 hypothetical protein XP_002491054.1 307549 R 644223 CDS PAS_chr2-1_0168 254567890 8198090 complement(308966..311476) 1 NC_012964.1 Protein that is processed in the mitochondrion to yield acetylglutamate kinase and N-acetyl-gamma-gl 311476 8198090 PAS_chr2-1_0168 Pichia pastoris GS115 Protein that is processed in the mitochondrion to yield acetylglutamate kinase and N-acetyl-gamma-gl XP_002491055.1 308966 R 644223 CDS PAS_chr2-1_0169 254567892 8198552 join(311994..312043,312094..312517) 1 NC_012964.1 Mitochondrial outer membrane protein involved in membrane fission, required for localization of Dnm1 312517 8198552 PAS_chr2-1_0169 Pichia pastoris GS115 Mitochondrial outer membrane protein involved in membrane fission, required for localization of Dnm1 XP_002491056.1 311994 D 644223 CDS PAS_chr2-1_0170 254567894 8198553 313058..314152 1 NC_012964.1 tRNA-specific adenosine deaminase, deaminates adenosine-37 to inosine in tRNA-Ala 314152 8198553 PAS_chr2-1_0170 Pichia pastoris GS115 tRNA-specific adenosine deaminase, deaminates adenosine-37 to inosine in tRNA-Ala XP_002491057.1 313058 D 644223 CDS PAS_chr2-1_0171 254567896 8198554 complement(314197..314685) 1 NC_012964.1 Putative protein of unknown function 314685 8198554 PAS_chr2-1_0171 Pichia pastoris GS115 Putative protein of unknown function XP_002491058.1 314197 R 644223 CDS PAS_chr2-1_0172 254567898 8198555 315460..320463 1 NC_012964.1 hypothetical protein 320463 8198555 PAS_chr2-1_0172 Pichia pastoris GS115 hypothetical protein XP_002491059.1 315460 D 644223 CDS PAS_chr2-1_0173 254567900 8198556 321077..323644 1 NC_012964.1 Non-essential glycogen phosphorylase required for the mobilization of glycogen, activity is regulate 323644 8198556 PAS_chr2-1_0173 Pichia pastoris GS115 Non-essential glycogen phosphorylase required for the mobilization of glycogen, activity is regulate XP_002491060.1 321077 D 644223 CDS PAS_chr2-1_0174 254567902 8198557 323932..325803 1 NC_012964.1 Protease involved in the processing of killer toxin and alpha factor precursor 325803 8198557 PAS_chr2-1_0174 Pichia pastoris GS115 Protease involved in the processing of killer toxin and alpha factor precursor XP_002491061.1 323932 D 644223 CDS PAS_chr2-1_0175 254567904 8198558 326075..326635 1 NC_012964.1 hypothetical protein 326635 8198558 PAS_chr2-1_0175 Pichia pastoris GS115 hypothetical protein XP_002491062.1 326075 D 644223 CDS PAS_chr2-1_0176 254567906 8198559 complement(326711..328273) 1 NC_012964.1 ATP (CTP):tRNA-specific tRNA nucleotidyltransferase 328273 8198559 PAS_chr2-1_0176 Pichia pastoris GS115 ATP (CTP):tRNA-specific tRNA nucleotidyltransferase XP_002491063.1 326711 R 644223 CDS PAS_chr2-1_0815 254567908 8198560 complement(328343..329179) 1 NC_012964.1 hypothetical protein 329179 8198560 PAS_chr2-1_0815 Pichia pastoris GS115 hypothetical protein XP_002491064.1 328343 R 644223 CDS PAS_chr2-1_0177 254567910 8198091 329702..330799 1 NC_012964.1 hypothetical protein 330799 8198091 PAS_chr2-1_0177 Pichia pastoris GS115 hypothetical protein XP_002491065.1 329702 D 644223 CDS PAS_chr2-1_0178 254567912 8198561 complement(330889..334098) 1 NC_012964.1 Polyphosphatidylinositol phosphatase, dephosphorylates multiple phosphatidylinositols 334098 8198561 PAS_chr2-1_0178 Pichia pastoris GS115 Polyphosphatidylinositol phosphatase, dephosphorylates multiple phosphatidylinositols XP_002491066.1 330889 R 644223 CDS PAS_chr2-1_0816 254567914 8198562 complement(334877..337441) 1 NC_012964.1 hypothetical protein 337441 8198562 PAS_chr2-1_0816 Pichia pastoris GS115 hypothetical protein XP_002491067.1 334877 R 644223 CDS PAS_chr2-1_0179 254567916 8198092 338334..339011 1 NC_012964.1 S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family 339011 8198092 PAS_chr2-1_0179 Pichia pastoris GS115 S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family XP_002491068.1 338334 D 644223 CDS PAS_chr2-1_0180 254567918 8198563 complement(join(338998..340789,340887..343352,343412..344025)) 1 NC_012964.1 Protein of unknown function, essential for viability 344025 8198563 PAS_chr2-1_0180 Pichia pastoris GS115 Protein of unknown function, essential for viability XP_002491069.1 338998 R 644223 CDS PAS_chr2-1_0182 254567920 8198564 344159..344926 1 NC_012964.1 Component of the ESCRT-I complex (Stp22p, Srn2p, Vps28p, and Mvb12p), which is involved in ubiquitin 344926 8198564 PAS_chr2-1_0182 Pichia pastoris GS115 Component of the ESCRT-I complex (Stp22p, Srn2p, Vps28p, and Mvb12p), which is involved in ubiquitin XP_002491070.1 344159 D 644223 CDS PAS_chr2-1_0183 254567922 8198565 complement(344923..345594) 1 NC_012964.1 Acyl-protein thioesterase responsible for depalmitoylation of Gpa1p 345594 8198565 PAS_chr2-1_0183 Pichia pastoris GS115 Acyl-protein thioesterase responsible for depalmitoylation of Gpa1p XP_002491071.1 344923 R 644223 CDS PAS_chr2-1_0184 254567924 8198566 345726..346304 1 NC_012964.1 hypothetical protein 346304 8198566 PAS_chr2-1_0184 Pichia pastoris GS115 hypothetical protein XP_002491072.1 345726 D 644223 CDS PAS_chr2-1_0185 254567926 8198567 complement(346371..348464) 1 NC_012964.1 Protein subunit of mitochondrial RNase P, has roles in nuclear transcription, cytoplasmic and mitoch 348464 8198567 PAS_chr2-1_0185 Pichia pastoris GS115 Protein subunit of mitochondrial RNase P, has roles in nuclear transcription, cytoplasmic and mitoch XP_002491073.1 346371 R 644223 CDS PAS_chr2-1_0186 254567928 8198568 join(349435..349459,349563..350884) 1 NC_012964.1 Alpha-tubulin 350884 8198568 PAS_chr2-1_0186 Pichia pastoris GS115 Alpha-tubulin XP_002491074.1 349435 D 644223 CDS PAS_chr2-1_0187 254567930 8198569 351089..351808 1 NC_012964.1 hypothetical protein 351808 8198569 PAS_chr2-1_0187 Pichia pastoris GS115 hypothetical protein XP_002491075.1 351089 D 644223 CDS PAS_chr2-1_0188 254567932 8198570 join(351947..351990,352052..352760) 1 NC_012964.1 Alpha 2 subunit of the 20S proteasome 352760 8198570 PAS_chr2-1_0188 Pichia pastoris GS115 Alpha 2 subunit of the 20S proteasome XP_002491076.1 351947 D 644223 CDS PAS_chr2-1_0189 254567934 8198571 complement(352773..353555) 1 NC_012964.1 Protein required for respiratory growth and stability of the mitochondrial genome 353555 8198571 PAS_chr2-1_0189 Pichia pastoris GS115 Protein required for respiratory growth and stability of the mitochondrial genome XP_002491077.1 352773 R 644223 CDS PAS_chr2-1_0190 254567936 8198572 353842..357573 1 NC_012964.1 Putative ABC transporter 357573 8198572 PAS_chr2-1_0190 Pichia pastoris GS115 Putative ABC transporter XP_002491078.1 353842 D 644223 CDS PAS_chr2-1_0191 254567938 8198573 join(357778..357834,357947..359236) 1 NC_012964.1 3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) synthase, catalyzes the formation of HMG-CoA from acetyl-Co 359236 8198573 PAS_chr2-1_0191 Pichia pastoris GS115 3-hydroxy-3-methylglutaryl-CoA (HMG-CoA) synthase, catalyzes the formation of HMG-CoA from acetyl-Co XP_002491079.1 357778 D 644223 CDS PAS_chr2-1_0192 254567940 8198574 complement(359322..361040) 1 NC_012964.1 hypothetical protein 361040 8198574 PAS_chr2-1_0192 Pichia pastoris GS115 hypothetical protein XP_002491080.1 359322 R 644223 CDS PAS_chr2-1_0193 254567942 8198575 361644..363335 1 NC_012964.1 Component of the RSC chromatin remodeling complex 363335 8198575 PAS_chr2-1_0193 Pichia pastoris GS115 Component of the RSC chromatin remodeling complex XP_002491081.1 361644 D 644223 CDS PAS_chr2-1_0194 254567944 8198576 complement(join(363389..363831,363879..363894)) 1 NC_012964.1 Subunit of the heterohexameric cochaperone prefoldin complex which binds specifically to cytosolic c 363894 8198576 PAS_chr2-1_0194 Pichia pastoris GS115 Subunit of the heterohexameric cochaperone prefoldin complex which binds specifically to cytosolic c XP_002491082.1 363389 R 644223 CDS PAS_chr2-1_0195 254567946 8198577 363991..364965 1 NC_012964.1 Single-stranded DNA endonuclease (with Rad1p), cleaves single-stranded DNA during nucleotide excisio 364965 8198577 PAS_chr2-1_0195 Pichia pastoris GS115 Single-stranded DNA endonuclease (with Rad1p), cleaves single-stranded DNA during nucleotide excisio XP_002491083.1 363991 D 644223 CDS PAS_chr2-1_0196 254567948 8198578 complement(364969..366051) 1 NC_012964.1 hypothetical protein 366051 8198578 PAS_chr2-1_0196 Pichia pastoris GS115 hypothetical protein XP_002491084.1 364969 R 644223 CDS PAS_chr2-1_0197 254567950 8198579 366517..368091 1 NC_012964.1 D-Arabinono-1,4-lactone oxidase, catalyzes the final step in biosynthesis of D-erythroascorbic acid 368091 8198579 PAS_chr2-1_0197 Pichia pastoris GS115 D-Arabinono-1,4-lactone oxidase, catalyzes the final step in biosynthesis of D-erythroascorbic acid XP_002491085.1 366517 D 644223 CDS PAS_chr2-1_0198 254567952 8198580 join(368807..369535,369607..370068) 1 NC_012964.1 Fe(II)-dependent sulfonate/alpha-ketoglutarate dioxygenase, involved in sulfonate catabolism for use 370068 8198580 PAS_chr2-1_0198 Pichia pastoris GS115 Fe(II)-dependent sulfonate/alpha-ketoglutarate dioxygenase, involved in sulfonate catabolism for use XP_002491086.1 368807 D 644223 CDS PAS_chr2-1_0199 254567954 8198581 371168..372085 1 NC_012964.1 Essential protein required for maturation of Gas1p and Pho8p, proposed to be involved in protein tra 372085 8198581 PAS_chr2-1_0199 Pichia pastoris GS115 Essential protein required for maturation of Gas1p and Pho8p, proposed to be involved in protein tra XP_002491087.1 371168 D 644223 CDS PAS_chr2-1_0200 254567956 8198582 372275..374335 1 NC_012964.1 F-box receptor protein, subunit of the Skp1-Cdc53-F-box receptor (SCF) E3 ubiquitin ligase complex 374335 8198582 PAS_chr2-1_0200 Pichia pastoris GS115 F-box receptor protein, subunit of the Skp1-Cdc53-F-box receptor (SCF) E3 ubiquitin ligase complex XP_002491088.1 372275 D 644223 CDS PAS_chr2-1_0201 254567958 8198583 complement(374370..375155) 1 NC_012964.1 hypothetical protein 375155 8198583 PAS_chr2-1_0201 Pichia pastoris GS115 hypothetical protein XP_002491089.1 374370 R 644223 CDS PAS_chr2-1_0202 254567960 8198584 375923..377083 1 NC_012964.1 S-adenosylmethionine decarboxylase, required for the biosynthesis of spermidine and spermine 377083 8198584 PAS_chr2-1_0202 Pichia pastoris GS115 S-adenosylmethionine decarboxylase, required for the biosynthesis of spermidine and spermine XP_002491090.1 375923 D 644223 CDS PAS_chr2-1_0203 254567962 8198585 complement(377117..379411) 1 NC_012964.1 Phosphotyrosine-specific protein phosphatase involved in the inactivation of mitogen-activated prote 379411 8198585 PAS_chr2-1_0203 Pichia pastoris GS115 Phosphotyrosine-specific protein phosphatase involved in the inactivation of mitogen-activated prote XP_002491091.1 377117 R 644223 CDS PAS_chr2-1_0204 254567964 8198586 complement(380191..381435) 1 NC_012964.1 RNAse 381435 8198586 PAS_chr2-1_0204 Pichia pastoris GS115 RNAse XP_002491092.1 380191 R 644223 CDS PAS_chr2-1_0205 254567966 8198587 join(381807..381945,381993..383332) 1 NC_012964.1 Subunit of the Hat1p-Hat2p histone acetyltransferase complex 383332 8198587 PAS_chr2-1_0205 Pichia pastoris GS115 Subunit of the Hat1p-Hat2p histone acetyltransferase complex XP_002491093.1 381807 D 644223 CDS PAS_chr2-1_0206 254567968 8198588 complement(383381..384529) 1 NC_012964.1 Subunit of COMPASS (Set1C), a complex which methylates histone H3 on lysine 4 and is required in tel 384529 8198588 PAS_chr2-1_0206 Pichia pastoris GS115 Subunit of COMPASS (Set1C), a complex which methylates histone H3 on lysine 4 and is required in tel XP_002491094.1 383381 R 644223 CDS PAS_chr2-1_0207 254567970 8198589 384750..387287 1 NC_012964.1 Mitochondrial GTPase related to dynamin, present in a complex containing Ugo1p and Fzo1p 387287 8198589 PAS_chr2-1_0207 Pichia pastoris GS115 Mitochondrial GTPase related to dynamin, present in a complex containing Ugo1p and Fzo1p XP_002491095.1 384750 D 644223 CDS PAS_chr2-1_0208 254567972 8198590 387451..388338 1 NC_012964.1 Protein of unknown function, localized to the mitochondrial outer membrane 388338 8198590 PAS_chr2-1_0208 Pichia pastoris GS115 Protein of unknown function, localized to the mitochondrial outer membrane XP_002491096.1 387451 D 644223 CDS PAS_chr2-1_0209 254567974 8198591 complement(388384..390708) 1 NC_012964.1 One of two large regulatory subunits of ribonucleotide-diphosphate reductase 390708 8198591 PAS_chr2-1_0209 Pichia pastoris GS115 One of two large regulatory subunits of ribonucleotide-diphosphate reductase XP_002491097.1 388384 R 644223 CDS PAS_chr2-1_0210 254567976 8198592 391953..392399 1 NC_012964.1 hypothetical protein 392399 8198592 PAS_chr2-1_0210 Pichia pastoris GS115 hypothetical protein XP_002491098.1 391953 D 644223 CDS PAS_chr2-1_0211 254567978 8198593 complement(392460..393794) 1 NC_012964.1 Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II 393794 8198593 PAS_chr2-1_0211 Pichia pastoris GS115 Subunit of phosphatidylinositol (PtdIns) 3-kinase complexes I and II XP_002491099.1 392460 R 644223 CDS PAS_chr2-1_0212 254567980 8198594 complement(393967..396336) 1 NC_012964.1 Protein O-mannosyltransferase, transfers mannose residues from dolichyl phosphate-D-mannose to prote 396336 8198594 PAS_chr2-1_0212 Pichia pastoris GS115 Protein O-mannosyltransferase, transfers mannose residues from dolichyl phosphate-D-mannose to prote XP_002491100.1 393967 R 644223 CDS PAS_chr2-1_0213 254567982 8198595 complement(396410..398140) 1 NC_012964.1 hypothetical protein 398140 8198595 PAS_chr2-1_0213 Pichia pastoris GS115 hypothetical protein XP_002491101.1 396410 R 644223 CDS PAS_chr2-1_0214 254567984 8198596 398658..402401 1 NC_012964.1 Mitochondrial protein required for assembly of ubiquinol cytochrome-c reductase complex (cytochrome 402401 8198596 PAS_chr2-1_0214 Pichia pastoris GS115 Mitochondrial protein required for assembly of ubiquinol cytochrome-c reductase complex (cytochrome XP_002491102.1 398658 D 644223 CDS PAS_chr2-1_0817 254567986 8198597 402551..403519 1 NC_012964.1 hypothetical protein 403519 8198597 PAS_chr2-1_0817 Pichia pastoris GS115 hypothetical protein XP_002491103.1 402551 D 644223 CDS PAS_chr2-1_0818 254567988 8198093 403744..404439 1 NC_012964.1 hypothetical protein 404439 8198093 PAS_chr2-1_0818 Pichia pastoris GS115 hypothetical protein XP_002491104.1 403744 D 644223 CDS PAS_chr2-1_0215 254567990 8198094 complement(404484..408575) 1 NC_012964.1 DNA binding protein with similarity to the S. pombe Snt2 protein 408575 8198094 PAS_chr2-1_0215 Pichia pastoris GS115 DNA binding protein with similarity to the S. pombe Snt2 protein XP_002491105.1 404484 R 644223 CDS PAS_chr2-1_0216 254567992 8198598 408874..410301 1 NC_012964.1 Alpha (guanylyltransferase) subunit of the mRNA capping enzyme, a heterodimer (the other subunit is 410301 8198598 PAS_chr2-1_0216 Pichia pastoris GS115 Alpha (guanylyltransferase) subunit of the mRNA capping enzyme, a heterodimer (the other subunit is XP_002491106.1 408874 D 644223 CDS PAS_chr2-1_0217 254567994 8198599 complement(410448..412007) 1 NC_012964.1 Mitochondrial ribosomal protein of the small subunit, has similarity to mammalian apoptosis mediator 412007 8198599 PAS_chr2-1_0217 Pichia pastoris GS115 Mitochondrial ribosomal protein of the small subunit, has similarity to mammalian apoptosis mediator XP_002491107.1 410448 R 644223 CDS PAS_chr2-1_0218 254567996 8198600 complement(join(412670..413062,413158..413169)) 1 NC_012964.1 hypothetical protein 413169 8198600 PAS_chr2-1_0218 Pichia pastoris GS115 hypothetical protein XP_002491108.1 412670 R 644223 CDS PAS_chr2-1_0219 254567998 8198601 414155..415510 1 NC_012964.1 Protein kinase involved in regulating diverse events including vesicular trafficking, DNA repair, an 415510 8198601 PAS_chr2-1_0219 Pichia pastoris GS115 Protein kinase involved in regulating diverse events including vesicular trafficking, DNA repair, an XP_002491109.1 414155 D 644223 CDS PAS_chr2-1_0220 254568000 8198602 complement(416390..419308) 1 NC_012964.1 Karyopherin with a role in the assembly or export of 60S ribosomal subunits 419308 8198602 PAS_chr2-1_0220 Pichia pastoris GS115 Karyopherin with a role in the assembly or export of 60S ribosomal subunits XP_002491110.1 416390 R 644223 CDS PAS_chr2-1_0221 254568002 8198603 complement(419464..420696) 1 NC_012964.1 Nicotinate phosphoribosyltransferase, acts in the salvage pathway of NAD+ biosynthesis 420696 8198603 PAS_chr2-1_0221 Pichia pastoris GS115 Nicotinate phosphoribosyltransferase, acts in the salvage pathway of NAD+ biosynthesis XP_002491111.1 419464 R 644223 CDS PAS_chr2-1_0222 254568004 8198604 complement(421264..423555) 1 NC_012964.1 U3 snoRNP protein, component of the small (ribosomal) subunit (SSU) processosome containing U3 snoRN 423555 8198604 PAS_chr2-1_0222 Pichia pastoris GS115 U3 snoRNP protein, component of the small (ribosomal) subunit (SSU) processosome containing U3 snoRN XP_002491112.1 421264 R 644223 CDS PAS_chr2-1_0223 254568006 8198605 423742..423960 1 NC_012964.1 RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III 423960 8198605 PAS_chr2-1_0223 Pichia pastoris GS115 RNA polymerase subunit ABC10-beta, common to RNA polymerases I, II, and III XP_002491113.1 423742 D 644223 CDS PAS_chr2-1_0224 254568008 8198606 424210..425187 1 NC_012964.1 hypothetical protein 425187 8198606 PAS_chr2-1_0224 Pichia pastoris GS115 hypothetical protein XP_002491114.1 424210 D 644223 CDS PAS_chr2-1_0225 254568010 8198607 complement(425204..426742) 1 NC_012964.1 Zinc cluster transcriptional activator involved in conferring resistance to ketoconazole 426742 8198607 PAS_chr2-1_0225 Pichia pastoris GS115 Zinc cluster transcriptional activator involved in conferring resistance to ketoconazole XP_002491115.1 425204 R 644223 CDS PAS_chr2-1_0226 254568012 8198685 427098..427886 1 NC_012964.1 Mitochondrial inner membrane protein required for delivery of copper to the Cox1p subunit of cytochr 427886 8198685 PAS_chr2-1_0226 Pichia pastoris GS115 Mitochondrial inner membrane protein required for delivery of copper to the Cox1p subunit of cytochr XP_002491116.1 427098 D 644223 CDS PAS_chr2-1_0227 254568014 8198776 complement(427947..430154) 1 NC_012964.1 hypothetical protein 430154 8198776 PAS_chr2-1_0227 Pichia pastoris GS115 hypothetical protein XP_002491117.1 427947 R 644223 CDS PAS_chr2-1_0228 254568016 8198777 complement(430224..432434) 1 NC_012964.1 DNA helicase involved in rDNA replication and Ty1 transposition 432434 8198777 PAS_chr2-1_0228 Pichia pastoris GS115 DNA helicase involved in rDNA replication and Ty1 transposition XP_002491118.1 430224 R 644223 CDS PAS_chr2-1_0229 254568018 8198778 complement(432543..433868) 1 NC_012964.1 Protein binding phosphatidylinositol 3-phosphate, involved in telomere-proximal repression of gene e 433868 8198778 PAS_chr2-1_0229 Pichia pastoris GS115 Protein binding phosphatidylinositol 3-phosphate, involved in telomere-proximal repression of gene e XP_002491119.1 432543 R 644223 CDS PAS_chr2-1_0230 254568020 8198779 435007..435960 1 NC_012964.1 Mitochondrial ribosomal protein of the small subunit 435960 8198779 PAS_chr2-1_0230 Pichia pastoris GS115 Mitochondrial ribosomal protein of the small subunit XP_002491120.1 435007 D 644223 CDS PAS_chr2-1_0231 254568022 8198780 complement(join(436024..437113,437437..437696)) 1 NC_012964.1 Putative protein of unknown function 437696 8198780 PAS_chr2-1_0231 Pichia pastoris GS115 Putative protein of unknown function XP_002491121.1 436024 R 644223 CDS PAS_chr2-1_0232 254568024 8198781 438097..440043 1 NC_012964.1 Cleavage and polyadenylation factor I (CF I) component involved in cleavage and polyadenylation of m 440043 8198781 PAS_chr2-1_0232 Pichia pastoris GS115 Cleavage and polyadenylation factor I (CF I) component involved in cleavage and polyadenylation of m XP_002491122.1 438097 D 644223 CDS PAS_chr2-1_0233 254568026 8198782 complement(440217..441098) 1 NC_012964.1 Cytoplasmic RNA-binding protein, contains an RNA recognition motif (RRM) 441098 8198782 PAS_chr2-1_0233 Pichia pastoris GS115 Cytoplasmic RNA-binding protein, contains an RNA recognition motif (RRM) XP_002491123.1 440217 R 644223 CDS PAS_chr2-1_0234 254568028 8198783 441282..441959 1 NC_012964.1 Constituent of 66S pre-ribosomal particles, involved in 60S ribosomal subunit biogenesis 441959 8198783 PAS_chr2-1_0234 Pichia pastoris GS115 Constituent of 66S pre-ribosomal particles, involved in 60S ribosomal subunit biogenesis XP_002491124.1 441282 D 644223 CDS PAS_chr2-1_0235 254568030 8198784 442707..444437 1 NC_012964.1 Na+/Pi cotransporter, active in early growth phase 444437 8198784 PAS_chr2-1_0235 Pichia pastoris GS115 Na+/Pi cotransporter, active in early growth phase XP_002491125.1 442707 D 644223 CDS PAS_chr2-1_0236 254568032 8198785 444624..445025 1 NC_012964.1 Sulfiredoxin, contributes to oxidative stress resistance by reducing cysteine-sulfinic acid groups i 445025 8198785 PAS_chr2-1_0236 Pichia pastoris GS115 Sulfiredoxin, contributes to oxidative stress resistance by reducing cysteine-sulfinic acid groups i XP_002491126.1 444624 D 644223 CDS PAS_chr2-1_0237 254568034 8198786 complement(445015..445986) 1 NC_012964.1 Putative protein of unknown function 445986 8198786 PAS_chr2-1_0237 Pichia pastoris GS115 Putative protein of unknown function XP_002491127.1 445015 R 644223 CDS PAS_chr2-1_0238 254568036 8198787 446662..447666 1 NC_012964.1 Mitochondrial malate dehydrogenase, catalyzes interconversion of malate and oxaloacetate 447666 8198787 PAS_chr2-1_0238 Pichia pastoris GS115 Mitochondrial malate dehydrogenase, catalyzes interconversion of malate and oxaloacetate XP_002491128.1 446662 D 644223 CDS PAS_chr2-1_0819 254568038 8198788 448275..449840 1 NC_012964.1 hypothetical protein 449840 8198788 PAS_chr2-1_0819 Pichia pastoris GS115 hypothetical protein XP_002491129.1 448275 D 644223 CDS PAS_chr2-1_0239 254568040 8198095 complement(449957..450454) 1 NC_012964.1 Integral membrane protein localized to late Golgi vesicles along with the v-SNARE Tlg2p 450454 8198095 PAS_chr2-1_0239 Pichia pastoris GS115 Integral membrane protein localized to late Golgi vesicles along with the v-SNARE Tlg2p XP_002491130.1 449957 R 644223 CDS PAS_chr2-1_0240 254568042 8198789 450719..452740 1 NC_012964.1 hypothetical protein 452740 8198789 PAS_chr2-1_0240 Pichia pastoris GS115 hypothetical protein XP_002491131.1 450719 D 644223 CDS PAS_chr2-1_0241 254568044 8198790 complement(452768..454573) 1 NC_012964.1 Component of a complex containing the Tor2p kinase and other proteins, which may have a role in regu 454573 8198790 PAS_chr2-1_0241 Pichia pastoris GS115 Component of a complex containing the Tor2p kinase and other proteins, which may have a role in regu XP_002491132.1 452768 R 644223 CDS PAS_chr2-1_0242 254568046 8198791 complement(454732..456021) 1 NC_012964.1 Putative protein of unknown function 456021 8198791 PAS_chr2-1_0242 Pichia pastoris GS115 Putative protein of unknown function XP_002491133.1 454732 R 644223 CDS PAS_chr2-1_0243 254568048 8198792 456146..457477 1 NC_012964.1 UBX (ubiquitin regulatory X) domain-containing protein that interacts with Cdc48p 457477 8198792 PAS_chr2-1_0243 Pichia pastoris GS115 UBX (ubiquitin regulatory X) domain-containing protein that interacts with Cdc48p XP_002491134.1 456146 D 644223 CDS PAS_chr2-1_0820 254568050 8198793 457588..459966 1 NC_012964.1 hypothetical protein 459966 8198793 PAS_chr2-1_0820 Pichia pastoris GS115 hypothetical protein XP_002491135.1 457588 D 644223 CDS PAS_chr2-1_0244 254568052 8198096 460074..462425 1 NC_012964.1 Mitochondrial translation initiation factor 2 462425 8198096 PAS_chr2-1_0244 Pichia pastoris GS115 Mitochondrial translation initiation factor 2 XP_002491136.1 460074 D 644223 CDS PAS_chr2-1_0245 254568054 8198794 complement(join(462568..463782,463843..463860)) 1 NC_012964.1 Essential protein, constituent of 66S pre-ribosomal particles 463860 8198794 PAS_chr2-1_0245 Pichia pastoris GS115 Essential protein, constituent of 66S pre-ribosomal particles XP_002491137.1 462568 R 644223 CDS PAS_chr2-1_0246 254568056 8198795 464078..465238 1 NC_012964.1 Subunit C of the eight-subunit V1 peripheral membrane domain of vacuolar H+-ATPase (V-ATPase) 465238 8198795 PAS_chr2-1_0246 Pichia pastoris GS115 Subunit C of the eight-subunit V1 peripheral membrane domain of vacuolar H+-ATPase (V-ATPase) XP_002491138.1 464078 D 644223 CDS PAS_chr2-1_0247 254568058 8198796 465428..467215 1 NC_012964.1 Kinesin-related motor protein involved in mitotic spindle positioning 467215 8198796 PAS_chr2-1_0247 Pichia pastoris GS115 Kinesin-related motor protein involved in mitotic spindle positioning XP_002491139.1 465428 D 644223 CDS PAS_chr2-1_0248 254568060 8198797 complement(467254..468543) 1 NC_012964.1 Catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme 468543 8198797 PAS_chr2-1_0248 Pichia pastoris GS115 Catalytic subunit of Nem1p-Spo7p phosphatase holoenzyme XP_002491140.1 467254 R 644223 CDS PAS_chr2-1_0249 254568062 8198798 469206..470018 1 NC_012964.1 hypothetical protein, peroxisomal 2,4-dienoyl-CoA reductase 470018 8198798 PAS_chr2-1_0249 Pichia pastoris GS115 hypothetical protein, peroxisomal 2,4-dienoyl-CoA reductase XP_002491141.1 469206 D 644223 CDS PAS_chr2-1_0250 254568064 8198799 complement(470086..471573) 1 NC_012964.1 hypothetical protein 471573 8198799 PAS_chr2-1_0250 Pichia pastoris GS115 hypothetical protein XP_002491142.1 470086 R 644223 CDS PAS_chr2-1_0251 254568066 8198800 complement(472242..472952) 1 NC_012964.1 N alpha-acetyl-transferase, involved in acetylation of the N-terminal residues of histones H4 and H2 472952 8198800 PAS_chr2-1_0251 Pichia pastoris GS115 N alpha-acetyl-transferase, involved in acetylation of the N-terminal residues of histones H4 and H2 XP_002491143.1 472242 R 644223 CDS PAS_chr2-1_0252 254568068 8198801 complement(473174..474193) 1 NC_012964.1 Putative protein of unknown function 474193 8198801 PAS_chr2-1_0252 Pichia pastoris GS115 Putative protein of unknown function XP_002491144.1 473174 R 644223 CDS PAS_chr2-1_0253 254568070 8198802 475115..475798 1 NC_012964.1 hypothetical protein 475798 8198802 PAS_chr2-1_0253 Pichia pastoris GS115 hypothetical protein XP_002491145.1 475115 D 644223 CDS PAS_chr2-1_0254 254568072 8198803 complement(475856..477196) 1 NC_012964.1 hypothetical protein 477196 8198803 PAS_chr2-1_0254 Pichia pastoris GS115 hypothetical protein XP_002491146.1 475856 R 644223 CDS PAS_chr2-1_0255 254568074 8198804 complement(477349..479547) 1 NC_012964.1 Protein of unknown function involved in maintenance of proper telomere length 479547 8198804 PAS_chr2-1_0255 Pichia pastoris GS115 Protein of unknown function involved in maintenance of proper telomere length XP_002491147.1 477349 R 644223 CDS PAS_chr2-1_0256 254568076 8198805 480498..482750 1 NC_012964.1 Protein O-mannosyltransferase, transfers mannose residues from dolichyl phosphate-D-mannose to prote 482750 8198805 PAS_chr2-1_0256 Pichia pastoris GS115 Protein O-mannosyltransferase, transfers mannose residues from dolichyl phosphate-D-mannose to prote XP_002491148.1 480498 D 644223 CDS PAS_chr2-1_0257 254568078 8198806 482906..484210 1 NC_012964.1 Nucleoside transporter with broad nucleoside selectivity 484210 8198806 PAS_chr2-1_0257 Pichia pastoris GS115 Nucleoside transporter with broad nucleoside selectivity XP_002491149.1 482906 D 644223 CDS PAS_chr2-1_0258 254568080 8198807 484340..484939 1 NC_012964.1 Protein required for maturation of mitochondrial and cytosolic Fe/S proteins, localizes to the mitoc 484939 8198807 PAS_chr2-1_0258 Pichia pastoris GS115 Protein required for maturation of mitochondrial and cytosolic Fe/S proteins, localizes to the mitoc XP_002491150.1 484340 D 644223 CDS PAS_chr2-1_0259 254568082 8198808 complement(484926..485777) 1 NC_012964.1 hypothetical protein 485777 8198808 PAS_chr2-1_0259 Pichia pastoris GS115 hypothetical protein XP_002491151.1 484926 R 644223 CDS PAS_chr2-1_0260 254568084 8198809 join(485907..487437,487502..489342) 1 NC_012964.1 hypothetical protein 489342 8198809 PAS_chr2-1_0260 Pichia pastoris GS115 hypothetical protein XP_002491152.1 485907 D 644223 CDS PAS_chr2-1_0261 254568086 8198810 489797..491524 1 NC_012964.1 Activator of Chs3p (chitin synthase III), recruits Chs3p to the bud neck via interaction with Bni4p 491524 8198810 PAS_chr2-1_0261 Pichia pastoris GS115 Activator of Chs3p (chitin synthase III), recruits Chs3p to the bud neck via interaction with Bni4p XP_002491153.1 489797 D 644223 CDS PAS_chr2-1_0262 254568088 8198811 complement(491647..493602) 1 NC_012964.1 hypothetical protein 493602 8198811 PAS_chr2-1_0262 Pichia pastoris GS115 hypothetical protein XP_002491154.1 491647 R 644223 CDS PAS_chr2-1_0263 254568090 8198812 494748..500015 1 NC_012964.1 Catalytic subunit of 1,3-beta-D-glucan synthase 500015 8198812 PAS_chr2-1_0263 Pichia pastoris GS115 Catalytic subunit of 1,3-beta-D-glucan synthase XP_002491155.1 494748 D 644223 CDS PAS_chr2-1_0264 254568092 8198813 complement(500020..500907) 1 NC_012964.1 Mitochondrial outer membrane protein with similarity to Tom70p 500907 8198813 PAS_chr2-1_0264 Pichia pastoris GS115 Mitochondrial outer membrane protein with similarity to Tom70p XP_002491156.1 500020 R 644223 CDS PAS_chr2-1_0265 254568094 8198814 501107..502003 1 NC_012964.1 Protein that inhibits activation of Gcn2p, an eIF2 alpha subunit protein kinase 502003 8198814 PAS_chr2-1_0265 Pichia pastoris GS115 Protein that inhibits activation of Gcn2p, an eIF2 alpha subunit protein kinase XP_002491157.1 501107 D 644223 CDS PAS_chr2-1_0266 254568096 8198815 complement(join(502051..502461,502549..502590)) 1 NC_012964.1 hypothetical protein 502590 8198815 PAS_chr2-1_0266 Pichia pastoris GS115 hypothetical protein XP_002491158.1 502051 R 644223 CDS PAS_chr2-1_0267 254568098 8198816 502751..505384 1 NC_012964.1 Conserved 90S pre-ribosomal component essential for proper endonucleolytic cleavage of the 35 S rRNA 505384 8198816 PAS_chr2-1_0267 Pichia pastoris GS115 Conserved 90S pre-ribosomal component essential for proper endonucleolytic cleavage of the 35 S rRNA XP_002491159.1 502751 D 644223 CDS PAS_chr2-1_0268 254568100 8198817 505500..507026 1 NC_012964.1 Essential protein of unknown function 507026 8198817 PAS_chr2-1_0268 Pichia pastoris GS115 Essential protein of unknown function XP_002491160.1 505500 D 644223 CDS PAS_chr2-1_0269 254568102 8198818 507151..508659 1 NC_012964.1 Threonine synthase, conserved protein that catalyzes formation of threonine from 0-phosphohomoserine 508659 8198818 PAS_chr2-1_0269 Pichia pastoris GS115 Threonine synthase, conserved protein that catalyzes formation of threonine from 0-phosphohomoserine XP_002491161.1 507151 D 644223 CDS PAS_chr2-1_0270 254568104 8198819 complement(508992..509882) 1 NC_012964.1 Plasma membrane protein with roles in the uptake of protoprophyrin IX and the efflux of heme 509882 8198819 PAS_chr2-1_0270 Pichia pastoris GS115 Plasma membrane protein with roles in the uptake of protoprophyrin IX and the efflux of heme XP_002491162.1 508992 R 644223 CDS PAS_chr2-1_0821 254568106 8198820 511580..512968 1 NC_012964.1 hypothetical protein 512968 8198820 PAS_chr2-1_0821 Pichia pastoris GS115 hypothetical protein XP_002491163.1 511580 D 644223 CDS PAS_chr2-1_0822 254568108 8198097 513024..513314 1 NC_012964.1 hypothetical protein 513314 8198097 PAS_chr2-1_0822 Pichia pastoris GS115 hypothetical protein XP_002491164.1 513024 D 644223 CDS PAS_chr2-1_0271 254568110 8198098 513445..514629 1 NC_012964.1 Subunit of the Hat1p-Hat2p histone acetyltransferase complex 514629 8198098 PAS_chr2-1_0271 Pichia pastoris GS115 Subunit of the Hat1p-Hat2p histone acetyltransferase complex XP_002491165.1 513445 D 644223 CDS PAS_chr2-1_0272 254568112 8198821 514834..515574 1 NC_012964.1 hypothetical protein 515574 8198821 PAS_chr2-1_0272 Pichia pastoris GS115 hypothetical protein XP_002491166.1 514834 D 644223 CDS PAS_chr2-1_0273 254568114 8198822 515647..516558 1 NC_012964.1 Protein involved in bud-site selection 516558 8198822 PAS_chr2-1_0273 Pichia pastoris GS115 Protein involved in bud-site selection XP_002491167.1 515647 D 644223 CDS PAS_chr2-1_0274 254568116 8198823 complement(516567..517568) 1 NC_012964.1 Protein involved in postreplication repair 517568 8198823 PAS_chr2-1_0274 Pichia pastoris GS115 Protein involved in postreplication repair XP_002491168.1 516567 R 644223 CDS PAS_chr2-1_0275 254568118 8198824 517738..518319 1 NC_012964.1 Subunit of the RNA polymerase II mediator complex 518319 8198824 PAS_chr2-1_0275 Pichia pastoris GS115 Subunit of the RNA polymerase II mediator complex XP_002491169.1 517738 D 644223 CDS PAS_chr2-1_0276 254568120 8198825 complement(518367..520607) 1 NC_012964.1 hypothetical protein 520607 8198825 PAS_chr2-1_0276 Pichia pastoris GS115 hypothetical protein XP_002491170.1 518367 R 644223 CDS PAS_chr2-1_0277 254568122 8198826 join(520940..520957,521023..521727) 1 NC_012964.1 TFIIA large subunit 521727 8198826 PAS_chr2-1_0277 Pichia pastoris GS115 TFIIA large subunit XP_002491171.1 520940 D 644223 CDS PAS_chr2-1_0278 254568124 8198827 complement(521798..523720) 1 NC_012964.1 hypothetical protein 523720 8198827 PAS_chr2-1_0278 Pichia pastoris GS115 hypothetical protein XP_002491172.1 521798 R 644223 CDS PAS_chr2-1_0279 254568126 8198828 join(524046..524129,524231..525805) 1 NC_012964.1 Triacylglycerol lipase of the lipid particle, responsible for all the TAG lipase activity of the lip 525805 8198828 PAS_chr2-1_0279 Pichia pastoris GS115 Triacylglycerol lipase of the lipid particle, responsible for all the TAG lipase activity of the lip XP_002491173.1 524046 D 644223 CDS PAS_chr2-1_0280 254568128 8198829 526185..530594 1 NC_012964.1 Plasma membrane ATP-binding cassette (ABC) transporter, multidrug transporter involved in multidrug 530594 8198829 PAS_chr2-1_0280 Pichia pastoris GS115 Plasma membrane ATP-binding cassette (ABC) transporter, multidrug transporter involved in multidrug XP_002491174.1 526185 D 644223 CDS PAS_chr2-1_0281 254568130 8198830 complement(530639..531454) 1 NC_012964.1 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA 531454 8198830 PAS_chr2-1_0281 Pichia pastoris GS115 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA XP_002491175.1 530639 R 644223 CDS PAS_chr2-1_0282 254568132 8198831 531600..532940 1 NC_012964.1 Cytosolic ribosome-associated chaperone 532940 8198831 PAS_chr2-1_0282 Pichia pastoris GS115 Cytosolic ribosome-associated chaperone XP_002491176.1 531600 D 644223 CDS PAS_chr2-1_0283 254568134 8198832 complement(533607..534428) 1 NC_012964.1 Putative tRNA acetyltransferase 534428 8198832 PAS_chr2-1_0283 Pichia pastoris GS115 Putative tRNA acetyltransferase XP_002491177.1 533607 R 644223 CDS PAS_chr2-1_0284 254568136 8198833 complement(534510..535766) 1 NC_012964.1 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA 535766 8198833 PAS_chr2-1_0284 Pichia pastoris GS115 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA XP_002491178.1 534510 R 644223 CDS PAS_chr2-1_0285 254568138 8198834 join(535903..537543,537585..538352) 1 NC_012964.1 Mitochondrial integral membrane protein involved in mitochondrial fusion and maintenanceof the mitoc 538352 8198834 PAS_chr2-1_0285 Pichia pastoris GS115 Mitochondrial integral membrane protein involved in mitochondrial fusion and maintenanceof the mitoc XP_002491179.1 535903 D 644223 CDS PAS_chr2-1_0287 254568140 8198835 538527..539465 1 NC_012964.1 Protein localized to COPII-coated vesicles 539465 8198835 PAS_chr2-1_0287 Pichia pastoris GS115 Protein localized to COPII-coated vesicles XP_002491180.1 538527 D 644223 CDS PAS_chr2-1_0288 254568142 8198836 539591..540199 1 NC_012964.1 hypothetical protein 540199 8198836 PAS_chr2-1_0288 Pichia pastoris GS115 hypothetical protein XP_002491181.1 539591 D 644223 CDS PAS_chr2-1_0289 254568144 8198837 complement(540321..540902) 1 NC_012964.1 hypothetical protein 540902 8198837 PAS_chr2-1_0289 Pichia pastoris GS115 hypothetical protein XP_002491182.1 540321 R 644223 CDS PAS_chr2-1_0290 254568146 8198838 complement(541229..541633) 1 NC_012964.1 Late endosomal protein involved in late endosome to vacuole trafficking 541633 8198838 PAS_chr2-1_0290 Pichia pastoris GS115 Late endosomal protein involved in late endosome to vacuole trafficking XP_002491183.1 541229 R 644223 CDS PAS_chr2-1_0291 254568148 8198839 join(541861..541863,541916..542746) 1 NC_012964.1 Alpha 6 subunit of the 20S proteasome 542746 8198839 PAS_chr2-1_0291 Pichia pastoris GS115 Alpha 6 subunit of the 20S proteasome XP_002491184.1 541861 D 644223 CDS PAS_chr2-1_0292 254568150 8198840 complement(542787..543392) 1 NC_012964.1 Ureidoglycolate hydrolase 543392 8198840 PAS_chr2-1_0292 Pichia pastoris GS115 Ureidoglycolate hydrolase XP_002491185.1 542787 R 644223 CDS PAS_chr2-1_0293 254568152 8198841 543803..544252 1 NC_012964.1 hypothetical protein 544252 8198841 PAS_chr2-1_0293 Pichia pastoris GS115 hypothetical protein XP_002491186.1 543803 D 644223 CDS PAS_chr2-1_0294 254568154 8198842 544698..546158 1 NC_012964.1 hypothetical protein 546158 8198842 PAS_chr2-1_0294 Pichia pastoris GS115 hypothetical protein XP_002491187.1 544698 D 644223 CDS PAS_chr2-1_0823 254568156 8198843 546255..546698 1 NC_012964.1 hypothetical protein 546698 8198843 PAS_chr2-1_0823 Pichia pastoris GS115 hypothetical protein XP_002491188.1 546255 D 644223 CDS PAS_chr2-1_0295 254568158 8198099 complement(546769..547137) 1 NC_012964.1 Subunit of both RNase MRP 547137 8198099 PAS_chr2-1_0295 Pichia pastoris GS115 Subunit of both RNase MRP XP_002491189.1 546769 R 644223 CDS PAS_chr2-1_0296 254568160 8198844 547302..547787 1 NC_012964.1 Putative protein of unknown function 547787 8198844 PAS_chr2-1_0296 Pichia pastoris GS115 Putative protein of unknown function XP_002491190.1 547302 D 644223 CDS PAS_chr2-1_0297 254568162 8198845 complement(547796..550216) 1 NC_012964.1 Essential 113kDa subunit of the exocyst complex 550216 8198845 PAS_chr2-1_0297 Pichia pastoris GS115 Essential 113kDa subunit of the exocyst complex XP_002491191.1 547796 R 644223 CDS PAS_chr2-1_0298 254568164 8198846 550402..550995 1 NC_012964.1 hypothetical protein 550995 8198846 PAS_chr2-1_0298 Pichia pastoris GS115 hypothetical protein XP_002491192.1 550402 D 644223 CDS PAS_chr2-1_0824 254568166 8198847 join(551196..551246,551294..551737) 1 NC_012964.1 hypothetical protein 551737 8198847 PAS_chr2-1_0824 Pichia pastoris GS115 hypothetical protein XP_002491193.1 551196 D 644223 CDS PAS_chr2-1_0299 254568168 8198100 complement(551747..553456) 1 NC_012964.1 Protein involved in proteasome-dependent catabolite degradation of fructose-1,6-bisphosphatase 553456 8198100 PAS_chr2-1_0299 Pichia pastoris GS115 Protein involved in proteasome-dependent catabolite degradation of fructose-1,6-bisphosphatase XP_002491194.1 551747 R 644223 CDS PAS_chr2-1_0301 254568170 8198848 554946..561179 1 NC_012964.1 Voltage-gated high-affinity calcium channel 561179 8198848 PAS_chr2-1_0301 Pichia pastoris GS115 Voltage-gated high-affinity calcium channel XP_002491195.1 554946 D 644223 CDS PAS_chr2-1_0302 254568172 8198849 complement(561226..563451) 1 NC_012964.1 Putative catalytic subunit of a class II histone deacetylase complex 563451 8198849 PAS_chr2-1_0302 Pichia pastoris GS115 Putative catalytic subunit of a class II histone deacetylase complex XP_002491196.1 561226 R 644223 CDS PAS_chr2-1_0825 254568174 8198850 complement(563827..566202) 1 NC_012964.1 hypothetical protein 566202 8198850 PAS_chr2-1_0825 Pichia pastoris GS115 hypothetical protein XP_002491197.1 563827 R 644223 CDS PAS_chr2-1_0303 254568176 8198101 566442..567752 1 NC_012964.1 UDP-GlcNAc-binding and catalytic subunit of the enzyme that mediates the first step in GPI synthesis 567752 8198101 PAS_chr2-1_0303 Pichia pastoris GS115 UDP-GlcNAc-binding and catalytic subunit of the enzyme that mediates the first step in GPI synthesis XP_002491198.1 566442 D 644223 CDS PAS_chr2-1_0304 254568178 8198851 complement(570082..572415) 1 NC_012964.1 Kex2 proprotein convertase 572415 8198851 PAS_chr2-1_0304 Pichia pastoris GS115 Kex2 proprotein convertase XP_002491199.1 570082 R 644223 CDS PAS_chr2-1_0305 254568180 8198852 572844..574355 1 NC_012964.1 Nuclear architecture related protein 574355 8198852 PAS_chr2-1_0305 Pichia pastoris GS115 Nuclear architecture related protein XP_002491200.1 572844 D 644223 CDS PAS_chr2-1_0306 254568182 8198927 574659..574865 1 NC_012964.1 hypothetical protein 574865 8198927 PAS_chr2-1_0306 Pichia pastoris GS115 hypothetical protein XP_002491201.1 574659 D 644223 CDS PAS_chr2-1_0307 254568184 8198995 575422..577782 1 NC_012964.1 hypothetical protein 577782 8198995 PAS_chr2-1_0307 Pichia pastoris GS115 hypothetical protein XP_002491202.1 575422 D 644223 CDS PAS_chr2-1_0308 254568186 8198996 578841..580355 1 NC_012964.1 Glucose-6-phosphate dehydrogenase (G6PD), catalyzes the first step of the pentose phosphate pathway 580355 8198996 PAS_chr2-1_0308 Pichia pastoris GS115 Glucose-6-phosphate dehydrogenase (G6PD), catalyzes the first step of the pentose phosphate pathway XP_002491203.1 578841 D 644223 CDS PAS_chr2-1_0309 254568188 8198997 580596..582104 1 NC_012964.1 Protein with similarity to mammalian monocarboxylate permeases 582104 8198997 PAS_chr2-1_0309 Pichia pastoris GS115 Protein with similarity to mammalian monocarboxylate permeases XP_002491204.1 580596 D 644223 CDS PAS_chr2-1_0310 254568190 8198998 582195..582368 1 NC_012964.1 hypothetical protein 582368 8198998 PAS_chr2-1_0310 Pichia pastoris GS115 hypothetical protein XP_002491205.1 582195 D 644223 CDS PAS_chr2-1_0311 254568192 8198999 complement(582573..585695) 1 NC_012964.1 NAD(+)-dependent glutamate dehydrogenase, degrades glutamate to ammonia and alpha-ketoglutarate 585695 8198999 PAS_chr2-1_0311 Pichia pastoris GS115 NAD(+)-dependent glutamate dehydrogenase, degrades glutamate to ammonia and alpha-ketoglutarate XP_002491206.1 582573 R 644223 CDS PAS_chr2-1_0312 254568194 8199000 complement(585982..586200) 1 NC_012964.1 hypothetical protein 586200 8199000 PAS_chr2-1_0312 Pichia pastoris GS115 hypothetical protein XP_002491207.1 585982 R 644223 CDS PAS_chr2-1_0313 254568196 8199001 complement(587014..588096) 1 NC_012964.1 Bifunctional enzyme with alcohol dehydrogenase and glutathione-dependent formaldehyde dehydrogenase 588096 8199001 PAS_chr2-1_0313 Pichia pastoris GS115 Bifunctional enzyme with alcohol dehydrogenase and glutathione-dependent formaldehyde dehydrogenase XP_002491208.1 587014 R 644223 CDS PAS_chr2-1_0314 254568198 8199002 complement(588280..588885) 1 NC_012964.1 Protein that binds tRNA and methionyl-and glutamyl-tRNA synthetases (Mes1p and Gus1p) 588885 8199002 PAS_chr2-1_0314 Pichia pastoris GS115 Protein that binds tRNA and methionyl-and glutamyl-tRNA synthetases (Mes1p and Gus1p) XP_002491209.1 588280 R 644223 CDS PAS_chr2-1_0315 254568200 8199003 complement(589060..590061) 1 NC_012964.1 Omega class glutathione transferase 590061 8199003 PAS_chr2-1_0315 Pichia pastoris GS115 Omega class glutathione transferase XP_002491210.1 589060 R 644223 CDS PAS_chr2-1_0316 254568202 8199004 590434..591303 1 NC_012964.1 hypothetical protein 591303 8199004 PAS_chr2-1_0316 Pichia pastoris GS115 hypothetical protein XP_002491211.1 590434 D 644223 CDS PAS_chr2-1_0317 254568204 8199005 592019..594529 1 NC_012964.1 hypothetical protein 594529 8199005 PAS_chr2-1_0317 Pichia pastoris GS115 hypothetical protein XP_002491212.1 592019 D 644223 CDS PAS_chr2-1_0318 254568206 8199006 594670..595809 1 NC_012964.1 hypothetical protein 595809 8199006 PAS_chr2-1_0318 Pichia pastoris GS115 hypothetical protein XP_002491213.1 594670 D 644223 CDS PAS_chr2-1_0319 254568208 8199007 complement(595815..598016) 1 NC_012964.1 hypothetical protein 598016 8199007 PAS_chr2-1_0319 Pichia pastoris GS115 hypothetical protein XP_002491214.1 595815 R 644223 CDS PAS_chr2-1_0320 254568210 8199008 complement(598214..600403) 1 NC_012964.1 Protein containing a UCS (UNC-45/CRO1/SHE4) domain 600403 8199008 PAS_chr2-1_0320 Pichia pastoris GS115 Protein containing a UCS (UNC-45/CRO1/SHE4) domain XP_002491215.1 598214 R 644223 CDS PAS_chr2-1_0321 254568212 8199009 complement(600554..601339) 1 NC_012964.1 Subunit of the NuA4 histone acetyltransferase complex that acetylates histone H4 and H2A 601339 8199009 PAS_chr2-1_0321 Pichia pastoris GS115 Subunit of the NuA4 histone acetyltransferase complex that acetylates histone H4 and H2A XP_002491216.1 600554 R 644223 CDS PAS_chr2-1_0827 254568214 8199010 complement(601428..602216) 1 NC_012964.1 hypothetical protein 602216 8199010 PAS_chr2-1_0827 Pichia pastoris GS115 hypothetical protein XP_002491217.1 601428 R 644223 CDS PAS_chr2-1_0322 254568216 8198102 complement(602354..604051) 1 NC_012964.1 Calnexin 604051 8198102 PAS_chr2-1_0322 Pichia pastoris GS115 Calnexin XP_002491218.1 602354 R 644223 CDS PAS_chr2-1_0323 254568218 8199011 604352..604924 1 NC_012964.1 Essential Hsp90p co-chaperone 604924 8199011 PAS_chr2-1_0323 Pichia pastoris GS115 Essential Hsp90p co-chaperone XP_002491219.1 604352 D 644223 CDS PAS_chr2-1_0828 254568220 8199012 605174..606667 1 NC_012964.1 hypothetical protein 606667 8199012 PAS_chr2-1_0828 Pichia pastoris GS115 hypothetical protein XP_002491220.1 605174 D 644223 CDS PAS_chr2-1_0324 254568222 8198103 complement(606751..609225) 1 NC_012964.1 Oligomeric mitochondrial matrix chaperone 609225 8198103 PAS_chr2-1_0324 Pichia pastoris GS115 Oligomeric mitochondrial matrix chaperone XP_002491221.1 606751 R 644223 CDS PAS_chr2-1_0325 254568224 8199013 complement(609467..610468) 1 NC_012964.1 hypothetical protein 610468 8199013 PAS_chr2-1_0325 Pichia pastoris GS115 hypothetical protein XP_002491222.1 609467 R 644223 CDS PAS_chr2-1_0326 254568226 8199014 610645..611541 1 NC_012964.1 hypothetical protein 611541 8199014 PAS_chr2-1_0326 Pichia pastoris GS115 hypothetical protein XP_002491223.1 610645 D 644223 CDS PAS_chr2-1_0327 254568228 8199015 611713..614208 1 NC_012964.1 hypothetical protein 614208 8199015 PAS_chr2-1_0327 Pichia pastoris GS115 hypothetical protein XP_002491224.1 611713 D 644223 CDS PAS_chr2-1_0328 254568230 8199016 614395..616143 1 NC_012964.1 Palmitoyl transferase involved in protein palmitoylation 616143 8199016 PAS_chr2-1_0328 Pichia pastoris GS115 Palmitoyl transferase involved in protein palmitoylation XP_002491225.1 614395 D 644223 CDS PAS_chr2-1_0829 254568232 8199017 616284..618443 1 NC_012964.1 hypothetical protein 618443 8199017 PAS_chr2-1_0829 Pichia pastoris GS115 hypothetical protein XP_002491226.1 616284 D 644223 CDS PAS_chr2-1_0830 254568234 8198104 618580..620355 1 NC_012964.1 hypothetical protein 620355 8198104 PAS_chr2-1_0830 Pichia pastoris GS115 hypothetical protein XP_002491227.1 618580 D 644223 CDS PAS_chr2-1_0329 254568236 8198105 complement(620382..623015) 1 NC_012964.1 Transcriptional activator of proline utilization genes 623015 8198105 PAS_chr2-1_0329 Pichia pastoris GS115 Transcriptional activator of proline utilization genes XP_002491228.1 620382 R 644223 CDS PAS_chr2-1_0330 254568238 8199018 623299..624333 1 NC_012964.1 Probable cochaperone, regulates activity of Cyr1p (adenylyl cyclase) 624333 8199018 PAS_chr2-1_0330 Pichia pastoris GS115 Probable cochaperone, regulates activity of Cyr1p (adenylyl cyclase) XP_002491229.1 623299 D 644223 CDS PAS_chr2-1_0331 254568240 8199019 complement(624343..625902) 1 NC_012964.1 Mitotic spindle midzone localized microtubule-associated protein (MAP) family member 625902 8199019 PAS_chr2-1_0331 Pichia pastoris GS115 Mitotic spindle midzone localized microtubule-associated protein (MAP) family member XP_002491230.1 624343 R 644223 CDS PAS_chr2-1_0332 254568242 8199020 complement(626058..626456) 1 NC_012964.1 hypothetical protein 626456 8199020 PAS_chr2-1_0332 Pichia pastoris GS115 hypothetical protein XP_002491231.1 626058 R 644223 CDS PAS_chr2-1_0333 254568244 8199021 626914..627924 1 NC_012964.1 Zeta-crystallin homolog, found in the cytoplasm and nucleus 627924 8199021 PAS_chr2-1_0333 Pichia pastoris GS115 Zeta-crystallin homolog, found in the cytoplasm and nucleus XP_002491232.1 626914 D 644223 CDS PAS_chr2-1_0334 254568246 8199022 628025..628909 1 NC_012964.1 hypothetical protein 628909 8199022 PAS_chr2-1_0334 Pichia pastoris GS115 hypothetical protein XP_002491233.1 628025 D 644223 CDS PAS_chr2-1_0335 254568248 8199023 complement(628940..630862) 1 NC_012964.1 hypothetical protein 630862 8199023 PAS_chr2-1_0335 Pichia pastoris GS115 hypothetical protein XP_002491234.1 628940 R 644223 CDS PAS_chr2-1_0336 254568250 8199024 631130..632167 1 NC_012964.1 hypothetical protein 632167 8199024 PAS_chr2-1_0336 Pichia pastoris GS115 hypothetical protein XP_002491235.1 631130 D 644223 CDS PAS_chr2-1_0337 254568252 8199025 632469..632744 1 NC_012964.1 hypothetical protein 632744 8199025 PAS_chr2-1_0337 Pichia pastoris GS115 hypothetical protein XP_002491236.1 632469 D 644223 CDS PAS_chr2-1_0338 254568254 8199026 complement(632841..633431) 1 NC_012964.1 hypothetical protein 633431 8199026 PAS_chr2-1_0338 Pichia pastoris GS115 hypothetical protein XP_002491237.1 632841 R 644223 CDS PAS_chr2-1_0339 254568256 8199027 complement(633615..634349) 1 NC_012964.1 Putative protein of unknown function 634349 8199027 PAS_chr2-1_0339 Pichia pastoris GS115 Putative protein of unknown function XP_002491238.1 633615 R 644223 CDS PAS_chr2-1_0340 254568258 8199028 635048..635344 1 NC_012964.1 hypothetical protein 635344 8199028 PAS_chr2-1_0340 Pichia pastoris GS115 hypothetical protein XP_002491239.1 635048 D 644223 CDS PAS_chr2-1_0341 254568260 8199029 635802..636761 1 NC_012964.1 hypothetical protein 636761 8199029 PAS_chr2-1_0341 Pichia pastoris GS115 hypothetical protein XP_002491240.1 635802 D 644223 CDS PAS_chr2-1_0342 254568262 8199030 complement(636802..637986) 1 NC_012964.1 ER localized integral membrane protein that may promote secretion of certain hexose transporters 637986 8199030 PAS_chr2-1_0342 Pichia pastoris GS115 ER localized integral membrane protein that may promote secretion of certain hexose transporters XP_002491241.1 636802 R 644223 CDS PAS_chr2-1_0343 254568264 8199031 638596..640089 1 NC_012964.1 hypothetical protein 640089 8199031 PAS_chr2-1_0343 Pichia pastoris GS115 hypothetical protein XP_002491242.1 638596 D 644223 CDS PAS_chr2-1_0344 254568266 8199032 complement(join(640139..640454,640520..640530)) 1 NC_012964.1 Protein required for assembly of cytochrome c oxidase 640530 8199032 PAS_chr2-1_0344 Pichia pastoris GS115 Protein required for assembly of cytochrome c oxidase XP_002491243.1 640139 R 644223 CDS PAS_chr2-1_0345 254568268 8199033 join(640879..643977,644045..645082) 1 NC_012964.1 Subunit of the RAVE complex (Rav1p, Rav2p, Skp1p), which promotes assembly of the V-ATPase holoenzym 645082 8199033 PAS_chr2-1_0345 Pichia pastoris GS115 Subunit of the RAVE complex (Rav1p, Rav2p, Skp1p), which promotes assembly of the V-ATPase holoenzym XP_002491244.1 640879 D 644223 CDS PAS_chr2-1_0893 254568270 8199034 join(645192..645204,645256..645668) 1 NC_012964.1 hypothetical protein 645668 8199034 PAS_chr2-1_0893 Pichia pastoris GS115 hypothetical protein XP_002491245.1 645192 D 644223 CDS PAS_chr2-1_0346 254568272 8198962 645915..648149 1 NC_012964.1 Methionyl-tRNA synthetase, forms a complex with glutamyl-tRNA synthetase (Gus1p) and Arc1p 648149 8198962 PAS_chr2-1_0346 Pichia pastoris GS115 Methionyl-tRNA synthetase, forms a complex with glutamyl-tRNA synthetase (Gus1p) and Arc1p XP_002491246.1 645915 D 644223 CDS PAS_chr2-1_0347 254568274 8199035 complement(648239..649051) 1 NC_012964.1 Protein kinase 649051 8199035 PAS_chr2-1_0347 Pichia pastoris GS115 Protein kinase XP_002491247.1 648239 R 644223 CDS PAS_chr2-1_0348 254568276 8199036 649270..649977 1 NC_012964.1 hypothetical protein 649977 8199036 PAS_chr2-1_0348 Pichia pastoris GS115 hypothetical protein XP_002491248.1 649270 D 644223 CDS PAS_chr2-1_0349 254568278 8199037 complement(650011..650985) 1 NC_012964.1 Mitochondrial integral inner membrane protein required for membrane insertion of C-terminus of Cox2p 650985 8199037 PAS_chr2-1_0349 Pichia pastoris GS115 Mitochondrial integral inner membrane protein required for membrane insertion of C-terminus of Cox2p XP_002491249.1 650011 R 644223 CDS PAS_chr2-1_0350 254568280 8199038 complement(651310..651654) 1 NC_012964.1 Protein that forms a complex with Spt5p and mediates both activation and inhibition of transcription 651654 8199038 PAS_chr2-1_0350 Pichia pastoris GS115 Protein that forms a complex with Spt5p and mediates both activation and inhibition of transcription XP_002491250.1 651310 R 644223 CDS PAS_chr2-1_0351 254568282 8199039 complement(651824..653512) 1 NC_012964.1 High affinity methionine permease 653512 8199039 PAS_chr2-1_0351 Pichia pastoris GS115 High affinity methionine permease XP_002491251.1 651824 R 644223 CDS PAS_chr2-1_0352 254568284 8199040 653722..653862 1 NC_012964.1 hypothetical protein 653862 8199040 PAS_chr2-1_0352 Pichia pastoris GS115 hypothetical protein XP_002491252.1 653722 D 644223 CDS PAS_chr2-1_0353 254568286 8199041 655271..655654 1 NC_012964.1 hypothetical protein 655654 8199041 PAS_chr2-1_0353 Pichia pastoris GS115 hypothetical protein XP_002491253.1 655271 D 644223 CDS PAS_chr2-1_0354 254568288 8199042 complement(655934..658237) 1 NC_012964.1 Ubiquitin-protein ligase involved in ubiquitin-mediated protein degradation 658237 8199042 PAS_chr2-1_0354 Pichia pastoris GS115 Ubiquitin-protein ligase involved in ubiquitin-mediated protein degradation XP_002491254.1 655934 R 644223 CDS PAS_chr2-1_0355 254568290 8199043 659263..660846 1 NC_012964.1 hypothetical protein 660846 8199043 PAS_chr2-1_0355 Pichia pastoris GS115 hypothetical protein XP_002491255.1 659263 D 644223 CDS PAS_chr2-1_0356 254568292 8199044 complement(660898..661896) 1 NC_012964.1 Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex 661896 8199044 PAS_chr2-1_0356 Pichia pastoris GS115 Esa1p-associated factor, nonessential component of the NuA4 acetyltransferase complex XP_002491256.1 660898 R 644223 CDS PAS_chr2-1_0357 254568294 8199045 complement(662140..663417) 1 NC_012964.1 Palmitoylated, plasma membrane-bound casein kinase I isoform 663417 8199045 PAS_chr2-1_0357 Pichia pastoris GS115 Palmitoylated, plasma membrane-bound casein kinase I isoform XP_002491257.1 662140 R 644223 CDS PAS_chr2-1_0358 254568296 8199046 complement(663798..664970) 1 NC_012964.1 Cystathionine beta-lyase, converts cystathionine into homocysteine 664970 8199046 PAS_chr2-1_0358 Pichia pastoris GS115 Cystathionine beta-lyase, converts cystathionine into homocysteine XP_002491258.1 663798 R 644223 CDS PAS_chr2-1_0359 254568298 8199047 665380..666105 1 NC_012964.1 hypothetical protein 666105 8199047 PAS_chr2-1_0359 Pichia pastoris GS115 hypothetical protein XP_002491259.1 665380 D 644223 CDS PAS_chr2-1_0360 254568300 8199048 complement(666916..668013) 1 NC_012964.1 Putative protein with sequence similarity to hydroxyacid dehydrogenases 668013 8199048 PAS_chr2-1_0360 Pichia pastoris GS115 Putative protein with sequence similarity to hydroxyacid dehydrogenases XP_002491260.1 666916 R 644223 CDS PAS_chr2-1_0361 254568302 8199049 complement(join(668216..668676,668865..668889)) 1 NC_012964.1 Subunit IV of cytochrome c oxidase 668889 8199049 PAS_chr2-1_0361 Pichia pastoris GS115 Subunit IV of cytochrome c oxidase XP_002491261.1 668216 R 644223 CDS PAS_chr2-1_0362 254568304 8199050 669261..669620 1 NC_012964.1 Non-essential regulatory subunit B of protein phosphatase 2A, which has multiple roles in mitosis an 669620 8199050 PAS_chr2-1_0362 Pichia pastoris GS115 Non-essential regulatory subunit B of protein phosphatase 2A, which has multiple roles in mitosis an XP_002491262.1 669261 D 644223 CDS PAS_chr2-1_0831 254568306 8199051 670022..671401 1 NC_012964.1 hypothetical protein 671401 8199051 PAS_chr2-1_0831 Pichia pastoris GS115 hypothetical protein XP_002491263.1 670022 D 644223 CDS PAS_chr2-1_0363 254568308 8198106 complement(671502..671867) 1 NC_012964.1 Subunit VIa of cytochrome c oxidase, which is the terminal member of the mitochondrial inner membran 671867 8198106 PAS_chr2-1_0363 Pichia pastoris GS115 Subunit VIa of cytochrome c oxidase, which is the terminal member of the mitochondrial inner membran XP_002491264.1 671502 R 644223 CDS PAS_chr2-1_0364 254568310 8199052 complement(join(672021..672997,673096..673438)) 1 NC_012964.1 Probable mRNA N6-adenosine methyltransferase 673438 8199052 PAS_chr2-1_0364 Pichia pastoris GS115 Probable mRNA N6-adenosine methyltransferase XP_002491265.1 672021 R 644223 CDS PAS_chr2-1_0365 254568312 8199053 join(673798..673849,673909..674453) 1 NC_012964.1 Putative protein of unknown function 674453 8199053 PAS_chr2-1_0365 Pichia pastoris GS115 Putative protein of unknown function XP_002491266.1 673798 D 644223 CDS PAS_chr2-1_0366 254568314 8199054 674845..678396 1 NC_012964.1 Cytoskeletal protein binding protein required for assembly of the cortical actin cytoskeleton 678396 8199054 PAS_chr2-1_0366 Pichia pastoris GS115 Cytoskeletal protein binding protein required for assembly of the cortical actin cytoskeleton XP_002491267.1 674845 D 644223 CDS PAS_chr2-1_0367 254568316 8199055 678663..680777 1 NC_012964.1 Essential protein required for chromosome condensation 680777 8199055 PAS_chr2-1_0367 Pichia pastoris GS115 Essential protein required for chromosome condensation XP_002491268.1 678663 D 644223 CDS PAS_chr2-1_0368 254568318 8199056 complement(680824..683175) 1 NC_012964.1 Isopropylmalate isomerase, catalyzes the second step in the leucine biosynthesis pathway 683175 8199056 PAS_chr2-1_0368 Pichia pastoris GS115 Isopropylmalate isomerase, catalyzes the second step in the leucine biosynthesis pathway XP_002491269.1 680824 R 644223 CDS PAS_chr2-1_0369 254568320 8199057 complement(join(683375..685636,685699..685749)) 1 NC_012964.1 Ubiquitin-protein ligase, member of the cullin family with similarity to Cdc53p and human CUL3 685749 8199057 PAS_chr2-1_0369 Pichia pastoris GS115 Ubiquitin-protein ligase, member of the cullin family with similarity to Cdc53p and human CUL3 XP_002491270.1 683375 R 644223 CDS PAS_chr2-1_0370 254568322 8199058 685937..687634 1 NC_012964.1 Component of the Swr1p complex that incorporates Htz1p into chromatin 687634 8199058 PAS_chr2-1_0370 Pichia pastoris GS115 Component of the Swr1p complex that incorporates Htz1p into chromatin XP_002491271.1 685937 D 644223 CDS PAS_chr2-1_0371 254568324 8199059 complement(687712..692589) 1 NC_012964.1 hypothetical protein 692589 8199059 PAS_chr2-1_0371 Pichia pastoris GS115 hypothetical protein XP_002491272.1 687712 R 644223 CDS PAS_chr2-1_0372 254568326 8199060 692741..694888 1 NC_012964.1 Actin-and formin-interacting protein, involved in actin cable nucleation and polarized cell growth 694888 8199060 PAS_chr2-1_0372 Pichia pastoris GS115 Actin-and formin-interacting protein, involved in actin cable nucleation and polarized cell growth XP_002491273.1 692741 D 644223 CDS PAS_chr2-1_0373 254568328 8199061 complement(694896..697181) 1 NC_012964.1 Reverse transcriptase subunit of the telomerase holoenzyme 697181 8199061 PAS_chr2-1_0373 Pichia pastoris GS115 Reverse transcriptase subunit of the telomerase holoenzyme XP_002491274.1 694896 R 644223 CDS PAS_chr2-1_0374 254568330 8199062 697325..698242 1 NC_012964.1 Subunit of tRNA-specific adenosine-34 deaminase 698242 8199062 PAS_chr2-1_0374 Pichia pastoris GS115 Subunit of tRNA-specific adenosine-34 deaminase XP_002491275.1 697325 D 644223 CDS PAS_chr2-1_0375 254568332 8199063 complement(698875..699966) 1 NC_012964.1 Component of the RSC chromatin remodeling complex 699966 8199063 PAS_chr2-1_0375 Pichia pastoris GS115 Component of the RSC chromatin remodeling complex XP_002491276.1 698875 R 644223 CDS PAS_chr2-1_0376 254568334 8199064 join(700204..700283,700502..701057) 1 NC_012964.1 Putative GTPase, member of the Obg family 701057 8199064 PAS_chr2-1_0376 Pichia pastoris GS115 Putative GTPase, member of the Obg family XP_002491277.1 700204 D 644223 CDS PAS_chr2-1_0832 254568336 8199065 701666..703273 1 NC_012964.1 hypothetical protein 703273 8199065 PAS_chr2-1_0832 Pichia pastoris GS115 hypothetical protein XP_002491278.1 701666 D 644223 CDS PAS_chr2-1_0377 254568338 8198107 complement(join(703305..705572,705643..705768)) 1 NC_012964.1 Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex 705768 8198107 PAS_chr2-1_0377 Pichia pastoris GS115 Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex XP_002491279.1 703305 R 644223 CDS PAS_chr2-1_0378 254568340 8199066 706001..707305 1 NC_012964.1 Putative ATP-dependent RNA helicase of the DEAD-box family 707305 8199066 PAS_chr2-1_0378 Pichia pastoris GS115 Putative ATP-dependent RNA helicase of the DEAD-box family XP_002491280.1 706001 D 644223 CDS PAS_chr2-1_0379 254568342 8199067 complement(707331..709007) 1 NC_012964.1 Signal recognition particle (SRP) receptor-alpha subunit 709007 8199067 PAS_chr2-1_0379 Pichia pastoris GS115 Signal recognition particle (SRP) receptor-alpha subunit XP_002491281.1 707331 R 644223 CDS PAS_chr2-1_0380 254568344 8199068 complement(709187..710707) 1 NC_012964.1 Protein involved in nuclear export of the large ribosomal subunit 710707 8199068 PAS_chr2-1_0380 Pichia pastoris GS115 Protein involved in nuclear export of the large ribosomal subunit XP_002491282.1 709187 R 644223 CDS PAS_chr2-1_0381 254568346 8199069 710882..711304 1 NC_012964.1 hypothetical protein 711304 8199069 PAS_chr2-1_0381 Pichia pastoris GS115 hypothetical protein XP_002491283.1 710882 D 644223 CDS PAS_chr2-1_0382 254568348 8199070 complement(711267..711914) 1 NC_012964.1 hypothetical protein 711914 8199070 PAS_chr2-1_0382 Pichia pastoris GS115 hypothetical protein XP_002491284.1 711267 R 644223 CDS PAS_chr2-1_0383 254568350 8199071 712150..713652 1 NC_012964.1 L-homoserine-O-acetyltransferase, catalyzes the conversion of homoserine to O-acetyl homoserine 713652 8199071 PAS_chr2-1_0383 Pichia pastoris GS115 L-homoserine-O-acetyltransferase, catalyzes the conversion of homoserine to O-acetyl homoserine XP_002491285.1 712150 D 644223 CDS PAS_chr2-1_0384 254568352 8198853 complement(713722..714618) 1 NC_012964.1 Mitochondrial ribosomal protein of the small subunit 714618 8198853 PAS_chr2-1_0384 Pichia pastoris GS115 Mitochondrial ribosomal protein of the small subunit XP_002491286.1 713722 R 644223 CDS PAS_chr2-1_0385 254568354 8198854 complement(714707..715444) 1 NC_012964.1 hypothetical protein 715444 8198854 PAS_chr2-1_0385 Pichia pastoris GS115 hypothetical protein XP_002491287.1 714707 R 644223 CDS PAS_chr2-1_0386 254568356 8198855 complement(715493..716332) 1 NC_012964.1 Protein involved in minichromosome maintenance 716332 8198855 PAS_chr2-1_0386 Pichia pastoris GS115 Protein involved in minichromosome maintenance XP_002491288.1 715493 R 644223 CDS PAS_chr2-1_0387 254568358 8198856 716629..717216 1 NC_012964.1 Subunit of RNase MRP 717216 8198856 PAS_chr2-1_0387 Pichia pastoris GS115 Subunit of RNase MRP XP_002491289.1 716629 D 644223 CDS PAS_chr2-1_0388 254568360 8198857 717482..718144 1 NC_012964.1 Subunit of tRNA-specific adenosine-34 deaminase 718144 8198857 PAS_chr2-1_0388 Pichia pastoris GS115 Subunit of tRNA-specific adenosine-34 deaminase XP_002491290.1 717482 D 644223 CDS PAS_chr2-1_0389 254568362 8198858 complement(718203..720188) 1 NC_012964.1 Sorting nexin 720188 8198858 PAS_chr2-1_0389 Pichia pastoris GS115 Sorting nexin XP_002491291.1 718203 R 644223 CDS PAS_chr2-1_0391 254568364 8198859 join(721942..723167,723229..724108) 1 NC_012964.1 Lanosterol synthase, an essential enzyme that catalyzes the cyclization of squalene 2,3-epoxide 724108 8198859 PAS_chr2-1_0391 Pichia pastoris GS115 Lanosterol synthase, an essential enzyme that catalyzes the cyclization of squalene 2,3-epoxide XP_002491292.1 721942 D 644223 CDS PAS_chr2-1_0392 254568366 8198860 724261..724899 1 NC_012964.1 Protein with similarity to the p27 subunit of mammalian proteasome modulator 724899 8198860 PAS_chr2-1_0392 Pichia pastoris GS115 Protein with similarity to the p27 subunit of mammalian proteasome modulator XP_002491293.1 724261 D 644223 CDS PAS_chr2-1_0393 254568368 8198861 complement(join(724955..725222,725279..725304)) 1 NC_012964.1 Ubiquitin-like protein with weak sequence similarity to ubiquitin 725304 8198861 PAS_chr2-1_0393 Pichia pastoris GS115 Ubiquitin-like protein with weak sequence similarity to ubiquitin XP_002491294.1 724955 R 644223 CDS PAS_chr2-1_0394 254568370 8198862 725446..727152 1 NC_012964.1 TFIIIB B-related factor 727152 8198862 PAS_chr2-1_0394 Pichia pastoris GS115 TFIIIB B-related factor XP_002491295.1 725446 D 644223 CDS PAS_chr2-1_0395 254568372 8198863 727303..728688 1 NC_012964.1 DNA polymerase III (delta) subunit, essential for cell viability 728688 8198863 PAS_chr2-1_0395 Pichia pastoris GS115 DNA polymerase III (delta) subunit, essential for cell viability XP_002491296.1 727303 D 644223 CDS PAS_chr2-1_0396 254568374 8198864 complement(728709..730352) 1 NC_012964.1 Mitochondrial methionyl-tRNA synthetase (MetRS) 730352 8198864 PAS_chr2-1_0396 Pichia pastoris GS115 Mitochondrial methionyl-tRNA synthetase (MetRS) XP_002491297.1 728709 R 644223 CDS PAS_chr2-1_0397 254568376 8198865 complement(730531..731373) 1 NC_012964.1 Integral membrane protein required for the biogenesis of ER-derived COPII transport vesicles 731373 8198865 PAS_chr2-1_0397 Pichia pastoris GS115 Integral membrane protein required for the biogenesis of ER-derived COPII transport vesicles XP_002491298.1 730531 R 644223 CDS PAS_chr2-1_0398 254568378 8198866 731547..732296 1 NC_012964.1 DNA repair protein Nse1 732296 8198866 PAS_chr2-1_0398 Pichia pastoris GS115 DNA repair protein Nse1 XP_002491299.1 731547 D 644223 CDS PAS_chr2-1_0399 254568380 8198867 complement(732291..733337) 1 NC_012964.1 hypothetical protein 733337 8198867 PAS_chr2-1_0399 Pichia pastoris GS115 hypothetical protein XP_002491300.1 732291 R 644223 CDS PAS_chr2-1_0400 254568382 8198868 733530..734981 1 NC_012964.1 Putative protein similar to bacterial glutamyl-tRNA amidotransferases 734981 8198868 PAS_chr2-1_0400 Pichia pastoris GS115 Putative protein similar to bacterial glutamyl-tRNA amidotransferases XP_002491301.1 733530 D 644223 CDS PAS_chr2-1_0401 254568384 8198869 complement(734985..738857) 1 NC_012964.1 Protein that localizes to chromatin and has a role in regulation of histone gene expression 738857 8198869 PAS_chr2-1_0401 Pichia pastoris GS115 Protein that localizes to chromatin and has a role in regulation of histone gene expression XP_002491302.1 734985 R 644223 CDS PAS_chr2-1_0402 254568386 8198870 739529..742498 1 NC_012964.1 Alpha subunit of heterooctameric phosphofructokinase involved in glycolysis 742498 8198870 PAS_chr2-1_0402 Pichia pastoris GS115 Alpha subunit of heterooctameric phosphofructokinase involved in glycolysis XP_002491303.1 739529 D 644223 CDS PAS_chr2-1_0403 254568388 8198871 742868..743212 1 NC_012964.1 hypothetical protein 743212 8198871 PAS_chr2-1_0403 Pichia pastoris GS115 hypothetical protein XP_002491304.1 742868 D 644223 CDS PAS_chr2-1_0404 254568390 8198872 744022..745716 1 NC_012964.1 Transcriptional repressor and activator 745716 8198872 PAS_chr2-1_0404 Pichia pastoris GS115 Transcriptional repressor and activator XP_002491305.1 744022 D 644223 CDS PAS_chr2-1_0405 254568392 8198873 complement(745815..746777) 1 NC_012964.1 hypothetical protein 746777 8198873 PAS_chr2-1_0405 Pichia pastoris GS115 hypothetical protein XP_002491306.1 745815 R 644223 CDS PAS_chr2-1_0406 254568394 8198874 746887..747582 1 NC_012964.1 tRNA methyltransferase, catalyzes esterification of modified uridine nucleotides in tRNAs 747582 8198874 PAS_chr2-1_0406 Pichia pastoris GS115 tRNA methyltransferase, catalyzes esterification of modified uridine nucleotides in tRNAs XP_002491307.1 746887 D 644223 CDS PAS_chr2-1_0407 254568396 8198875 complement(747724..749379) 1 NC_012964.1 Serine/threonine protein phosphatase Z, isoform of Ppz2p 749379 8198875 PAS_chr2-1_0407 Pichia pastoris GS115 Serine/threonine protein phosphatase Z, isoform of Ppz2p XP_002491308.1 747724 R 644223 CDS PAS_chr2-1_0408 254568398 8198876 749794..751530 1 NC_012964.1 Putative transporter (DHA1 family) of multidrug resistance transporter 751530 8198876 PAS_chr2-1_0408 Pichia pastoris GS115 Putative transporter (DHA1 family) of multidrug resistance transporter XP_002491309.1 749794 D 644223 CDS PAS_chr2-1_0409 254568400 8198877 complement(751705..752892) 1 NC_012964.1 Steryl ester hydrolase, catalyzes steryl ester hydrolysis at the plasma membrane 752892 8198877 PAS_chr2-1_0409 Pichia pastoris GS115 Steryl ester hydrolase, catalyzes steryl ester hydrolysis at the plasma membrane XP_002491310.1 751705 R 644223 CDS PAS_chr2-1_0410 254568402 8198878 complement(753433..754305) 1 NC_012964.1 Essential protein involved in 60S ribosome maturation 754305 8198878 PAS_chr2-1_0410 Pichia pastoris GS115 Essential protein involved in 60S ribosome maturation XP_002491311.1 753433 R 644223 CDS PAS_chr2-1_0411 254568404 8198879 754716..756200 1 NC_012964.1 Membrane protein involved in zinc metabolism, member of the four-protein IZH family 756200 8198879 PAS_chr2-1_0411 Pichia pastoris GS115 Membrane protein involved in zinc metabolism, member of the four-protein IZH family XP_002491312.1 754716 D 644223 CDS PAS_chr2-1_0412 254568406 8198880 756448..757545 1 NC_012964.1 hypothetical protein 757545 8198880 PAS_chr2-1_0412 Pichia pastoris GS115 hypothetical protein XP_002491313.1 756448 D 644223 CDS PAS_chr2-1_0413 254568408 8198881 complement(757616..760132) 1 NC_012964.1 Putative protein of unknown function 760132 8198881 PAS_chr2-1_0413 Pichia pastoris GS115 Putative protein of unknown function XP_002491314.1 757616 R 644223 CDS PAS_chr2-1_0414 254568410 8198882 760366..760995 1 NC_012964.1 Cytoplasmic RNA-binding protein, contains an RNA recognition motif (RRM) 760995 8198882 PAS_chr2-1_0414 Pichia pastoris GS115 Cytoplasmic RNA-binding protein, contains an RNA recognition motif (RRM) XP_002491315.1 760366 D 644223 CDS PAS_chr2-1_0415 254568412 8198883 complement(761083..762798) 1 NC_012964.1 Alpha-isopropylmalate synthase (2-isopropylmalate synthase) 762798 8198883 PAS_chr2-1_0415 Pichia pastoris GS115 Alpha-isopropylmalate synthase (2-isopropylmalate synthase) XP_002491316.1 761083 R 644223 CDS PAS_chr2-1_0834 254568414 8198884 complement(762961..764070) 1 NC_012964.1 hypothetical protein 764070 8198884 PAS_chr2-1_0834 Pichia pastoris GS115 hypothetical protein XP_002491317.1 762961 R 644223 CDS PAS_chr2-1_0416 254568416 8198109 764399..766474 1 NC_012964.1 Protein kinase that forms a complex with Mad1p and Bub3p 766474 8198109 PAS_chr2-1_0416 Pichia pastoris GS115 Protein kinase that forms a complex with Mad1p and Bub3p XP_002491318.1 764399 D 644223 CDS PAS_chr2-1_0417 254568418 8198885 complement(766515..768335) 1 NC_012964.1 Transmembrane protein subunit of the glycosylphosphatidylinositol transamidase complex 768335 8198885 PAS_chr2-1_0417 Pichia pastoris GS115 Transmembrane protein subunit of the glycosylphosphatidylinositol transamidase complex XP_002491319.1 766515 R 644223 CDS PAS_chr2-1_0418 254568420 8198886 768523..771636 1 NC_012964.1 U2-snRNP associated splicing factor 771636 8198886 PAS_chr2-1_0418 Pichia pastoris GS115 U2-snRNP associated splicing factor XP_002491320.1 768523 D 644223 CDS PAS_chr2-1_0419 254568422 8198887 771924..773024 1 NC_012964.1 Mitochondrial NAD+ transporter, involved in the transport of NAD+ into the mitochondria 773024 8198887 PAS_chr2-1_0419 Pichia pastoris GS115 Mitochondrial NAD+ transporter, involved in the transport of NAD+ into the mitochondria XP_002491321.1 771924 D 644223 CDS PAS_chr2-1_0420 254568424 8198888 complement(773392..773769) 1 NC_012964.1 hypothetical protein 773769 8198888 PAS_chr2-1_0420 Pichia pastoris GS115 hypothetical protein XP_002491322.1 773392 R 644223 CDS PAS_chr2-1_0421 254568426 8198889 773845..775749 1 NC_012964.1 ER protein with chaperone and co-chaperone activity, involved in retention of resident ER proteins 775749 8198889 PAS_chr2-1_0421 Pichia pastoris GS115 ER protein with chaperone and co-chaperone activity, involved in retention of resident ER proteins XP_002491323.1 773845 D 644223 CDS PAS_chr2-1_0422 254568428 8198890 775912..776439 1 NC_012964.1 Acireductone dioxygenease involved in the methionine salvage pathway 776439 8198890 PAS_chr2-1_0422 Pichia pastoris GS115 Acireductone dioxygenease involved in the methionine salvage pathway XP_002491324.1 775912 D 644223 CDS PAS_chr2-1_0833 254568430 8198891 join(776747..776780,776835..777157) 1 NC_012964.1 hypothetical protein 777157 8198891 PAS_chr2-1_0833 Pichia pastoris GS115 hypothetical protein XP_002491325.1 776747 D 644223 CDS PAS_chr2-1_0423 254568432 8198108 complement(777240..778535) 1 NC_012964.1 Beta subunit of the oligosaccharyl transferase (OST) glycoprotein complex 778535 8198108 PAS_chr2-1_0423 Pichia pastoris GS115 Beta subunit of the oligosaccharyl transferase (OST) glycoprotein complex XP_002491326.1 777240 R 644223 CDS PAS_chr2-1_0424 254568434 8198892 complement(778979..781939) 1 NC_012964.1 Phosphatidylinositol 4,5-bisphosphate 5-phosphatase, synaptojanin-like protein with an N-terminal Sa 781939 8198892 PAS_chr2-1_0424 Pichia pastoris GS115 Phosphatidylinositol 4,5-bisphosphate 5-phosphatase, synaptojanin-like protein with an N-terminal Sa XP_002491327.1 778979 R 644223 CDS PAS_chr2-1_0425 254568436 8198893 782340..783869 1 NC_012964.1 hypothetical protein 783869 8198893 PAS_chr2-1_0425 Pichia pastoris GS115 hypothetical protein XP_002491328.1 782340 D 644223 CDS PAS_chr2-1_0426 254568438 8198894 complement(783887..784558) 1 NC_012964.1 Putative protein of unknown function 784558 8198894 PAS_chr2-1_0426 Pichia pastoris GS115 Putative protein of unknown function XP_002491329.1 783887 R 644223 CDS PAS_chr2-1_0427 254568440 8198895 785091..786227 1 NC_012964.1 Putative high affinity iron transporter involved in transport of intravacuolar stores of iron 786227 8198895 PAS_chr2-1_0427 Pichia pastoris GS115 Putative high affinity iron transporter involved in transport of intravacuolar stores of iron XP_002491330.1 785091 D 644223 CDS PAS_chr2-1_0428 254568442 8198896 complement(786382..786780) 1 NC_012964.1 One of two nearly identical (see HTB1) histone H2B subtypes 786780 8198896 PAS_chr2-1_0428 Pichia pastoris GS115 One of two nearly identical (see HTB1) histone H2B subtypes XP_002491331.1 786382 R 644223 CDS PAS_chr2-1_0429 254568444 8198897 787331..787723 1 NC_012964.1 One of two nearly identical (see also HTA1) histone H2A subtypes 787723 8198897 PAS_chr2-1_0429 Pichia pastoris GS115 One of two nearly identical (see also HTA1) histone H2A subtypes XP_002491332.1 787331 D 644223 CDS PAS_chr2-1_0430 254568446 8198898 complement(788398..789351) 1 NC_012964.1 Essential subunit of the COMPASS (Set1C) complex 789351 8198898 PAS_chr2-1_0430 Pichia pastoris GS115 Essential subunit of the COMPASS (Set1C) complex XP_002491333.1 788398 R 644223 CDS PAS_chr2-1_0431 254568448 8198899 join(789530..789532,789587..789965,790022..790083) 1 NC_012964.1 Short-lived chaperone required for correct maturation of the 20S proteasome 790083 8198899 PAS_chr2-1_0431 Pichia pastoris GS115 Short-lived chaperone required for correct maturation of the 20S proteasome XP_002491334.1 789530 D 644223 CDS PAS_chr2-1_0432 254568450 8198900 790555..792825 1 NC_012964.1 hypothetical protein 792825 8198900 PAS_chr2-1_0432 Pichia pastoris GS115 hypothetical protein XP_002491335.1 790555 D 644223 CDS PAS_chr2-1_0433 254568452 8198901 complement(792882..793460) 1 NC_012964.1 Non-essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p) 793460 8198901 PAS_chr2-1_0433 Pichia pastoris GS115 Non-essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p) XP_002491336.1 792882 R 644223 CDS PAS_chr2-1_0835 254568454 8198902 complement(793591..794451) 1 NC_012964.1 hypothetical protein 794451 8198902 PAS_chr2-1_0835 Pichia pastoris GS115 hypothetical protein XP_002491337.1 793591 R 644223 CDS PAS_chr2-1_0434 254568456 8198110 794666..795667 1 NC_012964.1 hypothetical protein 795667 8198110 PAS_chr2-1_0434 Pichia pastoris GS115 hypothetical protein XP_002491338.1 794666 D 644223 CDS PAS_chr2-1_0840 254568458 8198903 complement(join(795783..796459,796520..796550)) 1 NC_012964.1 hypothetical protein 796550 8198903 PAS_chr2-1_0840 Pichia pastoris GS115 hypothetical protein XP_002491339.1 795783 R 644223 CDS PAS_chr2-1_0845 254568460 8198112 complement(797118..799319) 1 NC_012964.1 hypothetical protein 799319 8198112 PAS_chr2-1_0845 Pichia pastoris GS115 hypothetical protein XP_002491340.1 797118 R 644223 CDS PAS_chr2-1_0838 254568462 8198113 complement(799520..801073) 1 NC_012964.1 hypothetical protein 801073 8198113 PAS_chr2-1_0838 Pichia pastoris GS115 hypothetical protein XP_002491341.1 799520 R 644223 CDS PAS_chr2-1_0892 254568464 8198111 complement(join(801278..802400,802457..802485)) 1 NC_012964.1 hypothetical protein 802485 8198111 PAS_chr2-1_0892 Pichia pastoris GS115 hypothetical protein XP_002491342.1 801278 R 644223 CDS PAS_chr2-1_0435 254568466 8198961 complement(802606..804975) 1 NC_012964.1 Mitochondrial intermediate peptidase 804975 8198961 PAS_chr2-1_0435 Pichia pastoris GS115 Mitochondrial intermediate peptidase XP_002491343.1 802606 R 644223 CDS PAS_chr2-1_0436 254568468 8198904 complement(805214..807100) 1 NC_012964.1 Putative RNA binding protein 807100 8198904 PAS_chr2-1_0436 Pichia pastoris GS115 Putative RNA binding protein XP_002491344.1 805214 R 644223 CDS PAS_chr2-1_0437 254568470 8198905 complement(807591..808592) 1 NC_012964.1 Glyceraldehyde-3-phosphate dehydrogenase, isozyme 3, involved in glycolysis and gluconeogenesis 808592 8198905 PAS_chr2-1_0437 Pichia pastoris GS115 Glyceraldehyde-3-phosphate dehydrogenase, isozyme 3, involved in glycolysis and gluconeogenesis XP_002491345.1 807591 R 644223 CDS PAS_chr2-1_0439 254568472 8198906 810169..812562 1 NC_012964.1 DNA helicase involved in telomere formation and elongation 812562 8198906 PAS_chr2-1_0439 Pichia pastoris GS115 DNA helicase involved in telomere formation and elongation XP_002491346.1 810169 D 644223 CDS PAS_chr2-1_0440 254568474 8198907 complement(812607..815135) 1 NC_012964.1 hypothetical protein 815135 8198907 PAS_chr2-1_0440 Pichia pastoris GS115 hypothetical protein XP_002491347.1 812607 R 644223 CDS PAS_chr2-1_0441 254568476 8198908 815178..815870 1 NC_012964.1 hypothetical protein 815870 8198908 PAS_chr2-1_0441 Pichia pastoris GS115 hypothetical protein XP_002491348.1 815178 D 644223 CDS PAS_chr2-1_0442 254568478 8198909 complement(815920..816783) 1 NC_012964.1 Mitochondrial ribosomal protein of the large subunit 816783 8198909 PAS_chr2-1_0442 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002491349.1 815920 R 644223 CDS PAS_chr2-1_0443 254568480 8198910 817104..817610 1 NC_012964.1 hypothetical protein 817610 8198910 PAS_chr2-1_0443 Pichia pastoris GS115 hypothetical protein XP_002491350.1 817104 D 644223 CDS PAS_chr2-1_0444 254568482 8198911 complement(817636..819201) 1 NC_012964.1 hypothetical protein 819201 8198911 PAS_chr2-1_0444 Pichia pastoris GS115 hypothetical protein XP_002491351.1 817636 R 644223 CDS PAS_chr2-1_0445 254568484 8198912 820142..822631 1 NC_012964.1 Zinc-cluster protein 822631 8198912 PAS_chr2-1_0445 Pichia pastoris GS115 Zinc-cluster protein XP_002491352.1 820142 D 644223 CDS PAS_chr2-1_0446 254568486 8198913 complement(822641..823381) 1 NC_012964.1 hypothetical protein 823381 8198913 PAS_chr2-1_0446 Pichia pastoris GS115 hypothetical protein XP_002491353.1 822641 R 644223 CDS PAS_chr2-1_0447 254568488 8198914 complement(823510..826932) 1 NC_012964.1 RING finger protein involved in proteolytic control of sumoylated substrates 826932 8198914 PAS_chr2-1_0447 Pichia pastoris GS115 RING finger protein involved in proteolytic control of sumoylated substrates XP_002491354.1 823510 R 644223 CDS PAS_chr2-1_0448 254568490 8198915 complement(827202..827789) 1 NC_012964.1 Non-essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p) 827789 8198915 PAS_chr2-1_0448 Pichia pastoris GS115 Non-essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p) XP_002491355.1 827202 R 644223 CDS PAS_chr2-1_0449 254568492 8198916 complement(join(827978..828562,828640..828696)) 1 NC_012964.1 GTP binding protein (mammalian Ranp homolog) 828696 8198916 PAS_chr2-1_0449 Pichia pastoris GS115 GTP binding protein (mammalian Ranp homolog) XP_002491356.1 827978 R 644223 CDS PAS_chr2-1_0450 254568494 8198917 complement(join(828847..829097,829163..829249,829304..829334)) 1 NC_012964.1 Component of the U1 snRNP complex required for pre-mRNA splicing 829334 8198917 PAS_chr2-1_0450 Pichia pastoris GS115 Component of the U1 snRNP complex required for pre-mRNA splicing XP_002491357.1 828847 R 644223 CDS PAS_chr2-1_0451 254568496 8198918 join(829439..829541,829702..829964) 1 NC_012964.1 hypothetical protein 829964 8198918 PAS_chr2-1_0451 Pichia pastoris GS115 hypothetical protein XP_002491358.1 829439 D 644223 CDS PAS_chr2-1_0452 254568498 8198919 830337..831479 1 NC_012964.1 hypothetical protein 831479 8198919 PAS_chr2-1_0452 Pichia pastoris GS115 hypothetical protein XP_002491359.1 830337 D 644223 CDS PAS_chr2-1_0453 254568500 8198920 complement(831497..832984) 1 NC_012964.1 Cytoplasmic aldehyde dehydrogenase, involved in ethanol oxidation and beta-alanine biosynthesis 832984 8198920 PAS_chr2-1_0453 Pichia pastoris GS115 Cytoplasmic aldehyde dehydrogenase, involved in ethanol oxidation and beta-alanine biosynthesis XP_002491360.1 831497 R 644223 CDS PAS_chr2-1_0454 254568502 8198921 complement(833240..834484) 1 NC_012964.1 Major exo-1,3-beta-glucanase of the cell wall, involved in cell wall beta-glucan assembly 834484 8198921 PAS_chr2-1_0454 Pichia pastoris GS115 Major exo-1,3-beta-glucanase of the cell wall, involved in cell wall beta-glucan assembly XP_002491361.1 833240 R 644223 CDS PAS_chr2-1_0455 254568504 8198922 836411..837700 1 NC_012964.1 Protein required for assembly of U2 snRNP into the spliceosome, forms a complex with Hsh49p and Hsh1 837700 8198922 PAS_chr2-1_0455 Pichia pastoris GS115 Protein required for assembly of U2 snRNP into the spliceosome, forms a complex with Hsh49p and Hsh1 XP_002491362.1 836411 D 644223 CDS PAS_chr2-1_0456 254568506 8198923 838937..841117 1 NC_012964.1 hypothetical protein 841117 8198923 PAS_chr2-1_0456 Pichia pastoris GS115 hypothetical protein XP_002491363.1 838937 D 644223 CDS PAS_chr2-1_0457 254568508 8198924 841897..843246 1 NC_012964.1 Protein involved in ER-to-Golgi transport 843246 8198924 PAS_chr2-1_0457 Pichia pastoris GS115 Protein involved in ER-to-Golgi transport XP_002491364.1 841897 D 644223 CDS PAS_chr2-1_0458 254568510 8198925 complement(843267..844238) 1 NC_012964.1 Peroxin 20 844238 8198925 PAS_chr2-1_0458 Pichia pastoris GS115 Peroxin 20 XP_002491365.1 843267 R 644223 CDS PAS_chr2-1_0459 254568512 8198926 complement(844395..848588) 1 NC_012964.1 Subunit of TORC1, a rapamycin-sensitive complex involved in growth control 848588 8198926 PAS_chr2-1_0459 Pichia pastoris GS115 Subunit of TORC1, a rapamycin-sensitive complex involved in growth control XP_002491366.1 844395 R 644223 CDS PAS_chr2-1_0460 254568514 8198687 complement(join(848853..850930,850986..851091)) 1 NC_012964.1 Protein serine/threonine kinase 851091 8198687 PAS_chr2-1_0460 Pichia pastoris GS115 Protein serine/threonine kinase XP_002491367.1 848853 R 644223 CDS PAS_chr2-1_0461 254568516 8198384 join(851343..851363,851422..852165) 1 NC_012964.1 Putative protein of unknown function 852165 8198384 PAS_chr2-1_0461 Pichia pastoris GS115 Putative protein of unknown function XP_002491368.1 851343 D 644223 CDS PAS_chr2-1_0848 254568518 8198385 852462..853565 1 NC_012964.1 hypothetical protein 853565 8198385 PAS_chr2-1_0848 Pichia pastoris GS115 hypothetical protein XP_002491369.1 852462 D 644223 CDS PAS_chr2-1_0462 254568520 8198114 complement(853636..854826) 1 NC_012964.1 Mitochondrial protein of the mitochondrial carrier family 854826 8198114 PAS_chr2-1_0462 Pichia pastoris GS115 Mitochondrial protein of the mitochondrial carrier family XP_002491370.1 853636 R 644223 CDS PAS_chr2-1_0463 254568522 8198386 complement(854992..856332) 1 NC_012964.1 hypothetical protein 856332 8198386 PAS_chr2-1_0463 Pichia pastoris GS115 hypothetical protein XP_002491371.1 854992 R 644223 CDS PAS_chr2-1_0464 254568524 8198387 complement(856533..857486) 1 NC_012964.1 Metalloendopeptidase of the mitochondrial inner membrane 857486 8198387 PAS_chr2-1_0464 Pichia pastoris GS115 Metalloendopeptidase of the mitochondrial inner membrane XP_002491372.1 856533 R 644223 CDS PAS_chr2-1_0465 254568526 8198388 857749..858516 1 NC_012964.1 Basic zinc-finger protein 858516 8198388 PAS_chr2-1_0465 Pichia pastoris GS115 Basic zinc-finger protein XP_002491373.1 857749 D 644223 CDS PAS_chr2-1_0466 254568528 8198389 858759..860813 1 NC_012964.1 Triacylglycerol lipase involved in triacylglycerol mobilization and degradation 860813 8198389 PAS_chr2-1_0466 Pichia pastoris GS115 Triacylglycerol lipase involved in triacylglycerol mobilization and degradation XP_002491374.1 858759 D 644223 CDS PAS_chr2-1_0467 254568530 8198390 complement(join(860910..861122,861187..861195)) 1 NC_012964.1 Putative protein of unknown function 861195 8198390 PAS_chr2-1_0467 Pichia pastoris GS115 Putative protein of unknown function XP_002491375.1 860910 R 644223 CDS PAS_chr2-1_0468 254568532 8198391 862186..864123 1 NC_012964.1 Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), which phosphorylates the C-termina 864123 8198391 PAS_chr2-1_0468 Pichia pastoris GS115 Catalytic (alpha) subunit of C-terminal domain kinase I (CTDK-I), which phosphorylates the C-termina XP_002491376.1 862186 D 644223 CDS PAS_chr2-1_0849 254568534 8198392 864751..865905 1 NC_012964.1 hypothetical protein 865905 8198392 PAS_chr2-1_0849 Pichia pastoris GS115 hypothetical protein XP_002491377.1 864751 D 644223 CDS PAS_chr2-1_0469 254568536 8198115 866221..868857 1 NC_012964.1 Protein with similarity to hect domain E3 ubiquitin-protein ligases 868857 8198115 PAS_chr2-1_0469 Pichia pastoris GS115 Protein with similarity to hect domain E3 ubiquitin-protein ligases XP_002491378.1 866221 D 644223 CDS PAS_chr2-1_0850 254568538 8198393 join(869035..869080,869280..869878) 1 NC_012964.1 hypothetical protein 869878 8198393 PAS_chr2-1_0850 Pichia pastoris GS115 hypothetical protein XP_002491379.1 869035 D 644223 CDS PAS_chr2-1_0470 254568540 8198116 complement(join(870048..871290,871360..871679)) 1 NC_012964.1 Putative protein of unknown function 871679 8198116 PAS_chr2-1_0470 Pichia pastoris GS115 Putative protein of unknown function XP_002491380.1 870048 R 644223 CDS PAS_chr2-1_0471 254568542 8198394 complement(871761..873980) 1 NC_012964.1 Chloride channel localized to late-or post-Golgi vesicles, involved in iron metabolism 873980 8198394 PAS_chr2-1_0471 Pichia pastoris GS115 Chloride channel localized to late-or post-Golgi vesicles, involved in iron metabolism XP_002491381.1 871761 R 644223 CDS PAS_chr2-1_0472 254568544 8198395 875193..876245 1 NC_012964.1 Mitochondrial alcohol dehydrogenase isozyme III 876245 8198395 PAS_chr2-1_0472 Pichia pastoris GS115 Mitochondrial alcohol dehydrogenase isozyme III XP_002491382.1 875193 D 644223 CDS PAS_chr2-1_0473 254568546 8198396 complement(876267..877664) 1 NC_012964.1 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase 877664 8198396 PAS_chr2-1_0473 Pichia pastoris GS115 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase XP_002491383.1 876267 R 644223 CDS PAS_chr2-1_0474 254568548 8198397 join(878057..878084,878143..878465) 1 NC_012964.1 hypothetical protein 878465 8198397 PAS_chr2-1_0474 Pichia pastoris GS115 hypothetical protein XP_002491384.1 878057 D 644223 CDS PAS_chr2-1_0475 254568550 8198398 878787..879890 1 NC_012964.1 hypothetical protein 879890 8198398 PAS_chr2-1_0475 Pichia pastoris GS115 hypothetical protein XP_002491385.1 878787 D 644223 CDS PAS_chr2-1_0476 254568552 8198399 complement(880081..880479) 1 NC_012964.1 One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi which mediates 880479 8198399 PAS_chr2-1_0476 Pichia pastoris GS115 One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi which mediates XP_002491386.1 880081 R 644223 CDS PAS_chr2-1_0477 254568554 8198400 880717..882738 1 NC_012964.1 Protein of unknown function, required for normal growth rate at 15 degrees C 882738 8198400 PAS_chr2-1_0477 Pichia pastoris GS115 Protein of unknown function, required for normal growth rate at 15 degrees C XP_002491387.1 880717 D 644223 CDS PAS_chr2-1_0478 254568556 8198401 882818..883285 1 NC_012964.1 dUTPase, catalyzes hydrolysis of dUTP to dUMP and PPi 883285 8198401 PAS_chr2-1_0478 Pichia pastoris GS115 dUTPase, catalyzes hydrolysis of dUTP to dUMP and PPi XP_002491388.1 882818 D 644223 CDS PAS_chr2-1_0479 254568558 8198402 complement(883356..885707) 1 NC_012964.1 Pleckstrin homology domain containing protein proposed to function as a glycerol channel activator 885707 8198402 PAS_chr2-1_0479 Pichia pastoris GS115 Pleckstrin homology domain containing protein proposed to function as a glycerol channel activator XP_002491389.1 883356 R 644223 CDS PAS_chr2-1_0480 254568560 8198403 886085..887611 1 NC_012964.1 Mitochondrial inner membrane protein 887611 8198403 PAS_chr2-1_0480 Pichia pastoris GS115 Mitochondrial inner membrane protein XP_002491390.1 886085 D 644223 CDS PAS_chr2-1_0481 254568562 8198404 complement(887744..888178) 1 NC_012964.1 Ribosomal protein 59 of small subunit, required for ribosome assembly and 20S pre-rRNA processing 888178 8198404 PAS_chr2-1_0481 Pichia pastoris GS115 Ribosomal protein 59 of small subunit, required for ribosome assembly and 20S pre-rRNA processing XP_002491391.1 887744 R 644223 CDS PAS_chr2-1_0482 254568564 8198405 complement(888546..888938) 1 NC_012964.1 Protein component of the small (40S) ribosomal subunit 888938 8198405 PAS_chr2-1_0482 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002491392.1 888546 R 644223 CDS PAS_chr2-1_0483 254568566 8198406 889198..889353 1 NC_012964.1 hypothetical protein 889353 8198406 PAS_chr2-1_0483 Pichia pastoris GS115 hypothetical protein XP_002491393.1 889198 D 644223 CDS PAS_chr2-1_0484 254568568 8198407 complement(join(889514..890014,890072..890101)) 1 NC_012964.1 Protein localized to COPII vesicles, proposed to be involved in ER to Golgi transport 890101 8198407 PAS_chr2-1_0484 Pichia pastoris GS115 Protein localized to COPII vesicles, proposed to be involved in ER to Golgi transport XP_002491394.1 889514 R 644223 CDS PAS_chr2-1_0485 254568570 8198408 complement(890338..891480) 1 NC_012964.1 hypothetical protein 891480 8198408 PAS_chr2-1_0485 Pichia pastoris GS115 hypothetical protein XP_002491395.1 890338 R 644223 CDS PAS_chr2-1_0486 254568572 8198409 complement(891636..892022) 1 NC_012964.1 Fusion protein, identical to Rpl40Bp 892022 8198409 PAS_chr2-1_0486 Pichia pastoris GS115 Fusion protein, identical to Rpl40Bp XP_002491396.1 891636 R 644223 CDS PAS_chr2-1_0487 254568574 8198410 complement(892376..894361) 1 NC_012964.1 Leucyl aminopeptidase (leukotriene A4 hydrolase) with epoxide hydrolase activity 894361 8198410 PAS_chr2-1_0487 Pichia pastoris GS115 Leucyl aminopeptidase (leukotriene A4 hydrolase) with epoxide hydrolase activity XP_002491397.1 892376 R 644223 CDS PAS_chr2-1_0488 254568576 8198411 complement(895161..896915) 1 NC_012964.1 hypothetical protein 896915 8198411 PAS_chr2-1_0488 Pichia pastoris GS115 hypothetical protein XP_002491398.1 895161 R 644223 CDS PAS_chr2-1_0489 254568578 8198412 897626..899272 1 NC_012964.1 Myo-inositol transporter with strong similarity to the major myo-inositol transporter Itr1p 899272 8198412 PAS_chr2-1_0489 Pichia pastoris GS115 Myo-inositol transporter with strong similarity to the major myo-inositol transporter Itr1p XP_002491399.1 897626 D 644223 CDS PAS_chr2-1_0851 254568580 8198413 899500..901056 1 NC_012964.1 hypothetical protein 901056 8198413 PAS_chr2-1_0851 Pichia pastoris GS115 hypothetical protein XP_002491400.1 899500 D 644223 CDS PAS_chr2-1_0490 254568582 8198117 complement(901082..901777) 1 NC_012964.1 Nitrogen catabolite repression transcriptional regulator 901777 8198117 PAS_chr2-1_0490 Pichia pastoris GS115 Nitrogen catabolite repression transcriptional regulator XP_002491401.1 901082 R 644223 CDS PAS_chr2-1_0491 254568584 8198414 complement(902023..903654) 1 NC_012964.1 Deletion suppressor of mpt5 mutation 903654 8198414 PAS_chr2-1_0491 Pichia pastoris GS115 Deletion suppressor of mpt5 mutation XP_002491402.1 902023 R 644223 CDS PAS_chr2-1_0492 254568586 8198415 complement(903884..905917) 1 NC_012964.1 Protein whose overexpression suppresses growth defect of mutants lacking protein kinase A activity 905917 8198415 PAS_chr2-1_0492 Pichia pastoris GS115 Protein whose overexpression suppresses growth defect of mutants lacking protein kinase A activity XP_002491403.1 903884 R 644223 CDS PAS_chr2-1_0493 254568588 8198416 complement(907015..907581) 1 NC_012964.1 Essential NTPase required for small ribosome subunit synthesis 907581 8198416 PAS_chr2-1_0493 Pichia pastoris GS115 Essential NTPase required for small ribosome subunit synthesis XP_002491404.1 907015 R 644223 CDS PAS_chr2-1_0494 254568590 8198417 907752..908270 1 NC_012964.1 Component of the CCR4-NOT complex, which has multiple roles in regulating mRNA levels 908270 8198417 PAS_chr2-1_0494 Pichia pastoris GS115 Component of the CCR4-NOT complex, which has multiple roles in regulating mRNA levels XP_002491405.1 907752 D 644223 CDS PAS_chr2-1_0496 254568592 8198418 909283..911967 1 NC_012964.1 Alpha-adaptin, large subunit of the clathrin associated protein complex (AP-2) 911967 8198418 PAS_chr2-1_0496 Pichia pastoris GS115 Alpha-adaptin, large subunit of the clathrin associated protein complex (AP-2) XP_002491406.1 909283 D 644223 CDS PAS_chr2-1_0497 254568594 8198419 912167..912976 1 NC_012964.1 Single-domain racemase, possibly non-specific due to the lack of the second domain 912976 8198419 PAS_chr2-1_0497 Pichia pastoris GS115 Single-domain racemase, possibly non-specific due to the lack of the second domain XP_002491407.1 912167 D 644223 CDS PAS_chr2-1_0498 254568596 8198420 913187..914827 1 NC_012964.1 Dolichol kinase, catalyzes the terminal step in dolichyl monophosphate (Dol-P) biosynthesis 914827 8198420 PAS_chr2-1_0498 Pichia pastoris GS115 Dolichol kinase, catalyzes the terminal step in dolichyl monophosphate (Dol-P) biosynthesis XP_002491408.1 913187 D 644223 CDS PAS_chr2-1_0499 254568598 8198421 914975..915523 1 NC_012964.1 RNA binding protein required for maturation of tRNA and snRNA precursors 915523 8198421 PAS_chr2-1_0499 Pichia pastoris GS115 RNA binding protein required for maturation of tRNA and snRNA precursors XP_002491409.1 914975 D 644223 CDS PAS_chr2-1_0852 254568600 8198422 915728..916492 1 NC_012964.1 hypothetical protein 916492 8198422 PAS_chr2-1_0852 Pichia pastoris GS115 hypothetical protein XP_002491410.1 915728 D 644223 CDS PAS_chr2-1_0500 254568602 8198118 916639..918561 1 NC_012964.1 B subunit of DNA polymerase alpha-primase complex 918561 8198118 PAS_chr2-1_0500 Pichia pastoris GS115 B subunit of DNA polymerase alpha-primase complex XP_002491411.1 916639 D 644223 CDS PAS_chr2-1_0501 254568604 8198423 complement(918607..921273) 1 NC_012964.1 Plasma membrane protein that may be involved in osmotolerance 921273 8198423 PAS_chr2-1_0501 Pichia pastoris GS115 Plasma membrane protein that may be involved in osmotolerance XP_002491412.1 918607 R 644223 CDS PAS_chr2-1_0502 254568606 8198424 complement(922058..922588) 1 NC_012964.1 Thiol-specific peroxiredoxin, reduces hydroperoxides to protect against oxidative damage 922588 8198424 PAS_chr2-1_0502 Pichia pastoris GS115 Thiol-specific peroxiredoxin, reduces hydroperoxides to protect against oxidative damage XP_002491413.1 922058 R 644223 CDS PAS_chr2-1_0503 254568608 8198425 922783..923376 1 NC_012964.1 hypothetical protein 923376 8198425 PAS_chr2-1_0503 Pichia pastoris GS115 hypothetical protein XP_002491414.1 922783 D 644223 CDS PAS_chr2-1_0504 254568610 8198426 complement(923474..924223) 1 NC_012964.1 Peroxisomal membrane protein 924223 8198426 PAS_chr2-1_0504 Pichia pastoris GS115 Peroxisomal membrane protein XP_002491415.1 923474 R 644223 CDS PAS_chr2-1_0505 254568612 8198427 924621..925178 1 NC_012964.1 Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p) 925178 8198427 PAS_chr2-1_0505 Pichia pastoris GS115 Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p) XP_002491416.1 924621 D 644223 CDS PAS_chr2-1_0506 254568614 8198428 926087..927451 1 NC_012964.1 Mitochondrial aldehyde dehydrogenase 927451 8198428 PAS_chr2-1_0506 Pichia pastoris GS115 Mitochondrial aldehyde dehydrogenase XP_002491417.1 926087 D 644223 CDS PAS_chr2-1_0853 254568616 8198429 928316..929893 1 NC_012964.1 hypothetical protein 929893 8198429 PAS_chr2-1_0853 Pichia pastoris GS115 hypothetical protein XP_002491418.1 928316 D 644223 CDS PAS_chr2-1_0507 254568618 8198119 complement(929938..932559) 1 NC_012964.1 hypothetical protein 932559 8198119 PAS_chr2-1_0507 Pichia pastoris GS115 hypothetical protein XP_002491419.1 929938 R 644223 CDS PAS_chr2-1_0508 254568620 8198430 932716..935064 1 NC_012964.1 Transcription factor involved in regulation of cell cycle progression from G1 to S phase 935064 8198430 PAS_chr2-1_0508 Pichia pastoris GS115 Transcription factor involved in regulation of cell cycle progression from G1 to S phase XP_002491420.1 932716 D 644223 CDS PAS_chr2-1_0509 254568622 8198431 935281..937140 1 NC_012964.1 Putative protein of unknown function 937140 8198431 PAS_chr2-1_0509 Pichia pastoris GS115 Putative protein of unknown function XP_002491421.1 935281 D 644223 CDS PAS_chr2-1_0510 254568624 8198432 complement(937503..938045) 1 NC_012964.1 hypothetical protein 938045 8198432 PAS_chr2-1_0510 Pichia pastoris GS115 hypothetical protein XP_002491422.1 937503 R 644223 CDS PAS_chr2-1_0511 254568626 8198433 complement(938232..940616) 1 NC_012964.1 Homodimeric Zn2Cys6 zinc finger transcription factor 940616 8198433 PAS_chr2-1_0511 Pichia pastoris GS115 Homodimeric Zn2Cys6 zinc finger transcription factor XP_002491423.1 938232 R 644223 CDS PAS_chr2-1_0512 254568628 8198434 complement(940883..942427) 1 NC_012964.1 Subunit of DNA primase, which is required for DNA synthesis and double-strand break repair 942427 8198434 PAS_chr2-1_0512 Pichia pastoris GS115 Subunit of DNA primase, which is required for DNA synthesis and double-strand break repair XP_002491424.1 940883 R 644223 CDS PAS_chr2-1_0513 254568630 8198435 943543..944928 1 NC_012964.1 Member of the Sir2 family of NAD(+)-dependent protein deacetylases 944928 8198435 PAS_chr2-1_0513 Pichia pastoris GS115 Member of the Sir2 family of NAD(+)-dependent protein deacetylases XP_002491425.1 943543 D 644223 CDS PAS_chr2-1_0514 254568632 8198436 complement(945602..947137) 1 NC_012964.1 Peroxisomal integral membrane peroxin 947137 8198436 PAS_chr2-1_0514 Pichia pastoris GS115 Peroxisomal integral membrane peroxin XP_002491426.1 945602 R 644223 CDS PAS_chr2-1_0515 254568634 8198437 947619..948575 1 NC_012964.1 Kinetochore checkpoint WD40 repeat protein 948575 8198437 PAS_chr2-1_0515 Pichia pastoris GS115 Kinetochore checkpoint WD40 repeat protein XP_002491427.1 947619 D 644223 CDS PAS_chr2-1_0516 254568636 8198438 948873..951542 1 NC_012964.1 hypothetical protein 951542 8198438 PAS_chr2-1_0516 Pichia pastoris GS115 hypothetical protein XP_002491428.1 948873 D 644223 CDS PAS_chr2-1_0854 254568638 8198439 complement(951648..952586) 1 NC_012964.1 hypothetical protein 952586 8198439 PAS_chr2-1_0854 Pichia pastoris GS115 hypothetical protein XP_002491429.1 951648 R 644223 CDS PAS_chr2-1_0517 254568640 8198120 complement(952808..954424) 1 NC_012964.1 Nuclear protein that contains a SET-domain 954424 8198120 PAS_chr2-1_0517 Pichia pastoris GS115 Nuclear protein that contains a SET-domain XP_002491430.1 952808 R 644223 CDS PAS_chr2-1_0518 254568642 8198440 954655..956373 1 NC_012964.1 Hsp90 cochaperone, interacts with the Ssa group of the cytosolic Hsp70 chaperones 956373 8198440 PAS_chr2-1_0518 Pichia pastoris GS115 Hsp90 cochaperone, interacts with the Ssa group of the cytosolic Hsp70 chaperones XP_002491431.1 954655 D 644223 CDS PAS_chr2-1_0519 254568644 8198441 complement(956434..958623) 1 NC_012964.1 AMP-activated serine/threonine protein kinase found in a complex containing Snf4p and members of the 958623 8198441 PAS_chr2-1_0519 Pichia pastoris GS115 AMP-activated serine/threonine protein kinase found in a complex containing Snf4p and members of the XP_002491432.1 956434 R 644223 CDS PAS_chr2-1_0855 254568646 8198442 complement(958970..960613) 1 NC_012964.1 hypothetical protein 960613 8198442 PAS_chr2-1_0855 Pichia pastoris GS115 hypothetical protein XP_002491433.1 958970 R 644223 CDS PAS_chr2-1_0520 254568648 8198121 960837..962228 1 NC_012964.1 Mitochondrial 3-oxoacyl-[acyl-carrier-protein] reductase 962228 8198121 PAS_chr2-1_0520 Pichia pastoris GS115 Mitochondrial 3-oxoacyl-[acyl-carrier-protein] reductase XP_002491434.1 960837 D 644223 CDS PAS_chr2-1_0856 254568650 8198443 962329..963066 1 NC_012964.1 3-oxoacyl-[acyl-carrier-protein] reductase 963066 8198443 PAS_chr2-1_0856 Pichia pastoris GS115 3-oxoacyl-[acyl-carrier-protein] reductase XP_002491435.1 962329 D 644223 CDS PAS_chr2-1_0521 254568652 8198447 complement(963096..964544) 1 NC_012964.1 hypothetical protein 964544 8198447 PAS_chr2-1_0521 Pichia pastoris GS115 hypothetical protein XP_002491436.1 963096 R 644223 CDS PAS_chr2-1_0522 254568654 8198444 964758..965261 1 NC_012964.1 Protein that associates with ribosomes 965261 8198444 PAS_chr2-1_0522 Pichia pastoris GS115 Protein that associates with ribosomes XP_002491437.1 964758 D 644223 CDS PAS_chr2-1_0523 254568656 8198445 complement(965303..966538) 1 NC_012964.1 2'-O-methyltransferase responsible for modification of tRNA at position 4 966538 8198445 PAS_chr2-1_0523 Pichia pastoris GS115 2'-O-methyltransferase responsible for modification of tRNA at position 4 XP_002491438.1 965303 R 644223 CDS PAS_chr2-1_0858 254568658 8198302 complement(968187..968456) 1 NC_012964.1 hypothetical protein 968456 8198302 PAS_chr2-1_0858 Pichia pastoris GS115 hypothetical protein XP_002491439.1 968187 R 644223 CDS PAS_chr2-1_0526 254568660 8198928 complement(968612..970174) 1 NC_012964.1 Putative protein of unknown function 970174 8198928 PAS_chr2-1_0526 Pichia pastoris GS115 Putative protein of unknown function XP_002491440.1 968612 R 644223 CDS PAS_chr2-1_0527 254568662 8198686 complement(970548..971453) 1 NC_012964.1 hypothetical protein 971453 8198686 PAS_chr2-1_0527 Pichia pastoris GS115 hypothetical protein XP_002491441.1 970548 R 644223 CDS PAS_chr2-1_0528 254568664 8197968 971587..972120 1 NC_012964.1 hypothetical protein 972120 8197968 PAS_chr2-1_0528 Pichia pastoris GS115 hypothetical protein XP_002491442.1 971587 D 644223 CDS PAS_chr2-1_0530 254568666 8197969 979847..980890 1 NC_012964.1 Ornithine transporter of the mitochondrial inner membrane 980890 8197969 PAS_chr2-1_0530 Pichia pastoris GS115 Ornithine transporter of the mitochondrial inner membrane XP_002491443.1 979847 D 644223 CDS PAS_chr2-1_0531 254568668 8197970 complement(981012..986672) 1 NC_012964.1 hypothetical protein 986672 8197970 PAS_chr2-1_0531 Pichia pastoris GS115 hypothetical protein XP_002491444.1 981012 R 644223 CDS PAS_chr2-1_0532 254568670 8197971 986887..990498 1 NC_012964.1 One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi 990498 8197971 PAS_chr2-1_0532 Pichia pastoris GS115 One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi XP_002491445.1 986887 D 644223 CDS PAS_chr2-1_0533 254568672 8197972 complement(990518..991315) 1 NC_012964.1 Uroporphyrinogen III synthase 991315 8197972 PAS_chr2-1_0533 Pichia pastoris GS115 Uroporphyrinogen III synthase XP_002491446.1 990518 R 644223 CDS PAS_chr2-1_0534 254568674 8197973 991707..996299 1 NC_012964.1 hypothetical protein 996299 8197973 PAS_chr2-1_0534 Pichia pastoris GS115 hypothetical protein XP_002491447.1 991707 D 644223 CDS PAS_chr2-1_0535 254568676 8197974 complement(996347..998626) 1 NC_012964.1 Protein of the mitochondrial outer surface 998626 8197974 PAS_chr2-1_0535 Pichia pastoris GS115 Protein of the mitochondrial outer surface XP_002491448.1 996347 R 644223 CDS PAS_chr2-1_0536 254568678 8197975 complement(999138..999566) 1 NC_012964.1 hypothetical protein 999566 8197975 PAS_chr2-1_0536 Pichia pastoris GS115 hypothetical protein XP_002491449.1 999138 R 644223 CDS PAS_chr2-1_0537 254568680 8197976 999949..1002381 1 NC_012964.1 Gamma-adaptin, large subunit of the clathrin-associated protein (AP-1) complex 1002381 8197976 PAS_chr2-1_0537 Pichia pastoris GS115 Gamma-adaptin, large subunit of the clathrin-associated protein (AP-1) complex XP_002491450.1 999949 D 644223 CDS PAS_chr2-1_0538 254568682 8197977 1002589..1003113 1 NC_012964.1 Membrane protein that interacts with Yip1p to mediate membrane traffic 1003113 8197977 PAS_chr2-1_0538 Pichia pastoris GS115 Membrane protein that interacts with Yip1p to mediate membrane traffic XP_002491451.1 1002589 D 644223 CDS PAS_chr2-1_0539 254568684 8197978 1003892..1004593 1 NC_012964.1 hypothetical protein 1004593 8197978 PAS_chr2-1_0539 Pichia pastoris GS115 hypothetical protein XP_002491452.1 1003892 D 644223 CDS PAS_chr2-1_0540 254568686 8197979 complement(1004662..1005705) 1 NC_012964.1 hypothetical protein 1005705 8197979 PAS_chr2-1_0540 Pichia pastoris GS115 hypothetical protein XP_002491453.1 1004662 R 644223 CDS PAS_chr2-1_0541 254568688 8197980 complement(join(1005828..1007641,1007693..1007723)) 1 NC_012964.1 Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex 1007723 8197980 PAS_chr2-1_0541 Pichia pastoris GS115 Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex XP_002491454.1 1005828 R 644223 CDS PAS_chr2-1_0542 254568690 8197981 