-- dump date 20111121_013825 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 264731000001 SEQ_END SEQ_END NC_014033.1 3619559 3619559 DR NC_014033.1; contig end 3619559..3619559 Prevotella ruminicola 23 YP_003573410.1 CDS PRU_0001 NC_014033.1 176 2320 R identified by similarity to SP:Q03155; adhesin-like protein complement(176..2320) Prevotella ruminicola 23 9002823 YP_003573411.1 CDS PRU_0002 NC_014033.1 2490 3605 R identified by glimmer; hypothetical protein complement(2490..3605) Prevotella ruminicola 23 9002142 YP_003573412.1 CDS PRU_0003 NC_014033.1 3686 4840 R identified by match to protein family HMM PF00691; OmpA family protein complement(3686..4840) Prevotella ruminicola 23 9002332 YP_003573413.1 CDS PRU_0004 NC_014033.1 4877 6862 R lipoprotein complement(4877..6862) Prevotella ruminicola 23 9001444 YP_003573414.1 CDS PRU_0006 NC_014033.1 7214 8209 R identified by match to protein family HMM PF03572; lipoprotein complement(7214..8209) Prevotella ruminicola 23 9002790 YP_003573415.1 CDS PRU_0007 NC_014033.1 8206 8970 R identified by similarity to GB:AAO78684.1; hypothetical protein complement(8206..8970) Prevotella ruminicola 23 8999971 YP_003573416.1 CDS PRU_0008 NC_014033.1 8954 11626 R identified by match to protein family HMM PF00521; topoisomerase gyrA/parC subunit family protein complement(8954..11626) Prevotella ruminicola 23 9002750 YP_003573417.1 CDS alaS NC_014033.1 11718 14381 R identified by similarity to SP:P00957; match to protein family HMM PF01411; match to protein family HMM PF02272; match to protein family HMM PF07973; match to protein family HMM TIGR00344; alanine--tRNA ligase complement(11718..14381) Prevotella ruminicola 23 9001971 YP_003573418.1 CDS PRU_0010 NC_014033.1 14513 14860 D identified by match to protein family HMM PF00376; MerR family transcriptional regulator 14513..14860 Prevotella ruminicola 23 9001157 YP_003573419.1 CDS mdsD_1 NC_014033.1 14896 18138 R identified by similarity to GB:AAF72523.1; match to protein family HMM PF00930; match to protein family HMM PF03572; match to protein family HMM PF07676; mucin-desulfating sulfatase complement(14896..18138) Prevotella ruminicola 23 9000322 YP_003573420.1 CDS PRU_0012 NC_014033.1 18188 19162 R identified by match to protein family HMM PF01095; pectinesterase complement(18188..19162) Prevotella ruminicola 23 9000756 YP_003573421.1 CDS PRU_0013 NC_014033.1 19177 21399 R identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; RelA/SpoT family protein complement(19177..21399) Prevotella ruminicola 23 9001934 YP_003573422.1 CDS PRU_0014 NC_014033.1 21481 22857 R identified by match to protein family HMM PF01464; match to protein family HMM PF01476; transglycosylase SLT/LysM domain-containing protein complement(21481..22857) Prevotella ruminicola 23 9001044 YP_003573423.1 CDS PRU_0015 NC_014033.1 22864 23514 R identified by similarity to GB:AAO79105.1; hypothetical protein complement(22864..23514) Prevotella ruminicola 23 9001647 YP_003573424.1 CDS PRU_0016 NC_014033.1 23557 24486 R identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; ParB-like protein complement(23557..24486) Prevotella ruminicola 23 9002237 YP_003573425.1 CDS PRU_0017 NC_014033.1 24489 25256 R identified by match to protein family HMM PF01656; ParA family ATPase complement(24489..25256) Prevotella ruminicola 23 9000526 YP_003573426.1 CDS surE NC_014033.1 25379 26149 D identified by match to protein family HMM PF01975; match to protein family HMM TIGR00087; acid phosphatase SurE 25379..26149 Prevotella ruminicola 23 9001404 YP_003573427.1 CDS lpxB NC_014033.1 26170 27279 D identified by match to protein family HMM PF02684; match to protein family HMM TIGR00215; lipid-A-disaccharide synthase 26170..27279 Prevotella ruminicola 23 9001772 YP_003573428.1 CDS PRU_0020 NC_014033.1 27331 28032 D identified by similarity to GB:AAO79577.1; hypothetical protein 27331..28032 Prevotella ruminicola 23 9002523 YP_003573429.1 CDS PRU_0022 NC_014033.1 28812 29732 R identified by match to protein family HMM PF02518; sensor histidine kinase complement(28812..29732) Prevotella ruminicola 23 9001346 YP_003573430.1 CDS PRU_0023 NC_014033.1 29736 30047 R identified by match to protein family HMM PF01740; match to protein family HMM TIGR00377; anti-anti-sigma factor complement(29736..30047) Prevotella ruminicola 23 9002558 YP_003573431.1 CDS PRU_0024 NC_014033.1 30076 30489 R identified by similarity to OMNI:NTL01SS01077; serine-protein kinase complement(30076..30489) Prevotella ruminicola 23 9001283 YP_003573432.1 CDS PRU_0025 NC_014033.1 30613 31386 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(30613..31386) Prevotella ruminicola 23 9001524 YP_003573433.1 CDS PRU_0026 NC_014033.1 31383 32138 R identified by similarity to GB:AAQ66152.1; match to protein family HMM PF02405; hypothetical protein complement(31383..32138) Prevotella ruminicola 23 9002128 YP_003573434.1 CDS PRU_0027 NC_014033.1 32276 33073 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 32276..33073 Prevotella ruminicola 23 9001534 YP_003573435.1 CDS tig NC_014033.1 33163 34524 D identified by similarity to SP:P22257; match to protein family HMM PF05697; match to protein family HMM TIGR00115; trigger factor 33163..34524 Prevotella ruminicola 23 9002319 YP_003573436.1 CDS clpP NC_014033.1 34745 35323 D identified by match to protein family HMM PF00574; ATP-dependent Clp protease proteolytic subunit ClpP 34745..35323 Prevotella ruminicola 23 8999984 YP_003573437.1 CDS clpX NC_014033.1 35329 36567 D identified by match to protein family HMM PF00004; match to protein family HMM PF06689; match to protein family HMM PF07724; match to protein family HMM TIGR00382; ATP-dependent Clp protease ATP-binding subunit ClpX 35329..36567 Prevotella ruminicola 23 9000007 YP_003573438.1 CDS recQ_1 NC_014033.1 36593 38761 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM PF09382; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389; ATP-dependent DNA helicase RecQ 36593..38761 Prevotella ruminicola 23 9000587 YP_003573439.1 CDS guaB NC_014033.1 38800 40281 D identified by similarity to SP:P50099; match to protein family HMM PF00478; match to protein family HMM PF00571; match to protein family HMM TIGR01302; inosine-5'-monophosphate dehydrogenase 38800..40281 Prevotella ruminicola 23 9002219 YP_003573440.1 CDS PRU_0033 NC_014033.1 40284 41717 D identified by match to protein family HMM PF00639; peptidylprolyl isomerase domain-containing protein 40284..41717 Prevotella ruminicola 23 9001385 YP_003573441.1 CDS PRU_0034 NC_014033.1 41735 43093 D identified by match to protein family HMM PF00639; match to protein family HMM PF09312; peptidylprolyl isomerase domain-containing protein 41735..43093 Prevotella ruminicola 23 9000886 YP_003573442.1 CDS PRU_0035 NC_014033.1 43122 44675 D identified by similarity to GB:AAQ65615.1; hypothetical protein 43122..44675 Prevotella ruminicola 23 9000333 YP_003573443.1 CDS mutL NC_014033.1 44685 46523 D identified by match to protein family HMM PF01119; match to protein family HMM PF02518; match to protein family HMM PF08676; match to protein family HMM TIGR00585; DNA mismatch repair protein MutL 44685..46523 Prevotella ruminicola 23 9002208 YP_003573444.1 CDS PRU_0038 NC_014033.1 46761 48149 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 46761..48149 Prevotella ruminicola 23 9002775 YP_003573445.1 CDS aat NC_014033.1 48646 49296 R identified by similarity to SP:P23885; match to protein family HMM PF03588; match to protein family HMM TIGR00667; leucyltransferase complement(48646..49296) Prevotella ruminicola 23 9002005 YP_003573446.1 CDS clpA NC_014033.1 49274 51487 R identified by similarity to SP:P15716; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR02639; ATP-dependent Clp protease ATP-binding subunit ClpA complement(49274..51487) Prevotella ruminicola 23 9002582 YP_003573447.1 CDS clpS NC_014033.1 51490 51795 R identified by similarity to SP:P75832; match to protein family HMM PF02617; ATP-dependent Clp protease adaptor protein ClpS complement(51490..51795) Prevotella ruminicola 23 9001442 YP_003573448.1 CDS PRU_0043 NC_014033.1 52167 52517 D identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090; iojap-like protein 52167..52517 Prevotella ruminicola 23 9002784 YP_003573449.1 CDS PRU_0044 NC_014033.1 52587 54608 D identified by similarity to GB:AAK77908.1; match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM TIGR01241; ATP-dependent metalloprotease FtsH 52587..54608 Prevotella ruminicola 23 9001668 YP_003573450.1 CDS cdsA NC_014033.1 54601 55452 D identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase 54601..55452 Prevotella ruminicola 23 9002263 YP_003573451.1 CDS PRU_0046 NC_014033.1 55444 55914 R lipoprotein complement(55444..55914) Prevotella ruminicola 23 9000726 YP_003573452.1 CDS PRU_0047 NC_014033.1 55998 58052 D identified by match to protein family HMM PF00593; hypothetical protein 55998..58052 Prevotella ruminicola 23 9002001 YP_003573453.1 CDS PRU_0048 NC_014033.1 58151 58852 D identified by glimmer; hypothetical protein 58151..58852 Prevotella ruminicola 23 9002591 YP_003573454.1 CDS PRU_0049 NC_014033.1 58822 59322 R lipoprotein complement(58822..59322) Prevotella ruminicola 23 9000399 YP_003573455.1 CDS asd NC_014033.1 59312 60325 R identified by similarity to SP:Q04797; match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR01296; aspartate-semialdehyde dehydrogenase complement(59312..60325) Prevotella ruminicola 23 9001286 YP_003573456.1 CDS PRU_0051 NC_014033.1 60416 62548 D identified by similarity to SP:P26235; match to protein family HMM PF00999; monovalent cation:proton antiporter-2 family transporter 60416..62548 Prevotella ruminicola 23 9002691 YP_003573457.1 CDS PRU_0052 NC_014033.1 62572 63255 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 62572..63255 Prevotella ruminicola 23 9001913 YP_003573458.1 CDS PRU_0053 NC_014033.1 63252 64097 D identified by similarity to GB:AAO55113.1; hypothetical protein 63252..64097 Prevotella ruminicola 23 9000666 YP_003573459.1 CDS asnS NC_014033.1 64140 65579 R identified by similarity to SP:P17242; match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00457; asparagine--tRNA ligase complement(64140..65579) Prevotella ruminicola 23 9000073 YP_003573460.1 CDS rluB NC_014033.1 65607 66956 R identified by similarity to SP:P35159; match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; ribosomal large subunit pseudouridine synthase B complement(65607..66956) Prevotella ruminicola 23 9001879 YP_003573461.1 CDS purB NC_014033.1 67010 68356 R identified by similarity to SP:P25739; match to protein family HMM PF00206; match to protein family HMM PF08328; match to protein family HMM TIGR00928; adenylosuccinate lyase complement(67010..68356) Prevotella ruminicola 23 9001070 YP_003573462.1 CDS PRU_0058 NC_014033.1 68625 69050 R identified by match to protein family HMM PF01842; ACT domain-containing protein complement(68625..69050) Prevotella ruminicola 23 9002772 YP_003573463.1 CDS PRU_0059 NC_014033.1 69067 70365 R identified by similarity to SP:P76085; phenylacetate-CoA ligase complement(69067..70365) Prevotella ruminicola 23 9002229 YP_003573464.1 CDS PRU_0060 NC_014033.1 70530 71264 D identified by similarity to PIR:A69519; hypothetical protein 70530..71264 Prevotella ruminicola 23 9001715 YP_003573465.1 CDS PRU_0061 NC_014033.1 71268 71993 R identified by similarity to GB:AAO75876.1; match to protein family HMM PF09365; match to protein family HMM TIGR02453; hypothetical protein complement(71268..71993) Prevotella ruminicola 23 9001380 YP_003573466.1 CDS PRU_0062 NC_014033.1 72005 72499 R identified by similarity to PIR:E98036; hypothetical protein complement(72005..72499) Prevotella ruminicola 23 9002294 YP_003573467.1 CDS PRU_0063 NC_014033.1 72674 74575 R identified by glimmer; hypothetical protein complement(72674..74575) Prevotella ruminicola 23 9000509 YP_003573468.1 CDS dnaK NC_014033.1 75549 77465 R identified by similarity to GB:BAA35087.1; match to protein family HMM PF00012; match to protein family HMM TIGR02350; chaperone protein DnaK complement(75549..77465) Prevotella ruminicola 23 9001341 YP_003573469.1 CDS PRU_0065 NC_014033.1 77550 79046 D identified by similarity to GB:AAO79718.1; hypothetical protein 77550..79046 Prevotella ruminicola 23 9001771 YP_003573470.1 CDS recA NC_014033.1 79086 80108 R identified by similarity to SP:Q59717; match to protein family HMM PF00154; match to protein family HMM TIGR02012; RecA protein complement(79086..80108) Prevotella ruminicola 23 9002555 YP_003573471.1 CDS lys1 NC_014033.1 80149 81387 R identified by match to protein family HMM PF03435; saccharopine dehydrogenase complement(80149..81387) Prevotella ruminicola 23 9000902 YP_003573472.1 CDS PRU_0068 NC_014033.1 81444 82049 R identified by similarity to GB:AAO79703.1; hypothetical protein complement(81444..82049) Prevotella ruminicola 23 9002481 YP_003573473.1 CDS PRU_0069 NC_014033.1 82285 83586 D identified by similarity to GB:BAA25994.1; match to protein family HMM PF03600; NhaD sodium:hydrogen antiporter family sodium transporter 82285..83586 Prevotella ruminicola 23 9002337 YP_003573474.1 CDS PRU_0070 NC_014033.1 83622 86366 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory box histidine kinase complement(83622..86366) Prevotella ruminicola 23 9000185 YP_003573475.1 CDS PRU_0071 NC_014033.1 86376 89153 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229; overlaps another CDS with the same product name; sensory box histidine kinase complement(86376..89153) Prevotella ruminicola 23 9001528 YP_003573476.1 CDS PRU_0072 NC_014033.1 89150 91132 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229; overlaps another CDS with the same product name; sensory box histidine kinase complement(89150..91132) Prevotella ruminicola 23 9002119 YP_003573477.1 CDS PRU_0073 NC_014033.1 91134 93170 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM TIGR00229; sensory box histidine kinase complement(91134..93170) Prevotella ruminicola 23 9002076 YP_003573478.1 CDS frr NC_014033.1 93322 93882 D identified by match to protein family HMM PF01765; match to protein family HMM TIGR00496; ribosome recycling factor 93322..93882 Prevotella ruminicola 23 9000255 YP_003573479.1 CDS rsgA NC_014033.1 93883 94812 D identified by match to protein family HMM PF03193; match to protein family HMM TIGR00157; ribosome small subunit-dependent GTPase A 93883..94812 Prevotella ruminicola 23 9001182 YP_003573480.1 CDS PRU_0076 NC_014033.1 94847 97267 D identified by match to protein family HMM PF00326; S9 family peptidase 94847..97267 Prevotella ruminicola 23 9001796 YP_003573481.1 CDS trmU NC_014033.1 97307 98386 R identified by match to protein family HMM PF03054; match to protein family HMM TIGR00420; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase complement(97307..98386) Prevotella ruminicola 23 9001737 YP_003573482.1 CDS PRU_0078 NC_014033.1 98605 99519 D identified by match to protein family HMM PF01145; SPFH/Band 7 domain-containing protein 98605..99519 Prevotella ruminicola 23 9002720 YP_003573483.1 CDS PRU_0079 NC_014033.1 99547 99738 D identified by similarity to GB:AAO79300.1; hypothetical protein 99547..99738 Prevotella ruminicola 23 9000481 YP_003573484.1 CDS PRU_0080 NC_014033.1 99751 100950 D identified by similarity to GB:AAO78218.1; match to protein family HMM PF08840; hypothetical protein 99751..100950 Prevotella ruminicola 23 9001479 YP_003573485.1 CDS PRU_0081 NC_014033.1 100993 102912 R identified by similarity to SP:P96105; alpha-glucuronidase complement(100993..102912) Prevotella ruminicola 23 9002745 YP_003573486.1 CDS PRU_0082 NC_014033.1 103020 105383 D identified by similarity to SP:P48982; match to protein family HMM PF01301; match to protein family HMM PF02449; beta-galactosidase 103020..105383 Prevotella ruminicola 23 9001904 YP_003573487.1 CDS PRU_0083 NC_014033.1 105568 107937 D identified by similarity to SP:Q03961; match to protein family HMM PF02563; outer membrane auxiliary (OMA) protein family polysaccharide transporter 105568..107937 Prevotella ruminicola 23 9002074 YP_003573488.1 CDS PRU_0084 NC_014033.1 107944 109020 D identified by match to protein family HMM PF02706; chain length determinant family protein 107944..109020 Prevotella ruminicola 23 9001677 YP_003573489.1 CDS rfbC_1 NC_014033.1 109366 109920 D identified by similarity to SP:P37745; match to protein family HMM PF00908; match to protein family HMM TIGR01221; dTDP-4-dehydrorhamnose 3,5-epimerase 109366..109920 Prevotella ruminicola 23 9000336 YP_003573490.1 CDS PRU_0087 NC_014033.1 110969 112786 D identified by similarity to GB:AAC05838.1; match to protein family HMM PF00155; hemolysin erythrocyte lysis protein 2 110969..112786 Prevotella ruminicola 23 9001226 YP_003573491.1 CDS PRU_0088 NC_014033.1 112794 113816 D identified by similarity to SP:Q44297; match to protein family HMM PF01210; match to protein family HMM PF02317; octopine/opine/tauropine dehydrogenase-like protein 112794..113816 Prevotella ruminicola 23 9000020 YP_003573492.1 CDS PRU_0089 NC_014033.1 113813 114499 D identified by similarity to GB:BAB80328.1; hypothetical protein 113813..114499 Prevotella ruminicola 23 8999988 YP_003573493.1 CDS PRU_0090 NC_014033.1 114502 115944 D identified by similarity to SP:O32273; match to protein family HMM PF01943; polysaccharide biosynthesis family protein 114502..115944 Prevotella ruminicola 23 9000762 YP_003573494.1 CDS PRU_0091 NC_014033.1 115941 116894 D identified by match to protein family HMM PF01697; group 2 family glycosyltransferase 115941..116894 Prevotella ruminicola 23 9001600 YP_003573495.1 CDS PRU_0092 NC_014033.1 116881 117291 D identified by similarity to GB:AAS55720.1; match to protein family HMM PF05523; overlaps another CDS with the same product name; lipopolysaccharide biosynthesis protein 116881..117291 Prevotella ruminicola 23 9002367 YP_003573496.1 CDS PRU_0093 NC_014033.1 117257 117712 D identified by similarity to GB:AAS55720.1; match to protein family HMM PF05523; overlaps another CDS with the same product name; lipopolysaccharide biosynthesis protein 117257..117712 Prevotella ruminicola 23 9000365 YP_003573497.1 CDS PRU_0094 NC_014033.1 117705 118808 D identified by match to protein family HMM PF01041; DegT/DnrJ/EryC1/StrS family aminotransferase 117705..118808 Prevotella ruminicola 23 9002520 YP_003573498.1 CDS PRU_0095 NC_014033.1 118801 119745 D group 2 family glycosyltransferase 118801..119745 Prevotella ruminicola 23 9002679 YP_003573499.1 CDS PRU_0096 NC_014033.1 119848 120432 D identified by similarity to GB:CAA11147.1; match to protein family HMM PF00132; acetyl transferase 119848..120432 Prevotella ruminicola 23 9000316 YP_003573500.1 CDS PRU_0097 NC_014033.1 120437 121546 D hypothetical protein 120437..121546 Prevotella ruminicola 23 9002050 YP_003573501.1 CDS PRU_0098 NC_014033.1 121539 122534 D identified by match to protein family HMM PF00534; group 1 family glycosyltransferase 121539..122534 Prevotella ruminicola 23 9002359 YP_003573502.1 CDS PRU_0099 NC_014033.1 122589 123620 D identified by similarity to GB:AAK64372.1; O-antigen polymerase 122589..123620 Prevotella ruminicola 23 9000100 YP_003573503.1 CDS PRU_0100 NC_014033.1 123632 124735 D identified by similarity to GB:AAT28925.1; match to protein family HMM PF00534; hypothetical protein 123632..124735 Prevotella ruminicola 23 9001384 YP_003573504.1 CDS PRU_0101 NC_014033.1 124740 125786 D identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; match to protein family HMM PF08485; polysaccharide biosynthesis family protein 124740..125786 Prevotella ruminicola 23 9002528 YP_003573505.1 CDS PRU_0102 NC_014033.1 125798 126994 D identified by match to protein family HMM PF01370; match to protein family HMM PF07993; hypothetical protein 125798..126994 Prevotella ruminicola 23 9000533 YP_003573506.1 CDS PRU_0103 NC_014033.1 127006 128172 D identified by match to protein family HMM PF02350; match to protein family HMM TIGR00236; UDP-N-acetylglucosamine 2-epimerase 127006..128172 Prevotella ruminicola 23 9000383 YP_003573507.1 CDS PRU_0104 NC_014033.1 128157 129431 D identified by match to protein family HMM PF00534; group 1 family glycosyltransferase 128157..129431 Prevotella ruminicola 23 9001139 YP_003573508.1 CDS PRU_0106 NC_014033.1 129991 130164 R identified by glimmer; hypothetical protein complement(129991..130164) Prevotella ruminicola 23 9000226 YP_003573509.1 CDS PRU_0107 NC_014033.1 130518 131645 D identified by similarity to GB:BAD49541.1; hypothetical protein 130518..131645 Prevotella ruminicola 23 9001428 YP_003573510.1 CDS PRU_0108 NC_014033.1 131773 132798 D identified by match to protein family HMM PF01807; DNA-binding protein 131773..132798 Prevotella ruminicola 23 9002714 YP_003573511.1 CDS PRU_0109 NC_014033.1 133287 133868 D DNA-binding protein 133287..133868 Prevotella ruminicola 23 9000535 YP_003573512.1 CDS PRU_0110 NC_014033.1 134010 134192 D identified by glimmer; hypothetical protein 134010..134192 Prevotella ruminicola 23 9001634 YP_003573513.1 CDS PRU_0111 NC_014033.1 134208 134651 D identified by similarity to SP:P00806; match to protein family HMM PF01510; N-acetylmuramoyl-L-alanine amidase 134208..134651 Prevotella ruminicola 23 9002547 YP_003573514.1 CDS PRU_0112 NC_014033.1 134811 135926 D identified by similarity to SP:O34753; match to protein family HMM PF00953; overlaps another CDS with the same product name; glycosyl transferase family protein 134811..135926 Prevotella ruminicola 23 9001719 YP_003573515.1 CDS PRU_0113 NC_014033.1 135920 137080 D identified by similarity to SP:O34753; match to protein family HMM PF00953; overlaps another CDS with the same product name; glycosyl transferase family protein 135920..137080 Prevotella ruminicola 23 9002546 YP_003573516.1 CDS PRU_0114 NC_014033.1 137113 138966 R identified by similarity to GB:AAO77364.1; hypothetical protein complement(137113..138966) Prevotella ruminicola 23 9001761 YP_003573517.1 CDS PRU_0115 NC_014033.1 138959 140290 R identified by match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR03156; GTP-binding protein complement(138959..140290) Prevotella ruminicola 23 9000838 YP_003573518.1 CDS nagB NC_014033.1 140459 141253 D identified by similarity to SP:P09375; match to protein family HMM PF01182; match to protein family HMM TIGR00502; glucosamine-6-phosphate deaminase 140459..141253 Prevotella ruminicola 23 9000092 YP_003573519.1 CDS PRU_0117 NC_014033.1 141303 143222 D identified by similarity to GB:AAC44671.1; alpha-glucosidase family protein 141303..143222 Prevotella ruminicola 23 9002078 YP_003573520.1 CDS PRU_0118 NC_014033.1 143270 146236 D identified by match to protein family HMM PF00675; match to protein family HMM PF05193; M16 family peptidase 143270..146236 Prevotella ruminicola 23 9001364 YP_003573521.1 CDS PRU_0119 NC_014033.1 146281 147930 D identified by similarity to SP:P00923; similarity to SP:P14407; match to protein family HMM PF05681; match to protein family HMM PF05683; match to protein family HMM TIGR00722; match to protein family HMM TIGR00723; fumarate hydratase 146281..147930 Prevotella ruminicola 23 9000625 YP_003573522.1 CDS PRU_0120 NC_014033.1 147954 149411 D identified by match to protein family HMM TIGR03296; peptidase 147954..149411 Prevotella ruminicola 23 9002115 YP_003573523.1 CDS clpB NC_014033.1 149429 151939 R identified by similarity to SP:P53533; match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03346; ATP-dependent chaperone protein ClpB complement(149429..151939) Prevotella ruminicola 23 9002196 YP_003573524.1 CDS PRU_0122 NC_014033.1 152196 154616 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB dependent receptor 152196..154616 Prevotella ruminicola 23 9001454 YP_003573525.1 CDS typA NC_014033.1 154740 156542 R identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394; GTP-binding protein TypA complement(154740..156542) Prevotella ruminicola 23 9001744 YP_003573526.1 CDS rpsO NC_014033.1 156821 157090 D identified by match to protein family HMM PF00312; match to protein family HMM TIGR00952; 30S ribosomal protein S15 156821..157090 Prevotella ruminicola 23 9000254 YP_003573527.1 CDS luxS NC_014033.1 157167 157661 R identified by match to protein family HMM PF02664; autoinducer-2 production protein LuxS complement(157167..157661) Prevotella ruminicola 23 9000491 YP_003573528.1 CDS PRU_0126 NC_014033.1 157704 158333 R identified by match to protein family HMM PF01048; match to protein family HMM TIGR01704; MTA/SAH nucleosidase complement(157704..158333) Prevotella ruminicola 23 9002545 YP_003573529.1 CDS PRU_0127 NC_014033.1 158500 159243 R identified by match to protein family HMM PF00588; TrmH family RNA methyltransferase complement(158500..159243) Prevotella ruminicola 23 9001398 YP_003573530.1 CDS PRU_0128 NC_014033.1 159338 161827 D identified by similarity to GB:BAD51206.1; hypothetical protein 159338..161827 Prevotella ruminicola 23 9001047 YP_003573531.1 CDS PRU_0129 NC_014033.1 161873 164584 D identified by match to protein family HMM PF00288; match to protein family HMM PF07959; match to protein family HMM PF08544; kinase 161873..164584 Prevotella ruminicola 23 9000199 YP_003573532.1 CDS PRU_0130 NC_014033.1 164670 165563 D identified by similarity to GB:BAD47644.1; match to protein family HMM PF08885; hypothetical protein 164670..165563 Prevotella ruminicola 23 9002599 YP_003573533.1 CDS PRU_0131 NC_014033.1 165638 168016 D identified by match to protein family HMM PF00842; match to protein family HMM PF01168; match to protein family HMM PF08245; match to protein family HMM TIGR00492; alanine racemase/UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 165638..168016 Prevotella ruminicola 23 9001639 YP_003573534.1 CDS PRU_0132 NC_014033.1 168068 168589 R identified by glimmer; hypothetical protein complement(168068..168589) Prevotella ruminicola 23 9000659 YP_003573535.1 CDS PRU_0136 NC_014033.1 170194 170454 D identified by similarity to SP:Q46267; lyase domain-containing protein 170194..170454 Prevotella ruminicola 23 9001117 YP_003573536.1 CDS PRU_0137 NC_014033.1 170686 171450 D identified by glimmer; hypothetical protein 170686..171450 Prevotella ruminicola 23 9002598 YP_003573537.1 CDS ftsZ_1 NC_014033.1 171568 172836 D identified by match to protein family HMM PF00091; match to protein family HMM PF03953; match to protein family HMM TIGR00065; cell division protein FtsZ 171568..172836 Prevotella ruminicola 23 9002236 YP_003573538.1 CDS PRU_0139 NC_014033.1 172833 173414 D identified by glimmer; hypothetical protein 172833..173414 Prevotella ruminicola 23 9002682 YP_003573539.1 CDS PRU_0140 NC_014033.1 173418 174365 D lipoprotein 173418..174365 Prevotella ruminicola 23 9001493 YP_003573540.1 CDS PRU_0141 NC_014033.1 174777 176120 D identified by match to protein family HMM PF02698; hypothetical protein 174777..176120 Prevotella ruminicola 23 9001150 YP_003573541.1 CDS PRU_0142 NC_014033.1 176487 176588 R lipoprotein complement(176487..176588) Prevotella ruminicola 23 9000995 YP_003573542.1 CDS PRU_0143 NC_014033.1 176655 177209 R identified by similarity to GB:AAO76812.1; hypothetical protein complement(176655..177209) Prevotella ruminicola 23 9000214 YP_003573543.1 CDS PRU_0144 NC_014033.1 177832 179394 D identified by match to protein family HMM PF04326; divergent AAA domain-containing protein 177832..179394 Prevotella ruminicola 23 9001894 YP_003573544.1 CDS PRU_0145 NC_014033.1 179604 180494 D identified by glimmer; hypothetical protein 179604..180494 Prevotella ruminicola 23 9001486 YP_003573545.1 CDS PRU_0146 NC_014033.1 180690 181358 D identified by glimmer; hypothetical protein 180690..181358 Prevotella ruminicola 23 9002595 YP_003573546.1 CDS PRU_0148 NC_014033.1 181863 182120 D identified by glimmer; hypothetical protein 181863..182120 Prevotella ruminicola 23 9001735 YP_003573547.1 CDS PRU_0149 NC_014033.1 182172 182492 D identified by glimmer; hypothetical protein 182172..182492 Prevotella ruminicola 23 9001825 YP_003573548.1 CDS PRU_0150 NC_014033.1 182510 182953 D identified by glimmer; hypothetical protein 182510..182953 Prevotella ruminicola 23 9000967 YP_003573549.1 CDS PRU_0151 NC_014033.1 182967 185444 D identified by glimmer; hypothetical protein 182967..185444 Prevotella ruminicola 23 9000017 YP_003573550.1 CDS PRU_0152 NC_014033.1 185510 185962 D identified by similarity to GB:AAN67722.1; match to protein family HMM PF08291; hypothetical protein 185510..185962 Prevotella ruminicola 23 9000620 YP_003573551.1 CDS PRU_0153 NC_014033.1 186024 188465 R identified by similarity to GB:AAB95491.2; match to protein family HMM PF06165; match to protein family HMM PF06204; match to protein family HMM PF06205; cellobiose phosphorylase complement(186024..188465) Prevotella ruminicola 23 9002713 YP_003573552.1 CDS PRU_0154 NC_014033.1 188752 192024 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB dependent receptor 188752..192024 Prevotella ruminicola 23 9001768 YP_003573553.1 CDS PRU_0155 NC_014033.1 192060 193604 D lipoprotein 192060..193604 Prevotella ruminicola 23 9000410 YP_003573554.1 CDS PRU_0156 NC_014033.1 193561 194748 R identified by similarity to PIR:S76678; match to protein family HMM PF01266; match to protein family HMM PF03486; match to protein family HMM TIGR00275; hypothetical protein complement(193561..194748) Prevotella ruminicola 23 9002238 YP_003573555.1 CDS PRU_0157 NC_014033.1 194777 196837 R identified by match to protein family HMM PF02629; CoA-binding domain-containing protein complement(194777..196837) Prevotella ruminicola 23 9001703 YP_003573556.1 CDS PRU_0158 NC_014033.1 196823 202252 D identified by similarity to GB:AAO79152.1; hypothetical protein 196823..202252 Prevotella ruminicola 23 9001191 YP_003573557.1 CDS PRU_0159 NC_014033.1 202267 203337 D identified by similarity to GB:BAD47539.1; hypothetical protein 202267..203337 Prevotella ruminicola 23 9001780 YP_003573558.1 CDS PRU_0160 NC_014033.1 203371 204471 D identified by similarity to SP:P27254; match to protein family HMM PF03308; match to protein family HMM TIGR00750; LAO/AO transport system ATPase 203371..204471 Prevotella ruminicola 23 9002754 YP_003573559.1 CDS ispH NC_014033.1 204513 205388 D identified by match to protein family HMM PF02401; match to protein family HMM TIGR00216; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 204513..205388 Prevotella ruminicola 23 9002701 YP_003573560.1 CDS PRU_0162 NC_014033.1 205385 206053 D identified by similarity to GB:AAO79495.1; hypothetical protein 205385..206053 Prevotella ruminicola 23 9000471 YP_003573561.1 CDS PRU_0163 NC_014033.1 206802 207539 D identified by match to protein family HMM PF02390; tRNA (guanine-N(7)-)-methyltransferase 206802..207539 Prevotella ruminicola 23 9000778 YP_003573562.1 CDS PRU_0164 NC_014033.1 207539 208666 D Mrp/Nbp35 family ATP-binding protein 207539..208666 Prevotella ruminicola 23 9001656 YP_003573563.1 CDS PRU_0165 NC_014033.1 208704 209246 R identified by similarity to GB:CAG41408.1; match to protein family HMM PF05656; hypothetical protein complement(208704..209246) Prevotella ruminicola 23 9001599 YP_003573564.1 CDS ilvE NC_014033.1 209255 210271 R identified by similarity to GB:AAF64593.1; match to protein family HMM PF01063; match to protein family HMM TIGR01123; branched-chain-amino-acid transaminase complement(209255..210271) Prevotella ruminicola 23 9000444 YP_003573565.1 CDS xseB NC_014033.1 210361 210549 R exodeoxyribonuclease VII small subunit complement(210361..210549) Prevotella ruminicola 23 9001078 YP_003573566.1 CDS xseA NC_014033.1 210556 211791 R identified by match to protein family HMM PF02601; exodeoxyribonuclease VII large subunit complement(210556..211791) Prevotella ruminicola 23 9002605 YP_003573567.1 CDS PRU_0169 NC_014033.1 211810 213129 R identified by match to protein family HMM PF00082; S8A family peptidase complement(211810..213129) Prevotella ruminicola 23 9000164 YP_003573568.1 CDS PRU_0170 NC_014033.1 213359 214720 D identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 213359..214720 Prevotella ruminicola 23 9000950 YP_003573569.1 CDS PRU_0171 NC_014033.1 214727 215344 D identified by similarity to GB:AAO77200.1; hypothetical protein 214727..215344 Prevotella ruminicola 23 9000774 YP_003573570.1 CDS PRU_0172 NC_014033.1 215341 215832 D identified by match to protein family HMM PF00149; match to protein family HMM TIGR00040; phosphodiesterase 215341..215832 Prevotella ruminicola 23 9001571 YP_003573571.1 CDS rfbB NC_014033.1 215847 216983 D identified by similarity to SP:P37777; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01181; dTDP-glucose 4,6-dehydratase 215847..216983 Prevotella ruminicola 23 9000516 YP_003573572.1 CDS PRU_0174 NC_014033.1 216970 217275 D identified by glimmer; hypothetical protein 216970..217275 Prevotella ruminicola 23 8999989 YP_003573573.1 CDS purT NC_014033.1 217272 218477 D identified by similarity to SP:P39771; match to protein family HMM PF01071; match to protein family HMM PF02222; phosphoribosylglycinamide formyltransferase 2 217272..218477 Prevotella ruminicola 23 9001144 YP_003573574.1 CDS PRU_0176 NC_014033.1 218495 218908 D identified by similarity to GB:AAK53472.1; similarity to GB:AAS55720.1; match to protein family HMM PF05523; polysaccharide glycan isomerase 218495..218908 Prevotella ruminicola 23 9001914 YP_003573575.1 CDS PRU_0177 NC_014033.1 218896 219831 D identified by similarity to GB:AAM36557.1; hypothetical protein 218896..219831 Prevotella ruminicola 23 9002348 YP_003573576.1 CDS PRU_0178 NC_014033.1 219893 220486 R identified by similarity to GB:AAO79562.1; match to protein family HMM PF02589; hypothetical protein complement(219893..220486) Prevotella ruminicola 23 9000730 YP_003573577.1 CDS PRU_0179 NC_014033.1 220517 221887 R identified by match to protein family HMM PF00037; match to protein family HMM PF02589; iron-sulfur cluster-binding protein complement(220517..221887) Prevotella ruminicola 23 9001162 YP_003573578.1 CDS PRU_0180 NC_014033.1 221921 222658 R identified by match to protein family HMM PF02754; cysteine-rich domain-containing protein complement(221921..222658) Prevotella ruminicola 23 9002342 YP_003573579.1 CDS PRU_0181 NC_014033.1 222844 223563 D identified by match to protein family HMM PF01027; hypothetical protein 222844..223563 Prevotella ruminicola 23 9002662 YP_003573580.1 CDS PRU_0187 NC_014033.1 229091 229903 D lipase 229091..229903 Prevotella ruminicola 23 9002759 YP_003573581.1 CDS PRU_0188 NC_014033.1 230098 230724 R identified by match to protein family HMM PF04326; divergent AAA domain-containing protein complement(230098..230724) Prevotella ruminicola 23 9002378 YP_003573582.1 CDS PRU_0190 NC_014033.1 231127 231669 D identified by similarity to GB:AAQ65527.1; hypothetical protein 231127..231669 Prevotella ruminicola 23 9002785 YP_003573583.1 CDS PRU_0191 NC_014033.1 231674 232630 D identified by match to protein family HMM PF00535; group 2 family glycosyltransferase 231674..232630 Prevotella ruminicola 23 9000394 YP_003573584.1 CDS PRU_0192 NC_014033.1 232630 233139 D identified by similarity to GB:BAD47935.1; lipoprotein 232630..233139 Prevotella ruminicola 23 9000951 YP_003573585.1 CDS PRU_0193 NC_014033.1 233261 233779 D identified by similarity to GB:AAO79667.1; hypothetical protein 233261..233779 Prevotella ruminicola 23 9000153 YP_003573586.1 CDS PRU_0194 NC_014033.1 233787 234812 D identified by similarity to SP:P41780; match to protein family HMM PF02424; thiamine biosynthesis lipoprotein ApbE 233787..234812 Prevotella ruminicola 23 9002148 YP_003573587.1 CDS PRU_0195 NC_014033.1 234819 235496 D identified by match to protein family HMM PF00027; cyclic nucleotide-binding domain-containing protein 234819..235496 Prevotella ruminicola 23 9001496 YP_003573588.1 CDS PRU_0196 NC_014033.1 235629 237743 D identified by similarity to SP:P27298; match to protein family HMM PF01432; oligopeptidase A 235629..237743 Prevotella ruminicola 23 9001926 YP_003573589.1 CDS PRU_0197 NC_014033.1 237715 238152 D identified by match to protein family HMM PF00383; cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein 237715..238152 Prevotella ruminicola 23 9000342 YP_003573590.1 CDS PRU_0198 NC_014033.1 238183 239856 D identified by similarity to SP:Q44879; match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; S41 family peptidase 238183..239856 Prevotella ruminicola 23 9002515 YP_003573591.1 CDS PRU_0199 NC_014033.1 239849 240394 D identified by match to protein family HMM PF01812; match to protein family HMM TIGR02727; 5-formyltetrahydrofolate cyclo-ligase family protein 239849..240394 Prevotella ruminicola 23 9001545 YP_003573592.1 CDS PRU_0200 NC_014033.1 240387 240677 R identified by similarity to GB:AAO79361.1; hypothetical protein complement(240387..240677) Prevotella ruminicola 23 9000772 YP_003573593.1 CDS recF NC_014033.1 240670 241770 R identified by match to protein family HMM PF02463; match to protein family HMM TIGR00611; DNA replication and repair protein RecF complement(240670..241770) Prevotella ruminicola 23 9000984 YP_003573594.1 CDS PRU_0202 NC_014033.1 241855 242595 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 241855..242595 Prevotella ruminicola 23 9001366 YP_003573595.1 CDS ribH NC_014033.1 242601 243071 D identified by match to protein family HMM PF00885; match to protein family HMM TIGR00114; 6,7-dimethyl-8-ribityllumazine synthase 242601..243071 Prevotella ruminicola 23 9001989 YP_003573596.1 CDS PRU_0204 NC_014033.1 243195 244592 D identified by match to protein family HMM PF02518; sensor histidine kinase 243195..244592 Prevotella ruminicola 23 9002594 YP_003573597.1 CDS PRU_0205 NC_014033.1 244610 245572 R identified by match to protein family HMM PF00196; match to protein family HMM PF01814; LuxR family transcriptional regulator complement(244610..245572) Prevotella ruminicola 23 9001223 YP_003573598.1 CDS PRU_0206 NC_014033.1 245667 246866 D identified by match to protein family HMM PF01042; endoribonuclease L-PSP family protein 245667..246866 Prevotella ruminicola 23 9001840 YP_003573599.1 CDS PRU_0207 NC_014033.1 246879 248750 D hypothetical protein 246879..248750 Prevotella ruminicola 23 9002448 YP_003573600.1 CDS PRU_0208 NC_014033.1 248989 250113 D identified by match to protein family HMM PF00691; OmpA family protein 248989..250113 Prevotella ruminicola 23 9001576 YP_003573601.1 CDS PRU_0209 NC_014033.1 250143 251726 D identified by glimmer; hypothetical protein 250143..251726 Prevotella ruminicola 23 9002184 YP_003573602.1 CDS PRU_0210 NC_014033.1 251728 252426 D identified by glimmer; hypothetical protein 251728..252426 Prevotella ruminicola 23 9001036 YP_003573603.1 CDS PRU_0211 NC_014033.1 252551 252652 R lipoprotein complement(252551..252652) Prevotella ruminicola 23 9001842 YP_003573604.1 CDS PRU_0212 NC_014033.1 252720 253256 R identified by match to protein family HMM TIGR01201; histone-like DNA-binding protein complement(252720..253256) Prevotella ruminicola 23 9002473 YP_003573605.1 CDS PRU_0213 NC_014033.1 253725 254921 R identified by similarity to GB:AAO77512.1; hypothetical protein complement(253725..254921) Prevotella ruminicola 23 9001003 YP_003573606.1 CDS PRU_0214 NC_014033.1 255233 256309 D identified by glimmer; hypothetical protein 255233..256309 Prevotella ruminicola 23 9002172 YP_003573607.1 CDS PRU_0215 NC_014033.1 256290 257135 D identified by glimmer; hypothetical protein 256290..257135 Prevotella ruminicola 23 9000008 YP_003573608.1 CDS PRU_0216 NC_014033.1 257294 257824 D identified by glimmer; hypothetical protein 257294..257824 Prevotella ruminicola 23 9001241 YP_003573609.1 CDS PRU_0217 NC_014033.1 257947 258336 D identified by glimmer; hypothetical protein 257947..258336 Prevotella ruminicola 23 9001849 YP_003573610.1 CDS PRU_0218 NC_014033.1 258637 258912 D identified by glimmer; hypothetical protein 258637..258912 Prevotella ruminicola 23 9001814 YP_003573611.1 CDS PRU_0219 NC_014033.1 259015 259335 D identified by glimmer; hypothetical protein 259015..259335 Prevotella ruminicola 23 9002440 YP_003573612.1 CDS PRU_0220 NC_014033.1 259373 261811 D identified by glimmer; hypothetical protein 259373..261811 Prevotella ruminicola 23 9000084 YP_003573613.1 CDS PRU_0221 NC_014033.1 261897 262319 D identified by similarity to GB:BAD49097.1; match to protein family HMM PF08291; hypothetical protein 261897..262319 Prevotella ruminicola 23 9002059 YP_003573614.1 CDS PRU_0222 NC_014033.1 262338 263636 R identified by match to protein family HMM PF00328; histidine acid phosphatase family protein complement(262338..263636) Prevotella ruminicola 23 9001681 YP_003573615.1 CDS PRU_0223 NC_014033.1 263643 264890 R identified by similarity to GB:AAO79849.1; match to protein family HMM PF00328; hypothetical protein complement(263643..264890) Prevotella ruminicola 23 9000911 YP_003573616.1 CDS PRU_0224 NC_014033.1 265073 265795 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01549; match to protein family HMM TIGR02254; HAD-superfamily hydrolase 265073..265795 Prevotella ruminicola 23 9000734 YP_003573617.1 CDS PRU_0225 NC_014033.1 265799 267340 R identified by match to protein family HMM PF00013; match to protein family HMM PF01966; match to protein family HMM PF08668; match to protein family HMM TIGR00277; match to protein family HMM TIGR03319; KH/HDIG domain-containing protein complement(265799..267340) Prevotella ruminicola 23 9001413 YP_003573618.1 CDS PRU_0226 NC_014033.1 267369 267668 R identified by similarity to GB:AAO79523.1; hypothetical protein complement(267369..267668) Prevotella ruminicola 23 9002468 YP_003573619.1 CDS PRU_0227 NC_014033.1 267685 267981 R identified by similarity to GB:AAO79524.1; hypothetical protein complement(267685..267981) Prevotella ruminicola 23 9000303 YP_003573620.1 CDS PRU_0228 NC_014033.1 268067 268687 R identified by similarity to GB:AAO79580.1; hypothetical protein complement(268067..268687) Prevotella ruminicola 23 9000436 YP_003573621.1 CDS rfbA NC_014033.1 268852 269724 D identified by similarity to SP:P55254; match to protein family HMM PF00483; match to protein family HMM TIGR01207; glucose-1-phosphate thymidylyltransferase 268852..269724 Prevotella ruminicola 23 9001050 YP_003573622.1 CDS PRU_0230 NC_014033.1 269766 271700 R identified by match to protein family HMM PF00288; match to protein family HMM PF00483; nucleotidyl transferase family protein complement(269766..271700) Prevotella ruminicola 23 9002114 YP_003573623.1 CDS PRU_0231 NC_014033.1 271904 272482 D identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; ECF family RNA polymerase sigma-70 factor 271904..272482 Prevotella ruminicola 23 9001509 YP_003573624.1 CDS rpe NC_014033.1 272474 273121 R identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; ribulose-phosphate 3-epimerase complement(272474..273121) Prevotella ruminicola 23 9001952 YP_003573625.1 CDS fmt NC_014033.1 273317 274291 R identified by match to protein family HMM PF00551; match to protein family HMM PF02911; match to protein family HMM TIGR00460; methionyl-tRNA formyltransferase complement(273317..274291) Prevotella ruminicola 23 9001334 YP_003573626.1 CDS PRU_0235 NC_014033.1 274397 276202 R identified by match to protein family HMM PF00571; match to protein family HMM PF00654; voltage-gated chloride channel family protein complement(274397..276202) Prevotella ruminicola 23 9002499 YP_003573627.1 CDS PRU_0236 NC_014033.1 276313 276897 R identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057; Sua5/YciO/YrdC/YwlC family protein complement(276313..276897) Prevotella ruminicola 23 9000921 YP_003573628.1 CDS prfC NC_014033.1 277010 278599 R identified by similarity to SP:P33998; match to protein family HMM PF00009; match to protein family HMM TIGR00231; match to protein family HMM TIGR00503; peptide chain release factor 3 complement(277010..278599) Prevotella ruminicola 23 9001414 YP_003573629.1 CDS rfbD NC_014033.1 279072 279929 R identified by match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM TIGR01214; dTDP-4-dehydrorhamnose reductase complement(279072..279929) Prevotella ruminicola 23 9000949 YP_003573630.1 CDS PRU_0239 NC_014033.1 280048 280593 R identified by similarity to GB:CAD55725.1; hypothetical protein complement(280048..280593) Prevotella ruminicola 23 9000689 YP_003573631.1 CDS PRU_0240 NC_014033.1 280602 281267 R identified by match to protein family HMM PF01810; LysE family translocator protein complement(280602..281267) Prevotella ruminicola 23 9001899 YP_003573632.1 CDS glkA NC_014033.1 281440 282423 D identified by similarity to SP:P40184; match to protein family HMM PF00480; glucokinase 281440..282423 Prevotella ruminicola 23 9002510 YP_003573633.1 CDS PRU_0242 NC_014033.1 282598 284139 D identified by similarity to GB:AAO76741.1; match to protein family HMM PF01636; hypothetical protein 282598..284139 Prevotella ruminicola 23 9000456 YP_003573634.1 CDS PRU_0243 NC_014033.1 284318 284734 R identified by similarity to GB:AAO79700.1; hypothetical protein complement(284318..284734) Prevotella ruminicola 23 9000682 YP_003573635.1 CDS coaE NC_014033.1 284716 285282 R identified by match to protein family HMM PF01121; match to protein family HMM TIGR00152; dephospho-CoA kinase complement(284716..285282) Prevotella ruminicola 23 9001688 YP_003573636.1 CDS PRU_0245 NC_014033.1 285279 286268 R identified by similarity to GB:AAO79698.1; hypothetical protein complement(285279..286268) Prevotella ruminicola 23 9002024 YP_003573637.1 CDS yajC NC_014033.1 286269 286589 R identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739; preprotein translocase subunit YajC complement(286269..286589) Prevotella ruminicola 23 9000069 YP_003573638.1 CDS nusB NC_014033.1 286582 287430 R identified by match to protein family HMM PF01029; match to protein family HMM TIGR01951; transcription antitermination factor NusB complement(286582..287430) Prevotella ruminicola 23 9000448 YP_003573639.1 CDS rplY NC_014033.1 287820 288416 D identified by similarity to SP:P14194; match to protein family HMM PF01386; match to protein family HMM TIGR00731; ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 287820..288416 Prevotella ruminicola 23 9001944 YP_003573640.1 CDS pth NC_014033.1 288437 289009 D identified by match to protein family HMM PF01195; match to protein family HMM TIGR00447; aminoacyl-tRNA hydrolase 288437..289009 Prevotella ruminicola 23 9002731 YP_003573641.1 CDS PRU_0250 NC_014033.1 289013 289393 D identified by similarity to SP:P45802; match to protein family HMM PF01479; heat shock protein 15 289013..289393 Prevotella ruminicola 23 9000446 YP_003573642.1 CDS PRU_0251 NC_014033.1 289408 290400 D identified by match to protein family HMM PF01699; match to protein family HMM TIGR00367; K+-dependent Na+/Ca+ exchanger-like protein 289408..290400 Prevotella ruminicola 23 9000213 YP_003573643.1 CDS PRU_0252 NC_014033.1 290447 291142 D identified by similarity to GB:AAO76674.1; match to protein family HMM PF02592; match to protein family HMM TIGR00697; hypothetical protein 290447..291142 Prevotella ruminicola 23 9000942 YP_003573644.1 CDS PRU_0253 NC_014033.1 291221 291682 D identified by match to protein family HMM PF01227; match to protein family HMM TIGR03139; GTP cyclohydrolase family protein 291221..291682 Prevotella ruminicola 23 9001410 YP_003573645.1 CDS PRU_0254 NC_014033.1 292383 294164 D identified by similarity to SP:Q58628; match to protein family HMM PF00682; pyruvate carboxylase 292383..294164 Prevotella ruminicola 23 9002204 YP_003573646.1 CDS PRU_0255 NC_014033.1 294282 294863 D identified by match to protein family HMM TIGR00277; HDIG domain-containing protein 294282..294863 Prevotella ruminicola 23 9000486 YP_003573647.1 CDS PRU_0256 NC_014033.1 294934 297798 D identified by similarity to GB:AAO77240.1; hypothetical protein 294934..297798 Prevotella ruminicola 23 9001296 YP_003573648.1 CDS PRU_0257 NC_014033.1 297811 300075 D identified by match to protein family HMM PF00999; match to protein family HMM PF02080; monovalent cation:proton antiporter-2 family transporter 297811..300075 Prevotella ruminicola 23 9000051 YP_003573649.1 CDS pepT NC_014033.1 300121 301344 R identified by similarity to SP:P55179; match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01882; tripeptide aminopeptidase complement(300121..301344) Prevotella ruminicola 23 9000484 YP_003573650.1 CDS PRU_0259 NC_014033.1 301427 302455 R acyltransferase family protein complement(301427..302455) Prevotella ruminicola 23 9002622 YP_003573651.1 CDS cadA NC_014033.1 302908 304869 D identified by similarity to SP:Q59465; match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01512; match to protein family HMM TIGR01525; cadmium-exporting ATPase 302908..304869 Prevotella ruminicola 23 9001723 YP_003573652.1 CDS PRU_0261 NC_014033.1 304866 305768 R hypothetical protein complement(304866..305768) Prevotella ruminicola 23 9000161 YP_003573653.1 CDS PRU_0262 NC_014033.1 305770 306525 R identified by similarity to GB:AAO78603.1; match to protein family HMM PF09359; hypothetical protein complement(305770..306525) Prevotella ruminicola 23 9002302 YP_003573654.1 CDS PRU_0263 NC_014033.1 306614 307585 R identified by match to protein family HMM PF01408; match to protein family HMM PF02894; oxidoreductase complement(306614..307585) Prevotella ruminicola 23 9001513 YP_003573655.1 CDS PRU_0264 NC_014033.1 307613 308512 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(307613..308512) Prevotella ruminicola 23 9001937 YP_003573656.1 CDS PRU_0265 NC_014033.1 308672 309691 D identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; RND family efflux transporter MFP subunit 308672..309691 Prevotella ruminicola 23 9001320 YP_003573657.1 CDS PRU_0266 NC_014033.1 309758 312868 D identified by match to protein family HMM PF00873; hydrophobe/amphiphile efflux-1 (HAE1) family RND efflux transporter 309758..312868 Prevotella ruminicola 23 9002314 YP_003573658.1 CDS PRU_0267 NC_014033.1 312941 314326 D identified by match to protein family HMM PF02321; outer membrane efflux protein 312941..314326 Prevotella ruminicola 23 8999980 YP_003573659.1 CDS PRU_0268 NC_014033.1 314379 316814 R identified by similarity to GB:AAO78779.1; match to protein family HMM PF00754; match to protein family HMM PF07944; hypothetical protein complement(314379..316814) Prevotella ruminicola 23 9000737 YP_003573660.1 CDS PRU_0269 NC_014033.1 316828 319140 R identified by match to protein family HMM PF00754; match to protein family HMM PF04616; family 43 glycosyl hydrolase/DS domain-containing protein complement(316828..319140) Prevotella ruminicola 23 9001595 YP_003573661.1 CDS PRU_0270 NC_014033.1 319150 321081 R identified by similarity to GB:AAC44671.1; alpha-glucosidase family protein complement(319150..321081) Prevotella ruminicola 23 9002388 YP_003573662.1 CDS PRU_0271 NC_014033.1 321389 323713 D identified by similarity to GB:BAB49423.1; match to protein family HMM PF07944; hypothetical protein 321389..323713 Prevotella ruminicola 23 9002454 YP_003573663.1 CDS PRU_0272 NC_014033.1 323786 326809 D identified by similarity to GB:CAA10226.1; match to protein family HMM PF00593; match to protein family HMM PF07715; receptor antigen RagA 323786..326809 Prevotella ruminicola 23 9000449 YP_003573664.1 CDS PRU_0273 NC_014033.1 326825 328552 D identified by match to protein family HMM PF07980; lipoprotein 326825..328552 Prevotella ruminicola 23 9002045 YP_003573665.1 CDS PRU_0274 NC_014033.1 328587 330110 D lipoprotein 328587..330110 Prevotella ruminicola 23 9002658 YP_003573666.1 CDS PRU_0275 NC_014033.1 330117 332351 D identified by similarity to GB:AAM43445.1; hypothetical protein 330117..332351 Prevotella ruminicola 23 9000981 YP_003573667.1 CDS PRU_0276 NC_014033.1 332409 333731 D identified by similarity to GB:CAD47266.1; match to protein family HMM PF08757; hypothetical protein 332409..333731 Prevotella ruminicola 23 9001484 YP_003573668.1 CDS PRU_0277 NC_014033.1 333733 334983 D identified by glimmer; hypothetical protein 333733..334983 Prevotella ruminicola 23 9001610 YP_003573669.1 CDS PRU_0278 NC_014033.1 334980 338924 D identified by match to protein family HMM PF00072; match to protein family HMM PF00165; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF07494; match to protein family HMM PF07495; sensor histidine kinase/DNA-binding response regulator 334980..338924 Prevotella ruminicola 23 9002347 YP_003573670.1 CDS PRU_0279 NC_014033.1 338925 339707 R identified by match to protein family HMM PF02535; ZIP zinc transporter family protein complement(338925..339707) Prevotella ruminicola 23 9001149 YP_003573671.1 CDS PRU_0280 NC_014033.1 339794 341056 R identified by similarity to GB:AAN58464.1; hypothetical protein complement(339794..341056) Prevotella ruminicola 23 9001538 YP_003573672.1 CDS PRU_0281 NC_014033.1 342117 344258 D identified by match to protein family HMM PF07228; sporulation family protein 342117..344258 Prevotella ruminicola 23 9000419 YP_003573673.1 CDS PRU_0282 NC_014033.1 344426 344821 R identified by glimmer; hypothetical protein complement(344426..344821) Prevotella ruminicola 23 9000784 YP_003573674.1 CDS PRU_0283 NC_014033.1 344913 345701 D identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 344913..345701 Prevotella ruminicola 23 9002606 YP_003573675.1 CDS pheC NC_014033.1 345819 346643 D identified by similarity to SP:Q01269; match to protein family HMM PF00497; cyclohexadienyl dehydratase 345819..346643 Prevotella ruminicola 23 9001998 YP_003573676.1 CDS PRU_0285 NC_014033.1 346656 347267 R identified by match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; UbiE/COQ5 family methyltransferase complement(346656..347267) Prevotella ruminicola 23 9001091 YP_003573677.1 CDS PRU_0286 NC_014033.1 347403 347879 R identified by glimmer; hypothetical protein complement(347403..347879) Prevotella ruminicola 23 9001131 YP_003573678.1 CDS PRU_0287 NC_014033.1 347925 349211 R identified by similarity to SP:Q9ULA0; match to protein family HMM PF02127; M18 family peptidase complement(347925..349211) Prevotella ruminicola 23 9000182 YP_003573679.1 CDS PRU_0288 NC_014033.1 349300 350310 R identified by glimmer; hypothetical protein complement(349300..350310) Prevotella ruminicola 23 9001704 YP_003573680.1 CDS PRU_0291 NC_014033.1 351454 353580 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(351454..353580) Prevotella ruminicola 23 9002778 YP_003573681.1 CDS PRU_0293 NC_014033.1 353832 356405 D identified by match to protein family HMM PF00488; match to protein family HMM PF01713; MutS2 family protein 353832..356405 Prevotella ruminicola 23 9002798 YP_003573682.1 CDS PRU_0294 NC_014033.1 356669 357079 D identified by similarity to GB:BAC95650.1; hypothetical protein 356669..357079 Prevotella ruminicola 23 9000273 YP_003573683.1 CDS PRU_0296 NC_014033.1 357507 358100 D identified by match to protein family HMM PF00440; TetR family transcriptional regulator 357507..358100 Prevotella ruminicola 23 9002822 YP_003573684.1 CDS fabG NC_014033.1 358133 358870 D identified by match to protein family HMM PF00106; match to protein family HMM PF08659; match to protein family HMM TIGR01830; 3-oxoacyl-[acyl-carrier-protein] reductase 358133..358870 Prevotella ruminicola 23 9002130 YP_003573685.1 CDS PRU_0298 NC_014033.1 358898 359569 D identified by match to protein family HMM PF00849; RNA pseudouridine synthase family protein 358898..359569 Prevotella ruminicola 23 9001516 YP_003573686.1 CDS PRU_0299 NC_014033.1 359574 364247 D identified by similarity to GB:AAO78911.1; hypothetical protein 359574..364247 Prevotella ruminicola 23 9001324 YP_003573687.1 CDS PRU_0300 NC_014033.1 364210 366573 D identified by match to protein family HMM PF01103; OMP85 family outer membrane protein 364210..366573 Prevotella ruminicola 23 9000552 YP_003573688.1 CDS PRU_0301 NC_014033.1 366666 367607 D identified by similarity to GB:AAO78913.1; hypothetical protein 366666..367607 Prevotella ruminicola 23 9000459 YP_003573689.1 CDS PRU_0302 NC_014033.1 367608 368639 D identified by match to protein family HMM PF01368; DHH family protein 367608..368639 Prevotella ruminicola 23 9002646 YP_003573690.1 CDS PRU_0303 NC_014033.1 368733 369350 D identified by similarity to GB:AAO79054.1; hypothetical protein 368733..369350 Prevotella ruminicola 23 9000998 YP_003573691.1 CDS PRU_0304 NC_014033.1 369369 370742 D identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphoglucomutase/phosphomannomutase family protein 369369..370742 Prevotella ruminicola 23 9002062 YP_003573692.1 CDS PRU_0305 NC_014033.1 370826 371608 D identified by glimmer; hypothetical protein 370826..371608 Prevotella ruminicola 23 9000357 YP_003573693.1 CDS groES NC_014033.1 371714 371986 D identified by similarity to SP:P28599; match to protein family HMM PF00166; chaperonin, 10 kDa 371714..371986 Prevotella ruminicola 23 9000980 YP_003573694.1 CDS groL NC_014033.1 372067 373698 D identified by similarity to GB:BAA04161.1; match to protein family HMM PF00118; match to protein family HMM TIGR02348; chaperonin GroEL 372067..373698 Prevotella ruminicola 23 9001931 YP_003573695.1 CDS sppA NC_014033.1 373928 375808 D identified by similarity to SP:P08395; match to protein family HMM PF01343; match to protein family HMM TIGR00705; match to protein family HMM TIGR00706; signal peptide peptidase SppA, 67K type 373928..375808 Prevotella ruminicola 23 9002436 YP_003573696.1 CDS lpxK NC_014033.1 375825 377009 D identified by similarity to SP:P27300; match to protein family HMM PF02606; match to protein family HMM TIGR00682; tetraacyldisaccharide 4'-kinase 375825..377009 Prevotella ruminicola 23 9002121 YP_003573697.1 CDS punA NC_014033.1 376894 377766 D identified by similarity to SP:P46354; match to protein family HMM PF00896; match to protein family HMM TIGR01697; match to protein family HMM TIGR01700; purine nucleoside phosphorylase I, inosine and guanosine-specific 376894..377766 Prevotella ruminicola 23 9000938 YP_003573698.1 CDS thiL NC_014033.1 377757 378863 D identified by similarity to SP:P77785; match to protein family HMM TIGR01379; thiamine-phosphate kinase 377757..378863 Prevotella ruminicola 23 9001411 YP_003573699.1 CDS PRU_0313 NC_014033.1 379183 380010 D identified by similarity to OMNI:SA2122; match to protein family HMM PF01869; pantothenate kinase 379183..380010 Prevotella ruminicola 23 9002782 YP_003573700.1 CDS PRU_0314 NC_014033.1 380015 380602 R identified by match to protein family HMM PF00583; GNAT family acetyltransferase complement(380015..380602) Prevotella ruminicola 23 9001472 YP_003573701.1 CDS PRU_0315 NC_014033.1 380604 381725 R identified by similarity to GB:AAP07432.1; hypothetical protein complement(380604..381725) Prevotella ruminicola 23 9002152 YP_003573702.1 CDS PRU_0316 NC_014033.1 381752 382852 R outer membrane protein complement(381752..382852) Prevotella ruminicola 23 9001081 YP_003573703.1 CDS PRU_0317 NC_014033.1 382849 384096 R identified by match to protein family HMM PF00668; condensation domain-containing protein complement(382849..384096) Prevotella ruminicola 23 9001897 YP_003573704.1 CDS PRU_0318 NC_014033.1 384130 388638 R identified by similarity to GB:CAA67864.1; match to protein family HMM PF00873; match to protein family HMM PF02321; match to protein family HMM TIGR01845; multidrug resistance protein, AcrB/AcrD family complement(384130..388638) Prevotella ruminicola 23 9002043 YP_003573705.1 CDS PRU_0319 NC_014033.1 388635 389777 R identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; RND family efflux transporter MFP subunit complement(388635..389777) Prevotella ruminicola 23 9000742 YP_003573706.1 CDS PRU_0320 NC_014033.1 389790 390920 R identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; RND family efflux transporter MFP subunit complement(389790..390920) Prevotella ruminicola 23 9000429 YP_003573707.1 CDS PRU_0321 NC_014033.1 390917 392278 R identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein complement(390917..392278) Prevotella ruminicola 23 9002464 YP_003573708.1 CDS PRU_0322 NC_014033.1 392501 393235 D identified by similarity to GB:CAG19648.1; hypothetical protein 392501..393235 Prevotella ruminicola 23 9001722 YP_003573709.1 CDS PRU_0323 NC_014033.1 393451 394671 R identified by similarity to GB:AAM06526.1; hypothetical protein complement(393451..394671) Prevotella ruminicola 23 9001648 YP_003573710.1 CDS PRU_0324 NC_014033.1 395450 395959 D identified by glimmer; hypothetical protein 395450..395959 Prevotella ruminicola 23 9000874 YP_003573711.1 CDS PRU_0325 NC_014033.1 396100 397491 D identified by match to protein family HMM PF02646; RmuC domain-containing protein 396100..397491 Prevotella ruminicola 23 9000095 YP_003573712.1 CDS PRU_0327 NC_014033.1 398037 398243 D identified by glimmer; hypothetical protein 398037..398243 Prevotella ruminicola 23 9002709 YP_003573713.1 CDS PRU_0329 NC_014033.1 398853 399815 R identified by glimmer; hypothetical protein complement(398853..399815) Prevotella ruminicola 23 9001177 YP_003573714.1 CDS PRU_0330 NC_014033.1 399831 400595 R identified by glimmer; hypothetical protein complement(399831..400595) Prevotella ruminicola 23 9002353 YP_003573715.1 CDS PRU_0331 NC_014033.1 400710 401432 R identified by match to protein family HMM TIGR02937; RNA polymerase sigma-70 factor family protein complement(400710..401432) Prevotella ruminicola 23 9000241 YP_003573716.1 CDS PRU_0332 NC_014033.1 401548 402612 R identified by match to protein family HMM PF02026; RyR domain-containing protein complement(401548..402612) Prevotella ruminicola 23 9000906 YP_003573717.1 CDS PRU_0333 NC_014033.1 402557 403246 R identified by glimmer; hypothetical protein complement(402557..403246) Prevotella ruminicola 23 9001498 YP_003573718.1 CDS PRU_0334 NC_014033.1 403256 403738 R identified by glimmer; hypothetical protein complement(403256..403738) Prevotella ruminicola 23 9002108 YP_003573719.1 CDS PRU_0335 NC_014033.1 403955 407275 R identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07720; match to protein family HMM PF08238; hypothetical protein complement(403955..407275) Prevotella ruminicola 23 9002576 YP_003573720.1 CDS PRU_0336 NC_014033.1 407320 409779 R identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF08238; hypothetical protein complement(407320..409779) Prevotella ruminicola 23 9000425 YP_003573721.1 CDS PRU_0337 NC_014033.1 409840 411165 R identified by similarity to PIR:F95132; hypothetical protein complement(409840..411165) Prevotella ruminicola 23 9001096 YP_003573722.1 CDS PRU_0338 NC_014033.1 411177 411962 R identified by glimmer; hypothetical protein complement(411177..411962) Prevotella ruminicola 23 9001640 YP_003573723.1 CDS nudF NC_014033.1 412562 412981 D identified by similarity to SP:Q58549; match to protein family HMM PF00293; ADP-ribose pyrophosphatase 412562..412981 Prevotella ruminicola 23 9000953 YP_003573724.1 CDS PRU_0341 NC_014033.1 412982 413452 R identified by similarity to GB:AAO75146.1; hypothetical protein complement(412982..413452) Prevotella ruminicola 23 9002580 YP_003573725.1 CDS PRU_0342 NC_014033.1 413453 416086 R protein kinase domain-containing protein complement(413453..416086) Prevotella ruminicola 23 9002176 YP_003573726.1 CDS PRU_0344 NC_014033.1 416931 417698 D identified by similarity to