1008261..1009019 1 NC_012964.1 Putative benzil reductase 1009019 8197981 PAS_chr2-1_0542 Pichia pastoris GS115 Putative benzil reductase XP_002491455.1 1008261 D 644223 CDS PAS_chr2-1_0543 254568692 8197982 1009114..1009950 1 NC_012964.1 Uridylate kinase, catalyzes the seventh enzymatic step in the de novo biosynthesis of pyrimidines 1009950 8197982 PAS_chr2-1_0543 Pichia pastoris GS115 Uridylate kinase, catalyzes the seventh enzymatic step in the de novo biosynthesis of pyrimidines XP_002491456.1 1009114 D 644223 CDS PAS_chr2-1_0544 254568694 8197983 1010064..1011242 1 NC_012964.1 hypothetical protein 1011242 8197983 PAS_chr2-1_0544 Pichia pastoris GS115 hypothetical protein XP_002491457.1 1010064 D 644223 CDS PAS_chr2-1_0545 254568696 8197984 complement(1011273..1012361) 1 NC_012964.1 Peroxisomal acyl-CoA thioesterase likely to be involved in fatty acid oxidation 1012361 8197984 PAS_chr2-1_0545 Pichia pastoris GS115 Peroxisomal acyl-CoA thioesterase likely to be involved in fatty acid oxidation XP_002491458.1 1011273 R 644223 CDS PAS_chr2-1_0546 254568698 8197985 1012567..1013235 1 NC_012964.1 hypothetical protein 1013235 8197985 PAS_chr2-1_0546 Pichia pastoris GS115 hypothetical protein XP_002491459.1 1012567 D 644223 CDS PAS_chr2-1_0860 254568700 8197986 complement(1013247..1013981) 1 NC_012964.1 hypothetical protein 1013981 8197986 PAS_chr2-1_0860 Pichia pastoris GS115 hypothetical protein XP_002491460.1 1013247 R 644223 CDS PAS_chr2-1_0547 254568702 8198929 complement(1014001..1015059) 1 NC_012964.1 Bisphosphate-3'-nucleotidase, involved in salt tolerance and methionine biogenesis 1015059 8198929 PAS_chr2-1_0547 Pichia pastoris GS115 Bisphosphate-3'-nucleotidase, involved in salt tolerance and methionine biogenesis XP_002491461.1 1014001 R 644223 CDS PAS_chr2-1_0548 254568704 8197987 1015301..1016938 1 NC_012964.1 Protein containing SH3-domains, involved in establishing cell polarity and morphogenesis 1016938 8197987 PAS_chr2-1_0548 Pichia pastoris GS115 Protein containing SH3-domains, involved in establishing cell polarity and morphogenesis XP_002491462.1 1015301 D 644223 CDS PAS_chr2-1_0549 254568706 8197988 1017135..1018778 1 NC_012964.1 Alpha 1,3 glucosyltransferase 1018778 8197988 PAS_chr2-1_0549 Pichia pastoris GS115 Alpha 1,3 glucosyltransferase XP_002491463.1 1017135 D 644223 CDS PAS_chr2-1_0550 254568708 8197989 complement(1018795..1020897) 1 NC_012964.1 glycosyl hydrolase 1020897 8197989 PAS_chr2-1_0550 Pichia pastoris GS115 glycosyl hydrolase XP_002491464.1 1018795 R 644223 CDS PAS_chr2-1_0551 254568710 8197990 complement(1021643..1022404) 1 NC_012964.1 Putative protein of unknown function 1022404 8197990 PAS_chr2-1_0551 Pichia pastoris GS115 Putative protein of unknown function XP_002491465.1 1021643 R 644223 CDS PAS_chr2-1_0552 254568712 8197991 complement(1022711..1023589) 1 NC_012964.1 Protein involved in 20S proteasome assembly 1023589 8197991 PAS_chr2-1_0552 Pichia pastoris GS115 Protein involved in 20S proteasome assembly XP_002491466.1 1022711 R 644223 CDS PAS_chr2-1_0553 254568714 8197992 1023865..1024815 1 NC_012964.1 Deoxyhypusine hydroxylase, a HEAT-repeat containing metalloenzyme that catalyses hypusine formation 1024815 8197992 PAS_chr2-1_0553 Pichia pastoris GS115 Deoxyhypusine hydroxylase, a HEAT-repeat containing metalloenzyme that catalyses hypusine formation XP_002491467.1 1023865 D 644223 CDS PAS_chr2-1_0554 254568716 8197993 complement(1024879..1025250) 1 NC_012964.1 RNA polymerase I subunit A12.2 1025250 8197993 PAS_chr2-1_0554 Pichia pastoris GS115 RNA polymerase I subunit A12.2 XP_002491468.1 1024879 R 644223 CDS PAS_chr2-1_0555 254568718 8197994 1025457..1027139 1 NC_012964.1 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p 1027139 8197994 PAS_chr2-1_0555 Pichia pastoris GS115 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p XP_002491469.1 1025457 D 644223 CDS PAS_chr2-1_0556 254568720 8197995 1027373..1028659 1 NC_012964.1 Essential component of the Arp2/3 complex 1028659 8197995 PAS_chr2-1_0556 Pichia pastoris GS115 Essential component of the Arp2/3 complex XP_002491470.1 1027373 D 644223 CDS PAS_chr2-1_0557 254568722 8197996 1028918..1036171 1 NC_012964.1 PIK-related protein kinase and rapamycin target 1036171 8197996 PAS_chr2-1_0557 Pichia pastoris GS115 PIK-related protein kinase and rapamycin target XP_002491471.1 1028918 D 644223 CDS PAS_chr2-1_0558 254568724 8197997 complement(1036180..1036659) 1 NC_012964.1 hypothetical protein 1036659 8197997 PAS_chr2-1_0558 Pichia pastoris GS115 hypothetical protein XP_002491472.1 1036180 R 644223 CDS PAS_chr2-1_0559 254568726 8197998 1036964..1037920 1 NC_012964.1 Protein required, with binding partner Psr1p, for full activation of the general stress response 1037920 8197998 PAS_chr2-1_0559 Pichia pastoris GS115 Protein required, with binding partner Psr1p, for full activation of the general stress response XP_002491473.1 1036964 D 644223 CDS PAS_chr2-1_0560 254568728 8197999 complement(1038161..1039096) 1 NC_012964.1 Protein with similarity to human cystinosin, which is a H(+)-driven transporter 1039096 8197999 PAS_chr2-1_0560 Pichia pastoris GS115 Protein with similarity to human cystinosin, which is a H(+)-driven transporter XP_002491474.1 1038161 R 644223 CDS PAS_chr2-1_0861 254568730 8198000 1039801..1041354 1 NC_012964.1 hypothetical protein 1041354 8198000 PAS_chr2-1_0861 Pichia pastoris GS115 hypothetical protein XP_002491475.1 1039801 D 644223 CDS PAS_chr2-1_0862 254568732 8198930 1041524..1042639 1 NC_012964.1 hypothetical protein 1042639 8198930 PAS_chr2-1_0862 Pichia pastoris GS115 hypothetical protein XP_002491476.1 1041524 D 644223 CDS PAS_chr2-1_0562 254568734 8198931 complement(1042653..1045721) 1 NC_012964.1 Protein phosphatase with specificity for serine, threonine, and tyrosine residues 1045721 8198931 PAS_chr2-1_0562 Pichia pastoris GS115 Protein phosphatase with specificity for serine, threonine, and tyrosine residues XP_002491477.1 1042653 R 644223 CDS PAS_chr2-1_0563 254568736 8198001 complement(1046099..1047439) 1 NC_012964.1 Protein that activates Urm1p before its conjugation to proteins (urmylation) 1047439 8198001 PAS_chr2-1_0563 Pichia pastoris GS115 Protein that activates Urm1p before its conjugation to proteins (urmylation) XP_002491478.1 1046099 R 644223 CDS PAS_chr2-1_0564 254568738 8198002 complement(1047595..1048296) 1 NC_012964.1 Possible U3 snoRNP protein involved in maturation of pre-18S rRNA 1048296 8198002 PAS_chr2-1_0564 Pichia pastoris GS115 Possible U3 snoRNP protein involved in maturation of pre-18S rRNA XP_002491479.1 1047595 R 644223 CDS PAS_chr2-1_0863 254568740 8198003 complement(1048384..1049958) 1 NC_012964.1 hypothetical protein 1049958 8198003 PAS_chr2-1_0863 Pichia pastoris GS115 hypothetical protein XP_002491480.1 1048384 R 644223 CDS PAS_chr2-1_0565 254568742 8198932 join(1050161..1050165,1050217..1050469) 1 NC_012964.1 Putative protein of unknown function, identified based on comparison to related yeast species 1050469 8198932 PAS_chr2-1_0565 Pichia pastoris GS115 Putative protein of unknown function, identified based on comparison to related yeast species XP_002491481.1 1050161 D 644223 CDS PAS_chr2-1_0566 254568744 8198004 complement(1050600..1051772) 1 NC_012964.1 Vacuolar protein of unknown function 1051772 8198004 PAS_chr2-1_0566 Pichia pastoris GS115 Vacuolar protein of unknown function XP_002491482.1 1050600 R 644223 CDS PAS_chr2-1_0567 254568746 8198005 complement(1052455..1054134) 1 NC_012964.1 hypothetical protein 1054134 8198005 PAS_chr2-1_0567 Pichia pastoris GS115 hypothetical protein XP_002491483.1 1052455 R 644223 CDS PAS_chr2-1_0568 254568748 8198006 join(1054480..1054490,1054546..1054954) 1 NC_012964.1 Protein involved in error-free postreplication DNA repair 1054954 8198006 PAS_chr2-1_0568 Pichia pastoris GS115 Protein involved in error-free postreplication DNA repair XP_002491484.1 1054480 D 644223 CDS PAS_chr2-1_0569 254568750 8198007 complement(1054999..1055406) 1 NC_012964.1 hypothetical protein 1055406 8198007 PAS_chr2-1_0569 Pichia pastoris GS115 hypothetical protein XP_002491485.1 1054999 R 644223 CDS PAS_chr2-1_0570 254568752 8198008 complement(1055526..1057262) 1 NC_012964.1 Subunit of the origin recognition complex 1057262 8198008 PAS_chr2-1_0570 Pichia pastoris GS115 Subunit of the origin recognition complex XP_002491486.1 1055526 R 644223 CDS PAS_chr2-1_0571 254568754 8198009 1057622..1058152 1 NC_012964.1 Putative protein of unknown function 1058152 8198009 PAS_chr2-1_0571 Pichia pastoris GS115 Putative protein of unknown function XP_002491487.1 1057622 D 644223 CDS PAS_chr2-1_0572 254568756 8198010 complement(1058219..1059499) 1 NC_012964.1 AAA-type ATPase that is regulated by Vta1p 1059499 8198010 PAS_chr2-1_0572 Pichia pastoris GS115 AAA-type ATPase that is regulated by Vta1p XP_002491488.1 1058219 R 644223 CDS PAS_chr2-1_0573 254568758 8198011 complement(1059717..1060562) 1 NC_012964.1 Putative xylose and arabinose reductase 1060562 8198011 PAS_chr2-1_0573 Pichia pastoris GS115 Putative xylose and arabinose reductase XP_002491489.1 1059717 R 644223 CDS PAS_chr2-1_0574 254568760 8198012 complement(1060725..1063400) 1 NC_012964.1 Component of CORVET tethering complex 1063400 8198012 PAS_chr2-1_0574 Pichia pastoris GS115 Component of CORVET tethering complex XP_002491490.1 1060725 R 644223 CDS PAS_chr2-1_0576 254568762 8198013 1064764..1065897 1 NC_012964.1 Putative protein of unknown function 1065897 8198013 PAS_chr2-1_0576 Pichia pastoris GS115 Putative protein of unknown function XP_002491491.1 1064764 D 644223 CDS PAS_chr2-1_0577 254568764 8198014 complement(1065929..1066828) 1 NC_012964.1 Methyltransferase required for synthesis of diphthamide 1066828 8198014 PAS_chr2-1_0577 Pichia pastoris GS115 Methyltransferase required for synthesis of diphthamide XP_002491492.1 1065929 R 644223 CDS PAS_chr2-1_0578 254568766 8198015 1067001..1067600 1 NC_012964.1 hypothetical protein 1067600 8198015 PAS_chr2-1_0578 Pichia pastoris GS115 hypothetical protein XP_002491493.1 1067001 D 644223 CDS PAS_chr2-1_0579 254568768 8198016 complement(1067702..1069210) 1 NC_012964.1 Regulatory subunit of acetolactate synthase 1069210 8198016 PAS_chr2-1_0579 Pichia pastoris GS115 Regulatory subunit of acetolactate synthase XP_002491494.1 1067702 R 644223 CDS PAS_chr2-1_0864 254568770 8198017 complement(1069619..1070512) 1 NC_012964.1 hypothetical protein 1070512 8198017 PAS_chr2-1_0864 Pichia pastoris GS115 hypothetical protein XP_002491495.1 1069619 R 644223 CDS PAS_chr2-1_0580 254568772 8198933 complement(1070680..1071978) 1 NC_012964.1 Cytosolic NADP-specific isocitrate dehydrogenase 1071978 8198933 PAS_chr2-1_0580 Pichia pastoris GS115 Cytosolic NADP-specific isocitrate dehydrogenase XP_002491496.1 1070680 R 644223 CDS PAS_chr2-1_0581 254568774 8198018 complement(1072491..1074350) 1 NC_012964.1 Putative protein of unknown function 1074350 8198018 PAS_chr2-1_0581 Pichia pastoris GS115 Putative protein of unknown function XP_002491497.1 1072491 R 644223 CDS PAS_chr2-1_0582 254568776 8198019 complement(1074568..1078857) 1 NC_012964.1 hypothetical protein 1078857 8198019 PAS_chr2-1_0582 Pichia pastoris GS115 hypothetical protein XP_002491498.1 1074568 R 644223 CDS PAS_chr2-1_0583 254568778 8198020 complement(1079168..1080847) 1 NC_012964.1 Protein of unknown function that may interact with ribosomes, based on co-purification experiments 1080847 8198020 PAS_chr2-1_0583 Pichia pastoris GS115 Protein of unknown function that may interact with ribosomes, based on co-purification experiments XP_002491499.1 1079168 R 644223 CDS PAS_chr2-1_0584 254568780 8198021 complement(join(1081236..1081658,1081726..1081770)) 1 NC_012964.1 Protein component of the small (40S) ribosomal subunit 1081770 8198021 PAS_chr2-1_0584 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002491500.1 1081236 R 644223 CDS PAS_chr2-1_0585 254568782 8198022 complement(1082083..1082790) 1 NC_012964.1 Cis-golgi localized monothiol glutaredoxin that binds an iron-sulfur cluster 1082790 8198022 PAS_chr2-1_0585 Pichia pastoris GS115 Cis-golgi localized monothiol glutaredoxin that binds an iron-sulfur cluster XP_002491501.1 1082083 R 644223 CDS PAS_chr2-1_0586 254568784 8198023 1083396..1087019 1 NC_012964.1 Guanine nucleotide exchange factor (GEF) 1087019 8198023 PAS_chr2-1_0586 Pichia pastoris GS115 Guanine nucleotide exchange factor (GEF) XP_002491502.1 1083396 D 644223 CDS PAS_chr2-1_0587 254568786 8198024 complement(1087043..1089199) 1 NC_012964.1 hypothetical protein 1089199 8198024 PAS_chr2-1_0587 Pichia pastoris GS115 hypothetical protein XP_002491503.1 1087043 R 644223 CDS PAS_chr2-1_0588 254568788 8198025 1089503..1091332 1 NC_012964.1 Subunit (61/68 kDa) of TFIID and SAGA complexes 1091332 8198025 PAS_chr2-1_0588 Pichia pastoris GS115 Subunit (61/68 kDa) of TFIID and SAGA complexes XP_002491504.1 1089503 D 644223 CDS PAS_chr2-1_0865 254568790 8198026 1091444..1092418 1 NC_012964.1 hypothetical protein 1092418 8198026 PAS_chr2-1_0865 Pichia pastoris GS115 hypothetical protein XP_002491505.1 1091444 D 644223 CDS PAS_chr2-1_0589 254568792 8198934 complement(1092421..1092948) 1 NC_012964.1 Subunit of signal peptidase complex (Spc1p, Spc2p, Spc3p, Sec11p) 1092948 8198934 PAS_chr2-1_0589 Pichia pastoris GS115 Subunit of signal peptidase complex (Spc1p, Spc2p, Spc3p, Sec11p) XP_002491506.1 1092421 R 644223 CDS PAS_chr2-1_0590 254568794 8198027 1093425..1095194 1 NC_012964.1 Cytoplasmic protein of unknown function predicted to encode a DNA-3-methyladenine glycosidase II 1095194 8198027 PAS_chr2-1_0590 Pichia pastoris GS115 Cytoplasmic protein of unknown function predicted to encode a DNA-3-methyladenine glycosidase II XP_002491507.1 1093425 D 644223 CDS PAS_chr2-1_0591 254568796 8198028 complement(join(1095273..1097184,1097236..1097240)) 1 NC_012964.1 Coronin, cortical actin cytoskeletal component 1097240 8198028 PAS_chr2-1_0591 Pichia pastoris GS115 Coronin, cortical actin cytoskeletal component XP_002491508.1 1095273 R 644223 CDS PAS_chr2-1_0592 254568798 8198029 1098167..1104607 1 NC_012964.1 Presumed helicase required for RNA polymerase II transcription termination and processing of RNAs 1104607 8198029 PAS_chr2-1_0592 Pichia pastoris GS115 Presumed helicase required for RNA polymerase II transcription termination and processing of RNAs XP_002491509.1 1098167 D 644223 CDS PAS_chr2-1_0593 254568800 8198030 complement(1104732..1105814) 1 NC_012964.1 Dihydroorotase, catalyzes the third enzymatic step in the de novo biosynthesis of pyrimidines 1105814 8198030 PAS_chr2-1_0593 Pichia pastoris GS115 Dihydroorotase, catalyzes the third enzymatic step in the de novo biosynthesis of pyrimidines XP_002491510.1 1104732 R 644223 CDS PAS_chr2-1_0594 254568802 8198031 1106166..1107821 1 NC_012964.1 Protein required, along with Dph1p, Kti11p, Jjj3p, and Dph5p, for synthesis of diphthamide 1107821 8198031 PAS_chr2-1_0594 Pichia pastoris GS115 Protein required, along with Dph1p, Kti11p, Jjj3p, and Dph5p, for synthesis of diphthamide XP_002491511.1 1106166 D 644223 CDS PAS_chr2-1_0595 254568804 8198032 join(1107991..1108042,1108100..1108575) 1 NC_012964.1 Calcineurin B 1108575 8198032 PAS_chr2-1_0595 Pichia pastoris GS115 Calcineurin B XP_002491512.1 1107991 D 644223 CDS PAS_chr2-1_0596 254568806 8198033 1108732..1110570 1 NC_012964.1 ATG28, autophagy related protein 1110570 8198033 PAS_chr2-1_0596 Pichia pastoris GS115 ATG28, autophagy related protein XP_002491513.1 1108732 D 644223 CDS PAS_chr2-1_0597 254568808 8198034 complement(1110600..1110989) 1 NC_012964.1 hypothetical protein 1110989 8198034 PAS_chr2-1_0597 Pichia pastoris GS115 hypothetical protein XP_002491514.1 1110600 R 644223 CDS PAS_chr2-1_0598 254568810 8198035 1111288..1111806 1 NC_012964.1 hypothetical protein 1111806 8198035 PAS_chr2-1_0598 Pichia pastoris GS115 hypothetical protein XP_002491515.1 1111288 D 644223 CDS PAS_chr2-1_0599 254568812 8198036 1112231..1117801 1 NC_012964.1 Protein of unknown function with similarity to human DOCK proteins 1117801 8198036 PAS_chr2-1_0599 Pichia pastoris GS115 Protein of unknown function with similarity to human DOCK proteins XP_002491516.1 1112231 D 644223 CDS PAS_chr2-1_0601 254568814 8198037 1118839..1119921 1 NC_012964.1 Conserved nuclear regulatory subunit of Glc7p type 1 protein serine-threonine phosphatase (PP1) 1119921 8198037 PAS_chr2-1_0601 Pichia pastoris GS115 Conserved nuclear regulatory subunit of Glc7p type 1 protein serine-threonine phosphatase (PP1) XP_002491517.1 1118839 D 644223 CDS PAS_chr2-1_0602 254568816 8198038 1120137..1121294 1 NC_012964.1 hypothetical protein 1121294 8198038 PAS_chr2-1_0602 Pichia pastoris GS115 hypothetical protein XP_002491518.1 1120137 D 644223 CDS PAS_chr2-1_0866 254568818 8198039 1121508..1124423 1 NC_012964.1 hypothetical protein 1124423 8198039 PAS_chr2-1_0866 Pichia pastoris GS115 hypothetical protein XP_002491519.1 1121508 D 644223 CDS PAS_chr2-1_0603 254568820 8198935 join(1124542..1126582,1126695..1128574) 1 NC_012964.1 Putative helicase with limited sequence similarity to human Rb protein 1128574 8198935 PAS_chr2-1_0603 Pichia pastoris GS115 Putative helicase with limited sequence similarity to human Rb protein XP_002491520.1 1124542 D 644223 CDS PAS_chr2-1_0604 254568822 8198040 complement(1128580..1130700) 1 NC_012964.1 Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) 1130700 8198040 PAS_chr2-1_0604 Pichia pastoris GS115 Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) XP_002491521.1 1128580 R 644223 CDS PAS_chr2-1_0605 254568824 8198041 1131218..1131991 1 NC_012964.1 Putative Nedd8 ligase 1131991 8198041 PAS_chr2-1_0605 Pichia pastoris GS115 Putative Nedd8 ligase XP_002491522.1 1131218 D 644223 CDS PAS_chr2-1_0606 254568826 8198042 1132185..1135007 1 NC_012964.1 Nucleolar protein, specifically associated with the U3 snoRNA 1135007 8198042 PAS_chr2-1_0606 Pichia pastoris GS115 Nucleolar protein, specifically associated with the U3 snoRNA XP_002491523.1 1132185 D 644223 CDS PAS_chr2-1_0607 254568828 8198043 complement(1135426..1136013) 1 NC_012964.1 hypothetical protein 1136013 8198043 PAS_chr2-1_0607 Pichia pastoris GS115 hypothetical protein XP_002491524.1 1135426 R 644223 CDS PAS_chr2-1_0608 254568830 8199144 1136831..1137805 1 NC_012964.1 Activating gamma subunit of the AMP-activated Snf1p kinase complex 1137805 8199144 PAS_chr2-1_0608 Pichia pastoris GS115 Activating gamma subunit of the AMP-activated Snf1p kinase complex XP_002491525.1 1136831 D 644223 CDS PAS_chr2-1_0609 254568832 8199223 1138023..1140245 1 NC_012964.1 protein of OPT family transporter 1140245 8199223 PAS_chr2-1_0609 Pichia pastoris GS115 protein of OPT family transporter XP_002491526.1 1138023 D 644223 CDS PAS_chr2-1_0610 254568834 8199224 complement(1140339..1141229) 1 NC_012964.1 Putative protein of unknown function with similarity to dehydrogenases from other model organisms 1141229 8199224 PAS_chr2-1_0610 Pichia pastoris GS115 Putative protein of unknown function with similarity to dehydrogenases from other model organisms XP_002491527.1 1140339 R 644223 CDS PAS_chr2-1_0867 254568836 8199225 complement(1141446..1142579) 1 NC_012964.1 hypothetical protein 1142579 8199225 PAS_chr2-1_0867 Pichia pastoris GS115 hypothetical protein XP_002491528.1 1141446 R 644223 CDS PAS_chr2-1_0611 254568838 8198936 complement(1143124..1144578) 1 NC_012964.1 DNA Polymerase phi 1144578 8198936 PAS_chr2-1_0611 Pichia pastoris GS115 DNA Polymerase phi XP_002491529.1 1143124 R 644223 CDS PAS_chr2-1_0868 254568840 8199226 complement(1144913..1147795) 1 NC_012964.1 hypothetical protein 1147795 8199226 PAS_chr2-1_0868 Pichia pastoris GS115 hypothetical protein XP_002491530.1 1144913 R 644223 CDS PAS_chr2-1_0612 254568842 8198937 join(1148337..1148365,1148425..1148581) 1 NC_012964.1 hypothetical protein 1148581 8198937 PAS_chr2-1_0612 Pichia pastoris GS115 hypothetical protein XP_002491531.1 1148337 D 644223 CDS PAS_chr2-1_0613 254568844 8199227 1149058..1151337 1 NC_012964.1 Mitochondrial inner membrane half-type ATP-binding cassette (ABC) transporter 1151337 8199227 PAS_chr2-1_0613 Pichia pastoris GS115 Mitochondrial inner membrane half-type ATP-binding cassette (ABC) transporter XP_002491532.1 1149058 D 644223 CDS PAS_chr2-1_0869 254568846 8199228 1151443..1153419 1 NC_012964.1 hypothetical protein 1153419 8199228 PAS_chr2-1_0869 Pichia pastoris GS115 hypothetical protein XP_002491533.1 1151443 D 644223 CDS PAS_chr2-1_0614 254568848 8198938 complement(1153477..1153809) 1 NC_012964.1 hypothetical protein 1153809 8198938 PAS_chr2-1_0614 Pichia pastoris GS115 hypothetical protein XP_002491534.1 1153477 R 644223 CDS PAS_chr2-1_0615 254568850 8199229 1153901..1154887 1 NC_012964.1 Essential 18S rRNA dimethylase (dimethyladenosine transferase) 1154887 8199229 PAS_chr2-1_0615 Pichia pastoris GS115 Essential 18S rRNA dimethylase (dimethyladenosine transferase) XP_002491535.1 1153901 D 644223 CDS PAS_chr2-1_0616 254568852 8199230 complement(1154936..1156849) 1 NC_012964.1 Cytoplasmic protein of unknown function 1156849 8199230 PAS_chr2-1_0616 Pichia pastoris GS115 Cytoplasmic protein of unknown function XP_002491536.1 1154936 R 644223 CDS PAS_chr2-1_0617 254568854 8199231 join(1157057..1157128,1157191..1160334) 1 NC_012964.1 Nuclear pore protein involved in nuclear export of pre-tRNA 1160334 8199231 PAS_chr2-1_0617 Pichia pastoris GS115 Nuclear pore protein involved in nuclear export of pre-tRNA XP_002491537.1 1157057 D 644223 CDS PAS_chr2-1_0618 254568856 8199232 1160630..1162279 1 NC_012964.1 hypothetical protein 1162279 8199232 PAS_chr2-1_0618 Pichia pastoris GS115 hypothetical protein XP_002491538.1 1160630 D 644223 CDS PAS_chr2-1_0619 254568858 8199233 complement(1162332..1163306) 1 NC_012964.1 Subunit of heteropentameric Replication factor C (RF-C) 1163306 8199233 PAS_chr2-1_0619 Pichia pastoris GS115 Subunit of heteropentameric Replication factor C (RF-C) XP_002491539.1 1162332 R 644223 CDS PAS_chr2-1_0620 254568860 8199234 1163511..1163840 1 NC_012964.1 hypothetical protein 1163840 8199234 PAS_chr2-1_0620 Pichia pastoris GS115 hypothetical protein XP_002491540.1 1163511 D 644223 CDS PAS_chr2-1_0621 254568862 8199235 complement(1163942..1164382) 1 NC_012964.1 Mitochondrial ribosomal protein of the large subunit 1164382 8199235 PAS_chr2-1_0621 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002491541.1 1163942 R 644223 CDS PAS_chr2-1_0622 254568864 8199236 1164574..1164834 1 NC_012964.1 hypothetical protein 1164834 8199236 PAS_chr2-1_0622 Pichia pastoris GS115 hypothetical protein XP_002491542.1 1164574 D 644223 CDS PAS_chr2-1_0623 254568866 8199237 1165333..1167336 1 NC_012964.1 hypothetical protein 1167336 8199237 PAS_chr2-1_0623 Pichia pastoris GS115 hypothetical protein XP_002491543.1 1165333 D 644223 CDS PAS_chr2-1_0624 254568868 8199238 1167476..1168501 1 NC_012964.1 6-phosphofructo-2-kinase 1168501 8199238 PAS_chr2-1_0624 Pichia pastoris GS115 6-phosphofructo-2-kinase XP_002491544.1 1167476 D 644223 CDS PAS_chr2-1_0870 254568870 8199239 1168877..1170826 1 NC_012964.1 hypothetical protein 1170826 8199239 PAS_chr2-1_0870 Pichia pastoris GS115 hypothetical protein XP_002491545.1 1168877 D 644223 CDS PAS_chr2-1_0625 254568872 8198939 1171008..1175636 1 NC_012964.1 Type I transmembrane sorting receptor for multiple vacuolar hydrolases 1175636 8198939 PAS_chr2-1_0625 Pichia pastoris GS115 Type I transmembrane sorting receptor for multiple vacuolar hydrolases XP_002491546.1 1171008 D 644223 CDS PAS_chr2-1_0871 254568874 8199240 1176190..1177788 1 NC_012964.1 hypothetical protein 1177788 8199240 PAS_chr2-1_0871 Pichia pastoris GS115 hypothetical protein XP_002491547.1 1176190 D 644223 CDS PAS_chr2-1_0626 254568876 8198940 complement(1177848..1179938) 1 NC_012964.1 Glutamine-fructose-6-phosphate amidotransferase 1179938 8198940 PAS_chr2-1_0626 Pichia pastoris GS115 Glutamine-fructose-6-phosphate amidotransferase XP_002491548.1 1177848 R 644223 CDS PAS_chr2-1_0627 254568878 8199241 1180814..1183540 1 NC_012964.1 Non-SMC subunit of the condensin complex (Smc2p-Smc4p-Ycs4p-Brn1p-Ycg1p) 1183540 8199241 PAS_chr2-1_0627 Pichia pastoris GS115 Non-SMC subunit of the condensin complex (Smc2p-Smc4p-Ycs4p-Brn1p-Ycg1p) XP_002491549.1 1180814 D 644223 CDS PAS_chr2-1_0628 254568880 8199242 complement(1183548..1184579) 1 NC_012964.1 3-keto sterol reductase 1184579 8199242 PAS_chr2-1_0628 Pichia pastoris GS115 3-keto sterol reductase XP_002491550.1 1183548 R 644223 CDS PAS_chr2-1_0872 254568882 8199243 1184788..1185909 1 NC_012964.1 hypothetical protein 1185909 8199243 PAS_chr2-1_0872 Pichia pastoris GS115 hypothetical protein XP_002491551.1 1184788 D 644223 CDS PAS_chr2-1_0629 254568884 8198941 1186170..1189436 1 NC_012964.1 Protein involved in transcription-coupled repair nucleotide excision repair of UV-induced DNA lesion 1189436 8198941 PAS_chr2-1_0629 Pichia pastoris GS115 Protein involved in transcription-coupled repair nucleotide excision repair of UV-induced DNA lesion XP_002491552.1 1186170 D 644223 CDS PAS_chr2-1_0630 254568886 8199244 complement(1189451..1191010) 1 NC_012964.1 Microtubule effector required for tubulin heterodimer formation 1191010 8199244 PAS_chr2-1_0630 Pichia pastoris GS115 Microtubule effector required for tubulin heterodimer formation XP_002491553.1 1189451 R 644223 CDS PAS_chr2-1_0631 254568888 8199245 complement(join(1191152..1193020,1193072..1193092)) 1 NC_012964.1 Fimbrin, actin-bundling protein 1193092 8199245 PAS_chr2-1_0631 Pichia pastoris GS115 Fimbrin, actin-bundling protein XP_002491554.1 1191152 R 644223 CDS PAS_chr2-1_0632 254568890 8199246 complement(1193586..1194077) 1 NC_012964.1 hypothetical protein 1194077 8199246 PAS_chr2-1_0632 Pichia pastoris GS115 hypothetical protein XP_002491555.1 1193586 R 644223 CDS PAS_chr2-1_0633 254568892 8199247 complement(1194205..1194798) 1 NC_012964.1 Integral membrane component of endoplasmic reticulum-derived COPII-coated vesicles 1194798 8199247 PAS_chr2-1_0633 Pichia pastoris GS115 Integral membrane component of endoplasmic reticulum-derived COPII-coated vesicles XP_002491556.1 1194205 R 644223 CDS PAS_chr2-1_0634 254568894 8199248 complement(join(1195017..1195262,1195593..1195595)) 1 NC_012964.1 Protein component of the small (40S) ribosomal subunit 1195595 8199248 PAS_chr2-1_0634 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002491557.1 1195017 R 644223 CDS PAS_chr2-1_0635 254568896 8199249 complement(1196250..1197212) 1 NC_012964.1 Catalytic subunit of type 1 serine/threonine protein phosphatase 1197212 8199249 PAS_chr2-1_0635 Pichia pastoris GS115 Catalytic subunit of type 1 serine/threonine protein phosphatase XP_002491558.1 1196250 R 644223 CDS PAS_chr2-1_0873 254568898 8199250 1198117..1198770 1 NC_012964.1 hypothetical protein 1198770 8199250 PAS_chr2-1_0873 Pichia pastoris GS115 hypothetical protein XP_002491559.1 1198117 D 644223 CDS PAS_chr2-1_0636 254568900 8198942 complement(1198771..1199502) 1 NC_012964.1 Signal recognition particle (SRP) receptor beta subunit 1199502 8198942 PAS_chr2-1_0636 Pichia pastoris GS115 Signal recognition particle (SRP) receptor beta subunit XP_002491560.1 1198771 R 644223 CDS PAS_chr2-1_0637 254568902 8199251 1199732..1200856 1 NC_012964.1 Bifunctional chorismate synthase and flavin reductase 1200856 8199251 PAS_chr2-1_0637 Pichia pastoris GS115 Bifunctional chorismate synthase and flavin reductase XP_002491561.1 1199732 D 644223 CDS PAS_chr2-1_0638 254568904 8199252 complement(1200874..1202571) 1 NC_012964.1 hypothetical protein 1202571 8199252 PAS_chr2-1_0638 Pichia pastoris GS115 hypothetical protein XP_002491562.1 1200874 R 644223 CDS PAS_chr2-1_0639 254568906 8199253 1203282..1206119 1 NC_012964.1 Upstream serine/threonine kinase for the SNF1 complex 1206119 8199253 PAS_chr2-1_0639 Pichia pastoris GS115 Upstream serine/threonine kinase for the SNF1 complex XP_002491563.1 1203282 D 644223 CDS PAS_chr2-1_0640 254568908 8199254 complement(1206219..1206803) 1 NC_012964.1 Putative protein of unknown function 1206803 8199254 PAS_chr2-1_0640 Pichia pastoris GS115 Putative protein of unknown function XP_002491564.1 1206219 R 644223 CDS PAS_chr2-1_0641 254568910 8199255 complement(1207062..1209452) 1 NC_012964.1 Protein serine/threonine kinase required for vesicle formation in autophagy 1209452 8199255 PAS_chr2-1_0641 Pichia pastoris GS115 Protein serine/threonine kinase required for vesicle formation in autophagy XP_002491565.1 1207062 R 644223 CDS PAS_chr2-1_0642 254568912 8199256 complement(1210201..1211028) 1 NC_012964.1 hypothetical protein 1211028 8199256 PAS_chr2-1_0642 Pichia pastoris GS115 hypothetical protein XP_002491566.1 1210201 R 644223 CDS PAS_chr2-1_0643 254568914 8199257 complement(1211570..1214425) 1 NC_012964.1 Protein implicated in Mms22-dependent DNA repair during S phase 1214425 8199257 PAS_chr2-1_0643 Pichia pastoris GS115 Protein implicated in Mms22-dependent DNA repair during S phase XP_002491567.1 1211570 R 644223 CDS PAS_chr2-1_0644 254568916 8199258 join(1214975..1215004,1215057..1215920) 1 NC_012964.1 Peripheral membrane protein required for vesicular transport between ER and Golgi 1215920 8199258 PAS_chr2-1_0644 Pichia pastoris GS115 Peripheral membrane protein required for vesicular transport between ER and Golgi XP_002491568.1 1214975 D 644223 CDS PAS_chr2-1_0645 254568918 8199259 complement(1215929..1216597) 1 NC_012964.1 hypothetical protein 1216597 8199259 PAS_chr2-1_0645 Pichia pastoris GS115 hypothetical protein XP_002491569.1 1215929 R 644223 CDS PAS_chr2-1_0646 254568920 8199260 complement(1216786..1218780) 1 NC_012964.1 hypothetical protein 1218780 8199260 PAS_chr2-1_0646 Pichia pastoris GS115 hypothetical protein XP_002491570.1 1216786 R 644223 CDS PAS_chr2-1_0647 254568922 8199261 complement(1219087..1222329) 1 NC_012964.1 hypothetical protein 1222329 8199261 PAS_chr2-1_0647 Pichia pastoris GS115 hypothetical protein XP_002491571.1 1219087 R 644223 CDS PAS_chr2-1_0648 254568924 8199262 1222500..1223105 1 NC_012964.1 Protein component of the H/ACA snoRNP pseudouridylase complex 1223105 8199262 PAS_chr2-1_0648 Pichia pastoris GS115 Protein component of the H/ACA snoRNP pseudouridylase complex XP_002491572.1 1222500 D 644223 CDS PAS_chr2-1_0649 254568926 8199263 1223933..1225567 1 NC_012964.1 Acetate transporter required for normal sporulation 1225567 8199263 PAS_chr2-1_0649 Pichia pastoris GS115 Acetate transporter required for normal sporulation XP_002491573.1 1223933 D 644223 CDS PAS_chr2-1_0874 254568928 8199264 1226589..1227395 1 NC_012964.1 hypothetical protein 1227395 8199264 PAS_chr2-1_0874 Pichia pastoris GS115 hypothetical protein XP_002491574.1 1226589 D 644223 CDS PAS_chr2-1_0650 254568930 8198943 complement(join(1227471..1227874,1227940..1227973)) 1 NC_012964.1 hypothetical protein 1227973 8198943 PAS_chr2-1_0650 Pichia pastoris GS115 hypothetical protein XP_002491575.1 1227471 R 644223 CDS PAS_chr2-1_0651 254568932 8199265 1228235..1232497 1 NC_012964.1 Key endocytic protein involved in a network of interactions with other endocytic proteins 1232497 8199265 PAS_chr2-1_0651 Pichia pastoris GS115 Key endocytic protein involved in a network of interactions with other endocytic proteins XP_002491576.1 1228235 D 644223 CDS PAS_chr2-1_0652 254568934 8199266 1232741..1235398 1 NC_012964.1 Arginine/alanine aminopeptidase, overproduction stimulates glycogen accumulation 1235398 8199266 PAS_chr2-1_0652 Pichia pastoris GS115 Arginine/alanine aminopeptidase, overproduction stimulates glycogen accumulation XP_002491577.1 1232741 D 644223 CDS PAS_chr2-1_0653 254568936 8199267 1235478..1236497 1 NC_012964.1 Mitochondrial cruciform cutting endonuclease 1236497 8199267 PAS_chr2-1_0653 Pichia pastoris GS115 Mitochondrial cruciform cutting endonuclease XP_002491578.1 1235478 D 644223 CDS PAS_chr2-1_0654 254568938 8199268 complement(1236558..1237493) 1 NC_012964.1 hypothetical protein 1237493 8199268 PAS_chr2-1_0654 Pichia pastoris GS115 hypothetical protein XP_002491579.1 1236558 R 644223 CDS PAS_chr2-1_0655 254568940 8199269 1237820..1239367 1 NC_012964.1 Nucleolar protein, component of the small subunit (SSU) processome 1239367 8199269 PAS_chr2-1_0655 Pichia pastoris GS115 Nucleolar protein, component of the small subunit (SSU) processome XP_002491580.1 1237820 D 644223 CDS PAS_chr2-1_0656 254568942 8199270 complement(1239435..1242320) 1 NC_012964.1 Subunit of the 26S proteasome, substrate of the N-acetyltransferase Nat1p 1242320 8199270 PAS_chr2-1_0656 Pichia pastoris GS115 Subunit of the 26S proteasome, substrate of the N-acetyltransferase Nat1p XP_002491581.1 1239435 R 644223 CDS PAS_chr2-1_0657 254568944 8199271 complement(1242482..1243891) 1 NC_012964.1 3-phosphoglycerate dehydrogenase, catalyzes the first step in serine and glycine biosynthesis 1243891 8199271 PAS_chr2-1_0657 Pichia pastoris GS115 3-phosphoglycerate dehydrogenase, catalyzes the first step in serine and glycine biosynthesis XP_002491582.1 1242482 R 644223 CDS PAS_chr2-1_0658 254568946 8199272 1244315..1244929 1 NC_012964.1 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl15Ap 1244929 8199272 PAS_chr2-1_0658 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl15Ap XP_002491583.1 1244315 D 644223 CDS PAS_chr2-1_0659 254568948 8199273 complement(1245248..1246975) 1 NC_012964.1 Proline permease, required for high-affinity transport of proline 1246975 8199273 PAS_chr2-1_0659 Pichia pastoris GS115 Proline permease, required for high-affinity transport of proline XP_002491584.1 1245248 R 644223 CDS PAS_chr2-1_0660 254568950 8199274 join(1248508..1249582,1249630..1250282) 1 NC_012964.1 Enzyme of 'de novo' purine biosynthesis 1250282 8199274 PAS_chr2-1_0660 Pichia pastoris GS115 Enzyme of 'de novo' purine biosynthesis XP_002491585.1 1248508 D 644223 CDS PAS_chr2-1_0661 254568952 8199275 complement(1250369..1256005) 1 NC_012964.1 Catalytic subunit of 1,3-beta-D-glucan synthase 1256005 8199275 PAS_chr2-1_0661 Pichia pastoris GS115 Catalytic subunit of 1,3-beta-D-glucan synthase XP_002491586.1 1250369 R 644223 CDS PAS_chr2-1_0662 254568954 8199276 complement(1257187..1259883) 1 NC_012964.1 Large subunit of the nuclear mRNA cap-binding protein complex 1259883 8199276 PAS_chr2-1_0662 Pichia pastoris GS115 Large subunit of the nuclear mRNA cap-binding protein complex XP_002491587.1 1257187 R 644223 CDS PAS_chr2-1_0875 254568956 8199277 1260044..1260379 1 NC_012964.1 hypothetical protein 1260379 8199277 PAS_chr2-1_0875 Pichia pastoris GS115 hypothetical protein XP_002491588.1 1260044 D 644223 CDS PAS_chr2-1_0664 254568958 8198944 1261530..1264751 1 NC_012964.1 hypothetical protein 1264751 8198944 PAS_chr2-1_0664 Pichia pastoris GS115 hypothetical protein XP_002491589.1 1261530 D 644223 CDS PAS_chr2-1_0665 254568960 8199278 complement(1264764..1266164) 1 NC_012964.1 hypothetical protein 1266164 8199278 PAS_chr2-1_0665 Pichia pastoris GS115 hypothetical protein XP_002491590.1 1264764 R 644223 CDS PAS_chr2-1_0666 254568962 8199279 complement(1266334..1268724) 1 NC_012964.1 F-box protein required for G1/S and G2/M transition 1268724 8199279 PAS_chr2-1_0666 Pichia pastoris GS115 F-box protein required for G1/S and G2/M transition XP_002491591.1 1266334 R 644223 CDS PAS_chr2-1_0876 254568964 8199280 complement(1268895..1269494) 1 NC_012964.1 hypothetical protein 1269494 8199280 PAS_chr2-1_0876 Pichia pastoris GS115 hypothetical protein XP_002491592.1 1268895 R 644223 CDS PAS_chr2-1_0667 254568966 8198945 complement(1269941..1271977) 1 NC_012964.1 Protein involved in negative regulation of transcription of iron regulon 1271977 8198945 PAS_chr2-1_0667 Pichia pastoris GS115 Protein involved in negative regulation of transcription of iron regulon XP_002491593.1 1269941 R 644223 CDS PAS_chr2-1_0668 254568968 8199281 complement(1272221..1274638) 1 NC_012964.1 Vacuolar membrane protein involved in vacuolar polyphosphate accumulation 1274638 8199281 PAS_chr2-1_0668 Pichia pastoris GS115 Vacuolar membrane protein involved in vacuolar polyphosphate accumulation XP_002491594.1 1272221 R 644223 CDS PAS_chr2-1_0669 254568970 8199282 1275211..1275855 1 NC_012964.1 GTPase 1275855 8199282 PAS_chr2-1_0669 Pichia pastoris GS115 GTPase XP_002491595.1 1275211 D 644223 CDS PAS_chr2-1_0670 254568972 8199283 1276102..1276836 1 NC_012964.1 Essential protein of the mitochondrial intermembrane space (IMS) 1276836 8199283 PAS_chr2-1_0670 Pichia pastoris GS115 Essential protein of the mitochondrial intermembrane space (IMS) XP_002491596.1 1276102 D 644223 CDS PAS_chr2-1_0671 254568974 8199284 complement(1276905..1278896) 1 NC_012964.1 hypothetical protein 1278896 8199284 PAS_chr2-1_0671 Pichia pastoris GS115 hypothetical protein XP_002491597.1 1276905 R 644223 CDS PAS_chr2-1_0672 254568976 8199285 1279120..1280481 1 NC_012964.1 Scaffold protein responsible for pre-autophagosomal structure organization 1280481 8199285 PAS_chr2-1_0672 Pichia pastoris GS115 Scaffold protein responsible for pre-autophagosomal structure organization XP_002491598.1 1279120 D 644223 CDS PAS_chr2-1_0673 254568978 8199286 complement(1280566..1281951) 1 NC_012964.1 Mitochondrial threonyl-tRNA synthetase 1281951 8199286 PAS_chr2-1_0673 Pichia pastoris GS115 Mitochondrial threonyl-tRNA synthetase XP_002491599.1 1280566 R 644223 CDS PAS_chr2-1_0674 254568980 8199287 1282251..1283348 1 NC_012964.1 Constituent of Paf1 complex with RNA polymerase II, Paf1p, Hpr1p, Ctr9, Leo1, Rtf1 and Ccr4p 1283348 8199287 PAS_chr2-1_0674 Pichia pastoris GS115 Constituent of Paf1 complex with RNA polymerase II, Paf1p, Hpr1p, Ctr9, Leo1, Rtf1 and Ccr4p XP_002491600.1 1282251 D 644223 CDS PAS_chr2-1_0675 254568982 8199288 1283576..1285360 1 NC_012964.1 Mitochondrial inner membrane protein with similarity to Mdm32p 1285360 8199288 PAS_chr2-1_0675 Pichia pastoris GS115 Mitochondrial inner membrane protein with similarity to Mdm32p XP_002491601.1 1283576 D 644223 CDS PAS_chr2-1_0877 254568984 8199289 1285570..1286010 1 NC_012964.1 hypothetical protein 1286010 8199289 PAS_chr2-1_0877 Pichia pastoris GS115 hypothetical protein XP_002491602.1 1285570 D 644223 CDS PAS_chr2-1_0676 254568986 8198946 complement(1286049..1286999) 1 NC_012964.1 hypothetical protein 1286999 8198946 PAS_chr2-1_0676 Pichia pastoris GS115 hypothetical protein XP_002491603.1 1286049 R 644223 CDS PAS_chr2-1_0677 254568988 8199290 1288198..1291224 1 NC_012964.1 Karyopherin, a carrier protein involved in nuclear import of proteins 1291224 8199290 PAS_chr2-1_0677 Pichia pastoris GS115 Karyopherin, a carrier protein involved in nuclear import of proteins XP_002491604.1 1288198 D 644223 CDS PAS_chr2-1_0678 254568990 8199291 complement(1291257..1293500) 1 NC_012964.1 Protein involved in the transcription of 35S rRNA genes by RNA polymerase I 1293500 8199291 PAS_chr2-1_0678 Pichia pastoris GS115 Protein involved in the transcription of 35S rRNA genes by RNA polymerase I XP_002491605.1 1291257 R 644223 CDS PAS_chr2-1_0679 254568992 8199292 complement(join(1293942..1296013,1296066..1296111)) 1 NC_012964.1 Tryptophan synthase involved in tryptophan biosynthesis 1296111 8199292 PAS_chr2-1_0679 Pichia pastoris GS115 Tryptophan synthase involved in tryptophan biosynthesis XP_002491606.1 1293942 R 644223 CDS PAS_chr2-1_0680 254568994 8199293 1296486..1298102 1 NC_012964.1 hypothetical protein 1298102 8199293 PAS_chr2-1_0680 Pichia pastoris GS115 hypothetical protein XP_002491607.1 1296486 D 644223 CDS PAS_chr2-1_0681 254568996 8199294 1298333..1298950 1 NC_012964.1 Xanthine-guanine phosphoribosyl transferase 1298950 8199294 PAS_chr2-1_0681 Pichia pastoris GS115 Xanthine-guanine phosphoribosyl transferase XP_002491608.1 1298333 D 644223 CDS PAS_chr2-1_0682 254568998 8199295 complement(1298994..1301303) 1 NC_012964.1 hypothetical protein 1301303 8199295 PAS_chr2-1_0682 Pichia pastoris GS115 hypothetical protein XP_002491609.1 1298994 R 644223 CDS PAS_chr2-1_0683 254569000 8199296 complement(1301493..1302221) 1 NC_012964.1 Mitochondrial ribosomal protein of the small subunit 1302221 8199296 PAS_chr2-1_0683 Pichia pastoris GS115 Mitochondrial ribosomal protein of the small subunit XP_002491610.1 1301493 R 644223 CDS PAS_chr2-1_0684 254569002 8199297 1302426..1303598 1 NC_012964.1 Histidinol-phosphate aminotransferase, catalyzes the seventh step in histidine biosynthesis 1303598 8199297 PAS_chr2-1_0684 Pichia pastoris GS115 Histidinol-phosphate aminotransferase, catalyzes the seventh step in histidine biosynthesis XP_002491611.1 1302426 D 644223 CDS PAS_chr2-1_0685 254569004 8199298 complement(1303662..1304846) 1 NC_012964.1 hypothetical protein 1304846 8199298 PAS_chr2-1_0685 Pichia pastoris GS115 hypothetical protein XP_002491612.1 1303662 R 644223 CDS PAS_chr2-1_0686 254569006 8199299 complement(1305138..1305815) 1 NC_012964.1 hypothetical protein 1305815 8199299 PAS_chr2-1_0686 Pichia pastoris GS115 hypothetical protein XP_002491613.1 1305138 R 644223 CDS PAS_chr2-1_0687 254569008 8198306 1306142..1306618 1 NC_012964.1 Vacuolar ATPase V0 domain subunit c', involved in proton transport activity 1306618 8198306 PAS_chr2-1_0687 Pichia pastoris GS115 Vacuolar ATPase V0 domain subunit c', involved in proton transport activity XP_002491614.1 1306142 D 644223 CDS PAS_chr2-1_0688 254569010 8198307 complement(1306663..1308063) 1 NC_012964.1 Essential protein involved in transcription regulation 1308063 8198307 PAS_chr2-1_0688 Pichia pastoris GS115 Essential protein involved in transcription regulation XP_002491615.1 1306663 R 644223 CDS PAS_chr2-1_0689 254569012 8198308 1308284..1309303 1 NC_012964.1 Putative protein kinase that exhibits Akr1p-dependent palmitoylation 1309303 8198308 PAS_chr2-1_0689 Pichia pastoris GS115 Putative protein kinase that exhibits Akr1p-dependent palmitoylation XP_002491616.1 1308284 D 644223 CDS PAS_chr2-1_0690 254569014 8198309 1309469..1309843 1 NC_012964.1 hypothetical protein 1309843 8198309 PAS_chr2-1_0690 Pichia pastoris GS115 hypothetical protein XP_002491617.1 1309469 D 644223 CDS PAS_chr2-1_0691 254569016 8198310 complement(1310061..1310462) 1 NC_012964.1 Constituent of the mitochondrial import motor associated with the presequence translocase 1310462 8198310 PAS_chr2-1_0691 Pichia pastoris GS115 Constituent of the mitochondrial import motor associated with the presequence translocase XP_002491618.1 1310061 R 644223 CDS PAS_chr2-1_0692 254569018 8198311 1310661..1311632 1 NC_012964.1 Protein with a role in UDP-galactose transport to the Golgi lumen 1311632 8198311 PAS_chr2-1_0692 Pichia pastoris GS115 Protein with a role in UDP-galactose transport to the Golgi lumen XP_002491619.1 1310661 D 644223 CDS PAS_chr2-1_0693 254569020 8198312 complement(1311689..1312477) 1 NC_012964.1 hypothetical protein 1312477 8198312 PAS_chr2-1_0693 Pichia pastoris GS115 hypothetical protein XP_002491620.1 1311689 R 644223 CDS PAS_chr2-1_0878 254569022 8198313 complement(1312999..1314957) 1 NC_012964.1 hypothetical protein 1314957 8198313 PAS_chr2-1_0878 Pichia pastoris GS115 hypothetical protein XP_002491621.1 1312999 R 644223 CDS PAS_chr2-1_0694 254569024 8198947 complement(1315269..1317470) 1 NC_012964.1 Acyltransferase that catalyzes diacylglycerol esterification 1317470 8198947 PAS_chr2-1_0694 Pichia pastoris GS115 Acyltransferase that catalyzes diacylglycerol esterification XP_002491622.1 1315269 R 644223 CDS PAS_chr2-1_0695 254569026 8198314 1317643..1318329 1 NC_012964.1 Phosphatidylinositol synthase, required for biosynthesis of phosphatidylinositol 1318329 8198314 PAS_chr2-1_0695 Pichia pastoris GS115 Phosphatidylinositol synthase, required for biosynthesis of phosphatidylinositol XP_002491623.1 1317643 D 644223 CDS PAS_chr2-1_0697 254569028 8198315 complement(1321132..1325619) 1 NC_012964.1 Catalytic subunit of DNA polymerase zeta, which is involved in DNA repair and translesion synthesis 1325619 8198315 PAS_chr2-1_0697 Pichia pastoris GS115 Catalytic subunit of DNA polymerase zeta, which is involved in DNA repair and translesion synthesis XP_002491624.1 1321132 R 644223 CDS PAS_chr2-1_0879 254569030 8198316 1325828..1326445 1 NC_012964.1 hypothetical protein 1326445 8198316 PAS_chr2-1_0879 Pichia pastoris GS115 hypothetical protein XP_002491625.1 1325828 D 644223 CDS PAS_chr2-1_0698 254569032 8198948 1326679..1327614 1 NC_012964.1 Putative protein of unknown function with similarity to human thiosulfate sulfurtransferase 1327614 8198948 PAS_chr2-1_0698 Pichia pastoris GS115 Putative protein of unknown function with similarity to human thiosulfate sulfurtransferase XP_002491626.1 1326679 D 644223 CDS PAS_chr2-1_0699 254569034 8198317 complement(1327617..1330859) 1 NC_012964.1 GPI inositol deacylase of the ER that negatively regulates COPII vesicle formation 1330859 8198317 PAS_chr2-1_0699 Pichia pastoris GS115 GPI inositol deacylase of the ER that negatively regulates COPII vesicle formation XP_002491627.1 1327617 R 644223 CDS PAS_chr2-1_0700 254569036 8198318 1331472..1333763 1 NC_012964.1 Integral plasma membrane protein required for axial budding in haploid cells 1333763 8198318 PAS_chr2-1_0700 Pichia pastoris GS115 Integral plasma membrane protein required for axial budding in haploid cells XP_002491628.1 1331472 D 644223 CDS PAS_chr2-1_0701 254569038 8198319 complement(1333919..1335460) 1 NC_012964.1 hypothetical protein 1335460 8198319 PAS_chr2-1_0701 Pichia pastoris GS115 hypothetical protein XP_002491629.1 1333919 R 644223 CDS PAS_chr2-1_0702 254569040 8198320 1336344..1337369 1 NC_012964.1 Protein that recognizes and binds damaged DNA during nucleotide excision repair 1337369 8198320 PAS_chr2-1_0702 Pichia pastoris GS115 Protein that recognizes and binds damaged DNA during nucleotide excision repair XP_002491630.1 1336344 D 644223 CDS PAS_chr2-1_0703 254569042 8198321 1337795..1338796 1 NC_012964.1 Putative protein of unknown function 1338796 8198321 PAS_chr2-1_0703 Pichia pastoris GS115 Putative protein of unknown function XP_002491631.1 1337795 D 644223 CDS PAS_chr2-1_0704 254569044 8198322 complement(1338868..1339683) 1 NC_012964.1 hypothetical protein 1339683 8198322 PAS_chr2-1_0704 Pichia pastoris GS115 hypothetical protein XP_002491632.1 1338868 R 644223 CDS PAS_chr2-1_0705 254569046 8198323 1339815..1340102 1 NC_012964.1 hypothetical protein 1340102 8198323 PAS_chr2-1_0705 Pichia pastoris GS115 hypothetical protein XP_002491633.1 1339815 D 644223 CDS PAS_chr2-1_0706 254569048 8198324 complement(1340149..1342107) 1 NC_012964.1 Putative protein of unknown function 1342107 8198324 PAS_chr2-1_0706 Pichia pastoris GS115 Putative protein of unknown function XP_002491634.1 1340149 R 644223 CDS PAS_chr2-1_0707 254569050 8198325 complement(1342507..1344690) 1 NC_012964.1 Probable serine protease of the SPS plasma membrane amino acid sensor system (Ssy1p-Ptr3p-Ssy5p), wh 1344690 8198325 PAS_chr2-1_0707 Pichia pastoris GS115 Probable serine protease of the SPS plasma membrane amino acid sensor system (Ssy1p-Ptr3p-Ssy5p), wh XP_002491635.1 1342507 R 644223 CDS PAS_chr2-1_0708 254569052 8198326 1345449..1346309 1 NC_012964.1 Mitochondrial inner membrane protein 1346309 8198326 PAS_chr2-1_0708 Pichia pastoris GS115 Mitochondrial inner membrane protein XP_002491636.1 1345449 D 644223 CDS PAS_chr2-1_0709 254569054 8198327 complement(1346342..1350043) 1 NC_012964.1 Putative RNA helicase 1350043 8198327 PAS_chr2-1_0709 Pichia pastoris GS115 Putative RNA helicase XP_002491637.1 1346342 R 644223 CDS PAS_chr2-1_0880 254569056 8198328 complement(1350309..1351115) 1 NC_012964.1 hypothetical protein 1351115 8198328 PAS_chr2-1_0880 Pichia pastoris GS115 hypothetical protein XP_002491638.1 1350309 R 644223 CDS PAS_chr2-1_0710 254569058 8198949 complement(1351157..1353448) 1 NC_012964.1 ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex 1353448 8198949 PAS_chr2-1_0710 Pichia pastoris GS115 ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex XP_002491639.1 1351157 R 644223 CDS PAS_chr2-1_0711 254569060 8198329 1353625..1354404 1 NC_012964.1 hypothetical protein 1354404 8198329 PAS_chr2-1_0711 Pichia pastoris GS115 hypothetical protein XP_002491640.1 1353625 D 644223 CDS PAS_chr2-1_0712 254569062 8198330 1354554..1354853 1 NC_012964.1 Putative protein of unknown function 1354853 8198330 PAS_chr2-1_0712 Pichia pastoris GS115 Putative protein of unknown function XP_002491641.1 1354554 D 644223 CDS PAS_chr2-1_0713 254569064 8198331 1355103..1357040 1 NC_012964.1 Putative protein of unknown function 1357040 8198331 PAS_chr2-1_0713 Pichia pastoris GS115 Putative protein of unknown function XP_002491642.1 1355103 D 644223 CDS PAS_chr2-1_0714 254569066 8198332 complement(join(1357097..1357532,1357586..1357623)) 1 NC_012964.1 SUMO-conjugating enzyme involved in the Smt3p conjugation pathway 1357623 8198332 PAS_chr2-1_0714 Pichia pastoris GS115 SUMO-conjugating enzyme involved in the Smt3p conjugation pathway XP_002491643.1 1357097 R 644223 CDS PAS_chr2-1_0715 254569068 8198333 1357913..1358815 1 NC_012964.1 PEX19; peroxisomal biogenesis protein 1358815 8198333 PAS_chr2-1_0715 Pichia pastoris GS115 PEX19; peroxisomal biogenesis protein XP_002491644.1 1357913 D 644223 CDS PAS_chr2-1_0716 254569070 8198334 1359427..1361109 1 NC_012964.1 5-aminolevulinate synthase, catalyzes the first step in the heme biosynthetic pathway 1361109 8198334 PAS_chr2-1_0716 Pichia pastoris GS115 5-aminolevulinate synthase, catalyzes the first step in the heme biosynthetic pathway XP_002491645.1 1359427 D 644223 CDS PAS_chr2-1_0717 254569072 8198335 complement(join(1361182..1361409,1361502..1361510)) 1 NC_012964.1 hypothetical protein 1361510 8198335 PAS_chr2-1_0717 Pichia pastoris GS115 hypothetical protein XP_002491646.1 1361182 R 644223 CDS PAS_chr2-1_0718 254569074 8198336 1361966..1364257 1 NC_012964.1 Putative positive regulator of mannosylphosphate transferase (Mnn6p) 1364257 8198336 PAS_chr2-1_0718 Pichia pastoris GS115 Putative positive regulator of mannosylphosphate transferase (Mnn6p) XP_002491647.1 1361966 D 644223 CDS PAS_chr2-1_0719 254569076 8198337 1364583..1365965 1 NC_012964.1 Putative transporter, member of the SLC10 carrier family 1365965 8198337 PAS_chr2-1_0719 Pichia pastoris GS115 Putative transporter, member of the SLC10 carrier family XP_002491648.1 1364583 D 644223 CDS PAS_chr2-1_0720 254569078 8198338 complement(1366036..1367457) 1 NC_012964.1 Component of both the SWI/SNF and RSC chromatin remodeling complexes 1367457 8198338 PAS_chr2-1_0720 Pichia pastoris GS115 Component of both the SWI/SNF and RSC chromatin remodeling complexes XP_002491649.1 1366036 R 644223 CDS PAS_chr2-1_0721 254569080 8198339 1368047..1368565 1 NC_012964.1 Centromere protein that resembles histones, required for proper kinetochore function 1368565 8198339 PAS_chr2-1_0721 Pichia pastoris GS115 Centromere protein that resembles histones, required for proper kinetochore function XP_002491650.1 1368047 D 644223 CDS PAS_chr2-1_0722 254569082 8198340 complement(1368676..1371159) 1 NC_012964.1 Protein of unknown function with similarity to Ykl050cp and Uso1p 1371159 8198340 PAS_chr2-1_0722 Pichia pastoris GS115 Protein of unknown function with similarity to Ykl050cp and Uso1p XP_002491651.1 1368676 R 644223 CDS PAS_chr2-1_0723 254569084 8198341 1372100..1373170 1 NC_012964.1 Transcriptional activator related to Msn2p 1373170 8198341 PAS_chr2-1_0723 Pichia pastoris GS115 Transcriptional activator related to Msn2p XP_002491652.1 1372100 D 644223 CDS PAS_chr2-1_0724 254569086 8198342 complement(1373354..1373977) 1 NC_012964.1 hypothetical protein 1373977 8198342 PAS_chr2-1_0724 Pichia pastoris GS115 hypothetical protein XP_002491653.1 1373354 R 644223 CDS PAS_chr2-1_0725 254569088 8198343 1374127..1375257 1 NC_012964.1 Constituent of 66S pre-ribosomal particles, involved in 60S ribosomal subunit biogenesis 1375257 8198343 PAS_chr2-1_0725 Pichia pastoris GS115 Constituent of 66S pre-ribosomal particles, involved in 60S ribosomal subunit biogenesis XP_002491654.1 1374127 D 644223 CDS PAS_chr2-1_0726 254569090 8198344 complement(1375295..1377241) 1 NC_012964.1 hypothetical protein 1377241 8198344 PAS_chr2-1_0726 Pichia pastoris GS115 hypothetical protein XP_002491655.1 1375295 R 644223 CDS PAS_chr2-1_0727 254569092 8198345 1377406..1378809 1 NC_012964.1 UDP-N-acetyl-glucosamine-1-P transferase 1378809 8198345 PAS_chr2-1_0727 Pichia pastoris GS115 UDP-N-acetyl-glucosamine-1-P transferase XP_002491656.1 1377406 D 644223 CDS PAS_chr2-1_0728 254569094 8198346 complement(1379773..1380222) 1 NC_012964.1 Putative transporter, member of the sugar porter family 1380222 8198346 PAS_chr2-1_0728 Pichia pastoris GS115 Putative transporter, member of the sugar porter family XP_002491657.1 1379773 R 644223 CDS PAS_chr2-1_0881 254569096 8198347 complement(1380405..1381886) 1 NC_012964.1 hypothetical protein 1381886 8198347 PAS_chr2-1_0881 Pichia pastoris GS115 hypothetical protein XP_002491658.1 1380405 R 644223 CDS PAS_chr2-1_0729 254569098 8198950 1382131..1382772 1 NC_012964.1 hypothetical protein 1382772 8198950 PAS_chr2-1_0729 Pichia pastoris GS115 hypothetical protein XP_002491659.1 1382131 D 644223 CDS PAS_chr2-1_0730 254569100 8198348 complement(1382781..1383914) 1 NC_012964.1 Endoribonuclease 1383914 8198348 PAS_chr2-1_0730 Pichia pastoris GS115 Endoribonuclease XP_002491660.1 1382781 R 644223 CDS PAS_chr2-1_0731 254569102 8198349 complement(1384032..1385132) 1 NC_012964.1 Protein that binds tRNA and methionyl-and glutamyl-tRNA synthetases (Mes1p and Gus1p) 1385132 8198349 PAS_chr2-1_0731 Pichia pastoris GS115 Protein that binds tRNA and methionyl-and glutamyl-tRNA synthetases (Mes1p and Gus1p) XP_002491661.1 1384032 R 644223 CDS PAS_chr2-1_0732 254569104 8198350 1385346..1386791 1 NC_012964.1 Putative protein of unknown function 1386791 8198350 PAS_chr2-1_0732 Pichia pastoris GS115 Putative protein of unknown function XP_002491662.1 1385346 D 644223 CDS PAS_chr2-1_0733 254569106 8198351 complement(join(1386809..1387243,1387308..1387310)) 1 NC_012964.1 Essential light chain for Myo1p, light chain for Myo2p 1387310 8198351 PAS_chr2-1_0733 Pichia pastoris GS115 Essential light chain for Myo1p, light chain for Myo2p XP_002491663.1 1386809 R 644223 CDS PAS_chr2-1_0734 254569108 8198352 join(1387498..1387806,1387817..1388545) 1 NC_012964.1 Putative protein of unknown function 1388545 8198352 PAS_chr2-1_0734 Pichia pastoris GS115 Putative protein of unknown function XP_002491664.1 1387498 D 644223 CDS PAS_chr2-1_0735 254569110 8198353 complement(1388662..1389195) 1 NC_012964.1 hypothetical protein 1389195 8198353 PAS_chr2-1_0735 Pichia pastoris GS115 hypothetical protein XP_002491665.1 1388662 R 644223 CDS PAS_chr2-1_0736 254569112 8198354 1389349..1390392 1 NC_012964.1 GTP cyclohydrolase II 1390392 8198354 PAS_chr2-1_0736 Pichia pastoris GS115 GTP cyclohydrolase II XP_002491666.1 1389349 D 644223 CDS PAS_chr2-1_0737 254569114 8198355 complement(1390699..1392369) 1 NC_012964.1 hypothetical protein 1392369 8198355 PAS_chr2-1_0737 Pichia pastoris GS115 hypothetical protein XP_002491667.1 1390699 R 644223 CDS PAS_chr2-1_0738 254569116 8198356 complement(join(1392538..1393031,1393109..1393463)) 1 NC_012964.1 hypothetical protein 1393463 8198356 PAS_chr2-1_0738 Pichia pastoris GS115 hypothetical protein XP_002491668.1 1392538 R 644223 CDS PAS_chr2-1_0739 254569118 8198357 1393641..1396730 1 NC_012964.1 Regulatory subunit of trehalose-6-phosphate synthase/phosphatase complex 1396730 8198357 PAS_chr2-1_0739 Pichia pastoris GS115 Regulatory subunit of trehalose-6-phosphate synthase/phosphatase complex XP_002491669.1 1393641 D 644223 CDS PAS_chr2-1_0740 254569120 8198358 complement(1396761..1397585) 1 NC_012964.1 hypothetical protein 1397585 8198358 PAS_chr2-1_0740 Pichia pastoris GS115 hypothetical protein XP_002491670.1 1396761 R 644223 CDS PAS_chr2-1_0741 254569122 8198359 1397749..1398201 1 NC_012964.1 Translation initiation factor eIF1A 1398201 8198359 PAS_chr2-1_0741 Pichia pastoris GS115 Translation initiation factor eIF1A XP_002491671.1 1397749 D 644223 CDS PAS_chr2-1_0742 254569124 8198360 complement(1398270..1399352) 1 NC_012964.1 hypothetical protein 1399352 8198360 PAS_chr2-1_0742 Pichia pastoris GS115 hypothetical protein XP_002491672.1 1398270 R 644223 CDS PAS_chr2-1_0743 254569126 8198361 1399500..1403900 1 NC_012964.1 Putative protein of unknown function 1403900 8198361 PAS_chr2-1_0743 Pichia pastoris GS115 Putative protein of unknown function XP_002491673.1 1399500 D 644223 CDS PAS_chr2-1_0744 254569128 8198362 complement(1403897..1416346) 1 NC_012964.1 Cytoplasmic heavy chain dynein, microtubule motor protein, required for anaphase spindle elongation 1416346 8198362 PAS_chr2-1_0744 Pichia pastoris GS115 Cytoplasmic heavy chain dynein, microtubule motor protein, required for anaphase spindle elongation XP_002491674.1 1403897 R 644223 CDS PAS_chr2-1_0745 254569130 8198363 complement(1416498..1418252) 1 NC_012964.1 Protein of unknown function with similarity to F-box proteins 1418252 8198363 PAS_chr2-1_0745 Pichia pastoris GS115 Protein of unknown function with similarity to F-box proteins XP_002491675.1 1416498 R 644223 CDS PAS_chr2-1_0882 254569132 8198364 complement(1418383..1419339) 1 NC_012964.1 hypothetical protein 1419339 8198364 PAS_chr2-1_0882 Pichia pastoris GS115 hypothetical protein XP_002491676.1 1418383 R 644223 CDS PAS_chr2-1_0746 254569134 8198951 complement(1419747..1419935) 1 NC_012964.1 hypothetical protein 1419935 8198951 PAS_chr2-1_0746 Pichia pastoris GS115 hypothetical protein XP_002491677.1 1419747 R 644223 CDS PAS_chr2-1_0747 254569136 8198365 complement(1420876..1422996) 1 NC_012964.1 hypothetical protein 1422996 8198365 PAS_chr2-1_0747 Pichia pastoris GS115 hypothetical protein XP_002491678.1 1420876 R 644223 CDS PAS_chr2-1_0748 254569138 8198366 1423433..1424641 1 NC_012964.1 hypothetical protein 1424641 8198366 PAS_chr2-1_0748 Pichia pastoris GS115 hypothetical protein XP_002491679.1 1423433 D 644223 CDS PAS_chr2-1_0749 254569140 8198367 complement(1424753..1425766) 1 NC_012964.1 Allantoicase, converts allantoate to urea and ureidoglycolate 1425766 8198367 PAS_chr2-1_0749 Pichia pastoris GS115 Allantoicase, converts allantoate to urea and ureidoglycolate XP_002491680.1 1424753 R 644223 CDS PAS_chr2-1_0750 254569142 8198368 complement(1425989..1427032) 1 NC_012964.1 Putative protein of unknown function 1427032 8198368 PAS_chr2-1_0750 Pichia pastoris GS115 Putative protein of unknown function XP_002491681.1 1425989 R 644223 CDS PAS_chr2-1_0751 254569144 8198369 1427323..1427517 1 NC_012964.1 Subunit of the mitochondrial F1F0 ATP synthase 1427517 8198369 PAS_chr2-1_0751 Pichia pastoris GS115 Subunit of the mitochondrial F1F0 ATP synthase XP_002491682.1 1427323 D 644223 CDS PAS_chr2-1_0752 254569146 8198370 complement(1427634..1429403) 1 NC_012964.1 Cystathionine gamma-synthase, converts cysteine into cystathionine 1429403 8198370 PAS_chr2-1_0752 Pichia pastoris GS115 Cystathionine gamma-synthase, converts cysteine into cystathionine XP_002491683.1 1427634 R 644223 CDS PAS_chr2-1_0753 254569148 8198371 1429843..1431447 1 NC_012964.1 Alpha-1,2-mannosidase involved in ER quality control 1431447 8198371 PAS_chr2-1_0753 Pichia pastoris GS115 Alpha-1,2-mannosidase involved in ER quality control XP_002491684.1 1429843 D 644223 CDS PAS_chr2-1_0883 254569150 8198372 complement(1431860..1432570) 1 NC_012964.1 hypothetical protein 1432570 8198372 PAS_chr2-1_0883 Pichia pastoris GS115 hypothetical protein XP_002491685.1 1431860 R 644223 CDS PAS_chr2-1_0754 254569152 8198952 complement(1433022..1433495) 1 NC_012964.1 hypothetical protein 1433495 8198952 PAS_chr2-1_0754 Pichia pastoris GS115 hypothetical protein XP_002491686.1 1433022 R 644223 CDS PAS_chr2-1_0884 254569154 8198373 1433698..1434555 1 NC_012964.1 hypothetical protein 1434555 8198373 PAS_chr2-1_0884 Pichia pastoris GS115 hypothetical protein XP_002491687.1 1433698 D 644223 CDS PAS_chr2-1_0755 254569156 8198953 complement(1434582..1435190) 1 NC_012964.1 Alpha subunit of the heteromeric nascent polypeptide-associated complex (NAC) 1435190 8198953 PAS_chr2-1_0755 Pichia pastoris GS115 Alpha subunit of the heteromeric nascent polypeptide-associated complex (NAC) XP_002491688.1 1434582 R 644223 CDS PAS_chr2-1_0756 254569158 8198374 1435535..1439866 1 NC_012964.1 Aminophospholipid translocase (flippase) that localizes primarily to the plasma membrane 1439866 8198374 PAS_chr2-1_0756 Pichia pastoris GS115 Aminophospholipid translocase (flippase) that localizes primarily to the plasma membrane XP_002491689.1 1435535 D 644223 CDS PAS_chr2-1_0757 254569160 8198375 complement(1440711..1443821) 1 NC_012964.1 Zinc cluster transcriptional activator 1443821 8198375 PAS_chr2-1_0757 Pichia pastoris GS115 Zinc cluster transcriptional activator XP_002491690.1 1440711 R 644223 CDS PAS_chr2-1_0758 254569162 8198376 complement(join(1444399..1444845,1444896..1444898)) 1 NC_012964.1 Calmodulin 1444898 8198376 PAS_chr2-1_0758 Pichia pastoris GS115 Calmodulin XP_002491691.1 1444399 R 644223 CDS PAS_chr2-1_0759 254569164 8198377 1445027..1446379 1 NC_012964.1 Mannosyltransferase, involved in asparagine-linked glycosylation in the endoplasmic reticulum (ER) 1446379 8198377 PAS_chr2-1_0759 Pichia pastoris GS115 Mannosyltransferase, involved in asparagine-linked glycosylation in the endoplasmic reticulum (ER) XP_002491692.1 1445027 D 644223 CDS PAS_chr2-1_0885 254569166 8198378 complement(1446867..1447748) 1 NC_012964.1 hypothetical protein 1447748 8198378 PAS_chr2-1_0885 Pichia pastoris GS115 hypothetical protein XP_002491693.1 1446867 R 644223 CDS PAS_chr2-1_0760 254569168 8198954 complement(1447940..1448647) 1 NC_012964.1 Spermidine synthase, involved in biosynthesis of spermidine and also in biosynthesis of pantothenic 1448647 8198954 PAS_chr2-1_0760 Pichia pastoris GS115 Spermidine synthase, involved in biosynthesis of spermidine and also in biosynthesis of pantothenic XP_002491694.1 1447940 R 644223 CDS PAS_chr2-1_0761 254569170 8198379 1448864..1449154 1 NC_012964.1 Protein involved in mRNA export coupled transcription activation 1449154 8198379 PAS_chr2-1_0761 Pichia pastoris GS115 Protein involved in mRNA export coupled transcription activation XP_002491695.1 1448864 D 644223 CDS PAS_chr2-1_0762 254569172 8198380 complement(1449255..1451678) 1 NC_012964.1 General transcriptional co-repressor, acts together with Tup1p 1451678 8198380 PAS_chr2-1_0762 Pichia pastoris GS115 General transcriptional co-repressor, acts together with Tup1p XP_002491696.1 1449255 R 644223 CDS PAS_chr2-1_0886 254569174 8198381 complement(1452296..1453951) 1 NC_012964.1 hypothetical protein 1453951 8198381 PAS_chr2-1_0886 Pichia pastoris GS115 hypothetical protein XP_002491697.1 1452296 R 644223 CDS PAS_chr2-1_0763 254569176 8198955 complement(1454131..1455015) 1 NC_012964.1 2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase 1455015 8198955 PAS_chr2-1_0763 Pichia pastoris GS115 2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase XP_002491698.1 1454131 R 644223 CDS PAS_chr2-1_0764 254569178 8198382 1455597..1456718 1 NC_012964.1 hypothetical protein 1456718 8198382 PAS_chr2-1_0764 Pichia pastoris GS115 hypothetical protein XP_002491699.1 1455597 D 644223 CDS PAS_chr2-1_0765 254569180 8198383 complement(1456942..1459140) 1 NC_012964.1 Putative FAD transporter 1459140 8198383 PAS_chr2-1_0765 Pichia pastoris GS115 Putative FAD transporter XP_002491700.1 1456942 R 644223 CDS PAS_chr2-1_0767 254569182 8198044 1460130..1462136 1 NC_012964.1 Acetyl-coA synthetase isoform 1462136 8198044 PAS_chr2-1_0767 Pichia pastoris GS115 Acetyl-coA synthetase isoform XP_002491701.1 1460130 D 644223 CDS PAS_chr2-1_0768 254569184 8198045 1462448..1465324 1 NC_012964.1 Deoxycytidyl transferase, forms a complex with the subunits of DNA polymerase zeta, Rev3p and Rev7p 1465324 8198045 PAS_chr2-1_0768 Pichia pastoris GS115 Deoxycytidyl transferase, forms a complex with the subunits of DNA polymerase zeta, Rev3p and Rev7p XP_002491702.1 1462448 D 644223 CDS PAS_chr2-1_0769 254569186 8198046 complement(1465321..1466838) 1 NC_012964.1 Pyruvate kinase 1466838 8198046 PAS_chr2-1_0769 Pichia pastoris GS115 Pyruvate kinase XP_002491703.1 1465321 R 644223 CDS PAS_chr2-1_0770 254569188 8198047 complement(1467184..1468638) 1 NC_012964.1 Uridine/cytidine kinase, component of the pyrimidine ribonucleotide salvage pathway 1468638 8198047 PAS_chr2-1_0770 Pichia pastoris GS115 Uridine/cytidine kinase, component of the pyrimidine ribonucleotide salvage pathway XP_002491704.1 1467184 R 644223 CDS PAS_chr2-1_0887 254569190 8198048 complement(join(1469608..1470131,1470175..1470526)) 1 NC_012964.1 hypothetical protein 1470526 8198048 PAS_chr2-1_0887 Pichia pastoris GS115 hypothetical protein XP_002491705.1 1469608 R 644223 CDS PAS_chr2-1_0771 254569192 8198956 1471227..1473020 1 NC_012964.1 Phosphoglucomutase, catalyzes interconversion of glucose-1-phosphate and glucose-6-phospate 1473020 8198956 PAS_chr2-1_0771 Pichia pastoris GS115 Phosphoglucomutase, catalyzes interconversion of glucose-1-phosphate and glucose-6-phospate XP_002491706.1 1471227 D 644223 CDS PAS_chr2-1_0772 254569194 8198049 1473158..1474531 1 NC_012964.1 Component of the mannan polymerase I 1474531 8198049 PAS_chr2-1_0772 Pichia pastoris GS115 Component of the mannan polymerase I XP_002491707.1 1473158 D 644223 CDS PAS_chr2-1_0773 254569196 8198050 complement(1474629..1476491) 1 NC_012964.1 Protein with a role in cellular adhesion and filamentous growth 1476491 8198050 PAS_chr2-1_0773 Pichia pastoris GS115 Protein with a role in cellular adhesion and filamentous growth XP_002491708.1 1474629 R 644223 CDS PAS_chr2-1_0774 254569198 8198051 complement(1476728..1478551) 1 NC_012964.1 Subunit of TRAPP (transport protein particle) 1478551 8198051 PAS_chr2-1_0774 Pichia pastoris GS115 Subunit of TRAPP (transport protein particle) XP_002491709.1 1476728 R 644223 CDS PAS_chr2-1_0775 254569200 8198052 1479115..1480191 1 NC_012964.1 NAD-dependent arabinose dehydrogenase, involved in biosynthesis of erythroascorbic acid 1480191 8198052 PAS_chr2-1_0775 Pichia pastoris GS115 NAD-dependent arabinose dehydrogenase, involved in biosynthesis of erythroascorbic acid XP_002491710.1 1479115 D 644223 CDS PAS_chr2-1_0776 254569202 8198053 complement(1480257..1482965) 1 NC_012964.1 Multifunctional enzyme of the peroxisomal fatty acid beta-oxidation pathway 1482965 8198053 PAS_chr2-1_0776 Pichia pastoris GS115 Multifunctional enzyme of the peroxisomal fatty acid beta-oxidation pathway XP_002491711.1 1480257 R 644223 CDS PAS_chr2-1_0888 254569204 8198054 1483231..1484082 1 NC_012964.1 hypothetical protein 1484082 8198054 PAS_chr2-1_0888 Pichia pastoris GS115 hypothetical protein XP_002491712.1 1483231 D 644223 CDS PAS_chr2-1_0777 254569206 8198957 complement(1484112..1485188) 1 NC_012964.1 Mitochondrial tRNA pseudouridine synthase involved in pseudouridylation of mitochondrial tRNAs 1485188 8198957 PAS_chr2-1_0777 Pichia pastoris GS115 Mitochondrial tRNA pseudouridine synthase involved in pseudouridylation of mitochondrial tRNAs XP_002491713.1 1484112 R 644223 CDS PAS_chr2-1_0778 254569208 8198055 1485289..1487994 1 NC_012964.1 Glucosidase II catalytic subunit required for normal cell wall synthesis 1487994 8198055 PAS_chr2-1_0778 Pichia pastoris GS115 Glucosidase II catalytic subunit required for normal cell wall synthesis XP_002491714.1 1485289 D 644223 CDS PAS_chr2-1_0889 254569210 8198056 complement(1488043..1488489) 1 NC_012964.1 hypothetical protein 1488489 8198056 PAS_chr2-1_0889 Pichia pastoris GS115 hypothetical protein XP_002491715.1 1488043 R 644223 CDS PAS_chr2-1_0779 254569212 8198958 complement(join(1489197..1489604,1489834..1489836)) 1 NC_012964.1 Ribosomal protein 51 (rp51) of the small (40s) subunit 1489836 8198958 PAS_chr2-1_0779 Pichia pastoris GS115 Ribosomal protein 51 (rp51) of the small (40s) subunit XP_002491716.1 1489197 R 644223 CDS PAS_chr2-1_0780 254569214 8198057 1490114..1491451 1 NC_012964.1 Transcription coactivator, component of the ADA and SAGA transcriptional adaptor/HAT complexes 1491451 8198057 PAS_chr2-1_0780 Pichia pastoris GS115 Transcription coactivator, component of the ADA and SAGA transcriptional adaptor/HAT complexes XP_002491717.1 1490114 D 644223 CDS PAS_chr2-1_0781 254569216 8198058 complement(1492548..1493798) 1 NC_012964.1 Nucleolar protein, component of the small subunit (SSU) processome 1493798 8198058 PAS_chr2-1_0781 Pichia pastoris GS115 Nucleolar protein, component of the small subunit (SSU) processome XP_002491718.1 1492548 R 644223 CDS PAS_chr2-1_0782 254569218 8198059 1494551..1495777 1 NC_012964.1 Putative protein of unknown function 1495777 8198059 PAS_chr2-1_0782 Pichia pastoris GS115 Putative protein of unknown function XP_002491719.1 1494551 D 644223 CDS PAS_chr2-1_0890 254569220 8198060 1495989..1496774 1 NC_012964.1 hypothetical protein 1496774 8198060 PAS_chr2-1_0890 Pichia pastoris GS115 hypothetical protein XP_002491720.1 1495989 D 644223 CDS PAS_chr2-1_0783 254569222 8198959 1497102..1497563 1 NC_012964.1 Protein component of the small (40S) ribosomal subunit 1497563 8198959 PAS_chr2-1_0783 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002491721.1 1497102 D 644223 CDS PAS_chr2-1_0784 254569224 8198061 complement(1497674..1498903) 1 NC_012964.1 Homeodomain-containing transcriptional repressor 1498903 8198061 PAS_chr2-1_0784 Pichia pastoris GS115 Homeodomain-containing transcriptional repressor XP_002491722.1 1497674 R 644223 CDS PAS_chr2-1_0785 254569226 8198062 1500046..1502151 1 NC_012964.1 Long chain fatty acyl-CoA synthetase with a preference for C12:0-C16:0 fatty acids 1502151 8198062 PAS_chr2-1_0785 Pichia pastoris GS115 Long chain fatty acyl-CoA synthetase with a preference for C12:0-C16:0 fatty acids XP_002491723.1 1500046 D 644223 CDS PAS_chr2-1_0786 254569228 8198063 complement(1502326..1503489) 1 NC_012964.1 Putative protein of unknown function 1503489 8198063 PAS_chr2-1_0786 Pichia pastoris GS115 Putative protein of unknown function XP_002491724.1 1502326 R 644223 CDS PAS_chr2-1_0787 254569230 8198064 1505101..1506990 1 NC_012964.1 Ferro-O2-oxidoreductase 1506990 8198064 PAS_chr2-1_0787 Pichia pastoris GS115 Ferro-O2-oxidoreductase XP_002491725.1 1505101 D 644223 CDS PAS_chr2-1_0788 254569232 8198065 1507516..1508892 1 NC_012964.1 Mu3-like subunit of the clathrin associated protein complex (AP-3) 1508892 8198065 PAS_chr2-1_0788 Pichia pastoris GS115 Mu3-like subunit of the clathrin associated protein complex (AP-3) XP_002491726.1 1507516 D 644223 CDS PAS_chr2-1_0789 254569234 8198066 join(1509745..1510086,1510148..1511419) 1 NC_012964.1 Subunit of the membrane-associated retromer complex essential for endosome-to-Golgi retrograde prote 1511419 8198066 PAS_chr2-1_0789 Pichia pastoris GS115 Subunit of the membrane-associated retromer complex essential for endosome-to-Golgi retrograde prote XP_002491727.1 1509745 D 644223 CDS PAS_chr2-1_0790 254569236 8198067 1512196..1512501 1 NC_012964.1 hypothetical protein 1512501 8198067 PAS_chr2-1_0790 Pichia pastoris GS115 hypothetical protein XP_002491728.1 1512196 D 644223 CDS PAS_chr2-1_0791 254569238 8198068 1512698..1513351 1 NC_012964.1 hypothetical protein 1513351 8198068 PAS_chr2-1_0791 Pichia pastoris GS115 hypothetical protein XP_002491729.1 1512698 D 644223 CDS PAS_chr2-1_0792 254569240 8198069 complement(1513408..1514466) 1 NC_012964.1 hypothetical protein 1514466 8198069 PAS_chr2-1_0792 Pichia pastoris GS115 hypothetical protein XP_002491730.1 1513408 R 644223 CDS PAS_chr2-1_0793 254569242 8198070 1514851..1516350 1 NC_012964.1 Vacuolar membrane protein of unknown function that is conserved in mammals 1516350 8198070 PAS_chr2-1_0793 Pichia pastoris GS115 Vacuolar membrane protein of unknown function that is conserved in mammals XP_002491731.1 1514851 D 644223 CDS PAS_chr2-1_0794 254569244 8198071 1516825..1517841 1 NC_012964.1 Protein with lipolytic activity towards triacylglycerols and diacylglycerols when expressed in E. co 1517841 8198071 PAS_chr2-1_0794 Pichia pastoris GS115 Protein with lipolytic activity towards triacylglycerols and diacylglycerols when expressed in E. co XP_002491732.1 1516825 D 644223 CDS PAS_chr2-1_0795 254569246 8198072 complement(1517836..1521246) 1 NC_012964.1 Protein that activates transcription through interaction with DNA-bound Snf 1521246 8198072 PAS_chr2-1_0795 Pichia pastoris GS115 Protein that activates transcription through interaction with DNA-bound Snf XP_002491733.1 1517836 R 644223 CDS PAS_chr2-1_0891 254569248 8198073 complement(1521542..1522351) 1 NC_012964.1 hypothetical protein 1522351 8198073 PAS_chr2-1_0891 Pichia pastoris GS115 hypothetical protein XP_002491734.1 1521542 R 644223 CDS PAS_chr2-1_0796 254569250 8198960 complement(1522542..1523747) 1 NC_012964.1 Protein localized to COPII-coated vesicles, forms a complex with Erv41p 1523747 8198960 PAS_chr2-1_0796 Pichia pastoris GS115 Protein localized to COPII-coated vesicles, forms a complex with Erv41p XP_002491735.1 1522542 R 644223 CDS PAS_chr2-1_0797 254569252 8198074 complement(1523871..1526192) 1 NC_012964.1 5' to 3' DNA helicase, involved in nucleotide excision repair and transcription 1526192 8198074 PAS_chr2-1_0797 Pichia pastoris GS115 5' to 3' DNA helicase, involved in nucleotide excision repair and transcription XP_002491736.1 1523871 R 644223 CDS PAS_chr2-1_0798 254569254 8198075 complement(1527033..1528082) 1 NC_012964.1 Putative protein of unknown function 1528082 8198075 PAS_chr2-1_0798 Pichia pastoris GS115 Putative protein of unknown function XP_002491737.1 1527033 R 644223 CDS PAS_chr2-1_0799 254569256 8198076 join(1528158..1528169,1528473..1533183,1533234..1533625) 1 NC_012964.1 Subunit of the HIR complex, a nucleosome assembly complex 1533625 8198076 PAS_chr2-1_0799 Pichia pastoris GS115 Subunit of the HIR complex, a nucleosome assembly complex XP_002491738.1 1528158 D 644223 CDS PAS_chr2-1_0800 254569258 8198077 complement(1533995..1536931) 1 NC_012964.1 Subunit of the RNA polymerase II mediator complex 1536931 8198077 PAS_chr2-1_0800 Pichia pastoris GS115 Subunit of the RNA polymerase II mediator complex XP_002491739.1 1533995 R 644223 CDS PAS_chr2-1_0801 254569260 8198078 1537320..1538600 1 NC_012964.1 Serine/threonine protein kinase that inhibits pheromone induced signalling downstream of MAPK 1538600 8198078 PAS_chr2-1_0801 Pichia pastoris GS115 Serine/threonine protein kinase that inhibits pheromone induced signalling downstream of MAPK XP_002491740.1 1537320 D 644223 CDS PAS_chr2-1_0802 254569262 8198079 1538801..1540555 1 NC_012964.1 Putative protein of unknown function 1540555 8198079 PAS_chr2-1_0802 Pichia pastoris GS115 Putative protein of unknown function XP_002491741.1 1538801 D 644223 CDS PAS_chr2-1_0803 254569264 8198080 complement(1540758..1541312) 1 NC_012964.1 Protein of unknown function, contains a J-domain 1541312 8198080 PAS_chr2-1_0803 Pichia pastoris GS115 Protein of unknown function, contains a J-domain XP_002491742.1 1540758 R 644223 CDS PAS_chr2-2_0446 254569266 8198081 1551723..1552430 1 NC_012964.1 Protein with sequence similarity to 2,3-diketo-5-methylthiopentyl-1-phosphate enolase-phosphatases 1552430 8198081 PAS_chr2-2_0446 Pichia pastoris GS115 Protein with sequence similarity to 2,3-diketo-5-methylthiopentyl-1-phosphate enolase-phosphatases XP_002491743.1 1551723 D 644223 CDS PAS_chr2-2_0445 254569268 8198252 complement(join(1552582..1553532,1553588..1553653)) 1 NC_012964.1 Protein with ubiquitin-like N terminus, recognizes and binds damaged DNA (with Rad4p) 1553653 8198252 PAS_chr2-2_0445 Pichia pastoris GS115 Protein with ubiquitin-like N terminus, recognizes and binds damaged DNA (with Rad4p) XP_002491744.1 1552582 R 644223 CDS PAS_chr2-2_0444 254569270 8198446 1553988..1555829 1 NC_012964.1 U1 snRNP protein involved in splicing, contains multiple tetriatricopeptide repeats 1555829 8198446 PAS_chr2-2_0444 Pichia pastoris GS115 U1 snRNP protein involved in splicing, contains multiple tetriatricopeptide repeats XP_002491745.1 1553988 D 644223 CDS PAS_chr2-2_0443 254569272 8198697 complement(1555860..1557530) 1 NC_012964.1 Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad16p) 1557530 8198697 PAS_chr2-2_0443 Pichia pastoris GS115 Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad16p) XP_002491746.1 1555860 R 644223 CDS PAS_chr2-2_0442 254569274 8198696 complement(1559124..1560356) 1 NC_012964.1 hypothetical protein 1560356 8198696 PAS_chr2-2_0442 Pichia pastoris GS115 hypothetical protein XP_002491747.1 1559124 R 644223 CDS PAS_chr2-2_0441 254569276 8198695 1560513..1561493 1 NC_012964.1 Gluconolactonase putatively involved in growth regulation 1561493 8198695 PAS_chr2-2_0441 Pichia pastoris GS115 Gluconolactonase putatively involved in growth regulation XP_002491748.1 1560513 D 644223 CDS PAS_chr2-2_0440 254569278 8199143 complement(join(1561473..1561821,1561868..1561932)) 1 NC_012964.1 Protein of unknown function, required for growth at high temperature 1561932 8199143 PAS_chr2-2_0440 Pichia pastoris GS115 Protein of unknown function, required for growth at high temperature XP_002491749.1 1561473 R 644223 CDS PAS_chr2-2_0439 254569280 8199142 complement(1562021..1562869) 1 NC_012964.1 Putative protein of unknown function 1562869 8199142 PAS_chr2-2_0439 Pichia pastoris GS115 Putative protein of unknown function XP_002491750.1 1562021 R 644223 CDS PAS_chr2-2_0438 254569282 8199141 1563183..1564022 1 NC_012964.1 hypothetical protein 1564022 8199141 PAS_chr2-2_0438 Pichia pastoris GS115 hypothetical protein XP_002491751.1 1563183 D 644223 CDS PAS_chr2-2_0437 254569284 8199140 1564268..1568845 1 NC_012964.1 Glycogen debranching enzyme containing glucanotranferase and alpha-1,6-amyloglucosidase activities 1568845 8199140 PAS_chr2-2_0437 Pichia pastoris GS115 Glycogen debranching enzyme containing glucanotranferase and alpha-1,6-amyloglucosidase activities XP_002491752.1 1564268 D 644223 CDS PAS_chr2-2_0436 254569286 8199139 complement(1568863..1573071) 1 NC_012964.1 Involved in exosome mediated 3' to 5' mRNA degradation & translation inhibition of non-poly(A) mRNAs 1573071 8199139 PAS_chr2-2_0436 Pichia pastoris GS115 Involved in exosome mediated 3' to 5' mRNA degradation & translation inhibition of non-poly(A) mRNAs XP_002491753.1 1568863 R 644223 CDS PAS_chr2-2_0435 254569288 8199138 1573337..1573804 1 NC_012964.1 hypothetical protein 1573804 8199138 PAS_chr2-2_0435 Pichia pastoris GS115 hypothetical protein XP_002491754.1 1573337 D 644223 CDS PAS_chr2-2_0434 254569290 8199137 complement(1573940..1574407) 1 NC_012964.1 RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III 1574407 8199137 PAS_chr2-2_0434 Pichia pastoris GS115 RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III XP_002491755.1 1573940 R 644223 CDS PAS_chr2-2_0433 254569292 8199136 1574624..1575703 1 NC_012964.1 Transcription factor IIIA (TFIIIA), essential protein with nine C2H2 Zn-fingers 1575703 8199136 PAS_chr2-2_0433 Pichia pastoris GS115 Transcription factor IIIA (TFIIIA), essential protein with nine C2H2 Zn-fingers XP_002491756.1 1574624 D 644223 CDS PAS_chr2-2_0432 254569294 8199135 complement(1575913..1577742) 1 NC_012964.1 Regulatory subunit of the Atg1p signaling complex 1577742 8199135 PAS_chr2-2_0432 Pichia pastoris GS115 Regulatory subunit of the Atg1p signaling complex XP_002491757.1 1575913 R 644223 CDS PAS_chr2-2_0431 254569296 8199134 complement(1577884..1579773) 1 NC_012964.1 RNA polymerase III subunit C82 1579773 8199134 PAS_chr2-2_0431 Pichia pastoris GS115 RNA polymerase III subunit C82 XP_002491758.1 1577884 R 644223 CDS PAS_chr2-2_0430 254569298 8199133 1579925..1580983 1 NC_012964.1 Subunit 2 of the ubiquinol cytochrome-c reductase complex 1580983 8199133 PAS_chr2-2_0430 Pichia pastoris GS115 Subunit 2 of the ubiquinol cytochrome-c reductase complex XP_002491759.1 1579925 D 644223 CDS PAS_chr2-2_0429 254569300 8199132 1581230..1581502 1 NC_012964.1 Core Sm protein Sm F 1581502 8199132 PAS_chr2-2_0429 Pichia pastoris GS115 Core Sm protein Sm F XP_002491760.1 1581230 D 644223 CDS PAS_chr2-2_0428 254569302 8199131 1581923..1582651 1 NC_012964.1 hypothetical protein 1582651 8199131 PAS_chr2-2_0428 Pichia pastoris GS115 hypothetical protein XP_002491761.1 1581923 D 644223 CDS PAS_chr2-2_0427 254569304 8199130 1582809..1583972 1 NC_012964.1 GPI transamidase subunit 1583972 8199130 PAS_chr2-2_0427 Pichia pastoris GS115 GPI transamidase subunit XP_002491762.1 1582809 D 644223 CDS PAS_chr2-2_0426 254569306 8199129 complement(1584727..1586724) 1 NC_012964.1 Subunit of a possibly tetrameric trichostatin A-sensitive class II histone deacetylase complex 1586724 8199129 PAS_chr2-2_0426 Pichia pastoris GS115 Subunit of a possibly tetrameric trichostatin A-sensitive class II histone deacetylase complex XP_002491763.1 1584727 R 644223 CDS PAS_chr2-2_0425 254569308 8199128 join(1587097..1587115,1587181..1588202) 1 NC_012964.1 Nuclear protein that acts as a heterodimer with Uba2p to activate Smt3p (SUMO) 1588202 8199128 PAS_chr2-2_0425 Pichia pastoris GS115 Nuclear protein that acts as a heterodimer with Uba2p to activate Smt3p (SUMO) XP_002491764.1 1587097 D 644223 CDS PAS_chr2-2_0424 254569310 8199127 complement(1588199..1589473) 1 NC_012964.1 Splicing factor, component of the U4/U6-U5 snRNP complex 1589473 8199127 PAS_chr2-2_0424 Pichia pastoris GS115 Splicing factor, component of the U4/U6-U5 snRNP complex XP_002491765.1 1588199 R 644223 CDS PAS_chr2-2_0423 254569312 8199126 1590486..1594505 1 NC_012964.1 Putative protein of unknown function 1594505 8199126 PAS_chr2-2_0423 Pichia pastoris GS115 Putative protein of unknown function XP_002491766.1 1590486 D 644223 CDS PAS_chr2-2_0422 254569314 8199125 1594876..1595625 1 NC_012964.1 hypothetical protein 1595625 8199125 PAS_chr2-2_0422 Pichia pastoris GS115 hypothetical protein XP_002491767.1 1594876 D 644223 CDS PAS_chr2-2_0498 254569316 8199124 1596039..1598213 1 NC_012964.1 hypothetical protein 1598213 8199124 PAS_chr2-2_0498 Pichia pastoris GS115 hypothetical protein XP_002491768.1 1596039 D 644223 CDS PAS_chr2-2_0420 254569318 8198300 complement(1599987..1602101) 1 NC_012964.1 Vacuolar membrane protein involved in vacuolar polyphosphate accumulation 1602101 8198300 PAS_chr2-2_0420 Pichia pastoris GS115 Vacuolar membrane protein involved in vacuolar polyphosphate accumulation XP_002491769.1 1599987 R 644223 CDS PAS_chr2-2_0419 254569320 8199123 complement(1602376..1603956) 1 NC_012964.1 Putative protein of unknown function 1603956 8199123 PAS_chr2-2_0419 Pichia pastoris GS115 Putative protein of unknown function XP_002491770.1 1602376 R 644223 CDS PAS_chr2-2_0417 254569322 8199122 complement(1605710..1606552) 1 NC_012964.1 Mitochondrial ribosomal protein of the large subunit 1606552 8199122 PAS_chr2-2_0417 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002491771.1 1605710 R 644223 CDS PAS_chr2-2_0416 254569324 8199121 join(1607751..1610463,1610503..1612076) 1 NC_012964.1 Subunit of the condensin complex, which reorganizes chromosomes during cell division 1612076 8199121 PAS_chr2-2_0416 Pichia pastoris GS115 Subunit of the condensin complex, which reorganizes chromosomes during cell division XP_002491772.1 1607751 D 644223 CDS PAS_chr2-2_0415 254569326 8199120 complement(1612136..1614865) 1 NC_012964.1 Beta3-like subunit of the yeast AP-3 complex 1614865 8199120 PAS_chr2-2_0415 Pichia pastoris GS115 Beta3-like subunit of the yeast AP-3 complex XP_002491773.1 1612136 R 644223 CDS PAS_chr2-2_0414 254569328 8199119 complement(join(1615026..1618408,1618510..1618696)) 1 NC_012964.1 Protein with a role in maintenance of cellular integrity 1618696 8199119 PAS_chr2-2_0414 Pichia pastoris GS115 Protein with a role in maintenance of cellular integrity XP_002491774.1 1615026 R 644223 CDS PAS_chr2-2_0413 254569330 8199118 complement(1619531..1619944) 1 NC_012964.1 J-protein co-chaperone of the mitochondrial import motor 1619944 8199118 PAS_chr2-2_0413 Pichia pastoris GS115 J-protein co-chaperone of the mitochondrial import motor XP_002491775.1 1619531 R 644223 CDS PAS_chr2-2_0412 254569332 8199117 1620354..1620953 1 NC_012964.1 Essential protein with similarity to Rpl24Ap and Rpl24Bp, associated with pre-60S ribosomal subunits 1620953 8199117 PAS_chr2-2_0412 Pichia pastoris GS115 Essential protein with similarity to Rpl24Ap and Rpl24Bp, associated with pre-60S ribosomal subunits XP_002491776.1 1620354 D 644223 CDS PAS_chr2-2_0497 254569334 8199116 complement(join(1621003..1621556,1621600..1622098)) 1 NC_012964.1 hypothetical protein 1622098 8199116 PAS_chr2-2_0497 Pichia pastoris GS115 hypothetical protein XP_002491777.1 1621003 R 644223 CDS PAS_chr2-2_0410 254569336 8198299 complement(1622712..1625159) 1 NC_012964.1 Zinc finger transcription factor containing a Zn(2)-Cys(6) binuclear cluster domain 1625159 8198299 PAS_chr2-2_0410 Pichia pastoris GS115 Zinc finger transcription factor containing a Zn(2)-Cys(6) binuclear cluster domain XP_002491778.1 1622712 R 644223 CDS PAS_chr2-2_0496 254569338 8199115 complement(1625307..1627067) 1 NC_012964.1 hypothetical protein 1627067 8199115 PAS_chr2-2_0496 Pichia pastoris GS115 hypothetical protein XP_002491779.1 1625307 R 644223 CDS PAS_chr2-2_0409 254569340 8198298 complement(1627639..1629888) 1 NC_012964.1 Mitochondrial elongation factor involved in translational elongation 1629888 8198298 PAS_chr2-2_0409 Pichia pastoris GS115 Mitochondrial elongation factor involved in translational elongation XP_002491780.1 1627639 R 644223 CDS PAS_chr2-2_0408 254569342 8199114 complement(join(1629988..1630662,1630700..1631002)) 1 NC_012964.1 Catabolic L-serine (L-threonine) deaminase, catalyzes the degradation of L-serine and L-threonine 1631002 8199114 PAS_chr2-2_0408 Pichia pastoris GS115 Catabolic L-serine (L-threonine) deaminase, catalyzes the degradation of L-serine and L-threonine XP_002491781.1 1629988 R 644223 CDS PAS_chr2-2_0407 254569344 8199113 1631698..1632936 1 NC_012964.1 Beta subunit of succinyl-CoA ligase, which is a mitochondrial enzyme of the TCA cycle 1632936 8199113 PAS_chr2-2_0407 Pichia pastoris GS115 Beta subunit of succinyl-CoA ligase, which is a mitochondrial enzyme of the TCA cycle XP_002491782.1 1631698 D 644223 CDS PAS_chr2-2_0406 254569346 8199112 complement(1633096..1634814) 1 NC_012964.1 hypothetical protein 1634814 8199112 PAS_chr2-2_0406 Pichia pastoris GS115 hypothetical protein XP_002491783.1 1633096 R 644223 CDS PAS_chr2-2_0405 254569348 8199111 join(1635645..1635671,1635776..1637536) 1 NC_012964.1 Protein involved in clathrin cage assembly 1637536 8199111 PAS_chr2-2_0405 Pichia pastoris GS115 Protein involved in clathrin cage assembly XP_002491784.1 1635645 D 644223 CDS PAS_chr2-2_0403 254569350 8199110 complement(1638315..1638683) 1 NC_012964.1 hypothetical protein 1638683 8199110 PAS_chr2-2_0403 Pichia pastoris GS115 hypothetical protein XP_002491785.1 1638315 R 644223 CDS PAS_chr2-2_0495 254569352 8199109 complement(1639356..1640978) 1 NC_012964.1 hypothetical protein 1640978 8199109 PAS_chr2-2_0495 Pichia pastoris GS115 hypothetical protein XP_002491786.1 1639356 R 644223 CDS PAS_chr2-2_0402 254569354 8198297 complement(1641113..1642804) 1 NC_012964.1 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p 1642804 8198297 PAS_chr2-2_0402 Pichia pastoris GS115 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p XP_002491787.1 1641113 R 644223 CDS PAS_chr2-2_0401 254569356 8199108 1643158..1644261 1 NC_012964.1 Cholinephosphate cytidylyltransferase, also known as CTP:phosphocholine cytidylyltransferase 1644261 8199108 PAS_chr2-2_0401 Pichia pastoris GS115 Cholinephosphate cytidylyltransferase, also known as CTP:phosphocholine cytidylyltransferase XP_002491788.1 1643158 D 644223 CDS PAS_chr2-2_0400 254569358 8199107 complement(1644380..1645783) 1 NC_012964.1 WD repeat-containing protein 1645783 8199107 PAS_chr2-2_0400 Pichia pastoris GS115 WD repeat-containing protein XP_002491789.1 1644380 R 644223 CDS PAS_chr2-2_0399 254569360 8199106 1646323..1646472 1 NC_012964.1 hypothetical protein 1646472 8199106 PAS_chr2-2_0399 Pichia pastoris GS115 hypothetical protein XP_002491790.1 1646323 D 644223 CDS PAS_chr2-2_0398 254569362 8199105 complement(1647041..1647967) 1 NC_012964.1 Protein, unknown function, involved in proteolytic activation of Rim101p in response to alkaline pH 1647967 8199105 PAS_chr2-2_0398 Pichia pastoris GS115 Protein, unknown function, involved in proteolytic activation of Rim101p in response to alkaline pH XP_002491791.1 1647041 R 644223 CDS PAS_chr2-2_0397 254569364 8199104 complement(1648165..1650129) 1 NC_012964.1 Putative protein of unknown function 1650129 8199104 PAS_chr2-2_0397 Pichia pastoris GS115 Putative protein of unknown function XP_002491792.1 1648165 R 644223 CDS PAS_chr2-2_0395 254569366 8199103 1651008..1652423 1 NC_012964.1 hypothetical protein 1652423 8199103 PAS_chr2-2_0395 Pichia pastoris GS115 hypothetical protein XP_002491793.1 1651008 D 644223 CDS PAS_chr2-2_0394 254569368 8199102 1652589..1653575 1 NC_012964.1 hypothetical protein 1653575 8199102 PAS_chr2-2_0394 Pichia pastoris GS115 hypothetical protein XP_002491794.1 1652589 D 644223 CDS PAS_chr2-2_0393 254569370 8199101 1654019..1654642 1 NC_012964.1 Putative protein with similarity to predicted tyrosine phosphatases Oca1p and Siw14p 1654642 8199101 PAS_chr2-2_0393 Pichia pastoris GS115 Putative protein with similarity to predicted tyrosine phosphatases Oca1p and Siw14p XP_002491795.1 1654019 D 644223 CDS PAS_chr2-2_0392 254569372 8199100 complement(1654731..1655582) 1 NC_012964.1 Mitochondrial porin (voltage-dependent anion channel), outer membrane protein 1655582 8199100 PAS_chr2-2_0392 Pichia pastoris GS115 Mitochondrial porin (voltage-dependent anion channel), outer membrane protein XP_002491796.1 1654731 R 644223 CDS PAS_chr2-2_0391 254569374 8199099 complement(1655878..1657326) 1 NC_012964.1 Ammonium permease 1657326 8199099 PAS_chr2-2_0391 Pichia pastoris GS115 Ammonium permease XP_002491797.1 1655878 R 644223 CDS PAS_chr2-2_0388 254569376 8199098 1659214..1660404 1 NC_012964.1 hypothetical protein 1660404 8199098 PAS_chr2-2_0388 Pichia pastoris GS115 hypothetical protein XP_002491798.1 1659214 D 644223 CDS PAS_chr2-2_0387 254569378 8199097 complement(1660528..1665450) 1 NC_012964.1 RNA polymerase I subunit 1665450 8199097 PAS_chr2-2_0387 Pichia pastoris GS115 RNA polymerase I subunit XP_002491799.1 1660528 R 644223 CDS PAS_chr2-2_0385 254569380 8199096 1666176..1669895 1 NC_012964.1 Essential nucleoporin 1669895 8199096 PAS_chr2-2_0385 Pichia pastoris GS115 Essential nucleoporin XP_002491800.1 1666176 D 644223 CDS PAS_chr2-2_0384 254569382 8199095 complement(1670017..1670982) 1 NC_012964.1 Essential iron-sulfur cluster binding protein localized in the cytoplasm 1670982 8199095 PAS_chr2-2_0384 Pichia pastoris GS115 Essential iron-sulfur cluster binding protein localized in the cytoplasm XP_002491801.1 1670017 R 644223 CDS PAS_chr2-2_0383 254569384 8199094 1671190..1674375 1 NC_012964.1 Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes 1674375 8199094 PAS_chr2-2_0383 Pichia pastoris GS115 Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes XP_002491802.1 1671190 D 644223 CDS PAS_chr2-2_0382 254569386 8199093 complement(1674449..1674934) 1 NC_012964.1 Thiol peroxidase that functions as a hydroperoxide receptor 1674934 8199093 PAS_chr2-2_0382 Pichia pastoris GS115 Thiol peroxidase that functions as a hydroperoxide receptor XP_002491803.1 1674449 R 644223 CDS PAS_chr2-2_0381 254569388 8199092 1675100..1675606 1 NC_012964.1 Peptidylprolyl-cis/trans-isomerase (PPIase) 1675606 8199092 PAS_chr2-2_0381 Pichia pastoris GS115 Peptidylprolyl-cis/trans-isomerase (PPIase) XP_002491804.1 1675100 D 644223 CDS PAS_chr2-2_0380 254569390 8199091 1676031..1678796 1 NC_012964.1 Zinc-dependent metallopeptidase yscII, may have a role in obtaining leucine from dipeptide substrate 1678796 8199091 PAS_chr2-2_0380 Pichia pastoris GS115 Zinc-dependent metallopeptidase yscII, may have a role in obtaining leucine from dipeptide substrate XP_002491805.1 1676031 D 644223 CDS PAS_chr2-2_0379 254569392 8199090 complement(1678831..1680657) 1 NC_012964.1 Probable RNA m(5)C methyltransferase 1680657 8199090 PAS_chr2-2_0379 Pichia pastoris GS115 Probable RNA m(5)C methyltransferase XP_002491806.1 1678831 R 644223 CDS PAS_chr2-2_0378 254569394 8199089 1680898..1683399 1 NC_012964.1 Topoisomerase II-associated deadenylation-dependent mRNA-decapping factor 1683399 8199089 PAS_chr2-2_0378 Pichia pastoris GS115 Topoisomerase II-associated deadenylation-dependent mRNA-decapping factor XP_002491807.1 1680898 D 644223 CDS PAS_chr2-2_0377 254569396 8199088 complement(1683977..1685386) 1 NC_012964.1 Mitochondrial ribosomal component of the small subunit 1685386 8199088 PAS_chr2-2_0377 Pichia pastoris GS115 Mitochondrial ribosomal component of the small subunit XP_002491808.1 1683977 R 644223 CDS PAS_chr2-2_0376 254569398 8199087 1685564..1686277 1 NC_012964.1 hypothetical protein 1686277 8199087 PAS_chr2-2_0376 Pichia pastoris GS115 hypothetical protein XP_002491809.1 1685564 D 644223 CDS PAS_chr2-2_0375 254569400 8199086 complement(1686352..1686765) 1 NC_012964.1 Peptidyl-prolyl cis-trans isomerase (PPIase), binds to the drugs FK506 and rapamycin 1686765 8199086 PAS_chr2-2_0375 Pichia pastoris GS115 Peptidyl-prolyl cis-trans isomerase (PPIase), binds to the drugs FK506 and rapamycin XP_002491810.1 1686352 R 644223 CDS PAS_chr2-2_0374 254569402 8199085 complement(1686848..1690090) 1 NC_012964.1 hypothetical protein 1690090 8199085 PAS_chr2-2_0374 Pichia pastoris GS115 hypothetical protein XP_002491811.1 1686848 R 644223 CDS PAS_chr2-2_0373 254569404 8199084 complement(1690209..1691582) 1 NC_012964.1 Protein with a role in urmylation and in invasive and pseudohyphal growth 1691582 8199084 PAS_chr2-2_0373 Pichia pastoris GS115 Protein with a role in urmylation and in invasive and pseudohyphal growth XP_002491812.1 1690209 R 644223 CDS PAS_chr2-2_0372 254569406 8199083 1691906..1692199 1 NC_012964.1 Mitochondrial intermembrane space protein that functions in mitochondrial copper homeostasis 1692199 8199083 PAS_chr2-2_0372 Pichia pastoris GS115 Mitochondrial intermembrane space protein that functions in mitochondrial copper homeostasis XP_002491813.1 1691906 D 644223 CDS PAS_chr2-2_0371 254569408 8199082 complement(1692225..1694063) 1 NC_012964.1 hypothetical protein 1694063 8199082 PAS_chr2-2_0371 Pichia pastoris GS115 hypothetical protein XP_002491814.1 1692225 R 644223 CDS PAS_chr2-2_0370 254569410 8199081 1694300..1696117 1 NC_012964.1 Component (70 kDa) of the TOM (translocase of outer membrane) complex 1696117 8199081 PAS_chr2-2_0370 Pichia pastoris GS115 Component (70 kDa) of the TOM (translocase of outer membrane) complex XP_002491815.1 1694300 D 644223 CDS PAS_chr2-2_0369 254569412 8199080 1696268..1696765 1 NC_012964.1 hypothetical protein 1696765 8199080 PAS_chr2-2_0369 Pichia pastoris GS115 hypothetical protein XP_002491816.1 1696268 D 644223 CDS PAS_chr2-2_0368 254569414 8199079 1697103..1697453 1 NC_012964.1 Putative protein of unknown function 1697453 8199079 PAS_chr2-2_0368 Pichia pastoris GS115 Putative protein of unknown function XP_002491817.1 1697103 D 644223 CDS PAS_chr2-2_0367 254569416 8199078 complement(1697516..1700452) 1 NC_012964.1 Protein of unknown function which may contribute to lipid homeostasis and/or apoptosis 1700452 8199078 PAS_chr2-2_0367 Pichia pastoris GS115 Protein of unknown function which may contribute to lipid homeostasis and/or apoptosis XP_002491818.1 1697516 R 644223 CDS PAS_chr2-2_0366 254569418 8199077 1700655..1701134 1 NC_012964.1 hypothetical protein 1701134 8199077 PAS_chr2-2_0366 Pichia pastoris GS115 hypothetical protein XP_002491819.1 1700655 D 644223 CDS PAS_chr2-2_0365 254569420 8199076 1701459..1702508 1 NC_012964.1 hypothetical protein 1702508 8199076 PAS_chr2-2_0365 Pichia pastoris GS115 hypothetical protein XP_002491820.1 1701459 D 644223 CDS PAS_chr2-2_0494 254569422 8199075 1702649..1705711 1 NC_012964.1 hypothetical protein 1705711 8199075 PAS_chr2-2_0494 Pichia pastoris GS115 hypothetical protein XP_002491821.1 1702649 D 644223 CDS PAS_chr2-2_0364 254569424 8198296 1705880..1708753 1 NC_012964.1 DNA-binding protein of the mitochondria involved in repair of mitochondrial DNA 1708753 8198296 PAS_chr2-2_0364 Pichia pastoris GS115 DNA-binding protein of the mitochondria involved in repair of mitochondrial DNA XP_002491822.1 1705880 D 644223 CDS PAS_chr2-2_0363 254569426 8199074 complement(1708811..1710484) 1 NC_012964.1 Protein required for the assembly of box H/ACA snoRNPs and for pre-rRNA processing 1710484 8199074 PAS_chr2-2_0363 Pichia pastoris GS115 Protein required for the assembly of box H/ACA snoRNPs and for pre-rRNA processing XP_002491823.1 1708811 R 644223 CDS PAS_chr2-2_0362 254569428 8199073 complement(1710626..1712878) 1 NC_012964.1 Meiosis-specific transcription factor 1712878 8199073 PAS_chr2-2_0362 Pichia pastoris GS115 Meiosis-specific transcription factor XP_002491824.1 1710626 R 644223 CDS PAS_chr2-2_0360 254569430 8199072 1713919..1717104 1 NC_012964.1 Essential protein of unknown function 1717104 8199072 PAS_chr2-2_0360 Pichia pastoris GS115 Essential protein of unknown function XP_002491825.1 1713919 D 644223 CDS PAS_chr2-2_0359 254569432 8198304 complement(join(1717129..1717809,1717869..1717925)) 1 NC_012964.1 Nicotinamide riboside kinase 1717925 8198304 PAS_chr2-2_0359 Pichia pastoris GS115 Nicotinamide riboside kinase XP_002491826.1 1717129 R 644223 CDS PAS_chr2-2_0358 254569434 8198251 1718088..1718690 1 NC_012964.1 Protein of unknown function required for establishment of sister chromatid cohesion 1718690 8198251 PAS_chr2-2_0358 Pichia pastoris GS115 Protein of unknown function required for establishment of sister chromatid cohesion XP_002491827.1 1718088 D 644223 CDS PAS_chr2-2_0357 254569436 8198694 1718838..1720010 1 NC_012964.1 sn-1,2-diacylglycerol ethanolamine-and cholinephosphotranferase 1720010 8198694 PAS_chr2-2_0357 Pichia pastoris GS115 sn-1,2-diacylglycerol ethanolamine-and cholinephosphotranferase XP_002491828.1 1718838 D 644223 CDS PAS_chr2-2_0356 254569438 8198693 complement(1720066..1720515) 1 NC_012964.1 hypothetical protein 1720515 8198693 PAS_chr2-2_0356 Pichia pastoris GS115 hypothetical protein XP_002491829.1 1720066 R 644223 CDS PAS_chr2-2_0355 254569440 8198692 1721161..1722012 1 NC_012964.1 Mitochondrial inner membrane carnitine transporter 1722012 8198692 PAS_chr2-2_0355 Pichia pastoris GS115 Mitochondrial inner membrane carnitine transporter XP_002491830.1 1721161 D 644223 CDS PAS_chr2-2_0354 254569442 8198691 complement(1722032..1724542) 1 NC_012964.1 Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex 1724542 8198691 PAS_chr2-2_0354 Pichia pastoris GS115 Component of the microtubule-nucleating Tub4p (gamma-tubulin) complex XP_002491831.1 1722032 R 644223 CDS PAS_chr2-2_0353 254569444 8198690 complement(1724795..1727560) 1 NC_012964.1 Protein involved in G1 cell cycle arrest in response to pheromon 1727560 8198690 PAS_chr2-2_0353 Pichia pastoris GS115 Protein involved in G1 cell cycle arrest in response to pheromon XP_002491832.1 1724795 R 644223 CDS PAS_chr2-2_0352 254569446 8198689 join(1727931..1727968,1728025..1728565) 1 NC_012964.1 Protein of unknown function that may function in RNA processing 1728565 8198689 PAS_chr2-2_0352 Pichia pastoris GS115 Protein of unknown function that may function in RNA processing XP_002491833.1 1727931 D 644223 CDS PAS_chr2-2_0351 254569448 8198688 complement(1728574..1729782) 1 NC_012964.1 hypothetical protein 1729782 8198688 PAS_chr2-2_0351 Pichia pastoris GS115 hypothetical protein XP_002491834.1 1728574 R 644223 CDS PAS_chr2-2_0350 254569450 8198250 complement(1730678..1731529) 1 NC_012964.1 Target membrane receptor (t-SNARE) 1731529 8198250 PAS_chr2-2_0350 Pichia pastoris GS115 Target membrane receptor (t-SNARE) XP_002491835.1 1730678 R 644223 CDS PAS_chr2-2_0349 254569452 8198249 1731763..1736091 1 NC_012964.1 Catalytic subunit of the DNA polymerase I alpha-primase complex 1736091 8198249 PAS_chr2-2_0349 Pichia pastoris GS115 Catalytic subunit of the DNA polymerase I alpha-primase complex XP_002491836.1 1731763 D 644223 CDS PAS_chr2-2_0348 254569454 8198248 complement(1736126..1736749) 1 NC_012964.1 hypothetical protein 1736749 8198248 PAS_chr2-2_0348 Pichia pastoris GS115 hypothetical protein XP_002491837.1 1736126 R 644223 CDS PAS_chr2-2_0493 254569456 8198247 1736954..1738315 1 NC_012964.1 hypothetical protein 1738315 8198247 PAS_chr2-2_0493 Pichia pastoris GS115 hypothetical protein XP_002491838.1 1736954 D 644223 CDS PAS_chr2-2_0347 254569458 8198295 join(1738527..1738533,1738592..1739277) 1 NC_012964.1 GTP-binding protein of the ras superfamily required for bud site selection 1739277 8198295 PAS_chr2-2_0347 Pichia pastoris GS115 GTP-binding protein of the ras superfamily required for bud site selection XP_002491839.1 1738527 D 644223 CDS PAS_chr2-2_0346 254569460 8198246 complement(1739867..1740274) 1 NC_012964.1 Epsilon subunit of the oligosaccharyltransferase complex of the ER lumen 1740274 8198246 PAS_chr2-2_0346 Pichia pastoris GS115 Epsilon subunit of the oligosaccharyltransferase complex of the ER lumen XP_002491840.1 1739867 R 644223 CDS PAS_chr2-2_0345 254569462 8198245 1740456..1741067 1 NC_012964.1 Putative protein tyrosine phosphatase 1741067 8198245 PAS_chr2-2_0345 Pichia pastoris GS115 Putative protein tyrosine phosphatase XP_002491841.1 1740456 D 644223 CDS PAS_chr2-2_0344 254569464 8198244 complement(1741110..1741562) 1 NC_012964.1 Mitochondrial inner membrane protein 1741562 8198244 PAS_chr2-2_0344 Pichia pastoris GS115 Mitochondrial inner membrane protein XP_002491842.1 1741110 R 644223 CDS PAS_chr2-2_0343 254569466 8198243 1741790..1743634 1 NC_012964.1 Vacuolar transporter, exports large neutral amino acids from the vacuole 1743634 8198243 PAS_chr2-2_0343 Pichia pastoris GS115 Vacuolar transporter, exports large neutral amino acids from the vacuole XP_002491843.1 1741790 D 644223 CDS PAS_chr2-2_0342 254569468 8198242 1744145..1745215 1 NC_012964.1 hypothetical protein 1745215 8198242 PAS_chr2-2_0342 Pichia pastoris GS115 hypothetical protein XP_002491844.1 1744145 D 644223 CDS PAS_chr2-2_0341 254569470 8198241 1745378..1746313 1 NC_012964.1 Metalloprotease subunit of the 19S regulatory particle of the 26S proteasome lid 1746313 8198241 PAS_chr2-2_0341 Pichia pastoris GS115 Metalloprotease subunit of the 19S regulatory particle of the 26S proteasome lid XP_002491845.1 1745378 D 644223 CDS PAS_chr2-2_0340 254569472 8198240 complement(1746334..1747668) 1 NC_012964.1 Conserved zinc-finger domain protein involved in pre-mRNA splicing 1747668 8198240 PAS_chr2-2_0340 Pichia pastoris GS115 Conserved zinc-finger domain protein involved in pre-mRNA splicing XP_002491846.1 1746334 R 644223 CDS PAS_chr2-2_0339 254569474 8198239 complement(1747786..1749981) 1 NC_012964.1 Component of the hexameric MCM complex 1749981 8198239 PAS_chr2-2_0339 Pichia pastoris GS115 Component of the hexameric MCM complex XP_002491847.1 1747786 R 644223 CDS PAS_chr2-2_0338 254569476 8198238 1750248..1751306 1 NC_012964.1 Transaldolase, enzyme in the non-oxidative pentose phosphate pathway 1751306 8198238 PAS_chr2-2_0338 Pichia pastoris GS115 Transaldolase, enzyme in the non-oxidative pentose phosphate pathway XP_002491848.1 1750248 D 644223 CDS PAS_chr2-2_0337 254569478 8198237 1751638..1752612 1 NC_012964.1 Transaldolase, enzyme in the non-oxidative pentose phosphate pathway 1752612 8198237 PAS_chr2-2_0337 Pichia pastoris GS115 Transaldolase, enzyme in the non-oxidative pentose phosphate pathway XP_002491849.1 1751638 D 644223 CDS PAS_chr2-2_0336 254569480 8198236 1752839..1753294 1 NC_012964.1 hypothetical protein 1753294 8198236 PAS_chr2-2_0336 Pichia pastoris GS115 hypothetical protein XP_002491850.1 1752839 D 644223 CDS PAS_chr2-2_0335 254569482 8198235 complement(1753357..1753572) 1 NC_012964.1 hypothetical protein 1753572 8198235 PAS_chr2-2_0335 Pichia pastoris GS115 hypothetical protein XP_002491851.1 1753357 R 644223 CDS PAS_chr2-2_0334 254569484 8198234 complement(1753715..1754707) 1 NC_012964.1 Protein with similarity to mammalian electron transfer flavoprotein complex subunit ETF-alpha 1754707 8198234 PAS_chr2-2_0334 Pichia pastoris GS115 Protein with similarity to mammalian electron transfer flavoprotein complex subunit ETF-alpha XP_002491852.1 1753715 R 644223 CDS PAS_chr2-2_0333 254569486 8198233 1755015..1755998 1 NC_012964.1 Putative kinase 1755998 8198233 PAS_chr2-2_0333 Pichia pastoris GS115 Putative kinase XP_002491853.1 1755015 D 644223 CDS PAS_chr2-2_0332 254569488 8198232 complement(1756029..1758116) 1 NC_012964.1 Protein kinase involved in the response to oxidative and osmotic stress 1758116 8198232 PAS_chr2-2_0332 Pichia pastoris GS115 Protein kinase involved in the response to oxidative and osmotic stress XP_002491854.1 1756029 R 644223 CDS PAS_chr2-2_0331 254569490 8198231 complement(1758331..1759269) 1 NC_012964.1 hypothetical protein 1759269 8198231 PAS_chr2-2_0331 Pichia pastoris GS115 hypothetical protein XP_002491855.1 1758331 R 644223 CDS PAS_chr2-2_0330 254569492 8198230 1759545..1760681 1 NC_012964.1 Phosphatidylinositol:ceramide phosphoinositol transferase (IPC synthase) 1760681 8198230 PAS_chr2-2_0330 Pichia pastoris GS115 Phosphatidylinositol:ceramide phosphoinositol transferase (IPC synthase) XP_002491856.1 1759545 D 644223 CDS PAS_chr2-2_0329 254569494 8198229 complement(1761189..1762634) 1 NC_012964.1 Adenylosuccinate lyase, catalyzes two steps in the 'de novo' purine nucleotide biosynthetic pathway 1762634 8198229 PAS_chr2-2_0329 Pichia pastoris GS115 Adenylosuccinate lyase, catalyzes two steps in the 'de novo' purine nucleotide biosynthetic pathway XP_002491857.1 1761189 R 644223 CDS PAS_chr2-2_0328 254569496 8198228 1762909..1764000 1 NC_012964.1 Subunit of the ARP2/3 complex 1764000 