GB:CAD76352.1; match to protein family HMM TIGR02452; hypothetical protein 416931..417698 Prevotella ruminicola 23 9001198 YP_003573727.1 CDS PRU_0345 NC_014033.1 417713 418213 D identified by similarity to PIR:B83074; match to protein family HMM PF08719; match to protein family HMM TIGR02464; hypothetical protein 417713..418213 Prevotella ruminicola 23 9001876 YP_003573728.1 CDS PRU_0346 NC_014033.1 418221 418937 D identified by match to protein family HMM PF04542; match to protein family HMM TIGR02937; sigma factor 418221..418937 Prevotella ruminicola 23 9002418 YP_003573729.1 CDS PRU_0347 NC_014033.1 418976 420205 D identified by glimmer; hypothetical protein 418976..420205 Prevotella ruminicola 23 9000055 YP_003573730.1 CDS PRU_0348 NC_014033.1 420454 422214 D identified by similarity to GB:AAP77658.1; match to protein family HMM PF03235; hypothetical protein 420454..422214 Prevotella ruminicola 23 9000718 YP_003573731.1 CDS PRU_0349 NC_014033.1 422386 423126 D identified by similarity to GB:AAO77615.1; hypothetical protein 422386..423126 Prevotella ruminicola 23 9001682 YP_003573732.1 CDS PRU_0350 NC_014033.1 423193 424275 R identified by match to protein family HMM PF01661; Appr-1-p processing enzyme domain-containing protein complement(423193..424275) Prevotella ruminicola 23 9000667 YP_003573733.1 CDS PRU_0351 NC_014033.1 424427 425383 D identified by similarity to GB:AAO76038.1; hypothetical protein 424427..425383 Prevotella ruminicola 23 9001072 YP_003573734.1 CDS PRU_0353 NC_014033.1 426395 428407 D identified by glimmer; hypothetical protein 426395..428407 Prevotella ruminicola 23 9000426 YP_003573735.1 CDS PRU_0354 NC_014033.1 428451 429263 D identified by glimmer; hypothetical protein 428451..429263 Prevotella ruminicola 23 9002048 YP_003573736.1 CDS PRU_0355 NC_014033.1 429428 430081 D identified by glimmer; hypothetical protein 429428..430081 Prevotella ruminicola 23 9000688 YP_003573737.1 CDS PRU_0356 NC_014033.1 430299 431030 R identified by similarity to SP:P55923; match to protein family HMM PF01695; ISPru1 transposase orfB complement(430299..431030) Prevotella ruminicola 23 9000096 YP_003573738.1 CDS PRU_0357 NC_014033.1 431047 432600 R identified by similarity to SP:Q51761; match to protein family HMM PF00665; ISPru1 transposase orfA complement(431047..432600) Prevotella ruminicola 23 9002175 YP_003573739.1 CDS PRU_0358 NC_014033.1 432808 433344 R identified by similarity to SP:P09184; match to protein family HMM PF03852; match to protein family HMM TIGR00632; DNA mismatch endonuclease Vsr family protein complement(432808..433344) Prevotella ruminicola 23 9001407 YP_003573740.1 CDS PRU_0359 NC_014033.1 433352 435670 R identified by glimmer; hypothetical protein complement(433352..435670) Prevotella ruminicola 23 9000098 YP_003573741.1 CDS PRU_0360 NC_014033.1 435667 438102 R identified by similarity to SP:P15005; restriction endonuclease complement(435667..438102) Prevotella ruminicola 23 9002053 YP_003573742.1 CDS PRU_0361 NC_014033.1 438109 439137 R identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675; overlaps another CDS with the same product name; C-5 cytosine-specific family DNA methylase complement(438109..439137) Prevotella ruminicola 23 9001301 YP_003573743.1 CDS PRU_0362 NC_014033.1 439137 440177 R identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675; overlaps another CDS with the same product name; C-5 cytosine-specific family DNA methylase complement(439137..440177) Prevotella ruminicola 23 9001906 YP_003573744.1 CDS PRU_0363 NC_014033.1 440911 441306 R identified by similarity to GB:BAC44285.1; hypothetical protein complement(440911..441306) Prevotella ruminicola 23 9002097 YP_003573745.1 CDS PRU_0364 NC_014033.1 441442 441855 R identified by similarity to GB:AAS95986.1; hypothetical protein complement(441442..441855) Prevotella ruminicola 23 9000696 YP_003573746.1 CDS PRU_0365 NC_014033.1 441900 444290 R identified by glimmer; hypothetical protein complement(441900..444290) Prevotella ruminicola 23 9001663 YP_003573747.1 CDS PRU_0367 NC_014033.1 445038 445970 R identified by glimmer; hypothetical protein complement(445038..445970) Prevotella ruminicola 23 9002262 YP_003573748.1 CDS PRU_0368 NC_014033.1 446640 447191 D identified by similarity to GB:AAO76747.1; hypothetical protein 446640..447191 Prevotella ruminicola 23 9002753 YP_003573749.1 CDS PRU_0369 NC_014033.1 447427 448533 R hypothetical protein complement(447427..448533) Prevotella ruminicola 23 9000045 YP_003573750.1 CDS PRU_0370 NC_014033.1 448530 449609 R identified by similarity to GB:CAD78495.1; match to protein family HMM PF07728; hypothetical protein complement(448530..449609) Prevotella ruminicola 23 9000802 YP_003573751.1 CDS PRU_0372 NC_014033.1 450390 452051 R identified by match to protein family HMM PF00004; AAA family ATPase complement(450390..452051) Prevotella ruminicola 23 9000631 YP_003573752.1 CDS PRU_0373 NC_014033.1 452300 452896 R identified by match to protein family HMM PF00702; haloacid dehalogenase-like hydrolase domain-containing protein complement(452300..452896) Prevotella ruminicola 23 9001519 YP_003573753.1 CDS PRU_0374 NC_014033.1 453032 456331 R identified by match to protein family HMM PF00580; UvrD/Rep helicase family protein complement(453032..456331) Prevotella ruminicola 23 9002113 YP_003573754.1 CDS PRU_0375 NC_014033.1 456328 458790 R identified by glimmer; hypothetical protein complement(456328..458790) Prevotella ruminicola 23 9000292 YP_003573755.1 CDS PRU_0376 NC_014033.1 459278 459967 D identified by glimmer; hypothetical protein 459278..459967 Prevotella ruminicola 23 9000899 YP_003573756.1 CDS PRU_0377 NC_014033.1 460059 461018 D identified by glimmer; hypothetical protein 460059..461018 Prevotella ruminicola 23 9000723 YP_003573757.1 CDS PRU_0380 NC_014033.1 462148 463215 D identified by match to protein family HMM PF02661; Fic family protein 462148..463215 Prevotella ruminicola 23 9002738 YP_003573758.1 CDS PRU_0381 NC_014033.1 463224 465578 R identified by similarity to SP:P14300; match to protein family HMM PF03747; ADP-ribosylglycohydrolase family protein complement(463224..465578) Prevotella ruminicola 23 9001405 YP_003573759.1 CDS PRU_0382 NC_014033.1 465672 466289 R identified by similarity to GB:AAP16260.1; hypothetical protein complement(465672..466289) Prevotella ruminicola 23 9000649 YP_003573760.1 CDS PRU_0384 NC_014033.1 467045 468691 D identified by match to protein family HMM PF00294; pfkB family kinase 467045..468691 Prevotella ruminicola 23 9000165 YP_003573761.1 CDS PRU_0385 NC_014033.1 468698 469402 D identified by glimmer; hypothetical protein 468698..469402 Prevotella ruminicola 23 9002490 YP_003573762.1 CDS PRU_0386 NC_014033.1 469434 470306 R identified by similarity to GB:AAB07555.1; match to protein family HMM PF00140; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; RNA polymerase sigma-70 factor complement(469434..470306) Prevotella ruminicola 23 9001754 YP_003573763.1 CDS PRU_0387 NC_014033.1 470388 471215 D hypothetical protein 470388..471215 Prevotella ruminicola 23 9002505 YP_003573764.1 CDS hisC NC_014033.1 471281 472339 R identified by similarity to SP:P06986; match to protein family HMM PF00155; match to protein family HMM TIGR01141; histidinol-phosphate transaminase complement(471281..472339) Prevotella ruminicola 23 9000593 YP_003573765.1 CDS hisD NC_014033.1 472361 473653 R identified by similarity to SP:P06988; match to protein family HMM PF00815; match to protein family HMM TIGR00069; histidinol dehydrogenase complement(472361..473653) Prevotella ruminicola 23 9002013 YP_003573766.1 CDS hisG NC_014033.1 473650 474531 R identified by match to protein family HMM PF01634; match to protein family HMM PF08029; match to protein family HMM TIGR00070; match to protein family HMM TIGR03455; ATP phosphoribosyltransferase complement(473650..474531) Prevotella ruminicola 23 9002607 YP_003573767.1 CDS PRU_0391 NC_014033.1 474620 475753 D identified by match to protein family HMM PF01464; transglycosylase SLT domain-containing protein 474620..475753 Prevotella ruminicola 23 9000816 YP_003573768.1 CDS rpiB NC_014033.1 475899 476342 R identified by similarity to SP:P37351; match to protein family HMM PF02502; match to protein family HMM TIGR00689; match to protein family HMM TIGR01120; ribose-5-phosphate isomerase B complement(475899..476342) Prevotella ruminicola 23 9001087 YP_003573769.1 CDS PRU_0393 NC_014033.1 476445 478439 R identified by similarity to SP:P45694; match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; transketolase complement(476445..478439) Prevotella ruminicola 23 9001269 YP_003573770.1 CDS PRU_0394 NC_014033.1 478578 481040 R identified by match to protein family HMM PF00703; match to protein family HMM PF02837; family 2 glycosyl hydrolase complement(478578..481040) Prevotella ruminicola 23 9001813 YP_003573771.1 CDS PRU_0395 NC_014033.1 481155 481979 R identified by match to protein family HMM PF00480; ROK family protein complement(481155..481979) Prevotella ruminicola 23 9002107 YP_003573772.1 CDS PRU_0396 NC_014033.1 481963 483273 R identified by match to protein family HMM PF00328; histidine acid phosphatase family protein complement(481963..483273) Prevotella ruminicola 23 9000607 YP_003573773.1 CDS PRU_0397 NC_014033.1 483394 484161 D identified by match to protein family HMM PF00795; carbon-nitrogen family hydrolase 483394..484161 Prevotella ruminicola 23 9002396 YP_003573774.1 CDS PRU_0398 NC_014033.1 484148 485044 R identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation diffusion facilitator family transporter complement(484148..485044) Prevotella ruminicola 23 9001039 YP_003573775.1 CDS thiS NC_014033.1 485228 485425 D identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683; thiamine biosynthesis protein ThiS 485228..485425 Prevotella ruminicola 23 9001043 YP_003573776.1 CDS thiE NC_014033.1 485413 486051 D identified by match to protein family HMM PF02581; match to protein family HMM TIGR00693; thiamine-phosphate diphosphorylase 485413..486051 Prevotella ruminicola 23 9000528 YP_003573777.1 CDS thiG NC_014033.1 486044 486817 D identified by similarity to SP:P30139; match to protein family HMM PF05690; thiazole biosynthesis protein ThiG 486044..486817 Prevotella ruminicola 23 9002710 YP_003573778.1 CDS thiC NC_014033.1 486838 488424 D identified by similarity to SP:P45740; match to protein family HMM PF01964; match to protein family HMM TIGR00190; thiamine biosynthesis protein ThiC 486838..488424 Prevotella ruminicola 23 9001973 YP_003573779.1 CDS PRU_0403 NC_014033.1 488459 489259 D identified by match to protein family HMM PF00899; match to protein family HMM PF05237; ThiF/MoeB/HesA family protein 488459..489259 Prevotella ruminicola 23 9001180 YP_003573780.1 CDS thiH NC_014033.1 489268 490401 D identified by similarity to SP:P30140; match to protein family HMM PF04055; match to protein family HMM PF06968; match to protein family HMM TIGR02351; thiazole biosynthesis protein ThiH 489268..490401 Prevotella ruminicola 23 9000875 YP_003573781.1 CDS PRU_0405 NC_014033.1 490398 490934 D identified by similarity to SP:P39594; match to protein family HMM PF02581; thiamine-phosphate pyrophosphorylase 490398..490934 Prevotella ruminicola 23 9002571 YP_003573782.1 CDS thiD NC_014033.1 490925 491722 D identified by similarity to SP:P76422; match to protein family HMM PF08543; match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase 490925..491722 Prevotella ruminicola 23 9001996 YP_003573783.1 CDS PRU_0407 NC_014033.1 491809 492171 R identified by similarity to GB:AAO77285.1; hypothetical protein complement(491809..492171) Prevotella ruminicola 23 9002000 YP_003573784.1 CDS PRU_0408 NC_014033.1 492428 493966 R identified by match to protein family HMM PF00135; carboxylesterase complement(492428..493966) Prevotella ruminicola 23 9002544 YP_003573785.1 CDS PRU_0409 NC_014033.1 494047 494970 R identified by match to protein family HMM PF01734; phospholipase complement(494047..494970) Prevotella ruminicola 23 9002163 YP_003573786.1 CDS PRU_0410 NC_014033.1 494918 495988 D identified by match to protein family HMM PF00892; hypothetical protein 494918..495988 Prevotella ruminicola 23 9001207 YP_003573787.1 CDS PRU_0411 NC_014033.1 496193 497164 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 496193..497164 Prevotella ruminicola 23 9000939 YP_003573788.1 CDS PRU_0412 NC_014033.1 497434 499089 D identified by similarity to GB:AAF72520.1; match to protein family HMM PF00884; sulfatase family protein 497434..499089 Prevotella ruminicola 23 9001399 YP_003573789.1 CDS PRU_0413 NC_014033.1 499079 500278 D identified by similarity to SP:Q02550; match to protein family HMM PF04055; match to protein family HMM TIGR03942; sulfatase-activating enzyme 499079..500278 Prevotella ruminicola 23 9002446 YP_003573790.1 CDS PRU_0414 NC_014033.1 500452 500874 D identified by match to protein family HMM PF00011; heat shock protein 500452..500874 Prevotella ruminicola 23 9000256 YP_003573791.1 CDS PRU_0415 NC_014033.1 501028 502464 R lipoprotein complement(501028..502464) Prevotella ruminicola 23 9001244 YP_003573792.1 CDS bglX NC_014033.1 502882 505128 R identified by similarity to SP:P33363; match to protein family HMM PF00933; match to protein family HMM PF01915; beta-glucosidase complement(502882..505128) Prevotella ruminicola 23 9001854 YP_003573793.1 CDS PRU_0417 NC_014033.1 505257 506051 D lipase/acylhydrolase 505257..506051 Prevotella ruminicola 23 9001463 YP_003573794.1 CDS PRU_0418 NC_014033.1 506067 507659 R identified by similarity to GB:AAN05450.1; match to protein family HMM PF06964; alpha-N-arabinofuranosidase complement(506067..507659) Prevotella ruminicola 23 9000542 YP_003573795.1 CDS PRU_0419 NC_014033.1 507674 509269 R identified by match to protein family HMM PF00370; match to protein family HMM PF02782; carbohydrate kinase domain-containing protein complement(507674..509269) Prevotella ruminicola 23 9000499 YP_003573796.1 CDS araA NC_014033.1 509287 510825 R identified by similarity to SP:P08202; match to protein family HMM PF02610; L-arabinose isomerase complement(509287..510825) Prevotella ruminicola 23 9001291 YP_003573797.1 CDS PRU_0421 NC_014033.1 510865 511575 R identified by match to protein family HMM PF00596; L-ribulose-5-phosphate 4-epimerase complement(510865..511575) Prevotella ruminicola 23 9001721 YP_003573798.1 CDS PRU_0422 NC_014033.1 511581 512255 R identified by match to protein family HMM PF00293; NUDIX family hydrolase complement(511581..512255) Prevotella ruminicola 23 9002516 YP_003573799.1 CDS PRU_0423 NC_014033.1 512271 514016 R identified by match to protein family HMM PF00474; match to protein family HMM TIGR00813; SSS family transporter complement(512271..514016) Prevotella ruminicola 23 9000989 YP_003573800.1 CDS galM_1 NC_014033.1 514095 515249 R identified by similarity to SP:P05149; match to protein family HMM PF01263; aldose 1-epimerase complement(514095..515249) Prevotella ruminicola 23 9001456 YP_003573801.1 CDS galK NC_014033.1 515456 516619 R identified by similarity to SP:P39574; match to protein family HMM PF00288; match to protein family HMM PF08544; match to protein family HMM TIGR00131; galactokinase complement(515456..516619) Prevotella ruminicola 23 9002223 YP_003573802.1 CDS PRU_0426 NC_014033.1 516646 517923 R identified by similarity to SP:Q44623; fucose:hydrogen symporter (FHS) family sugar transporter complement(516646..517923) Prevotella ruminicola 23 9001287 YP_003573803.1 CDS galM_2 NC_014033.1 517960 519051 R identified by similarity to SP:P05149; match to protein family HMM PF01263; aldose 1-epimerase complement(517960..519051) Prevotella ruminicola 23 9002627 YP_003573804.1 CDS folC NC_014033.1 519159 520472 R identified by similarity to SP:Q05865; match to protein family HMM PF08245; match to protein family HMM TIGR01499; tetrahydrofolate synthase complement(519159..520472) Prevotella ruminicola 23 9002031 YP_003573805.1 CDS dnaJ NC_014033.1 520494 521654 R identified by similarity to SP:P08622; match to protein family HMM PF00226; match to protein family HMM PF00684; match to protein family HMM PF01556; match to protein family HMM TIGR02349; chaperone protein DnaJ complement(520494..521654) Prevotella ruminicola 23 9002011 YP_003573806.1 CDS grpE NC_014033.1 521690 522280 R identified by similarity to SP:P15874; match to protein family HMM PF01025; co-chaperone GrpE complement(521690..522280) Prevotella ruminicola 23 9001053 YP_003573807.1 CDS PRU_0431 NC_014033.1 522363 523976 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(522363..523976) Prevotella ruminicola 23 9002273 YP_003573808.1 CDS PRU_0432 NC_014033.1 524346 525224 D identified by glimmer; hypothetical protein 524346..525224 Prevotella ruminicola 23 9001492 YP_003573809.1 CDS PRU_0433 NC_014033.1 526346 527374 D identified by match to protein family HMM PF00483; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 526346..527374 Prevotella ruminicola 23 9000768 YP_003573810.1 CDS PRU_0434 NC_014033.1 527446 528255 D identified by similarity to GB:AAA27631.1; match to protein family HMM TIGR02623; glucose-1-phosphate cytidylyltransferase 527446..528255 Prevotella ruminicola 23 9002728 YP_003573811.1 CDS PRU_0435 NC_014033.1 528263 529339 D identified by similarity to GB:AAA88700.1; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF07993; match to protein family HMM TIGR02622; CDP-D-glucose-4,6-dehydratase 528263..529339 Prevotella ruminicola 23 9000594 YP_003573812.1 CDS PRU_0436 NC_014033.1 529339 530244 D identified by match to protein family HMM PF01370; nucleoside diphosphate sugar epimerase family protein 529339..530244 Prevotella ruminicola 23 9001358 YP_003573813.1 CDS rfbC_2 NC_014033.1 530244 530813 D identified by match to protein family HMM PF00908; match to protein family HMM TIGR01221; dTDP-4-dehydrorhamnose 3,5-epimerase 530244..530813 Prevotella ruminicola 23 9001566 YP_003573814.1 CDS PRU_0438 NC_014033.1 530820 531788 D identified by similarity to GB:BAC09938.1; hypothetical protein 530820..531788 Prevotella ruminicola 23 9002202 YP_003573815.1 CDS PRU_0439 NC_014033.1 531793 533316 D identified by similarity to GB:CAG37943.1; match to protein family HMM PF01943; hypothetical protein 531793..533316 Prevotella ruminicola 23 9002420 YP_003573816.1 CDS PRU_0440 NC_014033.1 533317 534456 D identified by match to protein family HMM PF00534; group 1 family glycosyltransferase 533317..534456 Prevotella ruminicola 23 9000958 YP_003573817.1 CDS PRU_0441 NC_014033.1 534481 535626 D hypothetical protein 534481..535626 Prevotella ruminicola 23 9001325 YP_003573818.1 CDS PRU_0442 NC_014033.1 535623 536402 D identified by match to protein family HMM PF00535; group 2 family glycosyltransferase 535623..536402 Prevotella ruminicola 23 9001795 YP_003573819.1 CDS PRU_0443 NC_014033.1 536377 537039 D identified by similarity to GB:AAT77178.1; wbuN protein 536377..537039 Prevotella ruminicola 23 9002087 YP_003573820.1 CDS PRU_0444 NC_014033.1 537018 537803 D identified by similarity to GB:AAT77179.1; wbuO protein 537018..537803 Prevotella ruminicola 23 9000586 YP_003573821.1 CDS kdsA_1 NC_014033.1 537868 538623 D identified by similarity to SP:Q46225; match to protein family HMM PF00793; match to protein family HMM TIGR01362; 3-deoxy-8-phosphooctulonate synthase 537868..538623 Prevotella ruminicola 23 9001136 YP_003573822.1 CDS PRU_0446 NC_014033.1 538631 539578 D identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393; sugar isomerase, KpsF/GutQ family 538631..539578 Prevotella ruminicola 23 9001930 YP_003573823.1 CDS PRU_0447 NC_014033.1 539569 540243 D identified by match to protein family HMM PF02348; hypothetical protein 539569..540243 Prevotella ruminicola 23 9001726 YP_003573824.1 CDS PRU_0448 NC_014033.1 540243 541247 D identified by similarity to GB:AAO76818.1; hypothetical protein 540243..541247 Prevotella ruminicola 23 9002282 YP_003573825.1 CDS PRU_0449 NC_014033.1 541252 542478 D identified by similarity to GB:AAO58965.1; hypothetical protein 541252..542478 Prevotella ruminicola 23 9001238 YP_003573826.1 CDS PRU_0450 NC_014033.1 542523 543452 D identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD-dependent epimerase/dehydratase family protein 542523..543452 Prevotella ruminicola 23 9001836 YP_003573827.1 CDS PRU_0451 NC_014033.1 543449 544573 D identified by match to protein family HMM PF00534; group 1 family glycosyltransferase 543449..544573 Prevotella ruminicola 23 9000925 YP_003573828.1 CDS PRU_0452 NC_014033.1 544578 545591 D identified by similarity to SP:Q8X7P7; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; polysaccharide biosynthesis protein 544578..545591 Prevotella ruminicola 23 9001614 YP_003573829.1 CDS PRU_0453 NC_014033.1 546061 546585 D identified by glimmer; hypothetical protein 546061..546585 Prevotella ruminicola 23 9000433 YP_003573830.1 CDS PRU_0454 NC_014033.1 546678 547454 D identified by similarity to GB:CAB61226.1; match to protein family HMM PF07605; hypothetical protein 546678..547454 Prevotella ruminicola 23 9002372 YP_003573831.1 CDS hisB NC_014033.1 547502 548572 R identified by similarity to SP:P06987; match to protein family HMM PF00475; match to protein family HMM TIGR01261; match to protein family HMM TIGR01656; histidinol-phosphatase/imidazoleglycerol- phosphate dehydratase complement(547502..548572) Prevotella ruminicola 23 9000240 YP_003573832.1 CDS PRU_0456 NC_014033.1 548569 549228 R identified by glimmer; hypothetical protein complement(548569..549228) Prevotella ruminicola 23 9001453 YP_003573833.1 CDS PRU_0457 NC_014033.1 549325 550317 D identified by match to protein family HMM PF01408; match to protein family HMM PF02894; oxidoreductase 549325..550317 Prevotella ruminicola 23 9000804 YP_003573834.1 CDS PRU_0458 NC_014033.1 550363 551424 D identified by similarity to GB:AAO76548.1; hypothetical protein 550363..551424 Prevotella ruminicola 23 9001239 YP_003573835.1 CDS PRU_0459 NC_014033.1 551421 552284 D identified by similarity to PIR:B82212; match to protein family HMM PF07313; hypothetical protein 551421..552284 Prevotella ruminicola 23 9000615 YP_003573836.1 CDS PRU_0460 NC_014033.1 552315 552707 D identified by similarity to GB:AAN53403.1; match to protein family HMM PF06803; hypothetical protein 552315..552707 Prevotella ruminicola 23 9001828 YP_003573837.1 CDS PRU_0462 NC_014033.1 553107 554144 R identified by match to protein family HMM PF00781; match to protein family HMM TIGR00147; hypothetical protein complement(553107..554144) Prevotella ruminicola 23 9002812 YP_003573838.1 CDS PRU_0463 NC_014033.1 554308 555495 D identified by match to protein family HMM PF00155; match to protein family HMM PF00202; 8-amino-7-oxononanoate synthase 554308..555495 Prevotella ruminicola 23 9000567 YP_003573839.1 CDS PRU_0465 NC_014033.1 555875 558376 D identified by match to protein family HMM PF02018; family 51 glycosyl hydrolase 555875..558376 Prevotella ruminicola 23 9002786 YP_003573840.1 CDS msrA NC_014033.1 558450 558971 D identified by match to protein family HMM PF01625; match to protein family HMM TIGR00401; methionine-S-sulfoxide reductase 558450..558971 Prevotella ruminicola 23 9000830 YP_003573841.1 CDS PRU_0467 NC_014033.1 558975 559520 D identified by similarity to GB:CAD84583.1; match to protein family HMM PF01863; hypothetical protein 558975..559520 Prevotella ruminicola 23 9002619 YP_003573842.1 CDS PRU_0468 NC_014033.1 559597 561168 D identified by match to protein family HMM PF00675; match to protein family HMM PF05193; M16 family peptidase 559597..561168 Prevotella ruminicola 23 9000634 YP_003573843.1 CDS PRU_0469 NC_014033.1 561284 562651 D identified by match to protein family HMM PF05193; M16 family peptidase 561284..562651 Prevotella ruminicola 23 9001101 YP_003573844.1 CDS PRU_0470 NC_014033.1 562717 564474 R identified by similarity to SP:P23013; match to protein family HMM PF00004; cfxQ domain-containing protein complement(562717..564474) Prevotella ruminicola 23 9001868 YP_003573845.1 CDS PRU_0471 NC_014033.1 565415 566332 R identified by match to protein family HMM PF01758; sodium/bile acid symporter family protein complement(565415..566332) Prevotella ruminicola 23 9002323 YP_003573846.1 CDS PRU_0472 NC_014033.1 566466 567047 D identified by match to protein family HMM PF01381; match to protein family HMM PF07883; DNA-binding protein 566466..567047 Prevotella ruminicola 23 9000794 YP_003573847.1 CDS PRU_0473 NC_014033.1 567106 568812 D identified by match to protein family HMM PF00501; AMP-binding enzyme 567106..568812 Prevotella ruminicola 23 9000581 YP_003573848.1 CDS PRU_0474 NC_014033.1 568857 571307 D identified by match to protein family HMM PF07494; match to protein family HMM PF07495; two-component regulator 568857..571307 Prevotella ruminicola 23 9002562 YP_003573849.1 CDS PRU_0475 NC_014033.1 571276 572493 R identified by similarity to GB:AAQ67052.1; hypothetical protein complement(571276..572493) Prevotella ruminicola 23 9001834 YP_003573850.1 CDS PRU_0476 NC_014033.1 572490 574463 R identified by similarity to GB:CAB16056.1; match to protein family HMM PF06874; fructose-1,6-bisphosphatase complement(572490..574463) Prevotella ruminicola 23 9001856 YP_003573851.1 CDS PRU_0477 NC_014033.1 574460 575479 R identified by similarity to GB:AAM22594.1; hypothetical protein complement(574460..575479) Prevotella ruminicola 23 9001240 YP_003573852.1 CDS PRU_0478 NC_014033.1 575508 576176 R identified by match to protein family HMM PF00535; group 2 family glycosyltransferase complement(575508..576176) Prevotella ruminicola 23 9001877 YP_003573853.1 CDS lysA NC_014033.1 576206 577366 R identified by match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01048; diaminopimelate decarboxylase complement(576206..577366) Prevotella ruminicola 23 9001464 YP_003573854.1 CDS lysC NC_014033.1 577416 578735 R identified by similarity to SP:P08660; match to protein family HMM PF00696; match to protein family HMM TIGR00657; aspartate kinase complement(577416..578735) Prevotella ruminicola 23 9000610 YP_003573855.1 CDS PRU_0481 NC_014033.1 578807 579490 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(578807..579490) Prevotella ruminicola 23 9000539 YP_003573856.1 CDS hisIE NC_014033.1 579518 580162 R identified by similarity to SP:P06989; match to protein family HMM PF01502; match to protein family HMM PF01503; match to protein family HMM TIGR03188; phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase complement(579518..580162) Prevotella ruminicola 23 9001356 YP_003573857.1 CDS hisF NC_014033.1 580195 580953 R identified by similarity to SP:O34727; match to protein family HMM PF00977; match to protein family HMM TIGR00735; imidazoleglycerol phosphate synthase, cyclase subunit complement(580195..580953) Prevotella ruminicola 23 9001518 YP_003573858.1 CDS hisA NC_014033.1 580956 581675 R identified by match to protein family HMM PF00977; match to protein family HMM TIGR00007; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase complement(580956..581675) Prevotella ruminicola 23 9000177 YP_003573859.1 CDS hisH NC_014033.1 581672 582313 R identified by match to protein family HMM PF00117; match to protein family HMM PF07685; match to protein family HMM TIGR01855; imidazole glycerol phosphate synthase, glutamine amidotransferase subunit complement(581672..582313) Prevotella ruminicola 23 9002645 YP_003573860.1 CDS purU NC_014033.1 582338 583201 R identified by match to protein family HMM PF00551; match to protein family HMM PF01842; match to protein family HMM TIGR00655; formyltetrahydrofolate deformylase complement(582338..583201) Prevotella ruminicola 23 9001851 YP_003573861.1 CDS PRU_0487 NC_014033.1 583391 583858 D identified by match to protein family HMM PF01272; match to protein family HMM PF03449; match to protein family HMM TIGR01462; transcription elongation factor GreA family protein 583391..583858 Prevotella ruminicola 23 9000021 YP_003573862.1 CDS PRU_0488 NC_014033.1 583873 584628 D identified by match to protein family HMM PF00106; match to protein family HMM PF01370; match to protein family HMM PF08659; short chain dehydrogenase/reductase family oxidoreductase 583873..584628 Prevotella ruminicola 23 9000619 YP_003573863.1 CDS PRU_0489 NC_014033.1 584650 585141 R identified by glimmer; hypothetical protein complement(584650..585141) Prevotella ruminicola 23 9001609 YP_003573864.1 CDS PRU_0490 NC_014033.1 585122 587200 R lipoprotein complement(585122..587200) Prevotella ruminicola 23 9000815 YP_003573865.1 CDS PRU_0491 NC_014033.1 587286 588113 R identified by match to protein family HMM PF04397; regulatory protein complement(587286..588113) Prevotella ruminicola 23 9000317 YP_003573866.1 CDS PRU_0492 NC_014033.1 588257 588949 D identified by similarity to GB:BAC58637.1; match to protein family HMM PF04402; hypothetical protein 588257..588949 Prevotella ruminicola 23 9002326 YP_003573867.1 CDS PRU_0493 NC_014033.1 588973 589701 R identified by similarity to SP:P87051; match to protein family HMM PF00160; peptidyl-prolyl cis-trans isomerase complement(588973..589701) Prevotella ruminicola 23 9001951 YP_003573868.1 CDS PRU_0494 NC_014033.1 589797 590528 D identified by match to protein family HMM PF03591; branched chain amino acid exporter 589797..590528 Prevotella ruminicola 23 9002477 YP_003573869.1 CDS PRU_0495 NC_014033.1 590521 590829 D identified by similarity to GB:CAF30139.1; match to protein family HMM PF05437; hypothetical protein 590521..590829 Prevotella ruminicola 23 9002430 YP_003573870.1 CDS PRU_0496 NC_014033.1 590843 592114 D identified by similarity to GB:CAC33162.1; match to protein family HMM PF00544; pectate lyase 590843..592114 Prevotella ruminicola 23 9001802 YP_003573871.1 CDS PRU_0497 NC_014033.1 592347 593237 D identified by similarity to GB:AAO77616.1; hypothetical protein 592347..593237 Prevotella ruminicola 23 9002361 YP_003573872.1 CDS PRU_0499 NC_014033.1 593432 594538 D identified by similarity to SP:Q92XH8; match to protein family HMM PF00817; DNA polymerase IV 593432..594538 Prevotella ruminicola 23 9000551 YP_003573873.1 CDS PRU_0500 NC_014033.1 594847 596229 D identified by match to protein family HMM PF02321; outer membrane efflux protein 594847..596229 Prevotella ruminicola 23 9001817 YP_003573874.1 CDS PRU_0501 NC_014033.1 596232 597260 D identified by match to protein family HMM PF00529; MFP family transporter 596232..597260 Prevotella ruminicola 23 9001803 YP_003573875.1 CDS PRU_0502 NC_014033.1 597311 598891 D identified by similarity to GB:AAO76355.1; hypothetical protein 597311..598891 Prevotella ruminicola 23 9001577 YP_003573876.1 CDS PRU_0503 NC_014033.1 598917 599294 R identified by match to protein family HMM PF01638; transcriptional regulator complement(598917..599294) Prevotella ruminicola 23 9000200 YP_003573877.1 CDS PRU_0504 NC_014033.1 599691 600086 D identified by similarity to GB:AAM06972.1; match to protein family HMM PF07883; cupin domain-containing protein 599691..600086 Prevotella ruminicola 23 9002530 YP_003573878.1 CDS PRU_0505 NC_014033.1 600080 600559 D identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase family protein 600080..600559 Prevotella ruminicola 23 9001749 YP_003573879.1 CDS PRU_0506 NC_014033.1 600947 601462 D identified by similarity to GB:CAA50581.1; match to protein family HMM PF01243; nitroimidazole resistance protein 600947..601462 Prevotella ruminicola 23 9001307 YP_003573880.1 CDS PRU_0507 NC_014033.1 601506 601910 R identified by similarity to GB:CAD65202.1; hypothetical protein complement(601506..601910) Prevotella ruminicola 23 9000695 YP_003573881.1 CDS PRU_0508 NC_014033.1 601907 603418 R identified by match to protein family HMM PF00817; ImpB/MucB/SamB family protein complement(601907..603418) Prevotella ruminicola 23 9002602 YP_003573882.1 CDS PRU_0509 NC_014033.1 603535 604194 D identified by similarity to SP:P00484; match to protein family HMM PF00302; chloramphenicol O-acetyltransferase 603535..604194 Prevotella ruminicola 23 9002166 YP_003573883.1 CDS PRU_0510 NC_014033.1 604447 605271 D hydrolase 604447..605271 Prevotella ruminicola 23 9001402 YP_003573884.1 CDS PRU_0511 NC_014033.1 605425 607959 R identified by match to protein family HMM PF02018; match to protein family HMM PF06964; family 51 glycosyl hydrolase complement(605425..607959) Prevotella ruminicola 23 9000932 YP_003573885.1 CDS PRU_0513 NC_014033.1 608962 609498 D identified by similarity to GB:BAC81190.1; match to protein family HMM PF00578; thiol-disulfide oxidoreductase 608962..609498 Prevotella ruminicola 23 9002279 YP_003573886.1 CDS PRU_0514 NC_014033.1 609539 610549 D identified by glimmer; hypothetical protein 609539..610549 Prevotella ruminicola 23 9002365 YP_003573887.1 CDS PRU_0515 NC_014033.1 610572 612938 D identified by match to protein family HMM PF01650; C13 family peptidase 610572..612938 Prevotella ruminicola 23 9000016 YP_003573888.1 CDS PRU_0516 NC_014033.1 612980 613642 D lipoprotein 612980..613642 Prevotella ruminicola 23 9001720 YP_003573889.1 CDS PRU_0517 NC_014033.1 613655 614278 D lipoprotein 613655..614278 Prevotella ruminicola 23 9001584 YP_003573890.1 CDS PRU_0518 NC_014033.1 614328 614948 D lipoprotein 614328..614948 Prevotella ruminicola 23 9000132 YP_003573891.1 CDS PRU_0519 NC_014033.1 614978 615655 D lipoprotein 614978..615655 Prevotella ruminicola 23 9000713 YP_003573892.1 CDS PRU_0520 NC_014033.1 615875 616108 D identified by similarity to GB:AAK73613.1; hypothetical protein 615875..616108 Prevotella ruminicola 23 9002689 YP_003573893.1 CDS PRU_0521 NC_014033.1 616347 617036 D identified by similarity to GB:BAC73250.1; hypothetical protein 616347..617036 Prevotella ruminicola 23 9000653 YP_003573894.1 CDS PRU_0522 NC_014033.1 617127 617225 D identified by glimmer; hypothetical protein 617127..617225 Prevotella ruminicola 23 9000853 YP_003573895.1 CDS PRU_0523 NC_014033.1 617861 619348 D identified by similarity to GB:AAK24734.1; match to protein family HMM PF07804; match to protein family HMM PF07805; HipA domain-containing protein 617861..619348 Prevotella ruminicola 23 9000910 YP_003573896.1 CDS PRU_0524 NC_014033.1 619469 621820 R identified by match to protein family HMM PF02018; match to protein family HMM PF06964; family 51 glycosyl hydrolase complement(619469..621820) Prevotella ruminicola 23 9001770 YP_003573897.1 CDS PRU_0525 NC_014033.1 622100 624706 D identified by similarity to SP:P82593; match to protein family HMM PF02018; match to protein family HMM PF06964; alpha-N-arabinofuranosidase 622100..624706 Prevotella ruminicola 23 9002548 YP_003573898.1 CDS PRU_0526 NC_014033.1 624831 625013 D identified by glimmer; hypothetical protein 624831..625013 Prevotella ruminicola 23 9000137 YP_003573899.1 CDS PRU_0527 NC_014033.1 625851 626738 D identified by glimmer; hypothetical protein 625851..626738 Prevotella ruminicola 23 9001264 YP_003573900.1 CDS PRU_0528 NC_014033.1 626771 627727 D identified by glimmer; hypothetical protein 626771..627727 Prevotella ruminicola 23 9001760 YP_003573901.1 CDS PRU_0529 NC_014033.1 627730 630687 D identified by glimmer; hypothetical protein 627730..630687 Prevotella ruminicola 23 9002507 YP_003573902.1 CDS PRU_0530 NC_014033.1 630731 631300 D identified by glimmer; hypothetical protein 630731..631300 Prevotella ruminicola 23 9000467 YP_003573903.1 CDS PRU_0531 NC_014033.1 631284 632828 D identified by similarity to GB:AAS12812.1; hypothetical protein 631284..632828 Prevotella ruminicola 23 9001098 YP_003573904.1 CDS PRU_0532 NC_014033.1 632872 634566 D identified by similarity to GB:AAS41125.1; match to protein family HMM PF07726; match to protein family HMM PF07728; overlaps another CDS with the same product name; hypothetical protein 632872..634566 Prevotella ruminicola 23 9002186 YP_003573905.1 CDS PRU_0533 NC_014033.1 634559 636394 D identified by similarity to PIR:AD2357; overlaps another CDS with the same product name; hypothetical protein 634559..636394 Prevotella ruminicola 23 9000568 YP_003573906.1 CDS PRU_0534 NC_014033.1 636767 638359 D identified by match to protein family HMM PF04326; divergent AAA domain-containing protein 636767..638359 Prevotella ruminicola 23 9001024 YP_003573907.1 CDS PRU_0535 NC_014033.1 638363 639346 D identified by similarity to GB:AAS71472.1; hypothetical protein 638363..639346 Prevotella ruminicola 23 9001883 YP_003573908.1 CDS PRU_0537 NC_014033.1 639777 640562 D identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486; NIF3 family protein 639777..640562 Prevotella ruminicola 23 9002820 YP_003573909.1 CDS PRU_0538 NC_014033.1 640675 641436 D identified by similarity to GB:AAM72604.1; match to protein family HMM PF02591; hypothetical protein 640675..641436 Prevotella ruminicola 23 9000926 YP_003573910.1 CDS PRU_0539 NC_014033.1 641446 641895 R identified by similarity to GB:AAQ66077.1; hypothetical protein complement(641446..641895) Prevotella ruminicola 23 9001758 YP_003573911.1 CDS holA NC_014033.1 641980 642972 D identified by match to protein family HMM PF06144; match to protein family HMM TIGR01128; DNA polymerase III subunit delta 641980..642972 Prevotella ruminicola 23 9002495 YP_003573912.1 CDS PRU_0541 NC_014033.1 643748 644236 D identified by match to protein family HMM PF01381; DNA-binding protein 643748..644236 Prevotella ruminicola 23 9002293 YP_003573913.1 CDS pyrK NC_014033.1 644321 645067 D identified by similarity to SP:P25983; match to protein family HMM PF00175; dihydroorotate oxidase, electron transfer subunit 644321..645067 Prevotella ruminicola 23 9000282 YP_003573914.1 CDS pyrD NC_014033.1 645055 645960 D identified by similarity to SP:P25996; match to protein family HMM PF01180; match to protein family HMM TIGR01037; dihydroorotate oxidase, catalytic subunit 645055..645960 Prevotella ruminicola 23 9000785 YP_003573915.1 CDS aroC NC_014033.1 646156 647241 R identified by similarity to SP:P23353; match to protein family HMM PF01264; match to protein family HMM TIGR00033; chorismate synthase complement(646156..647241) Prevotella ruminicola 23 9002027 YP_003573916.1 CDS PRU_0545 NC_014033.1 647267 647881 R identified by similarity to SP:P30856; peptidyl-prolyl cis-trans isomerase complement(647267..647881) Prevotella ruminicola 23 9002633 YP_003573917.1 CDS PRU_0546 NC_014033.1 648167 648529 D identified by similarity to GB:BAD50619.1; hypothetical protein 648167..648529 Prevotella ruminicola 23 9001434 YP_003573918.1 CDS PRU_0547 NC_014033.1 648682 649563 D identified by match to protein family HMM PF01435; M48 family peptidase 648682..649563 Prevotella ruminicola 23 9002241 YP_003573919.1 CDS pepC NC_014033.1 649655 650971 D identified by similarity to SP:Q56115; match to protein family HMM PF03051; bleomycin hydrolase 649655..650971 Prevotella ruminicola 23 9000104 YP_003573920.1 CDS PRU_0549 NC_014033.1 650964 651671 D identified by similarity to GB:AAO79601.1; match to protein family HMM PF00106; short chain dehydrogenase/reductase family oxidoreductase 650964..651671 Prevotella ruminicola 23 9000971 YP_003573921.1 CDS PRU_0550 NC_014033.1 651698 652144 D identified by similarity to GB:AAM44404.1; hypothetical protein 651698..652144 Prevotella ruminicola 23 9001596 YP_003573922.1 CDS ilvC NC_014033.1 652369 653409 D identified by match to protein family HMM PF01450; match to protein family HMM PF07991; match to protein family HMM TIGR00465; ketol-acid reductoisomerase 652369..653409 Prevotella ruminicola 23 9000346 YP_003573923.1 CDS PRU_0552 NC_014033.1 653464 653928 D identified by match to protein family HMM PF01575; MaoC domain-containing protein 653464..653928 Prevotella ruminicola 23 9002542 YP_003573924.1 CDS PRU_0553 NC_014033.1 653934 655385 D identified by similarity to PDB:1GPH_1; amidophosphoribosyltransferase 653934..655385 Prevotella ruminicola 23 9002249 YP_003573925.1 CDS PRU_0554 NC_014033.1 655387 657294 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM TIGR00614; RecQ family ATP-dependent DNA helicase complement(655387..657294) Prevotella ruminicola 23 9001635 YP_003573926.1 CDS recJ NC_014033.1 657310 659031 R identified by match to protein family HMM PF01368; match to protein family HMM PF02272; match to protein family HMM TIGR00644; single-stranded-DNA-specific exonuclease RecJ complement(657310..659031) Prevotella ruminicola 23 9000706 YP_003573927.1 CDS PRU_0556 NC_014033.1 659031 660236 R identified by similarity to GB:AAA25250.1; match to protein family HMM PF03051; C1 family peptidase complement(659031..660236) Prevotella ruminicola 23 9000080 YP_003573928.1 CDS PRU_0557 NC_014033.1 660256 661656 R identified by similarity to SP:P15034; match to protein family HMM PF00557; M24B subfamily peptidase complement(660256..661656) Prevotella ruminicola 23 9000972 YP_003573929.1 CDS trpS NC_014033.1 661819 662907 D identified by match to protein family HMM PF00579; match to protein family HMM TIGR00233; tryptophan--tRNA ligase 661819..662907 Prevotella ruminicola 23 9000196 YP_003573930.1 CDS PRU_0559 NC_014033.1 662945 664450 R identified by match to protein family HMM PF04055; Fe-S oxidoreductase complement(662945..664450) Prevotella ruminicola 23 9002492 YP_003573931.1 CDS PRU_0560 NC_014033.1 664447 666210 R identified by match to protein family HMM PF01554; MATE efflux protein complement(664447..666210) Prevotella ruminicola 23 9001431 YP_003573932.1 CDS PRU_0561 NC_014033.1 666197 667576 R identified by similarity to PIR:AE2541; match to protein family HMM PF02698; hypothetical protein complement(666197..667576) Prevotella ruminicola 23 9000362 YP_003573933.1 CDS PRU_0562 NC_014033.1 667563 668030 R identified by glimmer; hypothetical protein complement(667563..668030) Prevotella ruminicola 23 9002698 YP_003573934.1 CDS trmD NC_014033.1 668431 669111 R identified by match to protein family HMM PF01746; match to protein family HMM TIGR00088; tRNA (guanine-N(1)-)-methyltransferase complement(668431..669111) Prevotella ruminicola 23 9001945 YP_003573935.1 CDS PRU_0565 NC_014033.1 669108 669953 R identified by match to protein family HMM PF01734; phospholipase complement(669108..669953) Prevotella ruminicola 23 9000136 YP_003573936.1 CDS PRU_0566 NC_014033.1 670112 671065 D identified by glimmer; hypothetical protein 670112..671065 Prevotella ruminicola 23 9000141 YP_003573937.1 CDS ligA NC_014033.1 671062 673086 R identified by similarity to SP:O87703; match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575; DNA ligase (NAD(+)) complement(671062..673086) Prevotella ruminicola 23 9002235 YP_003573938.1 CDS PRU_0569 NC_014033.1 673657 674568 D identified by match to protein family HMM PF00892; match to protein family HMM PF03151; hypothetical protein 673657..674568 Prevotella ruminicola 23 9001660 YP_003573939.1 CDS PRU_0570 NC_014033.1 674822 675031 R DNA-binding protein complement(674822..675031) Prevotella ruminicola 23 9002312 YP_003573940.1 CDS PRU_0571 NC_014033.1 675036 675500 R identified by similarity to GB:AAO77652.1; lipoprotein complement(675036..675500) Prevotella ruminicola 23 9002334 YP_003573941.1 CDS PRU_0572 NC_014033.1 675626 676489 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(675626..676489) Prevotella ruminicola 23 9000740 YP_003573942.1 CDS PRU_0573 NC_014033.1 676489 677883 R identified by similarity to GB:AAN25509.1; match to protein family HMM PF01871; match to protein family HMM PF01875; match to protein family HMM TIGR00296; hypothetical protein complement(676489..677883) Prevotella ruminicola 23 9001372 YP_003573943.1 CDS PRU_0574 NC_014033.1 678080 678544 R identified by similarity to GB:AAO79094.1; hypothetical protein complement(678080..678544) Prevotella ruminicola 23 9002699 YP_003573944.1 CDS PRU_0575 NC_014033.1 678647 679858 R identified by similarity to GB:AAO79335.1; hypothetical protein complement(678647..679858) Prevotella ruminicola 23 9002518 YP_003573945.1 CDS PRU_0576 NC_014033.1 680252 680545 D identified by match to protein family HMM PF01909; nucleotidyltransferase 680252..680545 Prevotella ruminicola 23 9000445 YP_003573946.1 CDS PRU_0577 NC_014033.1 680526 680915 D identified by similarity to GB:AAO77317.1; match to protein family HMM PF01934; hypothetical protein 680526..680915 Prevotella ruminicola 23 9000204 YP_003573947.1 CDS PRU_0578 NC_014033.1 681144 682784 R identified by similarity to GB:CAG22001.1; hypothetical protein complement(681144..682784) Prevotella ruminicola 23 9000928 YP_003573948.1 CDS PRU_0579 NC_014033.1 683100 683519 D identified by glimmer; hypothetical protein 683100..683519 Prevotella ruminicola 23 9002349 YP_003573949.1 CDS PRU_0580 NC_014033.1 683600 685288 D identified by glimmer; hypothetical protein 683600..685288 Prevotella ruminicola 23 9000487 YP_003573950.1 CDS xpt NC_014033.1 685510 686088 R identified by similarity to SP:P42085; match to protein family HMM PF00156; match to protein family HMM TIGR01744; xanthine phosphoribosyltransferase complement(685510..686088) Prevotella ruminicola 23 9001097 YP_003573951.1 CDS pheS NC_014033.1 686136 687194 R identified by match to protein family HMM PF01409; match to protein family HMM PF02912; match to protein family HMM TIGR00468; phenylalanyl-tRNA synthetase subunit alpha complement(686136..687194) Prevotella ruminicola 23 9001623 YP_003573952.1 CDS PRU_0583 NC_014033.1 687361 688200 D identified by similarity to GB:BAD49734.1; lipoprotein 687361..688200 Prevotella ruminicola 23 9001359 YP_003573953.1 CDS murB NC_014033.1 688234 689235 D identified by similarity to SP:P08373; match to protein family HMM PF01565; match to protein family HMM PF02873; match to protein family HMM TIGR00179; UDP-N-acetylmuramate dehydrogenase 688234..689235 Prevotella ruminicola 23 9000700 YP_003573954.1 CDS PRU_0585 NC_014033.1 689232 689993 D identified by similarity to SP:P16692; match to protein family HMM PF00753; phnP protein 689232..689993 Prevotella ruminicola 23 9001589 YP_003573955.1 CDS PRU_0586 NC_014033.1 690160 690444 R identified by similarity to GB:AAO75513.1; hypothetical protein complement(690160..690444) Prevotella ruminicola 23 9002369 YP_003573956.1 CDS PRU_0587 NC_014033.1 690450 690800 R identified by similarity to GB:AAO75514.1; hypothetical protein complement(690450..690800) Prevotella ruminicola 23 9000418 YP_003573957.1 CDS PRU_0588 NC_014033.1 690804 691019 R identified by similarity to GB:AAO75515.1; hypothetical protein complement(690804..691019) Prevotella ruminicola 23 9001140 YP_003573958.1 CDS PRU_0589 NC_014033.1 691286 691744 D identified by match to protein family HMM PF05036; sporulation-like repeat protein 691286..691744 Prevotella ruminicola 23 9002310 YP_003573959.1 CDS PRU_0590 NC_014033.1 691754 692167 D identified by similarity to GB:AAQ67144.1; match to protein family HMM PF03652; match to protein family HMM TIGR00250; hypothetical protein 691754..692167 Prevotella ruminicola 23 9000309 YP_003573960.1 CDS def NC_014033.1 692194 692754 D identified by similarity to SP:P43522; match to protein family HMM PF01327; match to protein family HMM TIGR00079; peptide deformylase 692194..692754 Prevotella ruminicola 23 9000808 YP_003573961.1 CDS PRU_0592 NC_014033.1 692757 694706 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 692757..694706 Prevotella ruminicola 23 9001611 YP_003573962.1 CDS thrS NC_014033.1 694789 696735 D identified by similarity to SP:P18255; match to protein family HMM PF00587; match to protein family HMM PF02824; match to protein family HMM PF03129; match to protein family HMM PF07973; match to protein family HMM TIGR00418; threonine--tRNA ligase 694789..696735 Prevotella ruminicola 23 9001893 YP_003573963.1 CDS infC NC_014033.1 696835 697542 D identified by similarity to SP:P48516; match to protein family HMM PF00707; match to protein family HMM PF05198; match to protein family HMM TIGR00168; translation initiation factor IF-3 696835..697542 Prevotella ruminicola 23 9002665 YP_003573964.1 CDS rpmI NC_014033.1 697622 697819 D identified by similarity to SP:P55874; match to protein family HMM PF01632; match to protein family HMM TIGR00001; 50S ribosomal protein L35 697622..697819 Prevotella ruminicola 23 9000369 YP_003573965.1 CDS rplT NC_014033.1 697854 698198 D identified by match to protein family HMM PF00453; match to protein family HMM TIGR01032; 50S ribosomal protein L20 697854..698198 Prevotella ruminicola 23 9001171 YP_003573966.1 CDS PRU_0597 NC_014033.1 698261 698569 R identified by match to protein family HMM PF01740; anti-anti-sigma factor complement(698261..698569) Prevotella ruminicola 23 9001373 YP_003573967.1 CDS PRU_0598 NC_014033.1 698591 700768 R identified by match to protein family HMM PF02743; match to protein family HMM PF07228; cache/SpoIIE domain-containing protein complement(698591..700768) Prevotella ruminicola 23 9002146 YP_003573968.1 CDS PRU_0599 NC_014033.1 701022 701657 D identified by similarity to GB:BAD50545.1; hypothetical protein 701022..701657 Prevotella ruminicola 23 9001129 YP_003573969.1 CDS PRU_0600 NC_014033.1 701688 703883 R identified by match to protein family HMM PF00575; match to protein family HMM PF09371; S1 RNA binding domain-containing protein complement(701688..703883) Prevotella ruminicola 23 9000957 YP_003573970.1 CDS PRU_0601 NC_014033.1 703964 704593 D identified by similarity to PIR:JH0205; hypothetical protein 703964..704593 Prevotella ruminicola 23 9002674 YP_003573971.1 CDS PRU_0602 NC_014033.1 704590 706578 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 704590..706578 Prevotella ruminicola 23 9001924 YP_003573972.1 CDS pepO_1 NC_014033.1 706592 708625 D identified by similarity to GB:BAA24495.1; match to protein family HMM PF01431; match to protein family HMM PF05649; endopeptidase PepO 706592..708625 Prevotella ruminicola 23 9001432 YP_003573973.1 CDS PRU_0604 NC_014033.1 708744 709667 D identified by similarity to SP:Q9GKS9; hypothetical protein 708744..709667 Prevotella ruminicola 23 9001329 YP_003573974.1 CDS PRU_0605 NC_014033.1 709832 713119 D protein kinase domain-containing protein 709832..713119 Prevotella ruminicola 23 9000150 YP_003573975.1 CDS PRU_0606 NC_014033.1 713240 716431 D identified by match to protein family HMM PF00004; AAA family ATPase 713240..716431 Prevotella ruminicola 23 9002212 YP_003573976.1 CDS PRU_0607 NC_014033.1 716573 717220 D identified by match to protein family HMM PF00498; regulatory protein 716573..717220 Prevotella ruminicola 23 9001591 YP_003573977.1 CDS PRU_0608 NC_014033.1 717251 717979 D identified by similarity to GB:AAF81068.1; match to protein family HMM PF00481; protein phosphatase 1 717251..717979 Prevotella ruminicola 23 9002039 YP_003573978.1 CDS metA NC_014033.1 718001 718918 D identified by match to protein family HMM PF04204; match to protein family HMM TIGR01001; homoserine O-succinyltransferase 718001..718918 Prevotella ruminicola 23 9002432 YP_003573979.1 CDS PRU_0610 NC_014033.1 718924 720708 D identified by match to protein family HMM PF01136; U32 family peptidase 718924..720708 Prevotella ruminicola 23 9000423 YP_003573980.1 CDS PRU_0611 NC_014033.1 720692 721624 D identified by similarity to GB:AAO77518.1; lipoprotein 720692..721624 Prevotella ruminicola 23 9000184 YP_003573981.1 CDS PRU_0612 NC_014033.1 721621 722748 R identified by similarity to SP:P54304; match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00539; oxygen-independent coproporphyrinogen III oxidase complement(721621..722748) Prevotella ruminicola 23 9001556 YP_003573982.1 CDS PRU_0613 NC_014033.1 722876 725035 D identified by similarity to SP:P13551; match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231; translation elongation factor G 722876..725035 Prevotella ruminicola 23 9002328 YP_003573983.1 CDS rprX NC_014033.1 725220 726782 D identified by similarity to SP:Q08408; match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase RprX 725220..726782 Prevotella ruminicola 23 9000127 YP_003573984.1 CDS rprY NC_014033.1 726835 727539 D identified by similarity to PIR:S33662; match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding repsonse regulator RprY 726835..727539 Prevotella ruminicola 23 9000749 YP_003573985.1 CDS rpsF NC_014033.1 727849 728193 D identified by match to protein family HMM PF01250; match to protein family HMM TIGR00166; 30S ribosomal protein S6 727849..728193 Prevotella ruminicola 23 9000823 YP_003573986.1 CDS rpsR NC_014033.1 728197 728463 D identified by similarity to SP:P21475; match to protein family HMM PF01084; match to protein family HMM TIGR00165; 30S ribosomal protein S18 728197..728463 Prevotella ruminicola 23 9000554 YP_003573987.1 CDS rpL9 NC_014033.1 728486 729076 D identified by similarity to SP:P02418; match to protein family HMM PF01281; match to protein family HMM PF03948; match to protein family HMM TIGR00158; 50S ribosomal protein L9 728486..729076 Prevotella ruminicola 23 9001759 YP_003573988.1 CDS PRU_0619 NC_014033.1 729134 729322 D identified by glimmer; hypothetical protein 729134..729322 Prevotella ruminicola 23 9001317 YP_003573989.1 CDS PRU_0620 NC_014033.1 729357 729920 D identified by match to protein family HMM PF00486; transcriptional regulator 729357..729920 Prevotella ruminicola 23 9000563 YP_003573990.1 CDS PRU_0621 NC_014033.1 730041 730535 D identified by match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; ECF family RNA polymerase sigma-70 factor 730041..730535 Prevotella ruminicola 23 9001529 YP_003573991.1 CDS PRU_0622 NC_014033.1 730532 731191 D identified by similarity to GB:AAO75432.1; hypothetical protein 730532..731191 Prevotella ruminicola 23 9000279 YP_003573992.1 CDS PRU_0623 NC_014033.1 731181 732146 D identified by glimmer; hypothetical protein 731181..732146 Prevotella ruminicola 23 9001297 YP_003573993.1 CDS PRU_0625 NC_014033.1 732854 735163 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane receptor (OMR) family transporter 732854..735163 Prevotella ruminicola 23 9001205 YP_003573994.1 CDS PRU_0626 NC_014033.1 735181 735681 R identified by glimmer; hypothetical protein complement(735181..735681) Prevotella ruminicola 23 9002123 YP_003573995.1 CDS PRU_0627 NC_014033.1 735681 736616 R identified by similarity to GB:AAO79421.1; hypothetical protein complement(735681..736616) Prevotella ruminicola 23 9002588 YP_003573996.1 CDS PRU_0628 NC_014033.1 736785 736955 R identified by similarity to GB:AAO77262.1; lipoprotein complement(736785..736955) Prevotella ruminicola 23 9001627 YP_003573997.1 CDS PRU_0629 NC_014033.1 737160 738548 D identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01579; MiaB family RNA modification enzyme 737160..738548 Prevotella ruminicola 23 9001031 YP_003573998.1 CDS PRU_0630 NC_014033.1 738566 739588 D identified by match to protein family HMM PF00535; group 2 family glycosyltransferase 738566..739588 Prevotella ruminicola 23 9000897 YP_003573999.1 CDS PRU_0631 NC_014033.1 739589 740830 R identified by similarity to GB:AAO79291.1; hypothetical protein complement(739589..740830) Prevotella ruminicola 23 9000252 YP_003574000.1 CDS PRU_0632 NC_014033.1 741047 741850 D identified by similarity to GB:AAO79294.1; lipoprotein 741047..741850 Prevotella ruminicola 23 9002122 YP_003574001.1 CDS PRU_0633 NC_014033.1 741823 742764 R identified by match to protein family HMM PF04055; match to protein family HMM TIGR01212; Fe-S oxidoreductase, TIGR01212 family complement(741823..742764) Prevotella ruminicola 23 9001476 YP_003574002.1 CDS PRU_0634 NC_014033.1 742830 745040 D identified by similarity to GB:BAA28265.1; match to protein family HMM PF00326; match to protein family HMM PF00930; match to protein family HMM PF02129; dipeptidyl-peptidase IV 742830..745040 Prevotella ruminicola 23 9000868 YP_003574003.1 CDS glyA NC_014033.1 745083 746363 R identified by similarity to SP:P00477; match to protein family HMM PF00464; match to protein family HMM PF01212; glycine hydroxymethyltransferase complement(745083..746363) Prevotella ruminicola 23 9002470 YP_003574004.1 CDS pyrI NC_014033.1 746415 746861 R identified by match to protein family HMM PF01948; match to protein family HMM PF02748; aspartate carbamoyltransferase regulatory subunit complement(746415..746861) Prevotella ruminicola 23 9002106 YP_003574005.1 CDS pyrB NC_014033.1 746888 747835 R identified by similarity to SP:P00479; match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670; aspartate carbamoyltransferase complement(746888..747835) Prevotella ruminicola 23 9002438 YP_003574006.1 CDS PRU_0638 NC_014033.1 747943 750267 D identified by similarity to SP:P02918; match to protein family HMM PF00905; match to protein family HMM PF00912; penicillin-binding protein 1A 747943..750267 Prevotella ruminicola 23 9001220 YP_003574007.1 CDS PRU_0644 NC_014033.1 756214 756753 R identified by similarity to GB:AAO79137.1; hypothetical protein complement(756214..756753) Prevotella ruminicola 23 9002761 YP_003574008.1 CDS PRU_0645 NC_014033.1 757451 758713 D identified by glimmer; hypothetical protein 757451..758713 Prevotella ruminicola 23 9002198 YP_003574009.1 CDS PRU_0646 NC_014033.1 758940 759620 D identified by match to protein family HMM PF04542; RNA polymerase sigma-70 factor family protein 758940..759620 Prevotella ruminicola 23 9000600 YP_003574010.1 CDS PRU_0647 NC_014033.1 759634 759915 D identified by glimmer; hypothetical protein 759634..759915 Prevotella ruminicola 23 9000976 YP_003574011.1 CDS PRU_0648 NC_014033.1 759942 760310 D identified by similarity to PIR:AC2682; hypothetical protein 759942..760310 Prevotella ruminicola 23 9001616 YP_003574012.1 CDS PRU_0649 NC_014033.1 760307 762652 D identified by glimmer; hypothetical protein 760307..762652 Prevotella ruminicola 23 9001845 YP_003574013.1 CDS PRU_0650 NC_014033.1 762686 763117 D identified by similarity to GB:AAS95986.1; hypothetical protein 762686..763117 Prevotella ruminicola 23 9002568 YP_003574014.1 CDS PRU_0651 NC_014033.1 763184 764308 R identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein complement(763184..764308) Prevotella ruminicola 23 9000652 YP_003574015.1 CDS PRU_0652 NC_014033.1 764323 764583 D identified by glimmer; hypothetical protein 764323..764583 Prevotella ruminicola 23 9001062 YP_003574016.1 CDS PRU_0653 NC_014033.1 764674 765087 R identified by glimmer; hypothetical protein complement(764674..765087) Prevotella ruminicola 23 9001586 YP_003574017.1 CDS PRU_0654 NC_014033.1 765478 767532 R identified by glimmer; hypothetical protein complement(765478..767532) Prevotella ruminicola 23 9002377 YP_003574018.1 CDS PRU_0655 NC_014033.1 767940 768368 D identified by match to protein family HMM PF03061; thioesterase family protein 767940..768368 Prevotella ruminicola 23 8999964 YP_003574019.1 CDS PRU_0656 NC_014033.1 769022 770197 D identified by match to protein family HMM PF00933; family 3 glycosyl hydrolase 769022..770197 Prevotella ruminicola 23 9001481 YP_003574020.1 CDS PRU_0657 NC_014033.1 770433 772409 D identified by glimmer; hypothetical protein 770433..772409 Prevotella ruminicola 23 9002060 YP_003574021.1 CDS PRU_0658 NC_014033.1 772754 773668 D identified by match to protein family HMM PF04960; match to protein family HMM TIGR03814; glutaminase 772754..773668 Prevotella ruminicola 23 9000206 YP_003574022.1 CDS PRU_0659 NC_014033.1 773670 775301 R identified by match to protein family HMM PF02080; match to protein family HMM PF06826; match to protein family HMM TIGR01625; permease complement(773670..775301) Prevotella ruminicola 23 9000578 YP_003574023.1 CDS PRU_0661 NC_014033.1 775797 777572 R identified by glimmer; hypothetical protein complement(775797..777572) Prevotella ruminicola 23 9001194 YP_003574024.1 CDS mutT_1 NC_014033.1 778050 778436 D identified by match to protein family HMM PF00293; mutator mutT protein 778050..778436 Prevotella ruminicola 23 9002085 YP_003574025.1 CDS mutT_2 NC_014033.1 780048 780437 D identified by match to protein family HMM PF00293; mutator mutT protein 780048..780437 Prevotella ruminicola 23 9000172 YP_003574026.1 CDS PRU_0665 NC_014033.1 781264 782370 D identified by similarity to SP:P25261; match to protein family HMM PF09519; type II restriction endonuclease 781264..782370 Prevotella ruminicola 23 9000285 YP_003574027.1 CDS PRU_0666 NC_014033.1 782367 783713 D identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675; C-5 cytosine-specific family DNA methylase 782367..783713 Prevotella ruminicola 23 9000683 YP_003574028.1 CDS PRU_0667 NC_014033.1 783720 784328 D identified by similarity to GB:AAQ17981.1; hypothetical protein 783720..784328 Prevotella ruminicola 23 9001467 YP_003574029.1 CDS PRU_0668 NC_014033.1 784512 785339 D identified by similarity to GB:CAG73347.1; hypothetical protein 784512..785339 Prevotella ruminicola 23 9002593 YP_003574030.1 CDS PRU_0670 NC_014033.1 787001 788713 D identified by match to protein family HMM PF05693; glycogen synthase family protein 787001..788713 Prevotella ruminicola 23 9000741 YP_003574031.1 CDS malP NC_014033.1 788787 791366 D identified by similarity to GB:AAD28735.1; match to protein family HMM PF00343; match to protein family HMM TIGR02094; maltodextrin phosphorylase 788787..791366 Prevotella ruminicola 23 9001679 YP_003574032.1 CDS PRU_0672 NC_014033.1 791401 791973 R identified by similarity to GB:AAQ66661.1; thioredoxin domain-containing protein complement(791401..791973) Prevotella ruminicola 23 9001123 YP_003574033.1 CDS prs NC_014033.1 791973 792911 R identified by similarity to SP:P42816; match to protein family HMM PF00156; match to protein family HMM TIGR01251; ribose-phosphate pyrophosphokinase complement(791973..792911) Prevotella ruminicola 23 9000605 YP_003574034.1 CDS PRU_0674 NC_014033.1 792954 793562 R identified by similarity to GB:AAO75754.1; thiamine-phosphate pyrophosphorylase-like protein complement(792954..793562) Prevotella ruminicola 23 9000202 YP_003574035.1 CDS fabD NC_014033.1 793766 794656 D identified by match to protein family HMM PF00698; match to protein family HMM TIGR00128; [acyl-carrier-protein] S-malonyltransferase 793766..794656 Prevotella ruminicola 23 9000387 YP_003574036.1 CDS PRU_0676 NC_014033.1 794683 796341 D identified by match to protein family HMM PF00128; alpha-amylase family protein 794683..796341 Prevotella ruminicola 23 9001125 YP_003574037.1 CDS PRU_0677 NC_014033.1 796545 797216 R identified by similarity to GB:AAQ66127.1; lipoprotein complement(796545..797216) Prevotella ruminicola 23 9000373 YP_003574038.1 CDS PRU_0678 NC_014033.1 797331 797798 D identified by similarity to PDB:1V7O_A; match to protein family HMM PF07973; class-II aminoacyl-tRNA synthetase family 797331..797798 Prevotella ruminicola 23 9002678 YP_003574039.1 CDS PRU_0679 NC_014033.1 797837 798913 R identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein complement(797837..798913) Prevotella ruminicola 23 9001935 YP_003574040.1 CDS PRU_0680 NC_014033.1 798950 800179 R identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase/response regulator complement(798950..800179) Prevotella ruminicola 23 9000117 YP_003574041.1 CDS PRU_0681 NC_014033.1 800291 801475 R identified by match to protein family HMM PF00535; group 2 family glycosyltransferase complement(800291..801475) Prevotella ruminicola 23 9002070 YP_003574042.1 CDS PRU_0682 NC_014033.1 801499 803073 R identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757; ribonuclease, Rne/Rng family complement(801499..803073) Prevotella ruminicola 