8198228 PAS_chr2-2_0328 Pichia pastoris GS115 Subunit of the ARP2/3 complex XP_002491858.1 1762909 D 644223 CDS PAS_chr2-2_0327 254569498 8198227 1764143..1765093 1 NC_012964.1 Putative protein of unknown function 1765093 8198227 PAS_chr2-2_0327 Pichia pastoris GS115 Putative protein of unknown function XP_002491859.1 1764143 D 644223 CDS PAS_chr2-2_0326 254569500 8198226 complement(1765833..1766159) 1 NC_012964.1 Protein component of the small (40S) ribosomal subunit 1766159 8198226 PAS_chr2-2_0326 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002491860.1 1765833 R 644223 CDS PAS_chr2-2_0325 254569502 8198225 1766786..1768597 1 NC_012964.1 Nucleoporin involved in nucleocytoplasmic transport 1768597 8198225 PAS_chr2-2_0325 Pichia pastoris GS115 Nucleoporin involved in nucleocytoplasmic transport XP_002491861.1 1766786 D 644223 CDS PAS_chr2-2_0324 254569504 8198224 complement(1768619..1770352) 1 NC_012964.1 hypothetical protein 1770352 8198224 PAS_chr2-2_0324 Pichia pastoris GS115 hypothetical protein XP_002491862.1 1768619 R 644223 CDS PAS_chr2-2_0323 254569506 8198223 complement(1770722..1772200) 1 NC_012964.1 Co-chaperone that stimulates the ATPase activity of the HSP70 protein Ssc1p 1772200 8198223 PAS_chr2-2_0323 Pichia pastoris GS115 Co-chaperone that stimulates the ATPase activity of the HSP70 protein Ssc1p XP_002491863.1 1770722 R 644223 CDS PAS_chr2-2_0322 254569508 8198222 1772571..1773215 1 NC_012964.1 hypothetical protein 1773215 8198222 PAS_chr2-2_0322 Pichia pastoris GS115 hypothetical protein XP_002491864.1 1772571 D 644223 CDS PAS_chr2-2_0321 254569510 8198221 complement(1773224..1774072) 1 NC_012964.1 hypothetical protein 1774072 8198221 PAS_chr2-2_0321 Pichia pastoris GS115 hypothetical protein XP_002491865.1 1773224 R 644223 CDS PAS_chr2-2_0320 254569512 8198220 1774266..1775909 1 NC_012964.1 Actin-binding protein of the cortical actin cytoskeleton 1775909 8198220 PAS_chr2-2_0320 Pichia pastoris GS115 Actin-binding protein of the cortical actin cytoskeleton XP_002491866.1 1774266 D 644223 CDS PAS_chr2-2_0319 254569514 8198219 complement(1775894..1777522) 1 NC_012964.1 hypothetical protein 1777522 8198219 PAS_chr2-2_0319 Pichia pastoris GS115 hypothetical protein XP_002491867.1 1775894 R 644223 CDS PAS_chr2-2_0318 254569516 8198218 complement(1777774..1779087) 1 NC_012964.1 Phosphomevalonate kinase, an essential cytosolic enzyme 1779087 8198218 PAS_chr2-2_0318 Pichia pastoris GS115 Phosphomevalonate kinase, an essential cytosolic enzyme XP_002491868.1 1777774 R 644223 CDS PAS_chr2-2_0317 254569518 8198217 1779272..1780567 1 NC_012964.1 Prephenate dehydrogenase involved in tyrosine biosynthesis 1780567 8198217 PAS_chr2-2_0317 Pichia pastoris GS115 Prephenate dehydrogenase involved in tyrosine biosynthesis XP_002491869.1 1779272 D 644223 CDS PAS_chr2-2_0316 254569520 8198216 1780774..1781325 1 NC_012964.1 Soluble GTPase with a role in regulation of membrane traffic 1781325 8198216 PAS_chr2-2_0316 Pichia pastoris GS115 Soluble GTPase with a role in regulation of membrane traffic XP_002491870.1 1780774 D 644223 CDS PAS_chr2-2_0315 254569522 8198215 1781555..1783426 1 NC_012964.1 Putative protein of unknown function 1783426 8198215 PAS_chr2-2_0315 Pichia pastoris GS115 Putative protein of unknown function XP_002491871.1 1781555 D 644223 CDS PAS_chr2-2_0314 254569524 8198214 join(1783905..1785432,1785467..1787096,1787150..1787780) 1 NC_012964.1 Glycerophosphocholine (GroPCho) phosphodiesterase 1787780 8198214 PAS_chr2-2_0314 Pichia pastoris GS115 Glycerophosphocholine (GroPCho) phosphodiesterase XP_002491872.1 1783905 D 644223 CDS PAS_chr2-2_0313 254569526 8198213 1787969..1788508 1 NC_012964.1 mitochondrial rhodanese-like protein 1788508 8198213 PAS_chr2-2_0313 Pichia pastoris GS115 mitochondrial rhodanese-like protein XP_002491873.1 1787969 D 644223 CDS PAS_chr2-2_0312 254569528 8198212 1789167..1791209 1 NC_012964.1 hypothetical protein 1791209 8198212 PAS_chr2-2_0312 Pichia pastoris GS115 hypothetical protein XP_002491874.1 1789167 D 644223 CDS PAS_chr2-2_0311 254569530 8198211 complement(1791291..1791803) 1 NC_012964.1 3-hydroxyanthranilic acid dioxygenase, required for the de novo biosynthesis of NAD from tryptophan 1791803 8198211 PAS_chr2-2_0311 Pichia pastoris GS115 3-hydroxyanthranilic acid dioxygenase, required for the de novo biosynthesis of NAD from tryptophan XP_002491875.1 1791291 R 644223 CDS PAS_chr2-2_0310 254569532 8198210 complement(join(1792084..1794372,1794420..1794695)) 1 NC_012964.1 Dipeptidyl aminopeptidase, Golgi integral membrane protein 1794695 8198210 PAS_chr2-2_0310 Pichia pastoris GS115 Dipeptidyl aminopeptidase, Golgi integral membrane protein XP_002491876.1 1792084 R 644223 CDS PAS_chr2-2_0309 254569534 8198209 1794867..1795304 1 NC_012964.1 RNA polymerase subunit ABC14.5, common to RNA polymerases I, II, and III 1795304 8198209 PAS_chr2-2_0309 Pichia pastoris GS115 RNA polymerase subunit ABC14.5, common to RNA polymerases I, II, and III XP_002491877.1 1794867 D 644223 CDS PAS_chr2-2_0308 254569536 8198208 1795566..1796909 1 NC_012964.1 Protein involved in DNA repair, related to the human CSA protein 1796909 8198208 PAS_chr2-2_0308 Pichia pastoris GS115 Protein involved in DNA repair, related to the human CSA protein XP_002491878.1 1795566 D 644223 CDS PAS_chr2-2_0307 254569538 8198207 1797002..1799812 1 NC_012964.1 hypothetical protein 1799812 8198207 PAS_chr2-2_0307 Pichia pastoris GS115 hypothetical protein XP_002491879.1 1797002 D 644223 CDS PAS_chr2-2_0306 254569540 8198206 complement(join(1799862..1803470,1803527..1803541)) 1 NC_012964.1 Subunit of the multiprotein cohesin complex required for sister chromatid cohesion in mitotic cells 1803541 8198206 PAS_chr2-2_0306 Pichia pastoris GS115 Subunit of the multiprotein cohesin complex required for sister chromatid cohesion in mitotic cells XP_002491880.1 1799862 R 644223 CDS PAS_chr2-2_0492 254569542 8198205 complement(1803658..1804836) 1 NC_012964.1 hypothetical protein 1804836 8198205 PAS_chr2-2_0492 Pichia pastoris GS115 hypothetical protein XP_002491881.1 1803658 R 644223 CDS PAS_chr2-2_0305 254569544 8198294 complement(1805044..1807293) 1 NC_012964.1 Putative kinase 1807293 8198294 PAS_chr2-2_0305 Pichia pastoris GS115 Putative kinase XP_002491882.1 1805044 R 644223 CDS PAS_chr2-2_0304 254569546 8198204 complement(1807510..1807818) 1 NC_012964.1 Subunit of a heterodimeric NC2 transcription regulator complex with Ncb2p 1807818 8198204 PAS_chr2-2_0304 Pichia pastoris GS115 Subunit of a heterodimeric NC2 transcription regulator complex with Ncb2p XP_002491883.1 1807510 R 644223 CDS PAS_chr2-2_0303 254569548 8198203 complement(1808079..1809470) 1 NC_012964.1 Putative flavin-dependent monooxygenase, involved in ubiquinone (Coenzyme Q) biosynthesis 1809470 8198203 PAS_chr2-2_0303 Pichia pastoris GS115 Putative flavin-dependent monooxygenase, involved in ubiquinone (Coenzyme Q) biosynthesis XP_002491884.1 1808079 R 644223 CDS PAS_chr2-2_0302 254569550 8198202 1809739..1812066 1 NC_012964.1 Multifunctional enzyme of the folic acid biosynthesis pathway 1812066 8198202 PAS_chr2-2_0302 Pichia pastoris GS115 Multifunctional enzyme of the folic acid biosynthesis pathway XP_002491885.1 1809739 D 644223 CDS PAS_chr2-2_0301 254569552 8198201 complement(1812160..1812675) 1 NC_012964.1 Protein with seven cysteine-rich CCHC zinc-finger motifs, similar to human CNBP 1812675 8198201 PAS_chr2-2_0301 Pichia pastoris GS115 Protein with seven cysteine-rich CCHC zinc-finger motifs, similar to human CNBP XP_002491886.1 1812160 R 644223 CDS PAS_chr2-2_0300 254569554 8198200 complement(1812870..1813913) 1 NC_012964.1 hypothetical protein 1813913 8198200 PAS_chr2-2_0300 Pichia pastoris GS115 hypothetical protein XP_002491887.1 1812870 R 644223 CDS PAS_chr2-2_0299 254569556 8198199 1814520..1818974 1 NC_012964.1 Plasma membrane ATP binding cassette (ABC) transporter 1818974 8198199 PAS_chr2-2_0299 Pichia pastoris GS115 Plasma membrane ATP binding cassette (ABC) transporter XP_002491888.1 1814520 D 644223 CDS PAS_chr2-2_0298 254569558 8198198 1819204..1819503 1 NC_012964.1 Cyclin-dependent protein kinase regulatory subunit and adaptor 1819503 8198198 PAS_chr2-2_0298 Pichia pastoris GS115 Cyclin-dependent protein kinase regulatory subunit and adaptor XP_002491889.1 1819204 D 644223 CDS PAS_chr2-2_0297 254569560 8198197 1819924..1827090 1 NC_012964.1 Genome integrity checkpoint protein and PI kinase superfamily member 1827090 8198197 PAS_chr2-2_0297 Pichia pastoris GS115 Genome integrity checkpoint protein and PI kinase superfamily member XP_002491890.1 1819924 D 644223 CDS PAS_chr2-2_0296 254569562 8198196 complement(1827117..1829531) 1 NC_012964.1 Putative protein of unknown function 1829531 8198196 PAS_chr2-2_0296 Pichia pastoris GS115 Putative protein of unknown function XP_002491891.1 1827117 R 644223 CDS PAS_chr2-2_0491 254569564 8198195 1829940..1832177 1 NC_012964.1 hypothetical protein 1832177 8198195 PAS_chr2-2_0491 Pichia pastoris GS115 hypothetical protein XP_002491892.1 1829940 D 644223 CDS PAS_chr2-2_0295 254569566 8198293 1832433..1837148 1 NC_012964.1 TFIID subunit (150 kDa), involved in RNA polymerase II transcription initiation 1837148 8198293 PAS_chr2-2_0295 Pichia pastoris GS115 TFIID subunit (150 kDa), involved in RNA polymerase II transcription initiation XP_002491893.1 1832433 D 644223 CDS PAS_chr2-2_0294 254569568 8198194 complement(1837216..1838406) 1 NC_012964.1 E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex 1838406 8198194 PAS_chr2-2_0294 Pichia pastoris GS115 E1 alpha subunit of the pyruvate dehydrogenase (PDH) complex XP_002491894.1 1837216 R 644223 CDS PAS_chr2-2_0293 254569570 8198193 1838936..1839766 1 NC_012964.1 Cytochrome c heme lyase (holocytochrome c synthase), attaches heme to apo-cytochrome c 1839766 8198193 PAS_chr2-2_0293 Pichia pastoris GS115 Cytochrome c heme lyase (holocytochrome c synthase), attaches heme to apo-cytochrome c XP_002491895.1 1838936 D 644223 CDS PAS_chr2-2_0490 254569572 8198192 complement(1839822..1841888) 1 NC_012964.1 hypothetical protein 1841888 8198192 PAS_chr2-2_0490 Pichia pastoris GS115 hypothetical protein XP_002491896.1 1839822 R 644223 CDS PAS_chr2-2_0292 254569574 8198292 complement(1842239..1843267) 1 NC_012964.1 Protein containing a CUE domain that binds ubiquitin 1843267 8198292 PAS_chr2-2_0292 Pichia pastoris GS115 Protein containing a CUE domain that binds ubiquitin XP_002491897.1 1842239 R 644223 CDS PAS_chr2-2_0291 254569576 8198191 join(1843987..1844087,1844147..1844324) 1 NC_012964.1 Essential protein of the mitochondrial intermembrane space, forms a complex with Tim9p 1844324 8198191 PAS_chr2-2_0291 Pichia pastoris GS115 Essential protein of the mitochondrial intermembrane space, forms a complex with Tim9p XP_002491898.1 1843987 D 644223 CDS PAS_chr2-2_0290 254569578 8198190 complement(1844409..1845233) 1 NC_012964.1 Cytochrome c1 heme lyase, involved in maturation of cytochrome c1 1845233 8198190 PAS_chr2-2_0290 Pichia pastoris GS115 Cytochrome c1 heme lyase, involved in maturation of cytochrome c1 XP_002491899.1 1844409 R 644223 CDS PAS_chr2-2_0489 254569580 8198189 complement(1845371..1846036) 1 NC_012964.1 hypothetical protein 1846036 8198189 PAS_chr2-2_0489 Pichia pastoris GS115 hypothetical protein XP_002491900.1 1845371 R 644223 CDS PAS_chr2-2_0289 254569582 8198291 complement(1846939..1847709) 1 NC_012964.1 hypothetical protein 1847709 8198291 PAS_chr2-2_0289 Pichia pastoris GS115 hypothetical protein XP_002491901.1 1846939 R 644223 CDS PAS_chr2-2_0288 254569584 8198188 complement(1847877..1848860) 1 NC_012964.1 Arginase, responsible for arginine degradation 1848860 8198188 PAS_chr2-2_0288 Pichia pastoris GS115 Arginase, responsible for arginine degradation XP_002491902.1 1847877 R 644223 CDS PAS_chr2-2_0287 254569586 8198187 complement(join(1849685..1850846,1850897..1851312)) 1 NC_012964.1 Protein with DNA-dependent ATPase and ssDNA annealing activities involved in maintenance of genome 1851312 8198187 PAS_chr2-2_0287 Pichia pastoris GS115 Protein with DNA-dependent ATPase and ssDNA annealing activities involved in maintenance of genome XP_002491903.1 1849685 R 644223 CDS PAS_chr2-2_0488 254569588 8198186 complement(1851380..1852300) 1 NC_012964.1 hypothetical protein 1852300 8198186 PAS_chr2-2_0488 Pichia pastoris GS115 hypothetical protein XP_002491904.1 1851380 R 644223 CDS PAS_chr2-2_0286 254569590 8198290 1853579..1855879 1 NC_012964.1 hypothetical protein 1855879 8198290 PAS_chr2-2_0286 Pichia pastoris GS115 hypothetical protein XP_002491905.1 1853579 D 644223 CDS PAS_chr2-2_0285 254569592 8198185 complement(1855890..1857473) 1 NC_012964.1 hypothetical protein 1857473 8198185 PAS_chr2-2_0285 Pichia pastoris GS115 hypothetical protein XP_002491906.1 1855890 R 644223 CDS PAS_chr2-2_0487 254569594 8199300 1857878..1858753 1 NC_012964.1 hypothetical protein 1858753 8199300 PAS_chr2-2_0487 Pichia pastoris GS115 hypothetical protein XP_002491907.1 1857878 D 644223 CDS PAS_chr2-2_0284 254569596 8198289 1858946..1861114 1 NC_012964.1 Transcriptional regulator involved in glucose repression of Gal4p-regulated genes 1861114 8198289 PAS_chr2-2_0284 Pichia pastoris GS115 Transcriptional regulator involved in glucose repression of Gal4p-regulated genes XP_002491908.1 1858946 D 644223 CDS PAS_chr2-2_0486 254569598 8198305 1861245..1861811 1 NC_012964.1 hypothetical protein 1861811 8198305 PAS_chr2-2_0486 Pichia pastoris GS115 hypothetical protein XP_002491909.1 1861245 D 644223 CDS PAS_chr2-2_0283 254569600 8198288 complement(1861885..1862343) 1 NC_012964.1 Membrane anchor subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p) 1862343 8198288 PAS_chr2-2_0283 Pichia pastoris GS115 Membrane anchor subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p) XP_002491910.1 1861885 R 644223 CDS PAS_chr2-2_0282 254569602 8198303 complement(join(1862622..1863845,1863892..1864365)) 1 NC_012964.1 Putative protein with similarity to the allantoate permease (Dal5p) subfamily of the major facilitat 1864365 8198303 PAS_chr2-2_0282 Pichia pastoris GS115 Putative protein with similarity to the allantoate permease (Dal5p) subfamily of the major facilitat XP_002491911.1 1862622 R 644223 CDS PAS_chr2-2_0280 254569604 8198684 1866886..1867848 1 NC_012964.1 Mitochondrial glycosylase/lyase 1867848 8198684 PAS_chr2-2_0280 Pichia pastoris GS115 Mitochondrial glycosylase/lyase XP_002491912.1 1866886 D 644223 CDS PAS_chr2-2_0279 254569606 8198683 1868186..1869103 1 NC_012964.1 hypothetical protein 1869103 8198683 PAS_chr2-2_0279 Pichia pastoris GS115 hypothetical protein XP_002491913.1 1868186 D 644223 CDS PAS_chr2-2_0278 254569608 8198682 1869292..1869942 1 NC_012964.1 Protein with an apparent role in acetylation of N-terminal methionine residues 1869942 8198682 PAS_chr2-2_0278 Pichia pastoris GS115 Protein with an apparent role in acetylation of N-terminal methionine residues XP_002491914.1 1869292 D 644223 CDS PAS_chr2-2_0277 254569610 8198681 complement(join(1870013..1871073,1871121..1871301)) 1 NC_012964.1 Protein of unknown function, localized to the mitochondrial outer membrane 1871301 8198681 PAS_chr2-2_0277 Pichia pastoris GS115 Protein of unknown function, localized to the mitochondrial outer membrane XP_002491915.1 1870013 R 644223 CDS PAS_chr2-2_0276 254569612 8198680 complement(1871441..1872685) 1 NC_012964.1 Plasma membrane sulfite pump involved in sulfite metabolism 1872685 8198680 PAS_chr2-2_0276 Pichia pastoris GS115 Plasma membrane sulfite pump involved in sulfite metabolism XP_002491916.1 1871441 R 644223 CDS PAS_chr2-2_0485 254569614 8198679 1873242..1874270 1 NC_012964.1 hypothetical protein 1874270 8198679 PAS_chr2-2_0485 Pichia pastoris GS115 hypothetical protein XP_002491917.1 1873242 D 644223 CDS PAS_chr2-2_0275 254569616 8198287 1874465..1875877 1 NC_012964.1 Delta subunit of the translation initiation factor eIF2B 1875877 8198287 PAS_chr2-2_0275 Pichia pastoris GS115 Delta subunit of the translation initiation factor eIF2B XP_002491918.1 1874465 D 644223 CDS PAS_chr2-2_0274 254569618 8198678 complement(1876011..1877954) 1 NC_012964.1 B-type regulatory subunit of protein phosphatase 2A (PP2A) 1877954 8198678 PAS_chr2-2_0274 Pichia pastoris GS115 B-type regulatory subunit of protein phosphatase 2A (PP2A) XP_002491919.1 1876011 R 644223 CDS PAS_chr2-2_0273 254569620 8198677 complement(1878380..1878973) 1 NC_012964.1 Protein required for ethanol metabolism 1878973 8198677 PAS_chr2-2_0273 Pichia pastoris GS115 Protein required for ethanol metabolism XP_002491920.1 1878380 R 644223 CDS PAS_chr2-2_0272 254569622 8198676 1879379..1881535 1 NC_012964.1 Subunit of a heterodimeric peroxisomal ATP-binding cassette transporter complex (Pxa1p-Pxa2p) 1881535 8198676 PAS_chr2-2_0272 Pichia pastoris GS115 Subunit of a heterodimeric peroxisomal ATP-binding cassette transporter complex (Pxa1p-Pxa2p) XP_002491921.1 1879379 D 644223 CDS PAS_chr2-2_0484 254569624 8198675 complement(1881557..1882657) 1 NC_012964.1 hypothetical protein 1882657 8198675 PAS_chr2-2_0484 Pichia pastoris GS115 hypothetical protein XP_002491922.1 1881557 R 644223 CDS PAS_chr2-2_0271 254569626 8198286 complement(1882754..1883968) 1 NC_012964.1 GPI-anchored cell wall protein of unknown function 1883968 8198286 PAS_chr2-2_0271 Pichia pastoris GS115 GPI-anchored cell wall protein of unknown function XP_002491923.1 1882754 R 644223 CDS PAS_chr2-2_0270 254569628 8198674 1884518..1889458 1 NC_012964.1 Essential structural subunit of the nuclear pore complex (NPC) 1889458 8198674 PAS_chr2-2_0270 Pichia pastoris GS115 Essential structural subunit of the nuclear pore complex (NPC) XP_002491924.1 1884518 D 644223 CDS PAS_chr2-2_0268 254569630 8198673 join(1889608..1891042,1891091..1891950) 1 NC_012964.1 hypothetical protein 1891950 8198673 PAS_chr2-2_0268 Pichia pastoris GS115 hypothetical protein XP_002491925.1 1889608 D 644223 CDS PAS_chr2-2_0267 254569632 8198672 1892215..1893483 1 NC_012964.1 3-ketoacyl-CoA thiolase with broad chain length specificity 1893483 8198672 PAS_chr2-2_0267 Pichia pastoris GS115 3-ketoacyl-CoA thiolase with broad chain length specificity XP_002491926.1 1892215 D 644223 CDS PAS_chr2-2_0266 254569634 8198671 complement(1894324..1894548) 1 NC_012964.1 Subunit VIII of cytochrome c oxidase 1894548 8198671 PAS_chr2-2_0266 Pichia pastoris GS115 Subunit VIII of cytochrome c oxidase XP_002491927.1 1894324 R 644223 CDS PAS_chr2-2_0265 254569636 8198670 1894860..1895051 1 NC_012964.1 hypothetical protein 1895051 8198670 PAS_chr2-2_0265 Pichia pastoris GS115 hypothetical protein XP_002491928.1 1894860 D 644223 CDS PAS_chr2-2_0264 254569638 8198669 1895511..1897502 1 NC_012964.1 ATP-binding protein that is a subunit of the HOPS complex and the CORVET tethering complex 1897502 8198669 PAS_chr2-2_0264 Pichia pastoris GS115 ATP-binding protein that is a subunit of the HOPS complex and the CORVET tethering complex XP_002491929.1 1895511 D 644223 CDS PAS_chr2-2_0263 254569640 8198668 1897689..1901597 1 NC_012964.1 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA 1901597 8198668 PAS_chr2-2_0263 Pichia pastoris GS115 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA XP_002491930.1 1897689 D 644223 CDS PAS_chr2-2_0483 254569642 8198667 1902261..1902467 1 NC_012964.1 hypothetical protein 1902467 8198667 PAS_chr2-2_0483 Pichia pastoris GS115 hypothetical protein XP_002491931.1 1902261 D 644223 CDS PAS_chr2-2_0262 254569644 8198285 1902718..1902993 1 NC_012964.1 hypothetical protein 1902993 8198285 PAS_chr2-2_0262 Pichia pastoris GS115 hypothetical protein XP_002491932.1 1902718 D 644223 CDS PAS_chr2-2_0261 254569646 8198666 1903206..1903574 1 NC_012964.1 hypothetical protein 1903574 8198666 PAS_chr2-2_0261 Pichia pastoris GS115 hypothetical protein XP_002491933.1 1903206 D 644223 CDS PAS_chr2-2_0260 254569648 8198665 1903777..1906224 1 NC_012964.1 Putative magnesium transporter 1906224 8198665 PAS_chr2-2_0260 Pichia pastoris GS115 Putative magnesium transporter XP_002491934.1 1903777 D 644223 CDS PAS_chr2-2_0259 254569650 8198664 complement(1906282..1908120) 1 NC_012964.1 Bud neck-localized, SH3 domain-containing protein required for cytokinesis 1908120 8198664 PAS_chr2-2_0259 Pichia pastoris GS115 Bud neck-localized, SH3 domain-containing protein required for cytokinesis XP_002491935.1 1906282 R 644223 CDS PAS_chr2-2_0258 254569652 8198663 complement(1908360..1910726) 1 NC_012964.1 hypothetical protein 1910726 8198663 PAS_chr2-2_0258 Pichia pastoris GS115 hypothetical protein XP_002491936.1 1908360 R 644223 CDS PAS_chr2-2_0257 254569654 8198662 complement(1911305..1911661) 1 NC_012964.1 Protein component of the small (40S) ribosomal subunit 1911661 8198662 PAS_chr2-2_0257 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002491937.1 1911305 R 644223 CDS PAS_chr2-2_0256 254569656 8198661 1911950..1913266 1 NC_012964.1 hypothetical protein 1913266 8198661 PAS_chr2-2_0256 Pichia pastoris GS115 hypothetical protein XP_002491938.1 1911950 D 644223 CDS PAS_chr2-2_0255 254569658 8198660 1913538..1913897 1 NC_012964.1 hypothetical protein 1913897 8198660 PAS_chr2-2_0255 Pichia pastoris GS115 hypothetical protein XP_002491939.1 1913538 D 644223 CDS PAS_chr2-2_0254 254569660 8198659 complement(1913964..1914476) 1 NC_012964.1 DNA repair methyltransferase (6-O-methylguanine-DNA methylase) 1914476 8198659 PAS_chr2-2_0254 Pichia pastoris GS115 DNA repair methyltransferase (6-O-methylguanine-DNA methylase) XP_002491940.1 1913964 R 644223 CDS PAS_chr2-2_0482 254569662 8198658 complement(1916362..1918881) 1 NC_012964.1 hypothetical protein 1918881 8198658 PAS_chr2-2_0482 Pichia pastoris GS115 hypothetical protein XP_002491941.1 1916362 R 644223 CDS PAS_chr2-2_0252 254569664 8198284 complement(1922536..1923387) 1 NC_012964.1 Alkaline dihydroceramidase, involved in sphingolipid metabolism 1923387 8198284 PAS_chr2-2_0252 Pichia pastoris GS115 Alkaline dihydroceramidase, involved in sphingolipid metabolism XP_002491942.1 1922536 R 644223 CDS PAS_chr2-2_0251 254569666 8198657 complement(1923742..1924113) 1 NC_012964.1 hypothetical protein 1924113 8198657 PAS_chr2-2_0251 Pichia pastoris GS115 hypothetical protein XP_002491943.1 1923742 R 644223 CDS PAS_chr2-2_0250 254569668 8198656 1924293..1925408 1 NC_012964.1 Subunit of the tRNA splicing endonuclease, which is composed of Sen2p, Sen15p, Sen34p, and Sen54p 1925408 8198656 PAS_chr2-2_0250 Pichia pastoris GS115 Subunit of the tRNA splicing endonuclease, which is composed of Sen2p, Sen15p, Sen34p, and Sen54p XP_002491944.1 1924293 D 644223 CDS PAS_chr2-2_0249 254569670 8198655 1925635..1926651 1 NC_012964.1 Cell-wall L-asparaginase II, involved in asparagine catabolism 1926651 8198655 PAS_chr2-2_0249 Pichia pastoris GS115 Cell-wall L-asparaginase II, involved in asparagine catabolism XP_002491945.1 1925635 D 644223 CDS PAS_chr2-2_0481 254569672 8198654 1927313..1928386 1 NC_012964.1 hypothetical protein 1928386 8198654 PAS_chr2-2_0481 Pichia pastoris GS115 hypothetical protein XP_002491946.1 1927313 D 644223 CDS PAS_chr2-2_0247 254569674 8198283 complement(join(1928504..1929056,1929094..1929206)) 1 NC_012964.1 Beta' regulatory subunit of casein kinase 2, a Ser/Thr protein kinase 1929206 8198283 PAS_chr2-2_0247 Pichia pastoris GS115 Beta' regulatory subunit of casein kinase 2, a Ser/Thr protein kinase XP_002491947.1 1928504 R 644223 CDS PAS_chr2-2_0246 254569676 8198653 1929454..1931781 1 NC_012964.1 Subunit of the HIR complex, a nucleosome assembly complex involved in histone gene transcription 1931781 8198653 PAS_chr2-2_0246 Pichia pastoris GS115 Subunit of the HIR complex, a nucleosome assembly complex involved in histone gene transcription XP_002491948.1 1929454 D 644223 CDS PAS_chr2-2_0245 254569678 8198652 complement(1931819..1932892) 1 NC_012964.1 Mitochondrial tryptophanyl-tRNA synthetase 1932892 8198652 PAS_chr2-2_0245 Pichia pastoris GS115 Mitochondrial tryptophanyl-tRNA synthetase XP_002491949.1 1931819 R 644223 CDS PAS_chr2-2_0244 254569680 8198651 1933205..1933609 1 NC_012964.1 hypothetical protein 1933609 8198651 PAS_chr2-2_0244 Pichia pastoris GS115 hypothetical protein XP_002491950.1 1933205 D 644223 CDS PAS_chr2-2_0480 254569682 8198650 1934060..1935019 1 NC_012964.1 hypothetical protein 1935019 8198650 PAS_chr2-2_0480 Pichia pastoris GS115 hypothetical protein XP_002491951.1 1934060 D 644223 CDS PAS_chr2-2_0243 254569684 8198282 1935267..1938500 1 NC_012964.1 Major karyopherin, involved in export of proteins, RNAs, and ribosomal subunits from the nucleus 1938500 8198282 PAS_chr2-2_0243 Pichia pastoris GS115 Major karyopherin, involved in export of proteins, RNAs, and ribosomal subunits from the nucleus XP_002491952.1 1935267 D 644223 CDS PAS_chr2-2_0479 254569686 8198649 1938882..1940507 1 NC_012964.1 hypothetical protein 1940507 8198649 PAS_chr2-2_0479 Pichia pastoris GS115 hypothetical protein XP_002491953.1 1938882 D 644223 CDS PAS_chr2-2_0242 254569688 8198281 complement(1940597..1941148) 1 NC_012964.1 Component of the SSU processome, which is required for pre-18S rRNA processing 1941148 8198281 PAS_chr2-2_0242 Pichia pastoris GS115 Component of the SSU processome, which is required for pre-18S rRNA processing XP_002491954.1 1940597 R 644223 CDS PAS_chr2-2_0241 254569690 8198648 1941512..1942159 1 NC_012964.1 Mitochondrial ribosomal protein of the large subunit 1942159 8198648 PAS_chr2-2_0241 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002491955.1 1941512 D 644223 CDS PAS_chr2-2_0240 254569692 8198647 1942385..1943173 1 NC_012964.1 Mitochondrial ribosomal protein of the large subunit 1943173 8198647 PAS_chr2-2_0240 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002491956.1 1942385 D 644223 CDS PAS_chr2-2_0239 254569694 8198646 complement(1943544..1944386) 1 NC_012964.1 RING finger protein that interacts with the arginine methyltransferase Hmt1p 1944386 8198646 PAS_chr2-2_0239 Pichia pastoris GS115 RING finger protein that interacts with the arginine methyltransferase Hmt1p XP_002491957.1 1943544 R 644223 CDS PAS_chr2-2_0238 254569696 8198645 1944630..1946768 1 NC_012964.1 Threonyl-tRNA synthetase, essential cytoplasmic protein 1946768 8198645 PAS_chr2-2_0238 Pichia pastoris GS115 Threonyl-tRNA synthetase, essential cytoplasmic protein XP_002491958.1 1944630 D 644223 CDS PAS_chr2-2_0237 254569698 8198644 complement(1946794..1947438) 1 NC_012964.1 hypothetical protein 1947438 8198644 PAS_chr2-2_0237 Pichia pastoris GS115 hypothetical protein XP_002491959.1 1946794 R 644223 CDS PAS_chr2-2_0236 254569700 8198643 1947811..1948326 1 NC_012964.1 hypothetical protein 1948326 8198643 PAS_chr2-2_0236 Pichia pastoris GS115 hypothetical protein XP_002491960.1 1947811 D 644223 CDS PAS_chr2-2_0235 254569702 8198642 complement(1948514..1948933) 1 NC_012964.1 hypothetical protein 1948933 8198642 PAS_chr2-2_0235 Pichia pastoris GS115 hypothetical protein XP_002491961.1 1948514 R 644223 CDS PAS_chr2-2_0234 254569704 8198641 1949616..1950638 1 NC_012964.1 Carboxyl methyltransferase 1950638 8198641 PAS_chr2-2_0234 Pichia pastoris GS115 Carboxyl methyltransferase XP_002491962.1 1949616 D 644223 CDS PAS_chr2-2_0233 254569706 8198640 complement(1950680..1952053) 1 NC_012964.1 hypothetical protein 1952053 8198640 PAS_chr2-2_0233 Pichia pastoris GS115 hypothetical protein XP_002491963.1 1950680 R 644223 CDS PAS_chr2-2_0232 254569708 8198639 1952752..1956108 1 NC_012964.1 Haploid specific endoprotease 1956108 8198639 PAS_chr2-2_0232 Pichia pastoris GS115 Haploid specific endoprotease XP_002491964.1 1952752 D 644223 CDS PAS_chr2-2_0231 254569710 8198638 complement(1956130..1956975) 1 NC_012964.1 hypothetical protein 1956975 8198638 PAS_chr2-2_0231 Pichia pastoris GS115 hypothetical protein XP_002491965.1 1956130 R 644223 CDS PAS_chr2-2_0230 254569712 8198637 complement(1957199..1960159) 1 NC_012964.1 One of two isozymes of HMG-CoA reductase that catalyzes the conversion of HMG-CoA to mevalonate 1960159 8198637 PAS_chr2-2_0230 Pichia pastoris GS115 One of two isozymes of HMG-CoA reductase that catalyzes the conversion of HMG-CoA to mevalonate XP_002491966.1 1957199 R 644223 CDS PAS_chr2-2_0476 254569714 8198636 complement(1960401..1961636) 1 NC_012964.1 hypothetical protein 1961636 8198636 PAS_chr2-2_0476 Pichia pastoris GS115 hypothetical protein XP_002491967.1 1960401 R 644223 CDS PAS_chr2-2_0229 254569716 8198280 complement(join(1962003..1962470,1962537..1962545)) 1 NC_012964.1 Protein component of the large (60S) ribosomal subunit 1962545 8198280 PAS_chr2-2_0229 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit XP_002491968.1 1962003 R 644223 CDS PAS_chr2-2_0228 254569718 8198635 complement(1962833..1964083) 1 NC_012964.1 hypothetical protein 1964083 8198635 PAS_chr2-2_0228 Pichia pastoris GS115 hypothetical protein XP_002491969.1 1962833 R 644223 CDS PAS_chr2-2_0227 254569720 8198634 1964300..1965331 1 NC_012964.1 Subunit d of the five-subunit V0 integral membrane domain of vacuolar H+-ATPase (V-ATPase) 1965331 8198634 PAS_chr2-2_0227 Pichia pastoris GS115 Subunit d of the five-subunit V0 integral membrane domain of vacuolar H+-ATPase (V-ATPase) XP_002491970.1 1964300 D 644223 CDS PAS_chr2-2_0226 254569722 8198633 complement(1965419..1968223) 1 NC_012964.1 hypothetical protein 1968223 8198633 PAS_chr2-2_0226 Pichia pastoris GS115 hypothetical protein XP_002491971.1 1965419 R 644223 CDS PAS_chr2-2_0224 254569724 8198632 complement(join(1969266..1969675,1969727..1969760)) 1 NC_012964.1 Component of the TRAPP (transport protein particle) complex 1969760 8198632 PAS_chr2-2_0224 Pichia pastoris GS115 Component of the TRAPP (transport protein particle) complex XP_002491972.1 1969266 R 644223 CDS PAS_chr2-2_0223 254569726 8198631 1970270..1972240 1 NC_012964.1 hypothetical protein 1972240 8198631 PAS_chr2-2_0223 Pichia pastoris GS115 hypothetical protein XP_002491973.1 1970270 D 644223 CDS PAS_chr2-2_0222 254569728 8198630 1972474..1974570 1 NC_012964.1 hypothetical protein 1974570 8198630 PAS_chr2-2_0222 Pichia pastoris GS115 hypothetical protein XP_002491974.1 1972474 D 644223 CDS PAS_chr2-2_0221 254569730 8198629 complement(1974622..1975878) 1 NC_012964.1 Nuclear encoded protein required for translation of COX1 mRNA 1975878 8198629 PAS_chr2-2_0221 Pichia pastoris GS115 Nuclear encoded protein required for translation of COX1 mRNA XP_002491975.1 1974622 R 644223 CDS PAS_chr2-2_0475 254569732 8198628 1976109..1977968 1 NC_012964.1 hypothetical protein 1977968 8198628 PAS_chr2-2_0475 Pichia pastoris GS115 hypothetical protein XP_002491976.1 1976109 D 644223 CDS PAS_chr2-2_0220 254569734 8198279 1978382..1978969 1 NC_012964.1 Thioredoxin peroxidase, acts as both a ribosome-associated and free cytoplasmic antioxidant 1978969 8198279 PAS_chr2-2_0220 Pichia pastoris GS115 Thioredoxin peroxidase, acts as both a ribosome-associated and free cytoplasmic antioxidant XP_002491977.1 1978382 D 644223 CDS PAS_chr2-2_0219 254569736 8198627 complement(1979032..1979592) 1 NC_012964.1 Guanylate kinase, converts GMP to GDP 1979592 8198627 PAS_chr2-2_0219 Pichia pastoris GS115 Guanylate kinase, converts GMP to GDP XP_002491978.1 1979032 R 644223 CDS PAS_chr2-2_0218 254569738 8198626 1979991..1980653 1 NC_012964.1 One of two (see also PTH1) mitochondrially-localized peptidyl-tRNA hydrolases 1980653 8198626 PAS_chr2-2_0218 Pichia pastoris GS115 One of two (see also PTH1) mitochondrially-localized peptidyl-tRNA hydrolases XP_002491979.1 1979991 D 644223 CDS PAS_chr2-2_0217 254569740 8198625 1980934..1983873 1 NC_012964.1 hypothetical protein 1983873 8198625 PAS_chr2-2_0217 Pichia pastoris GS115 hypothetical protein XP_002491980.1 1980934 D 644223 CDS PAS_chr2-2_0216 254569742 8198624 1984350..1985657 1 NC_012964.1 Type 2C protein phosphatase 1985657 8198624 PAS_chr2-2_0216 Pichia pastoris GS115 Type 2C protein phosphatase XP_002491981.1 1984350 D 644223 CDS PAS_chr2-2_0215 254569744 8198623 complement(1985789..1986928) 1 NC_012964.1 3'-->5' exonuclease and endonuclease with a possible role in apoptosis 1986928 8198623 PAS_chr2-2_0215 Pichia pastoris GS115 3'-->5' exonuclease and endonuclease with a possible role in apoptosis XP_002491982.1 1985789 R 644223 CDS PAS_chr2-2_0214 254569746 8198622 1988003..1989085 1 NC_012964.1 Protein of unknown function involved in rRNA and ribosome biosynthesis 1989085 8198622 PAS_chr2-2_0214 Pichia pastoris GS115 Protein of unknown function involved in rRNA and ribosome biosynthesis XP_002491983.1 1988003 D 644223 CDS PAS_chr2-2_0213 254569748 8198621 1989267..1991366 1 NC_012964.1 Histone acetyltransferase catalytic subunit of NuA3 complex that acetylates histone H3, involved in 1991366 8198621 PAS_chr2-2_0213 Pichia pastoris GS115 Histone acetyltransferase catalytic subunit of NuA3 complex that acetylates histone H3, involved in XP_002491984.1 1989267 D 644223 CDS PAS_chr2-2_0212 254569750 8198620 complement(1991371..1992693) 1 NC_012964.1 S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family 1992693 8198620 PAS_chr2-2_0212 Pichia pastoris GS115 S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family XP_002491985.1 1991371 R 644223 CDS PAS_chr2-2_0211 254569752 8198619 complement(1992962..1994659) 1 NC_012964.1 Protein involved in G2/M phase progression and response to DNA damage, interacts with Rad53p 1994659 8198619 PAS_chr2-2_0211 Pichia pastoris GS115 Protein involved in G2/M phase progression and response to DNA damage, interacts with Rad53p XP_002491986.1 1992962 R 644223 CDS PAS_chr2-2_0210 254569754 8198618 join(1994927..1994929,1994995..1995252) 1 NC_012964.1 Beta subunit of the Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p) 1995252 8198618 PAS_chr2-2_0210 Pichia pastoris GS115 Beta subunit of the Sec61p ER translocation complex (Sec61p-Sss1p-Sbh1p) XP_002491987.1 1994927 D 644223 CDS PAS_chr2-2_0209 254569756 8198617 complement(1995321..1997015) 1 NC_012964.1 Protein with similarity to tRNA synthetases 1997015 8198617 PAS_chr2-2_0209 Pichia pastoris GS115 Protein with similarity to tRNA synthetases XP_002491988.1 1995321 R 644223 CDS PAS_chr2-2_0208 254569758 8198616 1997413..1997919 1 NC_012964.1 hypothetical protein 1997919 8198616 PAS_chr2-2_0208 Pichia pastoris GS115 hypothetical protein XP_002491989.1 1997413 D 644223 CDS PAS_chr2-2_0207 254569760 8198615 complement(1997989..1999131) 1 NC_012964.1 Integral peroxisomal membrane required for the translocation of peroxisomal matrix proteins 1999131 8198615 PAS_chr2-2_0207 Pichia pastoris GS115 Integral peroxisomal membrane required for the translocation of peroxisomal matrix proteins XP_002491990.1 1997989 R 644223 CDS PAS_chr2-2_0474 254569762 8198614 complement(1999475..2000824) 1 NC_012964.1 hypothetical protein 2000824 8198614 PAS_chr2-2_0474 Pichia pastoris GS115 hypothetical protein XP_002491991.1 1999475 R 644223 CDS PAS_chr2-2_0206 254569764 8198278 complement(2001184..2001660) 1 NC_012964.1 hypothetical protein 2001660 8198278 PAS_chr2-2_0206 Pichia pastoris GS115 hypothetical protein XP_002491992.1 2001184 R 644223 CDS PAS_chr2-2_0205 254569766 8198613 2002022..2003458 1 NC_012964.1 Essential component of the Sorting and Assembly Machinery of the mitochondrial outer membrane 2003458 8198613 PAS_chr2-2_0205 Pichia pastoris GS115 Essential component of the Sorting and Assembly Machinery of the mitochondrial outer membrane XP_002491993.1 2002022 D 644223 CDS PAS_chr2-2_0204 254569768 8198612 complement(2003535..2004581) 1 NC_012964.1 Putative phosphopantothenoylcysteine synthetase (PPCS) 2004581 8198612 PAS_chr2-2_0204 Pichia pastoris GS115 Putative phosphopantothenoylcysteine synthetase (PPCS) XP_002491994.1 2003535 R 644223 CDS PAS_chr2-2_0203 254569770 8198611 2005508..2007292 1 NC_012964.1 Ubiquitin-specific protease that removes ubiquitin from ubiquitinated proteins 2007292 8198611 PAS_chr2-2_0203 Pichia pastoris GS115 Ubiquitin-specific protease that removes ubiquitin from ubiquitinated proteins XP_002491995.1 2005508 D 644223 CDS PAS_chr2-2_0473 254569772 8198610 complement(2007333..2007734) 1 NC_012964.1 hypothetical protein 2007734 8198610 PAS_chr2-2_0473 Pichia pastoris GS115 hypothetical protein XP_002491996.1 2007333 R 644223 CDS PAS_chr2-2_0202 254569774 8198277 complement(2007954..2009510) 1 NC_012964.1 Transcription factor that activates transcription of genes involved in stress response 2009510 8198277 PAS_chr2-2_0202 Pichia pastoris GS115 Transcription factor that activates transcription of genes involved in stress response XP_002491997.1 2007954 R 644223 CDS PAS_chr2-2_0472 254569776 8198609 2010025..2011077 1 NC_012964.1 hypothetical protein 2011077 8198609 PAS_chr2-2_0472 Pichia pastoris GS115 hypothetical protein XP_002491998.1 2010025 D 644223 CDS PAS_chr2-2_0201 254569778 8198276 2011209..2012822 1 NC_012964.1 Putative mannosyltransferase involved in protein glycosylation 2012822 8198276 PAS_chr2-2_0201 Pichia pastoris GS115 Putative mannosyltransferase involved in protein glycosylation XP_002491999.1 2011209 D 644223 CDS PAS_chr2-2_0200 254569780 8198775 complement(2012923..2013234) 1 NC_012964.1 One of two identical histone H4 proteins (see also HHF2) 2013234 8198775 PAS_chr2-2_0200 Pichia pastoris GS115 One of two identical histone H4 proteins (see also HHF2) XP_002492000.1 2012923 R 644223 CDS PAS_chr2-2_0199 254569782 8198774 2013600..2014013 1 NC_012964.1 One of two identical histone H3 proteins (see also HHT2) 2014013 8198774 PAS_chr2-2_0199 Pichia pastoris GS115 One of two identical histone H3 proteins (see also HHT2) XP_002492001.1 2013600 D 644223 CDS PAS_chr2-2_0198 254569784 8198773 2014222..2014659 1 NC_012964.1 hypothetical protein 2014659 8198773 PAS_chr2-2_0198 Pichia pastoris GS115 hypothetical protein XP_002492002.1 2014222 D 644223 CDS PAS_chr2-2_0197 254569786 8198772 complement(2014691..2015296) 1 NC_012964.1 Tyrosine phosphatase that plays a role in actin filament organization and endocytosis 2015296 8198772 PAS_chr2-2_0197 Pichia pastoris GS115 Tyrosine phosphatase that plays a role in actin filament organization and endocytosis XP_002492003.1 2014691 R 644223 CDS PAS_chr2-2_0196 254569788 8198771 complement(2015829..2017922) 1 NC_012964.1 Protein required for cell viability 2017922 8198771 PAS_chr2-2_0196 Pichia pastoris GS115 Protein required for cell viability XP_002492004.1 2015829 R 644223 CDS PAS_chr2-2_0195 254569790 8198770 2018403..2019782 1 NC_012964.1 Integral ER membrane protein with type-III transmembrane domains 2019782 8198770 PAS_chr2-2_0195 Pichia pastoris GS115 Integral ER membrane protein with type-III transmembrane domains XP_002492005.1 2018403 D 644223 CDS PAS_chr2-2_0194 254569792 8198769 2021105..2021956 1 NC_012964.1 Cyclin-like component of the RNA polymerase II holoenzyme 2021956 8198769 PAS_chr2-2_0194 Pichia pastoris GS115 Cyclin-like component of the RNA polymerase II holoenzyme XP_002492006.1 2021105 D 644223 CDS PAS_chr2-2_0193 254569794 8198768 2022201..2023337 1 NC_012964.1 Ceramide synthase component 2023337 8198768 PAS_chr2-2_0193 Pichia pastoris GS115 Ceramide synthase component XP_002492007.1 2022201 D 644223 CDS PAS_chr2-2_0192 254569796 8198767 complement(2023391..2024725) 1 NC_012964.1 Vacuolar amino acid transporter, exports aspartate and glutamate from the vacuole 2024725 8198767 PAS_chr2-2_0192 Pichia pastoris GS115 Vacuolar amino acid transporter, exports aspartate and glutamate from the vacuole XP_002492008.1 2023391 R 644223 CDS PAS_chr2-2_0191 254569798 8198766 2025157..2026626 1 NC_012964.1 hypothetical protein 2026626 8198766 PAS_chr2-2_0191 Pichia pastoris GS115 hypothetical protein XP_002492009.1 2025157 D 644223 CDS PAS_chr2-2_0190 254569800 8198765 complement(join(2026682..2027223,2027341..2029305,2029366..2029381)) 1 NC_012964.1 Essential subunit of RNA polymerase III transcription factor (TFIIIB), which is involved in transcri 2029381 8198765 PAS_chr2-2_0190 Pichia pastoris GS115 Essential subunit of RNA polymerase III transcription factor (TFIIIB), which is involved in transcri XP_002492010.1 2026682 R 644223 CDS PAS_chr2-2_0189 254569802 8198764 2029525..2030631 1 NC_012964.1 Putative protein of unknown function with similarity to proteins containing WD-40 domains 2030631 8198764 PAS_chr2-2_0189 Pichia pastoris GS115 Putative protein of unknown function with similarity to proteins containing WD-40 domains XP_002492011.1 2029525 D 644223 CDS PAS_chr2-2_0188 254569804 8198763 2030953..2031894 1 NC_012964.1 Protein involved in pre-mRNA splicing, component of a complex containing Cef1p 2031894 8198763 PAS_chr2-2_0188 Pichia pastoris GS115 Protein involved in pre-mRNA splicing, component of a complex containing Cef1p XP_002492012.1 2030953 D 644223 CDS PAS_chr2-2_0187 254569806 8198762 complement(2031919..2033586) 1 NC_012964.1 RNA helicase in the DEAD-box family, involved in RNA isomerization at the 5' splice site 2033586 8198762 PAS_chr2-2_0187 Pichia pastoris GS115 RNA helicase in the DEAD-box family, involved in RNA isomerization at the 5' splice site XP_002492013.1 2031919 R 644223 CDS PAS_chr2-2_0186 254569808 8198761 2034088..2035818 1 NC_012964.1 Peroxisomal membrane signal receptor for the C-terminal tripeptide signal sequence (PTS1) 2035818 8198761 PAS_chr2-2_0186 Pichia pastoris GS115 Peroxisomal membrane signal receptor for the C-terminal tripeptide signal sequence (PTS1) XP_002492014.1 2034088 D 644223 CDS PAS_chr2-2_0185 254569810 8198760 2036017..2037069 1 NC_012964.1 Subunit of a Golgi mannosyltransferase complex 2037069 8198760 PAS_chr2-2_0185 Pichia pastoris GS115 Subunit of a Golgi mannosyltransferase complex XP_002492015.1 2036017 D 644223 CDS PAS_chr2-2_0471 254569812 8198759 join(2037275..2038862,2038973..2040717) 1 NC_012964.1 hypothetical protein 2040717 8198759 PAS_chr2-2_0471 Pichia pastoris GS115 hypothetical protein XP_002492016.1 2037275 D 644223 CDS PAS_chr2-2_0184 254569814 8198275 complement(2040811..2043693) 1 NC_012964.1 Single-stranded DNA endonuclease (with Rad10p) 2043693 8198275 PAS_chr2-2_0184 Pichia pastoris GS115 Single-stranded DNA endonuclease (with Rad10p) XP_002492017.1 2040811 R 644223 CDS PAS_chr2-2_0182 254569816 8198758 2044640..2046430 1 NC_012964.1 Isozyme of methylenetetrahydrofolate reductase 2046430 8198758 PAS_chr2-2_0182 Pichia pastoris GS115 Isozyme of methylenetetrahydrofolate reductase XP_002492018.1 2044640 D 644223 CDS PAS_chr2-2_0181 254569818 8198757 complement(2046462..2047043) 1 NC_012964.1 hypothetical protein 2047043 8198757 PAS_chr2-2_0181 Pichia pastoris GS115 hypothetical protein XP_002492019.1 2046462 R 644223 CDS PAS_chr2-2_0180 254569820 8198756 2047443..2047898 1 NC_012964.1 One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi 2047898 8198756 PAS_chr2-2_0180 Pichia pastoris GS115 One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi XP_002492020.1 2047443 D 644223 CDS PAS_chr2-2_0179 254569822 8198755 2048204..2049469 1 NC_012964.1 Cytoplasmic serine/threonine protein kinase 2049469 8198755 PAS_chr2-2_0179 Pichia pastoris GS115 Cytoplasmic serine/threonine protein kinase XP_002492021.1 2048204 D 644223 CDS PAS_chr2-2_0178 254569824 8198754 complement(2049557..2050894) 1 NC_012964.1 hypothetical protein 2050894 8198754 PAS_chr2-2_0178 Pichia pastoris GS115 hypothetical protein XP_002492022.1 2049557 R 644223 CDS PAS_chr2-2_0470 254569826 8198753 2051866..2052765 1 NC_012964.1 hypothetical protein 2052765 8198753 PAS_chr2-2_0470 Pichia pastoris GS115 hypothetical protein XP_002492023.1 2051866 D 644223 CDS PAS_chr2-2_0177 254569828 8198274 2053578..2054306 1 NC_012964.1 Putative protein of unknown function 2054306 8198274 PAS_chr2-2_0177 Pichia pastoris GS115 Putative protein of unknown function XP_002492024.1 2053578 D 644223 CDS PAS_chr2-2_0176 254569830 8198752 complement(2054368..2055516) 1 NC_012964.1 hypothetical protein 2055516 8198752 PAS_chr2-2_0176 Pichia pastoris GS115 hypothetical protein XP_002492025.1 2054368 R 644223 CDS PAS_chr2-2_0469 254569832 8198751 2055936..2056724 1 NC_012964.1 hypothetical protein 2056724 8198751 PAS_chr2-2_0469 Pichia pastoris GS115 hypothetical protein XP_002492026.1 2055936 D 644223 CDS PAS_chr2-2_0175 254569834 8198273 2056914..2058188 1 NC_012964.1 Mu2-like subunit of the clathrin associated protein complex (AP-2) 2058188 8198273 PAS_chr2-2_0175 Pichia pastoris GS115 Mu2-like subunit of the clathrin associated protein complex (AP-2) XP_002492027.1 2056914 D 644223 CDS PAS_chr2-2_0174 254569836 8198750 2058289..2059554 1 NC_012964.1 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP 2059554 8198750 PAS_chr2-2_0174 Pichia pastoris GS115 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP XP_002492028.1 2058289 D 644223 CDS PAS_chr2-2_0468 254569838 8198749 complement(2059589..2061025) 1 NC_012964.1 hypothetical protein 2061025 8198749 PAS_chr2-2_0468 Pichia pastoris GS115 hypothetical protein XP_002492029.1 2059589 R 644223 CDS PAS_chr2-2_0173 254569840 8198272 complement(2061537..2063501) 1 NC_012964.1 Protein required for normal mitochondrial morphology, has similarity to hemolysins 2063501 8198272 PAS_chr2-2_0173 Pichia pastoris GS115 Protein required for normal mitochondrial morphology, has similarity to hemolysins XP_002492030.1 2061537 R 644223 CDS PAS_chr2-2_0172 254569842 8198748 complement(2063683..2064969) 1 NC_012964.1 Protein that interacts with mitotic cyclin Clb2p 2064969 8198748 PAS_chr2-2_0172 Pichia pastoris GS115 Protein that interacts with mitotic cyclin Clb2p XP_002492031.1 2063683 R 644223 CDS PAS_chr2-2_0171 254569844 8198747 complement(2065172..2066851) 1 NC_012964.1 hypothetical protein 2066851 8198747 PAS_chr2-2_0171 Pichia pastoris GS115 hypothetical protein XP_002492032.1 2065172 R 644223 CDS PAS_chr2-2_0170 254569846 8198746 2067226..2067924 1 NC_012964.1 Mitochondrial ribosomal protein of the small subunit 2067924 8198746 PAS_chr2-2_0170 Pichia pastoris GS115 Mitochondrial ribosomal protein of the small subunit XP_002492033.1 2067226 D 644223 CDS PAS_chr2-2_0169 254569848 8198745 complement(2068096..2068281) 1 NC_012964.1 hypothetical protein 2068281 8198745 PAS_chr2-2_0169 Pichia pastoris GS115 hypothetical protein XP_002492034.1 2068096 R 644223 CDS PAS_chr2-2_0467 254569850 8198744 join(2068472..2068689,2068760..2071238) 1 NC_012964.1 hypothetical protein 2071238 8198744 PAS_chr2-2_0467 Pichia pastoris GS115 hypothetical protein XP_002492035.1 2068472 D 644223 CDS PAS_chr2-2_0168 254569852 8198271 2071465..2072577 1 NC_012964.1 Homo-isocitrate dehydrogenase, an NAD-linked mitochondrial enzyme 2072577 8198271 PAS_chr2-2_0168 Pichia pastoris GS115 Homo-isocitrate dehydrogenase, an NAD-linked mitochondrial enzyme XP_002492036.1 2071465 D 644223 CDS PAS_chr2-2_0167 254569854 8198743 complement(2072584..2073894) 1 NC_012964.1 Putative protein of unknown function with seven beta-strand methyltransferase motif 2073894 8198743 PAS_chr2-2_0167 Pichia pastoris GS115 Putative protein of unknown function with seven beta-strand methyltransferase motif XP_002492037.1 2072584 R 644223 CDS PAS_chr2-2_0166 254569856 8198742 2074349..2076634 1 NC_012964.1 JmjC domain family histone demethylase 2076634 8198742 PAS_chr2-2_0166 Pichia pastoris GS115 JmjC domain family histone demethylase XP_002492038.1 2074349 D 644223 CDS PAS_chr2-2_0165 254569858 8198741 join(2077317..2077432,2077887..2079282) 1 NC_012964.1 Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase 2079282 8198741 PAS_chr2-2_0165 Pichia pastoris GS115 Beta subunit of the F1 sector of mitochondrial F1F0 ATP synthase XP_002492039.1 2077317 D 644223 CDS PAS_chr2-2_0164 254569860 8198740 2079529..2080854 1 NC_012964.1 Highly conserved zinc metalloprotease 2080854 8198740 PAS_chr2-2_0164 Pichia pastoris GS115 Highly conserved zinc metalloprotease XP_002492040.1 2079529 D 644223 CDS PAS_chr2-2_0466 254569862 8198739 2081216..2082901 1 NC_012964.1 hypothetical protein 2082901 8198739 PAS_chr2-2_0466 Pichia pastoris GS115 hypothetical protein XP_002492041.1 2081216 D 644223 CDS PAS_chr2-2_0163 254569864 8198270 2083021..2084052 1 NC_012964.1 Putative protein of unknown function 2084052 8198270 PAS_chr2-2_0163 Pichia pastoris GS115 Putative protein of unknown function XP_002492042.1 2083021 D 644223 CDS PAS_chr2-2_0162 254569866 8198738 complement(2084114..2085160) 1 NC_012964.1 Adenosine kinase, required for the utilization of S-adenosylmethionine (AdoMet) 2085160 8198738 PAS_chr2-2_0162 Pichia pastoris GS115 Adenosine kinase, required for the utilization of S-adenosylmethionine (AdoMet) XP_002492043.1 2084114 R 644223 CDS PAS_chr2-2_0161 254569868 8198737 2085502..2086332 1 NC_012964.1 Putative protein of unknown function 2086332 8198737 PAS_chr2-2_0161 Pichia pastoris GS115 Putative protein of unknown function XP_002492044.1 2085502 D 644223 CDS PAS_chr2-2_0160 254569870 8198736 complement(join(2086398..2087761,2087981..2088029)) 1 NC_012964.1 Vacuolar amino acid transporter, exports aspartate and glutamate from the vacuole 2088029 8198736 PAS_chr2-2_0160 Pichia pastoris GS115 Vacuolar amino acid transporter, exports aspartate and glutamate from the vacuole XP_002492045.1 2086398 R 644223 CDS PAS_chr2-2_0465 254569872 8198735 complement(2088062..2088478) 1 NC_012964.1 hypothetical protein 2088478 8198735 PAS_chr2-2_0465 Pichia pastoris GS115 hypothetical protein XP_002492046.1 2088062 R 644223 CDS PAS_chr2-2_0159 254569874 8198269 2088639..2089985 1 NC_012964.1 Methionine aminopeptidase 2089985 8198269 PAS_chr2-2_0159 Pichia pastoris GS115 Methionine aminopeptidase XP_002492047.1 2088639 D 644223 CDS PAS_chr2-2_0463 254569876 8198734 2090213..2090857 1 NC_012964.1 hypothetical protein 2090857 8198734 PAS_chr2-2_0463 Pichia pastoris GS115 hypothetical protein XP_002492048.1 2090213 D 644223 CDS PAS_chr2-2_0158 254569878 8198268 complement(2091045..2091407) 1 NC_012964.1 Putative protein of unknown function 2091407 8198268 PAS_chr2-2_0158 Pichia pastoris GS115 Putative protein of unknown function XP_002492049.1 2091045 R 644223 CDS PAS_chr2-2_0157 254569880 8198733 complement(2091494..2092627) 1 NC_012964.1 Subunit of the tRNA splicing endonuclease, which is composed of Sen2p, Sen15p, Sen34p, and Sen54p 2092627 8198733 PAS_chr2-2_0157 Pichia pastoris GS115 Subunit of the tRNA splicing endonuclease, which is composed of Sen2p, Sen15p, Sen34p, and Sen54p XP_002492050.1 2091494 R 644223 CDS PAS_chr2-2_0156 254569882 8198732 2093225..2094313 1 NC_012964.1 hypothetical protein 2094313 8198732 PAS_chr2-2_0156 Pichia pastoris GS115 hypothetical protein XP_002492051.1 2093225 D 644223 CDS PAS_chr2-2_0155 254569884 8198731 2094534..2096642 1 NC_012964.1 hypothetical protein 2096642 8198731 PAS_chr2-2_0155 Pichia pastoris GS115 hypothetical protein XP_002492052.1 2094534 D 644223 CDS PAS_chr2-2_0153 254569886 8198730 2097747..2100539 1 NC_012964.1 Major transcriptional repressor of DNA-damage-regulated genes 2100539 8198730 PAS_chr2-2_0153 Pichia pastoris GS115 Major transcriptional repressor of DNA-damage-regulated genes XP_002492053.1 2097747 D 644223 CDS PAS_chr2-2_0152 254569888 8198729 join(2100759..2100951,2101009..2103026) 1 NC_012964.1 hypothetical protein 2103026 8198729 PAS_chr2-2_0152 Pichia pastoris GS115 hypothetical protein XP_002492054.1 2100759 D 644223 CDS PAS_chr2-2_0151 254569890 8198728 2103227..2104267 1 NC_012964.1 Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p 2104267 8198728 PAS_chr2-2_0151 Pichia pastoris GS115 Type II HSP40 co-chaperone that interacts with the HSP70 protein Ssa1p XP_002492055.1 2103227 D 644223 CDS PAS_chr2-2_0150 254569892 8198727 2104428..2105339 1 NC_012964.1 Protein required for the transport of amino acid permease Gap1p from the Golgi to the cell surface 2105339 8198727 PAS_chr2-2_0150 Pichia pastoris GS115 Protein required for the transport of amino acid permease Gap1p from the Golgi to the cell surface XP_002492056.1 2104428 D 644223 CDS PAS_chr2-2_0149 254569894 8198726 complement(2105423..2106871) 1 NC_012964.1 Pseudouridine synthase catalytic subunit of box H/ACA small nucleolar ribonucleoprotein particles 2106871 8198726 PAS_chr2-2_0149 Pichia pastoris GS115 Pseudouridine synthase catalytic subunit of box H/ACA small nucleolar ribonucleoprotein particles XP_002492057.1 2105423 R 644223 CDS PAS_chr2-2_0148 254569896 8198725 join(2107651..2107726,2108251..2109431) 1 NC_012964.1 Cell wall protein that contains a putative GPI-attachment site 2109431 8198725 PAS_chr2-2_0148 Pichia pastoris GS115 Cell wall protein that contains a putative GPI-attachment site XP_002492058.1 2107651 D 644223 CDS PAS_chr2-2_0147 254569898 8198724 complement(join(2109545..2110029,2110095..2110209)) 1 NC_012964.1 hypothetical protein 2110209 8198724 PAS_chr2-2_0147 Pichia pastoris GS115 hypothetical protein XP_002492059.1 2109545 R 644223 CDS PAS_chr2-2_0145 254569900 8198723 complement(join(2111973..2113360,2113399..2113822)) 1 NC_012964.1 Isozyme of methylenetetrahydrofolate reductase 2113822 8198723 PAS_chr2-2_0145 Pichia pastoris GS115 Isozyme of methylenetetrahydrofolate reductase XP_002492060.1 2111973 R 644223 CDS PAS_chr2-2_0144 254569902 8198722 complement(2115345..2115770) 1 NC_012964.1 Protein involved in bud-site selection 2115770 8198722 PAS_chr2-2_0144 Pichia pastoris GS115 Protein involved in bud-site selection XP_002492061.1 2115345 R 644223 CDS PAS_chr2-2_0143 254569904 8198721 complement(2115995..2118799) 1 NC_012964.1 Component of the Trk1p-Trk2p potassium transport system 2118799 8198721 PAS_chr2-2_0143 Pichia pastoris GS115 Component of the Trk1p-Trk2p potassium transport system XP_002492062.1 2115995 R 644223 CDS PAS_chr2-2_0142 254569906 8198720 2119681..2126328 1 NC_012964.1 Bifunctional carbamoylphosphate synthetase (CPSase)-aspartate transcarbamylase (ATCase) 2126328 8198720 PAS_chr2-2_0142 Pichia pastoris GS115 Bifunctional carbamoylphosphate synthetase (CPSase)-aspartate transcarbamylase (ATCase) XP_002492063.1 2119681 D 644223 CDS PAS_chr2-2_0141 254569908 8198719 complement(2126430..2128076) 1 NC_012964.1 Putative histone acetylase, sequence-specific activator of histone genes 2128076 8198719 PAS_chr2-2_0141 Pichia pastoris GS115 Putative histone acetylase, sequence-specific activator of histone genes XP_002492064.1 2126430 R 644223 CDS PAS_chr2-2_0140 254569910 8198718 complement(2128272..2128898) 1 NC_012964.1 Putative histone acetylase, sequence-specific activator of histone genes 2128898 8198718 PAS_chr2-2_0140 Pichia pastoris GS115 Putative histone acetylase, sequence-specific activator of histone genes XP_002492065.1 2128272 R 644223 CDS PAS_chr2-2_0139 254569912 8198717 complement(2129256..2129567) 1 NC_012964.1 hypothetical protein 2129567 8198717 PAS_chr2-2_0139 Pichia pastoris GS115 hypothetical protein XP_002492066.1 2129256 R 644223 CDS PAS_chr2-2_0138 254569914 8198716 2129724..2130365 1 NC_012964.1 One of two (see also PTH2) mitochondrially-localized peptidyl-tRNA hydrolases 2130365 8198716 PAS_chr2-2_0138 Pichia pastoris GS115 One of two (see also PTH2) mitochondrially-localized peptidyl-tRNA hydrolases XP_002492067.1 2129724 D 644223 CDS PAS_chr2-2_0137 254569916 8198715 2130670..2132175 1 NC_012964.1 Cystathionine beta-synthase, catalyzes the synthesis of cystathionine from serine and homocysteine 2132175 8198715 PAS_chr2-2_0137 Pichia pastoris GS115 Cystathionine beta-synthase, catalyzes the synthesis of cystathionine from serine and homocysteine XP_002492068.1 2130670 D 644223 CDS PAS_chr2-2_0136 254569918 8198714 2132341..2132700 1 NC_012964.1 hypothetical protein 2132700 8198714 PAS_chr2-2_0136 Pichia pastoris GS115 hypothetical protein XP_002492069.1 2132341 D 644223 CDS PAS_chr2-2_0135 254569920 8198713 complement(2132742..2133599) 1 NC_012964.1 General transcription elongation factor TFIIS 2133599 8198713 PAS_chr2-2_0135 Pichia pastoris GS115 General transcription elongation factor TFIIS XP_002492070.1 2132742 R 644223 CDS PAS_chr2-2_0134 254569922 8198712 2133797..2134534 1 NC_012964.1 Cleavage and polyadenylation factor I (CF I) component 2134534 8198712 PAS_chr2-2_0134 Pichia pastoris GS115 Cleavage and polyadenylation factor I (CF I) component XP_002492071.1 2133797 D 644223 CDS PAS_chr2-2_0133 254569924 8198711 2134685..2135833 1 NC_012964.1 hypothetical protein 2135833 8198711 PAS_chr2-2_0133 Pichia pastoris GS115 hypothetical protein XP_002492072.1 2134685 D 644223 CDS PAS_chr2-2_0132 254569926 8198710 2135978..2137303 1 NC_012964.1 t-SNARE protein important for fusion of secretory vesicles with the plasma membrane 2137303 8198710 PAS_chr2-2_0132 Pichia pastoris GS115 t-SNARE protein important for fusion of secretory vesicles with the plasma membrane XP_002492073.1 2135978 D 644223 CDS PAS_chr2-2_0462 254569928 8198709 complement(2137371..2138792) 1 NC_012964.1 hypothetical protein 2138792 8198709 PAS_chr2-2_0462 Pichia pastoris GS115 hypothetical protein XP_002492074.1 2137371 R 644223 CDS PAS_chr2-2_0131 254569930 8198267 complement(2139070..2140602) 1 NC_012964.1 Catalase A, breaks down hydrogen peroxide in the peroxisomal matrix formed by acyl-CoA oxidase (Pox1 2140602 8198267 PAS_chr2-2_0131 Pichia pastoris GS115 Catalase A, breaks down hydrogen peroxide in the peroxisomal matrix formed by acyl-CoA oxidase (Pox1 XP_002492075.1 2139070 R 644223 CDS PAS_chr2-2_0130 254569932 8198708 complement(2141295..2142371) 1 NC_012964.1 Essential protein involved in maturation of 18S rRNA 2142371 8198708 PAS_chr2-2_0130 Pichia pastoris GS115 Essential protein involved in maturation of 18S rRNA XP_002492076.1 2141295 R 644223 CDS PAS_chr2-2_0129 254569934 8198707 2142494..2143279 1 NC_012964.1 Protein constituent of 66S pre-ribosomal particles, contributes to processing of the 27S pre-rRNA 2143279 8198707 PAS_chr2-2_0129 Pichia pastoris GS115 Protein constituent of 66S pre-ribosomal particles, contributes to processing of the 27S pre-rRNA XP_002492077.1 2142494 D 644223 CDS PAS_chr2-2_0128 254569936 8198706 complement(2143422..2147141) 1 NC_012964.1 ATPase component of the RSC chromatin remodeling complex 2147141 8198706 PAS_chr2-2_0128 Pichia pastoris GS115 ATPase component of the RSC chromatin remodeling complex XP_002492078.1 2143422 R 644223 CDS PAS_chr2-2_0127 254569938 8198705 2148090..2149220 1 NC_012964.1 Mitochondrial cytochrome-c peroxidase 2149220 8198705 PAS_chr2-2_0127 Pichia pastoris GS115 Mitochondrial cytochrome-c peroxidase XP_002492079.1 2148090 D 644223 CDS PAS_chr2-2_0126 254569940 8198704 complement(2149366..2149944) 1 NC_012964.1 Presequence translocase-associated motor subunit 2149944 8198704 PAS_chr2-2_0126 Pichia pastoris GS115 Presequence translocase-associated motor subunit XP_002492080.1 2149366 R 644223 CDS PAS_chr2-2_0125 254569942 8198703 2150487..2151728 1 NC_012964.1 Subunit of a Golgi mannosyltransferase complex that also contains Anp1p, Mnn9p, Mnn10p, and Hoc1p 2151728 8198703 PAS_chr2-2_0125 Pichia pastoris GS115 Subunit of a Golgi mannosyltransferase complex that also contains Anp1p, Mnn9p, Mnn10p, and Hoc1p XP_002492081.1 2150487 D 644223 CDS PAS_chr2-2_0124 254569944 8198702 complement(2151758..2152816) 1 NC_012964.1 Putative protein of unknown function 2152816 8198702 PAS_chr2-2_0124 Pichia pastoris GS115 Putative protein of unknown function XP_002492082.1 2151758 R 644223 CDS PAS_chr2-2_0123 254569946 8198701 join(2153184..2153373,2153432..2153583) 1 NC_012964.1 hypothetical protein 2153583 8198701 PAS_chr2-2_0123 Pichia pastoris GS115 hypothetical protein XP_002492083.1 2153184 D 644223 CDS PAS_chr2-2_0122 254569948 8198700 complement(2154247..2155677) 1 NC_012964.1 Mitochondrial matrix protein 2155677 8198700 PAS_chr2-2_0122 Pichia pastoris GS115 Mitochondrial matrix protein XP_002492084.1 2154247 R 644223 CDS PAS_chr2-2_0121 254569950 8198699 complement(2155831..2156145) 1 NC_012964.1 Protein proposed to be involved in the modification of N-linked oligosaccharides 2156145 8198699 PAS_chr2-2_0121 Pichia pastoris GS115 Protein proposed to be involved in the modification of N-linked oligosaccharides XP_002492085.1 2155831 R 644223 CDS PAS_chr2-2_0120 254569952 8198698 2156549..2157727 1 NC_012964.1 hypothetical protein 2157727 8198698 PAS_chr2-2_0120 Pichia pastoris GS115 hypothetical protein XP_002492086.1 2156549 D 644223 CDS PAS_chr2-2_0119 254569954 8198449 2157885..2158862 1 NC_012964.1 Conserved protein required for assembly of subunits of mitochondrial F1F0 ATP synthase 2158862 8198449 PAS_chr2-2_0119 Pichia pastoris GS115 Conserved protein required for assembly of subunits of mitochondrial F1F0 ATP synthase XP_002492087.1 2157885 D 644223 CDS PAS_chr2-2_0118 254569956 8198448 complement(2158915..2161572) 1 NC_012964.1 hypothetical protein 2161572 8198448 PAS_chr2-2_0118 Pichia pastoris GS115 hypothetical protein XP_002492088.1 2158915 R 644223 CDS PAS_chr2-2_0117 254569958 8199221 2162310..2163095 1 NC_012964.1 hypothetical protein 2163095 8199221 PAS_chr2-2_0117 Pichia pastoris GS115 hypothetical protein XP_002492089.1 2162310 D 644223 CDS PAS_chr2-2_0116 254569960 8199220 join(2163330..2163379,2163430..2164090) 1 NC_012964.1 ER associated glutathione S-transferase capable of homodimerization 2164090 8199220 PAS_chr2-2_0116 Pichia pastoris GS115 ER associated glutathione S-transferase capable of homodimerization XP_002492090.1 2163330 D 644223 CDS PAS_chr2-2_0115 254569962 8199219 complement(2164080..2165681) 1 NC_012964.1 Boron efflux transporter of the plasma membrane 2165681 8199219 PAS_chr2-2_0115 Pichia pastoris GS115 Boron efflux transporter of the plasma membrane XP_002492091.1 2164080 R 644223 CDS PAS_chr2-2_0114 254569964 8199218 2165897..2167027 1 NC_012964.1 Protein of the endoplasmic reticulum, required for GPI-phospholipase A2 activity 2167027 8199218 PAS_chr2-2_0114 Pichia pastoris GS115 Protein of the endoplasmic reticulum, required for GPI-phospholipase A2 activity XP_002492092.1 2165897 D 644223 CDS PAS_chr2-2_0113 254569966 8199217 2168202..2169779 1 NC_012964.1 Inositol 1-phosphate synthase 2169779 8199217 PAS_chr2-2_0113 Pichia pastoris GS115 Inositol 1-phosphate synthase XP_002492093.1 2168202 D 644223 CDS PAS_chr2-2_0112 254569968 8199216 2170019..2174248 1 NC_012964.1 hypothetical protein 2174248 8199216 PAS_chr2-2_0112 Pichia pastoris GS115 hypothetical protein XP_002492094.1 2170019 D 644223 CDS PAS_chr2-2_0111 254569970 8199215 2174394..2175599 1 NC_012964.1 NAD-dependent glycerol-3-phosphate dehydrogenase, key enzyme of glycerol synthesis 2175599 8199215 PAS_chr2-2_0111 Pichia pastoris GS115 NAD-dependent glycerol-3-phosphate dehydrogenase, key enzyme of glycerol synthesis XP_002492095.1 2174394 D 644223 CDS PAS_chr2-2_0461 254569972 8199214 2175848..2176165 1 NC_012964.1 hypothetical protein 2176165 8199214 PAS_chr2-2_0461 Pichia pastoris GS115 hypothetical protein XP_002492096.1 2175848 D 644223 CDS PAS_chr2-2_0110 254569974 8198266 complement(2176176..2176988) 1 NC_012964.1 Type I membrane protein involved in autophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway 2176988 8198266 PAS_chr2-2_0110 Pichia pastoris GS115 Type I membrane protein involved in autophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway XP_002492097.1 2176176 R 644223 CDS PAS_chr2-2_0109 254569976 8199213 join(2177457..2177765,2177954..2178157) 1 NC_012964.1 Protein component of the large (60S) ribosomal subunit 2178157 8199213 PAS_chr2-2_0109 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit XP_002492098.1 2177457 D 644223 CDS PAS_chr2-2_0108 254569978 8199212 complement(2178215..2179420) 1 NC_012964.1 hypothetical protein 2179420 8199212 PAS_chr2-2_0108 Pichia pastoris GS115 hypothetical protein XP_002492099.1 2178215 R 644223 CDS PAS_chr2-2_0107 254569980 8199211 complement(2179729..2180637) 1 NC_012964.1 hypothetical protein 2180637 8199211 PAS_chr2-2_0107 Pichia pastoris GS115 hypothetical protein XP_002492100.1 2179729 R 644223 CDS PAS_chr2-2_0106 254569982 8199210 2180774..2181580 1 NC_012964.1 Possible U3 snoRNP protein 2181580 8199210 PAS_chr2-2_0106 Pichia pastoris GS115 Possible U3 snoRNP protein XP_002492101.1 2180774 D 644223 CDS PAS_chr2-2_0105 254569984 8199209 2181675..2182865 1 NC_012964.1 Mannosyltransferase involved in N-linked protein glycosylation 2182865 8199209 PAS_chr2-2_0105 Pichia pastoris GS115 Mannosyltransferase involved in N-linked protein glycosylation XP_002492102.1 2181675 D 644223 CDS PAS_chr2-2_0104 254569986 8199208 complement(2182905..2183465) 1 NC_012964.1 RNA polymerase II subunit B32 2183465 8199208 PAS_chr2-2_0104 Pichia pastoris GS115 RNA polymerase II subunit B32 XP_002492103.1 2182905 R 644223 CDS PAS_chr2-2_0103 254569988 8199207 2183810..2186014 1 NC_012964.1 Serine-threonine protein kinase that is part of a glucose-sensing system 2186014 8199207 PAS_chr2-2_0103 Pichia pastoris GS115 Serine-threonine protein kinase that is part of a glucose-sensing system XP_002492104.1 2183810 D 644223 CDS PAS_chr2-2_0102 254569990 8199206 complement(join(2186150..2186554,2186633..2186707)) 1 NC_012964.1 Essential constituent of the mitochondrial inner membrane presequence translocase 2186707 8199206 PAS_chr2-2_0102 Pichia pastoris GS115 Essential constituent of the mitochondrial inner membrane presequence translocase XP_002492105.1 2186150 R 644223 CDS PAS_chr2-2_0101 254569992 8199205 complement(2186818..2188806) 1 NC_012964.1 Protein involved in excretion of putrescine and spermidine 2188806 8199205 PAS_chr2-2_0101 Pichia pastoris GS115 Protein involved in excretion of putrescine and spermidine XP_002492106.1 2186818 R 644223 CDS PAS_chr2-2_0100 254569994 8199204 2188986..2191889 1 NC_012964.1 GTPase component of U5 snRNP involved in mRNA splicing via spliceosome 2191889 8199204 PAS_chr2-2_0100 Pichia pastoris GS115 GTPase component of U5 snRNP involved in mRNA splicing via spliceosome XP_002492107.1 2188986 D 644223 CDS PAS_chr2-2_0099 254569996 8199203 complement(2191954..2193042) 1 NC_012964.1 Essential protein required for the maturation of 25S rRNA and 60S ribosomal subunit assembly 2193042 8199203 PAS_chr2-2_0099 Pichia pastoris GS115 Essential protein required for the maturation of 25S rRNA and 60S ribosomal subunit assembly XP_002492108.1 2191954 R 644223 CDS PAS_chr2-2_0098 254569998 8199202 2193677..2193877 1 NC_012964.1 hypothetical protein 2193877 8199202 PAS_chr2-2_0098 Pichia pastoris GS115 hypothetical protein XP_002492109.1 2193677 D 644223 CDS PAS_chr2-2_0097 254570000 8199201 2194551..2196629 1 NC_012964.1 Ubl (ubiquitin-like protein)-specific protease that cleaves Smt3p protein conjugates 2196629 8199201 PAS_chr2-2_0097 Pichia pastoris GS115 Ubl (ubiquitin-like protein)-specific protease that cleaves Smt3p protein conjugates XP_002492110.1 2194551 D 644223 CDS PAS_chr2-2_0096 254570002 8199200 complement(2196652..2199075) 1 NC_012964.1 Integral inner mitochondrial membrane protein 2199075 8199200 PAS_chr2-2_0096 Pichia pastoris GS115 Integral inner mitochondrial membrane protein XP_002492111.1 2196652 R 644223 CDS PAS_chr2-2_0095 254570004 8199199 complement(2199218..2205154) 1 NC_012964.1 Rho GTPase activating protein (RhoGAP) 2205154 8199199 PAS_chr2-2_0095 Pichia pastoris GS115 Rho GTPase activating protein (RhoGAP) XP_002492112.1 2199218 R 644223 CDS PAS_chr2-2_0094 254570006 8199198 complement(2205425..2208562) 1 NC_012964.1 Chitin synthase II 2208562 8199198 PAS_chr2-2_0094 Pichia pastoris GS115 Chitin synthase II XP_002492113.1 2205425 R 644223 CDS PAS_chr2-2_0460 254570008 8199197 complement(join(2208741..2209312,2209363..2209633)) 1 NC_012964.1 hypothetical protein 2209633 8199197 PAS_chr2-2_0460 Pichia pastoris GS115 hypothetical protein XP_002492114.1 2208741 R 644223 CDS PAS_chr2-2_0093 254570010 8198265 complement(2209736..2210749) 1 NC_012964.1 Putative protein of unknown function 2210749 8198265 PAS_chr2-2_0093 Pichia pastoris GS115 Putative protein of unknown function XP_002492115.1 2209736 R 644223 CDS PAS_chr2-2_0092 254570012 8199196 2211091..2211378 1 NC_012964.1 Chaperone that specifically facilitates the assembly of cytochrome c oxidase 2211378 8199196 PAS_chr2-2_0092 Pichia pastoris GS115 Chaperone that specifically facilitates the assembly of cytochrome c oxidase XP_002492116.1 2211091 D 644223 CDS PAS_chr2-2_0091 254570014 8199195 join(2211604..2211612,2211667..2212329) 1 NC_012964.1 Integral membrane protein localized to late Golgi vesicles along with the v-SNARE Tlg2p 2212329 8199195 PAS_chr2-2_0091 Pichia pastoris GS115 Integral membrane protein localized to late Golgi vesicles along with the v-SNARE Tlg2p XP_002492117.1 2211604 D 644223 CDS PAS_chr2-2_0090 254570016 8199194 complement(2212326..2213312) 1 NC_012964.1 hypothetical protein 2213312 8199194 PAS_chr2-2_0090 Pichia pastoris GS115 hypothetical protein XP_002492118.1 2212326 R 644223 CDS PAS_chr2-2_0089 254570018 8199193 complement(2213529..2215691) 1 NC_012964.1 Member of the PUF protein family 2215691 8199193 PAS_chr2-2_0089 Pichia pastoris GS115 Member of the PUF protein family XP_002492119.1 2213529 R 644223 CDS PAS_chr2-2_0088 254570020 8199192 join(2217057..2217266,2217308..2218291) 1 NC_012964.1 Putative protein of unknown function 2218291 8199192 PAS_chr2-2_0088 Pichia pastoris GS115 Putative protein of unknown function XP_002492120.1 2217057 D 644223 CDS PAS_chr2-2_0087 254570022 8199191 complement(2218447..2218992) 1 NC_012964.1 ADP-ribosylation factor, GTPase of the Ras superfamily 2218992 8199191 PAS_chr2-2_0087 Pichia pastoris GS115 ADP-ribosylation factor, GTPase of the Ras superfamily XP_002492121.1 2218447 R 644223 CDS PAS_chr2-2_0086 254570024 8199190 2219648..2220541 1 NC_012964.1 Mitochondrial ribosomal protein of the small subunit 2220541 8199190 PAS_chr2-2_0086 Pichia pastoris GS115 Mitochondrial ribosomal protein of the small subunit XP_002492122.1 2219648 D 644223 CDS PAS_chr2-2_0085 254570026 8199189 complement(2220623..2222047) 1 NC_012964.1 Cytosolic J-domain-containing protein 2222047 8199189 PAS_chr2-2_0085 Pichia pastoris GS115 Cytosolic J-domain-containing protein XP_002492123.1 2220623 R 644223 CDS PAS_chr2-2_0459 254570028 8199188 complement(2222835..2225081) 1 NC_012964.1 hypothetical protein 2225081 8199188 PAS_chr2-2_0459 Pichia pastoris GS115 hypothetical protein XP_002492124.1 2222835 R 644223 CDS PAS_chr2-2_0084 254570030 8198264 complement(2225270..2226847) 1 NC_012964.1 Repressible alkaline phosphatase, a glycoprotein localized to the vacuole 2226847 8198264 PAS_chr2-2_0084 Pichia pastoris GS115 Repressible alkaline phosphatase, a glycoprotein localized to the vacuole XP_002492125.1 2225270 R 644223 CDS PAS_chr2-2_0083 254570032 8199187 2227076..2227594 1 NC_012964.1 hypothetical protein 2227594 8199187 PAS_chr2-2_0083 Pichia pastoris GS115 hypothetical protein XP_002492126.1 2227076 D 644223 CDS PAS_chr2-2_0082 254570034 8199186 2228169..2228597 1 NC_012964.1 hypothetical protein 2228597 8199186 PAS_chr2-2_0082 Pichia pastoris GS115 hypothetical protein XP_002492127.1 2228169 D 644223 CDS PAS_chr2-2_0081 254570036 8199185 2229435..2230808 1 NC_012964.1 Constituent of the mitochondrial inner membrane presequence translocase (TIM23 complex) 2230808 8199185 PAS_chr2-2_0081 Pichia pastoris GS115 Constituent of the mitochondrial inner membrane presequence translocase (TIM23 complex) XP_002492128.1 2229435 D 644223 CDS PAS_chr2-2_0080 254570038 8199184 2231074..2232141 1 NC_012964.1 Mitochondrial cell death effector that translocates to the nucleus in response to apoptotic stimul 2232141 8199184 PAS_chr2-2_0080 Pichia pastoris GS115 Mitochondrial cell death effector that translocates to the nucleus in response to apoptotic stimul XP_002492129.1 2231074 D 644223 CDS PAS_chr2-2_0079 254570040 8199183 2232498..2233565 1 NC_012964.1 Mitochondrial cell death effector that translocates to the nucleus in response to apoptotic stimuli 2233565 8199183 PAS_chr2-2_0079 Pichia pastoris GS115 Mitochondrial cell death effector that translocates to the nucleus in response to apoptotic stimuli XP_002492130.1 2232498 D 644223 CDS PAS_chr2-2_0078 254570042 8199182 join(2233662..2233710,2233763..2234325) 1 NC_012964.1 GTPase of the Ras superfamily required to recruit Arl1p to the Golgi 2234325 8199182 PAS_chr2-2_0078 Pichia pastoris GS115 GTPase of the Ras superfamily required to recruit Arl1p to the Golgi XP_002492131.1 2233662 D 644223 CDS PAS_chr2-2_0458 254570044 8199181 2234440..2235168 1 NC_012964.1 hypothetical protein 2235168 8199181 PAS_chr2-2_0458 Pichia pastoris GS115 hypothetical protein XP_002492132.1 2234440 D 644223 CDS PAS_chr2-2_0077 254570046 8198263 2235419..2236288 1 NC_012964.1 Putative phosphatidylinositol transfer protein (PITP) 2236288 8198263 PAS_chr2-2_0077 Pichia pastoris GS115 Putative phosphatidylinositol transfer protein (PITP) XP_002492133.1 2235419 D 644223 CDS PAS_chr2-2_0457 254570048 8199180 2236502..2238082 1 NC_012964.1 hypothetical protein 2238082 8199180 PAS_chr2-2_0457 Pichia pastoris GS115 hypothetical protein XP_002492134.1 2236502 D 644223 CDS PAS_chr2-2_0076 254570050 8198262 complement(2238113..2241043) 1 NC_012964.1 Protein involved in glycosylphosphatidylinositol (GPI) anchor synthesis 2241043 8198262 PAS_chr2-2_0076 Pichia pastoris GS115 Protein involved in glycosylphosphatidylinositol (GPI) anchor synthesis XP_002492135.1 2238113 R 644223 CDS PAS_chr2-2_0075 254570052 8199179 complement(2241269..2243407) 1 NC_012964.1 Para-aminobenzoate (PABA) synthase 2243407 8199179 PAS_chr2-2_0075 Pichia pastoris GS115 Para-aminobenzoate (PABA) synthase XP_002492136.1 2241269 R 644223 CDS PAS_chr2-2_0074 254570054 8199178 complement(2243631..2243978) 1 NC_012964.1 Mitochondrial ribosomal protein of the small subunit 2243978 8199178 PAS_chr2-2_0074 Pichia pastoris GS115 Mitochondrial ribosomal protein of the small subunit XP_002492137.1 2243631 R 644223 CDS PAS_chr2-2_0455 254570056 8199177 2244251..2246527 1 NC_012964.1 hypothetical protein 2246527 8199177 PAS_chr2-2_0455 Pichia pastoris GS115 hypothetical protein XP_002492138.1 2244251 D 644223 CDS PAS_chr2-2_0073 254570058 8198260 2246662..2247279 1 NC_012964.1 Beta 3 subunit of the 20S proteasome involved in ubiquitin-dependent catabolism 2247279 8198260 PAS_chr2-2_0073 Pichia pastoris GS115 Beta 3 subunit of the 20S proteasome involved in ubiquitin-dependent catabolism XP_002492139.1 2246662 D 644223 CDS PAS_chr2-2_0456 254570060 8199176 complement(2247308..2247622) 1 NC_012964.1 hypothetical protein 2247622 8199176 PAS_chr2-2_0456 Pichia pastoris GS115 hypothetical protein XP_002492140.1 2247308 R 644223 CDS PAS_chr2-2_0072 254570062 8198261 2247782..2248966 1 NC_012964.1 Protein of unknown function that may interact with ribosomes 2248966 8198261 PAS_chr2-2_0072 Pichia pastoris GS115 Protein of unknown function that may interact with ribosomes XP_002492141.1 2247782 D 644223 CDS PAS_chr2-2_0071 254570064 8199175 complement(2249018..2249545) 1 NC_012964.1 hypothetical protein 2249545 8199175 PAS_chr2-2_0071 Pichia pastoris GS115 hypothetical protein XP_002492142.1 2249018 R 644223 CDS PAS_chr2-2_0070 254570066 8199174 complement(2249870..2250763) 1 NC_012964.1 Nit protein 2250763 8199174 PAS_chr2-2_0070 Pichia pastoris GS115 Nit protein XP_002492143.1 2249870 R 644223 CDS PAS_chr2-2_0068 254570068 8199173 complement(join(2250975..2251873,2251905..2253219)) 1 NC_012964.1 Nuclear actin-related protein involved in chromatin remodeling 2253219 8199173 PAS_chr2-2_0068 Pichia pastoris GS115 Nuclear actin-related protein involved in chromatin remodeling XP_002492144.1 2250975 R 644223 CDS PAS_chr2-2_0067 254570070 8199172 join(2253482..2253528,2253578..2255090) 1 NC_012964.1 CAP (cyclase-associated protein) subunit of adenylyl cyclase complex 2255090 8199172 PAS_chr2-2_0067 Pichia pastoris GS115 CAP (cyclase-associated protein) subunit of adenylyl cyclase complex XP_002492145.1 2253482 D 644223 CDS PAS_chr2-2_0066 254570072 8199171 2255302..2256510 1 NC_012964.1 Protein chaperone involved in regulation of the HSP90 and HSP70 functions 2256510 8199171 PAS_chr2-2_0066 Pichia pastoris GS115 Protein chaperone involved in regulation of the HSP90 and HSP70 functions XP_002492146.1 2255302 D 644223 CDS PAS_chr2-2_0065 254570074 8199170 complement(2256592..2258004) 1 NC_012964.1 Plasma membrane multidrug transporter of the major facilitator superfamily 2258004 8199170 PAS_chr2-2_0065 Pichia pastoris GS115 Plasma membrane multidrug transporter of the major facilitator superfamily XP_002492147.1 2256592 R 644223 CDS PAS_chr2-2_0454 254570076 8199169 complement(2258244..2259077) 1 NC_012964.1 hypothetical protein 2259077 8199169 PAS_chr2-2_0454 Pichia pastoris GS115 hypothetical protein XP_002492148.1 2258244 R 644223 CDS PAS_chr2-2_0064 254570078 8198259 complement(2259269..2260564) 1 NC_012964.1 Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p) that may participate in DNA replication 2260564 8198259 PAS_chr2-2_0064 Pichia pastoris GS115 Protein of the SUN family (Sim1p, Uth1p, Nca3p, Sun4p) that may participate in DNA replication XP_002492149.1 2259269 R 644223 CDS PAS_chr2-2_0063 254570080 8199168 complement(2261441..2262319) 1 NC_012964.1 NADPH-dependent 1-acyl dihydroxyacetone phosphate reductase 2262319 8199168 PAS_chr2-2_0063 Pichia pastoris GS115 NADPH-dependent 1-acyl dihydroxyacetone phosphate reductase XP_002492150.1 2261441 R 644223 CDS PAS_chr2-2_0062 254570082 8199167 2262617..2263576 1 NC_012964.1 Putative protein of unknown function 2263576 8199167 PAS_chr2-2_0062 Pichia pastoris GS115 Putative protein of unknown function XP_002492151.1 2262617 D 644223 CDS PAS_chr2-2_0061 254570084 8199166 complement(2264024..2269837) 1 NC_012964.1 Essential abundant protein involved in regulation of transcription 2269837 8199166 PAS_chr2-2_0061 Pichia pastoris GS115 Essential abundant protein involved in regulation of transcription XP_002492152.1 2264024 R 644223 CDS PAS_chr2-2_0060 254570086 8199165 join(2270575..2271262,2271312..2272942) 1 NC_012964.1 6-phosphofructo-2-kinase, inhibited by phosphoenolpyruvate and sn-glycerol 3-phosphate, has negligib 2272942 8199165 PAS_chr2-2_0060 Pichia pastoris GS115 6-phosphofructo-2-kinase, inhibited by phosphoenolpyruvate and sn-glycerol 3-phosphate, has negligib XP_002492153.1 2270575 D 644223 CDS PAS_chr2-2_0059 254570088 8199164 complement(2272997..2273455) 1 NC_012964.1 Nucleoside diphosphate kinase 2273455 8199164 PAS_chr2-2_0059 Pichia pastoris GS115 Nucleoside diphosphate kinase XP_002492154.1 2272997 R 644223 CDS PAS_chr2-2_0058 254570090 8199163 2274159..2276015 1 NC_012964.1 Eukaryotic initiation factor (eIF) 2A 2276015 8199163 PAS_chr2-2_0058 Pichia pastoris GS115 Eukaryotic initiation factor (eIF) 2A XP_002492155.1 2274159 D 644223 CDS PAS_chr2-2_0057 254570092 8199162 complement(2276047..2276985) 1 NC_012964.1 Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p 2276985 8199162 PAS_chr2-2_0057 Pichia pastoris GS115 Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p XP_002492156.1 2276047 R 644223 CDS PAS_chr2-2_0056 254570094 8199161 2277198..2278472 1 NC_012964.1 hypothetical protein 2278472 8199161 PAS_chr2-2_0056 Pichia pastoris GS115 hypothetical protein XP_002492157.1 2277198 D 644223 CDS PAS_chr2-2_0055 254570096 8199160 complement(2278505..2279008) 1 NC_012964.1 Protein involved in bud-site selection 2279008 8199160 PAS_chr2-2_0055 Pichia pastoris GS115 Protein involved in bud-site selection XP_002492158.1 2278505 R 644223 CDS PAS_chr2-2_0054 254570098 8199159 2279565..2280233 1 NC_012964.1 Protein component of the large (60S) ribosomal subunit 2280233 8199159 PAS_chr2-2_0054 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit XP_002492159.1 2279565 D 644223 CDS PAS_chr2-2_0053 254570100 8199158 2280535..2281290 1 NC_012964.1 Phosphomannomutase, involved in synthesis of GDP-mannose and dolichol-phosphate-mannose 2281290 8199158 PAS_chr2-2_0053 Pichia pastoris GS115 Phosphomannomutase, involved in synthesis of GDP-mannose and dolichol-phosphate-mannose XP_002492160.1 2280535 D 644223 CDS PAS_chr2-2_0052 254570102 8199157 complement(2281322..2281942) 1 NC_012964.1 Putative protein of unknown function 2281942 8199157 PAS_chr2-2_0052 Pichia pastoris GS115 Putative protein of unknown function XP_002492161.1 2281322 R 644223 CDS PAS_chr2-2_0051 254570104 8199156 2282141..2284066 1 NC_012964.1 Putative protein of unknown function 2284066 8199156 PAS_chr2-2_0051 Pichia pastoris GS115 Putative protein of unknown function XP_002492162.1 2282141 D 644223 CDS PAS_chr2-2_0453 254570106 8199155 join(2284191..2284193,2284249..2284962) 1 NC_012964.1 hypothetical protein 2284962 8199155 PAS_chr2-2_0453 Pichia pastoris GS115 hypothetical protein XP_002492163.1 2284191 D 644223 CDS PAS_chr2-2_0050 254570108 8198258 complement(join(2285850..2288472,2288559..2288638)) 1 NC_012964.1 Component of the RSC chromatin remodeling complex 2288638 8198258 PAS_chr2-2_0050 Pichia pastoris GS115 Component of the RSC chromatin remodeling complex XP_002492164.1 2285850 R 644223 CDS PAS_chr2-2_0049 254570110 8199154 2288831..2289808 1 NC_012964.1 NAD(+)-dependent histone deacetylase 2289808 8199154 PAS_chr2-2_0049 Pichia pastoris GS115 NAD(+)-dependent histone deacetylase XP_002492165.1 2288831 D 644223 CDS PAS_chr2-2_0048 254570112 8199153 complement(2289851..2291311) 1 NC_012964.1 Dihydrolipoamide dehydrogenase 2291311 8199153 PAS_chr2-2_0048 Pichia pastoris GS115 Dihydrolipoamide dehydrogenase XP_002492166.1 2289851 R 644223 CDS PAS_chr2-2_0047 254570114 8199152 2292198..2293859 1 NC_012964.1 Putative protein with similarity to the allantoate permease (Dal5p) subfamily 2293859 8199152 PAS_chr2-2_0047 Pichia pastoris GS115 Putative protein with similarity to the allantoate permease (Dal5p) subfamily XP_002492167.1 2292198 D 644223 CDS PAS_chr2-2_0046 254570116 8199151 complement(2295022..2295996) 1 NC_012964.1 Putative protein of unknown function 2295996 8199151 PAS_chr2-2_0046 Pichia pastoris GS115 Putative protein of unknown function XP_002492168.1 2295022 R 644223 CDS PAS_chr2-2_0045 254570118 8199150 complement(2296092..2301491) 1 NC_012964.1 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA 2301491 8199150 PAS_chr2-2_0045 Pichia pastoris GS115 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA XP_002492169.1 2296092 R 644223 CDS PAS_chr2-2_0044 254570120 8199149 complement(2301781..2303067) 1 NC_012964.1 Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase) 2303067 8199149 PAS_chr2-2_0044 Pichia pastoris GS115 Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase) XP_002492170.1 2301781 R 644223 CDS PAS_chr2-2_0043 254570122 8199148 2304583..2306598 1 NC_012964.1 Homeobox transcription factor 2306598 8199148 PAS_chr2-2_0043 Pichia pastoris GS115 Homeobox transcription factor XP_002492171.1 2304583 D 644223 CDS PAS_chr2-2_0042 254570124 8199147 complement(2306666..2307844) 1 NC_012964.1 Specificity factor required for Rsp5p-dependent ubiquitination 2307844 8199147 PAS_chr2-2_0042 Pichia pastoris GS115 Specificity factor required for Rsp5p-dependent ubiquitination XP_002492172.1 2306666 R 644223 CDS PAS_chr2-2_0041 254570126 8199146 2308174..2309133 1 NC_012964.1 Serine/threonine protein kinase, subunit of the transcription factor TFIIH 2309133 8199146 PAS_chr2-2_0041 Pichia pastoris GS115 Serine/threonine protein kinase, subunit of the transcription factor TFIIH XP_002492173.1 2308174 D 644223 CDS PAS_chr2-2_0452 254570128 8199145 complement(2309153..2310379) 1 NC_012964.1 hypothetical protein 2310379 8199145 PAS_chr2-2_0452 Pichia pastoris GS115 hypothetical protein XP_002492174.1 2309153 R 644223 CDS PAS_chr2-2_0040 254570130 8198257 complement(join(2310497..2311978,2312035..2312067)) 1 NC_012964.1 Cell-cycle checkpoint serine-threonine kinase 2312067 8198257 PAS_chr2-2_0040 Pichia pastoris GS115 Cell-cycle checkpoint serine-threonine kinase XP_002492175.1 2310497 R 644223 CDS PAS_chr2-2_0451 254570132 8198184 complement(2312246..2314792) 1 NC_012964.1 hypothetical protein 2314792 8198184 PAS_chr2-2_0451 Pichia pastoris GS115 hypothetical protein XP_002492176.1 2312246 R 644223 CDS PAS_chr2-2_0039 254570134 8198256 2315946..2317592 1 NC_012964.1 Integral membrane protein involved in glycosylphosphatidylinositol (GPI) anchor synthesis 2317592 8198256 PAS_chr2-2_0039 Pichia pastoris GS115 Integral membrane protein involved in glycosylphosphatidylinositol (GPI) anchor synthesis XP_002492177.1 2315946 D 644223 CDS PAS_chr2-2_0038 254570136 8199222 complement(2317599..2320145) 1 NC_012964.1 Putative serine/threonine protein kinase 2320145 8199222 PAS_chr2-2_0038 Pichia pastoris GS115 Putative serine/threonine protein kinase XP_002492178.1 2317599 R 644223 CDS PAS_chr2-2_0037 254570138 8198994 2320602..2327225 1 NC_012964.1 AP-1 accessory protein 2327225 8198994 PAS_chr2-2_0037 Pichia pastoris GS115 AP-1 accessory protein XP_002492179.1 2320602 D 644223 CDS PAS_chr2-2_0036 254570140 8198993 complement(2327259..2329100) 1 NC_012964.1 Mannosyltransferase, involved in N-linked glycosylation 2329100 8198993 PAS_chr2-2_0036 Pichia pastoris GS115 Mannosyltransferase, involved in N-linked glycosylation XP_002492180.1 2327259 R 644223 CDS PAS_chr2-2_0035 254570142 8198992 complement(2329395..2329838) 1 NC_012964.1 hypothetical protein 2329838 8198992 PAS_chr2-2_0035 Pichia pastoris GS115 hypothetical protein XP_002492181.1 2329395 R 644223 CDS PAS_chr2-2_0034 254570144 8198991 2330016..2330909 1 NC_012964.1 Alkaline phosphatase specific for p-nitrophenyl phosphate 2330909 8198991 PAS_chr2-2_0034 Pichia pastoris GS115 Alkaline phosphatase specific for p-nitrophenyl phosphate XP_002492182.1 2330016 D 644223 CDS PAS_chr2-2_0033 254570146 8198990 2331118..2331576 1 NC_012964.1 Phosphorelay intermediate protein 2331576 8198990 PAS_chr2-2_0033 Pichia pastoris GS115 Phosphorelay intermediate protein XP_002492183.1 2331118 D 644223 CDS PAS_chr2-2_0032 254570148 8198989 complement(2332275..2334575) 1 NC_012964.1 Cytoplasmic protein of unknown function 2334575 8198989 PAS_chr2-2_0032 Pichia pastoris GS115 Cytoplasmic protein of unknown function XP_002492184.1 2332275 R 644223 CDS PAS_chr2-2_0031 254570150 8198988 2334744..2335400 1 NC_012964.1 hypothetical protein 2335400 8198988 PAS_chr2-2_0031 Pichia pastoris GS115 hypothetical protein XP_002492185.1 2334744 D 644223 CDS PAS_chr2-2_0030 254570152 8198987 complement(2335479..2337275) 1 NC_012964.1 Sorting nexin family member 2337275 8198987 PAS_chr2-2_0030 Pichia pastoris GS115 Sorting nexin family member XP_002492186.1 2335479 R 644223 CDS PAS_chr2-2_0029 254570154 8198986 complement(2337520..2337975) 1 NC_012964.1 Subunit of the ARP2/3 complex 2337975 8198986 PAS_chr2-2_0029 Pichia pastoris GS115 Subunit of the ARP2/3 complex XP_002492187.1 2337520 R 644223 CDS PAS_chr2-2_0450 254570156 8198985 complement(2338148..2338570) 1 NC_012964.1 hypothetical protein 2338570 8198985 PAS_chr2-2_0450 Pichia pastoris GS115 hypothetical protein XP_002492188.1 2338148 R 644223 CDS PAS_chr2-2_0449 254570158 8198255 complement(2338688..2339575) 1 NC_012964.1 hypothetical protein 2339575 8198255 PAS_chr2-2_0449 Pichia pastoris GS115 hypothetical protein XP_002492189.1 2338688 R 644223 CDS PAS_chr2-2_0028 254570160 8198254 2339751..2341514 1 NC_012964.1 Putative protein, acetyl coenzyme A transporter 2341514 8198254 PAS_chr2-2_0028 Pichia pastoris GS115 Putative protein, acetyl coenzyme A transporter XP_002492190.1 2339751 D 644223 CDS PAS_chr2-2_0027 254570162 8198984 complement(2341511..2342422) 1 NC_012964.1 hypothetical protein 2342422 8198984 PAS_chr2-2_0027 Pichia pastoris GS115 hypothetical protein XP_002492191.1 2341511 R 644223 CDS PAS_chr2-2_0025 254570164 8198983 2343449..2343991 1 NC_012964.1 hypothetical protein 2343991 8198983 PAS_chr2-2_0025 Pichia pastoris GS115 hypothetical protein XP_002492192.1 2343449 D 644223 CDS PAS_chr2-2_0024 254570166 8198982 complement(2344058..2347582) 1 NC_012964.1 Pyruvate carboxylase isoform, cytoplasmic enzyme that converts pyruvate to oxaloacetate 2347582 8198982 PAS_chr2-2_0024 Pichia pastoris GS115 Pyruvate carboxylase isoform, cytoplasmic enzyme that converts pyruvate to oxaloacetate XP_002492193.1 2344058 R 644223 CDS PAS_chr2-2_0023 254570168 8198981 2348913..2351300 1 NC_012964.1 Component of the Rsp5p E3-ubiquitin ligase complex 2351300 8198981 PAS_chr2-2_0023 Pichia pastoris GS115 Component of the Rsp5p E3-ubiquitin ligase complex XP_002492194.1 2348913 D 644223 CDS PAS_chr2-2_0022 254570170 8198980 2351820..2354033 1 NC_012964.1 Ubiquitin-binding component of the Rsp5p E3-ubiquitin ligase complex, functional homolog of Bul2p 2354033 8198980 PAS_chr2-2_0022 Pichia pastoris GS115 Ubiquitin-binding component of the Rsp5p E3-ubiquitin ligase complex, functional homolog of Bul2p XP_002492195.1 2351820 D 644223 CDS PAS_chr2-2_0021 254570172 8198979 complement(2354096..2355397) 1 NC_012964.1 hypothetical protein 2355397 8198979 PAS_chr2-2_0021 Pichia pastoris GS115 hypothetical protein XP_002492196.1 2354096 R 644223 CDS PAS_chr2-2_0019 254570174 8198978 2357846..2358685 1 NC_012964.1 Peroxisomal 2,4-dienoyl-CoA reductase, auxiliary enzyme of fatty acid beta-oxidation 2358685 8198978 PAS_chr2-2_0019 Pichia pastoris GS115 Peroxisomal 2,4-dienoyl-CoA reductase, auxiliary enzyme of fatty acid beta-oxidation XP_002492197.1 2357846 D 644223 CDS PAS_chr2-2_0018 254570176 8198977 complement(2358760..2360070) 1 NC_012964.1 hypothetical protein 2360070 8198977 PAS_chr2-2_0018 Pichia pastoris GS115 hypothetical protein XP_002492198.1 2358760 R 644223 CDS PAS_chr2-2_0017 254570178 8198976 complement(2360196..2362163) 1 NC_012964.1 Apyrase with wide substrate specificity 2362163 8198976 PAS_chr2-2_0017 Pichia pastoris GS115 Apyrase with wide substrate specificity XP_002492199.1 2360196 R 644223 CDS PAS_chr2-2_0448 254570180 8198975 complement(2362456..2363010) 1 NC_012964.1 hypothetical protein 2363010 8198975 PAS_chr2-2_0448 Pichia pastoris GS115 hypothetical protein XP_002492200.1 2362456 R 644223 CDS PAS_chr2-2_0016 254570182 8198253 2363444..2364832 1 NC_012964.1 Histone deacetylase 2364832 8198253 PAS_chr2-2_0016 Pichia pastoris GS115 Histone deacetylase XP_002492201.1 2363444 D 644223 CDS PAS_chr2-2_0015 254570184 8198974 complement(2365166..2367043) 1 NC_012964.1 One of several homologs of bacterial chaperone DnaJ, located in the ER lumen 2367043 8198974 PAS_chr2-2_0015 Pichia pastoris GS115 One of several homologs of bacterial chaperone DnaJ, located in the ER lumen XP_002492202.1 2365166 R 644223 CDS PAS_chr2-2_0014 254570186 8198973 complement(2367275..2369200) 1 NC_012964.1 Guanyl-nucleotide exchange factor for the small G-protein Sec4p 2369200 8198973 PAS_chr2-2_0014 Pichia pastoris GS115 Guanyl-nucleotide exchange factor for the small G-protein Sec4p XP_002492203.1 2367275 R 644223 CDS PAS_chr2-2_0013 254570188 8198972 complement(2369396..2372953) 1 NC_012964.1 Subunit of a replication-pausing checkpoint complex (Tof1p-Mrc1p-Csm3p) 2372953 8198972 PAS_chr2-2_0013 Pichia pastoris GS115 Subunit of a replication-pausing checkpoint complex (Tof1p-Mrc1p-Csm3p) XP_002492204.1 2369396 R 644223 CDS PAS_chr2-2_0012 254570190 8198971 2373440..2374234 1 NC_012964.1 hypothetical protein 2374234 8198971 PAS_chr2-2_0012 Pichia pastoris GS115 hypothetical protein XP_002492205.1 2373440 D 644223 CDS PAS_chr2-2_0011 254570192 8198970 2374399..2375646 1 NC_012964.1 hypothetical protein 2375646 8198970 PAS_chr2-2_0011 Pichia pastoris GS115 hypothetical protein XP_002492206.1 2374399 D 644223 CDS PAS_chr2-2_0010 254570194 8198969 complement(2376532..2376732) 1 NC_012964.1 hypothetical protein 2376732 8198969 PAS_chr2-2_0010 Pichia pastoris GS115 hypothetical protein XP_002492207.1 2376532 R 644223 CDS PAS_chr2-2_0009 254570196 8198968 complement(2377352..2378917) 1 NC_012964.1 Low-affinity Fe(II) transporter of the plasma membrane 2378917 8198968 PAS_chr2-2_0009 Pichia pastoris GS115 Low-affinity Fe(II) transporter of the plasma membrane XP_002492208.1 2377352 R 644223 CDS PAS_chr2-2_0007 254570198 8198967 2383164..2383403 1 NC_012964.1 hypothetical protein 2383403 8198967 PAS_chr2-2_0007 Pichia pastoris GS115 hypothetical protein XP_002492209.1 2383164 D 644223 CDS PAS_chr2-2_0006 254570200 8198966 2383500..2383799 1 NC_012964.1 hypothetical protein 2383799 8198966 PAS_chr2-2_0006 Pichia pastoris GS115 hypothetical protein XP_002492210.1 2383500 D 644223 CDS PAS_chr2-2_0005 254570202 8198965 2385053..2387233 1 NC_012964.1 Plasma membrane Mg(2+) transporter, expression and turnover are regulated by Mg(2+) concentration 2387233 8198965 PAS_chr2-2_0005 Pichia pastoris GS115 Plasma membrane Mg(2+) transporter, expression and turnover are regulated by Mg(2+) concentration XP_002492211.1 2385053 D 644223 CDS PAS_chr2-2_0004 254570204 8198964 2387684..2387989 1 NC_012964.1 hypothetical protein 2387989 8198964 PAS_chr2-2_0004 Pichia pastoris GS115 hypothetical protein XP_002492212.1 2387684 D 644223 CDS PAS_chr2-2_0003 254570206 8198963 complement(2388753..2390276) 1 NC_012964.1 hypothetical protein 2390276 8198963 PAS_chr2-2_0003 Pichia pastoris GS115 hypothetical protein XP_002492213.1 2388753 R 644223 CDS PAS_chr3_0001 254570209 8199698 join(1805..1858,2282..2812) 1 NC_012965.1 hypothetical protein 2812 8199698 PAS_chr3_0001 Pichia pastoris GS115 hypothetical protein XP_002492214.1 1805 D 644223 CDS PAS_chr3_0002 254570211 8199632 complement(4131..5918) 1 NC_012965.1 hypothetical protein 5918 8199632 PAS_chr3_0002 Pichia pastoris GS115 hypothetical protein XP_002492215.1 4131 R 644223 CDS PAS_chr3_0005 254570213 8199633 11166..12779 1 NC_012965.1 hypothetical protein 12779 8199633 PAS_chr3_0005 Pichia pastoris GS115 hypothetical protein XP_002492216.1 11166 D 644223 CDS PAS_chr3_0006 254570215 8199634 complement(14281..15345) 1 NC_012965.1 NADPH-dependent medium chain alcohol dehydrogenase 15345 8199634 PAS_chr3_0006 Pichia pastoris GS115 NADPH-dependent medium chain alcohol dehydrogenase XP_002492217.1 14281 R 644223 CDS PAS_chr3_0008 254570217 8200151 complement(join(20160..20356,20397..21095,21127..21622)) 1 NC_012965.1 hypothetical protein 21622 8200151 PAS_chr3_0008 Pichia pastoris GS115 hypothetical protein XP_002492218.1 20160 R 644223 CDS PAS_chr3_0010 254570219 8199854 join(21714..21760,21979..22421,22458..22675) 1 NC_012965.1 hypothetical protein 22675 8199854 PAS_chr3_0010 Pichia pastoris GS115 hypothetical protein XP_002492219.1 21714 D 644223 CDS PAS_chr3_1144 254570221 8199302 join(22838..22864,22900..23202) 1 NC_012965.1 hypothetical protein 23202 8199302 PAS_chr3_1144 Pichia pastoris GS115 hypothetical protein XP_002492220.1 22838 D 644223 CDS PAS_chr3_0012 254570223 8200177 join(23319..23515,23572..23735,23765..24495) 1 NC_012965.1 hypothetical protein 24495 8200177 PAS_chr3_0012 Pichia pastoris GS115 hypothetical protein XP_002492221.1 23319 D 644223 CDS PAS_chr3_0013 254570225 8199303 complement(join(25147..25504,25631..25878,26253..26417)) 1 NC_012965.1 Lectin-like protein with similarity to Flo1p, thought to be expressed and involved in flocculation 26417 8199303 PAS_chr3_0013 Pichia pastoris GS115 Lectin-like protein with similarity to Flo1p, thought to be expressed and involved in flocculation XP_002492222.1 25147 R 644223 CDS PAS_chr3_1145 254570227 8199304 complement(27503..29677) 1 NC_012965.1 hypothetical protein 29677 8199304 PAS_chr3_1145 Pichia pastoris GS115 hypothetical protein XP_002492223.1 27503 R 644223 CDS PAS_chr3_0014 254570229 8200178 complement(31546..32607) 1 NC_012965.1 Putative dihydrokaempferol 4-reductase 32607 8200178 PAS_chr3_0014 Pichia pastoris GS115 Putative dihydrokaempferol 4-reductase XP_002492224.1 31546 R 644223 CDS PAS_chr3_0015 254570231 8199305 complement(33327..35351) 1 NC_012965.1 hypothetical protein 35351 8199305 PAS_chr3_0015 Pichia pastoris GS115 hypothetical protein XP_002492225.1 33327 R 644223 CDS PAS_chr3_0016 254570233 8199306 complement(35451..36590) 1 NC_012965.1 hypothetical protein 36590 8199306 PAS_chr3_0016 Pichia pastoris GS115 hypothetical protein XP_002492226.1 35451 R 644223 CDS PAS_chr3_0017 254570235 8199307 complement(39926..40681) 1 NC_012965.1 hypothetical protein 40681 8199307 PAS_chr3_0017 Pichia pastoris GS115 hypothetical protein XP_002492227.1 39926 R 644223 CDS PAS_chr3_0018 254570237 8199308 complement(41112..42821) 1 NC_012965.1 High affinity methionine permease, integral membrane protein with 13 putative membrane-spanning regi 42821 8199308 PAS_chr3_0018 Pichia pastoris GS115 High affinity methionine permease, integral membrane protein with 13 putative membrane-spanning regi XP_002492228.1 41112 R 644223 CDS PAS_chr3_0019 254570239 8199309 complement(43577..44929) 1 NC_012965.1 Flavin-containing monooxygenase, localized to the cytoplasmic face of the ER membrane 44929 8199309 PAS_chr3_0019 Pichia pastoris GS115 Flavin-containing monooxygenase, localized to the cytoplasmic face of the ER membrane XP_002492229.1 43577 R 644223 CDS PAS_chr3_0020 254570241 8199310 complement(47774..48733) 1 NC_012965.1 Putative protein of unknown function 48733 8199310 PAS_chr3_0020 Pichia pastoris GS115 Putative protein of unknown function XP_002492230.1 47774 R 644223 CDS PAS_chr3_0022 254570243 8199311 50808..52613 1 NC_012965.1 Allantoin permease 52613 8199311 PAS_chr3_0022 Pichia pastoris GS115 Allantoin permease XP_002492231.1 50808 D 644223 CDS PAS_chr3_0023 254570245 8199312 complement(53672..55294) 1 NC_012965.1 Putative transporter, member of the sugar porter family 55294 8199312 PAS_chr3_0023 Pichia pastoris GS115 Putative transporter, member of the sugar porter family XP_002492232.1 53672 R 644223 CDS PAS_chr3_0024 254570247 8199313 complement(55790..57841) 1 NC_012965.1 Plasma membrane transporter for both urea and polyamines, expression is highly sensitive to nitrogen 57841 8199313 PAS_chr3_0024 Pichia pastoris GS115 Plasma membrane transporter for both urea and polyamines, expression is highly sensitive to nitrogen XP_002492233.1 55790 R 644223 CDS PAS_chr3_0025 254570249 8199314 complement(58856..59245) 1 NC_012965.1 hypothetical protein 59245 8199314 PAS_chr3_0025 Pichia pastoris GS115 hypothetical protein XP_002492234.1 58856 R 644223 CDS PAS_chr3_0026 254570251 8199315 complement(60021..60917) 1 NC_012965.1 hypothetical protein 60917 8199315 PAS_chr3_0026 Pichia pastoris GS115 hypothetical protein XP_002492235.1 60021 R 644223 CDS PAS_chr3_0027 254570253 8199316 61903..63876 1 NC_012965.1 hypothetical protein 63876 8199316 PAS_chr3_0027 Pichia pastoris GS115 hypothetical protein XP_002492236.1 61903 D 644223 CDS PAS_chr3_0028 254570255 8199317 complement(63929..65554) 1 NC_012965.1 Putative protein with similarity to the allantoate permease (Dal5p) subfamily of the major facilitat 65554 8199317 PAS_chr3_0028 Pichia pastoris GS115 Putative protein with similarity to the allantoate permease (Dal5p) subfamily of the major facilitat XP_002492237.1 63929 R 644223 CDS PAS_chr3_0029 254570257 8199318 65883..67502 1 NC_012965.1 hypothetical protein 67502 8199318 PAS_chr3_0029 Pichia pastoris GS115 hypothetical protein XP_002492238.1 65883 D 644223 CDS PAS_chr3_0030 254570259 8199319 complement(68405..70168) 1 NC_012965.1 hypothetical protein 70168 8199319 PAS_chr3_0030 Pichia pastoris GS115 hypothetical protein XP_002492239.1 68405 R 644223 CDS PAS_chr3_0032 254570261 8199320 complement(73945..78369) 1 NC_012965.1 hypothetical protein 78369 8199320 PAS_chr3_0032 Pichia pastoris GS115 hypothetical protein XP_002492240.1 73945 R 644223 CDS PAS_chr3_0035 254570263 8199321 80882..82606 1 NC_012965.1 hypothetical protein 82606 8199321 PAS_chr3_0035 Pichia pastoris GS115 hypothetical protein XP_002492241.1 80882 D 644223 CDS PAS_chr3_0036 254570265 8199322 complement(join(82715..83527,83575..83601)) 1 NC_012965.1 S-adenosylmethionine transporter of the mitochondrial inner membrane, member of the mitochondrial ca 83601 8199322 PAS_chr3_0036 Pichia pastoris GS115 S-adenosylmethionine transporter of the mitochondrial inner membrane, member of the mitochondrial ca XP_002492242.1 82715 R 644223 CDS PAS_chr3_0037 254570267 8199323 84001..85398 1 NC_012965.1 Cysteine desulfurase involved in iron-sulfur cluster (Fe/S) biogenesis 85398 8199323 PAS_chr3_0037 Pichia pastoris GS115 Cysteine desulfurase involved in iron-sulfur cluster (Fe/S) biogenesis XP_002492243.1 84001 D 644223 CDS PAS_chr3_0038 254570269 8199324 85601..86503 1 NC_012965.1 Nucleolar protein with similarity to large ribosomal subunit L7 proteins 86503 8199324 PAS_chr3_0038 Pichia pastoris GS115 Nucleolar protein with similarity to large ribosomal subunit L7 proteins XP_002492244.1 85601 D 644223 CDS PAS_chr3_0039 254570271 8199325 86733..87860 1 NC_012965.1 Beta-isopropylmalate dehydrogenase (IMDH), catalyzes the third step in the leucine biosynthesis path 87860 8199325 PAS_chr3_0039 Pichia pastoris GS115 Beta-isopropylmalate dehydrogenase (IMDH), catalyzes the third step in the leucine biosynthesis path XP_002492245.1 86733 D 644223 CDS PAS_chr3_0040 254570273 8199326 complement(87922..88806) 1 NC_012965.1 Mitochondrial inner membrane transporter, exports 2-oxoadipate and 2-oxoglutarate from the mitochond 88806 8199326 PAS_chr3_0040 Pichia pastoris GS115 Mitochondrial inner membrane transporter, exports 2-oxoadipate and 2-oxoglutarate from the mitochond XP_002492246.1 87922 R 644223 CDS PAS_chr3_0041 254570275 8199327 complement(89146..90312) 1 NC_012965.1 Middle sporulation-specific mitogen-activated protein kinase (MAPK) required for production of the o 90312 8199327 PAS_chr3_0041 Pichia pastoris GS115 Middle sporulation-specific mitogen-activated protein kinase (MAPK) required for production of the o XP_002492247.1 89146 R 644223 CDS PAS_chr3_0042 254570277 8199328 complement(90461..94483) 1 NC_012965.1 Myristoylated serine/threonine protein kinase involved in vacuolar protein sorting 94483 8199328 PAS_chr3_0042 Pichia pastoris GS115 Myristoylated serine/threonine protein kinase involved in vacuolar protein sorting XP_002492248.1 90461 R 644223 CDS PAS_chr3_0043 254570279 8199329 complement(94614..95999) 1 NC_012965.1 peroxisomal integral membrane protein 95999 8199329 PAS_chr3_0043 Pichia pastoris GS115 peroxisomal integral membrane protein XP_002492249.1 94614 R 644223 CDS PAS_chr3_1146 254570281 8199330 complement(97204..97995) 1 NC_012965.1 hypothetical protein 97995 8199330 PAS_chr3_1146 Pichia pastoris GS115 hypothetical protein XP_002492250.1 97204 R 644223 CDS PAS_chr3_1147 254570283 8200179 complement(98764..100146) 1 NC_012965.1 hypothetical protein 100146 8200179 PAS_chr3_1147 Pichia pastoris GS115 hypothetical protein XP_002492251.1 98764 R 644223 CDS PAS_chr3_0044 254570285 8200180 complement(100280..110206) 1 NC_012965.1 E3 ubiquitin ligase of the hect-domain class 110206 8200180 PAS_chr3_0044 Pichia pastoris GS115 E3 ubiquitin ligase of the hect-domain class XP_002492252.1 100280 R 644223 CDS PAS_chr3_0045 254570287 8199331 110554..112191 1 NC_012965.1 hypothetical protein 112191 8199331 PAS_chr3_0045 Pichia pastoris GS115 hypothetical protein XP_002492253.1 110554 D 644223 CDS PAS_chr3_0046 254570289 8199332 112368..114548 1 NC_012965.1 Protein required for S phase progression and telomere homeostasis, forms an alternative replication 114548 8199332 PAS_chr3_0046 Pichia pastoris GS115 Protein required for S phase progression and telomere homeostasis, forms an alternative replication XP_002492254.1 112368 D 644223 CDS PAS_chr3_0047 254570291 8199333 114723..117176 1 NC_012965.1 Nuclear actin-related protein involved in chromatin remodeling, component of chromatin-remodeling en 117176 8199333 PAS_chr3_0047 Pichia pastoris GS115 Nuclear actin-related protein involved in chromatin remodeling, component of chromatin-remodeling en XP_002492255.1 114723 D 644223 CDS PAS_chr3_0048 254570293 8199334 complement(117173..117853) 1 NC_012965.1 Essential t-SNARE that forms a complex with Tlg2p and Vti1p and mediates fusion of endosome-derived 117853 8199334 PAS_chr3_0048 Pichia pastoris GS115 Essential t-SNARE that forms a complex with Tlg2p and Vti1p and mediates fusion of endosome-derived XP_002492256.1 117173 R 644223 CDS PAS_chr3_0049 254570295 8199335 117945..118097 1 NC_012965.1 hypothetical protein 118097 8199335 PAS_chr3_0049 Pichia pastoris GS115 hypothetical protein XP_002492257.1 117945 D 644223 CDS PAS_chr3_0050 254570297 8199336 118548..119780 1 NC_012965.1 hypothetical protein 119780 8199336 PAS_chr3_0050 Pichia pastoris GS115 hypothetical protein XP_002492258.1 118548 D 644223 CDS PAS_chr3_0051 254570299 8199337 complement(119796..120821) 1 NC_012965.1 Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, interacts with Spt15p to act 120821 8199337 PAS_chr3_0051 Pichia pastoris GS115 Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, interacts with Spt15p to act XP_002492259.1 119796 R 644223 CDS PAS_chr3_0052 254570301 8199338 121028..121990 1 NC_012965.1 Thiamine pyrophosphokinase, phosphorylates thiamine to produce the coenzyme thiamine pyrophosphate ( 121990 8199338 PAS_chr3_0052 Pichia pastoris GS115 Thiamine pyrophosphokinase, phosphorylates thiamine to produce the coenzyme thiamine pyrophosphate ( XP_002492260.1 121028 D 644223 CDS PAS_chr3_0053 254570303 8199339 complement(122032..122976) 1 NC_012965.1 C-4 methyl sterol oxidase, catalyzes the first of three steps required to remove two C-4 methyl grou 122976 8199339 PAS_chr3_0053 Pichia pastoris GS115 C-4 methyl sterol oxidase, catalyzes the first of three steps required to remove two C-4 methyl grou XP_002492261.1 122032 R 644223 CDS PAS_chr3_0054 254570305 8199340 124224..124769 1 NC_012965.1 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl20Bp and has similari 124769 8199340 PAS_chr3_0054 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl20Bp and has similari XP_002492262.1 124224 D 644223 CDS PAS_chr3_0055 254570307 8199341 complement(124898..126043) 1 NC_012965.1 hypothetical protein 126043 8199341 PAS_chr3_0055 Pichia pastoris GS115 hypothetical protein XP_002492263.1 124898 R 644223 CDS PAS_chr3_0056 254570309 8199342 join(126206..126367,126420..126521) 1 NC_012965.1 Mitochondrial intermembrane space cysteine motif protein 126521 8199342 PAS_chr3_0056 Pichia pastoris GS115 Mitochondrial intermembrane space cysteine motif protein XP_002492264.1 126206 D 644223 CDS PAS_chr3_0057 254570311 8199343 complement(126586..127149) 1 NC_012965.1 hypothetical protein 127149 8199343 PAS_chr3_0057 Pichia pastoris GS115 hypothetical protein XP_002492265.1 126586 R 644223 CDS PAS_chr3_0058 254570313 8199344 join(127260..127304,127393..128649) 1 NC_012965.1 Oxidoreductase of the mitochondrial inner membrane, involved in cytoplasmic and mitochondrial iron h 128649 8199344 PAS_chr3_0058 Pichia pastoris GS115 Oxidoreductase of the mitochondrial inner membrane, involved in cytoplasmic and mitochondrial iron h XP_002492266.1 127260 D 644223 CDS PAS_chr3_0059 254570315 8199345 complement(join(128696..128938,128990..129052)) 1 NC_012965.1 Subunit f of the F0 sector of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily cons 129052 8199345 PAS_chr3_0059 Pichia pastoris GS115 Subunit f of the F0 sector of mitochondrial F1F0 ATP synthase, which is a large, evolutionarily cons XP_002492267.1 128696 R 644223 CDS PAS_chr3_0060 254570317 8199346 complement(129258..129518) 1 NC_012965.1 hypothetical protein 129518 8199346 PAS_chr3_0060 Pichia pastoris GS115 hypothetical protein XP_002492268.1 129258 R 644223 CDS PAS_chr3_0061 254570319 8199347 129687..132002 1 NC_012965.1 Golgi-localized RING-finger ubiquitin ligase (E3), involved in ubiquitinating and sorting membrane p 132002 8199347 PAS_chr3_0061 Pichia pastoris GS115 Golgi-localized RING-finger ubiquitin ligase (E3), involved in ubiquitinating and sorting membrane p XP_002492269.1 129687 D 644223 CDS PAS_chr3_1148 254570321 8199348 132173..132910 1 NC_012965.1 hypothetical protein 132910 8199348 PAS_chr3_1148 Pichia pastoris GS115 hypothetical protein XP_002492270.1 132173 D 644223 CDS PAS_chr3_0062 254570323 8200181 complement(132959..133921) 1 NC_012965.1 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP, which is required for nucleot 133921 8200181 PAS_chr3_0062 Pichia pastoris GS115 5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase, synthesizes PRPP, which is required for nucleot XP_002492271.1 132959 R 644223 CDS PAS_chr3_0063 254570325 8199349 complement(134238..135944) 1 NC_012965.1 Putative protein of unknown function, contains a zinc finger region and has homology to human BRAP2 135944 8199349 PAS_chr3_0063 Pichia pastoris GS115 Putative protein of unknown function, contains a zinc finger region and has homology to human BRAP2 XP_002492272.1 134238 R 644223 CDS PAS_chr3_0064 254570327 8199350 complement(136103..137641) 1 NC_012965.1 hypothetical protein 137641 8199350 PAS_chr3_0064 Pichia pastoris GS115 hypothetical protein XP_002492273.1 136103 R 644223 CDS PAS_chr3_0065 254570329 8199351 complement(137836..142920) 1 NC_012965.1 RNA binding protein with preference for single stranded tracts of U's involved in synthesis of both 142920 8199351 PAS_chr3_0065 Pichia pastoris GS115 RNA binding protein with preference for single stranded tracts of U's involved in synthesis of both XP_002492274.1 137836 R 644223 CDS PAS_chr3_0066 254570331 8199352 144270..144836 1 NC_012965.1 Peptide methionine sulfoxide reductase, reverses the oxidation of methionine residues 144836 8199352 PAS_chr3_0066 Pichia pastoris GS115 Peptide methionine sulfoxide reductase, reverses the oxidation of methionine residues XP_002492275.1 144270 D 644223 CDS PAS_chr3_0067 254570333 8199353 145294..145653 1 NC_012965.1 hypothetical protein 145653 8199353 PAS_chr3_0067 Pichia pastoris GS115 hypothetical protein XP_002492276.1 145294 D 644223 CDS PAS_chr3_0068 254570335 8199354 complement(145705..147414) 1 NC_012965.1 Component of the RSC chromatin remodeling complex 147414 8199354 PAS_chr3_0068 Pichia pastoris GS115 Component of the RSC chromatin remodeling complex XP_002492277.1 145705 R 644223 CDS PAS_chr3_0069 254570337 8199355 complement(147604..149493) 1 NC_012965.1 Carnitine acetyl-CoA transferase present in both mitochondria and peroxisomes, transfers activated a 149493 8199355 PAS_chr3_0069 Pichia pastoris GS115 Carnitine acetyl-CoA transferase present in both mitochondria and peroxisomes, transfers activated a XP_002492278.1 147604 R 644223 CDS PAS_chr3_0071 254570339 8199356 150574..152703 1 NC_012965.1 hypothetical protein 152703 8199356 PAS_chr3_0071 Pichia pastoris GS115 hypothetical protein XP_002492279.1 150574 D 644223 CDS PAS_chr3_0072 254570341 8199357 complement(152825..153724) 1 NC_012965.1 Diacylglycerol kinase, localized to the endoplasmic reticulum (ER) 153724 8199357 PAS_chr3_0072 Pichia pastoris GS115 Diacylglycerol kinase, localized to the endoplasmic reticulum (ER) XP_002492280.1 152825 R 644223 CDS PAS_chr3_1149 254570343 8199358 155104..156852 1 NC_012965.1 hypothetical protein 156852 8199358 PAS_chr3_1149 Pichia pastoris GS115 hypothetical protein XP_002492281.1 155104 D 644223 CDS PAS_chr3_1150 254570345 8200182 157093..158841 1 NC_012965.1 hypothetical protein 158841 8200182 PAS_chr3_1150 Pichia pastoris GS115 hypothetical protein XP_002492282.1 157093 D 644223 CDS PAS_chr3_0073 254570347 8200183 158991..161210 1 NC_012965.1 Glycerol 3-phosphate/dihydroxyacetone phosphate dual substrate-specific sn-1 acyltransferase of the 161210 8200183 PAS_chr3_0073 Pichia pastoris GS115 Glycerol 3-phosphate/dihydroxyacetone phosphate dual substrate-specific sn-1 acyltransferase of the XP_002492283.1 158991 D 644223 CDS PAS_chr3_1151 254570349 8199359 161385..162191 1 NC_012965.1 hypothetical protein 162191 8199359 PAS_chr3_1151 Pichia pastoris GS115 hypothetical protein XP_002492284.1 161385 D 644223 CDS PAS_chr3_0074 254570351 8200184 complement(162196..163701) 1 NC_012965.1 Protein that acts together with Uba3p to activate Rub1p before its conjugation to proteins (neddylat 163701 8200184 PAS_chr3_0074 Pichia pastoris GS115 Protein that acts together with Uba3p to activate Rub1p before its conjugation to proteins (neddylat XP_002492285.1 162196 R 644223 CDS PAS_chr3_1152 254570353 8199360 164330..165592 1 NC_012965.1 hypothetical protein 165592 8199360 PAS_chr3_1152 Pichia pastoris GS115 hypothetical protein XP_002492286.1 164330 D 644223 CDS PAS_chr3_0075 254570355 8200185 166362..168377 1 NC_012965.1 hypothetical protein 168377 8200185 PAS_chr3_0075 Pichia pastoris GS115 hypothetical protein XP_002492287.1 166362 D 644223 CDS PAS_chr3_0076 254570357 8199361 169095..170036 1 NC_012965.1 Protein of unknown function, has similarity to Pry1p and Pry3p and to the plant PR-1 class of pathog 170036 8199361 PAS_chr3_0076 Pichia pastoris GS115 Protein of unknown function, has similarity to Pry1p and Pry3p and to the plant PR-1 class of pathog XP_002492288.1 169095 D 644223 CDS PAS_chr3_0077 254570359 8199362 170254..171165 1 NC_012965.1 Alpha subunit of the translation initiation factor eIF2, involved in the identification of the start 171165 8199362 PAS_chr3_0077 Pichia pastoris GS115 Alpha subunit of the translation initiation factor eIF2, involved in the identification of the start XP_002492289.1 170254 D 644223 CDS PAS_chr3_0078 254570361 8199363 171348..172292 1 NC_012965.1 Putative protein of unknown function 172292 8199363 PAS_chr3_0078 Pichia pastoris GS115 Putative protein of unknown function XP_002492290.1 171348 D 644223 CDS PAS_chr3_0079 254570363 8199364 join(176913..176942,176995..179115) 1 NC_012965.1 Beta-adaptin, large subunit of the clathrin associated protein complex (AP-2) 179115 8199364 PAS_chr3_0079 Pichia pastoris GS115 Beta-adaptin, large subunit of the clathrin associated protein complex (AP-2) XP_002492291.1 176913 D 644223 CDS PAS_chr3_0080 254570365 8199365 complement(179154..182531) 1 NC_012965.1 Putative DNA helicase 182531 8199365 PAS_chr3_0080 Pichia pastoris GS115 Putative DNA helicase XP_002492292.1 179154 R 644223 CDS PAS_chr3_0082 254570367 8199366 183587..184897 1 NC_012965.1 Enolase I, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosph 184897 8199366 PAS_chr3_0082 Pichia pastoris GS115 Enolase I, a phosphopyruvate hydratase that catalyzes the conversion of 2-phosphoglycerate to phosph XP_002492293.1 183587 D 644223 CDS PAS_chr3_0083 254570369 8199367 complement(join(184965..186953,187046..187573)) 1 NC_012965.1 hypothetical protein 187573 8199367 PAS_chr3_0083 Pichia pastoris GS115 hypothetical protein XP_002492294.1 184965 R 644223 CDS PAS_chr3_0084 254570371 8199368 187928..190717 1 NC_012965.1 hypothetical protein 190717 8199368 PAS_chr3_0084 Pichia pastoris GS115 hypothetical protein XP_002492295.1 187928 D 644223 CDS PAS_chr3_0085 254570373 8199369 complement(190791..192482) 1 NC_012965.1 Phosphoribosylaminoimidazole carboxylase, catalyzes a step in the 'de novo' purine nucleotide biosyn 192482 8199369 PAS_chr3_0085 Pichia pastoris GS115 Phosphoribosylaminoimidazole carboxylase, catalyzes a step in the 'de novo' purine nucleotide biosyn XP_002492296.1 190791 R 644223 CDS PAS_chr3_0086 254570375 8199370 192905..193699 1 NC_012965.1 Peroxisomal 2,4-dienoyl-CoA reductase, auxiliary enzyme of fatty acid beta-oxidation 193699 8199370 PAS_chr3_0086 Pichia pastoris GS115 Peroxisomal 2,4-dienoyl-CoA reductase, auxiliary enzyme of fatty acid beta-oxidation XP_002492297.1 192905 D 644223 CDS PAS_chr3_0087 254570377 8199371 complement(193708..195093) 1 NC_012965.1 Protein involved in bud site selection during bipolar budding 195093 8199371 PAS_chr3_0087 Pichia pastoris GS115 Protein involved in bud site selection during bipolar budding XP_002492298.1 193708 R 644223 CDS PAS_chr3_0089 254570379 8199372 196924..198018 1 NC_012965.1 Putative protein of unknown function 198018 8199372 PAS_chr3_0089 Pichia pastoris GS115 Putative protein of unknown function XP_002492299.1 196924 D 644223 CDS PAS_chr3_0090 254570381 8199373 complement(198143..198472) 1 NC_012965.1 hypothetical protein 198472 8199373 PAS_chr3_0090 Pichia pastoris GS115 hypothetical protein XP_002492300.1 198143 R 644223 CDS PAS_chr3_0091 254570383 8199374 199002..199616 1 NC_012965.1 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl19Ap and has similari 199616 8199374 PAS_chr3_0091 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl19Ap and has similari XP_002492301.1 199002 D 644223 CDS PAS_chr3_0092 254570385 8199375 complement(199673..201526) 1 NC_012965.1 Transcription factor required for full Ty1 epxression, Ty1-mediated gene activation, and haploid inv 201526 8199375 PAS_chr3_0092 Pichia pastoris GS115 Transcription factor required for full Ty1 epxression, Ty1-mediated gene activation, and haploid inv XP_002492302.1 199673 R 644223 CDS PAS_chr3_0094 254570387 8199376 202296..205295 1 NC_012965.1 Constituent of 66S pre-ribosomal particles, required for large (60S) ribosomal subunit biogenesis 205295 8199376 PAS_chr3_0094 Pichia pastoris GS115 Constituent of 66S pre-ribosomal particles, required for large (60S) ribosomal subunit biogenesis XP_002492303.1 202296 D 644223 CDS PAS_chr3_0095 254570389 8199377 205824..207644 1 NC_012965.1 Phenylpyruvate decarboxylase, catalyzes decarboxylation of phenylpyruvate to phenylacetaldehyde, whi 207644 8199377 PAS_chr3_0095 Pichia pastoris GS115 Phenylpyruvate decarboxylase, catalyzes decarboxylation of phenylpyruvate to phenylacetaldehyde, whi XP_002492304.1 205824 D 644223 CDS PAS_chr3_0096 254570391 8199378 complement(207728..210391) 1 NC_012965.1 hypothetical protein 210391 8199378 PAS_chr3_0096 Pichia pastoris GS115 hypothetical protein XP_002492305.1 207728 R 644223 CDS PAS_chr3_0097 254570393 8199379 join(210605..210856,211437..211663,211720..211930) 1 NC_012965.1 Nuclear protein that binds to RNA and to Mex67p, required for export of poly(A)+ mRNA from the nucle 211930 8199379 PAS_chr3_0097 Pichia pastoris GS115 Nuclear protein that binds to RNA and to Mex67p, required for export of poly(A)+ mRNA from the nucle XP_002492306.1 210605 D 644223 CDS PAS_chr3_0098 254570395 8200423 complement(211981..212310) 1 NC_012965.1 hypothetical protein 212310 8200423 PAS_chr3_0098 Pichia pastoris GS115 hypothetical protein XP_002492307.1 211981 R 644223 CDS PAS_chr3_0099 254570397 8199380 212600..213760 1 NC_012965.1 Mitochondrial NAD+ transporter, involved in the transport of NAD+ into the mitochondria (see also YE 213760 8199380 PAS_chr3_0099 Pichia pastoris GS115 Mitochondrial NAD+ transporter, involved in the transport of NAD+ into the mitochondria (see also YE XP_002492308.1 212600 D 644223 CDS PAS_chr3_0100 254570399 8199381 213926..214834 1 NC_012965.1 Ornithine transporter of the mitochondrial inner membrane, exports ornithine from mitochondria as pa 214834 8199381 PAS_chr3_0100 Pichia pastoris GS115 Ornithine transporter of the mitochondrial inner membrane, exports ornithine from mitochondria as pa XP_002492309.1 213926 D 644223 CDS PAS_chr3_0101 254570401 8199382 complement(215484..216257) 1 NC_012965.1 hypothetical protein 216257 8199382 PAS_chr3_0101 Pichia pastoris GS115 hypothetical protein XP_002492310.1 215484 R 644223 CDS PAS_chr3_0102 254570403 8199383 complement(216374..216871) 1 NC_012965.1 hypothetical protein 216871 8199383 PAS_chr3_0102 Pichia pastoris GS115 hypothetical protein XP_002492311.1 216374 R 644223 CDS PAS_chr3_0103 254570405 8199384 complement(217129..217599) 1 NC_012965.1 hypothetical protein 217599 8199384 PAS_chr3_0103 Pichia pastoris GS115 hypothetical protein XP_002492312.1 217129 R 644223 CDS PAS_chr3_0104 254570407 8199385 complement(217832..218380) 1 NC_012965.1 hypothetical protein 218380 8199385 PAS_chr3_0104 Pichia pastoris GS115 hypothetical protein XP_002492313.1 217832 R 644223 CDS PAS_chr3_0105 254570409 8199386 218614..218937 1 NC_012965.1 hypothetical protein 218937 8199386 PAS_chr3_0105 Pichia pastoris GS115 hypothetical protein XP_002492314.1 218614 D 644223 CDS PAS_chr3_0106 254570411 8199387 complement(join(218966..219333,219448..219460)) 1 NC_012965.1 Profilin, actin-and phosphatidylinositol 4,5-bisphosphate-binding protein, involved in cytoskeleton 219460 8199387 PAS_chr3_0106 Pichia pastoris GS115 Profilin, actin-and phosphatidylinositol 4,5-bisphosphate-binding protein, involved in cytoskeleton XP_002492315.1 218966 R 644223 CDS PAS_chr3_1154 254570413 8199388 complement(219653..220942) 1 NC_012965.1 hypothetical protein 220942 8199388 PAS_chr3_1154 Pichia pastoris GS115 hypothetical protein XP_002492316.1 219653 R 644223 CDS PAS_chr3_0107 254570415 8200186 221352..222836 1 NC_012965.1 Sporulation-specific chitinase 222836 8200186 PAS_chr3_0107 Pichia pastoris GS115 Sporulation-specific chitinase XP_002492317.1 221352 D 644223 CDS PAS_chr3_0108 254570417 8199389 complement(223044..223907) 1 NC_012965.1 Protein required for Golgi localization of glycosyltransferases 223907 8199389 PAS_chr3_0108 Pichia pastoris GS115 Protein required for Golgi localization of glycosyltransferases XP_002492318.1 223044 R 644223 CDS PAS_chr3_0110 254570419 8199390 complement(226274..228238) 1 NC_012965.1 Nucleolar protein involved in pre-rRNA processing 228238 8199390 PAS_chr3_0110 Pichia pastoris GS115 Nucleolar protein involved in pre-rRNA processing XP_002492319.1 226274 R 644223 CDS PAS_chr3_0111 254570421 8199391 228617..230350 1 NC_012965.1 Putative protein of unknown function 230350 8199391 PAS_chr3_0111 Pichia pastoris GS115 Putative protein of unknown function XP_002492320.1 228617 D 644223 CDS PAS_chr3_0112 254570423 8199392 complement(230400..231746) 1 NC_012965.1 Essential serine kinase involved in cell cycle progression and processing of the 20S pre-rRNA into m 231746 8199392 PAS_chr3_0112 Pichia pastoris GS115 Essential serine kinase involved in cell cycle progression and processing of the 20S pre-rRNA into m XP_002492321.1 230400 R 644223 CDS PAS_chr3_0113 254570425 8199393 join(231895..231924,231981..232724) 1 NC_012965.1 Component of the inositol phosphorylceramide synthase 232724 8199393 PAS_chr3_0113 Pichia pastoris GS115 Component of the inositol phosphorylceramide synthase XP_002492322.1 231895 D 644223 CDS PAS_chr3_0114 254570427 8199394 232965..233732 1 NC_012965.1 hypothetical protein 233732 8199394 PAS_chr3_0114 Pichia pastoris GS115 hypothetical protein XP_002492323.1 232965 D 644223 CDS PAS_chr3_0115 254570429 8199395 complement(join(233812..234383,234556..236212)) 1 NC_012965.1 Transcriptional repressor and activator 236212 8199395 PAS_chr3_0115 Pichia pastoris GS115 Transcriptional repressor and activator XP_002492324.1 233812 R 644223 CDS PAS_chr3_0116 254570431 8199396 complement(236857..238212) 1 NC_012965.1 Protein of the mitochondrial inner membrane that functions as an ATP-dependent chaperone, required f 238212 8199396 PAS_chr3_0116 Pichia pastoris GS115 Protein of the mitochondrial inner membrane that functions as an ATP-dependent chaperone, required f XP_002492325.1 236857 R 644223 CDS PAS_chr3_0117 254570433 8199397 238466..242308 1 NC_012965.1 Ubiquitin-specific protease that removes ubiquitin from ubiquitinated proteins, cleaves at the C ter 242308 8199397 PAS_chr3_0117 Pichia pastoris GS115 Ubiquitin-specific protease that removes ubiquitin from ubiquitinated proteins, cleaves at the C ter XP_002492326.1 238466 D 644223 CDS PAS_chr3_0118 254570435 8199398 complement(242340..244223) 1 NC_012965.1 One of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC) 244223 8199398 PAS_chr3_0118 Pichia pastoris GS115 One of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC) XP_002492327.1 242340 R 644223 CDS PAS_chr3_0119 254570437 8199399 complement(244342..245499) 1 NC_012965.1 Putative protein of unknown function 245499 8199399 PAS_chr3_0119 Pichia pastoris GS115 Putative protein of unknown function XP_002492328.1 244342 R 644223 CDS PAS_chr3_0120 254570439 8199400 245785..246903 1 NC_012965.1 Integral membrane protein of the endoplasmic reticulum, required for normal content of cell wall bet 246903 8199400 PAS_chr3_0120 Pichia pastoris GS115 Integral membrane protein of the endoplasmic reticulum, required for normal content of cell wall bet XP_002492329.1 245785 D 644223 CDS PAS_chr3_0121 254570441 8199401 complement(247081..247374) 1 NC_012965.1 hypothetical protein 247374 8199401 PAS_chr3_0121 Pichia pastoris GS115 hypothetical protein XP_002492330.1 247081 R 644223 CDS PAS_chr3_0122 254570443 8199402 247583..248071 1 NC_012965.1 Small subunit of the clathrin-associated adaptor complex AP-3, which is involved in vacuolar protein 248071 8199402 PAS_chr3_0122 Pichia pastoris GS115 Small subunit of the clathrin-associated adaptor complex AP-3, which is involved in vacuolar protein XP_002492331.1 247583 D 644223 CDS PAS_chr3_0123 254570445 8199403 complement(248123..248575) 1 NC_012965.1 Mitochondrial protein required for assembly of ubiquinol cytochrome-c reductase complex (cytochrome 248575 8199403 PAS_chr3_0123 Pichia pastoris GS115 Mitochondrial protein required for assembly of ubiquinol cytochrome-c reductase complex (cytochrome XP_002492332.1 248123 R 644223 CDS PAS_chr3_0124 254570447 8199404 248830..250308 1 NC_012965.1 Squalene epoxidase, catalyzes the epoxidation of squalene to 2,3-oxidosqualene 250308 8199404 PAS_chr3_0124 Pichia pastoris GS115 Squalene epoxidase, catalyzes the epoxidation of squalene to 2,3-oxidosqualene XP_002492333.1 248830 D 644223 CDS PAS_chr3_0125 254570449 8199405 250557..252119 1 NC_012965.1 Putative protein of unknown function 252119 8199405 PAS_chr3_0125 Pichia pastoris GS115 Putative protein of unknown function XP_002492334.1 250557 D 644223 CDS PAS_chr3_0126 254570451 8199406 252521..253027 1 NC_012965.1 hypothetical protein 253027 8199406 PAS_chr3_0126 Pichia pastoris GS115 hypothetical protein XP_002492335.1 252521 D 644223 CDS PAS_chr3_0127 254570453 8199407 complement(253092..255248) 1 NC_012965.1 Protein kinase with similarityto serine/threonine protein kinase Ypk1p 255248 8199407 PAS_chr3_0127 Pichia pastoris GS115 Protein kinase with similarityto serine/threonine protein kinase Ypk1p XP_002492336.1 253092 R 644223 CDS PAS_chr3_0129 254570455 8199408 261874..265197 1 NC_012965.1 SUMO/Smt3 ligase that promotes the attachment of sumo (Smt3p 265197 8199408 PAS_chr3_0129 Pichia pastoris GS115 SUMO/Smt3 ligase that promotes the attachment of sumo (Smt3p XP_002492337.1 261874 D 644223 CDS PAS_chr3_0130 254570457 8199409 complement(265199..265921) 1 NC_012965.1 Farnesyl cysteine-carboxyl methyltransferase, mediates the carboxyl methylation step during C-termin 265921 8199409 PAS_chr3_0130 Pichia pastoris GS115 Farnesyl cysteine-carboxyl methyltransferase, mediates the carboxyl methylation step during C-termin XP_002492338.1 265199 R 644223 CDS PAS_chr3_0131 254570459 8199410 266154..266723 1 NC_012965.1 Essential nucleolar protein that is a component of the SSU (small subunit) processome involved in th 266723 8199410 PAS_chr3_0131 Pichia pastoris GS115 Essential nucleolar protein that is a component of the SSU (small subunit) processome involved in th XP_002492339.1 266154 D 644223 CDS PAS_chr3_0132 254570461 8199411 266992..268938 1 NC_012965.1 hypothetical protein 268938 8199411 PAS_chr3_0132 Pichia pastoris GS115 hypothetical protein XP_002492340.1 266992 D 644223 CDS PAS_chr3_0133 254570463 8199412 269861..270790 1 NC_012965.1 GTP-binding protein of the ras superfamily required for bud site selection 270790 8199412 PAS_chr3_0133 Pichia pastoris GS115 GTP-binding protein of the ras superfamily required for bud site selection XP_002492341.1 269861 D 644223 CDS PAS_chr3_0134 254570465 8199413 complement(join(271593..272858,272912..273898)) 1 NC_012965.1 hypothetical protein 273898 8199413 PAS_chr3_0134 Pichia pastoris GS115 hypothetical protein XP_002492342.1 271593 R 644223 CDS PAS_chr3_0135 254570467 8199414 274722..275882 1 NC_012965.1 Basic leucine zipper (bZIP) transcription factor of the ATF/CREB family, activates transcription of 275882 8199414 PAS_chr3_0135 Pichia pastoris GS115 Basic leucine zipper (bZIP) transcription factor of the ATF/CREB family, activates transcription of XP_002492343.1 274722 D 644223 CDS PAS_chr3_0136 254570469 8199415 complement(275891..277186) 1 NC_012965.1 Component of the ESCRT-I complex, which is involved in ubiquitin-dependent sorting of proteins into 277186 8199415 PAS_chr3_0136 Pichia pastoris GS115 Component of the ESCRT-I complex, which is involved in ubiquitin-dependent sorting of proteins into XP_002492344.1 275891 R 644223 CDS PAS_chr3_0137 254570471 8199416 join(277352..277359,277565..277694) 1 NC_012965.1 Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex 277694 8199416 PAS_chr3_0137 Pichia pastoris GS115 Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex XP_002492345.1 277352 D 644223 CDS PAS_chr3_0138 254570473 8199417 278151..279248 1 NC_012965.1 hypothetical protein 279248 8199417 PAS_chr3_0138 Pichia pastoris GS115 hypothetical protein XP_002492346.1 278151 D 644223 CDS PAS_chr3_0139 254570475 8199418 279350..280375 1 NC_012965.1 hypothetical protein 280375 8199418 PAS_chr3_0139 Pichia pastoris GS115 hypothetical protein XP_002492347.1 279350 D 644223 CDS PAS_chr3_0140 254570477 8199419 280750..281607 1 NC_012965.1 ER localized, heme-binding peroxidase involved in the degradation of heme 281607 8199419 PAS_chr3_0140 Pichia pastoris GS115 ER localized, heme-binding peroxidase involved in the degradation of heme XP_002492348.1 280750 D 644223 CDS PAS_chr3_1155 254570479 8199420 281879..282568 1 NC_012965.1 hypothetical protein 282568 8199420 PAS_chr3_1155 Pichia pastoris GS115 hypothetical protein XP_002492349.1 281879 D 644223 CDS PAS_chr3_0141 254570481 8200187 complement(282658..284424) 1 NC_012965.1 High-affinity inorganic phosphate (Pi) transporter and low-affinity manganese transporter 284424 8200187 PAS_chr3_0141 Pichia pastoris GS115 High-affinity inorganic phosphate (Pi) transporter and low-affinity manganese transporter XP_002492350.1 282658 R 644223 CDS PAS_chr3_0142 254570483 8199421 complement(286223..287224) 1 NC_012965.1 Putative protein of unknown function 287224 8199421 PAS_chr3_0142 Pichia pastoris GS115 Putative protein of unknown function XP_002492351.1 286223 R 644223 CDS PAS_chr3_0143 254570485 8199422 complement(287971..288585) 1 NC_012965.1 Secretory vesicle-associated Rab GTPase essential for exocytosis 288585 8199422 PAS_chr3_0143 Pichia pastoris GS115 Secretory vesicle-associated Rab GTPase essential for exocytosis XP_002492352.1 287971 R 644223 CDS PAS_chr3_0144 254570487 8199423 289030..290799 1 NC_012965.1 Beta subunit of cytoplasmic phenylalanyl-tRNA synthetase, forms a tetramer with Frs2p to generate ac 290799 8199423 PAS_chr3_0144 Pichia pastoris GS115 Beta subunit of cytoplasmic phenylalanyl-tRNA synthetase, forms a tetramer with Frs2p to generate ac XP_002492353.1 289030 D 644223 CDS PAS_chr3_0146 254570489 8199424 294649..295860 1 NC_012965.1 hypothetical protein 295860 8199424 PAS_chr3_0146 Pichia pastoris GS115 hypothetical protein XP_002492354.1 294649 D 644223 CDS PAS_chr3_0147 254570491 8199425 complement(295960..298572) 1 NC_012965.1 Essential DNA-binding protein specific to single-stranded yeast telomeric DNA repeats, required for 298572 8199425 PAS_chr3_0147 Pichia pastoris GS115 Essential DNA-binding protein specific to single-stranded yeast telomeric DNA repeats, required for XP_002492355.1 295960 R 644223 CDS PAS_chr3_0148 254570493 8199426 298739..303589 1 NC_012965.1 Glucose-repressible protein kinase involved in signal transduction during cell proliferation in resp 303589 8199426 PAS_chr3_0148 Pichia pastoris GS115 Glucose-repressible protein kinase involved in signal transduction during cell proliferation in resp XP_002492356.1 298739 D 644223 CDS PAS_chr3_0149 254570495 8199427 complement(303597..304907) 1 NC_012965.1 hypothetical protein 304907 8199427 PAS_chr3_0149 Pichia pastoris GS115 hypothetical protein XP_002492357.1 303597 R 644223 CDS PAS_chr3_0150 254570497 8199428 complement(305816..306415) 1 NC_012965.1 GTP-binding protein of the rho subfamily of Ras-like proteins, involved in establishment of cell pol 306415 8199428 PAS_chr3_0150 Pichia pastoris GS115 GTP-binding protein of the rho subfamily of Ras-like proteins, involved in establishment of cell pol XP_002492358.1 305816 R 644223 CDS PAS_chr3_0152 254570499 8199429 307950..308396 1 NC_012965.1 Subunit of the RNA polymerase II mediator complex 308396 8199429 PAS_chr3_0152 Pichia pastoris GS115 Subunit of the RNA polymerase II mediator complex XP_002492359.1 307950 D 644223 CDS PAS_chr3_1156 254570501 8199430 308573..308962 1 NC_012965.1 hypothetical protein 308962 8199430 PAS_chr3_1156 Pichia pastoris GS115 hypothetical protein XP_002492360.1 308573 D 644223 CDS PAS_chr3_0154 254570503 8200188 complement(311262..312863) 1 NC_012965.1 Putative protein of unknown function 312863 8200188 PAS_chr3_0154 Pichia pastoris GS115 Putative protein of unknown function XP_002492361.1 311262 R 644223 CDS PAS_chr3_0156 254570505 8199431 315713..316444 1 NC_012965.1 Diaminohydroxyphoshoribosylaminopyrimidine deaminase 316444 8199431 PAS_chr3_0156 Pichia pastoris GS115 Diaminohydroxyphoshoribosylaminopyrimidine deaminase XP_002492362.1 315713 D 644223 CDS PAS_chr3_0157 254570507 8199432 complement(316473..317117) 1 NC_012965.1 RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III 317117 8199432 PAS_chr3_0157 Pichia pastoris GS115 RNA polymerase subunit ABC27, common to RNA polymerases I, II, and III XP_002492363.1 316473 R 644223 CDS PAS_chr3_0158 254570509 8199433 complement(317242..320016) 1 NC_012965.1 Putative protein of unknown function 320016 8199433 PAS_chr3_0158 Pichia pastoris GS115 Putative protein of unknown function XP_002492364.1 317242 R 644223 CDS PAS_chr3_0159 254570511 8199434 complement(320149..320928) 1 NC_012965.1 hypothetical protein 320928 8199434 PAS_chr3_0159 Pichia pastoris GS115 hypothetical protein XP_002492365.1 320149 R 644223 CDS PAS_chr3_0160 254570513 8199435 321045..321926 1 NC_012965.1 Nucleolar protein, constituent of 66S pre-ribosomal particles 321926 8199435 PAS_chr3_0160 Pichia pastoris GS115 Nucleolar protein, constituent of 66S pre-ribosomal particles XP_002492366.1 321045 D 644223 CDS PAS_chr3_0161 254570515 8199436 complement(join(322043..322198,322267..322314)) 1 NC_012965.1 hypothetical protein 322314 8199436 PAS_chr3_0161 Pichia pastoris GS115 hypothetical protein XP_002492367.1 322043 R 644223 CDS PAS_chr3_0162 254570517 8199437 322564..324486 1 NC_012965.1 Component of a membrane-bound complex containing the Tor2p kinase and other proteins 324486 8199437 PAS_chr3_0162 Pichia pastoris GS115 Component of a membrane-bound complex containing the Tor2p kinase and other proteins XP_002492368.1 322564 D 644223 CDS PAS_chr3_0164 254570519 8199438 337216..337944 1 NC_012965.1 hypothetical protein 337944 8199438 PAS_chr3_0164 Pichia pastoris GS115 hypothetical protein XP_002492369.1 337216 D 644223 CDS PAS_chr3_0165 254570521 8199439 338088..339311 1 NC_012965.1 Cytoplasmic tryptophanyl-tRNA synthetase, aminoacylates tryptophanyl-tRNA 339311 8199439 PAS_chr3_0165 Pichia pastoris GS115 Cytoplasmic tryptophanyl-tRNA synthetase, aminoacylates tryptophanyl-tRNA XP_002492370.1 338088 D 644223 CDS PAS_chr3_0166 254570523 8199440 complement(339375..341348) 1 NC_012965.1 Arginyl-tRNA synthetase 341348 8199440 PAS_chr3_0166 Pichia pastoris GS115 Arginyl-tRNA synthetase XP_002492371.1 339375 R 644223 CDS PAS_chr3_1157 254570525 8199441 complement(join(341523..343162,343255..343303)) 1 NC_012965.1 hypothetical protein 343303 8199441 PAS_chr3_1157 Pichia pastoris GS115 hypothetical protein XP_002492372.1 341523 R 644223 CDS PAS_chr3_0167 254570527 8200189 complement(join(344017..344594,344651..344693)) 1 NC_012965.1 3,4-dihydroxy-2-butanone-4-phosphate synthase (DHBP synthase), required for riboflavin biosynthesis 344693 8200189 PAS_chr3_0167 Pichia pastoris GS115 3,4-dihydroxy-2-butanone-4-phosphate synthase (DHBP synthase), required for riboflavin biosynthesis XP_002492373.1 344017 R 644223 CDS PAS_chr3_0168 254570529 8199442 345343..345981 1 NC_012965.1 Cytoplasmic and vacuolar membrane protein involved in late endosome to vacuole transport 345981 8199442 PAS_chr3_0168 Pichia pastoris GS115 Cytoplasmic and vacuolar membrane protein involved in late endosome to vacuole transport XP_002492374.1 345343 D 644223 CDS PAS_chr3_0169 254570531 8199443 complement(346003..346947) 1 NC_012965.1 O-methyltransferase, catalyzes two different O-methylation steps in ubiquinone (Coenzyme Q) biosynth 346947 8199443 PAS_chr3_0169 Pichia pastoris GS115 O-methyltransferase, catalyzes two different O-methylation steps in ubiquinone (Coenzyme Q) biosynth XP_002492375.1 346003 R 644223 CDS PAS_chr3_1158 254570533 8199444 complement(347027..349222) 1 NC_012965.1 hypothetical protein 349222 8199444 PAS_chr3_1158 Pichia pastoris GS115 hypothetical protein XP_002492376.1 347027 R 644223 CDS PAS_chr3_0170 254570535 8200190 complement(join(349336..349759,349813..349838)) 1 NC_012965.1 Co-chaperone that binds to Hsp82p and activates its ATPase activity 349838 8200190 PAS_chr3_0170 Pichia pastoris GS115 Co-chaperone that binds to Hsp82p and activates its ATPase activity XP_002492377.1 349336 R 644223 CDS PAS_chr3_0171 254570537 8199445 350370..350960 1 NC_012965.1 hypothetical protein 350960 8199445 PAS_chr3_0171 Pichia pastoris GS115 hypothetical protein XP_002492378.1 350370 D 644223 CDS PAS_chr3_0172 254570539 8199446 351277..352755 1 NC_012965.1 Putative protein of unknown function 352755 8199446 PAS_chr3_0172 Pichia pastoris GS115 Putative protein of unknown function XP_002492379.1 351277 D 644223 CDS PAS_chr3_0173 254570541 8199447 353048..356629 1 NC_012965.1 Protein required for establishment and maintenance of sister chromatid condensation and cohesion 356629 8199447 PAS_chr3_0173 Pichia pastoris GS115 Protein required for establishment and maintenance of sister chromatid condensation and cohesion XP_002492380.1 353048 D 644223 CDS PAS_chr3_0174 254570543 8199448 complement(join(356732..358395,358607..358691)) 1 NC_012965.1 Essential subunit of the histone deacetylase Rpd3S complex 358691 8199448 PAS_chr3_0174 Pichia pastoris GS115 Essential subunit of the histone deacetylase Rpd3S complex XP_002492381.1 356732 R 644223 CDS PAS_chr3_0175 254570545 8199449 complement(358902..360005) 1 NC_012965.1 hypothetical protein 360005 8199449 PAS_chr3_0175 Pichia pastoris GS115 hypothetical protein XP_002492382.1 358902 R 644223 CDS PAS_chr3_0176 254570547 8199450 360326..361612 1 NC_012965.1 Mitochondrial ornithine acetyltransferase 361612 8199450 PAS_chr3_0176 Pichia pastoris GS115 Mitochondrial ornithine acetyltransferase XP_002492383.1 360326 D 644223 CDS PAS_chr3_1159 254570549 8199451 361763..363502 1 NC_012965.1 hypothetical protein 363502 8199451 PAS_chr3_1159 Pichia pastoris GS115 hypothetical protein XP_002492384.1 361763 D 644223 CDS PAS_chr3_1160 254570551 8200191 363792..364988 1 NC_012965.1 hypothetical protein 364988 8200191 PAS_chr3_1160 Pichia pastoris GS115 hypothetical protein XP_002492385.1 363792 D 644223 CDS PAS_chr3_0177 254570553 8200192 complement(365003..365884) 1 NC_012965.1 Mitochondrial inner membrane citrate transporter 365884 8200192 PAS_chr3_0177 Pichia pastoris GS115 Mitochondrial inner membrane citrate transporter XP_002492386.1 365003 R 644223 CDS PAS_chr3_0178 254570555 8199452 complement(366120..367298) 1 NC_012965.1 TFIIE large subunit 367298 8199452 PAS_chr3_0178 Pichia pastoris GS115 TFIIE large subunit XP_002492387.1 366120 R 644223 CDS PAS_chr3_0179 254570557 8199453 367451..368983 1 NC_012965.1 Glucosidase II beta subunit 368983 8199453 PAS_chr3_0179 Pichia pastoris GS115 Glucosidase II beta subunit XP_002492388.1 367451 D 644223 CDS PAS_chr3_0180 254570559 8199454 369087..370631 1 NC_012965.1 hypothetical protein 370631 8199454 PAS_chr3_0180 Pichia pastoris GS115 hypothetical protein XP_002492389.1 369087 D 644223 CDS PAS_chr3_0181 254570561 8199455 371224..373119 1 NC_012965.1 Mitochondrial malic enzyme 373119 8199455 PAS_chr3_0181 Pichia pastoris GS115 Mitochondrial malic enzyme XP_002492390.1 371224 D 644223 CDS PAS_chr3_0182 254570563 8199456 complement(373171..374793) 1 NC_012965.1 Dicarboxylic amino acid permease 374793 8199456 PAS_chr3_0182 Pichia pastoris GS115 Dicarboxylic amino acid permease XP_002492391.1 373171 R 644223 CDS PAS_chr3_0183 254570565 8199457 375658..377061 1 NC_012965.1 hypothetical protein 377061 8199457 PAS_chr3_0183 Pichia pastoris GS115 hypothetical protein XP_002492392.1 375658 D 644223 CDS PAS_chr3_0184 254570567 8199857 complement(join(377187..377362,377467..378769)) 1 NC_012965.1 1,3-beta-glucanosyltransferase 378769 8199857 PAS_chr3_0184 Pichia pastoris GS115 1,3-beta-glucanosyltransferase XP_002492393.1 377187 R 644223 CDS PAS_chr3_0185 254570569 8199936 complement(379205..380080) 1 NC_012965.1 hypothetical protein 380080 8199936 PAS_chr3_0185 Pichia pastoris GS115 hypothetical protein XP_002492394.1 379205 R 644223 CDS PAS_chr3_0186 254570571 8199937 380477..381742 1 NC_012965.1 D-serine dehydratase (aka D-serine ammonia-lyase) 381742 8199937 PAS_chr3_0186 Pichia pastoris GS115 D-serine dehydratase (aka D-serine ammonia-lyase) XP_002492395.1 380477 D 644223 CDS PAS_chr3_0187 254570573 8199938 complement(join(381786..382044,382090..382148)) 1 NC_012965.1 Putative protein of unknown function 382148 8199938 PAS_chr3_0187 Pichia pastoris GS115 Putative protein of unknown function XP_002492396.1 381786 R 644223 CDS PAS_chr3_0188 254570575 8199939 complement(382287..383969) 1 NC_012965.1 Major of three pyruvate decarboxylase isozymes 383969 8199939 PAS_chr3_0188 Pichia pastoris GS115 Major of three pyruvate decarboxylase isozymes XP_002492397.1 382287 R 644223 CDS PAS_chr3_0189 254570577 8199940 complement(384516..386051) 1 NC_012965.1 Peripheral peroxisomal membrane peroxin 386051 8199940 PAS_chr3_0189 Pichia pastoris GS115 Peripheral peroxisomal membrane peroxin XP_002492398.1 384516 R 644223 CDS PAS_chr3_0191 254570579 8199941 join(387257..387430,387508..387831) 1 NC_012965.1 hypothetical protein 387831 8199941 PAS_chr3_0191 Pichia pastoris GS115 hypothetical protein XP_002492399.1 387257 D 644223 CDS PAS_chr3_0192 254570581 8199942 388215..389252 1 NC_012965.1 hypothetical protein 389252 8199942 PAS_chr3_0192 Pichia pastoris GS115 hypothetical protein XP_002492400.1 388215 D 644223 CDS PAS_chr3_0193 254570583 8199943 complement(389326..389928) 1 NC_012965.1 hypothetical protein 389928 8199943 PAS_chr3_0193 Pichia pastoris GS115 hypothetical protein XP_002492401.1 389326 R 644223 CDS PAS_chr3_0194 254570585 8199944 join(390558..390561,390760..391076) 1 NC_012965.1 Protein component of the large (60S) ribosomal subunit, identical to Rpl42Ap and has similarity to r 391076 8199944 PAS_chr3_0194 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit, identical to Rpl42Ap and has similarity to r XP_002492402.1 390558 D 644223 CDS PAS_chr3_0195 254570587 8199945 391466..393436 1 NC_012965.1 Serine/threonine protein kinase 393436 8199945 PAS_chr3_0195 Pichia pastoris GS115 Serine/threonine protein kinase XP_002492403.1 391466 D 644223 CDS PAS_chr3_0196 254570589 8199946 complement(393932..394147) 1 NC_012965.1 hypothetical protein 394147 8199946 PAS_chr3_0196 Pichia pastoris GS115 hypothetical protein XP_002492404.1 393932 R 644223 CDS PAS_chr3_0197 254570591 8199947 394340..395281 1 NC_012965.1 hypothetical protein 395281 8199947 PAS_chr3_0197 Pichia pastoris GS115 hypothetical protein XP_002492405.1 394340 D 644223 CDS PAS_chr3_0198 254570593 8199948 complement(395294..396163) 1 NC_012965.1 Diacylglycerol pyrophosphate (DGPP) phosphatase 396163 8199948 PAS_chr3_0198 Pichia pastoris GS115 Diacylglycerol pyrophosphate (DGPP) phosphatase XP_002492406.1 395294 R 644223 CDS PAS_chr3_0199 254570595 8199949 396296..397885 1 NC_012965.1 Putative protein of unknown function with similarity to asparagine synthetases 397885 8199949 PAS_chr3_0199 Pichia pastoris GS115 Putative protein of unknown function with similarity to asparagine synthetases XP_002492407.1 396296 D 644223 CDS PAS_chr3_0200 254570597 8199950 complement(397919..398737) 1 NC_012965.1 Sumoylated protein of unknown function 398737 8199950 PAS_chr3_0200 Pichia pastoris GS115 Sumoylated protein of unknown function XP_002492408.1 397919 R 644223 CDS PAS_chr3_0202 254570599 8199951 401425..402888 1 NC_012965.1 Protein involved in 5.8S rRNA processing 402888 8199951 PAS_chr3_0202 Pichia pastoris GS115 Protein involved in 5.8S rRNA processing XP_002492409.1 401425 D 644223 CDS PAS_chr3_0203 254570601 8199952 complement(402910..404733) 1 NC_012965.1 Guanine nucleotide exchange factor 404733 8199952 PAS_chr3_0203 Pichia pastoris GS115 Guanine nucleotide exchange factor XP_002492410.1 402910 R 644223 CDS PAS_chr3_0204 254570603 8199953 405076..406047 1 NC_012965.1 Protein required for pre-rRNA processing and 40S ribosomal subunit assembly 406047 8199953 PAS_chr3_0204 Pichia pastoris GS115 Protein required for pre-rRNA processing and 40S ribosomal subunit assembly XP_002492411.1 405076 D 644223 CDS PAS_chr3_0205 254570605 8199954 complement(join(406092..406845,406901..408645)) 1 NC_012965.1 Chromatin-associated protein 408645 8199954 PAS_chr3_0205 Pichia pastoris GS115 Chromatin-associated protein XP_002492412.1 406092 R 644223 CDS PAS_chr3_0206 254570607 8199955 409001..409882 1 NC_012965.1 hypothetical protein 409882 8199955 PAS_chr3_0206 Pichia pastoris GS115 hypothetical protein XP_002492413.1 409001 D 644223 CDS PAS_chr3_0207 254570609 8199956 410099..411685 1 NC_012965.1 Protein involved in pre-rRNA processing 411685 8199956 PAS_chr3_0207 Pichia pastoris GS115 Protein involved in pre-rRNA processing XP_002492414.1 410099 D 644223 CDS PAS_chr3_0208 254570611 8199957 complement(411805..412455) 1 NC_012965.1 hypothetical protein 412455 8199957 PAS_chr3_0208 Pichia pastoris GS115 hypothetical protein XP_002492415.1 411805 R 644223 CDS PAS_chr3_0209 254570613 8199958 complement(412934..414088) 1 NC_012965.1 Cytosolic protein required for sporulation 414088 8199958 PAS_chr3_0209 Pichia pastoris GS115 Cytosolic protein required for sporulation XP_002492416.1 412934 R 644223 CDS PAS_chr3_1161 254570615 8199959 414276..416783 1 NC_012965.1 hypothetical protein 416783 8199959 PAS_chr3_1161 Pichia pastoris GS115 hypothetical protein XP_002492417.1 414276 D 644223 CDS PAS_chr3_0210 254570617 8200193 417461..419890 1 NC_012965.1 Subunit of the vacuole fusion and protein sorting HOPS complex and the CORVET tethering complex 419890 8200193 PAS_chr3_0210 Pichia pastoris GS115 Subunit of the vacuole fusion and protein sorting HOPS complex and the CORVET tethering complex XP_002492418.1 417461 D 644223 CDS PAS_chr3_0211 254570619 8199960 complement(419912..421165) 1 NC_012965.1 Outer kinetochore protein required for chromosome stability 421165 8199960 PAS_chr3_0211 Pichia pastoris GS115 Outer kinetochore protein required for chromosome stability XP_002492419.1 419912 R 644223 CDS PAS_chr3_0212 254570621 8199961 421295..423256 1 NC_012965.1 Nucleolar protein 423256 8199961 PAS_chr3_0212 Pichia pastoris GS115 Nucleolar protein XP_002492420.1 421295 D 644223 CDS PAS_chr3_0213 254570623 8199962 complement(423308..424990) 1 NC_012965.1 tRNA(Ser) Um(44) 2'-O-methyltransferase 424990 8199962 PAS_chr3_0213 Pichia pastoris GS115 tRNA(Ser) Um(44) 2'-O-methyltransferase XP_002492421.1 423308 R 644223 CDS PAS_chr3_0214 254570625 8199963 join(425378..425391,425528..426386) 1 NC_012965.1 Cyclin-dependent kinase 426386 8199963 PAS_chr3_0214 Pichia pastoris GS115 Cyclin-dependent kinase XP_002492422.1 425378 D 644223 CDS PAS_chr3_0215 254570627 8199964 427436..428578 1 NC_012965.1 Alpha1,2-mannosyltransferase 428578 8199964 PAS_chr3_0215 Pichia pastoris GS115 Alpha1,2-mannosyltransferase XP_002492423.1 427436 D 644223 CDS PAS_chr3_1162 254570629 8199965 428902..430113 1 NC_012965.1 hypothetical protein 430113 8199965 PAS_chr3_1162 Pichia pastoris GS115 hypothetical protein XP_002492424.1 428902 D 644223 CDS PAS_chr3_1163 254570631 8200194 430272..433010 1 NC_012965.1 hypothetical protein 433010 8200194 PAS_chr3_1163 Pichia pastoris GS115 hypothetical protein XP_002492425.1 430272 D 644223 CDS PAS_chr3_0216 254570633 8200195 433442..434689 1 NC_012965.1 Arginosuccinate synthetase 434689 8200195 PAS_chr3_0216 Pichia pastoris GS115 Arginosuccinate synthetase XP_002492426.1 433442 D 644223 CDS PAS_chr3_0217 254570635 8199966 complement(434738..435685) 1 NC_012965.1 Type 2A-related serine-threonine phosphatase 435685 8199966 PAS_chr3_0217 Pichia pastoris GS115 Type 2A-related serine-threonine phosphatase XP_002492427.1 434738 R 644223 CDS PAS_chr3_0218 254570637 8199967 436426..437808 1 NC_012965.1 Diacylglycerol acyltransferase 437808 8199967 PAS_chr3_0218 Pichia pastoris GS115 Diacylglycerol acyltransferase XP_002492428.1 436426 D 644223 CDS PAS_chr3_0219 254570639 8199968 437955..440363 1 NC_012965.1 DNA helicase and DNA-dependent ATPase 440363 8199968 PAS_chr3_0219 Pichia pastoris GS115 DNA helicase and DNA-dependent ATPase XP_002492429.1 437955 D 644223 CDS PAS_chr3_0220 254570641 8199969 complement(440370..444494) 1 NC_012965.1 Mitogen-activated protein (MAP) kinase kinase kinase 444494 8199969 PAS_chr3_0220 Pichia pastoris GS115 Mitogen-activated protein (MAP) kinase kinase kinase XP_002492430.1 440370 R 644223 CDS PAS_chr3_0221 254570643 8199970 complement(444718..445200) 1 NC_012965.1 Mitochondrial ribosomal protein of the large subunit 445200 8199970 PAS_chr3_0221 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002492431.1 444718 R 644223 CDS PAS_chr3_0222 254570645 8199971 complement(445350..446039) 1 NC_012965.1 3-hydroxyacyl-CoA dehydratase 446039 8199971 PAS_chr3_0222 Pichia pastoris GS115 3-hydroxyacyl-CoA dehydratase XP_002492432.1 445350 R 644223 CDS PAS_chr3_1164 254570647 8199972 446438..448546 1 NC_012965.1 hypothetical protein 448546 8199972 PAS_chr3_1164 Pichia pastoris GS115 hypothetical protein XP_002492433.1 446438 D 644223 CDS PAS_chr3_0223 254570649 8200196 448741..450153 1 NC_012965.1 non-ATPase regulatory subunit of the 26S proteasome lid 450153 8200196 PAS_chr3_0223 Pichia pastoris GS115 non-ATPase regulatory subunit of the 26S proteasome lid XP_002492434.1 448741 D 644223 CDS PAS_chr3_1165 254570651 8199973 450270..451046 1 NC_012965.1 hypothetical protein 451046 8199973 PAS_chr3_1165 Pichia pastoris GS115 hypothetical protein XP_002492435.1 450270 D 644223 CDS PAS_chr3_0224 254570653 8200197 complement(451071..453587) 1 NC_012965.1 DNA-dependent ATPase 453587 8200197 PAS_chr3_0224 Pichia pastoris GS115 DNA-dependent ATPase XP_002492436.1 451071 R 644223 CDS PAS_chr3_0225 254570655 8199974 453965..455437 1 NC_012965.1 Soluble fumarate reductase 455437 8199974 PAS_chr3_0225 Pichia pastoris GS115 Soluble fumarate reductase XP_002492437.1 453965 D 644223 CDS PAS_chr3_0226 254570657 8199975 455581..457113 1 NC_012965.1 Vacuolar transporter 457113 8199975 PAS_chr3_0226 Pichia pastoris GS115 Vacuolar transporter XP_002492438.1 455581 D 644223 CDS PAS_chr3_1166 254570659 8199976 join(457382..457487,457561..458996) 1 NC_012965.1 hypothetical protein 458996 8199976 PAS_chr3_1166 Pichia pastoris GS115 hypothetical protein XP_002492439.1 457382 D 644223 CDS PAS_chr3_0227 254570661 8200198 complement(459104..460012) 1 NC_012965.1 Primary component of eisosomes 460012 8200198 PAS_chr3_0227 Pichia pastoris GS115 Primary component of eisosomes XP_002492440.1 459104 R 644223 CDS PAS_chr3_0228 254570663 8199977 complement(460386..461516) 1 NC_012965.1 Catalytic subunit of the Hat1p-Hat2p histone acetyltransferase complex 461516 8199977 PAS_chr3_0228 Pichia pastoris GS115 Catalytic subunit of the Hat1p-Hat2p histone acetyltransferase complex XP_002492441.1 460386 R 644223 CDS PAS_chr3_0229 254570665 8199978 461789..462604 1 NC_012965.1 hypothetical protein 462604 8199978 PAS_chr3_0229 Pichia pastoris GS115 hypothetical protein XP_002492442.1 461789 D 644223 CDS PAS_chr3_0230 254570667 8199979 463134..465107 1 NC_012965.1 ATPase involved in protein folding and the response to stress 465107 8199979 PAS_chr3_0230 Pichia pastoris GS115 ATPase involved in protein folding and the response to stress XP_002492443.1 463134 D 644223 CDS PAS_chr3_1167 254570669 8199980 465380..465991 1 NC_012965.1 hypothetical protein 465991 8199980 PAS_chr3_1167 Pichia pastoris GS115 hypothetical protein XP_002492444.1 465380 D 644223 CDS PAS_chr3_1168 254570671 8200199 466178..466732 1 NC_012965.1 hypothetical protein 466732 8200199 PAS_chr3_1168 Pichia pastoris GS115 hypothetical protein XP_002492445.1 466178 D 644223 CDS PAS_chr3_1169 254570673 8200200 join(467400..467409,467749..467762,468021..469127) 1 NC_012965.1 hypothetical protein 469127 8200200 PAS_chr3_1169 Pichia pastoris GS115 hypothetical protein XP_002492446.1 467400 D 644223 CDS PAS_chr3_0231 254570675 8200201 complement(469165..470121) 1 NC_012965.1 hypothetical protein 470121 8200201 PAS_chr3_0231 Pichia pastoris GS115 hypothetical protein XP_002492447.1 469165 R 644223 CDS PAS_chr3_0232 254570677 8199981 470570..472141 1 NC_012965.1 Transcriptional activator 472141 8199981 PAS_chr3_0232 Pichia pastoris GS115 Transcriptional activator XP_002492448.1 470570 D 644223 CDS PAS_chr3_0233 254570679 8199982 472348..473124 1 NC_012965.1 Proliferating cell nuclear antigen (PCNA) 473124 8199982 PAS_chr3_0233 Pichia pastoris GS115 Proliferating cell nuclear antigen (PCNA) XP_002492449.1 472348 D 644223 CDS PAS_chr3_0234 254570681 8199983 complement(473178..473702) 1 NC_012965.1 Catalytic subunit of N-terminal acetyltransferase of the NatC type 473702 8199983 PAS_chr3_0234 Pichia pastoris GS115 Catalytic subunit of N-terminal acetyltransferase of the NatC type XP_002492450.1 473178 R 644223 CDS PAS_chr3_0235 254570683 8199984 complement(473969..474811) 1 NC_012965.1 Zinc-finger protein of unknown function 474811 8199984 PAS_chr3_0235 Pichia pastoris GS115 Zinc-finger protein of unknown function XP_002492451.1 473969 R 644223 CDS PAS_chr3_0236 254570685 8199985 complement(475354..476346) 1 NC_012965.1 Elongase 476346 8199985 PAS_chr3_0236 Pichia pastoris GS115 Elongase XP_002492452.1 475354 R 644223 CDS PAS_chr3_0238 254570687 8199986 join(481331..481336,481396..481917) 1 NC_012965.1 Subunit of the ARP2/3 complex 481917 8199986 PAS_chr3_0238 Pichia pastoris GS115 Subunit of the ARP2/3 complex XP_002492453.1 481331 D 644223 CDS PAS_chr3_0239 254570689 8199987 482144..483025 1 NC_012965.1 Putative protein of unknown function 483025 8199987 PAS_chr3_0239 Pichia pastoris GS115 Putative protein of unknown function XP_002492454.1 482144 D 644223 CDS PAS_chr3_1170 254570691 8199988 483172..483882 1 NC_012965.1 hypothetical protein 483882 8199988 PAS_chr3_1170 Pichia pastoris GS115 hypothetical protein XP_002492455.1 483172 D 644223 CDS PAS_chr3_0240 254570693 8200202 484244..485623 1 NC_012965.1 Essential protein required for biogenesis of 40S (small) ribosomal subunit 485623 8200202 PAS_chr3_0240 Pichia pastoris GS115 Essential protein required for biogenesis of 40S (small) ribosomal subunit XP_002492456.1 484244 D 644223 CDS PAS_chr3_0241 254570695 8199989 complement(485768..486904) 1 NC_012965.1 Plasma membrane associated protein phosphatase involved in the general stress response 486904 8199989 PAS_chr3_0241 Pichia pastoris GS115 Plasma membrane associated protein phosphatase involved in the general stress response XP_002492457.1 485768 R 644223 CDS PAS_chr3_0242 254570697 8199990 complement(487726..490017) 1 NC_012965.1 Topoisomerase I 490017 8199990 PAS_chr3_0242 Pichia pastoris GS115 Topoisomerase I XP_002492458.1 487726 R 644223 CDS PAS_chr3_0243 254570699 8199991 490478..492508 1 NC_012965.1 Polo-like kinase with similarity to Xenopus Plx1 and S. pombe Plo1p 492508 8199991 PAS_chr3_0243 Pichia pastoris GS115 Polo-like kinase with similarity to Xenopus Plx1 and S. pombe Plo1p XP_002492459.1 490478 D 644223 CDS PAS_chr3_0244 254570701 8199992 complement(join(492700..493003,493063..493115)) 1 NC_012965.1 RNA polymerase II subunit B12.5 493115 8199992 PAS_chr3_0244 Pichia pastoris GS115 RNA polymerase II subunit B12.5 XP_002492460.1 492700 R 644223 CDS PAS_chr3_0245 254570703 8199993 join(493629..493705,493809..494010,494088..498158) 1 NC_012965.1 Component of the Sin3p-Rpd3p histone deacetylase complex 498158 8199993 PAS_chr3_0245 Pichia pastoris GS115 Component of the Sin3p-Rpd3p histone deacetylase complex XP_002492461.1 493629 D 644223 CDS PAS_chr3_0246 254570705 8200075 complement(498257..499447) 1 NC_012965.1 Palmitoyltransferase with autoacylation activity 499447 8200075 PAS_chr3_0246 Pichia pastoris GS115 Palmitoyltransferase with autoacylation activity XP_002492462.1 498257 R 644223 CDS PAS_chr3_0247 254570707 8200076 499558..500937 1 NC_012965.1 hypothetical protein 500937 8200076 PAS_chr3_0247 Pichia pastoris GS115 hypothetical protein XP_002492463.1 499558 D 644223 CDS PAS_chr3_0248 254570709 8200077 501008..502189 1 NC_012965.1 Component of the chromatin assembly complex (with Rlf2p and Msi1p) 502189 8200077 PAS_chr3_0248 Pichia pastoris GS115 Component of the chromatin assembly complex (with Rlf2p and Msi1p) XP_002492464.1 501008 D 644223 CDS PAS_chr3_0249 254570711 8200078 502293..502766 1 NC_012965.1 hypothetical protein 502766 8200078 PAS_chr3_0249 Pichia pastoris GS115 hypothetical protein XP_002492465.1 502293 D 644223 CDS PAS_chr3_0250 254570713 8200079 complement(502831..503307) 1 NC_012965.1 Subunit of a histone deacetylase complex 503307 8200079 PAS_chr3_0250 Pichia pastoris GS115 Subunit of a histone deacetylase complex XP_002492466.1 502831 R 644223 CDS PAS_chr3_0251 254570715 8200080 504046..505203 1 NC_012965.1 Putative protein with sequence similarity to S. pombe gti1+ (gluconate transport inducer 1) 505203 8200080 PAS_chr3_0251 Pichia pastoris GS115 Putative protein with sequence similarity to S. pombe gti1+ (gluconate transport inducer 1) XP_002492467.1 504046 D 644223 CDS PAS_chr3_0252 254570717 8200081 complement(505277..506647) 1 NC_012965.1 Steryl ester hydrolase 506647 8200081 PAS_chr3_0252 Pichia pastoris GS115 Steryl ester hydrolase XP_002492468.1 505277 R 644223 CDS PAS_chr3_0253 254570719 8200082 complement(506956..508527) 1 NC_012965.1 Acetyl-coA hydrolase 508527 8200082 PAS_chr3_0253 Pichia pastoris GS115 Acetyl-coA hydrolase XP_002492469.1 506956 R 644223 CDS PAS_chr3_1171 254570721 8200083 complement(509330..510640) 1 NC_012965.1 hypothetical protein 510640 8200083 PAS_chr3_1171 Pichia pastoris GS115 hypothetical protein XP_002492470.1 509330 R 644223 CDS PAS_chr3_0255 254570723 8200203 complement(510816..511721) 1 NC_012965.1 Mitochondrial GTP/GDP transporter 511721 8200203 PAS_chr3_0255 Pichia pastoris GS115 Mitochondrial GTP/GDP transporter XP_002492471.1 510816 R 644223 CDS PAS_chr3_0256 254570725 8200084 511989..513620 1 NC_012965.1 mRNA 3' end processing factor 513620 8200084 PAS_chr3_0256 Pichia pastoris GS115 mRNA 3' end processing factor XP_002492472.1 511989 D 644223 CDS PAS_chr3_0257 254570727 8200085 complement(513752..514507) 1 NC_012965.1 Adenylate kinase 514507 8200085 PAS_chr3_0257 Pichia pastoris GS115 Adenylate kinase XP_002492473.1 513752 R 644223 CDS PAS_chr3_0258 254570729 8200086 join(514810..514845,514898..516121) 1 NC_012965.1 hypothetical protein 516121 8200086 PAS_chr3_0258 Pichia pastoris GS115 hypothetical protein XP_002492474.1 514810 D 644223 CDS PAS_chr3_0259 254570731 8200087 516430..519183 1 NC_012965.1 Putative protein of unknown function 519183 8200087 PAS_chr3_0259 Pichia pastoris GS115 Putative protein of unknown function XP_002492475.1 516430 D 644223 CDS PAS_chr3_0260 254570733 8200088 complement(519238..520365) 1 NC_012965.1 hypothetical protein 520365 8200088 PAS_chr3_0260 Pichia pastoris GS115 hypothetical protein XP_002492476.1 519238 R 644223 CDS PAS_chr3_0261 254570735 8200089 join(520684..520745,520846..521806) 1 NC_012965.1 hypothetical protein 521806 8200089 PAS_chr3_0261 Pichia pastoris GS115 hypothetical protein XP_002492477.1 520684 D 644223 CDS PAS_chr3_0262 254570737 8200090 complement(521900..522508) 1 NC_012965.1 Thymidylate and uridylate kinase 522508 8200090 PAS_chr3_0262 Pichia pastoris GS115 Thymidylate and uridylate kinase XP_002492478.1 521900 R 644223 CDS PAS_chr3_1172 254570739 8200091 complement(522531..523442) 1 NC_012965.1 hypothetical protein 523442 8200091 PAS_chr3_1172 Pichia pastoris GS115 hypothetical protein XP_002492479.1 522531 R 644223 CDS PAS_chr3_0263 254570741 8200204 complement(523580..524389) 1 NC_012965.1 Mitochondrial outer membrane protein 524389 8200204 PAS_chr3_0263 Pichia pastoris GS115 Mitochondrial outer membrane protein XP_002492480.1 523580 R 644223 CDS PAS_chr3_0264 254570743 8200092 524540..525664 1 NC_012965.1 Ferrochelatase 525664 8200092 PAS_chr3_0264 Pichia pastoris GS115 Ferrochelatase XP_002492481.1 524540 D 644223 CDS PAS_chr3_0265 254570745 8200093 complement(join(525717..526296,526353..529153)) 1 NC_012965.1 Non-SMC subunit of the condensin complex (Smc2p-Smc4p-Ycs4p-Brn1p-Ycg1p) 529153 8200093 PAS_chr3_0265 Pichia pastoris GS115 Non-SMC subunit of the condensin complex (Smc2p-Smc4p-Ycs4p-Brn1p-Ycg1p) XP_002492482.1 525717 R 644223 CDS PAS_chr3_0266 254570747 8200094 complement(529727..531373) 1 NC_012965.1 Putative protein with similarity to the allantoate permease (Dal5p) 531373 8200094 PAS_chr3_0266 Pichia pastoris GS115 Putative protein with similarity to the allantoate permease (Dal5p) XP_002492483.1 529727 R 644223 CDS PAS_chr3_1173 254570749 8200095 complement(531692..532549) 1 NC_012965.1 hypothetical protein 532549 8200095 PAS_chr3_1173 Pichia pastoris GS115 hypothetical protein XP_002492484.1 531692 R 644223 CDS PAS_chr3_0267 254570751 8200205 complement(532695..533930) 1 NC_012965.1 TFIID subunit (48 kDa) 533930 8200205 PAS_chr3_0267 Pichia pastoris GS115 TFIID subunit (48 kDa) XP_002492485.1 532695 R 644223 CDS PAS_chr3_0268 254570753 8200096 534314..535420 1 NC_012965.1 RNA terminal phosphate cyclase-like protein 535420 8200096 PAS_chr3_0268 Pichia pastoris GS115 RNA terminal phosphate cyclase-like protein XP_002492486.1 534314 D 644223 CDS PAS_chr3_0269 254570755 8200097 complement(join(535660..535681,535842..536586,536654..537251)) 1 NC_012965.1 Protein required for sorting proteins to the vacuole 537251 8200097 PAS_chr3_0269 Pichia pastoris GS115 Protein required for sorting proteins to the vacuole XP_002492487.1 535660 R 644223 CDS PAS_chr3_0270 254570757 8200098 complement(537367..537930) 1 NC_012965.1 Coenzyme Q (ubiquinone) binding protein 537930 8200098 PAS_chr3_0270 Pichia pastoris GS115 Coenzyme Q (ubiquinone) binding protein XP_002492488.1 537367 R 644223 CDS PAS_chr3_0271 254570759 8200099 join(538327..538870,538984..540128) 1 NC_012965.1 Lysophospholipid acyltransferase 540128 8200099 PAS_chr3_0271 Pichia pastoris GS115 Lysophospholipid acyltransferase XP_002492489.1 538327 D 644223 CDS PAS_chr3_0272 254570761 8200100 complement(540156..541013) 1 NC_012965.1 hypothetical protein 541013 8200100 PAS_chr3_0272 Pichia pastoris GS115 hypothetical protein XP_002492490.1 540156 R 644223 CDS PAS_chr3_0273 254570763 8200101 complement(541108..542034) 1 NC_012965.1 Non-essential hydrolase involved in mRNA decapping 542034 8200101 PAS_chr3_0273 Pichia pastoris GS115 Non-essential hydrolase involved in mRNA decapping XP_002492491.1 541108 R 644223 CDS PAS_chr3_0274 254570765 8200102 complement(join(542341..542951,543009..543042)) 1 NC_012965.1 R-SNARE protein 543042 8200102 PAS_chr3_0274 Pichia pastoris GS115 R-SNARE protein XP_002492492.1 542341 R 644223 CDS PAS_chr3_0275 254570767 8200103 543228..544370 1 NC_012965.1 hypothetical protein 544370 8200103 PAS_chr3_0275 Pichia pastoris GS115 hypothetical protein XP_002492493.1 543228 D 644223 CDS PAS_chr3_0276 254570769 8200104 complement(544377..545537) 1 NC_012965.1 hypothetical protein 545537 8200104 PAS_chr3_0276 Pichia pastoris GS115 hypothetical protein XP_002492494.1 544377 R 644223 CDS PAS_chr3_0277 254570771 8200105 complement(546054..547532) 1 NC_012965.1 6-phosphogluconate dehydrogenase (decarboxylating) 547532 8200105 PAS_chr3_0277 Pichia pastoris GS115 6-phosphogluconate dehydrogenase (decarboxylating) XP_002492495.1 546054 R 644223 CDS PAS_chr3_0278 254570773 8200106 548266..550068 1 NC_012965.1 Protein with similarity to monocarboxylate permeases 550068 8200106 PAS_chr3_0278 Pichia pastoris GS115 Protein with similarity to monocarboxylate permeases XP_002492496.1 548266 D 644223 CDS PAS_chr3_0279 254570775 8200107 complement(550571..552928) 1 NC_012965.1 Protein of unknown function, contains two predicted GTP-binding motifs 552928 8200107 PAS_chr3_0279 Pichia pastoris GS115 Protein of unknown function, contains two predicted GTP-binding motifs XP_002492497.1 550571 R 644223 CDS PAS_chr3_0280 254570777 8200108 553408..554412 1 NC_012965.1 hypothetical protein 554412 8200108 PAS_chr3_0280 Pichia pastoris GS115 hypothetical protein XP_002492498.1 553408 D 644223 CDS PAS_chr3_0281 254570779 8200109 complement(554429..555028) 1 NC_012965.1 Polyphosphate phosphatase 555028 8200109 PAS_chr3_0281 Pichia pastoris GS115 Polyphosphate phosphatase XP_002492499.1 554429 R 644223 CDS PAS_chr3_1174 254570781 8200110 complement(555577..555780) 1 NC_012965.1 hypothetical protein 555780 8200110 PAS_chr3_1174 Pichia pastoris GS115 hypothetical protein XP_002492500.1 555577 R 644223 CDS PAS_chr3_0282 254570783 8200206 complement(555949..557973) 1 NC_012965.1 Plasma membrane transporter for both urea and polyamines 557973 8200206 PAS_chr3_0282 Pichia pastoris GS115 Plasma membrane transporter for both urea and polyamines XP_002492501.1 555949 R 644223 CDS PAS_chr3_0283 254570785 8200111 558706..560385 1 NC_012965.1 Putative amidase 560385 8200111 PAS_chr3_0283 Pichia pastoris GS115 Putative amidase XP_002492502.1 558706 D 644223 CDS PAS_chr3_0284 254570787 8200112 560538..562466 1 NC_012965.1 hypothetical protein 562466 8200112 PAS_chr3_0284 Pichia pastoris GS115 hypothetical protein XP_002492503.1 560538 D 644223 CDS PAS_chr3_0285 254570789 8200113 562967..565384 1 NC_012965.1 Glutamine tRNA synthetase 565384 8200113 PAS_chr3_0285 Pichia pastoris GS115 Glutamine tRNA synthetase XP_002492504.1 562967 D 644223 CDS PAS_chr3_0286 254570791 8200114 complement(565611..567137) 1 NC_012965.1 hypothetical protein 567137 8200114 PAS_chr3_0286 Pichia pastoris GS115 hypothetical protein XP_002492505.1 565611 R 644223 CDS PAS_chr3_0287 254570793 8200115 complement(568785..569624) 1 NC_012965.1 Integral membrane protein localized to mitochondria (untagged protein) and eisosomes, immobile patch 569624 8200115 PAS_chr3_0287 Pichia pastoris GS115 Integral membrane protein localized to mitochondria (untagged protein) and eisosomes, immobile patch XP_002492506.1 568785 R 644223 CDS PAS_chr3_0288 254570795 8200116 570416..570703 1 NC_012965.1 hypothetical protein 570703 8200116 PAS_chr3_0288 Pichia pastoris GS115 hypothetical protein XP_002492507.1 570416 D 644223 CDS PAS_chr3_0289 254570797 8200117 complement(570833..571336) 1 NC_012965.1 hypothetical protein 571336 8200117 PAS_chr3_0289 Pichia pastoris GS115 hypothetical protein XP_002492508.1 570833 R 644223 CDS PAS_chr3_0290 254570799 8200118 join(571585..572247,572799..572987) 1 NC_012965.1 Protein component of the small (40S) ribosomal subunit 572987 8200118 PAS_chr3_0290 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002492509.1 571585 D 644223 CDS PAS_chr3_0291 254570801 8200119 complement(573046..574143) 1 NC_012965.1 Para hydroxybenzoate: polyprenyl transferase 574143 8200119 PAS_chr3_0291 Pichia pastoris GS115 Para hydroxybenzoate: polyprenyl transferase XP_002492510.1 573046 R 644223 CDS PAS_chr3_1175 254570803 8200120 complement(574232..578197) 1 NC_012965.1 hypothetical protein 578197 8200120 PAS_chr3_1175 Pichia pastoris GS115 hypothetical protein XP_002492511.1 574232 R 644223 CDS PAS_chr3_0292 254570805 8200207 complement(578358..579857) 1 NC_012965.1 Essential protein possibly involved in secretion 579857 8200207 PAS_chr3_0292 Pichia pastoris GS115 Essential protein possibly involved in secretion XP_002492512.1 578358 R 644223 CDS PAS_chr3_1176 254570807 8200121 complement(579957..581228) 1 NC_012965.1 hypothetical protein 581228 8200121 PAS_chr3_1176 Pichia pastoris GS115 hypothetical protein XP_002492513.1 579957 R 644223 CDS PAS_chr3_0293 254570809 8200208 581365..581784 1 NC_012965.1 Catalytic core subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) 581784 8200208 PAS_chr3_0293 Pichia pastoris GS115 Catalytic core subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C) XP_002492514.1 581365 D 644223 CDS PAS_chr3_0294 254570811 8200122 581935..583290 1 NC_012965.1 Gamma-glutamyl kinase 583290 8200122 PAS_chr3_0294 Pichia pastoris GS115 Gamma-glutamyl kinase XP_002492515.1 581935 D 644223 CDS PAS_chr3_0295 254570813 8200123 583435..585927 1 NC_012965.1 Vacuolar transporter 585927 8200123 PAS_chr3_0295 Pichia pastoris GS115 Vacuolar transporter XP_002492516.1 583435 D 644223 CDS PAS_chr3_0297 254570815 8200124 588983..589885 1 NC_012965.1 hypothetical protein 589885 8200124 PAS_chr3_0297 Pichia pastoris GS115 hypothetical protein XP_002492517.1 588983 D 644223 CDS PAS_chr3_0298 254570817 8200125 complement(590012..593641) 1 NC_012965.1 Protein required for proper cell fusion and cell morphology 593641 8200125 PAS_chr3_0298 Pichia pastoris GS115 Protein required for proper cell fusion and cell morphology XP_002492518.1 590012 R 644223 CDS PAS_chr3_0299 254570819 8200126 594608..596191 1 NC_012965.1 Aspartic protease, attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor 596191 8200126 PAS_chr3_0299 Pichia pastoris GS115 Aspartic protease, attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor XP_002492519.1 594608 D 644223 CDS PAS_chr3_0300 254570821 8200127 complement(596446..598134) 1 NC_012965.1 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p 598134 8200127 PAS_chr3_0300 Pichia pastoris GS115 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p XP_002492520.1 596446 R 644223 CDS PAS_chr3_0301 254570823 8200128 598400..601021 1 NC_012965.1 Component of the GARP (Golgi-associated retrograde protein) complex 601021 8200128 PAS_chr3_0301 Pichia pastoris GS115 Component of the GARP (Golgi-associated retrograde protein) complex XP_002492521.1 598400 D 644223 CDS PAS_chr3_0302 254570825 8200129 complement(602055..603386) 1 NC_012965.1 Mitochondrial cell death effector that translocates to the nucleus in response to apoptotic stimuli 603386 8200129 PAS_chr3_0302 Pichia pastoris GS115 Mitochondrial cell death effector that translocates to the nucleus in response to apoptotic stimuli XP_002492522.1 602055 R 644223 CDS PAS_chr3_0303 254570827 8200130 complement(604555..605976) 1 NC_012965.1 Aspartic protease, attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor 605976 8200130 PAS_chr3_0303 Pichia pastoris GS115 Aspartic protease, attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor XP_002492523.1 604555 R 644223 CDS PAS_chr3_0305 254570829 8200131 607346..608284 1 NC_012965.1 Phosphatidyl Glycerol phospholipase C 608284 8200131 PAS_chr3_0305 Pichia pastoris GS115 Phosphatidyl Glycerol phospholipase C XP_002492524.1 607346 D 644223 CDS PAS_chr3_0306 254570831 8200132 608614..610404 1 NC_012965.1 1,3-beta-glucanosyltransferase 610404 8200132 PAS_chr3_0306 Pichia pastoris GS115 1,3-beta-glucanosyltransferase XP_002492525.1 608614 D 644223 CDS PAS_chr3_0307 254570833 8200133 complement(610470..611204) 1 NC_012965.1 Constituent of the mitochondrial inner membrane presequence translocase (TIM23 complex) 611204 8200133 PAS_chr3_0307 Pichia pastoris GS115 Constituent of the mitochondrial inner membrane presequence translocase (TIM23 complex) XP_002492526.1 610470 R 644223 CDS PAS_chr3_0308 254570835 8200134 complement(611464..613338) 1 NC_012965.1 Required for a post-incision step in the repair of DNA single and double-strand breaks 613338 8200134 PAS_chr3_0308 Pichia pastoris GS115 Required for a post-incision step in the repair of DNA single and double-strand breaks XP_002492527.1 611464 R 644223 CDS PAS_chr3_0309 254570837 8200135 613730..615778 1 NC_012965.1 Putative protein of unknown function 615778 8200135 PAS_chr3_0309 Pichia pastoris GS115 Putative protein of unknown function XP_002492528.1 613730 D 644223 CDS PAS_chr3_0310 254570839 8200136 complement(615821..617152) 1 NC_012965.1 UBX (ubiquitin regulatory X) domain-containing protein 617152 8200136 PAS_chr3_0310 Pichia pastoris GS115 UBX (ubiquitin regulatory X) domain-containing protein XP_002492529.1 615821 R 644223 CDS PAS_chr3_0311 254570841 8200137 complement(617219..617971) 1 NC_012965.1 hypothetical protein 617971 8200137 PAS_chr3_0311 Pichia pastoris GS115 hypothetical protein XP_002492530.1 617219 R 644223 CDS PAS_chr3_0312 254570843 8200138 618158..619693 1 NC_012965.1 Component of the ESCRT-II complex 619693 8200138 PAS_chr3_0312 Pichia pastoris GS115 Component of the ESCRT-II complex XP_002492531.1 618158 D 644223 CDS PAS_chr3_0313 254570845 8200139 complement(619710..620876) 1 NC_012965.1 Component of the RAM signaling network 620876 8200139 PAS_chr3_0313 Pichia pastoris GS115 Component of the RAM signaling network XP_002492532.1 619710 R 644223 CDS PAS_chr3_0315 254570847 8200140 join(621802..621908,622019..623726) 1 NC_012965.1 Transporter, member of the ARN family of transporters that specifically recognize siderophore-iron c 623726 8200140 PAS_chr3_0315 Pichia pastoris GS115 Transporter, member of the ARN family of transporters that specifically recognize siderophore-iron c XP_002492533.1 621802 D 644223 CDS PAS_chr3_0316 254570849 8200141 join(624226..624261,624314..625249) 1 NC_012965.1 Cytoplasmic GTP binding protein 625249 8200141 PAS_chr3_0316 Pichia pastoris GS115 Cytoplasmic GTP binding protein XP_002492534.1 624226 D 644223 CDS PAS_chr3_0317 254570851 8200142 join(625496..625554,625625..626894) 1 NC_012965.1 Farnesyl-diphosphate farnesyl transferase (squalene synthase) 626894 8200142 PAS_chr3_0317 Pichia pastoris GS115 Farnesyl-diphosphate farnesyl transferase (squalene synthase) XP_002492535.1 625496 D 644223 CDS PAS_chr3_0318 254570853 8200143 complement(626931..628724) 1 NC_012965.1 hypothetical protein 628724 8200143 PAS_chr3_0318 Pichia pastoris GS115 hypothetical protein XP_002492536.1 626931 R 644223 CDS PAS_chr3_0319 254570855 8200144 629037..630023 1 NC_012965.1 hypothetical protein 630023 8200144 PAS_chr3_0319 Pichia pastoris GS115 hypothetical protein XP_002492537.1 629037 D 644223 CDS PAS_chr3_0320 254570857 8200145 complement(630044..633178) 1 NC_012965.1 Tubulin folding factor D 633178 8200145 PAS_chr3_0320 Pichia pastoris GS115 Tubulin folding factor D XP_002492538.1 630044 R 644223 CDS PAS_chr3_0321 254570859 8200146 633575..634375 1 NC_012965.1 hypothetical protein 634375 8200146 PAS_chr3_0321 Pichia pastoris GS115 hypothetical protein XP_002492539.1 633575 D 644223 CDS PAS_chr3_0322 254570861 8200147 complement(join(634558..634812,634920..636157,636258..638327,638374..638845)) 1 NC_012965.1 Essential type II topoisomerase 638845 8200147 PAS_chr3_0322 Pichia pastoris GS115 Essential type II topoisomerase XP_002492540.1 634558 R 644223 CDS PAS_chr3_0324 254570863 8200148 639080..640456 1 NC_012965.1 Component of the commitment complex 640456 8200148 PAS_chr3_0324 Pichia pastoris GS115 Component of the commitment complex XP_002492541.1 639080 D 644223 CDS PAS_chr3_0325 254570865 8200149 complement(640536..642605) 1 NC_012965.1 Essential splicesome assembly factor 642605 8200149 PAS_chr3_0325 Pichia pastoris GS115 Essential splicesome assembly factor XP_002492542.1 640536 R 644223 CDS PAS_chr3_0326 254570867 8199855 join(642694..642706,642784..643328,643435..643590) 1 NC_012965.1 hypothetical protein 643590 8199855 PAS_chr3_0326 Pichia pastoris GS115 hypothetical protein XP_002492543.1 642694 D 644223 CDS PAS_chr3_0327 254570869 8199460 join(643646..644267,644387..644934) 1 NC_012965.1 Putative membrane glycoprotein with strong similarity to Vth2p and Pep1p/Vps10p, may be involved in 644934 8199460 PAS_chr3_0327 Pichia pastoris GS115 Putative membrane glycoprotein with strong similarity to Vth2p and Pep1p/Vps10p, may be involved in XP_002492544.1 643646 D 644223 CDS PAS_chr3_0328 254570871 8199461 complement(645442..645639) 1 NC_012965.1 hypothetical protein 645639 8199461 PAS_chr3_0328 Pichia pastoris GS115 hypothetical protein XP_002492545.1 645442 R 644223 CDS PAS_chr3_0329 254570873 8199462 complement(645856..647718) 1 NC_012965.1 Subunit of the telomeric Ku complex (Yku70p-Yku80p) 647718 8199462 PAS_chr3_0329 Pichia pastoris GS115 Subunit of the telomeric Ku complex (Yku70p-Yku80p) XP_002492546.1 645856 R 644223 CDS PAS_chr3_0330 254570875 8199463 complement(647848..648675) 1 NC_012965.1 Trans-aconitate methyltransferase 648675 8199463 PAS_chr3_0330 Pichia pastoris GS115 Trans-aconitate methyltransferase XP_002492547.1 647848 R 644223 CDS PAS_chr3_0331 254570877 8199464 648941..653278 1 NC_012965.1 Protein involved in bud-site selection and required for axial budding pattern 653278 8199464 PAS_chr3_0331 Pichia pastoris GS115 Protein involved in bud-site selection and required for axial budding pattern XP_002492548.1 648941 D 644223 CDS PAS_chr3_0332 254570879 8199465 653646..654776 1 NC_012965.1 hypothetical protein 654776 8199465 PAS_chr3_0332 Pichia pastoris GS115 hypothetical protein XP_002492549.1 653646 D 644223 CDS PAS_chr3_0333 254570881 8199466 complement(654855..655799) 1 NC_012965.1 Subunit of cleavage polyadenylation factor (CPF) 655799 8199466 PAS_chr3_0333 Pichia pastoris GS115 Subunit of cleavage polyadenylation factor (CPF) XP_002492550.1 654855 R 644223 CDS PAS_chr3_0334 254570883 8199467 655890..656438 1 NC_012965.1 hypothetical protein 656438 8199467 PAS_chr3_0334 Pichia pastoris GS115 hypothetical protein XP_002492551.1 655890 D 644223 CDS PAS_chr3_0335 254570885 8199468 join(657295..657296,657495..657771) 1 NC_012965.1 Protein component of the large (60S) ribosomal subunit, identical to Rpl43Ap 657771 8199468 PAS_chr3_0335 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit, identical to Rpl43Ap XP_002492552.1 657295 D 644223 CDS PAS_chr3_0336 254570887 8199469 658126..658866 1 NC_012965.1 hypothetical protein 658866 8199469 PAS_chr3_0336 Pichia pastoris GS115 hypothetical protein XP_002492553.1 658126 D 644223 CDS PAS_chr3_0337 254570889 8199470 complement(659902..660771) 1 NC_012965.1 hypothetical protein 660771 8199470 PAS_chr3_0337 Pichia pastoris GS115 hypothetical protein XP_002492554.1 659902 R 644223 CDS PAS_chr3_0338 254570891 8199471 complement(661108..661725) 1 NC_012965.1 Flavin-linked sulfhydryl oxidase localized to the endoplasmic reticulum lumen 661725 8199471 PAS_chr3_0338 Pichia pastoris GS115 Flavin-linked sulfhydryl oxidase localized to the endoplasmic reticulum lumen XP_002492555.1 661108 R 644223 CDS PAS_chr3_0339 254570893 8199472 662065..663132 1 NC_012965.1 Protein that interacts physically and genetically with Tap42p, which regulates protein phosphatase 2 663132 8199472 PAS_chr3_0339 Pichia pastoris GS115 Protein that interacts physically and genetically with Tap42p, which regulates protein phosphatase 2 XP_002492556.1 662065 D 644223 CDS PAS_chr3_1177 254570895 8199473 complement(663233..665257) 1 NC_012965.1 hypothetical protein 665257 8199473 PAS_chr3_1177 Pichia pastoris GS115 hypothetical protein XP_002492557.1 663233 R 644223 CDS PAS_chr3_0340 254570897 8200209 complement(665692..668235) 1 NC_012965.1 Subunit of the core complex of translation initiation factor 3(eIF3) 668235 8200209 PAS_chr3_0340 Pichia pastoris GS115 Subunit of the core complex of translation initiation factor 3(eIF3) XP_002492558.1 665692 R 644223 CDS PAS_chr3_0341 254570899 8199474 668691..669209 1 NC_012965.1 hypothetical protein 669209 8199474 PAS_chr3_0341 Pichia pastoris GS115 hypothetical protein XP_002492559.1 668691 D 644223 CDS PAS_chr3_0342 254570901 8199475 complement(669237..671513) 1 NC_012965.1 ATPase required for the release of Sec17p 671513 8199475 PAS_chr3_0342 Pichia pastoris GS115 ATPase required for the release of Sec17p XP_002492560.1 669237 R 644223 CDS PAS_chr3_1178 254570903 8199476 complement(671904..672437) 1 NC_012965.1 hypothetical protein 672437 8199476 PAS_chr3_1178 Pichia pastoris GS115 hypothetical protein XP_002492561.1 671904 R 644223 CDS PAS_chr3_0343 254570905 8200210 join(672548..672652,672710..673711) 1 NC_012965.1 hypothetical protein 673711 8200210 PAS_chr3_0343 Pichia pastoris GS115 hypothetical protein XP_002492562.1 672548 D 644223 CDS PAS_chr3_1179 254570907 8199477 complement(673741..675261) 1 NC_012965.1 hypothetical protein 675261 8199477 PAS_chr3_1179 Pichia pastoris GS115 hypothetical protein XP_002492563.1 673741 R 644223 CDS PAS_chr3_0344 254570909 8200211 complement(675417..679229) 1 NC_012965.1 Essential DEAH-box ATP-dependent RNA helicase specific to the U3 snoRNP 679229 8200211 PAS_chr3_0344 Pichia pastoris GS115 Essential DEAH-box ATP-dependent RNA helicase specific to the U3 snoRNP XP_002492564.1 675417 R 644223 CDS PAS_chr3_0345 254570911 8199478 679743..680726 1 NC_012965.1 Histone acetyltransferase (HAT) catalytic subunit of the SAS complex (Sas2p-Sas4p-Sas5p) 680726 8199478 PAS_chr3_0345 Pichia pastoris GS115 Histone acetyltransferase (HAT) catalytic subunit of the SAS complex (Sas2p-Sas4p-Sas5p) XP_002492565.1 679743 D 644223 CDS PAS_chr3_0346 254570913 8199479 complement(680762..684073) 1 NC_012965.1 DNA helicase 684073 8199479 PAS_chr3_0346 Pichia pastoris GS115 DNA helicase XP_002492566.1 680762 R 644223 CDS PAS_chr3_0347 254570915 8199480 684535..687855 1 NC_012965.1 Serine/threonine protein kinase involved in regulation of exocytosis 687855 8199480 PAS_chr3_0347 Pichia pastoris GS115 Serine/threonine protein kinase involved in regulation of exocytosis XP_002492567.1 684535 D 644223 CDS PAS_chr3_0348 254570917 8199481 complement(687934..689223) 1 NC_012965.1 hypothetical protein 689223 8199481 PAS_chr3_0348 Pichia pastoris GS115 hypothetical protein XP_002492568.1 687934 R 644223 CDS PAS_chr3_0349 254570919 8199482 690318..691127 1 NC_012965.1 NADP(+)-dependent dehydrogenase 691127 8199482 PAS_chr3_0349 Pichia pastoris GS115 NADP(+)-dependent dehydrogenase XP_002492569.1 690318 D 644223 CDS PAS_chr3_1180 254570921 8199483 complement(691149..692522) 1 NC_012965.1 hypothetical protein 692522 8199483 PAS_chr3_1180 Pichia pastoris GS115 hypothetical protein XP_002492570.1 691149 R 644223 CDS PAS_chr3_0350 254570923 8200212 complement(692788..695094) 1 NC_012965.1 Ferric reductase and cupric reductase 695094 8200212 PAS_chr3_0350 Pichia pastoris GS115 Ferric reductase and cupric reductase XP_002492571.1 692788 R 644223 CDS PAS_chr3_0351 254570925 8199484 complement(695252..696274) 1 NC_012965.1 Putative protein of unknown function 696274 8199484 PAS_chr3_0351 Pichia pastoris GS115 Putative protein of unknown function XP_002492572.1 695252 R 644223 CDS PAS_chr3_0352 254570927 8199485 696575..697663 1 NC_012965.1 Putative SCF-ubiquitin ligase F-box protein 697663 8199485 PAS_chr3_0352 Pichia pastoris GS115 Putative SCF-ubiquitin ligase F-box protein XP_002492573.1 696575 D 644223 CDS PAS_chr3_0353 254570929 8199486 complement(join(697676..697865,697909..698075)) 1 NC_012965.1 hypothetical protein 698075 8199486 PAS_chr3_0353 Pichia pastoris GS115 hypothetical protein XP_002492574.1 697676 R 644223 CDS PAS_chr3_0354 254570931 8199487 join(698438..699964,700032..700133) 1 NC_012965.1 Phosphatidylinositol 3-phosphate [PI(3)P] phosphatase 700133 8199487 PAS_chr3_0354 Pichia pastoris GS115 Phosphatidylinositol 3-phosphate [PI(3)P] phosphatase XP_002492575.1 698438 D 644223 CDS PAS_chr3_0355 254570933 8199488 complement(700288..701073) 1 NC_012965.1 Putative protein of unknown function 701073 8199488 PAS_chr3_0355 Pichia pastoris GS115 Putative protein of unknown function XP_002492576.1 700288 R 644223 CDS PAS_chr3_0356 254570935 8199489 complement(701254..701883) 1 NC_012965.1 hypothetical protein 701883 8199489 PAS_chr3_0356 Pichia pastoris GS115 hypothetical protein XP_002492577.1 701254 R 644223 CDS PAS_chr3_0357 254570937 8199490 complement(702047..703576) 1 NC_012965.1 ceramide glucosyltransferase 703576 8199490 PAS_chr3_0357 Pichia pastoris GS115 ceramide glucosyltransferase XP_002492578.1 702047 R 644223 CDS PAS_chr3_0358 254570939 8199491 703775..704566 1 NC_012965.1 hypothetical protein 704566 8199491 PAS_chr3_0358 Pichia pastoris GS115 hypothetical protein XP_002492579.1 703775 D 644223 CDS PAS_chr3_0359 254570941 8199492 complement(join(704742..705224,705281..705322)) 1 NC_012965.1 Ubiquitin-conjugating enzyme (E2) 705322 8199492 PAS_chr3_0359 Pichia pastoris GS115 Ubiquitin-conjugating enzyme (E2) XP_002492580.1 704742 R 644223 CDS PAS_chr3_0360 254570943 8199493 705392..706903 1 NC_012965.1 Mitochondrial protein kinase 706903 8199493 PAS_chr3_0360 Pichia pastoris GS115 Mitochondrial protein kinase XP_002492581.1 705392 D 644223 CDS PAS_chr3_0361 254570945 8199494 707000..707659 1 NC_012965.1 Nicotinamidase 707659 8199494 PAS_chr3_0361 Pichia pastoris GS115 Nicotinamidase XP_002492582.1 707000 D 644223 CDS PAS_chr3_1181 254570947 8199495 join(707697..707811,707871..708175) 1 NC_012965.1 hypothetical protein 708175 8199495 PAS_chr3_1181 Pichia pastoris GS115 hypothetical protein XP_002492583.1 707697 D 644223 CDS PAS_chr3_0362 254570949 8200213 708252..709109 1 NC_012965.1 hypothetical protein 709109 8200213 PAS_chr3_0362 Pichia pastoris GS115 hypothetical protein XP_002492584.1 708252 D 644223 CDS PAS_chr3_0363 254570951 8199496 complement(709157..709585) 1 NC_012965.1 Conserved ubiquitin-like modifier 709585 8199496 PAS_chr3_0363 Pichia pastoris GS115 Conserved ubiquitin-like modifier XP_002492585.1 709157 R 644223 CDS PAS_chr3_0364 254570953 8199497 709831..711768 1 NC_012965.1 Protein required for oxidation of specific cysteine residues of the transcription factor Yap1p 711768 8199497 PAS_chr3_0364 Pichia pastoris GS115 Protein required for oxidation of specific cysteine residues of the transcription factor Yap1p XP_002492586.1 709831 D 644223 CDS PAS_chr3_1182 254570955 8199498 complement(711790..713361) 1 NC_012965.1 hypothetical protein 713361 8199498 PAS_chr3_1182 Pichia pastoris GS115 hypothetical protein XP_002492587.1 711790 R 644223 CDS PAS_chr3_0365 254570957 8200214 complement(713546..715489) 1 NC_012965.1 Mitochondrial matrix ATPase 715489 8200214 PAS_chr3_0365 Pichia pastoris GS115 Mitochondrial matrix ATPase XP_002492588.1 713546 R 644223 CDS PAS_chr3_0366 254570959 8199499 716053..717210 1 NC_012965.1 hypothetical protein 717210 8199499 PAS_chr3_0366 Pichia pastoris GS115 hypothetical protein XP_002492589.1 716053 D 644223 CDS PAS_chr3_0367 254570961 8199500 717360..718256 1 NC_012965.1 hypothetical protein 718256 8199500 PAS_chr3_0367 Pichia pastoris GS115 hypothetical protein XP_002492590.1 717360 D 644223 CDS PAS_chr3_0368 254570963 8199501 complement(718315..721968) 1 NC_012965.1 P-type ATPase, ion transporter of the ER membrane involved in ER function and Ca2+ homeostasis 721968 8199501 PAS_chr3_0368 Pichia pastoris GS115 P-type ATPase, ion transporter of the ER membrane involved in ER function and Ca2+ homeostasis XP_002492591.1 718315 R 644223 CDS PAS_chr3_0369 254570965 8199502 join(722218..722310,722357..723814) 1 NC_012965.1 Protein involved in the inositol acylation of glucosaminyl phosphatidylinositol (GlcN-PI) 723814 8199502 PAS_chr3_0369 Pichia pastoris GS115 Protein involved in the inositol acylation of glucosaminyl phosphatidylinositol (GlcN-PI) XP_002492592.1 722218 D 644223 CDS PAS_chr3_0370 254570967 8199503 complement(724700..726679) 1 NC_012965.1 Alpha-1,2-mannosyltransferase, responsible for addition of the first alpha-1,2-linked mannose 726679 8199503 PAS_chr3_0370 Pichia pastoris GS115 Alpha-1,2-mannosyltransferase, responsible for addition of the first alpha-1,2-linked mannose XP_002492593.1 724700 R 644223 CDS PAS_chr3_0371 254570969 8199504 727363..728514 1 NC_012965.1 Delta(24)-sterol C-methyltransferase 728514 8199504 PAS_chr3_0371 Pichia pastoris GS115 Delta(24)-sterol C-methyltransferase XP_002492594.1 727363 D 644223 CDS PAS_chr3_0372 254570971 8199505 complement(728614..729522) 1 NC_012965.1 Putative vacuolar Fe2+/Mn2+ transporter 729522 8199505 PAS_chr3_0372 Pichia pastoris GS115 Putative vacuolar Fe2+/Mn2+ transporter XP_002492595.1 728614 R 644223 CDS PAS_chr3_0374 254570973 8199506 730544..732433 1 NC_012965.1 hypothetical protein 732433 8199506 PAS_chr3_0374 Pichia pastoris GS115 hypothetical protein XP_002492596.1 730544 D 644223 CDS PAS_chr3_0375 254570975 8199507 complement(732875..734404) 1 NC_012965.1 Cyclin (Bur2p)-dependent protein kinase that functions in transcriptional regulation 734404 8199507 PAS_chr3_0375 Pichia pastoris GS115 Cyclin (Bur2p)-dependent protein kinase that functions in transcriptional regulation XP_002492597.1 732875 R 644223 CDS PAS_chr3_1183 254570977 8199508 complement(734925..735296) 1 NC_012965.1 hypothetical protein 735296 8199508 PAS_chr3_1183 Pichia pastoris GS115 hypothetical protein XP_002492598.1 734925 R 644223 CDS PAS_chr3_0376 254570979 8200215 complement(735564..737525) 1 NC_012965.1 Cytoplasmic and mitochondrial glycyl-tRNA synthase 737525 8200215 PAS_chr3_0376 Pichia pastoris GS115 Cytoplasmic and mitochondrial glycyl-tRNA synthase XP_002492599.1 735564 R 644223 CDS PAS_chr3_1184 254570981 8199509 complement(737866..739095) 1 NC_012965.1 hypothetical protein 739095 8199509 PAS_chr3_1184 Pichia pastoris GS115 hypothetical protein XP_002492600.1 737866 R 644223 CDS PAS_chr3_0377 254570983 8200216 complement(739916..741145) 1 NC_012965.1 Widely conserved NADPH oxidoreductase containing flavin mononucleotide (FMN) 741145 8200216 PAS_chr3_0377 Pichia pastoris GS115 Widely conserved NADPH oxidoreductase containing flavin mononucleotide (FMN) XP_002492601.1 739916 R 644223 CDS PAS_chr3_0378 254570985 8199510 complement(742440..743636) 1 NC_012965.1 Peptidyl-prolyl cis-trans isomerase (cyclophilin) 743636 8199510 PAS_chr3_0378 Pichia pastoris GS115 Peptidyl-prolyl cis-trans isomerase (cyclophilin) XP_002492602.1 742440 R 644223 CDS PAS_chr3_0379 254570987 8199511 743857..745023 1 NC_012965.1 hypothetical protein 745023 8199511 PAS_chr3_0379 Pichia pastoris GS115 hypothetical protein XP_002492603.1 743857 D 644223 CDS PAS_chr3_0380 254570989 8199512 745156..746313 1 NC_012965.1 hypothetical protein 746313 8199512 PAS_chr3_0380 Pichia pastoris GS115 hypothetical protein XP_002492604.1 745156 D 644223 CDS PAS_chr3_0381 254570991 8199513 complement(746353..747144) 1 NC_012965.1 Orotidine-5'-phosphate (OMP) decarboxylase 747144 8199513 PAS_chr3_0381 Pichia pastoris GS115 Orotidine-5'-phosphate (OMP) decarboxylase XP_002492605.1 746353 R 644223 CDS PAS_chr3_0382 254570993 8199514 747315..747578 1 NC_012965.1 Mitochondrial intermembrane space protein 747578 8199514 PAS_chr3_0382 Pichia pastoris GS115 Mitochondrial intermembrane space protein XP_002492606.1 747315 D 644223 CDS PAS_chr3_0383 254570995 8199515 complement(747615..749321) 1 NC_012965.1 hypothetical protein 749321 8199515 PAS_chr3_0383 Pichia pastoris GS115 hypothetical protein XP_002492607.1 747615 R 644223 CDS PAS_chr3_0384 254570997 8199516 749438..750337 1 NC_012965.1 hypothetical protein 750337 8199516 PAS_chr3_0384 Pichia pastoris GS115 hypothetical protein XP_002492608.1 749438 D 644223 CDS PAS_chr3_0385 254570999 8199517 complement(750346..751086) 1 NC_012965.1 3'-to-5' phosphorolytic exoribonuclease that is a subunit of the exosome 751086 8199517 PAS_chr3_0385 Pichia pastoris GS115 3'-to-5' phosphorolytic exoribonuclease that is a subunit of the exosome XP_002492609.1 750346 R 644223 CDS PAS_chr3_0386 254571001 8199518 complement(751239..752480) 1 NC_012965.1 Glycosylphosphatidylinositol-alpha 1,4 mannosyltransferase I 752480 8199518 PAS_chr3_0386 Pichia pastoris GS115 Glycosylphosphatidylinositol-alpha 1,4 mannosyltransferase I XP_002492610.1 751239 R 644223 CDS PAS_chr3_1185 254571003 8199519 complement(752705..753313) 1 NC_012965.1 hypothetical protein 753313 8199519 PAS_chr3_1185 Pichia pastoris GS115 hypothetical protein XP_002492611.1 752705 R 644223 CDS PAS_chr3_0387 254571005 8200217 753542..754069 1 NC_012965.1 Putative protein of unknown function 754069 8200217 PAS_chr3_0387 Pichia pastoris GS115 Putative protein of unknown function XP_002492612.1 753542 D 644223 CDS PAS_chr3_0388 254571007 8199520 754197..755315 1 NC_012965.1 Methionine aminopeptidase 755315 8199520 PAS_chr3_0388 Pichia pastoris GS115 Methionine aminopeptidase XP_002492613.1 754197 D 644223 CDS PAS_chr3_0389 254571009 8199521 755564..756016 1 NC_012965.1 hypothetical protein 756016 8199521 PAS_chr3_0389 Pichia pastoris GS115 hypothetical protein XP_002492614.1 755564 D 644223 CDS PAS_chr3_0390 254571011 8199522 complement(756405..757493) 1 NC_012965.1 Subunit of RAVE (Rav1p, Rav2p, Skp1p) 757493 8199522 PAS_chr3_0390 Pichia pastoris GS115 Subunit of RAVE (Rav1p, Rav2p, Skp1p) XP_002492615.1 756405 R 644223 CDS PAS_chr3_1186 254571013 8199523 757649..761806 1 NC_012965.1 hypothetical protein 761806 8199523 PAS_chr3_1186 Pichia pastoris GS115 hypothetical protein XP_002492616.1 757649 D 644223 CDS PAS_chr3_0391 254571015 8200218 762084..764024 1 NC_012965.1 Catalytic epsilon subunit of the translation initiation factor eIF2B 764024 8200218 PAS_chr3_0391 Pichia pastoris GS115 Catalytic epsilon subunit of the translation initiation factor eIF2B XP_002492617.1 762084 D 644223 CDS PAS_chr3_0392 254571017 8199524 764283..765320 1 NC_012965.1 Putative nucleotide sugar transporter 765320 8199524 PAS_chr3_0392 Pichia pastoris GS115 Putative nucleotide sugar transporter XP_002492618.1 764283 D 644223 CDS PAS_chr3_0393 254571019 8199525 765681..767492 1 NC_012965.1 Transcription factor 767492 8199525 PAS_chr3_0393 Pichia pastoris GS115 Transcription factor XP_002492619.1 765681 D 644223 CDS PAS_chr3_0394 254571021 8199526 767712..769460 1 NC_012965.1 Putative GPI-anchored aspartic protease 769460 8199526 PAS_chr3_0394 Pichia pastoris GS115 Putative GPI-anchored aspartic protease XP_002492620.1 767712 D 644223 CDS PAS_chr3_0395 254571023 8199527 complement(769531..772464) 1 NC_012965.1 hypothetical protein 772464 8199527 PAS_chr3_0395 Pichia pastoris GS115 hypothetical protein XP_002492621.1 769531 R 644223 CDS PAS_chr3_0396 254571025 8199528 772852..774759 1 NC_012965.1 hypothetical protein 774759 8199528 PAS_chr3_0396 Pichia pastoris GS115 hypothetical protein XP_002492622.1 772852 D 644223 CDS PAS_chr3_0397 254571027 8199529 complement(774803..775774) 1 NC_012965.1 Component of the septin ring of the mother-bud neck that is required for cytokinesis 775774 8199529 PAS_chr3_0397 Pichia pastoris GS115 Component of the septin ring of the mother-bud neck that is required for cytokinesis XP_002492623.1 774803 R 644223 CDS PAS_chr3_1187 254571029 8199530 complement(776046..777311) 1 NC_012965.1 hypothetical protein 777311 8199530 PAS_chr3_1187 Pichia pastoris GS115 hypothetical protein XP_002492624.1 776046 R 644223 CDS PAS_chr3_0398 254571031 8200219 complement(777404..779515) 1 NC_012965.1 Translation termination factor eRF3 779515 8200219 PAS_chr3_0398 Pichia pastoris GS115 Translation termination factor eRF3 XP_002492625.1 777404 R 644223 CDS PAS_chr3_0399 254571033 8199531 complement(779590..781059) 1 NC_012965.1 Minor sphingoid long-chain base kinase 781059 8199531 PAS_chr3_0399 Pichia pastoris GS115 Minor sphingoid long-chain base kinase XP_002492626.1 779590 R 644223 CDS PAS_chr3_1188 254571035 8199532 complement(781291..782445) 1 NC_012965.1 hypothetical protein 782445 8199532 PAS_chr3_1188 Pichia pastoris GS115 hypothetical protein XP_002492627.1 781291 R 644223 CDS PAS_chr3_0400 254571037 8200220 complement(782572..783606) 1 NC_012965.1 hypothetical protein 783606 8200220 PAS_chr3_0400 Pichia pastoris GS115 hypothetical protein XP_002492628.1 782572 R 644223 CDS PAS_chr3_0401 254571039 8199533 783718..783906 1 NC_012965.1 hypothetical protein 783906 8199533 PAS_chr3_0401 Pichia pastoris GS115 hypothetical protein XP_002492629.1 783718 D 644223 CDS PAS_chr3_0402 254571041 8199534 784321..786237 1 NC_012965.1 Mitochondrial matrix ATPase 786237 8199534 PAS_chr3_0402 Pichia pastoris GS115 Mitochondrial matrix ATPase XP_002492630.1 784321 D 644223 CDS PAS_chr3_0403 254571043 8199535 complement(786329..788347) 1 NC_012965.1 Acetyl-coA synthetase isoform 788347 8199535 PAS_chr3_0403 Pichia pastoris GS115 Acetyl-coA synthetase isoform XP_002492631.1 786329 R 644223 CDS PAS_chr3_0404 254571045 8199536 complement(789468..790007) 1 NC_012965.1 Putative protein of unknown function 790007 8199536 PAS_chr3_0404 Pichia pastoris GS115 Putative protein of unknown function XP_002492632.1 789468 R 644223 CDS PAS_chr3_0405 254571047 8199537 complement(790186..791286) 1 NC_012965.1 hypothetical protein 791286 8199537 PAS_chr3_0405 Pichia pastoris GS115 hypothetical protein XP_002492633.1 790186 R 644223 CDS PAS_chr3_0406 254571049 8199538 join(791729..791757,791806..792811) 1 NC_012965.1 D-aspartate oxidase 792811 8199538 PAS_chr3_0406 Pichia pastoris GS115 D-aspartate oxidase XP_002492634.1 791729 D 644223 CDS PAS_chr3_0407 254571051 8199539 complement(792918..795731) 1 NC_012965.1 Putative transcription factor containing a zinc finger 795731 8199539 PAS_chr3_0407 Pichia pastoris GS115 Putative transcription factor containing a zinc finger XP_002492635.1 792918 R 644223 CDS PAS_chr3_0408 254571053 8199540 796803..797891 1 NC_012965.1 hypothetical protein 797891 8199540 PAS_chr3_0408 Pichia pastoris GS115 hypothetical protein XP_002492636.1 796803 D 644223 CDS PAS_chr3_0409 254571055 8199541 798138..800768 1 NC_012965.1 Na+/H+ antiporter involved in sodium and potassium efflux through the plasma membrane 800768 8199541 PAS_chr3_0409 Pichia pastoris GS115 Na+/H+ antiporter involved in sodium and potassium efflux through the plasma membrane XP_002492637.1 798138 D 644223 CDS PAS_chr3_0410 254571057 8199542 complement(800865..802169) 1 NC_012965.1 L-ornithine transaminase (OTAse) 802169 8199542 PAS_chr3_0410 Pichia pastoris GS115 L-ornithine transaminase (OTAse) XP_002492638.1 800865 R 644223 CDS PAS_chr3_0411 254571059 8199543 802520..802927 1 NC_012965.1 hypothetical protein 802927 8199543 PAS_chr3_0411 Pichia pastoris GS115 hypothetical protein XP_002492639.1 802520 D 644223 CDS PAS_chr3_0412 254571061 8199544 803200..806157 1 NC_012965.1 hypothetical protein 806157 8199544 PAS_chr3_0412 Pichia pastoris GS115 hypothetical protein XP_002492640.1 803200 D 644223 CDS PAS_chr3_0413 254571063 8199545 complement(806205..806837) 1 NC_012965.1 Protein with a potential role in pre-rRNA processing 806837 8199545 PAS_chr3_0413 Pichia pastoris GS115 Protein with a potential role in pre-rRNA processing XP_002492641.1 806205 R 644223 CDS PAS_chr3_0414 254571065 8199546 807077..808816 1 NC_012965.1 Calcineurin A 808816 8199546 PAS_chr3_0414 Pichia pastoris GS115 Calcineurin A XP_002492642.1 807077 D 644223 CDS PAS_chr3_0415 254571067 8199547 complement(809206..810387) 1 NC_012965.1 hypothetical protein 810387 8199547 PAS_chr3_0415 Pichia pastoris GS115 hypothetical protein XP_002492643.1 809206 R 644223 CDS PAS_chr3_0416 254571069 8199548 810648..811406 1 NC_012965.1 hypothetical protein 811406 8199548 PAS_chr3_0416 Pichia pastoris GS115 hypothetical protein XP_002492644.1 810648 D 644223 CDS PAS_chr3_0417 254571071 8199549 complement(811467..812867) 1 NC_012965.1 Ornithine decarboxylase 812867 8199549 PAS_chr3_0417 Pichia pastoris GS115 Ornithine decarboxylase XP_002492645.1 811467 R 644223 CDS PAS_chr3_0418 254571073 8199550 complement(813667..815250) 1 NC_012965.1 Zinc-finger inhibitor of HO transcription 815250 8199550 PAS_chr3_0418 Pichia pastoris GS115 Zinc-finger inhibitor of HO transcription XP_002492646.1 813667 R 644223 CDS PAS_chr3_0419 254571075 8199551 complement(815861..817465) 1 NC_012965.1 Putative metalloprotease with similarity to the zinc carboxypeptidase family 817465 8199551 PAS_chr3_0419 Pichia pastoris GS115 Putative metalloprotease with similarity to the zinc carboxypeptidase family XP_002492647.1 815861 R 644223 CDS PAS_chr3_0420 254571077 8199552 817643..819919 1 NC_012965.1 hypothetical protein 819919 8199552 PAS_chr3_0420 Pichia pastoris GS115 hypothetical protein XP_002492648.1 817643 D 644223 CDS PAS_chr3_0421 254571079 8199553 complement(819979..822840) 1 NC_012965.1 Member of an oxysterol-binding protein family with seven members in S. cerevisiae 822840 8199553 PAS_chr3_0421 Pichia pastoris GS115 Member of an oxysterol-binding protein family with seven members in S. cerevisiae XP_002492649.1 819979 R 644223 CDS PAS_chr3_0422 254571081 8199554 823588..824601 1 NC_012965.1 hypothetical protein 824601 8199554 PAS_chr3_0422 Pichia pastoris GS115 hypothetical protein XP_002492650.1 823588 D 644223 CDS PAS_chr3_0423 254571083 8199555 824773..826155 1 NC_012965.1 Putative membrane protein of unknown function involved in Mn2+ homeostasis 826155 8199555 PAS_chr3_0423 Pichia pastoris GS115 Putative membrane protein of unknown function involved in Mn2+ homeostasis XP_002492651.1 824773 D 644223 CDS PAS_chr3_0424 254571085 8199556 complement(826169..826657) 1 NC_012965.1 Membrane anchor subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p) 826657 8199556 PAS_chr3_0424 Pichia pastoris GS115 Membrane anchor subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p) XP_002492652.1 826169 R 644223 CDS PAS_chr3_1189 254571087 8199557 complement(826863..828722) 1 NC_012965.1 hypothetical protein 828722 8199557 PAS_chr3_1189 Pichia pastoris GS115 hypothetical protein XP_002492653.1 826863 R 644223 CDS PAS_chr3_0425 254571089 8200221 829742..830800 1 NC_012965.1 Sphinganine C4-hydroxylase 830800 8200221 PAS_chr3_0425 Pichia pastoris GS115 Sphinganine C4-hydroxylase XP_002492654.1 829742 D 644223 CDS PAS_chr3_0426 254571091 8199558 complement(830888..831502) 1 NC_012965.1 Protein involved in homologous recombination in mitochondria and in transcription regulation in nucl 831502 8199558 PAS_chr3_0426 Pichia pastoris GS115 Protein involved in homologous recombination in mitochondria and in transcription regulation in nucl XP_002492655.1 830888 R 644223 CDS PAS_chr3_0427 254571093 8199559 complement(831663..833261) 1 NC_012965.1 hypothetical protein 833261 8199559 PAS_chr3_0427 Pichia pastoris GS115 hypothetical protein XP_002492656.1 831663 R 644223 CDS PAS_chr3_0428 254571095 8199560 complement(834712..835011) 1 NC_012965.1 Protein required for cytochrome c oxidase assembly 835011 8199560 PAS_chr3_0428 Pichia pastoris GS115 Protein required for cytochrome c oxidase assembly XP_002492657.1 834712 R 644223 CDS PAS_chr3_1190 254571097 8199561 join(835261..835293,835354..835488) 1 NC_012965.1 hypothetical protein 835488 8199561 PAS_chr3_1190 Pichia pastoris GS115 hypothetical protein XP_002492658.1 835261 D 644223 CDS PAS_chr3_0429 254571099 8200222 835801..836718 1 NC_012965.1 Protein required for transport of flavin adenine dinucleotide (FAD) 836718 8200222 PAS_chr3_0429 Pichia pastoris GS115 Protein required for transport of flavin adenine dinucleotide (FAD) XP_002492659.1 835801 D 644223 CDS PAS_chr3_0431 254571101 8199562 complement(838189..839649) 1 NC_012965.1 Subunit of the Nsp1p-Nup57p-Nup49p-Nic96p subcomplex of the nuclear pore complex (NPC) 839649 8199562 PAS_chr3_0431 Pichia pastoris GS115 Subunit of the Nsp1p-Nup57p-Nup49p-Nic96p subcomplex of the nuclear pore complex (NPC) XP_002492660.1 838189 R 644223 CDS PAS_chr3_0432 254571103 8199563 839909..844264 1 NC_012965.1 Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic processing (P) bodies 844264 8199563 PAS_chr3_0432 Pichia pastoris GS115 Evolutionarily-conserved 5'-3' exonuclease component of cytoplasmic processing (P) bodies XP_002492661.1 839909 D 644223 CDS PAS_chr3_0433 254571105 8199564 complement(844334..844885) 1 NC_012965.1 Subunit of the RES complex 844885 8199564 PAS_chr3_0433 Pichia pastoris GS115 Subunit of the RES complex XP_002492662.1 844334 R 644223 CDS PAS_chr3_0434 254571107 8199565 join(845551..845681,845956..847927) 1 NC_012965.1 Mitochondrial amino acid transporter 847927 8199565 PAS_chr3_0434 Pichia pastoris GS115 Mitochondrial amino acid transporter XP_002492663.1 845551 D 644223 CDS PAS_chr3_0435 254571109 8199566 complement(847996..849114) 1 NC_012965.1 hypothetical protein 849114 8199566 PAS_chr3_0435 Pichia pastoris GS115 hypothetical protein XP_002492664.1 847996 R 644223 CDS PAS_chr3_0436 254571111 8199567 complement(849187..851832) 1 NC_012965.1 Putative protein of unknown function 851832 8199567 PAS_chr3_0436 Pichia pastoris GS115 Putative protein of unknown function XP_002492665.1 849187 R 644223 CDS PAS_chr3_0438 254571113 8199568 853612..855378 1 NC_012965.1 Member of the PUF protein family, which is defined by the presence of Pumilio homology domains 855378 8199568 PAS_chr3_0438 Pichia pastoris GS115 Member of the PUF protein family, which is defined by the presence of Pumilio homology domains XP_002492666.1 853612 D 644223 CDS PAS_chr3_0440 254571115 8199569 856281..857939 1 NC_012965.1 Lactate transporter 857939 8199569 PAS_chr3_0440 Pichia pastoris GS115 Lactate transporter XP_002492667.1 856281 D 644223 CDS PAS_chr3_0442 254571117 8199570 859462..859935 1 NC_012965.1 Lsm (Like Sm) protein 859935 8199570 PAS_chr3_0442 Pichia pastoris GS115 Lsm (Like Sm) protein XP_002492668.1 859462 D 644223 CDS PAS_chr3_0443 254571119 8199571 860100..861197 1 NC_012965.1 Subunit of tRNA (1-methyladenosine) methyltransferase 861197 8199571 PAS_chr3_0443 Pichia pastoris GS115 Subunit of tRNA (1-methyladenosine) methyltransferase XP_002492669.1 860100 D 644223 CDS PAS_chr3_0444 254571121 8199572 complement(861204..862121) 1 NC_012965.1 hypothetical protein 862121 8199572 PAS_chr3_0444 Pichia pastoris GS115 hypothetical protein XP_002492670.1 861204 R 644223 CDS PAS_chr3_0445 254571123 8199573 862254..863105 1 NC_012965.1 hypothetical protein 863105 8199573 PAS_chr3_0445 Pichia pastoris GS115 hypothetical protein XP_002492671.1 862254 D 644223 CDS PAS_chr3_0446 254571125 8199574 complement(863723..864787) 1 NC_012965.1 Putative dihydrokaempferol 4-reductase 864787 8199574 PAS_chr3_0446 Pichia pastoris GS115 Putative dihydrokaempferol 4-reductase XP_002492672.1 863723 R 644223 CDS PAS_chr3_0447 254571127 8199575 complement(866032..867096) 1 NC_012965.1 Putative dihydrokaempferol 4-reductase 867096 8199575 PAS_chr3_0447 Pichia pastoris GS115 Putative dihydrokaempferol 4-reductase XP_002492673.1 866032 R 644223 CDS PAS_chr3_0448 254571129 8199576 complement(867597..868661) 1 NC_012965.1 Putative dihydrokaempferol 4-reductase 868661 8199576 PAS_chr3_0448 Pichia pastoris GS115 Putative dihydrokaempferol 4-reductase XP_002492674.1 867597 R 644223 CDS PAS_chr3_0449 254571131 8199577 complement(869184..870248) 1 NC_012965.1 Putative dihydrokaempferol 4-reductase 870248 8199577 PAS_chr3_0449 Pichia pastoris GS115 Putative dihydrokaempferol 4-reductase XP_002492675.1 869184 R 644223 CDS PAS_chr3_0450 254571133 8199578 complement(join(870572..871298,871348..871382)) 1 NC_012965.1 Alpha 4 subunit of the 20S proteasome 871382 8199578 PAS_chr3_0450 Pichia pastoris GS115 Alpha 4 subunit of the 20S proteasome XP_002492676.1 870572 R 644223 CDS PAS_chr3_0451 254571135 8199579 complement(872015..872434) 1 NC_012965.1 Mitochondrial outer membrane protein 872434 8199579 PAS_chr3_0451 Pichia pastoris GS115 Mitochondrial outer membrane protein XP_002492677.1 872015 R 644223 CDS PAS_chr3_0452 254571137 8199580 872702..874414 1 NC_012965.1 Sensor of mitochondrial dysfunction 874414 8199580 PAS_chr3_0452 Pichia pastoris GS115 Sensor of mitochondrial dysfunction XP_002492678.1 872702 D 644223 CDS PAS_chr3_0453 254571139 8199581 874605..876773 1 NC_012965.1 Subunit (90 kDa) of TFIID and SAGA complexes 876773 8199581 PAS_chr3_0453 Pichia pastoris GS115 Subunit (90 kDa) of TFIID and SAGA complexes XP_002492679.1 874605 D 644223 CDS PAS_chr3_0454 254571141 8199582 complement(876797..877660) 1 NC_012965.1 hypothetical protein 877660 8199582 PAS_chr3_0454 Pichia pastoris GS115 hypothetical protein XP_002492680.1 876797 R 644223 CDS PAS_chr3_0455 254571143 8199583 877889..878200 1 NC_012965.1 hypothetical protein 878200 8199583 PAS_chr3_0455 Pichia pastoris GS115 hypothetical protein XP_002492681.1 877889 D 644223 CDS PAS_chr3_0456 254571145 8199584 878576..880258 1 NC_012965.1 Glycolytic enzyme phosphoglucose isomerase 880258 8199584 PAS_chr3_0456 Pichia pastoris GS115 Glycolytic enzyme phosphoglucose isomerase XP_002492682.1 878576 D 644223 CDS PAS_chr3_1191 254571147 8199585 880411..881640 1 NC_012965.1 hypothetical protein 881640 8199585 PAS_chr3_1191 Pichia pastoris GS115 hypothetical protein XP_002492683.1 880411 D 644223 CDS PAS_chr3_0457 254571149 8200223 complement(881649..882854) 1 NC_012965.1 Essential, non-ATPase regulatory subunit of the 26S proteasome 882854 8200223 PAS_chr3_0457 Pichia pastoris GS115 Essential, non-ATPase regulatory subunit of the 26S proteasome XP_002492684.1 881649 R 644223 CDS PAS_chr3_1192 254571151 8199586 join(883230..883268,883335..884762) 1 NC_012965.1 hypothetical protein 884762 8199586 PAS_chr3_1192 Pichia pastoris GS115 hypothetical protein XP_002492685.1 883230 D 644223 CDS PAS_chr3_0458 254571153 8200224 join(884875..884890,885048..886195) 1 NC_012965.1 Essential component of the Arp2/3 complex 886195 8200224 PAS_chr3_0458 Pichia pastoris GS115 Essential component of the Arp2/3 complex XP_002492686.1 884875 D 644223 CDS PAS_chr3_0459 254571155 8199587 complement(886269..887993) 1 NC_012965.1 Dual-specificity kinase 887993 8199587 PAS_chr3_0459 Pichia pastoris GS115 Dual-specificity kinase XP_002492687.1 886269 R 644223 CDS PAS_chr3_0460 254571157 8199588 888430..889128 1 NC_012965.1 Subunit b of the stator stalk of mitochondrial F1F0 ATP synthase 889128 8199588 PAS_chr3_0460 Pichia pastoris GS115 Subunit b of the stator stalk of mitochondrial F1F0 ATP synthase XP_002492688.1 888430 D 644223 CDS PAS_chr3_0461 254571159 8199589 complement(889189..889497) 1 NC_012965.1 hypothetical protein 889497 8199589 PAS_chr3_0461 Pichia pastoris GS115 hypothetical protein XP_002492689.1 889189 R 644223 CDS PAS_chr3_0462 254571161 8199590 889696..892641 1 NC_012965.1 Cytoplasmic alanyl-tRNA synthetase 892641 8199590 PAS_chr3_0462 Pichia pastoris GS115 Cytoplasmic alanyl-tRNA synthetase XP_002492690.1 889696 D 644223 CDS PAS_chr3_0463 254571163 8199591 892906..893973 1 NC_012965.1 hypothetical protein 893973 8199591 PAS_chr3_0463 Pichia pastoris GS115 hypothetical protein XP_002492691.1 892906 D 644223 CDS PAS_chr3_0464 254571165 8199592 complement(893999..895111) 1 NC_012965.1 Putative protein of unknown function 895111 8199592 PAS_chr3_0464 Pichia pastoris GS115 Putative protein of unknown function XP_002492692.1 893999 R 644223 CDS PAS_chr3_0465 254571167 8199593 complement(895426..895968) 1 NC_012965.1 Mitochondrial ribosomal protein of the large subunit 895968 8199593 PAS_chr3_0465 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002492693.1 895426 R 644223 CDS PAS_chr3_0466 254571169 8199594 complement(896113..896922) 1 NC_012965.1 Protein involved in bud-site selection 896922 8199594 PAS_chr3_0466 Pichia pastoris GS115 Protein involved in bud-site selection XP_002492694.1 896113 R 644223 CDS PAS_chr3_0467 254571171 8199595 897081..898661 1 NC_012965.1 Acyl-CoA:sterol acyltransferase, isozyme of Are1p 898661 8199595 PAS_chr3_0467 Pichia pastoris GS115 Acyl-CoA:sterol acyltransferase, isozyme of Are1p XP_002492695.1 897081 D 644223 CDS PAS_chr3_0468 254571173 8199596 complement(898697..899365) 1 NC_012965.1 Putative metalloprotease of the mitochondrial inner membrane 899365 8199596 PAS_chr3_0468 Pichia pastoris GS115 Putative metalloprotease of the mitochondrial inner membrane XP_002492696.1 898697 R 644223 CDS PAS_chr3_0469 254571175 8199597 