23 9001665 YP_003574043.1 CDS PRU_0683 NC_014033.1 803330 803605 R identified by match to protein family HMM PF00216; HU family DNA-binding protein complement(803330..803605) Prevotella ruminicola 23 9000862 YP_003574044.1 CDS pyk NC_014033.1 803800 805245 D identified by similarity to SP:P14178; match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; pyruvate kinase 803800..805245 Prevotella ruminicola 23 9000311 YP_003574045.1 CDS dcp NC_014033.1 805318 807360 D identified by similarity to SP:P24171; match to protein family HMM PF01432; peptidyl-dipeptidase Dcp 805318..807360 Prevotella ruminicola 23 9001978 YP_003574046.1 CDS PRU_0686 NC_014033.1 807490 808191 D identified by similarity to GB:BAB80939.1; hypothetical protein 807490..808191 Prevotella ruminicola 23 9001550 YP_003574047.1 CDS PRU_0687 NC_014033.1 808207 809223 D identified by similarity to GB:BAB80938.1; hypothetical protein 808207..809223 Prevotella ruminicola 23 9002325 YP_003574048.1 CDS PRU_0688 NC_014033.1 809308 809838 R identified by glimmer; hypothetical protein complement(809308..809838) Prevotella ruminicola 23 9000044 YP_003574049.1 CDS hprA NC_014033.1 809960 810859 D identified by similarity to SP:Q59516; match to protein family HMM PF00389; match to protein family HMM PF02826; glycerate dehydrogenase 809960..810859 Prevotella ruminicola 23 9000796 YP_003574050.1 CDS PRU_0690 NC_014033.1 810856 811161 R identified by similarity to GB:AAL95032.1; match to protein family HMM PF07876; alpha/beta barrel domain-containing protein complement(810856..811161) Prevotella ruminicola 23 9001537 YP_003574051.1 CDS PRU_0691 NC_014033.1 811298 812995 D identified by match to protein family HMM PF00005; match to protein family HMM TIGR03719; ABC transporter ATP-binding protein 811298..812995 Prevotella ruminicola 23 9002316 YP_003574052.1 CDS PRU_0692 NC_014033.1 813025 815310 D identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; family 2 glycosyl hydrolase 813025..815310 Prevotella ruminicola 23 9000641 YP_003574053.1 CDS lacZ NC_014033.1 815312 818125 D identified by similarity to SP:P00722; match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; match to protein family HMM PF02929; beta-galactosidase 815312..818125 Prevotella ruminicola 23 9000710 YP_003574054.1 CDS uraA NC_014033.1 818670 819947 D identified by similarity to SP:P33780; match to protein family HMM PF00860; match to protein family HMM TIGR00801; uracil permease 818670..819947 Prevotella ruminicola 23 9001762 YP_003574055.1 CDS trmE NC_014033.1 819958 821304 R identified by match to protein family HMM PF00071; match to protein family HMM PF01926; match to protein family HMM PF08477; match to protein family HMM TIGR00231; match to protein family HMM TIGR00450; tRNA modification GTPase TrmE complement(819958..821304) Prevotella ruminicola 23 9000405 YP_003574056.1 CDS PRU_0696 NC_014033.1 821332 822204 R identified by match to protein family HMM PF01048; phosphorylase family protein complement(821332..822204) Prevotella ruminicola 23 9000703 YP_003574057.1 CDS PRU_0697 NC_014033.1 822217 823293 R identified by similarity to GB:BAD47928.1; match to protein family HMM PF07676; hypothetical protein complement(822217..823293) Prevotella ruminicola 23 9001278 YP_003574058.1 CDS PRU_0698 NC_014033.1 823351 824130 R identified by match to protein family HMM PF01171; PP-loop family protein complement(823351..824130) Prevotella ruminicola 23 9002139 YP_003574059.1 CDS gltA_1 NC_014033.1 824117 826477 R identified by match to protein family HMM PF00070; match to protein family HMM PF00175; match to protein family HMM PF07992; match to protein family HMM TIGR01316; glutamate synthase complement(824117..826477) Prevotella ruminicola 23 9000050 YP_003574060.1 CDS serS NC_014033.1 826498 827817 R identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414; serine--tRNA ligase complement(826498..827817) Prevotella ruminicola 23 9000115 YP_003574061.1 CDS rpmA NC_014033.1 827984 828247 R identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; 50S ribosomal protein L27 complement(827984..828247) Prevotella ruminicola 23 9002155 YP_003574062.1 CDS rplU NC_014033.1 828269 828586 R identified by similarity to SP:P26908; match to protein family HMM PF00829; match to protein family HMM TIGR00061; 50S ribosomal protein L21 complement(828269..828586) Prevotella ruminicola 23 9001229 YP_003574063.1 CDS PRU_0703 NC_014033.1 829046 830800 R identified by similarity to GB:AAQ67011.1; match to protein family HMM PF07719; hypothetical protein complement(829046..830800) Prevotella ruminicola 23 9000577 YP_003574064.1 CDS PRU_0704 NC_014033.1 830824 833178 R identified by similarity to SP:P02918; match to protein family HMM PF00905; match to protein family HMM PF00912; penicillin-binding protein 1A complement(830824..833178) Prevotella ruminicola 23 9000408 YP_003574065.1 CDS miaA_1 NC_014033.1 833303 834223 R identified by match to protein family HMM PF01715; match to protein family HMM TIGR00174; tRNA isopentenyltransferase complement(833303..834223) Prevotella ruminicola 23 9000071 YP_003574066.1 CDS lpxA NC_014033.1 834210 834983 R identified by similarity to SP:P10440; match to protein family HMM PF00132; match to protein family HMM TIGR01852; acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase complement(834210..834983) Prevotella ruminicola 23 9001245 YP_003574067.1 CDS PRU_0707 NC_014033.1 835004 836386 R gene_syms: lpxC and fabZ; identified by similarity to SP:P47205; match to protein family HMM PF03331; match to protein family HMM PF07977; match to protein family HMM TIGR00325; match to protein family HMM TIGR01750; UDP-3-0-acyl N-acetylglucosamine deacetylase/beta-hydroxyacyl-(acyl-carrier-protein) dehydratase complement(835004..836386) Prevotella ruminicola 23 9000603 YP_003574068.1 CDS lpxD NC_014033.1 836420 837463 R identified by similarity to GB:AAC45422.1; match to protein family HMM PF00132; match to protein family HMM PF04613; match to protein family HMM TIGR01853; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase complement(836420..837463) Prevotella ruminicola 23 9002462 YP_003574069.1 CDS PRU_0709 NC_014033.1 837501 838730 R identified by match to protein family HMM PF01966; HD domain-containing protein complement(837501..838730) Prevotella ruminicola 23 9001819 YP_003574070.1 CDS pyrF NC_014033.1 838760 839623 R identified by similarity to GB:AAF36353.1; match to protein family HMM PF00215; match to protein family HMM TIGR02127; orotidine 5'-phosphate decarboxylase complement(838760..839623) Prevotella ruminicola 23 9000844 YP_003574071.1 CDS prfA NC_014033.1 839661 840776 R identified by match to protein family HMM PF00472; match to protein family HMM PF03462; peptide chain release factor 1 complement(839661..840776) Prevotella ruminicola 23 9000275 YP_003574072.1 CDS PRU_0712 NC_014033.1 840852 842954 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 840852..842954 Prevotella ruminicola 23 9000859 YP_003574073.1 CDS PRU_0714 NC_014033.1 843459 845675 D identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412; peptide ABC transporter permease/ATP-binding protein 843459..845675 Prevotella ruminicola 23 9001902 YP_003574074.1 CDS PRU_0715 NC_014033.1 845685 846968 D identified by similarity to SP:P16534; toxin secretion protein 845685..846968 Prevotella ruminicola 23 9002644 YP_003574075.1 CDS PRU_0716 NC_014033.1 847134 847688 R identified by similarity to GB:AAO76747.1; hypothetical protein complement(847134..847688) Prevotella ruminicola 23 9001374 YP_003574076.1 CDS PRU_0717 NC_014033.1 848678 849559 D identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein 848678..849559 Prevotella ruminicola 23 9000973 YP_003574077.1 CDS PRU_0718 NC_014033.1 849638 850252 D identified by glimmer; hypothetical protein 849638..850252 Prevotella ruminicola 23 9002393 YP_003574078.1 CDS PRU_0719 NC_014033.1 850557 850724 D identified by glimmer; hypothetical protein 850557..850724 Prevotella ruminicola 23 9001536 YP_003574079.1 CDS PRU_0720 NC_014033.1 851835 853001 R identified by similarity to SP:Q05728; match to protein family HMM PF02769; phosphoribosylformylglycinamidine cyclo-ligase complement(851835..853001) Prevotella ruminicola 23 9001580 YP_003574080.1 CDS PRU_0721 NC_014033.1 853010 853756 R identified by similarity to SP:P54374; match to protein family HMM PF01488; match to protein family HMM PF08501; shikimate dehydrogenase complement(853010..853756) Prevotella ruminicola 23 9001881 YP_003574081.1 CDS ubiE NC_014033.1 853768 854499 R identified by similarity to SP:P27851; match to protein family HMM PF01209; match to protein family HMM PF08241; match to protein family HMM PF08242; match to protein family HMM TIGR01934; ubiquinone/menaquinone biosynthesis methyltransferase complement(853768..854499) Prevotella ruminicola 23 9001299 YP_003574082.1 CDS purC NC_014033.1 854527 855483 R identified by match to protein family HMM PF01259; phosphoribosylaminoimidazolesuccinocarboxamide synthase complement(854527..855483) Prevotella ruminicola 23 9001953 YP_003574083.1 CDS PRU_0724 NC_014033.1 855518 856507 R identified by match to protein family HMM PF02562; PhoH family protein complement(855518..856507) Prevotella ruminicola 23 9001782 YP_003574084.1 CDS PRU_0725 NC_014033.1 856594 857313 D identified by similarity to GB:AAO79324.1; hypothetical protein 856594..857313 Prevotella ruminicola 23 9000780 YP_003574085.1 CDS PRU_0726 NC_014033.1 857386 858267 D identified by match to protein family HMM PF04228; hypothetical protein 857386..858267 Prevotella ruminicola 23 9000277 YP_003574086.1 CDS PRU_0727 NC_014033.1 858268 858738 R identified by similarity to SP:Q8A7G2; match to protein family HMM PF02590; hypothetical protein complement(858268..858738) Prevotella ruminicola 23 9002661 YP_003574087.1 CDS PRU_0728 NC_014033.1 858769 860085 R identified by match to protein family HMM PF01183; match to protein family HMM PF02493; family 25 glycosyl hydrolase complement(858769..860085) Prevotella ruminicola 23 9001416 YP_003574088.1 CDS leuA NC_014033.1 860515 862017 D identified by similarity to SP:P09151; match to protein family HMM PF00682; match to protein family HMM PF08502; match to protein family HMM TIGR00973; 2-isopropylmalate synthase 860515..862017 Prevotella ruminicola 23 9000860 YP_003574089.1 CDS leuC NC_014033.1 862020 863414 D identified by match to protein family HMM PF00330; match to protein family HMM TIGR00170; 3-isopropylmalate dehydratase large subunit 862020..863414 Prevotella ruminicola 23 9000047 YP_003574090.1 CDS leuD NC_014033.1 863500 864096 D identified by match to protein family HMM PF00694; match to protein family HMM TIGR00171; 3-isopropylmalate dehydratase small subunit 863500..864096 Prevotella ruminicola 23 9000331 YP_003574091.1 CDS PRU_0732 NC_014033.1 864132 865649 D identified by similarity to SP:Q58787; match to protein family HMM PF00682; match to protein family HMM PF08502; (R)-citramalate synthase 864132..865649 Prevotella ruminicola 23 9001674 YP_003574092.1 CDS leuB NC_014033.1 865671 866732 D identified by similarity to SP:P05645; match to protein family HMM PF00180; match to protein family HMM TIGR00169; 3-isopropylmalate dehydrogenase 865671..866732 Prevotella ruminicola 23 9001900 YP_003574093.1 CDS PRU_0734 NC_014033.1 866740 867393 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 866740..867393 Prevotella ruminicola 23 9002734 YP_003574094.1 CDS PRU_0735 NC_014033.1 867449 869035 R identified by match to protein family HMM PF01232; match to protein family HMM PF08125; mannitol dehydrogenase family protein complement(867449..869035) Prevotella ruminicola 23 9002362 YP_003574095.1 CDS uxuA NC_014033.1 869045 870298 R identified by similarity to SP:P24215; match to protein family HMM PF03786; match to protein family HMM TIGR00695; mannonate dehydratase complement(869045..870298) Prevotella ruminicola 23 9001478 YP_003574096.1 CDS PRU_0737 NC_014033.1 870381 871847 R identified by similarity to GB:AAO76851.1; match to protein family HMM PF02638; hypothetical protein complement(870381..871847) Prevotella ruminicola 23 9001158 YP_003574097.1 CDS PRU_0738 NC_014033.1 871957 873417 D identified by similarity to SP:P15078; match to protein family HMM PF02554; carbon starvation protein A 871957..873417 Prevotella ruminicola 23 9000258 YP_003574098.1 CDS PRU_0739 NC_014033.1 873417 873920 D identified by similarity to GB:AAO76847.1; hypothetical protein 873417..873920 Prevotella ruminicola 23 9000323 YP_003574099.1 CDS nadC NC_014033.1 873966 874817 D identified by match to protein family HMM PF01729; match to protein family HMM PF02749; match to protein family HMM TIGR00078; nicotinate-nucleotide diphosphorylase 873966..874817 Prevotella ruminicola 23 9000920 YP_003574100.1 CDS PRU_0741 NC_014033.1 874834 876558 D identified by match to protein family HMM PF03577; dipeptidase 874834..876558 Prevotella ruminicola 23 9001548 YP_003574101.1 CDS PRU_0742 NC_014033.1 876555 877199 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; HAD-superfamily hydrolase 876555..877199 Prevotella ruminicola 23 9002180 YP_003574102.1 CDS PRU_0743 NC_014033.1 877315 877824 D lipoprotein 877315..877824 Prevotella ruminicola 23 9000269 YP_003574103.1 CDS PRU_0744 NC_014033.1 877911 879305 R identified by similarity to GB:CAE78930.1; match to protein family HMM PF06742; match to protein family HMM PF06863; hypothetical protein complement(877911..879305) Prevotella ruminicola 23 9000879 YP_003574104.1 CDS map_1 NC_014033.1 879624 880430 D identified by similarity to SP:P07906; match to protein family HMM PF00557; match to protein family HMM TIGR00500; methionine aminopeptidase, type I 879624..880430 Prevotella ruminicola 23 9000247 YP_003574105.1 CDS gcp NC_014033.1 880432 881457 D identified by similarity to SP:P36175; match to protein family HMM PF00814; match to protein family HMM TIGR00329; match to protein family HMM TIGR03723; O-sialoglycoprotein endopeptidase 880432..881457 Prevotella ruminicola 23 9002100 YP_003574106.1 CDS PRU_0747 NC_014033.1 881560 882075 D identified by match to protein family HMM PF02464; match to protein family HMM TIGR00199; competence/damage-inducible protein CinA domain-containing protein 881560..882075 Prevotella ruminicola 23 9001219 YP_003574107.1 CDS rpmB NC_014033.1 882195 882458 D identified by similarity to SP:P02428; match to protein family HMM PF00830; match to protein family HMM TIGR00009; 50S ribosomal protein L28 882195..882458 Prevotella ruminicola 23 9000591 YP_003574108.1 CDS rpmG NC_014033.1 882463 882654 D identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023; 50S ribosomal protein L33 882463..882654 Prevotella ruminicola 23 9000114 YP_003574109.1 CDS PRU_0750 NC_014033.1 882667 882825 D identified by glimmer; hypothetical protein 882667..882825 Prevotella ruminicola 23 9002343 YP_003574110.1 CDS ftsY NC_014033.1 882931 883884 D identified by similarity to SP:P51835; match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064; recognition particle-docking protein FtsY 882931..883884 Prevotella ruminicola 23 9002252 YP_003574111.1 CDS rimO NC_014033.1 883877 885190 D identified by match to protein family HMM PF00919; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01125; 30S ribosomal protein S12 methylthiotransferase RimO 883877..885190 Prevotella ruminicola 23 9001221 YP_003574112.1 CDS PRU_0753 NC_014033.1 885180 885467 D identified by match to protein family HMM PF00216; HU family DNA-binding protein 885180..885467 Prevotella ruminicola 23 9002117 YP_003574113.1 CDS PRU_0754 NC_014033.1 885467 886885 D identified by match to protein family HMM PF00216; HU family DNA-binding protein 885467..886885 Prevotella ruminicola 23 9001510 YP_003574114.1 CDS PRU_0755 NC_014033.1 886953 887732 D identified by match to protein family HMM PF01476; LysM domain-containing protein 886953..887732 Prevotella ruminicola 23 9000907 YP_003574115.1 CDS PRU_0756 NC_014033.1 887877 888872 D identified by similarity to GB:AAO76017.1; match to protein family HMM PF07726; match to protein family HMM PF07728; hypothetical protein 887877..888872 Prevotella ruminicola 23 9002366 YP_003574116.1 CDS PRU_0757 NC_014033.1 888903 889772 D identified by similarity to GB:AAQ66610.1; match to protein family HMM PF01882; hypothetical protein 888903..889772 Prevotella ruminicola 23 9002535 YP_003574117.1 CDS PRU_0758 NC_014033.1 889773 890840 D identified by similarity to GB:AAO76015.1; hypothetical protein 889773..890840 Prevotella ruminicola 23 9001915 YP_003574118.1 CDS PRU_0759 NC_014033.1 890851 891849 D identified by similarity to GB:AAD30858.1; match to protein family HMM PF00092; BatA protein 890851..891849 Prevotella ruminicola 23 9000559 YP_003574119.1 CDS PRU_0760 NC_014033.1 891852 893552 D identified by similarity to GB:AAD30859.1; match to protein family HMM PF00092; match to protein family HMM PF00515; match to protein family HMM PF07719; BatB/BatC protein 891852..893552 Prevotella ruminicola 23 9000952 YP_003574120.1 CDS PRU_0761 NC_014033.1 893552 896113 D identified by similarity to GB:AAD30862.1; similarity to GB:AAQ66615.1; match to protein family HMM PF00515; match to protein family HMM PF07719; BatD/BatE protein 893552..896113 Prevotella ruminicola 23 9000304 YP_003574121.1 CDS PRU_0762 NC_014033.1 896120 896809 D identified by match to protein family HMM PF01569; PAP2 domain-containing protein 896120..896809 Prevotella ruminicola 23 9002134 YP_003574122.1 CDS PRU_0763 NC_014033.1 896806 898023 D identified by match to protein family HMM PF02547; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 896806..898023 Prevotella ruminicola 23 9001152 YP_003574123.1 CDS PRU_0764 NC_014033.1 898086 898721 R identified by similarity to GB:AAQ65727.1; match to protein family HMM PF03938; lipoprotein complement(898086..898721) Prevotella ruminicola 23 9000409 YP_003574124.1 CDS PRU_0765 NC_014033.1 898760 898966 R identified by similarity to GB:AAO76721.1; hypothetical protein complement(898760..898966) Prevotella ruminicola 23 9001783 YP_003574125.1 CDS pepD_1 NC_014033.1 899034 900494 D identified by similarity to SP:P15288; match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893; Xaa-His dipeptidase 899034..900494 Prevotella ruminicola 23 9001702 YP_003574126.1 CDS PRU_0767 NC_014033.1 900494 900859 D lipoprotein 900494..900859 Prevotella ruminicola 23 9000506 YP_003574127.1 CDS PRU_0771 NC_014033.1 901333 901998 D identified by glimmer; hypothetical protein 901333..901998 Prevotella ruminicola 23 9002777 YP_003574128.1 CDS PRU_0772 NC_014033.1 902051 902959 R identified by similarity to GB:AAO77616.1; hypothetical protein complement(902051..902959) Prevotella ruminicola 23 9002660 YP_003574129.1 CDS PRU_0774 NC_014033.1 904990 906669 R identified by glimmer; hypothetical protein complement(904990..906669) Prevotella ruminicola 23 9002497 YP_003574130.1 CDS PRU_0775 NC_014033.1 907158 907943 R identified by match to protein family HMM PF01435; M48 family peptidase complement(907158..907943) Prevotella ruminicola 23 9002032 YP_003574131.1 CDS PRU_0776 NC_014033.1 907947 908678 R identified by similarity to SP:Q9ZJ24; match to protein family HMM PF03667; hypothetical protein complement(907947..908678) Prevotella ruminicola 23 9001574 YP_003574132.1 CDS PRU_0777 NC_014033.1 909000 909443 D identified by similarity to GB:AAM32675.1; match to protein family HMM PF06250; hypothetical protein 909000..909443 Prevotella ruminicola 23 9002181 YP_003574133.1 CDS PRU_0778 NC_014033.1 909509 909613 R lipoprotein complement(909509..909613) Prevotella ruminicola 23 9000094 YP_003574134.1 CDS PRU_0779 NC_014033.1 909730 910287 R identified by match to protein family HMM TIGR01201; DNA-binding protein complement(909730..910287) Prevotella ruminicola 23 9001731 YP_003574135.1 CDS PRU_0781 NC_014033.1 911662 912663 D identified by glimmer; hypothetical protein 911662..912663 Prevotella ruminicola 23 9002667 YP_003574136.1 CDS PRU_0782 NC_014033.1 912691 913185 D identified by glimmer; hypothetical protein 912691..913185 Prevotella ruminicola 23 9001163 YP_003574137.1 CDS PRU_0783 NC_014033.1 913353 913652 D identified by glimmer; hypothetical protein 913353..913652 Prevotella ruminicola 23 9000611 YP_003574138.1 CDS PRU_0784 NC_014033.1 913779 914129 D identified by glimmer; hypothetical protein 913779..914129 Prevotella ruminicola 23 9002435 YP_003574139.1 CDS PRU_0785 NC_014033.1 914285 916381 D identified by glimmer; hypothetical protein 914285..916381 Prevotella ruminicola 23 9001885 YP_003574140.1 CDS PRU_0786 NC_014033.1 917250 918062 R identified by similarity to GB:AAT89226.1; hypothetical protein complement(917250..918062) Prevotella ruminicola 23 9000885 YP_003574141.1 CDS PRU_0787 NC_014033.1 917986 919998 R identified by similarity to SP:Q8AB57; match to protein family HMM PF08497; hypothetical protein complement(917986..919998) Prevotella ruminicola 23 8999995 YP_003574142.1 CDS PRU_0788 NC_014033.1 920025 920369 R identified by similarity to GB:AAO75363.1; hypothetical protein complement(920025..920369) Prevotella ruminicola 23 9002144 YP_003574143.1 CDS PRU_0789 NC_014033.1 920386 923334 R identified by match to protein family HMM PF00041; N-acetylmuramoyl-L-alanine amidase complement(920386..923334) Prevotella ruminicola 23 9001206 YP_003574144.1 CDS PRU_0790 NC_014033.1 923331 923903 R identified by match to protein family HMM PF01553; acyltransferase family protein complement(923331..923903) Prevotella ruminicola 23 9000643 YP_003574145.1 CDS PRU_0791 NC_014033.1 923916 924182 R identified by similarity to GB:AAO75368.1; hypothetical protein complement(923916..924182) Prevotella ruminicola 23 9002724 YP_003574146.1 CDS PRU_0792 NC_014033.1 924391 926028 D identified by similarity to GB:AAG37271.1; match to protein family HMM PF00365; match to protein family HMM TIGR02477; diphosphate--fructose-6-phosphate 1-phosphotransferase 924391..926028 Prevotella ruminicola 23 9001750 YP_003574147.1 CDS PRU_0793 NC_014033.1 926118 927017 D identified by match to protein family HMM PF01183; family 25 glycosyl hydrolase 926118..927017 Prevotella ruminicola 23 9001624 YP_003574148.1 CDS PRU_0794 NC_014033.1 927030 927770 R identified by match to protein family HMM PF00588; match to protein family HMM PF08032; TrmH family RNA methyltransferase complement(927030..927770) Prevotella ruminicola 23 9002304 YP_003574149.1 CDS PRU_0795 NC_014033.1 927981 930092 D identified by match to protein family HMM PF01103; OMP85 family outer membrane protein 927981..930092 Prevotella ruminicola 23 9000272 YP_003574150.1 CDS PRU_0796 NC_014033.1 930189 931001 D identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 930189..931001 Prevotella ruminicola 23 9000849 YP_003574151.1 CDS PRU_0797 NC_014033.1 931014 931517 D identified by similarity to GB:AAO75283.1; hypothetical protein 931014..931517 Prevotella ruminicola 23 9001880 YP_003574152.1 CDS smpB NC_014033.1 931527 932009 D identified by match to protein family HMM PF01668; match to protein family HMM TIGR00086; SsrA-binding protein 931527..932009 Prevotella ruminicola 23 9002471 YP_003574153.1 CDS metH NC_014033.1 932037 934745 D identified by match to protein family HMM PF00809; match to protein family HMM PF02310; match to protein family HMM PF02574; match to protein family HMM PF02607; match to protein family HMM TIGR02082; 5-methyltetrahydrofolate--homocysteine methyltransferase 932037..934745 Prevotella ruminicola 23 9000628 YP_003574154.1 CDS PRU_0800 NC_014033.1 934756 936219 D identified by similarity to GB:AAO76844.1; match to protein family HMM PF02638; hypothetical protein 934756..936219 Prevotella ruminicola 23 9000085 YP_003574155.1 CDS PRU_0801 NC_014033.1 936288 936860 D identified by glimmer; hypothetical protein 936288..936860 Prevotella ruminicola 23 9000657 YP_003574156.1 CDS PRU_0802 NC_014033.1 936857 937297 R identified by similarity to GB:AAO79465.1; hypothetical protein complement(936857..937297) Prevotella ruminicola 23 9000364 YP_003574157.1 CDS PRU_0803 NC_014033.1 937452 937865 D identified by match to protein family HMM PF04246; RseC/MucC family positive regulator of sigma(E) 937452..937865 Prevotella ruminicola 23 9001699 YP_003574158.1 CDS PRU_0804 NC_014033.1 937891 938772 D identified by match to protein family HMM PF00037; match to protein family HMM PF04060; match to protein family HMM TIGR01944; RnfABCDGE type electron transport complex subunit B 937891..938772 Prevotella ruminicola 23 9001815 YP_003574159.1 CDS PRU_0805 NC_014033.1 938769 940139 D identified by match to protein family HMM PF01512; match to protein family HMM TIGR01945; RnfABCDGE type electron transport complex subunit C 938769..940139 Prevotella ruminicola 23 9000827 YP_003574160.1 CDS PRU_0806 NC_014033.1 940169 941161 D identified by match to protein family HMM PF03116; match to protein family HMM TIGR01946; RnfABCDGE type electron transport complex D subunit 940169..941161 Prevotella ruminicola 23 9002744 YP_003574161.1 CDS PRU_0807 NC_014033.1 941227 941808 D identified by match to protein family HMM PF04205; match to protein family HMM TIGR01947; RnfABCDGE type electron transport complex G subunit 941227..941808 Prevotella ruminicola 23 9001450 YP_003574162.1 CDS PRU_0808 NC_014033.1 941812 942399 D identified by match to protein family HMM PF02508; match to protein family HMM TIGR01948; RnfABCDGE type electron transport complex E subunit 941812..942399 Prevotella ruminicola 23 9001063 YP_003574163.1 CDS PRU_0809 NC_014033.1 942515 943117 D identified by match to protein family HMM PF02508; match to protein family HMM TIGR01943; RnfABCDGE type electron transport complex subunit A 942515..943117 Prevotella ruminicola 23 9000495 YP_003574164.1 CDS PRU_0810 NC_014033.1 943207 943905 D identified by similarity to GB:AAQ66361.1; hypothetical protein 943207..943905 Prevotella ruminicola 23 9002615 YP_003574165.1 CDS nadE NC_014033.1 943902 945842 D identified by similarity to SP:P71911; match to protein family HMM PF00795; match to protein family HMM PF02540; match to protein family HMM TIGR00552; glutamine-dependent NAD+ synthetase 943902..945842 Prevotella ruminicola 23 9002029 YP_003574166.1 CDS clpC NC_014033.1 945874 948408 R identified by similarity to SP:P37571; match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; ATP-dependent Clp protease ATP-binding subunit ClpC complement(945874..948408) Prevotella ruminicola 23 8999969 YP_003574167.1 CDS gyrA NC_014033.1 948652 951183 D identified by match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01063; DNA gyrase subunit A 948652..951183 Prevotella ruminicola 23 9000735 YP_003574168.1 CDS PRU_0814 NC_014033.1 951254 952468 D identified by similarity to GB:AAQ66446.1; match to protein family HMM PF07719; hypothetical protein 951254..952468 Prevotella ruminicola 23 9001625 YP_003574169.1 CDS PRU_0815 NC_014033.1 952621 953091 D identified by glimmer; hypothetical protein 952621..953091 Prevotella ruminicola 23 9002110 YP_003574170.1 CDS PRU_0816 NC_014033.1 953423 954022 R identified by similarity to GB:AAO76747.1; hypothetical protein complement(953423..954022) Prevotella ruminicola 23 9000430 YP_003574171.1 CDS PRU_0817 NC_014033.1 955286 956476 R identified by match to protein family HMM PF01740; STAS domain-containing protein complement(955286..956476) Prevotella ruminicola 23 9000891 YP_003574172.1 CDS PRU_0818 NC_014033.1 956583 958202 D identified by similarity to GB:AAQ65960.1; hypothetical protein 956583..958202 Prevotella ruminicola 23 9002721 YP_003574173.1 CDS PRU_0819 NC_014033.1 958372 958971 D identified by similarity to GB:AAO77200.1; hypothetical protein 958372..958971 Prevotella ruminicola 23 9000201 YP_003574174.1 CDS pheT NC_014033.1 959063 961525 D identified by similarity to SP:P07395; match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; phenylalanyl-tRNA synthetase subunit beta 959063..961525 Prevotella ruminicola 23 9000892 YP_003574175.1 CDS PRU_0821 NC_014033.1 961562 961927 D identified by similarity to PIR:AH1942; match to protein family HMM TIGR02436; hypothetical protein 961562..961927 Prevotella ruminicola 23 9001124 YP_003574176.1 CDS PRU_0822 NC_014033.1 961964 962701 D identified by similarity to SP:Q7MXR6; match to protein family HMM PF01709; match to protein family HMM TIGR01033; YebC/PmpR family DNA-binding regulatory protein 961964..962701 Prevotella ruminicola 23 9000758 YP_003574177.1 CDS PRU_0823 NC_014033.1 962742 963068 R identified by similarity to GB:AAS11709.1; hypothetical protein complement(962742..963068) Prevotella ruminicola 23 9002648 YP_003574178.1 CDS lepA NC_014033.1 963231 965012 D identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF06421; match to protein family HMM TIGR00231; match to protein family HMM TIGR01393; GTP-binding protein LepA 963231..965012 Prevotella ruminicola 23 9000644 YP_003574179.1 CDS PRU_0825 NC_014033.1 965059 965628 D identified by match to protein family HMM PF00027; cyclic nucleotide-binding domain-containing protein 965059..965628 Prevotella ruminicola 23 9001619 YP_003574180.1 CDS ruvC NC_014033.1 967074 967643 R identified by match to protein family HMM PF02075; match to protein family HMM TIGR00228; crossover junction endodeoxyribonuclease RuvC complement(967074..967643) Prevotella ruminicola 23 9001468 YP_003574181.1 CDS PRU_0828 NC_014033.1 967849 968691 D identified by match to protein family HMM PF00768; serine-type D-Ala-D-Ala carboxypeptidase 967849..968691 Prevotella ruminicola 23 9001895 YP_003574182.1 CDS PRU_0829 NC_014033.1 968678 969325 R identified by similarity to GB:CAG19648.1; hypothetical protein complement(968678..969325) Prevotella ruminicola 23 9000335 YP_003574183.1 CDS PRU_0830 NC_014033.1 969335 971521 R identified by match to protein family HMM PF03030; match to protein family HMM TIGR01104; V-type H(+)-translocating pyrophosphatase complement(969335..971521) Prevotella ruminicola 23 9002386 YP_003574184.1 CDS PRU_0831 NC_014033.1 971570 972289 R identified by glimmer; hypothetical protein complement(971570..972289) Prevotella ruminicola 23 9002631 YP_003574185.1 CDS PRU_0832 NC_014033.1 972504 973778 D identified by match to protein family HMM PF00004; AAA family ATPase 972504..973778 Prevotella ruminicola 23 9002036 YP_003574186.1 CDS PRU_0833 NC_014033.1 973786 974400 D identified by similarity to GB:AAO76308.1; match to protein family HMM PF03458; hypothetical protein 973786..974400 Prevotella ruminicola 23 9001717 YP_003574187.1 CDS dnaB NC_014033.1 974437 975945 D identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR00665; replicative DNA helicase 974437..975945 Prevotella ruminicola 23 9000321 YP_003574188.1 CDS PRU_0835 NC_014033.1 975949 977610 R identified by similarity to GB:AAO76466.1; hypothetical protein complement(975949..977610) Prevotella ruminicola 23 9002683 YP_003574189.1 CDS recN NC_014033.1 977669 979327 R identified by match to protein family HMM PF02463; match to protein family HMM TIGR00634; DNA repair protein RecN complement(977669..979327) Prevotella ruminicola 23 9001956 YP_003574190.1 CDS PRU_0837 NC_014033.1 979366 980271 R identified by similarity to GB:AAQ66839.1; hypothetical protein complement(979366..980271) Prevotella ruminicola 23 9001499 YP_003574191.1 CDS PRU_0838 NC_014033.1 980268 981125 R identified by match to protein family HMM PF00929; DNA polymerase III subunit epsilon complement(980268..981125) Prevotella ruminicola 23 9000102 YP_003574192.1 CDS dnaN NC_014033.1 981144 982268 R identified by match to protein family HMM PF00712; match to protein family HMM PF02767; match to protein family HMM PF02768; match to protein family HMM TIGR00663; DNA polymerase III subunit beta complement(981144..982268) Prevotella ruminicola 23 9000866 YP_003574193.1 CDS PRU_0840 NC_014033.1 982436 982819 D identified by similarity to GB:AAQ67046.1; hypothetical protein 982436..982819 Prevotella ruminicola 23 9001992 YP_003574194.1 CDS PRU_0841 NC_014033.1 983078 983788 R identified by similarity to GB:AAQ66215.1; match to protein family HMM PF01170; match to protein family HMM PF01596; match to protein family HMM PF05175; match to protein family HMM PF08241; match to protein family HMM PF08242; hypothetical protein complement(983078..983788) Prevotella ruminicola 23 9002081 YP_003574195.1 CDS lon NC_014033.1 983924 986347 D identified by similarity to SP:P37945; match to protein family HMM PF00004; match to protein family HMM PF02190; match to protein family HMM PF05362; match to protein family HMM PF07728; match to protein family HMM TIGR00763; endopeptidase La 983924..986347 Prevotella ruminicola 23 9000349 YP_003574196.1 CDS tgt NC_014033.1 986348 987490 D identified by similarity to SP:P19675; match to protein family HMM PF01702; match to protein family HMM TIGR00430; match to protein family HMM TIGR00449; tRNA-guanine transglycosylase 986348..987490 Prevotella ruminicola 23 9001154 YP_003574197.1 CDS PRU_0844 NC_014033.1 987487 988668 D identified by similarity to GB:AAO75941.1; match to protein family HMM PF03739; hypothetical protein 987487..988668 Prevotella ruminicola 23 9002072 YP_003574198.1 CDS PRU_0845 NC_014033.1 988668 990008 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; DEAD/DEAH box helicase 988668..990008 Prevotella ruminicola 23 9000224 YP_003574199.1 CDS ispE NC_014033.1 990029 990862 D identified by match to protein family HMM PF00288; match to protein family HMM TIGR00154; 4-diphosphocytidyl-2C-methyl-D-erythritol kinase 990029..990862 Prevotella ruminicola 23 9001183 YP_003574200.1 CDS galE NC_014033.1 990874 991914 D identified by similarity to SP:P55180; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM TIGR01179; UDP-glucose 4-epimerase 990874..991914 Prevotella ruminicola 23 9001705 YP_003574201.1 CDS PRU_0848 NC_014033.1 992644 993588 D identified by similarity to GB:CAG36135.1; match to protein family HMM PF09084; hypothetical protein 992644..993588 Prevotella ruminicola 23 9000697 YP_003574202.1 CDS PRU_0849 NC_014033.1 993585 995633 D identified by similarity to SP:P37979; match to protein family HMM PF00672; match to protein family HMM PF07228; IcfG-like protein 993585..995633 Prevotella ruminicola 23 9000898 YP_003574203.1 CDS PRU_0850 NC_014033.1 996385 997662 R identified by match to protein family HMM PF00860; match to protein family HMM PF00916; xanthine/uracil permease family protein complement(996385..997662) Prevotella ruminicola 23 9000264 YP_003574204.1 CDS PRU_0851 NC_014033.1 997659 998558 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(997659..998558) Prevotella ruminicola 23 9002688 YP_003574205.1 CDS PRU_0852 NC_014033.1 998835 999260 R identified by similarity to GB:AAS96205.1; hypothetical protein complement(998835..999260) Prevotella ruminicola 23 9001847 YP_003574206.1 CDS PRU_0853 NC_014033.1 999257 999499 R hypothetical protein complement(999257..999499) Prevotella ruminicola 23 9001960 YP_003574207.1 CDS PRU_0854 NC_014033.1 999880 1002648 D identified by similarity to GB:AAQ66572.1; hypothetical protein 999880..1002648 Prevotella ruminicola 23 9000251 YP_003574208.1 CDS PRU_0855 NC_014033.1 1003033 1003356 R identified by similarity to GB:AAO90188.1; hypothetical protein complement(1003033..1003356) Prevotella ruminicola 23 9000647 YP_003574209.1 CDS PRU_0856 NC_014033.1 1003344 1003619 R identified by glimmer; hypothetical protein complement(1003344..1003619) Prevotella ruminicola 23 9002476 YP_003574210.1 CDS PRU_0857 NC_014033.1 1003810 1005291 R identified by match to protein family HMM PF02368; surface protein complement(1003810..1005291) Prevotella ruminicola 23 9000145 YP_003574211.1 CDS PRU_0858 NC_014033.1 1005462 1006100 D identified by similarity to GB:AAO76747.1; hypothetical protein 1005462..1006100 Prevotella ruminicola 23 9000943 YP_003574212.1 CDS PRU_0859 NC_014033.1 1006161 1008296 R identified by similarity to GB:AAO79476.1; peptidyl-prolyl cis-trans isomerase-like protein complement(1006161..1008296) Prevotella ruminicola 23 9000295 YP_003574213.1 CDS PRU_0860 NC_014033.1 1008389 1009666 R identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; hypothetical protein complement(1008389..1009666) Prevotella ruminicola 23 9001120 YP_003574214.1 CDS PRU_0861 NC_014033.1 1009668 1010285 R identified by similarity to GB:AAO79474.1; match to protein family HMM PF06835; hypothetical protein complement(1009668..1010285) Prevotella ruminicola 23 9001870 YP_003574215.1 CDS PRU_0862 NC_014033.1 1010309 1011595 R identified by similarity to GB:AAQ65647.1; hypothetical protein complement(1010309..1011595) Prevotella ruminicola 23 9002681 YP_003574216.1 CDS PRU_0863 NC_014033.1 1011714 1012895 D identified by similarity to GB:BAD47820.1; hypothetical protein 1011714..1012895 Prevotella ruminicola 23 9000468 YP_003574217.1 CDS PRU_0864 NC_014033.1 1012892 1014055 D identified by similarity to GB:AAQ65709.1; hypothetical protein 1012892..1014055 Prevotella ruminicola 23 9000089 YP_003574218.1 CDS secA NC_014033.1 1014150 1017539 D identified by similarity to SP:P10408; match to protein family HMM PF00271; match to protein family HMM PF01043; match to protein family HMM PF02810; match to protein family HMM PF07516; match to protein family HMM PF07517; match to protein family HMM TIGR00963; preprotein translocase subunit SecA 1014150..1017539 Prevotella ruminicola 23 9000933 YP_003574219.1 CDS PRU_0866 NC_014033.1 1017547 1018248 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1017547..1018248 Prevotella ruminicola 23 9001511 YP_003574220.1 CDS feoB NC_014033.1 1018345 1020753 D identified by match to protein family HMM PF01926; match to protein family HMM PF02421; match to protein family HMM PF04023; match to protein family HMM PF07664; match to protein family HMM PF07670; match to protein family HMM TIGR00231; match to protein family HMM TIGR00437; ferrous iron transport protein B 1018345..1020753 Prevotella ruminicola 23 9001911 YP_003574221.1 CDS PRU_0868 NC_014033.1 1020765 1021889 D identified by similarity to GB:AAO78760.1; hypothetical protein 1020765..1021889 Prevotella ruminicola 23 9000078 YP_003574222.1 CDS PRU_0869 NC_014033.1 1021896 1022483 R hypothetical protein complement(1021896..1022483) Prevotella ruminicola 23 9002187 YP_003574223.1 CDS PRU_0870 NC_014033.1 1022473 1023192 R identified by match to protein family HMM PF00072; response regulator complement(1022473..1023192) Prevotella ruminicola 23 9001376 YP_003574224.1 CDS PRU_0871 NC_014033.1 1023174 1026353 R identified by match to protein family HMM PF02518; sensor histidine kinase complement(1023174..1026353) Prevotella ruminicola 23 9001313 YP_003574225.1 CDS PRU_0872 NC_014033.1 1026414 1027064 R identified by similarity to SP:P10177; match to protein family HMM PF01081; 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3-deoxyphosphogluconate aldolase complement(1026414..1027064) Prevotella ruminicola 23 9000546 YP_003574226.1 CDS PRU_0873 NC_014033.1 1027113 1028135 R identified by match to protein family HMM PF00294; 2-dehydro-3-deoxygluconokinase complement(1027113..1028135) Prevotella ruminicola 23 9000393 YP_003574227.1 CDS PRU_0874 NC_014033.1 1028336 1029403 D identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 1028336..1029403 Prevotella ruminicola 23 9002727 YP_003574228.1 CDS uxaA NC_014033.1 1029430 1030923 D identified by similarity to SP:P42604; match to protein family HMM PF04295; match to protein family HMM PF08666; altronate dehydratase 1029430..1030923 Prevotella ruminicola 23 9000946 YP_003574229.1 CDS PRU_0876 NC_014033.1 1030920 1032194 D identified by match to protein family HMM PF03553; match to protein family HMM PF06808; NhaC sodium:hydrogen antiporter family sodium transporter 1030920..1032194 Prevotella ruminicola 23 9002467 YP_003574230.1 CDS PRU_0877 NC_014033.1 1032191 1033000 D identified by glimmer; hypothetical protein 1032191..1033000 Prevotella ruminicola 23 9000466 YP_003574231.1 CDS PRU_0878 NC_014033.1 1032965 1033822 R identified by match to protein family HMM PF01183; family 25 glycosyl hydrolase complement(1032965..1033822) Prevotella ruminicola 23 9001214 YP_003574232.1 CDS PRU_0879 NC_014033.1 1033959 1035224 D identified by similarity to GB:BAD49490.1; lipoprotein 1033959..1035224 Prevotella ruminicola 23 9001440 YP_003574233.1 CDS PRU_0880 NC_014033.1 1035303 1036619 R identified by similarity to GB:AAG00559.2; match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; match to protein family HMM TIGR03520; gliding motility protein GldE complement(1035303..1036619) Prevotella ruminicola 23 9002157 YP_003574234.1 CDS ssb NC_014033.1 1036591 1036953 R identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; single-strand binding protein complement(1036591..1036953) Prevotella ruminicola 23 9000176 YP_003574235.1 CDS PRU_0882 NC_014033.1 1036978 1037520 R identified by similarity to PIR:B84079; hypothetical protein complement(1036978..1037520) Prevotella ruminicola 23 9000944 YP_003574236.1 CDS nspC NC_014033.1 1038099 1039220 R identified by similarity to GB:BAA06561.1; match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01047; carboxynorspermidine decarboxylase complement(1038099..1039220) Prevotella ruminicola 23 9002805 YP_003574237.1 CDS PRU_0888 NC_014033.1 1039220 1040362 R identified by match to protein family HMM PF00072; match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase/response regulator complement(1039220..1040362) Prevotella ruminicola 23 9002601 YP_003574238.1 CDS carB NC_014033.1 1040486 1043665 R identified by match to protein family HMM PF00289; match to protein family HMM PF02142; match to protein family HMM PF02222; match to protein family HMM PF02786; match to protein family HMM PF02787; match to protein family HMM PF08443; match to protein family HMM TIGR01369; carbamoyl-phosphate synthase large subunit complement(1040486..1043665) Prevotella ruminicola 23 9000360 YP_003574239.1 CDS glmS NC_014033.1 1044856 1046700 R identified by similarity to SP:Q56213; match to protein family HMM PF00310; match to protein family HMM PF01380; match to protein family HMM TIGR01135; glutamine--fructose-6-phosphate transaminase complement(1044856..1046700) Prevotella ruminicola 23 9001068 YP_003574240.1 CDS speG NC_014033.1 1047126 1047644 R identified by similarity to SP:P37354; match to protein family HMM PF00583; spermidine N(1)-acetyltransferase complement(1047126..1047644) Prevotella ruminicola 23 9002783 YP_003574241.1 CDS PRU_0895 NC_014033.1 1047641 1048480 R identified by similarity to GB:AAF04376.1; match to protein family HMM PF00535; dTDP-Rha:a-D-GlcNAc-diphosphoryl polyprenol, a-3-L-rhamnosyl transferase complement(1047641..1048480) Prevotella ruminicola 23 9002133 YP_003574242.1 CDS PRU_0896 NC_014033.1 1048502 1048927 R identified by similarity to GB:AAO76187.1; hypothetical protein complement(1048502..1048927) Prevotella ruminicola 23 9000112 YP_003574243.1 CDS recR NC_014033.1 1048934 1049551 R identified by match to protein family HMM PF01751; match to protein family HMM PF02132; match to protein family HMM TIGR00615; recombination protein RecR complement(1048934..1049551) Prevotella ruminicola 23 9002006 YP_003574244.1 CDS PRU_0898 NC_014033.1 1049548 1051344 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(1049548..1051344) Prevotella ruminicola 23 9002567 YP_003574245.1 CDS ysxC NC_014033.1 1051344 1051946 R identified by match to protein family HMM PF01926; match to protein family HMM TIGR03598; ribosome biogenesis GTP-binding protein YsxC complement(1051344..1051946) Prevotella ruminicola 23 9000766 YP_003574246.1 CDS rho NC_014033.1 1052198 1054171 D identified by similarity to SP:P26980; match to protein family HMM PF00006; match to protein family HMM PF07497; match to protein family HMM TIGR00767; transcription termination factor Rho 1052198..1054171 Prevotella ruminicola 23 8999965 YP_003574247.1 CDS PRU_0901 NC_014033.1 1054172 1054621 D identified by similarity to SP:P24666; match to protein family HMM PF01451; low molecular weight phosphotyrosine protein phosphatase 1054172..1054621 Prevotella ruminicola 23 9000595 YP_003574248.1 CDS tilS NC_014033.1 1055089 1056390 R identified by match to protein family HMM PF01171; match to protein family HMM PF06508; match to protein family HMM TIGR02432; match to protein family HMM TIGR02433; tRNA(Ile)-lysidine synthetase complement(1055089..1056390) Prevotella ruminicola 23 9000583 YP_003574249.1 CDS PRU_0904 NC_014033.1 1056380 1057552 R identified by match to protein family HMM PF01472; PUA domain-containing protein complement(1056380..1057552) Prevotella ruminicola 23 9001884 YP_003574250.1 CDS PRU_0905 NC_014033.1 1057533 1058186 R identified by match to protein family HMM PF01612; 3'-5' exonuclease complement(1057533..1058186) Prevotella ruminicola 23 9000709 YP_003574251.1 CDS PRU_0906 NC_014033.1 1058276 1060720 D identified by match to protein family HMM PF01580; match to protein family HMM PF09397; prophage PRU01 FtsK/SpoIIIE family protein 1058276..1060720 Prevotella ruminicola 23 9000602 YP_003574252.1 CDS PRU_0907 NC_014033.1 1060723 1061319 D identified by similarity to GB:AAQ66659.1; match to protein family HMM PF03548; hypothetical protein 1060723..1061319 Prevotella ruminicola 23 9002063 YP_003574253.1 CDS PRU_0908 NC_014033.1 1061336 1062820 D identified by similarity to GB:AAO79424.1; prophage PRU01 membrane protein 1061336..1062820 Prevotella ruminicola 23 9001465 YP_003574254.1 CDS PRU_0911 NC_014033.1 1063424 1064569 D identified by match to protein family HMM PF00589; prophage PRU01 site-specific recombinase 1063424..1064569 Prevotella ruminicola 23 9002813 YP_003574255.1 CDS PRU_0912 NC_014033.1 1064562 1066511 R identified by glimmer; hypothetical protein complement(1064562..1066511) Prevotella ruminicola 23 9000548 YP_003574256.1 CDS PRU_0913 NC_014033.1 1066529 1070551 R identified by match to protein family HMM TIGR01760; prophage PRU01 tail tape measure protein complement(1066529..1070551) Prevotella ruminicola 23 9002426 YP_003574257.1 CDS PRU_0914 NC_014033.1 1071292 1071705 R identified by glimmer; hypothetical protein complement(1071292..1071705) Prevotella ruminicola 23 9001209 YP_003574258.1 CDS PRU_0915 NC_014033.1 1072498 1073847 R identified by glimmer; hypothetical protein complement(1072498..1073847) Prevotella ruminicola 23 9000770 YP_003574259.1 CDS PRU_0916 NC_014033.1 1074692 1075111 R identified by similarity to SP:P00806; match to protein family HMM PF01510; prophage PRU01 N-acetylmuramoyl-L-alanine amidase complement(1074692..1075111) Prevotella ruminicola 23 9000067 YP_003574260.1 CDS PRU_0917 NC_014033.1 1075480 1076424 D identified by glimmer; hypothetical protein 1075480..1076424 Prevotella ruminicola 23 9002281 YP_003574261.1 CDS PRU_0918 NC_014033.1 1076425 1076853 R identified by glimmer; hypothetical protein complement(1076425..1076853) Prevotella ruminicola 23 9000099 YP_003574262.1 CDS PRU_0919 NC_014033.1 1076844 1077383 R identified by glimmer; hypothetical protein complement(1076844..1077383) Prevotella ruminicola 23 9001079 YP_003574263.1 CDS PRU_0920 NC_014033.1 1077457 1078146 R identified by glimmer; hypothetical protein complement(1077457..1078146) Prevotella ruminicola 23 9001997 YP_003574264.1 CDS PRU_0921 NC_014033.1 1079225 1080022 R identified by glimmer; hypothetical protein complement(1079225..1080022) Prevotella ruminicola 23 9002415 YP_003574265.1 CDS PRU_0922 NC_014033.1 1080883 1081731 R identified by glimmer; hypothetical protein complement(1080883..1081731) Prevotella ruminicola 23 9000194 YP_003574266.1 CDS PRU_0923 NC_014033.1 1081731 1082924 R identified by glimmer; hypothetical protein complement(1081731..1082924) Prevotella ruminicola 23 9001001 YP_003574267.1 CDS umuD_1 NC_014033.1 1083362 1083823 D identified by similarity to SP:P04153; match to protein family HMM PF00717; prophage PRU01 UmuD protein 1083362..1083823 Prevotella ruminicola 23 9001077 YP_003574268.1 CDS PRU_0925 NC_014033.1 1083808 1085100 D identified by match to protein family HMM PF00817; prophage PRU01 ImpB/MucB/SamB family protein 1083808..1085100 Prevotella ruminicola 23 9002051 YP_003574269.1 CDS PRU_0926 NC_014033.1 1085591 1085821 R identified by glimmer; hypothetical protein complement(1085591..1085821) Prevotella ruminicola 23 9002638 YP_003574270.1 CDS PRU_0927 NC_014033.1 1085818 1086774 R identified by glimmer; hypothetical protein complement(1085818..1086774) Prevotella ruminicola 23 9002687 YP_003574271.1 CDS PRU_0928 NC_014033.1 1087128 1087508 R identified by glimmer; hypothetical protein complement(1087128..1087508) Prevotella ruminicola 23 9000813 YP_003574272.1 CDS PRU_0929 NC_014033.1 1087558 1087779 R identified by glimmer; hypothetical protein complement(1087558..1087779) Prevotella ruminicola 23 9001628 YP_003574273.1 CDS PRU_0930 NC_014033.1 1088720 1090234 R identified by similarity to PIR:S75750; hypothetical protein complement(1088720..1090234) Prevotella ruminicola 23 9002254 YP_003574274.1 CDS PRU_0931 NC_014033.1 1090237 1091769 R identified by similarity to GB:AAO76874.1; hypothetical protein complement(1090237..1091769) Prevotella ruminicola 23 9000651 YP_003574275.1 CDS PRU_0932 NC_014033.1 1092334 1092783 R identified by glimmer; hypothetical protein complement(1092334..1092783) Prevotella ruminicola 23 9001281 YP_003574276.1 CDS PRU_0933 NC_014033.1 1093809 1095008 R identified by similarity to PIR:AB2524; hypothetical protein complement(1093809..1095008) Prevotella ruminicola 23 9001866 YP_003574277.1 CDS PRU_0934 NC_014033.1 1095560 1096618 R prophage PRU01 transcriptional regulator complement(1095560..1096618) Prevotella ruminicola 23 9000382 YP_003574278.1 CDS PRU_0935 NC_014033.1 1096804 1097382 D hypothetical protein 1096804..1097382 Prevotella ruminicola 23 9000156 YP_003574279.1 CDS PRU_0936 NC_014033.1 1097990 1098211 R identified by similarity to GB:AAO77865.1; hypothetical protein complement(1097990..1098211) Prevotella ruminicola 23 9002331 YP_003574280.1 CDS PRU_0937 NC_014033.1 1098522 1099469 R identified by similarity to SP:O68584; prophage PRU01 type II restriction endonuclease complement(1098522..1099469) Prevotella ruminicola 23 9001555 YP_003574281.1 CDS PRU_0938 NC_014033.1 1099473 1100465 R identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675; prophage PRU01 DNA methylase, C-5 cytosine-specific family complement(1099473..1100465) Prevotella ruminicola 23 9000731 YP_003574282.1 CDS PRU_0939 NC_014033.1 1100475 1101335 R identified by similarity to SP:P24617; prophage PRU01 type II restriction endonuclease complement(1100475..1101335) Prevotella ruminicola 23 9000097 YP_003574283.1 CDS PRU_0940 NC_014033.1 1102061 1102303 R identified by glimmer; hypothetical protein complement(1102061..1102303) Prevotella ruminicola 23 9002587 YP_003574284.1 CDS PRU_0941 NC_014033.1 1102604 1102702 D identified by glimmer; hypothetical protein 1102604..1102702 Prevotella ruminicola 23 9002009 YP_003574285.1 CDS PRU_0942 NC_014033.1 1103133 1103948 R identified by glimmer; hypothetical protein complement(1103133..1103948) Prevotella ruminicola 23 9001975 YP_003574286.1 CDS PRU_0943 NC_014033.1 1104561 1105355 R identified by glimmer; hypothetical protein complement(1104561..1105355) Prevotella ruminicola 23 9002509 YP_003574287.1 CDS PRU_0944 NC_014033.1 1105450 1107198 R identified by glimmer; hypothetical protein complement(1105450..1107198) Prevotella ruminicola 23 9000193 YP_003574288.1 CDS PRU_0945 NC_014033.1 1107330 1107770 R identified by similarity to PIR:B75029; hypothetical protein complement(1107330..1107770) Prevotella ruminicola 23 9000863 YP_003574289.1 CDS PRU_0947 NC_014033.1 1108932 1109216 R identified by glimmer; hypothetical protein complement(1108932..1109216) Prevotella ruminicola 23 9000278 YP_003574290.1 CDS PRU_0949 NC_014033.1 1110522 1111163 R identified by glimmer; hypothetical protein complement(1110522..1111163) Prevotella ruminicola 23 9000189 YP_003574291.1 CDS PRU_0950 NC_014033.1 1111186 1112121 R identified by glimmer; hypothetical protein complement(1111186..1112121) Prevotella ruminicola 23 9001435 YP_003574292.1 CDS PRU_0952 NC_014033.1 1113236 1114189 R identified by glimmer; hypothetical protein complement(1113236..1114189) Prevotella ruminicola 23 9000834 YP_003574293.1 CDS PRU_0953 NC_014033.1 1114301 1115398 R identified by match to protein family HMM PF00574; Clp protease complement(1114301..1115398) Prevotella ruminicola 23 9000030 YP_003574294.1 CDS PRU_0954 NC_014033.1 1115509 1116180 R identified by glimmer; hypothetical protein complement(1115509..1116180) Prevotella ruminicola 23 9001789 YP_003574295.1 CDS PRU_0956 NC_014033.1 1117614 1117907 D identified by similarity to GB:AAL64630.1; hypothetical protein 1117614..1117907 Prevotella ruminicola 23 9002522 YP_003574296.1 CDS PRU_0957 NC_014033.1 1118155 1118580 D identified by match to protein family HMM PF00011; heat shock protein, class I 1118155..1118580 Prevotella ruminicola 23 9000027 YP_003574297.1 CDS PRU_0958 NC_014033.1 1119093 1122287 R identified by match to protein family HMM PF01751; match to protein family HMM PF01807; match to protein family HMM PF08275; match to protein family HMM TIGR01391; DNA primase complement(1119093..1122287) Prevotella ruminicola 23 9001567 YP_003574298.1 CDS PRU_0959 NC_014033.1 1123029 1123226 R identified by similarity to GB:AAO79652.1; hypothetical protein complement(1123029..1123226) Prevotella ruminicola 23 9000720 YP_003574299.1 CDS PRU_0962 NC_014033.1 1126177 1126494 D identified by similarity to GB:CAC45623.1; match to protein family HMM PF05015; hypothetical protein 1126177..1126494 Prevotella ruminicola 23 9000140 YP_003574300.1 CDS PRU_0963 NC_014033.1 1126563 1126847 D identified by similarity to SP:Q46560; match to protein family HMM PF01381; match to protein family HMM TIGR02607; virulence-associated protein 1126563..1126847 Prevotella ruminicola 23 9002057 YP_003574301.1 CDS PRU_0964 NC_014033.1 1127170 1127301 D identified by glimmer; hypothetical protein 1127170..1127301 Prevotella ruminicola 23 9001092 YP_003574302.1 CDS PRU_0965 NC_014033.1 1127406 1129796 D identified by similarity to GB:AAO78428.1; hypothetical protein 1127406..1129796 Prevotella ruminicola 23 9001449 YP_003574303.1 CDS PRU_0966 NC_014033.1 1130028 1130840 R identified by similarity to GB:AAO79747.1; hypothetical protein complement(1130028..1130840) Prevotella ruminicola 23 9000985 YP_003574304.1 CDS PRU_0967 NC_014033.1 1131026 1131655 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; HAD-superfamily hydrolase 1131026..1131655 Prevotella ruminicola 23 9001119 YP_003574305.1 CDS PRU_0968 NC_014033.1 1131739 1132128 D identified by glimmer; hypothetical protein 1131739..1132128 Prevotella ruminicola 23 9001027 YP_003574306.1 CDS PRU_0969 NC_014033.1 1132148 1132645 D identified by match to protein family HMM PF00881; nitroreductase family protein 1132148..1132645 Prevotella ruminicola 23 9002351 YP_003574307.1 CDS PRU_0970 NC_014033.1 1132891 1133319 R identified by glimmer; hypothetical protein complement(1132891..1133319) Prevotella ruminicola 23 9001685 YP_003574308.1 CDS PRU_0971 NC_014033.1 1133387 1133995 R identified by similarity to GB:CAG73253.1; match to protein family HMM PF05728; hypothetical protein complement(1133387..1133995) Prevotella ruminicola 23 9000793 YP_003574309.1 CDS PRU_0972 NC_014033.1 1134012 1134410 R identified by match to protein family HMM PF00254; FKBP family peptidyl-prolyl cis-trans isomerase complement(1134012..1134410) Prevotella ruminicola 23 9001052 YP_003574310.1 CDS PRU_0973 NC_014033.1 1134675 1135676 R identified by glimmer; hypothetical protein complement(1134675..1135676) Prevotella ruminicola 23 9001910 YP_003574311.1 CDS PRU_0974 NC_014033.1 1136033 1136935 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 1136033..1136935 Prevotella ruminicola 23 9001488 YP_003574312.1 CDS PRU_0975 NC_014033.1 1136975 1137886 D identified by match to protein family HMM PF02880; phosphoglucomutase/phosphomannomutase family protein 1136975..1137886 Prevotella ruminicola 23 9001638 YP_003574313.1 CDS PRU_0976 NC_014033.1 1137968 1138333 R identified by similarity to GB:AAO77285.1; hypothetical protein complement(1137968..1138333) Prevotella ruminicola 23 9000831 YP_003574314.1 CDS PRU_0979 NC_014033.1 1138846 1139757 R identified by similarity to GB:AAB70257.1; match to protein family HMM PF01476; match to protein family HMM PF01832; hemagglutinin complement(1138846..1139757) Prevotella ruminicola 23 9002795 YP_003574315.1 CDS PRU_0980 NC_014033.1 1139877 1140308 D identified by similarity to SP:P19079; match to protein family HMM PF00383; cytidine deaminase 1139877..1140308 Prevotella ruminicola 23 9002084 YP_003574316.1 CDS PRU_0981 NC_014033.1 1140305 1141633 R lipoprotein complement(1140305..1141633) Prevotella ruminicola 23 9001275 YP_003574317.1 CDS PRU_0982 NC_014033.1 1141675 1142232 R identified by match to protein family HMM PF00301; match to protein family HMM PF02915; rubredoxin/rubrerythrin domain-containing protein complement(1141675..1142232) Prevotella ruminicola 23 9002256 YP_003574318.1 CDS PRU_0983 NC_014033.1 1142364 1143131 R identified by match to protein family HMM PF00657; lipase/acylhydrolase complement(1142364..1143131) Prevotella ruminicola 23 9001678 YP_003574319.1 CDS hisS NC_014033.1 1143254 1144612 R identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00442; histidine--tRNA ligase complement(1143254..1144612) Prevotella ruminicola 23 9000087 YP_003574320.1 CDS PRU_0985 NC_014033.1 1144640 1144999 R identified by similarity to GB:AAO75459.1; match to protein family HMM TIGR02436; hypothetical protein complement(1144640..1144999) Prevotella ruminicola 23 9000832 YP_003574321.1 CDS purA NC_014033.1 1145070 1146341 R identified by match to protein family HMM PF00709; match to protein family HMM TIGR00184; adenylosuccinate synthase complement(1145070..1146341) Prevotella ruminicola 23 9000379 YP_003574322.1 CDS PRU_0987 NC_014033.1 1146338 1146847 R identified by match to protein family HMM PF01475; Fur family transcriptional regulator complement(1146338..1146847) Prevotella ruminicola 23 9002739 YP_003574323.1 CDS PRU_0988 NC_014033.1 1146910 1147506 R hypothetical protein complement(1146910..1147506) Prevotella ruminicola 23 9001929 YP_003574324.1 CDS PRU_0989 NC_014033.1 1147634 1149583 R identified by match to protein family HMM PF03571; M49 family peptidase complement(1147634..1149583) Prevotella ruminicola 23 9000473 YP_003574325.1 CDS PRU_0990 NC_014033.1 1149586 1150059 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(1149586..1150059) Prevotella ruminicola 23 9000083 YP_003574326.1 CDS recQ_2 NC_014033.1 1150180 1152003 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF00570; match to protein family HMM PF09382; match to protein family HMM TIGR00614; match to protein family HMM TIGR01389; ATP-dependent DNA helicase RecQ 1150180..1152003 Prevotella ruminicola 23 9002381 YP_003574327.1 CDS PRU_0992 NC_014033.1 1152151 1152966 D identified by similarity to SP:P39125; match to protein family HMM PF08323; glycogen synthase-like protein 1152151..1152966 Prevotella ruminicola 23 9001587 YP_003574328.1 CDS PRU_0993 NC_014033.1 1152994 1154454 D lipoprotein 1152994..1154454 Prevotella ruminicola 23 9002387 YP_003574329.1 CDS PRU_0994 NC_014033.1 1154461 1154592 D identified by glimmer; hypothetical protein 1154461..1154592 Prevotella ruminicola 23 9002335 YP_003574330.1 CDS PRU_0995 NC_014033.1 1154615 1157044 R identified by similarity to SP:P56255; match to protein family HMM PF00580; ATP-dependent DNA helicase PcrA complement(1154615..1157044) Prevotella ruminicola 23 9002416 YP_003574331.1 CDS PRU_0996 NC_014033.1 1157598 1159967 R identified by glimmer; hypothetical protein complement(1157598..1159967) Prevotella ruminicola 23 9000543 YP_003574332.1 CDS PRU_0997 NC_014033.1 1159964 1160407 R identified by glimmer; hypothetical protein complement(1159964..1160407) Prevotella ruminicola 23 9001351 YP_003574333.1 CDS PRU_0998 NC_014033.1 1160524 1160955 R identified by glimmer; hypothetical protein complement(1160524..1160955) Prevotella ruminicola 23 9002692 YP_003574334.1 CDS PRU_0999 NC_014033.1 1161012 1161644 R identified by match to protein family HMM PF09669; antirepressor complement(1161012..1161644) Prevotella ruminicola 23 9000001 YP_003574335.1 CDS PRU_1000 NC_014033.1 1162036 1163337 R identified by glimmer; hypothetical protein complement(1162036..1163337) Prevotella ruminicola 23 9000776 YP_003574336.1 CDS PRU_1001 NC_014033.1 1163793 1164713 D identified by similarity to GB:AAM39638.1; match to protein family HMM PF07751; hypothetical protein 1163793..1164713 Prevotella ruminicola 23 9001544 YP_003574337.1 CDS PRU_1002 NC_014033.1 1164840 1166084 R identified by match to protein family HMM PF01555; DNA (cytosine-5-)-methyltransferase complement(1164840..1166084) Prevotella ruminicola 23 9000212 YP_003574338.1 CDS PRU_1003 NC_014033.1 1166084 1167502 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; type III restriction-modification system subunit Res complement(1166084..1167502) Prevotella ruminicola 23 9000994 YP_003574339.1 CDS PRU_1004 NC_014033.1 1167499 1169796 R identified by similarity to GB:AAD03904.1; match to protein family HMM TIGR03187; hypothetical protein complement(1167499..1169796) Prevotella ruminicola 23 9000669 YP_003574340.1 CDS PRU_1005 NC_014033.1 1170251 1171177 R identified by match to protein family HMM PF02086; match to protein family HMM TIGR00571; DNA adenine methylase complement(1170251..1171177) Prevotella ruminicola 23 9000435 YP_003574341.1 CDS PRU_1006 NC_014033.1 1171648 1172367 R identified by similarity to SP:Q9RLM3; hypothetical protein complement(1171648..1172367) Prevotella ruminicola 23 9002621 YP_003574342.1 CDS PRU_1009 NC_014033.1 1174275 1175696 R identified by match to protein family HMM PF04326; match to protein family HMM PF08279; divergent AAA domain-containing protein complement(1174275..1175696) Prevotella ruminicola 23 9000990 YP_003574343.1 CDS PRU_1010 NC_014033.1 1176444 1177001 D identified by match to protein family HMM TIGR01201; DNA-binding protein 1176444..1177001 Prevotella ruminicola 23 9001422 YP_003574344.1 CDS PRU_1011 NC_014033.1 1177259 1178809 R lipoprotein complement(1177259..1178809) Prevotella ruminicola 23 9001197 YP_003574345.1 CDS PRU_1012 NC_014033.1 1178826 1181495 R identified by match to protein family HMM PF00924; mechanosensitive ion channel family protein complement(1178826..1181495) Prevotella ruminicola 23 9000569 YP_003574346.1 CDS PRU_1014 NC_014033.1 1182767 1183762 D identified by similarity to SP:P35160; match to protein family HMM PF00578; match to protein family HMM PF08534; thioredoxin domain-containing protein 1182767..1183762 Prevotella ruminicola 23 9001696 YP_003574347.1 CDS PRU_1015 NC_014033.1 1183774 1184520 D identified by similarity to GB:AAM71274.1; match to protein family HMM PF02578; match to protein family HMM TIGR00726; hypothetical protein 1183774..1184520 Prevotella ruminicola 23 9001057 YP_003574348.1 CDS thrA NC_014033.1 1184650 1187082 D identified by similarity to SP:P00561; match to protein family HMM PF00696; match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447; match to protein family HMM TIGR00657; aspartate kinase/homoserine dehydrogenase 