join(900140..900209,900259..902333) 1 NC_012965.1 signal transducing MEK kinase 902333 8199597 PAS_chr3_0469 Pichia pastoris GS115 signal transducing MEK kinase XP_002492697.1 900140 D 644223 CDS PAS_chr3_0470 254571177 8199598 complement(902330..903103) 1 NC_012965.1 hypothetical protein 903103 8199598 PAS_chr3_0470 Pichia pastoris GS115 hypothetical protein XP_002492698.1 902330 R 644223 CDS PAS_chr3_0471 254571179 8199599 903300..904370 1 NC_012965.1 Aspartic beta semi-aldehyde dehydrogenase 904370 8199599 PAS_chr3_0471 Pichia pastoris GS115 Aspartic beta semi-aldehyde dehydrogenase XP_002492699.1 903300 D 644223 CDS PAS_chr3_0472 254571181 8199600 complement(904425..905099) 1 NC_012965.1 hypothetical protein 905099 8199600 PAS_chr3_0472 Pichia pastoris GS115 hypothetical protein XP_002492700.1 904425 R 644223 CDS PAS_chr3_0473 254571183 8199601 905336..905698 1 NC_012965.1 hypothetical protein 905698 8199601 PAS_chr3_0473 Pichia pastoris GS115 hypothetical protein XP_002492701.1 905336 D 644223 CDS PAS_chr3_0474 254571185 8199602 905867..906688 1 NC_012965.1 Mitochondrial ribosomal protein of the large subunit 906688 8199602 PAS_chr3_0474 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002492702.1 905867 D 644223 CDS PAS_chr3_0475 254571187 8199603 906864..908342 1 NC_012965.1 Transmembrane protein subunit of the glycosylphosphatidylinositol transamidase complex 908342 8199603 PAS_chr3_0475 Pichia pastoris GS115 Transmembrane protein subunit of the glycosylphosphatidylinositol transamidase complex XP_002492703.1 906864 D 644223 CDS PAS_chr3_0476 254571189 8199604 complement(908374..910074) 1 NC_012965.1 Protein of unknown function that associates with ribosomes 910074 8199604 PAS_chr3_0476 Pichia pastoris GS115 Protein of unknown function that associates with ribosomes XP_002492704.1 908374 R 644223 CDS PAS_chr3_0477 254571191 8199605 910242..912089 1 NC_012965.1 hypothetical protein 912089 8199605 PAS_chr3_0477 Pichia pastoris GS115 hypothetical protein XP_002492705.1 910242 D 644223 CDS PAS_chr3_0478 254571193 8199606 complement(912099..913067) 1 NC_012965.1 hypothetical protein 913067 8199606 PAS_chr3_0478 Pichia pastoris GS115 hypothetical protein XP_002492706.1 912099 R 644223 CDS PAS_chr3_0479 254571195 8199607 913094..913837 1 NC_012965.1 hypothetical protein 913837 8199607 PAS_chr3_0479 Pichia pastoris GS115 hypothetical protein XP_002492707.1 913094 D 644223 CDS PAS_chr3_0480 254571197 8199608 complement(join(913879..914740,914802..915109)) 1 NC_012965.1 Putative chaperone, homolog of E. coli DnaJ, closely related to Ydj1p 915109 8199608 PAS_chr3_0480 Pichia pastoris GS115 Putative chaperone, homolog of E. coli DnaJ, closely related to Ydj1p XP_002492708.1 913879 R 644223 CDS PAS_chr3_0482 254571199 8199609 915864..917396 1 NC_012965.1 Putative alanine transaminase (glutamic pyruvic transaminase) 917396 8199609 PAS_chr3_0482 Pichia pastoris GS115 Putative alanine transaminase (glutamic pyruvic transaminase) XP_002492709.1 915864 D 644223 CDS PAS_chr3_1193 254571201 8199610 917546..918301 1 NC_012965.1 hypothetical protein 918301 8199610 PAS_chr3_1193 Pichia pastoris GS115 hypothetical protein XP_002492710.1 917546 D 644223 CDS PAS_chr3_0483 254571203 8200225 complement(918357..919766) 1 NC_012965.1 Conserved phosphoesterase domain-containing protein 919766 8200225 PAS_chr3_0483 Pichia pastoris GS115 Conserved phosphoesterase domain-containing protein XP_002492711.1 918357 R 644223 CDS PAS_chr3_0484 254571205 8199611 complement(919911..922289) 1 NC_012965.1 Putative protein of unknown function 922289 8199611 PAS_chr3_0484 Pichia pastoris GS115 Putative protein of unknown function XP_002492712.1 919911 R 644223 CDS PAS_chr3_0485 254571207 8199612 922552..923895 1 NC_012965.1 Cytoplasmic protein required for cytoplasm to vacuole targeting of proteins 923895 8199612 PAS_chr3_0485 Pichia pastoris GS115 Cytoplasmic protein required for cytoplasm to vacuole targeting of proteins XP_002492713.1 922552 D 644223 CDS PAS_chr3_0486 254571209 8199994 complement(923950..925356) 1 NC_012965.1 hypothetical protein 925356 8199994 PAS_chr3_0486 Pichia pastoris GS115 hypothetical protein XP_002492714.1 923950 R 644223 CDS PAS_chr3_0488 254571211 8199858 926526..930008 1 NC_012965.1 Bud-specific protein with a potential role in membrane trafficking 930008 8199858 PAS_chr3_0488 Pichia pastoris GS115 Bud-specific protein with a potential role in membrane trafficking XP_002492715.1 926526 D 644223 CDS PAS_chr3_1194 254571213 8199859 930166..931545 1 NC_012965.1 hypothetical protein 931545 8199859 PAS_chr3_1194 Pichia pastoris GS115 hypothetical protein XP_002492716.1 930166 D 644223 CDS PAS_chr3_0489 254571215 8200226 931826..934387 1 NC_012965.1 High affinity sulfate permease 934387 8200226 PAS_chr3_0489 Pichia pastoris GS115 High affinity sulfate permease XP_002492717.1 931826 D 644223 CDS PAS_chr3_0490 254571217 8199860 complement(934468..937152) 1 NC_012965.1 Zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type 937152 8199860 PAS_chr3_0490 Pichia pastoris GS115 Zinc-finger transcription factor of the Zn(2)-Cys(6) binuclear cluster domain type XP_002492718.1 934468 R 644223 CDS PAS_chr3_0492 254571219 8199861 join(938969..939053,939097..939356) 1 NC_012965.1 hypothetical protein 939356 8199861 PAS_chr3_0492 Pichia pastoris GS115 hypothetical protein XP_002492719.1 938969 D 644223 CDS PAS_chr3_0493 254571221 8199862 940342..942600 1 NC_012965.1 hypothetical protein 942600 8199862 PAS_chr3_0493 Pichia pastoris GS115 hypothetical protein XP_002492720.1 940342 D 644223 CDS PAS_chr3_0494 254571223 8199863 complement(942872..943639) 1 NC_012965.1 hypothetical protein 943639 8199863 PAS_chr3_0494 Pichia pastoris GS115 hypothetical protein XP_002492721.1 942872 R 644223 CDS PAS_chr3_0495 254571225 8199864 944090..946534 1 NC_012965.1 Low-affinity phosphate transporter of the vacuolar membrane 946534 8199864 PAS_chr3_0495 Pichia pastoris GS115 Low-affinity phosphate transporter of the vacuolar membrane XP_002492722.1 944090 D 644223 CDS PAS_chr3_0496 254571227 8199865 946671..949340 1 NC_012965.1 RNA-dependent ATPase in the DEAH-box family 949340 8199865 PAS_chr3_0496 Pichia pastoris GS115 RNA-dependent ATPase in the DEAH-box family XP_002492723.1 946671 D 644223 CDS PAS_chr3_0497 254571229 8199866 949500..951038 1 NC_012965.1 hypothetical protein 951038 8199866 PAS_chr3_0497 Pichia pastoris GS115 hypothetical protein XP_002492724.1 949500 D 644223 CDS PAS_chr3_0498 254571231 8199867 complement(951020..952141) 1 NC_012965.1 Actin-associated protein 952141 8199867 PAS_chr3_0498 Pichia pastoris GS115 Actin-associated protein XP_002492725.1 951020 R 644223 CDS PAS_chr3_0499 254571233 8199868 complement(952246..954486) 1 NC_012965.1 hypothetical protein 954486 8199868 PAS_chr3_0499 Pichia pastoris GS115 hypothetical protein XP_002492726.1 952246 R 644223 CDS PAS_chr3_0500 254571235 8199869 955489..955899 1 NC_012965.1 hypothetical protein 955899 8199869 PAS_chr3_0500 Pichia pastoris GS115 hypothetical protein XP_002492727.1 955489 D 644223 CDS PAS_chr3_0501 254571237 8199870 complement(955906..956580) 1 NC_012965.1 hypothetical protein 956580 8199870 PAS_chr3_0501 Pichia pastoris GS115 hypothetical protein XP_002492728.1 955906 R 644223 CDS PAS_chr3_0503 254571239 8199871 complement(959753..962482) 1 NC_012965.1 Zinc finger transcriptional activator of the Zn2Cys6 family 962482 8199871 PAS_chr3_0503 Pichia pastoris GS115 Zinc finger transcriptional activator of the Zn2Cys6 family XP_002492729.1 959753 R 644223 CDS PAS_chr3_1195 254571241 8199872 complement(962741..964078) 1 NC_012965.1 hypothetical protein 964078 8199872 PAS_chr3_1195 Pichia pastoris GS115 hypothetical protein XP_002492730.1 962741 R 644223 CDS PAS_chr3_0504 254571243 8200227 964689..966506 1 NC_012965.1 hypothetical protein 966506 8200227 PAS_chr3_0504 Pichia pastoris GS115 hypothetical protein XP_002492731.1 964689 D 644223 CDS PAS_chr3_0505 254571245 8199873 complement(966731..967804) 1 NC_012965.1 Putative protein of unknown function 967804 8199873 PAS_chr3_0505 Pichia pastoris GS115 Putative protein of unknown function XP_002492732.1 966731 R 644223 CDS PAS_chr3_0506 254571247 8199874 complement(968316..972953) 1 NC_012965.1 Pentafunctional arom protein 972953 8199874 PAS_chr3_0506 Pichia pastoris GS115 Pentafunctional arom protein XP_002492733.1 968316 R 644223 CDS PAS_chr3_0507 254571249 8199875 973556..975142 1 NC_012965.1 C-22 sterol desaturase 975142 8199875 PAS_chr3_0507 Pichia pastoris GS115 C-22 sterol desaturase XP_002492734.1 973556 D 644223 CDS PAS_chr3_1196 254571251 8199876 975322..976050 1 NC_012965.1 hypothetical protein 976050 8199876 PAS_chr3_1196 Pichia pastoris GS115 hypothetical protein XP_002492735.1 975322 D 644223 CDS PAS_chr3_0508 254571253 8199856 976303..977859 1 NC_012965.1 Specificity factor required for Rsp5p-dependent ubiquitination and sorting of cargo proteins 977859 8199856 PAS_chr3_0508 Pichia pastoris GS115 Specificity factor required for Rsp5p-dependent ubiquitination and sorting of cargo proteins XP_002492736.1 976303 D 644223 CDS PAS_chr3_0509 254571255 8199877 complement(977912..978367) 1 NC_012965.1 hypothetical protein 978367 8199877 PAS_chr3_0509 Pichia pastoris GS115 hypothetical protein XP_002492737.1 977912 R 644223 CDS PAS_chr3_0510 254571257 8199878 complement(978520..980196) 1 NC_012965.1 hypothetical protein 980196 8199878 PAS_chr3_0510 Pichia pastoris GS115 hypothetical protein XP_002492738.1 978520 R 644223 CDS PAS_chr3_0511 254571259 8199879 981002..982627 1 NC_012965.1 Choline/ethanolamine transporter 982627 8199879 PAS_chr3_0511 Pichia pastoris GS115 Choline/ethanolamine transporter XP_002492739.1 981002 D 644223 CDS PAS_chr3_0512 254571261 8199880 complement(982679..985006) 1 NC_012965.1 hypothetical protein 985006 8199880 PAS_chr3_0512 Pichia pastoris GS115 hypothetical protein XP_002492740.1 982679 R 644223 CDS PAS_chr3_0513 254571263 8199881 complement(985144..986013) 1 NC_012965.1 hypothetical protein 986013 8199881 PAS_chr3_0513 Pichia pastoris GS115 hypothetical protein XP_002492741.1 985144 R 644223 CDS PAS_chr3_0514 254571265 8199882 986189..987733 1 NC_012965.1 hypothetical protein 987733 8199882 PAS_chr3_0514 Pichia pastoris GS115 hypothetical protein XP_002492742.1 986189 D 644223 CDS PAS_chr3_0515 254571267 8199883 987936..989324 1 NC_012965.1 Subunit of the alpha-1,6 mannosyltransferase complex 989324 8199883 PAS_chr3_0515 Pichia pastoris GS115 Subunit of the alpha-1,6 mannosyltransferase complex XP_002492743.1 987936 D 644223 CDS PAS_chr3_0516 254571269 8199884 complement(989382..990959) 1 NC_012965.1 High-affinity zinc transporter of the plasma membrane 990959 8199884 PAS_chr3_0516 Pichia pastoris GS115 High-affinity zinc transporter of the plasma membrane XP_002492744.1 989382 R 644223 CDS PAS_chr3_0517 254571271 8199885 991518..992378 1 NC_012965.1 Putative GPI-anchored protein 992378 8199885 PAS_chr3_0517 Pichia pastoris GS115 Putative GPI-anchored protein XP_002492745.1 991518 D 644223 CDS PAS_chr3_0518 254571273 8199886 complement(992433..995300) 1 NC_012965.1 Predicted cytoskeleton protein 995300 8199886 PAS_chr3_0518 Pichia pastoris GS115 Predicted cytoskeleton protein XP_002492746.1 992433 R 644223 CDS PAS_chr3_0519 254571275 8199887 complement(995755..997416) 1 NC_012965.1 Permease of basic amino acids in the vacuolar membrane 997416 8199887 PAS_chr3_0519 Pichia pastoris GS115 Permease of basic amino acids in the vacuolar membrane XP_002492747.1 995755 R 644223 CDS PAS_chr3_0520 254571277 8199888 join(997770..997820,997887..998201) 1 NC_012965.1 Putative mitochondrial ribosomal protein of the small subunit 998201 8199888 PAS_chr3_0520 Pichia pastoris GS115 Putative mitochondrial ribosomal protein of the small subunit XP_002492748.1 997770 D 644223 CDS PAS_chr3_0521 254571279 8199889 998380..999450 1 NC_012965.1 Protein involved in ubiquitin ligation 999450 8199889 PAS_chr3_0521 Pichia pastoris GS115 Protein involved in ubiquitin ligation XP_002492749.1 998380 D 644223 CDS PAS_chr3_0522 254571281 8199890 complement(999484..1001181) 1 NC_012965.1 Putative protein of unknown function 1001181 8199890 PAS_chr3_0522 Pichia pastoris GS115 Putative protein of unknown function XP_002492750.1 999484 R 644223 CDS PAS_chr3_0523 254571283 8199891 1001488..1006098 1 NC_012965.1 Putative protein of unknown function 1006098 8199891 PAS_chr3_0523 Pichia pastoris GS115 Putative protein of unknown function XP_002492751.1 1001488 D 644223 CDS PAS_chr3_0524 254571285 8199892 complement(1006081..1008981) 1 NC_012965.1 Essential component of the nuclear pore complex 1008981 8199892 PAS_chr3_0524 Pichia pastoris GS115 Essential component of the nuclear pore complex XP_002492752.1 1006081 R 644223 CDS PAS_chr3_0525 254571287 8199893 join(1009271..1009304,1009373..1009575) 1 NC_012965.1 hypothetical protein 1009575 8199893 PAS_chr3_0525 Pichia pastoris GS115 hypothetical protein XP_002492753.1 1009271 D 644223 CDS PAS_chr3_0526 254571289 8199894 complement(1009703..1010833) 1 NC_012965.1 Protein with a role in regulation of Ty1 transposition 1010833 8199894 PAS_chr3_0526 Pichia pastoris GS115 Protein with a role in regulation of Ty1 transposition XP_002492754.1 1009703 R 644223 CDS PAS_chr3_0527 254571291 8199895 1012015..1013700 1 NC_012965.1 hypothetical protein 1013700 8199895 PAS_chr3_0527 Pichia pastoris GS115 hypothetical protein XP_002492755.1 1012015 D 644223 CDS PAS_chr3_0528 254571293 8199896 1014737..1016071 1 NC_012965.1 Saccharopine dehydrogenase (NADP+, L-glutamate-forming) 1016071 8199896 PAS_chr3_0528 Pichia pastoris GS115 Saccharopine dehydrogenase (NADP+, L-glutamate-forming) XP_002492756.1 1014737 D 644223 CDS PAS_chr3_0529 254571295 8199897 1016212..1016790 1 NC_012965.1 hypothetical protein 1016790 8199897 PAS_chr3_0529 Pichia pastoris GS115 hypothetical protein XP_002492757.1 1016212 D 644223 CDS PAS_chr3_0530 254571297 8199898 1017446..1018756 1 NC_012965.1 hypothetical protein 1018756 8199898 PAS_chr3_0530 Pichia pastoris GS115 hypothetical protein XP_002492758.1 1017446 D 644223 CDS PAS_chr3_0531 254571299 8199899 complement(1018895..1020238) 1 NC_012965.1 GDP dissociation inhibitor 1020238 8199899 PAS_chr3_0531 Pichia pastoris GS115 GDP dissociation inhibitor XP_002492759.1 1018895 R 644223 CDS PAS_chr3_0532 254571301 8199900 1020626..1023652 1 NC_012965.1 Intermediate filament protein 1023652 8199900 PAS_chr3_0532 Pichia pastoris GS115 Intermediate filament protein XP_002492760.1 1020626 D 644223 CDS PAS_chr3_0533 254571303 8199901 complement(1023714..1024643) 1 NC_012965.1 hypothetical protein 1024643 8199901 PAS_chr3_0533 Pichia pastoris GS115 hypothetical protein XP_002492761.1 1023714 R 644223 CDS PAS_chr3_0534 254571305 8199902 1024813..1025625 1 NC_012965.1 Subunit of the signal recognition particle (SRP), involved in protein targeting to the ER 1025625 8199902 PAS_chr3_0534 Pichia pastoris GS115 Subunit of the signal recognition particle (SRP), involved in protein targeting to the ER XP_002492762.1 1024813 D 644223 CDS PAS_chr3_1197 254571307 8199903 complement(1025661..1026326) 1 NC_012965.1 hypothetical protein 1026326 8199903 PAS_chr3_1197 Pichia pastoris GS115 hypothetical protein XP_002492763.1 1025661 R 644223 CDS PAS_chr3_0535 254571309 8199635 complement(1026475..1027626) 1 NC_012965.1 Sphingolipid alpha-hydroxylase 1027626 8199635 PAS_chr3_0535 Pichia pastoris GS115 Sphingolipid alpha-hydroxylase XP_002492764.1 1026475 R 644223 CDS PAS_chr3_0536 254571311 8199904 complement(1027812..1029632) 1 NC_012965.1 hypothetical protein 1029632 8199904 PAS_chr3_0536 Pichia pastoris GS115 hypothetical protein XP_002492765.1 1027812 R 644223 CDS PAS_chr3_0537 254571313 8199905 1029836..1031062 1 NC_012965.1 Peripheral mitochondrial membrane protein involved in mitochondrial protein import 1031062 8199905 PAS_chr3_0537 Pichia pastoris GS115 Peripheral mitochondrial membrane protein involved in mitochondrial protein import XP_002492766.1 1029836 D 644223 CDS PAS_chr3_0538 254571315 8199906 complement(1031185..1034520) 1 NC_012965.1 Ubiquitin-protein ligase of the ER/nuclear envelope 1034520 8199906 PAS_chr3_0538 Pichia pastoris GS115 Ubiquitin-protein ligase of the ER/nuclear envelope XP_002492767.1 1031185 R 644223 CDS PAS_chr3_0540 254571317 8199907 1035243..1038209 1 NC_012965.1 Subunit of the cohesin complex 1038209 8199907 PAS_chr3_0540 Pichia pastoris GS115 Subunit of the cohesin complex XP_002492768.1 1035243 D 644223 CDS PAS_chr3_0541 254571319 8199908 1038333..1038734 1 NC_012965.1 hypothetical protein 1038734 8199908 PAS_chr3_0541 Pichia pastoris GS115 hypothetical protein XP_002492769.1 1038333 D 644223 CDS PAS_chr3_0543 254571321 8199909 complement(1039698..1041011) 1 NC_012965.1 Zinc transporter 1041011 8199909 PAS_chr3_0543 Pichia pastoris GS115 Zinc transporter XP_002492770.1 1039698 R 644223 CDS PAS_chr3_0544 254571323 8199910 complement(1041196..1042977) 1 NC_012965.1 Component of the RSC chromatin remodeling complex 1042977 8199910 PAS_chr3_0544 Pichia pastoris GS115 Component of the RSC chromatin remodeling complex XP_002492771.1 1041196 R 644223 CDS PAS_chr3_0545 254571325 8199911 1043153..1045570 1 NC_012965.1 Putative ATPase containing the DEAD/H helicase-related sequence motif 1045570 8199911 PAS_chr3_0545 Pichia pastoris GS115 Putative ATPase containing the DEAD/H helicase-related sequence motif XP_002492772.1 1043153 D 644223 CDS PAS_chr3_0546 254571327 8199912 1045920..1047128 1 NC_012965.1 Regulatory subunit of the cyclic AMP-dependent protein kinase (PKA) 1047128 8199912 PAS_chr3_0546 Pichia pastoris GS115 Regulatory subunit of the cyclic AMP-dependent protein kinase (PKA) XP_002492773.1 1045920 D 644223 CDS PAS_chr3_0547 254571329 8199913 complement(1047200..1047628) 1 NC_012965.1 Endoplasmic reticulum membrane protein 1047628 8199913 PAS_chr3_0547 Pichia pastoris GS115 Endoplasmic reticulum membrane protein XP_002492774.1 1047200 R 644223 CDS PAS_chr3_0548 254571331 8199914 complement(1047779..1048624) 1 NC_012965.1 Beta subunit of the capping protein (CP) heterodimer (Cap1p and Cap2p) 1048624 8199914 PAS_chr3_0548 Pichia pastoris GS115 Beta subunit of the capping protein (CP) heterodimer (Cap1p and Cap2p) XP_002492775.1 1047779 R 644223 CDS PAS_chr3_0549 254571333 8199915 1048880..1049875 1 NC_012965.1 Alpha' catalytic subunit of casein kinase 2 1049875 8199915 PAS_chr3_0549 Pichia pastoris GS115 Alpha' catalytic subunit of casein kinase 2 XP_002492776.1 1048880 D 644223 CDS PAS_chr3_1198 254571335 8199916 complement(1049879..1050571) 1 NC_012965.1 hypothetical protein 1050571 8199916 PAS_chr3_1198 Pichia pastoris GS115 hypothetical protein XP_002492777.1 1049879 R 644223 CDS PAS_chr3_0550 254571337 8199636 complement(1050991..1051767) 1 NC_012965.1 Meiosis-specific protein of unknown function, required for spore wall formation during sporulation 1051767 8199636 PAS_chr3_0550 Pichia pastoris GS115 Meiosis-specific protein of unknown function, required for spore wall formation during sporulation XP_002492778.1 1050991 R 644223 CDS PAS_chr3_0551 254571339 8199917 1052002..1053717 1 NC_012965.1 Vacuolar membrane protein of unknown function 1053717 8199917 PAS_chr3_0551 Pichia pastoris GS115 Vacuolar membrane protein of unknown function XP_002492779.1 1052002 D 644223 CDS PAS_chr3_0552 254571341 8199918 complement(1053781..1054773) 1 NC_012965.1 UDP-glucose:dolichyl-phosphate glucosyltransferase 1054773 8199918 PAS_chr3_0552 Pichia pastoris GS115 UDP-glucose:dolichyl-phosphate glucosyltransferase XP_002492780.1 1053781 R 644223 CDS PAS_chr3_1199 254571343 8199919 complement(1054973..1055521) 1 NC_012965.1 hypothetical protein 1055521 8199919 PAS_chr3_1199 Pichia pastoris GS115 hypothetical protein XP_002492781.1 1054973 R 644223 CDS PAS_chr3_0553 254571345 8199637 1055726..1056490 1 NC_012965.1 hypothetical protein 1056490 8199637 PAS_chr3_0553 Pichia pastoris GS115 hypothetical protein XP_002492782.1 1055726 D 644223 CDS PAS_chr3_0554 254571347 8199920 complement(join(1056655..1057103,1057212..1059447)) 1 NC_012965.1 Zinc-finger protein involved in transcriptional control of both nuclear and mitochondrial genes 1059447 8199920 PAS_chr3_0554 Pichia pastoris GS115 Zinc-finger protein involved in transcriptional control of both nuclear and mitochondrial genes XP_002492783.1 1056655 R 644223 CDS PAS_chr3_0557 254571349 8199921 complement(1060927..1062618) 1 NC_012965.1 hypothetical protein 1062618 8199921 PAS_chr3_0557 Pichia pastoris GS115 hypothetical protein XP_002492784.1 1060927 R 644223 CDS PAS_chr3_0558 254571351 8199922 complement(1062822..1063754) 1 NC_012965.1 Putative protein of unknown function 1063754 8199922 PAS_chr3_0558 Pichia pastoris GS115 Putative protein of unknown function XP_002492785.1 1062822 R 644223 CDS PAS_chr3_0559 254571353 8199923 1064241..1065572 1 NC_012965.1 ADP-ribosylation factor GTPase activating protein (ARF GAP) 1065572 8199923 PAS_chr3_0559 Pichia pastoris GS115 ADP-ribosylation factor GTPase activating protein (ARF GAP) XP_002492786.1 1064241 D 644223 CDS PAS_chr3_0560 254571355 8199924 complement(join(1065668..1066197,1066467..1069953)) 1 NC_012965.1 Protein involved in positive regulation of both 1,3-beta-glucan synthesis and the Pkc1p-MAPK pathway 1069953 8199924 PAS_chr3_0560 Pichia pastoris GS115 Protein involved in positive regulation of both 1,3-beta-glucan synthesis and the Pkc1p-MAPK pathway XP_002492787.1 1065668 R 644223 CDS PAS_chr3_0561 254571357 8199925 1070192..1072057 1 NC_012965.1 Gamma-glutamyltranspeptidase 1072057 8199925 PAS_chr3_0561 Pichia pastoris GS115 Gamma-glutamyltranspeptidase XP_002492788.1 1070192 D 644223 CDS PAS_chr3_0562 254571359 8199926 complement(1072143..1073420) 1 NC_012965.1 Mitochondrial translation elongation factor Tu 1073420 8199926 PAS_chr3_0562 Pichia pastoris GS115 Mitochondrial translation elongation factor Tu XP_002492789.1 1072143 R 644223 CDS PAS_chr3_0563 254571361 8199927 1073587..1074219 1 NC_012965.1 hypothetical protein 1074219 8199927 PAS_chr3_0563 Pichia pastoris GS115 hypothetical protein XP_002492790.1 1073587 D 644223 CDS PAS_chr3_0564 254571363 8199928 1074285..1075424 1 NC_012965.1 Beta subunit of the translation initiation factor eIF2B 1075424 8199928 PAS_chr3_0564 Pichia pastoris GS115 Beta subunit of the translation initiation factor eIF2B XP_002492791.1 1074285 D 644223 CDS PAS_chr3_0565 254571365 8199929 1075751..1076647 1 NC_012965.1 hypothetical protein 1076647 8199929 PAS_chr3_0565 Pichia pastoris GS115 hypothetical protein XP_002492792.1 1075751 D 644223 CDS PAS_chr3_0566 254571367 8199930 complement(1076638..1077810) 1 NC_012965.1 3-phosphoserine aminotransferase 1077810 8199930 PAS_chr3_0566 Pichia pastoris GS115 3-phosphoserine aminotransferase XP_002492793.1 1076638 R 644223 CDS PAS_chr3_0567 254571369 8199931 1078075..1079160 1 NC_012965.1 Peptidyl-prolyl cis-trans isomerase (cyclophilin) 1079160 8199931 PAS_chr3_0567 Pichia pastoris GS115 Peptidyl-prolyl cis-trans isomerase (cyclophilin) XP_002492794.1 1078075 D 644223 CDS PAS_chr3_0568 254571371 8199932 1079704..1084935 1 NC_012965.1 RNA polymerase II largest subunit B220 1084935 8199932 PAS_chr3_0568 Pichia pastoris GS115 RNA polymerase II largest subunit B220 XP_002492795.1 1079704 D 644223 CDS PAS_chr3_0569 254571373 8199933 complement(1085043..1087070) 1 NC_012965.1 Biotin:apoprotein ligase, covalently modifies proteins with the addition of biotin 1087070 8199933 PAS_chr3_0569 Pichia pastoris GS115 Biotin:apoprotein ligase, covalently modifies proteins with the addition of biotin XP_002492796.1 1085043 R 644223 CDS PAS_chr3_0570 254571375 8199934 1087231..1088157 1 NC_012965.1 Cardiolipin synthase 1088157 8199934 PAS_chr3_0570 Pichia pastoris GS115 Cardiolipin synthase XP_002492797.1 1087231 D 644223 CDS PAS_chr3_0571 254571377 8199935 complement(1088183..1089766) 1 NC_012965.1 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p 1089766 8199935 PAS_chr3_0571 Pichia pastoris GS115 Subunit of the cytosolic chaperonin Cct ring complex, related to Tcp1p XP_002492798.1 1088183 R 644223 CDS PAS_chr3_0572 254571379 8199777 1090117..1091079 1 NC_012965.1 Protein involved in nutritional control of the cell cycle 1091079 8199777 PAS_chr3_0572 Pichia pastoris GS115 Protein involved in nutritional control of the cell cycle XP_002492799.1 1090117 D 644223 CDS PAS_chr3_0573 254571381 8199778 complement(1091080..1092813) 1 NC_012965.1 Component of the small (ribosomal) subunit (SSU) processosome required for pre-18S rRNa processing 1092813 8199778 PAS_chr3_0573 Pichia pastoris GS115 Component of the small (ribosomal) subunit (SSU) processosome required for pre-18S rRNa processing XP_002492800.1 1091080 R 644223 CDS PAS_chr3_0574 254571383 8199779 1092941..1094023 1 NC_012965.1 hypothetical protein 1094023 8199779 PAS_chr3_0574 Pichia pastoris GS115 hypothetical protein XP_002492801.1 1092941 D 644223 CDS PAS_chr3_0575 254571385 8199780 complement(1094053..1095063) 1 NC_012965.1 Cyclin associated with protein kinase Kin28p 1095063 8199780 PAS_chr3_0575 Pichia pastoris GS115 Cyclin associated with protein kinase Kin28p XP_002492802.1 1094053 R 644223 CDS PAS_chr3_0576 254571387 8199781 complement(join(1095358..1096780,1097035..1097171,1097427..1097507)) 1 NC_012965.1 Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase 1097507 8199781 PAS_chr3_0576 Pichia pastoris GS115 Alpha subunit of the F1 sector of mitochondrial F1F0 ATP synthase XP_002492803.1 1095358 R 644223 CDS PAS_chr3_0577 254571389 8199782 1097957..1099444 1 NC_012965.1 hypothetical protein 1099444 8199782 PAS_chr3_0577 Pichia pastoris GS115 hypothetical protein XP_002492804.1 1097957 D 644223 CDS PAS_chr3_0578 254571391 8199783 1100167..1101126 1 NC_012965.1 Peroxisomal nudix pyrophosphatase with specificity for coenzyme A and CoA derivatives, may function 1101126 8199783 PAS_chr3_0578 Pichia pastoris GS115 Peroxisomal nudix pyrophosphatase with specificity for coenzyme A and CoA derivatives, may function XP_002492805.1 1100167 D 644223 CDS PAS_chr3_0579 254571393 8199784 complement(1101194..1103197) 1 NC_012965.1 Mitochondrial glycerol-3-phosphate dehydrogenase 1103197 8199784 PAS_chr3_0579 Pichia pastoris GS115 Mitochondrial glycerol-3-phosphate dehydrogenase XP_002492806.1 1101194 R 644223 CDS PAS_chr3_0581 254571395 8199785 complement(1104102..1105148) 1 NC_012965.1 3'-5' exoribonuclease involved in rRNA processing 1105148 8199785 PAS_chr3_0581 Pichia pastoris GS115 3'-5' exoribonuclease involved in rRNA processing XP_002492807.1 1104102 R 644223 CDS PAS_chr3_0582 254571397 8199786 1105282..1105608 1 NC_012965.1 Zinc cluster protein involved in pre-mRNA splicing and cycloheximide resistance 1105608 8199786 PAS_chr3_0582 Pichia pastoris GS115 Zinc cluster protein involved in pre-mRNA splicing and cycloheximide resistance XP_002492808.1 1105282 D 644223 CDS PAS_chr3_0583 254571399 8199787 1105831..1108899 1 NC_012965.1 Protein that contains a Phox homology (PX) domain and binds phosphoinositides 1108899 8199787 PAS_chr3_0583 Pichia pastoris GS115 Protein that contains a Phox homology (PX) domain and binds phosphoinositides XP_002492809.1 1105831 D 644223 CDS PAS_chr3_0584 254571401 8199788 complement(1108982..1109494) 1 NC_012965.1 Component of the TOM (translocase of outer membrane) complex 1109494 8199788 PAS_chr3_0584 Pichia pastoris GS115 Component of the TOM (translocase of outer membrane) complex XP_002492810.1 1108982 R 644223 CDS PAS_chr3_0585 254571403 8199789 complement(1110187..1110801) 1 NC_012965.1 hypothetical protein 1110801 8199789 PAS_chr3_0585 Pichia pastoris GS115 hypothetical protein XP_002492811.1 1110187 R 644223 CDS PAS_chr3_0586 254571405 8199790 1111514..1113430 1 NC_012965.1 Rab escort protein, forms a complex with the Ras-like small GTPase Ypt1p 1113430 8199790 PAS_chr3_0586 Pichia pastoris GS115 Rab escort protein, forms a complex with the Ras-like small GTPase Ypt1p XP_002492812.1 1111514 D 644223 CDS PAS_chr3_1200 254571407 8199791 1113744..1114178 1 NC_012965.1 hypothetical protein 1114178 8199791 PAS_chr3_1200 Pichia pastoris GS115 hypothetical protein XP_002492813.1 1113744 D 644223 CDS PAS_chr3_0587 254571409 8199638 complement(1114235..1115518) 1 NC_012965.1 Checkpoint protein, involved in the activation of the DNA damage and meiotic pachytene checkpoints 1115518 8199638 PAS_chr3_0587 Pichia pastoris GS115 Checkpoint protein, involved in the activation of the DNA damage and meiotic pachytene checkpoints XP_002492814.1 1114235 R 644223 CDS PAS_chr3_0588 254571411 8199792 1115729..1116292 1 NC_012965.1 Peroxisome assembly protein 22 1116292 8199792 PAS_chr3_0588 Pichia pastoris GS115 Peroxisome assembly protein 22 XP_002492815.1 1115729 D 644223 CDS PAS_chr3_0589 254571413 8199793 complement(1116289..1116915) 1 NC_012965.1 Component of yeast cortical actin cytoskeleton 1116915 8199793 PAS_chr3_0589 Pichia pastoris GS115 Component of yeast cortical actin cytoskeleton XP_002492816.1 1116289 R 644223 CDS PAS_chr3_0590 254571415 8199794 1118492..1119226 1 NC_012965.1 Homeodomain-containing transcriptional repressor of PTR2 1119226 8199794 PAS_chr3_0590 Pichia pastoris GS115 Homeodomain-containing transcriptional repressor of PTR2 XP_002492817.1 1118492 D 644223 CDS PAS_chr3_0591 254571417 8199795 complement(1119485..1120615) 1 NC_012965.1 Cytosolic L-asparaginase 1120615 8199795 PAS_chr3_0591 Pichia pastoris GS115 Cytosolic L-asparaginase XP_002492818.1 1119485 R 644223 CDS PAS_chr3_0593 254571419 8199796 complement(1122585..1124303) 1 NC_012965.1 tRNA methyltransferase 1124303 8199796 PAS_chr3_0593 Pichia pastoris GS115 tRNA methyltransferase XP_002492819.1 1122585 R 644223 CDS PAS_chr3_0594 254571421 8199797 1124974..1126833 1 NC_012965.1 F-box protein containing five copies of the WD40 motif, controls cell cycle function 1126833 8199797 PAS_chr3_0594 Pichia pastoris GS115 F-box protein containing five copies of the WD40 motif, controls cell cycle function XP_002492820.1 1124974 D 644223 CDS PAS_chr3_0595 254571423 8199798 complement(1126907..1128118) 1 NC_012965.1 Translation initiation factor eIF4A, identical to Tif1p 1128118 8199798 PAS_chr3_0595 Pichia pastoris GS115 Translation initiation factor eIF4A, identical to Tif1p XP_002492821.1 1126907 R 644223 CDS PAS_chr3_0596 254571425 8199799 complement(join(1128441..1128680,1128816..1128839)) 1 NC_012965.1 Protein component of the small (40S) ribosomal subunit 1128839 8199799 PAS_chr3_0596 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002492822.1 1128441 R 644223 CDS PAS_chr3_0597 254571427 8199800 complement(1129082..1130320) 1 NC_012965.1 Long-chain base-1-phosphate phosphatase with specificity for dihydrosphingosine-1-phosphate 1130320 8199800 PAS_chr3_0597 Pichia pastoris GS115 Long-chain base-1-phosphate phosphatase with specificity for dihydrosphingosine-1-phosphate XP_002492823.1 1129082 R 644223 CDS PAS_chr3_0598 254571429 8199801 1130549..1131373 1 NC_012965.1 Non-essential small GTPase of the Rho/Rac subfamily of Ras-like proteins 1131373 8199801 PAS_chr3_0598 Pichia pastoris GS115 Non-essential small GTPase of the Rho/Rac subfamily of Ras-like proteins XP_002492824.1 1130549 D 644223 CDS PAS_chr3_0599 254571431 8199802 1131621..1133006 1 NC_012965.1 Essential ATP-binding protein required for DNA replication, component of the pre-replicative complex 1133006 8199802 PAS_chr3_0599 Pichia pastoris GS115 Essential ATP-binding protein required for DNA replication, component of the pre-replicative complex XP_002492825.1 1131621 D 644223 CDS PAS_chr3_0600 254571433 8199803 1133305..1135896 1 NC_012965.1 Subunit of the Set3C deacetylase complex that interacts directly with the Set3C subunit 1135896 8199803 PAS_chr3_0600 Pichia pastoris GS115 Subunit of the Set3C deacetylase complex that interacts directly with the Set3C subunit XP_002492826.1 1133305 D 644223 CDS PAS_chr3_0601 254571435 8199804 complement(1135874..1136887) 1 NC_012965.1 hypothetical protein 1136887 8199804 PAS_chr3_0601 Pichia pastoris GS115 hypothetical protein XP_002492827.1 1135874 R 644223 CDS PAS_chr3_0602 254571437 8199805 1137217..1138221 1 NC_012965.1 Fatty acid elongase 1138221 8199805 PAS_chr3_0602 Pichia pastoris GS115 Fatty acid elongase XP_002492828.1 1137217 D 644223 CDS PAS_chr3_0603 254571439 8199806 complement(1138349..1139455) 1 NC_012965.1 Protein involved in rRNA processing 1139455 8199806 PAS_chr3_0603 Pichia pastoris GS115 Protein involved in rRNA processing XP_002492829.1 1138349 R 644223 CDS PAS_chr3_0604 254571441 8199807 1139601..1140626 1 NC_012965.1 Putative ribokinase 1140626 8199807 PAS_chr3_0604 Pichia pastoris GS115 Putative ribokinase XP_002492830.1 1139601 D 644223 CDS PAS_chr3_0605 254571443 8199808 complement(join(1140738..1140745,1140796..1144228)) 1 NC_012965.1 Ubiquitin carboxyl-terminal hydrolase 1144228 8199808 PAS_chr3_0605 Pichia pastoris GS115 Ubiquitin carboxyl-terminal hydrolase XP_002492831.1 1140738 R 644223 CDS PAS_chr3_0606 254571445 8199809 join(1144483..1146445,1146594..1150981) 1 NC_012965.1 PProtein homologous to human Chediak-Higashi syndrome and murine Beige proteins 1150981 8199809 PAS_chr3_0606 Pichia pastoris GS115 PProtein homologous to human Chediak-Higashi syndrome and murine Beige proteins XP_002492832.1 1144483 D 644223 CDS PAS_chr3_0607 254571447 8199810 complement(1150989..1151633) 1 NC_012965.1 hypothetical protein 1151633 8199810 PAS_chr3_0607 Pichia pastoris GS115 hypothetical protein XP_002492833.1 1150989 R 644223 CDS PAS_chr3_0608 254571449 8199811 complement(1152181..1153686) 1 NC_012965.1 Protein serine/threonine phosphatase with similarity to human phosphatase PP5 1153686 8199811 PAS_chr3_0608 Pichia pastoris GS115 Protein serine/threonine phosphatase with similarity to human phosphatase PP5 XP_002492834.1 1152181 R 644223 CDS PAS_chr3_0609 254571451 8199812 1153945..1155216 1 NC_012965.1 Beta (RNA 5'-triphosphatase) subunit of the mRNA capping enzyme 1155216 8199812 PAS_chr3_0609 Pichia pastoris GS115 Beta (RNA 5'-triphosphatase) subunit of the mRNA capping enzyme XP_002492835.1 1153945 D 644223 CDS PAS_chr3_0610 254571453 8199813 1155301..1155987 1 NC_012965.1 hypothetical protein 1155987 8199813 PAS_chr3_0610 Pichia pastoris GS115 hypothetical protein XP_002492836.1 1155301 D 644223 CDS PAS_chr3_0612 254571455 8199814 complement(1157985..1159631) 1 NC_012965.1 Karyopherin alpha homolog, forms a dimer with karyopherin beta Kap95p 1159631 8199814 PAS_chr3_0612 Pichia pastoris GS115 Karyopherin alpha homolog, forms a dimer with karyopherin beta Kap95p XP_002492837.1 1157985 R 644223 CDS PAS_chr3_0613 254571457 8199815 1160086..1160826 1 NC_012965.1 Putative protein of unknown function with similarity to phosphoserine phosphatases 1160826 8199815 PAS_chr3_0613 Pichia pastoris GS115 Putative protein of unknown function with similarity to phosphoserine phosphatases XP_002492838.1 1160086 D 644223 CDS PAS_chr3_1201 254571459 8199816 1161008..1162666 1 NC_012965.1 hypothetical protein 1162666 8199816 PAS_chr3_1201 Pichia pastoris GS115 hypothetical protein XP_002492839.1 1161008 D 644223 CDS PAS_chr3_0614 254571461 8199639 1162845..1165727 1 NC_012965.1 Component of the Sec23p-Sec24p heterodimeric complex of the COPII vesicle coat 1165727 8199639 PAS_chr3_0614 Pichia pastoris GS115 Component of the Sec23p-Sec24p heterodimeric complex of the COPII vesicle coat XP_002492840.1 1162845 D 644223 CDS PAS_chr3_0615 254571463 8199817 1166640..1167098 1 NC_012965.1 Subunit Va of cytochrome c oxidase 1167098 8199817 PAS_chr3_0615 Pichia pastoris GS115 Subunit Va of cytochrome c oxidase XP_002492841.1 1166640 D 644223 CDS PAS_chr3_0616 254571465 8199818 1167426..1168502 1 NC_012965.1 Putative S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family 1168502 8199818 PAS_chr3_0616 Pichia pastoris GS115 Putative S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family XP_002492842.1 1167426 D 644223 CDS PAS_chr3_1202 254571467 8199819 1168625..1169752 1 NC_012965.1 hypothetical protein 1169752 8199819 PAS_chr3_1202 Pichia pastoris GS115 hypothetical protein XP_002492843.1 1168625 D 644223 CDS PAS_chr3_0618 254571469 8199640 complement(1173431..1174261) 1 NC_012965.1 Dual-specificity protein phosphatase 1174261 8199640 PAS_chr3_0618 Pichia pastoris GS115 Dual-specificity protein phosphatase XP_002492844.1 1173431 R 644223 CDS PAS_chr3_0619 254571471 8199820 complement(join(1174706..1175176,1175211..1175375)) 1 NC_012965.1 hypothetical protein 1175375 8199820 PAS_chr3_0619 Pichia pastoris GS115 hypothetical protein XP_002492845.1 1174706 R 644223 CDS PAS_chr3_0620 254571473 8199821 join(1175663..1176423,1176486..1176855) 1 NC_012965.1 Alpha-1,6-mannosyltransferase involved in cell wall mannan biosynthesis 1176855 8199821 PAS_chr3_0620 Pichia pastoris GS115 Alpha-1,6-mannosyltransferase involved in cell wall mannan biosynthesis XP_002492846.1 1175663 D 644223 CDS PAS_chr3_0622 254571475 8199822 complement(join(1179154..1180763,1180883..1181711)) 1 NC_012965.1 tRNA ligase, required for tRNA splicing 1181711 8199822 PAS_chr3_0622 Pichia pastoris GS115 tRNA ligase, required for tRNA splicing XP_002492847.1 1179154 R 644223 CDS PAS_chr3_0623 254571477 8199823 1182241..1183269 1 NC_012965.1 Ornithine carbamoyltransferase (carbamoylphosphate:L-ornithine carbamoyltransferase) 1183269 8199823 PAS_chr3_0623 Pichia pastoris GS115 Ornithine carbamoyltransferase (carbamoylphosphate:L-ornithine carbamoyltransferase) XP_002492848.1 1182241 D 644223 CDS PAS_chr3_0624 254571479 8199824 1183530..1185755 1 NC_012965.1 Protein kinase that regulates the G2/M transition by inhibition of Cdc28p kinase activity 1185755 8199824 PAS_chr3_0624 Pichia pastoris GS115 Protein kinase that regulates the G2/M transition by inhibition of Cdc28p kinase activity XP_002492849.1 1183530 D 644223 CDS PAS_chr3_0625 254571481 8199825 complement(1185885..1187711) 1 NC_012965.1 Transcriptional repressor involved in response to pH and in cell wall construction 1187711 8199825 PAS_chr3_0625 Pichia pastoris GS115 Transcriptional repressor involved in response to pH and in cell wall construction XP_002492850.1 1185885 R 644223 CDS PAS_chr3_0626 254571483 8199826 complement(1187978..1189177) 1 NC_012965.1 ER membrane protein 1189177 8199826 PAS_chr3_0626 Pichia pastoris GS115 ER membrane protein XP_002492851.1 1187978 R 644223 CDS PAS_chr3_0627 254571485 8199827 complement(1190011..1190916) 1 NC_012965.1 Protein that binds to cruciform DNA structures 1190916 8199827 PAS_chr3_0627 Pichia pastoris GS115 Protein that binds to cruciform DNA structures XP_002492852.1 1190011 R 644223 CDS PAS_chr3_1203 254571487 8199828 1191678..1192127 1 NC_012965.1 hypothetical protein 1192127 8199828 PAS_chr3_1203 Pichia pastoris GS115 hypothetical protein XP_002492853.1 1191678 D 644223 CDS PAS_chr3_0628 254571489 8199641 1192218..1192979 1 NC_012965.1 hypothetical protein 1192979 8199641 PAS_chr3_0628 Pichia pastoris GS115 hypothetical protein XP_002492854.1 1192218 D 644223 CDS PAS_chr3_1204 254571491 8199829 complement(1192974..1195736) 1 NC_012965.1 hypothetical protein 1195736 8199829 PAS_chr3_1204 Pichia pastoris GS115 hypothetical protein XP_002492855.1 1192974 R 644223 CDS PAS_chr3_0629 254571493 8199642 complement(1195870..1198305) 1 NC_012965.1 Conserved nuclear protein required to establish sister-chromatid pairing during S-phase 1198305 8199642 PAS_chr3_0629 Pichia pastoris GS115 Conserved nuclear protein required to establish sister-chromatid pairing during S-phase XP_002492856.1 1195870 R 644223 CDS PAS_chr3_0630 254571495 8199830 1198585..1199445 1 NC_012965.1 hypothetical protein 1199445 8199830 PAS_chr3_0630 Pichia pastoris GS115 hypothetical protein XP_002492857.1 1198585 D 644223 CDS PAS_chr3_0631 254571497 8199831 complement(1199405..1200445) 1 NC_012965.1 Mitochondrial 3-hydroxyacyl-thioester dehydratase involved in fatty acid biosynthesis 1200445 8199831 PAS_chr3_0631 Pichia pastoris GS115 Mitochondrial 3-hydroxyacyl-thioester dehydratase involved in fatty acid biosynthesis XP_002492858.1 1199405 R 644223 CDS PAS_chr3_0632 254571499 8199832 1200509..1201945 1 NC_012965.1 tRNA(m(1)G37)methyltransferase 1201945 8199832 PAS_chr3_0632 Pichia pastoris GS115 tRNA(m(1)G37)methyltransferase XP_002492859.1 1200509 D 644223 CDS PAS_chr3_1205 254571501 8199833 complement(1201949..1204363) 1 NC_012965.1 hypothetical protein 1204363 8199833 PAS_chr3_1205 Pichia pastoris GS115 hypothetical protein XP_002492860.1 1201949 R 644223 CDS PAS_chr3_0633 254571503 8199643 complement(1204481..1206085) 1 NC_012965.1 Putative serine type carboxypeptidase with a role in phytochelatin synthesis 1206085 8199643 PAS_chr3_0633 Pichia pastoris GS115 Putative serine type carboxypeptidase with a role in phytochelatin synthesis XP_002492861.1 1204481 R 644223 CDS PAS_chr3_0634 254571505 8199834 1206817..1208058 1 NC_012965.1 Tryptophan synthase involved in tryptophan biosynthesis 1208058 8199834 PAS_chr3_0634 Pichia pastoris GS115 Tryptophan synthase involved in tryptophan biosynthesis XP_002492862.1 1206817 D 644223 CDS PAS_chr3_0635 254571507 8199835 complement(1208055..1210235) 1 NC_012965.1 Calpain-like cysteine protease 1210235 8199835 PAS_chr3_0635 Pichia pastoris GS115 Calpain-like cysteine protease XP_002492863.1 1208055 R 644223 CDS PAS_chr3_0636 254571509 8199836 1210399..1211712 1 NC_012965.1 Beta subunit of the CAAX farnesyltransferase (FTase) 1211712 8199836 PAS_chr3_0636 Pichia pastoris GS115 Beta subunit of the CAAX farnesyltransferase (FTase) XP_002492864.1 1210399 D 644223 CDS PAS_chr3_0637 254571511 8199837 complement(1211716..1212969) 1 NC_012965.1 hypothetical protein 1212969 8199837 PAS_chr3_0637 Pichia pastoris GS115 hypothetical protein XP_002492865.1 1211716 R 644223 CDS PAS_chr3_0638 254571513 8199838 complement(1213159..1213980) 1 NC_012965.1 Subunit of the heme-activated, glucose-repressed Hap2/3/4/5 CCAAT-binding complex 1213980 8199838 PAS_chr3_0638 Pichia pastoris GS115 Subunit of the heme-activated, glucose-repressed Hap2/3/4/5 CCAAT-binding complex XP_002492866.1 1213159 R 644223 CDS PAS_chr3_0639 254571515 8199839 join(1214277..1214447,1214498..1214791) 1 NC_012965.1 Sorting nexin 1214791 8199839 PAS_chr3_0639 Pichia pastoris GS115 Sorting nexin XP_002492867.1 1214277 D 644223 CDS PAS_chr3_0640 254571517 8199840 1214987..1215787 1 NC_012965.1 Carboxypeptidase Y inhibitor, function requires acetylation by the NatB N-terminal acetyltransferase 1215787 8199840 PAS_chr3_0640 Pichia pastoris GS115 Carboxypeptidase Y inhibitor, function requires acetylation by the NatB N-terminal acetyltransferase XP_002492868.1 1214987 D 644223 CDS PAS_chr3_0641 254571519 8199841 1215967..1218171 1 NC_012965.1 Subunit of holo-CPF, a multiprotein complex and functional homolog of mammalian CPSF 1218171 8199841 PAS_chr3_0641 Pichia pastoris GS115 Subunit of holo-CPF, a multiprotein complex and functional homolog of mammalian CPSF XP_002492869.1 1215967 D 644223 CDS PAS_chr3_0642 254571521 8199842 complement(1218207..1219736) 1 NC_012965.1 Subunit of the SF3a splicing factor complex, required for spliceosome assembly 1219736 8199842 PAS_chr3_0642 Pichia pastoris GS115 Subunit of the SF3a splicing factor complex, required for spliceosome assembly XP_002492870.1 1218207 R 644223 CDS PAS_chr3_0643 254571523 8199843 complement(1219848..1223330) 1 NC_012965.1 Putative ion transporter, similar to mammalian electroneutral Na(+)-(K+)-C1-cotransporter family 1223330 8199843 PAS_chr3_0643 Pichia pastoris GS115 Putative ion transporter, similar to mammalian electroneutral Na(+)-(K+)-C1-cotransporter family XP_002492871.1 1219848 R 644223 CDS PAS_chr3_0644 254571525 8199844 1223588..1225942 1 NC_012965.1 RNA helicase in the DEAD-box family, necessary for prespliceosome formation 1225942 8199844 PAS_chr3_0644 Pichia pastoris GS115 RNA helicase in the DEAD-box family, necessary for prespliceosome formation XP_002492872.1 1223588 D 644223 CDS PAS_chr3_0646 254571527 8199845 complement(1228904..1234018) 1 NC_012965.1 Phospholipase D, catalyzes the hydrolysis of phosphatidylcholine 1234018 8199845 PAS_chr3_0646 Pichia pastoris GS115 Phospholipase D, catalyzes the hydrolysis of phosphatidylcholine XP_002492873.1 1228904 R 644223 CDS PAS_chr3_0647 254571529 8199846 1234861..1236327 1 NC_012965.1 Fumarase, converts fumaric acid to L-malic acid in the TCA cycle 1236327 8199846 PAS_chr3_0647 Pichia pastoris GS115 Fumarase, converts fumaric acid to L-malic acid in the TCA cycle XP_002492874.1 1234861 D 644223 CDS PAS_chr3_0648 254571531 8199847 complement(1236581..1237618) 1 NC_012965.1 Thiazole synthase, catalyzes formation of the thiazole moiety of thiamin pyrophosphate 1237618 8199847 PAS_chr3_0648 Pichia pastoris GS115 Thiazole synthase, catalyzes formation of the thiazole moiety of thiamin pyrophosphate XP_002492875.1 1236581 R 644223 CDS PAS_chr3_0649 254571533 8199848 complement(join(1238135..1238376,1238457..1239813)) 1 NC_012965.1 Transporter of thiamine or related compound 1239813 8199848 PAS_chr3_0649 Pichia pastoris GS115 Transporter of thiamine or related compound XP_002492876.1 1238135 R 644223 CDS PAS_chr3_0651 254571535 8199849 1241693..1242934 1 NC_012965.1 RNA polymerase I subunit A49 1242934 8199849 PAS_chr3_0651 Pichia pastoris GS115 RNA polymerase I subunit A49 XP_002492877.1 1241693 D 644223 CDS PAS_chr3_0652 254571537 8199850 join(1243070..1243080,1243132..1243885) 1 NC_012965.1 NAP family histone chaperone 1243885 8199850 PAS_chr3_0652 Pichia pastoris GS115 NAP family histone chaperone XP_002492878.1 1243070 D 644223 CDS PAS_chr3_0653 254571539 8199851 complement(1243948..1248456) 1 NC_012965.1 Type I transmembrane sorting receptor for multiple vacuolar hydrolases 1248456 8199851 PAS_chr3_0653 Pichia pastoris GS115 Type I transmembrane sorting receptor for multiple vacuolar hydrolases XP_002492879.1 1243948 R 644223 CDS PAS_chr3_0654 254571541 8199852 complement(1248689..1250932) 1 NC_012965.1 Subunit of a complex with Ctf8p that shares some subunits with Replication Factor C 1250932 8199852 PAS_chr3_0654 Pichia pastoris GS115 Subunit of a complex with Ctf8p that shares some subunits with Replication Factor C XP_002492880.1 1248689 R 644223 CDS PAS_chr3_0655 254571543 8199853 join(1251207..1251311,1251425..1251592,1251655..1252395) 1 NC_012965.1 Phosphatidylinositol/phosphatidylcholine transfer protein 1252395 8199853 PAS_chr3_0655 Pichia pastoris GS115 Phosphatidylinositol/phosphatidylcholine transfer protein XP_002492881.1 1251207 D 644223 CDS PAS_chr3_0656 254571545 8199995 1252692..1255715 1 NC_012965.1 GTPase activating factor for Rsr1p/Bud1p required for both axial and bipolar budding patterns 1255715 8199995 PAS_chr3_0656 Pichia pastoris GS115 GTPase activating factor for Rsr1p/Bud1p required for both axial and bipolar budding patterns XP_002492882.1 1252692 D 644223 CDS PAS_chr3_0657 254571547 8200358 complement(join(1255743..1257928,1258008..1258647)) 1 NC_012965.1 ATP-dependent RNA helicase of the SFI superfamily, required for nonsense mediated mRNA decay and for 1258647 8200358 PAS_chr3_0657 Pichia pastoris GS115 ATP-dependent RNA helicase of the SFI superfamily, required for nonsense mediated mRNA decay and for XP_002492883.1 1255743 R 644223 CDS PAS_chr3_1206 254571549 8200359 complement(1258937..1260145) 1 NC_012965.1 hypothetical protein 1260145 8200359 PAS_chr3_1206 Pichia pastoris GS115 hypothetical protein XP_002492884.1 1258937 R 644223 CDS PAS_chr3_0659 254571551 8199644 1261470..1263851 1 NC_012965.1 Putative mitochondrial aconitase isozyme 1263851 8199644 PAS_chr3_0659 Pichia pastoris GS115 Putative mitochondrial aconitase isozyme XP_002492885.1 1261470 D 644223 CDS PAS_chr3_0660 254571553 8200360 complement(join(1263917..1268616,1268728..1268797)) 1 NC_012965.1 GTP/GDP exchange factor for Rsr1p (Bud1p) required for both axial and bipolar budding patterns 1268797 8200360 PAS_chr3_0660 Pichia pastoris GS115 GTP/GDP exchange factor for Rsr1p (Bud1p) required for both axial and bipolar budding patterns XP_002492886.1 1263917 R 644223 CDS PAS_chr3_0661 254571555 8200361 complement(1268948..1270240) 1 NC_012965.1 Putative protein of unknown function 1270240 8200361 PAS_chr3_0661 Pichia pastoris GS115 Putative protein of unknown function XP_002492887.1 1268948 R 644223 CDS PAS_chr3_0662 254571557 8200362 complement(1270447..1272348) 1 NC_012965.1 Ferrioxamine B transporter 1272348 8200362 PAS_chr3_0662 Pichia pastoris GS115 Ferrioxamine B transporter XP_002492888.1 1270447 R 644223 CDS PAS_chr3_0663 254571559 8200363 join(1273311..1273318,1273379..1274006) 1 NC_012965.1 hypothetical protein 1274006 8200363 PAS_chr3_0663 Pichia pastoris GS115 hypothetical protein XP_002492889.1 1273311 D 644223 CDS PAS_chr3_0664 254571561 8200364 complement(1274070..1274528) 1 NC_012965.1 Mitochondrial translational activator of the COB mRNA 1274528 8200364 PAS_chr3_0664 Pichia pastoris GS115 Mitochondrial translational activator of the COB mRNA XP_002492890.1 1274070 R 644223 CDS PAS_chr3_0665 254571563 8200365 join(1274725..1274762,1274811..1275213) 1 NC_012965.1 17-kDa component of the U4/U6aU5 tri-snRNP, plays an essential role in pre-mRNA splicing 1275213 8200365 PAS_chr3_0665 Pichia pastoris GS115 17-kDa component of the U4/U6aU5 tri-snRNP, plays an essential role in pre-mRNA splicing XP_002492891.1 1274725 D 644223 CDS PAS_chr3_0666 254571565 8200366 1275360..1276358 1 NC_012965.1 hypothetical protein 1276358 8200366 PAS_chr3_0666 Pichia pastoris GS115 hypothetical protein XP_002492892.1 1275360 D 644223 CDS PAS_chr3_0667 254571567 8200367 complement(1276395..1276994) 1 NC_012965.1 Adenylylsulfate kinase, required for sulfate assimilation and involved in methionine metabolism 1276994 8200367 PAS_chr3_0667 Pichia pastoris GS115 Adenylylsulfate kinase, required for sulfate assimilation and involved in methionine metabolism XP_002492893.1 1276395 R 644223 CDS PAS_chr3_1207 254571569 8200368 complement(1277203..1278759) 1 NC_012965.1 hypothetical protein 1278759 8200368 PAS_chr3_1207 Pichia pastoris GS115 hypothetical protein XP_002492894.1 1277203 R 644223 CDS PAS_chr3_0668 254571571 8199645 complement(1278879..1281932) 1 NC_012965.1 Putative protein of unknown function 1281932 8199645 PAS_chr3_0668 Pichia pastoris GS115 Putative protein of unknown function XP_002492895.1 1278879 R 644223 CDS PAS_chr3_0669 254571573 8200369 1282474..1285383 1 NC_012965.1 hypothetical protein 1285383 8200369 PAS_chr3_0669 Pichia pastoris GS115 hypothetical protein XP_002492896.1 1282474 D 644223 CDS PAS_chr3_0670 254571575 8200370 complement(1285564..1285905) 1 NC_012965.1 Cytoplasmic thioredoxin isoenzyme of the thioredoxin system 1285905 8200370 PAS_chr3_0670 Pichia pastoris GS115 Cytoplasmic thioredoxin isoenzyme of the thioredoxin system XP_002492897.1 1285564 R 644223 CDS PAS_chr3_0671 254571577 8200371 1287126..1288313 1 NC_012965.1 hypothetical protein 1288313 8200371 PAS_chr3_0671 Pichia pastoris GS115 hypothetical protein XP_002492898.1 1287126 D 644223 CDS PAS_chr3_0672 254571579 8200372 1288462..1290951 1 NC_012965.1 Predominantly nucleolar DEAH-box ATP-dependent RNA helicase, required for 18S rRNA synthesis 1290951 8200372 PAS_chr3_0672 Pichia pastoris GS115 Predominantly nucleolar DEAH-box ATP-dependent RNA helicase, required for 18S rRNA synthesis XP_002492899.1 1288462 D 644223 CDS PAS_chr3_0673 254571581 8200373 1291279..1292235 1 NC_012965.1 Sensor-transducer of the stress-activated PKC1-MPK1 kinase pathway 1292235 8200373 PAS_chr3_0673 Pichia pastoris GS115 Sensor-transducer of the stress-activated PKC1-MPK1 kinase pathway XP_002492900.1 1291279 D 644223 CDS PAS_chr3_0674 254571583 8200374 complement(join(1292271..1293452,1293553..1293969)) 1 NC_012965.1 D-lactate dehydrogenase, located in the mitochondrial matrix 1293969 8200374 PAS_chr3_0674 Pichia pastoris GS115 D-lactate dehydrogenase, located in the mitochondrial matrix XP_002492901.1 1292271 R 644223 CDS PAS_chr3_1208 254571585 8200375 1294092..1295660 1 NC_012965.1 hypothetical protein 1295660 8200375 PAS_chr3_1208 Pichia pastoris GS115 hypothetical protein XP_002492902.1 1294092 D 644223 CDS PAS_chr3_0675 254571587 8199646 1296088..1297818 1 NC_012965.1 Asparagine synthetase, isozyme of Asn1p 1297818 8199646 PAS_chr3_0675 Pichia pastoris GS115 Asparagine synthetase, isozyme of Asn1p XP_002492903.1 1296088 D 644223 CDS PAS_chr3_0676 254571589 8200376 join(1298042..1298393,1298591..1299474) 1 NC_012965.1 UDP-N-acetylglucosamine pyrophosphorylase 1299474 8200376 PAS_chr3_0676 Pichia pastoris GS115 UDP-N-acetylglucosamine pyrophosphorylase XP_002492904.1 1298042 D 644223 CDS PAS_chr3_0677 254571591 8200377 complement(1299483..1300349) 1 NC_012965.1 hypothetical protein 1300349 8200377 PAS_chr3_0677 Pichia pastoris GS115 hypothetical protein XP_002492905.1 1299483 R 644223 CDS PAS_chr3_0678 254571593 8200378 1300611..1301486 1 NC_012965.1 Protein that interacts with the karyopherin Srp1p 1301486 8200378 PAS_chr3_0678 Pichia pastoris GS115 Protein that interacts with the karyopherin Srp1p XP_002492906.1 1300611 D 644223 CDS PAS_chr3_0679 254571595 8200379 1301705..1302055 1 NC_012965.1 hypothetical protein 1302055 8200379 PAS_chr3_0679 Pichia pastoris GS115 hypothetical protein XP_002492907.1 1301705 D 644223 CDS PAS_chr3_0680 254571597 8200380 complement(1302114..1303439) 1 NC_012965.1 hypothetical protein 1303439 8200380 PAS_chr3_0680 Pichia pastoris GS115 hypothetical protein XP_002492908.1 1302114 R 644223 CDS PAS_chr3_0681 254571599 8200381 1303562..1304203 1 NC_012965.1 RNA exonuclease, required for U4 snRNA maturation 1304203 8200381 PAS_chr3_0681 Pichia pastoris GS115 RNA exonuclease, required for U4 snRNA maturation XP_002492909.1 1303562 D 644223 CDS PAS_chr3_0682 254571601 8200382 complement(1304166..1305188) 1 NC_012965.1 Cytoplasmic protein required for replication of Brome mosaic virus in S. cerevisiae 1305188 8200382 PAS_chr3_0682 Pichia pastoris GS115 Cytoplasmic protein required for replication of Brome mosaic virus in S. cerevisiae XP_002492910.1 1304166 R 644223 CDS PAS_chr3_0683 254571603 8200383 complement(1305364..1306239) 1 NC_012965.1 Essential nucleolar protein that is a component of the SSU (small subunit) processome 1306239 8200383 PAS_chr3_0683 Pichia pastoris GS115 Essential nucleolar protein that is a component of the SSU (small subunit) processome XP_002492911.1 1305364 R 644223 CDS PAS_chr3_0684 254571605 8200384 1306388..1308385 1 NC_012965.1 Protein that forms a nuclear complex with Noc2p that binds to 66S ribosomal precursors 1308385 8200384 PAS_chr3_0684 Pichia pastoris GS115 Protein that forms a nuclear complex with Noc2p that binds to 66S ribosomal precursors XP_002492912.1 1306388 D 644223 CDS PAS_chr3_0685 254571607 8200385 complement(1308432..1309064) 1 NC_012965.1 Protein with similarity to Emp24p and Erv25p, member of the p24 family 1309064 8200385 PAS_chr3_0685 Pichia pastoris GS115 Protein with similarity to Emp24p and Erv25p, member of the p24 family XP_002492913.1 1308432 R 644223 CDS PAS_chr3_0686 254571609 8200386 complement(1309177..1309620) 1 NC_012965.1 Molybdenum cofactor biosynthesis protein 1309620 8200386 PAS_chr3_0686 Pichia pastoris GS115 Molybdenum cofactor biosynthesis protein XP_002492914.1 1309177 R 644223 CDS PAS_chr3_0687 254571611 8200387 complement(1309748..1310839) 1 NC_012965.1 hypothetical protein 1310839 8200387 PAS_chr3_0687 Pichia pastoris GS115 hypothetical protein XP_002492915.1 1309748 R 644223 CDS PAS_chr3_0688 254571613 8200388 1311237..1312187 1 NC_012965.1 E2-like enzyme involved in autophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway 1312187 8200388 PAS_chr3_0688 Pichia pastoris GS115 E2-like enzyme involved in autophagy and the cytoplasm-to-vacuole targeting (Cvt) pathway XP_002492916.1 1311237 D 644223 CDS PAS_chr3_0689 254571615 8200389 1312982..1314370 1 NC_012965.1 Transcription factor that stimulates expression of proteasome genes 1314370 8200389 PAS_chr3_0689 Pichia pastoris GS115 Transcription factor that stimulates expression of proteasome genes XP_002492917.1 1312982 D 644223 CDS PAS_chr3_0690 254571617 8200390 join(1314532..1314556,1314642..1315498) 1 NC_012965.1 Epsilon-COP subunit of the coatomer 1315498 8200390 PAS_chr3_0690 Pichia pastoris GS115 Epsilon-COP subunit of the coatomer XP_002492918.1 1314532 D 644223 CDS PAS_chr3_0691 254571619 8200391 complement(1316319..1317008) 1 NC_012965.1 Possible chaperone and cysteine protease with similarity to E. coli Hsp31 1317008 8200391 PAS_chr3_0691 Pichia pastoris GS115 Possible chaperone and cysteine protease with similarity to E. coli Hsp31 XP_002492919.1 1316319 R 644223 CDS PAS_chr3_0692 254571621 8200392 complement(1317005..1317946) 1 NC_012965.1 hypothetical protein 1317946 8200392 PAS_chr3_0692 Pichia pastoris GS115 hypothetical protein XP_002492920.1 1317005 R 644223 CDS PAS_chr3_0693 254571623 8200393 1318176..1318928 1 NC_012965.1 Tetrameric phosphoglycerate mutase 1318928 8200393 PAS_chr3_0693 Pichia pastoris GS115 Tetrameric phosphoglycerate mutase XP_002492921.1 1318176 D 644223 CDS PAS_chr3_1209 254571625 8200394 1319299..1321569 1 NC_012965.1 hypothetical protein 1321569 8200394 PAS_chr3_1209 Pichia pastoris GS115 hypothetical protein XP_002492922.1 1319299 D 644223 CDS PAS_chr3_0694 254571627 8199647 join(1321824..1323836,1323908..1326397) 1 NC_012965.1 Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p 1326397 8199647 PAS_chr3_0694 Pichia pastoris GS115 Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p XP_002492923.1 1321824 D 644223 CDS PAS_chr3_0696 254571629 8200395 1326828..1328138 1 NC_012965.1 hypothetical protein 1328138 8200395 PAS_chr3_0696 Pichia pastoris GS115 hypothetical protein XP_002492924.1 1326828 D 644223 CDS PAS_chr3_0697 254571631 8200396 complement(1328171..1328875) 1 NC_012965.1 hypothetical protein 1328875 8200396 PAS_chr3_0697 Pichia pastoris GS115 hypothetical protein XP_002492925.1 1328171 R 644223 CDS PAS_chr3_0698 254571633 8200397 complement(1329393..1331282) 1 NC_012965.1 Evolutionarily-conserved tail-anchored outer mitochondrial membrane GTPase 1331282 8200397 PAS_chr3_0698 Pichia pastoris GS115 Evolutionarily-conserved tail-anchored outer mitochondrial membrane GTPase XP_002492926.1 1329393 R 644223 CDS PAS_chr3_0699 254571635 8200398 join(1331460..1331462,1331577..1332347) 1 NC_012965.1 Alpha 7 subunit of the 20S proteasome 1332347 8200398 PAS_chr3_0699 Pichia pastoris GS115 Alpha 7 subunit of the 20S proteasome XP_002492927.1 1331460 D 644223 CDS PAS_chr3_0700 254571637 8200399 complement(1332393..1334009) 1 NC_012965.1 hypothetical protein 1334009 8200399 PAS_chr3_0700 Pichia pastoris GS115 hypothetical protein XP_002492928.1 1332393 R 644223 CDS PAS_chr3_0701 254571639 8200400 1334353..1336500 1 NC_012965.1 Subunit of the core complex of translation initiation factor 3(eIF3), essential for translation 1336500 8200400 PAS_chr3_0701 Pichia pastoris GS115 Subunit of the core complex of translation initiation factor 3(eIF3), essential for translation XP_002492929.1 1334353 D 644223 CDS PAS_chr3_0702 254571641 8200401 complement(1336594..1336953) 1 NC_012965.1 Putative protein of unknown function 1336953 8200401 PAS_chr3_0702 Pichia pastoris GS115 Putative protein of unknown function XP_002492930.1 1336594 R 644223 CDS PAS_chr3_1210 254571643 8200402 complement(1337056..1338663) 1 NC_012965.1 hypothetical protein 1338663 8200402 PAS_chr3_1210 Pichia pastoris GS115 hypothetical protein XP_002492931.1 1337056 R 644223 CDS PAS_chr3_1211 254571645 8199648 1338873..1339625 1 NC_012965.1 hypothetical protein 1339625 8199648 PAS_chr3_1211 Pichia pastoris GS115 hypothetical protein XP_002492932.1 1338873 D 644223 CDS PAS_chr3_0703 254571647 8199649 complement(1339659..1342697) 1 NC_012965.1 DNA polymerase gamma 1342697 8199649 PAS_chr3_0703 Pichia pastoris GS115 DNA polymerase gamma XP_002492933.1 1339659 R 644223 CDS PAS_chr3_0704 254571649 8200403 join(1343065..1343097,1343160..1343819) 1 NC_012965.1 Subunit E of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) 1343819 8200403 PAS_chr3_0704 Pichia pastoris GS115 Subunit E of the eight-subunit V1 peripheral membrane domain of the vacuolar H+-ATPase (V-ATPase) XP_002492934.1 1343065 D 644223 CDS PAS_chr3_0705 254571651 8200404 complement(1343894..1346470) 1 NC_012965.1 hypothetical protein 1346470 8200404 PAS_chr3_0705 Pichia pastoris GS115 hypothetical protein XP_002492935.1 1343894 R 644223 CDS PAS_chr3_0706 254571653 8200405 complement(1346696..1348015) 1 NC_012965.1 Mitochondrial inner membrane Mg(2+) channel 1348015 8200405 PAS_chr3_0706 Pichia pastoris GS115 Mitochondrial inner membrane Mg(2+) channel XP_002492936.1 1346696 R 644223 CDS PAS_chr3_0707 254571655 8200406 1348314..1349249 1 NC_012965.1 RNA polymerase I subunit A43 1349249 8200406 PAS_chr3_0707 Pichia pastoris GS115 RNA polymerase I subunit A43 XP_002492937.1 1348314 D 644223 CDS PAS_chr3_0708 254571657 8200407 1349367..1350191 1 NC_012965.1 Essential component of the MIND kinetochore complex (Mtw1p Including Nnf1p-Nsl1p-Dsn1p) 1350191 8200407 PAS_chr3_0708 Pichia pastoris GS115 Essential component of the MIND kinetochore complex (Mtw1p Including Nnf1p-Nsl1p-Dsn1p) XP_002492938.1 1349367 D 644223 CDS PAS_chr3_0709 254571659 8200408 complement(1351054..1351668) 1 NC_012965.1 Ubiquitin-conjugating enzyme most similar in sequence to Xenopus ubiquitin-conjugating enzyme E2-C 1351668 8200408 PAS_chr3_0709 Pichia pastoris GS115 Ubiquitin-conjugating enzyme most similar in sequence to Xenopus ubiquitin-conjugating enzyme E2-C XP_002492939.1 1351054 R 644223 CDS PAS_chr3_0710 254571661 8200409 complement(1352248..1352691) 1 NC_012965.1 Ubiquitin-conjugating enzyme that mediates selective degradation of short-lived and abnormal protein 1352691 8200409 PAS_chr3_0710 Pichia pastoris GS115 Ubiquitin-conjugating enzyme that mediates selective degradation of short-lived and abnormal protein XP_002492940.1 1352248 R 644223 CDS PAS_chr3_0712 254571663 8200410 1356830..1359724 1 NC_012965.1 Basic helix-loop-helix (bHLH) protein with similarity to myc-family transcription factors 1359724 8200410 PAS_chr3_0712 Pichia pastoris GS115 Basic helix-loop-helix (bHLH) protein with similarity to myc-family transcription factors XP_002492941.1 1356830 D 644223 CDS PAS_chr3_0713 254571665 8200411 1360013..1363588 1 NC_012965.1 Subunit of the SAGA transcriptional regulatory complex, involved in proper assembly of the complex 1363588 8200411 PAS_chr3_0713 Pichia pastoris GS115 Subunit of the SAGA transcriptional regulatory complex, involved in proper assembly of the complex XP_002492942.1 1360013 D 644223 CDS PAS_chr3_0714 254571667 8200412 complement(1363634..1365100) 1 NC_012965.1 Putative divalent metal ion transporter involved in iron homeostasis 1365100 8200412 PAS_chr3_0714 Pichia pastoris GS115 Putative divalent metal ion transporter involved in iron homeostasis XP_002492943.1 1363634 R 644223 CDS PAS_chr3_0715 254571669 8200413 1365420..1369298 1 NC_012965.1 Nuclear pore membrane glycoprotein 1369298 8200413 PAS_chr3_0715 Pichia pastoris GS115 Nuclear pore membrane glycoprotein XP_002492944.1 1365420 D 644223 CDS PAS_chr3_0716 254571671 8200414 1369442..1370299 1 NC_012965.1 Putative protein of unknown function 1370299 8200414 PAS_chr3_0716 Pichia pastoris GS115 Putative protein of unknown function XP_002492945.1 1369442 D 644223 CDS PAS_chr3_0717 254571673 8200415 1370658..1372283 1 NC_012965.1 hypothetical protein 1372283 8200415 PAS_chr3_0717 Pichia pastoris GS115 hypothetical protein XP_002492946.1 1370658 D 644223 CDS PAS_chr3_0721 254571675 8200416 1375833..1376597 1 NC_012965.1 Putative protein of unknown function that may be involved in intramitochondrial sorting 1376597 8200416 PAS_chr3_0721 Pichia pastoris GS115 Putative protein of unknown function that may be involved in intramitochondrial sorting XP_002492947.1 1375833 D 644223 CDS PAS_chr3_1212 254571677 8200417 1376805..1377407 1 NC_012965.1 hypothetical protein 1377407 8200417 PAS_chr3_1212 Pichia pastoris GS115 hypothetical protein XP_002492948.1 1376805 D 644223 CDS PAS_chr3_0722 254571679 8199650 complement(1377546..1377998) 1 NC_012965.1 Fusion protein that is cleaved to yield a ribosomal protein of the small (40S) subunit and ubiquitin 1377998 8199650 PAS_chr3_0722 Pichia pastoris GS115 Fusion protein that is cleaved to yield a ribosomal protein of the small (40S) subunit and ubiquitin XP_002492949.1 1377546 R 644223 CDS PAS_chr3_1213 254571681 8200418 complement(1378193..1378837) 1 NC_012965.1 hypothetical protein 1378837 8200418 PAS_chr3_1213 Pichia pastoris GS115 hypothetical protein XP_002492950.1 1378193 R 644223 CDS PAS_chr3_0723 254571683 8199651 1379105..1380448 1 NC_012965.1 hypothetical protein 1380448 8199651 PAS_chr3_0723 Pichia pastoris GS115 hypothetical protein XP_002492951.1 1379105 D 644223 CDS PAS_chr3_0724 254571685 8200419 complement(1380423..1381172) 1 NC_012965.1 hypothetical protein 1381172 8200419 PAS_chr3_0724 Pichia pastoris GS115 hypothetical protein XP_002492952.1 1380423 R 644223 CDS PAS_chr3_0725 254571687 8200420 1381503..1382414 1 NC_012965.1 Protein with a role in ubiquinone (Coenzyme Q) biosynthesis 1382414 8200420 PAS_chr3_0725 Pichia pastoris GS115 Protein with a role in ubiquinone (Coenzyme Q) biosynthesis XP_002492953.1 1381503 D 644223 CDS PAS_chr3_0726 254571689 8200421 join(1382514..1382616,1382671..1383038) 1 NC_012965.1 Cytidine deaminase 1383038 8200421 PAS_chr3_0726 Pichia pastoris GS115 Cytidine deaminase XP_002492954.1 1382514 D 644223 CDS PAS_chr3_0727 254571691 8200422 complement(1383069..1386068) 1 NC_012965.1 hypothetical protein 1386068 8200422 PAS_chr3_0727 Pichia pastoris GS115 hypothetical protein XP_002492955.1 1383069 R 644223 CDS PAS_chr3_0728 254571693 8200150 1386526..1389987 1 NC_012965.1 ATP binding cassette family member 1389987 8200150 PAS_chr3_0728 Pichia pastoris GS115 ATP binding cassette family member XP_002492956.1 1386526 D 644223 CDS PAS_chr3_0729 254571695 8200424 join(1390450..1390459,1390511..1391376) 1 NC_012965.1 Phosphotyrosine-specific protein phosphatase 1391376 8200424 PAS_chr3_0729 Pichia pastoris GS115 Phosphotyrosine-specific protein phosphatase XP_002492957.1 1390450 D 644223 CDS PAS_chr3_0730 254571697 8200425 1391469..1392317 1 NC_012965.1 hypothetical protein 1392317 8200425 PAS_chr3_0730 Pichia pastoris GS115 hypothetical protein XP_002492958.1 1391469 D 644223 CDS PAS_chr3_0731 254571699 8200426 1392532..1394373 1 NC_012965.1 Cytoplasmic ATPase that is a ribosome-associated molecular chaperone 1394373 8200426 PAS_chr3_0731 Pichia pastoris GS115 Cytoplasmic ATPase that is a ribosome-associated molecular chaperone XP_002492959.1 1392532 D 644223 CDS PAS_chr3_0732 254571701 8200427 complement(1394459..1397257) 1 NC_012965.1 DNA ligase required for nonhomologous end-joining (NHEJ) 1397257 8200427 PAS_chr3_0732 Pichia pastoris GS115 DNA ligase required for nonhomologous end-joining (NHEJ) XP_002492960.1 1394459 R 644223 CDS PAS_chr3_0733 254571703 8200428 1397720..1399405 1 NC_012965.1 Component of serine palmitoyltransferase 1399405 8200428 PAS_chr3_0733 Pichia pastoris GS115 Component of serine palmitoyltransferase XP_002492961.1 1397720 D 644223 CDS PAS_chr3_0734 254571705 8200429 complement(1399463..1401085) 1 NC_012965.1 hypothetical protein 1401085 8200429 PAS_chr3_0734 Pichia pastoris GS115 hypothetical protein XP_002492962.1 1399463 R 644223 CDS PAS_chr3_0735 254571707 8200430 complement(1401348..1402628) 1 NC_012965.1 Inositolphosphotransferase 1, involved in synthesis of mannose-(inositol-P)2-ceramide (M(IP)2C) 1402628 8200430 PAS_chr3_0735 Pichia pastoris GS115 Inositolphosphotransferase 1, involved in synthesis of mannose-(inositol-P)2-ceramide (M(IP)2C) XP_002492963.1 1401348 R 644223 CDS PAS_chr3_1214 254571709 8200431 complement(1402711..1403022) 1 NC_012965.1 hypothetical protein 1403022 8200431 PAS_chr3_1214 Pichia pastoris GS115 hypothetical protein XP_002492964.1 1402711 R 644223 CDS PAS_chr3_0736 254571711 8199652 1403687..1405546 1 NC_012965.1 Putative protein of unknown function 1405546 8199652 PAS_chr3_0736 Pichia pastoris GS115 Putative protein of unknown function XP_002492965.1 1403687 D 644223 CDS PAS_chr3_0737 254571713 8200432 complement(1405577..1406422) 1 NC_012965.1 TFIIE small subunit, involved in RNA polymerase II transcription initiation 1406422 8200432 PAS_chr3_0737 Pichia pastoris GS115 TFIIE small subunit, involved in RNA polymerase II transcription initiation XP_002492966.1 1405577 R 644223 CDS PAS_chr3_0738 254571715 8200433 complement(1406558..1408843) 1 NC_012965.1 Nucleolar DEAD-box protein required for ribosome assembly and function 1408843 8200433 PAS_chr3_0738 Pichia pastoris GS115 Nucleolar DEAD-box protein required for ribosome assembly and function XP_002492967.1 1406558 R 644223 CDS PAS_chr3_0739 254571717 8200434 1408973..1410778 1 NC_012965.1 Protein involved in DNA mismatch repair and crossing-over during meiotic recombination 1410778 8200434 PAS_chr3_0739 Pichia pastoris GS115 Protein involved in DNA mismatch repair and crossing-over during meiotic recombination XP_002492968.1 1408973 D 644223 CDS PAS_chr3_0741 254571719 8200435 1416883..1418274 1 NC_012965.1 Alpha subunit of the oligosaccharyltransferase complex of the ER lumen 1418274 8200435 PAS_chr3_0741 Pichia pastoris GS115 Alpha subunit of the oligosaccharyltransferase complex of the ER lumen XP_002492969.1 1416883 D 644223 CDS PAS_chr3_0742 254571721 8200436 join(1418394..1418426,1418513..1419931) 1 NC_012965.1 Subunit of cleavage factor I (CFI) 1419931 8200436 PAS_chr3_0742 Pichia pastoris GS115 Subunit of cleavage factor I (CFI) XP_002492970.1 1418394 D 644223 CDS PAS_chr3_1215 254571723 8200437 complement(1419974..1420531) 1 NC_012965.1 hypothetical protein 1420531 8200437 PAS_chr3_1215 Pichia pastoris GS115 hypothetical protein XP_002492971.1 1419974 R 644223 CDS PAS_chr3_0743 254571725 8199653 complement(1420700..1421584) 1 NC_012965.1 Nit protein, one of two proteins in S. cerevisiae with similarity to the Nit domain 1421584 8199653 PAS_chr3_0743 Pichia pastoris GS115 Nit protein, one of two proteins in S. cerevisiae with similarity to the Nit domain XP_002492972.1 1420700 R 644223 CDS PAS_chr3_0744 254571727 8200438 complement(1421703..1422662) 1 NC_012965.1 Aldose reductase involved in methylglyoxal, d-xylose and arabinose metabolism 1422662 8200438 PAS_chr3_0744 Pichia pastoris GS115 Aldose reductase involved in methylglyoxal, d-xylose and arabinose metabolism XP_002492973.1 1421703 R 644223 CDS PAS_chr3_0745 254571729 8200439 complement(join(1423035..1423183,1423244..1423277)) 1 NC_012965.1 Cytochrome c oxidase assembly protein/Cu2+ chaperone 1423277 8200439 PAS_chr3_0745 Pichia pastoris GS115 Cytochrome c oxidase assembly protein/Cu2+ chaperone XP_002492974.1 1423035 R 644223 CDS PAS_chr3_0746 254571731 8200440 1423485..1424213 1 NC_012965.1 Putative protein of unknown function 1424213 8200440 PAS_chr3_0746 Pichia pastoris GS115 Putative protein of unknown function XP_002492975.1 1423485 D 644223 CDS PAS_chr3_0747 254571733 8200441 complement(1424301..1425956) 1 NC_012965.1 hypothetical protein 1425956 8200441 PAS_chr3_0747 Pichia pastoris GS115 hypothetical protein XP_002492976.1 1424301 R 644223 CDS PAS_chr3_0748 254571735 8200442 1426152..1426802 1 NC_012965.1 Beta 1 subunit of the 20S proteasome, responsible for cleavage after acidic residues in peptides 1426802 8200442 PAS_chr3_0748 Pichia pastoris GS115 Beta 1 subunit of the 20S proteasome, responsible for cleavage after acidic residues in peptides XP_002492977.1 1426152 D 644223 CDS PAS_chr3_0749 254571737 8200443 1426931..1428157 1 NC_012965.1 Histone acetyltransferase critical for cell survival in the presence of DNA damage during S phase 1428157 8200443 PAS_chr3_0749 Pichia pastoris GS115 Histone acetyltransferase critical for cell survival in the presence of DNA damage during S phase XP_002492978.1 1426931 D 644223 CDS PAS_chr3_0751 254571739 8200444 1429253..1431628 1 NC_012965.1 Dynamin-related GTPase 1431628 8200444 PAS_chr3_0751 Pichia pastoris GS115 Dynamin-related GTPase XP_002492979.1 1429253 D 644223 CDS PAS_chr3_1216 254571741 8200445 1431951..1433345 1 NC_012965.1 hypothetical protein 1433345 8200445 PAS_chr3_1216 Pichia pastoris GS115 hypothetical protein XP_002492980.1 1431951 D 644223 CDS PAS_chr3_0752 254571743 8199654 complement(1433391..1435205) 1 NC_012965.1 Ser/Thr kinase involved in transcription and stress response 1435205 8199654 PAS_chr3_0752 Pichia pastoris GS115 Ser/Thr kinase involved in transcription and stress response XP_002492981.1 1433391 R 644223 CDS PAS_chr3_0753 254571745 8200446 1435489..1436154 1 NC_012965.1 Protein involved in rRNA processing 1436154 8200446 PAS_chr3_0753 Pichia pastoris GS115 Protein involved in rRNA processing XP_002492982.1 1435489 D 644223 CDS PAS_chr3_0754 254571747 8200447 complement(1436215..1439433) 1 NC_012965.1 Mitochondrial and cytoplasmic valyl-tRNA synthetase 1439433 8200447 PAS_chr3_0754 Pichia pastoris GS115 Mitochondrial and cytoplasmic valyl-tRNA synthetase XP_002492983.1 1436215 R 644223 CDS PAS_chr3_0755 254571749 8200448 1439576..1440919 1 NC_012965.1 Splicing factor, component of the U4/U6-U5 snRNP complex 1440919 8200448 PAS_chr3_0755 Pichia pastoris GS115 Splicing factor, component of the U4/U6-U5 snRNP complex XP_002492984.1 1439576 D 644223 CDS PAS_chr3_0756 254571751 8200449 1441459..1442379 1 NC_012965.1 Mitochondrial membrane transporter 1442379 8200449 PAS_chr3_0756 Pichia pastoris GS115 Mitochondrial membrane transporter XP_002492985.1 1441459 D 644223 CDS PAS_chr3_0757 254571753 8200450 complement(1442398..1444086) 1 NC_012965.1 Nucleolar protein, forms a complex with Nop14p 1444086 8200450 PAS_chr3_0757 Pichia pastoris GS115 Nucleolar protein, forms a complex with Nop14p XP_002492986.1 1442398 R 644223 CDS PAS_chr3_0758 254571755 8200451 complement(1444785..1448693) 1 NC_012965.1 Putative GDP/GTP exchange factor required for mitotic exit at low temperatures 1448693 8200451 PAS_chr3_0758 Pichia pastoris GS115 Putative GDP/GTP exchange factor required for mitotic exit at low temperatures XP_002492987.1 1444785 R 644223 CDS PAS_chr3_0759 254571757 8200452 complement(1449052..1451586) 1 NC_012965.1 Zinc-finger transcription factor 1451586 8200452 PAS_chr3_0759 Pichia pastoris GS115 Zinc-finger transcription factor XP_002492988.1 1449052 R 644223 CDS PAS_chr3_0760 254571759 8200453 1451858..1453207 1 NC_012965.1 Putative protein of unknown function 1453207 8200453 PAS_chr3_0760 Pichia pastoris GS115 Putative protein of unknown function XP_002492989.1 1451858 D 644223 CDS PAS_chr3_0761 254571761 8200454 complement(join(1453248..1455495,1455536..1455639)) 1 NC_012965.1 Carnitine acetyltransferase 1455639 8200454 PAS_chr3_0761 Pichia pastoris GS115 Carnitine acetyltransferase XP_002492990.1 1453248 R 644223 CDS PAS_chr3_0762 254571763 8200455 1456141..1456806 1 NC_012965.1 Protein component of the small (40S) ribosomal subunit 1456806 8200455 PAS_chr3_0762 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002492991.1 1456141 D 644223 CDS PAS_chr3_0763 254571765 8200456 1458453..1459292 1 NC_012965.1 Spore-specific water channel that mediates the transport of water across cell membranes 1459292 8200456 PAS_chr3_0763 Pichia pastoris GS115 Spore-specific water channel that mediates the transport of water across cell membranes XP_002492992.1 1458453 D 644223 CDS PAS_chr3_0764 254571767 8200457 join(1459697..1459838,1459900..1460759) 1 NC_012965.1 Beta subunit of Type II geranylgeranyltransferase 1460759 8200457 PAS_chr3_0764 Pichia pastoris GS115 Beta subunit of Type II geranylgeranyltransferase XP_002492993.1 1459697 D 644223 CDS PAS_chr3_0765 254571769 8200458 complement(1460767..1462659) 1 NC_012965.1 Second largest subunit of DNA polymerase II (DNA polymerase epsilon) 1462659 8200458 PAS_chr3_0765 Pichia pastoris GS115 Second largest subunit of DNA polymerase II (DNA polymerase epsilon) XP_002492994.1 1460767 R 644223 CDS PAS_chr3_1217 254571771 8200459 1462973..1463737 1 NC_012965.1 hypothetical protein 1463737 8200459 PAS_chr3_1217 Pichia pastoris GS115 hypothetical protein XP_002492995.1 1462973 D 644223 CDS PAS_chr3_0766 254571773 8199655 1464043..1464636 1 NC_012965.1 Subunit of the heme-activated, glucose-repressed Hap2p/3p/4p/5p CCAAT-binding complex 1464636 8199655 PAS_chr3_0766 Pichia pastoris GS115 Subunit of the heme-activated, glucose-repressed Hap2p/3p/4p/5p CCAAT-binding complex XP_002492996.1 1464043 D 644223 CDS PAS_chr3_0767 254571775 8200460 complement(1464851..1467775) 1 NC_012965.1 Nuclear envelope protein that mediates the nuclear export of importin alpha (Srp1p) 1467775 8200460 PAS_chr3_0767 Pichia pastoris GS115 Nuclear envelope protein that mediates the nuclear export of importin alpha (Srp1p) XP_002492997.1 1464851 R 644223 CDS PAS_chr3_1218 254571777 8200461 complement(join(1467901..1468428,1468484..1468534)) 1 NC_012965.1 hypothetical protein 1468534 8200461 PAS_chr3_1218 Pichia pastoris GS115 hypothetical protein XP_002492998.1 1467901 R 644223 CDS PAS_chr3_0768 254571779 8199656 complement(1468657..1469994) 1 NC_012965.1 Protein involved in the regulation of cell wall synthesis 1469994 8199656 PAS_chr3_0768 Pichia pastoris GS115 Protein involved in the regulation of cell wall synthesis XP_002492999.1 1468657 R 644223 CDS PAS_chr3_0769 254571781 8200462 1470208..1471188 1 NC_012965.1 Putative mitochondrial transport protein 1471188 8200462 PAS_chr3_0769 Pichia pastoris GS115 Putative mitochondrial transport protein XP_002493000.1 1470208 D 644223 CDS PAS_chr3_0770 254571783 8200463 complement(1471209..1473569) 1 NC_012965.1 Bifunctional enzyme of the 'de novo' purine nucleotide biosynthetic pathway 1473569 8200463 PAS_chr3_0770 Pichia pastoris GS115 Bifunctional enzyme of the 'de novo' purine nucleotide biosynthetic pathway XP_002493001.1 1471209 R 644223 CDS PAS_chr3_0771 254571785 8200464 1474318..1475433 1 NC_012965.1 hypothetical protein 1475433 8200464 PAS_chr3_0771 Pichia pastoris GS115 hypothetical protein XP_002493002.1 1474318 D 644223 CDS PAS_chr3_0772 254571787 8200465 1476020..1477756 1 NC_012965.1 hypothetical protein 1477756 8200465 PAS_chr3_0772 Pichia pastoris GS115 hypothetical protein XP_002493003.1 1476020 D 644223 CDS PAS_chr3_0773 254571789 8200466 complement(1477804..1480029) 1 NC_012965.1 hypothetical protein 1480029 8200466 PAS_chr3_0773 Pichia pastoris GS115 hypothetical protein XP_002493004.1 1477804 R 644223 CDS PAS_chr3_0774 254571791 8200467 complement(1480269..1482701) 1 NC_012965.1 Subunit of the eukaryotic translation initiation factor 3 (eIF3) 1482701 8200467 PAS_chr3_0774 Pichia pastoris GS115 Subunit of the eukaryotic translation initiation factor 3 (eIF3) XP_002493005.1 1480269 R 644223 CDS PAS_chr3_0775 254571793 8200468 1483059..1484147 1 NC_012965.1 Protein required for thiolation of the uridine at the wobble position of Gln, Lys, and Glu tRNAs 1484147 8200468 PAS_chr3_0775 Pichia pastoris GS115 Protein required for thiolation of the uridine at the wobble position of Gln, Lys, and Glu tRNAs XP_002493006.1 1483059 D 644223 CDS PAS_chr3_0776 254571795 8200469 complement(1484225..1490554) 1 NC_012965.1 Proteosome activator subunit 1490554 8200469 PAS_chr3_0776 Pichia pastoris GS115 Proteosome activator subunit XP_002493007.1 1484225 R 644223 CDS PAS_chr3_0777 254571797 8200470 complement(1490828..1492477) 1 NC_012965.1 Putative protein of unknown function 1492477 8200470 PAS_chr3_0777 Pichia pastoris GS115 Putative protein of unknown function XP_002493008.1 1490828 R 644223 CDS PAS_chr3_0778 254571799 8200471 1493605..1495158 1 NC_012965.1 hypothetical protein 1495158 8200471 PAS_chr3_0778 Pichia pastoris GS115 hypothetical protein XP_002493009.1 1493605 D 644223 CDS PAS_chr3_1219 254571801 8200472 complement(1495256..1495471) 1 NC_012965.1 hypothetical protein 1495471 8200472 PAS_chr3_1219 Pichia pastoris GS115 hypothetical protein XP_002493010.1 1495256 R 644223 CDS PAS_chr3_0779 254571803 8199657 complement(1495710..1496294) 1 NC_012965.1 Ubiquitin-conjugating enzyme that negatively regulates gluconeogenesis 1496294 8199657 PAS_chr3_0779 Pichia pastoris GS115 Ubiquitin-conjugating enzyme that negatively regulates gluconeogenesis XP_002493011.1 1495710 R 644223 CDS PAS_chr3_1220 254571805 8200473 complement(1496456..1497094) 1 NC_012965.1 hypothetical protein 1497094 8200473 PAS_chr3_1220 Pichia pastoris GS115 hypothetical protein XP_002493012.1 1496456 R 644223 CDS PAS_chr3_0780 254571807 8199658 1497238..1497528 1 NC_012965.1 hypothetical protein 1497528 8199658 PAS_chr3_0780 Pichia pastoris GS115 hypothetical protein XP_002493013.1 1497238 D 644223 CDS PAS_chr3_0781 254571809 8200474 complement(1497578..1499689) 1 NC_012965.1 Glycogen synthase, similar to Gsy1p 1499689 8200474 PAS_chr3_0781 Pichia pastoris GS115 Glycogen synthase, similar to Gsy1p XP_002493014.1 1497578 R 644223 CDS PAS_chr3_1221 254571811 8200475 1500005..1501771 1 NC_012965.1 hypothetical protein 1501771 8200475 PAS_chr3_1221 Pichia pastoris GS115 hypothetical protein XP_002493015.1 1500005 D 644223 CDS PAS_chr3_0782 254571813 8199659 1501900..1504281 1 NC_012965.1 Nucleolar protein, component of the small subunit (SSU) processome 1504281 8199659 PAS_chr3_0782 Pichia pastoris GS115 Nucleolar protein, component of the small subunit (SSU) processome XP_002493016.1 1501900 D 644223 CDS PAS_chr3_0783 254571815 8200476 complement(1504320..1505093) 1 NC_012965.1 Cytoplasmic glyoxalase II 1505093 8200476 PAS_chr3_0783 Pichia pastoris GS115 Cytoplasmic glyoxalase II XP_002493017.1 1504320 R 644223 CDS PAS_chr3_0784 254571817 8200477 1505477..1507423 1 NC_012965.1 hypothetical protein 1507423 8200477 PAS_chr3_0784 Pichia pastoris GS115 hypothetical protein XP_002493018.1 1505477 D 644223 CDS PAS_chr3_0785 254571819 8200478 1507574..1508134 1 NC_012965.1 Putative protein of unknown function 1508134 8200478 PAS_chr3_0785 Pichia pastoris GS115 Putative protein of unknown function XP_002493019.1 1507574 D 644223 CDS PAS_chr3_0787 254571821 8200479 complement(1508840..1510579) 1 NC_012965.1 Alpha-1,2-mannosyltransferase 1510579 8200479 PAS_chr3_0787 Pichia pastoris GS115 Alpha-1,2-mannosyltransferase XP_002493020.1 1508840 R 644223 CDS PAS_chr3_0788 254571823 8200480 complement(1510824..1511498) 1 NC_012965.1 Imidazoleglycerol-phosphate dehydratase, catalyzes the sixth step in histidine biosynthesis 1511498 8200480 PAS_chr3_0788 Pichia pastoris GS115 Imidazoleglycerol-phosphate dehydratase, catalyzes the sixth step in histidine biosynthesis XP_002493021.1 1510824 R 644223 CDS PAS_chr3_0789 254571825 8200481 1511657..1512850 1 NC_012965.1 Ribose methyltransferase 1512850 8200481 PAS_chr3_0789 Pichia pastoris GS115 Ribose methyltransferase XP_002493022.1 1511657 D 644223 CDS PAS_chr3_0790 254571827 8200482 complement(1512923..1513939) 1 NC_012965.1 Mitochondrial ribosomal protein of the small subunit 1513939 8200482 PAS_chr3_0790 Pichia pastoris GS115 Mitochondrial ribosomal protein of the small subunit XP_002493023.1 1512923 R 644223 CDS PAS_chr3_0791 254571829 8200483 1514220..1516349 1 NC_012965.1 Protein kinase of the PAK/Ste20 kinase family 1516349 8200483 PAS_chr3_0791 Pichia pastoris GS115 Protein kinase of the PAK/Ste20 kinase family XP_002493024.1 1514220 D 644223 CDS PAS_chr3_0792 254571831 8200484 complement(1516356..1518434) 1 NC_012965.1 Mitochondrial external NADH dehydrogenase, a type II NAD(P)H:quinone oxidoreductase 1518434 8200484 PAS_chr3_0792 Pichia pastoris GS115 Mitochondrial external NADH dehydrogenase, a type II NAD(P)H:quinone oxidoreductase XP_002493025.1 1516356 R 644223 CDS PAS_chr3_0794 254571833 8200485 1519267..1520871 1 NC_012965.1 hypothetical protein 1520871 8200485 PAS_chr3_0794 Pichia pastoris GS115 hypothetical protein XP_002493026.1 1519267 D 644223 CDS PAS_chr3_1222 254571835 8200486 1521053..1522573 1 NC_012965.1 hypothetical protein 1522573 8200486 PAS_chr3_1222 Pichia pastoris GS115 hypothetical protein XP_002493027.1 1521053 D 644223 CDS PAS_chr3_0795 254571837 8199660 complement(join(1522619..1523807,1523914..1523960)) 1 NC_012965.1 Protein involved in the organization of the actin cytoskeleton 1523960 8199660 PAS_chr3_0795 Pichia pastoris GS115 Protein involved in the organization of the actin cytoskeleton XP_002493028.1 1522619 R 644223 CDS PAS_chr3_0796 254571839 8200487 1525096..1526496 1 NC_012965.1 hypothetical protein 1526496 8200487 PAS_chr3_0796 Pichia pastoris GS115 hypothetical protein XP_002493029.1 1525096 D 644223 CDS PAS_chr3_0797 254571841 8200488 1526637..1528328 1 NC_012965.1 DNA polymerase IV 1528328 8200488 PAS_chr3_0797 Pichia pastoris GS115 DNA polymerase IV XP_002493030.1 1526637 D 644223 CDS PAS_chr3_0798 254571843 8200489 1528808..1529554 1 NC_012965.1 hypothetical protein 1529554 8200489 PAS_chr3_0798 Pichia pastoris GS115 hypothetical protein XP_002493031.1 1528808 D 644223 CDS PAS_chr3_0799 254571845 8200490 1530065..1533496 1 NC_012965.1 Large subunit of carbamoyl phosphate synthetase 1533496 8200490 PAS_chr3_0799 Pichia pastoris GS115 Large subunit of carbamoyl phosphate synthetase XP_002493032.1 1530065 D 644223 CDS PAS_chr3_0801 254571847 8200491 1542766..1545528 1 NC_012965.1 Cytoplasmic GTPase-activating protein for Ypt/Rab transport GTPases Ypt6p, Ypt31p and Sec4p 1545528 8200491 PAS_chr3_0801 Pichia pastoris GS115 Cytoplasmic GTPase-activating protein for Ypt/Rab transport GTPases Ypt6p, Ypt31p and Sec4p XP_002493033.1 1542766 D 644223 CDS PAS_chr3_0802 254571849 8200492 complement(1545866..1548223) 1 NC_012965.1 hypothetical protein 1548223 8200492 PAS_chr3_0802 Pichia pastoris GS115 hypothetical protein XP_002493034.1 1545866 R 644223 CDS PAS_chr3_0803 254571851 8200493 1548562..1550220 1 NC_012965.1 Vacuolar aminopeptidase 1550220 8200493 PAS_chr3_0803 Pichia pastoris GS115 Vacuolar aminopeptidase XP_002493035.1 1548562 D 644223 CDS PAS_chr3_0804 254571853 8200494 complement(1550217..1551320) 1 NC_012965.1 Putative protein of unknown function 1551320 8200494 PAS_chr3_0804 Pichia pastoris GS115 Putative protein of unknown function XP_002493036.1 1550217 R 644223 CDS PAS_chr3_0805 254571855 8200495 complement(1551721..1554549) 1 NC_012965.1 hypothetical protein 1554549 8200495 PAS_chr3_0805 Pichia pastoris GS115 hypothetical protein XP_002493037.1 1551721 R 644223 CDS PAS_chr3_0806 254571857 8200496 1554936..1556027 1 NC_012965.1 hypothetical protein 1556027 8200496 PAS_chr3_0806 Pichia pastoris GS115 hypothetical protein XP_002493038.1 1554936 D 644223 CDS PAS_chr3_0807 254571859 8200497 complement(1556106..1556555) 1 NC_012965.1 Mitochondrial intermembrane space cysteine motif protein 1556555 8200497 PAS_chr3_0807 Pichia pastoris GS115 Mitochondrial intermembrane space cysteine motif protein XP_002493039.1 1556106 R 644223 CDS PAS_chr3_0808 254571861 8200498 1556985..1558433 1 NC_012965.1 hypothetical protein 1558433 8200498 PAS_chr3_0808 Pichia pastoris GS115 hypothetical protein XP_002493040.1 1556985 D 644223 CDS PAS_chr3_0809 254571863 8200499 complement(1558714..1559577) 1 NC_012965.1 hypothetical protein 1559577 8200499 PAS_chr3_0809 Pichia pastoris GS115 hypothetical protein XP_002493041.1 1558714 R 644223 CDS PAS_chr3_0810 254571865 8200304 complement(1560208..1561251) 1 NC_012965.1 Major apurinic/apyrimidinic endonuclease, 3'-repair diesterase involved in repair of DNA damage 1561251 8200304 PAS_chr3_0810 Pichia pastoris GS115 Major apurinic/apyrimidinic endonuclease, 3'-repair diesterase involved in repair of DNA damage XP_002493042.1 1560208 R 644223 CDS PAS_chr3_0811 254571867 8200305 complement(1561410..1562642) 1 NC_012965.1 hypothetical protein 1562642 8200305 PAS_chr3_0811 Pichia pastoris GS115 hypothetical protein XP_002493043.1 1561410 R 644223 CDS PAS_chr3_0812 254571869 8200306 join(1562821..1562827,1562888..1564149) 1 NC_012965.1 hypothetical protein 1564149 8200306 PAS_chr3_0812 Pichia pastoris GS115 hypothetical protein XP_002493044.1 1562821 D 644223 CDS PAS_chr3_0813 254571871 8200307 complement(1565154..1567112) 1 NC_012965.1 hypothetical protein 1567112 8200307 PAS_chr3_0813 Pichia pastoris GS115 hypothetical protein XP_002493045.1 1565154 R 644223 CDS PAS_chr3_0814 254571873 8200308 1567284..1569071 1 NC_012965.1 hypothetical protein 1569071 8200308 PAS_chr3_0814 Pichia pastoris GS115 hypothetical protein XP_002493046.1 1567284 D 644223 CDS PAS_chr3_0815 254571875 8200309 complement(1569077..1571593) 1 NC_012965.1 Protein of unknown function involved in vacuolar protein sorting 1571593 8200309 PAS_chr3_0815 Pichia pastoris GS115 Protein of unknown function involved in vacuolar protein sorting XP_002493047.1 1569077 R 644223 CDS PAS_chr3_0816 254571877 8200310 complement(1571898..1575308) 1 NC_012965.1 Component of the polarisome 1575308 8200310 PAS_chr3_0816 Pichia pastoris GS115 Component of the polarisome XP_002493048.1 1571898 R 644223 CDS PAS_chr3_0817 254571879 8200311 complement(1575591..1576217) 1 NC_012965.1 Mitochondrial ribosomal protein of the large subunit 1576217 8200311 PAS_chr3_0817 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002493049.1 1575591 R 644223 CDS PAS_chr3_0818 254571881 8200312 1576431..1578065 1 NC_012965.1 ATP-dependent RNA helicase of the DEAD box family 1578065 8200312 PAS_chr3_0818 Pichia pastoris GS115 ATP-dependent RNA helicase of the DEAD box family XP_002493050.1 1576431 D 644223 CDS PAS_chr3_0819 254571883 8200313 complement(1578134..1578568) 1 NC_012965.1 Subunit g of the mitochondrial F1F0 ATP synthase 1578568 8200313 PAS_chr3_0819 Pichia pastoris GS115 Subunit g of the mitochondrial F1F0 ATP synthase XP_002493051.1 1578134 R 644223 CDS PAS_chr3_0821 254571885 8200314 complement(join(1580789..1581526,1581587..1581631)) 1 NC_012965.1 Protein with similarity to human cystinosin 1581631 8200314 PAS_chr3_0821 Pichia pastoris GS115 Protein with similarity to human cystinosin XP_002493052.1 1580789 R 644223 CDS PAS_chr3_0822 254571887 8200315 1582255..1584882 1 NC_012965.1 Subunit of a heterodimeric peroxisomal ATP-binding cassette transporter complex (Pxa1p-Pxa2p) 1584882 8200315 PAS_chr3_0822 Pichia pastoris GS115 Subunit of a heterodimeric peroxisomal ATP-binding cassette transporter complex (Pxa1p-Pxa2p) XP_002493053.1 1582255 D 644223 CDS PAS_chr3_1223 254571889 8200316 1585037..1586485 1 NC_012965.1 hypothetical protein 1586485 8200316 PAS_chr3_1223 Pichia pastoris GS115 hypothetical protein XP_002493054.1 1585037 D 644223 CDS PAS_chr3_0823 254571891 8199661 complement(join(1586520..1589075,1589163..1592186)) 1 NC_012965.1 Type II myosin heavy chain, required for wild-type cytokinesis and cell separation 1592186 8199661 PAS_chr3_0823 Pichia pastoris GS115 Type II myosin heavy chain, required for wild-type cytokinesis and cell separation XP_002493055.1 1586520 R 644223 CDS PAS_chr3_0824 254571893 8200317 complement(join(1592750..1592986,1593065..1593262)) 1 NC_012965.1 Subunit VI of cytochrome c oxidase 1593262 8200317 PAS_chr3_0824 Pichia pastoris GS115 Subunit VI of cytochrome c oxidase XP_002493056.1 1592750 R 644223 CDS PAS_chr3_1224 254571895 8200318 complement(1593718..1596207) 1 NC_012965.1 hypothetical protein 1596207 8200318 PAS_chr3_1224 Pichia pastoris GS115 hypothetical protein XP_002493057.1 1593718 R 644223 CDS PAS_chr3_0825 254571897 8199662 complement(1596446..1598761) 1 NC_012965.1 Essential component of the nuclear pore complex, which mediates nuclear import and export 1598761 8199662 PAS_chr3_0825 Pichia pastoris GS115 Essential component of the nuclear pore complex, which mediates nuclear import and export XP_002493058.1 1596446 R 644223 CDS PAS_chr3_0826 254571899 8200319 1599170..1599916 1 NC_012965.1 Tetrameric phosphoglycerate mutase 1599916 8200319 PAS_chr3_0826 Pichia pastoris GS115 Tetrameric phosphoglycerate mutase XP_002493059.1 1599170 D 644223 CDS PAS_chr3_0829 254571901 8200320 1603508..1603876 1 NC_012965.1 hypothetical protein 1603876 8200320 PAS_chr3_0829 Pichia pastoris GS115 hypothetical protein XP_002493060.1 1603508 D 644223 CDS PAS_chr3_0831 254571903 8200321 1605170..1606132 1 NC_012965.1 Alpha subunit of succinyl-CoA ligase 1606132 8200321 PAS_chr3_0831 Pichia pastoris GS115 Alpha subunit of succinyl-CoA ligase XP_002493061.1 1605170 D 644223 CDS PAS_chr3_1225 254571905 8200322 complement(1606204..1608381) 1 NC_012965.1 hypothetical protein 1608381 8200322 PAS_chr3_1225 Pichia pastoris GS115 hypothetical protein XP_002493062.1 1606204 R 644223 CDS PAS_chr3_0832 254571907 8199663 complement(1608584..1610707) 1 NC_012965.1 Transketolase, similar to Tkl2p 1610707 8199663 PAS_chr3_0832 Pichia pastoris GS115 Transketolase, similar to Tkl2p XP_002493063.1 1608584 R 644223 CDS PAS_chr3_0833 254571909 8200323 1611807..1612643 1 NC_012965.1 Amphiphysin-like lipid raft protein 1612643 8200323 PAS_chr3_0833 Pichia pastoris GS115 Amphiphysin-like lipid raft protein XP_002493064.1 1611807 D 644223 CDS PAS_chr3_0834 254571911 8200324 1613196..1615319 1 NC_012965.1 Transketolase, similar to Tkl2p 1615319 8200324 PAS_chr3_0834 Pichia pastoris GS115 Transketolase, similar to Tkl2p XP_002493065.1 1613196 D 644223 CDS PAS_chr3_0836 254571913 8200325 1617105..1619771 1 NC_012965.1 hypothetical protein 1619771 8200325 PAS_chr3_0836 Pichia pastoris GS115 hypothetical protein XP_002493066.1 1617105 D 644223 CDS PAS_chr3_0837 254571915 8200326 complement(1619969..1620283) 1 NC_012965.1 hypothetical protein 1620283 8200326 PAS_chr3_0837 Pichia pastoris GS115 hypothetical protein XP_002493067.1 1619969 R 644223 CDS PAS_chr3_0838 254571917 8200327 complement(join(1621111..1622069,1622118..1622142)) 1 NC_012965.1 Twinfilin, highly conserved actin monomer-sequestering protein 1622142 8200327 PAS_chr3_0838 Pichia pastoris GS115 Twinfilin, highly conserved actin monomer-sequestering protein XP_002493068.1 1621111 R 644223 CDS PAS_chr3_0839 254571919 8200328 1622532..1624106 1 NC_012965.1 Gamma subunit of the translation initiation factor eIF2 1624106 8200328 PAS_chr3_0839 Pichia pastoris GS115 Gamma subunit of the translation initiation factor eIF2 XP_002493069.1 1622532 D 644223 CDS PAS_chr3_0840 254571921 8200329 complement(1624160..1625971) 1 NC_012965.1 GTPase-activating protein for Gpa1p, regulates desensitization to alpha factor pheromone 1625971 8200329 PAS_chr3_0840 Pichia pastoris GS115 GTPase-activating protein for Gpa1p, regulates desensitization to alpha factor pheromone XP_002493070.1 1624160 R 644223 CDS PAS_chr3_0841 254571923 8200330 1626575..1628401 1 NC_012965.1 Dihydroxyacetone kinase, required for detoxification of dihydroxyacetone (DHA) 1628401 8200330 PAS_chr3_0841 Pichia pastoris GS115 Dihydroxyacetone kinase, required for detoxification of dihydroxyacetone (DHA) XP_002493071.1 1626575 D 644223 CDS PAS_chr3_0842 254571925 8200331 1628960..1630621 1 NC_012965.1 Multifunctional protein with both hydroxymethylpyrimidine kinase and thiaminase activities 1630621 8200331 PAS_chr3_0842 Pichia pastoris GS115 Multifunctional protein with both hydroxymethylpyrimidine kinase and thiaminase activities XP_002493072.1 1628960 D 644223 CDS PAS_chr3_0843 254571927 8200332 1630786..1632468 1 NC_012965.1 Bifunctional enzyme 1632468 8200332 PAS_chr3_0843 Pichia pastoris GS115 Bifunctional enzyme XP_002493073.1 1630786 D 644223 CDS PAS_chr3_0844 254571929 8200333 1632655..1633647 1 NC_012965.1 Phosphatidylinositol transfer protein (PITP) 1633647 8200333 PAS_chr3_0844 Pichia pastoris GS115 Phosphatidylinositol transfer protein (PITP) XP_002493074.1 1632655 D 644223 CDS PAS_chr3_0845 254571931 8200334 complement(1633699..1634901) 1 NC_012965.1 Lyso-phosphatidylcholine acyltransferase 1634901 8200334 PAS_chr3_0845 Pichia pastoris GS115 Lyso-phosphatidylcholine acyltransferase XP_002493075.1 1633699 R 644223 CDS PAS_chr3_0846 254571933 8200335 complement(1636515..1639499) 1 NC_012965.1 Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA metabolism 1639499 8200335 PAS_chr3_0846 Pichia pastoris GS115 Nuclear 5' to 3' single-stranded RNA exonuclease, involved in RNA metabolism XP_002493076.1 1636515 R 644223 CDS PAS_chr3_0847 254571935 8200336 1639837..1641312 1 NC_012965.1 hypothetical protein 1641312 8200336 PAS_chr3_0847 Pichia pastoris GS115 hypothetical protein XP_002493077.1 1639837 D 644223 CDS PAS_chr3_0848 254571937 8200337 1642296..1644008 1 NC_012965.1 High affinity polyamine permease 1644008 8200337 PAS_chr3_0848 Pichia pastoris GS115 High affinity polyamine permease XP_002493078.1 1642296 D 644223 CDS PAS_chr3_0849 254571939 8200338 1644284..1645717 1 NC_012965.1 Cytoplasmic response regulator, part of a two-component signal transducer that mediates osmosensing 1645717 8200338 PAS_chr3_0849 Pichia pastoris GS115 Cytoplasmic response regulator, part of a two-component signal transducer that mediates osmosensing XP_002493079.1 1644284 D 644223 CDS PAS_chr3_1226 254571941 8200339 complement(join(1645814..1647702,1647782..1649093)) 1 NC_012965.1 hypothetical protein 1649093 8200339 PAS_chr3_1226 Pichia pastoris GS115 hypothetical protein XP_002493080.1 1645814 R 644223 CDS PAS_chr3_0850 254571943 8199664 complement(1649331..1654412) 1 NC_012965.1 Protein kinase, phosphorylates the alpha-subunit of translation initiation factor eIF2 (Sui2p) 1654412 8199664 PAS_chr3_0850 Pichia pastoris GS115 Protein kinase, phosphorylates the alpha-subunit of translation initiation factor eIF2 (Sui2p) XP_002493081.1 1649331 R 644223 CDS PAS_chr3_0851 254571945 8200340 1654645..1656714 1 NC_012965.1 Subunit of a complex with Rad50p and Xrs2p (MRX complex) 1656714 8200340 PAS_chr3_0851 Pichia pastoris GS115 Subunit of a complex with Rad50p and Xrs2p (MRX complex) XP_002493082.1 1654645 D 644223 CDS PAS_chr3_0853 254571947 8200341 1659314..1659988 1 NC_012965.1 Ubiquitin C-terminal hydrolase 1659988 8200341 PAS_chr3_0853 Pichia pastoris GS115 Ubiquitin C-terminal hydrolase XP_002493083.1 1659314 D 644223 CDS PAS_chr3_1227 254571949 8200342 complement(1660027..1660383) 1 NC_012965.1 hypothetical protein 1660383 8200342 PAS_chr3_1227 Pichia pastoris GS115 hypothetical protein XP_002493084.1 1660027 R 644223 CDS PAS_chr3_0854 254571951 8199665 complement(1660505..1661398) 1 NC_012965.1 hypothetical protein 1661398 8199665 PAS_chr3_0854 Pichia pastoris GS115 hypothetical protein XP_002493085.1 1660505 R 644223 CDS PAS_chr3_0855 254571953 8200343 complement(1661559..1662950) 1 NC_012965.1 Smaller subunit of the mitochondrial processing protease (MPP) 1662950 8200343 PAS_chr3_0855 Pichia pastoris GS115 Smaller subunit of the mitochondrial processing protease (MPP) XP_002493086.1 1661559 R 644223 CDS PAS_chr3_0856 254571955 8200344 1663368..1666457 1 NC_012965.1 Ubiquitin activating enzyme (E1), involved in ubiquitin-mediated protein degradation 1666457 8200344 PAS_chr3_0856 Pichia pastoris GS115 Ubiquitin activating enzyme (E1), involved in ubiquitin-mediated protein degradation XP_002493087.1 1663368 D 644223 CDS PAS_chr3_1228 254571957 8200345 1666612..1667214 1 NC_012965.1 hypothetical protein 1667214 8200345 PAS_chr3_1228 Pichia pastoris GS115 hypothetical protein XP_002493088.1 1666612 D 644223 CDS PAS_chr3_0857 254571959 8199666 1668133..1669518 1 NC_012965.1 Flavin-containing monooxygenase, localized to the cytoplasmic face of the ER membrane 1669518 8199666 PAS_chr3_0857 Pichia pastoris GS115 Flavin-containing monooxygenase, localized to the cytoplasmic face of the ER membrane XP_002493089.1 1668133 D 644223 CDS PAS_chr3_1229 254571961 8200346 complement(1670074..1672770) 1 NC_012965.1 hypothetical protein 1672770 8200346 PAS_chr3_1229 Pichia pastoris GS115 hypothetical protein XP_002493090.1 1670074 R 644223 CDS PAS_chr3_0858 254571963 8199667 complement(1672893..1676657) 1 NC_012965.1 Plasma membrane ATP-binding cassette (ABC) transporter required for the export of a-factor 1676657 8199667 PAS_chr3_0858 Pichia pastoris GS115 Plasma membrane ATP-binding cassette (ABC) transporter required for the export of a-factor XP_002493091.1 1672893 R 644223 CDS PAS_chr3_0859 254571965 8200347 join(1676952..1677024,1677085..1677650) 1 NC_012965.1 Phospholipid methyltransferase (methylene-fatty-acyl-phospholipid synthase) 1677650 8200347 PAS_chr3_0859 Pichia pastoris GS115 Phospholipid methyltransferase (methylene-fatty-acyl-phospholipid synthase) XP_002493092.1 1676952 D 644223 CDS PAS_chr3_0860 254571967 8200348 1678096..1678518 1 NC_012965.1 hypothetical protein 1678518 8200348 PAS_chr3_0860 Pichia pastoris GS115 hypothetical protein XP_002493093.1 1678096 D 644223 CDS PAS_chr3_0861 254571969 8200349 1678632..1679762 1 NC_012965.1 Receptor for a factor receptor, transcribed in alpha cells and required for mating by alpha cells 1679762 8200349 PAS_chr3_0861 Pichia pastoris GS115 Receptor for a factor receptor, transcribed in alpha cells and required for mating by alpha cells XP_002493094.1 1678632 D 644223 CDS PAS_chr3_0862 254571971 8200350 complement(1679857..1680240) 1 NC_012965.1 Single-stranded DNA-binding protein essential for mitochondrial genome maintenance 1680240 8200350 PAS_chr3_0862 Pichia pastoris GS115 Single-stranded DNA-binding protein essential for mitochondrial genome maintenance XP_002493095.1 1679857 R 644223 CDS PAS_chr3_1230 254571973 8200351 1681465..1682619 1 NC_012965.1 ATG30 1682619 8200351 PAS_chr3_1230 Pichia pastoris GS115 ATG30 XP_002493096.1 1681465 D 644223 CDS PAS_chr3_0864 254571975 8199668 1682776..1684470 1 NC_012965.1 hypothetical protein 1684470 8199668 PAS_chr3_0864 Pichia pastoris GS115 hypothetical protein XP_002493097.1 1682776 D 644223 CDS PAS_chr3_0865 254571977 8200352 join(1684698..1686051,1686168..1687345) 1 NC_012965.1 Protein with a potential role in actin cytoskeletal organization 1687345 8200352 PAS_chr3_0865 Pichia pastoris GS115 Protein with a potential role in actin cytoskeletal organization XP_002493098.1 1684698 D 644223 CDS PAS_chr3_0866 254571979 8200353 complement(1687414..1689252) 1 NC_012965.1 Aspartic protease, attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor 1689252 8200353 PAS_chr3_0866 Pichia pastoris GS115 Aspartic protease, attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor XP_002493099.1 1687414 R 644223 CDS PAS_chr3_0867 254571981 8200354 1689813..1690712 1 NC_012965.1 Non-essential intracellular esterase that can function as an S-formylglutathione hydrolase 1690712 8200354 PAS_chr3_0867 Pichia pastoris GS115 Non-essential intracellular esterase that can function as an S-formylglutathione hydrolase XP_002493100.1 1689813 D 644223 CDS PAS_chr3_1231 254571983 8200355 complement(1690750..1691265) 1 NC_012965.1 hypothetical protein 1691265 8200355 PAS_chr3_1231 Pichia pastoris GS115 hypothetical protein XP_002493101.1 1690750 R 644223 CDS PAS_chr3_1232 254571985 8199669 1691933..1692520 1 NC_012965.1 hypothetical protein 1692520 8199669 PAS_chr3_1232 Pichia pastoris GS115 hypothetical protein XP_002493102.1 1691933 D 644223 CDS PAS_chr3_0868 254571987 8199670 complement(1692961..1694022) 1 NC_012965.1 Fructose-1,6-bisphosphatase, key regulatory enzyme in the gluconeogenesis pathway 1694022 8199670 PAS_chr3_0868 Pichia pastoris GS115 Fructose-1,6-bisphosphatase, key regulatory enzyme in the gluconeogenesis pathway XP_002493103.1 1692961 R 644223 CDS PAS_chr3_0869 254571989 8200356 1694661..1695083 1 NC_012965.1 hypothetical protein 1695083 8200356 PAS_chr3_0869 Pichia pastoris GS115 hypothetical protein XP_002493104.1 1694661 D 644223 CDS PAS_chr3_0870 254571991 8200357 1695718..1696812 1 NC_012965.1 GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase) 1696812 8200357 PAS_chr3_0870 Pichia pastoris GS115 GDP-mannose pyrophosphorylase (mannose-1-phosphate guanyltransferase) XP_002493105.1 1695718 D 644223 CDS PAS_chr3_1233 254571993 8199699 1696980..1700645 1 NC_012965.1 hypothetical protein 1700645 8199699 PAS_chr3_1233 Pichia pastoris GS115 hypothetical protein XP_002493106.1 1696980 D 644223 CDS PAS_chr3_0871 254571995 8199671 complement(1701136..1703385) 1 NC_012965.1 hypothetical protein 1703385 8199671 PAS_chr3_0871 Pichia pastoris GS115 hypothetical protein XP_002493107.1 1701136 R 644223 CDS PAS_chr3_0872 254571997 8200228 complement(1703535..1703942) 1 NC_012965.1 hypothetical protein 1703942 8200228 PAS_chr3_0872 Pichia pastoris GS115 hypothetical protein XP_002493108.1 1703535 R 644223 CDS PAS_chr3_0873 254571999 8200229 1704142..1706145 1 NC_012965.1 Serine-threonine protein kinase that is part of a glucose-sensing system 1706145 8200229 PAS_chr3_0873 Pichia pastoris GS115 Serine-threonine protein kinase that is part of a glucose-sensing system XP_002493109.1 1704142 D 644223 CDS PAS_chr3_0874 254572001 8200230 1706282..1707823 1 NC_012965.1 Peroxisomal integral membrane peroxin 1707823 8200230 PAS_chr3_0874 Pichia pastoris GS115 Peroxisomal integral membrane peroxin XP_002493110.1 1706282 D 644223 CDS PAS_chr3_0875 254572003 8200231 1707948..1708949 1 NC_012965.1 Protein localized to COPII-coated vesicles, forms a complex with Erv46p 1708949 8200231 PAS_chr3_0875 Pichia pastoris GS115 Protein localized to COPII-coated vesicles, forms a complex with Erv46p XP_002493111.1 1707948 D 644223 CDS PAS_chr3_0876 254572005 8200232 1709987..1711141 1 NC_012965.1 S-adenosylmethionine synthetase 1711141 8200232 PAS_chr3_0876 Pichia pastoris GS115 S-adenosylmethionine synthetase XP_002493112.1 1709987 D 644223 CDS PAS_chr3_0877 254572007 8200233 1711661..1713097 1 NC_012965.1 Protein with a potential role in cell survival pathways, required for the diauxic growth shift 1713097 8200233 PAS_chr3_0877 Pichia pastoris GS115 Protein with a potential role in cell survival pathways, required for the diauxic growth shift XP_002493113.1 1711661 D 644223 CDS PAS_chr3_1234 254572009 8200234 1713475..1714647 1 NC_012965.1 hypothetical protein 1714647 8200234 PAS_chr3_1234 Pichia pastoris GS115 hypothetical