1184650..1187082 Prevotella ruminicola 23 9001820 YP_003574349.1 CDS PRU_1017 NC_014033.1 1187121 1188365 D assignment based on phylogenetic profiling and gene location.; identified by match to protein family HMM PF01676; match to protein family HMM TIGR00306; match to protein family HMM TIGR02535; homoserine kinase 1187121..1188365 Prevotella ruminicola 23 9002380 YP_003574350.1 CDS thrC NC_014033.1 1188440 1189762 D identified by similarity to SP:P00934; match to protein family HMM PF00291; match to protein family HMM TIGR00260; threonine synthase 1188440..1189762 Prevotella ruminicola 23 9001048 YP_003574351.1 CDS PRU_1019 NC_014033.1 1189844 1190767 R identified by match to protein family HMM PF03631; match to protein family HMM TIGR00765; YihY family protein complement(1189844..1190767) Prevotella ruminicola 23 9000797 YP_003574352.1 CDS degP NC_014033.1 1191453 1192946 D identified by similarity to SP:P09376; match to protein family HMM PF00089; match to protein family HMM PF00595; match to protein family HMM TIGR02037; peptidase Do 1191453..1192946 Prevotella ruminicola 23 9001562 YP_003574353.1 CDS PRU_1021 NC_014033.1 1193057 1193917 D identified by similarity to GB:AAB07555.1; match to protein family HMM PF00140; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; RNA polymerase sigma factor RpoD 1193057..1193917 Prevotella ruminicola 23 9000029 YP_003574354.1 CDS PRU_1022 NC_014033.1 1193956 1194339 D identified by similarity to GB:AAO76416.1; hypothetical protein 1193956..1194339 Prevotella ruminicola 23 9001938 YP_003574355.1 CDS PRU_1023 NC_014033.1 1194377 1195687 R identified by similarity to GB:AAN30193.1; match to protein family HMM PF00155; aminotransferase domain-containing protein complement(1194377..1195687) Prevotella ruminicola 23 9001276 YP_003574356.1 CDS PRU_1024 NC_014033.1 1195808 1196380 R identified by similarity to SP:O07836; match to protein family HMM PF01558; indolepyruvate oxidoreductase subunit beta complement(1195808..1196380) Prevotella ruminicola 23 9002195 YP_003574357.1 CDS PRU_1025 NC_014033.1 1196408 1198009 R identified by similarity to SP:O07835; match to protein family HMM PF02775; indolepyruvate oxidoreductase subunit alpha complement(1196408..1198009) Prevotella ruminicola 23 9000002 YP_003574358.1 CDS PRU_1026 NC_014033.1 1198222 1199793 R identified by similarity to GB:AAQ66654.1; hypothetical protein complement(1198222..1199793) Prevotella ruminicola 23 9000941 YP_003574359.1 CDS PRU_1027 NC_014033.1 1199838 1200794 R identified by similarity to GB:AAO75422.1; hypothetical protein complement(1199838..1200794) Prevotella ruminicola 23 9001564 YP_003574360.1 CDS prmA NC_014033.1 1200963 1201805 D identified by similarity to SP:P28637; match to protein family HMM PF06325; 50S ribosomal protein L11 methyltransferase 1200963..1201805 Prevotella ruminicola 23 9002456 YP_003574361.1 CDS PRU_1030 NC_014033.1 1202754 1206038 D identified by match to protein family HMM PF00289; match to protein family HMM PF02142; match to protein family HMM PF02222; match to protein family HMM PF02786; match to protein family HMM PF02787; match to protein family HMM TIGR01369; carbamoyl-phosphate synthase large subunit 1202754..1206038 Prevotella ruminicola 23 9000608 YP_003574362.1 CDS PRU_1031 NC_014033.1 1206187 1206771 D identified by similarity to GB:AAO76257.1; match to protein family HMM PF01205; hypothetical protein 1206187..1206771 Prevotella ruminicola 23 9000351 YP_003574363.1 CDS PRU_1033 NC_014033.1 1207009 1207281 R identified by similarity to GB:AAO75735.1; hypothetical protein complement(1207009..1207281) Prevotella ruminicola 23 9002804 YP_003574364.1 CDS PRU_1034 NC_014033.1 1207286 1208533 R identified by similarity to GB:AAO76258.1; match to protein family HMM PF06245; hypothetical protein complement(1207286..1208533) Prevotella ruminicola 23 9001130 YP_003574365.1 CDS PRU_1035 NC_014033.1 1208571 1208996 R identified by match to protein family HMM PF01230; HIT domain-containing protein complement(1208571..1208996) Prevotella ruminicola 23 9000507 YP_003574366.1 CDS serA NC_014033.1 1209076 1209993 R identified by similarity to GB:BAD00050.1; match to protein family HMM PF00389; match to protein family HMM PF02826; D-phosphoglycerate dehydrogenase complement(1209076..1209993) Prevotella ruminicola 23 9000646 YP_003574367.1 CDS PRU_1037 NC_014033.1 1210030 1210401 R identified by similarity to GB:AAO35078.1; match to protein family HMM TIGR02436; hypothetical protein complement(1210030..1210401) Prevotella ruminicola 23 9002459 YP_003574368.1 CDS serC NC_014033.1 1210427 1211494 R identified by similarity to SP:P80862; match to protein family HMM PF00266; match to protein family HMM TIGR01364; phosphoserine transaminase complement(1210427..1211494) Prevotella ruminicola 23 9002171 YP_003574369.1 CDS PRU_1039 NC_014033.1 1211813 1212205 D identified by similarity to SP:P29252; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1211813..1212205 Prevotella ruminicola 23 9001751 YP_003574370.1 CDS PRU_1040 NC_014033.1 1212202 1213434 D identified by similarity to GB:AAO77157.1; match to protein family HMM PF09471; hypothetical protein 1212202..1213434 Prevotella ruminicola 23 9000979 YP_003574371.1 CDS PRU_1041 NC_014033.1 1213431 1214237 D identified by match to protein family HMM PF00588; TrmH family RNA methyltransferase 1213431..1214237 Prevotella ruminicola 23 9000231 YP_003574372.1 CDS mtgA NC_014033.1 1214242 1214892 R identified by similarity to SP:P46022; match to protein family HMM PF00912; match to protein family HMM TIGR02070; monofunctional biosynthetic peptidoglycan transglycosylase complement(1214242..1214892) Prevotella ruminicola 23 9002216 YP_003574373.1 CDS PRU_1043 NC_014033.1 1214964 1215644 R identified by match to protein family HMM PF00691; match to protein family HMM PF05433; OmpA family protein complement(1214964..1215644) Prevotella ruminicola 23 9001271 YP_003574374.1 CDS PRU_1044 NC_014033.1 1215790 1216857 R identified by similarity to SP:P54965; match to protein family HMM PF02275; match to protein family HMM PF03417; hydrolase domain-containing protein complement(1215790..1216857) Prevotella ruminicola 23 9002625 YP_003574375.1 CDS PRU_1045 NC_014033.1 1217499 1219841 R identified by glimmer; hypothetical protein complement(1217499..1219841) Prevotella ruminicola 23 9002217 YP_003574376.1 CDS PRU_1046 NC_014033.1 1219838 1220209 R identified by glimmer; hypothetical protein complement(1219838..1220209) Prevotella ruminicola 23 9001279 YP_003574377.1 CDS PRU_1047 NC_014033.1 1220326 1220853 R identified by glimmer; hypothetical protein complement(1220326..1220853) Prevotella ruminicola 23 9001984 YP_003574378.1 CDS PRU_1048 NC_014033.1 1220901 1221182 R identified by glimmer; hypothetical protein complement(1220901..1221182) Prevotella ruminicola 23 9002463 YP_003574379.1 CDS PRU_1049 NC_014033.1 1221649 1222950 R identified by glimmer; hypothetical protein complement(1221649..1222950) Prevotella ruminicola 23 9000180 YP_003574380.1 CDS PRU_1050 NC_014033.1 1223412 1223819 D identified by glimmer; hypothetical protein 1223412..1223819 Prevotella ruminicola 23 9000916 YP_003574381.1 CDS PRU_1051 NC_014033.1 1224147 1224623 R hypothetical protein complement(1224147..1224623) Prevotella ruminicola 23 9001406 YP_003574382.1 CDS PRU_1052 NC_014033.1 1225337 1227496 R identified by similarity to GB:BAC70637.1; hypothetical protein complement(1225337..1227496) Prevotella ruminicola 23 9001361 YP_003574383.1 CDS PRU_1053 NC_014033.1 1227726 1230002 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; type III restriction-modification system subunit Res complement(1227726..1230002) Prevotella ruminicola 23 9001816 YP_003574384.1 CDS PRU_1054 NC_014033.1 1230014 1231117 R identified by similarity to SP:Q60377; overlaps another CDS with the same product name; hypothetical protein complement(1230014..1231117) Prevotella ruminicola 23 9002755 YP_003574385.1 CDS PRU_1055 NC_014033.1 1231114 1234338 R identified by similarity to GB:BAD01783.1; overlaps another CDS with the same product name; hypothetical protein complement(1231114..1234338) Prevotella ruminicola 23 9000267 YP_003574386.1 CDS PRU_1056 NC_014033.1 1234322 1235206 R identified by similarity to GB:CAG75774.1; hypothetical protein complement(1234322..1235206) Prevotella ruminicola 23 9000872 YP_003574387.1 CDS PRU_1058 NC_014033.1 1237105 1238538 R identified by match to protein family HMM PF04326; divergent AAA domain-containing protein complement(1237105..1238538) Prevotella ruminicola 23 9000575 YP_003574388.1 CDS PRU_1059 NC_014033.1 1239247 1240059 R identified by glimmer; hypothetical protein complement(1239247..1240059) Prevotella ruminicola 23 9001812 YP_003574389.1 CDS PRU_1060 NC_014033.1 1240563 1241093 D identified by match to protein family HMM TIGR01201; DNA-binding protein 1240563..1241093 Prevotella ruminicola 23 9002424 YP_003574390.1 CDS proS NC_014033.1 1241420 1242901 D identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM PF09180; match to protein family HMM TIGR00408; proline--tRNA ligase 1241420..1242901 Prevotella ruminicola 23 9000663 YP_003574391.1 CDS PRU_1062 NC_014033.1 1243173 1243640 R identified by similarity to GB:AAO79344.1; hypothetical protein complement(1243173..1243640) Prevotella ruminicola 23 9001661 YP_003574392.1 CDS PRU_1063 NC_014033.1 1243637 1244959 R identified by similarity to GB:AAC24333.2; phenylacetate--CoA ligase complement(1243637..1244959) Prevotella ruminicola 23 9002131 YP_003574393.1 CDS PRU_1064 NC_014033.1 1245016 1245711 R identified by match to protein family HMM PF04452; match to protein family HMM TIGR00046; hypothetical protein complement(1245016..1245711) Prevotella ruminicola 23 9001684 YP_003574394.1 CDS PRU_1065 NC_014033.1 1245758 1247068 R identified by similarity to SP:P09452; match to protein family HMM PF03825; nucleoside transport family protein complement(1245758..1247068) Prevotella ruminicola 23 9000873 YP_003574395.1 CDS PRU_1066 NC_014033.1 1247092 1247973 R identified by similarity to GB:AAO75916.1; hypothetical protein complement(1247092..1247973) Prevotella ruminicola 23 9002008 YP_003574396.1 CDS PRU_1067 NC_014033.1 1248011 1248625 R identified by similarity to SP:Q45479; lipoprotein signal peptidase complement(1248011..1248625) Prevotella ruminicola 23 9001322 YP_003574397.1 CDS PRU_1068 NC_014033.1 1248655 1249035 R identified by similarity to PIR:A81676; hypothetical protein complement(1248655..1249035) Prevotella ruminicola 23 9000716 YP_003574398.1 CDS ileS NC_014033.1 1249066 1252626 R identified by similarity to SP:P41368; match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00392; isoleucine--tRNA ligase complement(1249066..1252626) Prevotella ruminicola 23 9002590 YP_003574399.1 CDS dcuB NC_014033.1 1252846 1254279 D identified by similarity to SP:P14409; match to protein family HMM PF03600; match to protein family HMM PF03605; match to protein family HMM TIGR00770; anaerobic C4-dicarboxylate membrane transporter DcuB 1252846..1254279 Prevotella ruminicola 23 8999977 YP_003574400.1 CDS PRU_1071 NC_014033.1 1254338 1256083 R identified by match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; phosphoglucomutase/phosphomannomutase family protein complement(1254338..1256083) Prevotella ruminicola 23 9002004 YP_003574401.1 CDS PRU_1072 NC_014033.1 1256210 1257343 R identified by similarity to GB:AAO76007.1; hypothetical protein complement(1256210..1257343) Prevotella ruminicola 23 9002484 YP_003574402.1 CDS PRU_1075 NC_014033.1 1258228 1258968 R identified by match to protein family HMM PF01643; acyl-ACP thioesterase family protein complement(1258228..1258968) Prevotella ruminicola 23 9002792 YP_003574403.1 CDS ilvN NC_014033.1 1258961 1259503 R identified by similarity to SP:P37252; match to protein family HMM PF01842; match to protein family HMM TIGR00119; acetolactate synthase small subunit complement(1258961..1259503) Prevotella ruminicola 23 9001232 YP_003574404.1 CDS ilvB NC_014033.1 1259518 1261224 R identified by similarity to GB:AAL99356.1; match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; match to protein family HMM TIGR00118; acetolactate synthase large subunit complement(1259518..1261224) Prevotella ruminicola 23 9000585 YP_003574405.1 CDS ilvD NC_014033.1 1261253 1263055 R identified by similarity to SP:P05791; match to protein family HMM PF00920; match to protein family HMM TIGR00110; dihydroxy-acid dehydratase complement(1261253..1263055) Prevotella ruminicola 23 9001994 YP_003574406.1 CDS PRU_1079 NC_014033.1 1263183 1265636 D identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; family 2 glycosyl hydrolase 1263183..1265636 Prevotella ruminicola 23 9001012 YP_003574407.1 CDS cobD NC_014033.1 1265623 1266543 R identified by similarity to SP:Q05600; match to protein family HMM PF03186; match to protein family HMM TIGR00380; cobalamin biosynthesis protein CobD complement(1265623..1266543) Prevotella ruminicola 23 9000403 YP_003574408.1 CDS cobQ NC_014033.1 1266536 1267957 R identified by similarity to SP:Q05597; match to protein family HMM PF01656; match to protein family HMM PF07685; match to protein family HMM TIGR00313; cobyric acid synthase CobQ complement(1266536..1267957) Prevotella ruminicola 23 9002306 YP_003574409.1 CDS cobJH NC_014033.1 1267954 1269354 R identified by match to protein family HMM PF00590; match to protein family HMM PF02570; match to protein family HMM TIGR01466; precorrin-3B C17-methyltransferase/precorrin-8X methylmutase complement(1267954..1269354) Prevotella ruminicola 23 9000592 YP_003574410.1 CDS PRU_1083 NC_014033.1 1269361 1271424 R identified by similarity to GB:AAB47566.2; match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane receptor (OMR) family transporter complement(1269361..1271424) Prevotella ruminicola 23 8999997 YP_003574411.1 CDS PRU_1084 NC_014033.1 1271444 1272562 R identified by similarity to SP:Q05592; cobalt chelatase complement(1271444..1272562) Prevotella ruminicola 23 9001835 YP_003574412.1 CDS PRU_1085 NC_014033.1 1272591 1274705 R identified by similarity to GB:AAB47566.2; match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane receptor (OMR) family transporter complement(1272591..1274705) Prevotella ruminicola 23 9001246 YP_003574413.1 CDS cobB NC_014033.1 1275032 1276309 D identified by match to protein family HMM PF01656; match to protein family HMM PF07685; match to protein family HMM TIGR00379; cobyrinic acid a,c-diamide synthase 1275032..1276309 Prevotella ruminicola 23 9000233 YP_003574414.1 CDS cobL NC_014033.1 1276306 1277559 D identified by similarity to SP:P21921; match to protein family HMM TIGR02467; match to protein family HMM TIGR02469; precorrin-6Y C5,15-methyltransferase 1276306..1277559 Prevotella ruminicola 23 9001480 YP_003574415.1 CDS cobM NC_014033.1 1277547 1279322 D identified by match to protein family HMM PF00590; match to protein family HMM PF01890; match to protein family HMM TIGR01465; cobalamin biosynthesis protein CbiG/precorrin-4 C11-methyltransferase 1277547..1279322 Prevotella ruminicola 23 9001860 YP_003574416.1 CDS cobKD NC_014033.1 1279319 1281088 D identified by match to protein family HMM PF01888; match to protein family HMM PF02571; match to protein family HMM TIGR00312; precorrin-6x reductase/cobalamin biosynthetic protein CbiD 1279319..1281088 Prevotella ruminicola 23 9000661 YP_003574417.1 CDS PRU_1090 NC_014033.1 1281012 1282031 R identified by similarity to GB:AAD37494.1; match to protein family HMM PF01032; iron compound ABC transporter permease complement(1281012..1282031) Prevotella ruminicola 23 9002025 YP_003574418.1 CDS PRU_1091 NC_014033.1 1282028 1283131 R identified by match to protein family HMM PF01497; iron compound ABC transporter periplasmic iron compound-binding protein complement(1282028..1283131) Prevotella ruminicola 23 9001042 YP_003574419.1 CDS cobS NC_014033.1 1283208 1283987 D identified by match to protein family HMM PF02654; cobalamin-5-phosphate synthase 1283208..1283987 Prevotella ruminicola 23 9000131 YP_003574420.1 CDS cobP NC_014033.1 1283975 1284493 D identified by similarity to SP:P29931; match to protein family HMM PF02283; cobinamide kinase/cobinamide phosphate guanylyltransferase 1283975..1284493 Prevotella ruminicola 23 9001986 YP_003574421.1 CDS cobT NC_014033.1 1284508 1285593 D identified by similarity to SP:Q05603; match to protein family HMM PF02277; match to protein family HMM TIGR03160; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 1284508..1285593 Prevotella ruminicola 23 9001706 YP_003574422.1 CDS mdsD_2 NC_014033.1 1285590 1288805 R identified by similarity to GB:AAF72523.1; match to protein family HMM PF03572; match to protein family HMM PF07676; mucin-desulfating sulfatase complement(1285590..1288805) Prevotella ruminicola 23 9000665 YP_003574423.1 CDS PRU_1096 NC_014033.1 1288948 1289694 D identified by similarity to SP:P87051; match to protein family HMM PF00160; peptidyl-prolyl cis-trans isomerase 1288948..1289694 Prevotella ruminicola 23 9002270 YP_003574424.1 CDS PRU_1097 NC_014033.1 1289847 1290251 D identified by similarity to SP:Q58156; match to protein family HMM PF02915; hypothetical protein 1289847..1290251 Prevotella ruminicola 23 9001629 YP_003574425.1 CDS PRU_1098 NC_014033.1 1290258 1291364 D identified by similarity to GB:AAR33578.1; match to protein family HMM PF04055; Fe-S oxidoreductase 1290258..1291364 Prevotella ruminicola 23 9001049 YP_003574426.1 CDS PRU_1099 NC_014033.1 1291385 1291702 R identified by similarity to SP:Q8A295; match to protein family HMM PF01906; hypothetical protein complement(1291385..1291702) Prevotella ruminicola 23 9000368 YP_003574427.1 CDS PRU_1100 NC_014033.1 1291725 1292825 R identified by glimmer; hypothetical protein complement(1291725..1292825) Prevotella ruminicola 23 9001088 YP_003574428.1 CDS PRU_1101 NC_014033.1 1293041 1294594 D identified by match to protein family HMM PF01095; pectinesterase 1293041..1294594 Prevotella ruminicola 23 9000462 YP_003574429.1 CDS eno NC_014033.1 1294691 1295998 R identified by similarity to SP:P37869; match to protein family HMM PF00113; match to protein family HMM PF03952; match to protein family HMM TIGR01060; phosphopyruvate hydratase complement(1294691..1295998) Prevotella ruminicola 23 9001650 YP_003574430.1 CDS PRU_1103 NC_014033.1 1296153 1298219 R identified by similarity to GB:AAG23395.1; match to protein family HMM PF00593; match to protein family HMM PF07715; TonB-dependent heme receptor complement(1296153..1298219) Prevotella ruminicola 23 9000690 YP_003574431.1 CDS PRU_1104 NC_014033.1 1298376 1298759 R identified by similarity to GB:AAO76528.1; hypothetical protein complement(1298376..1298759) Prevotella ruminicola 23 9000077 YP_003574432.1 CDS PRU_1105 NC_014033.1 1298805 1300781 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(1298805..1300781) Prevotella ruminicola 23 9002564 YP_003574433.1 CDS PRU_1106 NC_014033.1 1301154 1302383 D identified by match to protein family HMM PF00589; site-specific recombinase, phage integrase family 1301154..1302383 Prevotella ruminicola 23 9002007 YP_003574434.1 CDS PRU_1107 NC_014033.1 1302827 1305646 R identified by match to protein family HMM PF01896; match to protein family HMM PF04851; type III restriction-modification system subunit Res complement(1302827..1305646) Prevotella ruminicola 23 9001090 YP_003574435.1 CDS PRU_1108 NC_014033.1 1305679 1306671 R identified by similarity to GB:CAF23213.1; match to protein family HMM PF08843; hypothetical protein complement(1305679..1306671) Prevotella ruminicola 23 9002233 YP_003574436.1 CDS PRU_1109 NC_014033.1 1306706 1307311 R identified by similarity to GB:CAF23214.1; hypothetical protein complement(1306706..1307311) Prevotella ruminicola 23 9001695 YP_003574437.1 CDS PRU_1110 NC_014033.1 1307517 1307828 R DNA binding protein, excisionase family complement(1307517..1307828) Prevotella ruminicola 23 9000116 YP_003574438.1 CDS PRU_1111 NC_014033.1 1307860 1308201 R identified by similarity to GB:AAO78246.1; hypothetical protein complement(1307860..1308201) Prevotella ruminicola 23 9001962 YP_003574439.1 CDS PRU_1112 NC_014033.1 1309361 1309888 D identified by similarity to GB:AAO79123.1; hypothetical protein 1309361..1309888 Prevotella ruminicola 23 9002422 YP_003574440.1 CDS PRU_1113 NC_014033.1 1310096 1310485 D identified by similarity to GB:AAO79726.1; mobilization protein 1310096..1310485 Prevotella ruminicola 23 9000547 YP_003574441.1 CDS PRU_1114 NC_014033.1 1310584 1311468 D identified by similarity to GB:AAA98401.1; match to protein family HMM PF03432; mobilization protein 1310584..1311468 Prevotella ruminicola 23 8999982 YP_003574442.1 CDS PRU_1115 NC_014033.1 1311619 1313682 R identified by similarity to GB:AAO75603.1; hypothetical protein complement(1311619..1313682) Prevotella ruminicola 23 9000376 YP_003574443.1 CDS PRU_1116 NC_014033.1 1313682 1314965 R identified by match to protein family HMM PF04055; arylsulfatase-activating enzyme AtsB complement(1313682..1314965) Prevotella ruminicola 23 9001176 YP_003574444.1 CDS PRU_1117 NC_014033.1 1315324 1317816 R identified by similarity to GB:AAQ65640.1; hypothetical protein complement(1315324..1317816) Prevotella ruminicola 23 9001666 YP_003574445.1 CDS PRU_1118 NC_014033.1 1317813 1318532 R identified by similarity to GB:AAQ66890.1; match to protein family HMM PF09697; hypothetical protein complement(1317813..1318532) Prevotella ruminicola 23 9002068 YP_003574446.1 CDS PRU_1120 NC_014033.1 1319046 1320338 R identified by similarity to SP:P16534; toxin secretion protein complement(1319046..1320338) Prevotella ruminicola 23 9000031 YP_003574447.1 CDS PRU_1121 NC_014033.1 1320345 1322546 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM PF03412; peptide ABC transporter permease/ATP-binding protein complement(1320345..1322546) Prevotella ruminicola 23 9002677 YP_003574448.1 CDS PRU_1122 NC_014033.1 1322543 1323913 R identified by match to protein family HMM PF07884; hypothetical protein complement(1322543..1323913) Prevotella ruminicola 23 9002608 YP_003574449.1 CDS PRU_1123 NC_014033.1 1324388 1326163 R identified by similarity to GB:AAO78326.1; lipoprotein complement(1324388..1326163) Prevotella ruminicola 23 9000574 YP_003574450.1 CDS PRU_1124 NC_014033.1 1326574 1327851 R identified by similarity to GB:AAQ66048.1; match to protein family HMM PF06354; hypothetical protein complement(1326574..1327851) Prevotella ruminicola 23 9002246 YP_003574451.1 CDS PRU_1125 NC_014033.1 1327937 1328452 R identified by match to protein family HMM PF02525; match to protein family HMM PF03358; cytochrome c family protein complement(1327937..1328452) Prevotella ruminicola 23 9000101 YP_003574452.1 CDS PRU_1126 NC_014033.1 1328491 1328952 R identified by match to protein family HMM PF00583; GNAT family acetyltransferase complement(1328491..1328952) Prevotella ruminicola 23 9000664 YP_003574453.1 CDS PRU_1127 NC_014033.1 1329026 1330255 R identified by match to protein family HMM PF00403; match to protein family HMM PF03773; permease complement(1329026..1330255) Prevotella ruminicola 23 9002046 YP_003574454.1 CDS PRU_1128 NC_014033.1 1330277 1331380 R identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation diffusion facilitator family transporter complement(1330277..1331380) Prevotella ruminicola 23 9002572 YP_003574455.1 CDS PRU_1129 NC_014033.1 1331392 1331958 R identified by match to protein family HMM PF00132; O-acetyltransferase complement(1331392..1331958) Prevotella ruminicola 23 9000390 YP_003574456.1 CDS PRU_1130 NC_014033.1 1332118 1332603 R identified by similarity to SP:P00806; match to protein family HMM PF01510; N-acetylmuramoyl-L-alanine amidase complement(1332118..1332603) Prevotella ruminicola 23 9001086 YP_003574457.1 CDS PRU_1131 NC_014033.1 1333136 1333714 R identified by match to protein family HMM TIGR01201; histone-like DNA-binding protein complement(1333136..1333714) Prevotella ruminicola 23 9002368 YP_003574458.1 CDS PRU_1132 NC_014033.1 1334105 1335451 D identified by similarity to SP:P04539; match to protein family HMM PF03605; match to protein family HMM TIGR00770; C4-dicarboxylate uptake family transporter 1334105..1335451 Prevotella ruminicola 23 9000032 YP_003574459.1 CDS PRU_1133 NC_014033.1 1335473 1335688 R identified by similarity to GB:AAO77095.1; hypothetical protein complement(1335473..1335688) Prevotella ruminicola 23 9000668 YP_003574460.1 CDS PRU_1134 NC_014033.1 1335875 1338154 R identified by similarity to GB:AAO79839.1; hypothetical protein complement(1335875..1338154) Prevotella ruminicola 23 9002494 YP_003574461.1 CDS PRU_1135 NC_014033.1 1339216 1341987 D identified by similarity to GB:CAE14722.1; hypothetical protein 1339216..1341987 Prevotella ruminicola 23 9000494 YP_003574462.1 CDS PRU_1138 NC_014033.1 1342884 1343663 R identified by glimmer; hypothetical protein complement(1342884..1343663) Prevotella ruminicola 23 9000961 YP_003574463.1 CDS PRU_1139 NC_014033.1 1344961 1348695 D identified by glimmer; hypothetical protein 1344961..1348695 Prevotella ruminicola 23 9000215 YP_003574464.1 CDS PRU_1140 NC_014033.1 1348812 1349831 R identified by match to protein family HMM PF04616; family 43 glycosyl hydrolase complement(1348812..1349831) Prevotella ruminicola 23 9001943 YP_003574465.1 CDS panE NC_014033.1 1350364 1351281 D identified by match to protein family HMM PF02558; match to protein family HMM PF08546; match to protein family HMM TIGR00745; 2-dehydropantoate 2-reductase 1350364..1351281 Prevotella ruminicola 23 9002663 YP_003574466.1 CDS PRU_1145 NC_014033.1 1352343 1352747 D identified by similarity to GB:AAO78874.1; hypothetical protein 1352343..1352747 Prevotella ruminicola 23 9000372 YP_003574467.1 CDS PRU_1146 NC_014033.1 1352794 1354173 R identified by similarity to SP:P22783; match to protein family HMM PF00459; match to protein family HMM PF01966; inositol-1-monophosphatase/HD domain-containing protein complement(1352794..1354173) Prevotella ruminicola 23 9002389 YP_003574468.1 CDS PRU_1147 NC_014033.1 1354174 1354719 R identified by match to protein family HMM PF01558; keto/oxoacid ferredoxin oxidoreductase subunit gamma complement(1354174..1354719) Prevotella ruminicola 23 9001797 YP_003574469.1 CDS PRU_1149 NC_014033.1 1355641 1356726 R identified by similarity to GB:AAC38211.1; match to protein family HMM PF01855; match to protein family HMM PF02780; keto/oxoacid ferredoxin oxidoreductase subunit alpha complement(1355641..1356726) Prevotella ruminicola 23 9000223 YP_003574470.1 CDS PRU_1150 NC_014033.1 1356729 1356950 R identified by similarity to GB:AAC38210.1; match to protein family HMM PF00037; ferridoxin oxidoreductase, 4Fe-4S binding subunit complement(1356729..1356950) Prevotella ruminicola 23 9001300 YP_003574471.1 CDS PRU_1151 NC_014033.1 1356973 1357152 R identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein complement(1356973..1357152) Prevotella ruminicola 23 9001552 YP_003574472.1 CDS folD NC_014033.1 1357183 1358061 R identified by similarity to SP:P54382; match to protein family HMM PF00763; match to protein family HMM PF02882; bifunctional protein FolD complement(1357183..1358061) Prevotella ruminicola 23 9002551 YP_003574473.1 CDS ffh NC_014033.1 1358073 1359434 R identified by similarity to SP:P37105; match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein complement(1358073..1359434) Prevotella ruminicola 23 9002320 YP_003574474.1 CDS PRU_1154 NC_014033.1 1359492 1360124 R identified by similarity to GB:AAK02429.1; match to protein family HMM PF02677; hypothetical protein complement(1359492..1360124) Prevotella ruminicola 23 9002536 YP_003574475.1 CDS PRU_1155 NC_014033.1 1360116 1361375 D identified by similarity to SP:P31958; match to protein family HMM PF02585; dehydrogenase domain-containing protein 1360116..1361375 Prevotella ruminicola 23 9001995 YP_003574476.1 CDS PRU_1156 NC_014033.1 1361425 1363047 D identified by match to protein family HMM PF00728; family 20 glycosyl hydrolase 1361425..1363047 Prevotella ruminicola 23 9001339 YP_003574477.1 CDS PRU_1157 NC_014033.1 1363077 1365329 D identified by similarity to SP:P49008; match to protein family HMM PF00728; match to protein family HMM PF07691; beta-N-acetylhexosaminidase 1363077..1365329 Prevotella ruminicola 23 9000041 YP_003574478.1 CDS PRU_1158 NC_014033.1 1365371 1366849 R identified by similarity to GB:AAO78634.1; match to protein family HMM PF06824; hypothetical protein complement(1365371..1366849) Prevotella ruminicola 23 9002088 YP_003574479.1 CDS PRU_1159 NC_014033.1 1366877 1369054 R identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; alpha-1,2-mannosidase family protein complement(1366877..1369054) Prevotella ruminicola 23 9001657 YP_003574480.1 CDS PRU_1160 NC_014033.1 1369291 1372653 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB dependent receptor 1369291..1372653 Prevotella ruminicola 23 9000880 YP_003574481.1 CDS PRU_1161 NC_014033.1 1372703 1374418 D lipoprotein 1372703..1374418 Prevotella ruminicola 23 9002525 YP_003574482.1 CDS PRU_1162 NC_014033.1 1374456 1378037 D identified by similarity to GB:CAB53341.1; match to protein family HMM PF00704; match to protein family HMM PF05592; match to protein family HMM PF08531; glycolsyl hydrolase, family 18/alpha-rhamnosidase 1374456..1378037 Prevotella ruminicola 23 9000714 YP_003574483.1 CDS PRU_1163 NC_014033.1 1378093 1381677 R identified by match to protein family HMM PF00703; match to protein family HMM PF00754; match to protein family HMM PF02837; DS domain/family 2 glycosyl hydrolase complement(1378093..1381677) Prevotella ruminicola 23 9002729 YP_003574484.1 CDS PRU_1164 NC_014033.1 1381739 1383109 D identified by match to protein family HMM PF01120; alpha-L-fucosidase family protein 1381739..1383109 Prevotella ruminicola 23 9000485 YP_003574485.1 CDS PRU_1165 NC_014033.1 1383172 1385412 D identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; alpha-1,2-mannosidase family protein 1383172..1385412 Prevotella ruminicola 23 9001112 YP_003574486.1 CDS PRU_1166 NC_014033.1 1385424 1387229 D identified by similarity to GB:AAS19690.1; match to protein family HMM PF00754; DS domain-containing protein 1385424..1387229 Prevotella ruminicola 23 9001122 YP_003574487.1 CDS PRU_1167 NC_014033.1 1387232 1389580 D identified by match to protein family HMM PF00933; match to protein family HMM PF01915; family 3 glycosyl hydrolase 1387232..1389580 Prevotella ruminicola 23 9001743 YP_003574488.1 CDS PRU_1168 NC_014033.1 1389581 1391764 D identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; alpha-1,2-mannosidase family protein 1389581..1391764 Prevotella ruminicola 23 9002746 YP_003574489.1 CDS PRU_1169 NC_014033.1 1391821 1392492 D identified by similarity to SP:P46719; match to protein family HMM PF03932; copper homeostasis protein 1391821..1392492 Prevotella ruminicola 23 9002109 YP_003574490.1 CDS PRU_1170 NC_014033.1 1392476 1394884 R identified by match to protein family HMM PF01841; transglutaminase-like protein complement(1392476..1394884) Prevotella ruminicola 23 9000544 YP_003574491.1 CDS tyrA NC_014033.1 1394898 1395692 R identified by match to protein family HMM PF02153; prephenate dehydrogenase complement(1394898..1395692) Prevotella ruminicola 23 9002533 YP_003574492.1 CDS PRU_1172 NC_014033.1 1395788 1396852 R identified by match to protein family HMM PF00793; match to protein family HMM PF01817; phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase complement(1395788..1396852) Prevotella ruminicola 23 9000502 YP_003574493.1 CDS PRU_1173 NC_014033.1 1396881 1398047 R identified by match to protein family HMM PF00155; class I/II aminotransferase complement(1396881..1398047) Prevotella ruminicola 23 9001976 YP_003574494.1 CDS PRU_1174 NC_014033.1 1398111 1398953 R identified by similarity to SP:P07022; match to protein family HMM PF00800; prephenate dehydratase complement(1398111..1398953) Prevotella ruminicola 23 9000065 YP_003574495.1 CDS PRU_1175 NC_014033.1 1399270 1401795 R identified by glimmer; hypothetical protein complement(1399270..1401795) Prevotella ruminicola 23 9002391 YP_003574496.1 CDS PRU_1176 NC_014033.1 1401753 1402211 R identified by glimmer; hypothetical protein complement(1401753..1402211) Prevotella ruminicola 23 9000930 YP_003574497.1 CDS PRU_1177 NC_014033.1 1402214 1402507 R identified by glimmer; hypothetical protein complement(1402214..1402507) Prevotella ruminicola 23 9001107 YP_003574498.1 CDS PRU_1179 NC_014033.1 1403459 1404544 R identified by similarity to SP:O67591; hypothetical protein complement(1403459..1404544) Prevotella ruminicola 23 9000308 YP_003574499.1 CDS PRU_1181 NC_014033.1 1405044 1405343 D identified by similarity to PIR:G71368; hypothetical protein 1405044..1405343 Prevotella ruminicola 23 9001294 YP_003574500.1 CDS PRU_1182 NC_014033.1 1405385 1405759 D identified by similarity to SP:P06224; sigma factor domain-containing protein 1405385..1405759 Prevotella ruminicola 23 9002487 YP_003574501.1 CDS PRU_1183 NC_014033.1 1405894 1406379 R identified by similarity to GB:CAD76076.1; hypothetical protein complement(1405894..1406379) Prevotella ruminicola 23 9000217 YP_003574502.1 CDS PRU_1184 NC_014033.1 1406386 1406754 R identified by match to protein family HMM PF03733; hypothetical protein complement(1406386..1406754) Prevotella ruminicola 23 9001752 YP_003574503.1 CDS umuD_2 NC_014033.1 1406858 1407310 D identified by similarity to SP:P04153; match to protein family HMM PF00717; UmuD protein 1406858..1407310 Prevotella ruminicola 23 9002496 YP_003574504.1 CDS PRU_1186 NC_014033.1 1407295 1408587 D identified by match to protein family HMM PF00817; ImpB/MucB/SamB family protein 1407295..1408587 Prevotella ruminicola 23 9002177 YP_003574505.1 CDS PRU_1187 NC_014033.1 1408999 1409568 D identified by match to protein family HMM TIGR01201; histone-like DNA-binding protein 1408999..1409568 Prevotella ruminicola 23 9001204 YP_003574506.1 CDS PRU_1188 NC_014033.1 1409945 1410436 D identified by match to protein family HMM PF00929; exonuclease 1409945..1410436 Prevotella ruminicola 23 9001708 YP_003574507.1 CDS PRU_1189 NC_014033.1 1410531 1410686 D identified by glimmer; hypothetical protein 1410531..1410686 Prevotella ruminicola 23 9002135 YP_003574508.1 CDS PRU_1190 NC_014033.1 1410692 1411399 D identified by glimmer; hypothetical protein 1410692..1411399 Prevotella ruminicola 23 9000461 YP_003574509.1 CDS atpG NC_014033.1 1411452 1412426 R identified by match to protein family HMM PF00231; match to protein family HMM TIGR01146; ATP synthase F1 subunit gamma complement(1411452..1412426) Prevotella ruminicola 23 9002583 YP_003574510.1 CDS atpA NC_014033.1 1412433 1414019 R identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; match to protein family HMM PF09378; match to protein family HMM TIGR00962; ATP synthase F1 subunit alpha complement(1412433..1414019) Prevotella ruminicola 23 9000209 YP_003574511.1 CDS atpH NC_014033.1 1414026 1414562 R identified by match to protein family HMM PF00213; match to protein family HMM TIGR01145; ATP synthase F1 subunit delta complement(1414026..1414562) Prevotella ruminicola 23 9000822 YP_003574512.1 CDS atpF NC_014033.1 1414574 1415089 R identified by match to protein family HMM PF00430; match to protein family HMM TIGR01144; ATP synthase F0 subunit B complement(1414574..1415089) Prevotella ruminicola 23 9002409 YP_003574513.1 CDS atpE NC_014033.1 1415144 1415383 R identified by match to protein family HMM PF00137; ATP synthase F0 subunit C complement(1415144..1415383) Prevotella ruminicola 23 9002318 YP_003574514.1 CDS atpB NC_014033.1 1415455 1416480 R identified by match to protein family HMM PF00119; match to protein family HMM TIGR01131; ATP synthase F0 subunit A complement(1415455..1416480) Prevotella ruminicola 23 9001304 YP_003574515.1 CDS PRU_1197 NC_014033.1 1416517 1416909 R hypothetical protein complement(1416517..1416909) Prevotella ruminicola 23 9001927 YP_003574516.1 CDS PRU_1198 NC_014033.1 1416925 1417167 R identified by similarity to SP:P35111; match to protein family HMM PF02823; ATP synthase F1 subunit epsilon complement(1416925..1417167) Prevotella ruminicola 23 9000633 YP_003574517.1 CDS atpD NC_014033.1 1417200 1418726 R identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; match to protein family HMM TIGR01039; ATP synthase F1 subunit beta complement(1417200..1418726) Prevotella ruminicola 23 9000878 YP_003574518.1 CDS PRU_1200 NC_014033.1 1418858 1419898 R identified by similarity to GB:AAK92870.1; hypothetical protein complement(1418858..1419898) Prevotella ruminicola 23 9000066 YP_003574519.1 CDS pfkA NC_014033.1 1420020 1420997 R identified by similarity to SP:P00512; match to protein family HMM PF00365; match to protein family HMM TIGR02482; 6-phosphofructokinase complement(1420020..1420997) Prevotella ruminicola 23 9000754 YP_003574520.1 CDS PRU_1202 NC_014033.1 1421019 1422410 R identified by similarity to GB:BAA25994.1; match to protein family HMM PF03600; NhaD sodium:hydrogen antiporter family sodium transporter complement(1421019..1422410) Prevotella ruminicola 23 9001530 YP_003574521.1 CDS PRU_1203 NC_014033.1 1422424 1424247 R identified by match to protein family HMM PF00497; match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(1422424..1424247) Prevotella ruminicola 23 9002363 YP_003574522.1 CDS PRU_1204 NC_014033.1 1424360 1425160 R identified by similarity to SP:Q45885; match to protein family HMM PF00226; DnaJ-like protein DjlA complement(1424360..1425160) Prevotella ruminicola 23 9000432 YP_003574523.1 CDS maf NC_014033.1 1425167 1425742 R identified by similarity to SP:Q02169; match to protein family HMM PF02545; match to protein family HMM TIGR00172; maf protein complement(1425167..1425742) Prevotella ruminicola 23 9001263 YP_003574524.1 CDS kdsC NC_014033.1 1425785 1426303 R identified by similarity to SP:P45396; match to protein family HMM TIGR01670; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(1425785..1426303) Prevotella ruminicola 23 9002054 YP_003574525.1 CDS PRU_1207 NC_014033.1 1426377 1426904 R identified by match to protein family HMM PF00881; nitroreductase family protein complement(1426377..1426904) Prevotella ruminicola 23 9000701 YP_003574526.1 CDS PRU_1208 NC_014033.1 1426994 1428019 D identified by similarity to GB:AAO76791.1; hypothetical protein 1426994..1428019 Prevotella ruminicola 23 9001494 YP_003574527.1 CDS PRU_1209 NC_014033.1 1428020 1428316 R identified by similarity to PIR:H83688; lipoprotein complement(1428020..1428316) Prevotella ruminicola 23 9002308 YP_003574528.1 CDS PRU_1210 NC_014033.1 1428334 1430406 R identified by similarity to SP:P11585; match to protein family HMM PF02824; match to protein family HMM PF04607; GTP diphosphokinase complement(1428334..1430406) Prevotella ruminicola 23 9002406 YP_003574529.1 CDS PRU_1211 NC_014033.1 1430533 1432014 D identified by similarity to GB:AAQ66299.1; hypothetical protein 1430533..1432014 Prevotella ruminicola 23 9001445 YP_003574530.1 CDS PRU_1212 NC_014033.1 1432280 1432903 R identified by match to protein family HMM PF00440; TetR family transcriptional regulator complement(1432280..1432903) Prevotella ruminicola 23 9002199 YP_003574531.1 CDS gdhA NC_014033.1 1435558 1436895 D identified by similarity to SP:P95544; match to protein family HMM PF00208; match to protein family HMM PF02812; glutamate dehydrogenase, NADP-specific 1435558..1436895 Prevotella ruminicola 23 9001858 YP_003574532.1 CDS rpsA NC_014033.1 1437251 1439029 D identified by match to protein family HMM PF00575; 30S ribosomal protein S1 1437251..1439029 Prevotella ruminicola 23 9001500 YP_003574533.1 CDS htpG NC_014033.1 1439624 1441678 D identified by similarity to GB:AAD51118.1; match to protein family HMM PF00183; match to protein family HMM PF02518; chaperone protein HtpG 1439624..1441678 Prevotella ruminicola 23 9000612 YP_003574534.1 CDS PRU_1217 NC_014033.1 1441729 1443636 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; overlaps another CDS with the same product name; sensor histidine kinase complement(1441729..1443636) Prevotella ruminicola 23 9001188 YP_003574535.1 CDS PRU_1218 NC_014033.1 1443629 1445110 R identified by match to protein family HMM PF00672; match to protein family HMM PF02743; overlaps another CDS with the same product name; sensor histidine kinase complement(1443629..1445110) Prevotella ruminicola 23 9000914 YP_003574536.1 CDS PRU_1219 NC_014033.1 1445113 1446000 R hypothetical protein complement(1445113..1446000) Prevotella ruminicola 23 9002162 YP_003574537.1 CDS PRU_1220 NC_014033.1 1446212 1446964 R identified by match to protein family HMM PF00140; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; RNA polymerase sigma-70 factor complement(1446212..1446964) Prevotella ruminicola 23 8999987 YP_003574538.1 CDS PRU_1223 NC_014033.1 1447268 1448152 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(1447268..1448152) Prevotella ruminicola 23 9002768 YP_003574539.1 CDS dapA NC_014033.1 1448156 1449043 R identified by similarity to SP:Q04796; match to protein family HMM PF00701; match to protein family HMM TIGR00674; dihydrodipicolinate synthase complement(1448156..1449043) Prevotella ruminicola 23 9001857 YP_003574540.1 CDS PRU_1225 NC_014033.1 1449061 1450014 R identified by match to protein family HMM PF01145; SPFH/Band 7 domain-containing protein complement(1449061..1450014) Prevotella ruminicola 23 9001093 YP_003574541.1 CDS PRU_1226 NC_014033.1 1450057 1450491 R identified by similarity to GB:AAB85198.1; match to protein family HMM PF01957; hypothetical protein complement(1450057..1450491) Prevotella ruminicola 23 9001957 YP_003574542.1 CDS PRU_1227 NC_014033.1 1450513 1452846 R identified by similarity to SP:P43158; match to protein family HMM PF01640; thiol protease/hemagglutinin prtT complement(1450513..1452846) Prevotella ruminicola 23 9001517 YP_003574543.1 CDS PRU_1228 NC_014033.1 1453054 1455321 D identified by similarity to GB:AAQ65726.1; match to protein family HMM PF00593; hypothetical protein 1453054..1455321 Prevotella ruminicola 23 9001270 YP_003574544.1 CDS PRU_1229 NC_014033.1 1455443 1457998 D lipoprotein 1455443..1457998 Prevotella ruminicola 23 9000635 YP_003574545.1 CDS PRU_1230 NC_014033.1 1458152 1458562 D identified by match to protein family HMM PF00903; match to protein family HMM TIGR03081; glyoxalase family protein 1458152..1458562 Prevotella ruminicola 23 9001669 YP_003574546.1 CDS PRU_1231 NC_014033.1 1458605 1460170 D identified by match to protein family HMM PF01039; carboxyl transferase domain-containing protein 1458605..1460170 Prevotella ruminicola 23 9001805 YP_003574547.1 CDS PRU_1232 NC_014033.1 1460300 1460770 D identified by match to protein family HMM PF00364; biotin carboxyl carrier protein 1460300..1460770 Prevotella ruminicola 23 9000006 YP_003574548.1 CDS PRU_1233 NC_014033.1 1460850 1461962 R identified by similarity to GB:BAD50071.1; hypothetical protein complement(1460850..1461962) Prevotella ruminicola 23 9002617 YP_003574549.1 CDS PRU_1234 NC_014033.1 1462026 1463219 D identified by similarity to GB:AAQ65739.1; hypothetical protein 1462026..1463219 Prevotella ruminicola 23 9001563 YP_003574550.1 CDS nifJ NC_014033.1 1463288 1466863 D identified by similarity to GB:CAA70873.1; match to protein family HMM PF00037; match to protein family HMM PF01558; match to protein family HMM PF01855; match to protein family HMM TIGR02175; match to protein family HMM TIGR02176; pyruvate:ferredoxin (flavodoxin) oxidoreductase 1463288..1466863 Prevotella ruminicola 23 9000765 YP_003574551.1 CDS PRU_1236 NC_014033.1 1466933 1468054 D identified by similarity to GB:AAO76946.1; hypothetical protein 1466933..1468054 Prevotella ruminicola 23 9002374 YP_003574552.1 CDS PRU_1237 NC_014033.1 1468061 1468957 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(1468061..1468957) Prevotella ruminicola 23 9002118 YP_003574553.1 CDS PRU_1238 NC_014033.1 1469220 1469510 D identified by glimmer; hypothetical protein 1469220..1469510 Prevotella ruminicola 23 9000181 YP_003574554.1 CDS PRU_1239 NC_014033.1 1469531 1470817 D identified by similarity to GB:AAT82423.1; match to protein family HMM PF06738; hypothetical protein 1469531..1470817 Prevotella ruminicola 23 9001138 YP_003574555.1 CDS PRU_1240 NC_014033.1 1470898 1472883 D identified by match to protein family HMM PF00486; match to protein family HMM PF02690; match to protein family HMM TIGR00704; phosphate:sodium symporter (PNaS) family transporter 1470898..1472883 Prevotella ruminicola 23 9001302 YP_003574556.1 CDS PRU_1241 NC_014033.1 1473043 1473492 D identified by similarity to GB:BAD47579.1; hypothetical protein 1473043..1473492 Prevotella ruminicola 23 9001733 YP_003574557.1 CDS PRU_1242 NC_014033.1 1473622 1475019 D identified by match to protein family HMM PF00331; family 10 glycosyl hydrolase 1473622..1475019 Prevotella ruminicola 23 9001455 YP_003574558.1 CDS pflB NC_014033.1 1475150 1477396 D identified by similarity to SP:P09373; match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01255; formate C-acetyltransferase 1475150..1477396 Prevotella ruminicola 23 9002206 YP_003574559.1 CDS pflA NC_014033.1 1477396 1478133 D identified by similarity to SP:O68575; match to protein family HMM PF04055; match to protein family HMM TIGR02493; pyruvate formate-lyase activating enzyme 1477396..1478133 Prevotella ruminicola 23 9000960 YP_003574560.1 CDS nqrF NC_014033.1 1478193 1479461 R identified by similarity to SP:Q56584; match to protein family HMM PF00111; match to protein family HMM PF00175; match to protein family HMM PF00970; match to protein family HMM TIGR01941; NADH:ubiquinone oxidoreductase F subunit complement(1478193..1479461) Prevotella ruminicola 23 9001430 YP_003574561.1 CDS nqrE NC_014033.1 1479491 1480117 R identified by similarity to SP:Q56589; match to protein family HMM PF02508; match to protein family HMM TIGR01940; NADH:ubiquinone oxidoreductase E subunit complement(1479491..1480117) Prevotella ruminicola 23 9002503 YP_003574562.1 CDS nqrD NC_014033.1 1480121 1480744 R identified by similarity to GB:BAA22913.1; match to protein family HMM PF02508; match to protein family HMM TIGR01939; NADH:ubiquinone oxidoreductase D subunit complement(1480121..1480744) Prevotella ruminicola 23 9001058 YP_003574563.1 CDS nqrC NC_014033.1 1480748 1481416 R identified by match to protein family HMM PF04205; match to protein family HMM TIGR01938; NADH:ubiquinone oxidoreductase Na(+)-translocating subunit C complement(1480748..1481416) Prevotella ruminicola 23 9002049 YP_003574564.1 CDS nqrB NC_014033.1 1481413 1482573 R identified by similarity to GB:BAA22911.1; match to protein family HMM PF03116; match to protein family HMM TIGR01937; NADH:ubiquinone oxidoreductase subunit B complement(1481413..1482573) Prevotella ruminicola 23 9002649 YP_003574565.1 CDS nqrA NC_014033.1 1482601 1483935 R identified by match to protein family HMM PF05896; match to protein family HMM TIGR01936; NADH:ubiquinone oxidoreductase Na(+)-translocating subunit A complement(1482601..1483935) Prevotella ruminicola 23 9000798 YP_003574566.1 CDS PRU_1251 NC_014033.1 1484068 1488510 D identified by similarity to GB:AAQ67053.1; hypothetical protein 1484068..1488510 Prevotella ruminicola 23 9001228 YP_003574567.1 CDS PRU_1252 NC_014033.1 1488624 1489541 R identified by similarity to GB:AAO79343.1; match to protein family HMM PF00892; hypothetical protein complement(1488624..1489541) Prevotella ruminicola 23 9001779 YP_003574568.1 CDS truA NC_014033.1 1489585 1490319 R identified by match to protein family HMM PF01416; match to protein family HMM TIGR00071; tRNA pseudouridine synthase A complement(1489585..1490319) Prevotella ruminicola 23 9002552 YP_003574569.1 CDS PRU_1254 NC_014033.1 1490313 1490906 R identified by glimmer; hypothetical protein complement(1490313..1490906) Prevotella ruminicola 23 9001166 YP_003574570.1 CDS PRU_1255 NC_014033.1 1490909 1492114 R identified by similarity to GB:AAO79007.1; match to protein family HMM PF01061; overlaps another CDS with the same product name; hypothetical protein complement(1490909..1492114) Prevotella ruminicola 23 9002159 YP_003574571.1 CDS PRU_1256 NC_014033.1 1492098 1493252 R identified by similarity to GB:CAG22388.1; match to protein family HMM PF01061; overlaps another CDS with the same product name; hypothetical protein complement(1492098..1493252) Prevotella ruminicola 23 9001111 YP_003574572.1 CDS PRU_1257 NC_014033.1 1493288 1494280 R identified by match to protein family HMM PF00529; hypothetical protein complement(1493288..1494280) Prevotella ruminicola 23 9001106 YP_003574573.1 CDS PRU_1258 NC_014033.1 1494289 1495746 R identified by match to protein family HMM PF02321; outer membrane efflux protein complement(1494289..1495746) Prevotella ruminicola 23 9000315 YP_003574574.1 CDS PRU_1259 NC_014033.1 1495755 1496627 R identified by similarity to GB:AAQ66448.1; hypothetical protein complement(1495755..1496627) Prevotella ruminicola 23 9002340 YP_003574575.1 CDS PRU_1260 NC_014033.1 1496799 1497044 D identified by similarity to GB:AAQ66043.1; hypothetical protein 1496799..1497044 Prevotella ruminicola 23 9001409 YP_003574576.1 CDS PRU_1261 NC_014033.1 1497091 1498623 D identified by similarity to SP:Q09049; match to protein family HMM PF01654; cytochrome d ubiquinol oxidase, subunit I 1497091..1498623 Prevotella ruminicola 23 9000779 YP_003574577.1 CDS cydB NC_014033.1 1498620 1499768 D identified by match to protein family HMM PF02322; cytochrome d ubiquinol oxidase, subunit II 1498620..1499768 Prevotella ruminicola 23 9002573 YP_003574578.1 CDS PRU_1263 NC_014033.1 1499878 1500363 R identified by similarity to SP:P35160; match to protein family HMM PF00085; match to protein family HMM PF00578; match to protein family HMM PF08534; thiol-disulfide oxidoreductase complement(1499878..1500363) Prevotella ruminicola 23 9002058 YP_003574579.1 CDS PRU_1264 NC_014033.1 1500462 1501991 R identified by similarity to SP:P16256; match to protein family HMM PF00474; SSS family transporter complement(1500462..1501991) Prevotella ruminicola 23 9002581 YP_003574580.1 CDS PRU_1265 NC_014033.1 1502073 1503161 R identified by similarity to GB:BAD50015.1; match to protein family HMM PF07396; hypothetical protein complement(1502073..1503161) Prevotella ruminicola 23 9000858 YP_003574581.1 CDS PRU_1266 NC_014033.1 1503538 1504758 R lipoprotein complement(1503538..1504758) Prevotella ruminicola 23 9000028 YP_003574582.1 CDS PRU_1267 NC_014033.1 1504772 1506934 R identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB dependent receptor complement(1504772..1506934) Prevotella ruminicola 23 9002408 YP_003574583.1 CDS PRU_1268 NC_014033.1 1507071 1508396 R identified by match to protein family HMM PF01270; family 8 glycosyl hydrolase complement(1507071..1508396) Prevotella ruminicola 23 9001255 YP_003574584.1 CDS topB NC_014033.1 1508531 1510639 D identified by match to protein family HMM PF01131; match to protein family HMM PF01751; match to protein family HMM TIGR01056; DNA topoisomerase III 1508531..1510639 Prevotella ruminicola 23 9000636 YP_003574585.1 CDS PRU_1270 NC_014033.1 1510844 1516321 D identified by similarity to GB:AAC82625.1; match to protein family HMM PF07581; GLUG domain-containing protein 1510844..1516321 Prevotella ruminicola 23 9000122 YP_003574586.1 CDS PRU_1271 NC_014033.1 1516352 1517704 D identified by glimmer; hypothetical protein 1516352..1517704 Prevotella ruminicola 23 9000648 YP_003574587.1 CDS PRU_1272 NC_014033.1 1517719 1517916 D lipoprotein 1517719..1517916 Prevotella ruminicola 23 9001383 YP_003574588.1 CDS PRU_1273 NC_014033.1 1517978 1520017 D identified by match to protein family HMM PF00691; match to protein family HMM PF07676; OmpA family protein 1517978..1520017 Prevotella ruminicola 23 9001864 YP_003574589.1 CDS PRU_1274 NC_014033.1 1520302 1520844 R identified by similarity to SP:Q45585; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; ECF family RNA polymerase sigma-70 factor complement(1520302..1520844) Prevotella ruminicola 23 9000905 YP_003574590.1 CDS PRU_1275 NC_014033.1 1520860 1521057 R identified by match to protein family HMM PF04024; PspC domain-containing protein complement(1520860..1521057) Prevotella ruminicola 23 9000851 YP_003574591.1 CDS PRU_1276 NC_014033.1 1521050 1521712 R identified by similarity to GB:AAO77150.1; hypothetical protein complement(1521050..1521712) Prevotella ruminicola 23 9000059 YP_003574592.1 CDS PRU_1277 NC_014033.1 1521856 1523079 D identified by match to protein family HMM PF01189; NOL1/NOP2/sun family protein 1521856..1523079 Prevotella ruminicola 23 9002104 YP_003574593.1 CDS thyA NC_014033.1 1523134 1523928 D identified by similarity to SP:P00470; match to protein family HMM PF00303; match to protein family HMM TIGR03284; thymidylate synthase 1523134..1523928 Prevotella ruminicola 23 9001482 YP_003574594.1 CDS folA NC_014033.1 1523956 1524471 D identified by similarity to SP:P00379; match to protein family HMM PF00186; dihydrofolate reductase 1523956..1524471 Prevotella ruminicola 23 9000493 YP_003574595.1 CDS PRU_1280 NC_014033.1 1524475 1524864 R lipoprotein complement(1524475..1524864) Prevotella ruminicola 23 9002705 YP_003574596.1 CDS PRU_1281 NC_014033.1 1525447 1526829 R identified by match to protein family HMM PF01658; match to protein family HMM PF07994; inositol-3-phosphate synthase complement(1525447..1526829) Prevotella ruminicola 23 9001846 YP_003574597.1 CDS PRU_1282 NC_014033.1 1527011 1529056 D identified by similarity to SP:P06129; match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane receptor (OMR) family transporter 1527011..1529056 Prevotella ruminicola 23 9001936 YP_003574598.1 CDS dnaA NC_014033.1 1529107 1530528 R identified by match to protein family HMM PF00308; match to protein family HMM PF08299; match to protein family HMM TIGR00362; chromosomal replication initiator protein DnaA complement(1529107..1530528) Prevotella ruminicola 23 9000674 YP_003574599.1 CDS PRU_1284 NC_014033.1 1530859 1531761 R identified by match to protein family HMM PF02470; Mce-like protein complement(1530859..1531761) Prevotella ruminicola 23 9000103 YP_003574600.1 CDS PRU_1285 NC_014033.1 1531779 1533005 R identified by similarity to SP:P37134; match to protein family HMM PF01520; N-acetylmuramoyl-L-alanine amidase complement(1531779..1533005) Prevotella ruminicola 23 9000671 YP_003574601.1 CDS folB NC_014033.1 1533105 1533470 R identified by similarity to SP:P56740; match to protein family HMM PF02152; match to protein family HMM TIGR00525; match to protein family HMM TIGR00526; dihydroneopterin aldolase complement(1533105..1533470) Prevotella ruminicola 23 9000081 YP_003574602.1 CDS PRU_1287 NC_014033.1 1533502 1534092 R identified by similarity to GB:AAO77252.1; hypothetical protein complement(1533502..1534092) Prevotella ruminicola 23 9002526 YP_003574603.1 CDS PRU_1288 NC_014033.1 1534295 1535059 D identified by match to protein family HMM PF00881; nitroreductase family protein 1534295..1535059 Prevotella ruminicola 23 9000966 YP_003574604.1 CDS PRU_1289 NC_014033.1 1535241 1536695 R identified by match to protein family HMM PF07690; anion:cation symporter (ACS) family transporter complement(1535241..1536695) Prevotella ruminicola 23 9002634 YP_003574605.1 CDS kduI NC_014033.1 1536697 1537617 R identified by similarity to SP:Q46938; match to protein family HMM PF04962; 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase complement(1536697..1537617) Prevotella ruminicola 23 9002037 YP_003574606.1 CDS PRU_1291 NC_014033.1 1537714 1539168 R identified by similarity to SP:P37189; similarity to GB:CAC20641.1; match to protein family HMM PF03611; PTS system galactitol family transporter subunit IIC complement(1537714..1539168) Prevotella ruminicola 23 9000270 YP_003574607.1 CDS PRU_1292 NC_014033.1 1539172 1541124 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF02743; overlaps another CDS with the same product name; sensor histidine kinase complement(1539172..1541124) Prevotella ruminicola 23 9000702 YP_003574608.1 CDS PRU_1293 NC_014033.1 1541121 1542584 R identified by match to protein family HMM PF00672; overlaps another CDS with the same product name; sensor histidine kinase complement(1541121..1542584) Prevotella ruminicola 23 9002243 YP_003574609.1 CDS PRU_1294 NC_014033.1 1542771 1543274 R identified by match to protein family HMM PF00293; mutator mutT protein complement(1542771..1543274) Prevotella ruminicola 23 9000463 YP_003574610.1 CDS PRU_1296 NC_014033.1 1544095 1544919 D identified by match to protein family HMM PF00037; iron-sulfur cluster-binding protein 1544095..1544919 Prevotella ruminicola 23 9001023 YP_003574611.1 CDS PRU_1297 NC_014033.1 1544891 1545565 R identified by similarity to GB:AAQ67081.1; match to protein family HMM PF01168; match to protein family HMM TIGR00044; hypothetical protein complement(1544891..1545565) Prevotella ruminicola 23 9002624 YP_003574612.1 CDS PRU_1298 NC_014033.1 1545586 1546062 R identified by similarity to GB:AAO76438.1; hypothetical protein complement(1545586..1546062) Prevotella ruminicola 23 9000814 YP_003574613.1 CDS PRU_1299 NC_014033.1 1546059 1547588 R identified by similarity to SP:Q8R9T6; hypothetical protein complement(1546059..1547588) Prevotella ruminicola 23 9002230 YP_003574614.1 CDS PRU_1300 NC_014033.1 1547476 1548681 D identified by similarity to PDB:1O4S_A; match to protein family HMM PF00155; aspartate aminotransferase 1547476..1548681 Prevotella ruminicola 23 9001173 YP_003574615.1 CDS PRU_1301 NC_014033.1 1548701 1549948 D identified by match to protein family HMM PF02687; ABC transporter permease 1548701..1549948 Prevotella ruminicola 23 9001724 YP_003574616.1 CDS PRU_1302 NC_014033.1 1550035 1551693 D identified by match to protein family HMM PF00501; AMP-binding enzyme 1550035..1551693 Prevotella ruminicola 23 9002169 YP_003574617.1 CDS PRU_1303 NC_014033.1 1551700 1553361 D identified by match to protein family HMM PF00501; AMP-binding enzyme 1551700..1553361 Prevotella ruminicola 23 9000488 YP_003574618.1 CDS PRU_1304 NC_014033.1 1553467 1554630 R hypothetical protein complement(1553467..1554630) Prevotella ruminicola 23 9000848 YP_003574619.1 CDS PRU_1305 NC_014033.1 1554634 1556718 R identified by similarity to SP:Q04446; match to protein family HMM PF00128; match to protein family HMM PF02806; match to protein family HMM PF02922; 1,4-alpha-glucan branching enzyme complement(1554634..1556718) Prevotella ruminicola 23 9001424 YP_003574620.1 CDS PRU_1306 NC_014033.1 1556752 1557198 R identified by similarity to GB:AAO75877.1; match to protein family HMM PF04074; match to protein family HMM TIGR00022; hypothetical protein complement(1556752..1557198) Prevotella ruminicola 23 9000314 YP_003574621.1 CDS PRU_1307 NC_014033.1 1557225 1558343 R identified by match to protein family HMM PF02493; MORN repeat protein complement(1557225..1558343) Prevotella ruminicola 23 9001907 YP_003574622.1 CDS kdsB NC_014033.1 1558483 1559229 D identified by similarity to SP:P42216; match to protein family HMM PF02348; match to protein family HMM TIGR00466; 3-deoxy-D-manno-octulosonate cytidylyltransferase 1558483..1559229 Prevotella ruminicola 23 9002483 YP_003574623.1 CDS PRU_1309 NC_014033.1 1559209 1559892 R identified by match to protein family HMM PF00226; match to protein family HMM PF01556; DnaJ family protein complement(1559209..1559892) Prevotella ruminicola 23 9002427 YP_003574624.1 CDS PRU_1310 NC_014033.1 1560021 1561787 D identified by similarity to SP:P08331; match to protein family HMM PF00149; match to protein family HMM PF02872; 2',3'-cyclic-nucleotide 2'-phosphodiesterase 1560021..1561787 Prevotella ruminicola 23 9001818 YP_003574625.1 CDS PRU_1311 NC_014033.1 1561784 1562557 D identified by match to protein family HMM PF00293; match to protein family HMM PF09297; NUDIX family hydrolase 1561784..1562557 Prevotella ruminicola 23 9001258 YP_003574626.1 CDS PRU_1312 NC_014033.1 1562554 1563333 R identified by similarity to GB:AAO75937.1; lipoprotein complement(1562554..1563333) Prevotella ruminicola 23 9000632 YP_003574627.1 CDS PRU_1313 NC_014033.1 1563334 1564653 R identified by similarity to SP:O32271; match to protein family HMM PF00984; match to protein family HMM PF01210; match to protein family HMM PF02737; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026; UDP-glucose 6-dehydrogenase complement(1563334..1564653) Prevotella ruminicola 23 9002642 YP_003574628.1 CDS PRU_1314 NC_014033.1 1564733 1565866 D identified by similarity to GB:AAO75934.1; match to protein family HMM PF05036; hypothetical protein 1564733..1565866 Prevotella ruminicola 23 9000729 YP_003574629.1 CDS PRU_1315 NC_014033.1 1565870 1566400 D identified by match to protein family HMM PF00498; FHA domain-containing protein 1565870..1566400 Prevotella ruminicola 23 9000579 YP_003574630.1 CDS pip NC_014033.1 1566406 1567278 D identified by similarity to SP:P52278; match to protein family HMM PF00561; match to protein family HMM TIGR01250; prolyl aminopeptidase 1566406..1567278 Prevotella ruminicola 23 9002600 YP_003574631.1 CDS PRU_1317 NC_014033.1 1567280 1568071 D identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 1567280..1568071 Prevotella ruminicola 23 9001578 YP_003574632.1 CDS PRU_1318 NC_014033.1 1568146 1568469 D identified by match to protein family HMM PF01909; nucleotidyltransferase domain-containing protein 1568146..1568469 Prevotella ruminicola 23 9001186 YP_003574633.1 CDS PRU_1319 NC_014033.1 1568473 1568850 D identified by similarity to PIR:B72307; match to protein family HMM PF05168; hypothetical protein 1568473..1568850 Prevotella ruminicola 23 9002373 YP_003574634.1 CDS cas2 NC_014033.1 1570049 1570357 R identified by match to protein family HMM TIGR01573; CRISPR-associated protein Cas2 complement(1570049..1570357) Prevotella ruminicola 23 9001146 YP_003574635.1 CDS csn1 NC_014033.1 1570398 1574012 R identified by similarity to PIR:F81299; match to protein family HMM TIGR01865; Csn1 family CRISPR-associated protein complement(1570398..1574012) Prevotella ruminicola 23 9002596 YP_003574636.1 CDS PRU_1322 NC_014033.1 1574280 1574597 D identified by match to protein family HMM PF05015; addiction module killer protein 1574280..1574597 Prevotella ruminicola 23 9000812 YP_003574637.1 CDS PRU_1323 NC_014033.1 1574647 1574946 D identified by similarity to SP:Q46560; similarity to PRF:2210234B; match to protein family HMM PF01381; match to protein family HMM TIGR02607; addiction module antidote protein, HigA family 1574647..1574946 Prevotella ruminicola 23 9001824 YP_003574638.1 CDS PRU_1324 NC_014033.1 1574943 1575341 R identified by similarity to GB:AAO79137.1; hypothetical protein complement(1574943..1575341) Prevotella ruminicola 23 9000057 YP_003574639.1 CDS PRU_1325 NC_014033.1 1576067 1578181 D identified by similarity to GB:AAO78491.1; match to protein family HMM PF05272; hypothetical protein 1576067..1578181 Prevotella ruminicola 23 9001400 YP_003574640.1 CDS PRU_1326 NC_014033.1 1578215 1579576 R identified by match to protein family HMM PF01554; MATE efflux protein complement(1578215..1579576) Prevotella ruminicola 23 9000757 YP_003574641.1 CDS PRU_1327 NC_014033.1 1579585 1580859 R identified by match to protein family HMM PF01134; match to protein family HMM PF01266; match to protein family HMM PF03486; glucose inhibited division protein A complement(1579585..1580859) Prevotella ruminicola 23 9000492 YP_003574642.1 CDS PRU_1328 NC_014033.1 1580867 1581829 R iron-sulfur cluster-binding protein complement(1580867..1581829) Prevotella ruminicola 23 9002452 YP_003574643.1 CDS PRU_1330 NC_014033.1 1582718 1583500 D identified by match to protein family HMM PF02563; polysaccharide export protein, outer membrane auxiliary (OMA) family 1582718..1583500 Prevotella ruminicola 23 9000412 YP_003574644.1 CDS PRU_1331 NC_014033.1 1583511 1585064 D identified by match to protein family HMM PF02706; chain length determinant family protein 1583511..1585064 Prevotella ruminicola 23 9000562 YP_003574645.1 CDS PRU_1332 NC_014033.1 1585064 1586365 D identified by match to protein family HMM PF01943; PTS system polysaccharide transporter 1585064..1586365 Prevotella ruminicola 23 9001200 YP_003574646.1 CDS PRU_1333 NC_014033.1 1586352 1587482 D identified by glimmer; hypothetical protein 1586352..1587482 Prevotella ruminicola 23 9001213 YP_003574647.1 CDS PRU_1334 NC_014033.1 1587448 1588206 D identified by match to protein family HMM PF00535; group 2 family glycosyltransferase 1587448..1588206 Prevotella ruminicola 23 9001471 YP_003574648.1 CDS PRU_1335 NC_014033.1 1588203 1589072 D identified by match to protein family HMM PF01531; family 11 glycosyl transferase 1588203..1589072 Prevotella ruminicola 23 9002077 YP_003574649.1 CDS PRU_1336 NC_014033.1 1589069 1589884 D identified by similarity to SP:Q46635; match to protein family HMM PF00535; group 2 family glycosyltransferase 1589069..1589884 Prevotella ruminicola 23 9000222 YP_003574650.1 CDS PRU_1337 NC_014033.1 1589939 1590565 D identified by match to protein family HMM PF02397; bacterial sugar transferase 1589939..1590565 Prevotella ruminicola 23 9000000 YP_003574651.1 CDS PRU_1338 NC_014033.1 1590562 1590957 R lipoprotein complement(1590562..1590957) Prevotella ruminicola 23 9000760 YP_003574652.1 CDS PRU_1339 NC_014033.1 1590970 1592454 R identified by similarity to GB:BAD48329.1; hypothetical protein complement(1590970..1592454) Prevotella ruminicola 23 9001891 YP_003574653.1 CDS PRU_1340 NC_014033.1 1592613 1593452 D identified by similarity to GB:BAD47294.1; hypothetical protein 1592613..1593452 Prevotella ruminicola 23 9002664 YP_003574654.1 CDS PRU_1341 NC_014033.1 1593456 1593965 R identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein complement(1593456..1593965) Prevotella ruminicola 23 8999978 YP_003574655.1 CDS PRU_1342 NC_014033.1 1594056 1594703 D identified by similarity to GB:AAO75649.1; hypothetical protein 1594056..1594703 Prevotella ruminicola 23 9000787 YP_003574656.1 CDS udk NC_014033.1 1594690 1595304 R identified by match to protein family HMM PF00485; match to protein family HMM TIGR00235; uridine kinase complement(1594690..1595304) Prevotella ruminicola 23 9001257 YP_003574657.1 CDS PRU_1344 NC_014033.1 1595301 1595879 R identified by similarity to GB:AAK02835.1; hypothetical protein complement(1595301..1595879) Prevotella ruminicola 23 9002044 YP_003574658.1 CDS PRU_1345 NC_014033.1 1595879 1596841 R identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein complement(1595879..1596841) Prevotella ruminicola 23 9001852 YP_003574659.1 CDS rpmE NC_014033.1 1597074 1597328 D identified by match to protein family HMM PF01197; match to protein family HMM TIGR00105; 50S ribosomal protein L31 1597074..1597328 Prevotella ruminicola 23 9002258 YP_003574660.1 CDS PRU_1347 NC_014033.1 1597363 1597983 D identified by similarity to PIR:S33618; match to protein family HMM PF00255; glutathione peroxidase 1597363..1597983 Prevotella ruminicola 23 9001045 YP_003574661.1 CDS trxB NC_014033.1 1598013 1598945 D identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR01292; thioredoxin-disulfide reductase 1598013..1598945 Prevotella ruminicola 23 9000144 YP_003574662.1 CDS PRU_1349 NC_014033.1 1599282 1600946 D identified by match to protein family HMM PF00072; match to protein family HMM PF00165; match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histindine kinase/DNA-binding response regulator 1599282..1600946 Prevotella ruminicola 23 9000654 YP_003574663.1 CDS PRU_1350 NC_014033.1 1600867 1602300 R identified by match to protein family HMM PF00474; SSS family transporter complement(1600867..1602300) Prevotella ruminicola 23 9001939 YP_003574664.1 CDS PRU_1351 NC_014033.1 1602444 1603805 D identified by match to protein family HMM PF00291; match to protein family HMM TIGR01415; pyridoxal-phosphate dependent TrpB-like protein 1602444..1603805 Prevotella ruminicola 23 9000113 YP_003574665.1 CDS PRU_1352 NC_014033.1 1603864 1604649 R identified by similarity to GB:AAQ65610.1; hypothetical protein complement(1603864..1604649) Prevotella ruminicola 23 9001179 YP_003574666.1 CDS PRU_1353 NC_014033.1 1604828 1605289 R identified by similarity to GB:AAQ66308.1; hypothetical protein complement(1604828..1605289) Prevotella ruminicola 23 9002344 YP_003574667.1 CDS PRU_1354 NC_014033.1 1605291 1605629 R identified by similarity to GB:AAQ66307.1; hypothetical protein complement(1605291..1605629) Prevotella ruminicola 23 9001547 YP_003574668.1 CDS PRU_1355 NC_014033.1 1605633 1606460 R identified by similarity to GB:AAQ66305.1; match to protein family HMM TIGR03302; lipoprotein complement(1605633..1606460) Prevotella ruminicola 23 9000801 YP_003574669.1 CDS uvrB NC_014033.1 1606570 1608609 D identified by match to protein family HMM PF00271; match to protein family HMM PF02151; match to protein family HMM PF04851; match to protein family HMM TIGR00631; excinuclease ABC subunit B 1606570..1608609 Prevotella ruminicola 23 9000024 YP_003574670.1 CDS PRU_1357 NC_014033.1 1608706 1609323 D identified by similarity to GB:AAO76686.1; hypothetical protein 1608706..1609323 Prevotella ruminicola 23 9000416 YP_003574671.1 CDS PRU_1358 NC_014033.1 1609329 1609502 D identified by glimmer; hypothetical protein 1609329..1609502 Prevotella ruminicola 23 9002706 YP_003574672.1 CDS PRU_1359 NC_014033.1 1609506 1611836 D identified by similarity to GB:BAD48392.1; hypothetical protein 1609506..1611836 Prevotella ruminicola 23 9001769 YP_003574673.1 CDS menA NC_014033.1 1611833 1612726 R identified by similarity to SP:P32166; match to protein family HMM PF01040; match to protein family HMM TIGR00751; 1,4-dihydroxy-2-naphthoate octaprenyltransferase complement(1611833..1612726) Prevotella ruminicola 23 9001128 YP_003574674.1 CDS PRU_1361 NC_014033.1 1612817 1613473 D identified by match to protein family HMM PF01966; HD domain-containing protein 1612817..1613473 Prevotella ruminicola 23 9000977 YP_003574675.1 CDS PRU_1362 NC_014033.1 1613602 1614435 R identified by match to protein family HMM PF00849; match to protein family HMM PF01479; RNA pseudouridine synthase family protein complement(1613602..1614435) Prevotella ruminicola 23 9001392 YP_003574676.1 CDS uxaC NC_014033.1 1614652 1616058 R identified by match to protein family HMM PF02614; glucuronate isomerase complement(1614652..1616058) Prevotella ruminicola 23 9000154 YP_003574677.1 CDS nrdG_1 NC_014033.1 1617210 1617677 R identified by similarity to GB:AAP95362.1; match to protein family HMM TIGR02826; anaerobic ribonucleoside-triphosphate reductase activating protein complement(1617210..1617677) Prevotella ruminicola 23 9000893 YP_003574678.1 CDS nrdD_1 NC_014033.1 1617671 1619776 R identified by similarity to SP:P28903; match to protein family HMM PF03477; match to protein family HMM TIGR02827; anaerobic ribonucleoside-triphosphate reductase complement(1617671..1619776) Prevotella ruminicola 23 9001503 YP_003574679.1 CDS rbr NC_014033.1 1620344 1620886 D identified by match to protein family HMM PF00301; match to protein family HMM PF02915; rubrerythrin 1620344..1620886 Prevotella ruminicola 23 9000257 YP_003574680.1 CDS PRU_1368 NC_014033.1 1620970 1622031 R identified by match to protein family HMM PF02350; UDP-N-acetylglucosamine 2-epimerase complement(1620970..1622031) Prevotella ruminicola 23 9000870 YP_003574681.1 CDS ribE NC_014033.1 1622380 1622979 D identified by similarity to SP:P50854; match to protein family HMM PF00677; match to protein family HMM TIGR00187; riboflavin synthase subunit alpha 1622380..1622979 Prevotella ruminicola 23 9000229 YP_003574682.1 CDS PRU_1370 NC_014033.1 1622987 1623628 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; HAD-superfamily hydrolase complement(1622987..1623628) Prevotella ruminicola 23 9000865 YP_003574683.1 CDS PRU_1371 NC_014033.1 1623656 1626265 R identified by similarity to GB:AAR99599.1; match to protein family HMM PF00686; match to protein family HMM PF02446; 4-alpha-glucanotransferase complement(1623656..1626265) Prevotella ruminicola 23 9002513 YP_003574684.1 CDS PRU_1372 NC_014033.1 1626364 1627389 D identified by similarity to GB:AAQ66708.1; match to protein family HMM PF02618; match to protein family HMM TIGR00247; hypothetical protein 1626364..1627389 Prevotella ruminicola 23 9000363 YP_003574685.1 CDS glnS NC_014033.1 1627428 1629182 D identified by similarity to SP:P00962; match to protein family HMM PF00749; match to protein family HMM PF03950; match to protein family HMM TIGR00440; glutamine--tRNA ligase 1627428..1629182 Prevotella ruminicola 23 9001357 YP_003574686.1 CDS PRU_1374 NC_014033.1 1629194 1630612 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; match to protein family HMM PF07720; hypothetical protein 1629194..1630612 Prevotella ruminicola 23 9002221 YP_003574687.1 CDS PRU_1375 NC_014033.1 1630614 1631252 D identified by match to protein family HMM PF09335; DedA family protein 1630614..1631252 Prevotella ruminicola 23 9000244 YP_003574688.1 CDS PRU_1376 NC_014033.1 1631333 1632400 D identified by match to protein family HMM PF00483; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 1631333..1632400 Prevotella ruminicola 23 9002075 YP_003574689.1 CDS gmd NC_014033.1 1632412 1633503 D identified by similarity to SP:P32054; match to protein family HMM PF01370; match to protein family HMM TIGR01472; GDP-mannose 4,6-dehydratase 1632412..1633503 Prevotella ruminicola 23 9000234 YP_003574690.1 CDS fcl NC_014033.1 1633493 1634662 D identified by similarity to SP:P32055; match to protein family HMM PF01370; GDP-L-fucose synthase 1633493..1634662 Prevotella ruminicola 23 9002504 YP_003574691.1 CDS PRU_1379 NC_014033.1 1634702 1636192 R identified by similarity to SP:P39211; match to protein family HMM PF00370; match to protein family HMM PF02782; xylulokinase complement(1634702..1636192) Prevotella ruminicola 23 9002272 YP_003574692.1 CDS phoB NC_014033.1 1636378 1636743 D identified by similarity to PDB:1MVO_A; match to protein family HMM PF00072; response regulator PhoB 1636378..1636743 Prevotella ruminicola 23 9001631 YP_003574693.1 CDS PRU_1381 NC_014033.1 1636753 1637952 D identified by similarity to SP:Q04664; match to protein family HMM PF02397; bacterial sugar transferase family protein 1636753..1637952 Prevotella ruminicola 23 9000686 YP_003574694.1 CDS PRU_1382 NC_014033.1 1637969 1638976 D identified by similarity to GB:AAD51072.1; hypothetical protein 1637969..1638976 Prevotella ruminicola 23 9000072 YP_003574695.1 CDS PRU_1383 NC_014033.1 1638994 1641171 D identified by similarity to GB:AAO76271.1; hypothetical protein 1638994..1641171 Prevotella ruminicola 23 9002639 YP_003574696.1 CDS PRU_1384 NC_014033.1 1641171 1642709 D identified by similarity to GB:AAO76272.1; hypothetical protein 1641171..1642709 Prevotella ruminicola 23 9002055 YP_003574697.1 CDS PRU_1385 NC_014033.1 1642693 1643589 D identified by match to protein family HMM PF00535; group 2 family glycosyltransferase 1642693..1643589 Prevotella ruminicola 23 9001008 YP_003574698.1 CDS PRU_1386 NC_014033.1 1643600 1644751 D identified by match to protein family HMM PF00535; group 2 family glycosyltransferase 1643600..1644751 Prevotella ruminicola 23 9001940 YP_003574699.1 CDS PRU_1387 NC_014033.1 1644766 1645938 D identified by match to protein family HMM PF00535; group 2 family glycosyltransferase 1644766..1645938 Prevotella ruminicola 23 9001165 YP_003574700.1 CDS PRU_1388 NC_014033.1 1645935 1647485 D multidrug/oligosaccharidyl-lipid/polysaccharide (MOP) flippase superfamily transporter 1645935..1647485 Prevotella ruminicola 23 9002394 YP_003574701.1 CDS PRU_1389 NC_014033.1 1647495 1648412 D identified by similarity to GB:AAL23738.1; hypothetical protein 1647495..1648412 Prevotella ruminicola 23 9000305 YP_003574702.1 CDS PRU_1390 NC_014033.1 1648440 1649624 D identified by match to protein family HMM PF00534; hexosyltransferase YtcC 1648440..1649624 Prevotella ruminicola 23 9000975 YP_003574703.1 CDS PRU_1391 NC_014033.1 1649627 1650670 R identified by match to protein family HMM PF01757; acyltransferase family protein complement(1649627..1650670) Prevotella ruminicola 23 9001483 YP_003574704.1 CDS PRU_1393 NC_014033.1 1651769 1652767 R identified by match to protein family HMM PF01757; acyltransferase family protein complement(1651769..1652767) Prevotella ruminicola 23 9002733 YP_003574705.1 CDS PRU_1394 NC_014033.1 1652784 1653758 R identified by similarity to GB:CAG37938.1; hypothetical protein complement(1652784..1653758) Prevotella ruminicola 23 9001896 YP_003574706.1 CDS PRU_1395 NC_014033.1 1653771 1654670 R identified by match to protein family HMM PF00535; group 2 family glycosyltransferase complement(1653771..1654670) Prevotella ruminicola 23 9000786 YP_003574707.1 CDS PRU_1396 NC_014033.1 1654752 1655579 R identified by similarity to GB:CAD45188.1; pectin acetylesterase complement(1654752..1655579) Prevotella ruminicola 23 9000037 YP_003574708.1 CDS PRU_1397 NC_014033.1 1655694 1657562 R lipoprotein complement(1655694..1657562) Prevotella ruminicola 23 9002264 YP_003574709.1 CDS PRU_1398 NC_014033.1 1657589 1659586 R identified by glimmer; hypothetical protein complement(1657589..1659586) Prevotella ruminicola 23 9002693 YP_003574710.1 CDS PRU_1399 NC_014033.1 1659701 1661779 R identified by similarity to GB:AAO75827.1; hypothetical protein complement(1659701..1661779) Prevotella ruminicola 23 8999996 YP_003574711.1 CDS PRU_1400 NC_014033.1 1661915 1664071 R identified by similarity to GB:AAO78491.1; hypothetical protein complement(1661915..1664071) Prevotella ruminicola 23 9001104 YP_003574712.1 CDS PRU_1401 NC_014033.1 1664521 1664955 D identified by similarity to GB:AAO79616.1; hypothetical protein 1664521..1664955 Prevotella ruminicola 23 9001928 YP_003574713.1 CDS PRU_1402 NC_014033.1 1665050 1667080 D identified by match to protein family HMM PF02368; surface protein 1665050..1667080 Prevotella ruminicola 23 9001689 YP_003574714.1 CDS PRU_1403 NC_014033.1 1667125 1678092 R identified by similarity to GB:AAC82625.1; cell surface protein complement(1667125..1678092) Prevotella ruminicola 23 9001793 YP_003574715.1 CDS PRU_1405 NC_014033.1 1679857 1680735 D identified by match to protein family HMM PF01040; prenyltransferase, UbiA family 1679857..1680735 Prevotella ruminicola 23 9000088 YP_003574716.1 CDS nth NC_014033.1 1680737 1681372 D identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083; endonuclease III 1680737..1681372 Prevotella ruminicola 23 9001942 YP_003574717.1 CDS PRU_1407 NC_014033.1 1681362 1681799 R identified by similarity to GB:AAO79454.1; hypothetical protein complement(1681362..1681799) Prevotella ruminicola 23 9002069 YP_003574718.1 CDS PRU_1408 NC_014033.1 1681813 1682175 R identified by similarity to GB:AAO79453.1; hypothetical protein complement(1681813..1682175) Prevotella ruminicola 23 9001393 YP_003574719.1 CDS PRU_1409 NC_014033.1 1682207 1682704 R identified by similarity to SP:Q06198; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; ECF family RNA polymerase sigma-70 factor complement(1682207..1682704) Prevotella ruminicola 23 9002311 YP_003574720.1 CDS PRU_1410 NC_014033.1 1682674 1684164 R lipoprotein complement(1682674..1684164) Prevotella ruminicola 23 9000162 YP_003574721.1 CDS rnz NC_014033.1 1684503 1685417 R identified by similarity to SP:P54548; match to protein family HMM PF00753; match to protein family HMM TIGR02651; ribonuclease Z complement(1684503..1685417) Prevotella ruminicola 23 9001084 YP_003574722.1 CDS PRU_1412 NC_014033.1 1685434 1686117 R lipoprotein complement(1685434..1686117) Prevotella ruminicola 23 9002643 YP_003574723.1 CDS PRU_1413 NC_014033.1 1686134 1686994 R identified by match to protein family HMM PF03819; match to protein family HMM TIGR00444; MazG family protein complement(1686134..1686994) Prevotella ruminicola 23 9000310 YP_003574724.1 CDS valS NC_014033.1 1687106 1689814 D identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00422; valine--tRNA ligase 1687106..1689814 Prevotella ruminicola 23 9000018 YP_003574725.1 CDS PRU_1415 NC_014033.1 1689845 1691806 R identified by match to protein family HMM PF02683; thiol:disulfide interchange protein complement(1689845..1691806) Prevotella ruminicola 23 9000820 YP_003574726.1 CDS glnA_1 NC_014033.1 1691822 1694014 R identified by similarity to GB:AAF91344.1; match to protein family HMM PF00120; type III glutamine synthetase complement(1691822..1694014) Prevotella ruminicola 23 9000753 YP_003574727.1 CDS PRU_1417 NC_014033.1 1694057 1694941 R identified by match to protein family HMM PF00795; carbon-nitrogen family hydrolase complement(1694057..1694941) Prevotella ruminicola 23 9002592 YP_003574728.1 CDS PRU_1418 NC_014033.1 1694938 1695954 R identified by match to protein family HMM PF04371; peptidyl-arginine deiminase family protein complement(1694938..1695954) Prevotella ruminicola 23 9000795 YP_003574729.1 CDS PRU_1419 NC_014033.1 1696039 1696641 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1696039..1696641 Prevotella ruminicola 23 9000147 YP_003574730.1 CDS PRU_1420 NC_014033.1 1696638 1697384 D identified by similarity to GB:AAM31776.1; hypothetical protein 1696638..1697384 Prevotella ruminicola 23 9002339 YP_003574731.1 CDS PRU_1421 NC_014033.1 1697582 1698298 D identified by glimmer; hypothetical protein 1697582..1698298 Prevotella ruminicola 23 9001056 YP_003574732.1 CDS PRU_1422 NC_014033.1 1698295 1699308 R acyltransferase family protein complement(1698295..1699308) Prevotella ruminicola 23 9001041 YP_003574733.1 CDS PRU_1423 NC_014033.1 1699370 1700338 D identified by match to protein family HMM PF01757; acyltransferase family protein 1699370..1700338 Prevotella ruminicola 23 9000179 YP_003574734.1 CDS PRU_1424 NC_014033.1 1700340 1701434 R identified by match to protein family HMM PF00534; group 1 family glycosyltransferase complement(1700340..1701434) Prevotella ruminicola 23 9001375 YP_003574735.1 CDS PRU_1425 NC_014033.1 1701431 1702261 R identified by match to protein family HMM PF00535; group 2 family glycosyltransferase complement(1701431..1702261) Prevotella ruminicola 23 9001837 YP_003574736.1 CDS PRU_1427 NC_014033.1 1703233 1704414 D identified by match to protein family HMM PF04488; glycosyl transferase family protein 1703233..1704414 Prevotella ruminicola 23 9001980 YP_003574737.1 CDS PRU_1430 NC_014033.1 1706087 1706884 R identified by match to protein family HMM PF04991; LicD family protein complement(1706087..1706884) Prevotella ruminicola 23 9000123 YP_003574738.1 CDS PRU_1431 NC_014033.1 1706938 1708080 R identified by similarity to GB:AAO76285.1; hypothetical protein complement(1706938..1708080) Prevotella ruminicola 23 9000392 YP_003574739.1 CDS PRU_1432 NC_014033.1 1708083 1709114 R identified by match to protein family HMM PF00535; group 2 family glycosyltransferase complement(1708083..1709114) Prevotella ruminicola 23 9002570 YP_003574740.1 CDS PRU_1433 NC_014033.1 1709116 1710264 R identified by match to protein family HMM PF00534; group 1 family glycosyltransferase complement(1709116..1710264) Prevotella ruminicola 23 9001850 YP_003574741.1 CDS PRU_1434 NC_014033.1 1710743 1711936 D identified by match to protein family HMM PF00534; group 1 family glycosyltransferase 1710743..1711936 Prevotella ruminicola 23 9001030 YP_003574742.1 CDS PRU_1435 NC_014033.1 1711911 1712501 D identified by similarity to GB:CAA11147.1; match to protein family HMM PF00132; O-acetyltransferase 1711911..1712501 Prevotella ruminicola 23 9002226 YP_003574743.1 CDS PRU_1436 NC_014033.1 1712498 1713640 D identified by similarity to GB:BAA07751.1; match to protein family HMM PF00534; group 1 family glycosyltransferase 1712498..1713640 Prevotella ruminicola 23 9001637 YP_003574744.1 CDS PRU_1437 NC_014033.1 1713607 1713888 R identified by similarity to GB:AAQ65299.1; hypothetical protein complement(1713607..1713888) Prevotella ruminicola 23 9000987 YP_003574745.1 CDS PRU_1438 NC_014033.1 1713954 1714262 R identified by similarity to GB:AAO45322.1; hypothetical protein complement(1713954..1714262) Prevotella ruminicola 23 9000965 YP_003574746.1 CDS aspS NC_014033.1 1714431 1716212 R identified by similarity to SP:P36419; match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM PF02938; match to protein family HMM TIGR00459; aspartate--tRNA ligase complement(1714431..1716212) Prevotella ruminicola 23 9001073 YP_003574747.1 CDS PRU_1440 NC_014033.1 1716353 1716739 D identified by similarity to GB:AAO76192.1; match to protein family HMM PF07610; hypothetical protein 1716353..1716739 Prevotella ruminicola 23 9002073 YP_003574748.1 CDS PRU_1441 NC_014033.1 1716736 1717914 R identified by similarity to GB:AAO75698.1; hypothetical protein complement(1716736..1717914) Prevotella ruminicola 23 9001557 YP_003574749.1 CDS PRU_1442 NC_014033.1 1718150 1719913 D identified by match to protein family HMM PF02096; match to protein family HMM TIGR03592; match to protein family HMM TIGR03593; inner-membrane protein, 60 kDa 1718150..1719913 Prevotella ruminicola 23 9001115 YP_003574750.1 CDS PRU_1443 NC_014033.1 1719919 1722087 D identified by match to protein family HMM PF00326; match to protein family HMM PF07676; S9 family peptidase 1719919..1722087 Prevotella ruminicola 23 9000306 YP_003574751.1 CDS PRU_1444 NC_014033.1 1722193 1723815 D identified by similarity to GB:AAQ65659.1; match to protein family HMM PF07690; transporter 1722193..1723815 Prevotella ruminicola 23 9002725 YP_003574752.1 CDS PRU_1445 NC_014033.1 1723818 1725281 D identified by match to protein family HMM PF08903; hypothetical protein 1723818..1725281 Prevotella ruminicola 23 9000968 YP_003574753.1 CDS PRU_1446 NC_014033.1 1725257 1726612 D identified by match to protein family HMM PF07690; MFS transporter 1725257..1726612 Prevotella ruminicola 23 9002455 YP_003574754.1 CDS PRU_1447 NC_014033.1 1726602 1727537 R identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein complement(1726602..1727537) Prevotella ruminicola 23 9001670 YP_003574755.1 CDS nhaC NC_014033.1 1727534 1728931 R identified by match to protein family HMM PF03553; match to protein family HMM TIGR00931; Na+/H+ antiporter NhaC complement(1727534..1728931) Prevotella ruminicola 23 9000679 YP_003574756.1 CDS PRU_1449 NC_014033.1 1728932 1730464 R identified by match to protein family HMM PF00854; match to protein family HMM PF07690; match to protein family HMM TIGR00924; peptide transporter, proton-dependent oligopeptide transporter (POT) family complement(1728932..1730464) Prevotella ruminicola 23 9000110 YP_003574757.1 CDS PRU_1450 NC_014033.1 1730475 1731284 R identified by similarity to GB:AAQ67102.1; hypothetical protein complement(1730475..1731284) Prevotella ruminicola 23 9001949 YP_003574758.1 CDS PRU_1451 NC_014033.1 1731303 1732655 R identified by match to protein family HMM PF01476; LysM domain-containing protein complement(1731303..1732655) Prevotella ruminicola 23 9001348 YP_003574759.1 CDS PRU_1452 NC_014033.1 1732792 1733196 D identified by similarity to GB:AAQ66154.1; hypothetical protein 1732792..1733196 Prevotella ruminicola 23 9000371 YP_003574760.1 CDS uvrA_1 NC_014033.1 1733180 1736020 D identified by match to protein family HMM PF00005; match to protein family HMM TIGR00630; excinuclease ABC subunit A 1733180..1736020 Prevotella ruminicola 23 9002537 YP_003574761.1 CDS trpB NC_014033.1 1736388 1737593 D identified by match to protein family HMM PF00291; match to protein family HMM TIGR00263; tryptophan synthase subunit beta 1736388..1737593 Prevotella ruminicola 23 9001675 YP_003574762.1 CDS trpE NC_014033.1 1737610 1739001 D identified by similarity to SP:P05378; match to protein family HMM PF00425; match to protein family HMM PF04715; anthranilate synthase subunit I 1737610..1739001 Prevotella ruminicola 23 9000564 YP_003574763.1 CDS trpG NC_014033.1 1739038 1739601 D identified by similarity to PIR:A01122; match to protein family HMM PF00117; match to protein family HMM TIGR00566; anthranilate synthase subunit II 1739038..1739601 Prevotella ruminicola 23 9000274 YP_003574764.1 CDS trpD NC_014033.1 1739648 1740646 D identified by match to protein family HMM PF00591; match to protein family HMM PF02885; match to protein family HMM TIGR01245; anthranilate phosphoribosyltransferase 1739648..1740646 Prevotella ruminicola 23 9000693 YP_003574765.1 CDS trpC NC_014033.1 1740709 1741494 D identified by similarity to SP:P20577; match to protein family HMM PF00218; indole-3-glycerol phosphate synthase 1740709..1741494 Prevotella ruminicola 23 9001505 YP_003574766.1 CDS trpA NC_014033.1 1742158 1742934 D identified by match to protein family HMM PF00290; match to protein family HMM TIGR00262; tryptophan synthase subunit alpha 1742158..1742934 Prevotella ruminicola 23 9000606 YP_003574767.1 CDS PRU_1461 NC_014033.1 1743042 1747832 D identified by match to protein family HMM PF00295; match to protein family HMM PF07470; pectinase family protein/glycosyl hydrolase family 88 1743042..1747832 Prevotella ruminicola 23 9001074 YP_003574768.1 CDS PRU_1462 NC_014033.1 1748038 1751058 D identified by similarity to GB:AAA95938.1; match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane protein SusC 1748038..1751058 Prevotella ruminicola 23 9001875 YP_003574769.1 CDS PRU_1463 NC_014033.1 1751098 1753194 D identified by similarity to GB:AAC97593.1; match to protein family HMM PF07980; hypothetical protein 1751098..1753194 Prevotella ruminicola 23 9000170 YP_003574770.1 CDS PRU_1464 NC_014033.1 1753295 1756108 R identified by glimmer; hypothetical protein complement(1753295..1756108) Prevotella ruminicola 23 9000935 YP_003574771.1 CDS rhaD NC_014033.1 1756108 1756899 R identified by similarity to SP:P32169; match to protein family HMM PF00596; rhamnulose-1-phosphate aldolase complement(1756108..1756899) Prevotella ruminicola 23 9001061 YP_003574772.1 CDS PRU_1466 NC_014033.1 1756925 1758256 R identified by similarity to SP:P42417; match to protein family HMM PF00083; match to protein family HMM PF07690; sugar transporter complement(1756925..1758256) Prevotella ruminicola 23 9002040 YP_003574773.1 CDS rhaA NC_014033.1 1758261 1759511 R identified by similarity to SP:P32170; L-rhamnose isomerase complement(1758261..1759511) Prevotella ruminicola 23 9001076 YP_003574774.1 CDS rhaB NC_014033.1 1759518 1761002 R identified by similarity to SP:P32171; similarity to GB:AAF01486.1; match to protein family HMM PF00370; match to protein family HMM PF02782; rhamnulokinase complement(1759518..1761002) Prevotella ruminicola 23 9000447 YP_003574775.1 CDS PRU_1469 NC_014033.1 1760995 1762209 R identified by match to protein family HMM PF00295; polygalacturonase family protein complement(1760995..1762209) Prevotella ruminicola 23 9002640 YP_003574776.1 CDS PRU_1470 NC_014033.1 1762437 1765142 R identified by match to protein family HMM PF02837; glycosyl hydrolase complement(1762437..1765142) Prevotella ruminicola 23 9000673 YP_003574777.1 CDS PRU_1471 NC_014033.1 1765144 1765461 R identified by similarity to GB:AAO79282.1; match to protein family HMM PF05336; match to protein family HMM TIGR02625; hypothetical protein complement(1765144..1765461) Prevotella ruminicola 23 9001570 YP_003574778.1 CDS PRU_1472 NC_014033.1 1765476 1767065 R identified by match to protein family HMM PF00657; lipase/acylhydrolase complement(1765476..1767065) Prevotella ruminicola 23 9001145 YP_003574779.1 CDS PRU_1473 NC_014033.1 1767094 1768065 R identified by match to protein family HMM PF00248; aldo/keto reductase family oxidoreductase complement(1767094..1768065) Prevotella ruminicola 23 9000415 YP_003574780.1 CDS PRU_1474 NC_014033.1 1768252 1768767 R identified by similarity to GB:AAO75753.1; hypothetical protein complement(1768252..1768767) Prevotella ruminicola 23 9002574 YP_003574781.1 CDS PRU_1476 NC_014033.1 1770063 1772429 D identified by match to protein family HMM PF01650; C13 family peptidase 1770063..1772429 Prevotella ruminicola 23 9001261 YP_003574782.1 CDS PRU_1477 NC_014033.1 1772439 1773068 D identified by similarity to PIR:AI1280; lipoprotein 1772439..1773068 Prevotella ruminicola 23 9002190 YP_003574783.1 CDS PRU_1478 NC_014033.1 1773124 1773639 D identified by similarity to GB:BAC81190.1; match to protein family HMM PF00578; thioredoxin family protein 1773124..1773639 Prevotella ruminicola 23 9001415 YP_003574784.1 CDS PRU_1479 NC_014033.1 1773644 1774345 D lipoprotein 1773644..1774345 Prevotella ruminicola 23 9001037 YP_003574785.1 CDS PRU_1480 NC_014033.1 1774442 1775998 D identified by glimmer; hypothetical protein 1774442..1775998 Prevotella ruminicola 23 9000417 YP_003574786.1 CDS PRU_1481 NC_014033.1 1776133 1776537 R identified by similarity to GB:CAD79095.1; match to protein family HMM TIGR00305; toxin-antitoxin system toxin component complement(1776133..1776537) Prevotella ruminicola 23 9001504 YP_003574787.1 CDS PRU_1482 NC_014033.1 1777047 1777250 R identified by glimmer; hypothetical protein complement(1777047..1777250) Prevotella ruminicola 23 9000904 YP_003574788.1 CDS PRU_1483 NC_014033.1 1777377 1778411 R identified by match to protein family HMM PF02661; Fic family protein complement(1777377..1778411) Prevotella ruminicola 23 9001862 YP_003574789.1 CDS PRU_1484 NC_014033.1 1778578 1779045 R identified by similarity to GB:AAN67722.1; match to protein family HMM PF08291; hypothetical protein complement(1778578..1779045) Prevotella ruminicola 23 9001242 YP_003574790.1 CDS PRU_1485 NC_014033.1 1779072 1779410 R identified by glimmer; hypothetical protein complement(1779072..1779410) Prevotella ruminicola 23 9002292 YP_003574791.1 CDS PRU_1486 NC_014033.1 1779440 1781056 R identified by glimmer; hypothetical protein complement(1779440..1781056) Prevotella ruminicola 23 9001551 YP_003574792.1 CDS PRU_1487 NC_014033.1 1781092 1781586 R identified by glimmer; hypothetical protein complement(1781092..1781586) Prevotella ruminicola 23 9000125 YP_003574793.1 CDS PRU_1488 NC_014033.1 1781837 1782508 R identified by match to protein family HMM PF09669; antirepressor complement(1781837..1782508) Prevotella ruminicola 23 9000534 YP_003574794.1 CDS PRU_1489 NC_014033.1 1782601 1782885 R identified by glimmer; hypothetical protein complement(1782601..1782885) Prevotella ruminicola 23 9001700 YP_003574795.1 CDS PRU_1490 NC_014033.1 1783149 1783589 R identified by glimmer; hypothetical protein complement(1783149..1783589) Prevotella ruminicola 23 9000691 YP_003574796.1 CDS PRU_1491 NC_014033.1 1783603 1784103 R identified by similarity to SP:Q9D4H2; hypothetical protein complement(1783603..1784103) Prevotella ruminicola 23 9001644 YP_003574797.1 CDS PRU_1492 NC_014033.1 1784282 1785172 R identified by similarity to GB:AAO77616.1; hypothetical protein complement(1784282..1785172) Prevotella ruminicola 23 9000828 YP_003574798.1 CDS PRU_1493 NC_014033.1 1785321 1786892 R identified by match to protein family HMM PF02368; Ig-like protein complement(1785321..1786892) Prevotella ruminicola 23 9000391 YP_003574799.1 CDS PRU_1494 NC_014033.1 1787470 1788006 D identified by match to protein family HMM TIGR01201; histone-like DNA-binding protein 1787470..1788006 Prevotella ruminicola 23 9002376 YP_003574800.1 CDS PRU_1495 NC_014033.1 1788279 1789529 R identified by similarity to GB:CAG73047.1; match to protein family HMM PF07804; match to protein family HMM PF07805; HipA domain-containing protein complement(1788279..1789529) Prevotella ruminicola 23 9000896 YP_003574801.1 CDS PRU_1496 NC_014033.1 1789526 1789825 R identified by similarity to GB:AAM54968.1; hypothetical protein complement(1789526..1789825) Prevotella ruminicola 23 9000280 YP_003574802.1 CDS PRU_1497 NC_014033.1 1789901 1791052 R identified by match to protein family HMM PF00657; lipase/acylhydrolase complement(1789901..1791052) Prevotella ruminicola 23 9002099 YP_003574803.1 CDS PRU_1498 NC_014033.1 1791074 1791448 R identified by match to protein family HMM PF03061; thioesterase family protein complement(1791074..1791448) Prevotella ruminicola 23 9001490 YP_003574804.1 CDS PRU_1499 NC_014033.1 1791567 1791869 D identified by similarity to GB:AAN81742.1; hypothetical protein 1791567..1791869 Prevotella ruminicola 23 9000791 YP_003574805.1 CDS PRU_1500 NC_014033.1 1791884 1792177 R identified by similarity to GB:AAL64630.1; hypothetical protein complement(1791884..1792177) Prevotella ruminicola 23 9000195 YP_003574806.1 CDS PRU_1501 NC_014033.1 1792180 1792815 R identified by similarity to GB:AAO36578.1; match to protein family HMM PF06555; hypothetical protein complement(1792180..1792815) Prevotella ruminicola 23 9002439 YP_003574807.1 CDS PRU_1502 NC_014033.1 1793005 1793403 D identified by match to protein family HMM PF00583; GNAT family acetyltransferase 1793005..1793403 Prevotella ruminicola 23 9001094 YP_003574808.1 CDS PRU_1503 NC_014033.1 1793423 1794325 R identified by match to protein family HMM PF00165; AraC family transcriptional regulator complement(1793423..1794325) Prevotella ruminicola 23 9000152 YP_003574809.1 CDS PRU_1504 NC_014033.1 1794541 1795419 D identified by match to protein family HMM PF00037; iron-sulfur cluster-binding protein 1794541..1795419 Prevotella ruminicola 23 9001212 YP_003574810.1 CDS PRU_1505 NC_014033.1 1795575 1795898 D identified by match to protein family HMM PF03992; antibiotic biosynthesis monooxygenase family protein 1795575..1795898 Prevotella ruminicola 23 9001841 YP_003574811.1 CDS PRU_1506 NC_014033.1 1795931 1796476 D identified by similarity to GB:AAO76502.1; hypothetical protein 1795931..1796476 Prevotella ruminicola 23 9001823 YP_003574812.1 CDS PRU_1507 NC_014033.1 1796509 1797612 D identified by similarity to PIR:G83368; match to protein family HMM PF02129; hypothetical protein 1796509..1797612 Prevotella ruminicola 23 9002429 YP_003574813.1 CDS PRU_1508 NC_014033.1 1797899 1798759 D identified by glimmer; hypothetical protein 1797899..1798759 Prevotella ruminicola 23 9000924 YP_003574814.1 CDS PRU_1509 NC_014033.1 1798756 1799421 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1798756..1799421 Prevotella ruminicola 23 9001447 YP_003574815.1 CDS PRU_1510 NC_014033.1 1799581 1800078 D identified by match to protein family HMM PF03061; thioesterase family protein 1799581..1800078 Prevotella ruminicola 23 9001630 YP_003574816.1 CDS PRU_1511 NC_014033.1 1800100 1800594 D identified by similarity to GB:CAC87154.1; hypothetical protein 1800100..1800594 Prevotella ruminicola 23 9002284 YP_003574817.1 CDS ppdK NC_014033.1 1800653 1803373 R identified by similarity to SP:P22983; match to protein family HMM PF00391; match to protein family HMM PF01326; match to protein family HMM PF02896; match to protein family HMM TIGR01828; pyruvate, phosphate dikinase complement(1800653..1803373) Prevotella ruminicola 23 9002519 YP_003574818.1 CDS rumA NC_014033.1 1803575 1805026 D identified by match to protein family HMM PF05958; match to protein family HMM TIGR00479; 23S rRNA (uracil-5-)-methyltransferase RumA 1803575..1805026 Prevotella ruminicola 23 9000621 YP_003574819.1 CDS PRU_1514 NC_014033.1 1805143 1806321 D identified by similarity to GB:AAO76781.1; match to protein family HMM PF07396; hypothetical protein 1805143..1806321 Prevotella ruminicola 23 9001740 YP_003574820.1 CDS PRU_1515 NC_014033.1 1806282 1807739 R identified by match to protein family HMM PF01943; polysaccharide biosynthesis protein complement(1806282..1807739) Prevotella ruminicola 23 9000515 YP_003574821.1 CDS PRU_1516 NC_014033.1 1807796 1808785 D identified by match to protein family HMM PF00535; group 2 family glycosyltransferase 1807796..1808785 Prevotella ruminicola 23 9001330 YP_003574822.1 CDS PRU_1517 NC_014033.1 1808782 1809897 D identified by similarity to GB:AAK60455.1; hypothetical protein 1808782..1809897 Prevotella ruminicola 23 9002747 YP_003574823.1 CDS PRU_1518 NC_014033.1 1809845 1811017 R identified by match to protein family HMM PF00534; group 1 family glycosyltransferase complement(1809845..1811017) Prevotella ruminicola 23 9000561 YP_003574824.1 CDS rpsP NC_014033.1 1811027 1811569 R identified by similarity to SP:P21474; match to protein family HMM PF00886; match to protein family HMM TIGR00002; 30S ribosomal protein S16 complement(1811027..1811569) Prevotella ruminicola 23 9001955 YP_003574825.1 CDS PRU_1520 NC_014033.1 1811702 1812613 D identified by match to protein family HMM PF00535; group 2 family glycosyltransferase 1811702..1812613 Prevotella ruminicola 23 9000842 YP_003574826.1 CDS PRU_1522 NC_014033.1 1813221 1816358 R identified by similarity to SP:Q56307; match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; match to protein family HMM PF02929; beta-galactosidase complement(1813221..1816358) Prevotella ruminicola 23 9001667 YP_003574827.1 CDS PRU_1523 NC_014033.1 1816481 1817257 R identified by similarity to GB:CAB61226.1; match to protein family HMM PF07605; hypothetical protein complement(1816481..1817257) Prevotella ruminicola 23 9002630 YP_003574828.1 CDS PRU_1524 NC_014033.1 1817434 1818540 R identified by match to protein family HMM PF00534; overlaps another CDS with the same product name; group 1 family glycosyltransferase complement(1817434..1818540) Prevotella ruminicola 23 9002023 YP_003574829.1 CDS PRU_1525 NC_014033.1 1818537 1819598 R identified by match to protein family HMM PF00534; overlaps another CDS with the same product name; group 1 family glycosyltransferase complement(1818537..1819598) Prevotella ruminicola 23 9000837 YP_003574830.1 CDS PRU_1526 NC_014033.1 1819595 1821448 R identified by match to protein family HMM TIGR01681; match to protein family HMM TIGR01686; FkbH domain-containing protein complement(1819595..1821448) Prevotella ruminicola 23 9000377 YP_003574831.1 CDS glf NC_014033.1 1821472 1822602 R identified by similarity to SP:P37747; match to protein family HMM PF03275; match to protein family HMM TIGR00031; UDP-galactopyranose mutase complement(1821472..1822602) Prevotella ruminicola 23 9002092 YP_003574832.1 CDS PRU_1528 NC_014033.1 1822613 1823152 R identified by similarity to PIR:S69192; match to protein family HMM PF00132; serine acetyltransferase complement(1822613..1823152) Prevotella ruminicola 23 9001821 YP_003574833.1 CDS PRU_1529 NC_014033.1 1823152 1824270 R identified by glimmer; hypothetical protein complement(1823152..1824270) Prevotella ruminicola 23 9002694 YP_003574834.1 CDS PRU_1530 NC_014033.1 1824272 1825312 R identified by match to protein family HMM PF00534; group 1 family glycosyltransferase complement(1824272..1825312) Prevotella ruminicola 23 9000557 YP_003574835.1 CDS PRU_1531 NC_014033.1 1825320 1826204 R identified by similarity to GB:CAG67526.1; hypothetical protein complement(1825320..1826204) Prevotella ruminicola 23 9002421 YP_003574836.1 CDS PRU_1532 NC_014033.1 1826246 1827379 R identified by similarity to GB:AAS08118.1; hypothetical protein complement(1826246..1827379) Prevotella ruminicola 23 9001925 YP_003574837.1 CDS PRU_1533 NC_014033.1 1827387 1828712 R hypothetical protein complement(1827387..1828712) Prevotella ruminicola 23 9002717 YP_003574838.1 CDS PRU_1535 NC_014033.1 1829736 1830743 R identified by match to protein family HMM PF00535; group 2 family glycosyltransferase complement(1829736..1830743) Prevotella ruminicola 23 9001134 YP_003574839.1 CDS PRU_1536 NC_014033.1 1830792 1831628 R identified by match to protein family HMM PF04055; radical SAM domain-containing protein complement(1830792..1831628) Prevotella ruminicola 23 9001810 YP_003574840.1 CDS PRU_1537 NC_014033.1 1831615 1833609 R identified by match to protein family HMM PF02901; pyruvate formate lyase family protein complement(1831615..1833609) Prevotella ruminicola 23 9000166 YP_003574841.1 CDS PRU_1538 NC_014033.1 1833611 1835059 R identified by match to protein family HMM PF01943; match to protein family HMM PF03023; PTS system polysaccharide transporter complement(1833611..1835059) Prevotella ruminicola 23 9000555 YP_003574842.1 CDS PRU_1539 NC_014033.1 1835120 1836406 R identified by similarity to GB:AAL62855.1; hypothetical protein complement(1835120..1836406) Prevotella ruminicola 23 9001022 YP_003574843.1 CDS PRU_1540 NC_014033.1 1836403 1837248 R identified by similarity to GB:AAN63793.1; hypothetical protein complement(1836403..1837248) Prevotella ruminicola 23 9002213 YP_003574844.1 CDS PRU_1542 NC_014033.1 1839330 1840391 R identified by similarity to GB:AAC18831.1; similarity to GB:AAD50494.1; match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; polysaccharide biosynthesis protein complement(1839330..1840391) Prevotella ruminicola 23 9000058 YP_003574845.1 CDS PRU_1543 NC_014033.1 1840378 1841115 R identified by match to protein family HMM PF00483; nucleotidyltransferase family protein complement(1840378..1841115) Prevotella ruminicola 23 9001381 YP_003574846.1 CDS PRU_1544 NC_014033.1 1841115 1842257 R identified by similarity to SP:P06976; match to protein family HMM PF00288; match to protein family HMM PF08544; galactokinase complement(1841115..1842257) Prevotella ruminicola 23 9000919 YP_003574847.1 CDS PRU_1545 NC_014033.1 1842961 1843653 R identified by match to protein family HMM PF02357; hypothetical protein complement(1842961..1843653) Prevotella ruminicola 23 9002549 YP_003574848.1 CDS PRU_1546 NC_014033.1 1844688 1845191 D identified by similarity to SP:Q03473; flagellin domain-containing protein 1844688..1845191 Prevotella ruminicola 23 9001785 YP_003574849.1 CDS PRU_1547 NC_014033.1 1845719 1846462 R identified by similarity to PIR:H71144; match to protein family HMM PF08843; hypothetical protein complement(1845719..1846462) Prevotella ruminicola 23 9001316 YP_003574850.1 CDS PRU_1548 NC_014033.1 1846519 1847292 R identified by glimmer; hypothetical protein complement(1846519..1847292) Prevotella ruminicola 23 9000511 YP_003574851.1 CDS ksgA NC_014033.1 1847544 1848335 R identified by match to protein family HMM PF00398; match to protein family HMM TIGR00755; dimethyladenosine transferase complement(1847544..1848335) Prevotella ruminicola 23 9002160 YP_003574852.1 CDS PRU_1550 NC_014033.1 1848778 1849779 D identified by similarity to GB:AAQ65377.1; match to protein family HMM TIGR00374; hypothetical protein 1848778..1849779 Prevotella ruminicola 23 9001368 YP_003574853.1 CDS pepD_2 NC_014033.1 1849783 1851240 D identified by similarity to SP:P15288; match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01893; Xaa-His dipeptidase 1849783..1851240 Prevotella ruminicola 23 9000319 YP_003574854.1 CDS PRU_1552 NC_014033.1 1851515 1852441 D identified by match to protein family HMM PF01544; metal ion transporter, CorA family 1851515..1852441 Prevotella ruminicola 23 9002493 YP_003574855.1 CDS PRU_1553 NC_014033.1 1852559 1854394 D identified by similarity to GB:AAQ66285.1; hypothetical protein 1852559..1854394 Prevotella ruminicola 23 9001829 YP_003574856.1 CDS PRU_1554 NC_014033.1 1854401 1854877 D identified by similarity to SP:O34598; match to protein family HMM PF00383; guanine deaminase 1854401..1854877 Prevotella ruminicola 23 9000599 YP_003574857.1 CDS secG NC_014033.1 1855159 1855539 R identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; preprotein translocase subunit SecG complement(1855159..1855539) Prevotella ruminicola 23 9002793 YP_003574858.1 CDS PRU_1557 NC_014033.1 1855544 1856284 R identified by similarity to GB:AAQ65387.1; hypothetical protein complement(1855544..1856284) Prevotella ruminicola 23 9001520 YP_003574859.1 CDS PRU_1558 NC_014033.1 1856344 1856862 R identified by similarity to GB:AAO79481.1; lipoprotein complement(1856344..1856862) Prevotella ruminicola 23 9002472 YP_003574860.1 CDS PRU_1559 NC_014033.1 1856846 1858096 R identified by match to protein family HMM PF00158; match to protein family HMM PF02954; match to protein family HMM PF07728; sigma-54 dependent transcriptional regulator complement(1856846..1858096) Prevotella ruminicola 23 9000302 YP_003574861.1 CDS PRU_1560 NC_014033.1 1858161 1859165 R identified by similarity to GB:AAO76628.1; hypothetical protein complement(1858161..1859165) Prevotella ruminicola 23 9002707 YP_003574862.1 CDS PRU_1561 NC_014033.1 1859187 1860221 R identified by similarity to SP:P19624; match to protein family HMM PF04166; 4-hydroxythreonine-4-phosphate dehydrogenase complement(1859187..1860221) Prevotella ruminicola 23 9002410 YP_003574863.1 CDS rlmN NC_014033.1 1860239 1861312 R identified by match to protein family HMM PF04055; match to protein family HMM TIGR00048; 23S rRNA m2A2503 methyltransferase complement(1860239..1861312) Prevotella ruminicola 23 9001156 YP_003574864.1 CDS PRU_1563 NC_014033.1 1861415 1865089 D identified by match to protein family HMM PF00535; match to protein family HMM PF08486; match to protein family HMM TIGR02669; group 2 family glycosyltransferase 1861415..1865089 Prevotella ruminicola 23 9001343 YP_003574865.1 CDS PRU_1564 NC_014033.1 1865120 1866388 D transporter 1865120..1866388 Prevotella ruminicola 23 9001734 YP_003574866.1 CDS cysE NC_014033.1 1866494 1867414 R identified by similarity to SP:Q59967; match to protein family HMM PF00132; serine O-acetyltransferase complement(1866494..1867414) Prevotella ruminicola 23 9002138 YP_003574867.1 CDS PRU_1566 NC_014033.1 1867519 1868445 R identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator complement(1867519..1868445) Prevotella ruminicola 23 9000514 YP_003574868.1 CDS PRU_1567 NC_014033.1 1868584 1869300 D identified by match to protein family HMM PF00037; iron-sulfur cluster-binding protein 1868584..1869300 Prevotella ruminicola 23 9002651 YP_003574869.1 CDS PRU_1568 NC_014033.1 1869337 1871694 R identified by match to protein family HMM PF01301; family 35 glycosyl hydrolase complement(1869337..1871694) Prevotella ruminicola 23 9000623 YP_003574870.1 CDS PRU_1569 NC_014033.1 1871782 1873782 R identified by match to protein family HMM PF07980; lipoprotein complement(1871782..1873782) Prevotella ruminicola 23 9000948 YP_003574871.1 CDS PRU_1570 NC_014033.1 1873820 1877116 R identified by similarity to GB:AAA95938.1; match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane protein SusC complement(1873820..1877116) Prevotella ruminicola 23 9001288 YP_003574872.1 CDS PRU_1571 NC_014033.1 1877267 1879225 R identified by match to protein family HMM PF01839; FG-GAP repeat domain-containing protein complement(1877267..1879225) Prevotella ruminicola 23 9002239 YP_003574873.1 CDS PRU_1572 NC_014033.1 1879420 1883586 D identified by match to protein family HMM PF00072; match to protein family HMM PF00165; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF07494; match to protein family HMM PF07495; sensor histidine kinase/DNA-binding response regulator 1879420..1883586 Prevotella ruminicola 23 9001651 YP_003574874.1 CDS PRU_1573 NC_014033.1 1883623 1884045 R identified by similarity to SP:P00806; match to protein family HMM PF01510; N-acetylmuramoyl-L-alanine amidase complement(1883623..1884045) Prevotella ruminicola 23 9000764 YP_003574875.1 CDS PRU_1574 NC_014033.1 1884737 1885309 R identified by match to protein family HMM TIGR01201; histone-like DNA-binding protein complement(1884737..1885309) Prevotella ruminicola 23 9000043 YP_003574876.1 CDS PRU_1575 NC_014033.1 1885938 1887332 R identified by similarity to GB:AAO75389.1; hypothetical protein complement(1885938..1887332) Prevotella ruminicola 23 8999968 YP_003574877.1 CDS PRU_1576 NC_014033.1 1887452 1887748 R lipoprotein complement(1887452..1887748) Prevotella ruminicola 23 9001981 YP_003574878.1 CDS PRU_1577 NC_014033.1 1887835 1888149 R identified by glimmer; hypothetical protein complement(1887835..1888149) Prevotella ruminicola 23 9001282 YP_003574879.1 CDS PRU_1578 NC_014033.1 1888270 1889055 R identified by match to protein family HMM PF02518; sensor histidine kinase complement(1888270..1889055) Prevotella ruminicola 23 9000453 YP_003574880.1 CDS PRU_1579 NC_014033.1 1889056 1889838 R identified by match to protein family HMM PF02518; sensor histidine kinase complement(1889056..1889838) Prevotella ruminicola 23 9000727 YP_003574881.1 CDS PRU_1580 NC_014033.1 1889932 1890411 R identified by similarity to GB:AAO77422.1; hypothetical protein complement(1889932..1890411) Prevotella ruminicola 23 9000192 YP_003574882.1 CDS PRU_1581 NC_014033.1 1890446 1891687 R identified by similarity to PIR:AB2243; hypothetical protein complement(1890446..1891687) Prevotella ruminicola 23 9002538 YP_003574883.1 CDS PRU_1583 NC_014033.1 1892557 1894569 R identified by glimmer; hypothetical protein complement(1892557..1894569) Prevotella ruminicola 23 9002560 YP_003574884.1 CDS PRU_1584 NC_014033.1 1894667 1896037 R identified by glimmer; hypothetical protein complement(1894667..1896037) Prevotella ruminicola 23 9000253 YP_003574885.1 CDS PRU_1585 NC_014033.1 1896090 1897577 R identified by similarity to GB:AAO79338.1; hypothetical protein complement(1896090..1897577) Prevotella ruminicola 23 9002197 YP_003574886.1 CDS PRU_1586 NC_014033.1 1897620 1898186 R identified by similarity to GB:AAQ67085.1; hypothetical protein complement(1897620..1898186) Prevotella ruminicola 23 9000783 YP_003574887.1 CDS PRU_1587 NC_014033.1 1898299 1899276 D identified by match to protein family HMM PF00589; site-specific recombinase, phage integrase family 1898299..1899276 Prevotella ruminicola 23 9001620 YP_003574888.1 CDS PRU_1589 NC_014033.1 1899712 1899996 D identified by match to protein family HMM PF04605; virulence-associated protein 1899712..1899996 Prevotella ruminicola 23 9002384 YP_003574889.1 CDS PRU_1590 NC_014033.1 1900165 1902300 R identified by match to protein family HMM PF07980; lipoprotein complement(1900165..1902300) Prevotella ruminicola 23 9000009 YP_003574890.1 CDS PRU_1591 NC_014033.1 1902340 1905423 R identified by similarity to GB:CAA10226.1; match to protein family HMM PF00593; match to protein family HMM PF07715; receptor antigen RagA complement(1902340..1905423) Prevotella ruminicola 23 9001869 YP_003574891.1 CDS PRU_1592 NC_014033.1 1905608 1906762 R identified by similarity to PIR:C69797; hypothetical protein complement(1905608..1906762) Prevotella ruminicola 23 9002653 YP_003574892.1 CDS PRU_1593 NC_014033.1 1907005 1909341 D identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; family 2 glycosyl hydrolase 1907005..1909341 Prevotella ruminicola 23 8999986 YP_003574893.1 CDS PRU_1595 NC_014033.1 1910512 1912926 D identified by match to protein family HMM PF02837; sugar binding domain-containing protein 1910512..1912926 Prevotella ruminicola 23 9001116 YP_003574894.1 CDS PRU_1596 NC_014033.1 1913120 1916347 D identified by similarity to GB:AAA95938.1; match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane protein SusC 1913120..1916347 Prevotella ruminicola 23 9001922 YP_003574895.1 CDS PRU_1597 NC_014033.1 1916367 1918178 D identified by match to protein family HMM PF07980; lipoprotein 1916367..1918178 Prevotella ruminicola 23 9000228 YP_003574896.1 CDS PRU_1598 NC_014033.1 1918209 1919771 D identified by match to protein family HMM PF00041; fibronectin type III domain-containing protein 1918209..1919771 Prevotella ruminicola 23 9000312 YP_003574897.1 CDS PRU_1599 NC_014033.1 1919828 1920709 R identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein complement(1919828..1920709) Prevotella ruminicola 23 9002722 YP_003574898.1 CDS PRU_1600 NC_014033.1 1920788 1922317 R identified by match to protein family HMM PF00135; carboxylesterase family protein complement(1920788..1922317) Prevotella ruminicola 23 9001525 YP_003574899.1 CDS PRU_1602 NC_014033.1 1925658 1927262 D identified by similarity to SP:P33231; similarity to SP:Q46839; match to protein family HMM PF02652; match to protein family HMM TIGR00795; lactate permease (LctP) family transporter 1925658..1927262 Prevotella ruminicola 23 9000329 YP_003574900.1 CDS PRU_1603 NC_014033.1 1927255 1928094 R identified by glimmer; hypothetical protein complement(1927255..1928094) Prevotella ruminicola 23 9002498 YP_003574901.1 CDS PRU_1604 NC_014033.1 1928149 1929471 D identified by match to protein family HMM PF07690; MFS transporter 1928149..1929471 Prevotella ruminicola 23 9000719 YP_003574902.1 CDS PRU_1605 NC_014033.1 1929481 1930269 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(1929481..1930269) Prevotella ruminicola 23 9000225 YP_003574903.1 CDS PRU_1606 NC_014033.1 1930403 1930816 R identified by similarity to PIR:S71188; match to protein family HMM PF00011; heat shock protein, class I complement(1930403..1930816) Prevotella ruminicola 23 9000833 YP_003574904.1 CDS mfd NC_014033.1 1930939 1934307 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM TIGR00580; transcription-repair coupling factor complement(1930939..1934307) Prevotella ruminicola 23 9001336 YP_003574905.1 CDS PRU_1608 NC_014033.1 1934624 1935058 R identified by similarity to GB:AAO75722.1; hypothetical protein complement(1934624..1935058) Prevotella ruminicola 23 9000198 YP_003574906.1 CDS PRU_1610 NC_014033.1 1935883 1936632 D identified by match to protein family HMM PF00535; group 2 family glycosyltransferase 1935883..1936632 Prevotella ruminicola 23 9001711 YP_003574907.1 CDS PRU_1611 NC_014033.1 1936652 1937413 D identified by match to protein family HMM PF01553; 1-acyl-sn-glycerol-3-phosphate acyltransferase 1936652..1937413 Prevotella ruminicola 23 9000480 YP_003574908.1 CDS PRU_1612 NC_014033.1 1937410 1938345 D identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein 1937410..1938345 Prevotella ruminicola 23 9001403 YP_003574909.1 CDS PRU_1613 NC_014033.1 1938356 1939171 R identified by match to protein family HMM PF02965; vitamin B12 dependent methionine synthase, activation domain-containing protein complement(1938356..1939171) Prevotella ruminicola 23 9001295 YP_003574910.1 CDS pyrC NC_014033.1 1939168 1940499 R identified by match to protein family HMM PF01979; match to protein family HMM TIGR00857; dihydroorotase complement(1939168..1940499) Prevotella ruminicola 23 9000074 YP_003574911.1 CDS PRU_1615 NC_014033.1 1940465 1941238 R identified by similarity to GB:AAO75346.1; lipoprotein complement(1940465..1941238) Prevotella ruminicola 23 9000111 YP_003574912.1 CDS PRU_1616 NC_014033.1 1941329 1941727 R hypothetical protein complement(1941329..1941727) Prevotella ruminicola 23 9000748 YP_003574913.1 CDS PRU_1617 NC_014033.1 1941711 1942070 R identified by similarity to GB:AAQ66717.1; match to protein family HMM PF04977; hypothetical protein complement(1941711..1942070) Prevotella ruminicola 23 9000013 YP_003574914.1 CDS dnaX NC_014033.1 1942215 1944020 D identified by match to protein family HMM PF00004; match to protein family HMM PF06144; match to protein family HMM TIGR02397; DNA polymerase III subunits gamma and tau 1942215..1944020 Prevotella ruminicola 23 9002370 YP_003574915.1 CDS PRU_1619 NC_014033.1 1944051 1944407 R identified by match to protein family HMM PF00072; response regulator complement(1944051..1944407) Prevotella ruminicola 23 9001642 YP_003574916.1 CDS xylE NC_014033.1 1944419 1945900 R identified by similarity to SP:P09098; match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00879; D-xylose:proton symporter complement(1944419..1945900) Prevotella ruminicola 23 9000313 YP_003574917.1 CDS PRU_1621 NC_014033.1 1945903 1947738 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(1945903..1947738) Prevotella ruminicola 23 9002647 YP_003574918.1 CDS PRU_1622 NC_014033.1 1947900 1949909 D identified by similarity to SP:P82593; match to protein family HMM PF02018; match to protein family HMM PF06964; alpha-N-arabinofuranosidase 1947900..1949909 Prevotella ruminicola 23 9002038 YP_003574919.1 CDS PRU_1623 NC_014033.1 1950158 1951048 D identified by glimmer; hypothetical protein 1950158..1951048 Prevotella ruminicola 23 9000010 YP_003574920.1 CDS PRU_1624 NC_014033.1 1951052 1951897 R identified by similarity to GB:AAQ66211.1; hypothetical protein complement(1951052..1951897) Prevotella ruminicola 23 9001253 YP_003574921.1 CDS PRU_1625 NC_014033.1 1952019 1954355 D identified by match to protein family HMM PF00924; mechanosensitive ion channel family protein 1952019..1954355 Prevotella ruminicola 23 9001886 YP_003574922.1 CDS kdsA_2 NC_014033.1 1954461 1955216 D identified by similarity to SP:O66496; match to protein family HMM PF00793; match to protein family HMM TIGR01362; 3-deoxy-8-phosphooctulonate synthase 1954461..1955216 Prevotella ruminicola 23 9000883 YP_003574923.1 CDS PRU_1627 NC_014033.1 1955226 1956176 D identified by match to protein family HMM PF00571; match to protein family HMM PF01380; match to protein family HMM TIGR00393; sugar isomerase, KpsF/GutQ family 1955226..1956176 Prevotella ruminicola 23 9000284 YP_003574924.1 CDS PRU_1628 NC_014033.1 1956199 1959978 D identified by match to protein family HMM PF00072; match to protein family HMM PF00165; match to protein family HMM PF00512; match to protein family HMM PF07494; match to protein family HMM PF07495; DNA-binding sensor histidine kinase/response regulator 1956199..1959978 Prevotella ruminicola 23 9002129 YP_003574925.1 CDS PRU_1629 NC_014033.1 1959975 1961210 D identified by match to protein family HMM PF00614; phospholipase D 1959975..1961210 Prevotella ruminicola 23 9001508 YP_003574926.1 CDS PRU_1630 NC_014033.1 1961217 1962371 D identified by match to protein family HMM PF01757; acyltransferase family protein 1961217..1962371 Prevotella ruminicola 23 9000497 YP_003574927.1 CDS PRU_1631 NC_014033.1 1962316 1964505 R identified by similarity to GB:AAO76782.1; hypothetical protein complement(1962316..1964505) Prevotella ruminicola 23 9002695 YP_003574928.1 CDS PRU_1632 NC_014033.1 1964509 1965468 R identified by similarity to GB:AAQ66441.1; lipoprotein complement(1964509..1965468) Prevotella ruminicola 23 9001745 YP_003574929.1 CDS radA NC_014033.1 1965516 1966916 D identified by match to protein family HMM TIGR00416; DNA repair protein RadA 1965516..1966916 Prevotella ruminicola 23 9000881 YP_003574930.1 CDS pgk NC_014033.1 1967076 1968347 D identified by match to protein family HMM PF00162; phosphoglycerate kinase 1967076..1968347 Prevotella ruminicola 23 9000298 YP_003574931.1 CDS PRU_1635 NC_014033.1 1968519 1970450 D identified by similarity to GB:AAC44671.1; alpha-glucosidase family protein 1968519..1970450 Prevotella ruminicola 23 9002259 YP_003574932.1 CDS PRU_1636 NC_014033.1 1970599 1973334 D identified by match to protein family HMM PF00005; match to protein family HMM PF00528; match to protein family HMM TIGR01726; amino acid ABC transporter ATP-binding protein/permease 1970599..1973334 Prevotella ruminicola 23 9001100 YP_003574933.1 CDS PRU_1638 NC_014033.1 1974529 1975581 R identified by similarity to GB:AAM04131.1; match to protein family HMM PF01266; match to protein family HMM PF01494; match to protein family HMM PF07992; hypothetical protein complement(1974529..1975581) Prevotella ruminicola 23 9002090 YP_003574934.1 CDS mutB NC_014033.1 1975584 1977749 R identified by similarity to SP:Q05065; match to protein family HMM PF01642; match to protein family HMM PF02310; match to protein family HMM TIGR00640; match to protein family HMM TIGR00641; methylmalonyl-CoA mutase large subunit complement(1975584..1977749) Prevotella ruminicola 23 9001225 YP_003574935.1 CDS mutA NC_014033.1 1977769 1979631 R identified by match to protein family HMM PF01642; match to protein family HMM TIGR00642; methylmalonyl-CoA mutase small subunit complement(1977769..1979631) Prevotella ruminicola 23 9000086 YP_003574936.1 CDS PRU_1641 NC_014033.1 1979861 1981552 D identified by match to protein family HMM PF02080; match to protein family HMM PF06826; match to protein family HMM TIGR01625; aspartate:alanine exchanger (AAE) family transporter 1979861..1981552 Prevotella ruminicola 23 9002553 YP_003574937.1 CDS PRU_1642 NC_014033.1 1981593 1982618 D identified by similarity to GB:AAQ66639.1; hypothetical protein 1981593..1982618 Prevotella ruminicola 23 9001790 YP_003574938.1 CDS PRU_1643 NC_014033.1 1982624 1983076 D identified by match to protein family HMM PF00364; biotin carboxyl carrier protein 1982624..1983076 Prevotella ruminicola 23 9000852 YP_003574939.1 CDS PRU_1644 NC_014033.1 1983148 1984305 D identified by similarity to SP:P13156; match to protein family HMM PF03977; match to protein family HMM TIGR01109; sodium ion-translocating decarboxylase subunit beta 1983148..1984305 Prevotella ruminicola 23 9000237 YP_003574940.1 CDS PRU_1645 NC_014033.1 1984302 1984895 D identified by match to protein family HMM PF00196; LuxR family transcriptional regulator 1984302..1984895 Prevotella ruminicola 23 9002094 YP_003574941.1 CDS PRU_1646 NC_014033.1 1985008 1986447 D identified by similarity to SP:P24214; match to protein family HMM PF01232; match to protein family HMM PF08125; tagaturonate reductase 1985008..1986447 Prevotella ruminicola 23 9000339 YP_003574942.1 CDS uvrA_2 NC_014033.1 1986454 1989249 D identified by match to protein family HMM PF00005; match to protein family HMM TIGR00630; excinuclease ABC subunit A 1986454..1989249 Prevotella ruminicola 23 9001268 YP_003574943.1 CDS PRU_1648 NC_014033.1 1989266 1991299 D identified by similarity to GB:AAO79446.1; hypothetical protein 1989266..1991299 Prevotella ruminicola 23 9000637 YP_003574944.1 CDS PRU_1649 NC_014033.1 1991293 1994520 D identified by match to protein family HMM PF00580; UvrD/REP family ATP-dependent DNA helicase 1991293..1994520 Prevotella ruminicola 23 9001369 YP_003574945.1 CDS PRU_1650 NC_014033.1 1994549 1997188 D identified by similarity to GB:AAO76164.1; hypothetical protein 1994549..1997188 Prevotella ruminicola 23 9000747 YP_003574946.1 CDS PRU_1651 NC_014033.1 1997189 1998364 R identified by match to protein family HMM PF07690; MFS transporter complement(1997189..1998364) Prevotella ruminicola 23 9000424 YP_003574947.1 CDS PRU_1652 NC_014033.1 1998454 1999287 D identified by similarity to GB:AAO76251.1; lipoprotein 1998454..1999287 Prevotella ruminicola 23 9002020 YP_003574948.1 CDS gidB NC_014033.1 1999284 1999910 D identified by match to protein family HMM PF02527; match to protein family HMM TIGR00138; methyltransferase GidB 1999284..1999910 Prevotella ruminicola 23 9001051 YP_003574949.1 CDS PRU_1654 NC_014033.1 1999910 2000557 D identified by match to protein family HMM PF00753; metallo-beta-lactamase family protein 1999910..2000557 Prevotella ruminicola 23 9000261 YP_003574950.1 CDS PRU_1655 NC_014033.1 2000574 2002271 R identified by match to protein family HMM PF00860; match to protein family HMM PF00916; match to protein family HMM PF01740; match to protein family HMM TIGR00815; sulfate permease complement(2000574..2002271) Prevotella