protein XP_002493114.1 1713475 D 644223 CDS PAS_chr3_0878 254572011 8199672 complement(1715226..1716713) 1 NC_012965.1 hypothetical protein 1716713 8199672 PAS_chr3_0878 Pichia pastoris GS115 hypothetical protein XP_002493115.1 1715226 R 644223 CDS PAS_chr3_0880 254572013 8200235 1718448..1719509 1 NC_012965.1 Mitochondrial inner membrane protein required for normal mitochondrial morphology 1719509 8200235 PAS_chr3_0880 Pichia pastoris GS115 Mitochondrial inner membrane protein required for normal mitochondrial morphology XP_002493116.1 1718448 D 644223 CDS PAS_chr3_0881 254572015 8200236 1719672..1720910 1 NC_012965.1 One of six ATPases of the 19S regulatory particle of the 26S proteasome 1720910 8200236 PAS_chr3_0881 Pichia pastoris GS115 One of six ATPases of the 19S regulatory particle of the 26S proteasome XP_002493117.1 1719672 D 644223 CDS PAS_chr3_0882 254572017 8200237 complement(1720973..1722397) 1 NC_012965.1 Alpha 1,2-mannosyltransferase involved in glycosyl phosphatidyl inositol (GPI) biosynthesis 1722397 8200237 PAS_chr3_0882 Pichia pastoris GS115 Alpha 1,2-mannosyltransferase involved in glycosyl phosphatidyl inositol (GPI) biosynthesis XP_002493118.1 1720973 R 644223 CDS PAS_chr3_0883 254572019 8200238 1722558..1725317 1 NC_012965.1 Nuclear transport factor (karyopherin) 1725317 8200238 PAS_chr3_0883 Pichia pastoris GS115 Nuclear transport factor (karyopherin) XP_002493119.1 1722558 D 644223 CDS PAS_chr3_0884 254572021 8200239 complement(1725468..1725893) 1 NC_012965.1 Subunit of a heterodimeric NC2 transcription regulator complex with Bur6p 1725893 8200239 PAS_chr3_0884 Pichia pastoris GS115 Subunit of a heterodimeric NC2 transcription regulator complex with Bur6p XP_002493120.1 1725468 R 644223 CDS PAS_chr3_0885 254572023 8200240 1726152..1727957 1 NC_012965.1 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA 1727957 8200240 PAS_chr3_0885 Pichia pastoris GS115 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA XP_002493121.1 1726152 D 644223 CDS PAS_chr3_0886 254572025 8200241 1728210..1728662 1 NC_012965.1 hypothetical protein 1728662 8200241 PAS_chr3_0886 Pichia pastoris GS115 hypothetical protein XP_002493122.1 1728210 D 644223 CDS PAS_chr3_0887 254572027 8200242 1728780..1729409 1 NC_012965.1 Dimeric hypoxanthine-guanine phosphoribosyltransferase 1729409 8200242 PAS_chr3_0887 Pichia pastoris GS115 Dimeric hypoxanthine-guanine phosphoribosyltransferase XP_002493123.1 1728780 D 644223 CDS PAS_chr3_0888 254572029 8200243 complement(1729435..1730964) 1 NC_012965.1 Putative transporter, member of the sugar porter family 1730964 8200243 PAS_chr3_0888 Pichia pastoris GS115 Putative transporter, member of the sugar porter family XP_002493124.1 1729435 R 644223 CDS PAS_chr3_0889 254572031 8200244 1731256..1731558 1 NC_012965.1 hypothetical protein 1731558 8200244 PAS_chr3_0889 Pichia pastoris GS115 hypothetical protein XP_002493125.1 1731256 D 644223 CDS PAS_chr3_0890 254572033 8200245 1731645..1732982 1 NC_012965.1 S-adenosyl-L-homocysteine hydrolase 1732982 8200245 PAS_chr3_0890 Pichia pastoris GS115 S-adenosyl-L-homocysteine hydrolase XP_002493126.1 1731645 D 644223 CDS PAS_chr3_0891 254572035 8200246 join(1733289..1733881,1733999..1735535) 1 NC_012965.1 Alpha mannosidase-like protein of the endoplasmic reticulum required for degradation of glycoprotein 1735535 8200246 PAS_chr3_0891 Pichia pastoris GS115 Alpha mannosidase-like protein of the endoplasmic reticulum required for degradation of glycoprotein XP_002493127.1 1733289 D 644223 CDS PAS_chr3_0893 254572037 8200247 1736089..1738140 1 NC_012965.1 Protein kinase involved in transcriptional activation of osmostress-responsive genes 1738140 8200247 PAS_chr3_0893 Pichia pastoris GS115 Protein kinase involved in transcriptional activation of osmostress-responsive genes XP_002493128.1 1736089 D 644223 CDS PAS_chr3_1235 254572039 8200248 1738626..1740176 1 NC_012965.1 hypothetical protein 1740176 8200248 PAS_chr3_1235 Pichia pastoris GS115 hypothetical protein XP_002493129.1 1738626 D 644223 CDS PAS_chr3_0894 254572041 8199673 complement(1740261..1741655) 1 NC_012965.1 Zinc-finger protein of unknown function 1741655 8199673 PAS_chr3_0894 Pichia pastoris GS115 Zinc-finger protein of unknown function XP_002493130.1 1740261 R 644223 CDS PAS_chr3_0895 254572043 8200249 1742705..1743985 1 NC_012965.1 Serine/threonine MAP kinase 1743985 8200249 PAS_chr3_0895 Pichia pastoris GS115 Serine/threonine MAP kinase XP_002493131.1 1742705 D 644223 CDS PAS_chr3_0896 254572045 8200250 complement(1744031..1746481) 1 NC_012965.1 Dipeptidyl aminopeptidase, synthesized as a glycosylated precursor 1746481 8200250 PAS_chr3_0896 Pichia pastoris GS115 Dipeptidyl aminopeptidase, synthesized as a glycosylated precursor XP_002493132.1 1744031 R 644223 CDS PAS_chr3_0897 254572047 8200251 1746807..1748159 1 NC_012965.1 hypothetical protein 1748159 8200251 PAS_chr3_0897 Pichia pastoris GS115 hypothetical protein XP_002493133.1 1746807 D 644223 CDS PAS_chr3_0898 254572049 8200252 1748452..1751199 1 NC_012965.1 Non-ATPase base subunit of the 19S regulatory particle of the 26S proteasome 1751199 8200252 PAS_chr3_0898 Pichia pastoris GS115 Non-ATPase base subunit of the 19S regulatory particle of the 26S proteasome XP_002493134.1 1748452 D 644223 CDS PAS_chr3_1236 254572051 8200253 complement(join(1751359..1751897,1751982..1752036)) 1 NC_012965.1 hypothetical protein 1752036 8200253 PAS_chr3_1236 Pichia pastoris GS115 hypothetical protein XP_002493135.1 1751359 R 644223 CDS PAS_chr3_0899 254572053 8199674 complement(1752232..1753296) 1 NC_012965.1 Homoserine kinase, conserved protein required for threonine biosynthesis 1753296 8199674 PAS_chr3_0899 Pichia pastoris GS115 Homoserine kinase, conserved protein required for threonine biosynthesis XP_002493136.1 1752232 R 644223 CDS PAS_chr3_0900 254572055 8200254 complement(1753628..1754413) 1 NC_012965.1 Putative protein of unknown function 1754413 8200254 PAS_chr3_0900 Pichia pastoris GS115 Putative protein of unknown function XP_002493137.1 1753628 R 644223 CDS PAS_chr3_0901 254572057 8200255 complement(1754500..1756107) 1 NC_012965.1 hypothetical protein 1756107 8200255 PAS_chr3_0901 Pichia pastoris GS115 hypothetical protein XP_002493138.1 1754500 R 644223 CDS PAS_chr3_0902 254572059 8200256 complement(1756336..1757682) 1 NC_012965.1 hypothetical protein 1757682 8200256 PAS_chr3_0902 Pichia pastoris GS115 hypothetical protein XP_002493139.1 1756336 R 644223 CDS PAS_chr3_0903 254572061 8200257 complement(1757812..1758981) 1 NC_012965.1 Nucleolar protein 1758981 8200257 PAS_chr3_0903 Pichia pastoris GS115 Nucleolar protein XP_002493140.1 1757812 R 644223 CDS PAS_chr3_1237 254572063 8200258 complement(join(1759203..1759433,1759488..1759673)) 1 NC_012965.1 hypothetical protein 1759673 8200258 PAS_chr3_1237 Pichia pastoris GS115 hypothetical protein XP_002493141.1 1759203 R 644223 CDS PAS_chr3_0904 254572065 8199675 1759816..1760904 1 NC_012965.1 Strand exchange protein, forms a helical filament with DNA that searches for homology 1760904 8199675 PAS_chr3_0904 Pichia pastoris GS115 Strand exchange protein, forms a helical filament with DNA that searches for homology XP_002493142.1 1759816 D 644223 CDS PAS_chr3_0905 254572067 8200259 complement(1760947..1763445) 1 NC_012965.1 Putative transcription factor, has homolog in Kluyveromyces lactis 1763445 8200259 PAS_chr3_0905 Pichia pastoris GS115 Putative transcription factor, has homolog in Kluyveromyces lactis XP_002493143.1 1760947 R 644223 CDS PAS_chr3_0906 254572069 8200260 complement(1763644..1764375) 1 NC_012965.1 Mitochondrial peroxiredoxin (1-Cys Prx) with thioredoxin peroxidase activity 1764375 8200260 PAS_chr3_0906 Pichia pastoris GS115 Mitochondrial peroxiredoxin (1-Cys Prx) with thioredoxin peroxidase activity XP_002493144.1 1763644 R 644223 CDS PAS_chr3_0907 254572071 8200261 1764746..1765006 1 NC_012965.1 hypothetical protein 1765006 8200261 PAS_chr3_0907 Pichia pastoris GS115 hypothetical protein XP_002493145.1 1764746 D 644223 CDS PAS_chr3_0908 254572073 8200262 1765412..1767451 1 NC_012965.1 Mitochondrial protein, forms a heterodimer complex with Mss1p 1767451 8200262 PAS_chr3_0908 Pichia pastoris GS115 Mitochondrial protein, forms a heterodimer complex with Mss1p XP_002493146.1 1765412 D 644223 CDS PAS_chr3_0909 254572075 8200263 complement(1767471..1768634) 1 NC_012965.1 hypothetical protein 1768634 8200263 PAS_chr3_0909 Pichia pastoris GS115 hypothetical protein XP_002493147.1 1767471 R 644223 CDS PAS_chr3_0910 254572077 8200264 1768785..1769570 1 NC_012965.1 Putative protein of unknown function that may participate in DNA replication 1769570 8200264 PAS_chr3_0910 Pichia pastoris GS115 Putative protein of unknown function that may participate in DNA replication XP_002493148.1 1768785 D 644223 CDS PAS_chr3_0911 254572079 8200265 complement(1769709..1769933) 1 NC_012965.1 hypothetical protein 1769933 8200265 PAS_chr3_0911 Pichia pastoris GS115 hypothetical protein XP_002493149.1 1769709 R 644223 CDS PAS_chr3_0912 254572081 8200266 1770194..1771261 1 NC_012965.1 Mitochondrial ribosomal protein of the large subunit 1771261 8200266 PAS_chr3_0912 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002493150.1 1770194 D 644223 CDS PAS_chr3_0913 254572083 8200267 complement(1771367..1775287) 1 NC_012965.1 Component of the mitotic spindle that binds to interpolar microtubules 1775287 8200267 PAS_chr3_0913 Pichia pastoris GS115 Component of the mitotic spindle that binds to interpolar microtubules XP_002493151.1 1771367 R 644223 CDS PAS_chr3_0914 254572085 8200268 complement(1775567..1776415) 1 NC_012965.1 Acetyltransferase required for the establishment of sister chromatid cohesion 1776415 8200268 PAS_chr3_0914 Pichia pastoris GS115 Acetyltransferase required for the establishment of sister chromatid cohesion XP_002493152.1 1775567 R 644223 CDS PAS_chr3_0915 254572087 8200269 1776509..1777411 1 NC_012965.1 Quinolinate phosphoribosyl transferase 1777411 8200269 PAS_chr3_0915 Pichia pastoris GS115 Quinolinate phosphoribosyl transferase XP_002493153.1 1776509 D 644223 CDS PAS_chr3_0916 254572089 8200270 complement(1777444..1778433) 1 NC_012965.1 Golgi GDP-mannose transporter 1778433 8200270 PAS_chr3_0916 Pichia pastoris GS115 Golgi GDP-mannose transporter XP_002493154.1 1777444 R 644223 CDS PAS_chr3_0917 254572091 8200271 complement(1778705..1779670) 1 NC_012965.1 hypothetical protein 1779670 8200271 PAS_chr3_0917 Pichia pastoris GS115 hypothetical protein XP_002493155.1 1778705 R 644223 CDS PAS_chr3_0918 254572093 8200272 1780377..1782182 1 NC_012965.1 ATPase of the ATP-binding cassette (ABC) family involved in 40S and 60S ribosome biogenesis 1782182 8200272 PAS_chr3_0918 Pichia pastoris GS115 ATPase of the ATP-binding cassette (ABC) family involved in 40S and 60S ribosome biogenesis XP_002493156.1 1780377 D 644223 CDS PAS_chr3_1238 254572095 8200273 1782387..1783487 1 NC_012965.1 hypothetical protein 1783487 8200273 PAS_chr3_1238 Pichia pastoris GS115 hypothetical protein XP_002493157.1 1782387 D 644223 CDS PAS_chr3_0919 254572097 8199676 complement(1783600..1785126) 1 NC_012965.1 hypothetical protein 1785126 8199676 PAS_chr3_0919 Pichia pastoris GS115 hypothetical protein XP_002493158.1 1783600 R 644223 CDS PAS_chr3_0922 254572099 8200274 join(1794243..1794896,1795705..1796895) 1 NC_012965.1 Polyamine oxidase, converts spermine to spermidine 1796895 8200274 PAS_chr3_0922 Pichia pastoris GS115 Polyamine oxidase, converts spermine to spermidine XP_002493159.1 1794243 D 644223 CDS PAS_chr3_0923 254572101 8200275 complement(1796968..1797891) 1 NC_012965.1 Copper-sensing transcription factor 1797891 8200275 PAS_chr3_0923 Pichia pastoris GS115 Copper-sensing transcription factor XP_002493160.1 1796968 R 644223 CDS PAS_chr3_0924 254572103 8200276 1798113..1798616 1 NC_012965.1 Ubiquitin conjugating enzyme, involved in the ER-associated protein degradation pathway 1798616 8200276 PAS_chr3_0924 Pichia pastoris GS115 Ubiquitin conjugating enzyme, involved in the ER-associated protein degradation pathway XP_002493161.1 1798113 D 644223 CDS PAS_chr3_0925 254572105 8200277 join(1798876..1798912,1798980..1802830) 1 NC_012965.1 eIF3 component of unknown function 1802830 8200277 PAS_chr3_0925 Pichia pastoris GS115 eIF3 component of unknown function XP_002493162.1 1798876 D 644223 CDS PAS_chr3_0926 254572107 8200278 complement(1802884..1805463) 1 NC_012965.1 hypothetical protein 1805463 8200278 PAS_chr3_0926 Pichia pastoris GS115 hypothetical protein XP_002493163.1 1802884 R 644223 CDS PAS_chr3_1239 254572109 8200279 1805721..1806722 1 NC_012965.1 hypothetical protein 1806722 8200279 PAS_chr3_1239 Pichia pastoris GS115 hypothetical protein XP_002493164.1 1805721 D 644223 CDS PAS_chr3_0927 254572111 8199677 1806938..1807435 1 NC_012965.1 Subunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P, which cleaves tRNA precursor 1807435 8199677 PAS_chr3_0927 Pichia pastoris GS115 Subunit of both RNase MRP, which cleaves pre-rRNA, and nuclear RNase P, which cleaves tRNA precursor XP_002493165.1 1806938 D 644223 CDS PAS_chr3_1240 254572113 8200280 complement(1807489..1808859) 1 NC_012965.1 hypothetical protein 1808859 8200280 PAS_chr3_1240 Pichia pastoris GS115 hypothetical protein XP_002493166.1 1807489 R 644223 CDS PAS_chr3_0928 254572115 8199678 complement(1808956..1810758) 1 NC_012965.1 Mitochondrial ATP-binding protein, possibly a mitochondrial chaperone with non-proteolytic function 1810758 8199678 PAS_chr3_0928 Pichia pastoris GS115 Mitochondrial ATP-binding protein, possibly a mitochondrial chaperone with non-proteolytic function XP_002493167.1 1808956 R 644223 CDS PAS_chr3_0929 254572117 8200281 1810921..1815273 1 NC_012965.1 Protein required for beta-1,6 glucan biosynthesis 1815273 8200281 PAS_chr3_0929 Pichia pastoris GS115 Protein required for beta-1,6 glucan biosynthesis XP_002493168.1 1810921 D 644223 CDS PAS_chr3_0930 254572119 8200282 complement(1815765..1818446) 1 NC_012965.1 Membrane protein 1818446 8200282 PAS_chr3_0930 Pichia pastoris GS115 Membrane protein XP_002493169.1 1815765 R 644223 CDS PAS_chr3_0931 254572121 8200283 complement(1819137..1820768) 1 NC_012965.1 Phosphoinositide binding protein required for vesicle formation in autophagy 1820768 8200283 PAS_chr3_0931 Pichia pastoris GS115 Phosphoinositide binding protein required for vesicle formation in autophagy XP_002493170.1 1819137 R 644223 CDS PAS_chr3_0932 254572123 8200284 1821897..1822994 1 NC_012965.1 NAD(+)-dependent formate dehydrogenase, may protect cells from exogenous formate 1822994 8200284 PAS_chr3_0932 Pichia pastoris GS115 NAD(+)-dependent formate dehydrogenase, may protect cells from exogenous formate XP_002493171.1 1821897 D 644223 CDS PAS_chr3_1241 254572125 8200285 complement(join(1823199..1824014,1824077..1824091)) 1 NC_012965.1 hypothetical protein 1824091 8200285 PAS_chr3_1241 Pichia pastoris GS115 hypothetical protein XP_002493172.1 1823199 R 644223 CDS PAS_chr3_0933 254572127 8199679 complement(1824332..1826722) 1 NC_012965.1 Ubiquitin-specific protease that specifically disassembles unanchored ubiquitin chains 1826722 8199679 PAS_chr3_0933 Pichia pastoris GS115 Ubiquitin-specific protease that specifically disassembles unanchored ubiquitin chains XP_002493173.1 1824332 R 644223 CDS PAS_chr3_0934 254572129 8200286 complement(1827001..1828689) 1 NC_012965.1 hypothetical protein 1828689 8200286 PAS_chr3_0934 Pichia pastoris GS115 hypothetical protein XP_002493174.1 1827001 R 644223 CDS PAS_chr3_0935 254572131 8200287 complement(1828839..1831802) 1 NC_012965.1 Putative ATP-dependent permease of the ABC transporter family of proteins 1831802 8200287 PAS_chr3_0935 Pichia pastoris GS115 Putative ATP-dependent permease of the ABC transporter family of proteins XP_002493175.1 1828839 R 644223 CDS PAS_chr3_0936 254572133 8200288 complement(1831956..1833059) 1 NC_012965.1 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase 1833059 8200288 PAS_chr3_0936 Pichia pastoris GS115 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase XP_002493176.1 1831956 R 644223 CDS PAS_chr3_0937 254572135 8200289 complement(1833532..1835046) 1 NC_012965.1 3-hydroxyisobutyryl-CoA hydrolase, member of a family of enoyl-CoA hydratase/isomerases 1835046 8200289 PAS_chr3_0937 Pichia pastoris GS115 3-hydroxyisobutyryl-CoA hydrolase, member of a family of enoyl-CoA hydratase/isomerases XP_002493177.1 1833532 R 644223 CDS PAS_chr3_0939 254572137 8200290 1835615..1836553 1 NC_012965.1 delta 4-(E)-sphingolipid desaturase 1836553 8200290 PAS_chr3_0939 Pichia pastoris GS115 delta 4-(E)-sphingolipid desaturase XP_002493178.1 1835615 D 644223 CDS PAS_chr3_0940 254572139 8200291 complement(1837339..1839255) 1 NC_012965.1 Ser-Thr protein kinase, member (with Ark1p and Prk1p) of the Ark kinase family 1839255 8200291 PAS_chr3_0940 Pichia pastoris GS115 Ser-Thr protein kinase, member (with Ark1p and Prk1p) of the Ark kinase family XP_002493179.1 1837339 R 644223 CDS PAS_chr3_0941 254572141 8200292 complement(1839454..1841055) 1 NC_012965.1 Subunit of the origin recognition complex, which directs DNA replication 1841055 8200292 PAS_chr3_0941 Pichia pastoris GS115 Subunit of the origin recognition complex, which directs DNA replication XP_002493180.1 1839454 R 644223 CDS PAS_chr3_0942 254572143 8200293 join(1841221..1841259,1841310..1841606) 1 NC_012965.1 RNA polymerase III subunit C11 1841606 8200293 PAS_chr3_0942 Pichia pastoris GS115 RNA polymerase III subunit C11 XP_002493181.1 1841221 D 644223 CDS PAS_chr3_0943 254572145 8200294 complement(1841748..1842725) 1 NC_012965.1 Coproporphyrinogen III oxidase, an oxygen requiring enzyme 1842725 8200294 PAS_chr3_0943 Pichia pastoris GS115 Coproporphyrinogen III oxidase, an oxygen requiring enzyme XP_002493182.1 1841748 R 644223 CDS PAS_chr3_1242 254572147 8200295 complement(1842936..1843565) 1 NC_012965.1 hypothetical protein 1843565 8200295 PAS_chr3_1242 Pichia pastoris GS115 hypothetical protein XP_002493183.1 1842936 R 644223 CDS PAS_chr3_0944 254572149 8199680 complement(1844617..1845264) 1 NC_012965.1 Component of UDP-GlcNAc transferase 1845264 8199680 PAS_chr3_0944 Pichia pastoris GS115 Component of UDP-GlcNAc transferase XP_002493184.1 1844617 R 644223 CDS PAS_chr3_0945 254572151 8200296 1845382..1845909 1 NC_012965.1 hypothetical protein 1845909 8200296 PAS_chr3_0945 Pichia pastoris GS115 hypothetical protein XP_002493185.1 1845382 D 644223 CDS PAS_chr3_0946 254572153 8200297 complement(1845970..1846701) 1 NC_012965.1 Mitochondrial ribosomal protein of the small subunit 1846701 8200297 PAS_chr3_0946 Pichia pastoris GS115 Mitochondrial ribosomal protein of the small subunit XP_002493186.1 1845970 R 644223 CDS PAS_chr3_0947 254572155 8200298 1846913..1847848 1 NC_012965.1 2'-O-ribose methyltransferase, methylates the 2'-O-ribose of nucleotides 1847848 8200298 PAS_chr3_0947 Pichia pastoris GS115 2'-O-ribose methyltransferase, methylates the 2'-O-ribose of nucleotides XP_002493187.1 1846913 D 644223 CDS PAS_chr3_0948 254572157 8200299 complement(1847883..1848899) 1 NC_012965.1 hypothetical protein 1848899 8200299 PAS_chr3_0948 Pichia pastoris GS115 hypothetical protein XP_002493188.1 1847883 R 644223 CDS PAS_chr3_0949 254572159 8200300 1849095..1850861 1 NC_012965.1 Lysyl-tRNA synthetase 1850861 8200300 PAS_chr3_0949 Pichia pastoris GS115 Lysyl-tRNA synthetase XP_002493189.1 1849095 D 644223 CDS PAS_chr3_0950 254572161 8200301 join(1851096..1851110,1851165..1851962) 1 NC_012965.1 hypothetical protein 1851962 8200301 PAS_chr3_0950 Pichia pastoris GS115 hypothetical protein XP_002493190.1 1851096 D 644223 CDS PAS_chr3_0951 254572163 8200302 join(1852579..1852581,1852693..1853436) 1 NC_012965.1 Triose phosphate isomerase, abundant glycolytic enzyme 1853436 8200302 PAS_chr3_0951 Pichia pastoris GS115 Triose phosphate isomerase, abundant glycolytic enzyme XP_002493191.1 1852579 D 644223 CDS PAS_chr3_0952 254572165 8200303 complement(1853522..1854202) 1 NC_012965.1 hypothetical protein 1854202 8200303 PAS_chr3_0952 Pichia pastoris GS115 hypothetical protein XP_002493192.1 1853522 R 644223 CDS PAS_chr3_0953 254572167 8199700 complement(1854330..1857302) 1 NC_012965.1 Putative metalloprotease 1857302 8199700 PAS_chr3_0953 Pichia pastoris GS115 Putative metalloprotease XP_002493193.1 1854330 R 644223 CDS PAS_chr3_0954 254572169 8199701 1857537..1858622 1 NC_012965.1 Uroporphyrinogen decarboxylase 1858622 8199701 PAS_chr3_0954 Pichia pastoris GS115 Uroporphyrinogen decarboxylase XP_002493194.1 1857537 D 644223 CDS PAS_chr3_0955 254572171 8199702 complement(1858675..1859703) 1 NC_012965.1 hypothetical protein 1859703 8199702 PAS_chr3_0955 Pichia pastoris GS115 hypothetical protein XP_002493195.1 1858675 R 644223 CDS PAS_chr3_0956 254572173 8199703 1859901..1860797 1 NC_012965.1 Protein involved in rRNA processing 1860797 8199703 PAS_chr3_0956 Pichia pastoris GS115 Protein involved in rRNA processing XP_002493196.1 1859901 D 644223 CDS PAS_chr3_0957 254572175 8199704 complement(1860871..1862418) 1 NC_012965.1 Lanosterol 14-alpha-demethylase, catalyzes the C-14 demethylation of lanosterol 1862418 8199704 PAS_chr3_0957 Pichia pastoris GS115 Lanosterol 14-alpha-demethylase, catalyzes the C-14 demethylation of lanosterol XP_002493197.1 1860871 R 644223 CDS PAS_chr3_0958 254572177 8199705 complement(1862945..1863370) 1 NC_012965.1 hypothetical protein 1863370 8199705 PAS_chr3_0958 Pichia pastoris GS115 hypothetical protein XP_002493198.1 1862945 R 644223 CDS PAS_chr3_0959 254572179 8199706 complement(1863527..1863925) 1 NC_012965.1 Mitochondrial ribosomal protein of the large subunit 1863925 8199706 PAS_chr3_0959 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002493199.1 1863527 R 644223 CDS PAS_chr3_0960 254572181 8199707 1864267..1865061 1 NC_012965.1 Glycoprotein involved in cell wall beta-glucan assembly 1865061 8199707 PAS_chr3_0960 Pichia pastoris GS115 Glycoprotein involved in cell wall beta-glucan assembly XP_002493200.1 1864267 D 644223 CDS PAS_chr3_0961 254572183 8199708 complement(1865176..1865487) 1 NC_012965.1 hypothetical protein 1865487 8199708 PAS_chr3_0961 Pichia pastoris GS115 hypothetical protein XP_002493201.1 1865176 R 644223 CDS PAS_chr3_0962 254572185 8199709 1865691..1867151 1 NC_012965.1 Bifunctional enzyme exhibiting indole-3-glycerol-phosphate synthase and anthranilate synthase activi 1867151 8199709 PAS_chr3_0962 Pichia pastoris GS115 Bifunctional enzyme exhibiting indole-3-glycerol-phosphate synthase and anthranilate synthase activi XP_002493202.1 1865691 D 644223 CDS PAS_chr3_0963 254572187 8199710 1867416..1868411 1 NC_012965.1 hypothetical protein 1868411 8199710 PAS_chr3_0963 Pichia pastoris GS115 hypothetical protein XP_002493203.1 1867416 D 644223 CDS PAS_chr3_0964 254572189 8199711 complement(1868429..1869766) 1 NC_012965.1 cAMP-dependent protein kinase catalytic subunit 1869766 8199711 PAS_chr3_0964 Pichia pastoris GS115 cAMP-dependent protein kinase catalytic subunit XP_002493204.1 1868429 R 644223 CDS PAS_chr3_1243 254572191 8199712 1869947..1870870 1 NC_012965.1 hypothetical protein 1870870 8199712 PAS_chr3_1243 Pichia pastoris GS115 hypothetical protein XP_002493205.1 1869947 D 644223 CDS PAS_chr3_0965 254572193 8199681 1871066..1872736 1 NC_012965.1 Glutamate decarboxylase, converts glutamate into gamma-aminobutyric acid (GABA) 1872736 8199681 PAS_chr3_0965 Pichia pastoris GS115 Glutamate decarboxylase, converts glutamate into gamma-aminobutyric acid (GABA) XP_002493206.1 1871066 D 644223 CDS PAS_chr3_0966 254572195 8199713 complement(1872768..1873967) 1 NC_012965.1 Vacuolar membrane zinc transporter 1873967 8199713 PAS_chr3_0966 Pichia pastoris GS115 Vacuolar membrane zinc transporter XP_002493207.1 1872768 R 644223 CDS PAS_chr3_0967 254572197 8199714 complement(1874632..1875831) 1 NC_012965.1 Component of the septin ring of the mother-bud neck that is required for cytokinesis 1875831 8199714 PAS_chr3_0967 Pichia pastoris GS115 Component of the septin ring of the mother-bud neck that is required for cytokinesis XP_002493208.1 1874632 R 644223 CDS PAS_chr3_1244 254572199 8199715 complement(1876045..1877277) 1 NC_012965.1 hypothetical protein 1877277 8199715 PAS_chr3_1244 Pichia pastoris GS115 hypothetical protein XP_002493209.1 1876045 R 644223 CDS PAS_chr3_1245 254572201 8199682 complement(1877490..1878584) 1 NC_012965.1 hypothetical protein 1878584 8199682 PAS_chr3_1245 Pichia pastoris GS115 hypothetical protein XP_002493210.1 1877490 R 644223 CDS PAS_chr3_0968 254572203 8199683 complement(1878811..1879638) 1 NC_012965.1 Transcription factor involved in cell-type-specific transcription and pheromone response 1879638 8199683 PAS_chr3_0968 Pichia pastoris GS115 Transcription factor involved in cell-type-specific transcription and pheromone response XP_002493211.1 1878811 R 644223 CDS PAS_chr3_0969 254572205 8199716 1881100..1883550 1 NC_012965.1 tRNase Z, involved in RNA processing 1883550 8199716 PAS_chr3_0969 Pichia pastoris GS115 tRNase Z, involved in RNA processing XP_002493212.1 1881100 D 644223 CDS PAS_chr3_0970 254572207 8199717 complement(1883631..1884164) 1 NC_012965.1 hypothetical protein 1884164 8199717 PAS_chr3_0970 Pichia pastoris GS115 hypothetical protein XP_002493213.1 1883631 R 644223 CDS PAS_chr3_0971 254572209 8199718 complement(1885050..1886456) 1 NC_012965.1 Divalent metal ion transporter with a broad specificity for di-valent and tri-valent metals 1886456 8199718 PAS_chr3_0971 Pichia pastoris GS115 Divalent metal ion transporter with a broad specificity for di-valent and tri-valent metals XP_002493214.1 1885050 R 644223 CDS PAS_chr3_0972 254572211 8199719 1886742..1887350 1 NC_012965.1 Cytoplasmic mRNA cap binding protein 1887350 8199719 PAS_chr3_0972 Pichia pastoris GS115 Cytoplasmic mRNA cap binding protein XP_002493215.1 1886742 D 644223 CDS PAS_chr3_0973 254572213 8199720 complement(1887437..1888183) 1 NC_012965.1 hypothetical protein 1888183 8199720 PAS_chr3_0973 Pichia pastoris GS115 hypothetical protein XP_002493216.1 1887437 R 644223 CDS PAS_chr3_0974 254572215 8199721 complement(1888393..1889469) 1 NC_012965.1 ADP-ribosylation factor GTPase activating protein (ARF GAP), involved in ER-Golgi transport 1889469 8199721 PAS_chr3_0974 Pichia pastoris GS115 ADP-ribosylation factor GTPase activating protein (ARF GAP), involved in ER-Golgi transport XP_002493217.1 1888393 R 644223 CDS PAS_chr3_0975 254572217 8199722 complement(1889695..1890531) 1 NC_012965.1 Peroxisomal 2,4-dienoyl-CoA reductase, auxiliary enzyme of fatty acid beta-oxidation 1890531 8199722 PAS_chr3_0975 Pichia pastoris GS115 Peroxisomal 2,4-dienoyl-CoA reductase, auxiliary enzyme of fatty acid beta-oxidation XP_002493218.1 1889695 R 644223 CDS PAS_chr3_0976 254572219 8199723 complement(1890865..1891563) 1 NC_012965.1 Putative protein of unknown function 1891563 8199723 PAS_chr3_0976 Pichia pastoris GS115 Putative protein of unknown function XP_002493219.1 1890865 R 644223 CDS PAS_chr3_0977 254572221 8199724 1891902..1893521 1 NC_012965.1 One of five related septins (Cdc3p, Cdc10p, Cdc11p, Cdc12p, Shs1p) 1893521 8199724 PAS_chr3_0977 Pichia pastoris GS115 One of five related septins (Cdc3p, Cdc10p, Cdc11p, Cdc12p, Shs1p) XP_002493220.1 1891902 D 644223 CDS PAS_chr3_0978 254572223 8199725 complement(1893587..1895080) 1 NC_012965.1 RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci 1895080 8199725 PAS_chr3_0978 Pichia pastoris GS115 RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci XP_002493221.1 1893587 R 644223 CDS PAS_chr3_0979 254572225 8199726 1895842..1896522 1 NC_012965.1 hypothetical protein 1896522 8199726 PAS_chr3_0979 Pichia pastoris GS115 hypothetical protein XP_002493222.1 1895842 D 644223 CDS PAS_chr3_0980 254572227 8199727 complement(1896524..1897558) 1 NC_012965.1 Putative serine/threonine protein kinase with unknown cellular role 1897558 8199727 PAS_chr3_0980 Pichia pastoris GS115 Putative serine/threonine protein kinase with unknown cellular role XP_002493223.1 1896524 R 644223 CDS PAS_chr3_0982 254572229 8199728 1898423..1900414 1 NC_012965.1 Ferric reductase and cupric reductase 1900414 8199728 PAS_chr3_0982 Pichia pastoris GS115 Ferric reductase and cupric reductase XP_002493224.1 1898423 D 644223 CDS PAS_chr3_0983 254572231 8199729 complement(1900793..1902319) 1 NC_012965.1 Actin-associated protein, subunit of a complex (Rvs161p-Rvs167p) 1902319 8199729 PAS_chr3_0983 Pichia pastoris GS115 Actin-associated protein, subunit of a complex (Rvs161p-Rvs167p) XP_002493225.1 1900793 R 644223 CDS PAS_chr3_0984 254572233 8199730 complement(1902853..1903761) 1 NC_012965.1 Protein of unknown function, deletion causes hypersensitivity to the K1 killer toxin 1903761 8199730 PAS_chr3_0984 Pichia pastoris GS115 Protein of unknown function, deletion causes hypersensitivity to the K1 killer toxin XP_002493226.1 1902853 R 644223 CDS PAS_chr3_0985 254572235 8199731 1904057..1905007 1 NC_012965.1 Putative protein of unknown function with similarity to acyl-carrier-protein reductases 1905007 8199731 PAS_chr3_0985 Pichia pastoris GS115 Putative protein of unknown function with similarity to acyl-carrier-protein reductases XP_002493227.1 1904057 D 644223 CDS PAS_chr3_0986 254572237 8199732 1905106..1906050 1 NC_012965.1 Serine hydrolase with sequence similarity to monoglyceride lipase (MGL) 1906050 8199732 PAS_chr3_0986 Pichia pastoris GS115 Serine hydrolase with sequence similarity to monoglyceride lipase (MGL) XP_002493228.1 1905106 D 644223 CDS PAS_chr3_0987 254572239 8199733 1907235..1908728 1 NC_012965.1 Mitochondrial aldehyde dehydrogenase 1908728 8199733 PAS_chr3_0987 Pichia pastoris GS115 Mitochondrial aldehyde dehydrogenase XP_002493229.1 1907235 D 644223 CDS PAS_chr3_0989 254572241 8199734 complement(1911234..1912226) 1 NC_012965.1 t-SNARE required for ER membrane fusion and vesicular traffic 1912226 8199734 PAS_chr3_0989 Pichia pastoris GS115 t-SNARE required for ER membrane fusion and vesicular traffic XP_002493230.1 1911234 R 644223 CDS PAS_chr3_0990 254572243 8199735 1912601..1914583 1 NC_012965.1 Nexin-1 homolog required for localizing membrane proteins 1914583 8199735 PAS_chr3_0990 Pichia pastoris GS115 Nexin-1 homolog required for localizing membrane proteins XP_002493231.1 1912601 D 644223 CDS PAS_chr3_0991 254572245 8199736 complement(1914706..1915665) 1 NC_012965.1 Essential protein involved in the processing of pre-rRNA and the assembly of 60S ribosomal subunit 1915665 8199736 PAS_chr3_0991 Pichia pastoris GS115 Essential protein involved in the processing of pre-rRNA and the assembly of 60S ribosomal subunit XP_002493232.1 1914706 R 644223 CDS PAS_chr3_0992 254572247 8199737 1915868..1919407 1 NC_012965.1 Protein involved in pre-mRNA splicing 1919407 8199737 PAS_chr3_0992 Pichia pastoris GS115 Protein involved in pre-mRNA splicing XP_002493233.1 1915868 D 644223 CDS PAS_chr3_0993 254572249 8199738 1919513..1922962 1 NC_012965.1 Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC) 1922962 8199738 PAS_chr3_0993 Pichia pastoris GS115 Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC) XP_002493234.1 1919513 D 644223 CDS PAS_chr3_0994 254572251 8199739 complement(1923075..1923446) 1 NC_012965.1 hypothetical protein 1923446 8199739 PAS_chr3_0994 Pichia pastoris GS115 hypothetical protein XP_002493235.1 1923075 R 644223 CDS PAS_chr3_0995 254572253 8199740 1923670..1924746 1 NC_012965.1 hypothetical protein 1924746 8199740 PAS_chr3_0995 Pichia pastoris GS115 hypothetical protein XP_002493236.1 1923670 D 644223 CDS PAS_chr3_0996 254572255 8199741 complement(1924811..1925707) 1 NC_012965.1 Thymidylate synthase, required for de novo biosynthesis of pyrimidine deoxyribonucleotides 1925707 8199741 PAS_chr3_0996 Pichia pastoris GS115 Thymidylate synthase, required for de novo biosynthesis of pyrimidine deoxyribonucleotides XP_002493237.1 1924811 R 644223 CDS PAS_chr3_0997 254572257 8199742 join(1925991..1926035,1926423..1927244) 1 NC_012965.1 Cytochrome c1, component of the mitochondrial respiratory chain 1927244 8199742 PAS_chr3_0997 Pichia pastoris GS115 Cytochrome c1, component of the mitochondrial respiratory chain XP_002493238.1 1925991 D 644223 CDS PAS_chr3_0998 254572259 8199743 1927667..1928359 1 NC_012965.1 Subunit of the NuA4 histone acetyltransferase complex that acetylates histone H4 and H2A 1928359 8199743 PAS_chr3_0998 Pichia pastoris GS115 Subunit of the NuA4 histone acetyltransferase complex that acetylates histone H4 and H2A XP_002493239.1 1927667 D 644223 CDS PAS_chr3_0999 254572261 8199744 complement(1928418..1930154) 1 NC_012965.1 Glucosyl transferase, involved in N-linked glycosylation 1930154 8199744 PAS_chr3_0999 Pichia pastoris GS115 Glucosyl transferase, involved in N-linked glycosylation XP_002493240.1 1928418 R 644223 CDS PAS_chr3_1000 254572263 8199745 1930357..1930875 1 NC_012965.1 hypothetical protein 1930875 8199745 PAS_chr3_1000 Pichia pastoris GS115 hypothetical protein XP_002493241.1 1930357 D 644223 CDS PAS_chr3_1001 254572265 8199746 complement(1931351..1933138) 1 NC_012965.1 General repressor of transcription, forms complex with Cyc8p 1933138 8199746 PAS_chr3_1001 Pichia pastoris GS115 General repressor of transcription, forms complex with Cyc8p XP_002493242.1 1931351 R 644223 CDS PAS_chr3_1002 254572267 8199747 1933734..1934483 1 NC_012965.1 Putative nicotinamide N-methyltransferase 1934483 8199747 PAS_chr3_1002 Pichia pastoris GS115 Putative nicotinamide N-methyltransferase XP_002493243.1 1933734 D 644223 CDS PAS_chr3_1004 254572269 8199748 1937396..1938271 1 NC_012965.1 hypothetical protein 1938271 8199748 PAS_chr3_1004 Pichia pastoris GS115 hypothetical protein XP_002493244.1 1937396 D 644223 CDS PAS_chr3_1005 254572271 8199749 1938451..1940160 1 NC_012965.1 hypothetical protein 1940160 8199749 PAS_chr3_1005 Pichia pastoris GS115 hypothetical protein XP_002493245.1 1938451 D 644223 CDS PAS_chr3_1006 254572273 8199750 complement(1940193..1941335) 1 NC_012965.1 Essential, conserved, cytoplasmic ATPase 1941335 8199750 PAS_chr3_1006 Pichia pastoris GS115 Essential, conserved, cytoplasmic ATPase XP_002493246.1 1940193 R 644223 CDS PAS_chr3_1007 254572275 8199751 1941481..1942491 1 NC_012965.1 Geranylgeranyl diphosphate synthase, increases the intracellular pool of geranylgeranyl diphosphate 1942491 8199751 PAS_chr3_1007 Pichia pastoris GS115 Geranylgeranyl diphosphate synthase, increases the intracellular pool of geranylgeranyl diphosphate XP_002493247.1 1941481 D 644223 CDS PAS_chr3_1008 254572277 8199752 complement(1942548..1943408) 1 NC_012965.1 hypothetical protein 1943408 8199752 PAS_chr3_1008 Pichia pastoris GS115 hypothetical protein XP_002493248.1 1942548 R 644223 CDS PAS_chr3_1009 254572279 8199753 1943642..1944991 1 NC_012965.1 hypothetical protein 1944991 8199753 PAS_chr3_1009 Pichia pastoris GS115 hypothetical protein XP_002493249.1 1943642 D 644223 CDS PAS_chr3_1010 254572281 8199754 join(1945105..1945166,1945539..1945628,1945680..1946931) 1 NC_012965.1 Putative protein of unknown function 1946931 8199754 PAS_chr3_1010 Pichia pastoris GS115 Putative protein of unknown function XP_002493250.1 1945105 D 644223 CDS PAS_chr3_1011 254572283 8199755 complement(1946983..1948371) 1 NC_012965.1 Cytosolic and mitochondrial glutathione oxidoreductase 1948371 8199755 PAS_chr3_1011 Pichia pastoris GS115 Cytosolic and mitochondrial glutathione oxidoreductase XP_002493251.1 1946983 R 644223 CDS PAS_chr3_1012 254572285 8199756 1948761..1949684 1 NC_012965.1 Ketopantoate hydroxymethyltransferase, required for pantothenic acid biosynthesis 1949684 8199756 PAS_chr3_1012 Pichia pastoris GS115 Ketopantoate hydroxymethyltransferase, required for pantothenic acid biosynthesis XP_002493252.1 1948761 D 644223 CDS PAS_chr3_1013 254572287 8199757 complement(1949724..1950932) 1 NC_012965.1 Putative protein of unknown function 1950932 8199757 PAS_chr3_1013 Pichia pastoris GS115 Putative protein of unknown function XP_002493253.1 1949724 R 644223 CDS PAS_chr3_1014 254572289 8199758 complement(1951199..1952050) 1 NC_012965.1 Essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p) 1952050 8199758 PAS_chr3_1014 Pichia pastoris GS115 Essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p) XP_002493254.1 1951199 R 644223 CDS PAS_chr3_1015 254572291 8199759 join(1952478..1952555,1952613..1952840) 1 NC_012965.1 Protein required for growth of cells lacking the mitochondrial genome 1952840 8199759 PAS_chr3_1015 Pichia pastoris GS115 Protein required for growth of cells lacking the mitochondrial genome XP_002493255.1 1952478 D 644223 CDS PAS_chr3_1016 254572293 8199760 1952992..1954212 1 NC_012965.1 Phosphoinositide binding protein 1954212 8199760 PAS_chr3_1016 Pichia pastoris GS115 Phosphoinositide binding protein XP_002493256.1 1952992 D 644223 CDS PAS_chr3_1017 254572295 8199761 1954396..1956201 1 NC_012965.1 Putative protein of unknown function 1956201 8199761 PAS_chr3_1017 Pichia pastoris GS115 Putative protein of unknown function XP_002493257.1 1954396 D 644223 CDS PAS_chr3_1018 254572297 8199762 complement(1956216..1958258) 1 NC_012965.1 Resident protein of the ER membrane that plays a central role in ER-associated protein degradation 1958258 8199762 PAS_chr3_1018 Pichia pastoris GS115 Resident protein of the ER membrane that plays a central role in ER-associated protein degradation XP_002493258.1 1956216 R 644223 CDS PAS_chr3_1019 254572299 8199763 1958409..1959371 1 NC_012965.1 hypothetical protein 1959371 8199763 PAS_chr3_1019 Pichia pastoris GS115 hypothetical protein XP_002493259.1 1958409 D 644223 CDS PAS_chr3_1246 254572301 8199764 1959465..1959776 1 NC_012965.1 hypothetical protein 1959776 8199764 PAS_chr3_1246 Pichia pastoris GS115 hypothetical protein XP_002493260.1 1959465 D 644223 CDS PAS_chr3_1020 254572303 8199684 complement(1959801..1960802) 1 NC_012965.1 hypothetical protein 1960802 8199684 PAS_chr3_1020 Pichia pastoris GS115 hypothetical protein XP_002493261.1 1959801 R 644223 CDS PAS_chr3_1021 254572305 8199765 complement(1961044..1962816) 1 NC_012965.1 D-lactate dehydrogenase, oxidizes D-lactate to pyruvate, transcription is heme-dependent 1962816 8199765 PAS_chr3_1021 Pichia pastoris GS115 D-lactate dehydrogenase, oxidizes D-lactate to pyruvate, transcription is heme-dependent XP_002493262.1 1961044 R 644223 CDS PAS_chr3_1022 254572307 8199766 complement(1963587..1964357) 1 NC_012965.1 Dual function protein 1964357 8199766 PAS_chr3_1022 Pichia pastoris GS115 Dual function protein XP_002493263.1 1963587 R 644223 CDS PAS_chr3_1023 254572309 8199767 1964693..1965139 1 NC_012965.1 hypothetical protein 1965139 8199767 PAS_chr3_1023 Pichia pastoris GS115 hypothetical protein XP_002493264.1 1964693 D 644223 CDS PAS_chr3_1024 254572311 8199768 complement(1965276..1971692) 1 NC_012965.1 NAD(+)-dependent glutamate synthase (GOGAT) 1971692 8199768 PAS_chr3_1024 Pichia pastoris GS115 NAD(+)-dependent glutamate synthase (GOGAT) XP_002493265.1 1965276 R 644223 CDS PAS_chr3_1247 254572313 8199769 complement(1972100..1973857) 1 NC_012965.1 hypothetical protein 1973857 8199769 PAS_chr3_1247 Pichia pastoris GS115 hypothetical protein XP_002493266.1 1972100 R 644223 CDS PAS_chr3_1025 254572315 8199685 1974203..1975585 1 NC_012965.1 N-myristoyl transferase 1975585 8199685 PAS_chr3_1025 Pichia pastoris GS115 N-myristoyl transferase XP_002493267.1 1974203 D 644223 CDS PAS_chr3_1026 254572317 8199770 complement(1975612..1978194) 1 NC_012965.1 Putative protein of unknown function, may be involved in detoxification 1978194 8199770 PAS_chr3_1026 Pichia pastoris GS115 Putative protein of unknown function, may be involved in detoxification XP_002493268.1 1975612 R 644223 CDS PAS_chr3_1027 254572319 8199771 complement(1978343..1980268) 1 NC_012965.1 Protein of unknown function, rich in asparagine residues 1980268 8199771 PAS_chr3_1027 Pichia pastoris GS115 Protein of unknown function, rich in asparagine residues XP_002493269.1 1978343 R 644223 CDS PAS_chr3_1028 254572321 8199772 complement(join(1980650..1981771,1981886..1981903)) 1 NC_012965.1 S-(hydroxymethyl)glutathione dehydrogenase 1981903 8199772 PAS_chr3_1028 Pichia pastoris GS115 S-(hydroxymethyl)glutathione dehydrogenase XP_002493270.1 1980650 R 644223 CDS PAS_chr3_1029 254572323 8199773 1982270..1983703 1 NC_012965.1 hypothetical protein 1983703 8199773 PAS_chr3_1029 Pichia pastoris GS115 hypothetical protein XP_002493271.1 1982270 D 644223 CDS PAS_chr3_1030 254572325 8199774 complement(1983829..1984818) 1 NC_012965.1 hypothetical protein 1984818 8199774 PAS_chr3_1030 Pichia pastoris GS115 hypothetical protein XP_002493272.1 1983829 R 644223 CDS PAS_chr3_1031 254572327 8199775 complement(1985087..1986274) 1 NC_012965.1 Negative regulatory subunit of the protein phosphatase 1 Ppz1p 1986274 8199775 PAS_chr3_1031 Pichia pastoris GS115 Negative regulatory subunit of the protein phosphatase 1 Ppz1p XP_002493273.1 1985087 R 644223 CDS PAS_chr3_1032 254572329 8199776 complement(1987093..1988526) 1 NC_012965.1 Essential nuclear protein involved in proteasome maturation and synthesis of 40S ribosomal subunits 1988526 8199776 PAS_chr3_1032 Pichia pastoris GS115 Essential nuclear protein involved in proteasome maturation and synthesis of 40S ribosomal subunits XP_002493274.1 1987093 R 644223 CDS PAS_chr3_1033 254572331 8200074 1988703..1989830 1 NC_012965.1 hypothetical protein 1989830 8200074 PAS_chr3_1033 Pichia pastoris GS115 hypothetical protein XP_002493275.1 1988703 D 644223 CDS PAS_chr3_1034 254572333 8199996 1990653..1991267 1 NC_012965.1 hypothetical protein 1991267 8199996 PAS_chr3_1034 Pichia pastoris GS115 hypothetical protein XP_002493276.1 1990653 D 644223 CDS PAS_chr3_1035 254572335 8199997 complement(1991316..1994450) 1 NC_012965.1 Component of the Paf1p complex 1994450 8199997 PAS_chr3_1035 Pichia pastoris GS115 Component of the Paf1p complex XP_002493277.1 1991316 R 644223 CDS PAS_chr3_1036 254572337 8199998 1994666..1996423 1 NC_012965.1 Nucleolar protein required for 60S ribosomal subunit biogenesis 1996423 8199998 PAS_chr3_1036 Pichia pastoris GS115 Nucleolar protein required for 60S ribosomal subunit biogenesis XP_002493278.1 1994666 D 644223 CDS PAS_chr3_1037 254572339 8199999 complement(1996477..1996962) 1 NC_012965.1 Lumazine synthase (6,7-dimethyl-8-ribityllumazine synthase, also known as DMRL synthase) 1996962 8199999 PAS_chr3_1037 Pichia pastoris GS115 Lumazine synthase (6,7-dimethyl-8-ribityllumazine synthase, also known as DMRL synthase) XP_002493279.1 1996477 R 644223 CDS PAS_chr3_1038 254572341 8200000 1997286..1998383 1 NC_012965.1 hypothetical protein 1998383 8200000 PAS_chr3_1038 Pichia pastoris GS115 hypothetical protein XP_002493280.1 1997286 D 644223 CDS PAS_chr3_1039 254572343 8200001 1998710..2001013 1 NC_012965.1 Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC) 2001013 8200001 PAS_chr3_1039 Pichia pastoris GS115 Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC) XP_002493281.1 1998710 D 644223 CDS PAS_chr3_1040 254572345 8200002 complement(join(2001200..2001668,2001732..2001745)) 1 NC_012965.1 Proteolipid subunit of the vacuolar H(+)-ATPase V0 sector 2001745 8200002 PAS_chr3_1040 Pichia pastoris GS115 Proteolipid subunit of the vacuolar H(+)-ATPase V0 sector XP_002493282.1 2001200 R 644223 CDS PAS_chr3_1041 254572347 8200003 2002258..2002638 1 NC_012965.1 RNA binding protein 2002638 8200003 PAS_chr3_1041 Pichia pastoris GS115 RNA binding protein XP_002493283.1 2002258 D 644223 CDS PAS_chr3_1042 254572349 8200004 2002922..2005798 1 NC_012965.1 Catalytic component of the exosome, involved in RNA processing and degradation 2005798 8200004 PAS_chr3_1042 Pichia pastoris GS115 Catalytic component of the exosome, involved in RNA processing and degradation XP_002493284.1 2002922 D 644223 CDS PAS_chr3_1043 254572351 8200005 2005955..2007796 1 NC_012965.1 hypothetical protein 2007796 8200005 PAS_chr3_1043 Pichia pastoris GS115 hypothetical protein XP_002493285.1 2005955 D 644223 CDS PAS_chr3_1044 254572353 8200006 2007932..2010184 1 NC_012965.1 Positive regulator of the Gcn2p kinase activity, forms a complex with Gcn1p 2010184 8200006 PAS_chr3_1044 Pichia pastoris GS115 Positive regulator of the Gcn2p kinase activity, forms a complex with Gcn1p XP_002493286.1 2007932 D 644223 CDS PAS_chr3_1045 254572355 8200007 complement(join(2010220..2012470,2012578..2013692)) 1 NC_012965.1 Peroxisome biosynthesis protein PAS1 2013692 8200007 PAS_chr3_1045 Pichia pastoris GS115 Peroxisome biosynthesis protein PAS1 XP_002493287.1 2010220 R 644223 CDS PAS_chr3_1047 254572357 8200008 2013955..2014392 1 NC_012965.1 Small subunit of the clathrin-associated adaptor complex AP-2 2014392 8200008 PAS_chr3_1047 Pichia pastoris GS115 Small subunit of the clathrin-associated adaptor complex AP-2 XP_002493288.1 2013955 D 644223 CDS PAS_chr3_1048 254572359 8200009 complement(join(2014485..2014937,2015024..2015038)) 1 NC_012965.1 Translation initiation factor eIF-5A, promotes formation of the first peptide bond 2015038 8200009 PAS_chr3_1048 Pichia pastoris GS115 Translation initiation factor eIF-5A, promotes formation of the first peptide bond XP_002493289.1 2014485 R 644223 CDS PAS_chr3_1049 254572361 8200010 complement(2015327..2018521) 1 NC_012965.1 hypothetical protein 2018521 8200010 PAS_chr3_1049 Pichia pastoris GS115 hypothetical protein XP_002493290.1 2015327 R 644223 CDS PAS_chr3_1050 254572363 8200011 complement(2019618..2020661) 1 NC_012965.1 hypothetical protein 2020661 8200011 PAS_chr3_1050 Pichia pastoris GS115 hypothetical protein XP_002493291.1 2019618 R 644223 CDS PAS_chr3_1051 254572365 8200012 2020805..2021266 1 NC_012965.1 RNA polymerase III subunit C17 2021266 8200012 PAS_chr3_1051 Pichia pastoris GS115 RNA polymerase III subunit C17 XP_002493292.1 2020805 D 644223 CDS PAS_chr3_1052 254572367 8200013 complement(2021435..2022529) 1 NC_012965.1 Putative protein of unknown function 2022529 8200013 PAS_chr3_1052 Pichia pastoris GS115 Putative protein of unknown function XP_002493293.1 2021435 R 644223 CDS PAS_chr3_1053 254572369 8200014 2022804..2024381 1 NC_012965.1 hypothetical protein 2024381 8200014 PAS_chr3_1053 Pichia pastoris GS115 hypothetical protein XP_002493294.1 2022804 D 644223 CDS PAS_chr3_1054 254572371 8200015 complement(2024450..2025601) 1 NC_012965.1 Translation initiation factor eIF-4B, has RNA annealing activity 2025601 8200015 PAS_chr3_1054 Pichia pastoris GS115 Translation initiation factor eIF-4B, has RNA annealing activity XP_002493295.1 2024450 R 644223 CDS PAS_chr3_1055 254572373 8200016 2026066..2033724 1 NC_012965.1 Putative protein of unknown function 2033724 8200016 PAS_chr3_1055 Pichia pastoris GS115 Putative protein of unknown function XP_002493296.1 2026066 D 644223 CDS PAS_chr3_1056 254572375 8200017 complement(join(2033874..2034295,2034359..2034404)) 1 NC_012965.1 Subunit of the RNA polymerase II mediator complex 2034404 8200017 PAS_chr3_1056 Pichia pastoris GS115 Subunit of the RNA polymerase II mediator complex XP_002493297.1 2033874 R 644223 CDS PAS_chr3_1057 254572377 8200018 2034934..2035332 1 NC_012965.1 Protein component of the large (60S) ribosomal subunit, has similarity to rat L32 ribosomal protein 2035332 8200018 PAS_chr3_1057 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit, has similarity to rat L32 ribosomal protein XP_002493298.1 2034934 D 644223 CDS PAS_chr3_1058 254572379 8200019 complement(2035552..2036421) 1 NC_012965.1 Putative integral membrane protein 2036421 8200019 PAS_chr3_1058 Pichia pastoris GS115 Putative integral membrane protein XP_002493299.1 2035552 R 644223 CDS PAS_chr3_1059 254572381 8200020 complement(2036710..2037423) 1 NC_012965.1 hypothetical protein 2037423 8200020 PAS_chr3_1059 Pichia pastoris GS115 hypothetical protein XP_002493300.1 2036710 R 644223 CDS PAS_chr3_1060 254572383 8200021 2037904..2038407 1 NC_012965.1 hypothetical protein 2038407 8200021 PAS_chr3_1060 Pichia pastoris GS115 hypothetical protein XP_002493301.1 2037904 D 644223 CDS PAS_chr3_1061 254572385 8200022 2038747..2041056 1 NC_012965.1 Protein kinase of the Mitotic Exit Network 2041056 8200022 PAS_chr3_1061 Pichia pastoris GS115 Protein kinase of the Mitotic Exit Network XP_002493302.1 2038747 D 644223 CDS PAS_chr3_1062 254572387 8200023 2041236..2042432 1 NC_012965.1 Membrane protein of the plasma membrane and ER 2042432 8200023 PAS_chr3_1062 Pichia pastoris GS115 Membrane protein of the plasma membrane and ER XP_002493303.1 2041236 D 644223 CDS PAS_chr3_1063 254572389 8200024 2043656..2045086 1 NC_012965.1 hypothetical protein 2045086 8200024 PAS_chr3_1063 Pichia pastoris GS115 hypothetical protein XP_002493304.1 2043656 D 644223 CDS PAS_chr3_1248 254572391 8200025 2045225..2046778 1 NC_012965.1 hypothetical protein 2046778 8200025 PAS_chr3_1248 Pichia pastoris GS115 hypothetical protein XP_002493305.1 2045225 D 644223 CDS PAS_chr3_1064 254572393 8199686 complement(2047164..2049662) 1 NC_012965.1 Protein with putative serine active lipase domain 2049662 8199686 PAS_chr3_1064 Pichia pastoris GS115 Protein with putative serine active lipase domain XP_002493306.1 2047164 R 644223 CDS PAS_chr3_1065 254572395 8200026 2050228..2052360 1 NC_012965.1 Putative protein of unknown function 2052360 8200026 PAS_chr3_1065 Pichia pastoris GS115 Putative protein of unknown function XP_002493307.1 2050228 D 644223 CDS PAS_chr3_1067 254572397 8200027 complement(2057130..2058005) 1 NC_012965.1 Protein involved in rRNA processing 2058005 8200027 PAS_chr3_1067 Pichia pastoris GS115 Protein involved in rRNA processing XP_002493308.1 2057130 R 644223 CDS PAS_chr3_1068 254572399 8200028 complement(2058212..2058643) 1 NC_012965.1 Protein of unknown function that associates with ribosomes 2058643 8200028 PAS_chr3_1068 Pichia pastoris GS115 Protein of unknown function that associates with ribosomes XP_002493309.1 2058212 R 644223 CDS PAS_chr3_1249 254572401 8200029 2058812..2060029 1 NC_012965.1 hypothetical protein 2060029 8200029 PAS_chr3_1249 Pichia pastoris GS115 hypothetical protein XP_002493310.1 2058812 D 644223 CDS PAS_chr3_1069 254572403 8199687 2060200..2061507 1 NC_012965.1 Essential, non-ATPase regulatory subunit of the 26S proteasome lid 2061507 8199687 PAS_chr3_1069 Pichia pastoris GS115 Essential, non-ATPase regulatory subunit of the 26S proteasome lid XP_002493311.1 2060200 D 644223 CDS PAS_chr3_1070 254572405 8200030 complement(2061532..2063883) 1 NC_012965.1 Subunit of the nuclear pore complex (NPC) 2063883 8200030 PAS_chr3_1070 Pichia pastoris GS115 Subunit of the nuclear pore complex (NPC) XP_002493312.1 2061532 R 644223 CDS PAS_chr3_1071 254572407 8200031 complement(2064952..2065602) 1 NC_012965.1 Translation elongation factor EF-1 gamma 2065602 8200031 PAS_chr3_1071 Pichia pastoris GS115 Translation elongation factor EF-1 gamma XP_002493313.1 2064952 R 644223 CDS PAS_chr3_1072 254572409 8200032 2066255..2066797 1 NC_012965.1 hypothetical protein 2066797 8200032 PAS_chr3_1072 Pichia pastoris GS115 hypothetical protein XP_002493314.1 2066255 D 644223 CDS PAS_chr3_1073 254572411 8200033 2067129..2068496 1 NC_012965.1 Peroxisomal membrane protein (PMP) 2068496 8200033 PAS_chr3_1073 Pichia pastoris GS115 Peroxisomal membrane protein (PMP) XP_002493315.1 2067129 D 644223 CDS PAS_chr3_1074 254572413 8200034 complement(2068594..2068944) 1 NC_012965.1 hypothetical protein 2068944 8200034 PAS_chr3_1074 Pichia pastoris GS115 hypothetical protein XP_002493316.1 2068594 R 644223 CDS PAS_chr3_1075 254572415 8200035 complement(2069445..2070680) 1 NC_012965.1 hypothetical protein 2070680 8200035 PAS_chr3_1075 Pichia pastoris GS115 hypothetical protein XP_002493317.1 2069445 R 644223 CDS PAS_chr3_1250 254572417 8200036 2071117..2072205 1 NC_012965.1 hypothetical protein 2072205 8200036 PAS_chr3_1250 Pichia pastoris GS115 hypothetical protein XP_002493318.1 2071117 D 644223 CDS PAS_chr3_1076 254572419 8199688 2072446..2074149 1 NC_012965.1 Glycerol proton symporter of the plasma membrane 2074149 8199688 PAS_chr3_1076 Pichia pastoris GS115 Glycerol proton symporter of the plasma membrane XP_002493319.1 2072446 D 644223 CDS PAS_chr3_1251 254572421 8200037 complement(join(2074224..2074411,2074509..2075769)) 1 NC_012965.1 hypothetical protein 2075769 8200037 PAS_chr3_1251 Pichia pastoris GS115 hypothetical protein XP_002493320.1 2074224 R 644223 CDS PAS_chr3_1077 254572423 8199689 complement(2075877..2083160) 1 NC_012965.1 Component of the U4/U6-U5 snRNP complex, involved in the second catalytic step of splicing 2083160 8199689 PAS_chr3_1077 Pichia pastoris GS115 Component of the U4/U6-U5 snRNP complex, involved in the second catalytic step of splicing XP_002493321.1 2075877 R 644223 CDS PAS_chr3_1078 254572425 8200038 complement(2083333..2084922) 1 NC_012965.1 Subunit of the anaphase-promoting complex/cyclosome (APC/C) 2084922 8200038 PAS_chr3_1078 Pichia pastoris GS115 Subunit of the anaphase-promoting complex/cyclosome (APC/C) XP_002493322.1 2083333 R 644223 CDS PAS_chr3_1079 254572427 8200039 2085434..2086432 1 NC_012965.1 hypothetical protein 2086432 8200039 PAS_chr3_1079 Pichia pastoris GS115 hypothetical protein XP_002493323.1 2085434 D 644223 CDS PAS_chr3_1080 254572429 8200040 complement(2086522..2087676) 1 NC_012965.1 hypothetical protein 2087676 8200040 PAS_chr3_1080 Pichia pastoris GS115 hypothetical protein XP_002493324.1 2086522 R 644223 CDS PAS_chr3_1081 254572431 8200041 2088222..2088602 1 NC_012965.1 Putative protein of unknown function 2088602 8200041 PAS_chr3_1081 Pichia pastoris GS115 Putative protein of unknown function XP_002493325.1 2088222 D 644223 CDS PAS_chr3_1252 254572433 8200042 complement(2089222..2089869) 1 NC_012965.1 hypothetical protein 2089869 8200042 PAS_chr3_1252 Pichia pastoris GS115 hypothetical protein XP_002493326.1 2089222 R 644223 CDS PAS_chr3_1253 254572435 8199690 2089989..2090615 1 NC_012965.1 hypothetical protein 2090615 8199690 PAS_chr3_1253 Pichia pastoris GS115 hypothetical protein XP_002493327.1 2089989 D 644223 CDS PAS_chr3_1082 254572437 8199691 complement(2090653..2092365) 1 NC_012965.1 U2-snRNP associated splicing factor with similarity to the mammalian splicing factor SAP49 2092365 8199691 PAS_chr3_1082 Pichia pastoris GS115 U2-snRNP associated splicing factor with similarity to the mammalian splicing factor SAP49 XP_002493328.1 2090653 R 644223 CDS PAS_chr3_1083 254572439 8200043 complement(2092594..2093397) 1 NC_012965.1 Non-ATPase base subunit of the 19S regulatory particle (RP) of the 26S proteasome 2093397 8200043 PAS_chr3_1083 Pichia pastoris GS115 Non-ATPase base subunit of the 19S regulatory particle (RP) of the 26S proteasome XP_002493329.1 2092594 R 644223 CDS PAS_chr3_1084 254572441 8200044 complement(2093952..2098196) 1 NC_012965.1 Sulfite reductase beta subunit, involved in amino acid biosynthesis, transcription repressed by meth 2098196 8200044 PAS_chr3_1084 Pichia pastoris GS115 Sulfite reductase beta subunit, involved in amino acid biosynthesis, transcription repressed by meth XP_002493330.1 2093952 R 644223 CDS PAS_chr3_1085 254572443 8200045 2098934..2099593 1 NC_012965.1 Protein involved in cis-Golgi membrane traffic 2099593 8200045 PAS_chr3_1085 Pichia pastoris GS115 Protein involved in cis-Golgi membrane traffic XP_002493331.1 2098934 D 644223 CDS PAS_chr3_1086 254572445 8200046 complement(2099598..2102816) 1 NC_012965.1 Putative protein of unknown function 2102816 8200046 PAS_chr3_1086 Pichia pastoris GS115 Putative protein of unknown function XP_002493332.1 2099598 R 644223 CDS PAS_chr3_1087 254572447 8200047 complement(2103131..2104363) 1 NC_012965.1 Vacuolar aspartyl protease (proteinase A) 2104363 8200047 PAS_chr3_1087 Pichia pastoris GS115 Vacuolar aspartyl protease (proteinase A) XP_002493333.1 2103131 R 644223 CDS PAS_chr3_1254 254572449 8200048 complement(join(2104631..2106439,2106502..2106951)) 1 NC_012965.1 hypothetical protein 2106951 8200048 PAS_chr3_1254 Pichia pastoris GS115 hypothetical protein XP_002493334.1 2104631 R 644223 CDS PAS_chr3_1088 254572451 8199692 2107255..2109255 1 NC_012965.1 Pseudouridine synthase 2109255 8199692 PAS_chr3_1088 Pichia pastoris GS115 Pseudouridine synthase XP_002493335.1 2107255 D 644223 CDS PAS_chr3_1089 254572453 8200049 2109463..2110623 1 NC_012965.1 Sporulation specific protein that localizes to the spore wall 2110623 8200049 PAS_chr3_1089 Pichia pastoris GS115 Sporulation specific protein that localizes to the spore wall XP_002493336.1 2109463 D 644223 CDS PAS_chr3_1091 254572455 8200050 2111522..2113282 1 NC_012965.1 Protein kinase implicated in activation of the plasma membrane H(+)-ATPase Pma1p 2113282 8200050 PAS_chr3_1091 Pichia pastoris GS115 Protein kinase implicated in activation of the plasma membrane H(+)-ATPase Pma1p XP_002493337.1 2111522 D 644223 CDS PAS_chr3_1092 254572457 8200051 2113479..2114981 1 NC_012965.1 Protein involved in nuclear migration, part of the dynein/dynactin pathway 2114981 8200051 PAS_chr3_1092 Pichia pastoris GS115 Protein involved in nuclear migration, part of the dynein/dynactin pathway XP_002493338.1 2113479 D 644223 CDS PAS_chr3_1093 254572459 8200052 complement(join(2115032..2116145,2116186..2117486)) 1 NC_012965.1 Subunit a of vacuolar-ATPase V0 domain, one of two isoforms (Vph1p and Stv1p) 2117486 8200052 PAS_chr3_1093 Pichia pastoris GS115 Subunit a of vacuolar-ATPase V0 domain, one of two isoforms (Vph1p and Stv1p) XP_002493339.1 2115032 R 644223 CDS PAS_chr3_1095 254572461 8200053 complement(2117785..2119509) 1 NC_012965.1 Protein of unknown function, copurifies with late Golgi vesicles containing the v-SNARE Tlg2p 2119509 8200053 PAS_chr3_1095 Pichia pastoris GS115 Protein of unknown function, copurifies with late Golgi vesicles containing the v-SNARE Tlg2p XP_002493340.1 2117785 R 644223 CDS PAS_chr3_1097 254572463 8200054 2123600..2125342 1 NC_012965.1 Phosphoesterase involved in downregulation of the unfolded protein response 2125342 8200054 PAS_chr3_1097 Pichia pastoris GS115 Phosphoesterase involved in downregulation of the unfolded protein response XP_002493341.1 2123600 D 644223 CDS PAS_chr3_1098 254572465 8200055 2125451..2126023 1 NC_012965.1 One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi 2126023 8200055 PAS_chr3_1098 Pichia pastoris GS115 One of 10 subunits of the transport protein particle (TRAPP) complex of the cis-Golgi XP_002493342.1 2125451 D 644223 CDS PAS_chr3_1255 254572467 8200056 2126165..2126830 1 NC_012965.1 hypothetical protein 2126830 8200056 PAS_chr3_1255 Pichia pastoris GS115 hypothetical protein XP_002493343.1 2126165 D 644223 CDS PAS_chr3_1099 254572469 8199693 2127030..2128721 1 NC_012965.1 Glycerol proton symporter of the plasma membrane, subject to glucose-induced inactivation 2128721 8199693 PAS_chr3_1099 Pichia pastoris GS115 Glycerol proton symporter of the plasma membrane, subject to glucose-induced inactivation XP_002493344.1 2127030 D 644223 CDS PAS_chr3_1100 254572471 8200057 complement(2128841..2129755) 1 NC_012965.1 Subunit of a tRNA methyltransferase complex composed of Trm8p and Trm82p 2129755 8200057 PAS_chr3_1100 Pichia pastoris GS115 Subunit of a tRNA methyltransferase complex composed of Trm8p and Trm82p XP_002493345.1 2128841 R 644223 CDS PAS_chr3_1101 254572473 8200058 complement(2129876..2130613) 1 NC_012965.1 Mitochondrial ribosomal protein of the large subunit 2130613 8200058 PAS_chr3_1101 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002493346.1 2129876 R 644223 CDS PAS_chr3_1102 254572475 8200059 2130849..2132021 1 NC_012965.1 Predicted membrane protein required for the retention of lumenal endoplasmic reticulum proteins 2132021 8200059 PAS_chr3_1102 Pichia pastoris GS115 Predicted membrane protein required for the retention of lumenal endoplasmic reticulum proteins XP_002493347.1 2130849 D 644223 CDS PAS_chr3_1103 254572477 8200060 complement(2132075..2132839) 1 NC_012965.1 Component of the pre-60S pre-ribosomal particle 2132839 8200060 PAS_chr3_1103 Pichia pastoris GS115 Component of the pre-60S pre-ribosomal particle XP_002493348.1 2132075 R 644223 CDS PAS_chr3_1104 254572479 8200061 complement(2133109..2136597) 1 NC_012965.1 Serine-threonine kinase and endoribonuclease 2136597 8200061 PAS_chr3_1104 Pichia pastoris GS115 Serine-threonine kinase and endoribonuclease XP_002493349.1 2133109 R 644223 CDS PAS_chr3_1105 254572481 8200062 complement(2136957..2137988) 1 NC_012965.1 Uracil-DNA glycosylase 2137988 8200062 PAS_chr3_1105 Pichia pastoris GS115 Uracil-DNA glycosylase XP_002493350.1 2136957 R 644223 CDS PAS_chr3_1106 254572483 8200063 2138357..2140024 1 NC_012965.1 Putative protein of unknown function 2140024 8200063 PAS_chr3_1106 Pichia pastoris GS115 Putative protein of unknown function XP_002493351.1 2138357 D 644223 CDS PAS_chr3_1256 254572485 8200064 2140328..2141533 1 NC_012965.1 hypothetical protein 2141533 8200064 PAS_chr3_1256 Pichia pastoris GS115 hypothetical protein XP_002493352.1 2140328 D 644223 CDS PAS_chr3_1107 254572487 8199694 2141684..2143408 1 NC_012965.1 Protein required for fusion of cvt-vesicles and autophagosomes with the vacuole 2143408 8199694 PAS_chr3_1107 Pichia pastoris GS115 Protein required for fusion of cvt-vesicles and autophagosomes with the vacuole XP_002493353.1 2141684 D 644223 CDS PAS_chr3_1108 254572489 8200065 complement(2143405..2144337) 1 NC_012965.1 Plasma membrane protein involved in zinc metabolism and osmotin-induced apoptosis 2144337 8200065 PAS_chr3_1108 Pichia pastoris GS115 Plasma membrane protein involved in zinc metabolism and osmotin-induced apoptosis XP_002493354.1 2143405 R 644223 CDS PAS_chr3_1109 254572491 8200066 2144597..2145412 1 NC_012965.1 Protein that localizes to the nucleus and is involved in transcription regulation 2145412 8200066 PAS_chr3_1109 Pichia pastoris GS115 Protein that localizes to the nucleus and is involved in transcription regulation XP_002493355.1 2144597 D 644223 CDS PAS_chr3_1110 254572493 8200067 complement(2146546..2148030) 1 NC_012965.1 Mitochondrial tyrosyl-tRNA synthetase 2148030 8200067 PAS_chr3_1110 Pichia pastoris GS115 Mitochondrial tyrosyl-tRNA synthetase XP_002493356.1 2146546 R 644223 CDS PAS_chr3_1111 254572495 8200068 2149185..2149988 1 NC_012965.1 Iron-sulfur protein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p) 2149988 8200068 PAS_chr3_1111 Pichia pastoris GS115 Iron-sulfur protein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p) XP_002493357.1 2149185 D 644223 CDS PAS_chr3_1112 254572497 8200069 2150267..2152501 1 NC_012965.1 DNA ligase found in the nucleus and mitochondria 2152501 8200069 PAS_chr3_1112 Pichia pastoris GS115 DNA ligase found in the nucleus and mitochondria XP_002493358.1 2150267 D 644223 CDS PAS_chr3_1113 254572499 8200070 complement(2153364..2155031) 1 NC_012965.1 hypothetical protein 2155031 8200070 PAS_chr3_1113 Pichia pastoris GS115 hypothetical protein XP_002493359.1 2153364 R 644223 CDS PAS_chr3_1114 254572501 8200071 complement(join(2155274..2155555,2155616..2155711)) 1 NC_012965.1 Nuclear envelope protein, interacts with GDP-bound Gsp1p and with proteins of the nuclear pore 2155711 8200071 PAS_chr3_1114 Pichia pastoris GS115 Nuclear envelope protein, interacts with GDP-bound Gsp1p and with proteins of the nuclear pore XP_002493360.1 2155274 R 644223 CDS PAS_chr3_1115 254572503 8200072 2156707..2158011 1 NC_012965.1 Mannose-6-phosphate isomerase, catalyzes the interconversion of fructose-6-P and mannose-6-P 2158011 8200072 PAS_chr3_1115 Pichia pastoris GS115 Mannose-6-phosphate isomerase, catalyzes the interconversion of fructose-6-P and mannose-6-P XP_002493361.1 2156707 D 644223 CDS PAS_chr3_1116 254572505 8200073 2158537..2159205 1 NC_012965.1 hypothetical protein 2159205 8200073 PAS_chr3_1116 Pichia pastoris GS115 hypothetical protein XP_002493362.1 2158537 D 644223 CDS PAS_chr3_1117 254572507 8199458 complement(join(2159291..2159523,2159586..2159628)) 1 NC_012965.1 Mitochondrial ribosomal protein of the small subunit 2159628 8199458 PAS_chr3_1117 Pichia pastoris GS115 Mitochondrial ribosomal protein of the small subunit XP_002493363.1 2159291 R 644223 CDS PAS_chr3_1118 254572509 8199459 2159768..2161933 1 NC_012965.1 Essential protein involved in ribosome biogenesis 2161933 8199459 PAS_chr3_1118 Pichia pastoris GS115 Essential protein involved in ribosome biogenesis XP_002493364.1 2159768 D 644223 CDS PAS_chr3_1119 254572511 8200152 complement(2162049..2162441) 1 NC_012965.1 Mitochondrial matrix acyl carrier protein, involved in biosynthesis of octanoate 2162441 8200152 PAS_chr3_1119 Pichia pastoris GS115 Mitochondrial matrix acyl carrier protein, involved in biosynthesis of octanoate XP_002493365.1 2162049 R 644223 CDS PAS_chr3_1120 254572513 8200153 2162632..2163162 1 NC_012965.1 Mitochondrial protein 2163162 8200153 PAS_chr3_1120 Pichia pastoris GS115 Mitochondrial protein XP_002493366.1 2162632 D 644223 CDS PAS_chr3_1121 254572515 8200154 2163407..2164396 1 NC_012965.1 Subunit of the ARP2/3 complex 2164396 8200154 PAS_chr3_1121 Pichia pastoris GS115 Subunit of the ARP2/3 complex XP_002493367.1 2163407 D 644223 CDS PAS_chr3_1122 254572517 8200155 2164600..2165895 1 NC_012965.1 Subunit of tRNA (1-methyladenosine) methyltransferase with Gcd14p 2165895 8200155 PAS_chr3_1122 Pichia pastoris GS115 Subunit of tRNA (1-methyladenosine) methyltransferase with Gcd14p XP_002493368.1 2164600 D 644223 CDS PAS_chr3_1257 254572519 8200156 complement(2165910..2166788) 1 NC_012965.1 hypothetical protein 2166788 8200156 PAS_chr3_1257 Pichia pastoris GS115 hypothetical protein XP_002493369.1 2165910 R 644223 CDS PAS_chr3_1123 254572521 8199695 complement(2167042..2168145) 1 NC_012965.1 Protein with similarity to mammalian developmentally regulated GTP-binding protein 2168145 8199695 PAS_chr3_1123 Pichia pastoris GS115 Protein with similarity to mammalian developmentally regulated GTP-binding protein XP_002493370.1 2167042 R 644223 CDS PAS_chr3_1124 254572523 8200157 complement(join(2168270..2169603,2169707..2170322)) 1 NC_012965.1 Protein of unknown function, predicted to contain a single transmembrane domain 2170322 8200157 PAS_chr3_1124 Pichia pastoris GS115 Protein of unknown function, predicted to contain a single transmembrane domain XP_002493371.1 2168270 R 644223 CDS PAS_chr3_1126 254572525 8200158 2170764..2171513 1 NC_012965.1 6-phosphogluconolactonase, catalyzes the second step of the pentose phosphate pathway 2171513 8200158 PAS_chr3_1126 Pichia pastoris GS115 6-phosphogluconolactonase, catalyzes the second step of the pentose phosphate pathway XP_002493372.1 2170764 D 644223 CDS PAS_chr3_1127 254572527 8200159 complement(join(2171579..2173815,2173878..2174673)) 1 NC_012965.1 Phosphatidylserine decarboxylase of the Golgi and vacuolar membranes 2174673 8200159 PAS_chr3_1127 Pichia pastoris GS115 Phosphatidylserine decarboxylase of the Golgi and vacuolar membranes XP_002493373.1 2171579 R 644223 CDS PAS_chr3_1128 254572529 8200160 2175189..2176535 1 NC_012965.1 Histone acetyltransferase, acetylates N-terminal lysines on histones H2B and H3 2176535 8200160 PAS_chr3_1128 Pichia pastoris GS115 Histone acetyltransferase, acetylates N-terminal lysines on histones H2B and H3 XP_002493374.1 2175189 D 644223 CDS PAS_chr3_1129 254572531 8200161 complement(2176583..2177350) 1 NC_012965.1 Alpha 5 subunit of the 20S proteasome involved in ubiquitin-dependent catabolism 2177350 8200161 PAS_chr3_1129 Pichia pastoris GS115 Alpha 5 subunit of the 20S proteasome involved in ubiquitin-dependent catabolism XP_002493375.1 2176583 R 644223 CDS PAS_chr3_1130 254572533 8200162 2177546..2178517 1 NC_012965.1 hypothetical protein 2178517 8200162 PAS_chr3_1130 Pichia pastoris GS115 hypothetical protein XP_002493376.1 2177546 D 644223 CDS PAS_chr3_1258 254572535 8200163 2178690..2179256 1 NC_012965.1 hypothetical protein 2179256 8200163 PAS_chr3_1258 Pichia pastoris GS115 hypothetical protein XP_002493377.1 2178690 D 644223 CDS PAS_chr3_1131 254572537 8199696 2179521..2182391 1 NC_012965.1 Protein involved in programmed cell death 2182391 8199696 PAS_chr3_1131 Pichia pastoris GS115 Protein involved in programmed cell death XP_002493378.1 2179521 D 644223 CDS PAS_chr3_1132 254572539 8200164 2182854..2184158 1 NC_012965.1 Kynurenine aminotransferase, catalyzes formation of kynurenic acid from kynurenine 2184158 8200164 PAS_chr3_1132 Pichia pastoris GS115 Kynurenine aminotransferase, catalyzes formation of kynurenic acid from kynurenine XP_002493379.1 2182854 D 644223 CDS PAS_chr3_1133 254572541 8200165 2184251..2186233 1 NC_012965.1 Nucleosomal histone H3-Lys79 methylase, associates with transcriptionally active genes 2186233 8200165 PAS_chr3_1133 Pichia pastoris GS115 Nucleosomal histone H3-Lys79 methylase, associates with transcriptionally active genes XP_002493380.1 2184251 D 644223 CDS PAS_chr3_1134 254572543 8200166 complement(2186293..2190648) 1 NC_012965.1 Subunit of the RNA polymerase II mediator complex 2190648 8200166 PAS_chr3_1134 Pichia pastoris GS115 Subunit of the RNA polymerase II mediator complex XP_002493381.1 2186293 R 644223 CDS PAS_chr3_1135 254572545 8200167 join(2190750..2190756,2190807..2191027) 1 NC_012965.1 Mitochondrial ribosomal protein of the large subunit 2191027 8200167 PAS_chr3_1135 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002493382.1 2190750 D 644223 CDS PAS_chr3_1136 254572547 8200168 2191340..2194066 1 NC_012965.1 Protein that forms a complex with Spt4p 2194066 8200168 PAS_chr3_1136 Pichia pastoris GS115 Protein that forms a complex with Spt4p XP_002493383.1 2191340 D 644223 CDS PAS_chr3_1259 254572549 8200169 2194077..2194883 1 NC_012965.1 hypothetical protein 2194883 8200169 PAS_chr3_1259 Pichia pastoris GS115 hypothetical protein XP_002493384.1 2194077 D 644223 CDS PAS_chr3_1137 254572551 8199697 complement(2195057..2195566) 1 NC_012965.1 hypothetical protein 2195566 8199697 PAS_chr3_1137 Pichia pastoris GS115 hypothetical protein XP_002493385.1 2195057 R 644223 CDS PAS_chr3_1138 254572553 8200170 2195778..2196329 1 NC_012965.1 Adenine phosphoribosyltransferase, catalyzes the formation of AMP 2196329 8200170 PAS_chr3_1138 Pichia pastoris GS115 Adenine phosphoribosyltransferase, catalyzes the formation of AMP XP_002493386.1 2195778 D 644223 CDS PAS_chr3_1139 254572555 8200171 complement(2197369..2198871) 1 NC_012965.1 Sorting nexin 2198871 8200171 PAS_chr3_1139 Pichia pastoris GS115 Sorting nexin XP_002493387.1 2197369 R 644223 CDS PAS_chr3_1140 254572557 8200172 join(2199029..2199071,2199120..2199373) 1 NC_012965.1 Cytoplasmic light chain dynein, microtubule motor protein 2199373 8200172 PAS_chr3_1140 Pichia pastoris GS115 Cytoplasmic light chain dynein, microtubule motor protein XP_002493388.1 2199029 D 644223 CDS PAS_chr3_1141 254572559 8200173 complement(2199396..2200475) 1 NC_012965.1 hypothetical protein 2200475 8200173 PAS_chr3_1141 Pichia pastoris GS115 hypothetical protein XP_002493389.1 2199396 R 644223 CDS PAS_chr3_1142 254572561 8200174 2200649..2201677 1 NC_012965.1 Subunit of the oligosaccharyltransferase complex of the ER lumen 2201677 8200174 PAS_chr3_1142 Pichia pastoris GS115 Subunit of the oligosaccharyltransferase complex of the ER lumen XP_002493390.1 2200649 D 644223 CDS PAS_chr3_1143 254572563 8200175 complement(2201847..2202869) 1 NC_012965.1 Putative protein of unknown function 2202869 8200175 PAS_chr3_1143 Pichia pastoris GS115 Putative protein of unknown function XP_002493391.1 2201847 R 644223 CDS PAS_c131_0001 254572565 8200176 complement(join(2211603..2211786,2211845..2212034,2212086..2212170)) 1 NC_012965.1 hypothetical protein 2212170 8200176 PAS_c131_0001 Pichia pastoris GS115 hypothetical protein XP_002493392.1 2211603 R 644223 CDS PAS_c131_0002 254572567 8199613 complement(2212554..2214872) 1 NC_012965.1 hypothetical protein 2214872 8199613 PAS_c131_0002 Pichia pastoris GS115 hypothetical protein XP_002493393.1 2212554 R 644223 CDS PAS_c131_0003 254572569 8199614 complement(2215011..2216342) 1 NC_012965.1 hypothetical protein 2216342 8199614 PAS_c131_0003 Pichia pastoris GS115 hypothetical protein XP_002493394.1 2215011 R 644223 CDS PAS_c131_0004 254572571 8199615 complement(2217212..2219875) 1 NC_012965.1 hypothetical protein 2219875 8199615 PAS_c131_0004 Pichia pastoris GS115 hypothetical protein XP_002493395.1 2217212 R 644223 CDS PAS_c131_0005 254572573 8199616 complement(2220232..2221383) 1 NC_012965.1 hypothetical protein 2221383 8199616 PAS_c131_0005 Pichia pastoris GS115 hypothetical protein XP_002493396.1 2220232 R 644223 CDS PAS_c131_0006 254572575 8199617 complement(2221865..2222686) 1 NC_012965.1 hypothetical protein 2222686 8199617 PAS_c131_0006 Pichia pastoris GS115 hypothetical protein XP_002493397.1 2221865 R 644223 CDS PAS_c131_0007 254572577 8199618 2222808..2224112 1 NC_012965.1 hypothetical protein 2224112 8199618 PAS_c131_0007 Pichia pastoris GS115 hypothetical protein XP_002493398.1 2222808 D 644223 CDS PAS_c131_0008 254572579 8199619 complement(2224200..2224658) 1 NC_012965.1 hypothetical protein 2224658 8199619 PAS_c131_0008 Pichia pastoris GS115 hypothetical protein XP_002493399.1 2224200 R 644223 CDS PAS_c131_0009 254572581 8199620 complement(2224840..2226636) 1 NC_012965.1 hypothetical protein 2226636 8199620 PAS_c131_0009 Pichia pastoris GS115 hypothetical protein XP_002493400.1 2224840 R 644223 CDS PAS_c131_0010 254572583 8199621 2226989..2228980 1 NC_012965.1 hypothetical protein 2228980 8199621 PAS_c131_0010 Pichia pastoris GS115 hypothetical protein XP_002493401.1 2226989 D 644223 CDS PAS_c131_0011 254572585 8199622 complement(2229055..2229456) 1 NC_012965.1 hypothetical protein 2229456 8199622 PAS_c131_0011 Pichia pastoris GS115 hypothetical protein XP_002493402.1 2229055 R 644223 CDS PAS_c131_0012 254572587 8199623 2229850..2230263 1 NC_012965.1 hypothetical protein 2230263 8199623 PAS_c131_0012 Pichia pastoris GS115 hypothetical protein XP_002493403.1 2229850 D 644223 CDS PAS_c131_0013 254572589 8199624 complement(2230376..2231029) 1 NC_012965.1 hypothetical protein 2231029 8199624 PAS_c131_0013 Pichia pastoris GS115 hypothetical protein XP_002493404.1 2230376 R 644223 CDS PAS_c131_0014 254572591 8199625 join(2231211..2231275,2231373..2231607) 1 NC_012965.1 hypothetical protein 2231607 8199625 PAS_c131_0014 Pichia pastoris GS115 hypothetical protein XP_002493405.1 2231211 D 644223 CDS PAS_c131_0015 254572593 8199626 complement(2231673..2232974) 1 NC_012965.1 hypothetical protein 2232974 8199626 PAS_c131_0015 Pichia pastoris GS115 hypothetical protein XP_002493406.1 2231673 R 644223 CDS PAS_c131_0016 254572595 8199627 complement(2233110..2234240) 1 NC_012965.1 hypothetical protein 2234240 8199627 PAS_c131_0016 Pichia pastoris GS115 hypothetical protein XP_002493407.1 2233110 R 644223 CDS PAS_c131_0017 254572597 8199628 complement(2234512..2235933) 1 NC_012965.1 hypothetical protein 2235933 8199628 PAS_c131_0017 Pichia pastoris GS115 hypothetical protein XP_002493408.1 2234512 R 644223 CDS PAS_c131_0021 254572599 8199629 complement(join(2236187..2237665,2237687..2237701)) 1 NC_012965.1 vacuolar ATP synthase subunit B 2237701 8199629 PAS_c131_0021 Pichia pastoris GS115 vacuolar ATP synthase subunit B XP_002493409.1 2236187 R 644223 CDS PAS_c131_0019 254572601 8199631 2241563..2242147 1 NC_012965.1 hypothetical protein 2242147 8199631 PAS_c131_0019 Pichia pastoris GS115 hypothetical protein XP_002493410.1 2241563 D 644223 CDS PAS_c131_0020 254572603 8199630 complement(2243457..2245160) 1 NC_012965.1 hypothetical protein 2245160 8199630 PAS_c131_0020 Pichia pastoris GS115 hypothetical protein XP_002493411.1 2243457 R 644223 CDS PAS_chr4_0003 254572606 8200531 4931..6505 1 NC_012966.1 hypothetical protein 6505 8200531 PAS_chr4_0003 Pichia pastoris GS115 hypothetical protein XP_002493412.1 4931 D 644223 CDS PAS_chr4_0005 254572608 8200532 9831..12215 1 NC_012966.1 Proton-coupled oligopeptide transporter of the plasma membrane 12215 8200532 PAS_chr4_0005 Pichia pastoris GS115 Proton-coupled oligopeptide transporter of the plasma membrane XP_002493413.1 9831 D 644223 CDS PAS_chr4_0006 254572610 8200533 complement(12916..14010) 1 NC_012966.1 High affinity nicotinic acid plasma membrane permease 14010 8200533 PAS_chr4_0006 Pichia pastoris GS115 High affinity nicotinic acid plasma membrane permease XP_002493414.1 12916 R 644223 CDS PAS_chr4_0911 254572612 8200534 complement(14407..16002) 1 NC_012966.1 hypothetical protein 16002 8200534 PAS_chr4_0911 Pichia pastoris GS115 hypothetical protein XP_002493415.1 14407 R 644223 CDS PAS_chr4_0008 254572614 8201314 complement(17061..18581) 1 NC_012966.1 Low-affinity Fe(II) transporter of the plasma membrane 18581 8201314 PAS_chr4_0008 Pichia pastoris GS115 Low-affinity Fe(II) transporter of the plasma membrane XP_002493416.1 17061 R 644223 CDS PAS_chr4_0009 254572616 8200535 complement(20479..21354) 1 NC_012966.1 hypothetical protein 21354 8200535 PAS_chr4_0009 Pichia pastoris GS115 hypothetical protein XP_002493417.1 20479 R 644223 CDS PAS_chr4_0010 254572618 8200536 22493..22894 1 NC_012966.1 hypothetical protein 22894 8200536 PAS_chr4_0010 Pichia pastoris GS115 hypothetical protein XP_002493418.1 22493 D 644223 CDS PAS_chr4_0011 254572620 8200537 complement(23397..25043) 1 NC_012966.1 Maltose permease, high-affinity maltose transporter (alpha-glucoside transporter) 25043 8200537 PAS_chr4_0011 Pichia pastoris GS115 Maltose permease, high-affinity maltose transporter (alpha-glucoside transporter) XP_002493419.1 23397 R 644223 CDS PAS_chr4_0012 254572622 8200538 25358..27346 1 NC_012966.1 hypothetical protein 27346 8200538 PAS_chr4_0012 Pichia pastoris GS115 hypothetical protein XP_002493420.1 25358 D 644223 CDS PAS_chr4_0013 254572624 8200539 27648..30167 1 NC_012966.1 hypothetical protein 30167 8200539 PAS_chr4_0013 Pichia pastoris GS115 hypothetical protein XP_002493421.1 27648 D 644223 CDS PAS_chr4_0014 254572626 8200540 30313..32751 1 NC_012966.1 hypothetical protein 32751 8200540 PAS_chr4_0014 Pichia pastoris GS115 hypothetical protein XP_002493422.1 30313 D 644223 CDS PAS_chr4_0018 254572628 8200541 42361..42693 1 NC_012966.1 Cytochrome c, isoform 1 42693 8200541 PAS_chr4_0018 Pichia pastoris GS115 Cytochrome c, isoform 1 XP_002493423.1 42361 D 644223 CDS PAS_chr4_0019 254572630 8200542 43060..45330 1 NC_012966.1 Component of the SPS plasma membrane amino acid sensor system (Ssy1p-Ptr3p-Ssy5p) 45330 8200542 PAS_chr4_0019 Pichia pastoris GS115 Component of the SPS plasma membrane amino acid sensor system (Ssy1p-Ptr3p-Ssy5p) XP_002493424.1 43060 D 644223 CDS PAS_chr4_0020 254572632 8200543 complement(45327..46088) 1 NC_012966.1 Component of the spliceosome complex involved in pre-mRNA splicing 46088 8200543 PAS_chr4_0020 Pichia pastoris GS115 Component of the spliceosome complex involved in pre-mRNA splicing XP_002493425.1 45327 R 644223 CDS PAS_chr4_0021 254572634 8201114 46215..47867 1 NC_012966.1 Guanosine diphosphatase located in the Golgi 47867 8201114 PAS_chr4_0021 Pichia pastoris GS115 Guanosine diphosphatase located in the Golgi XP_002493426.1 46215 D 644223 CDS PAS_chr4_0912 254572636 8201115 48112..49848 1 NC_012966.1 hypothetical protein 49848 8201115 PAS_chr4_0912 Pichia pastoris GS115 hypothetical protein XP_002493427.1 48112 D 644223 CDS PAS_chr4_0022 254572638 8201315 50272..53898 1 NC_012966.1 Ubiquitin-specific protease that may play a role in ubiquitin precursor processing 53898 8201315 PAS_chr4_0022 Pichia pastoris GS115 Ubiquitin-specific protease that may play a role in ubiquitin precursor processing XP_002493428.1 50272 D 644223 CDS PAS_chr4_0023 254572640 8201116 complement(53972..54865) 1 NC_012966.1 Putative pantetheine-phosphate adenylyltransferase (PPAT) 54865 8201116 PAS_chr4_0023 Pichia pastoris GS115 Putative pantetheine-phosphate adenylyltransferase (PPAT) XP_002493429.1 53972 R 644223 CDS PAS_chr4_0024 254572642 8201117 55215..55499 1 NC_012966.1 hypothetical protein 55499 8201117 PAS_chr4_0024 Pichia pastoris GS115 hypothetical protein XP_002493430.1 55215 D 644223 CDS PAS_chr4_0026 254572644 8201118 complement(57892..59430) 1 NC_012966.1 hypothetical protein 59430 8201118 PAS_chr4_0026 Pichia pastoris GS115 hypothetical protein XP_002493431.1 57892 R 644223 CDS PAS_chr4_0027 254572646 8201119 60172..61335 1 NC_012966.1 hypothetical protein 61335 8201119 PAS_chr4_0027 Pichia pastoris GS115 hypothetical protein XP_002493432.1 60172 D 644223 CDS PAS_chr4_0028 254572648 8201120 complement(61330..61902) 1 NC_012966.1 Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p) 61902 8201120 PAS_chr4_0028 Pichia pastoris GS115 Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p) XP_002493433.1 61330 R 644223 CDS PAS_chr4_0029 254572650 8201121 62038..63753 1 NC_012966.1 hypothetical protein 63753 8201121 PAS_chr4_0029 Pichia pastoris GS115 hypothetical protein XP_002493434.1 62038 D 644223 CDS PAS_chr4_0030 254572652 8201122 complement(63794..65884) 1 NC_012966.1 Putative ATP-dependent RNA helicase of the DEAD-box family involved in ribosomal biogenesis 65884 8201122 PAS_chr4_0030 Pichia pastoris GS115 Putative ATP-dependent RNA helicase of the DEAD-box family involved in ribosomal biogenesis XP_002493435.1 63794 R 644223 CDS PAS_chr4_0031 254572654 8201123 66039..66815 1 NC_012966.1 RNA polymerase III subunit C37 66815 8201123 PAS_chr4_0031 Pichia pastoris GS115 RNA polymerase III subunit C37 XP_002493436.1 66039 D 644223 CDS PAS_chr4_0032 254572656 8201124 complement(join(66812..67713,67764..67773)) 1 NC_012966.1 Alpha subunit of the translation initiation factor eIF2B 67773 8201124 PAS_chr4_0032 Pichia pastoris GS115 Alpha subunit of the translation initiation factor eIF2B XP_002493437.1 66812 R 644223 CDS PAS_chr4_0033 254572658 8201125 68060..70519 1 NC_012966.1 Mitochondrial elongation factor involved in translational elongation 70519 8201125 PAS_chr4_0033 Pichia pastoris GS115 Mitochondrial elongation factor involved in translational elongation XP_002493438.1 68060 D 644223 CDS PAS_chr4_0034 254572660 8201126 70728..71483 1 NC_012966.1 Subunit of heterotrimeric Replication Protein A (RPA) 71483 8201126 PAS_chr4_0034 Pichia pastoris GS115 Subunit of heterotrimeric Replication Protein A (RPA) XP_002493439.1 70728 D 644223 CDS PAS_chr4_0035 254572662 8201127 complement(71514..76160) 1 NC_012966.1 Putative helicase 76160 8201127 PAS_chr4_0035 Pichia pastoris GS115 Putative helicase XP_002493440.1 71514 R 644223 CDS PAS_chr4_0037 254572664 8201128 join(78293..79571,79666..79922) 1 NC_012966.1 Protein kinase involved in the response to oxidative and osmotic stress 79922 8201128 PAS_chr4_0037 Pichia pastoris GS115 Protein kinase involved in the response to oxidative and osmotic stress XP_002493441.1 78293 D 644223 CDS PAS_chr4_0913 254572666 8201129 join(80071..80115,80154..81623) 1 NC_012966.1 hypothetical protein 81623 8201129 PAS_chr4_0913 Pichia pastoris GS115 hypothetical protein XP_002493442.1 80071 D 644223 CDS PAS_chr4_0038 254572668 8201316 82481..85636 1 NC_012966.1 Translational elongation factor 3, stimulates the binding of aminoacyl-tRNA (AA-tRNA) to ribosomes 85636 8201316 PAS_chr4_0038 Pichia pastoris GS115 Translational elongation factor 3, stimulates the binding of aminoacyl-tRNA (AA-tRNA) to ribosomes XP_002493443.1 82481 D 644223 CDS PAS_chr4_0039 254572670 8201130 86304..88196 1 NC_012966.1 Meiosis-specific protein with similarity to phospholipase B 88196 8201130 PAS_chr4_0039 Pichia pastoris GS115 Meiosis-specific protein with similarity to phospholipase B XP_002493444.1 86304 D 644223 CDS PAS_chr4_0040 254572672 8201131 complement(88210..88887) 1 NC_012966.1 hypothetical protein 88887 8201131 PAS_chr4_0040 Pichia pastoris GS115 hypothetical protein XP_002493445.1 88210 R 644223 CDS PAS_chr4_0914 254572674 8201132 complement(89346..89711) 1 NC_012966.1 hypothetical protein 89711 8201132 PAS_chr4_0914 Pichia pastoris GS115 hypothetical protein XP_002493446.1 89346 R 644223 CDS PAS_chr4_0041 254572676 8201317 complement(90070..90459) 1 NC_012966.1 Protein component of the large (60S) ribosomal subunit 90459 8201317 PAS_chr4_0041 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit XP_002493447.1 90070 R 644223 CDS PAS_chr4_0915 254572678 8201133 complement(90886..91266) 1 NC_012966.1 hypothetical protein 91266 8201133 PAS_chr4_0915 Pichia pastoris GS115 hypothetical protein XP_002493448.1 90886 R 644223 CDS PAS_chr4_0042 254572680 8201318 complement(92062..92544) 1 NC_012966.1 hypothetical protein 92544 8201318 PAS_chr4_0042 Pichia pastoris GS115 hypothetical protein XP_002493449.1 92062 R 644223 CDS PAS_chr4_0043 254572682 8201134 complement(93081..94586) 1 NC_012966.1 Mitochondrial aldehyde dehydrogenase 94586 8201134 PAS_chr4_0043 Pichia pastoris GS115 Mitochondrial aldehyde dehydrogenase XP_002493450.1 93081 R 644223 CDS PAS_chr4_0044 254572684 8201135 complement(95236..97077) 1 NC_012966.1 hypothetical protein 97077 8201135 PAS_chr4_0044 Pichia pastoris GS115 hypothetical protein XP_002493451.1 95236 R 644223 CDS PAS_chr4_0045 254572686 8201136 97836..98864 1 NC_012966.1 hypothetical protein 98864 8201136 PAS_chr4_0045 Pichia pastoris GS115 hypothetical protein XP_002493452.1 97836 D 644223 CDS PAS_chr4_0046 254572688 8201137 complement(99138..100178) 1 NC_012966.1 Mitochondrial outer membrane and cell wall localized SUN family member 100178 8201137 PAS_chr4_0046 Pichia pastoris GS115 Mitochondrial outer membrane and cell wall localized SUN family member XP_002493453.1 99138 R 644223 CDS PAS_chr4_0047 254572690 8201138 complement(100931..101815) 1 NC_012966.1 Peripheral membrane protein located at Vid (vacuole import and degradation) vesicles 101815 8201138 PAS_chr4_0047 Pichia pastoris GS115 Peripheral membrane protein located at Vid (vacuole import and degradation) vesicles XP_002493454.1 100931 R 644223 CDS PAS_chr4_0048 254572692 8201139 102215..104515 1 NC_012966.1 Intracellular beta-1,3-endoglucanase, expression is induced during sporulation 104515 8201139 PAS_chr4_0048 Pichia pastoris GS115 Intracellular beta-1,3-endoglucanase, expression is induced during sporulation XP_002493455.1 102215 D 644223 CDS PAS_chr4_0049 254572694 8201140 104680..105546 1 NC_012966.1 Mitochondrial protein, putative inner membrane transporter 105546 8201140 PAS_chr4_0049 Pichia pastoris GS115 Mitochondrial protein, putative inner membrane transporter XP_002493456.1 104680 D 644223 CDS PAS_chr4_0050 254572696 8201141 complement(105601..106449) 1 NC_012966.1 Chorismate mutase, catalyzes the conversion of chorismate to prephenate 106449 8201141 PAS_chr4_0050 Pichia pastoris GS115 Chorismate mutase, catalyzes the conversion of chorismate to prephenate XP_002493457.1 105601 R 644223 CDS PAS_chr4_0051 254572698 8201142 complement(106739..107680) 1 NC_012966.1 Probable Hsp40p co-chaperone, has a DnaJ-like domain 107680 8201142 PAS_chr4_0051 Pichia pastoris GS115 Probable Hsp40p co-chaperone, has a DnaJ-like domain XP_002493458.1 106739 R 644223 CDS PAS_chr4_0052 254572700 8201143 complement(107820..109082) 1 NC_012966.1 hypothetical protein 109082 8201143 PAS_chr4_0052 Pichia pastoris GS115 hypothetical protein XP_002493459.1 107820 R 644223 CDS PAS_chr4_0054 254572702 8201144 111582..114773 1 NC_012966.1 hypothetical protein 114773 8201144 PAS_chr4_0054 Pichia pastoris GS115 hypothetical protein XP_002493460.1 111582 D 644223 CDS PAS_chr4_0055 254572704 8201145 complement(114813..116495) 1 NC_012966.1 Protoporphyrinogen oxidase 116495 8201145 PAS_chr4_0055 Pichia pastoris GS115 Protoporphyrinogen oxidase XP_002493461.1 114813 R 644223 CDS PAS_chr4_0058 254572706 8201146 complement(117872..119011) 1 NC_012966.1 hypothetical protein 119011 8201146 PAS_chr4_0058 Pichia pastoris GS115 hypothetical protein XP_002493462.1 117872 R 644223 CDS PAS_chr4_0059 254572708 8201147 119176..120147 1 NC_012966.1 hypothetical protein 120147 8201147 PAS_chr4_0059 Pichia pastoris GS115 hypothetical protein XP_002493463.1 119176 D 644223 CDS PAS_chr4_0060 254572710 8201148 complement(120152..120622) 1 NC_012966.1 Evolutionarily conserved glucosamine-6-phosphate acetyltransferase 120622 8201148 PAS_chr4_0060 Pichia pastoris GS115 Evolutionarily conserved glucosamine-6-phosphate acetyltransferase XP_002493464.1 120152 R 644223 CDS PAS_chr4_0916 254572712 8201149 complement(120724..122877) 1 NC_012966.1 hypothetical protein 122877 8201149 PAS_chr4_0916 Pichia pastoris GS115 hypothetical protein XP_002493465.1 120724 R 644223 CDS PAS_chr4_0061 254572714 8201319 complement(join(123273..123453,123522..123556)) 1 NC_012966.1 Component of the RNA polymerase II general transcription and DNA repair factor TFIIH 123556 8201319 PAS_chr4_0061 Pichia pastoris GS115 Component of the RNA polymerase II general transcription and DNA repair factor TFIIH XP_002493466.1 123273 R 644223 CDS PAS_chr4_0062 254572716 8201150 123739..126957 1 NC_012966.1 Vacuolar membrane protein 126957 8201150 PAS_chr4_0062 Pichia pastoris GS115 Vacuolar membrane protein XP_002493467.1 123739 D 644223 CDS PAS_chr4_0063 254572718 8201151 127078..128520 1 NC_012966.1 C-24(28) sterol reductase, catalyzes the final step in ergosterol biosynthesis 128520 8201151 PAS_chr4_0063 Pichia pastoris GS115 C-24(28) sterol reductase, catalyzes the final step in ergosterol biosynthesis XP_002493468.1 127078 D 644223 CDS PAS_chr4_0064 254572720 8201152 complement(128559..129335) 1 NC_012966.1 hypothetical protein 129335 8201152 PAS_chr4_0064 Pichia pastoris GS115 hypothetical protein XP_002493469.1 128559 R 644223 CDS PAS_chr4_0065 254572722 8201153 129794..130816 1 NC_012966.1 Protein involved in synthesis of the thiamine precursor hydroxymethylpyrimidine (HMP) 130816 8201153 PAS_chr4_0065 Pichia pastoris GS115 Protein involved in synthesis of the thiamine precursor hydroxymethylpyrimidine (HMP) XP_002493470.1 129794 D 644223 CDS PAS_chr4_0066 254572724 8201154 complement(join(131003..131748,131806..131812)) 1 NC_012966.1 Alpha 1 subunit of the 20S core complex of the 26S proteasome 131812 8201154 PAS_chr4_0066 Pichia pastoris GS115 Alpha 1 subunit of the 20S core complex of the 26S proteasome XP_002493471.1 131003 R 644223 CDS PAS_chr4_0067 254572726 8201155 complement(131996..134065) 1 NC_012966.1 Mitochondrial ribosomal protein of the small subunit 134065 8201155 PAS_chr4_0067 Pichia pastoris GS115 Mitochondrial ribosomal protein of the small subunit XP_002493472.1 131996 R 644223 CDS PAS_chr4_0068 254572728 8201156 134213..134977 1 NC_012966.1 hypothetical protein 134977 8201156 PAS_chr4_0068 Pichia pastoris GS115 hypothetical protein XP_002493473.1 134213 D 644223 CDS PAS_chr4_0069 254572730 8201157 complement(135055..136053) 1 NC_012966.1 Nucleosome assembly factor, involved in chromatin assembly and disassembly 136053 8201157 PAS_chr4_0069 Pichia pastoris GS115 Nucleosome assembly factor, involved in chromatin assembly and disassembly XP_002493474.1 135055 R 644223 CDS PAS_chr4_0070 254572732 8201158 136388..137503 1 NC_012966.1 hypothetical protein 137503 8201158 PAS_chr4_0070 Pichia pastoris GS115 hypothetical protein XP_002493475.1 136388 D 644223 CDS PAS_chr4_0072 254572734 8201159 139138..140412 1 NC_012966.1 Protein required, along with Dph2p, Kti11p, Jjj3p, and Dph5p, for synthesis of diphthamide 140412 8201159 PAS_chr4_0072 Pichia pastoris GS115 Protein required, along with Dph2p, Kti11p, Jjj3p, and Dph5p, for synthesis of diphthamide XP_002493476.1 139138 D 644223 CDS PAS_chr4_0073 254572736 8201160 complement(140438..142852) 1 NC_012966.1 Component of the conserved oligomeric Golgi complex (Cog1p through Cog8p) 142852 8201160 PAS_chr4_0073 Pichia pastoris GS115 Component of the conserved oligomeric Golgi complex (Cog1p through Cog8p) XP_002493477.1 140438 R 644223 CDS PAS_chr4_0917 254572738 8201161 144128..145489 1 NC_012966.1 hypothetical protein 145489 8201161 PAS_chr4_0917 Pichia pastoris GS115 hypothetical protein XP_002493478.1 144128 D 644223 CDS PAS_chr4_0074 254572740 8201320 145663..146556 1 NC_012966.1 Vacuolar protein sorting protein 146556 8201320 PAS_chr4_0074 Pichia pastoris GS115 Vacuolar protein sorting protein XP_002493479.1 145663 D 644223 CDS PAS_chr4_0075 254572742 8201162 146702..147469 1 NC_012966.1 hypothetical protein 147469 8201162 PAS_chr4_0075 Pichia pastoris GS115 hypothetical protein XP_002493480.1 146702 D 644223 CDS PAS_chr4_0076 254572744 8201163 148211..151861 1 NC_012966.1 One of two (see also PSK1) PAS domain containing S/T protein kinases 151861 8201163 PAS_chr4_0076 Pichia pastoris GS115 One of two (see also PSK1) PAS domain containing S/T protein kinases XP_002493481.1 148211 D 644223 CDS PAS_chr4_0077 254572746 8201164 153020..154090 1 NC_012966.1 hypothetical protein 154090 8201164 PAS_chr4_0077 Pichia pastoris GS115 hypothetical protein XP_002493482.1 153020 D 644223 CDS PAS_chr4_0078 254572748 8201165 154235..156415 1 NC_012966.1 Essential protein with dual roles in spliceosome assembly and exocytosis 156415 8201165 PAS_chr4_0078 Pichia pastoris GS115 Essential protein with dual roles in spliceosome assembly and exocytosis XP_002493483.1 154235 D 644223 CDS PAS_chr4_0079 254572750 8201166 156566..157177 1 NC_012966.1 hypothetical protein 157177 8201166 PAS_chr4_0079 Pichia pastoris GS115 hypothetical protein XP_002493484.1 156566 D 644223 CDS PAS_chr4_0080 254572752 8201167 complement(157220..158398) 1 NC_012966.1 hypothetical protein 158398 8201167 PAS_chr4_0080 Pichia pastoris GS115 hypothetical protein XP_002493485.1 157220 R 644223 CDS PAS_chr4_0081 254572754 8201168 join(158969..158999,159049..159725) 1 NC_012966.1 Riboflavin synthase 159725 8201168 PAS_chr4_0081 Pichia pastoris GS115 Riboflavin synthase XP_002493486.1 158969 D 644223 CDS PAS_chr4_0082 254572756 8201169 complement(159759..161039) 1 NC_012966.1 Essential protein involved in a late step of 60S ribosomal subunit assembly or modification 161039 8201169 PAS_chr4_0082 Pichia pastoris GS115 Essential protein involved in a late step of 60S ribosomal subunit assembly or modification XP_002493487.1 159759 R 644223 CDS PAS_chr4_0083 254572758 8201170 161176..162534 1 NC_012966.1 Splicing factor that is found in the Cef1p subcomplex of the spliceosome 162534 8201170 PAS_chr4_0083 Pichia pastoris GS115 Splicing factor that is found in the Cef1p subcomplex of the spliceosome XP_002493488.1 161176 D 644223 CDS PAS_chr4_0084 254572760 8201171 162650..164044 1 NC_012966.1 Histone acetyltransferase catalytic subunit of the native multisubunit complex (NuA4) 164044 8201171 PAS_chr4_0084 Pichia pastoris GS115 Histone acetyltransferase catalytic subunit of the native multisubunit complex (NuA4) XP_002493489.1 162650 D 644223 CDS PAS_chr4_0085 254572762 8201172 complement(164052..165104) 1 NC_012966.1 Activator of the phosphotyrosyl phosphatase activity of PP2A,peptidyl-prolyl cis/trans-isomerase 165104 8201172 PAS_chr4_0085 Pichia pastoris GS115 Activator of the phosphotyrosyl phosphatase activity of PP2A,peptidyl-prolyl cis/trans-isomerase XP_002493490.1 164052 R 644223 CDS PAS_chr4_0918 254572764 8201173 complement(165365..165982) 1 NC_012966.1 hypothetical protein 165982 8201173 PAS_chr4_0918 Pichia pastoris GS115 hypothetical protein XP_002493491.1 165365 R 644223 CDS PAS_chr4_0086 254572766 8201321 166143..167483 1 NC_012966.1 Putative acyltransferase with similarity to Eeb1p and Eht1p 167483 8201321 PAS_chr4_0086 Pichia pastoris GS115 Putative acyltransferase with similarity to Eeb1p and Eht1p XP_002493492.1 166143 D 644223 CDS PAS_chr4_0087 254572768 8201174 complement(167525..168061) 1 NC_012966.1 Protein involved in the repair of double-strand breaks in DNA during vegetative growth 168061 8201174 PAS_chr4_0087 Pichia pastoris GS115 Protein involved in the repair of double-strand breaks in DNA during vegetative growth XP_002493493.1 167525 R 644223 CDS PAS_chr4_0088 254572770 8201175 168228..172442 1 NC_012966.1 Essential protein involved in intracellular protein transport 172442 8201175 PAS_chr4_0088 Pichia pastoris GS115 Essential protein involved in intracellular protein transport XP_002493494.1 168228 D 644223 CDS PAS_chr4_0089 254572772 8201176 complement(172466..174838) 1 NC_012966.1 hypothetical protein 174838 8201176 PAS_chr4_0089 Pichia pastoris GS115 hypothetical protein XP_002493495.1 172466 R 644223 CDS PAS_chr4_0090 254572774 8201177 175190..175936 1 NC_012966.1 Trimethyl guanosine synthase, conserved nucleolar methyl transferase 175936 8201177 PAS_chr4_0090 Pichia pastoris GS115 Trimethyl guanosine synthase, conserved nucleolar methyl transferase XP_002493496.1 175190 D 644223 CDS PAS_chr4_0091 254572776 8201178 176150..178186 1 NC_012966.1 Kinesin-related motor protein involved in mitotic spindle positioning 178186 8201178 PAS_chr4_0091 Pichia pastoris GS115 Kinesin-related motor protein involved in mitotic spindle positioning XP_002493497.1 176150 D 644223 CDS PAS_chr4_0092 254572778 8201179 complement(178200..179402) 1 NC_012966.1 Putative protein of unknown function 179402 8201179 PAS_chr4_0092 Pichia pastoris GS115 Putative protein of unknown function XP_002493498.1 178200 R 644223 CDS PAS_chr4_0093 254572780 8201180 179790..181280 1 NC_012966.1 Putative transcription factor involved in regulating the response to osmotic stress 181280 8201180 PAS_chr4_0093 Pichia pastoris GS115 Putative transcription factor involved in regulating the response to osmotic stress XP_002493499.1 179790 D 644223 CDS PAS_chr4_0094 254572782 8201181 join(181624..181629,181720..182424) 1 NC_012966.1 Protein component of the small (40S) ribosomal subunit 182424 8201181 PAS_chr4_0094 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002493500.1 181624 D 644223 CDS PAS_chr4_0095 254572784 8201182 complement(182486..183859) 1 NC_012966.1 Subunit of the SF3a splicing factor complex, required for spliceosome assembly 183859 8201182 PAS_chr4_0095 Pichia pastoris GS115 Subunit of the SF3a splicing factor complex, required for spliceosome assembly XP_002493501.1 182486 R 644223 CDS PAS_chr4_0096 254572786 8201183 184690..185937 1 NC_012966.1 hypothetical protein 185937 8201183 PAS_chr4_0096 Pichia pastoris GS115 hypothetical protein XP_002493502.1 184690 D 644223 CDS PAS_chr4_0098 254572788 8201184 194369..196039 1 NC_012966.1 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA 196039 8201184 PAS_chr4_0098 Pichia pastoris GS115 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA XP_002493503.1 194369 D 644223 CDS PAS_chr4_0099 254572790 8201185 complement(196053..197267) 1 NC_012966.1 hypothetical protein 197267 8201185 PAS_chr4_0099 Pichia pastoris GS115 hypothetical protein XP_002493504.1 196053 R 644223 CDS PAS_chr4_0100 254572792 8201186 complement(197500..199758) 1 NC_012966.1 Component of NuA4, which is an essential histone H4/H2A acetyltransferase complex 199758 8201186 PAS_chr4_0100 Pichia pastoris GS115 Component of NuA4, which is an essential histone H4/H2A acetyltransferase complex XP_002493505.1 197500 R 644223 CDS PAS_chr4_0101 254572794 8201187 complement(200502..202499) 1 NC_012966.1 Mitochondrial aspartyl-tRNA synthetase, required for acylation of aspartyl-tRNA 202499 8201187 PAS_chr4_0101 Pichia pastoris GS115 Mitochondrial aspartyl-tRNA synthetase, required for acylation of aspartyl-tRNA XP_002493506.1 200502 R 644223 CDS PAS_chr4_0102 254572796 8201188 join(202831..203032,203317..204344) 1 NC_012966.1 Nuclear protein required for transcription of MXR1 204344 8201188 PAS_chr4_0102 Pichia pastoris GS115 Nuclear protein required for transcription of MXR1 XP_002493507.1 202831 D 644223 CDS PAS_chr4_0103 254572798 8201189 204607..205722 1 NC_012966.1 Subunit of Golgi mannosyltransferase complex also containing Anp1p, Mnn10p, Mnn11p, and Hoc1p 205722 8201189 PAS_chr4_0103 Pichia pastoris GS115 Subunit of Golgi mannosyltransferase complex also containing Anp1p, Mnn10p, Mnn11p, and Hoc1p XP_002493508.1 204607 D 644223 CDS PAS_chr4_0104 254572800 8201191 205921..207027 1 NC_012966.1 Zinc-finger protein of unknown function 207027 8201191 PAS_chr4_0104 Pichia pastoris GS115 Zinc-finger protein of unknown function XP_002493509.1 205921 D 644223 CDS PAS_chr4_0105 254572802 8201192 complement(207127..209034) 1 NC_012966.1 Putative GTPase that associates with free 60S ribosomal subunits in the nucleolus 209034 8201192 PAS_chr4_0105 Pichia pastoris GS115 Putative GTPase that associates with free 60S ribosomal subunits in the nucleolus XP_002493510.1 207127 R 644223 CDS PAS_chr4_0106 254572804 8201193 join(209322..209450,209503..209613,209666..209875) 1 NC_012966.1 hypothetical protein 209875 8201193 PAS_chr4_0106 Pichia pastoris GS115 hypothetical protein XP_002493511.1 209322 D 644223 CDS PAS_chr4_0107 254572806 8201194 complement(210135..210899) 1 NC_012966.1 Protein component of the large (60S) ribosomal subunit 210899 8201194 PAS_chr4_0107 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit XP_002493512.1 210135 R 644223 CDS PAS_chr4_0108 254572808 8201195 complement(211367..213139) 1 NC_012966.1 hypothetical protein 213139 8201195 PAS_chr4_0108 Pichia pastoris GS115 hypothetical protein XP_002493513.1 211367 R 644223 CDS PAS_chr4_0109 254572810 8201196 join(213500..215393,215498..217005) 1 NC_012966.1 Component of the condensin complex, essential SMC chromosomal ATPase family member 217005 8201196 PAS_chr4_0109 Pichia pastoris GS115 Component of the condensin complex, essential SMC chromosomal ATPase family member XP_002493514.1 213500 D 644223 CDS PAS_chr4_0111 254572812 8201197 complement(216985..218613) 1 NC_012966.1 Low affinity methionine permease, similar to Mup1p 218613 8201197 PAS_chr4_0111 Pichia pastoris GS115 Low affinity methionine permease, similar to Mup1p XP_002493515.1 216985 R 644223 CDS PAS_chr4_0112 254572814 8201198 219604..220722 1 NC_012966.1 Threonine aldolase 220722 8201198 PAS_chr4_0112 Pichia pastoris GS115 Threonine aldolase XP_002493516.1 219604 D 644223 CDS PAS_chr4_0113 254572816 8201199 221077..223980 1 NC_012966.1 Protein that associates with ribosomes 223980 8201199 PAS_chr4_0113 Pichia pastoris GS115 Protein that associates with ribosomes XP_002493517.1 221077 D 644223 CDS PAS_chr4_0114 254572818 8201200 complement(224038..224607) 1 NC_012966.1 hypothetical protein 224607 8201200 PAS_chr4_0114 Pichia pastoris GS115 hypothetical protein XP_002493518.1 224038 R 644223 CDS PAS_chr4_0919 254572820 8201201 complement(224612..225289) 1 NC_012966.1 hypothetical protein 225289 8201201 PAS_chr4_0919 Pichia pastoris GS115 hypothetical protein XP_002493519.1 224612 R 644223 CDS PAS_chr4_0115 254572822 8201322 join(225640..225657,225714..226181) 1 NC_012966.1 Minor isoform of tropomyosin, binds to and stabilizes actin cables and filaments 226181 8201322 PAS_chr4_0115 Pichia pastoris GS115 Minor isoform of tropomyosin, binds to and stabilizes actin cables and filaments XP_002493520.1 225640 D 644223 CDS PAS_chr4_0116 254572824 8201202 226458..227300 1 NC_012966.1 Protein involved in N-glycosylation 227300 8201202 PAS_chr4_0116 Pichia pastoris GS115 Protein involved in N-glycosylation XP_002493521.1 226458 D 644223 CDS PAS_chr4_0117 254572826 8201203 227442..228101 1 NC_012966.1 hypothetical protein 228101 8201203 PAS_chr4_0117 Pichia pastoris GS115 hypothetical protein XP_002493522.1 227442 D 644223 CDS PAS_chr4_0118 254572828 8201204 complement(228154..231180) 1 NC_012966.1 DNA repair and TFIIH regulator 231180 8201204 PAS_chr4_0118 Pichia pastoris GS115 DNA repair and TFIIH regulator XP_002493523.1 228154 R 644223 CDS PAS_chr4_0119 254572830 8201205 join(231393..238718,238765..239202) 1 NC_012966.1 Protein involved in cell morphogenesis and proliferation, associated with protein kinase Cbk1p 239202 8201205 PAS_chr4_0119 Pichia pastoris GS115 Protein involved in cell morphogenesis and proliferation, associated with protein kinase Cbk1p XP_002493524.1 231393 D 644223 CDS PAS_chr4_0920 254572832 8201032 239379..240560 1 NC_012966.1 hypothetical protein 240560 8201032 PAS_chr4_0920 Pichia pastoris GS115 hypothetical protein XP_002493525.1 239379 D 644223 CDS PAS_chr4_0120 254572834 8200953 complement(240623..241492) 1 NC_012966.1 hypothetical protein 241492 8200953 PAS_chr4_0120 Pichia pastoris GS115 hypothetical protein XP_002493526.1 240623 R 644223 CDS PAS_chr4_0121 254572836 8201033 complement(241651..243228) 1 NC_012966.1 Subunit beta of the cytosolic chaperonin Cct ring complex, related to Tcp1p 243228 8201033 PAS_chr4_0121 Pichia pastoris GS115 Subunit beta of the cytosolic chaperonin Cct ring complex, related to Tcp1p XP_002493527.1 241651 R 644223 CDS PAS_chr4_0122 254572838 8201034 join(243693..244307,244405..245247) 1 NC_012966.1 Probable transporter, member of the Ca2+-binding subfamily of the mitochondrial carrier family 245247 8201034 PAS_chr4_0122 Pichia pastoris GS115 Probable transporter, member of the Ca2+-binding subfamily of the mitochondrial carrier family XP_002493528.1 243693 D 644223 CDS PAS_chr4_0123 254572840 8201035 complement(245393..246457) 1 NC_012966.1 Receptor for alpha-factor pheromone 246457 8201035 PAS_chr4_0123 Pichia pastoris GS115 Receptor for alpha-factor pheromone XP_002493529.1 245393 R 644223 CDS PAS_chr4_0124 254572842 8201036 complement(247340..250051) 1 NC_012966.1 ATP-binding protein required for mismatch repair in mitosis and meiosis 250051 8201036 PAS_chr4_0124 Pichia pastoris GS115 ATP-binding protein required for mismatch repair in mitosis and meiosis XP_002493530.1 247340 R 644223 CDS PAS_chr4_0125 254572844 8201037 250208..250918 1 NC_012966.1 hypothetical protein 250918 8201037 PAS_chr4_0125 Pichia pastoris GS115 hypothetical protein XP_002493531.1 250208 D 644223 CDS PAS_chr4_0126 254572846 8201038 251046..252845 1 NC_012966.1 hypothetical protein 252845 8201038 PAS_chr4_0126 Pichia pastoris GS115 hypothetical protein XP_002493532.1 251046 D 644223 CDS PAS_chr4_0127 254572848 8201039 complement(252850..254424) 1 NC_012966.1 RNAase III 254424 8201039 PAS_chr4_0127 Pichia pastoris GS115 RNAase III XP_002493533.1 252850 R 644223 CDS PAS_chr4_0128 254572850 8201040 complement(join(254541..257186,257276..257581)) 1 NC_012966.1 Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes 257581 8201040 PAS_chr4_0128 Pichia pastoris GS115 Member of the imitation-switch (ISWI) class of ATP-dependent chromatin remodeling complexes XP_002493534.1 254541 R 644223 CDS PAS_chr4_0129 254572852 8201041 257962..258660 1 NC_012966.1 hypothetical protein 258660 8201041 PAS_chr4_0129 Pichia pastoris GS115 hypothetical protein XP_002493535.1 257962 D 644223 CDS PAS_chr4_0130 254572854 8201042 complement(259018..260328) 1 NC_012966.1 Putative protein of unknown function 260328 8201042 PAS_chr4_0130 Pichia pastoris GS115 Putative protein of unknown function XP_002493536.1 259018 R 644223 CDS PAS_chr4_0131 254572856 8201043 complement(260659..261162) 1 NC_012966.1 Protein component of the large (60S) ribosomal subunit 261162 8201043 PAS_chr4_0131 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit XP_002493537.1 260659 R 644223 CDS PAS_chr4_0132 254572858 8201044 complement(261350..263251) 1 NC_012966.1 Putative protein of unknown function 263251 8201044 PAS_chr4_0132 Pichia pastoris GS115 Putative protein of unknown function XP_002493538.1 261350 R 644223 CDS PAS_chr4_0133 254572860 8201045 263367..264146 1 NC_012966.1 hypothetical protein 264146 8201045 PAS_chr4_0133 Pichia pastoris GS115 hypothetical protein XP_002493539.1 263367 D 644223 CDS PAS_chr4_0134 254572862 8201046 complement(264165..266225) 1 NC_012966.1 Sm-like protein involved in docking and fusion of exocytic vesicles 266225 8201046 PAS_chr4_0134 Pichia pastoris GS115 Sm-like protein involved in docking and fusion of exocytic vesicles XP_002493540.1 264165 R 644223 CDS PAS_chr4_0136 254572864 8201047 268879..270042 1 NC_012966.1 Subunit of the histone deacetylase Rpd3L complex 270042 8201047 PAS_chr4_0136 Pichia pastoris GS115 Subunit of the histone deacetylase Rpd3L complex XP_002493541.1 268879 D 644223 CDS PAS_chr4_0137 254572866 8201048 complement(join(270109..271346,271420..272389)) 1 NC_012966.1 Putative tubulin tyrosine ligase associated with P-bodies 272389 8201048 PAS_chr4_0137 Pichia pastoris GS115 Putative tubulin tyrosine ligase associated with P-bodies XP_002493542.1 270109 R 644223 CDS PAS_chr4_0138 254572868 8201049 complement(272556..273818) 1 NC_012966.1 Small subunit of carbamoyl phosphate synthetase 273818 8201049 PAS_chr4_0138 Pichia pastoris GS115 Small subunit of carbamoyl phosphate synthetase XP_002493543.1 272556 R 644223 CDS PAS_chr4_0139 254572870 8201050 274513..275679 1 NC_012966.1 Protein component of the large (60S) ribosomal subunit 275679 8201050 PAS_chr4_0139 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit XP_002493544.1 274513 D 644223 CDS PAS_chr4_0140 254572872 8201051 complement(276239..278059) 1 NC_012966.1 ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase 278059 8201051 PAS_chr4_0140 Pichia pastoris GS115 ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase XP_002493545.1 276239 R 644223 CDS PAS_chr4_0141 254572874 8201052 278573..279709 1 NC_012966.1 RNA binding protein, component of the U1 snRNP protein 279709 8201052 PAS_chr4_0141 Pichia pastoris GS115 RNA binding protein, component of the U1 snRNP protein XP_002493546.1 278573 D 644223 CDS PAS_chr4_0142 254572876 8201053 complement(279768..280238) 1 NC_012966.1 hypothetical protein 280238 8201053 PAS_chr4_0142 Pichia pastoris GS115 hypothetical protein XP_002493547.1 279768 R 644223 CDS PAS_chr4_0143 254572878 8201054 280513..285264 1 NC_012966.1 Swi2/Snf2-related ATPase that is the structural component of the SWR1 complex 285264 8201054 PAS_chr4_0143 Pichia pastoris GS115 Swi2/Snf2-related ATPase that is the structural component of the SWR1 complex XP_002493548.1 280513 D 644223 CDS PAS_chr4_0145 254572880 8201055 288180..288653 1 NC_012966.1 hypothetical protein 288653 8201055 PAS_chr4_0145 Pichia pastoris GS115 hypothetical protein XP_002493549.1 288180 D 644223 CDS PAS_chr4_0146 254572882 8201056 complement(288643..289896) 1 NC_012966.1 hypothetical protein 289896 8201056 PAS_chr4_0146 Pichia pastoris GS115 hypothetical protein XP_002493550.1 288643 R 644223 CDS PAS_chr4_0147 254572884 8201057 complement(290121..291509) 1 NC_012966.1 Aromatic aminotransferase II 291509 8201057 PAS_chr4_0147 Pichia pastoris GS115 Aromatic aminotransferase II XP_002493551.1 290121 R 644223 CDS PAS_chr4_0148 254572886 8201058 complement(join(291782..293118,293173..293203)) 1 NC_012966.1 Gamma-tubulin 293203 8201058 PAS_chr4_0148 Pichia pastoris GS115 Gamma-tubulin XP_002493552.1 291782 R 644223 CDS PAS_chr4_0149 254572888 8201059 293884..294717 1 NC_012966.1 Microsomal cytochrome b reductase 294717 8201059 PAS_chr4_0149 Pichia pastoris GS115 Microsomal cytochrome b reductase XP_002493553.1 293884 D 644223 CDS PAS_chr4_0150 254572890 8201060 complement(294770..296329) 1 NC_012966.1 Aspartate kinase (L-aspartate 4-P-transferase) 296329 8201060 PAS_chr4_0150 Pichia pastoris GS115 Aspartate kinase (L-aspartate 4-P-transferase) XP_002493554.1 294770 R 644223 CDS PAS_chr4_0151 254572892 8201061 297655..298884 1 NC_012966.1 hypothetical protein 298884 8201061 PAS_chr4_0151 Pichia pastoris GS115 hypothetical protein XP_002493555.1 297655 D 644223 CDS PAS_chr4_0152 254572894 8201062 301802..303793 1 NC_012966.1 hypothetical protein 303793 8201062 PAS_chr4_0152 Pichia pastoris GS115 hypothetical protein XP_002493556.1 301802 D 644223 CDS PAS_chr4_0153 254572896 8201063 complement(303928..305829) 1 NC_012966.1 Phospholipase B (lysophospholipase) involved in phospholipid metabolism 305829 8201063 PAS_chr4_0153 Pichia pastoris GS115 Phospholipase B (lysophospholipase) involved in phospholipid metabolism XP_002493557.1 303928 R 644223 CDS PAS_chr4_0154 254572898 8201064 306052..307500 1 NC_012966.1 hypothetical protein 307500 8201064 PAS_chr4_0154 Pichia pastoris GS115 hypothetical protein XP_002493558.1 306052 D 644223 CDS PAS_chr4_0155 254572900 8201065 complement(join(307555..308088,308145..308204)) 1 NC_012966.1 hypothetical protein 308204 8201065 PAS_chr4_0155 Pichia pastoris GS115 hypothetical protein XP_002493559.1 307555 R 644223 CDS PAS_chr4_0156 254572902 8201066 308462..310048 1 NC_012966.1 Ubiquitin-protein ligase 310048 8201066 PAS_chr4_0156 Pichia pastoris GS115 Ubiquitin-protein ligase XP_002493560.1 308462 D 644223 CDS PAS_chr4_0157 254572904 8201067 complement(310128..310526) 1 NC_012966.1 Histone variant H2AZ, exchanged for histone H2A in nucleosomes by the SWR1 complex 310526 8201067 PAS_chr4_0157 Pichia pastoris GS115 Histone variant H2AZ, exchanged for histone H2A in nucleosomes by the SWR1 complex XP_002493561.1 310128 R 644223 CDS PAS_chr4_0158 254572906 8201068 complement(310770..312485) 1 NC_012966.1 Tetradecameric mitochondrial chaperonin 312485 8201068 PAS_chr4_0158 Pichia pastoris GS115 Tetradecameric mitochondrial chaperonin XP_002493562.1 310770 R 644223 CDS PAS_chr4_0159 254572908 8201069 313109..314848 1 NC_012966.1 Protein with a possible role in regulating expression of nitrogen permeases 314848 8201069 PAS_chr4_0159 Pichia pastoris GS115 Protein with a possible role in regulating expression of nitrogen permeases XP_002493563.1 313109 D 644223 CDS PAS_chr4_0160 254572910 8201070 314964..317705 1 NC_012966.1 Kinesin-related motor protein required for mitotic spindle assembly and chromosome segregation 317705 8201070 PAS_chr4_0160 Pichia pastoris GS115 Kinesin-related motor protein required for mitotic spindle assembly and chromosome segregation XP_002493564.1 314964 D 644223 CDS PAS_chr4_0161 254572912 8201071 317908..318405 1 NC_012966.1 hypothetical protein 318405 8201071 PAS_chr4_0161 Pichia pastoris GS115 hypothetical protein XP_002493565.1 317908 D 644223 CDS PAS_chr4_0162 254572914 8201072 318854..319762 1 NC_012966.1 hypothetical protein 319762 8201072 PAS_chr4_0162 Pichia pastoris GS115 hypothetical protein XP_002493566.1 318854 D 644223 CDS PAS_chr4_0921 254572916 8201073 complement(319821..322067) 1 NC_012966.1 hypothetical protein 322067 8201073 PAS_chr4_0921 Pichia pastoris GS115 hypothetical protein XP_002493567.1 319821 R 644223 CDS PAS_chr4_0163 254572918 8200954 complement(322193..326464) 1 NC_012966.1 Abundant subunit of the nuclear pore complex (NPC) 326464 8200954 PAS_chr4_0163 Pichia pastoris GS115 Abundant subunit of the nuclear pore complex (NPC) XP_002493568.1 322193 R 644223 CDS PAS_chr4_0164 254572920 8201074 join(327770..327797,327861..328024) 1 NC_012966.1 hypothetical protein 328024 8201074 PAS_chr4_0164 Pichia pastoris GS115 hypothetical protein XP_002493569.1 327770 D 644223 CDS PAS_chr4_0165 254572922 8201075 join(328243..328288,328340..328905) 1 NC_012966.1 GTPase, Ras-like GTP binding protein involved in the secretory pathway 328905 8201075 PAS_chr4_0165 Pichia pastoris GS115 GTPase, Ras-like GTP binding protein involved in the secretory pathway XP_002493570.1 328243 D 644223 CDS PAS_chr4_0166 254572924 8201076 329619..330962 1 NC_012966.1 Putative transcription factor containing a C2H2 zinc finger 330962 8201076 PAS_chr4_0166 Pichia pastoris GS115 Putative transcription factor containing a C2H2 zinc finger XP_002493571.1 329619 D 644223 CDS PAS_chr4_0167 254572926 8201077 331174..334809 1 NC_012966.1 UDP-glucose:sterol glucosyltransferase (Sterol 3-beta-glucosyltransferase) 334809 8201077 PAS_chr4_0167 Pichia pastoris GS115 UDP-glucose:sterol glucosyltransferase (Sterol 3-beta-glucosyltransferase) XP_002493572.1 331174 D 644223 CDS PAS_chr4_0169 254572928 8201078 340774..341892 1 NC_012966.1 Transcription factor that controls expression of many ribosome biogenesis genes 341892 8201078 PAS_chr4_0169 Pichia pastoris GS115 Transcription factor that controls expression of many ribosome biogenesis genes XP_002493573.1 340774 D 644223 CDS PAS_chr4_0170 254572930 8201079 342202..343302 1 NC_012966.1 hypothetical protein 343302 8201079 PAS_chr4_0170 Pichia pastoris GS115 hypothetical protein XP_002493574.1 342202 D 644223 CDS PAS_chr4_0171 254572932 8201080 complement(343318..346443) 1 NC_012966.1 hypothetical protein 346443 8201080 PAS_chr4_0171 Pichia pastoris GS115 hypothetical protein XP_002493575.1 343318 R 644223 CDS PAS_chr4_0172 254572934 8201081 347453..349576 1 NC_012966.1 E3 ubiquitin ligase for Rad6p 349576 8201081 PAS_chr4_0172 Pichia pastoris GS115 E3 ubiquitin ligase for Rad6p XP_002493576.1 347453 D 644223 CDS PAS_chr4_0173 254572936 8201082 350142..355640 1 NC_012966.1 Urea amidolyase, contains both urea carboxylase and allophanate hydrolase activities 355640 8201082 PAS_chr4_0173 Pichia pastoris GS115 Urea amidolyase, contains both urea carboxylase and allophanate hydrolase activities XP_002493577.1 350142 D 644223 CDS PAS_chr4_0174 254572938 8201083 complement(355765..357804) 1 NC_012966.1 Deubiquitinating enzyme anchored to the outer mitochondrial membrane 357804 8201083 PAS_chr4_0174 Pichia pastoris GS115 Deubiquitinating enzyme anchored to the outer mitochondrial membrane XP_002493578.1 355765 R 644223 CDS PAS_chr4_0175 254572940 8201084 358800..359249 1 NC_012966.1 Putative protein of unknown function 359249 8201084 PAS_chr4_0175 Pichia pastoris GS115 Putative protein of unknown function XP_002493579.1 358800 D 644223 CDS PAS_chr4_0176 254572942 8201085 complement(359276..361171) 1 NC_012966.1 hypothetical protein 361171 8201085 PAS_chr4_0176 Pichia pastoris GS115 hypothetical protein XP_002493580.1 359276 R 644223 CDS PAS_chr4_0922 254572944 8201086 361651..362400 1 NC_012966.1 hypothetical protein 362400 8201086 PAS_chr4_0922 Pichia pastoris GS115 hypothetical protein XP_002493581.1 361651 D 644223 CDS PAS_chr4_0177 254572946 8200955 362730..364325 1 NC_012966.1 Non-essential protein of unknown function 364325 8200955 PAS_chr4_0177 Pichia pastoris GS115 Non-essential protein of unknown function XP_002493582.1 362730 D 644223 CDS PAS_chr4_0178 254572948 8201087 complement(364322..366178) 1 NC_012966.1 Dihydrouridine synthase 366178 8201087 PAS_chr4_0178 Pichia pastoris GS115 Dihydrouridine synthase XP_002493583.1 364322 R 644223 CDS PAS_chr4_0179 254572950 8201088 366405..367463 1 NC_012966.1 Dihydrouridine synthase 367463 8201088 PAS_chr4_0179 Pichia pastoris GS115 Dihydrouridine synthase XP_002493584.1 366405 D 644223 CDS PAS_chr4_0180 254572952 8201089 complement(368091..368444) 1 NC_012966.1 Protein component of the large (60S) ribosomal subunit 368444 8201089 PAS_chr4_0180 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit XP_002493585.1 368091 R 644223 CDS PAS_chr4_0923 254572954 8201090 368758..369762 1 NC_012966.1 hypothetical protein 369762 8201090 PAS_chr4_0923 Pichia pastoris GS115 hypothetical protein XP_002493586.1 368758 D 644223 CDS PAS_chr4_0181 254572956 8200956 370136..370819 1 NC_012966.1 High-affinity copper transporter of the plasma membrane 370819 8200956 PAS_chr4_0181 Pichia pastoris GS115 High-affinity copper transporter of the plasma membrane XP_002493587.1 370136 D 644223 CDS PAS_chr4_0182 254572958 8201091 complement(370916..371920) 1 NC_012966.1 BAR domain-containing protein that localizes to both early and late Golgi vesicles 371920 8201091 PAS_chr4_0182 Pichia pastoris GS115 BAR domain-containing protein that localizes to both early and late Golgi vesicles XP_002493588.1 370916 R 644223 CDS PAS_chr4_0184 254572960 8201092 complement(374727..376580) 1 NC_012966.1 hypothetical protein 376580 8201092 PAS_chr4_0184 Pichia pastoris GS115 hypothetical protein XP_002493589.1 374727 R 644223 CDS PAS_chr4_0185 254572962 8201093 complement(377454..378542) 1 NC_012966.1 Nucleolar protein that binds nuclear localization sequences 378542 8201093 PAS_chr4_0185 Pichia pastoris GS115 Nucleolar protein that binds nuclear localization sequences XP_002493590.1 377454 R 644223 CDS PAS_chr4_0186 254572964 8201094 complement(378776..382834) 1 NC_012966.1 Plasma membrane ATP-binding cassette (ABC) transporter 382834 8201094 PAS_chr4_0186 Pichia pastoris GS115 Plasma membrane ATP-binding cassette (ABC) transporter XP_002493591.1 378776 R 644223 CDS PAS_chr4_0188 254572966 8201095 384342..388298 1 NC_012966.1 Plasma membrane ATP-binding cassette (ABC) transporter 388298 8201095 PAS_chr4_0188 Pichia pastoris GS115 Plasma membrane ATP-binding cassette (ABC) transporter XP_002493592.1 384342 D 644223 CDS PAS_chr4_0189 254572968 8201096 complement(388441..389394) 1 NC_012966.1 Cyclin-like protein that interacts with Pho85p 389394 8201096 PAS_chr4_0189 Pichia pastoris GS115 Cyclin-like protein that interacts with Pho85p XP_002493593.1 388441 R 644223 CDS PAS_chr4_0190 254572970 8201097 390380..391303 1 NC_012966.1 hypothetical protein 391303 8201097 PAS_chr4_0190 Pichia pastoris GS115 hypothetical protein XP_002493594.1 390380 D 644223 CDS PAS_chr4_0191 254572972 8201098 complement(391316..393061) 1 NC_012966.1 Malate synthase 393061 8201098 PAS_chr4_0191 Pichia pastoris GS115 Malate synthase XP_002493595.1 391316 R 644223 CDS PAS_chr4_0192 254572974 8201099 complement(393652..395157) 1 NC_012966.1 Flavin-containing monooxygenase 395157 8201099 PAS_chr4_0192 Pichia pastoris GS115 Flavin-containing monooxygenase XP_002493596.1 393652 R 644223 CDS PAS_chr4_0193 254572976 8201100 complement(395886..396785) 1 NC_012966.1 hypothetical protein 396785 8201100 PAS_chr4_0193 Pichia pastoris GS115 hypothetical protein XP_002493597.1 395886 R 644223 CDS PAS_chr4_0194 254572978 8201101 397051..399768 1 NC_012966.1 Catalytic subunit of the Dcp1p-Dcp2p decapping enzyme complex 399768 8201101 PAS_chr4_0194 Pichia pastoris GS115 Catalytic subunit of the Dcp1p-Dcp2p decapping enzyme complex XP_002493598.1 397051 D 644223 CDS PAS_chr4_0195 254572980 8201102 400432..401670 1 NC_012966.1 Essential serine kinase involved in the processing of the 20S pre-rRNA into mature 18S rRNA 401670 8201102 PAS_chr4_0195 Pichia pastoris GS115 Essential serine kinase involved in the processing of the 20S pre-rRNA into mature 18S rRNA XP_002493599.1 400432 D 644223 CDS PAS_chr4_0924 254572982 8201103 401967..402296 1 NC_012966.1 hypothetical protein 402296 8201103 PAS_chr4_0924 Pichia pastoris GS115 hypothetical protein XP_002493600.1 401967 D 644223 CDS PAS_chr4_0196 254572984 8200957 complement(402351..403886) 1 NC_012966.1 Folylpolyglutamate synthetase, catalyzes extension of the glutamate chains of the folate coenzymes 403886 8200957 PAS_chr4_0196 Pichia pastoris GS115 Folylpolyglutamate synthetase, catalyzes extension of the glutamate chains of the folate coenzymes XP_002493601.1 402351 R 644223 CDS PAS_chr4_0197 254572986 8201104 complement(404230..405432) 1 NC_012966.1 Small subunit of the ribonucleotide-diphosphate reductase (RNR) complex 405432 8201104 PAS_chr4_0197 Pichia pastoris GS115 Small subunit of the ribonucleotide-diphosphate reductase (RNR) complex XP_002493602.1 404230 R 644223 CDS PAS_chr4_0198 254572988 8201105 complement(join(405823..406056,406092..406475)) 1 NC_012966.1 C-8 sterol isomerase 406475 8201105 PAS_chr4_0198 Pichia pastoris GS115 C-8 sterol isomerase XP_002493603.1 405823 R 644223 CDS PAS_chr4_0200 254572990 8201106 406766..408994 1 NC_012966.1 Cytoplasmic component of the nuclear aminoacylation-dependent tRNA export pathway 408994 8201106 PAS_chr4_0200 Pichia pastoris GS115 Cytoplasmic component of the nuclear aminoacylation-dependent tRNA export pathway XP_002493604.1 406766 D 644223 CDS PAS_chr4_0201 254572992 8201107 complement(join(409081..409460,409901..411134)) 1 NC_012966.1 Essential ATP-dependent RNA helicase of the DEAD-box protein family 411134 8201107 PAS_chr4_0201 Pichia pastoris GS115 Essential ATP-dependent RNA helicase of the DEAD-box protein family XP_002493605.1 409081 R 644223 CDS PAS_chr4_0925 254572994 8201108 complement(411421..411831) 1 NC_012966.1 hypothetical protein 411831 8201108 PAS_chr4_0925 Pichia pastoris GS115 hypothetical protein XP_002493606.1 411421 R 644223 CDS PAS_chr4_0202 254572996 8200958 412344..414689 1 NC_012966.1 Zinc-finger transcription factor 414689 8200958 PAS_chr4_0202 Pichia pastoris GS115 Zinc-finger transcription factor XP_002493607.1 412344 D 644223 CDS PAS_chr4_0203 254572998 8201109 complement(414815..417784) 1 NC_012966.1 Proposed transcriptional activator, member of the Gal4p family of zinc cluster proteins 417784 8201109 PAS_chr4_0203 Pichia pastoris GS115 Proposed transcriptional activator, member of the Gal4p family of zinc cluster proteins XP_002493608.1 414815 R 644223 CDS PAS_chr4_0204 254573000 8201110 418396..419346 1 NC_012966.1 Subunit of TFIIH and nucleotide excision repair factor 3 complexes 419346 8201110 PAS_chr4_0204 Pichia pastoris GS115 Subunit of TFIIH and nucleotide excision repair factor 3 complexes XP_002493609.1 418396 D 644223 CDS PAS_chr4_0205 254573002 8200877 419632..421419 1 NC_012966.1 Forkhead family transcription factor with a major role in the expression of G2/M phase genes 421419 8200877 PAS_chr4_0205 Pichia pastoris GS115 Forkhead family transcription factor with a major role in the expression of G2/M phase genes XP_002493610.1 419632 D 644223 CDS PAS_chr4_0206 254573004 8200878 421685..422362 1 NC_012966.1 hypothetical protein 422362 8200878 PAS_chr4_0206 Pichia pastoris GS115 hypothetical protein XP_002493611.1 421685 D 644223 CDS PAS_chr4_0207 254573006 8200879 join(422754..423075,423128..423426) 1 NC_012966.1 hypothetical protein 423426 8200879 PAS_chr4_0207 Pichia pastoris GS115 hypothetical protein XP_002493612.1 422754 D 644223 CDS PAS_chr4_0208 254573008 8200880 423661..424260 1 NC_012966.1 N-terminally acetylated protein component of the large (60S) ribosomal subunit, binds to 5.8 S rRNA 424260 8200880 PAS_chr4_0208 Pichia pastoris GS115 N-terminally acetylated protein component of the large (60S) ribosomal subunit, binds to 5.8 S rRNA XP_002493613.1 423661 D 644223 CDS PAS_chr4_0210 254573010 8200881 425013..425927 1 NC_012966.1 Major ADP/ATP carrier of the mitochondrial inner membrane 425927 8200881 PAS_chr4_0210 Pichia pastoris GS115 Major ADP/ATP carrier of the mitochondrial inner membrane XP_002493614.1 425013 D 644223 CDS PAS_chr4_0926 254573012 8200882 426175..427137 1 NC_012966.1 hypothetical protein 427137 8200882 PAS_chr4_0926 Pichia pastoris GS115 hypothetical protein XP_002493615.1 426175 D 644223 CDS PAS_chr4_0211 254573014 8200959 complement(427251..427817) 1 NC_012966.1 Protein component of the small (40S) ribosomal subunit, nearly identical to Rps7Bp 427817 8200959 PAS_chr4_0211 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit, nearly identical to Rps7Bp XP_002493616.1 427251 R 644223 CDS PAS_chr4_0212 254573016 8200883 join(428135..428297,428383..428873) 1 NC_012966.1 Ribose-5-phosphate ketol-isomerase 428873 8200883 PAS_chr4_0212 Pichia pastoris GS115 Ribose-5-phosphate ketol-isomerase XP_002493617.1 428135 D 644223 CDS PAS_chr4_0213 254573018 8200884 428999..429757 1 NC_012966.1 Ribose-5-phosphate ketol-isomerase 429757 8200884 PAS_chr4_0213 Pichia pastoris GS115 Ribose-5-phosphate ketol-isomerase XP_002493618.1 428999 D 644223 CDS PAS_chr4_0214 254573020 8200885 complement(join(429843..430288,430338..430380)) 1 NC_012966.1 Glucose-repressible ADP-ribosylation factor 430380 8200885 PAS_chr4_0214 Pichia pastoris GS115 Glucose-repressible ADP-ribosylation factor XP_002493619.1 429843 R 644223 CDS PAS_chr4_0215 254573022 8200886 complement(430621..432444) 1 NC_012966.1 SH3 domain protein implicated in the regulation of actin polymerization 432444 8200886 PAS_chr4_0215 Pichia pastoris GS115 SH3 domain protein implicated in the regulation of actin polymerization XP_002493620.1 430621 R 644223 CDS PAS_chr4_0216 254573024 8200887 432869..434434 1 NC_012966.1 Non-essential protein of unknown function 434434 8200887 PAS_chr4_0216 Pichia pastoris GS115 Non-essential protein of unknown function XP_002493621.1 432869 D 644223 CDS PAS_chr4_0927 254573026 8200888 434760..436598 1 NC_012966.1 hypothetical protein 436598 8200888 PAS_chr4_0927 Pichia pastoris GS115 hypothetical protein XP_002493622.1 434760 D 644223 CDS PAS_chr4_0217 254573028 8200960 complement(436629..437732) 1 NC_012966.1 Protein of unknown function that associates with ribosomes 437732 8200960 PAS_chr4_0217 Pichia pastoris GS115 Protein of unknown function that associates with ribosomes XP_002493623.1 436629 R 644223 CDS PAS_chr4_0218 254573030 8200889 437965..439770 1 NC_012966.1 Mitochondrial type 2C protein phosphatase involved in regulation of pyruvate dehydrogenase activity 439770 8200889 PAS_chr4_0218 Pichia pastoris GS115 Mitochondrial type 2C protein phosphatase involved in regulation of pyruvate dehydrogenase activity XP_002493624.1 437965 D 644223 CDS PAS_chr4_0219 254573032 8200890 complement(439861..440517) 1 NC_012966.1 GTPase required for transport during endocytosis and for correct sorting of vacuolar hydrolases 440517 8200890 PAS_chr4_0219 Pichia pastoris GS115 GTPase required for transport during endocytosis and for correct sorting of vacuolar hydrolases XP_002493625.1 439861 R 644223 CDS PAS_chr4_0928 254573034 8200891 complement(440719..441906) 1 NC_012966.1 hypothetical protein 441906 8200891 PAS_chr4_0928 Pichia pastoris GS115 hypothetical protein XP_002493626.1 440719 R 644223 CDS PAS_chr4_0220 254573036 8200961 complement(442058..443992) 1 NC_012966.1 Vacuolar cation channel 443992 8200961 PAS_chr4_0220 Pichia pastoris GS115 Vacuolar cation channel XP_002493627.1 442058 R 644223 CDS PAS_chr4_0221 254573038 8200892 444331..447063 1 NC_012966.1 hypothetical protein 447063 8200892 PAS_chr4_0221 Pichia pastoris GS115 hypothetical protein XP_002493628.1 444331 D 644223 CDS PAS_chr4_0222 254573040 8200893 447320..447907 1 NC_012966.1 Non-essential small GTPase of the Rho/Rac subfamily of Ras-like proteins 447907 8200893 PAS_chr4_0222 Pichia pastoris GS115 Non-essential small GTPase of the Rho/Rac subfamily of Ras-like proteins XP_002493629.1 447320 D 644223 CDS PAS_chr4_0223 254573042 8200894 448041..450686 1 NC_012966.1 Protein involved in DNA replication 450686 8200894 PAS_chr4_0223 Pichia pastoris GS115 Protein involved in DNA replication XP_002493630.1 448041 D 644223 CDS PAS_chr4_0224 254573044 8200895 450886..451965 1 NC_012966.1 Evolutionarily conserved subunit of the CCR4-NOT complex involved in controlling mRNA initiation 451965 8200895 PAS_chr4_0224 Pichia pastoris GS115 Evolutionarily conserved subunit of the CCR4-NOT complex involved in controlling mRNA initiation XP_002493631.1 450886 D 644223 CDS PAS_chr4_0225 254573046 8200896 452161..454884 1 NC_012966.1 Gamma subunit of coatomer, a heptameric protein complex that together with Arf1p forms the COPI coat 454884 8200896 PAS_chr4_0225 Pichia pastoris GS115 Gamma subunit of coatomer, a heptameric protein complex that together with Arf1p forms the COPI coat XP_002493632.1 452161 D 644223 CDS PAS_chr4_0929 254573048 8200897 454981..455997 1 NC_012966.1 hypothetical protein 455997 8200897 PAS_chr4_0929 Pichia pastoris GS115 hypothetical protein XP_002493633.1 454981 D 644223 CDS PAS_chr4_0226 254573050 8200962 456157..457341 1 NC_012966.1 P-loop ATPase with similarity to human OLA1 and bacterial YchF 457341 8200962 PAS_chr4_0226 Pichia pastoris GS115 P-loop ATPase with similarity to human OLA1 and bacterial YchF XP_002493634.1 456157 D 644223 CDS PAS_chr4_0227 254573052 8200898 457484..458398 1 NC_012966.1 Copper-binding protein of the mitochondrial inner membrane 458398 8200898 PAS_chr4_0227 Pichia pastoris GS115 Copper-binding protein of the mitochondrial inner membrane XP_002493635.1 457484 D 644223 CDS PAS_chr4_0930 254573054 8200899 complement(458458..460686) 1 NC_012966.1 hypothetical protein 460686 8200899 PAS_chr4_0930 Pichia pastoris GS115 hypothetical protein XP_002493636.1 458458 R 644223 CDS PAS_chr4_0228 254573056 8200963 complement(460849..462855) 1 NC_012966.1 Acetolactate synthase, catalyses the first common step in isoleucine and valine biosynthesis 462855 8200963 PAS_chr4_0228 Pichia pastoris GS115 Acetolactate synthase, catalyses the first common step in isoleucine and valine biosynthesis XP_002493637.1 460849 R 644223 CDS PAS_chr4_0229 254573058 8200900 complement(463110..464915) 1 NC_012966.1 Catalytic subunit of TRAMP (Trf4/Pap2p-Mtr4p-Air1p/2p) 464915 8200900 PAS_chr4_0229 Pichia pastoris GS115 Catalytic subunit of TRAMP (Trf4/Pap2p-Mtr4p-Air1p/2p) XP_002493638.1 463110 R 644223 CDS PAS_chr4_0931 254573060 8200901 complement(465024..467189) 1 NC_012966.1 hypothetical protein 467189 8200901 PAS_chr4_0931 Pichia pastoris GS115 hypothetical protein XP_002493639.1 465024 R 644223 CDS PAS_chr4_0230 254573062 8200964 complement(467195..467803) 1 NC_012966.1 hypothetical protein 467803 8200964 PAS_chr4_0230 Pichia pastoris GS115 hypothetical protein XP_002493640.1 467195 R 644223 CDS PAS_chr4_0231 254573064 8200902 467913..470213 1 NC_012966.1 Putative nucleolar DEAD box RNA helicase 470213 8200902 PAS_chr4_0231 Pichia pastoris GS115 Putative nucleolar DEAD box RNA helicase XP_002493641.1 467913 D 644223 CDS PAS_chr4_0232 254573066 8200903 470358..471599 1 NC_012966.1 Protein with carboxyl methyl esterase activity 471599 8200903 PAS_chr4_0232 Pichia pastoris GS115 Protein with carboxyl methyl esterase activity XP_002493642.1 470358 D 644223 CDS PAS_chr4_0233 254573068 8200904 complement(471614..473752) 1 NC_012966.1 Glutamine-dependent NAD(+) synthetase 473752 8200904 PAS_chr4_0233 Pichia pastoris GS115 Glutamine-dependent NAD(+) synthetase XP_002493643.1 471614 R 644223 CDS PAS_chr4_0234 254573070 8200905 473963..474634 1 NC_012966.1 Integral membrane protein of the early Golgi apparatus and endoplasmic reticulum 474634 8200905 PAS_chr4_0234 Pichia pastoris GS115 Integral membrane protein of the early Golgi apparatus and endoplasmic reticulum XP_002493644.1 473963 D 644223 CDS PAS_chr4_0235 254573072 8200906 complement(474676..477528) 1 NC_012966.1 hypothetical protein 477528 8200906 PAS_chr4_0235 Pichia pastoris GS115 hypothetical protein XP_002493645.1 474676 R 644223 CDS PAS_chr4_0238 254573074 8200907 complement(480926..482569) 1 NC_012966.1 Subunit of TFIIH and nucleotide excision repair factor 3 complexes 482569 8200907 PAS_chr4_0238 Pichia pastoris GS115 Subunit of TFIIH and nucleotide excision repair factor 3 complexes XP_002493646.1 480926 R 644223 CDS PAS_chr4_0239 254573076 8200908 482791..486267 1 NC_012966.1 Second-largest subunit of RNA polymerase III 486267 8200908 PAS_chr4_0239 Pichia pastoris GS115 Second-largest subunit of RNA polymerase III XP_002493647.1 482791 D 644223 CDS PAS_chr4_0240 254573078 8200909 complement(486364..488484) 1 NC_012966.1 Ferric reductase, reduces siderophore-bound iron prior to uptake by transporters 488484 8200909 PAS_chr4_0240 Pichia pastoris GS115 Ferric reductase, reduces siderophore-bound iron prior to uptake by transporters XP_002493648.1 486364 R 644223 CDS PAS_chr4_0241 254573080 8200910 490508..492667 1 NC_012966.1 Putative ATPase of the AAA family 492667 8200910 PAS_chr4_0241 Pichia pastoris GS115 Putative ATPase of the AAA family XP_002493649.1 490508 D 644223 CDS PAS_chr4_0242 254573082 8200911 complement(492720..493973) 1 NC_012966.1 Nuclear type II J heat shock protein of the E. coli dnaJ family 493973 8200911 PAS_chr4_0242 Pichia pastoris GS115 Nuclear type II J heat shock protein of the E. coli dnaJ family XP_002493650.1 492720 R 644223 CDS PAS_chr4_0243 254573084 8200912 complement(494135..495982) 1 NC_012966.1 hypothetical protein 495982 8200912 PAS_chr4_0243 Pichia pastoris GS115 hypothetical protein XP_002493651.1 494135 R 644223 CDS PAS_chr4_0244 254573086 8200913 496744..497475 1 NC_012966.1 hypothetical protein 497475 8200913 PAS_chr4_0244 Pichia pastoris GS115 hypothetical protein XP_002493652.1 496744 D 644223 CDS PAS_chr4_0245 254573088 8200914 complement(497544..498194) 1 NC_012966.1 hypothetical protein 498194 8200914 PAS_chr4_0245 Pichia pastoris GS115 hypothetical protein XP_002493653.1 497544 R 644223 CDS PAS_chr4_0932 254573090 8200915 498569..500821 1 NC_012966.1 hypothetical protein 500821 8200915 PAS_chr4_0932 Pichia pastoris GS115 hypothetical protein XP_002493654.1 498569 D 644223 CDS PAS_chr4_0246 254573092 8200965 join(501177..501190,501407..502241) 1 NC_012966.1 Protein component of the small (40S) ribosomal subunit 502241 8200965 PAS_chr4_0246 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002493655.1 501177 D 644223 CDS PAS_chr4_0933 254573094 8200916 502438..503268 1 NC_012966.1 hypothetical protein 503268 8200916 PAS_chr4_0933 Pichia pastoris GS115 hypothetical protein XP_002493656.1 502438 D 644223 CDS PAS_chr4_0247 254573096 8200966 complement(503286..503921) 1 NC_012966.1 5,10-methenyltetrahydrofolate synthetase, involved in folic acid biosynthesis 503921 8200966 PAS_chr4_0247 Pichia pastoris GS115 5,10-methenyltetrahydrofolate synthetase, involved in folic acid biosynthesis XP_002493657.1 503286 R 644223 CDS PAS_chr4_0248 254573098 8200917 504239..505456 1 NC_012966.1 Mitochondrial branched-chain amino acid aminotransferase, homolog of murine ECA39 505456 8200917 PAS_chr4_0248 Pichia pastoris GS115 Mitochondrial branched-chain amino acid aminotransferase, homolog of murine ECA39 XP_002493658.1 504239 D 644223 CDS PAS_chr4_0249 254573100 8200918 505605..505874 1 NC_012966.1 Proposed transcription factor 505874 8200918 PAS_chr4_0249 Pichia pastoris GS115 Proposed transcription factor XP_002493659.1 505605 D 644223 CDS PAS_chr4_0250 254573102 8200919 complement(505948..507969) 1 NC_012966.1 DEAD-box protein required for efficient splicing of mitochondrial Group I and II introns 507969 8200919 PAS_chr4_0250 Pichia pastoris GS115 DEAD-box protein required for efficient splicing of mitochondrial Group I and II introns XP_002493660.1 505948 R 644223 CDS PAS_chr4_0251 254573104 8200920 508463..510340 1 NC_012966.1 Hydrophilic protein, involved in vesicle trafficking between the ER and Golgi 510340 8200920 PAS_chr4_0251 Pichia pastoris GS115 Hydrophilic protein, involved in vesicle trafficking between the ER and Golgi XP_002493661.1 508463 D 644223 CDS PAS_chr4_0252 254573106 8200921 complement(511111..511764) 1 NC_012966.1 hypothetical protein 511764 8200921 PAS_chr4_0252 Pichia pastoris GS115 hypothetical protein XP_002493662.1 511111 R 644223 CDS PAS_chr4_0253 254573108 8200922 512697..513440 1 NC_012966.1 Mitochondrial ribosome recycling factor 513440 8200922 PAS_chr4_0253 Pichia pastoris GS115 Mitochondrial ribosome recycling factor XP_002493663.1 512697 D 644223 CDS PAS_chr4_0254 254573110 8200923 complement(513441..515351) 1 NC_012966.1 hypothetical protein 515351 8200923 PAS_chr4_0254 Pichia pastoris GS115 hypothetical protein XP_002493664.1 513441 R 644223 CDS PAS_chr4_0255 254573112 8200924 complement(join(515603..515871,516103..516178)) 1 NC_012966.1 hypothetical protein 516178 8200924 PAS_chr4_0255 Pichia pastoris GS115 hypothetical protein XP_002493665.1 515603 R 644223 CDS PAS_chr4_0256 254573114 8200925 516405..517445 1 NC_012966.1 Essential protein required for the accumulation of box C/D snoRNA 517445 8200925 PAS_chr4_0256 Pichia pastoris GS115 Essential protein required for the accumulation of box C/D snoRNA XP_002493666.1 516405 D 644223 CDS PAS_chr4_0257 254573116 8200926 complement(517432..519429) 1 NC_012966.1 Putative protein of unknown function 519429 8200926 PAS_chr4_0257 Pichia pastoris GS115 Putative protein of unknown function XP_002493667.1 517432 R 644223 CDS PAS_chr4_0258 254573118 8200927 complement(join(519551..520513,520566..520604)) 1 NC_012966.1 Essential component of the Rix1 complex (with Rix1p and Ipi3p) 520604 8200927 PAS_chr4_0258 Pichia pastoris GS115 Essential component of the Rix1 complex (with Rix1p and Ipi3p) XP_002493668.1 519551 R 644223 CDS PAS_chr4_0934 254573120 8200928 520736..521863 1 NC_012966.1 hypothetical protein 521863 8200928 PAS_chr4_0934 Pichia pastoris GS115 hypothetical protein XP_002493669.1 520736 D 644223 CDS PAS_chr4_0259 254573122 8200967 521976..523460 1 NC_012966.1 Delta(9) fatty acid desaturase 523460 8200967 PAS_chr4_0259 Pichia pastoris GS115 Delta(9) fatty acid desaturase XP_002493670.1 521976 D 644223 CDS PAS_chr4_0936 254573124 8200929 523651..524625 1 NC_012966.1 hypothetical protein 524625 8200929 PAS_chr4_0936 Pichia pastoris GS115 hypothetical protein XP_002493671.1 523651 D 644223 CDS PAS_chr4_0937 254573126 8200969 524902..526383 1 NC_012966.1 hypothetical protein 526383 8200969 PAS_chr4_0937 Pichia pastoris GS115 hypothetical protein XP_002493672.1 524902 D 644223 CDS PAS_chr4_0260 254573128 8200970 526809..529127 1 NC_012966.1 Nonessential putative serine/threonine protein kinase of unknown cellular role 529127 8200970 PAS_chr4_0260 Pichia pastoris GS115 Nonessential putative serine/threonine protein kinase of unknown cellular role XP_002493673.1 526809 D 644223 CDS PAS_chr4_0261 254573130 8200930 complement(529185..530330) 1 NC_012966.1 ER membrane glycoprotein subunit of the glycosylphosphatidylinositol transamidase complex 530330 8200930 PAS_chr4_0261 Pichia pastoris GS115 ER membrane glycoprotein subunit of the glycosylphosphatidylinositol transamidase complex XP_002493674.1 529185 R 644223 CDS PAS_chr4_0262 254573132 8200931 530593..531159 1 NC_012966.1 GTP-binding protein involved in beta-tubulin (Tub2p) folding 531159 8200931 PAS_chr4_0262 Pichia pastoris GS115 GTP-binding protein involved in beta-tubulin (Tub2p) folding XP_002493675.1 530593 D 644223 CDS PAS_chr4_0263 254573134 8200932 531660..534272 1 NC_012966.1 Karyopherin beta, forms a dimeric complex with Srp1p (Kap60p) 534272 8200932 PAS_chr4_0263 Pichia pastoris GS115 Karyopherin beta, forms a dimeric complex with Srp1p (Kap60p) XP_002493676.1 531660 D 644223 CDS PAS_chr4_0264 254573136 8200933 534374..535111 1 NC_012966.1 Dolichyl pyrophosphate (Dol-P-P) phosphatase with a luminally oriented active site in the ER 535111 8200933 PAS_chr4_0264 Pichia pastoris GS115 Dolichyl pyrophosphate (Dol-P-P) phosphatase with a luminally oriented active site in the ER XP_002493677.1 534374 D 644223 CDS PAS_chr4_0265 254573138 8200934 join(535563..535616,535879..535995) 1 NC_012966.1 Putative protein of unknown function identified by fungal homology comparisons and RT-PCR 535995 8200934 PAS_chr4_0265 Pichia pastoris GS115 Putative protein of unknown function identified by fungal homology comparisons and RT-PCR XP_002493678.1 535563 D 644223 CDS PAS_chr4_0266 254573140 8200935 complement(536285..537793) 1 NC_012966.1 Similar to 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase enzymes 537793 8200935 PAS_chr4_0266 Pichia pastoris GS115 Similar to 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase enzymes XP_002493679.1 536285 R 644223 CDS PAS_chr4_0267 254573142 8200936 complement(538316..538699) 1 NC_012966.1 Protein component of the large (60S) ribosomal subunit 538699 8200936 PAS_chr4_0267 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit XP_002493680.1 538316 R 644223 CDS PAS_chr4_0268 254573144 8200937 539150..539911 1 NC_012966.1 hypothetical protein 539911 8200937 PAS_chr4_0268 Pichia pastoris GS115 hypothetical protein XP_002493681.1 539150 D 644223 CDS PAS_chr4_0269 254573146 8200938 complement(539945..542752) 1 NC_012966.1 Essential nuclear protein with a possible role in the osmoregulatory glycerol response 542752 8200938 PAS_chr4_0269 Pichia pastoris GS115 Essential nuclear protein with a possible role in the osmoregulatory glycerol response XP_002493682.1 539945 R 644223 CDS PAS_chr4_0270 254573148 8200939 543289..544365 1 NC_012966.1 Mitochondrial protein involved in sorting of proteins in the mitochondria 544365 8200939 PAS_chr4_0270 Pichia pastoris GS115 Mitochondrial protein involved in sorting of proteins in the mitochondria XP_002493683.1 543289 D 644223 CDS PAS_chr4_0271 254573150 8200940 join(545401..545441,545498..546785) 1 NC_012966.1 Protein containing GATA family zinc finger motifs 546785 8200940 PAS_chr4_0271 Pichia pastoris GS115 Protein containing GATA family zinc finger motifs XP_002493684.1 545401 D 644223 CDS PAS_chr4_0272 254573152 8200941 547078..548802 1 NC_012966.1 Cytochrome b2 (L-lactate cytochrome-c oxidoreductase) 548802 8200941 PAS_chr4_0272 Pichia pastoris GS115 Cytochrome b2 (L-lactate cytochrome-c oxidoreductase) XP_002493685.1 547078 D 644223 CDS PAS_chr4_0273 254573154 8200942 549232..550245 1 NC_012966.1 hypothetical protein 550245 8200942 PAS_chr4_0273 Pichia pastoris GS115 hypothetical protein XP_002493686.1 549232 D 644223 CDS PAS_chr4_0274 254573156 8200943 complement(550437..551180) 1 NC_012966.1 Essential nucleolar protein involved in the early steps of 35S rRNA processing 551180 8200943 PAS_chr4_0274 Pichia pastoris GS115 Essential nucleolar protein involved in the early steps of 35S rRNA processing XP_002493687.1 550437 R 644223 CDS PAS_chr4_0275 254573158 8200944 complement(551437..552327) 1 NC_012966.1 hypothetical protein 552327 8200944 PAS_chr4_0275 Pichia pastoris GS115 hypothetical protein XP_002493688.1 551437 R 644223 CDS PAS_chr4_0276 254573160 8200945 552563..554053 1 NC_012966.1 Alpha subunit of cytoplasmic phenylalanyl-tRNA synthetase 554053 8200945 PAS_chr4_0276 Pichia pastoris GS115 Alpha subunit of cytoplasmic phenylalanyl-tRNA synthetase XP_002493689.1 552563 D 644223 CDS PAS_chr4_0277 254573162 8200946 554321..557053 1 NC_012966.1 Protein that interacts with Sin3p in a two-hybrid assay 557053 8200946 PAS_chr4_0277 Pichia pastoris GS115 Protein that interacts with Sin3p in a two-hybrid assay XP_002493690.1 554321 D 644223 CDS PAS_chr4_0278 254573164 8200947 complement(557840..559405) 1 NC_012966.1 Protein involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis 559405 8200947 PAS_chr4_0278 Pichia pastoris GS115 Protein involved in pre-rRNA processing, 18S rRNA synthesis, and snoRNA synthesis XP_002493691.1 557840 R 644223 CDS PAS_chr4_0279 254573166 8200948 join(559692..561917,561965..563932) 1 NC_012966.1 Essential tripartite DNA replication factor with single-stranded DNA-dependent ATPase 563932 8200948 PAS_chr4_0279 Pichia pastoris GS115 Essential tripartite DNA replication factor with single-stranded DNA-dependent ATPase XP_002493692.1 559692 D 644223 CDS PAS_chr4_0280 254573168 8200949 564053..564775 1 NC_012966.1 Putative methylthio-ribulose-1-phosphate dehydratase 564775 8200949 PAS_chr4_0280 Pichia pastoris GS115 Putative methylthio-ribulose-1-phosphate dehydratase XP_002493693.1 564053 D 644223 CDS PAS_chr4_0281 254573170 8200950 complement(join(564837..565015,565227..565254)) 1 NC_012966.1 hypothetical protein 565254 8200950 PAS_chr4_0281 Pichia pastoris GS115 hypothetical protein XP_002493694.1 564837 R 644223 CDS PAS_chr4_0938 254573172 8200951 complement(565985..566860) 1 NC_012966.1 hypothetical protein 566860 8200951 PAS_chr4_0938 Pichia pastoris GS115 hypothetical protein XP_002493695.1 565985 R 644223 CDS PAS_chr4_0939 254573174 8200971 complement(join(567012..567635,567694..567831)) 1 NC_012966.1 hypothetical protein 567831 8200971 PAS_chr4_0939 Pichia pastoris GS115 hypothetical protein XP_002493696.1 567012 R 644223 CDS PAS_chr4_0282 254573176 8200972 complement(join(568021..570279,570337..570396)) 1 NC_012966.1 Microtubule-associated protein (MAP) of the XMAP215/Dis1 family 570396 8200972 PAS_chr4_0282 Pichia pastoris GS115 Microtubule-associated protein (MAP) of the XMAP215/Dis1 family XP_002493697.1 568021 R 644223 CDS PAS_chr4_0283 254573178 8200952 complement(join(570623..571186,571250..571264)) 1 NC_012966.1 hypothetical protein 571264 8200952 PAS_chr4_0283 Pichia pastoris GS115 hypothetical protein XP_002493698.1 570623 R 644223 CDS PAS_chr4_0284 254573180 8200501 572333..572641 1 NC_012966.1 Cytoplasmic thioredoxin isoenzyme of the thioredoxin system 572641 8200501 PAS_chr4_0284 Pichia pastoris GS115 Cytoplasmic thioredoxin isoenzyme of the thioredoxin system XP_002493699.1 572333 D 644223 CDS PAS_chr4_0940 254573182 8200727 572827..573693 1 NC_012966.1 hypothetical protein 573693 8200727 PAS_chr4_0940 Pichia pastoris GS115 hypothetical protein XP_002493700.1 572827 D 644223 CDS PAS_chr4_0285 254573184 8200973 complement(573722..574663) 1 NC_012966.1 Phosphoserine phosphatase of the phosphoglycerate pathway, involved in serine and glycine biosynthes 574663 8200973 PAS_chr4_0285 Pichia pastoris GS115 Phosphoserine phosphatase of the phosphoglycerate pathway, involved in serine and glycine biosynthes XP_002493701.1 573722 R 644223 CDS PAS_chr4_0286 254573186 8200728 574794..576347 1 NC_012966.1 Protein involved in the transcription of 35S rRNA genes by RNA polymerase I 576347 8200728 PAS_chr4_0286 Pichia pastoris GS115 Protein involved in the transcription of 35S rRNA genes by RNA polymerase I XP_002493702.1 574794 D 644223 CDS PAS_chr4_0287 254573188 8200729 577083..578861 1 NC_012966.1 Dicarboxylic amino acid permease 578861 8200729 PAS_chr4_0287 Pichia pastoris GS115 Dicarboxylic amino acid permease XP_002493703.1 577083 D 644223 CDS PAS_chr4_0288 254573190 8200730 complement(579017..581017) 1 NC_012966.1 Protein interacting with poly(A)-binding protein Pab1p 581017 8200730 PAS_chr4_0288 Pichia pastoris GS115 Protein interacting with poly(A)-binding protein Pab1p XP_002493704.1 579017 R 644223 CDS PAS_chr4_0289 254573192 8200731 581370..581714 1 NC_012966.1 hypothetical protein 581714 8200731 PAS_chr4_0289 Pichia pastoris GS115 hypothetical protein XP_002493705.1 581370 D 644223 CDS PAS_chr4_0290 254573194 8200732 join(581939..581972,582030..582364) 1 NC_012966.1 Vacuolar transporter chaperon (VTC) involved in distributing V-ATPase and other membrane proteins 582364 8200732 PAS_chr4_0290 Pichia pastoris GS115 Vacuolar transporter chaperon (VTC) involved in distributing V-ATPase and other membrane proteins XP_002493706.1 581939 D 644223 CDS PAS_chr4_0291 254573196 8200733 582570..582809 1 NC_012966.1 hypothetical protein 582809 8200733 PAS_chr4_0291 Pichia pastoris GS115 hypothetical protein XP_002493707.1 582570 D 644223 CDS PAS_chr4_0292 254573198 8200734 join(583080..583082,583214..583618) 1 NC_012966.1 Protein component of the small (40S) ribosomal subunit 583618 8200734 PAS_chr4_0292 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002493708.1 583080 D 644223 CDS PAS_chr4_0293 254573200 8200735 complement(join(583732..584824,584894..584934)) 1 NC_012966.1 Component of the septin ring of the mother-bud neck that is required for cytokinesis 584934 8200735 PAS_chr4_0293 Pichia pastoris GS115 Component of the septin ring of the mother-bud neck that is required for cytokinesis XP_002493709.1 583732 R 644223 CDS PAS_chr4_0294 254573202 8200736 585178..586272 1 NC_012966.1 Anthranilate phosphoribosyl transferase of the tryptophan biosynthetic pathway 586272 8200736 PAS_chr4_0294 Pichia pastoris GS115 Anthranilate phosphoribosyl transferase of the tryptophan biosynthetic pathway XP_002493710.1 585178 D 644223 CDS PAS_chr4_0295 254573204 8200737 complement(586315..589158) 1 NC_012966.1 hypothetical protein 589158 8200737 PAS_chr4_0295 Pichia pastoris GS115 hypothetical protein XP_002493711.1 586315 R 644223 CDS PAS_chr4_0296 254573206 8200738 complement(589409..589786) 1 NC_012966.1 hypothetical protein 589786 8200738 PAS_chr4_0296 Pichia pastoris GS115 hypothetical protein XP_002493712.1 589409 R 644223 CDS PAS_chr4_0297 254573208 8200739 589920..591638 1 NC_012966.1 Golgi-localized protein with homology to gamma-adaptin 591638 8200739 PAS_chr4_0297 Pichia pastoris GS115 Golgi-localized protein with homology to gamma-adaptin XP_002493713.1 589920 D 644223 CDS PAS_chr4_0298 254573210 8200740 complement(591699..594854) 1 NC_012966.1 Component of the NuA4 histone acetyltransferase complex 594854 8200740 PAS_chr4_0298 Pichia pastoris GS115 Component of the NuA4 histone acetyltransferase complex XP_002493714.1 591699 R 644223 CDS PAS_chr4_0941 254573212 8200741 complement(594985..596148) 1 NC_012966.1 hypothetical protein 596148 8200741 PAS_chr4_0941 Pichia pastoris GS115 hypothetical protein XP_002493715.1 594985 R 644223 CDS PAS_chr4_0299 254573214 8200974 596268..596639 1 NC_012966.1 hypothetical protein 596639 8200974 PAS_chr4_0299 Pichia pastoris GS115 hypothetical protein XP_002493716.1 596268 D 644223 CDS PAS_chr4_0300 254573216 8200742 596935..598206 1 NC_012966.1 One of six ATPases of the 19S regulatory particle of the 26S proteasome 598206 8200742 PAS_chr4_0300 Pichia pastoris GS115 One of six ATPases of the 19S regulatory particle of the 26S proteasome XP_002493717.1 596935 D 644223 CDS PAS_chr4_0301 254573218 8200743 complement(598250..599143) 1 NC_012966.1 Essential protein involved in nuclear export of Mss4p 599143 8200743 PAS_chr4_0301 Pichia pastoris GS115 Essential protein involved in nuclear export of Mss4p XP_002493718.1 598250 R 644223 CDS PAS_chr4_0942 254573220 8200744 599257..600729 1 NC_012966.1 hypothetical protein 600729 8200744 PAS_chr4_0942 Pichia pastoris GS115 hypothetical protein XP_002493719.1 599257 D 644223 CDS PAS_chr4_0302 254573222 8200975 600874..605256 1 NC_012966.1 RNA polymerase III subunit C160, part of core enzyme 605256 8200975 PAS_chr4_0302 Pichia pastoris GS115 RNA polymerase III subunit C160, part of core enzyme XP_002493720.1 600874 D 644223 CDS PAS_chr4_0303 254573224 8200745 complement(605363..606178) 1 NC_012966.1 Putative protein of unknown function 606178 8200745 PAS_chr4_0303 Pichia pastoris GS115 Putative protein of unknown function XP_002493721.1 605363 R 644223 CDS PAS_chr4_0304 254573226 8200746 606335..606961 1 NC_012966.1 hypothetical protein 606961 8200746 PAS_chr4_0304 Pichia pastoris GS115 hypothetical protein XP_002493722.1 606335 D 644223 CDS PAS_chr4_0305 254573228 8200747 607132..608103 1 NC_012966.1 O-glycosylated protein required for cell wall stability 608103 8200747 PAS_chr4_0305 Pichia pastoris GS115 O-glycosylated protein required for cell wall stability XP_002493723.1 607132 D 644223 CDS PAS_chr4_0306 254573230 8200748 complement(608274..610280) 1 NC_012966.1 hypothetical protein 610280 8200748 PAS_chr4_0306 Pichia pastoris GS115 hypothetical protein XP_002493724.1 608274 R 644223 CDS PAS_chr4_0307 254573232 8200749 complement(610588..611697) 1 NC_012966.1 Putative protein of unknown function 611697 8200749 PAS_chr4_0307 Pichia pastoris GS115 Putative protein of unknown function XP_002493725.1 610588 R 644223 CDS PAS_chr4_0308 254573234 8200750 complement(613304..617806) 1 NC_012966.1 Transcription elongation factor 617806 8200750 PAS_chr4_0308 Pichia pastoris GS115 Transcription elongation factor XP_002493726.1 613304 R 644223 CDS PAS_chr4_0309 254573236 8200751 complement(617979..618566) 1 NC_012966.1 hypothetical protein 618566 8200751 PAS_chr4_0309 Pichia pastoris GS115 hypothetical protein XP_002493727.1 617979 R 644223 CDS PAS_chr4_0943 254573238 8200752 618897..619952 1 NC_012966.1 hypothetical protein 619952 8200752 PAS_chr4_0943 Pichia pastoris GS115 hypothetical protein XP_002493728.1 618897 D 644223 CDS PAS_chr4_0310 254573240 8200976 620022..620966 1 NC_012966.1 Putative protein of unknown function 620966 8200976 PAS_chr4_0310 Pichia pastoris GS115 Putative protein of unknown function XP_002493729.1 620022 D 644223 CDS PAS_chr4_0311 254573242 8200753 621195..622319 1 NC_012966.1 2-enoyl thioester reductase, member of the medium chain dehydrogenase/reductase family 622319 8200753 PAS_chr4_0311 Pichia pastoris GS115 2-enoyl thioester reductase, member of the medium chain dehydrogenase/reductase family XP_002493730.1 621195 D 644223 CDS PAS_chr4_0944 254573244 8200754 622414..622782 1 NC_012966.1 hypothetical protein 622782 8200754 PAS_chr4_0944 Pichia pastoris GS115 hypothetical protein XP_002493731.1 622414 D 644223 CDS PAS_chr4_0312 254573246 8200977 622978..623604 1 NC_012966.1 tRNA 2'-phosphotransferase 623604 8200977 PAS_chr4_0312 Pichia pastoris GS115 tRNA 2'-phosphotransferase XP_002493732.1 622978 D 644223 CDS PAS_chr4_0313 254573248 8200755 complement(623610..625871) 1 NC_012966.1 Member of the PAK family of serine/threonine protein kinases with similarity to Ste20p and Cla4p 625871 8200755 PAS_chr4_0313 Pichia pastoris GS115 Member of the PAK family of serine/threonine protein kinases with similarity to Ste20p and Cla4p XP_002493733.1 623610 R 644223 CDS PAS_chr4_0314 254573250 8200756 626843..628651 1 NC_012966.1 Phenylpyruvate decarboxylase, catalyzes decarboxylation of phenylpyruvate to phenylacetaldehyde 628651 8200756 PAS_chr4_0314 Pichia pastoris GS115 Phenylpyruvate decarboxylase, catalyzes decarboxylation of phenylpyruvate to phenylacetaldehyde XP_002493734.1 626843 D 644223 CDS PAS_chr4_0945 254573252 8200757 629131..630531 1 NC_012966.1 hypothetical protein 630531 8200757 PAS_chr4_0945 Pichia pastoris GS115 hypothetical protein XP_002493735.1 629131 D 644223 CDS PAS_chr4_0315 254573254 8200978 630699..634337 1 NC_012966.1 Histidine kinase osmosensor that regulates a MAP kinase cascade 634337 8200978 PAS_chr4_0315 Pichia pastoris GS115 Histidine kinase osmosensor that regulates a MAP kinase cascade XP_002493736.1 630699 D 644223 CDS PAS_chr4_0316 254573256 8200758 634603..639669 1 NC_012966.1 Myosin-like protein associated with the nuclear envelope 639669 8200758 PAS_chr4_0316 Pichia pastoris GS115 Myosin-like protein associated with the nuclear envelope XP_002493737.1 634603 D 644223 CDS PAS_chr4_0946 254573258 8200759 join(639785..639869,639918..641467) 1 NC_012966.1 hypothetical protein 641467 8200759 PAS_chr4_0946 Pichia pastoris GS115 hypothetical protein XP_002493738.1 639785 D 644223 CDS PAS_chr4_0317 254573260 8200979 641681..644194 1 NC_012966.1 hypothetical protein 644194 8200979 PAS_chr4_0317 Pichia pastoris GS115 hypothetical protein XP_002493739.1 641681 D 644223 CDS PAS_chr4_0318 254573262 8200760 complement(644240..645622) 1 NC_012966.1 Putative transporter, member of a family of seven S. cerevisiae genes (AVT1-7) 645622 8200760 PAS_chr4_0318 Pichia pastoris GS115 Putative transporter, member of a family of seven S. cerevisiae genes (AVT1-7) XP_002493740.1 644240 R 644223 CDS PAS_chr4_0319 254573264 8200761 complement(645699..647036) 1 NC_012966.1 N-acetyltransferase, confers resistance to the sphingolipid biosynthesis inhibitor myriocin (ISP-1) 647036 8200761 PAS_chr4_0319 Pichia pastoris GS115 N-acetyltransferase, confers resistance to the sphingolipid biosynthesis inhibitor myriocin (ISP-1) XP_002493741.1 645699 R 644223 CDS PAS_chr4_0320 254573266 8200762 complement(647131..649668) 1 NC_012966.1 hypothetical protein 649668 8200762 PAS_chr4_0320 Pichia pastoris GS115 hypothetical protein XP_002493742.1 647131 R 644223 CDS PAS_chr4_0321 254573268 8200763 650094..652475 1 NC_012966.1 Putative protein of unknown function 652475 8200763 PAS_chr4_0321 Pichia pastoris GS115 Putative protein of unknown function XP_002493743.1 650094 D 644223 CDS PAS_chr4_0322 254573270 8200764 652689..654245 1 NC_012966.1 Signal recognition particle (SRP) subunit (homolog of mammalian SRP54) 654245 8200764 PAS_chr4_0322 Pichia pastoris GS115 Signal recognition particle (SRP) subunit (homolog of mammalian SRP54) XP_002493744.1 652689 D 644223 CDS PAS_chr4_0323 254573272 8200765 complement(654308..655675) 1 NC_012966.1 Subunit of DNA primase, which is required for DNA synthesis and double-strand break repair 655675 8200765 PAS_chr4_0323 Pichia pastoris GS115 Subunit of DNA primase, which is required for DNA synthesis and double-strand break repair XP_002493745.1 654308 R 644223 CDS PAS_chr4_0324 254573274 8200766 656185..658542 1 NC_012966.1 hypothetical protein 658542 8200766 PAS_chr4_0324 Pichia pastoris GS115 hypothetical protein XP_002493746.1 656185 D 644223 CDS PAS_chr4_0325 254573276 8200767 658735..662652 1 NC_012966.1 Protein with an N-terminal kelch-like domain 662652 8200767 PAS_chr4_0325 Pichia pastoris GS115 Protein with an N-terminal kelch-like domain XP_002493747.1 658735 D 644223 CDS PAS_chr4_0326 254573278 8200768 664233..665645 1 NC_012966.1 Transcriptional activator that enhances pseudohyphal growth 665645 8200768 PAS_chr4_0326 Pichia pastoris GS115 Transcriptional activator that enhances pseudohyphal growth XP_002493748.1 664233 D 644223 CDS PAS_chr4_0327 254573280 8200769 complement(665671..673911) 1 NC_012966.1 Positive regulator of the Gcn2p kinase activity, forms a complex with Gcn20p 673911 8200769 PAS_chr4_0327 Pichia pastoris GS115 Positive regulator of the Gcn2p kinase activity, forms a complex with Gcn20p XP_002493749.1 665671 R 644223 CDS PAS_chr4_0329 254573282 8200770 675506..676240 1 NC_012966.1 Member of the CCCH zinc finger family 676240 8200770 PAS_chr4_0329 Pichia pastoris GS115 Member of the CCCH zinc finger family XP_002493750.1 675506 D 644223 CDS PAS_chr4_0330 254573284 8200771 complement(676443..677771) 1 NC_012966.1 Methionine and cysteine synthase (O-acetyl homoserine-O-acetyl serine sulfhydrylase) 677771 8200771 PAS_chr4_0330 Pichia pastoris GS115 Methionine and cysteine synthase (O-acetyl homoserine-O-acetyl serine sulfhydrylase) XP_002493751.1 676443 R 644223 CDS PAS_chr4_0331 254573286 8200772 678385..679539 1 NC_012966.1 hypothetical protein 679539 8200772 PAS_chr4_0331 Pichia pastoris GS115 hypothetical protein XP_002493752.1 678385 D 644223 CDS PAS_chr4_0332 254573288 8200773 complement(join(679567..680940,680992..681078)) 1 NC_012966.1 hypothetical protein 681078 8200773 PAS_chr4_0332 Pichia pastoris GS115 hypothetical protein XP_002493753.1 679567 R 644223 CDS PAS_chr4_0333 254573290 8200774 681408..682313 1 NC_012966.1 hypothetical protein 682313 8200774 PAS_chr4_0333 Pichia pastoris GS115 hypothetical protein XP_002493754.1 681408 D 644223 CDS PAS_chr4_0334 254573292 8200775 complement(682626..683960) 1 NC_012966.1 Transcription factor involved in glucose repression 683960 8200775 PAS_chr4_0334 Pichia pastoris GS115 Transcription factor involved in glucose repression XP_002493755.1 682626 R 644223 CDS PAS_chr4_0335 254573294 8200776 complement(684568..685875) 1 NC_012966.1 hypothetical protein 685875 8200776 PAS_chr4_0335 Pichia pastoris GS115 hypothetical protein XP_002493756.1 684568 R 644223 CDS PAS_chr4_0336 254573296 8200777 686332..687399 1 NC_012966.1 Putative dihydrokaempferol 4-reductase 687399 8200777 PAS_chr4_0336 Pichia pastoris GS115 Putative dihydrokaempferol 4-reductase XP_002493757.1 686332 D 644223 CDS PAS_chr4_0947 254573298 8200778 complement(687476..688822) 1 NC_012966.1 hypothetical protein 688822 8200778 PAS_chr4_0947 Pichia pastoris GS115 hypothetical protein XP_002493758.1 687476 R 644223 CDS PAS_chr4_0337 254573300 8200980 complement(689274..691001) 1 NC_012966.1 High-affinity inorganic phosphate (Pi) transporter and low-affinity manganese transporter 691001 8200980 PAS_chr4_0337 Pichia pastoris GS115 High-affinity inorganic phosphate (Pi) transporter and low-affinity manganese transporter XP_002493759.1 689274 R 644223 CDS PAS_chr4_0338 254573302 8200779 complement(691450..692223) 1 NC_012966.1 Peroxisomal 2,4-dienoyl-CoA reductase, auxiliary enzyme of fatty acid beta-oxidation 692223 8200779 PAS_chr4_0338 Pichia pastoris GS115 Peroxisomal 2,4-dienoyl-CoA reductase, auxiliary enzyme of fatty acid beta-oxidation XP_002493760.1 691450 R 644223 CDS PAS_chr4_0339 254573304 8200780 complement(692426..693394) 1 NC_012966.1 hypothetical protein 693394 8200780 PAS_chr4_0339 Pichia pastoris GS115 hypothetical protein XP_002493761.1 692426 R 644223 CDS PAS_chr4_0340 254573306 8200781 693620..696433 1 NC_012966.1 hypothetical protein 696433 8200781 PAS_chr4_0340 Pichia pastoris GS115 hypothetical protein XP_002493762.1 693620 D 644223 CDS PAS_chr4_0341 254573308 8200782 complement(696481..697407) 1 NC_012966.1 hypothetical protein 697407 8200782 PAS_chr4_0341 Pichia pastoris GS115 hypothetical protein XP_002493763.1 696481 R 644223 CDS PAS_chr4_0342 254573310 8200783 complement(697593..700643) 1 NC_012966.1 Acid trehalase required for utilization of extracellular trehalose 700643 8200783 PAS_chr4_0342 Pichia pastoris GS115 Acid trehalase required for utilization of extracellular trehalose XP_002493764.1 697593 R 644223 CDS PAS_chr4_0343 254573312 8200784 700931..701722 1 NC_012966.1 Phosphoribosyl-5-amino-1-phosphoribosyl-4- imidazolecarboxiamide isomerase 701722 8200784 PAS_chr4_0343 Pichia pastoris GS115 Phosphoribosyl-5-amino-1-phosphoribosyl-4- imidazolecarboxiamide isomerase XP_002493765.1 700931 D 644223 CDS PAS_chr4_0344 254573314 8200785 702204..703118 1 NC_012966.1 RNA polymerase II third largest subunit B44, part of central core 703118 8200785 PAS_chr4_0344 Pichia pastoris GS115 RNA polymerase II third largest subunit B44, part of central core XP_002493766.1 702204 D 644223 CDS PAS_chr4_0345 254573316 8200786 703261..704181 1 NC_012966.1 Protein containing an Lsm domain, may bind RNA and have a role in RNA processing 704181 8200786 PAS_chr4_0345 Pichia pastoris GS115 Protein containing an Lsm domain, may bind RNA and have a role in RNA processing XP_002493767.1 703261 D 644223 CDS PAS_chr4_0346 254573318 8200787 704294..704893 1 NC_012966.1 Catalytic subunit of the NatB N-terminal acetyltransferase 704893 8200787 PAS_chr4_0346 Pichia pastoris GS115 Catalytic subunit of the NatB N-terminal acetyltransferase XP_002493768.1 704294 D 644223 CDS PAS_chr4_0347 254573320 8200788 complement(704890..706131) 1 NC_012966.1 Peroxisomal adenine nucleotide transporter 706131 8200788 PAS_chr4_0347 Pichia pastoris GS115 Peroxisomal adenine nucleotide transporter XP_002493769.1 704890 R 644223 CDS PAS_chr4_0948 254573322 8200789 complement(706243..707652) 1 NC_012966.1 hypothetical protein 707652 8200789 PAS_chr4_0948 Pichia pastoris GS115 hypothetical protein XP_002493770.1 706243 R 644223 CDS PAS_chr4_0348 254573324 8200981 707958..708395 1 NC_012966.1 Ribosomal protein 28 (rp28) of the small (40S) ribosomal subunit 708395 8200981 PAS_chr4_0348 Pichia pastoris GS115 Ribosomal protein 28 (rp28) of the small (40S) ribosomal subunit XP_002493771.1 707958 D 644223 CDS PAS_chr4_0349 254573326 8200790 complement(708444..709688) 1 NC_012966.1 Protein that interacts with Spt6p and copurifies with Spt5p and RNA polymerase II 709688 8200790 PAS_chr4_0349 Pichia pastoris GS115 Protein that interacts with Spt6p and copurifies with Spt5p and RNA polymerase II XP_002493772.1 708444 R 644223 CDS PAS_chr4_0350 254573328 8200791 709912..710061 1 NC_012966.1 hypothetical protein 710061 8200791 PAS_chr4_0350 Pichia pastoris GS115 hypothetical protein XP_002493773.1 709912 D 644223 CDS PAS_chr4_0351 254573330 8200792 complement(710109..710702) 1 NC_012966.1 hypothetical protein 710702 8200792 PAS_chr4_0351 Pichia pastoris GS115 hypothetical protein XP_002493774.1 710109 R 644223 CDS PAS_chr4_0352 254573332 8200793 711122..713347 1 NC_012966.1 Long chain fatty acyl-CoA synthetase 713347 8200793 PAS_chr4_0352 Pichia pastoris GS115 Long chain fatty acyl-CoA synthetase XP_002493775.1 711122 D 644223 CDS PAS_chr4_0353 254573334 8200794 complement(713400..714047) 1 NC_012966.1 Specialized J-protein that functions with Hsp70 in Fe-S cluster biogenesis in mitochondria 714047 8200794 PAS_chr4_0353 Pichia pastoris GS115 Specialized J-protein that functions with Hsp70 in Fe-S cluster biogenesis in mitochondria XP_002493776.1 713400 R 644223 CDS PAS_chr4_0354 254573336 8200795 complement(714912..716525) 1 NC_012966.1 Nucleoporin, essential subunit of the nuclear pore complex (NPC) 716525 8200795 PAS_chr4_0354 Pichia pastoris GS115 Nucleoporin, essential subunit of the nuclear pore complex (NPC) XP_002493777.1 714912 R 644223 CDS PAS_chr4_0355 254573338 8200796 716736..717290 1 NC_012966.1 hypothetical protein 717290 8200796 PAS_chr4_0355 Pichia pastoris GS115 hypothetical protein XP_002493778.1 716736 D 644223 CDS PAS_chr4_0356 254573340 8200797 complement(717373..722298) 1 NC_012966.1 Adenylate cyclase, required for cAMP production and cAMP-dependent protein kinase signaling 722298 8200797 PAS_chr4_0356 Pichia pastoris GS115 Adenylate cyclase, required for cAMP production and cAMP-dependent protein kinase signaling XP_002493779.1 717373 R 644223 CDS PAS_chr4_0357 254573342 8200798 723960..724943 1 NC_012966.1 hypothetical protein 724943 8200798 PAS_chr4_0357 Pichia pastoris GS115 hypothetical protein XP_002493780.1 723960 D 644223 CDS PAS_chr4_0358 254573344 8200799 725818..727182 1 NC_012966.1 hypothetical protein 727182 8200799 PAS_chr4_0358 Pichia pastoris GS115 hypothetical protein XP_002493781.1 725818 D 644223 CDS PAS_chr4_0359 254573346 8200800 727983..728618 1 NC_012966.1 hypothetical protein 728618 8200800 PAS_chr4_0359 Pichia pastoris GS115 hypothetical protein XP_002493782.1 727983 D 644223 CDS PAS_chr4_0360 254573348 8200801 729302..730399 1 NC_012966.1 hypothetical protein 730399 8200801 PAS_chr4_0360 Pichia pastoris GS115 hypothetical protein XP_002493783.1 729302 D 644223 CDS PAS_chr4_0361 254573350 8200802 731336..732400 1 NC_012966.1 hypothetical protein 732400 8200802 PAS_chr4_0361 Pichia pastoris GS115 hypothetical protein XP_002493784.1 731336 D 644223 CDS PAS_chr4_0363 254573352 8200803 complement(734110..735945) 1 NC_012966.1 hypothetical protein 735945 8200803 PAS_chr4_0363 Pichia pastoris GS115 hypothetical protein XP_002493785.1 734110 R 644223 CDS PAS_chr4_0365 254573354 8200804 737201..737599 1 NC_012966.1 hypothetical protein 737599 8200804 PAS_chr4_0365 Pichia pastoris GS115 hypothetical protein XP_002493786.1 737201 D 644223 CDS PAS_chr4_0949 254573356 8201206 737752..738168 1 NC_012966.1 hypothetical protein 738168 8201206 PAS_chr4_0949 Pichia pastoris GS115 hypothetical protein XP_002493787.1 737752 D 644223 CDS PAS_chr4_0366 254573358 8200982 738906..740537 1 NC_012966.1 Protein required for daughter cell separation, multiple mitotic checkpoints and chromosome stability 740537 8200982 PAS_chr4_0366 Pichia pastoris GS115 Protein required for daughter cell separation, multiple mitotic checkpoints and chromosome stability XP_002493788.1 738906 D 644223 CDS PAS_chr4_0367 254573360 8200583 740706..741377 1 NC_012966.1 hypothetical protein 741377 8200583 PAS_chr4_0367 Pichia pastoris GS115 hypothetical protein XP_002493789.1 740706 D 644223 CDS PAS_chr4_0368 254573362 8201031 741462..742472 1 NC_012966.1 Microsomal beta-keto-reductase 742472 8201031 PAS_chr4_0368 Pichia pastoris GS115 Microsomal beta-keto-reductase XP_002493790.1 741462 D 644223 CDS PAS_chr4_0950 254573364 8201111 742713..743681 1 NC_012966.1 hypothetical protein 743681 8201111 PAS_chr4_0950 Pichia pastoris GS115 hypothetical protein XP_002493791.1 742713 D 644223 CDS PAS_chr4_0369 254573366 8200983 743945..747127 1 NC_012966.1 Subunit alpha of assimilatory sulfite reductase 747127 8200983 PAS_chr4_0369 Pichia pastoris GS115 Subunit alpha of assimilatory sulfite reductase XP_002493792.1 743945 D 644223 CDS PAS_chr4_0951 254573368 8201112 747294..749414 1 NC_012966.1 hypothetical protein 749414 8201112 PAS_chr4_0951 Pichia pastoris GS115 hypothetical protein XP_002493793.1 747294 D 644223 CDS PAS_chr4_0370 254573370 8200984 749536..749904 1 NC_012966.1 Protein that associates with the INO80 chromatin remodeling complex under low-salt conditions 749904 8200984 PAS_chr4_0370 Pichia pastoris GS115 Protein that associates with the INO80 chromatin remodeling complex under low-salt conditions XP_002493794.1 749536 D 644223 CDS PAS_chr4_0371 254573372 8201113 complement(749938..750396) 1 NC_012966.1 hypothetical protein 750396 8201113 PAS_chr4_0371 Pichia pastoris GS115 hypothetical protein XP_002493795.1 749938 R 644223 CDS PAS_chr4_0372 254573374 8201190 complement(750614..751558) 1 NC_012966.1 Putative protein of unknown function 751558 8201190 PAS_chr4_0372 Pichia pastoris GS115 Putative protein of unknown function XP_002493796.1 750614 R 644223 CDS PAS_chr4_0374 254573376 8200658 753105..753284 1 NC_012966.1 hypothetical protein 753284 8200658 PAS_chr4_0374 Pichia pastoris GS115 hypothetical protein XP_002493797.1 753105 D 644223 CDS PAS_chr4_0375 254573378 8200659 753707..754330 1 NC_012966.1 hypothetical protein 754330 8200659 PAS_chr4_0375 Pichia pastoris GS115 hypothetical protein XP_002493798.1 753707 D 644223 CDS PAS_chr4_0376 254573380 8200660 complement(754404..755063) 1 NC_012966.1 Subunit of both the NuA4 histone H4 acetyltransferase complex and the SWR1 complex 755063 8200660 PAS_chr4_0376 Pichia pastoris GS115 Subunit of both the NuA4 histone H4 acetyltransferase complex and the SWR1 complex XP_002493799.1 754404 R 644223 CDS PAS_chr4_0377 254573382 8200661 join(755240..755269,755322..756677) 1 NC_012966.1 One of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC) 756677 8200661 PAS_chr4_0377 Pichia pastoris GS115 One of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC) XP_002493800.1 755240 D 644223 CDS PAS_chr4_0378 254573384 8200662 756739..757410 1 NC_012966.1 Putative protein of unknown function 757410 8200662 PAS_chr4_0378 Pichia pastoris GS115 Putative protein of unknown function XP_002493801.1 756739 D 644223 CDS PAS_chr4_0952 254573386 8200663 757528..758235 1 NC_012966.1 hypothetical protein 758235 8200663 PAS_chr4_0952 Pichia pastoris GS115 hypothetical protein XP_002493802.1 757528 D 644223 CDS PAS_chr4_0953 254573388 8200985 758560..758937 1 NC_012966.1 hypothetical protein 758937 8200985 PAS_chr4_0953 Pichia pastoris GS115 hypothetical protein XP_002493803.1 758560 D 644223 CDS PAS_chr4_0379 254573390 8200986 759224..761038 1 NC_012966.1 Probable type-III integral membrane protein of unknown function 761038 8200986 PAS_chr4_0379 Pichia pastoris GS115 Probable type-III integral membrane protein of unknown function XP_002493804.1 759224 D 644223 CDS PAS_chr4_0954 254573392 8200664 761167..762480 1 NC_012966.1 hypothetical protein 762480 8200664 PAS_chr4_0954 Pichia pastoris GS115 hypothetical protein XP_002493805.1 761167 D 644223 CDS PAS_chr4_0955 254573394 8200987 762723..766247 1 NC_012966.1 hypothetical protein 766247 8200987 PAS_chr4_0955 Pichia pastoris GS115 hypothetical protein XP_002493806.1 762723 D 644223 CDS PAS_chr4_0380 254573396 8200988 complement(766292..766972) 1 NC_012966.1 hypothetical protein 766972 8200988 PAS_chr4_0380 Pichia pastoris GS115 hypothetical protein XP_002493807.1 766292 R 644223 CDS PAS_chr4_0381 254573398 8200665 complement(767222..767821) 1 NC_012966.1 Putative protein of unknown function 767821 8200665 PAS_chr4_0381 Pichia pastoris GS115 Putative protein of unknown function XP_002493808.1 767222 R 644223 CDS PAS_chr4_0382 254573400 8200666 768005..769636 1 NC_012966.1 Mitochondrial protein of unknown function 769636 8200666 PAS_chr4_0382 Pichia pastoris GS115 Mitochondrial protein of unknown function XP_002493809.1 768005 D 644223 CDS PAS_chr4_0383 254573402 8200667 complement(769717..770241) 1 NC_012966.1 hypothetical protein 770241 8200667 PAS_chr4_0383 Pichia pastoris GS115 hypothetical protein XP_002493810.1 769717 R 644223 CDS PAS_chr4_0384 254573404 8200668 complement(770764..771966) 1 NC_012966.1 hypothetical protein 771966 8200668 PAS_chr4_0384 Pichia pastoris GS115 hypothetical protein XP_002493811.1 770764 R 644223 CDS PAS_chr4_0385 254573406 8200669 772871..773860 1 NC_012966.1 hypothetical protein 773860 8200669 PAS_chr4_0385 Pichia pastoris GS115 hypothetical protein XP_002493812.1 772871 D 644223 CDS PAS_chr4_0386 254573408 8200670 complement(773857..775206) 1 NC_012966.1 Gamma subunit of the translation initiation factor eIF2B 775206 8200670 PAS_chr4_0386 Pichia pastoris GS115 Gamma subunit of the translation initiation factor eIF2B XP_002493813.1 773857 R 644223 CDS PAS_chr4_0387 254573410 8200671 775381..776631 1 NC_012966.1 One of six ATPases of the 19S regulatory particle of the 26S proteasome 776631 8200671 PAS_chr4_0387 Pichia pastoris GS115 One of six ATPases of the 19S regulatory particle of the 26S proteasome XP_002493814.1 775381 D 644223 CDS PAS_chr4_0956 254573412 8200672 complement(776764..777696) 1 NC_012966.1 hypothetical protein 777696 8200672 PAS_chr4_0956 Pichia pastoris GS115 hypothetical protein XP_002493815.1 776764 R 644223 CDS PAS_chr4_0388 254573414 8200989 complement(join(777873..778026,778178..778434,778504..778578)) 1 NC_012966.1 Mitochondrial ribosomal protein of the large subunit 778578 8200989 PAS_chr4_0388 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002493816.1 777873 R 644223 CDS PAS_chr4_0389 254573416 8200673 778720..781380 1 NC_012966.1 Large subunit of the dynactin complex 781380 8200673 PAS_chr4_0389 Pichia pastoris GS115 Large subunit of the dynactin complex XP_002493817.1 778720 D 644223 CDS PAS_chr4_0390 254573418 8200674 782419..784008 1 NC_012966.1 hypothetical protein 784008 8200674 PAS_chr4_0390 Pichia pastoris GS115 hypothetical protein XP_002493818.1 782419 D 644223 CDS PAS_chr4_0391 254573420 8200675 784238..785407 1 NC_012966.1 Component of the TOM (translocase of outer membrane) complex 785407 8200675 PAS_chr4_0391 Pichia pastoris GS115 Component of the TOM (translocase of outer membrane) complex XP_002493819.1 784238 D 644223 CDS PAS_chr4_0957 254573422 8200676 complement(785433..786053) 1 NC_012966.1 hypothetical protein 786053 8200676 PAS_chr4_0957 Pichia pastoris GS115 hypothetical protein XP_002493820.1 785433 R 644223 CDS PAS_chr4_0392 254573424 8200990 786069..787031 1 NC_012966.1 Protein with similarity to oxidoreductases, found in lipid particles 787031 8200990 PAS_chr4_0392 Pichia pastoris GS115 Protein with similarity to oxidoreductases, found in lipid particles XP_002493821.1 786069 D 644223 CDS PAS_chr4_0393 254573426 8200677 complement(join(787061..790315,790419..790457)) 1 NC_012966.1 Cytosolic leucyl tRNA synthetase, ligates leucine to the appropriate tRNA 790457 8200677 PAS_chr4_0393 Pichia pastoris GS115 Cytosolic leucyl tRNA synthetase, ligates leucine to the appropriate tRNA XP_002493822.1 787061 R 644223 CDS PAS_chr4_0394 254573428 8200678 complement(790655..792451) 1 NC_012966.1 Poly(A)RNA binding protein involved in nuclear mRNA export 792451 8200678 PAS_chr4_0394 Pichia pastoris GS115 Poly(A)RNA binding protein involved in nuclear mRNA export XP_002493823.1 790655 R 644223 CDS PAS_chr4_0395 254573430 8200679 792686..794680 1 NC_012966.1 Essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p) 794680 8200679 PAS_chr4_0395 Pichia pastoris GS115 Essential subunit of Sec63 complex (Sec63p, Sec62p, Sec66p and Sec72p) XP_002493824.1 792686 D 644223 CDS PAS_chr4_0396 254573432 8200680 complement(795394..795864) 1 NC_012966.1 Heme-binding protein involved in regulation of cytochrome P450 protein Erg11p 795864 8200680 PAS_chr4_0396 Pichia pastoris GS115 Heme-binding protein involved in regulation of cytochrome P450 protein Erg11p XP_002493825.1 795394 R 644223 CDS PAS_chr4_0397 254573434 8200681 796040..796606 1 NC_012966.1 hypothetical protein 796606 8200681 PAS_chr4_0397 Pichia pastoris GS115 hypothetical protein XP_002493826.1 796040 D 644223 CDS PAS_chr4_0398 254573436 8200682 complement(796614..797438) 1 NC_012966.1 Delta 1-pyrroline-5-carboxylate reductase, catalyzes the last step in proline biosynthesis 797438 8200682 PAS_chr4_0398 Pichia pastoris GS115 Delta 1-pyrroline-5-carboxylate reductase, catalyzes the last step in proline biosynthesis XP_002493827.1 796614 R 644223 CDS PAS_chr4_0399 254573438 8200683 complement(797604..799730) 1 NC_012966.1 Ferric reductase and cupric reductase 799730 8200683 PAS_chr4_0399 Pichia pastoris GS115 Ferric reductase and cupric reductase XP_002493828.1 797604 R 644223 CDS PAS_chr4_0401 254573440 8200684 complement(801336..802757) 1 NC_012966.1 Arginyl-tRNA-protein transferase 802757 8200684 PAS_chr4_0401 Pichia pastoris GS115 Arginyl-tRNA-protein transferase XP_002493829.1 801336 R 644223 CDS PAS_chr4_0402 254573442 8200685 complement(803100..803873) 1 NC_012966.1 Beta regulatory subunit of casein kinase 2, a Ser/Thr protein kinase 803873 8200685 PAS_chr4_0402 Pichia pastoris GS115 Beta regulatory subunit of casein kinase 2, a Ser/Thr protein kinase XP_002493830.1 803100 R 644223 CDS PAS_chr4_0403 254573444 8200686 804100..804696 1 NC_012966.1 hypothetical protein 804696 8200686 PAS_chr4_0403 Pichia pastoris GS115 hypothetical protein XP_002493831.1 804100 D 644223 CDS PAS_chr4_0404 254573446 8200687 complement(804762..806801) 1 NC_012966.1 Protein kinase 806801 8200687 PAS_chr4_0404 Pichia pastoris GS115 Protein kinase XP_002493832.1 804762 R 644223 CDS PAS_chr4_0405 254573448 8200688 complement(807214..808248) 1 NC_012966.1 Guanine nucleotide exchange factor for Gpa1p 808248 8200688 PAS_chr4_0405 Pichia pastoris GS115 Guanine nucleotide exchange factor for Gpa1p XP_002493833.1 807214 R 644223 CDS PAS_chr4_0406 254573450 8200689 808417..808692 1 NC_012966.1 hypothetical protein 808692 8200689 PAS_chr4_0406 Pichia pastoris GS115 hypothetical protein XP_002493834.1 808417 D 644223 CDS PAS_chr4_0407 254573452 8200690 809530..809841 1 NC_012966.1 Protein of unknown function that associates with ribosomes 809841 8200690 PAS_chr4_0407 Pichia pastoris GS115 Protein of unknown function that associates with ribosomes XP_002493835.1 809530 D 644223 CDS PAS_chr4_0408 254573454 8200691 complement(809886..810902) 1 NC_012966.1 Choline phosphate cytidylyltransferase 810902 8200691 PAS_chr4_0408 Pichia pastoris GS115 Choline phosphate cytidylyltransferase XP_002493836.1 809886 R 644223 CDS PAS_chr4_0409 254573456 8200692 811148..811702 1 NC_012966.1 hypothetical protein 811702 8200692 PAS_chr4_0409 Pichia pastoris GS115 hypothetical protein XP_002493837.1 811148 D 644223 CDS PAS_chr4_0410 254573458 8200693 811878..813266 1 NC_012966.1 hypothetical protein 813266 8200693 PAS_chr4_0410 Pichia pastoris GS115 hypothetical protein XP_002493838.1 811878 D 644223 CDS PAS_chr4_0411 254573460 8200694 813508..814953 1 NC_012966.1 hypothetical protein 814953 8200694 PAS_chr4_0411 Pichia pastoris GS115 hypothetical protein XP_002493839.1 813508 D 644223 CDS PAS_chr4_0412 254573462 8200695 815079..815399 1 NC_012966.1 Ribosomal stalk protein P1 alpha 815399 8200695 PAS_chr4_0412 Pichia pastoris GS115 Ribosomal stalk protein P1 alpha XP_002493840.1 815079 D 644223 CDS PAS_chr4_0413 254573464 8200696 complement(join(815730..816319,816407..816410)) 1 NC_012966.1 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl13Bp 816410 8200696 PAS_chr4_0413 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl13Bp XP_002493841.1 815730 R 644223 CDS PAS_chr4_0414 254573466 8200697 join(816923..816958,817101..817508) 1 NC_012966.1 Protein component of the small (40S) ribosomal subunit 817508 8200697 PAS_chr4_0414 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002493842.1 816923 D 644223 CDS PAS_chr4_0415 254573468 8200698 818192..819604 1 NC_012966.1 Cytosolic serine hydroxymethyltransferase 819604 8200698 PAS_chr4_0415 Pichia pastoris GS115 Cytosolic serine hydroxymethyltransferase XP_002493843.1 818192 D 644223 CDS PAS_chr4_0416 254573470 8200699 complement(819647..820888) 1 NC_012966.1 Alanine:glyoxylate aminotransferase (AGT), catalyzes the synthesis of glycine from glyoxylate 820888 8200699 PAS_chr4_0416 Pichia pastoris GS115 Alanine:glyoxylate aminotransferase (AGT), catalyzes the synthesis of glycine from glyoxylate XP_002493844.1 819647 R 644223 CDS PAS_chr4_0417 254573472 8200700 complement(821021..821869) 1 NC_012966.1 hypothetical protein 821869 8200700 PAS_chr4_0417 Pichia pastoris GS115 hypothetical protein XP_002493845.1 821021 R 644223 CDS PAS_chr4_0418 254573474 8200701 822075..823100 1 NC_012966.1 Delta-aminolevulinate dehydratase, a homo-octameric enzyme 823100 8200701 PAS_chr4_0418 Pichia pastoris GS115 Delta-aminolevulinate dehydratase, a homo-octameric enzyme XP_002493846.1 822075 D 644223 CDS PAS_chr4_0419 254573476 8200702 complement(823173..825629) 1 NC_012966.1 Putative ATPase of the AAA family 825629 8200702 PAS_chr4_0419 Pichia pastoris GS115 Putative ATPase of the AAA family XP_002493847.1 823173 R 644223 CDS PAS_chr4_0420 254573478 8200703 825974..826588 1 NC_012966.1 Myristoylated subunit of ESCRTIII 826588 8200703 PAS_chr4_0420 Pichia pastoris GS115 Myristoylated subunit of ESCRTIII XP_002493848.1 825974 D 644223 CDS PAS_chr4_0421 254573480 8200704 complement(join(826624..828494,828565..828577)) 1 NC_012966.1 Protein of unknown function, required for cell growth and possibly involved in rRNA processing 828577 8200704 PAS_chr4_0421 Pichia pastoris GS115 Protein of unknown function, required for cell growth and possibly involved in rRNA processing XP_002493849.1 826624 R 644223 CDS PAS_chr4_0422 254573482 8200705 828787..829029 1 NC_012966.1 Subunit VIb of cytochrome c oxidase 829029 8200705 PAS_chr4_0422 Pichia pastoris GS115 Subunit VIb of cytochrome c oxidase XP_002493850.1 828787 D 644223 CDS PAS_chr4_0958 254573484 8200706 complement(829205..829819) 1 NC_012966.1 hypothetical protein 829819 8200706 PAS_chr4_0958 Pichia pastoris GS115 hypothetical protein XP_002493851.1 829205 R 644223 CDS PAS_chr4_0959 254573486 8200991 complement(830037..831374) 1 NC_012966.1 hypothetical protein 831374 8200991 PAS_chr4_0959 Pichia pastoris GS115 hypothetical protein XP_002493852.1 830037 R 644223 CDS PAS_chr4_0423 254573488 8200992 complement(join(831653..832405,832798..833604)) 1 NC_012966.1 Putative GTPase that associates with pre-60S ribosomal subunits in the nucleolus 833604 8200992 PAS_chr4_0423 Pichia pastoris GS115 Putative GTPase that associates with pre-60S ribosomal subunits in the nucleolus XP_002493853.1 831653 R 644223 CDS PAS_chr4_0424 254573490 8200707 833792..834403 1 NC_012966.1 hypothetical protein 834403 8200707 PAS_chr4_0424 Pichia pastoris GS115 hypothetical protein XP_002493854.1 833792 D 644223 CDS PAS_chr4_0425 254573492 8200708 complement(834487..835389) 1 NC_012966.1 hypothetical protein 835389 8200708 PAS_chr4_0425 Pichia pastoris GS115 hypothetical protein XP_002493855.1 834487 R 644223 CDS PAS_chr4_0426 254573494 8200709 835556..836278 1 NC_012966.1 hypothetical protein 836278 8200709 PAS_chr4_0426 Pichia pastoris GS115 hypothetical protein XP_002493856.1 835556 D 644223 CDS PAS_chr4_0960 254573496 8200710 836588..837307 1 NC_012966.1 hypothetical protein 837307 8200710 PAS_chr4_0960 Pichia pastoris GS115 hypothetical protein XP_002493857.1 836588 D 644223 CDS PAS_chr4_0427 254573498 8200993 837595..838197 1 NC_012966.1 Evolutionarily conserved protein with similarity to Orm2p 838197 8200993 PAS_chr4_0427 Pichia pastoris GS115 Evolutionarily conserved protein with similarity to Orm2p XP_002493858.1 837595 D 644223 CDS PAS_chr4_0429 254573500 8200711 complement(841200..841916) 1 NC_012966.1 Ubiquitin-conjugating enzyme that mediates selective degradation of short-lived and abnormal protein 841916 8200711 PAS_chr4_0429 Pichia pastoris GS115 Ubiquitin-conjugating enzyme that mediates selective degradation of short-lived and abnormal protein XP_002493859.1 841200 R 644223 CDS PAS_chr4_0430 254573502 8200712 complement(842113..843348) 1 NC_012966.1 Endosomal protein that regulates cell polarity, controls polarized growth 843348 8200712 PAS_chr4_0430 Pichia pastoris GS115 Endosomal protein that regulates cell polarity, controls polarized growth XP_002493860.1 842113 R 644223 CDS PAS_chr4_0431 254573504 8200713 complement(843539..849475) 1 NC_012966.1 Component of the CCR4-NOT complex, which has multiple roles in regulating mRNA levels 849475 8200713 PAS_chr4_0431 Pichia pastoris GS115 Component of the CCR4-NOT complex, which has multiple roles in regulating mRNA levels XP_002493861.1 843539 R 644223 CDS PAS_chr4_0432 254573506 8200714 850836..852275 1 NC_012966.1 Integral membrane component of endoplasmic reticulum-derived COPII-coated vesicles 852275 8200714 PAS_chr4_0432 Pichia pastoris GS115 Integral membrane component of endoplasmic reticulum-derived COPII-coated vesicles XP_002493862.1 850836 D 644223 CDS PAS_chr4_0433 254573508 8200715 complement(853218..854117) 1 NC_012966.1 NADPH-dependent alpha-keto amide reductase 854117 8200715 PAS_chr4_0433 Pichia pastoris GS115 NADPH-dependent alpha-keto amide reductase XP_002493863.1 853218 R 644223 CDS PAS_chr4_0434 254573510 8200716 855536..856402 1 NC_012966.1 Subunit of the core complex of translation initiation factor 3(eIF3) 856402 8200716 PAS_chr4_0434 Pichia pastoris GS115 Subunit of the core complex of translation initiation factor 3(eIF3) XP_002493864.1 855536 D 644223 CDS PAS_chr4_0435 254573512 8200717 complement(856753..857484) 1 NC_012966.1 Subunit of the RNA polymerase II mediator complex 857484 8200717 PAS_chr4_0435 Pichia pastoris GS115 Subunit of the RNA polymerase II mediator complex XP_002493865.1 856753 R 644223 CDS PAS_chr4_0436 254573514 8200718 join(857861..857996,858047..858168,858222..858320) 1 NC_012966.1 RING finger containing subunit of Skp1-Cullin-F-box ubiquitin protein ligases (SCF) 858320 8200718 PAS_chr4_0436 Pichia pastoris GS115 RING finger containing subunit of Skp1-Cullin-F-box ubiquitin protein ligases (SCF) XP_002493866.1 857861 D 644223 CDS PAS_chr4_0437 254573516 8200719 complement(join(858367..859218,859270..859317)) 1 NC_012966.1 Prephenate dehydratase, catalyzes the conversion of prephanate to phenylpyruvate 859317 8200719 PAS_chr4_0437 Pichia pastoris GS115 Prephenate dehydratase, catalyzes the conversion of prephanate to phenylpyruvate XP_002493867.1 858367 R 644223 CDS PAS_chr4_0961 254573518 8200720 complement(859504..861216) 1 NC_012966.1 hypothetical protein 861216 8200720 PAS_chr4_0961 Pichia pastoris GS115 hypothetical protein XP_002493868.1 859504 R 644223 CDS PAS_chr4_0438 254573520 8200994 861379..861888 1 NC_012966.1 Heat shock protein with a zinc finger motif 861888 8200994 PAS_chr4_0438 Pichia pastoris GS115 Heat shock protein with a zinc finger motif XP_002493869.1 861379 D 644223 CDS PAS_chr4_0439 254573522 8200721 complement(861962..864016) 1 NC_012966.1 Plasma membrane transporter for both urea and polyamines 864016 8200721 PAS_chr4_0439 Pichia pastoris GS115 Plasma membrane transporter for both urea and polyamines XP_002493870.1 861962 R 644223 CDS PAS_chr4_0962 254573524 8200722 864925..866952 1 NC_012966.1 hypothetical protein 866952 8200722 PAS_chr4_0962 Pichia pastoris GS115 hypothetical protein XP_002493871.1 864925 D 644223 CDS PAS_chr4_0440 254573526 8200995 867165..868412 1 NC_012966.1 hypothetical protein 868412 8200995 PAS_chr4_0440 Pichia pastoris GS115 hypothetical protein XP_002493872.1 867165 D 644223 CDS PAS_chr4_0441 254573528 8200723 complement(868455..871775) 1 NC_012966.1 ATP-dependent Lon protease, involved in degradation of misfolded proteins in mitochondria 871775 8200723 PAS_chr4_0441 Pichia pastoris GS115 ATP-dependent Lon protease, involved in degradation of misfolded proteins in mitochondria XP_002493873.1 868455 R 644223 CDS PAS_chr4_0442 254573530 8200724 complement(871989..872894) 1 NC_012966.1 Subunit of the heme-activated, glucose-repressed Hap2p/3p/4p/5p CCAAT-binding complex 872894 8200724 PAS_chr4_0442 Pichia pastoris GS115 Subunit of the heme-activated, glucose-repressed Hap2p/3p/4p/5p CCAAT-binding complex XP_002493874.1 871989 R 644223 CDS PAS_chr4_0443 254573532 8200725 873173..874786 1 NC_012966.1 Flippase, essential integral membrane protein that is required for translocation of Man5GlcNac2-PP-D 874786 8200725 PAS_chr4_0443 Pichia pastoris GS115 Flippase, essential integral membrane protein that is required for translocation of Man5GlcNac2-PP-D XP_002493875.1 873173 D 644223 CDS PAS_chr4_0444 254573534 8200726 complement(join(874873..875928,875981..876019)) 1 NC_012966.1 Ubiquitin-protein ligase 876019 8200726 PAS_chr4_0444 Pichia pastoris GS115 Ubiquitin-protein ligase XP_002493876.1 874873 R 644223 CDS PAS_chr4_0445 254573536 8201394 complement(876244..878379) 1 NC_012966.1 S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase 878379 8201394 PAS_chr4_0445 Pichia pastoris GS115 S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase XP_002493877.1 876244 R 644223 CDS PAS_chr4_0446 254573538 8201395 complement(878546..879199) 1 NC_012966.1 hypothetical protein 879199 8201395 PAS_chr4_0446 Pichia pastoris GS115 hypothetical protein XP_002493878.1 878546 R 644223 CDS PAS_chr4_0447 254573540 8201396 879347..879808 1 NC_012966.1 hypothetical protein 879808 8201396 PAS_chr4_0447 Pichia pastoris GS115 hypothetical protein XP_002493879.1 879347 D 644223 CDS PAS_chr4_0448 254573542 8201397 complement(join(879874..880137,880254..880295)) 1 NC_012966.1 Lsm (Like Sm) protein 880295 8201397 PAS_chr4_0448 Pichia pastoris GS115 Lsm (Like Sm) protein XP_002493880.1 879874 R 644223 CDS PAS_chr4_0449 254573544 8201398 complement(880483..882006) 1 NC_012966.1 Protein required for the hydroxylation of heme O to form heme A 882006 8201398 PAS_chr4_0449 Pichia pastoris GS115 Protein required for the hydroxylation of heme O to form heme A XP_002493881.1 880483 R 644223 CDS PAS_chr4_0450 254573546 8201399 complement(882769..884703) 1 NC_012966.1 hypothetical protein 884703 8201399 PAS_chr4_0450 Pichia pastoris GS115 hypothetical protein XP_002493882.1 882769 R 644223 CDS PAS_chr4_0451 254573548 8201400 complement(885282..887240) 1 NC_012966.1 hypothetical protein 887240 8201400 PAS_chr4_0451 Pichia pastoris GS115 hypothetical protein XP_002493883.1 885282 R 644223 CDS PAS_chr4_0452 254573550 8201401 complement(887814..889379) 1 NC_012966.1 Putative protein of unknown function 889379 8201401 PAS_chr4_0452 Pichia pastoris GS115 Putative protein of unknown function XP_002493884.1 887814 R 644223 CDS PAS_chr4_0453 254573552 8201402 889562..890293 1 NC_012966.1 Protein with a role in transcription 890293 8201402 PAS_chr4_0453 Pichia pastoris GS115 Protein with a role in transcription XP_002493885.1 889562 D 644223 CDS PAS_chr4_0454 254573554 8201403 complement(890369..891433) 1 NC_012966.1 hypothetical protein 891433 8201403 PAS_chr4_0454 Pichia pastoris GS115 hypothetical protein XP_002493886.1 890369 R 644223 CDS PAS_chr4_0455 254573556 8201404 891858..892217 1 NC_012966.1 hypothetical protein 892217 8201404 PAS_chr4_0455 Pichia pastoris GS115 hypothetical protein XP_002493887.1 891858 D 644223 CDS PAS_chr4_0456 254573558 8201405 complement(join(892299..892733,892918..892938)) 1 NC_012966.1 Protein component of the small (40S) ribosomal subunit 892938 8201405 PAS_chr4_0456 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002493888.1 892299 R 644223 CDS PAS_chr4_0457 254573560 8201406 join(893527..893565,893632..896079) 1 NC_012966.1 Putative protein kinase of unknown cellular role 896079 8201406 PAS_chr4_0457 Pichia pastoris GS115 Putative protein kinase of unknown cellular role XP_002493889.1 893527 D 644223 CDS PAS_chr4_0963 254573562 8201407 complement(896112..897578) 1 NC_012966.1 hypothetical protein 897578 8201407 PAS_chr4_0963 Pichia pastoris GS115 hypothetical protein XP_002493890.1 896112 R 644223 CDS PAS_chr4_0459 254573564 8200996 897654..898568 1 NC_012966.1 Conserved protein involved in autophagy and the Cvt pathway 898568 8200996 PAS_chr4_0459 Pichia pastoris GS115 Conserved protein involved in autophagy and the Cvt pathway XP_002493891.1 897654 D 644223 CDS PAS_chr4_0460 254573566 8201408 complement(898733..899677) 1 NC_012966.1 Nonessential protein that binds actin filaments and localizes to actin patches and cables 899677 8201408 PAS_chr4_0460 Pichia pastoris GS115 Nonessential protein that binds actin filaments and localizes to actin patches and cables XP_002493892.1 898733 R 644223 CDS PAS_chr4_0461 254573568 8201409 899945..901393 1 NC_012966.1 hypothetical protein 901393 8201409 PAS_chr4_0461 Pichia pastoris GS115 hypothetical protein XP_002493893.1 899945 D 644223 CDS PAS_chr4_0462 254573570 8201410 complement(901649..902761) 1 NC_012966.1 hypothetical protein 902761 8201410 PAS_chr4_0462 Pichia pastoris GS115 hypothetical protein XP_002493894.1 901649 R 644223 CDS PAS_chr4_0463 254573572 8201411 complement(903240..904598) 1 NC_012966.1 hypothetical protein 904598 8201411 PAS_chr4_0463 Pichia pastoris GS115 hypothetical protein XP_002493895.1 903240 R 644223 CDS PAS_chr4_0464 254573574 8201412 complement(904746..907232) 1 NC_012966.1 AdoMet-dependent methyltransferase involved in rRNA processing and 60S ribosomal subunit maturation 907232 8201412 PAS_chr4_0464 Pichia pastoris GS115 AdoMet-dependent methyltransferase involved in rRNA processing and 60S ribosomal subunit maturation XP_002493896.1 904746 R 644223 CDS PAS_chr4_0465 254573576 8201413 907470..908939 1 NC_012966.1 hypothetical protein 908939 8201413 PAS_chr4_0465 Pichia pastoris GS115 hypothetical protein XP_002493897.1 907470 D 644223 CDS PAS_chr4_0467 254573578 8201414 complement(911936..913963) 1 NC_012966.1 hypothetical protein 913963 8201414 PAS_chr4_0467 Pichia pastoris GS115 hypothetical protein XP_002493898.1 911936 R 644223 CDS PAS_chr4_0468 254573580 8201415 914469..915560 1 NC_012966.1 Transcription factor required for gene regulation in repsonse to pheromones 915560 8201415 PAS_chr4_0468 Pichia pastoris GS115 Transcription factor required for gene regulation in repsonse to pheromones XP_002493899.1 914469 D 644223 CDS PAS_chr4_0469 254573582 8201416 complement(915820..916905) 1 NC_012966.1 hypothetical protein 916905 8201416 PAS_chr4_0469 Pichia pastoris GS115 hypothetical protein XP_002493900.1 915820 R 644223 CDS PAS_chr4_0470 254573584 8201417 complement(917779..919338) 1 NC_012966.1 Mitochondrial aldehyde dehydrogenase 919338 8201417 PAS_chr4_0470 Pichia pastoris GS115 Mitochondrial aldehyde dehydrogenase XP_002493901.1 917779 R 644223 CDS PAS_chr4_0471 254573586 8201418 919728..921194 1 NC_012966.1 hypothetical protein 921194 8201418 PAS_chr4_0471 Pichia pastoris GS115 hypothetical protein XP_002493902.1 919728 D 644223 CDS PAS_chr4_0472 254573588 8201419 921370..922719 1 NC_012966.1 Conserved protein involved in exocytic transport from the Golgi 922719 8201419 PAS_chr4_0472 Pichia pastoris GS115 Conserved protein involved in exocytic transport from the Golgi XP_002493903.1 921370 D 644223 CDS PAS_chr4_0964 254573590 8201420 922889..924490 1 NC_012966.1 hypothetical protein 924490 8201420 PAS_chr4_0964 Pichia pastoris GS115 hypothetical protein XP_002493904.1 922889 D 644223 CDS PAS_chr4_0965 254573592 8200997 join(924603..924645,924869..925509) 1 NC_012966.1 hypothetical protein 925509 8200997 PAS_chr4_0965 Pichia pastoris GS115 hypothetical protein XP_002493905.1 924603 D 644223 CDS PAS_chr4_0966 254573594 8200998 complement(925527..927332) 1 NC_012966.1 hypothetical protein 927332 8200998 PAS_chr4_0966 Pichia pastoris GS115 hypothetical protein XP_002493906.1 925527 R 644223 CDS PAS_chr4_0473 254573596 8200999 complement(927503..929569) 1 NC_012966.1 Mitochondrial inner membrane ATP-binding cassette (ABC) transporter 929569 8200999 PAS_chr4_0473 Pichia pastoris GS115 Mitochondrial inner membrane ATP-binding cassette (ABC) transporter XP_002493907.1 927503 R 644223 CDS PAS_chr4_0967 254573598 8201421 complement(930242..932371) 1 NC_012966.1 hypothetical protein 932371 8201421 PAS_chr4_0967 Pichia pastoris GS115 hypothetical protein XP_002493908.1 930242 R 644223 CDS PAS_chr4_0474 254573600 8201000 complement(932530..933726) 1 NC_012966.1 Member of the Sir2 family of NAD(+)-dependent protein deacetylases 933726 8201000 PAS_chr4_0474 Pichia pastoris GS115 Member of the Sir2 family of NAD(+)-dependent protein deacetylases XP_002493909.1 932530 R 644223 CDS PAS_chr4_0475 254573602 8201422 933925..935295 1 NC_012966.1 Essential protein involved in transcription regulation 935295 8201422 PAS_chr4_0475 Pichia pastoris GS115 Essential protein involved in transcription regulation XP_002493910.1 933925 D 644223 CDS PAS_chr4_0968 254573604 8201423 935400..936440 1 NC_012966.1 hypothetical protein 936440 8201423 PAS_chr4_0968 Pichia pastoris GS115 hypothetical protein XP_002493911.1 935400 D 644223 CDS PAS_chr4_0476 254573606 8201001 complement(936453..937766) 1 NC_012966.1 Ribosomal protein lysine methyltransferase 937766 8201001 PAS_chr4_0476 Pichia pastoris GS115 Ribosomal protein lysine methyltransferase XP_002493912.1 936453 R 644223 CDS PAS_chr4_0477 254573608 8201424 938170..938895 1 NC_012966.1 Putative dephospho-CoA kinase (DPCK) that catalyzes the final step in Coenzyme A biosynthesis 938895 8201424 PAS_chr4_0477 Pichia pastoris GS115 Putative dephospho-CoA kinase (DPCK) that catalyzes the final step in Coenzyme A biosynthesis XP_002493913.1 938170 D 644223 CDS PAS_chr4_0478 254573610 8201425 complement(938906..941809) 1 NC_012966.1 Phosphatidylinositol 3-kinase responsible for the synthesis of phosphatidylinositol 3-phosphate 941809 8201425 PAS_chr4_0478 Pichia pastoris GS115 Phosphatidylinositol 3-kinase responsible for the synthesis of phosphatidylinositol 3-phosphate XP_002493914.1 938906 R 644223 CDS PAS_chr4_0479 254573612 8201426 942175..944268 1 NC_012966.1 hypothetical protein 944268 8201426 PAS_chr4_0479 Pichia pastoris GS115 hypothetical protein XP_002493915.1 942175 D 644223 CDS PAS_chr4_0480 254573614 8201427 944382..945056 1 NC_012966.1 hypothetical protein 945056 8201427 PAS_chr4_0480 Pichia pastoris GS115 hypothetical protein XP_002493916.1 944382 D 644223 CDS PAS_chr4_0481 254573616 8201428 complement(945051..946760) 1 NC_012966.1 Protein involved in inhibition of translation and nonsense-mediated decay 946760 8201428 PAS_chr4_0481 Pichia pastoris GS115 Protein involved in inhibition of translation and nonsense-mediated decay XP_002493917.1 945051 R 644223 CDS PAS_chr4_0482 254573618 8201429 946986..949544 1 NC_012966.1 Putative protein of unknown function, may be involved in detoxification 949544 8201429 PAS_chr4_0482 Pichia pastoris GS115 Putative protein of unknown function, may be involved in detoxification XP_002493918.1 946986 D 644223 CDS PAS_chr4_0483 254573620 8201430 complement(949552..950439) 1 NC_012966.1 Protein required for normal intracellular sterol distribution and for sphingolipid metabolism 950439 8201430 PAS_chr4_0483 Pichia pastoris GS115 Protein required for normal intracellular sterol distribution and for sphingolipid metabolism XP_002493919.1 949552 R 644223 CDS PAS_chr4_0484 254573622 8201431 complement(950727..953405) 1 NC_012966.1 Member of the Sec24p family 953405 8201431 PAS_chr4_0484 Pichia pastoris GS115 Member of the Sec24p family XP_002493920.1 950727 R 644223 CDS PAS_chr4_0486 254573624 8201432 955416..956711 1 NC_012966.1 hypothetical protein 956711 8201432 PAS_chr4_0486 Pichia pastoris GS115 hypothetical protein XP_002493921.1 955416 D 644223 CDS PAS_chr4_0487 254573626 8201433 complement(956789..960256) 1 NC_012966.1 Carbon source-responsive zinc-finger transcription factor 960256 8201433 PAS_chr4_0487 Pichia pastoris GS115 Carbon source-responsive zinc-finger transcription factor XP_002493922.1 956789 R 644223 CDS PAS_chr4_0488 254573628 8201434 complement(960926..961780) 1 NC_012966.1 Mitochondrial phosphate carrier, imports inorganic phosphate into mitochondria 961780 8201434 PAS_chr4_0488 Pichia pastoris GS115 Mitochondrial phosphate carrier, imports inorganic phosphate into mitochondria XP_002493923.1 960926 R 644223 CDS PAS_chr4_0489 254573630 8201435 complement(962370..962744) 1 NC_012966.1 hypothetical protein 962744 8201435 PAS_chr4_0489 Pichia pastoris GS115 hypothetical protein XP_002493924.1 962370 R 644223 CDS PAS_chr4_0490 254573632 8201436 join(962805..962812,963025..965323) 1 NC_012966.1 Component of the CCR4-NOT transcriptional complex 965323 8201436 PAS_chr4_0490 Pichia pastoris GS115 Component of the CCR4-NOT transcriptional complex XP_002493925.1 962805 D 644223 CDS PAS_chr4_0492 254573634 8201437 966842..967921 1 NC_012966.1 DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase involved in base excision repair 967921 8201437 PAS_chr4_0492 Pichia pastoris GS115 DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase involved in base excision repair XP_002493926.1 966842 D 644223 CDS PAS_chr4_0493 254573636 8201438 968069..969046 1 NC_012966.1 Putative phosphomutase, contains a region homologous to the active site of phosphomutases 969046 8201438 PAS_chr4_0493 Pichia pastoris GS115 Putative phosphomutase, contains a region homologous to the active site of phosphomutases XP_002493927.1 968069 D 644223 CDS PAS_chr4_0494 254573638 8201439 complement(969039..970943) 1 NC_012966.1 Regulatory subunit A of the heterotrimeric protein phosphatase 2A 970943 8201439 PAS_chr4_0494 Pichia pastoris GS115 Regulatory subunit A of the heterotrimeric protein phosphatase 2A XP_002493928.1 969039 R 644223 CDS PAS_chr4_0495 254573640 8201440 complement(971725..973155) 1 NC_012966.1 hypothetical protein 973155 8201440 PAS_chr4_0495 Pichia pastoris GS115 hypothetical protein XP_002493929.1 971725 R 644223 CDS PAS_chr4_0496 254573642 8201441 973379..973993 1 NC_012966.1 Peroxisomal ubiquitin conjugating enzyme 973993 8201441 PAS_chr4_0496 Pichia pastoris GS115 Peroxisomal ubiquitin conjugating enzyme XP_002493930.1 973379 D 644223 CDS PAS_chr4_0497 254573644 8201442 complement(974000..974875) 1 NC_012966.1 hypothetical protein 974875 8201442 PAS_chr4_0497 Pichia pastoris GS115 hypothetical protein XP_002493931.1 974000 R 644223 CDS PAS_chr4_0969 254573646 8201443 976339..978207 1 NC_012966.1 hypothetical protein 978207 8201443 PAS_chr4_0969 Pichia pastoris GS115 hypothetical protein XP_002493932.1 976339 D 644223 CDS PAS_chr4_0498 254573648 8201002 978688..979752 1 NC_012966.1 Suppressor of sphingoid long chain base (LCB) sensitivity of an LCB-lyase mutation 979752 8201002 PAS_chr4_0498 Pichia pastoris GS115 Suppressor of sphingoid long chain base (LCB) sensitivity of an LCB-lyase mutation XP_002493933.1 978688 D 644223 CDS PAS_chr4_0499 254573650 8201444 complement(979794..982997) 1 NC_012966.1 Part of the evolutionarily-conserved CCR4-NOT transcriptional regulatory complex 982997 8201444 PAS_chr4_0499 Pichia pastoris GS115 Part of the evolutionarily-conserved CCR4-NOT transcriptional regulatory complex XP_002493934.1 979794 R 644223 CDS PAS_chr4_0500 254573652 8201445 983520..984308 1 NC_012966.1 Protein that induces appearance of [PIN+] prion when overproduced 984308 8201445 PAS_chr4_0500 Pichia pastoris GS115 Protein that induces appearance of [PIN+] prion when overproduced XP_002493935.1 983520 D 644223 CDS PAS_chr4_0501 254573654 8201446 complement(984311..986434) 1 NC_012966.1 Protein involved in regulation of mitochondrial expression of subunits 6 (Atp6p) and 8 (Atp8p) 986434 8201446 PAS_chr4_0501 Pichia pastoris GS115 Protein involved in regulation of mitochondrial expression of subunits 6 (Atp6p) and 8 (Atp8p) XP_002493936.1 984311 R 644223 CDS PAS_chr4_0502 254573656 8201447 complement(986583..987002) 1 NC_012966.1 Putative protein of unknown function 987002 8201447 PAS_chr4_0502 Pichia pastoris GS115 Putative protein of unknown function XP_002493937.1 986583 R 644223 CDS PAS_chr4_0503 254573658 8201448 complement(987090..988226) 1 NC_012966.1 hypothetical protein 988226 8201448 PAS_chr4_0503 Pichia pastoris GS115 hypothetical protein XP_002493938.1 987090 R 644223 CDS PAS_chr4_0504 254573660 8201449 988892..989407 1 NC_012966.1 hypothetical protein 989407 8201449 PAS_chr4_0504 Pichia pastoris GS115 hypothetical protein XP_002493939.1 988892 D 644223 CDS PAS_chr4_0505 254573662 8201450 complement(join(989732..990189,990236..990553,990616..990643)) 1 NC_012966.1 Subunit of the prohibitin complex (Phb1p-Phb2p) 990643 8201450 PAS_chr4_0505 Pichia pastoris GS115 Subunit of the prohibitin complex (Phb1p-Phb2p) XP_002493940.1 989732 R 644223 CDS PAS_chr4_0506 254573664 8201451 complement(990791..991549) 1 NC_012966.1 Alpha 3 subunit of the 20S proteasome, the only nonessential 20S subunit 991549 8201451 PAS_chr4_0506 Pichia pastoris GS115 Alpha 3 subunit of the 20S proteasome, the only nonessential 20S subunit XP_002493941.1 990791 R 644223 CDS PAS_chr4_0507 254573666 8201452 991650..992993 1 NC_012966.1 hypothetical protein 992993 8201452 PAS_chr4_0507 Pichia pastoris GS115 hypothetical protein XP_002493942.1 991650 D 644223 CDS PAS_chr4_0508 254573668 8201453 complement(993048..994997) 1 NC_012966.1 Protein required for beta-1,6 glucan biosynthesis 994997 8201453 PAS_chr4_0508 Pichia pastoris GS115 Protein required for beta-1,6 glucan biosynthesis XP_002493943.1 993048 R 644223 CDS PAS_chr4_0510 254573670 8201454 995984..998641 1 NC_012966.1 Transmembrane protein involved in formation of Cvt and autophagic vesicles 998641 8201454 PAS_chr4_0510 Pichia pastoris GS115 Transmembrane protein involved in formation of Cvt and autophagic vesicles XP_002493944.1 995984 D 644223 CDS PAS_chr4_0511 254573672 8201455 complement(998649..999965) 1 NC_012966.1 Mitochondrial beta-keto-acyl synthase with possible role in fatty acid synthesis 999965 8201455 PAS_chr4_0511 Pichia pastoris GS115 Mitochondrial beta-keto-acyl synthase with possible role in fatty acid synthesis XP_002493945.1 998649 R 644223 CDS PAS_chr4_0512 254573674 8201456 1000115..1002577 1 NC_012966.1 Nucleolar protein, forms a complex with Noc4p 1002577 8201456 PAS_chr4_0512 Pichia pastoris GS115 Nucleolar protein, forms a complex with Noc4p XP_002493946.1 1000115 D 644223 CDS PAS_chr4_0513 254573676 8201457 complement(1002603..1004216) 1 NC_012966.1 Subunit of the cytosolic chaperonin Cct ring complex 1004216 8201457 PAS_chr4_0513 Pichia pastoris GS115 Subunit of the cytosolic chaperonin Cct ring complex XP_002493947.1 1002603 R 644223 CDS PAS_chr4_0970 254573678 8201458 complement(1004365..1006344) 1 NC_012966.1 hypothetical protein 1006344 8201458 PAS_chr4_0970 Pichia pastoris GS115 hypothetical protein XP_002493948.1 1004365 R 644223 CDS PAS_chr4_0514 254573680 8201003 complement(1006621..1008180) 1 NC_012966.1 Purine-cytosine permease 1008180 8201003 PAS_chr4_0514 Pichia pastoris GS115 Purine-cytosine permease XP_002493949.1 1006621 R 644223 CDS PAS_chr4_0516 254573682 8201459 1009767..1010855 1 NC_012966.1 Low-affinity zinc transporter of the plasma membrane 1010855 8201459 PAS_chr4_0516 Pichia pastoris GS115 Low-affinity zinc transporter of the plasma membrane XP_002493950.1 1009767 D 644223 CDS PAS_chr4_0517 254573684 8201460 complement(join(1011250..1011513,1011562..1011612)) 1 NC_012966.1 Putative protein of unknown function 1011612 8201460 PAS_chr4_0517 Pichia pastoris GS115 Putative protein of unknown function XP_002493951.1 1011250 R 644223 CDS PAS_chr4_0518 254573686 8201461 1011803..1013383 1 NC_012966.1 TFIIF (Transcription Factor II) largest subunit 1013383 8201461 PAS_chr4_0518 Pichia pastoris GS115 TFIIF (Transcription Factor II) largest subunit XP_002493952.1 1011803 D 644223 CDS PAS_chr4_0519 254573688 8201462 complement(1013411..1014520) 1 NC_012966.1 Nonessential protein of unknown function 1014520 8201462 PAS_chr4_0519 Pichia pastoris GS115 Nonessential protein of unknown function XP_002493953.1 1013411 R 644223 CDS PAS_chr4_0520 254573690 8201463 1014736..1014945 1 NC_012966.1 hypothetical protein 1014945 8201463 PAS_chr4_0520 Pichia pastoris GS115 hypothetical protein XP_002493954.1 1014736 D 644223 CDS PAS_chr4_0521 254573692 8201464 1015577..1021135 1 NC_012966.1 Ubiquitin-protein ligase (E3) that interacts with Rad6p/Ubc2p 1021135 8201464 PAS_chr4_0521 Pichia pastoris GS115 Ubiquitin-protein ligase (E3) that interacts with Rad6p/Ubc2p XP_002493955.1 1015577 D 644223 CDS PAS_chr4_0522 254573694 8201465 complement(1021168..1022382) 1 NC_012966.1 Cytoplasmic tyrosyl-tRNA synthetase, class I aminoacyl-tRNA synthetase 1022382 8201465 PAS_chr4_0522 Pichia pastoris GS115 Cytoplasmic tyrosyl-tRNA synthetase, class I aminoacyl-tRNA synthetase XP_002493956.1 1021168 R 644223 CDS PAS_chr4_0524 254573696 8201466 complement(1025620..1026390) 1 NC_012966.1 Ribosomal protein 10 (rp10) of the small (40S) subunit 1026390 8201466 PAS_chr4_0524 Pichia pastoris GS115 Ribosomal protein 10 (rp10) of the small (40S) subunit XP_002493957.1 1025620 R 644223 CDS PAS_chr4_0525 254573698 8201467 1026761..1027420 1 NC_012966.1 GTP-binding protein of the ras superfamily involved in termination of M-phase 1027420 8201467 PAS_chr4_0525 Pichia pastoris GS115 GTP-binding protein of the ras superfamily involved in termination of M-phase XP_002493958.1 1026761 D 644223 CDS PAS_chr4_0526 254573700 8201468 complement(1027431..1029539) 1 NC_012966.1 Largest subunit of the origin recognition complex 1029539 8201468 PAS_chr4_0526 Pichia pastoris