ruminicola 23 9001075 YP_003574951.1 CDS PRU_1656 NC_014033.1 2002415 2003062 D lipoprotein 2002415..2003062 Prevotella ruminicola 23 9001273 YP_003574952.1 CDS xth NC_014033.1 2003075 2003824 R identified by match to protein family HMM PF03372; match to protein family HMM TIGR00195; match to protein family HMM TIGR00633; exodeoxyribonuclease III complement(2003075..2003824) Prevotella ruminicola 23 9000790 YP_003574953.1 CDS PRU_1658 NC_014033.1 2003781 2004887 R cache domain-containing protein complement(2003781..2004887) Prevotella ruminicola 23 9001421 YP_003574954.1 CDS PRU_1659 NC_014033.1 2004975 2006387 R identified by match to protein family HMM PF03065; family 57 glycosyl hydrolase complement(2004975..2006387) Prevotella ruminicola 23 9002379 YP_003574955.1 CDS PRU_1660 NC_014033.1 2006427 2007695 R identified by match to protein family HMM PF00534; group 1 family glycosyltransferase complement(2006427..2007695) Prevotella ruminicola 23 9001148 YP_003574956.1 CDS PRU_1661 NC_014033.1 2007708 2009627 R identified by match to protein family HMM PF06202; glycogen debranching enzyme family protein complement(2007708..2009627) Prevotella ruminicola 23 9001843 YP_003574957.1 CDS PRU_1662 NC_014033.1 2009810 2010745 R identified by similarity to GB:AAM25891.1; match to protein family HMM PF00781; hypothetical protein complement(2009810..2010745) Prevotella ruminicola 23 9002635 YP_003574958.1 CDS miaA_2 NC_014033.1 2010797 2011714 R identified by match to protein family HMM PF01715; match to protein family HMM TIGR00174; tRNA isopentenyltransferase complement(2010797..2011714) Prevotella ruminicola 23 9000334 YP_003574959.1 CDS PRU_1664 NC_014033.1 2011719 2012738 R identified by match to protein family HMM PF00004; AAA family ATPase complement(2011719..2012738) Prevotella ruminicola 23 9000570 YP_003574960.1 CDS PRU_1665 NC_014033.1 2012742 2014121 R identified by similarity to GB:BAB49913.1; match to protein family HMM PF07787; hypothetical protein complement(2012742..2014121) Prevotella ruminicola 23 9001919 YP_003574961.1 CDS PRU_1666 NC_014033.1 2014167 2015651 R identified by match to protein family HMM PF00149; match to protein family HMM PF02872; 5'-nucleotidase family protein complement(2014167..2015651) Prevotella ruminicola 23 9000068 YP_003574962.1 CDS PRU_1667 NC_014033.1 2015931 2017574 R identified by similarity to GB:AAN24150.1; hypothetical protein complement(2015931..2017574) Prevotella ruminicola 23 9000163 YP_003574963.1 CDS PRU_1668 NC_014033.1 2017715 2018119 D identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; thioesterase family protein 2017715..2018119 Prevotella ruminicola 23 9000923 YP_003574964.1 CDS PRU_1669 NC_014033.1 2018142 2018714 D identified by similarity to GB:AAO36036.1; match to protein family HMM PF00578; match to protein family HMM PF08534; hypothetical protein 2018142..2018714 Prevotella ruminicola 23 9002101 YP_003574965.1 CDS PRU_1670 NC_014033.1 2019283 2019456 D identified by glimmer; hypothetical protein 2019283..2019456 Prevotella ruminicola 23 9000106 YP_003574966.1 CDS PRU_1671 NC_014033.1 2019481 2019597 D identified by glimmer; hypothetical protein 2019481..2019597 Prevotella ruminicola 23 9000767 YP_003574967.1 CDS PRU_1672 NC_014033.1 2019769 2020326 D identified by similarity to GB:AAO75752.1; hypothetical protein 2019769..2020326 Prevotella ruminicola 23 9001231 YP_003574968.1 CDS PRU_1673 NC_014033.1 2020402 2021520 R identified by similarity to GB:AAF87662.1; lipase domain-containing protein complement(2020402..2021520) Prevotella ruminicola 23 9001561 YP_003574969.1 CDS gap NC_014033.1 2021567 2022592 R identified by match to protein family HMM PF00044; match to protein family HMM PF02800; match to protein family HMM TIGR01534; glyceraldehyde-3-phosphate dehydrogenase, type I complement(2021567..2022592) Prevotella ruminicola 23 9002751 YP_003574970.1 CDS mscL NC_014033.1 2022852 2023250 D identified by similarity to SP:P23867; match to protein family HMM PF01741; match to protein family HMM TIGR00220; large conductance mechanosensitive channel protein 2022852..2023250 Prevotella ruminicola 23 9000846 YP_003574971.1 CDS PRU_1676 NC_014033.1 2023289 2025049 R identified by match to protein family HMM PF07980; lipoprotein complement(2023289..2025049) Prevotella ruminicola 23 9000359 YP_003574972.1 CDS PRU_1677 NC_014033.1 2025063 2028230 R identified by similarity to GB:AAO79829.1; match to protein family HMM PF00593; match to protein family HMM PF07715; TonB dependent receptor complement(2025063..2028230) Prevotella ruminicola 23 9001168 YP_003574973.1 CDS guaA NC_014033.1 2028490 2030094 R identified by similarity to SP:P04079; match to protein family HMM PF00117; match to protein family HMM PF00958; match to protein family HMM PF06508; match to protein family HMM TIGR00884; match to protein family HMM TIGR00888; GMP synthase (glutamine-hydrolyzing) complement(2028490..2030094) Prevotella ruminicola 23 9001196 YP_003574974.1 CDS PRU_1679 NC_014033.1 2030119 2030892 R identified by match to protein family HMM PF00483; nucleotidyltransferase family protein complement(2030119..2030892) Prevotella ruminicola 23 9002018 YP_003574975.1 CDS PRU_1680 NC_014033.1 2030987 2033947 R identified by similarity to GB:BAD47496.1; hypothetical protein complement(2030987..2033947) Prevotella ruminicola 23 9002603 YP_003574976.1 CDS aroB NC_014033.1 2034104 2035153 D identified by match to protein family HMM PF01761; 3-dehydroquinate synthase 2034104..2035153 Prevotella ruminicola 23 9000133 YP_003574977.1 CDS PRU_1682 NC_014033.1 2035246 2036241 R identified by similarity to GB:AAQ66561.1; O-succinylbenzoic acid--CoA ligase-like protein complement(2035246..2036241) Prevotella ruminicola 23 9001641 YP_003574978.1 CDS menC NC_014033.1 2036229 2037245 R identified by match to protein family HMM PF01188; match to protein family HMM TIGR01927; o-succinylbenzoic acid synthetase complement(2036229..2037245) Prevotella ruminicola 23 9002271 YP_003574979.1 CDS menB NC_014033.1 2037351 2038202 R identified by similarity to SP:P27290; match to protein family HMM PF00378; match to protein family HMM TIGR01929; naphthoate synthase complement(2037351..2038202) Prevotella ruminicola 23 9001662 YP_003574980.1 CDS menD NC_014033.1 2038171 2039862 R identified by similarity to SP:P17109; match to protein family HMM PF02776; match to protein family HMM TIGR00173; 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylic acid synthase/2-oxoglutarate decarboxylase complement(2038171..2039862) Prevotella ruminicola 23 9002253 YP_003574981.1 CDS menF NC_014033.1 2039849 2040889 R identified by similarity to SP:P38051; match to protein family HMM PF00425; menaquinone-specific isochorismate synthase complement(2039849..2040889) Prevotella ruminicola 23 9000188 YP_003574982.1 CDS PRU_1687 NC_014033.1 2040889 2041302 R identified by match to protein family HMM PF03061; match to protein family HMM TIGR00369; thioesterase family protein complement(2040889..2041302) Prevotella ruminicola 23 9000974 YP_003574983.1 CDS PRU_1688 NC_014033.1 2041343 2042323 R identified by match to protein family HMM PF00480; ROK family protein complement(2041343..2042323) Prevotella ruminicola 23 9001855 YP_003574984.1 CDS PRU_1689 NC_014033.1 2042341 2043339 R identified by match to protein family HMM PF00480; ROK family transcriptional regulator complement(2042341..2043339) Prevotella ruminicola 23 9000216 YP_003574985.1 CDS PRU_1690 NC_014033.1 2043352 2044332 R identified by match to protein family HMM PF00480; ROK family protein complement(2043352..2044332) Prevotella ruminicola 23 9001069 YP_003574986.1 CDS lysS NC_014033.1 2044489 2046216 D identified by similarity to SP:P13030; match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499; lysine--tRNA ligase 2044489..2046216 Prevotella ruminicola 23 9000618 YP_003574987.1 CDS PRU_1692 NC_014033.1 2046245 2047240 D identified by match to protein family HMM PF01210; match to protein family HMM PF07479; glycerol-3-phosphate dehydrogenase 2046245..2047240 Prevotella ruminicola 23 9002563 YP_003574988.1 CDS PRU_1693 NC_014033.1 2047270 2048004 D identified by similarity to GB:CAE79507.1; match to protein family HMM PF08713; hypothetical protein 2047270..2048004 Prevotella ruminicola 23 9001946 YP_003574989.1 CDS PRU_1694 NC_014033.1 2048007 2048552 R identified by match to protein family HMM PF03358; NADPH-dependent reductase complement(2048007..2048552) Prevotella ruminicola 23 9002708 YP_003574990.1 CDS PRU_1695 NC_014033.1 2048569 2048961 R identified by match to protein family HMM PF01035; match to protein family HMM TIGR00589; methylated-DNA--[protein]-cysteine S-methyltransferase complement(2048569..2048961) Prevotella ruminicola 23 8999992 YP_003574991.1 CDS PRU_1696 NC_014033.1 2048945 2050009 R identified by match to protein family HMM PF02595; match to protein family HMM TIGR00045; glycerate kinase family protein complement(2048945..2050009) Prevotella ruminicola 23 9000775 YP_003574992.1 CDS PRU_1697 NC_014033.1 2050010 2051176 R identified by match to protein family HMM PF00258; match to protein family HMM PF00753; metallo-beta-lactamase family protein complement(2050010..2051176) Prevotella ruminicola 23 9001691 YP_003574993.1 CDS PRU_1698 NC_014033.1 2051381 2051833 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 2051381..2051833 Prevotella ruminicola 23 9002286 YP_003574994.1 CDS PRU_1699 NC_014033.1 2051830 2052780 R identified by similarity to GB:AAO77247.1; hypothetical protein complement(2051830..2052780) Prevotella ruminicola 23 9001018 YP_003574995.1 CDS metF NC_014033.1 2052840 2053805 D identified by similarity to GB:AAF64321.1; match to protein family HMM PF02219; methylenetetrahydrofolate reductase (NAD(P)H) 2052840..2053805 Prevotella ruminicola 23 9001778 YP_003574996.1 CDS PRU_1701 NC_014033.1 2053812 2054924 D identified by similarity to SP:P37540; DNA polymerase III, delta prime subunit 2053812..2054924 Prevotella ruminicola 23 9001338 YP_003574997.1 CDS PRU_1702 NC_014033.1 2054951 2056102 D identified by similarity to GB:AAO78924.1; match to protein family HMM PF04468; hypothetical protein 2054951..2056102 Prevotella ruminicola 23 9001898 YP_003574998.1 CDS PRU_1703 NC_014033.1 2056125 2056556 D identified by similarity to GB:AAO78923.1; hypothetical protein 2056125..2056556 Prevotella ruminicola 23 9002696 YP_003574999.1 CDS PRU_1704 NC_014033.1 2056542 2058017 R identified by match to protein family HMM PF01098; FtsW/RodA/SpoVE family cell cycle protein complement(2056542..2058017) Prevotella ruminicola 23 9000929 YP_003575000.1 CDS PRU_1705 NC_014033.1 2057998 2059857 R identified by match to protein family HMM PF00905; match to protein family HMM PF03717; match to protein family HMM TIGR03423; penicillin-binding protein complement(2057998..2059857) Prevotella ruminicola 23 9000014 YP_003575001.1 CDS PRU_1706 NC_014033.1 2059854 2060354 R identified by match to protein family HMM TIGR03426; hypothetical protein complement(2059854..2060354) Prevotella ruminicola 23 9002291 YP_003575002.1 CDS mreC NC_014033.1 2060359 2061228 R identified by similarity to SP:Q01466; match to protein family HMM PF04085; rod shape-determining protein complement(2060359..2061228) Prevotella ruminicola 23 9001501 YP_003575003.1 CDS mreB NC_014033.1 2061250 2062272 R identified by match to protein family HMM PF02491; match to protein family HMM PF06723; match to protein family HMM TIGR00904; rod shape-determining protein MreB complement(2061250..2062272) Prevotella ruminicola 23 9001266 YP_003575004.1 CDS PRU_1709 NC_014033.1 2062311 2062913 R identified by similarity to SP:P15639; match to protein family HMM PF02142; IMP cyclohydrolase complement(2062311..2062913) Prevotella ruminicola 23 9001659 YP_003575005.1 CDS PRU_1710 NC_014033.1 2063037 2063561 R lipoprotein complement(2063037..2063561) Prevotella ruminicola 23 9002517 YP_003575006.1 CDS asnA NC_014033.1 2063585 2064622 R identified by similarity to SP:P00963; match to protein family HMM PF03590; match to protein family HMM TIGR00669; aspartate--ammonia ligase complement(2063585..2064622) Prevotella ruminicola 23 9000782 YP_003575007.1 CDS PRU_1712 NC_014033.1 2065120 2066571 R identified by match to protein family HMM PF00361; match to protein family HMM TIGR01770; proton-translocating NADH-quinone oxidoreductase N subunit complement(2065120..2066571) Prevotella ruminicola 23 9001280 YP_003575008.1 CDS PRU_1713 NC_014033.1 2066591 2068111 R identified by match to protein family HMM PF00361; match to protein family HMM TIGR01972; proton-translocating NADH-quinone oxidoreductase subunit M complement(2066591..2068111) Prevotella ruminicola 23 9001672 YP_003575009.1 CDS PRU_1714 NC_014033.1 2068116 2070104 R identified by match to protein family HMM PF00361; match to protein family HMM PF00662; match to protein family HMM TIGR01974; proton-translocating NADH-quinone oxidoreductase L subunit complement(2068116..2070104) Prevotella ruminicola 23 9001065 YP_003575010.1 CDS PRU_1715 NC_014033.1 2070142 2070450 R identified by match to protein family HMM PF00420; proton-translocating NADH-quinone oxidoreductase K subunit complement(2070142..2070450) Prevotella ruminicola 23 9000389 YP_003575011.1 CDS PRU_1716 NC_014033.1 2070447 2070962 R identified by match to protein family HMM PF00499; proton-translocating NADH-quinone oxidoreductase J subunit complement(2070447..2070962) Prevotella ruminicola 23 9002628 YP_003575012.1 CDS PRU_1717 NC_014033.1 2070969 2071514 R identified by match to protein family HMM PF00037; proton-translocating NADH-quinone oxidoreductase I subunit complement(2070969..2071514) Prevotella ruminicola 23 9002042 YP_003575013.1 CDS PRU_1718 NC_014033.1 2071524 2072612 R identified by match to protein family HMM PF00146; proton-translocating NADH-quinone oxidoreductase H subunit complement(2071524..2072612) Prevotella ruminicola 23 9001020 YP_003575014.1 CDS PRU_1719 NC_014033.1 2072652 2074217 R identified by match to protein family HMM PF00329; match to protein family HMM PF00346; proton-translocating NADH-quinone oxidoreductase D subunit complement(2072652..2074217) Prevotella ruminicola 23 9001655 YP_003575015.1 CDS PRU_1720 NC_014033.1 2074214 2075005 R identified by match to protein family HMM PF01058; match to protein family HMM TIGR01957; proton-translocating NADH-quinone oxidoreductase subunit B complement(2074214..2075005) Prevotella ruminicola 23 9000146 YP_003575016.1 CDS PRU_1721 NC_014033.1 2074996 2075346 R identified by match to protein family HMM PF00507; proton-translocating NADH-quinone oxidoreductase subunit A complement(2074996..2075346) Prevotella ruminicola 23 9002350 YP_003575017.1 CDS PRU_1722 NC_014033.1 2075401 2076912 R identified by similarity to GB:AAA74034.1; match to protein family HMM PF01663; alkaline phosphatase complement(2075401..2076912) Prevotella ruminicola 23 9001732 YP_003575018.1 CDS PRU_1723 NC_014033.1 2076971 2078245 R hypothetical protein complement(2076971..2078245) Prevotella ruminicola 23 9001103 YP_003575019.1 CDS PRU_1724 NC_014033.1 2078242 2079585 R identified by similarity to SP:P30868; match to protein family HMM PF07690; match to protein family HMM TIGR00792; glycoside-pentoside-hexuronide (GPH):cation symporter family sugar transporter complement(2078242..2079585) Prevotella ruminicola 23 9002577 YP_003575020.1 CDS PRU_1725 NC_014033.1 2079618 2080796 R identified by similarity to GB:AAO78134.1; match to protein family HMM PF04041; hypothetical protein complement(2079618..2080796) Prevotella ruminicola 23 9001377 YP_003575021.1 CDS PRU_1726 NC_014033.1 2080818 2082929 R identified by similarity to PDB:1ODS_A; match to protein family HMM PF02156; match to protein family HMM PF05448; family 7 carbohydrate esterase complement(2080818..2082929) Prevotella ruminicola 23 9000743 YP_003575022.1 CDS sodB NC_014033.1 2083536 2084120 R identified by similarity to SP:P19665; match to protein family HMM PF00081; match to protein family HMM PF02777; superoxide dismutase complement(2083536..2084120) Prevotella ruminicola 23 9002283 YP_003575023.1 CDS PRU_1728 NC_014033.1 2084281 2086059 R identified by match to protein family HMM PF01569; PAP2 domain-containing protein complement(2084281..2086059) Prevotella ruminicola 23 9002668 YP_003575024.1 CDS PRU_1729 NC_014033.1 2086096 2087571 R identified by similarity to GB:AAO61842.1; match to protein family HMM PF02397; match to protein family HMM TIGR03025; bacterial sugar transferase family protein complement(2086096..2087571) Prevotella ruminicola 23 9001310 YP_003575025.1 CDS PRU_1731 NC_014033.1 2088387 2089616 R identified by similarity to GB:AAN33150.1; hypothetical protein complement(2088387..2089616) Prevotella ruminicola 23 9001757 YP_003575026.1 CDS PRU_1732 NC_014033.1 2090053 2091024 R identified by glimmer; hypothetical protein complement(2090053..2091024) Prevotella ruminicola 23 9000227 YP_003575027.1 CDS PRU_1733 NC_014033.1 2091507 2091728 R identified by glimmer; hypothetical protein complement(2091507..2091728) Prevotella ruminicola 23 9001621 YP_003575028.1 CDS PRU_1734 NC_014033.1 2091721 2092029 R identified by glimmer; hypothetical protein complement(2091721..2092029) Prevotella ruminicola 23 9002397 YP_003575029.1 CDS PRU_1735 NC_014033.1 2092350 2093132 R identified by similarity to GB:AAO10781.1; hypothetical protein complement(2092350..2093132) Prevotella ruminicola 23 9000015 YP_003575030.1 CDS PRU_1736 NC_014033.1 2093134 2093718 R identified by similarity to PIR:AB0871; hypothetical protein complement(2093134..2093718) Prevotella ruminicola 23 9000777 YP_003575031.1 CDS PRU_1737 NC_014033.1 2094491 2095537 D identified by similarity to PIR:JC5634; match to protein family HMM PF01546; match to protein family HMM PF02127; match to protein family HMM PF05343; M42 subfamily peptidase 2094491..2095537 Prevotella ruminicola 23 9000135 YP_003575032.1 CDS PRU_1739 NC_014033.1 2095787 2097124 D identified by match to protein family HMM PF04055; Fe-S oxidoreductase 2095787..2097124 Prevotella ruminicola 23 9001497 YP_003575033.1 CDS PRU_1740 NC_014033.1 2097225 2099366 D identified by match to protein family HMM PF00176; match to protein family HMM PF00271; SNF2 helicase family protein 2097225..2099366 Prevotella ruminicola 23 9000330 YP_003575034.1 CDS PRU_1741 NC_014033.1 2099718 2102258 R identified by similarity to GB:CAG74921.1; hypothetical protein complement(2099718..2102258) Prevotella ruminicola 23 9001164 YP_003575035.1 CDS PRU_1742 NC_014033.1 2102637 2104958 D identified by similarity to GB:AAQ66490.1; hypothetical protein 2102637..2104958 Prevotella ruminicola 23 9000527 YP_003575036.1 CDS PRU_1744 NC_014033.1 2106700 2106963 D identified by similarity to SP:P55923; ATP-binding protein 2106700..2106963 Prevotella ruminicola 23 9002726 YP_003575037.1 CDS PRU_1745 NC_014033.1 2107067 2110213 R identified by glimmer; hypothetical protein complement(2107067..2110213) Prevotella ruminicola 23 9000721 YP_003575038.1 CDS PRU_1746 NC_014033.1 2110215 2110610 R identified by similarity to GB:CAE16717.1; hypothetical protein complement(2110215..2110610) Prevotella ruminicola 23 9001588 YP_003575039.1 CDS PRU_1747 NC_014033.1 2110631 2111896 R identified by similarity to GB:AAO05004.1; protease-like protein complement(2110631..2111896) Prevotella ruminicola 23 9000158 YP_003575040.1 CDS PRU_1748 NC_014033.1 2111897 2112892 R identified by similarity to GB:AAL82721.1; hypothetical protein complement(2111897..2112892) Prevotella ruminicola 23 9000915 YP_003575041.1 CDS PRU_1749 NC_014033.1 2113108 2113839 R identified by similarity to SP:P55923; match to protein family HMM PF01695; ISPru1 transposase orfB complement(2113108..2113839) Prevotella ruminicola 23 9001394 YP_003575042.1 CDS PRU_1750 NC_014033.1 2113856 2115409 R identified by similarity to SP:Q51761; match to protein family HMM PF00665; ISPru1 transposase orfA complement(2113856..2115409) Prevotella ruminicola 23 9002209 YP_003575043.1 CDS PRU_1751 NC_014033.1 2116053 2116670 R identified by similarity to GB:AAL94760.1; hypothetical protein complement(2116053..2116670) Prevotella ruminicola 23 9002445 YP_003575044.1 CDS PRU_1752 NC_014033.1 2117304 2118329 R identified by similarity to GB:AAT03383.1; hypothetical protein complement(2117304..2118329) Prevotella ruminicola 23 9000420 YP_003575045.1 CDS PRU_1753 NC_014033.1 2118322 2119005 R identified by glimmer; hypothetical protein complement(2118322..2119005) Prevotella ruminicola 23 9000220 YP_003575046.1 CDS PRU_1754 NC_014033.1 2118998 2119867 R identified by similarity to PIR:T19375; hypothetical protein complement(2118998..2119867) Prevotella ruminicola 23 9000986 YP_003575047.1 CDS PRU_1755 NC_014033.1 2120078 2121091 R identified by similarity to SP:Q8X7P7; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD dependent epimerase/dehydratase family protein complement(2120078..2121091) Prevotella ruminicola 23 9002375 YP_003575048.1 CDS PRU_1756 NC_014033.1 2121088 2122203 R identified by similarity to GB:CAA43914.1; match to protein family HMM PF00534; group 1 family glycosyltransferase complement(2121088..2122203) Prevotella ruminicola 23 9000982 YP_003575049.1 CDS PRU_1757 NC_014033.1 2122211 2123284 R identified by match to protein family HMM PF00534; group 1 family glycosyltransferase complement(2122211..2123284) Prevotella ruminicola 23 9002686 YP_003575050.1 CDS PRU_1758 NC_014033.1 2123377 2124300 R identified by match to protein family HMM PF00535; overlaps another CDS with the same product name; group 2 family glycosyltransferase complement(2123377..2124300) Prevotella ruminicola 23 9002200 YP_003575051.1 CDS PRU_1759 NC_014033.1 2124288 2125139 R identified by match to protein family HMM PF00535; overlaps another CDS with the same product name; group 2 family glycosyltransferase complement(2124288..2125139) Prevotella ruminicola 23 9001147 YP_003575052.1 CDS PRU_1760 NC_014033.1 2125165 2126166 R identified by glimmer; hypothetical protein complement(2125165..2126166) Prevotella ruminicola 23 9001905 YP_003575053.1 CDS PRU_1761 NC_014033.1 2126205 2127359 R identified by glimmer; hypothetical protein complement(2126205..2127359) Prevotella ruminicola 23 9000613 YP_003575054.1 CDS PRU_1762 NC_014033.1 2127503 2128696 R identified by match to protein family HMM PF00534; group 1 family glycosyltransferase complement(2127503..2128696) Prevotella ruminicola 23 9002474 YP_003575055.1 CDS PRU_1763 NC_014033.1 2128700 2129788 R acyltransferase family protein complement(2128700..2129788) Prevotella ruminicola 23 9000684 YP_003575056.1 CDS PRU_1764 NC_014033.1 2129795 2130808 R identified by match to protein family HMM PF00534; group 1 family glycosyltransferase complement(2129795..2130808) Prevotella ruminicola 23 9000093 YP_003575057.1 CDS PRU_1765 NC_014033.1 2131012 2132568 R identified by similarity to GB:AAO75147.1; match to protein family HMM PF01943; hypothetical protein complement(2131012..2132568) Prevotella ruminicola 23 9002307 YP_003575058.1 CDS PRU_1766 NC_014033.1 2132570 2133850 R identified by similarity to GB:AAO77985.1; match to protein family HMM PF04464; hypothetical protein complement(2132570..2133850) Prevotella ruminicola 23 9002140 YP_003575059.1 CDS PRU_1767 NC_014033.1 2133859 2135169 R identified by match to protein family HMM PF01467; match to protein family HMM PF03009; match to protein family HMM TIGR00125; glycerophosphoryl diester phosphodiesterase/cytidylyltransferase family protein complement(2133859..2135169) Prevotella ruminicola 23 9001309 YP_003575060.1 CDS PRU_1768 NC_014033.1 2135582 2136244 R identified by glimmer; hypothetical protein complement(2135582..2136244) Prevotella ruminicola 23 9002501 YP_003575061.1 CDS PRU_1769 NC_014033.1 2136333 2137646 R identified by similarity to SP:O32271; match to protein family HMM PF00070; match to protein family HMM PF00984; match to protein family HMM PF01210; match to protein family HMM PF02737; match to protein family HMM PF03720; match to protein family HMM PF03721; match to protein family HMM TIGR03026; UDP-glucose 6-dehydrogenase complement(2136333..2137646) Prevotella ruminicola 23 9001004 YP_003575062.1 CDS PRU_1770 NC_014033.1 2137719 2138747 R identified by match to protein family HMM PF00483; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase complement(2137719..2138747) Prevotella ruminicola 23 9000469 YP_003575063.1 CDS PRU_1772 NC_014033.1 2139865 2141145 R identified by similarity to GB:AAL21632.1; hypothetical protein complement(2139865..2141145) Prevotella ruminicola 23 9000358 YP_003575064.1 CDS PRU_1773 NC_014033.1 2141573 2141845 D identified by similarity to GB:BAC88738.1; hypothetical protein 2141573..2141845 Prevotella ruminicola 23 9000882 YP_003575065.1 CDS PRU_1774 NC_014033.1 2141859 2143019 D identified by similarity to GB:AAO79651.1; hypothetical protein 2141859..2143019 Prevotella ruminicola 23 9002433 YP_003575066.1 CDS PRU_1775 NC_014033.1 2143125 2143847 D identified by similarity to GB:BAD51011.1; hypothetical protein 2143125..2143847 Prevotella ruminicola 23 9000286 YP_003575067.1 CDS PRU_1776 NC_014033.1 2143910 2144239 D identified by glimmer; hypothetical protein 2143910..2144239 Prevotella ruminicola 23 9001367 YP_003575068.1 CDS PRU_1777 NC_014033.1 2144352 2144873 D identified by similarity to GB:AAO76747.1; hypothetical protein 2144352..2144873 Prevotella ruminicola 23 9000744 YP_003575069.1 CDS PRU_1778 NC_014033.1 2145066 2145512 D identified by similarity to SP:P00806; match to protein family HMM PF01510; N-acetylmuramoyl-L-alanine amidase 2145066..2145512 Prevotella ruminicola 23 9000157 YP_003575070.1 CDS PRU_1779 NC_014033.1 2146535 2147335 R identified by match to protein family HMM PF02563; lipoprotein complement(2146535..2147335) Prevotella ruminicola 23 9002703 YP_003575071.1 CDS PRU_1780 NC_014033.1 2147373 2147807 R identified by similarity to GB:AAO75927.1; hypothetical protein complement(2147373..2147807) Prevotella ruminicola 23 9001016 YP_003575072.1 CDS PRU_1781 NC_014033.1 2147881 2150418 R identified by match to protein family HMM PF02706; match to protein family HMM TIGR01007; chain length determinant family protein complement(2147881..2150418) Prevotella ruminicola 23 9000630 YP_003575073.1 CDS PRU_1782 NC_014033.1 2150453 2151334 R identified by similarity to GB:AAO78253.1; hypothetical protein complement(2150453..2151334) Prevotella ruminicola 23 9000025 YP_003575074.1 CDS PRU_1783 NC_014033.1 2151381 2152256 R lipoprotein complement(2151381..2152256) Prevotella ruminicola 23 9002179 YP_003575075.1 CDS PRU_1784 NC_014033.1 2152596 2153561 D identified by similarity to GB:AAL72272.1; match to protein family HMM PF02357; hypothetical protein 2152596..2153561 Prevotella ruminicola 23 9001598 YP_003575076.1 CDS pgi NC_014033.1 2153611 2154960 D identified by similarity to SP:P80860; match to protein family HMM PF00342; glucose-6-phosphate isomerase 2153611..2154960 Prevotella ruminicola 23 9000940 YP_003575077.1 CDS PRU_1786 NC_014033.1 2155042 2155734 D identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; HAD-superfamily hydrolase 2155042..2155734 Prevotella ruminicola 23 9001527 YP_003575078.1 CDS PRU_1787 NC_014033.1 2156149 2156940 D identified by similarity to GB:AAM25657.1; match to protein family HMM PF07605; hypothetical protein 2156149..2156940 Prevotella ruminicola 23 9000332 YP_003575079.1 CDS PRU_1790 NC_014033.1 2157957 2158550 R identified by similarity to PIR:S75061; hypothetical protein complement(2157957..2158550) Prevotella ruminicola 23 9002511 YP_003575080.1 CDS PRU_1791 NC_014033.1 2158540 2159271 R identified by similarity to PIR:S75061; hypothetical protein complement(2158540..2159271) Prevotella ruminicola 23 9001203 YP_003575081.1 CDS PRU_1792 NC_014033.1 2159271 2159846 R identified by similarity to GB:AAO79779.1; hypothetical protein complement(2159271..2159846) Prevotella ruminicola 23 9000385 YP_003575082.1 CDS PRU_1793 NC_014033.1 2159922 2161706 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 2159922..2161706 Prevotella ruminicola 23 9002441 YP_003575083.1 CDS PRU_1794 NC_014033.1 2161712 2162584 R identified by similarity to GB:AAB07555.1; match to protein family HMM PF00140; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02937; RNA polymerase sigma-70 factor complement(2161712..2162584) Prevotella ruminicola 23 9000983 YP_003575084.1 CDS PRU_1795 NC_014033.1 2162705 2165728 R identified by match to protein family HMM PF01055; family 31 glycosyl hydrolase complement(2162705..2165728) Prevotella ruminicola 23 9001408 YP_003575085.1 CDS PRU_1796 NC_014033.1 2165784 2168882 R identified by match to protein family HMM PF02518; match to protein family HMM PF07494; match to protein family HMM PF07495; sensor histidine kinase/response regulator complement(2165784..2168882) Prevotella ruminicola 23 9000149 YP_003575086.1 CDS PRU_1797 NC_014033.1 2168905 2169924 R identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator complement(2168905..2169924) Prevotella ruminicola 23 9002183 YP_003575087.1 CDS PRU_1798 NC_014033.1 2170163 2172811 R identified by similarity to GB:AAQ65949.1; hypothetical protein complement(2170163..2172811) Prevotella ruminicola 23 9002423 YP_003575088.1 CDS PRU_1799 NC_014033.1 2172795 2173502 R identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549; HAD-superfamily hydrolase complement(2172795..2173502) Prevotella ruminicola 23 9001788 YP_003575089.1 CDS PRU_1800 NC_014033.1 2173542 2174441 R identified by similarity to GB:AAQ67031.1; hypothetical protein complement(2173542..2174441) Prevotella ruminicola 23 9000483 YP_003575090.1 CDS PRU_1801 NC_014033.1 2174465 2175079 R identified by glimmer; hypothetical protein complement(2174465..2175079) Prevotella ruminicola 23 9002541 YP_003575091.1 CDS PRU_1802 NC_014033.1 2175275 2175991 R identified by similarity to GB:AAA27631.1; nucleotidyl transferase family protein complement(2175275..2175991) Prevotella ruminicola 23 9001379 YP_003575092.1 CDS PRU_1803 NC_014033.1 2176113 2176889 R identified by similarity to GB:AAQ65620.1; lipoprotein complement(2176113..2176889) Prevotella ruminicola 23 9001127 YP_003575093.1 CDS PRU_1804 NC_014033.1 2176987 2178141 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF08447; sensor histidine kinase complement(2176987..2178141) Prevotella ruminicola 23 9002305 YP_003575094.1 CDS PRU_1805 NC_014033.1 2178401 2179900 D identified by match to protein family HMM PF01170; match to protein family HMM PF02926; THUMP domain-containing protein 2178401..2179900 Prevotella ruminicola 23 9000443 YP_003575095.1 CDS PRU_1806 NC_014033.1 2179923 2182043 D identified by similarity to GB:BAA11872.1; match to protein family HMM PF00326; match to protein family HMM PF00930; S9 family peptidase 2179923..2182043 Prevotella ruminicola 23 9002161 YP_003575096.1 CDS purD NC_014033.1 2182080 2183366 D identified by similarity to SP:P15640; match to protein family HMM PF01071; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR00877; phosphoribosylamine--glycine ligase 2182080..2183366 Prevotella ruminicola 23 9000712 YP_003575097.1 CDS PRU_1808 NC_014033.1 2183387 2184328 D identified by similarity to GB:AAO78358.1; hypothetical protein 2183387..2184328 Prevotella ruminicola 23 9000130 YP_003575098.1 CDS PRU_1809 NC_014033.1 2184304 2184756 D identified by similarity to GB:AAO78357.1; match to protein family HMM PF09335; hypothetical protein 2184304..2184756 Prevotella ruminicola 23 9001811 YP_003575099.1 CDS PRU_1810 NC_014033.1 2184855 2188220 D identified by similarity to GB:AAQ67097.1; hypothetical protein 2184855..2188220 Prevotella ruminicola 23 9001202 YP_003575100.1 CDS PRU_1811 NC_014033.1 2188224 2188835 D identified by similarity to GB:CAB96552.1; match to protein family HMM PF01522; polysaccharide deacetylase family protein 2188224..2188835 Prevotella ruminicola 23 9000260 YP_003575101.1 CDS PRU_1812 NC_014033.1 2188919 2191222 D identified by similarity to GB:AAA86753.2; match to protein family HMM PF00933; match to protein family HMM PF01915; glucan 1,4-beta-glucosidase 2188919..2191222 Prevotella ruminicola 23 9001521 YP_003575102.1 CDS PRU_1814 NC_014033.1 2193422 2194618 D identified by match to protein family HMM PF00037; match to protein family HMM PF01180; match to protein family HMM TIGR01037; dihydroorotate oxidase 2193422..2194618 Prevotella ruminicola 23 9000524 YP_003575103.1 CDS PRU_1815 NC_014033.1 2194555 2195325 D identified by glimmer; hypothetical protein 2194555..2195325 Prevotella ruminicola 23 9001335 YP_003575104.1 CDS PRU_1816 NC_014033.1 2195328 2196305 D identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein 2195328..2196305 Prevotella ruminicola 23 9002102 YP_003575105.1 CDS PRU_1817 NC_014033.1 2196622 2197419 D identified by similarity to SP:Q06241; match to protein family HMM PF01427; D-alanyl-D-alanine dipeptidase 2196622..2197419 Prevotella ruminicola 23 9000026 YP_003575106.1 CDS PRU_1818 NC_014033.1 2197749 2198246 R identified by match to protein family HMM PF01037; AsnC family transcriptional regulator complement(2197749..2198246) Prevotella ruminicola 23 9001594 YP_003575107.1 CDS PRU_1819 NC_014033.1 2198255 2198707 R identified by similarity to GB:AAQ65940.1; hypothetical protein complement(2198255..2198707) Prevotella ruminicola 23 9002333 YP_003575108.1 CDS PRU_1820 NC_014033.1 2198704 2199228 R identified by similarity to SP:Q9ZHV9; match to protein family HMM PF02472; ExbD/TolR family biopolymer transport protein complement(2198704..2199228) Prevotella ruminicola 23 8999985 YP_003575109.1 CDS PRU_1821 NC_014033.1 2199189 2199500 R hypothetical protein complement(2199189..2199500) Prevotella ruminicola 23 9000752 YP_003575110.1 CDS PRU_1822 NC_014033.1 2199569 2200411 R identified by match to protein family HMM PF01618; MotA/TolQ/ExbB proton channel family protein complement(2199569..2200411) Prevotella ruminicola 23 9001961 YP_003575111.1 CDS PRU_1824 NC_014033.1 2200522 2201301 R identified by match to protein family HMM PF01026; match to protein family HMM TIGR00010; NUDIX family hydrolase complement(2200522..2201301) Prevotella ruminicola 23 9002770 YP_003575112.1 CDS idsA NC_014033.1 2201301 2202275 R identified by similarity to SP:Q53479; match to protein family HMM PF00348; short chain isoprenyl diphosphate synthase complement(2201301..2202275) Prevotella ruminicola 23 9002669 YP_003575113.1 CDS PRU_1826 NC_014033.1 2202281 2202883 R identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352; TonB family protein complement(2202281..2202883) Prevotella ruminicola 23 9000472 YP_003575114.1 CDS PRU_1827 NC_014033.1 2203076 2204026 D identified by similarity to GB:AAQ65786.1; hypothetical protein 2203076..2204026 Prevotella ruminicola 23 9001118 YP_003575115.1 CDS cmk NC_014033.1 2204023 2204712 D identified by similarity to SP:P38493; match to protein family HMM PF02224; match to protein family HMM TIGR00017; cytidylate kinase 2204023..2204712 Prevotella ruminicola 23 9001865 YP_003575116.1 CDS PRU_1829 NC_014033.1 2204916 2206196 D identified by similarity to GB:AAO76681.1; hypothetical protein 2204916..2206196 Prevotella ruminicola 23 9001034 YP_003575117.1 CDS folK NC_014033.1 2206206 2206628 R identified by similarity to SP:P29252; match to protein family HMM PF01288; match to protein family HMM TIGR01498; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase complement(2206206..2206628) Prevotella ruminicola 23 9000918 YP_003575118.1 CDS queA NC_014033.1 2206646 2207710 R identified by similarity to SP:O32054; match to protein family HMM PF02547; match to protein family HMM TIGR00113; S-adenosylmethionine:tRNA ribosyltransferase-isomerase complement(2206646..2207710) Prevotella ruminicola 23 9001541 YP_003575119.1 CDS truB NC_014033.1 2207728 2208432 R identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431; tRNA pseudouridine synthase B complement(2207728..2208432) Prevotella ruminicola 23 9000090 YP_003575120.1 CDS PRU_1833 NC_014033.1 2208429 2209232 R identified by match to protein family HMM PF02673; undecaprenol kinase complement(2208429..2209232) Prevotella ruminicola 23 9002227 YP_003575121.1 CDS PRU_1834 NC_014033.1 2209273 2209497 R identified by similarity to GB:AAO78317.1; hypothetical protein complement(2209273..2209497) Prevotella ruminicola 23 9001227 YP_003575122.1 CDS ftsX NC_014033.1 2209532 2210365 R identified by similarity to GB:AAD50460.1; match to protein family HMM PF02687; cell division protein FtsX complement(2209532..2210365) Prevotella ruminicola 23 9000588 YP_003575123.1 CDS PRU_1836 NC_014033.1 2210500 2211276 D identified by match to protein family HMM PF04055; radical SAM domain-containing protein 2210500..2211276 Prevotella ruminicola 23 9001469 YP_003575124.1 CDS PRU_1837 NC_014033.1 2212107 2215229 R identified by match to protein family HMM TIGR01643; match to protein family HMM TIGR03696; RHS/YD repeat protein complement(2212107..2215229) Prevotella ruminicola 23 9002086 YP_003575125.1 CDS PRU_1838 NC_014033.1 2215720 2217042 R identified by similarity to GB:AAO77100.1; match to protein family HMM TIGR03696; hypothetical protein complement(2215720..2217042) Prevotella ruminicola 23 9001487 YP_003575126.1 CDS PRU_1839 NC_014033.1 2217390 2217707 R identified by match to protein family HMM PF01909; nucleotidyltransferase domain-containing protein complement(2217390..2217707) Prevotella ruminicola 23 9000434 YP_003575127.1 CDS PRU_1841 NC_014033.1 2218445 2219530 D identified by similarity to GB:AAF74728.1; hypothetical protein 2218445..2219530 Prevotella ruminicola 23 9000250 YP_003575128.1 CDS PRU_1842 NC_014033.1 2219698 2220321 D identified by similarity to GB:AAO75336.1; hypothetical protein 2219698..2220321 Prevotella ruminicola 23 9001676 YP_003575129.1 CDS PRU_1843 NC_014033.1 2220393 2220722 D identified by glimmer; hypothetical protein 2220393..2220722 Prevotella ruminicola 23 9000662 YP_003575130.1 CDS PRU_1844 NC_014033.1 2220842 2221381 D identified by similarity to GB:AAO76747.1; hypothetical protein 2220842..2221381 Prevotella ruminicola 23 9000061 YP_003575131.1 CDS PRU_1845 NC_014033.1 2221500 2221937 D identified by similarity to SP:P00806; match to protein family HMM PF01510; N-acetylmuramoyl-L-alanine amidase 2221500..2221937 Prevotella ruminicola 23 9001026 YP_003575132.1 CDS PRU_1846 NC_014033.1 2221987 2222772 R identified by match to protein family HMM PF00132; acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase complement(2221987..2222772) Prevotella ruminicola 23 9000537 YP_003575133.1 CDS PRU_1847 NC_014033.1 2222855 2224234 R identified by match to protein family HMM PF02321; match to protein family HMM TIGR01845; NodT family RND efflux system, outer membrane lipoprotein complement(2222855..2224234) Prevotella ruminicola 23 9002285 YP_003575134.1 CDS acrA NC_014033.1 2227526 2228716 R identified by similarity to SP:P31223; match to protein family HMM PF00529; match to protein family HMM TIGR01730; acriflavine resistance protein A complement(2227526..2228716) Prevotella ruminicola 23 9002732 YP_003575135.1 CDS PRU_1850 NC_014033.1 2228879 2229439 R identified by glimmer; hypothetical protein complement(2228879..2229439) Prevotella ruminicola 23 9002248 YP_003575136.1 CDS PRU_1851 NC_014033.1 2229390 2230463 R identified by similarity to GB:AAO78724.1; hypothetical protein complement(2229390..2230463) Prevotella ruminicola 23 9001646 YP_003575137.1 CDS PRU_1852 NC_014033.1 2230453 2232717 R identified by match to protein family HMM PF05089; alpha-N-acetylglucosaminidase complement(2230453..2232717) Prevotella ruminicola 23 9001007 YP_003575138.1 CDS PRU_1853 NC_014033.1 2232719 2234158 R identified by match to protein family HMM PF01743; match to protein family HMM PF01966; match to protein family HMM TIGR00277; polyA polymerase family protein complement(2232719..2234158) Prevotella ruminicola 23 9000384 YP_003575139.1 CDS PRU_1854 NC_014033.1 2234222 2234500 R identified by similarity to PRF:1101273H; hypothetical protein complement(2234222..2234500) Prevotella ruminicola 23 9002604 YP_003575140.1 CDS PRU_1855 NC_014033.1 2234592 2236031 D identified by similarity to GB:BAA74514.1; match to protein family HMM PF01235; match to protein family HMM TIGR00835; alanine or glycine:cation symporter (AGCS) family transporter 2234592..2236031 Prevotella ruminicola 23 9000439 YP_003575141.1 CDS PRU_1856 NC_014033.1 2236063 2237232 D identified by match to protein family HMM PF00150; family 5 glycosyl hydrolase 2236063..2237232 Prevotella ruminicola 23 9002618 YP_003575142.1 CDS PRU_1857 NC_014033.1 2237229 2237582 D lipoprotein 2237229..2237582 Prevotella ruminicola 23 9002041 YP_003575143.1 CDS PRU_1858 NC_014033.1 2237672 2238238 D identified by similarity to GB:AAO79032.1; match to protein family HMM PF07659; hypothetical protein 2237672..2238238 Prevotella ruminicola 23 9002096 YP_003575144.1 CDS PRU_1859 NC_014033.1 2238235 2239395 D identified by similarity to GB:AAQ65806.1; match to protein family HMM PF07681; hypothetical protein 2238235..2239395 Prevotella ruminicola 23 9000656 YP_003575145.1 CDS tpiA NC_014033.1 2239446 2240207 D identified by similarity to SP:P27876; match to protein family HMM PF00121; match to protein family HMM TIGR00419; triose-phosphate isomerase 2239446..2240207 Prevotella ruminicola 23 9000556 YP_003575146.1 CDS PRU_1861 NC_014033.1 2240234 2240842 D identified by similarity to GB:AAO79035.1; match to protein family HMM PF05036; hypothetical protein 2240234..2240842 Prevotella ruminicola 23 9002500 YP_003575147.1 CDS folE NC_014033.1 2240842 2241447 D identified by match to protein family HMM PF01227; match to protein family HMM TIGR00063; GTP cyclohydrolase I 2240842..2241447 Prevotella ruminicola 23 9001612 YP_003575148.1 CDS PRU_1863 NC_014033.1 2241460 2242050 D identified by glimmer; hypothetical protein 2241460..2242050 Prevotella ruminicola 23 9000811 YP_003575149.1 CDS PRU_1864 NC_014033.1 2242087 2243736 D identified by match to protein family HMM PF04616; family 43 glycosyl hydrolase 2242087..2243736 Prevotella ruminicola 23 9000054 YP_003575150.1 CDS PRU_1865 NC_014033.1 2243742 2246078 D identified by similarity to SP:Q9P999; match to protein family HMM PF01055; alpha-xylosidase 2243742..2246078 Prevotella ruminicola 23 9002612 YP_003575151.1 CDS PRU_1867 NC_014033.1 2246404 2247504 R identified by similarity to GB:AAO77383.1; match to protein family HMM PF01594; hypothetical protein complement(2246404..2247504) Prevotella ruminicola 23 9002776 YP_003575152.1 CDS tdk NC_014033.1 2247479 2248081 R identified by match to protein family HMM PF00265; thymidine kinase complement(2247479..2248081) Prevotella ruminicola 23 9001142 YP_003575153.1 CDS PRU_1869 NC_014033.1 2248178 2248876 D identified by similarity to GB:AAQ65469.1; match to protein family HMM PF00590; match to protein family HMM TIGR00096; hypothetical protein 2248178..2248876 Prevotella ruminicola 23 9000856 YP_003575154.1 CDS PRU_1870 NC_014033.1 2248879 2249745 D identified by similarity to GB:AAO77379.1; lipoprotein 2248879..2249745 Prevotella ruminicola 23 9002485 YP_003575155.1 CDS PRU_1871 NC_014033.1 2249738 2250523 R identified by glimmer; hypothetical protein complement(2249738..2250523) Prevotella ruminicola 23 9001352 YP_003575156.1 CDS PRU_1872 NC_014033.1 2250766 2253753 R identified by similarity to GB:CAG23832.1; hypothetical protein complement(2250766..2253753) Prevotella ruminicola 23 9001838 YP_003575157.1 CDS PRU_1873 NC_014033.1 2253782 2254687 R identified by similarity to GB:BAB53822.1; hypothetical protein complement(2253782..2254687) Prevotella ruminicola 23 9001387 YP_003575158.1 CDS PRU_1874 NC_014033.1 2255146 2258403 D identified by similarity to GB:CAA10226.1; match to protein family HMM PF00593; match to protein family HMM PF07715; receptor antigen RagA 2255146..2258403 Prevotella ruminicola 23 9002145 YP_003575159.1 CDS PRU_1875 NC_014033.1 2258424 2260109 D lipoprotein 2258424..2260109 Prevotella ruminicola 23 9002465 YP_003575160.1 CDS PRU_1876 NC_014033.1 2260133 2260963 D lipoprotein 2260133..2260963 Prevotella ruminicola 23 9000238 YP_003575161.1 CDS PRU_1877 NC_014033.1 2261209 2262420 D identified by similarity to GB:AAO77512.1; hypothetical protein 2261209..2262420 Prevotella ruminicola 23 9001248 YP_003575162.1 CDS PRU_1878 NC_014033.1 2262704 2263252 R DNA-binding protein complement(2262704..2263252) Prevotella ruminicola 23 9001853 YP_003575163.1 CDS PRU_1879 NC_014033.1 2263797 2264147 D identified by match to protein family HMM PF01909; nucleotidyltransferase domain-containing protein 2263797..2264147 Prevotella ruminicola 23 9000470 YP_003575164.1 CDS PRU_1880 NC_014033.1 2264134 2264541 D identified by similarity to PIR:B72307; match to protein family HMM PF05168; hypothetical protein 2264134..2264541 Prevotella ruminicola 23 9001085 YP_003575165.1 CDS PRU_1881 NC_014033.1 2264667 2265479 D identified by similarity to SP:P22493; match to protein family HMM PF00717; S24 family peptidase 2264667..2265479 Prevotella ruminicola 23 8999999 YP_003575166.1 CDS PRU_1882 NC_014033.1 2265827 2266591 D identified by match to protein family HMM PF09669; antirepressor 2265827..2266591 Prevotella ruminicola 23 9002670 YP_003575167.1 CDS PRU_1883 NC_014033.1 2266715 2267179 D identified by match to protein family HMM PF00959; lysozyme 2266715..2267179 Prevotella ruminicola 23 9000639 YP_003575168.1 CDS PRU_1884 NC_014033.1 2267256 2269475 D identified by glimmer; hypothetical protein 2267256..2269475 Prevotella ruminicola 23 9002095 YP_003575169.1 CDS PRU_1885 NC_014033.1 2269589 2269957 D identified by glimmer; hypothetical protein 2269589..2269957 Prevotella ruminicola 23 9001806 YP_003575170.1 CDS PRU_1886 NC_014033.1 2270277 2273273 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein 2270277..2273273 Prevotella ruminicola 23 9001274 YP_003575171.1 CDS PRU_1887 NC_014033.1 2273293 2274768 D identified by match to protein family HMM PF07980; lipoprotein 2273293..2274768 Prevotella ruminicola 23 9002345 YP_003575172.1 CDS PRU_1888 NC_014033.1 2275121 2278312 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB dependent receptor 2275121..2278312 Prevotella ruminicola 23 9001370 YP_003575173.1 CDS PRU_1889 NC_014033.1 2278373 2279989 D hypothetical protein 2278373..2279989 Prevotella ruminicola 23 9000937 YP_003575174.1 CDS PRU_1890 NC_014033.1 2280097 2280549 R identified by match to protein family HMM PF00383; cytidine/deoxycytidylate deaminase zinc-binding domain-containing protein complement(2280097..2280549) Prevotella ruminicola 23 9002524 YP_003575175.1 CDS PRU_1891 NC_014033.1 2280532 2281305 D identified by match to protein family HMM PF03099; match to protein family HMM TIGR00121; biotin--acetyl-CoA-carboxylase ligase 2280532..2281305 Prevotella ruminicola 23 9001029 YP_003575176.1 CDS pyrH NC_014033.1 2281367 2282077 D identified by similarity to SP:P29464; match to protein family HMM PF00696; match to protein family HMM TIGR02075; UMP kinase 2281367..2282077 Prevotella ruminicola 23 9002022 YP_003575177.1 CDS PRU_1893 NC_014033.1 2282082 2282465 R identified by glimmer; hypothetical protein complement(2282082..2282465) Prevotella ruminicola 23 9002614 YP_003575178.1 CDS PRU_1894 NC_014033.1 2282469 2283155 R identified by similarity to SP:P39823; match to protein family HMM PF01066; match to protein family HMM TIGR00473; CDP-diacylglycerol--serine O-phosphatidyltransferase complement(2282469..2283155) Prevotella ruminicola 23 9002193 YP_003575179.1 CDS psd NC_014033.1 2283189 2283878 R identified by match to protein family HMM PF02666; match to protein family HMM TIGR00164; phosphatidylserine decarboxylase complement(2283189..2283878) Prevotella ruminicola 23 9001460 YP_003575180.1 CDS dnaE NC_014033.1 2284022 2287753 D identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594; DNA polymerase III subunit alpha 2284022..2287753 Prevotella ruminicola 23 9002447 YP_003575181.1 CDS trx NC_014033.1 2287818 2288132 D identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin 2287818..2288132 Prevotella ruminicola 23 9001966 YP_003575182.1 CDS PRU_1898 NC_014033.1 2288162 2288575 R identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150; YjeE family ATPase complement(2288162..2288575) Prevotella ruminicola 23 9002321 YP_003575183.1 CDS PRU_1899 NC_014033.1 2288622 2290181 R identified by match to protein family HMM PF00072; match to protein family HMM PF08665; response regulator complement(2288622..2290181) Prevotella ruminicola 23 9000139 YP_003575184.1 CDS PRU_1900 NC_014033.1 2290199 2293018 R identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein complement(2290199..2293018) Prevotella ruminicola 23 9001252 YP_003575185.1 CDS PRU_1901 NC_014033.1 2293066 2293260 R identified by glimmer; hypothetical protein complement(2293066..2293260) Prevotella ruminicola 23 9002489 YP_003575186.1 CDS aroA NC_014033.1 2293285 2294535 R identified by match to protein family HMM PF00275; 3-phosphoshikimate 1-carboxyvinyltransferase complement(2293285..2294535) Prevotella ruminicola 23 9001686 YP_003575187.1 CDS pelA NC_014033.1 2294704 2295786 D identified by similarity to GB:BAA81752.1; match to protein family HMM PF09492; match to protein family HMM TIGR02474; pectate lyase 2294704..2295786 Prevotella ruminicola 23 9001575 YP_003575188.1 CDS PRU_1906 NC_014033.1 2296796 2297290 R identified by glimmer; hypothetical protein complement(2296796..2297290) Prevotella ruminicola 23 9002779 YP_003575189.1 CDS PRU_1907 NC_014033.1 2297470 2298579 R lipoprotein complement(2297470..2298579) Prevotella ruminicola 23 9001185 YP_003575190.1 CDS PRU_1908 NC_014033.1 2298623 2299885 R identified by similarity to GB:AAQ65540.1; hypothetical protein complement(2298623..2299885) Prevotella ruminicola 23 9002557 YP_003575191.1 CDS PRU_1909 NC_014033.1 2299901 2301442 R identified by match to protein family HMM PF02837; glycosyl hydrolase complement(2299901..2301442) Prevotella ruminicola 23 9001388 YP_003575192.1 CDS PRU_1911 NC_014033.1 2301748 2302152 D identified by similarity to GB:BAD47341.1; hypothetical protein 2301748..2302152 Prevotella ruminicola 23 9002810 YP_003575193.1 CDS PRU_1912 NC_014033.1 2302240 2304228 D identified by similarity to GB:AAO77524.1; match to protein family HMM PF03739; hypothetical protein 2302240..2304228 Prevotella ruminicola 23 9000169 YP_003575194.1 CDS ribBA NC_014033.1 2304268 2305470 D identified by similarity to SP:P17620; match to protein family HMM PF00925; match to protein family HMM PF00926; match to protein family HMM TIGR00505; match to protein family HMM TIGR00506; 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II 2304268..2305470 Prevotella ruminicola 23 9002149 YP_003575195.1 CDS aatA NC_014033.1 2305573 2306766 D identified by similarity to SP:Q02635; match to protein family HMM PF00155; aspartate aminotransferase 2305573..2306766 Prevotella ruminicola 23 9001531 YP_003575196.1 CDS PRU_1915 NC_014033.1 2306884 2307714 D identified by match to protein family HMM PF01618; MotA/TolQ/ExbB proton channel family protein 2306884..2307714 Prevotella ruminicola 23 9000413 YP_003575197.1 CDS PRU_1916 NC_014033.1 2307757 2308374 D identified by similarity to GB:AAO77774.1; hypothetical protein 2307757..2308374 Prevotella ruminicola 23 9002437 YP_003575198.1 CDS PRU_1917 NC_014033.1 2308382 2309047 D identified by similarity to GB:AAO77773.1; hypothetical protein 2308382..2309047 Prevotella ruminicola 23 9002028 YP_003575199.1 CDS PRU_1918 NC_014033.1 2309070 2309903 D identified by match to protein family HMM PF03544; match to protein family HMM TIGR01352; TonB family protein 2309070..2309903 Prevotella ruminicola 23 9001290 YP_003575200.1 CDS PRU_1919 NC_014033.1 2309924 2310883 D ABC transporter periplasmic substrate-binding protein 2309924..2310883 Prevotella ruminicola 23 9002443 YP_003575201.1 CDS PRU_1920 NC_014033.1 2310959 2312383 D hypothetical protein 2310959..2312383 Prevotella ruminicola 23 9001515 YP_003575202.1 CDS PRU_1921 NC_014033.1 2312560 2312727 R identified by match to protein family HMM PF00037; ferredoxin complement(2312560..2312727) Prevotella ruminicola 23 9000869 YP_003575203.1 CDS PRU_1922 NC_014033.1 2312899 2313606 D identified by similarity to GB:BAA36600.1; PorT protein 2312899..2313606 Prevotella ruminicola 23 9002170 YP_003575204.1 CDS PRU_1923 NC_014033.1 2313609 2314451 R identified by similarity to GB:AAM97494.1; match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein complement(2313609..2314451) Prevotella ruminicola 23 9002402 YP_003575205.1 CDS PRU_1924 NC_014033.1 2314456 2315220 R identified by match to protein family HMM PF02872; 5'-nucleotidase domain-containing protein complement(2314456..2315220) Prevotella ruminicola 23 9000803 YP_003575206.1 CDS rplS NC_014033.1 2315395 2315754 D identified by similarity to SP:P30529; match to protein family HMM PF01245; match to protein family HMM TIGR01024; 50S ribosomal protein L19 2315395..2315754 Prevotella ruminicola 23 9001230 YP_003575207.1 CDS PRU_1927 NC_014033.1 2316029 2317213 D identified by similarity to SP:P12048; match to protein family HMM PF01808; phosphoribosylaminoimidazolecarboxamide formyltransferase 2316029..2317213 Prevotella ruminicola 23 9002234 YP_003575208.1 CDS PRU_1928 NC_014033.1 2317243 2317431 D identified by glimmer; hypothetical protein 2317243..2317431 Prevotella ruminicola 23 9001032 YP_003575209.1 CDS PRU_1929 NC_014033.1 2317453 2318706 D identified by similarity to SP:P48842; match to protein family HMM PF07745; family 53 glycosyl hydrolase 2317453..2318706 Prevotella ruminicola 23 9001991 YP_003575210.1 CDS PRU_1930 NC_014033.1 2318732 2320063 R identified by match to protein family HMM PF02321; outer membrane efflux protein complement(2318732..2320063) Prevotella ruminicola 23 9002752 YP_003575211.1 CDS PRU_1931 NC_014033.1 2320070 2321182 R identified by similarity to SP:P75830; match to protein family HMM PF00529; match to protein family HMM TIGR01730; RND family efflux transporter MFP subunit complement(2320070..2321182) Prevotella ruminicola 23 9002147 YP_003575212.1 CDS PRU_1932 NC_014033.1 2321227 2322471 R identified by match to protein family HMM PF02687; ABC transporter permease complement(2321227..2322471) Prevotella ruminicola 23 9000959 YP_003575213.1 CDS PRU_1933 NC_014033.1 2322503 2323759 R identified by match to protein family HMM PF02687; ABC transporter permease complement(2322503..2323759) Prevotella ruminicola 23 9001798 YP_003575214.1 CDS PRU_1934 NC_014033.1 2323842 2324561 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2323842..2324561) Prevotella ruminicola 23 9001315 YP_003575215.1 CDS PRU_1935 NC_014033.1 2324603 2324965 R identified by match to protein family HMM PF00392; GntR family transcriptional regulator complement(2324603..2324965) Prevotella ruminicola 23 9001615 YP_003575216.1 CDS PRU_1936 NC_014033.1 2324949 2325785 R hypothetical protein complement(2324949..2325785) Prevotella ruminicola 23 9002156 YP_003575217.1 CDS PRU_1937 NC_014033.1 2325791 2326591 R identified by similarity to GB:BAD50869.1; hypothetical protein complement(2325791..2326591) Prevotella ruminicola 23 9000660 YP_003575218.1 CDS PRU_1938 NC_014033.1 2326611 2327426 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2326611..2327426) Prevotella ruminicola 23 9001985 YP_003575219.1 CDS PRU_1939 NC_014033.1 2328043 2329407 D identified by similarity to GB:AAO79725.1; hypothetical protein 2328043..2329407 Prevotella ruminicola 23 9002278 YP_003575220.1 CDS PRU_1940 NC_014033.1 2329499 2332108 D identified by match to protein family HMM PF00933; match to protein family HMM PF01915; family 3 glycosyl hydrolase 2329499..2332108 Prevotella ruminicola 23 9000107 YP_003575221.1 CDS ppnK NC_014033.1 2332109 2332993 R identified by match to protein family HMM PF01513; ATP-NAD kinase complement(2332109..2332993) Prevotella ruminicola 23 9002425 YP_003575222.1 CDS PRU_1942 NC_014033.1 2333100 2333672 D identified by match to protein family HMM PF01965; match to protein family HMM TIGR01383; DJ-1/PfpI family protein 2333100..2333672 Prevotella ruminicola 23 9000571 YP_003575223.1 CDS ispD NC_014033.1 2333672 2334334 D identified by match to protein family HMM PF01128; match to protein family HMM TIGR00453; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2333672..2334334 Prevotella ruminicola 23 9001321 YP_003575224.1 CDS recG NC_014033.1 2334334 2336427 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF01336; match to protein family HMM TIGR00643; ATP-dependent DNA helicase RecG 2334334..2336427 Prevotella ruminicola 23 9001784 YP_003575225.1 CDS PRU_1945 NC_014033.1 2336517 2337065 D identified by match to protein family HMM PF00877; NLP/P60 family protein 2336517..2337065 Prevotella ruminicola 23 9002154 YP_003575226.1 CDS PRU_1946 NC_014033.1 2337226 2338161 D identified by match to protein family HMM PF01476; match to protein family HMM PF01551; M23 peptidase/LysM domain-containing protein 2337226..2338161 Prevotella ruminicola 23 9001195 YP_003575227.1 CDS PRU_1947 NC_014033.1 2338221 2339831 D identified by similarity to PIR:AE0021; match to protein family HMM PF05872; hypothetical protein 2338221..2339831 Prevotella ruminicola 23 9001243 YP_003575228.1 CDS PRU_1948 NC_014033.1 2339832 2340392 R identified by match to protein family HMM PF01648; 4'-phosphopantetheinyl transferase family protein complement(2339832..2340392) Prevotella ruminicola 23 9000397 YP_003575229.1 CDS PRU_1949 NC_014033.1 2340588 2341889 R identified by match to protein family HMM PF02646; RmuC domain-containing protein complement(2340588..2341889) Prevotella ruminicola 23 9000441 YP_003575230.1 CDS PRU_1950 NC_014033.1 2342544 2345735 D identified by similarity to GB:CAA10226.1; match to protein family HMM PF00593; match to protein family HMM PF07715; receptor antigen RagA 2342544..2345735 Prevotella ruminicola 23 9002469 YP_003575231.1 CDS PRU_1951 NC_014033.1 2345780 2347312 D identified by match to protein family HMM PF07980; lipoprotein 2345780..2347312 Prevotella ruminicola 23 9000725 YP_003575232.1 CDS PRU_1952 NC_014033.1 2347398 2349770 D identified by glimmer; hypothetical protein 2347398..2349770 Prevotella ruminicola 23 9002671 YP_003575233.1 CDS PRU_1953 NC_014033.1 2349806 2350891 D identified by match to protein family HMM PF00722; family 16 glycosyl hydrolase 2349806..2350891 Prevotella ruminicola 23 9001871 YP_003575234.1 CDS PRU_1954 NC_014033.1 2350892 2352268 D identified by similarity to GB:AAO78185.1; match to protein family HMM PF08757; hypothetical protein 2350892..2352268 Prevotella ruminicola 23 9000934 YP_003575235.1 CDS PRU_1956 NC_014033.1 2353524 2355794 D identified by match to protein family HMM PF00933; match to protein family HMM PF01915; family 3 glycosyl hydrolase 2353524..2355794 Prevotella ruminicola 23 9000522 YP_003575236.1 CDS glnA_2 NC_014033.1 2356057 2358270 R identified by similarity to GB:AAF91344.1; match to protein family HMM PF00120; type III glutamine synthetase complement(2356057..2358270) Prevotella ruminicola 23 9002338 YP_003575237.1 CDS dapF NC_014033.1 2358467 2359270 R identified by match to protein family HMM PF01678; match to protein family HMM TIGR00652; diaminopimelate epimerase complement(2358467..2359270) Prevotella ruminicola 23 9000900 YP_003575238.1 CDS gltD NC_014033.1 2359295 2360704 R identified by match to protein family HMM PF01266; match to protein family HMM PF07992; match to protein family HMM TIGR01317; glutamate synthase small subunit complement(2359295..2360704) Prevotella ruminicola 23 9000283 YP_003575239.1 CDS gltA_2 NC_014033.1 2360796 2365289 R identified by similarity to SP:P39812; match to protein family HMM PF00310; match to protein family HMM PF01493; match to protein family HMM PF01645; match to protein family HMM PF04898; glutamate synthase large subunit complement(2360796..2365289) Prevotella ruminicola 23 9001491 YP_003575240.1 CDS PRU_1961 NC_014033.1 2365445 2365837 R identified by glimmer; hypothetical protein complement(2365445..2365837) Prevotella ruminicola 23 9000232 YP_003575241.1 CDS PRU_1962 NC_014033.1 2365843 2368065 R identified by glimmer; hypothetical protein complement(2365843..2368065) Prevotella ruminicola 23 9002411 YP_003575242.1 CDS PRU_1963 NC_014033.1 2368315 2369013 R identified by match to protein family HMM PF02498; antirepressor complement(2368315..2369013) Prevotella ruminicola 23 9000590 YP_003575243.1 CDS PRU_1965 NC_014033.1 2370175 2370810 R identified by glimmer; hypothetical protein complement(2370175..2370810) Prevotella ruminicola 23 9000565 YP_003575244.1 CDS PRU_1967 NC_014033.1 2372043 2372366 D identified by similarity to GB:AAQ66006.1; match to protein family HMM TIGR03071; hypothetical protein 2372043..2372366 Prevotella ruminicola 23 9002082 YP_003575245.1 CDS PRU_1968 NC_014033.1 2372359 2373303 D identified by similarity to GB:AAQ66007.1; match to protein family HMM PF07804; match to protein family HMM PF07805; HipA domain-containing protein 2372359..2373303 Prevotella ruminicola 23 9002150 YP_003575246.1 CDS PRU_1969 NC_014033.1 2373536 2374945 R identified by match to protein family HMM PF02368; surface protein complement(2373536..2374945) Prevotella ruminicola 23 9000168 YP_003575247.1 CDS PRU_1970 NC_014033.1 2375583 2376134 D identified by match to protein family HMM TIGR01201; histone-like DNA-binding protein 2375583..2376134 Prevotella ruminicola 23 9000553 YP_003575248.1 CDS pyrG NC_014033.1 2376571 2378166 D identified by match to protein family HMM PF00117; match to protein family HMM PF06418; match to protein family HMM TIGR00337; CTP synthase 2376571..2378166 Prevotella ruminicola 23 9001340 YP_003575249.1 CDS PRU_1973 NC_014033.1 2378208 2379956 D identified by match to protein family HMM PF00310; glutamine amidotransferase 2378208..2379956 Prevotella ruminicola 23 9001756 YP_003575250.1 CDS PRU_1974 NC_014033.1 2379987 2381219 R identified by similarity to GB:AAR33497.1; match to protein family HMM PF00155; match to protein family HMM TIGR03542; aminotransferase-like protein complement(2379987..2381219) Prevotella ruminicola 23 9001064 YP_003575251.1 CDS PRU_1975 NC_014033.1 2381534 2381881 D identified by similarity to PDB:1QY7_A; match to protein family HMM PF00543; nitrogen regulatory protein P-II 2381534..2381881 Prevotella ruminicola 23 9000454 YP_003575252.1 CDS amt NC_014033.1 2381963 2383219 D identified by match to protein family HMM PF00909; match to protein family HMM TIGR00836; ammonium transporter 2381963..2383219 Prevotella ruminicola 23 9002265 YP_003575253.1 CDS PRU_1977 NC_014033.1 2383290 2384027 D identified by similarity to GB:AAO75653.1; hypothetical protein 2383290..2384027 Prevotella ruminicola 23 9001485 YP_003575254.1 CDS asnB NC_014033.1 2384086 2385750 D identified by similarity to SP:P22106; match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536; asparagine synthase 2384086..2385750 Prevotella ruminicola 23 9000327 YP_003575255.1 CDS PRU_1979 NC_014033.1 2385856 2386530 R identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein complement(2385856..2386530) Prevotella ruminicola 23 9001932 YP_003575256.1 CDS PRU_1980 NC_014033.1 2386570 2388990 R identified by match to protein family HMM PF02687; ABC transporter permease complement(2386570..2388990) Prevotella ruminicola 23 9001143 YP_003575257.1 CDS PRU_1981 NC_014033.1 2389057 2391408 R identified by match to protein family HMM PF02687; ABC transporter permease complement(2389057..2391408) Prevotella ruminicola 23 9002715 YP_003575258.1 CDS PRU_1982 NC_014033.1 2391427 2391969 R identified by similarity to GB:AAO77607.1; hypothetical protein complement(2391427..2391969) Prevotella ruminicola 23 9001982 YP_003575259.1 CDS PRU_1983 NC_014033.1 2392138 2392926 R identified by similarity to GB:BAD49120.1; match to protein family HMM PF02687; ABC transporter permease complement(2392138..2392926) Prevotella ruminicola 23 9000692 YP_003575260.1 CDS PRU_1985 NC_014033.1 2394505 2396883 R identified by match to protein family HMM PF02687; ABC transporter permease complement(2394505..2396883) Prevotella ruminicola 23 9002737 YP_003575261.1 CDS PRU_1986 NC_014033.1 2396890 2398143 R identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; RND family efflux transporter MFP subunit complement(2396890..2398143) Prevotella ruminicola 23 9001765 YP_003575262.1 CDS PRU_1987 NC_014033.1 2398131 2399510 R identified by match to protein family HMM PF02321; outer membrane efflux protein complement(2398131..2399510) Prevotella ruminicola 23 9001141 YP_003575263.1 CDS PRU_1988 NC_014033.1 2399679 2400254 D identified by match to protein family HMM PF00072; match to protein family HMM PF02954; DNA-binding response regulator 2399679..2400254 Prevotella ruminicola 23 9002228 YP_003575264.1 CDS PRU_1989 NC_014033.1 2400335 2401156 D identified by match to protein family HMM PF02518; sensor histidine kinase 2400335..2401156 Prevotella ruminicola 23 9001713 YP_003575265.1 CDS PRU_1990 NC_014033.1 2401126 2402511 R identified by similarity to GB:AAQ66376.1; helicase complement(2401126..2402511) Prevotella ruminicola 23 9000677 YP_003575266.1 CDS PRU_1991 NC_014033.1 2402615 2402722 D identified by glimmer; hypothetical protein 2402615..2402722 Prevotella ruminicola 23 9002676 YP_003575267.1 CDS PRU_1992 NC_014033.1 2402723 2403523 D identified by similarity to GB:AAO79085.1; hypothetical protein 2402723..2403523 Prevotella ruminicola 23 9000464 YP_003575268.1 CDS PRU_1993 NC_014033.1 2403520 2404071 D identified by similarity to GB:AAO82170.1; match to protein family HMM PF03602; methyltransferase 2403520..2404071 Prevotella ruminicola 23 9001592 YP_003575269.1 CDS PRU_1994 NC_014033.1 2404043 2405461 R identified by match to protein family HMM PF00614; phospholipase D complement(2404043..2405461) Prevotella ruminicola 23 9002360 YP_003575270.1 CDS dnaG NC_014033.1 2405458 2407389 R identified by match to protein family HMM PF01751; match to protein family HMM PF01807; match to protein family HMM PF08275; match to protein family HMM TIGR01391; DNA primase complement(2405458..2407389) Prevotella ruminicola 23 9000022 YP_003575271.1 CDS nadB NC_014033.1 2407391 2408977 R identified by similarity to SP:P10902; match to protein family HMM PF00890; match to protein family HMM PF07992; match to protein family HMM TIGR00551; L-aspartate oxidase complement(2407391..2408977) Prevotella ruminicola 23 9001908 YP_003575272.1 CDS PRU_1997 NC_014033.1 2409039 2410313 D identified by similarity to GB:AAO79747.1; hypothetical protein 2409039..2410313 Prevotella ruminicola 23 9000242 YP_003575273.1 CDS dacB NC_014033.1 2410331 2411560 D identified by match to protein family HMM PF02113; match to protein family HMM TIGR00666; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 2410331..2411560 Prevotella ruminicola 23 9002093 YP_003575274.1 CDS serB NC_014033.1 2411618 2412850 D identified by match to protein family HMM PF00702; match to protein family HMM PF01842; match to protein family HMM PF08282; match to protein family HMM TIGR00338; match to protein family HMM TIGR01488; phosphoserine phosphatase SerB 2411618..2412850 Prevotella ruminicola 23 9001698 YP_003575275.1 CDS mutY NC_014033.1 2412864 2413880 D identified by match to protein family HMM PF00730; match to protein family HMM TIGR01084; A/G-specific adenine glycosylase 2412864..2413880 Prevotella ruminicola 23 9000889 YP_003575276.1 CDS PRU_2001 NC_014033.1 2413852 2414331 R identified by match to protein family HMM PF09719; match to protein family HMM TIGR01909; redox protein complement(2413852..2414331) Prevotella ruminicola 23 9000457 YP_003575277.1 CDS PRU_2002 NC_014033.1 2414410 2414997 R identified by glimmer; hypothetical protein complement(2414410..2414997) Prevotella ruminicola 23 9002478 YP_003575278.1 CDS ftsZ_2 NC_014033.1 2414994 2416265 R identified by match to protein family HMM PF00091; match to protein family HMM PF03953; match to protein family HMM TIGR00065; cell division protein FtsZ complement(2414994..2416265) Prevotella ruminicola 23 9001901 YP_003575279.1 CDS PRU_2004 NC_014033.1 2416921 2418966 R identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein complement(2416921..2418966) Prevotella ruminicola 23 9001133 YP_003575280.1 CDS PRU_2005 NC_014033.1 2418995 2419834 R identified by match to protein family HMM PF01048; phosphorylase family protein complement(2418995..2419834) Prevotella ruminicola 23 9000352 YP_003575281.1 CDS PRU_2006 NC_014033.1 2420276 2420653 R identified by similarity to GB:BAB48374.1; hypothetical protein complement(2420276..2420653) Prevotella ruminicola 23 9002610 YP_003575282.1 CDS PRU_2007 NC_014033.1 2420665 2423574 R identified by similarity to GB:AAC28745.1; match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM PF08282; match to protein family HMM TIGR01494; match to protein family HMM TIGR01517; calcium-translocating P-type ATPase, PMCA-type complement(2420665..2423574) Prevotella ruminicola 23 9002136 YP_003575283.1 CDS PRU_2008 NC_014033.1 2424430 2425083 R identified by glimmer; hypothetical protein complement(2424430..2425083) Prevotella ruminicola 23 9002586 YP_003575284.1 CDS PRU_2009 NC_014033.1 2425170 2426198 R identified by similarity to PIR:AB2344; hypothetical protein complement(2425170..2426198) Prevotella ruminicola 23 9001224 YP_003575285.1 CDS PRU_2010 NC_014033.1 2426195 2426515 R identified by similarity to GB:CAG20861.1; match to protein family HMM PF05656; hypothetical protein complement(2426195..2426515) Prevotella ruminicola 23 9001776 YP_003575286.1 CDS PRU_2012 NC_014033.1 2427133 2428611 R identified by similarity to GB:AAR07659.1; hypothetical protein complement(2427133..2428611) Prevotella ruminicola 23 9001800 YP_003575287.1 CDS PRU_2013 NC_014033.1 2428615 2429994 R hypothetical protein complement(2428615..2429994) Prevotella ruminicola 23 9000818 YP_003575288.1 CDS PRU_2014 NC_014033.1 2429991 2431037 R identified by similarity to GB:AAC44737.1; match to protein family HMM PF00092; tellurium resistance protein complement(2429991..2431037) Prevotella ruminicola 23 9000550 YP_003575289.1 CDS PRU_2015 NC_014033.1 2431045 2431680 R identified by similarity to GB:AAC44737.1; match to protein family HMM PF00092; tellurium resistance protein complement(2431045..2431680) Prevotella ruminicola 23 9000964 YP_003575290.1 CDS PRU_2016 NC_014033.1 2432245 2432883 R identified by similarity to GB:AAC44737.1; match to protein family HMM PF00092; tellurium resistance protein complement(2432245..2432883) Prevotella ruminicola 23 9001371 YP_003575291.1 CDS PRU_2017 NC_014033.1 2432896 2433561 R identified by similarity to GB:CAB42999.1; match to protein family HMM PF02342; tellurium resistance protein complement(2432896..2433561) Prevotella ruminicola 23 9000221 YP_003575292.1 CDS PRU_2018 NC_014033.1 2433573 2434208 R identified by similarity to PIR:B97074; tellurium resistance protein complement(2433573..2434208) Prevotella ruminicola 23 9002636 YP_003575293.1 CDS terD NC_014033.1 2434211 2434768 R identified by match to protein family HMM PF02342; tellurium resistance protein TerD complement(2434211..2434768) Prevotella ruminicola 23 9000733 YP_003575294.1 CDS PRU_2020 NC_014033.1 2434892 2436289 R identified by glimmer; hypothetical protein complement(2434892..2436289) Prevotella ruminicola 23 9001873 YP_003575295.1 CDS PRU_2021 NC_014033.1 2436913 2437770 D identified by glimmer; hypothetical protein 2436913..2437770 Prevotella ruminicola 23 8999979 YP_003575296.1 CDS PRU_2022 NC_014033.1 2437864 2438178 R identified by match to protein family HMM PF01909; nucleotidyl transferase complement(2437864..2438178) Prevotella ruminicola 23 9000573 YP_003575297.1 CDS PRU_2023 NC_014033.1 2438246 2438620 R identified by similarity to GB:AAR97702.1; hypothetical protein complement(2438246..2438620) Prevotella ruminicola 23 9000895 YP_003575298.1 CDS PRU_2024 NC_014033.1 2438746 2438847 R lipoprotein complement(2438746..2438847) Prevotella ruminicola 23 9000148 YP_003575299.1 CDS PRU_2025 NC_014033.1 2438917 2439468 R identified by similarity to GB:AAO76747.1; hypothetical protein complement(2438917..2439468) Prevotella ruminicola 23 9001568 YP_003575300.1 CDS PRU_2026 NC_014033.1 2439903 2440811 D identified by glimmer; hypothetical protein 2439903..2440811 Prevotella ruminicola 23 9000036 YP_003575301.1 CDS PRU_2028 NC_014033.1 2441773 2442099 D identified by glimmer; hypothetical protein 2441773..2442099 Prevotella ruminicola 23 9000807 YP_003575302.1 CDS PRU_2029 NC_014033.1 2442107 2442376 D identified by glimmer; hypothetical protein 2442107..2442376 Prevotella ruminicola 23 9001211 YP_003575303.1 CDS PRU_2030 NC_014033.1 2442384 2442728 D identified by glimmer; hypothetical protein 2442384..2442728 Prevotella ruminicola 23 9002164 YP_003575304.1 CDS PRU_2031 NC_014033.1 2442825 2445215 D identified by glimmer; hypothetical protein 2442825..2445215 Prevotella ruminicola 23 8999974 YP_003575305.1 CDS PRU_2032 NC_014033.1 2445274 2445723 D identified by similarity to GB:AAN67722.1; match to protein family HMM PF08291; hypothetical protein 2445274..2445723 Prevotella ruminicola 23 9000262 YP_003575306.1 CDS PRU_2034 NC_014033.1 2447086 2448813 R identified by match to protein family HMM PF00441; match to protein family HMM PF02770; match to protein family HMM PF08028; acyl-CoA dehydrogenase complement(2447086..2448813) Prevotella ruminicola 23 9001426 YP_003575307.1 CDS PRU_2035 NC_014033.1 2448820 2449005 R identified by glimmer; hypothetical protein complement(2448820..2449005) Prevotella ruminicola 23 9000836 YP_003575308.1 CDS etfA NC_014033.1 2449007 2450032 R identified by match to protein family HMM PF00766; match to protein family HMM PF01012; electron transfer flavoprotein subunit alpha complement(2449007..2450032) Prevotella ruminicola 23 9002656 YP_003575309.1 CDS etfB NC_014033.1 2450039 2450911 R identified by match to protein family HMM PF01012; electron transfer flavoprotein subunit beta complement(2450039..2450911) Prevotella ruminicola 23 9002224 YP_003575310.1 CDS PRU_2038 NC_014033.1 2451093 2451815 D identified by similarity to GB:AAO76910.1; hypothetical protein 2451093..2451815 Prevotella ruminicola 23 9001011 YP_003575311.1 CDS PRU_2039 NC_014033.1 2451822 2452196 D identified by similarity to GB:AAO79664.1; match to protein family HMM PF04342; hypothetical protein 2451822..2452196 Prevotella ruminicola 23 9000465 YP_003575312.1 CDS PRU_2040 NC_014033.1 2452203 2458835 R identified by similarity to GB:AAQ65968.1; hypothetical protein complement(2452203..2458835) Prevotella ruminicola 23 9002303 YP_003575313.1 CDS ruvA NC_014033.1 2459157 2459759 R identified by match to protein family HMM PF01330; match to protein family HMM PF07499; match to protein family HMM TIGR00084; Holliday junction DNA helicase RuvA complement(2459157..2459759) Prevotella ruminicola 23 9001633 YP_003575314.1 CDS PRU_2042 NC_014033.1 2459962 2460861 D identified by match to protein family HMM PF01118; match to protein family HMM PF01408; match to protein family HMM PF03447; match to protein family HMM TIGR01921; diaminopimelate dehydrogenase 2459962..2460861 Prevotella ruminicola 23 9000680 YP_003575315.1 CDS purN NC_014033.1 2460862 2461428 D identified by match to protein family HMM PF00551; phosphoribosylglycinamide formyltransferase 2460862..2461428 Prevotella ruminicola 23 9001707 YP_003575316.1 CDS PRU_2044 NC_014033.1 2461446 2462732 R identified by similarity to GB:AAA21748.1; match to protein family HMM PF00070; match to protein family HMM PF01134; match to protein family HMM PF02852; match to protein family HMM PF07992; dihydrolipoyl dehydrogenase complement(2461446..2462732) Prevotella ruminicola 23 9001831 YP_003575317.1 CDS gcvP2 NC_014033.1 2462753 2464162 R identified by similarity to SP:Q8RCW2; glycine dehydrogenase subunit 2 complement(2462753..2464162) Prevotella ruminicola 23 9000888 YP_003575318.1 CDS gcvP1 NC_014033.1 2464159 2465475 R identified by similarity to SP:Q8RCW1; match to protein family HMM PF02347; glycine dehydrogenase subunit 1 complement(2464159..2465475) Prevotella ruminicola 23 9000245 YP_003575319.1 CDS gcvH NC_014033.1 2465589 2465969 R identified by match to protein family HMM PF01597; match to protein family HMM TIGR00527; glycine cleavage system H protein complement(2465589..2465969) Prevotella ruminicola 23 9002255 YP_003575320.1 CDS gcvT NC_014033.1 2465975 2467084 R identified by similarity to SP:Q8RCV9; match to protein family HMM PF01571; match to protein family HMM PF08669; match to protein family HMM TIGR00528; aminomethyltransferase complement(2465975..2467084) Prevotella ruminicola 23 9001560 YP_003575321.1 CDS PRU_2049 NC_014033.1 2467099 2467788 R identified by match to protein family HMM PF03099; biotin/lipoate A/B protein ligase family protein complement(2467099..2467788) Prevotella ruminicola 23 9000955 YP_003575322.1 CDS PRU_2050 NC_014033.1 2467880 2468698 R identified by glimmer; hypothetical protein complement(2467880..2468698) Prevotella ruminicola 23 9001046 YP_003575323.1 CDS aqpZ NC_014033.1 2468953 2469627 D identified by similarity to GB:AAC43518.1; match to protein family HMM PF00230; match to protein family HMM TIGR00861; aquaporin Z 2468953..2469627 Prevotella ruminicola 23 9000428 YP_003575324.1 CDS PRU_2052 NC_014033.1 2469653 2470879 D identified by similarity to SP:P11551; match to protein family HMM PF07690; fucose:hydrogen symporter (FHS) family sugar transporter 2469653..2470879 Prevotella ruminicola 23 9001753 YP_003575325.1 CDS PRU_2053 NC_014033.1 2470899 2472353 R identified by similarity to SP:P06544; match to protein family HMM PF00578; hypothetical protein complement(2470899..2472353) Prevotella ruminicola 23 9001514 YP_003575326.1 CDS PRU_2054 NC_014033.1 2472608 2474047 D identified by similarity to GB:AAO75870.1; lipoprotein 2472608..2474047 Prevotella ruminicola 23 9000650 YP_003575327.1 CDS PRU_2055 NC_014033.1 2474126 2475799 D identified by similarity to GB:AAO79174.1; hypothetical protein 2474126..2475799 Prevotella ruminicola 23 9001137 YP_003575328.1 CDS PRU_2056 NC_014033.1 2475949 2477280 D identified by match to protein family HMM PF02321; outer membrane efflux protein 2475949..2477280 Prevotella ruminicola 23 9001969 YP_003575329.1 CDS PRU_2057 NC_014033.1 2477298 2478551 D identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; RND family efflux transporter MFP subunit 2477298..2478551 Prevotella ruminicola 23 9001572 YP_003575330.1 CDS PRU_2058 NC_014033.1 2478557 2479312 D identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 2478557..2479312 Prevotella ruminicola 23 9002329 YP_003575331.1 CDS PRU_2059 NC_014033.1 2479340 2480557 D identified by match to protein family HMM PF02687; ABC transporter permease 2479340..2480557 Prevotella ruminicola 23 9001542 YP_003575332.1 CDS PRU_2060 NC_014033.1 2480679 2481572 D identified by match to protein family HMM PF06580; sensor histidine kinase 2480679..2481572 Prevotella ruminicola 23 9002355 YP_003575333.1 CDS PRU_2061 NC_014033.1 2481569 2482279 D identified by match to protein family HMM PF00072; match to protein family HMM PF04397; response regulator 2481569..2482279 Prevotella ruminicola 23 9000049 YP_003575334.1 CDS fba NC_014033.1 2482454 2483455 D identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; match to protein family HMM TIGR01859; fructose-1,6-bisphosphate aldolase 2482454..2483455 Prevotella ruminicola 23 9002080 YP_003575335.1 CDS PRU_2063 NC_014033.1 2483554 2485218 D identified by match to protein family HMM PF04616; family 43 glycosyl hydrolase 2483554..2485218 Prevotella ruminicola 23 9002103 YP_003575336.1 CDS PRU_2064 NC_014033.1 2485222 2485893 D identified by similarity to GB:AAQ58335.1; match to protein family HMM PF01980; match to protein family HMM TIGR00104; YaeB/AF_0241 family methyltransferase 2485222..2485893 Prevotella ruminicola 23 9002575 YP_003575337.1 CDS PRU_2065 NC_014033.1 2485976 2487424 R identified by similarity to SP:P00788; toxin domain-containing protein complement(2485976..2487424) Prevotella ruminicola 23 9000402 YP_003575338.1 CDS PRU_2066 NC_014033.1 2487499 2488311 R identified by match to protein family HMM PF01145; SPFH domain / Band 7 family complement(2487499..2488311) Prevotella ruminicola 23 9001013 YP_003575339.1 CDS ald NC_014033.1 2488502 2489605 D identified by similarity to SP:P17556; match to protein family HMM PF01262; match to protein family HMM PF01488; match to protein family HMM PF02826; match to protein family HMM PF05222; match to protein family HMM TIGR00518; alanine dehydrogenase 2488502..2489605 Prevotella ruminicola 23 9000407 YP_003575340.1 CDS PRU_2068 NC_014033.1 2489687 2492677 D identified by similarity to GB:AAR37428.1; match to protein family HMM PF01326; hypothetical protein 2489687..2492677 Prevotella ruminicola 23 9001010 YP_003575341.1 CDS PRU_2069 NC_014033.1 2492789 2494330 D identified by match to protein family HMM PF00672; overlaps another CDS with the same product name; sensor histidine kinase 2492789..2494330 Prevotella ruminicola 23 9002250 YP_003575342.1 CDS PRU_2070 NC_014033.1 2494330 2496243 D identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; overlaps another CDS with the same product name; sensor histidine kinase 2494330..2496243 Prevotella ruminicola 23 9000064 YP_003575343.1 CDS PRU_2071 NC_014033.1 2496246 2497751 R identified by match to protein family HMM PF00120; glutamine synthetase complement(2496246..2497751) Prevotella ruminicola 23 9001909 YP_003575344.1 CDS PRU_2072 NC_014033.1 2497903 2498955 R identified by match to protein family HMM PF04616; family 43 glycosyl hydrolase complement(2497903..2498955) Prevotella ruminicola 23 9000739 YP_003575345.1 CDS PRU_2073 NC_014033.1 2498957 2500804 R identified by match to protein family HMM PF00515; match to protein family HMM PF07980; hypothetical protein complement(2498957..2500804) Prevotella ruminicola 23 9000207 YP_003575346.1 CDS PRU_2074 NC_014033.1 2500827 2504102 R identified by similarity to GB:AAO76726.1; match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein complement(2500827..2504102) Prevotella ruminicola 23 9001082 YP_003575347.1 CDS PRU_2075 NC_014033.1 2504172 2506181 R identified by similarity to GB:AAO78005.1; hypothetical protein complement(2504172..2506181) Prevotella ruminicola 23 9002578 YP_003575348.1 CDS PRU_2076 NC_014033.1 2506215 2507222 R identified by match to protein family HMM PF04616; family 43 glycosyl hydrolase complement(2506215..2507222) Prevotella ruminicola 23 9002015 YP_003575349.1 CDS PRU_2077 NC_014033.1 2507379 2511407 D identified by match to protein family HMM PF00072; match to protein family HMM PF00165; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF07494; sensor histidine kinase/DNA-binding response regulator 2507379..2511407 Prevotella ruminicola 23 9002034 YP_003575350.1 CDS PRU_2078 NC_014033.1 2511487 2511918 D identified by similarity to GB:AAO79094.1; hypothetical protein 2511487..2511918 Prevotella ruminicola 23 9000759 YP_003575351.1 CDS PRU_2079 NC_014033.1 2511923 2512897 R identified by match to protein family HMM PF02016; U61 family peptidase complement(2511923..2512897) Prevotella ruminicola 23 9000208 YP_003575352.1 CDS PRU_2080 NC_014033.1 2513042 2514325 D identified by match to protein family HMM PF01053; match to protein family HMM TIGR01326; O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein 2513042..2514325 Prevotella ruminicola 23 9000715 YP_003575353.1 CDS PRU_2081 NC_014033.1 2514456 2516912 D identified by match to protein family HMM PF07715; outer membrane receptor (OMR) family transporter 2514456..2516912 Prevotella ruminicola 23 9000012 YP_003575354.1 CDS PRU_2082 NC_014033.1 2516990 2518039 D identified by match to protein family HMM PF06580; sensor histidine kinase 2516990..2518039 Prevotella ruminicola 23 9000763 YP_003575355.1 CDS PRU_2083 NC_014033.1 2518068 2518808 D identified by match to protein family HMM PF00072; match to protein family HMM PF04397; DNA-binding response regulator 2518068..2518808 Prevotella ruminicola 23 9001579 YP_003575356.1 CDS PRU_2084 NC_014033.1 2518915 2520252 D identified by similarity to SP:P94316; match to protein family HMM PF00208; match to protein family HMM PF02812; glutamate dehydrogenase, NAD-specific 2518915..2520252 Prevotella ruminicola 23 9002277 YP_003575357.1 CDS PRU_2085 NC_014033.1 2520349 2520861 D identified by match to protein family HMM PF03330; match to protein family HMM TIGR00413; rare lipoprotein A family protein 2520349..2520861 Prevotella ruminicola 23 9000350 YP_003575358.1 CDS PRU_2086 NC_014033.1 2520870 2521568 R identified by similarity to GB:AAO75765.1; match to protein family HMM PF05433; lipoprotein complement(2520870..2521568) Prevotella ruminicola 23 9001170 YP_003575359.1 CDS rplQ NC_014033.1 2521701 2522195 R identified by similarity to SP:P02416; match to protein family HMM PF01196; match to protein family HMM TIGR00059; 50S ribosomal protein L17 complement(2521701..2522195) Prevotella ruminicola 23 9000829 YP_003575360.1 CDS rpoA NC_014033.1 2522226 2523218 R identified by similarity to SP:P20429; match to protein family HMM PF01000; match to protein family HMM PF01193; match to protein family HMM PF03118; match to protein family HMM TIGR02027; DNA-directed RNA polymerase subunit alpha complement(2522226..2523218) Prevotella ruminicola 23 9002641 YP_003575361.1 CDS rpsD NC_014033.1 2523233 2523841 R identified by similarity to SP:P02354; match to protein family HMM PF00163; match to protein family HMM PF01479; match to protein family HMM TIGR01017; 30S ribosomal protein S4 complement(2523233..2523841) Prevotella ruminicola 23 9001353 YP_003575362.1 CDS rpsK NC_014033.1 2523882 2524271 R identified by similarity to SP:P04969; match to protein family HMM PF00411; match to protein family HMM TIGR03632; 30S ribosomal protein S11 complement(2523882..2524271) Prevotella ruminicola 23 9001741 YP_003575363.1 CDS rpsM NC_014033.1 2524304 2524684 R identified by similarity to SP:P20282; match to protein family HMM PF00416; match to protein family HMM TIGR03631; 30S ribosomal protein S13 complement(2524304..2524684) Prevotella ruminicola 23 9000191 YP_003575364.1 CDS rpmJ NC_014033.1 2524797 2524913 R identified by match to protein family HMM PF00444; match to protein family HMM TIGR01022; 50S ribosomal protein L36 complement(2524797..2524913) Prevotella ruminicola 23 9002211 YP_003575365.1 CDS infA NC_014033.1 2524929 2525147 R identified by similarity to SP:P20458; match to protein family HMM PF00575; match to protein family HMM PF01176; match to protein family HMM TIGR00008; translation initiation factor IF-1 complement(2524929..2525147) Prevotella ruminicola 23 9002205 YP_003575366.1 CDS map_2 NC_014033.1 2525157 2525957 R identified by similarity to SP:P19994; match to protein family HMM PF00557; match to protein family HMM TIGR00500; methionine aminopeptidase, type I complement(2525157..2525957) Prevotella ruminicola 23 9001448 YP_003575367.1 CDS secY NC_014033.1 2525964 2527304 R identified by match to protein family HMM PF00344; match to protein family HMM TIGR00967; preprotein translocase subunit SecY complement(2525964..2527304) Prevotella ruminicola 23 9001362 YP_003575368.1 CDS rplO NC_014033.1 2527313 2527759 R identified by similarity to SP:P19946; match to protein family HMM PF00256; match to protein family HMM PF01305; match to protein family HMM TIGR01071; 50S ribosomal protein L15 complement(2527313..2527759) Prevotella ruminicola 23 9000482 YP_003575369.1 CDS rpmD NC_014033.1 2527786 2527962 R identified by similarity to SP:Q9Z9J6; match to protein family HMM PF00327; match to protein family HMM TIGR01308; 50S ribosomal protein L30 complement(2527786..2527962) Prevotella ruminicola 23 9001738 YP_003575370.1 CDS rpsE NC_014033.1 2527977 2528483 R identified by similarity to SP:P21467; match to protein family HMM PF00333; match to protein family HMM PF03719; match to protein family HMM TIGR01021; 30S ribosomal protein S5 complement(2527977..2528483) Prevotella ruminicola 23 9000183 YP_003575371.1 CDS rplR NC_014033.1 2528496 2528849 R identified by similarity to SP:P46899; match to protein family HMM PF00861; match to protein family HMM TIGR00060; 50S ribosomal protein L18 complement(2528496..2528849) Prevotella ruminicola 23 9002168 YP_003575372.1 CDS rplF NC_014033.1 2528875 2529444 R identified by similarity to SP:P02391; match to protein family HMM PF00347; match to protein family HMM TIGR03654; 50S ribosomal protein L6 complement(2528875..2529444) Prevotella ruminicola 23 9001712 YP_003575373.1 CDS rpsH NC_014033.1 2529459 2529854 R identified by similarity to SP:P12879; match to protein family HMM PF00410; 30S ribosomal protein S8 complement(2529459..2529854) Prevotella ruminicola 23 9001736 YP_003575374.1 CDS rpsN NC_014033.1 2529935 2530237 R identified by similarity to SP:P02370; match to protein family HMM PF00253; 30S ribosomal protein S14 complement(2529935..2530237) Prevotella ruminicola 23 9001126 YP_003575375.1 CDS rplE NC_014033.1 2530243 2530800 R identified by similarity to SP:P12877; match to protein family HMM PF00281; match to protein family HMM PF00673; 50S ribosomal protein L5 complement(2530243..2530800) Prevotella ruminicola 23 9000510 YP_003575376.1 CDS rplX NC_014033.1 2530800 2531117 R identified by similarity to SP:P12876; match to protein family HMM PF00467; match to protein family HMM TIGR01079; 50S ribosomal protein L24 complement(2530800..2531117) Prevotella ruminicola 23 9002672 YP_003575377.1 CDS rplN NC_014033.1 2531151 2531516 R identified by match to protein family HMM PF00238; match to protein family HMM TIGR01067; 50S ribosomal protein L14 complement(2531151..2531516) Prevotella ruminicola 23 9002657 YP_003575378.1 CDS rpsQ NC_014033.1 2531519 2531785 R identified by similarity to SP:P23828; match to protein family HMM PF00366; match to protein family HMM TIGR03635; 30S ribosomal protein S17 complement(2531519..2531785) Prevotella ruminicola 23 9002030 YP_003575379.1 CDS rpmC NC_014033.1 2531788 2531982 R identified by similarity to SP:P04457; match to protein family HMM PF00831; match to protein family HMM TIGR00012; 50S ribosomal protein L29 complement(2531788..2531982) Prevotella ruminicola 23 9000046 YP_003575380.1 CDS rplP NC_014033.1 2531989 2532417 R identified by similarity to SP:P14577; match to protein family HMM PF00252; match to protein family HMM TIGR01164; 50S ribosomal protein L16 complement(2531989..2532417) Prevotella ruminicola 23 9002210 YP_003575381.1 CDS rpsC NC_014033.1 2532443 2533165 R identified by similarity to SP:P21465; match to protein family HMM PF00189; match to protein family HMM PF00417; match to protein family HMM PF07650; match to protein family HMM TIGR01009; 30S ribosomal protein S3 complement(2532443..2533165) Prevotella ruminicola 23 9002280 YP_003575382.1 CDS rplV NC_014033.1 2533168 2533575 R identified by similarity to SP:P42060; match to protein family HMM PF00237; match to protein family HMM TIGR01044; 50S ribosomal protein L22 complement(2533168..2533575) Prevotella ruminicola 23 9001535 YP_003575383.1 CDS rpsS NC_014033.1 2533616 2533882 R identified by match to protein family HMM PF00203; match to protein family HMM TIGR01050; 30S ribosomal protein S19 complement(2533616..2533882) Prevotella ruminicola 23 9001872 YP_003575384.1 CDS rplB NC_014033.1 2533904 2534731 R identified by similarity to SP:Q9Z9L1; match to protein family HMM PF00181; match to protein family HMM PF03947; match to protein family HMM TIGR01171; 50S ribosomal protein L2 complement(2533904..2534731) Prevotella ruminicola 23 9002479 YP_003575385.1 CDS rplW NC_014033.1 2534737 2535084 R identified by match to protein family HMM PF00276; 50S ribosomal protein L23 complement(2534737..2535084) Prevotella ruminicola 23 9001903 YP_003575386.1 CDS rplD NC_014033.1 2535101 2535730 R identified by similarity to SP:P28601; match to protein family HMM PF00573; 50S ribosomal protein L4 complement(2535101..2535730) Prevotella ruminicola 23 9002475 YP_003575387.1 CDS rplC NC_014033.1 2535732 2536346 R identified by similarity to SP:P28600; match to protein family HMM PF00297; match to protein family HMM TIGR03625; 50S ribosomal protein L3 complement(2535732..2536346) Prevotella ruminicola 23 8999990 YP_003575388.1 CDS PRU_2116 NC_014033.1 2537195 2537338 R identified by glimmer; hypothetical protein complement(2537195..2537338) Prevotella ruminicola 23 9001234 YP_003575389.1 CDS PRU_2117 NC_014033.1 2537343 2538611 R identified by glimmer; hypothetical protein complement(2537343..2538611) Prevotella ruminicola 23 9001892 YP_003575390.1 CDS PRU_2119 NC_014033.1 2541728 2542276 R lipoprotein complement(2541728..2542276) Prevotella ruminicola 23 9002317 YP_003575391.1 CDS PRU_2120 NC_014033.1 2542833 2544449 R identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter permease/ATP-binding protein complement(2542833..2544449) Prevotella ruminicola 23 9001540 YP_003575392.1 CDS PRU_2121 NC_014033.1 2544486 2544755 R identified by similarity to GB:AAO75164.1; hypothetical protein complement(2544486..2544755) Prevotella ruminicola 23 9000404 YP_003575393.1 CDS PRU_2122 NC_014033.1 2544793 2545230 R identified by similarity to GB:AAO75181.1; hypothetical protein complement(2544793..2545230) Prevotella ruminicola 23 9002412 YP_003575394.1 CDS PRU_2123 NC_014033.1 2545252 2546106 R identified by similarity to GB:AAO75166.1; hypothetical protein complement(2545252..2546106) Prevotella ruminicola 23 9001451 YP_003575395.1 CDS PRU_2124 NC_014033.1 2546097 2547194 R identified by similarity to GB:AAO75165.1; hypothetical protein complement(2546097..2547194) Prevotella ruminicola 23 9001360 YP_003575396.1 CDS PRU_2125 NC_014033.1 2547278 2549782 R identified by similarity to GB:AAQ65640.1; hypothetical protein complement(2547278..2549782) Prevotella ruminicola 23 9000138 YP_003575397.1 CDS PRU_2126 NC_014033.1 2549779 2550573 R identified by similarity to GB:AAQ65638.1; match to protein family HMM PF09697; hypothetical protein complement(2549779..2550573) Prevotella ruminicola 23 9002287 YP_003575398.1 CDS PRU_2127 NC_014033.1 2550694 2551971 R identified by similarity to GB:AAO76797.1; hypothetical protein complement(2550694..2551971) Prevotella ruminicola 23 9001028 YP_003575399.1 CDS PRU_2128 NC_014033.1 2551940 2553493 R identified by match to protein family HMM PF03544; match to protein family HMM PF05569; match to protein family HMM TIGR01352; TonB family protein complement(2551940..2553493) Prevotella ruminicola 23 9000422 YP_003575400.1 CDS PRU_2129 NC_014033.1 2553579 2553938 R identified by similarity to SP:P06555; match to protein family HMM PF03965; transcriptional regulator complement(2553579..2553938) Prevotella ruminicola 23 9000490 YP_003575401.1 CDS rpsJ NC_014033.1 2554159 2554464 R identified by similarity to SP:P21471; match to protein family HMM PF00338; match to protein family HMM TIGR01049; 30S ribosomal protein S10 complement(2554159..2554464) Prevotella ruminicola 23 9000722 YP_003575402.1 CDS fusA NC_014033.1 2554546 2556672 R identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231; match to protein family HMM TIGR00484; translation elongation factor G complement(2554546..2556672) Prevotella ruminicola 23 9001709 YP_003575403.1 CDS rpsG NC_014033.1 2556707 2557183 R identified by similarity to SP:P21469; match to protein family HMM PF00177; match to protein family HMM TIGR01029; 30S ribosomal protein S7 complement(2556707..2557183) Prevotella ruminicola 23 9000178 YP_003575404.1 CDS rpsL NC_014033.1 2557340 2557720 R identified by match to protein family HMM PF00164; match to protein family HMM TIGR00981; 30S ribosomal protein S12 complement(2557340..2557720) Prevotella ruminicola 23 9000109 YP_003575405.1 CDS rpoC NC_014033.1 2557998 2562329 R identified by match to protein family HMM PF00623; match to protein family HMM PF04983; match to protein family HMM PF04997; match to protein family HMM PF04998; match to protein family HMM PF05000; match to protein family HMM TIGR02386; DNA-directed RNA polymerase subunit beta' complement(2557998..2562329) Prevotella ruminicola 23 9000956 YP_003575406.1 CDS rpoB NC_014033.1 2562376 2566188 R identified by similarity to SP:O52271; match to protein family HMM PF00562; match to protein family HMM PF04560; match to protein family HMM PF04561; match to protein family HMM PF04563; match to protein family HMM PF04565; match to protein family HMM TIGR02013; DNA-directed RNA polymerase subunit beta complement(2562376..2566188) Prevotella ruminicola 23 9001417 YP_003575407.1 CDS rplL NC_014033.1 2566266 2566646 R identified by similarity to SP:P29396; match to protein family HMM PF00542; match to protein family HMM TIGR00855; 50S ribosomal protein L7/L12 complement(2566266..2566646) Prevotella ruminicola 23 9002192 YP_003575408.1 CDS rplJ NC_014033.1 2566695 2567210 R identified by match to protein family HMM PF00466; 50S ribosomal protein L10 complement(2566695..2567210) Prevotella ruminicola 23 9000263 YP_003575409.1 CDS rplA NC_014033.1 2567231 2567923 R identified by match to protein family HMM PF00687; match to protein family HMM TIGR01169; 50S ribosomal protein L1 complement(2567231..2567923) Prevotella ruminicola 23 9001060 YP_003575410.1 CDS rplK NC_014033.1 2567946 2568386 R identified by similarity to SP:Q06796; match to protein family HMM PF00298; match to protein family HMM PF03946; match to protein family HMM TIGR01632; 50S ribosomal protein L11 complement(2567946..2568386) Prevotella ruminicola 23 9002735 YP_003575411.1 CDS nusG NC_014033.1 2568482 2569027 R identified by similarity to SP:P16921; match to protein family HMM PF00467; match to protein family HMM PF02357; match to protein family HMM TIGR00922; transcription termination/antitermination factor NusG complement(2568482..2569027) Prevotella ruminicola 23 9001959 YP_003575412.1 CDS secE NC_014033.1 2569045 2569236 R identified by match to protein family HMM PF00584; match to protein family HMM TIGR00964; preprotein translocase subunit SecE complement(2569045..2569236) Prevotella ruminicola 23 9001799 YP_003575413.1 CDS tuf NC_014033.1 2569411 2570595 R identified by similarity to SP:P02990; match to protein family HMM PF00009; match to protein family HMM PF03143; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR00485; translation elongation factor Tu complement(2569411..2570595) Prevotella ruminicola 23 9002780 YP_003575414.1 CDS yfiA NC_014033.1 2571184 2571483 R identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741; ribosomal subunit interface protein complement(2571184..2571483) Prevotella ruminicola 23 9002794 YP_003575415.1 CDS xerC NC_014033.1 2571524 2572402 R identified by match to protein family HMM PF00589; match to protein family HMM PF02899; tyrosine recombinase XerC complement(2571524..2572402) Prevotella ruminicola 23 9000062 YP_003575416.1 CDS rpsU NC_014033.1 2572481 2572672 R identified by match to protein family HMM PF01165; match to protein family HMM TIGR00030; 30S ribosomal protein S21 complement(2572481..2572672) Prevotella ruminicola 23 9002315 YP_003575417.1 CDS PRU_2151 NC_014033.1 2572830 2574971 R identified by similarity to GB:AAO76810.1; hypothetical protein complement(2572830..2574971) Prevotella ruminicola 23 9002276 YP_003575418.1 CDS PRU_2152 NC_014033.1 2575031 2576494 R identified by glimmer; hypothetical protein complement(2575031..2576494) Prevotella ruminicola 23 9001401 YP_003575419.1 CDS PRU_2153 NC_014033.1 2576871 2577470 R identified by similarity to GB:AAO76531.1; hypothetical protein complement(2576871..2577470) Prevotella ruminicola 23 9000604 YP_003575420.1 CDS PRU_2154 NC_014033.1 2577612 2577917 R identified by match to protein family HMM PF01909; nucleotidyltransferase domain-containing protein complement(2577612..2577917) Prevotella ruminicola 23 9002616 YP_003575421.1 CDS PRU_2155 NC_014033.1 2577914 2578354 R identified by match to protein family HMM PF08780; match to protein family HMM TIGR01987; nucleotidyltransferase substrate-binding family protein complement(2577914..2578354) Prevotella ruminicola 23 9000769 YP_003575422.1 CDS PRU_2156 NC_014033.1 2578610 2580955 D identified by similarity to GB:AAO78428.1; hypothetical protein 2578610..2580955 Prevotella ruminicola 23 9001597 YP_003575423.1 CDS PRU_2157 NC_014033.1 2580959 2582731 R identified by match to protein family HMM PF00557; M24B subfamily peptidase complement(2580959..2582731) Prevotella ruminicola 23 9002390 YP_003575424.1 CDS PRU_2158 NC_014033.1 2582888 2583874 D identified by similarity to SP:P10584; match to protein family HMM PF00056; match to protein family HMM PF02866; malate dehydrogenase 2582888..2583874 Prevotella ruminicola 23 9001963 YP_003575425.1 CDS PRU_2159 NC_014033.1 2583931 2584419 D identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; match to protein family HMM TIGR02985; ECF family RNA polymerase sigma-70 factor 2583931..2584419 Prevotella ruminicola 23 9001378 YP_003575426.1 CDS PRU_2160 NC_014033.1 2584481 2585191 D identified by glimmer; hypothetical protein 2584481..2585191 Prevotella ruminicola 23 9000367 YP_003575427.1 CDS PRU_2161 NC_014033.1 2585289 2587805 D identified by similarity to GB:AAO77279.1; match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein 2585289..2587805 Prevotella ruminicola 23 9001199 YP_003575428.1 CDS PRU_2162 NC_014033.1 2587857 2588915 D identified by similarity to GB:AAO77280.1; hypothetical protein 2587857..2588915 Prevotella ruminicola 23 9000992 YP_003575429.1 CDS PRU_2163 NC_014033.1 2588920 2589372 D identified by glimmer; hypothetical protein 2588920..2589372 Prevotella ruminicola 23 9001791 YP_003575430.1 CDS PRU_2164 NC_014033.1 2589394 2589921 D identified by match to protein family HMM PF00132; bacterial transferase hexapeptide repeat protein 2589394..2589921 Prevotella ruminicola 23 9002125 YP_003575431.1 CDS PRU_2165 NC_014033.1 2589926 2591032 R identified by match to protein family HMM PF00149; Ser/Thr protein phosphatase family protein complement(2589926..2591032) Prevotella ruminicola 23 9001582 YP_003575432.1 CDS PRU_2166 NC_014033.1 2591047 2592288 R identified by similarity to SP:P23282; match to protein family HMM PF04413; glycosyl transferase complement(2591047..2592288) Prevotella ruminicola 23 9001235 YP_003575433.1 CDS gltX NC_014033.1 2592288 2593805 R identified by similarity to SP:P22249; match to protein family HMM PF00749; match to protein family HMM TIGR00464; glutamate--tRNA ligase complement(2592288..2593805) Prevotella ruminicola 23 9000105 YP_003575434.1 CDS PRU_2168 NC_014033.1 2593892 2595943 D identified by match to protein family HMM PF01966; match to protein family HMM PF07698; match to protein family HMM TIGR00277; membrane-associated receptor 2593892..2595943 Prevotella ruminicola 23 9002014 YP_003575435.1 CDS PRU_2169 NC_014033.1 2596119 2597729 D identified by similarity to GB:AAO76681.1; hypothetical protein 2596119..2597729 Prevotella ruminicola 23 9001189 YP_003575436.1 CDS priA NC_014033.1 2597739 2599994 R identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; match to protein family HMM TIGR00595; primosomal protein N' complement(2597739..2599994) Prevotella ruminicola 23 9001687 YP_003575437.1 CDS PRU_2171 NC_014033.1 2599998 2600612 R identified by similarity to GB:AAO77859.1; hypothetical protein complement(2599998..2600612) Prevotella ruminicola 23 9001680 YP_003575438.1 CDS PRU_2172 NC_014033.1 2600730 2601785 R identified by similarity to GB:AAQ65510.1; match to protein family HMM TIGR03523; hypothetical protein complement(2600730..2601785) Prevotella ruminicola 23 9000711 YP_003575439.1 CDS PRU_2173 NC_014033.1 2601803 2603362 R identified by similarity to GB:AAQ65509.1; match to protein family HMM TIGR03517; hypothetical protein complement(2601803..2603362) Prevotella ruminicola 23 9000143 YP_003575440.1 CDS PRU_2174 NC_014033.1 2603368 2604084 R identified by similarity to GB:AAH55225.1; match to protein family HMM TIGR03513; hypothetical protein complement(2603368..2604084) Prevotella ruminicola 23 9000120 YP_003575441.1 CDS PRU_2175 NC_014033.1 2604153 2605589 R identified by similarity to GB:AAQ65507.1; match to protein family HMM PF03781; lipoprotein complement(2604153..2605589) Prevotella ruminicola 23 9001323 YP_003575442.1 CDS PRU_2176 NC_014033.1 2605604 2606542 R identified by similarity to GB:AAQ65506.1; match to protein family HMM TIGR03519; hypothetical protein complement(2605604..2606542) Prevotella ruminicola 23 9000589 YP_003575443.1 CDS PRU_2177 NC_014033.1 2606697 2609195 D identified by similarity to GB:BAA86934.1; match to protein family HMM PF08760; glutaminase 2606697..2609195 Prevotella ruminicola 23 9001216 YP_003575444.1 CDS PRU_2178 NC_014033.1 2609206 2611494 D identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; alpha-1,2-mannosidase family protein 2609206..2611494 Prevotella ruminicola 23 9001807 YP_003575445.1 CDS PRU_2179 NC_014033.1 2611588 2611941 D identified by match to protein family HMM PF03551; PadR family transcriptional regulator 2611588..2611941 Prevotella ruminicola 23 9002460 YP_003575446.1 CDS PRU_2180 NC_014033.1 2611962 2613539 D identified by match to protein family HMM PF04024; PspC domain-containing protein 2611962..2613539 Prevotella ruminicola 23 9000203 YP_003575447.1 CDS PRU_2181 NC_014033.1 2613595 2617176 R identified by match to protein family HMM PF00754; match to protein family HMM PF01074; match to protein family HMM PF07748; match to protein family HMM PF09261; family 38 glycosyl hydrolase/DS domain-containing protein complement(2613595..2617176) Prevotella ruminicola 23 9000800 YP_003575448.1 CDS PRU_2182 NC_014033.1 2617258 2619381 R identified by similarity to SP:Q9F234; match to protein family HMM PF01055; alpha-glucosidase family protein complement(2617258..2619381) Prevotella ruminicola 23 9001419 YP_003575449.1 CDS PRU_2183 NC_014033.1 2619415 2620119 R identified by similarity to GB:AAO78194.1; hypothetical protein complement(2619415..2620119) Prevotella ruminicola 23 9000655 YP_003575450.1 CDS PRU_2184 NC_014033.1 2620151 2622328 R identified by match to protein family HMM PF01055; family 31 glycosyl hydrolase complement(2620151..2622328) Prevotella ruminicola 23 9002748 YP_003575451.1 CDS PRU_2185 NC_014033.1 2622584 2624185 R identified by similarity to GB:AAO79174.1; hypothetical protein complement(2622584..2624185) Prevotella ruminicola 23 9002589 YP_003575452.1 CDS PRU_2186 NC_014033.1 2624356 2625486 R identified by similarity to GB:AAO78194.1; lipoprotein complement(2624356..2625486) Prevotella ruminicola 23 9001792 YP_003575453.1 CDS PRU_2187 NC_014033.1 2625506 2627431 R identified by similarity to GB:AAO79143.1; match to protein family HMM PF07980; lipoprotein complement(2625506..2627431) Prevotella ruminicola 23 9001169 YP_003575454.1 CDS PRU_2188 NC_014033.1 2627449 2630586 R identified by similarity to GB:AAO75546.1; match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein complement(2627449..2630586) Prevotella ruminicola 23 9002266 YP_003575455.1 CDS PRU_2189 NC_014033.1 2630859 2631080 R identified by similarity to GB:AAM72893.1; hypothetical protein complement(2630859..2631080) Prevotella ruminicola 23 9001606 YP_003575456.1 CDS PRU_2190 NC_014033.1 2631145 2631708 R identified by match to protein family HMM PF01923; match to protein family HMM TIGR00636; ATP:cob(I)alamin adenosyltransferase complement(2631145..2631708) Prevotella ruminicola 23 9000819 YP_003575457.1 CDS PRU_2196 NC_014033.1 2638037 2638627 D identified by similarity to GB:AAO76191.1; hypothetical protein 2638037..2638627 Prevotella ruminicola 23 9002766 YP_003575458.1 CDS argR NC_014033.1 2638712 2639188 D identified by similarity to SP:P17893; match to protein family HMM PF01316; match to protein family HMM PF02863; match to protein family HMM TIGR01529; arginine repressor 2638712..2639188 Prevotella ruminicola 23 9002613 YP_003575459.1 CDS PRU_2198 NC_014033.1 2639200 2639805 D identified by similarity to GB:AAO78866.1; hypothetical protein 2639200..2639805 Prevotella ruminicola 23 9001558 YP_003575460.1 CDS argG NC_014033.1 2639858 2641060 D identified by match to protein family HMM PF00764; argininosuccinate synthase 2639858..2641060 Prevotella ruminicola 23 9002364 YP_003575461.1 CDS argC NC_014033.1 2641094 2642059 D identified by similarity to SP:P23715; match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR01850; N-acetyl-gamma-glutamyl-phosphate reductase 2641094..2642059 Prevotella ruminicola 23 9000076 YP_003575462.1 CDS argD NC_014033.1 2642082 2643221 D identified by similarity to SP:Q93R93; match to protein family HMM PF00202; acetylornithine transaminase 2642082..2643221 Prevotella ruminicola 23 9000839 YP_003575463.1 CDS proC NC_014033.1 2643218 2643997 D identified by match to protein family HMM PF01210; match to protein family HMM PF03446; match to protein family HMM PF03807; pyrroline-5-carboxylate reductase 2643218..2643997 Prevotella ruminicola 23 9002711 YP_003575464.1 CDS PRU_2203 NC_014033.1 2643994 2644608 D identified by glimmer; hypothetical protein 2643994..2644608 Prevotella ruminicola 23 9000023 YP_003575465.1 CDS PRU_2204 NC_014033.1 2644623 2645186 D identified by match to protein family HMM PF01381; match to protein family HMM PF07883; DNA-binding protein 2644623..2645186 Prevotella ruminicola 23 9001105 YP_003575466.1 CDS PRU_2205 NC_014033.1 2645215 2646867 D identified by match to protein family HMM PF00501; AMP-binding enzyme 2645215..2646867 Prevotella ruminicola 23 9001822 YP_003575467.1 CDS PRU_2206 NC_014033.1 2646884 2647243 D identified by similarity to SP:Q8A5K3; match to protein family HMM PF02021; hypothetical protein 2646884..2647243 Prevotella ruminicola 23 9001495 YP_003575468.1 CDS proB NC_014033.1 2647247 2648014 D identified by match to protein family HMM PF00696; match to protein family HMM TIGR01027; glutamate 5-kinase 2647247..2648014 Prevotella ruminicola 23 9002322 YP_003575469.1 CDS proA NC_014033.1 2648022 2649263 D identified by similarity to SP:P07004; match to protein family HMM TIGR00407; gamma-glutamyl phosphate reductase 2648022..2649263 Prevotella ruminicola 23 9001396 YP_003575470.1 CDS PRU_2209 NC_014033.1 2649424 2651370 D identified by match to protein family HMM PF07228; SpoIIE domain-containing protein 2649424..2651370 Prevotella ruminicola 23 9002165 YP_003575471.1 CDS PRU_2210 NC_014033.1 2651367 2652332 D identified by similarity to SP:Q51742; similarity to PDB:1JS1_X; match to protein family HMM PF00185; match to protein family HMM PF02729; transcarbamylase 2651367..2652332 Prevotella ruminicola 23 9000541 YP_003575472.1 CDS PRU_2211 NC_014033.1 2652407 2654386 D identified by match to protein family HMM PF02518; ATPase 2652407..2654386 Prevotella ruminicola 23 9001237 YP_003575473.1 CDS PRU_2212 NC_014033.1 2654427 2655869 R identified by match to protein family HMM PF00657; acetylesterase/GDSL-like lipase/acylhydrolase complement(2654427..2655869) Prevotella ruminicola 23 9000963 YP_003575474.1 CDS PRU_2213 NC_014033.1 2655885 2656862 R identified by similarity to GB:CAG37251.1; hypothetical protein complement(2655885..2656862) Prevotella ruminicola 23 9002434 YP_003575475.1 CDS PRU_2214 NC_014033.1 2656967 2657995 D identified by similarity to SP:O50584; match to protein family HMM PF01212; L-threonine aldolase, low-specificity 2656967..2657995 Prevotella ruminicola 23 9002225 YP_003575476.1 CDS PRU_2215 NC_014033.1 2657992 2659398 D identified by glimmer; hypothetical protein 2657992..2659398 Prevotella ruminicola 23 9002065 YP_003575477.1 CDS PRU_2216 NC_014033.1 2659395 2660801 D identified by match to protein family HMM PF07676; lipoprotein 2659395..2660801 Prevotella ruminicola 23 9001473 YP_003575478.1 CDS PRU_2217 NC_014033.1 2660816 2662234 R identified by glimmer; hypothetical protein complement(2660816..2662234) Prevotella ruminicola 23 9001215 YP_003575479.1 CDS PRU_2218 NC_014033.1 2662282 2663832 R identified by glimmer; hypothetical protein complement(2662282..2663832) Prevotella ruminicola 23 9001035 YP_003575480.1 CDS PRU_2219 NC_014033.1 2663939 2664595 R lipoprotein complement(2663939..2664595) Prevotella ruminicola 23 9000598 YP_003575481.1 CDS PRU_2220 NC_014033.1 2664598 2666085 R lipoprotein complement(2664598..2666085) Prevotella ruminicola 23 9002597 YP_003575482.1 CDS PRU_2221 NC_014033.1 2666069 2667667 R identified by glimmer; hypothetical protein complement(2666069..2667667) Prevotella ruminicola 23 9000751 YP_003575483.1 CDS PRU_2222 NC_014033.1 2667800 2670157 D identified by similarity to GB:BAA12070.1; cellulase domain-containing protein 2667800..2670157 Prevotella ruminicola 23 9000750 YP_003575484.1 CDS PRU_2223 NC_014033.1 2670257 2671684 R identified by glimmer; hypothetical protein complement(2670257..2671684) Prevotella ruminicola 23 8999975 YP_003575485.1 CDS PRU_2224 NC_014033.1 2671762 2673621 R identified by match to protein family HMM PF07980; lipoprotein complement(2671762..2673621) Prevotella ruminicola 23 9002127 YP_003575486.1 CDS PRU_2225 NC_014033.1 2673646 2676909 R identified by similarity to GB:AAO78416.1; match to protein family HMM PF00593; match to protein family HMM PF07715; TonB dependent receptor complement(2673646..2676909) Prevotella ruminicola 23 9000845 YP_003575487.1 CDS PRU_2226 NC_014033.1 2677655 2680795 D identified by similarity to GB:AAO78000.1; match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein 2677655..2680795 Prevotella ruminicola 23 9000301 YP_003575488.1 CDS PRU_2227 NC_014033.1 2680808 2682838 D identified by match to protein family HMM PF07980; lipoprotein 2680808..2682838 Prevotella ruminicola 23 9000617 YP_003575489.1 CDS PRU_2228 NC_014033.1 2682870 2685704 D identified by similarity to GB:AAO77926.1; match to protein family HMM PF07715; hypothetical protein 2682870..2685704 Prevotella ruminicola 23 9001489 YP_003575490.1 CDS PRU_2229 NC_014033.1 2685715 2687394 D identified by similarity to GB:AAO77927.1; match to protein family HMM PF07980; lipoprotein 2685715..2687394 Prevotella ruminicola 23 9001626 YP_003575491.1 CDS PRU_2230 NC_014033.1 2687432 2689396 D lipoprotein 2687432..2689396 Prevotella ruminicola 23 9000864 YP_003575492.1 CDS PRU_2231 NC_014033.1 2689579 2691333 D identified by similarity to GB:AAC36862.1; match to protein family HMM PF00150; endo-1,4-beta-xylanase/cellulase 2689579..2691333 Prevotella ruminicola 23 9000545 YP_003575493.1 CDS PRU_2232 NC_014033.1 2691343 2693601 D identified by similarity to SP:Q9F234; match to protein family HMM PF01055; alpha-glucosidase family protein 2691343..2693601 Prevotella ruminicola 23 9002403 YP_003575494.1 CDS PRU_2233 NC_014033.1 2693605 2694285 R identified by similarity to GB:BAD47241.1; lipoprotein complement(2693605..2694285) Prevotella ruminicola 23 9002700 YP_003575495.1 CDS PRU_2234 NC_014033.1 2694282 2695424 R identified by similarity to GB:AAQ65898.1; hypothetical protein complement(2694282..2695424) Prevotella ruminicola 23 9001954 YP_003575496.1 CDS PRU_2235 NC_014033.1 2695428 2696420 R identified by similarity to SP:P15051; match to protein family HMM PF01820; match to protein family HMM PF02655; match to protein family HMM PF07478; match to protein family HMM TIGR01205; D-alanine--D-alanine ligase complement(2695428..2696420) Prevotella ruminicola 23 9000824 YP_003575497.1 CDS PRU_2236 NC_014033.1 2696442 2697485 R identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00005; ribosomal large subunit pseudouridine synthase, RluA family complement(2696442..2697485) Prevotella ruminicola 23 9002611 YP_003575498.1 CDS PRU_2237 NC_014033.1 2697482 2698132 R identified by match to protein family HMM PF03793; PASTA domain-containing protein complement(2697482..2698132) Prevotella ruminicola 23 9000396 YP_003575499.1 CDS rpmH NC_014033.1 2698238 2698393 R identified by similarity to SP:P02437; match to protein family HMM PF00468; match to protein family HMM TIGR01030; 50S ribosomal protein L34 complement(2698238..2698393) Prevotella ruminicola 23 9000197 YP_003575500.1 CDS efp NC_014033.1 2698569 2699135 D identified by match to protein family HMM PF01132; match to protein family HMM PF08207; match to protein family HMM PF09285; match to protein family HMM TIGR00038; translation elongation factor P 2698569..2699135 Prevotella ruminicola 23 9000947 YP_003575501.1 CDS PRU_2240 NC_014033.1 2699135 2700124 D identified by match to protein family HMM PF00535; group 2 family glycosyltransferase 2699135..2700124 Prevotella ruminicola 23 9001443 YP_003575502.1 CDS radC NC_014033.1 2700121 2700810 D identified by match to protein family HMM PF04002; match to protein family HMM TIGR00608; DNA repair protein RadC 2700121..2700810 Prevotella ruminicola 23 9002185 YP_003575503.1 CDS PRU_2242 NC_014033.1 2700832 2701524 R identified by glimmer; hypothetical protein complement(2700832..2701524) Prevotella ruminicola 23 9000259 YP_003575504.1 CDS PRU_2243 NC_014033.1 2701547 2705335 R identified by similarity to GB:AAC12946.1; adenylate cyclase complement(2701547..2705335) Prevotella ruminicola 23 9000840 YP_003575505.1 CDS PRU_2245 NC_014033.1 2706443 2706979 R identified by similarity to GB:AAM25339.1; hypothetical protein complement(2706443..2706979) Prevotella ruminicola 23 9000293 YP_003575506.1 CDS PRU_2246 NC_014033.1 2707187 2707747 D identified by glimmer; hypothetical protein 2707187..2707747 Prevotella ruminicola 23 9001190 YP_003575507.1 CDS PRU_2247 NC_014033.1 2707769 2711797 D identified by similarity to GB:AAC12946.1; adenylate cyclase domain-containing protein 2707769..2711797 Prevotella ruminicola 23 9000355 YP_003575508.1 CDS PRU_2248 NC_014033.1 2711818 2712426 D identified by glimmer; hypothetical protein 2711818..2712426 Prevotella ruminicola 23 9002449 YP_003575509.1 CDS PRU_2249 NC_014033.1 2712971 2714293 R identified by glimmer; hypothetical protein complement(2712971..2714293) Prevotella ruminicola 23 9001912 YP_003575510.1 CDS PRU_2250 NC_014033.1 2714313 2714765 R identified by glimmer; hypothetical protein complement(2714313..2714765) Prevotella ruminicola 23 9000855 YP_003575511.1 CDS PRU_2251 NC_014033.1 2714812 2716530 R identified by match to protein family HMM PF00165; match to protein family HMM PF01344; AraC family transcriptional regulator complement(2714812..2716530) Prevotella ruminicola 23 9000266 YP_003575512.1 CDS PRU_2252 NC_014033.1 2716570 2716917 D identified by similarity to GB:AAO78801.1; match to protein family HMM PF01883; hypothetical protein 2716570..2716917 Prevotella ruminicola 23 9001826 YP_003575513.1 CDS PRU_2253 NC_014033.1 2716919 2717683 D identified by similarity to SP:Q9I2V0; match to protein family HMM PF00149; LpxH family protein 2716919..2717683 Prevotella ruminicola 23 9002401 YP_003575514.1 CDS PRU_2255 NC_014033.1 2718844 2719866 D identified by match to protein family HMM PF00294; pfkB family kinase 2718844..2719866 Prevotella ruminicola 23 9000235 YP_003575515.1 CDS PRU_2256 NC_014033.1 2719937 2720623 D lipoprotein 2719937..2720623 Prevotella ruminicola 23 9001423 YP_003575516.1 CDS PRU_2257 NC_014033.1 2720630 2721169 D identified by match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; ECF family RNA polymerase sigma-70 factor 2720630..2721169 Prevotella ruminicola 23 9002091 YP_003575517.1 CDS PRU_2258 NC_014033.1 2721166 2722338 D identified by similarity to GB:AAO79826.1; hypothetical protein 2721166..2722338 Prevotella ruminicola 23 9001433 YP_003575518.1 CDS ackA NC_014033.1 2722881 2724074 R identified by similarity to SP:Q9WYB1; match to protein family HMM PF00871; match to protein family HMM TIGR00016; acetate kinase complement(2722881..2724074) Prevotella ruminicola 23 9002188 YP_003575519.1 CDS pta NC_014033.1 2724106 2725116 R identified by similarity to SP:P39646; match to protein family HMM PF01515; match to protein family HMM TIGR00651; phosphate acetyltransferase complement(2724106..2725116) Prevotella ruminicola 23 9002579 YP_003575520.1 CDS PRU_2261 NC_014033.1 2725156 2725938 R identified by similarity to GB:AAQ66618.1; match to protein family HMM PF02457; match to protein family HMM TIGR00159; hypothetical protein complement(2725156..2725938) Prevotella ruminicola 23 9000582 YP_003575521.1 CDS folP NC_014033.1 2725941 2726741 R identified by similarity to SP:P26282; match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase complement(2725941..2726741) Prevotella ruminicola 23 9001017 YP_003575522.1 CDS murF NC_014033.1 2726724 2728160 D identified by similarity to SP:P96613; match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01143; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 2726724..2728160 Prevotella ruminicola 23 9001613 YP_003575523.1 CDS PRU_2264 NC_014033.1 2728291 2729073 D identified by similarity to GB:AAO78216.1; hypothetical protein 2728291..2729073 Prevotella ruminicola 23 9000079 YP_003575524.1 CDS PRU_2265 NC_014033.1 2729102 2731105 D identified by glimmer; hypothetical protein 2729102..2731105 Prevotella ruminicola 23 9000993 YP_003575525.1 CDS PRU_2267 NC_014033.1 2731448 2733280 D identified by similarity to GB:BAB21494.1; match to protein family HMM PF01855; match to protein family HMM TIGR03710; keto/oxoacid ferredoxin oxidoreductase subunit alpha 2731448..2733280 Prevotella ruminicola 23 9002801 YP_003575526.1 CDS PRU_2268 NC_014033.1 2733362 2734366 D identified by similarity to GB:BAB21495.1; match to protein family HMM PF02775; keto/oxoacid ferredoxin oxidoreductase subunit beta 2733362..2734366 Prevotella ruminicola 23 9002066 YP_003575527.1 CDS PRU_2269 NC_014033.1 2734612 2736069 D identified by match to protein family HMM PF00939; match to protein family HMM TIGR00785; divalent anion:sodium symporter (DASS) family transporter 2734612..2736069 Prevotella ruminicola 23 9001848 YP_003575528.1 CDS PRU_2270 NC_014033.1 2736191 2736850 R identified by similarity to SP:P25532; match to protein family HMM PF00156; uracil phosphoribosyltransferase complement(2736191..2736850) Prevotella ruminicola 23 9002461 YP_003575529.1 CDS PRU_2271 NC_014033.1 2736925 2738568 R identified by match to protein family HMM PF00165; match to protein family HMM PF00532; AraC family transcriptional regulator complement(2736925..2738568) Prevotella ruminicola 23 9000901 YP_003575530.1 CDS PRU_2272 NC_014033.1 2738705 2741815 D identified by similarity to GB:AAO76870.1; match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein 2738705..2741815 Prevotella ruminicola 23 9000694 YP_003575531.1 CDS PRU_2273 NC_014033.1 2741852 2743603 D identified by match to protein family HMM PF07980; lipoprotein 2741852..2743603 Prevotella ruminicola 23 9001690 YP_003575532.1 CDS PRU_2274 NC_014033.1 2743649 2745037 D lipoprotein 2743649..2745037 Prevotella ruminicola 23 9001337 YP_003575533.1 CDS PRU_2275 NC_014033.1 2745050 2746648 D identified by match to protein family HMM PF00251; family 32 glycosyl hydrolase 2745050..2746648 Prevotella ruminicola 23 9000500 YP_003575534.1 CDS PRU_2276 NC_014033.1 2746970 2748628 D identified by similarity to GB:AAA22924.1; match to protein family HMM PF00251; match to protein family HMM PF08244; fructan beta-(2,6)-fructosidase 2746970..2748628 Prevotella ruminicola 23 9002506 YP_003575535.1 CDS PRU_2277 NC_014033.1 2748659 2749810 D identified by similarity to SP:Q44623; match to protein family HMM PF07690; fucose:hydrogen symporter (FHS) family sugar transporter 2748659..2749810 Prevotella ruminicola 23 9001748 YP_003575536.1 CDS PRU_2278 NC_014033.1 2749816 2750691 D identified by similarity to SP:P26984; match to protein family HMM PF00294; fructokinase 2749816..2750691 Prevotella ruminicola 23 9001683 YP_003575537.1 CDS pckA NC_014033.1 2750905 2752518 D identified by similarity to SP:P22259; match to protein family HMM PF01293; match to protein family HMM TIGR00224; phosphoenolpyruvate carboxykinase (ATP) 2750905..2752518 Prevotella ruminicola 23 9000375 YP_003575538.1 CDS PRU_2280 NC_014033.1 2752956 2754140 D identified by match to protein family HMM PF02012; BNR/Asp-box repeat domain-containing protein 2752956..2754140 Prevotella ruminicola 23 9002232 YP_003575539.1 CDS PRU_2281 NC_014033.1 2754143 2754799 D identified by similarity to GB:AAQ65423.1; hypothetical protein 2754143..2754799 Prevotella ruminicola 23 9000248 YP_003575540.1 CDS uppS NC_014033.1 2754805 2755548 D identified by similarity to SP:P60472; match to protein family HMM PF01255; match to protein family HMM TIGR00055; di-trans,poly-cis-decaprenylcistransferase 2754805..2755548 Prevotella ruminicola 23 9002207 YP_003575541.1 CDS PRU_2283 NC_014033.1 2755581 2758283 D identified by match to protein family HMM PF01103; match to protein family HMM PF07244; OMP85 family outer membrane protein 2755581..2758283 Prevotella ruminicola 23 9001921 YP_003575542.1 CDS PRU_2284 NC_014033.1 2758295 2758810 D identified by match to protein family HMM PF03938; OmpH/HlpA family protein 2758295..2758810 Prevotella ruminicola 23 9001308 YP_003575543.1 CDS PRU_2285 NC_014033.1 2758859 2759362 D identified by match to protein family HMM PF03938; OmpH/HlpA family protein 2758859..2759362 Prevotella ruminicola 23 9000142 YP_003575544.1 CDS PRU_2286 NC_014033.1 2759394 2759909 D identified by similarity to GB:CAE79375.1; match to protein family HMM PF03938; hypothetical protein 2759394..2759909 Prevotella ruminicola 23 9002301 YP_003575545.1 CDS murI NC_014033.1 2759896 2760729 D identified by similarity to SP:P48797; match to protein family HMM PF01177; match to protein family HMM TIGR00067; glutamate racemase 2759896..2760729 Prevotella ruminicola 23 9002297 YP_003575546.1 CDS xerD NC_014033.1 2760716 2761627 R identified by match to protein family HMM PF00589; match to protein family HMM PF02899; tyrosine recombinase XerD complement(2760716..2761627) Prevotella ruminicola 23 9001694 YP_003575547.1 CDS aroQ NC_014033.1 2761719 2762135 D identified by similarity to SP:Q48255; match to protein family HMM PF01220; match to protein family HMM TIGR01088; 3-dehydroquinate dehydratase, type II 2761719..2762135 Prevotella ruminicola 23 9000431 YP_003575548.1 CDS PRU_2290 NC_014033.1 2762132 2762764 D identified by match to protein family HMM PF01596; O-methyltransferase family protein 2762132..2762764 Prevotella ruminicola 23 9002632 YP_003575549.1 CDS rbfA NC_014033.1 2762781 2763116 D identified by match to protein family HMM PF02033; match to protein family HMM TIGR00082; ribosome-binding factor A 2762781..2763116 Prevotella ruminicola 23 9001923 YP_003575550.1 CDS PRU_2292 NC_014033.1 2763121 2764350 D identified by match to protein family HMM PF02687; permease 2763121..2764350 Prevotella ruminicola 23 9001289 YP_003575551.1 