GS115 Largest subunit of the origin recognition complex XP_002493959.1 1027431 R 644223 CDS PAS_chr4_0527 254573702 8201469 1029726..1030973 1 NC_012966.1 Non-essential putative integral membrane protein 1030973 8201469 PAS_chr4_0527 Pichia pastoris GS115 Non-essential putative integral membrane protein XP_002493960.1 1029726 D 644223 CDS PAS_chr4_0971 254573704 8201470 1031096..1032286 1 NC_012966.1 hypothetical protein 1032286 8201470 PAS_chr4_0971 Pichia pastoris GS115 hypothetical protein XP_002493961.1 1031096 D 644223 CDS PAS_chr4_0528 254573706 8201004 complement(1032283..1032819) 1 NC_012966.1 mRNA transport regulator, essential nuclear protein 1032819 8201004 PAS_chr4_0528 Pichia pastoris GS115 mRNA transport regulator, essential nuclear protein XP_002493962.1 1032283 R 644223 CDS PAS_chr4_0972 254573708 8201471 complement(1033022..1033606) 1 NC_012966.1 hypothetical protein 1033606 8201471 PAS_chr4_0972 Pichia pastoris GS115 hypothetical protein XP_002493963.1 1033022 R 644223 CDS PAS_chr4_0529 254573710 8201005 1034536..1035246 1 NC_012966.1 hypothetical protein 1035246 8201005 PAS_chr4_0529 Pichia pastoris GS115 hypothetical protein XP_002493964.1 1034536 D 644223 CDS PAS_chr4_0973 254573712 8201393 complement(1035247..1036218) 1 NC_012966.1 hypothetical protein 1036218 8201393 PAS_chr4_0973 Pichia pastoris GS115 hypothetical protein XP_002493965.1 1035247 R 644223 CDS PAS_chr4_0974 254573714 8201006 complement(join(1036349..1036792,1036878..1037591)) 1 NC_012966.1 hypothetical protein 1037591 8201006 PAS_chr4_0974 Pichia pastoris GS115 hypothetical protein XP_002493966.1 1036349 R 644223 CDS PAS_chr4_0975 254573716 8201007 complement(1037673..1037849) 1 NC_012966.1 hypothetical protein 1037849 8201007 PAS_chr4_0975 Pichia pastoris GS115 hypothetical protein XP_002493967.1 1037673 R 644223 CDS PAS_chr4_0530 254573718 8201008 complement(1038214..1039269) 1 NC_012966.1 Cytosolic aspartate aminotransferase, involved in nitrogen metabolism 1039269 8201008 PAS_chr4_0530 Pichia pastoris GS115 Cytosolic aspartate aminotransferase, involved in nitrogen metabolism XP_002493968.1 1038214 R 644223 CDS PAS_chr4_0531 254573720 8201281 1039694..1041664 1 NC_012966.1 Putative protein of unknown function with similarity to F-box proteins 1041664 8201281 PAS_chr4_0531 Pichia pastoris GS115 Putative protein of unknown function with similarity to F-box proteins XP_002493969.1 1039694 D 644223 CDS PAS_chr4_0976 254573722 8201282 1041839..1043788 1 NC_012966.1 hypothetical protein 1043788 8201282 PAS_chr4_0976 Pichia pastoris GS115 hypothetical protein XP_002493970.1 1041839 D 644223 CDS PAS_chr4_0532 254573724 8201009 complement(1043796..1045652) 1 NC_012966.1 Permease of basic amino acids in the vacuolar membrane 1045652 8201009 PAS_chr4_0532 Pichia pastoris GS115 Permease of basic amino acids in the vacuolar membrane XP_002493971.1 1043796 R 644223 CDS PAS_chr4_0533 254573726 8201283 join(1046081..1046092,1046258..1047559) 1 NC_012966.1 Beta-tubulin 1047559 8201283 PAS_chr4_0533 Pichia pastoris GS115 Beta-tubulin XP_002493972.1 1046081 D 644223 CDS PAS_chr4_0534 254573728 8201284 1048043..1051144 1 NC_012966.1 hypothetical protein 1051144 8201284 PAS_chr4_0534 Pichia pastoris GS115 hypothetical protein XP_002493973.1 1048043 D 644223 CDS PAS_chr4_0535 254573730 8201285 complement(1051184..1051552) 1 NC_012966.1 hypothetical protein 1051552 8201285 PAS_chr4_0535 Pichia pastoris GS115 hypothetical protein XP_002493974.1 1051184 R 644223 CDS PAS_chr4_0536 254573732 8201286 1052241..1053074 1 NC_012966.1 hypothetical protein 1053074 8201286 PAS_chr4_0536 Pichia pastoris GS115 hypothetical protein XP_002493975.1 1052241 D 644223 CDS PAS_chr4_0537 254573734 8200805 complement(1053109..1054650) 1 NC_012966.1 Essential nuclear protein involved in early steps of ribosome biogenesis 1054650 8200805 PAS_chr4_0537 Pichia pastoris GS115 Essential nuclear protein involved in early steps of ribosome biogenesis XP_002493976.1 1053109 R 644223 CDS PAS_chr4_0538 254573736 8200806 1054803..1057499 1 NC_012966.1 Splicing factor, component of the U4/U6-U5 snRNP complex 1057499 8200806 PAS_chr4_0538 Pichia pastoris GS115 Splicing factor, component of the U4/U6-U5 snRNP complex XP_002493977.1 1054803 D 644223 CDS PAS_chr4_0539 254573738 8200807 1057683..1059179 1 NC_012966.1 hypothetical protein 1059179 8200807 PAS_chr4_0539 Pichia pastoris GS115 hypothetical protein XP_002493978.1 1057683 D 644223 CDS PAS_chr4_0540 254573740 8200808 1060038..1062701 1 NC_012966.1 Zinc cluster transcriptional activator 1062701 8200808 PAS_chr4_0540 Pichia pastoris GS115 Zinc cluster transcriptional activator XP_002493979.1 1060038 D 644223 CDS PAS_chr4_0541 254573742 8200809 complement(1062814..1065324) 1 NC_012966.1 Protein that forms a complex with the Sit4p protein phosphatase and is required for its function 1065324 8200809 PAS_chr4_0541 Pichia pastoris GS115 Protein that forms a complex with the Sit4p protein phosphatase and is required for its function XP_002493980.1 1062814 R 644223 CDS PAS_chr4_0542 254573744 8200810 complement(1065825..1067936) 1 NC_012966.1 Member of the ChAPs family of proteins (Chs5p-Arf1p-binding proteins: Bch1p, Bch2p, Bud7p, Chs6p) 1067936 8200810 PAS_chr4_0542 Pichia pastoris GS115 Member of the ChAPs family of proteins (Chs5p-Arf1p-binding proteins: Bch1p, Bch2p, Bud7p, Chs6p) XP_002493981.1 1065825 R 644223 CDS PAS_chr4_0543 254573746 8200811 complement(1068142..1069275) 1 NC_012966.1 Putative protein of unknown function, deletion confers reduced fitness in saline 1069275 8200811 PAS_chr4_0543 Pichia pastoris GS115 Putative protein of unknown function, deletion confers reduced fitness in saline XP_002493982.1 1068142 R 644223 CDS PAS_chr4_0544 254573748 8200812 1069391..1070974 1 NC_012966.1 Alpha-1,6-mannosyltransferase localized to the ER 1070974 8200812 PAS_chr4_0544 Pichia pastoris GS115 Alpha-1,6-mannosyltransferase localized to the ER XP_002493983.1 1069391 D 644223 CDS PAS_chr4_0545 254573750 8200813 complement(1070986..1071777) 1 NC_012966.1 Peptidyl-prolyl cis-trans isomerase (cyclophilin) of the endoplasmic reticulum 1071777 8200813 PAS_chr4_0545 Pichia pastoris GS115 Peptidyl-prolyl cis-trans isomerase (cyclophilin) of the endoplasmic reticulum XP_002493984.1 1070986 R 644223 CDS PAS_chr4_0546 254573752 8200814 1071945..1075100 1 NC_012966.1 Putative metalloprotease 1075100 8200814 PAS_chr4_0546 Pichia pastoris GS115 Putative metalloprotease XP_002493985.1 1071945 D 644223 CDS PAS_chr4_0547 254573754 8200815 complement(1075306..1075845) 1 NC_012966.1 hypothetical protein 1075845 8200815 PAS_chr4_0547 Pichia pastoris GS115 hypothetical protein XP_002493986.1 1075306 R 644223 CDS PAS_chr4_0548 254573756 8200816 complement(1075962..1077386) 1 NC_012966.1 Component of the septin ring of the mother-bud neck that is required for cytokinesis 1077386 8200816 PAS_chr4_0548 Pichia pastoris GS115 Component of the septin ring of the mother-bud neck that is required for cytokinesis XP_002493987.1 1075962 R 644223 CDS PAS_chr4_0549 254573758 8200817 1077597..1078748 1 NC_012966.1 hypothetical protein 1078748 8200817 PAS_chr4_0549 Pichia pastoris GS115 hypothetical protein XP_002493988.1 1077597 D 644223 CDS PAS_chr4_0550 254573760 8200818 complement(1078782..1079768) 1 NC_012966.1 Putative protein of unknown function 1079768 8200818 PAS_chr4_0550 Pichia pastoris GS115 Putative protein of unknown function XP_002493989.1 1078782 R 644223 CDS PAS_chr4_0551 254573762 8200819 1080151..1081002 1 NC_012966.1 hypothetical protein 1081002 8200819 PAS_chr4_0551 Pichia pastoris GS115 hypothetical protein XP_002493990.1 1080151 D 644223 CDS PAS_chr4_0552 254573764 8200820 1081350..1083287 1 NC_012966.1 ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport 1083287 8200820 PAS_chr4_0552 Pichia pastoris GS115 ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport XP_002493991.1 1081350 D 644223 CDS PAS_chr4_0553 254573766 8200821 1083554..1086013 1 NC_012966.1 hypothetical protein 1086013 8200821 PAS_chr4_0553 Pichia pastoris GS115 hypothetical protein XP_002493992.1 1083554 D 644223 CDS PAS_chr4_0554 254573768 8200822 1086320..1086754 1 NC_012966.1 hypothetical protein 1086754 8200822 PAS_chr4_0554 Pichia pastoris GS115 hypothetical protein XP_002493993.1 1086320 D 644223 CDS PAS_chr4_0555 254573770 8200823 complement(1086766..1089897) 1 NC_012966.1 Single-stranded DNA endonuclease, cleaves single-stranded DNA during nucleotide excision repair 1089897 8200823 PAS_chr4_0555 Pichia pastoris GS115 Single-stranded DNA endonuclease, cleaves single-stranded DNA during nucleotide excision repair XP_002493994.1 1086766 R 644223 CDS PAS_chr4_0556 254573772 8200824 join(1090065..1090193,1090253..1090996) 1 NC_012966.1 hypothetical protein 1090996 8200824 PAS_chr4_0556 Pichia pastoris GS115 hypothetical protein XP_002493995.1 1090065 D 644223 CDS PAS_chr4_0557 254573774 8200825 1091023..1092387 1 NC_012966.1 Mitochondrial outer membrane protein, component of the Mdm10-Mdm12-Mmm1 complex 1092387 8200825 PAS_chr4_0557 Pichia pastoris GS115 Mitochondrial outer membrane protein, component of the Mdm10-Mdm12-Mmm1 complex XP_002493996.1 1091023 D 644223 CDS PAS_chr4_0558 254573776 8200826 complement(1092389..1093309) 1 NC_012966.1 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA 1093309 8200826 PAS_chr4_0558 Pichia pastoris GS115 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA XP_002493997.1 1092389 R 644223 CDS PAS_chr4_0559 254573778 8200827 complement(1093472..1094881) 1 NC_012966.1 Putative chitin transglycosidase, cell wall protein 1094881 8200827 PAS_chr4_0559 Pichia pastoris GS115 Putative chitin transglycosidase, cell wall protein XP_002493998.1 1093472 R 644223 CDS PAS_chr4_0560 254573780 8200828 complement(join(1095114..1096166,1096295..1097794)) 1 NC_012966.1 Meiosis-specific protein of unknown function, required for spore wall formation during sporulation 1097794 8200828 PAS_chr4_0560 Pichia pastoris GS115 Meiosis-specific protein of unknown function, required for spore wall formation during sporulation XP_002493999.1 1095114 R 644223 CDS PAS_chr4_0561 254573782 8200829 complement(1098019..1098360) 1 NC_012966.1 Mitochondrial intermembrane space protein, forms a complex with TIm8p 1098360 8200829 PAS_chr4_0561 Pichia pastoris GS115 Mitochondrial intermembrane space protein, forms a complex with TIm8p XP_002494000.1 1098019 R 644223 CDS PAS_chr4_0562 254573784 8200830 1098940..1100055 1 NC_012966.1 Similar to globins and has a functional heme-binding domain 1100055 8200830 PAS_chr4_0562 Pichia pastoris GS115 Similar to globins and has a functional heme-binding domain XP_002494001.1 1098940 D 644223 CDS PAS_chr4_0977 254573786 8200831 1100376..1102736 1 NC_012966.1 hypothetical protein 1102736 8200831 PAS_chr4_0977 Pichia pastoris GS115 hypothetical protein XP_002494002.1 1100376 D 644223 CDS PAS_chr4_0563 254573788 8201010 1103152..1104057 1 NC_012966.1 Subunit of the exosome, which is an essential complex present in both nucleus and cytoplasm 1104057 8201010 PAS_chr4_0563 Pichia pastoris GS115 Subunit of the exosome, which is an essential complex present in both nucleus and cytoplasm XP_002494003.1 1103152 D 644223 CDS PAS_chr4_0564 254573790 8200832 complement(1104146..1105171) 1 NC_012966.1 Phosphatidylinositol transfer protein (PITP) 1105171 8200832 PAS_chr4_0564 Pichia pastoris GS115 Phosphatidylinositol transfer protein (PITP) XP_002494004.1 1104146 R 644223 CDS PAS_chr4_0565 254573792 8200833 1105696..1106493 1 NC_012966.1 hypothetical protein 1106493 8200833 PAS_chr4_0565 Pichia pastoris GS115 hypothetical protein XP_002494005.1 1105696 D 644223 CDS PAS_chr4_0566 254573794 8200834 complement(1106518..1107423) 1 NC_012966.1 Subunit of both RNase MRP and nuclear RNase P 1107423 8200834 PAS_chr4_0566 Pichia pastoris GS115 Subunit of both RNase MRP and nuclear RNase P XP_002494006.1 1106518 R 644223 CDS PAS_chr4_0567 254573796 8200835 1107821..1108648 1 NC_012966.1 Putative protein of unknown function, contains DHHC domain 1108648 8200835 PAS_chr4_0567 Pichia pastoris GS115 Putative protein of unknown function, contains DHHC domain XP_002494007.1 1107821 D 644223 CDS PAS_chr4_0568 254573798 8200836 complement(1108704..1110236) 1 NC_012966.1 Palmitoylated, plasma membrane-bound casein kinase I isoform 1110236 8200836 PAS_chr4_0568 Pichia pastoris GS115 Palmitoylated, plasma membrane-bound casein kinase I isoform XP_002494008.1 1108704 R 644223 CDS PAS_chr4_0570 254573800 8200837 1111329..1112306 1 NC_012966.1 Endoplasmic reticulum (ER) resident protein 1112306 8200837 PAS_chr4_0570 Pichia pastoris GS115 Endoplasmic reticulum (ER) resident protein XP_002494009.1 1111329 D 644223 CDS PAS_chr4_0571 254573802 8200838 complement(1113020..1114609) 1 NC_012966.1 Glycerol proton symporter of the plasma membrane, subject to glucose-induced inactivation 1114609 8200838 PAS_chr4_0571 Pichia pastoris GS115 Glycerol proton symporter of the plasma membrane, subject to glucose-induced inactivation XP_002494010.1 1113020 R 644223 CDS PAS_chr4_0978 254573804 8200839 complement(join(1115362..1116297,1116519..1116596)) 1 NC_012966.1 hypothetical protein 1116596 8200839 PAS_chr4_0978 Pichia pastoris GS115 hypothetical protein XP_002494011.1 1115362 R 644223 CDS PAS_chr4_0572 254573806 8201011 1116938..1118314 1 NC_012966.1 hypothetical protein 1118314 8201011 PAS_chr4_0572 Pichia pastoris GS115 hypothetical protein XP_002494012.1 1116938 D 644223 CDS PAS_chr4_0575 254573808 8200840 1122208..1124229 1 NC_012966.1 hypothetical protein 1124229 8200840 PAS_chr4_0575 Pichia pastoris GS115 hypothetical protein XP_002494013.1 1122208 D 644223 CDS PAS_chr4_0576 254573810 8200841 complement(1127225..1128301) 1 NC_012966.1 NADPH-dependent medium chain alcohol dehydrogenase with broad substrate specificity 1128301 8200841 PAS_chr4_0576 Pichia pastoris GS115 NADPH-dependent medium chain alcohol dehydrogenase with broad substrate specificity XP_002494014.1 1127225 R 644223 CDS PAS_chr4_0577 254573812 8200842 1128624..1129559 1 NC_012966.1 hypothetical protein 1129559 8200842 PAS_chr4_0577 Pichia pastoris GS115 hypothetical protein XP_002494015.1 1128624 D 644223 CDS PAS_chr4_0578 254573814 8200843 complement(1129982..1130887) 1 NC_012966.1 Carbonic anhydrase 1130887 8200843 PAS_chr4_0578 Pichia pastoris GS115 Carbonic anhydrase XP_002494016.1 1129982 R 644223 CDS PAS_chr4_0579 254573816 8200844 1131823..1133535 1 NC_012966.1 Intracellular sporulation-specific glucoamylase involved in glycogen degradation 1133535 8200844 PAS_chr4_0579 Pichia pastoris GS115 Intracellular sporulation-specific glucoamylase involved in glycogen degradation XP_002494017.1 1131823 D 644223 CDS PAS_chr4_0580 254573818 8200845 join(1133964..1133987,1134044..1135117) 1 NC_012966.1 Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase 1135117 8200845 PAS_chr4_0580 Pichia pastoris GS115 Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase XP_002494018.1 1133964 D 644223 CDS PAS_chr4_0581 254573820 8200846 1135323..1136915 1 NC_012966.1 Protein of unknown function, required for survival upon exposure to K1 killer toxin 1136915 8200846 PAS_chr4_0581 Pichia pastoris GS115 Protein of unknown function, required for survival upon exposure to K1 killer toxin XP_002494019.1 1135323 D 644223 CDS PAS_chr4_0582 254573822 8200847 complement(1136908..1137912) 1 NC_012966.1 Putative protein of unknown function 1137912 8200847 PAS_chr4_0582 Pichia pastoris GS115 Putative protein of unknown function XP_002494020.1 1136908 R 644223 CDS PAS_chr4_0583 254573824 8200848 1138197..1140719 1 NC_012966.1 hypothetical protein 1140719 8200848 PAS_chr4_0583 Pichia pastoris GS115 hypothetical protein XP_002494021.1 1138197 D 644223 CDS PAS_chr4_0584 254573826 8200849 1140993..1142792 1 NC_012966.1 Aspartic protease, attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor 1142792 8200849 PAS_chr4_0584 Pichia pastoris GS115 Aspartic protease, attached to the plasma membrane via a glycosylphosphatidylinositol (GPI) anchor XP_002494022.1 1140993 D 644223 CDS PAS_chr4_0979 254573828 8200850 1143135..1144904 1 NC_012966.1 hypothetical protein 1144904 8200850 PAS_chr4_0979 Pichia pastoris GS115 hypothetical protein XP_002494023.1 1143135 D 644223 CDS PAS_chr4_0585 254573830 8201012 complement(1144939..1146582) 1 NC_012966.1 Serine/threonine kinase and DNA damage checkpoint effector 1146582 8201012 PAS_chr4_0585 Pichia pastoris GS115 Serine/threonine kinase and DNA damage checkpoint effector XP_002494024.1 1144939 R 644223 CDS PAS_chr4_0586 254573832 8200851 1146736..1148211 1 NC_012966.1 hypothetical protein 1148211 8200851 PAS_chr4_0586 Pichia pastoris GS115 hypothetical protein XP_002494025.1 1146736 D 644223 CDS PAS_chr4_0587 254573834 8200852 1148331..1149824 1 NC_012966.1 Mitochondrial serine hydroxymethyltransferase 1149824 8200852 PAS_chr4_0587 Pichia pastoris GS115 Mitochondrial serine hydroxymethyltransferase XP_002494026.1 1148331 D 644223 CDS PAS_chr4_0588 254573836 8200853 complement(1150511..1151299) 1 NC_012966.1 hypothetical protein 1151299 8200853 PAS_chr4_0588 Pichia pastoris GS115 hypothetical protein XP_002494027.1 1150511 R 644223 CDS PAS_chr4_0589 254573838 8200854 complement(1152262..1152600) 1 NC_012966.1 hypothetical protein 1152600 8200854 PAS_chr4_0589 Pichia pastoris GS115 hypothetical protein XP_002494028.1 1152262 R 644223 CDS PAS_chr4_0590 254573840 8200855 complement(1153791..1156133) 1 NC_012966.1 hypothetical protein 1156133 8200855 PAS_chr4_0590 Pichia pastoris GS115 hypothetical protein XP_002494029.1 1153791 R 644223 CDS PAS_chr4_0591 254573842 8200856 1156653..1156802 1 NC_012966.1 hypothetical protein 1156802 8200856 PAS_chr4_0591 Pichia pastoris GS115 hypothetical protein XP_002494030.1 1156653 D 644223 CDS PAS_chr4_0592 254573844 8200857 complement(1157065..1158054) 1 NC_012966.1 Mitochondrial iron transporter of the mitochondrial carrier family (MCF) 1158054 8200857 PAS_chr4_0592 Pichia pastoris GS115 Mitochondrial iron transporter of the mitochondrial carrier family (MCF) XP_002494031.1 1157065 R 644223 CDS PAS_chr4_0593 254573846 8200858 complement(1158498..1159538) 1 NC_012966.1 Glyoxylate reductase 1159538 8200858 PAS_chr4_0593 Pichia pastoris GS115 Glyoxylate reductase XP_002494032.1 1158498 R 644223 CDS PAS_chr4_0594 254573848 8200859 1159895..1160896 1 NC_012966.1 Putative protein of unknown function 1160896 8200859 PAS_chr4_0594 Pichia pastoris GS115 Putative protein of unknown function XP_002494033.1 1159895 D 644223 CDS PAS_chr4_0595 254573850 8200860 complement(1160893..1163136) 1 NC_012966.1 Putative protein of unknown function 1163136 8200860 PAS_chr4_0595 Pichia pastoris GS115 Putative protein of unknown function XP_002494034.1 1160893 R 644223 CDS PAS_chr4_0596 254573852 8200861 1163386..1164675 1 NC_012966.1 Putative protein of unknown function 1164675 8200861 PAS_chr4_0596 Pichia pastoris GS115 Putative protein of unknown function XP_002494035.1 1163386 D 644223 CDS PAS_chr4_0597 254573854 8200862 complement(1164815..1165852) 1 NC_012966.1 hypothetical protein 1165852 8200862 PAS_chr4_0597 Pichia pastoris GS115 hypothetical protein XP_002494036.1 1164815 R 644223 CDS PAS_chr4_0598 254573856 8200863 complement(1166657..1168372) 1 NC_012966.1 Dihydrosphingosine phosphate lyase 1168372 8200863 PAS_chr4_0598 Pichia pastoris GS115 Dihydrosphingosine phosphate lyase XP_002494037.1 1166657 R 644223 CDS PAS_chr4_0599 254573858 8200864 complement(1168525..1170540) 1 NC_012966.1 Subunit of a possibly tetrameric trichostatin A-sensitive class II histone deacetylase complex 1170540 8200864 PAS_chr4_0599 Pichia pastoris GS115 Subunit of a possibly tetrameric trichostatin A-sensitive class II histone deacetylase complex XP_002494038.1 1168525 R 644223 CDS PAS_chr4_0600 254573860 8200865 complement(1170680..1173028) 1 NC_012966.1 GTPase-activating protein 1173028 8200865 PAS_chr4_0600 Pichia pastoris GS115 GTPase-activating protein XP_002494039.1 1170680 R 644223 CDS PAS_chr4_0601 254573862 8200866 1173988..1175373 1 NC_012966.1 Basic leucine zipper (bZIP) transcription factor required for oxidative stress tolerance 1175373 8200866 PAS_chr4_0601 Pichia pastoris GS115 Basic leucine zipper (bZIP) transcription factor required for oxidative stress tolerance XP_002494040.1 1173988 D 644223 CDS PAS_chr4_0602 254573864 8200867 complement(1175436..1176665) 1 NC_012966.1 hypothetical protein 1176665 8200867 PAS_chr4_0602 Pichia pastoris GS115 hypothetical protein XP_002494041.1 1175436 R 644223 CDS PAS_chr4_0603 254573866 8200868 complement(1177081..1177854) 1 NC_012966.1 Acidic protein of the mitochondrial matrix involved in oxidative phosphorylation 1177854 8200868 PAS_chr4_0603 Pichia pastoris GS115 Acidic protein of the mitochondrial matrix involved in oxidative phosphorylation XP_002494042.1 1177081 R 644223 CDS PAS_chr4_0604 254573868 8200869 complement(1178387..1179760) 1 NC_012966.1 B-type cyclin involved in cell cycle progression 1179760 8200869 PAS_chr4_0604 Pichia pastoris GS115 B-type cyclin involved in cell cycle progression XP_002494043.1 1178387 R 644223 CDS PAS_chr4_0605 254573870 8200870 1181387..1182058 1 NC_012966.1 Putative protein of unknown function 1182058 8200870 PAS_chr4_0605 Pichia pastoris GS115 Putative protein of unknown function XP_002494044.1 1181387 D 644223 CDS PAS_chr4_0606 254573872 8200871 1182268..1185384 1 NC_012966.1 Guanine nucleotide exchange factor (GEF) 1185384 8200871 PAS_chr4_0606 Pichia pastoris GS115 Guanine nucleotide exchange factor (GEF) XP_002494045.1 1182268 D 644223 CDS PAS_chr4_0607 254573874 8200872 join(1185547..1185564,1185620..1185750,1185837..1185942) 1 NC_012966.1 Putative protein of unknown function, conserved in fungi 1185942 8200872 PAS_chr4_0607 Pichia pastoris GS115 Putative protein of unknown function, conserved in fungi XP_002494046.1 1185547 D 644223 CDS PAS_chr4_0608 254573876 8200873 1186200..1188386 1 NC_012966.1 Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p) 1188386 8200873 PAS_chr4_0608 Pichia pastoris GS115 Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad7p) XP_002494047.1 1186200 D 644223 CDS PAS_chr4_0609 254573878 8200874 complement(1188380..1190641) 1 NC_012966.1 Protein that forms a complex with Pbp1p 1190641 8200874 PAS_chr4_0609 Pichia pastoris GS115 Protein that forms a complex with Pbp1p XP_002494048.1 1188380 R 644223 CDS PAS_chr4_0610 254573880 8200875 1190864..1191847 1 NC_012966.1 Gamma subunit of the oligosaccharyltransferase complex of the ER lumen, which catalyzes asparagine-l 1191847 8200875 PAS_chr4_0610 Pichia pastoris GS115 Gamma subunit of the oligosaccharyltransferase complex of the ER lumen, which catalyzes asparagine-l XP_002494049.1 1190864 D 644223 CDS PAS_chr4_0611 254573882 8200876 complement(1191891..1192307) 1 NC_012966.1 hypothetical protein 1192307 8200876 PAS_chr4_0611 Pichia pastoris GS115 hypothetical protein XP_002494050.1 1191891 R 644223 CDS PAS_chr4_0612 254573884 8201287 1192485..1193543 1 NC_012966.1 Peripherally bound inner membrane protein of the mitochondrial matrix 1193543 8201287 PAS_chr4_0612 Pichia pastoris GS115 Peripherally bound inner membrane protein of the mitochondrial matrix XP_002494051.1 1192485 D 644223 CDS PAS_chr4_0613 254573886 8201288 1194049..1195335 1 NC_012966.1 Adenylosuccinate synthase 1195335 8201288 PAS_chr4_0613 Pichia pastoris GS115 Adenylosuccinate synthase XP_002494052.1 1194049 D 644223 CDS PAS_chr4_0614 254573888 8201323 complement(1195366..1197336) 1 NC_012966.1 hypothetical protein 1197336 8201323 PAS_chr4_0614 Pichia pastoris GS115 hypothetical protein XP_002494053.1 1195366 R 644223 CDS PAS_chr4_0615 254573890 8201324 1197534..1198247 1 NC_012966.1 Putative S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family 1198247 8201324 PAS_chr4_0615 Pichia pastoris GS115 Putative S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family XP_002494054.1 1197534 D 644223 CDS PAS_chr4_0616 254573892 8201325 complement(1198264..1199352) 1 NC_012966.1 hypothetical protein 1199352 8201325 PAS_chr4_0616 Pichia pastoris GS115 hypothetical protein XP_002494055.1 1198264 R 644223 CDS PAS_chr4_0617 254573894 8201326 1199882..1202200 1 NC_012966.1 hypothetical protein 1202200 8201326 PAS_chr4_0617 Pichia pastoris GS115 hypothetical protein XP_002494056.1 1199882 D 644223 CDS PAS_chr4_0618 254573896 8201327 complement(1202277..1206026) 1 NC_012966.1 One of two type I myosins 1206026 8201327 PAS_chr4_0618 Pichia pastoris GS115 One of two type I myosins XP_002494057.1 1202277 R 644223 CDS PAS_chr4_0619 254573898 8201328 1206270..1207466 1 NC_012966.1 Putative high affinity iron transporter involved in transport of intravacuolar stores of iron 1207466 8201328 PAS_chr4_0619 Pichia pastoris GS115 Putative high affinity iron transporter involved in transport of intravacuolar stores of iron XP_002494058.1 1206270 D 644223 CDS PAS_chr4_0620 254573900 8201329 1207994..1208701 1 NC_012966.1 hypothetical protein 1208701 8201329 PAS_chr4_0620 Pichia pastoris GS115 hypothetical protein XP_002494059.1 1207994 D 644223 CDS PAS_chr4_0621 254573902 8201330 1209018..1211378 1 NC_012966.1 hypothetical protein 1211378 8201330 PAS_chr4_0621 Pichia pastoris GS115 hypothetical protein XP_002494060.1 1209018 D 644223 CDS PAS_chr4_0622 254573904 8201331 complement(1212301..1213104) 1 NC_012966.1 hypothetical protein 1213104 8201331 PAS_chr4_0622 Pichia pastoris GS115 hypothetical protein XP_002494061.1 1212301 R 644223 CDS PAS_chr4_0623 254573906 8201332 complement(1213269..1214609) 1 NC_012966.1 Alpha-tubulin 1214609 8201332 PAS_chr4_0623 Pichia pastoris GS115 Alpha-tubulin XP_002494062.1 1213269 R 644223 CDS PAS_chr4_0624 254573908 8201333 complement(1214762..1216201) 1 NC_012966.1 Non-essential protein of unknown function required for transcriptional induction 1216201 8201333 PAS_chr4_0624 Pichia pastoris GS115 Non-essential protein of unknown function required for transcriptional induction XP_002494063.1 1214762 R 644223 CDS PAS_chr4_0625 254573910 8201334 join(1216825..1216849,1216903..1218449) 1 NC_012966.1 hypothetical protein 1218449 8201334 PAS_chr4_0625 Pichia pastoris GS115 hypothetical protein XP_002494064.1 1216825 D 644223 CDS PAS_chr4_0626 254573912 8201335 complement(1218492..1220339) 1 NC_012966.1 Transcriptional activator of genes involved in nitrogen catabolite repression 1220339 8201335 PAS_chr4_0626 Pichia pastoris GS115 Transcriptional activator of genes involved in nitrogen catabolite repression XP_002494065.1 1218492 R 644223 CDS PAS_chr4_0627 254573914 8201336 complement(1220958..1221311) 1 NC_012966.1 Plasma membrane localized protein that protects membranes from desiccation 1221311 8201336 PAS_chr4_0627 Pichia pastoris GS115 Plasma membrane localized protein that protects membranes from desiccation XP_002494066.1 1220958 R 644223 CDS PAS_chr4_0628 254573916 8201337 1221977..1222939 1 NC_012966.1 hypothetical protein 1222939 8201337 PAS_chr4_0628 Pichia pastoris GS115 hypothetical protein XP_002494067.1 1221977 D 644223 CDS PAS_chr4_0629 254573918 8201338 complement(1223010..1225316) 1 NC_012966.1 GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p 1225316 8201338 PAS_chr4_0629 Pichia pastoris GS115 GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p XP_002494068.1 1223010 R 644223 CDS PAS_chr4_0630 254573920 8201339 1225508..1225894 1 NC_012966.1 hypothetical protein 1225894 8201339 PAS_chr4_0630 Pichia pastoris GS115 hypothetical protein XP_002494069.1 1225508 D 644223 CDS PAS_chr4_0631 254573922 8201340 complement(1226812..1227999) 1 NC_012966.1 hypothetical protein 1227999 8201340 PAS_chr4_0631 Pichia pastoris GS115 hypothetical protein XP_002494070.1 1226812 R 644223 CDS PAS_chr4_0632 254573924 8201341 1228516..1229781 1 NC_012966.1 hypothetical protein 1229781 8201341 PAS_chr4_0632 Pichia pastoris GS115 hypothetical protein XP_002494071.1 1228516 D 644223 CDS PAS_chr4_0633 254573926 8201342 1230147..1232771 1 NC_012966.1 hypothetical protein 1232771 8201342 PAS_chr4_0633 Pichia pastoris GS115 hypothetical protein XP_002494072.1 1230147 D 644223 CDS PAS_chr4_0634 254573928 8201343 complement(1232792..1234990) 1 NC_012966.1 Transcription cofactor, forms complexes with DNA-binding proteins Swi4p and Mbp1p 1234990 8201343 PAS_chr4_0634 Pichia pastoris GS115 Transcription cofactor, forms complexes with DNA-binding proteins Swi4p and Mbp1p XP_002494073.1 1232792 R 644223 CDS PAS_chr4_0635 254573930 8201344 1235313..1236398 1 NC_012966.1 hypothetical protein 1236398 8201344 PAS_chr4_0635 Pichia pastoris GS115 hypothetical protein XP_002494074.1 1235313 D 644223 CDS PAS_chr4_0636 254573932 8201345 complement(1236424..1241826) 1 NC_012966.1 Formin, nucleates the formation of linear actin filaments 1241826 8201345 PAS_chr4_0636 Pichia pastoris GS115 Formin, nucleates the formation of linear actin filaments XP_002494075.1 1236424 R 644223 CDS PAS_chr4_0637 254573934 8201346 1242494..1243810 1 NC_012966.1 hypothetical protein 1243810 8201346 PAS_chr4_0637 Pichia pastoris GS115 hypothetical protein XP_002494076.1 1242494 D 644223 CDS PAS_chr4_0638 254573936 8201347 complement(1243881..1244558) 1 NC_012966.1 Subunit of the heme-activated, glucose-repressed Hap2p/3p/4p/5p CCAAT-binding complex 1244558 8201347 PAS_chr4_0638 Pichia pastoris GS115 Subunit of the heme-activated, glucose-repressed Hap2p/3p/4p/5p CCAAT-binding complex XP_002494077.1 1243881 R 644223 CDS PAS_chr4_0640 254573938 8201348 1245183..1247498 1 NC_012966.1 hypothetical protein 1247498 8201348 PAS_chr4_0640 Pichia pastoris GS115 hypothetical protein XP_002494078.1 1245183 D 644223 CDS PAS_chr4_0641 254573940 8201349 complement(join(1247526..1248805,1248883..1249210)) 1 NC_012966.1 Essential protein required for sister chromatid cohesion in mitosis and meiosis 1249210 8201349 PAS_chr4_0641 Pichia pastoris GS115 Essential protein required for sister chromatid cohesion in mitosis and meiosis XP_002494079.1 1247526 R 644223 CDS PAS_chr4_0642 254573942 8201350 complement(1249736..1250707) 1 NC_012966.1 Putative protein of unknown function 1250707 8201350 PAS_chr4_0642 Pichia pastoris GS115 Putative protein of unknown function XP_002494080.1 1249736 R 644223 CDS PAS_chr4_0643 254573944 8201351 1251330..1253174 1 NC_012966.1 hypothetical protein 1253174 8201351 PAS_chr4_0643 Pichia pastoris GS115 hypothetical protein XP_002494081.1 1251330 D 644223 CDS PAS_chr4_0644 254573946 8201352 complement(1253226..1253705) 1 NC_012966.1 Mitochondrial ribosomal protein of the large subunit 1253705 8201352 PAS_chr4_0644 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002494082.1 1253226 R 644223 CDS PAS_chr4_0645 254573948 8201353 join(1253929..1254346,1254375..1255252) 1 NC_012966.1 Acetylornithine aminotransferase 1255252 8201353 PAS_chr4_0645 Pichia pastoris GS115 Acetylornithine aminotransferase XP_002494083.1 1253929 D 644223 CDS PAS_chr4_0647 254573950 8201354 complement(1255297..1258542) 1 NC_012966.1 Low affinity vacuolar membrane localized monovalent cation/H+ antiporter 1258542 8201354 PAS_chr4_0647 Pichia pastoris GS115 Low affinity vacuolar membrane localized monovalent cation/H+ antiporter XP_002494084.1 1255297 R 644223 CDS PAS_chr4_0648 254573952 8201355 complement(1258776..1259669) 1 NC_012966.1 Spermine synthase, required for the biosynthesis of spermine 1259669 8201355 PAS_chr4_0648 Pichia pastoris GS115 Spermine synthase, required for the biosynthesis of spermine XP_002494085.1 1258776 R 644223 CDS PAS_chr4_0649 254573954 8201356 1259848..1261377 1 NC_012966.1 UBX (ubiquitin regulatory X) domain-containing protein that interacts with Cdc48p 1261377 8201356 PAS_chr4_0649 Pichia pastoris GS115 UBX (ubiquitin regulatory X) domain-containing protein that interacts with Cdc48p XP_002494086.1 1259848 D 644223 CDS PAS_chr4_0650 254573956 8201357 complement(join(1261398..1261796,1261848..1261904)) 1 NC_012966.1 hypothetical protein 1261904 8201357 PAS_chr4_0650 Pichia pastoris GS115 hypothetical protein XP_002494087.1 1261398 R 644223 CDS PAS_chr4_0651 254573958 8201358 complement(1262505..1263491) 1 NC_012966.1 hypothetical protein 1263491 8201358 PAS_chr4_0651 Pichia pastoris GS115 hypothetical protein XP_002494088.1 1262505 R 644223 CDS PAS_chr4_0652 254573960 8201359 complement(1263737..1264510) 1 NC_012966.1 ER membrane protein involved in a late step of glycosylphosphatidylinositol (GPI) anchor assembly 1264510 8201359 PAS_chr4_0652 Pichia pastoris GS115 ER membrane protein involved in a late step of glycosylphosphatidylinositol (GPI) anchor assembly XP_002494089.1 1263737 R 644223 CDS PAS_chr4_0653 254573962 8201360 complement(1264670..1265989) 1 NC_012966.1 Protein integral to the mitochondrial membrane 1265989 8201360 PAS_chr4_0653 Pichia pastoris GS115 Protein integral to the mitochondrial membrane XP_002494090.1 1264670 R 644223 CDS PAS_chr4_0654 254573964 8201361 join(1266285..1269726,1269758..1270047) 1 NC_012966.1 Karyopherin involved in nuclear import and export 1270047 8201361 PAS_chr4_0654 Pichia pastoris GS115 Karyopherin involved in nuclear import and export XP_002494091.1 1266285 D 644223 CDS PAS_chr4_0655 254573966 8201362 complement(1270085..1271101) 1 NC_012966.1 hypothetical protein 1271101 8201362 PAS_chr4_0655 Pichia pastoris GS115 hypothetical protein XP_002494092.1 1270085 R 644223 CDS PAS_chr4_0656 254573968 8201363 1271535..1273532 1 NC_012966.1 Putative protein of unknown function 1273532 8201363 PAS_chr4_0656 Pichia pastoris GS115 Putative protein of unknown function XP_002494093.1 1271535 D 644223 CDS PAS_chr4_0657 254573970 8201364 1273687..1274877 1 NC_012966.1 Nuclear pore complex subunit, part of a subcomplex also containing Nup53p, Nup170p, and Pse1p 1274877 8201364 PAS_chr4_0657 Pichia pastoris GS115 Nuclear pore complex subunit, part of a subcomplex also containing Nup53p, Nup170p, and Pse1p XP_002494094.1 1273687 D 644223 CDS PAS_chr4_0658 254573972 8201365 complement(1274864..1275859) 1 NC_012966.1 hypothetical protein 1275859 8201365 PAS_chr4_0658 Pichia pastoris GS115 hypothetical protein XP_002494095.1 1274864 R 644223 CDS PAS_chr4_0659 254573974 8201366 join(1276014..1276024,1276087..1276891) 1 NC_012966.1 Subunit of the RNA polymerase II mediator complex 1276891 8201366 PAS_chr4_0659 Pichia pastoris GS115 Subunit of the RNA polymerase II mediator complex XP_002494096.1 1276014 D 644223 CDS PAS_chr4_0660 254573976 8201367 complement(1276882..1278012) 1 NC_012966.1 hypothetical protein 1278012 8201367 PAS_chr4_0660 Pichia pastoris GS115 hypothetical protein XP_002494097.1 1276882 R 644223 CDS PAS_chr4_0661 254573978 8201368 complement(1278203..1279102) 1 NC_012966.1 Essential nuclear protein, constituent of 66S pre-ribosomal particles 1279102 8201368 PAS_chr4_0661 Pichia pastoris GS115 Essential nuclear protein, constituent of 66S pre-ribosomal particles XP_002494098.1 1278203 R 644223 CDS PAS_chr4_0662 254573980 8201369 1279589..1283386 1 NC_012966.1 Aminophospholipid translocase (flippase) that maintains membrane lipid asymmetry in post-Golgi secre 1283386 8201369 PAS_chr4_0662 Pichia pastoris GS115 Aminophospholipid translocase (flippase) that maintains membrane lipid asymmetry in post-Golgi secre XP_002494099.1 1279589 D 644223 CDS PAS_chr4_0663 254573982 8201370 complement(1283409..1284698) 1 NC_012966.1 hypothetical protein 1284698 8201370 PAS_chr4_0663 Pichia pastoris GS115 hypothetical protein XP_002494100.1 1283409 R 644223 CDS PAS_chr4_0664 254573984 8201371 1284846..1285811 1 NC_012966.1 S-adenosylmethionine-homocysteine methyltransferase 1285811 8201371 PAS_chr4_0664 Pichia pastoris GS115 S-adenosylmethionine-homocysteine methyltransferase XP_002494101.1 1284846 D 644223 CDS PAS_chr4_0665 254573986 8201372 1285950..1287296 1 NC_012966.1 Gamma-glutamyl phosphate reductase, catalyzes the second step in proline biosynthesis 1287296 8201372 PAS_chr4_0665 Pichia pastoris GS115 Gamma-glutamyl phosphate reductase, catalyzes the second step in proline biosynthesis XP_002494102.1 1285950 D 644223 CDS PAS_chr4_0666 254573988 8201373 1287901..1289076 1 NC_012966.1 Predicted protein kinase, overexpression causes sensitivity to staurosporine 1289076 8201373 PAS_chr4_0666 Pichia pastoris GS115 Predicted protein kinase, overexpression causes sensitivity to staurosporine XP_002494103.1 1287901 D 644223 CDS PAS_chr4_0667 254573990 8201374 1289230..1291824 1 NC_012966.1 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA 1291824 8201374 PAS_chr4_0667 Pichia pastoris GS115 Nucleolar protein, component of the small subunit (SSU) processome containing the U3 snoRNA XP_002494104.1 1289230 D 644223 CDS PAS_chr4_0980 254573992 8201375 1292180..1295089 1 NC_012966.1 hypothetical protein 1295089 8201375 PAS_chr4_0980 Pichia pastoris GS115 hypothetical protein XP_002494105.1 1292180 D 644223 CDS PAS_chr4_0668 254573994 8201013 complement(1295128..1295973) 1 NC_012966.1 Beta 5 subunit of the 20S proteasome, responsible for the chymotryptic activity of the proteasome 1295973 8201013 PAS_chr4_0668 Pichia pastoris GS115 Beta 5 subunit of the 20S proteasome, responsible for the chymotryptic activity of the proteasome XP_002494106.1 1295128 R 644223 CDS PAS_chr4_0669 254573996 8201376 join(1296379..1296381,1296470..1296991) 1 NC_012966.1 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl11Bp 1296991 8201376 PAS_chr4_0669 Pichia pastoris GS115 Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl11Bp XP_002494107.1 1296379 D 644223 CDS PAS_chr4_0670 254573998 8201377 complement(1297069..1297641) 1 NC_012966.1 hypothetical protein 1297641 8201377 PAS_chr4_0670 Pichia pastoris GS115 hypothetical protein XP_002494108.1 1297069 R 644223 CDS PAS_chr4_0671 254574000 8201378 1298235..1299179 1 NC_012966.1 Putative transporter, member of the mitochondrial carrier family 1299179 8201378 PAS_chr4_0671 Pichia pastoris GS115 Putative transporter, member of the mitochondrial carrier family XP_002494109.1 1298235 D 644223 CDS PAS_chr4_0672 254574002 8201379 join(1299338..1299370,1299452..1299640) 1 NC_012966.1 hypothetical protein 1299640 8201379 PAS_chr4_0672 Pichia pastoris GS115 hypothetical protein XP_002494110.1 1299338 D 644223 CDS PAS_chr4_0673 254574004 8201380 complement(1299687..1300481) 1 NC_012966.1 Putative protein of unknown function 1300481 8201380 PAS_chr4_0673 Pichia pastoris GS115 Putative protein of unknown function XP_002494111.1 1299687 R 644223 CDS PAS_chr4_0674 254574006 8201381 1300664..1301032 1 NC_012966.1 Subunit F of the eight-subunit V1 peripheral membrane domain of vacuolar H+-ATPase (V-ATPase) 1301032 8201381 PAS_chr4_0674 Pichia pastoris GS115 Subunit F of the eight-subunit V1 peripheral membrane domain of vacuolar H+-ATPase (V-ATPase) XP_002494112.1 1300664 D 644223 CDS PAS_chr4_0675 254574008 8201382 complement(1301098..1302900) 1 NC_012966.1 Component of the exomer complex, which also contains Csh6p, Bch1p, Bch2p, and Bud7p 1302900 8201382 PAS_chr4_0675 Pichia pastoris GS115 Component of the exomer complex, which also contains Csh6p, Bch1p, Bch2p, and Bud7p XP_002494113.1 1301098 R 644223 CDS PAS_chr4_0676 254574010 8201383 complement(1303123..1304589) 1 NC_012966.1 hypothetical protein 1304589 8201383 PAS_chr4_0676 Pichia pastoris GS115 hypothetical protein XP_002494114.1 1303123 R 644223 CDS PAS_chr4_0677 254574012 8201384 complement(1304779..1306194) 1 NC_012966.1 Gamma-aminobutyrate (GABA) transaminase (4-aminobutyrate aminotransferase) 1306194 8201384 PAS_chr4_0677 Pichia pastoris GS115 Gamma-aminobutyrate (GABA) transaminase (4-aminobutyrate aminotransferase) XP_002494115.1 1304779 R 644223 CDS PAS_chr4_0981 254574014 8201385 complement(1306633..1307511) 1 NC_012966.1 hypothetical protein 1307511 8201385 PAS_chr4_0981 Pichia pastoris GS115 hypothetical protein XP_002494116.1 1306633 R 644223 CDS PAS_chr4_0678 254574016 8201014 complement(1307800..1310757) 1 NC_012966.1 Putative protein of unknown function 1310757 8201014 PAS_chr4_0678 Pichia pastoris GS115 Putative protein of unknown function XP_002494117.1 1307800 R 644223 CDS PAS_chr4_0679 254574018 8201386 1310953..1312056 1 NC_012966.1 Probable component of the Rpd3 histone deacetylase complex 1312056 8201386 PAS_chr4_0679 Pichia pastoris GS115 Probable component of the Rpd3 histone deacetylase complex XP_002494118.1 1310953 D 644223 CDS PAS_chr4_0680 254574020 8201387 1312503..1313150 1 NC_012966.1 GTP-binding protein 1313150 8201387 PAS_chr4_0680 Pichia pastoris GS115 GTP-binding protein XP_002494119.1 1312503 D 644223 CDS PAS_chr4_0681 254574022 8201388 complement(1313207..1315117) 1 NC_012966.1 GTPase-activating protein (RhoGAP) for Rho3p and Rho4p 1315117 8201388 PAS_chr4_0681 Pichia pastoris GS115 GTPase-activating protein (RhoGAP) for Rho3p and Rho4p XP_002494120.1 1313207 R 644223 CDS PAS_chr4_0682 254574024 8201389 complement(1315316..1316230) 1 NC_012966.1 Protein kinase that stabilizes several plasma membrane amino acid transporters 1316230 8201389 PAS_chr4_0682 Pichia pastoris GS115 Protein kinase that stabilizes several plasma membrane amino acid transporters XP_002494121.1 1315316 R 644223 CDS PAS_chr4_0683 254574026 8201390 complement(1316835..1317176) 1 NC_012966.1 hypothetical protein 1317176 8201390 PAS_chr4_0683 Pichia pastoris GS115 hypothetical protein XP_002494122.1 1316835 R 644223 CDS PAS_chr4_0684 254574028 8201391 complement(1317412..1318392) 1 NC_012966.1 Arginase, responsible for arginine degradation 1318392 8201391 PAS_chr4_0684 Pichia pastoris GS115 Arginase, responsible for arginine degradation XP_002494123.1 1317412 R 644223 CDS PAS_chr4_0686 254574030 8201392 1319713..1321488 1 NC_012966.1 Vacuolar carboxypeptidase yscS 1321488 8201392 PAS_chr4_0686 Pichia pastoris GS115 Vacuolar carboxypeptidase yscS XP_002494124.1 1319713 D 644223 CDS PAS_chr4_0687 254574032 8200502 complement(1321895..1322644) 1 NC_012966.1 hypothetical protein 1322644 8200502 PAS_chr4_0687 Pichia pastoris GS115 hypothetical protein XP_002494125.1 1321895 R 644223 CDS PAS_chr4_0688 254574034 8200584 1324095..1325063 1 NC_012966.1 Mitochondrial succinate-fumarate transporter 1325063 8200584 PAS_chr4_0688 Pichia pastoris GS115 Mitochondrial succinate-fumarate transporter XP_002494126.1 1324095 D 644223 CDS PAS_chr4_0982 254574036 8200585 complement(1325300..1325623) 1 NC_012966.1 hypothetical protein 1325623 8200585 PAS_chr4_0982 Pichia pastoris GS115 hypothetical protein XP_002494127.1 1325300 R 644223 CDS PAS_chr4_0689 254574038 8201015 complement(1325750..1327600) 1 NC_012966.1 SET-domain lysine-N-methyltransferase 1327600 8201015 PAS_chr4_0689 Pichia pastoris GS115 SET-domain lysine-N-methyltransferase XP_002494128.1 1325750 R 644223 CDS PAS_chr4_0983 254574040 8200586 complement(1327840..1328499) 1 NC_012966.1 hypothetical protein 1328499 8200586 PAS_chr4_0983 Pichia pastoris GS115 hypothetical protein XP_002494129.1 1327840 R 644223 CDS PAS_chr4_0690 254574042 8201016 complement(1328679..1329548) 1 NC_012966.1 hypothetical protein 1329548 8201016 PAS_chr4_0690 Pichia pastoris GS115 hypothetical protein XP_002494130.1 1328679 R 644223 CDS PAS_chr4_0691 254574044 8200587 1329823..1331463 1 NC_012966.1 Putative lipoate-protein ligase A family member 1331463 8200587 PAS_chr4_0691 Pichia pastoris GS115 Putative lipoate-protein ligase A family member XP_002494131.1 1329823 D 644223 CDS PAS_chr4_0692 254574046 8200588 1331602..1332864 1 NC_012966.1 Sporulation-specific exo-1,3-beta-glucanase 1332864 8200588 PAS_chr4_0692 Pichia pastoris GS115 Sporulation-specific exo-1,3-beta-glucanase XP_002494132.1 1331602 D 644223 CDS PAS_chr4_0693 254574048 8200589 1332935..1333672 1 NC_012966.1 hypothetical protein 1333672 8200589 PAS_chr4_0693 Pichia pastoris GS115 hypothetical protein XP_002494133.1 1332935 D 644223 CDS PAS_chr4_0694 254574050 8200590 1334143..1337007 1 NC_012966.1 Cytoplasmic protein of unknown function that interacts with the cyclin Pcl7p 1337007 8200590 PAS_chr4_0694 Pichia pastoris GS115 Cytoplasmic protein of unknown function that interacts with the cyclin Pcl7p XP_002494134.1 1334143 D 644223 CDS PAS_chr4_0695 254574052 8200591 complement(1337012..1338877) 1 NC_012966.1 Essential 70kDa subunit of the exocyst complex 1338877 8200591 PAS_chr4_0695 Pichia pastoris GS115 Essential 70kDa subunit of the exocyst complex XP_002494135.1 1337012 R 644223 CDS PAS_chr4_0696 254574054 8200592 1339020..1339451 1 NC_012966.1 hypothetical protein 1339451 8200592 PAS_chr4_0696 Pichia pastoris GS115 hypothetical protein XP_002494136.1 1339020 D 644223 CDS PAS_chr4_0984 254574056 8200593 complement(1339471..1340193) 1 NC_012966.1 hypothetical protein 1340193 8200593 PAS_chr4_0984 Pichia pastoris GS115 hypothetical protein XP_002494137.1 1339471 R 644223 CDS PAS_chr4_0697 254574058 8201017 1340444..1341397 1 NC_012966.1 RNA polymerase III subunit C34 1341397 8201017 PAS_chr4_0697 Pichia pastoris GS115 RNA polymerase III subunit C34 XP_002494138.1 1340444 D 644223 CDS PAS_chr4_0698 254574060 8200594 complement(1341413..1342675) 1 NC_012966.1 hypothetical protein 1342675 8200594 PAS_chr4_0698 Pichia pastoris GS115 hypothetical protein XP_002494139.1 1341413 R 644223 CDS PAS_chr4_0699 254574062 8200595 1343554..1344270 1 NC_012966.1 hypothetical protein 1344270 8200595 PAS_chr4_0699 Pichia pastoris GS115 hypothetical protein XP_002494140.1 1343554 D 644223 CDS PAS_chr4_0700 254574064 8200596 1344600..1347188 1 NC_012966.1 Phospholipase C 1347188 8200596 PAS_chr4_0700 Pichia pastoris GS115 Phospholipase C XP_002494141.1 1344600 D 644223 CDS PAS_chr4_0701 254574066 8200597 complement(1347226..1348629) 1 NC_012966.1 Protein associated with U3 and U14 snoRNAs 1348629 8200597 PAS_chr4_0701 Pichia pastoris GS115 Protein associated with U3 and U14 snoRNAs XP_002494142.1 1347226 R 644223 CDS PAS_chr4_0702 254574068 8200598 1348883..1350331 1 NC_012966.1 Nucleotide exchange factor for Gsp1p, localizes to the nucleus 1350331 8200598 PAS_chr4_0702 Pichia pastoris GS115 Nucleotide exchange factor for Gsp1p, localizes to the nucleus XP_002494143.1 1348883 D 644223 CDS PAS_chr4_0703 254574070 8200599 complement(1350389..1352074) 1 NC_012966.1 Imidazole glycerol phosphate synthase (glutamine amidotransferase:cyclase) 1352074 8200599 PAS_chr4_0703 Pichia pastoris GS115 Imidazole glycerol phosphate synthase (glutamine amidotransferase:cyclase) XP_002494144.1 1350389 R 644223 CDS PAS_chr4_0704 254574072 8200600 1352418..1352795 1 NC_012966.1 Conserved protein that is a component of autophagosomes and Cvt vesicles 1352795 8200600 PAS_chr4_0704 Pichia pastoris GS115 Conserved protein that is a component of autophagosomes and Cvt vesicles XP_002494145.1 1352418 D 644223 CDS PAS_chr4_0705 254574074 8200601 complement(1352887..1354365) 1 NC_012966.1 Protein required for mitochondrial translation 1354365 8200601 PAS_chr4_0705 Pichia pastoris GS115 Protein required for mitochondrial translation XP_002494146.1 1352887 R 644223 CDS PAS_chr4_0706 254574076 8200602 1354675..1355742 1 NC_012966.1 hypothetical protein 1355742 8200602 PAS_chr4_0706 Pichia pastoris GS115 hypothetical protein XP_002494147.1 1354675 D 644223 CDS PAS_chr4_0708 254574078 8200603 complement(join(1355706..1356545,1356649..1357260)) 1 NC_012966.1 hypothetical protein 1357260 8200603 PAS_chr4_0708 Pichia pastoris GS115 hypothetical protein XP_002494148.1 1355706 R 644223 CDS PAS_chr4_0709 254574080 8200604 1357436..1360654 1 NC_012966.1 isoleucine-tRNA synthetase 1360654 8200604 PAS_chr4_0709 Pichia pastoris GS115 isoleucine-tRNA synthetase XP_002494149.1 1357436 D 644223 CDS PAS_chr4_0710 254574082 8200605 1360783..1361850 1 NC_012966.1 Component of the nuclear pore complex 1361850 8200605 PAS_chr4_0710 Pichia pastoris GS115 Component of the nuclear pore complex XP_002494150.1 1360783 D 644223 CDS PAS_chr4_0711 254574084 8200606 1362390..1364810 1 NC_012966.1 hypothetical protein 1364810 8200606 PAS_chr4_0711 Pichia pastoris GS115 hypothetical protein XP_002494151.1 1362390 D 644223 CDS PAS_chr4_0712 254574086 8200607 complement(1364891..1366288) 1 NC_012966.1 Dolichol-P-Man dependent alpha(1-3) mannosyltransferase 1366288 8200607 PAS_chr4_0712 Pichia pastoris GS115 Dolichol-P-Man dependent alpha(1-3) mannosyltransferase XP_002494152.1 1364891 R 644223 CDS PAS_chr4_0713 254574088 8200608 1366920..1367693 1 NC_012966.1 hypothetical protein 1367693 8200608 PAS_chr4_0713 Pichia pastoris GS115 hypothetical protein XP_002494153.1 1366920 D 644223 CDS PAS_chr4_0714 254574090 8200609 1367978..1368916 1 NC_012966.1 Mitochondrial serine protease 1368916 8200609 PAS_chr4_0714 Pichia pastoris GS115 Mitochondrial serine protease XP_002494154.1 1367978 D 644223 CDS PAS_chr4_0715 254574092 8200610 complement(1368983..1369441) 1 NC_012966.1 Putative protein of unknown function 1369441 8200610 PAS_chr4_0715 Pichia pastoris GS115 Putative protein of unknown function XP_002494155.1 1368983 R 644223 CDS PAS_chr4_0716 254574094 8200611 1369782..1371533 1 NC_012966.1 Nucleolar protein involved in rRNA processing and 60S ribosomal subunit biogenesis 1371533 8200611 PAS_chr4_0716 Pichia pastoris GS115 Nucleolar protein involved in rRNA processing and 60S ribosomal subunit biogenesis XP_002494156.1 1369782 D 644223 CDS PAS_chr4_0717 254574096 8200612 complement(join(1371610..1373790,1373864..1374115)) 1 NC_012966.1 Essential conserved protein that is part of the 90S preribosome 1374115 8200612 PAS_chr4_0717 Pichia pastoris GS115 Essential conserved protein that is part of the 90S preribosome XP_002494157.1 1371610 R 644223 CDS PAS_chr4_0718 254574098 8200613 1374516..1375337 1 NC_012966.1 hypothetical protein 1375337 8200613 PAS_chr4_0718 Pichia pastoris GS115 hypothetical protein XP_002494158.1 1374516 D 644223 CDS PAS_chr4_0719 254574100 8200614 complement(1375367..1376629) 1 NC_012966.1 GTPase activating protein (GAP) for Gsp1p, involved in nuclear transport 1376629 8200614 PAS_chr4_0719 Pichia pastoris GS115 GTPase activating protein (GAP) for Gsp1p, involved in nuclear transport XP_002494159.1 1375367 R 644223 CDS PAS_chr4_0720 254574102 8200615 complement(1376908..1377363) 1 NC_012966.1 Transcriptional coactivator 1377363 8200615 PAS_chr4_0720 Pichia pastoris GS115 Transcriptional coactivator XP_002494160.1 1376908 R 644223 CDS PAS_chr4_0721 254574104 8200616 1377945..1379639 1 NC_012966.1 hypothetical protein 1379639 8200616 PAS_chr4_0721 Pichia pastoris GS115 hypothetical protein XP_002494161.1 1377945 D 644223 CDS PAS_chr4_0722 254574106 8200617 complement(1379919..1380497) 1 NC_012966.1 hypothetical protein 1380497 8200617 PAS_chr4_0722 Pichia pastoris GS115 hypothetical protein XP_002494162.1 1379919 R 644223 CDS PAS_chr4_0723 254574108 8200618 1380547..1381656 1 NC_012966.1 hypothetical protein 1381656 8200618 PAS_chr4_0723 Pichia pastoris GS115 hypothetical protein XP_002494163.1 1380547 D 644223 CDS PAS_chr4_0724 254574110 8200619 1382284..1382862 1 NC_012966.1 hypothetical protein 1382862 8200619 PAS_chr4_0724 Pichia pastoris GS115 hypothetical protein XP_002494164.1 1382284 D 644223 CDS PAS_chr4_0725 254574112 8200620 complement(1383017..1383391) 1 NC_012966.1 Cytoplasmic thioredoxin isoenzyme of the thioredoxin system 1383391 8200620 PAS_chr4_0725 Pichia pastoris GS115 Cytoplasmic thioredoxin isoenzyme of the thioredoxin system XP_002494165.1 1383017 R 644223 CDS PAS_chr4_0726 254574114 8200621 complement(1383555..1384313) 1 NC_012966.1 Putative protein of unknown function 1384313 8200621 PAS_chr4_0726 Pichia pastoris GS115 Putative protein of unknown function XP_002494166.1 1383555 R 644223 CDS PAS_chr4_0985 254574116 8200622 complement(1384445..1386160) 1 NC_012966.1 hypothetical protein 1386160 8200622 PAS_chr4_0985 Pichia pastoris GS115 hypothetical protein XP_002494167.1 1384445 R 644223 CDS PAS_chr4_0727 254574118 8201018 1386761..1388077 1 NC_012966.1 Polypeptide release factor involved in translation termination 1388077 8201018 PAS_chr4_0727 Pichia pastoris GS115 Polypeptide release factor involved in translation termination XP_002494168.1 1386761 D 644223 CDS PAS_chr4_0728 254574120 8200623 complement(1388132..1390408) 1 NC_012966.1 Essential nucleolar protein, putative DEAD-box RNA helicase 1390408 8200623 PAS_chr4_0728 Pichia pastoris GS115 Essential nucleolar protein, putative DEAD-box RNA helicase XP_002494169.1 1388132 R 644223 CDS PAS_chr4_0729 254574122 8200624 1390524..1391495 1 NC_012966.1 Putative protein of unknown function 1391495 8200624 PAS_chr4_0729 Pichia pastoris GS115 Putative protein of unknown function XP_002494170.1 1390524 D 644223 CDS PAS_chr4_0730 254574124 8200625 join(1391987..1392407,1392592..1392875) 1 NC_012966.1 Inositol monophosphatase, involved in biosynthesis of inositol 1392875 8200625 PAS_chr4_0730 Pichia pastoris GS115 Inositol monophosphatase, involved in biosynthesis of inositol XP_002494171.1 1391987 D 644223 CDS PAS_chr4_0731 254574126 8200626 1393070..1394386 1 NC_012966.1 One of six ATPases of the 19S regulatory particle of the 26S proteasome 1394386 8200626 PAS_chr4_0731 Pichia pastoris GS115 One of six ATPases of the 19S regulatory particle of the 26S proteasome XP_002494172.1 1393070 D 644223 CDS PAS_chr4_0986 254574128 8200627 1394525..1395715 1 NC_012966.1 hypothetical protein 1395715 8200627 PAS_chr4_0986 Pichia pastoris GS115 hypothetical protein XP_002494173.1 1394525 D 644223 CDS PAS_chr4_0732 254574130 8201019 1396026..1399514 1 NC_012966.1 Cu(+2)-transporting P-type ATPase, required for export of copper from the cytosol into an extracytos 1399514 8201019 PAS_chr4_0732 Pichia pastoris GS115 Cu(+2)-transporting P-type ATPase, required for export of copper from the cytosol into an extracytos XP_002494174.1 1396026 D 644223 CDS PAS_chr4_0733 254574132 8200628 1400228..1402141 1 NC_012966.1 Flavoprotein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p) 1402141 8200628 PAS_chr4_0733 Pichia pastoris GS115 Flavoprotein subunit of succinate dehydrogenase (Sdh1p, Sdh2p, Sdh3p, Sdh4p) XP_002494175.1 1400228 D 644223 CDS PAS_chr4_0735 254574134 8200629 1404458..1405060 1 NC_012966.1 RNA polymerase III subunit C25, required for transcription initiation 1405060 8200629 PAS_chr4_0735 Pichia pastoris GS115 RNA polymerase III subunit C25, required for transcription initiation XP_002494176.1 1404458 D 644223 CDS PAS_chr4_0736 254574136 8200630 complement(1405115..1406440) 1 NC_012966.1 One of six ATPases of the 19S regulatory particle of the 26S proteasome 1406440 8200630 PAS_chr4_0736 Pichia pastoris GS115 One of six ATPases of the 19S regulatory particle of the 26S proteasome XP_002494177.1 1405115 R 644223 CDS PAS_chr4_0987 254574138 8200631 complement(1406638..1408005) 1 NC_012966.1 hypothetical protein 1408005 8200631 PAS_chr4_0987 Pichia pastoris GS115 hypothetical protein XP_002494178.1 1406638 R 644223 CDS PAS_chr4_0737 254574140 8201020 complement(1408096..1409004) 1 NC_012966.1 Mitochondrial NADH-cytochrome b5 reductase, involved in ergosterol biosynthesis 1409004 8201020 PAS_chr4_0737 Pichia pastoris GS115 Mitochondrial NADH-cytochrome b5 reductase, involved in ergosterol biosynthesis XP_002494179.1 1408096 R 644223 CDS PAS_chr4_0738 254574142 8200632 1409454..1410455 1 NC_012966.1 Putative protein of unknown function 1410455 8200632 PAS_chr4_0738 Pichia pastoris GS115 Putative protein of unknown function XP_002494180.1 1409454 D 644223 CDS PAS_chr4_0739 254574144 8200633 complement(1410471..1411064) 1 NC_012966.1 Putative mitochondrial ribosomal protein, has similarity to E. coli ribosomal protein S2 1411064 8200633 PAS_chr4_0739 Pichia pastoris GS115 Putative mitochondrial ribosomal protein, has similarity to E. coli ribosomal protein S2 XP_002494181.1 1410471 R 644223 CDS PAS_chr4_0741 254574146 8200634 complement(1412427..1413338) 1 NC_012966.1 Alpha subunit of Type II geranylgeranyltransferase 1413338 8200634 PAS_chr4_0741 Pichia pastoris GS115 Alpha subunit of Type II geranylgeranyltransferase XP_002494182.1 1412427 R 644223 CDS PAS_chr4_0742 254574148 8200635 1413819..1415756 1 NC_012966.1 Essential component of pre-40S ribosomes 1415756 8200635 PAS_chr4_0742 Pichia pastoris GS115 Essential component of pre-40S ribosomes XP_002494183.1 1413819 D 644223 CDS PAS_chr4_0743 254574150 8200636 1416145..1417392 1 NC_012966.1 hypothetical protein 1417392 8200636 PAS_chr4_0743 Pichia pastoris GS115 hypothetical protein XP_002494184.1 1416145 D 644223 CDS PAS_chr4_0744 254574152 8200637 complement(1417522..1418109) 1 NC_012966.1 Mitochondrial inner membrane protein required for assembly of the cytochrome c oxidase complex 1418109 8200637 PAS_chr4_0744 Pichia pastoris GS115 Mitochondrial inner membrane protein required for assembly of the cytochrome c oxidase complex XP_002494185.1 1417522 R 644223 CDS PAS_chr4_0745 254574154 8200638 1418261..1420066 1 NC_012966.1 Subunit of TFIIH and nucleotide excision repair factor 3 complexes 1420066 8200638 PAS_chr4_0745 Pichia pastoris GS115 Subunit of TFIIH and nucleotide excision repair factor 3 complexes XP_002494186.1 1418261 D 644223 CDS PAS_chr4_0746 254574156 8200639 complement(1420082..1422127) 1 NC_012966.1 Auxilin-like protein involved in vesicular transport 1422127 8200639 PAS_chr4_0746 Pichia pastoris GS115 Auxilin-like protein involved in vesicular transport XP_002494187.1 1420082 R 644223 CDS PAS_chr4_0747 254574158 8200640 1422306..1422491 1 NC_012966.1 Constituent of small nucleolar ribonucleoprotein particles containing H/ACA-type snoRNAs 1422491 8200640 PAS_chr4_0747 Pichia pastoris GS115 Constituent of small nucleolar ribonucleoprotein particles containing H/ACA-type snoRNAs XP_002494188.1 1422306 D 644223 CDS PAS_chr4_0748 254574160 8200641 complement(join(1422765..1422923,1422992..1423051)) 1 NC_012966.1 hypothetical protein 1423051 8200641 PAS_chr4_0748 Pichia pastoris GS115 hypothetical protein XP_002494189.1 1422765 R 644223 CDS PAS_chr4_0749 254574162 8200642 join(1423191..1423240,1423307..1424090) 1 NC_012966.1 Golgi membrane protein involved in manganese homeostasis 1424090 8200642 PAS_chr4_0749 Pichia pastoris GS115 Golgi membrane protein involved in manganese homeostasis XP_002494190.1 1423191 D 644223 CDS PAS_chr4_0750 254574164 8200643 complement(1424122..1424697) 1 NC_012966.1 hypothetical protein 1424697 8200643 PAS_chr4_0750 Pichia pastoris GS115 hypothetical protein XP_002494191.1 1424122 R 644223 CDS PAS_chr4_0751 254574166 8200644 complement(1424823..1426913) 1 NC_012966.1 Subunit of the telomeric Ku complex (Yku70p-Yku80p), involved in telomere length maintenance 1426913 8200644 PAS_chr4_0751 Pichia pastoris GS115 Subunit of the telomeric Ku complex (Yku70p-Yku80p), involved in telomere length maintenance XP_002494192.1 1424823 R 644223 CDS PAS_chr4_0752 254574168 8200645 1427053..1428201 1 NC_012966.1 hypothetical protein 1428201 8200645 PAS_chr4_0752 Pichia pastoris GS115 hypothetical protein XP_002494193.1 1427053 D 644223 CDS PAS_chr4_0753 254574170 8200646 complement(1428215..1428916) 1 NC_012966.1 hypothetical protein 1428916 8200646 PAS_chr4_0753 Pichia pastoris GS115 hypothetical protein XP_002494194.1 1428215 R 644223 CDS PAS_chr4_0754 254574172 8200647 complement(1429122..1429979) 1 NC_012966.1 Peroxisomal 2,4-dienoyl-CoA reductase, auxiliary enzyme of fatty acid beta-oxidation 1429979 8200647 PAS_chr4_0754 Pichia pastoris GS115 Peroxisomal 2,4-dienoyl-CoA reductase, auxiliary enzyme of fatty acid beta-oxidation XP_002494195.1 1429122 R 644223 CDS PAS_chr4_0988 254574174 8200648 complement(1430476..1431354) 1 NC_012966.1 hypothetical protein 1431354 8200648 PAS_chr4_0988 Pichia pastoris GS115 hypothetical protein XP_002494196.1 1430476 R 644223 CDS PAS_chr4_0755 254574176 8201021 complement(1431799..1432611) 1 NC_012966.1 hypothetical protein 1432611 8201021 PAS_chr4_0755 Pichia pastoris GS115 hypothetical protein XP_002494197.1 1431799 R 644223 CDS PAS_chr4_0756 254574178 8200649 1432969..1434507 1 NC_012966.1 Mitochondrial protein kinase 1434507 8200649 PAS_chr4_0756 Pichia pastoris GS115 Mitochondrial protein kinase XP_002494198.1 1432969 D 644223 CDS PAS_chr4_0757 254574180 8200650 complement(1434633..1435769) 1 NC_012966.1 Putative protein of unknown function with similarity to dehydrogenases from other model organisms 1435769 8200650 PAS_chr4_0757 Pichia pastoris GS115 Putative protein of unknown function with similarity to dehydrogenases from other model organisms XP_002494199.1 1434633 R 644223 CDS PAS_chr4_0989 254574182 8200651 complement(1436277..1438196) 1 NC_012966.1 hypothetical protein 1438196 8200651 PAS_chr4_0989 Pichia pastoris GS115 hypothetical protein XP_002494200.1 1436277 R 644223 CDS PAS_chr4_0758 254574184 8201022 complement(1438546..1439442) 1 NC_012966.1 Integral membrane protein localized to late Golgi vesicles along with the v-SNARE Tlg2p 1439442 8201022 PAS_chr4_0758 Pichia pastoris GS115 Integral membrane protein localized to late Golgi vesicles along with the v-SNARE Tlg2p XP_002494201.1 1438546 R 644223 CDS PAS_chr4_0759 254574186 8200652 complement(1439626..1440855) 1 NC_012966.1 C3HC4-type RING-finger peroxisomal membrane peroxin 1440855 8200652 PAS_chr4_0759 Pichia pastoris GS115 C3HC4-type RING-finger peroxisomal membrane peroxin XP_002494202.1 1439626 R 644223 CDS PAS_chr4_0760 254574188 8200653 complement(1441051..1442790) 1 NC_012966.1 Protein required for transcription of rDNA by RNA polymerase I 1442790 8200653 PAS_chr4_0760 Pichia pastoris GS115 Protein required for transcription of rDNA by RNA polymerase I XP_002494203.1 1441051 R 644223 CDS PAS_chr4_0761 254574190 8200654 1443178..1448550 1 NC_012966.1 Major component of the proteasome 1448550 8200654 PAS_chr4_0761 Pichia pastoris GS115 Major component of the proteasome XP_002494204.1 1443178 D 644223 CDS PAS_chr4_0762 254574192 8200655 complement(1448612..1449544) 1 NC_012966.1 Ubiquitin 1449544 8200655 PAS_chr4_0762 Pichia pastoris GS115 Ubiquitin XP_002494205.1 1448612 R 644223 CDS PAS_chr4_0763 254574194 8200656 complement(1450112..1451116) 1 NC_012966.1 Protein containing an N-terminal epsin-like domain 1451116 8200656 PAS_chr4_0763 Pichia pastoris GS115 Protein containing an N-terminal epsin-like domain XP_002494206.1 1450112 R 644223 CDS PAS_chr4_0764 254574196 8200657 complement(join(1451286..1452694,1452749..1452761)) 1 NC_012966.1 Splicing factor associated with the spliceosome 1452761 8200657 PAS_chr4_0764 Pichia pastoris GS115 Splicing factor associated with the spliceosome XP_002494207.1 1451286 R 644223 CDS PAS_chr4_0765 254574198 8200544 1452892..1453833 1 NC_012966.1 Putative protein of unknown function 1453833 8200544 PAS_chr4_0765 Pichia pastoris GS115 Putative protein of unknown function XP_002494208.1 1452892 D 644223 CDS PAS_chr4_0766 254574200 8200545 complement(1453891..1454196) 1 NC_012966.1 hypothetical protein 1454196 8200545 PAS_chr4_0766 Pichia pastoris GS115 hypothetical protein XP_002494209.1 1453891 R 644223 CDS PAS_chr4_0767 254574202 8200546 join(1454285..1454520,1454654..1454996) 1 NC_012966.1 hypothetical protein 1454996 8200546 PAS_chr4_0767 Pichia pastoris GS115 hypothetical protein XP_002494210.1 1454285 D 644223 CDS PAS_chr4_0769 254574204 8200547 1458322..1460340 1 NC_012966.1 F-box protein component of the SCF ubiquitin-ligase complex 1460340 8200547 PAS_chr4_0769 Pichia pastoris GS115 F-box protein component of the SCF ubiquitin-ligase complex XP_002494211.1 1458322 D 644223 CDS PAS_chr4_0770 254574206 8200548 complement(1460435..1464355) 1 NC_012966.1 hypothetical protein 1464355 8200548 PAS_chr4_0770 Pichia pastoris GS115 hypothetical protein XP_002494212.1 1460435 R 644223 CDS PAS_chr4_0990 254574208 8200549 join(1464570..1464581,1464656..1466014) 1 NC_012966.1 hypothetical protein 1466014 8200549 PAS_chr4_0990 Pichia pastoris GS115 hypothetical protein XP_002494213.1 1464570 D 644223 CDS PAS_chr4_0771 254574210 8201023 1466126..1467307 1 NC_012966.1 Translation initiation factor eIF-5 1467307 8201023 PAS_chr4_0771 Pichia pastoris GS115 Translation initiation factor eIF-5 XP_002494214.1 1466126 D 644223 CDS PAS_chr4_0772 254574212 8200550 complement(1467389..1468600) 1 NC_012966.1 Subunit of the Cop9 signalosome 1468600 8200550 PAS_chr4_0772 Pichia pastoris GS115 Subunit of the Cop9 signalosome XP_002494215.1 1467389 R 644223 CDS PAS_chr4_0773 254574214 8200551 1469143..1469952 1 NC_012966.1 hypothetical protein 1469952 8200551 PAS_chr4_0773 Pichia pastoris GS115 hypothetical protein XP_002494216.1 1469143 D 644223 CDS PAS_chr4_0774 254574216 8200552 complement(1470039..1470380) 1 NC_012966.1 hypothetical protein 1470380 8200552 PAS_chr4_0774 Pichia pastoris GS115 hypothetical protein XP_002494217.1 1470039 R 644223 CDS PAS_chr4_0991 254574218 8200553 1470715..1471590 1 NC_012966.1 hypothetical protein 1471590 8200553 PAS_chr4_0991 Pichia pastoris GS115 hypothetical protein XP_002494218.1 1470715 D 644223 CDS PAS_chr4_0775 254574220 8201024 join(1471787..1471808,1471864..1472477) 1 NC_012966.1 HDEL receptor, an integral membrane protein that binds to the HDEL motif in proteins 1472477 8201024 PAS_chr4_0775 Pichia pastoris GS115 HDEL receptor, an integral membrane protein that binds to the HDEL motif in proteins XP_002494219.1 1471787 D 644223 CDS PAS_chr4_0776 254574222 8200554 complement(join(1472544..1473190,1473264..1473348)) 1 NC_012966.1 Beta 6 subunit of the 20S proteasome 1473348 8200554 PAS_chr4_0776 Pichia pastoris GS115 Beta 6 subunit of the 20S proteasome XP_002494220.1 1472544 R 644223 CDS PAS_chr4_0777 254574224 8200555 1473751..1476009 1 NC_012966.1 Protein O-mannosyltransferase, transfers mannose from dolichyl phosphate-D-mannose 1476009 8200555 PAS_chr4_0777 Pichia pastoris GS115 Protein O-mannosyltransferase, transfers mannose from dolichyl phosphate-D-mannose XP_002494221.1 1473751 D 644223 CDS PAS_chr4_0778 254574226 8200556 complement(1476041..1478410) 1 NC_012966.1 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA 1478410 8200556 PAS_chr4_0778 Pichia pastoris GS115 Subunit of Elongator complex, which is required for modification of wobble nucleosides in tRNA XP_002494222.1 1476041 R 644223 CDS PAS_chr4_0992 254574228 8200557 complement(1478631..1479464) 1 NC_012966.1 hypothetical protein 1479464 8200557 PAS_chr4_0992 Pichia pastoris GS115 hypothetical protein XP_002494223.1 1478631 R 644223 CDS PAS_chr4_0779 254574230 8201025 complement(1479598..1481271) 1 NC_012966.1 Putative protein of unknown function 1481271 8201025 PAS_chr4_0779 Pichia pastoris GS115 Putative protein of unknown function XP_002494224.1 1479598 R 644223 CDS PAS_chr4_0780 254574232 8200558 complement(join(1481393..1481654,1481783..1482354)) 1 NC_012966.1 Enoyl reductase that catalyzes the last step in each cycle of very long chain fatty acid elongation 1482354 8200558 PAS_chr4_0780 Pichia pastoris GS115 Enoyl reductase that catalyzes the last step in each cycle of very long chain fatty acid elongation XP_002494225.1 1481393 R 644223 CDS PAS_chr4_0781 254574234 8200559 1482545..1482892 1 NC_012966.1 hypothetical protein 1482892 8200559 PAS_chr4_0781 Pichia pastoris GS115 hypothetical protein XP_002494226.1 1482545 D 644223 CDS PAS_chr4_0782 254574236 8200560 complement(1482998..1483618) 1 NC_012966.1 hypothetical protein 1483618 8200560 PAS_chr4_0782 Pichia pastoris GS115 hypothetical protein XP_002494227.1 1482998 R 644223 CDS PAS_chr4_0783 254574238 8200561 complement(1483780..1485645) 1 NC_012966.1 Glycerol kinase, converts glycerol to glycerol-3-phosphate 1485645 8200561 PAS_chr4_0783 Pichia pastoris GS115 Glycerol kinase, converts glycerol to glycerol-3-phosphate XP_002494228.1 1483780 R 644223 CDS PAS_chr4_0784 254574240 8200562 1487012..1487992 1 NC_012966.1 Putative channel-like protein 1487992 8200562 PAS_chr4_0784 Pichia pastoris GS115 Putative channel-like protein XP_002494229.1 1487012 D 644223 CDS PAS_chr4_0785 254574242 8200563 1489187..1490302 1 NC_012966.1 Glutamine synthetase (GS), synthesizes glutamine from glutamate and ammonia 1490302 8200563 PAS_chr4_0785 Pichia pastoris GS115 Glutamine synthetase (GS), synthesizes glutamine from glutamate and ammonia XP_002494230.1 1489187 D 644223 CDS PAS_chr4_0786 254574244 8200564 complement(1490488..1490952) 1 NC_012966.1 Cytosolic superoxide dismutase 1490952 8200564 PAS_chr4_0786 Pichia pastoris GS115 Cytosolic superoxide dismutase XP_002494231.1 1490488 R 644223 CDS PAS_chr4_0787 254574246 8200565 complement(1491415..1492347) 1 NC_012966.1 Putative protein of unknown function 1492347 8200565 PAS_chr4_0787 Pichia pastoris GS115 Putative protein of unknown function XP_002494232.1 1491415 R 644223 CDS PAS_chr4_0788 254574248 8200566 1492561..1493328 1 NC_012966.1 Mitochondrial ribosomal protein of the small subunit 1493328 8200566 PAS_chr4_0788 Pichia pastoris GS115 Mitochondrial ribosomal protein of the small subunit XP_002494233.1 1492561 D 644223 CDS PAS_chr4_0789 254574250 8200567 complement(1493382..1493951) 1 NC_012966.1 hypothetical protein 1493951 8200567 PAS_chr4_0789 Pichia pastoris GS115 hypothetical protein XP_002494234.1 1493382 R 644223 CDS PAS_chr4_0993 254574252 8200568 1494099..1494659 1 NC_012966.1 hypothetical protein 1494659 8200568 PAS_chr4_0993 Pichia pastoris GS115 hypothetical protein XP_002494235.1 1494099 D 644223 CDS PAS_chr4_0994 254574254 8201026 1495061..1496788 1 NC_012966.1 hypothetical protein 1496788 8201026 PAS_chr4_0994 Pichia pastoris GS115 hypothetical protein XP_002494236.1 1495061 D 644223 CDS PAS_chr4_0995 254574256 8201027 1496974..1498182 1 NC_012966.1 hypothetical protein 1498182 8201027 PAS_chr4_0995 Pichia pastoris GS115 hypothetical protein XP_002494237.1 1496974 D 644223 CDS PAS_chr4_0790 254574258 8201028 1499066..1502320 1 NC_012966.1 Vacuolar alpha mannosidase, involved in free oligosaccharide (fOS) degradation 1502320 8201028 PAS_chr4_0790 Pichia pastoris GS115 Vacuolar alpha mannosidase, involved in free oligosaccharide (fOS) degradation XP_002494238.1 1499066 D 644223 CDS PAS_chr4_0791 254574260 8200569 1502389..1503438 1 NC_012966.1 Beta subunit of geranylgeranyltransferase type I 1503438 8200569 PAS_chr4_0791 Pichia pastoris GS115 Beta subunit of geranylgeranyltransferase type I XP_002494239.1 1502389 D 644223 CDS PAS_chr4_0792 254574262 8200570 complement(1503511..1504404) 1 NC_012966.1 Putative mitochondrial transport protein 1504404 8200570 PAS_chr4_0792 Pichia pastoris GS115 Putative mitochondrial transport protein XP_002494240.1 1503511 R 644223 CDS PAS_chr4_0793 254574264 8200571 complement(1504608..1505486) 1 NC_012966.1 hypothetical protein 1505486 8200571 PAS_chr4_0793 Pichia pastoris GS115 hypothetical protein XP_002494241.1 1504608 R 644223 CDS PAS_chr4_0794 254574266 8200572 1505725..1507002 1 NC_012966.1 Peroxisomal membrane peroxin that is a central component of the peroxisomal protein import machinery 1507002 8200572 PAS_chr4_0794 Pichia pastoris GS115 Peroxisomal membrane peroxin that is a central component of the peroxisomal protein import machinery XP_002494242.1 1505725 D 644223 CDS PAS_chr4_0795 254574268 8200573 1507564..1509642 1 NC_012966.1 Homoaconitase, catalyzes the conversion of homocitrate to homoisocitrate, which is a step in the lys 1509642 8200573 PAS_chr4_0795 Pichia pastoris GS115 Homoaconitase, catalyzes the conversion of homocitrate to homoisocitrate, which is a step in the lys XP_002494243.1 1507564 D 644223 CDS PAS_chr4_0796 254574270 8200574 complement(1509755..1510219) 1 NC_012966.1 Nuclear protein related to mammalian high mobility group (HMG) proteins 1510219 8200574 PAS_chr4_0796 Pichia pastoris GS115 Nuclear protein related to mammalian high mobility group (HMG) proteins XP_002494244.1 1509755 R 644223 CDS PAS_chr4_0797 254574272 8200575 1510438..1513497 1 NC_012966.1 hypothetical protein 1513497 8200575 PAS_chr4_0797 Pichia pastoris GS115 hypothetical protein XP_002494245.1 1510438 D 644223 CDS PAS_chr4_0798 254574274 8200576 join(1513629..1513661,1513714..1516527) 1 NC_012966.1 Essential beta-coat protein of the COPI coatomer 1516527 8200576 PAS_chr4_0798 Pichia pastoris GS115 Essential beta-coat protein of the COPI coatomer XP_002494246.1 1513629 D 644223 CDS PAS_chr4_0799 254574276 8200577 complement(1516602..1517498) 1 NC_012966.1 Mitochondrial ribosomal protein of the large subunit 1517498 8200577 PAS_chr4_0799 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002494247.1 1516602 R 644223 CDS PAS_chr4_0800 254574278 8200578 1517673..1519151 1 NC_012966.1 Cytoplasmic nucleoporin required for polyadenylated RNA export but not for protein import 1519151 8200578 PAS_chr4_0800 Pichia pastoris GS115 Cytoplasmic nucleoporin required for polyadenylated RNA export but not for protein import XP_002494248.1 1517673 D 644223 CDS PAS_chr4_0996 254574280 8200579 join(1519302..1519313,1519340..1519867) 1 NC_012966.1 hypothetical protein 1519867 8200579 PAS_chr4_0996 Pichia pastoris GS115 hypothetical protein XP_002494249.1 1519302 D 644223 CDS PAS_chr4_0801 254574282 8201029 complement(1519915..1520820) 1 NC_012966.1 Putative protein of unknown function 1520820 8201029 PAS_chr4_0801 Pichia pastoris GS115 Putative protein of unknown function XP_002494250.1 1519915 R 644223 CDS PAS_chr4_0802 254574284 8200580 1521435..1523291 1 NC_012966.1 Putative protein of unknown function 1523291 8200580 PAS_chr4_0802 Pichia pastoris GS115 Putative protein of unknown function XP_002494251.1 1521435 D 644223 CDS PAS_chr4_0803 254574286 8200581 complement(1523306..1524187) 1 NC_012966.1 Nucleolar protein involved in the assembly of the large ribosomal subunit 1524187 8200581 PAS_chr4_0803 Pichia pastoris GS115 Nucleolar protein involved in the assembly of the large ribosomal subunit XP_002494252.1 1523306 R 644223 CDS PAS_chr4_0804 254574288 8200582 complement(1524349..1524762) 1 NC_012966.1 hypothetical protein 1524762 8200582 PAS_chr4_0804 Pichia pastoris GS115 hypothetical protein XP_002494253.1 1524349 R 644223 CDS PAS_chr4_0805 254574290 8201207 1524914..1526371 1 NC_012966.1 U1 snRNP protein involved in splicing, required for U1 snRNP biogenesis 1526371 8201207 PAS_chr4_0805 Pichia pastoris GS115 U1 snRNP protein involved in splicing, required for U1 snRNP biogenesis XP_002494254.1 1524914 D 644223 CDS PAS_chr4_0806 254574292 8201208 complement(1526379..1528430) 1 NC_012966.1 NADP-cytochrome P450 reductase 1528430 8201208 PAS_chr4_0806 Pichia pastoris GS115 NADP-cytochrome P450 reductase XP_002494255.1 1526379 R 644223 CDS PAS_chr4_0807 254574294 8201209 complement(1528670..1529365) 1 NC_012966.1 hypothetical protein 1529365 8201209 PAS_chr4_0807 Pichia pastoris GS115 hypothetical protein XP_002494256.1 1528670 R 644223 CDS PAS_chr4_0808 254574296 8201210 1529744..1530709 1 NC_012966.1 Nucleolar protein, component of the small subunit processome complex, which is required for processi 1530709 8201210 PAS_chr4_0808 Pichia pastoris GS115 Nucleolar protein, component of the small subunit processome complex, which is required for processi XP_002494257.1 1529744 D 644223 CDS PAS_chr4_0997 254574298 8201211 1530846..1532285 1 NC_012966.1 hypothetical protein 1532285 8201211 PAS_chr4_0997 Pichia pastoris GS115 hypothetical protein XP_002494258.1 1530846 D 644223 CDS PAS_chr4_0809 254574300 8201030 complement(1532287..1533288) 1 NC_012966.1 hypothetical protein 1533288 8201030 PAS_chr4_0809 Pichia pastoris GS115 hypothetical protein XP_002494259.1 1532287 R 644223 CDS PAS_chr4_0810 254574302 8201212 join(1533974..1533988,1534047..1535210) 1 NC_012966.1 hypothetical protein 1535210 8201212 PAS_chr4_0810 Pichia pastoris GS115 hypothetical protein XP_002494260.1 1533974 D 644223 CDS PAS_chr4_0811 254574304 8201213 1535317..1535898 1 NC_012966.1 Vacuolar membrane protein of unknown function involved in vacuolar protein sorting 1535898 8201213 PAS_chr4_0811 Pichia pastoris GS115 Vacuolar membrane protein of unknown function involved in vacuolar protein sorting XP_002494261.1 1535317 D 644223 CDS PAS_chr4_0812 254574306 8201214 complement(1535901..1537016) 1 NC_012966.1 Protein serine/threonine/tyrosine (dual-specificity) kinase 1537016 8201214 PAS_chr4_0812 Pichia pastoris GS115 Protein serine/threonine/tyrosine (dual-specificity) kinase XP_002494262.1 1535901 R 644223 CDS PAS_chr4_0813 254574308 8201215 1537219..1537860 1 NC_012966.1 Mitochondrial ribosomal protein of the small subunit 1537860 8201215 PAS_chr4_0813 Pichia pastoris GS115 Mitochondrial ribosomal protein of the small subunit XP_002494263.1 1537219 D 644223 CDS PAS_chr4_0814 254574310 8201216 join(1538158..1538170,1538352..1538767) 1 NC_012966.1 Primary rRNA-binding ribosomal protein component of the large (60S) ribosomal subunit 1538767 8201216 PAS_chr4_0814 Pichia pastoris GS115 Primary rRNA-binding ribosomal protein component of the large (60S) ribosomal subunit XP_002494264.1 1538158 D 644223 CDS PAS_chr4_0815 254574312 8201217 complement(1539084..1540112) 1 NC_012966.1 Mitochondrial malate dehydrogenase, catalyzes interconversion of malate and oxaloacetate 1540112 8201217 PAS_chr4_0815 Pichia pastoris GS115 Mitochondrial malate dehydrogenase, catalyzes interconversion of malate and oxaloacetate XP_002494265.1 1539084 R 644223 CDS PAS_chr4_0816 254574314 8201218 complement(1540708..1543053) 1 NC_012966.1 Neutral trehalase, degrades trehalose 1543053 8201218 PAS_chr4_0816 Pichia pastoris GS115 Neutral trehalase, degrades trehalose XP_002494266.1 1540708 R 644223 CDS PAS_chr4_0817 254574316 8201219 1543292..1543960 1 NC_012966.1 Ran GTPase binding protein 1543960 8201219 PAS_chr4_0817 Pichia pastoris GS115 Ran GTPase binding protein XP_002494267.1 1543292 D 644223 CDS PAS_chr4_0818 254574318 8201220 complement(1544091..1544933) 1 NC_012966.1 Cis-prenyltransferase involved in dolichol synthesis 1544933 8201220 PAS_chr4_0818 Pichia pastoris GS115 Cis-prenyltransferase involved in dolichol synthesis XP_002494268.1 1544091 R 644223 CDS PAS_chr4_0819 254574320 8201221 1545109..1546578 1 NC_012966.1 Hexaprenyl pyrophosphate synthetase 1546578 8201221 PAS_chr4_0819 Pichia pastoris GS115 Hexaprenyl pyrophosphate synthetase XP_002494269.1 1545109 D 644223 CDS PAS_chr4_0820 254574322 8201222 1546704..1547654 1 NC_012966.1 Putative protein of unknown function 1547654 8201222 PAS_chr4_0820 Pichia pastoris GS115 Putative protein of unknown function XP_002494270.1 1546704 D 644223 CDS PAS_chr4_0821 254574324 8201223 complement(1547751..1549742) 1 NC_012966.1 Alcohol oxidase 1549742 8201223 PAS_chr4_0821 Pichia pastoris GS115 Alcohol oxidase XP_002494271.1 1547751 R 644223 CDS PAS_chr4_0823 254574326 8201224 1550741..1552069 1 NC_012966.1 Polyamine oxidase, converts spermine to spermidine 1552069 8201224 PAS_chr4_0823 Pichia pastoris GS115 Polyamine oxidase, converts spermine to spermidine XP_002494272.1 1550741 D 644223 CDS PAS_chr4_0824 254574328 8201225 complement(1552077..1553639) 1 NC_012966.1 Protein required for resistance to the antifungal drug ciclopirox olamine 1553639 8201225 PAS_chr4_0824 Pichia pastoris GS115 Protein required for resistance to the antifungal drug ciclopirox olamine XP_002494273.1 1552077 R 644223 CDS PAS_chr4_0826 254574330 8201226 complement(1555887..1556894) 1 NC_012966.1 RNA polymerase subunit, common to RNA polymerase I and III 1556894 8201226 PAS_chr4_0826 Pichia pastoris GS115 RNA polymerase subunit, common to RNA polymerase I and III XP_002494274.1 1555887 R 644223 CDS PAS_chr4_0827 254574332 8201227 1557071..1558531 1 NC_012966.1 hypothetical protein 1558531 8201227 PAS_chr4_0827 Pichia pastoris GS115 hypothetical protein XP_002494275.1 1557071 D 644223 CDS PAS_chr4_0828 254574334 8201228 1559358..1561235 1 NC_012966.1 Myo-inositol transporter with strong similarity to the minor myo-inositol transporter Itr2p 1561235 8201228 PAS_chr4_0828 Pichia pastoris GS115 Myo-inositol transporter with strong similarity to the minor myo-inositol transporter Itr2p XP_002494276.1 1559358 D 644223 CDS PAS_chr4_0829 254574336 8201229 complement(1561261..1561977) 1 NC_012966.1 Putative protein of unknown function 1561977 8201229 PAS_chr4_0829 Pichia pastoris GS115 Putative protein of unknown function XP_002494277.1 1561261 R 644223 CDS PAS_chr4_0830 254574338 8201230 complement(1562149..1563540) 1 NC_012966.1 Kynurenine 3-mono oxygenase 1563540 8201230 PAS_chr4_0830 Pichia pastoris GS115 Kynurenine 3-mono oxygenase XP_002494278.1 1562149 R 644223 CDS PAS_chr4_0831 254574340 8201231 complement(1563689..1567258) 1 NC_012966.1 Possible U3 snoRNP protein involved in maturation of pre-18S rRNA 1567258 8201231 PAS_chr4_0831 Pichia pastoris GS115 Possible U3 snoRNP protein involved in maturation of pre-18S rRNA XP_002494279.1 1563689 R 644223 CDS PAS_chr4_0832 254574342 8201232 1567715..1572226 1 NC_012966.1 Plasma membrane ATP-binding cassette (ABC) transporter 1572226 8201232 PAS_chr4_0832 Pichia pastoris GS115 Plasma membrane ATP-binding cassette (ABC) transporter XP_002494280.1 1567715 D 644223 CDS PAS_chr4_0998 254574344 8201233 1572514..1573782 1 NC_012966.1 hypothetical protein 1573782 8201233 PAS_chr4_0998 Pichia pastoris GS115 hypothetical protein XP_002494281.1 1572514 D 644223 CDS PAS_chr4_0833 254574346 8200503 1574853..1576949 1 NC_012966.1 Protein that interacts with silencing proteins at the telomere 1576949 8200503 PAS_chr4_0833 Pichia pastoris GS115 Protein that interacts with silencing proteins at the telomere XP_002494282.1 1574853 D 644223 CDS PAS_chr4_0834 254574348 8201234 complement(1576944..1577858) 1 NC_012966.1 hypothetical protein 1577858 8201234 PAS_chr4_0834 Pichia pastoris GS115 hypothetical protein XP_002494283.1 1576944 R 644223 CDS PAS_chr4_0835 254574350 8201235 1578060..1578773 1 NC_012966.1 Protein required for respiratory growth and stability of the mitochondrial genome 1578773 8201235 PAS_chr4_0835 Pichia pastoris GS115 Protein required for respiratory growth and stability of the mitochondrial genome XP_002494284.1 1578060 D 644223 CDS PAS_chr4_0836 254574352 8201236 complement(1578851..1580788) 1 NC_012966.1 Polyamine transport protein, recognizes spermine, putrescine, and spermidine 1580788 8201236 PAS_chr4_0836 Pichia pastoris GS115 Polyamine transport protein, recognizes spermine, putrescine, and spermidine XP_002494285.1 1578851 R 644223 CDS PAS_chr4_0837 254574354 8201237 1581324..1581995 1 NC_012966.1 hypothetical protein 1581995 8201237 PAS_chr4_0837 Pichia pastoris GS115 hypothetical protein XP_002494286.1 1581324 D 644223 CDS PAS_chr4_0838 254574356 8201238 complement(1582070..1582285) 1 NC_012966.1 hypothetical protein 1582285 8201238 PAS_chr4_0838 Pichia pastoris GS115 hypothetical protein XP_002494287.1 1582070 R 644223 CDS PAS_chr4_0840 254574358 8201239 1584951..1585346 1 NC_012966.1 Cytoplasmic glutaredoxin, thioltransferase, glutathione-dependent disulfide oxidoreductase 1585346 8201239 PAS_chr4_0840 Pichia pastoris GS115 Cytoplasmic glutaredoxin, thioltransferase, glutathione-dependent disulfide oxidoreductase XP_002494288.1 1584951 D 644223 CDS PAS_chr4_0841 254574360 8201240 1585740..1586879 1 NC_012966.1 hypothetical protein 1586879 8201240 PAS_chr4_0841 Pichia pastoris GS115 hypothetical protein XP_002494289.1 1585740 D 644223 CDS PAS_chr4_0842 254574362 8201241 1587065..1588027 1 NC_012966.1 Monomeric glyoxalase I 1588027 8201241 PAS_chr4_0842 Pichia pastoris GS115 Monomeric glyoxalase I XP_002494290.1 1587065 D 644223 CDS PAS_chr4_0843 254574364 8201242 complement(1588080..1588463) 1 NC_012966.1 Putative protein-methionine-R-oxide reductase 1588463 8201242 PAS_chr4_0843 Pichia pastoris GS115 Putative protein-methionine-R-oxide reductase XP_002494291.1 1588080 R 644223 CDS PAS_chr4_0844 254574366 8201243 complement(join(1588618..1589474,1589614..1590172)) 1 NC_012966.1 Protein disulfide isomerase, multifunctional protein resident in the endoplasmic reticulum lumen 1590172 8201243 PAS_chr4_0844 Pichia pastoris GS115 Protein disulfide isomerase, multifunctional protein resident in the endoplasmic reticulum lumen XP_002494292.1 1588618 R 644223 CDS PAS_chr4_0845 254574368 8201244 complement(1590427..1590966) 1 NC_012966.1 Mitochondrial ribosomal protein of the large subunit 1590966 8201244 PAS_chr4_0845 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002494293.1 1590427 R 644223 CDS PAS_chr4_0846 254574370 8201245 1591358..1592308 1 NC_012966.1 Component of the septin ring of the mother-bud neck that is required for cytokinesis 1592308 8201245 PAS_chr4_0846 Pichia pastoris GS115 Component of the septin ring of the mother-bud neck that is required for cytokinesis XP_002494294.1 1591358 D 644223 CDS PAS_chr4_0847 254574372 8201246 complement(1592377..1593606) 1 NC_012966.1 Self-glucosylating initiator of glycogen synthesis, also glucosylates n-dodecyl-beta-D-maltoside 1593606 8201246 PAS_chr4_0847 Pichia pastoris GS115 Self-glucosylating initiator of glycogen synthesis, also glucosylates n-dodecyl-beta-D-maltoside XP_002494295.1 1592377 R 644223 CDS PAS_chr4_0849 254574374 8201247 complement(1594666..1596309) 1 NC_012966.1 Protein of unknown function, involved in proteasome-dependent catabolite inactivation of fructose-1 1596309 8201247 PAS_chr4_0849 Pichia pastoris GS115 Protein of unknown function, involved in proteasome-dependent catabolite inactivation of fructose-1 XP_002494296.1 1594666 R 644223 CDS PAS_chr4_0850 254574376 8201248 1596416..1597819 1 NC_012966.1 hypothetical protein 1597819 8201248 PAS_chr4_0850 Pichia pastoris GS115 hypothetical protein XP_002494297.1 1596416 D 644223 CDS PAS_chr4_0851 254574378 8201249 complement(1597949..1599073) 1 NC_012966.1 hypothetical protein 1599073 8201249 PAS_chr4_0851 Pichia pastoris GS115 hypothetical protein XP_002494298.1 1597949 R 644223 CDS PAS_chr4_0852 254574380 8201250 1600281..1601645 1 NC_012966.1 Mu1-like medium subunit of the clathrin-associated protein complex (AP-1) 1601645 8201250 PAS_chr4_0852 Pichia pastoris GS115 Mu1-like medium subunit of the clathrin-associated protein complex (AP-1) XP_002494299.1 1600281 D 644223 CDS PAS_chr4_0853 254574382 8201251 complement(1601806..1602357) 1 NC_012966.1 hypothetical protein 1602357 8201251 PAS_chr4_0853 Pichia pastoris GS115 hypothetical protein XP_002494300.1 1601806 R 644223 CDS PAS_chr4_0854 254574384 8201252 1602531..1603178 1 NC_012966.1 hypothetical protein 1603178 8201252 PAS_chr4_0854 Pichia pastoris GS115 hypothetical protein XP_002494301.1 1602531 D 644223 CDS PAS_chr4_0855 254574386 8201253 1604039..1604935 1 NC_012966.1 hypothetical protein 1604935 8201253 PAS_chr4_0855 Pichia pastoris GS115 hypothetical protein XP_002494302.1 1604039 D 644223 CDS PAS_chr4_0999 254574388 8201254 1605216..1606124 1 NC_012966.1 hypothetical protein 1606124 8201254 PAS_chr4_0999 Pichia pastoris GS115 hypothetical protein XP_002494303.1 1605216 D 644223 CDS PAS_chr4_0856 254574390 8200504 1606412..1608544 1 NC_012966.1 Component, with Yta12p, of the mitochondrial inner membrane m-AAA protease 1608544 8200504 PAS_chr4_0856 Pichia pastoris GS115 Component, with Yta12p, of the mitochondrial inner membrane m-AAA protease XP_002494304.1 1606412 D 644223 CDS PAS_chr4_0857 254574392 8201255 complement(1609309..1611123) 1 NC_012966.1 hypothetical protein 1611123 8201255 PAS_chr4_0857 Pichia pastoris GS115 hypothetical protein XP_002494305.1 1609309 R 644223 CDS PAS_chr4_0858 254574394 8201256 complement(1611566..1614118) 1 NC_012966.1 hypothetical protein 1614118 8201256 PAS_chr4_0858 Pichia pastoris GS115 hypothetical protein XP_002494306.1 1611566 R 644223 CDS PAS_chr4_0859 254574396 8201257 complement(1614291..1616315) 1 NC_012966.1 Mitochondrial inner membrane half-type ATP-binding cassette (ABC) transporter 1616315 8201257 PAS_chr4_0859 Pichia pastoris GS115 Mitochondrial inner membrane half-type ATP-binding cassette (ABC) transporter XP_002494307.1 1614291 R 644223 CDS PAS_chr4_0860 254574398 8201258 1617132..1617674 1 NC_012966.1 hypothetical protein 1617674 8201258 PAS_chr4_0860 Pichia pastoris GS115 hypothetical protein XP_002494308.1 1617132 D 644223 CDS PAS_chr4_1000 254574400 8201259 1618027..1618803 1 NC_012966.1 hypothetical protein 1618803 8201259 PAS_chr4_1000 Pichia pastoris GS115 hypothetical protein XP_002494309.1 1618027 D 644223 CDS PAS_chr4_0861 254574402 8200505 complement(1619258..1622044) 1 NC_012966.1 F-box protein involved in recycling plasma membrane proteins internalized by endocytosis 1622044 8200505 PAS_chr4_0861 Pichia pastoris GS115 F-box protein involved in recycling plasma membrane proteins internalized by endocytosis XP_002494310.1 1619258 R 644223 CDS PAS_chr4_0862 254574404 8201260 1622220..1624112 1 NC_012966.1 hypothetical protein 1624112 8201260 PAS_chr4_0862 Pichia pastoris GS115 hypothetical protein XP_002494311.1 1622220 D 644223 CDS PAS_chr4_0863 254574406 8201261 complement(1624158..1626026) 1 NC_012966.1 hypothetical protein 1626026 8201261 PAS_chr4_0863 Pichia pastoris GS115 hypothetical protein XP_002494312.1 1624158 R 644223 CDS PAS_chr4_0864 254574408 8201262 join(1626184..1626526,1626715..1627091) 1 NC_012966.1 Major mitochondrial nuclease, has RNAse and DNA endo-and exonucleolytic activities 1627091 8201262 PAS_chr4_0864 Pichia pastoris GS115 Major mitochondrial nuclease, has RNAse and DNA endo-and exonucleolytic activities XP_002494313.1 1626184 D 644223 CDS PAS_chr4_0865 254574410 8201263 1627467..1628894 1 NC_012966.1 L-homoserine-O-acetyltransferase, catalyzes the conversion of homoserine to O-acetyl homoserine 1628894 8201263 PAS_chr4_0865 Pichia pastoris GS115 L-homoserine-O-acetyltransferase, catalyzes the conversion of homoserine to O-acetyl homoserine XP_002494314.1 1627467 D 644223 CDS PAS_chr4_0866 254574412 8201264 complement(1628984..1630225) 1 NC_012966.1 Mitochondrial membrane localized inositol phosphosphingolipid phospholipase C 1630225 8201264 PAS_chr4_0866 Pichia pastoris GS115 Mitochondrial membrane localized inositol phosphosphingolipid phospholipase C XP_002494315.1 1628984 R 644223 CDS PAS_chr4_0867 254574414 8201265 1630605..1631297 1 NC_012966.1 hypothetical protein 1631297 8201265 PAS_chr4_0867 Pichia pastoris GS115 hypothetical protein XP_002494316.1 1630605 D 644223 CDS PAS_chr4_0868 254574416 8201266 complement(1631352..1632599) 1 NC_012966.1 Acetylated, cis-golgi localized protein involved in ER to Golgi transport 1632599 8201266 PAS_chr4_0868 Pichia pastoris GS115 Acetylated, cis-golgi localized protein involved in ER to Golgi transport XP_002494317.1 1631352 R 644223 CDS PAS_chr4_0869 254574418 8201267 1632757..1633143 1 NC_012966.1 Non-essential protein of unknown function 1633143 8201267 PAS_chr4_0869 Pichia pastoris GS115 Non-essential protein of unknown function XP_002494318.1 1632757 D 644223 CDS PAS_chr4_0870 254574420 8201268 complement(1634366..1635076) 1 NC_012966.1 hypothetical protein 1635076 8201268 PAS_chr4_0870 Pichia pastoris GS115 hypothetical protein XP_002494319.1 1634366 R 644223 CDS PAS_chr4_0871 254574422 8201269 1635239..1638838 1 NC_012966.1 hypothetical protein 1638838 8201269 PAS_chr4_0871 Pichia pastoris GS115 hypothetical protein XP_002494320.1 1635239 D 644223 CDS PAS_chr4_0872 254574424 8201270 complement(1638850..1639332) 1 NC_012966.1 hypothetical protein 1639332 8201270 PAS_chr4_0872 Pichia pastoris GS115 hypothetical protein XP_002494321.1 1638850 R 644223 CDS PAS_chr4_0873 254574426 8201271 join(1639563..1641796,1641871..1642699) 1 NC_012966.1 Specific translational activator for the COX1 mRNA 1642699 8201271 PAS_chr4_0873 Pichia pastoris GS115 Specific translational activator for the COX1 mRNA XP_002494322.1 1639563 D 644223 CDS PAS_chr4_0874 254574428 8201272 complement(1642725..1643270) 1 NC_012966.1 Subunit of signal peptidase complex (Spc1p, Spc2p, Spc3p, Sec11p) 1643270 8201272 PAS_chr4_0874 Pichia pastoris GS115 Subunit of signal peptidase complex (Spc1p, Spc2p, Spc3p, Sec11p) XP_002494323.1 1642725 R 644223 CDS PAS_chr4_0875 254574430 8201273 complement(1643335..1644639) 1 NC_012966.1 Putative protein of unknown function 1644639 8201273 PAS_chr4_0875 Pichia pastoris GS115 Putative protein of unknown function XP_002494324.1 1643335 R 644223 CDS PAS_chr4_0876 254574432 8201274 complement(1644740..1645933) 1 NC_012966.1 hypothetical protein 1645933 8201274 PAS_chr4_0876 Pichia pastoris GS115 hypothetical protein XP_002494325.1 1644740 R 644223 CDS PAS_chr4_0877 254574434 8201275 1646885..1647802 1 NC_012966.1 Mitochondrial dicarboxylate carrier, integral membrane protein 1647802 8201275 PAS_chr4_0877 Pichia pastoris GS115 Mitochondrial dicarboxylate carrier, integral membrane protein XP_002494326.1 1646885 D 644223 CDS PAS_chr4_0878 254574436 8201276 1648150..1648635 1 NC_012966.1 Silenced copy of ALPHA2 at HML 1648635 8201276 PAS_chr4_0878 Pichia pastoris GS115 Silenced copy of ALPHA2 at HML XP_002494327.1 1648150 D 644223 CDS PAS_chr4_1001 254574438 8201277 1649153..1649464 1 NC_012966.1 hypothetical protein 1649464 8201277 PAS_chr4_1001 Pichia pastoris GS115 hypothetical protein XP_002494328.1 1649153 D 644223 CDS PAS_chr4_0879 254574440 8200506 complement(1649568..1652702) 1 NC_012966.1 Transmembrane actin-binding protein involved in membrane cytoskeleton assembly and cell polarization 1652702 8200506 PAS_chr4_0879 Pichia pastoris GS115 Transmembrane actin-binding protein involved in membrane cytoskeleton assembly and cell polarization XP_002494329.1 1649568 R 644223 CDS PAS_chr4_0880 254574442 8201278 1653171..1653500 1 NC_012966.1 Translation initiation factor eIF1 1653500 8201278 PAS_chr4_0880 Pichia pastoris GS115 Translation initiation factor eIF1 XP_002494330.1 1653171 D 644223 CDS PAS_chr4_0881 254574444 8201279 complement(1653775..1654311) 1 NC_012966.1 hypothetical protein 1654311 8201279 PAS_chr4_0881 Pichia pastoris GS115 hypothetical protein XP_002494331.1 1653775 R 644223 CDS PAS_chr4_0883 254574446 8201280 1657559..1657756 1 NC_012966.1 hypothetical protein 1657756 8201280 PAS_chr4_0883 Pichia pastoris GS115 hypothetical protein XP_002494332.1 1657559 D 644223 CDS PAS_chr4_0884 254574448 8201289 join(1658287..1658377,1658429..1658583) 1 NC_012966.1 hypothetical protein 1658583 8201289 PAS_chr4_0884 Pichia pastoris GS115 hypothetical protein XP_002494333.1 1658287 D 644223 CDS PAS_chr4_0885 254574450 8201290 1658933..1660273 1 NC_012966.1 RNA polymerase II-associated protein 1660273 8201290 PAS_chr4_0885 Pichia pastoris GS115 RNA polymerase II-associated protein XP_002494334.1 1658933 D 644223 CDS PAS_chr4_0887 254574452 8201291 complement(1662291..1662887) 1 NC_012966.1 transcription factor 1662887 8201291 PAS_chr4_0887 Pichia pastoris GS115 transcription factor XP_002494335.1 1662291 R 644223 CDS PAS_chr4_0935 254574454 8201292 1663493..1665307 1 NC_012966.1 hypothetical protein 1665307 8201292 PAS_chr4_0935 Pichia pastoris GS115 hypothetical protein XP_002494336.1 1663493 D 644223 CDS PAS_chr4_0888 254574456 8200968 1665547..1667001 1 NC_012966.1 pH-response regulator protein 1667001 8200968 PAS_chr4_0888 Pichia pastoris GS115 pH-response regulator protein XP_002494337.1 1665547 D 644223 CDS PAS_chr4_0889 254574458 8201293 complement(1668741..1670801) 1 NC_012966.1 hypothetical protein 1670801 8201293 PAS_chr4_0889 Pichia pastoris GS115 hypothetical protein XP_002494338.1 1668741 R 644223 CDS PAS_chr4_0890 254574460 8201294 complement(1671299..1672294) 1 NC_012966.1 hypothetical protein 1672294 8201294 PAS_chr4_0890 Pichia pastoris GS115 hypothetical protein XP_002494339.1 1671299 R 644223 CDS PAS_chr4_0891 254574462 8201295 1673304..1675688 1 NC_012966.1 DNA replication licensing factor 1675688 8201295 PAS_chr4_0891 Pichia pastoris GS115 DNA replication licensing factor XP_002494340.1 1673304 D 644223 CDS PAS_chr4_0892 254574464 8201296 join(1676498..1676515,1676578..1676844) 1 NC_012966.1 mitochondrial ATP synthase 1676844 8201296 PAS_chr4_0892 Pichia pastoris GS115 mitochondrial ATP synthase XP_002494341.1 1676498 D 644223 CDS PAS_chr4_0893 254574466 8201297 1677170..1678273 1 NC_012966.1 Mitochondria protein phosphatase 1678273 8201297 PAS_chr4_0893 Pichia pastoris GS115 Mitochondria protein phosphatase XP_002494342.1 1677170 D 644223 CDS PAS_chr4_0894 254574468 8201298 complement(1678290..1681151) 1 NC_012966.1 Nonsense-mediated mRNA decay protein 2 1681151 8201298 PAS_chr4_0894 Pichia pastoris GS115 Nonsense-mediated mRNA decay protein 2 XP_002494343.1 1678290 R 644223 CDS PAS_chr4_0895 254574470 8201299 complement(1681394..1682416) 1 NC_012966.1 54S ribosomal protein L35, mitochondrial 1682416 8201299 PAS_chr4_0895 Pichia pastoris GS115 54S ribosomal protein L35, mitochondrial XP_002494344.1 1681394 R 644223 CDS PAS_chr4_0896 254574472 8201300 1683853..1685232 1 NC_012966.1 Zinc/cadmium resistance protein 1685232 8201300 PAS_chr4_0896 Pichia pastoris GS115 Zinc/cadmium resistance protein XP_002494345.1 1683853 D 644223 CDS PAS_chr4_0897 254574474 8201301 complement(1685443..1686006) 1 NC_012966.1 hypothetical protein 1686006 8201301 PAS_chr4_0897 Pichia pastoris GS115 hypothetical protein XP_002494346.1 1685443 R 644223 CDS PAS_chr4_0898 254574476 8201302 complement(1686380..1687162) 1 NC_012966.1 Cyclin 1687162 8201302 PAS_chr4_0898 Pichia pastoris GS115 Cyclin XP_002494347.1 1686380 R 644223 CDS PAS_chr4_0899 254574478 8201303 complement(1687671..1688288) 1 NC_012966.1 GTP-binding protein 1688288 8201303 PAS_chr4_0899 Pichia pastoris GS115 GTP-binding protein XP_002494348.1 1687671 R 644223 CDS PAS_chr4_0900 254574480 8201304 complement(1688719..1690557) 1 NC_012966.1 Kinesin-like protein 1690557 8201304 PAS_chr4_0900 Pichia pastoris GS115 Kinesin-like protein XP_002494349.1 1688719 R 644223 CDS PAS_chr4_0901 254574482 8201305 1690654..1691502 1 NC_012966.1 Ribosomal RNA-processing protein 1691502 8201305 PAS_chr4_0901 Pichia pastoris GS115 Ribosomal RNA-processing protein XP_002494350.1 1690654 D 644223 CDS PAS_chr4_0902 254574484 8201306 complement(1692402..1693583) 1 NC_012966.1 RNAP II-associated protein 1693583 8201306 PAS_chr4_0902 Pichia pastoris GS115 RNAP II-associated protein XP_002494351.1 1692402 R 644223 CDS PAS_chr4_0903 254574486 8201307 complement(1693758..1695620) 1 NC_012966.1 DNA Polymerase II Epsilon complex with BRCT domain 1695620 8201307 PAS_chr4_0903 Pichia pastoris GS115 DNA Polymerase II Epsilon complex with BRCT domain XP_002494352.1 1693758 R 644223 CDS PAS_chr4_0904 254574488 8201308 1695799..1696092 1 NC_012966.1 Mitochondrial ribosomal protein of the large subunit 1696092 8201308 PAS_chr4_0904 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002494353.1 1695799 D 644223 CDS PAS_chr4_0905 254574490 8201309 complement(1696336..1696821) 1 NC_012966.1 Mitochondrial ribosomal protein of the large subunit 1696821 8201309 PAS_chr4_0905 Pichia pastoris GS115 Mitochondrial ribosomal protein of the large subunit XP_002494354.1 1696336 R 644223 CDS PAS_chr4_0906 254574492 8201310 1697020..1697535 1 NC_012966.1 RNA polymerase II subunit 1697535 8201310 PAS_chr4_0906 Pichia pastoris GS115 RNA polymerase II subunit XP_002494355.1 1697020 D 644223 CDS PAS_chr4_0907 254574494 8201311 complement(1697639..1698541) 1 NC_012966.1 1-phosphatidylinositol phosphodiesterase 1698541 8201311 PAS_chr4_0907 Pichia pastoris GS115 1-phosphatidylinositol phosphodiesterase XP_002494356.1 1697639 R 644223 CDS PAS_chr4_0908 254574496 8201312 complement(1698697..1700475) 1 NC_012966.1 Mitochondrial distribution and morphology protein 1700475 8201312 PAS_chr4_0908 Pichia pastoris GS115 Mitochondrial distribution and morphology protein XP_002494357.1 1698697 R 644223 CDS PAS_FragD_0029 254574498 8201313 complement(join(1726397..1727836,1727899..1728327)) 1 NC_012966.1 Subunit of the NuA3 histone acetyltransferase complex that acetylates histone H3 1728327 8201313 PAS_FragD_0029 Pichia pastoris GS115 Subunit of the NuA3 histone acetyltransferase complex that acetylates histone H3 XP_002494358.1 1726397 R 644223 CDS PAS_FragD_0027 254574500 8200529 1731636..1732076 1 NC_012966.1 Adenosine 5'-monophosphoramidase 1732076 8200529 PAS_FragD_0027 Pichia pastoris GS115 Adenosine 5'-monophosphoramidase XP_002494359.1 1731636 D 644223 CDS PAS_FragD_0026 254574502 8200528 1732475..1734967 1 NC_012966.1 ATPase in ER, nuclear membrane and cytosol with homology to mammalian p97 1734967 8200528 PAS_FragD_0026 Pichia pastoris GS115 ATPase in ER, nuclear membrane and cytosol with homology to mammalian p97 XP_002494360.1 1732475 D 644223 CDS PAS_FragD_0025 254574504 8200527 complement(1735057..1735884) 1 NC_012966.1 G1 cyclin, associates with Pho85p cyclin-dependent kinase (Cdk) 1735884 8200527 PAS_FragD_0025 Pichia pastoris GS115 G1 cyclin, associates with Pho85p cyclin-dependent kinase (Cdk) XP_002494361.1 1735057 R 644223 CDS PAS_FragD_0031 254574506 8200526 complement(1736210..1737808) 1 NC_012966.1 hypothetical protein 1737808 8200526 PAS_FragD_0031 Pichia pastoris GS115 hypothetical protein XP_002494362.1 1736210 R 644223 CDS PAS_FragD_0024 254574508 8200530 complement(1737981..1739156) 1 NC_012966.1 Vacuolar H+/Ca2+ exchanger involved in control of cytosolic Ca2+ concentration 1739156 8200530 PAS_FragD_0024 Pichia pastoris GS115 Vacuolar H+/Ca2+ exchanger involved in control of cytosolic Ca2+ concentration XP_002494363.1 1737981 R 644223 CDS PAS_FragD_0023 254574510 8200525 complement(1739637..1740686) 1 NC_012966.1 hypothetical protein 1740686 8200525 PAS_FragD_0023 Pichia pastoris GS115 hypothetical protein XP_002494364.1 1739637 R 644223 CDS PAS_FragD_0022 254574512 8200524 1740825..1742225 1 NC_012966.1 Deletion mutant is synthetically lethal with MEN mutants 1742225 8200524 PAS_FragD_0022 Pichia pastoris GS115 Deletion mutant is synthetically lethal with MEN mutants XP_002494365.1 1740825 D 644223 CDS PAS_FragD_0021 254574514 8200523 complement(1742209..1744083) 1 NC_012966.1 hypothetical protein 1744083 8200523 PAS_FragD_0021 Pichia pastoris GS115 hypothetical protein XP_002494366.1 1742209 R 644223 CDS PAS_FragD_0020 254574516 8200522 1744315..1744824 1 NC_012966.1 hypothetical protein 1744824 8200522 PAS_FragD_0020 Pichia pastoris GS115 hypothetical protein XP_002494367.1 1744315 D 644223 CDS PAS_FragD_0019 254574518 8200521 1745134..1749180 1 NC_012966.1 Putative protein of unknown function 1749180 8200521 PAS_FragD_0019 Pichia pastoris GS115 Putative protein of unknown function XP_002494368.1 1745134 D 644223 CDS PAS_FragD_0018 254574520 8200520 complement(join(1749754..1754658,1754718..1754762)) 1 NC_012966.1 Catalytic subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation 1754762 8200520 PAS_FragD_0018 Pichia pastoris GS115 Catalytic subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation XP_002494369.1 1749754 R 644223 CDS PAS_FragD_0017 254574522 8200519 complement(1754955..1755482) 1 NC_012966.1 hypothetical protein 1755482 8200519 PAS_FragD_0017 Pichia pastoris GS115 hypothetical protein XP_002494370.1 1754955 R 644223 CDS PAS_FragD_0016 254574524 8200518 complement(1755743..1757125) 1 NC_012966.1 TFIID subunit (67 kDa), involved in RNA polymerase II transcription initiation 1757125 8200518 PAS_FragD_0016 Pichia pastoris GS115 TFIID subunit (67 kDa), involved in RNA polymerase II transcription initiation XP_002494371.1 1755743 R 644223 CDS PAS_FragD_0015 254574526 8200517 1757223..1758275 1 NC_012966.1 Mitochondrial RNA polymerase specificity factor 1758275 8200517 PAS_FragD_0015 Pichia pastoris GS115 Mitochondrial RNA polymerase specificity factor XP_002494372.1 1757223 D 644223 CDS PAS_FragD_0014 254574528 8200516 complement(1758838..1759554) 1 NC_012966.1 Protein component of the small (40S) ribosomal subunit 1759554 8200516 PAS_FragD_0014 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002494373.1 1758838 R 644223 CDS PAS_FragD_0013 254574530 8200515 complement(join(1759852..1760135,1760327..1760378)) 1 NC_012966.1 Protein component of the small (40S) ribosomal subunit 1760378 8200515 PAS_FragD_0013 Pichia pastoris GS115 Protein component of the small (40S) ribosomal subunit XP_002494374.1 1759852 R 644223 CDS PAS_FragD_0012 254574532 8200514 1760652..1761593 1 NC_012966.1 Putative protein of unknown function 1761593 8200514 PAS_FragD_0012 Pichia pastoris GS115 Putative protein of unknown function XP_002494375.1 1760652 D 644223 CDS PAS_FragD_0011 254574534 8200513 1761642..1763366 1 NC_012966.1 Sporulation-specific homolog of the yeast CDC3/10/11/12 family of bud neck microfilament genes 1763366 8200513 PAS_FragD_0011 Pichia pastoris GS115 Sporulation-specific homolog of the yeast CDC3/10/11/12 family of bud neck microfilament genes XP_002494376.1 1761642 D 644223 CDS PAS_FragD_0010 254574536 8200512 complement(1763659..1764240) 1 NC_012966.1 hypothetical protein 1764240 8200512 PAS_FragD_0010 Pichia pastoris GS115 hypothetical protein XP_002494377.1 1763659 R 644223 CDS PAS_FragD_0009 254574538 8200511 1764543..1765679 1 NC_012966.1 hypothetical protein 1765679 8200511 PAS_FragD_0009 Pichia pastoris GS115 hypothetical protein XP_002494378.1 1764543 D 644223 CDS PAS_FragD_0007 254574540 8200510 1767270..1768208 1 NC_012966.1 hypothetical protein 1768208 8200510 PAS_FragD_0007 Pichia pastoris GS115 hypothetical protein XP_002494379.1 1767270 D 644223 CDS PAS_FragD_0005 254574542 8200509 1769541..1770815 1 NC_012966.1 Vacuolar protein sorting (VPS) protein required for cytoplasm to vacuole targeting of proteins 1770815 8200509 PAS_FragD_0005 Pichia pastoris GS115 Vacuolar protein sorting (VPS) protein required for cytoplasm to vacuole targeting of proteins XP_002494380.1 1769541 D 644223 CDS PAS_FragD_0003 254574544 8200508 1772440..1774053 1 NC_012966.1 Subunit of the CCR4-NOT complex 1774053 8200508 PAS_FragD_0003 Pichia pastoris GS115 Subunit of the CCR4-NOT complex XP_002494381.1 1772440 D 644223 CDS PAS_FragD_0002 254574546 8200507 complement(1774176..1777463) 1 NC_012966.1 ER membrane protein involved in regulation of OLE1 transcription, acts with homolog Spt23p 1777463 8200507 PAS_FragD_0002 Pichia pastoris GS115 ER membrane protein involved in regulation of OLE1 transcription, acts with homolog Spt23p XP_002494382.1 1774176 R 644223 CDS