CDS PRU_2293 NC_014033.1 2764415 2767270 D identified by match to protein family HMM PF00675; match to protein family HMM PF05193; M16 family peptidase 2764415..2767270 Prevotella ruminicola 23 9002417 YP_003575552.1 CDS metK NC_014033.1 2767304 2768560 D identified by similarity to SP:P54419; match to protein family HMM PF00438; match to protein family HMM PF02772; match to protein family HMM PF02773; match to protein family HMM TIGR01034; methionine adenosyltransferase 2767304..2768560 Prevotella ruminicola 23 9001801 YP_003575553.1 CDS PRU_2295 NC_014033.1 2768567 2769583 D identified by similarity to GB:AAO78331.1; hypothetical protein 2768567..2769583 Prevotella ruminicola 23 9001267 YP_003575554.1 CDS hemD NC_014033.1 2769591 2770340 D identified by match to protein family HMM PF02602; uroporphyrinogen-III synthase 2769591..2770340 Prevotella ruminicola 23 9000624 YP_003575555.1 CDS rnpA NC_014033.1 2770347 2770739 D identified by similarity to SP:P58031; match to protein family HMM TIGR00188; ribonuclease P protein component 2770347..2770739 Prevotella ruminicola 23 9000903 YP_003575556.1 CDS PRU_2298 NC_014033.1 2770736 2770966 D identified by similarity to SP:Q7MXI5; match to protein family HMM PF01809; match to protein family HMM TIGR00278; hypothetical protein 2770736..2770966 Prevotella ruminicola 23 9000300 YP_003575557.1 CDS tyrS NC_014033.1 2771003 2772298 D identified by similarity to SP:P22326; match to protein family HMM PF00579; match to protein family HMM PF01479; match to protein family HMM TIGR00234; tyrosine--tRNA ligase 2771003..2772298 Prevotella ruminicola 23 9002442 YP_003575558.1 CDS idnO NC_014033.1 2772464 2773267 D identified by similarity to SP:P39345; match to protein family HMM PF00106; gluconate 5-dehydrogenase 2772464..2773267 Prevotella ruminicola 23 9002821 YP_003575559.1 CDS PRU_2302 NC_014033.1 2773340 2773612 R identified by match to protein family HMM PF00216; HU family DNA-binding protein complement(2773340..2773612) Prevotella ruminicola 23 9002002 YP_003575560.1 CDS PRU_2303 NC_014033.1 2773858 2774805 D identified by match to protein family HMM PF01694; rhomboid family protein 2773858..2774805 Prevotella ruminicola 23 9001033 YP_003575561.1 CDS PRU_2304 NC_014033.1 2774802 2775896 D identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein 2774802..2775896 Prevotella ruminicola 23 9000063 YP_003575562.1 CDS secDF NC_014033.1 2776011 2779043 D identified by match to protein family HMM PF02355; match to protein family HMM PF07549; match to protein family HMM TIGR00916; match to protein family HMM TIGR00966; match to protein family HMM TIGR01129; protein-export membrane protein SecDF 2776011..2779043 Prevotella ruminicola 23 9000826 YP_003575563.1 CDS PRU_2307 NC_014033.1 2779223 2782033 R identified by similarity to GB:BAA78557.1; similarity to GB:BAC87941.1; match to protein family HMM PF04616; polygalacturonase/beta-xylosidase complement(2779223..2782033) Prevotella ruminicola 23 9002788 YP_003575564.1 CDS PRU_2308 NC_014033.1 2782135 2784168 D glycosyl hydrolase 2782135..2784168 Prevotella ruminicola 23 9002730 YP_003575565.1 CDS PRU_2309 NC_014033.1 2784187 2785392 R identified by match to protein family HMM PF00155; class I/II aminotransferase complement(2784187..2785392) Prevotella ruminicola 23 9001958 YP_003575566.1 CDS PRU_2310 NC_014033.1 2785389 2786234 R identified by similarity to GB:CAD65096.1; hypothetical protein complement(2785389..2786234) Prevotella ruminicola 23 9002680 YP_003575567.1 CDS PRU_2311 NC_014033.1 2786352 2786747 R identified by glimmer; hypothetical protein complement(2786352..2786747) Prevotella ruminicola 23 9000348 YP_003575568.1 CDS PRU_2312 NC_014033.1 2786868 2789216 R identified by match to protein family HMM PF00933; match to protein family HMM PF01915; family 3 glycosyl hydrolase complement(2786868..2789216) Prevotella ruminicola 23 9001161 YP_003575569.1 CDS PRU_2313 NC_014033.1 2789238 2791052 R identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; family 2 glycosyl hydrolase complement(2789238..2791052) Prevotella ruminicola 23 9000887 YP_003575570.1 CDS PRU_2314 NC_014033.1 2791061 2792998 R identified by similarity to GB:AAC44671.1; alpha-glucosidase family protein complement(2791061..2792998) Prevotella ruminicola 23 9001697 YP_003575571.1 CDS PRU_2315 NC_014033.1 2794584 2795183 R lipoprotein complement(2794584..2795183) Prevotella ruminicola 23 9000401 YP_003575572.1 CDS PRU_2316 NC_014033.1 2795401 2798373 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB dependent receptor 2795401..2798373 Prevotella ruminicola 23 9001038 YP_003575573.1 CDS PRU_2317 NC_014033.1 2798375 2799589 D lipoprotein 2798375..2799589 Prevotella ruminicola 23 9000917 YP_003575574.1 CDS PRU_2318 NC_014033.1 2799607 2800857 D identified by glimmer; hypothetical protein 2799607..2800857 Prevotella ruminicola 23 9001543 YP_003575575.1 CDS PRU_2319 NC_014033.1 2800900 2802195 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 2800900..2802195 Prevotella ruminicola 23 9002650 YP_003575576.1 CDS PRU_2320 NC_014033.1 2802192 2802893 D identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator 2802192..2802893 Prevotella ruminicola 23 9000645 YP_003575577.1 CDS PRU_2321 NC_014033.1 2802908 2803726 R identified by glimmer; hypothetical protein complement(2802908..2803726) Prevotella ruminicola 23 9000746 YP_003575578.1 CDS phyA NC_014033.1 2803793 2804782 R identified by similarity to GB:AAB88217.1; hemolysin A complement(2803793..2804782) Prevotella ruminicola 23 9001888 YP_003575579.1 CDS PRU_2323 NC_014033.1 2804802 2805626 R identified by similarity to GB:AAQ66862.1; hypothetical protein complement(2804802..2805626) Prevotella ruminicola 23 9001249 YP_003575580.1 CDS PRU_2324 NC_014033.1 2805840 2806295 D identified by match to protein family HMM PF02381; mraZ protein 2805840..2806295 Prevotella ruminicola 23 9001863 YP_003575581.1 CDS mraW NC_014033.1 2806292 2807206 D identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW 2806292..2807206 Prevotella ruminicola 23 9000341 YP_003575582.1 CDS PRU_2326 NC_014033.1 2807215 2807652 D identified by similarity to GB:AAO78560.1; hypothetical protein 2807215..2807652 Prevotella ruminicola 23 9002356 YP_003575583.1 CDS pbpB NC_014033.1 2807689 2809785 D identified by similarity to SP:Q07868; match to protein family HMM PF00905; match to protein family HMM PF03793; penicillin-binding protein 2807689..2809785 Prevotella ruminicola 23 9001590 YP_003575584.1 CDS murE NC_014033.1 2809809 2811260 D identified by similarity to SP:Q03523; match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01085; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 2809809..2811260 Prevotella ruminicola 23 9000806 YP_003575585.1 CDS mraY NC_014033.1 2811272 2812543 D identified by similarity to GB:AAG22121.1; match to protein family HMM PF00953; match to protein family HMM TIGR00445; phospho-N-acetylmuramoyl-pentapeptide- transferase 2811272..2812543 Prevotella ruminicola 23 9000576 YP_003575586.1 CDS murD NC_014033.1 2812552 2813883 D identified by similarity to SP:Q03522; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01087; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase 2812552..2813883 Prevotella ruminicola 23 9000060 YP_003575587.1 CDS PRU_2331 NC_014033.1 2813887 2815125 D identified by match to protein family HMM PF01098; FtsW/RodA/SpoVE family cell cycle protein 2813887..2815125 Prevotella ruminicola 23 9001839 YP_003575588.1 CDS murG NC_014033.1 2815168 2816271 D identified by match to protein family HMM PF03033; match to protein family HMM PF04101; match to protein family HMM TIGR01133; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 2815168..2816271 Prevotella ruminicola 23 9001217 YP_003575589.1 CDS murC NC_014033.1 2816303 2817676 D identified by similarity to GB:AAF14862.1; match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01082; UDP-N-acetylmuramate--L-alanine ligase 2816303..2817676 Prevotella ruminicola 23 9001067 YP_003575590.1 CDS PRU_2334 NC_014033.1 2817695 2818450 D annotation based on presence in a gene cluster; identified by similarity to GB:BAD47053.1; cell division protein 2817695..2818450 Prevotella ruminicola 23 9001009 YP_003575591.1 CDS ftsA NC_014033.1 2818455 2819909 D identified by match to protein family HMM PF02491; match to protein family HMM TIGR01174; cell division protein FtsA 2818455..2819909 Prevotella ruminicola 23 9000406 YP_003575592.1 CDS ftsZ_3 NC_014033.1 2819925 2821265 D identified by similarity to SP:P06138; match to protein family HMM PF00091; match to protein family HMM PF03953; match to protein family HMM TIGR00065; cell division protein FtsZ 2819925..2821265 Prevotella ruminicola 23 9002056 YP_003575593.1 CDS PRU_2337 NC_014033.1 2821276 2822001 R identified by match to protein family HMM PF02565; match to protein family HMM TIGR00613; DNA repair protein RecO complement(2821276..2822001) Prevotella ruminicola 23 9000159 YP_003575594.1 CDS rpsT NC_014033.1 2822332 2822586 D identified by similarity to SP:P21477; match to protein family HMM PF01649; match to protein family HMM TIGR00029; 30S ribosomal protein S20 2822332..2822586 Prevotella ruminicola 23 9002819 YP_003575595.1 CDS gyrB NC_014033.1 2822746 2824722 D identified by match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF01751; match to protein family HMM PF02518; match to protein family HMM TIGR01059; DNA gyrase subunit B 2822746..2824722 Prevotella ruminicola 23 9002336 YP_003575596.1 CDS PRU_2341 NC_014033.1 2824933 2825919 R identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein complement(2824933..2825919) Prevotella ruminicola 23 9000056 YP_003575597.1 CDS PRU_2342 NC_014033.1 2825916 2827127 R identified by similarity to SP:P52230; match to protein family HMM PF00578; match to protein family HMM PF08534; thioredoxin domain-containing protein complement(2825916..2827127) Prevotella ruminicola 23 9000817 YP_003575598.1 CDS PRU_2343 NC_014033.1 2827278 2829776 R identified by similarity to GB:AAQ65640.1; match to protein family HMM PF00593; hypothetical protein complement(2827278..2829776) Prevotella ruminicola 23 9001507 YP_003575599.1 CDS PRU_2344 NC_014033.1 2829773 2830636 R identified by match to protein family HMM PF09697; hypothetical protein complement(2829773..2830636) Prevotella ruminicola 23 9000708 YP_003575600.1 CDS PRU_2345 NC_014033.1 2831121 2831921 R identified by similarity to GB:AAQ66890.1; match to protein family HMM PF09697; hypothetical protein complement(2831121..2831921) Prevotella ruminicola 23 9000129 YP_003575601.1 CDS PRU_2346 NC_014033.1 2832043 2833602 R identified by similarity to GB:AAO75870.1; hypothetical protein complement(2832043..2833602) Prevotella ruminicola 23 9002566 YP_003575602.1 CDS PRU_2347 NC_014033.1 2833642 2835546 R identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase complement(2833642..2835546) Prevotella ruminicola 23 9001983 YP_003575603.1 CDS PRU_2348 NC_014033.1 2835539 2836891 R identified by similarity to SP:P54576; match to protein family HMM PF00672; match to protein family HMM PF02743; methyl-accepting chemotaxis protein complement(2835539..2836891) Prevotella ruminicola 23 9001021 YP_003575604.1 CDS buk NC_014033.1 2836910 2837980 R identified by similarity to SP:Q05619; match to protein family HMM PF00871; match to protein family HMM TIGR02707; butyrate kinase complement(2836910..2837980) Prevotella ruminicola 23 9002288 YP_003575605.1 CDS PRU_2350 NC_014033.1 2837980 2838816 R identified by similarity to SP:Q05624; match to protein family HMM PF01515; phosphate butyryltransferase complement(2837980..2838816) Prevotella ruminicola 23 9001714 YP_003575606.1 CDS PRU_2351 NC_014033.1 2838971 2841280 D identified by similarity to PIR:B83755; hypothetical protein 2838971..2841280 Prevotella ruminicola 23 9000699 YP_003575607.1 CDS PRU_2352 NC_014033.1 2841274 2842161 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 2841274..2842161 Prevotella ruminicola 23 9000082 YP_003575608.1 CDS PRU_2353 NC_014033.1 2842156 2842788 R identified by similarity to GB:AAQ65828.1; hypothetical protein complement(2842156..2842788) Prevotella ruminicola 23 9001602 YP_003575609.1 CDS ung NC_014033.1 2842823 2843488 R identified by match to protein family HMM PF03167; match to protein family HMM TIGR00628; uracil-DNA glycosylase complement(2842823..2843488) Prevotella ruminicola 23 9002358 YP_003575610.1 CDS gpmI NC_014033.1 2843585 2845105 R identified by similarity to SP:P37689; match to protein family HMM PF01676; match to protein family HMM PF06415; match to protein family HMM TIGR01307; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase complement(2843585..2845105) Prevotella ruminicola 23 9001565 YP_003575611.1 CDS PRU_2356 NC_014033.1 2845325 2845645 D identified by match to protein family HMM PF04993; TfoX N-terminal domain-containing protein 2845325..2845645 Prevotella ruminicola 23 9002712 YP_003575612.1 CDS PRU_2357 NC_014033.1 2845770 2845904 D identified by glimmer; hypothetical protein 2845770..2845904 Prevotella ruminicola 23 9001941 YP_003575613.1 CDS PRU_2358 NC_014033.1 2845970 2846113 R identified by glimmer; hypothetical protein complement(2845970..2846113) Prevotella ruminicola 23 9001167 YP_003575614.1 CDS PRU_2359 NC_014033.1 2846118 2850041 R CUB domain-containing protein complement(2846118..2850041) Prevotella ruminicola 23 9000381 YP_003575615.1 CDS PRU_2360 NC_014033.1 2850322 2851389 R hypothetical protein complement(2850322..2851389) Prevotella ruminicola 23 9002357 YP_003575616.1 CDS PRU_2361 NC_014033.1 2851654 2852034 R identified by match to protein family HMM PF02498; BRO domain-containing protein complement(2851654..2852034) Prevotella ruminicola 23 9002666 YP_003575617.1 CDS PRU_2362 NC_014033.1 2852354 2852884 D identified by match to protein family HMM TIGR01201; histone-like DNA-binding protein 2852354..2852884 Prevotella ruminicola 23 9001729 YP_003575618.1 CDS PRU_2363 NC_014033.1 2853358 2855079 D mannose-6-phosphate isomerase 2853358..2855079 Prevotella ruminicola 23 9000512 YP_003575619.1 CDS PRU_2364 NC_014033.1 2855216 2856205 D identified by match to protein family HMM PF00480; ROK family domain-containing protein 2855216..2856205 Prevotella ruminicola 23 9000773 YP_003575620.1 CDS PRU_2365 NC_014033.1 2856262 2858613 D identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; alpha-1,2-mannosidase family protein 2856262..2858613 Prevotella ruminicola 23 9000121 YP_003575621.1 CDS PRU_2366 NC_014033.1 2858647 2859825 D identified by similarity to SP:Q44623; match to protein family HMM PF07690; fucose:hydrogen symporter (FHS) family sugar transporter 2858647..2859825 Prevotella ruminicola 23 9000658 YP_003575622.1 CDS PRU_2368 NC_014033.1 2860551 2862314 D identified by similarity to SP:Q44879; match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; S41 family peptidase 2860551..2862314 Prevotella ruminicola 23 9002803 YP_003575623.1 CDS PRU_2369 NC_014033.1 2862425 2862892 D identified by similarity to SP:Q8A2A3; match to protein family HMM PF02576; hypothetical protein 2862425..2862892 Prevotella ruminicola 23 9002247 YP_003575624.1 CDS nusA NC_014033.1 2863004 2864230 D identified by match to protein family HMM PF00575; match to protein family HMM PF08529; match to protein family HMM TIGR01953; transcription termination factor NusA 2863004..2864230 Prevotella ruminicola 23 9002458 YP_003575625.1 CDS infB NC_014033.1 2864267 2867110 D identified by similarity to SP:P17889; match to protein family HMM PF00009; match to protein family HMM PF01926; match to protein family HMM PF03144; match to protein family HMM PF04760; match to protein family HMM TIGR00231; match to protein family HMM TIGR00487; translation initiation factor IF-2 2864267..2867110 Prevotella ruminicola 23 9000566 YP_003575626.1 CDS sufB NC_014033.1 2867113 2868561 D identified by similarity to SP:P77522; match to protein family HMM PF01458; match to protein family HMM TIGR01980; FeS assembly protein SufB 2867113..2868561 Prevotella ruminicola 23 9002132 YP_003575627.1 CDS PRU_2373 NC_014033.1 2868573 2869880 D identified by match to protein family HMM PF00860; match to protein family HMM PF00916; xanthine/uracil permease family protein 2868573..2869880 Prevotella ruminicola 23 9000048 YP_003575628.1 CDS sufC NC_014033.1 2869919 2870674 D identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978; FeS assembly ATPase SufC 2869919..2870674 Prevotella ruminicola 23 9001055 YP_003575629.1 CDS sufD NC_014033.1 2870674 2872029 D identified by match to protein family HMM PF01458; match to protein family HMM TIGR01981; FeS assembly protein SufD 2870674..2872029 Prevotella ruminicola 23 9001583 YP_003575630.1 CDS sufS NC_014033.1 2872039 2873280 D identified by match to protein family HMM PF00155; match to protein family HMM PF00266; match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01979; cysteine desulfurase SufS 2872039..2873280 Prevotella ruminicola 23 9000398 YP_003575631.1 CDS PRU_2377 NC_014033.1 2873289 2874914 R identified by similarity to GB:BAB83765.1; match to protein family HMM PF02065; match to protein family HMM PF03422; alpha-galactosidase/carbohydrate binding protein complement(2873289..2874914) Prevotella ruminicola 23 9001113 YP_003575632.1 CDS rnhB NC_014033.1 2875112 2875741 D identified by similarity to SP:P10442; match to protein family HMM PF01351; ribonuclease HII 2875112..2875741 Prevotella ruminicola 23 9001916 YP_003575633.1 CDS PRU_2379 NC_014033.1 2875802 2876290 D identified by similarity to SP:Q97DZ9; hypothetical protein 2875802..2876290 Prevotella ruminicola 23 9002300 YP_003575634.1 CDS PRU_2380 NC_014033.1 2876293 2877198 R identified by match to protein family HMM PF00892; match to protein family HMM PF03151; hypothetical protein complement(2876293..2877198) Prevotella ruminicola 23 9000294 YP_003575635.1 CDS PRU_2381 NC_014033.1 2877365 2877847 D lipoprotein 2877365..2877847 Prevotella ruminicola 23 9001475 YP_003575636.1 CDS PRU_2382 NC_014033.1 2877847 2878932 D identified by match to protein family HMM PF04055; Fe-S oxidoreductase 2877847..2878932 Prevotella ruminicola 23 9002126 YP_003575637.1 CDS murQ NC_014033.1 2879107 2879919 R identified by match to protein family HMM PF01380; match to protein family HMM TIGR00274; N-acetylmuramic acid 6-phosphate etherase complement(2879107..2879919) Prevotella ruminicola 23 9000297 YP_003575638.1 CDS PRU_2384 NC_014033.1 2879927 2880721 R identified by match to protein family HMM PF00722; family 16 glycosyl hydrolase complement(2879927..2880721) Prevotella ruminicola 23 9001764 YP_003575639.1 CDS PRU_2385 NC_014033.1 2880726 2881124 R identified by similarity to GB:AAO78177.1; match to protein family HMM PF03061; match to protein family HMM TIGR00051; hypothetical protein complement(2880726..2881124) Prevotella ruminicola 23 9000271 YP_003575640.1 CDS PRU_2386 NC_014033.1 2881121 2881813 R identified by match to protein family HMM PF00702; haloacid dehalogenase family hydrolase complement(2881121..2881813) Prevotella ruminicola 23 9000525 YP_003575641.1 CDS PRU_2387 NC_014033.1 2881810 2882226 R transcriptional regulator complement(2881810..2882226) Prevotella ruminicola 23 9001181 YP_003575642.1 CDS PRU_2388 NC_014033.1 2882257 2883798 R identified by match to protein family HMM PF01078; match to protein family HMM PF07728; match to protein family HMM TIGR00368; Mg-chelatase subunits D/I family, ComM subfamily protein complement(2882257..2883798) Prevotella ruminicola 23 9001306 YP_003575643.1 CDS PRU_2389 NC_014033.1 2883801 2884802 R identified by similarity to GB:AAO77951.1; match to protein family HMM PF00578; lipoprotein complement(2883801..2884802) Prevotella ruminicola 23 9001861 YP_003575644.1 CDS PRU_2390 NC_014033.1 2884806 2886467 R identified by match to protein family HMM PF00515; hypothetical protein complement(2884806..2886467) Prevotella ruminicola 23 9001006 YP_003575645.1 CDS PRU_2392 NC_014033.1 2886640 2887188 R lipoprotein complement(2886640..2887188) Prevotella ruminicola 23 9002796 YP_003575646.1 CDS argH NC_014033.1 2887185 2888516 R identified by similarity to SP:P11447; match to protein family HMM PF00206; match to protein family HMM TIGR00838; argininosuccinate lyase complement(2887185..2888516) Prevotella ruminicola 23 9000053 YP_003575647.1 CDS PRU_2394 NC_014033.1 2888539 2888931 R identified by similarity to GB:AAO78837.1; hypothetical protein complement(2888539..2888931) Prevotella ruminicola 23 9001999 YP_003575648.1 CDS pyrE NC_014033.1 2889021 2889653 R identified by similarity to SP:P25972; match to protein family HMM PF00156; match to protein family HMM TIGR00336; orotate phosphoribosyltransferase complement(2889021..2889653) Prevotella ruminicola 23 9000597 YP_003575649.1 CDS PRU_2396 NC_014033.1 2889716 2890414 R ComF family protein complement(2889716..2890414) Prevotella ruminicola 23 9001222 YP_003575650.1 CDS PRU_2397 NC_014033.1 2890401 2890892 R identified by match to protein family HMM PF02631; regulatory protein RecX complement(2890401..2890892) Prevotella ruminicola 23 9001827 YP_003575651.1 CDS PRU_2398 NC_014033.1 2890889 2891764 R identified by match to protein family HMM PF05175; match to protein family HMM PF08242; match to protein family HMM TIGR00536; match to protein family HMM TIGR03534; modification methylase, HemK family complement(2890889..2891764) Prevotella ruminicola 23 9002457 YP_003575652.1 CDS ribD NC_014033.1 2891804 2892727 D identified by match to protein family HMM PF00383; match to protein family HMM PF01872; match to protein family HMM TIGR00326; riboflavin biosynthesis protein RibD 2891804..2892727 Prevotella ruminicola 23 9000503 YP_003575653.1 CDS PRU_2400 NC_014033.1 2892728 2893582 R identified by similarity to GB:AAO78497.1; similarity to GB:CAD76029.1; match to protein family HMM PF04480; hypothetical protein complement(2892728..2893582) Prevotella ruminicola 23 9001292 YP_003575654.1 CDS argS NC_014033.1 2893634 2895418 R identified by match to protein family HMM PF00750; match to protein family HMM PF03485; match to protein family HMM PF05746; match to protein family HMM TIGR00456; arginine--tRNA ligase complement(2893634..2895418) Prevotella ruminicola 23 9001763 YP_003575655.1 CDS PRU_2402 NC_014033.1 2895562 2896512 D identified by match to protein family HMM PF09084; hypothetical protein 2895562..2896512 Prevotella ruminicola 23 9002559 YP_003575656.1 CDS PRU_2403 NC_014033.1 2896509 2899532 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 2896509..2899532 Prevotella ruminicola 23 9001395 YP_003575657.1 CDS PRU_2404 NC_014033.1 2899533 2900321 R identified by match to protein family HMM PF00702; match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR00099; match to protein family HMM TIGR01484; Cof-like hydrolase complement(2899533..2900321) Prevotella ruminicola 23 9002143 YP_003575658.1 CDS PRU_2405 NC_014033.1 2900328 2901203 R identified by match to protein family HMM PF00892; hypothetical protein complement(2900328..2901203) Prevotella ruminicola 23 9000518 YP_003575659.1 CDS agcS NC_014033.1 2901203 2902630 R identified by match to protein family HMM PF01235; match to protein family HMM TIGR00835; amino acid carrier protein complement(2901203..2902630) Prevotella ruminicola 23 9001312 YP_003575660.1 CDS PRU_2407 NC_014033.1 2902651 2904165 R identified by match to protein family HMM PF03600; divalent anion:sodium symporter (DASS) family transporter complement(2902651..2904165) Prevotella ruminicola 23 9001015 YP_003575661.1 CDS PRU_2408 NC_014033.1 2904297 2905193 D identified by match to protein family HMM PF00892; hypothetical protein 2904297..2905193 Prevotella ruminicola 23 9001794 YP_003575662.1 CDS bcp NC_014033.1 2905182 2905640 R identified by match to protein family HMM PF00578; match to protein family HMM PF08534; thioredoxin-dependent thiol peroxidase Bcp complement(2905182..2905640) Prevotella ruminicola 23 9000970 YP_003575663.1 CDS PRU_2410 NC_014033.1 2905660 2907063 R identified by similarity to GB:AAO91005.1; hypothetical protein complement(2905660..2907063) Prevotella ruminicola 23 9000190 YP_003575664.1 CDS PRU_2411 NC_014033.1 2907538 2909532 D identified by glimmer; hypothetical protein 2907538..2909532 Prevotella ruminicola 23 9002444 YP_003575665.1 CDS PRU_2412 NC_014033.1 2909709 2910830 D identified by match to protein family HMM PF01637; ATPase 2909709..2910830 Prevotella ruminicola 23 9002324 YP_003575666.1 CDS PRU_2413 NC_014033.1 2910863 2911123 D identified by similarity to GB:AAL29909.1; hypothetical protein 2910863..2911123 Prevotella ruminicola 23 9001355 YP_003575667.1 CDS PRU_2414 NC_014033.1 2911135 2911821 R identified by match to protein family HMM PF00072; match to protein family HMM PF00486; DNA-binding response regulator complement(2911135..2911821) Prevotella ruminicola 23 9000560 YP_003575668.1 CDS PRU_2415 NC_014033.1 2911808 2913313 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(2911808..2913313) Prevotella ruminicola 23 9001608 YP_003575669.1 CDS PRU_2416 NC_014033.1 2913515 2914357 D identified by similarity to GB:AAQ66890.1; match to protein family HMM PF09697; hypothetical protein 2913515..2914357 Prevotella ruminicola 23 9002151 YP_003575670.1 CDS PRU_2417 NC_014033.1 2914364 2916916 D identified by similarity to GB:AAQ65640.1; hypothetical protein 2914364..2916916 Prevotella ruminicola 23 9000755 YP_003575671.1 CDS PRU_2418 NC_014033.1 2917567 2917908 D identified by match to protein family HMM PF05534; HicB family protein 2917567..2917908 Prevotella ruminicola 23 9001701 YP_003575672.1 CDS PRU_2420 NC_014033.1 2918471 2919769 D identified by similarity to GB:AAO10574.1; match to protein family HMM PF07804; match to protein family HMM PF07805; HipA domain-containing protein 2918471..2919769 Prevotella ruminicola 23 9002231 YP_003575673.1 CDS PRU_2422 NC_014033.1 2920507 2921631 R identified by match to protein family HMM PF01844; match to protein family HMM PF03235; HNH endonuclease complement(2920507..2921631) Prevotella ruminicola 23 9001333 YP_003575674.1 CDS PRU_2423 NC_014033.1 2921631 2922746 R identified by similarity to SP:P00472; modification methylase complement(2921631..2922746) Prevotella ruminicola 23 9001539 YP_003575675.1 CDS PRU_2424 NC_014033.1 2923216 2923674 D identified by similarity to GB:AAC38412.1; hypothetical protein 2923216..2923674 Prevotella ruminicola 23 9002371 YP_003575676.1 CDS PRU_2425 NC_014033.1 2923819 2925210 D identified by similarity to GB:AAO75389.1; hypothetical protein 2923819..2925210 Prevotella ruminicola 23 9000340 YP_003575677.1 CDS PRU_2427 NC_014033.1 2925714 2926265 D identified by similarity to GB:AAO77645.1; hypothetical protein 2925714..2926265 Prevotella ruminicola 23 9001604 YP_003575678.1 CDS PRU_2428 NC_014033.1 2926379 2926804 D identified by similarity to SP:P00806; match to protein family HMM PF01510; N-acetylmuramoyl-L-alanine amidase 2926379..2926804 Prevotella ruminicola 23 9000476 YP_003575679.1 CDS PRU_2429 NC_014033.1 2926966 2927436 D identified by match to protein family HMM PF07883; cupin domain-containing protein 2926966..2927436 Prevotella ruminicola 23 9002482 YP_003575680.1 CDS PRU_2430 NC_014033.1 2927515 2928150 R identified by similarity to GB:AAO77200.1; hypothetical protein complement(2927515..2928150) Prevotella ruminicola 23 9002189 YP_003575681.1 CDS PRU_2431 NC_014033.1 2928235 2928993 R identified by similarity to GB:AAO42601.1; match to protein family HMM TIGR00384; succinate dehydrogenase/fumarate reductase iron-sulfur protein complement(2928235..2928993) Prevotella ruminicola 23 9001420 YP_003575682.1 CDS PRU_2432 NC_014033.1 2928999 2930978 R identified by similarity to GB:AAO42600.1; match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM TIGR01811; succinate dehydrogenase/fumarate reductase flavoprotein subunit complement(2928999..2930978) Prevotella ruminicola 23 9001314 YP_003575683.1 CDS PRU_2433 NC_014033.1 2931022 2931711 R identified by similarity to GB:AAO42599.1; match to protein family HMM TIGR02046; succinate dehydrogenase/fumarate reductase cytochrome b subunit complement(2931022..2931711) Prevotella ruminicola 23 9000520 YP_003575684.1 CDS PRU_2434 NC_014033.1 2931925 2932401 D identified by similarity to SP:O05404; match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; ECF family RNA polymerase sigma-70 factor 2931925..2932401 Prevotella ruminicola 23 9000558 YP_003575685.1 CDS PRU_2435 NC_014033.1 2932493 2933041 D identified by glimmer; hypothetical protein 2932493..2933041 Prevotella ruminicola 23 9002554 YP_003575686.1 CDS PRU_2436 NC_014033.1 2933038 2935956 R identified by match to protein family HMM PF00165; match to protein family HMM PF07494; match to protein family HMM PF07495; AraC family transcriptional regulator complement(2933038..2935956) Prevotella ruminicola 23 9001767 YP_003575687.1 CDS PRU_2437 NC_014033.1 2936122 2938242 D family 43 glycosyl hydrolase 2936122..2938242 Prevotella ruminicola 23 9001918 YP_003575688.1 CDS PRU_2438 NC_014033.1 2938453 2941668 D identified by similarity to GB:AAA95938.1; match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane protein 2938453..2941668 Prevotella ruminicola 23 9002295 YP_003575689.1 CDS PRU_2439 NC_014033.1 2941682 2943712 D lipoprotein 2941682..2943712 Prevotella ruminicola 23 9000450 YP_003575690.1 CDS PRU_2440 NC_014033.1 2943870 2944985 D identified by match to protein family HMM PF07470; family 88 glycosyl hydrolase 2943870..2944985 Prevotella ruminicola 23 9000681 YP_003575691.1 CDS PRU_2441 NC_014033.1 2945072 2946727 D identified by similarity to GB:AAO79515.1; match to protein family HMM PF07940; hypothetical protein 2945072..2946727 Prevotella ruminicola 23 9001653 YP_003575692.1 CDS PRU_2442 NC_014033.1 2946724 2947902 D identified by similarity to GB:BAD46822.1; hypothetical protein 2946724..2947902 Prevotella ruminicola 23 8999967 YP_003575693.1 CDS PRU_2443 NC_014033.1 2947899 2949161 D identified by similarity to PIR:H72299; hypothetical protein 2947899..2949161 Prevotella ruminicola 23 9000343 YP_003575694.1 CDS PRU_2444 NC_014033.1 2949252 2951201 R identified by match to protein family HMM PF07980; lipoprotein complement(2949252..2951201) Prevotella ruminicola 23 9001319 YP_003575695.1 CDS PRU_2445 NC_014033.1 2951226 2954273 R identified by similarity to GB:CAA10226.1; match to protein family HMM PF00593; match to protein family HMM PF07715; receptor antigen RagA complement(2951226..2954273) Prevotella ruminicola 23 9001554 YP_003575696.1 CDS PRU_2446 NC_014033.1 2954432 2958286 R identified by match to protein family HMM PF00072; match to protein family HMM PF00165; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF07494; match to protein family HMM PF07495; sensor histidine kinase/DNA-binding response regulator complement(2954432..2958286) Prevotella ruminicola 23 9001089 YP_003575697.1 CDS PRU_2447 NC_014033.1 2958311 2958913 R identified by similarity to GB:AAQ66970.1; match to protein family HMM PF08889; hypothetical protein complement(2958311..2958913) Prevotella ruminicola 23 9001730 YP_003575698.1 CDS lepB NC_014033.1 2958923 2960350 R identified by similarity to SP:P00803; match to protein family HMM TIGR02227; signal peptidase I complement(2958923..2960350) Prevotella ruminicola 23 9002486 YP_003575699.1 CDS dapB NC_014033.1 2960363 2961079 R identified by match to protein family HMM PF01113; match to protein family HMM PF03447; match to protein family HMM PF05173; match to protein family HMM TIGR00036; dihydrodipicolinate reductase complement(2960363..2961079) Prevotella ruminicola 23 9001002 YP_003575700.1 CDS panB NC_014033.1 2961229 2962080 D identified by match to protein family HMM PF02548; match to protein family HMM TIGR00222; 3-methyl-2-oxobutanoate hydroxymethyltransferase 2961229..2962080 Prevotella ruminicola 23 9001523 YP_003575701.1 CDS panC NC_014033.1 2962087 2962932 D identified by similarity to SP:P52998; match to protein family HMM PF02569; match to protein family HMM TIGR00018; match to protein family HMM TIGR00125; pantoate--beta-alanine ligase 2962087..2962932 Prevotella ruminicola 23 9002652 YP_003575702.1 CDS panD NC_014033.1 2962940 2963329 D identified by similarity to SP:P52999; match to protein family HMM PF02261; match to protein family HMM TIGR00223; aspartate 1-decarboxylase 2962940..2963329 Prevotella ruminicola 23 9001155 YP_003575703.1 CDS coaBC NC_014033.1 2963342 2964532 D identified by match to protein family HMM PF02441; match to protein family HMM PF04127; match to protein family HMM TIGR00521; phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase 2963342..2964532 Prevotella ruminicola 23 9001775 YP_003575704.1 CDS PRU_2454 NC_014033.1 2964536 2965294 D identified by match to protein family HMM PF03309; match to protein family HMM TIGR00671; transcriptional activator, Baf family 2964536..2965294 Prevotella ruminicola 23 9001622 YP_003575705.1 CDS PRU_2455 NC_014033.1 2965394 2965768 D identified by match to protein family HMM PF03965; BlaI/MecI/CopY family transcriptional regulator 2965394..2965768 Prevotella ruminicola 23 9002268 YP_003575706.1 CDS PRU_2456 NC_014033.1 2965768 2967126 D identified by similarity to GB:AAO75743.1; match to protein family HMM PF05569; hypothetical protein 2965768..2967126 Prevotella ruminicola 23 9000421 YP_003575707.1 CDS PRU_2457 NC_014033.1 2967566 2968255 D identified by similarity to PIR:H82000; match to protein family HMM PF07512; hypothetical protein 2967566..2968255 Prevotella ruminicola 23 9001099 YP_003575708.1 CDS PRU_2458 NC_014033.1 2969141 2969440 D identified by similarity to GB:AAO77610.1; hypothetical protein 2969141..2969440 Prevotella ruminicola 23 9002684 YP_003575709.1 CDS PRU_2459 NC_014033.1 2969542 2971959 R identified by similarity to GB:AAO76567.1; hypothetical protein complement(2969542..2971959) Prevotella ruminicola 23 9000498 YP_003575710.1 CDS PRU_2460 NC_014033.1 2972148 2972765 R identified by match to protein family HMM PF00302; chloramphenicol O-acetyltransferase complement(2972148..2972765) Prevotella ruminicola 23 9000070 YP_003575711.1 CDS PRU_2461 NC_014033.1 2972773 2975607 R identified by match to protein family HMM PF05193; M16 family peptidase complement(2972773..2975607) Prevotella ruminicola 23 9000799 YP_003575712.1 CDS PRU_2462 NC_014033.1 2975744 2976514 D identified by similarity to GB:AAO76785.1; match to protein family HMM PF01210; match to protein family HMM PF01408; match to protein family HMM PF03807; hypothetical protein 2975744..2976514 Prevotella ruminicola 23 9001439 YP_003575713.1 CDS dprA NC_014033.1 2976504 2977628 R identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732; DNA protecting protein DprA complement(2976504..2977628) Prevotella ruminicola 23 9001887 YP_003575714.1 CDS PRU_2464 NC_014033.1 2977635 2978930 R identified by similarity to GB:AAO78427.1; hypothetical protein complement(2977635..2978930) Prevotella ruminicola 23 9000732 YP_003575715.1 CDS PRU_2465 NC_014033.1 2979032 2979979 D identified by match to protein family HMM PF01180; match to protein family HMM PF01207; match to protein family HMM TIGR00737; hypothetical protein 2979032..2979979 Prevotella ruminicola 23 9000174 YP_003575716.1 CDS PRU_2466 NC_014033.1 2979997 2981127 R identified by match to protein family HMM PF00657; lipase/acylhydrolase complement(2979997..2981127) Prevotella ruminicola 23 9002330 YP_003575717.1 CDS PRU_2467 NC_014033.1 2981206 2981784 D identified by match to protein family HMM PF04011; LemA family protein 2981206..2981784 Prevotella ruminicola 23 9002529 YP_003575718.1 CDS ruvB NC_014033.1 2981865 2982902 D identified by match to protein family HMM PF00004; match to protein family HMM PF00308; match to protein family HMM PF05491; match to protein family HMM PF05496; match to protein family HMM PF07728; match to protein family HMM TIGR00635; Holliday junction DNA helicase RuvB 2981865..2982902 Prevotella ruminicola 23 9000877 YP_003575719.1 CDS coaD NC_014033.1 2982904 2983353 D identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR01510; pantetheine-phosphate adenylyltransferase 2982904..2983353 Prevotella ruminicola 23 9001345 YP_003575720.1 CDS PRU_2470 NC_014033.1 2983356 2983778 D identified by similarity to GB:AAQ65704.1; match to protein family HMM PF02130; match to protein family HMM TIGR00043; hypothetical protein 2983356..2983778 Prevotella ruminicola 23 9000825 YP_003575721.1 CDS PRU_2471 NC_014033.1 2983809 2984189 D identified by match to protein family HMM PF04205; FMN-binding protein 2983809..2984189 Prevotella ruminicola 23 8999998 YP_003575722.1 CDS PRU_2472 NC_014033.1 2984207 2985358 D identified by similarity to GB:AAO76584.1; hypothetical protein 2984207..2985358 Prevotella ruminicola 23 9001787 YP_003575723.1 CDS PRU_2473 NC_014033.1 2985362 2986522 D identified by similarity to GB:AAQ66209.1; hypothetical protein 2985362..2986522 Prevotella ruminicola 23 9001327 YP_003575724.1 CDS PRU_2474 NC_014033.1 2986593 2987747 D identified by similarity to GB:AAO78138.1; hypothetical protein 2986593..2987747 Prevotella ruminicola 23 9002289 YP_003575725.1 CDS PRU_2475 NC_014033.1 2987744 2989693 D identified by match to protein family HMM PF00204; match to protein family HMM PF01751; match to protein family HMM PF02518; type II topoisomerase family protein 2987744..2989693 Prevotella ruminicola 23 9001632 YP_003575726.1 CDS PRU_2476 NC_014033.1 2989686 2991587 D identified by match to protein family HMM PF00581; match to protein family HMM PF00595; match to protein family HMM PF03572; match to protein family HMM TIGR00225; S41 family peptidase 2989686..2991587 Prevotella ruminicola 23 9000672 YP_003575727.1 CDS gidA NC_014033.1 2991592 2993505 D identified by match to protein family HMM PF01134; match to protein family HMM TIGR00136; glucose-inhibited division protein A 2991592..2993505 Prevotella ruminicola 23 9000118 YP_003575728.1 CDS PRU_2478 NC_014033.1 2993556 2994083 D identified by match to protein family HMM PF00156; adenine phosphoribosyltransferase 2993556..2994083 Prevotella ruminicola 23 9002740 YP_003575729.1 CDS uvrC NC_014033.1 2994189 2996021 D identified by match to protein family HMM PF00633; match to protein family HMM PF01541; match to protein family HMM PF08459; match to protein family HMM TIGR00194; excinuclease ABC subunit C 2994189..2996021 Prevotella ruminicola 23 9000505 YP_003575730.1 CDS dtd NC_014033.1 2996345 2996797 D identified by match to protein family HMM PF02580; match to protein family HMM TIGR00256; D-tyrosyl-tRNA(Tyr) deacylase 2996345..2996797 Prevotella ruminicola 23 9000676 YP_003575731.1 CDS PRU_2481 NC_014033.1 2996801 2997049 D identified by glimmer; hypothetical protein 2996801..2997049 Prevotella ruminicola 23 9001462 YP_003575732.1 CDS PRU_2482 NC_014033.1 2997046 2997372 D identified by match to protein family HMM PF03819; MazG nucleotide pyrophosphohydrolase domain-containing protein 2997046..2997372 Prevotella ruminicola 23 9002261 YP_003575733.1 CDS deoC NC_014033.1 2997447 2998337 D identified by similarity to SP:P00882; match to protein family HMM PF01791; match to protein family HMM TIGR00126; deoxyribose-phosphate aldolase 2997447..2998337 Prevotella ruminicola 23 9000281 YP_003575734.1 CDS PRU_2484 NC_014033.1 2998452 2999426 R identified by match to protein family HMM PF00348; polyprenyl synthetase family protein complement(2998452..2999426) Prevotella ruminicola 23 9000320 YP_003575735.1 CDS polA NC_014033.1 2999514 3002279 D identified by match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF01612; match to protein family HMM PF02739; match to protein family HMM TIGR00593; DNA-directed DNA polymerase 2999514..3002279 Prevotella ruminicola 23 9001187 YP_003575736.1 CDS PRU_2486 NC_014033.1 3002280 3003941 R identified by match to protein family HMM PF00485; phosphoribulokinase/uridine kinase family protein complement(3002280..3003941) Prevotella ruminicola 23 9000318 YP_003575737.1 CDS PRU_2487 NC_014033.1 3004066 3005802 D identified by match to protein family HMM PF02690; phosphate:sodium symporter (PNaS) family transporter 3004066..3005802 Prevotella ruminicola 23 9001135 YP_003575738.1 CDS PRU_2488 NC_014033.1 3006098 3008449 D identified by similarity to GB:AAC27029.1; match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane receptor (OMR) family transporter 3006098..3008449 Prevotella ruminicola 23 9002021 YP_003575739.1 CDS PRU_2489 NC_014033.1 3008449 3009033 D identified by similarity to SP:P31215; match to protein family HMM PF04973; match to protein family HMM TIGR01528; nicotinamide mononucleotide transporter PnuC 3008449..3009033 Prevotella ruminicola 23 9001025 YP_003575740.1 CDS PRU_2490 NC_014033.1 3009113 3010921 D identified by match to protein family HMM PF00501; AMP-binding enzyme 3009113..3010921 Prevotella ruminicola 23 9000788 YP_003575741.1 CDS prfB NC_014033.1 3010927 3012051 D identified by similarity to SP:P28367; match to protein family HMM PF00472; match to protein family HMM PF03462; peptide chain release factor 2 3010927..3012051 Prevotella ruminicola 23 9001425 YP_003575742.1 CDS PRU_2492 NC_014033.1 3012080 3012238 D identified by glimmer; hypothetical protein 3012080..3012238 Prevotella ruminicola 23 9000627 YP_003575743.1 CDS PRU_2493 NC_014033.1 3012239 3012727 D identified by match to protein family HMM PF01928; adenylate cyclase 3012239..3012727 Prevotella ruminicola 23 9001285 YP_003575744.1 CDS PRU_2494 NC_014033.1 3012699 3013085 R identified by similarity to GB:AAO78748.1; hypothetical protein complement(3012699..3013085) Prevotella ruminicola 23 9001889 YP_003575745.1 CDS PRU_2495 NC_014033.1 3013167 3014531 D identified by match to protein family HMM PF00209; sodium-dependent symporter 3013167..3014531 Prevotella ruminicola 23 9000325 YP_003575746.1 CDS PRU_2496 NC_014033.1 3014532 3015884 D identified by match to protein family HMM PF00209; sodium-dependent symporter 3014532..3015884 Prevotella ruminicola 23 9000909 YP_003575747.1 CDS PRU_2497 NC_014033.1 3015881 3016765 D identified by similarity to GB:AAO78746.1; hypothetical protein 3015881..3016765 Prevotella ruminicola 23 9000291 YP_003575748.1 CDS tatA NC_014033.1 3016848 3017033 D identified by match to protein family HMM PF02416; match to protein family HMM TIGR01411; twin-arginine translocation protein TatA 3016848..3017033 Prevotella ruminicola 23 9001193 YP_003575749.1 CDS tatC NC_014033.1 3017044 3017772 D identified by match to protein family HMM PF00902; match to protein family HMM TIGR00945; Sec-independent protein translocase TatC 3017044..3017772 Prevotella ruminicola 23 9000517 YP_003575750.1 CDS PRU_2500 NC_014033.1 3017796 3019280 D identified by match to protein family HMM PF00037; iron-sulfur cluster-binding protein 3017796..3019280 Prevotella ruminicola 23 9002719 YP_003575751.1 CDS PRU_2501 NC_014033.1 3019293 3020699 D identified by match to protein family HMM PF00037; match to protein family HMM PF00248; match to protein family HMM TIGR01409; aldo/keto reductase family oxidoreductase 3019293..3020699 Prevotella ruminicola 23 9001040 YP_003575752.1 CDS ychF NC_014033.1 3020773 3021873 D identified by match to protein family HMM PF01926; match to protein family HMM PF06071; match to protein family HMM TIGR00092; GTP-binding protein YchF 3020773..3021873 Prevotella ruminicola 23 9000400 YP_003575753.1 CDS lgt NC_014033.1 3021870 3022724 D identified by match to protein family HMM PF01790; match to protein family HMM TIGR00544; prolipoprotein diacylglyceryl transferase 3021870..3022724 Prevotella ruminicola 23 9001502 YP_003575754.1 CDS mutS NC_014033.1 3022822 3025446 R identified by match to protein family HMM PF00488; match to protein family HMM PF01624; match to protein family HMM PF05188; match to protein family HMM PF05190; match to protein family HMM PF05192; match to protein family HMM TIGR01070; DNA mismatch repair protein MutS complement(3022822..3025446) Prevotella ruminicola 23 9000945 YP_003575755.1 CDS PRU_2505 NC_014033.1 3025526 3026518 D identified by match to protein family HMM PF02016; U61 family peptidase 3025526..3026518 Prevotella ruminicola 23 9000675 YP_003575756.1 CDS PRU_2506 NC_014033.1 3026976 3028946 D identified by similarity to SP:P06129; match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane receptor (OMR) family transporter 3026976..3028946 Prevotella ruminicola 23 9000108 YP_003575757.1 CDS PRU_2507 NC_014033.1 3029069 3030109 D identified by similarity to GB:AAO76597.1; hypothetical protein 3029069..3030109 Prevotella ruminicola 23 9002585 YP_003575758.1 CDS PRU_2508 NC_014033.1 3030106 3031224 D hypothetical protein 3030106..3031224 Prevotella ruminicola 23 9002453 YP_003575759.1 CDS PRU_2509 NC_014033.1 3031256 3031999 D lipoprotein 3031256..3031999 Prevotella ruminicola 23 9000789 YP_003575760.1 CDS PRU_2510 NC_014033.1 3031999 3033123 D identified by match to protein family HMM PF01497; ABC transporter periplasmic substrate-binding protein 3031999..3033123 Prevotella ruminicola 23 8999991 YP_003575761.1 CDS PRU_2511 NC_014033.1 3033113 3034147 R identified by match to protein family HMM PF00155; class I/II aminotransferase complement(3033113..3034147) Prevotella ruminicola 23 9002244 YP_003575762.1 CDS PRU_2512 NC_014033.1 3034163 3034960 R identified by similarity to SP:P07821; match to protein family HMM PF00005; iron compound ABC transporter ATP-binding protein complement(3034163..3034960) Prevotella ruminicola 23 9001643 YP_003575763.1 CDS PRU_2513 NC_014033.1 3035033 3035608 R identified by similarity to GB:AAO79666.1; match to protein family HMM PF02659; hypothetical protein complement(3035033..3035608) Prevotella ruminicola 23 9002466 YP_003575764.1 CDS PRU_2514 NC_014033.1 3035727 3037910 D identified by similarity to GB:AAD23585.1; match to protein family HMM PF02065; alpha-galactosidase 3035727..3037910 Prevotella ruminicola 23 9000287 YP_003575765.1 CDS PRU_2515 NC_014033.1 3037996 3040773 D identified by match to protein family HMM PF00165; match to protein family HMM PF07494; match to protein family HMM PF07495; AraC family transcriptional regulator 3037996..3040773 Prevotella ruminicola 23 9000451 YP_003575766.1 CDS PRU_2516 NC_014033.1 3040955 3042088 D identified by similarity to SP:P17901; match to protein family HMM PF00150; cellulase 3040955..3042088 Prevotella ruminicola 23 9002637 YP_003575767.1 CDS PRU_2517 NC_014033.1 3042131 3045304 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB dependent receptor 3042131..3045304 Prevotella ruminicola 23 9002629 YP_003575768.1 CDS PRU_2518 NC_014033.1 3045320 3047062 D lipoprotein 3045320..3047062 Prevotella ruminicola 23 9001581 YP_003575769.1 CDS PRU_2519 NC_014033.1 3047087 3048451 D identified by similarity to GB:AAC97595.1; polysaccharide hydrolase-like protein 3047087..3048451 Prevotella ruminicola 23 9001019 YP_003575770.1 CDS PRU_2520 NC_014033.1 3048950 3049999 R identified by similarity to GB:AAO78226.1; lipoprotein complement(3048950..3049999) Prevotella ruminicola 23 9000344 YP_003575771.1 CDS PRU_2521 NC_014033.1 3050109 3050852 R identified by match to protein family HMM PF02661; Fic family protein complement(3050109..3050852) Prevotella ruminicola 23 9002741 YP_003575772.1 CDS PRU_2522 NC_014033.1 3051972 3052526 D identified by glimmer; hypothetical protein 3051972..3052526 Prevotella ruminicola 23 9002153 YP_003575773.1 CDS PRU_2523 NC_014033.1 3052516 3054741 D protein kinase domain-containing protein 3052516..3054741 Prevotella ruminicola 23 9001438 YP_003575774.1 CDS PRU_2525 NC_014033.1 3055786 3057282 R identified by similarity to PIR:B97221; hypothetical protein complement(3055786..3057282) Prevotella ruminicola 23 9000876 YP_003575775.1 CDS PRU_2526 NC_014033.1 3057402 3058427 D identified by similarity to GB:BAC89753.1; hypothetical protein 3057402..3058427 Prevotella ruminicola 23 9002480 YP_003575776.1 CDS leuS NC_014033.1 3058528 3061350 D identified by similarity to SP:P36430; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00396; leucine--tRNA ligase 3058528..3061350 Prevotella ruminicola 23 9002052 YP_003575777.1 CDS PRU_2528 NC_014033.1 3062289 3062867 D identified by match to protein family HMM PF01725; match to protein family HMM TIGR00042; non-canonical purine NTP pyrophosphatase 3062289..3062867 Prevotella ruminicola 23 9002565 YP_003575778.1 CDS PRU_2529 NC_014033.1 3062871 3064775 D hypothetical protein 3062871..3064775 Prevotella ruminicola 23 9000601 YP_003575779.1 CDS nadA NC_014033.1 3064794 3065735 R identified by similarity to SP:O05104; match to protein family HMM PF02445; match to protein family HMM TIGR00550; quinolinate synthetase complex subunit A complement(3064794..3065735) Prevotella ruminicola 23 9001441 YP_003575780.1 CDS PRU_2531 NC_014033.1 3066153 3066683 D identified by match to protein family HMM PF00588; TrmH family RNA methyltransferase 3066153..3066683 Prevotella ruminicola 23 9002137 YP_003575781.1 CDS PRU_2532 NC_014033.1 3066758 3067435 D identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; ECF family RNA polymerase sigma-70 factor 3066758..3067435 Prevotella ruminicola 23 9000160 YP_003575782.1 CDS PRU_2533 NC_014033.1 3067480 3067887 D identified by similarity to GB:AAO75431.1; hypothetical protein 3067480..3067887 Prevotella ruminicola 23 9000954 YP_003575783.1 CDS PRU_2534 NC_014033.1 3067900 3068784 D identified by similarity to GB:AAO75430.1; hypothetical protein 3067900..3068784 Prevotella ruminicola 23 9001739 YP_003575784.1 CDS metG NC_014033.1 3068887 3070953 D identified by match to protein family HMM PF01588; match to protein family HMM PF09334; match to protein family HMM TIGR00398; match to protein family HMM TIGR00399; methionine--tRNA ligase 3068887..3070953 Prevotella ruminicola 23 9002539 YP_003575785.1 CDS PRU_2536 NC_014033.1 3070968 3072410 D identified by similarity to SP:O32273; match to protein family HMM PF01943; polysaccharide biosynthesis protein 3070968..3072410 Prevotella ruminicola 23 9000540 YP_003575786.1 CDS PRU_2537 NC_014033.1 3072414 3073136 D identified by similarity to GB:CAA55303.1; match to protein family HMM PF01128; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3072414..3073136 Prevotella ruminicola 23 9001344 YP_003575787.1 CDS PRU_2538 NC_014033.1 3073124 3074176 D identified by similarity to GB:AAK70882.1; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; polysaccharide biosynthesis protein 3073124..3074176 Prevotella ruminicola 23 9002352 YP_003575788.1 CDS PRU_2539 NC_014033.1 3074173 3074979 D identified by similarity to GB:AAD37094.1; match to protein family HMM PF04991; licD protein 3074173..3074979 Prevotella ruminicola 23 9001298 YP_003575789.1 CDS PRU_2540 NC_014033.1 3074976 3076001 D identified by similarity to PIR:AE2359; hypothetical protein 3074976..3076001 Prevotella ruminicola 23 9001728 YP_003575790.1 CDS PRU_2541 NC_014033.1 3076023 3077360 R hypothetical protein complement(3076023..3077360) Prevotella ruminicola 23 9002222 YP_003575791.1 CDS PRU_2542 NC_014033.1 3077423 3078007 R identified by match to protein family HMM TIGR01488; HAD-superfamily hydrolase complement(3077423..3078007) Prevotella ruminicola 23 9000479 YP_003575792.1 CDS PRU_2543 NC_014033.1 3078004 3078921 R acyltransferase family protein complement(3078004..3078921) Prevotella ruminicola 23 9000003 YP_003575793.1 CDS PRU_2544 NC_014033.1 3078984 3080009 R acyltransferase family protein complement(3078984..3080009) Prevotella ruminicola 23 9000698 YP_003575794.1 CDS PRU_2545 NC_014033.1 3080069 3081907 R identified by match to protein family HMM PF00884; sulfatase family protein complement(3080069..3081907) Prevotella ruminicola 23 9002561 YP_003575795.1 CDS nadD NC_014033.1 3081900 3082448 R identified by similarity to SP:P54455; match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR00482; nicotinate-nucleotide adenylyltransferase complement(3081900..3082448) Prevotella ruminicola 23 9002392 YP_003575796.1 CDS PRU_2547 NC_014033.1 3082445 3083023 R identified by match to protein family HMM PF00625; match to protein family HMM TIGR03263; guanylate kinase complement(3082445..3083023) Prevotella ruminicola 23 9002026 YP_003575797.1 CDS PRU_2548 NC_014033.1 3083027 3083902 R identified by similarity to GB:AAO77115.1; match to protein family HMM PF03755; match to protein family HMM PF08340; hypothetical protein complement(3083027..3083902) Prevotella ruminicola 23 9001867 YP_003575798.1 CDS PRU_2549 NC_014033.1 3084113 3085363 D identified by similarity to GB:AAO79849.1; match to protein family HMM PF00328; hypothetical protein 3084113..3085363 Prevotella ruminicola 23 9001265 YP_003575799.1 CDS hemE NC_014033.1 3085474 3086499 D identified by similarity to SP:P29680; match to protein family HMM PF01208; uroporphyrinogen decarboxylase 3085474..3086499 Prevotella ruminicola 23 9000230 YP_003575800.1 CDS PRU_2551 NC_014033.1 3086522 3088621 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; TonB dependent receptor 3086522..3088621 Prevotella ruminicola 23 9002405 YP_003575801.1 CDS PRU_2552 NC_014033.1 3088673 3089863 D identified by similarity to SP:P36670; match to protein family HMM PF07690; ampG protein 3088673..3089863 Prevotella ruminicola 23 9001477 YP_003575802.1 CDS PRU_2553 NC_014033.1 3089857 3090639 D identified by similarity to GB:AAM69034.1; hypothetical protein 3089857..3090639 Prevotella ruminicola 23 9000843 YP_003575803.1 CDS PRU_2554 NC_014033.1 3090642 3091421 R identified by similarity to GB:AAO78448.1; hypothetical protein complement(3090642..3091421) Prevotella ruminicola 23 9001247 YP_003575804.1 CDS PRU_2555 NC_014033.1 3091448 3093400 R identified by similarity to GB:AAO78447.1; lipoprotein complement(3091448..3093400) Prevotella ruminicola 23 9000622 YP_003575805.1 CDS PRU_2556 NC_014033.1 3093397 3094905 R identified by similarity to OMNI:PINA0575; match to protein family HMM PF03321; hypothetical protein complement(3093397..3094905) Prevotella ruminicola 23 9001363 YP_003575806.1 CDS PRU_2557 NC_014033.1 3094979 3096271 R identified by similarity to GB:AAO79826.1; hypothetical protein complement(3094979..3096271) Prevotella ruminicola 23 9001201 YP_003575807.1 CDS PRU_2558 NC_014033.1 3096268 3096816 R identified by similarity to SP:P37401; match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; ECF family RNA polymerase sigma-70 factor complement(3096268..3096816) Prevotella ruminicola 23 9002079 YP_003575808.1 CDS PRU_2559 NC_014033.1 3096960 3098303 D identified by match to protein family HMM PF00079; peptidase inhibitor 3096960..3098303 Prevotella ruminicola 23 9000249 YP_003575809.1 CDS rnc NC_014033.1 3098308 3099336 R identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191; ribonuclease III complement(3098308..3099336) Prevotella ruminicola 23 9000854 YP_003575810.1 CDS fabF NC_014033.1 3099326 3100588 R identified by similarity to SP:P73283; match to protein family HMM PF00109; match to protein family HMM PF02801; match to protein family HMM TIGR03150; 3-oxoacyl-[acyl-carrier-protein] synthase II complement(3099326..3100588) Prevotella ruminicola 23 9001005 YP_003575811.1 CDS acpP NC_014033.1 3100658 3100894 R identified by match to protein family HMM PF00550; match to protein family HMM TIGR00517; acyl carrier protein complement(3100658..3100894) Prevotella ruminicola 23 9001781 YP_003575812.1 CDS PRU_2563 NC_014033.1 3101175 3101780 D identified by similarity to GB:CAD76499.1; hypothetical protein 3101175..3101780 Prevotella ruminicola 23 9002491 YP_003575813.1 CDS PRU_2564 NC_014033.1 3101793 3102845 D identified by match to protein family HMM PF01075; glycosyl transferase family protein 3101793..3102845 Prevotella ruminicola 23 9000478 YP_003575814.1 CDS PRU_2565 NC_014033.1 3102860 3103015 D identified by similarity to SP:P00268; match to protein family HMM PF00301; rubredoxin 3102860..3103015 Prevotella ruminicola 23 9000475 YP_003575815.1 CDS PRU_2566 NC_014033.1 3103021 3104703 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 3103021..3104703 Prevotella ruminicola 23 9000913 YP_003575816.1 CDS PRU_2567 NC_014033.1 3104700 3106151 D identified by similarity to GB:AAN12763.1; hypothetical protein 3104700..3106151 Prevotella ruminicola 23 9001649 YP_003575817.1 CDS PRU_2568 NC_014033.1 3106517 3107527 R identified by match to protein family HMM PF01032; iron compound ABC transporter permease complement(3106517..3107527) Prevotella ruminicola 23 9001054 YP_003575818.1 CDS PRU_2569 NC_014033.1 3107736 3110111 D identified by similarity to GB:AAO78142.1; match to protein family HMM PF00593; hypothetical protein 3107736..3110111 Prevotella ruminicola 23 9000427 YP_003575819.1 CDS PRU_2570 NC_014033.1 3110212 3112512 D identified by similarity to GB:AAO76567.1; hypothetical protein 3110212..3112512 Prevotella ruminicola 23 9000584 YP_003575820.1 CDS PRU_2571 NC_014033.1 3112642 3113202 D identified by similarity to GB:CAF19206.1; hypothetical protein 3112642..3113202 Prevotella ruminicola 23 9000004 YP_003575821.1 CDS pepO_2 NC_014033.1 3113371 3115341 D identified by similarity to GB:BAA24495.1; match to protein family HMM PF01431; match to protein family HMM PF05649; endopeptidase PepO 3113371..3115341 Prevotella ruminicola 23 9002257 YP_003575822.1 CDS PRU_2573 NC_014033.1 3115335 3117482 D identified by similarity to GB:AAO78142.1; hypothetical protein 3115335..3117482 Prevotella ruminicola 23 9001654 YP_003575823.1 CDS PRU_2574 NC_014033.1 3117477 3118967 R identified by similarity to GB:AAO76901.1; match to protein family HMM PF04397; hypothetical protein complement(3117477..3118967) Prevotella ruminicola 23 9000356 YP_003575824.1 CDS PRU_2575 NC_014033.1 3119214 3120428 D identified by similarity to PIR:A97192; hypothetical protein 3119214..3120428 Prevotella ruminicola 23 9000572 YP_003575825.1 CDS PRU_2576 NC_014033.1 3120438 3120959 D identified by similarity to GB:AAO79610.1; hypothetical protein 3120438..3120959 Prevotella ruminicola 23 9000290 YP_003575826.1 CDS PRU_2577 NC_014033.1 3120987 3121556 D identified by match to protein family HMM PF02525; match to protein family HMM PF03358; FMN reductase, NADPH-dependent domain-containing protein 3120987..3121556 Prevotella ruminicola 23 9002431 YP_003575827.1 CDS PRU_2578 NC_014033.1 3121579 3122469 D identified by match to protein family HMM PF00583; GNAT family acetyltransferase 3121579..3122469 Prevotella ruminicola 23 9000969 YP_003575828.1 CDS PRU_2579 NC_014033.1 3122909 3123328 D identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase family protein 3122909..3123328 Prevotella ruminicola 23 9001349 YP_003575829.1 CDS PRU_2580 NC_014033.1 3123346 3123966 D identified by similarity to GB:AAT31984.1; hypothetical protein 3123346..3123966 Prevotella ruminicola 23 9000345 YP_003575830.1 CDS PRU_2581 NC_014033.1 3123966 3124982 D identified by match to protein family HMM PF00903; match to protein family HMM PF01965; DJ-1/PfpI family/glyoxalase family protein 3123966..3124982 Prevotella ruminicola 23 9002218 YP_003575831.1 CDS PRU_2582 NC_014033.1 3125383 3125922 D identified by match to protein family HMM PF00583; GNAT family acetyltransferase 3125383..3125922 Prevotella ruminicola 23 9001461 YP_003575832.1 CDS PRU_2583 NC_014033.1 3126055 3126756 D identified by similarity to GB:AAM05241.1; match to protein family HMM PF02525; match to protein family HMM PF03358; hypothetical protein 3126055..3126756 Prevotella ruminicola 23 9002158 YP_003575833.1 CDS PRU_2584 NC_014033.1 3126788 3127498 D identified by match to protein family HMM PF00756; esterase 3126788..3127498 Prevotella ruminicola 23 9000218 YP_003575834.1 CDS PRU_2585 NC_014033.1 3127529 3127987 D identified by match to protein family HMM PF00583; GNAT family acetyltransferase 3127529..3127987 Prevotella ruminicola 23 9002540 YP_003575835.1 CDS PRU_2586 NC_014033.1 3128311 3128784 D identified by match to protein family HMM PF00583; GNAT family acetyltransferase 3128311..3128784 Prevotella ruminicola 23 9001766 YP_003575836.1 CDS PRU_2587 NC_014033.1 3128796 3129917 D identified by match to protein family HMM PF04171; match to protein family HMM PF04235; hypothetical protein 3128796..3129917 Prevotella ruminicola 23 9000052 YP_003575837.1 CDS PRU_2588 NC_014033.1 3130076 3131026 R identified by match to protein family HMM PF04397; transcriptional regulator complement(3130076..3131026) Prevotella ruminicola 23 9000626 YP_003575838.1 CDS PRU_2589 NC_014033.1 3131230 3133551 D hypothetical protein 3131230..3133551 Prevotella ruminicola 23 9002251 YP_003575839.1 CDS PRU_2590 NC_014033.1 3133670 3136141 D identified by match to protein family HMM PF00933; match to protein family HMM PF01915; family 3 glycosyl hydrolase 3133670..3136141 Prevotella ruminicola 23 9001459 YP_003575840.1 CDS PRU_2591 NC_014033.1 3136131 3139355 R identified by match to protein family HMM PF00328; match to protein family HMM PF07971; match to protein family HMM TIGR01180; alpha-1,2-mannosidase family protein complement(3136131..3139355) Prevotella ruminicola 23 9000296 YP_003575841.1 CDS PRU_2592 NC_014033.1 3139368 3141209 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(3139368..3141209) Prevotella ruminicola 23 9001110 YP_003575842.1 CDS PRU_2593 NC_014033.1 3141206 3143818 R identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; alpha-1,2-mannosidase family protein complement(3141206..3143818) Prevotella ruminicola 23 9001988 YP_003575843.1 CDS PRU_2594 NC_014033.1 3143902 3144555 D identified by match to protein family HMM PF06508; match to protein family HMM TIGR00364; protein ExsB 3143902..3144555 Prevotella ruminicola 23 9000805 YP_003575844.1 CDS PRU_2595 NC_014033.1 3144557 3145786 D identified by match to protein family HMM PF00675; match to protein family HMM PF05193; M16 family peptidase 3144557..3145786 Prevotella ruminicola 23 8999994 YP_003575845.1 CDS PRU_2596 NC_014033.1 3145779 3146273 R identified by similarity to SP:O05409; match to protein family HMM PF04542; match to protein family HMM PF08281; match to protein family HMM TIGR02937; ECF family RNA polymerase sigma-70 factor complement(3145779..3146273) Prevotella ruminicola 23 9001972 YP_003575846.1 CDS PRU_2597 NC_014033.1 3146266 3147267 R identified by similarity to SP:P48791; similarity to SP:P49943; match to protein family HMM PF04616; xylan 1,4-beta-xylosidase/alpha-N-arabinofuranosidase complement(3146266..3147267) Prevotella ruminicola 23 9001178 YP_003575847.1 CDS PRU_2598 NC_014033.1 3147285 3148733 R identified by match to protein family HMM PF07690; match to protein family HMM TIGR00792; GPH family cation:sugar symporter complement(3147285..3148733) Prevotella ruminicola 23 9000366 YP_003575848.1 CDS PRU_2599 NC_014033.1 3148898 3150850 D identified by similarity to GB:AAM43324.1; match to protein family HMM PF03629; sialic acid-specific 9-O-acetylesterase-like protein 3148898..3150850 Prevotella ruminicola 23 9001114 YP_003575849.1 CDS PRU_2600 NC_014033.1 3150859 3152250 D identified by similarity to SP:P30868; glycoside-pentoside-hexuronide (GPH):cation symporter family sugar transporter 3150859..3152250 Prevotella ruminicola 23 9000452 YP_003575850.1 CDS PRU_2601 NC_014033.1 3152393 3154408 D identified by similarity to GB:CAA71065.1; match to protein family HMM PF07228; spoIIE family protein 3152393..3154408 Prevotella ruminicola 23 9002203 YP_003575851.1 CDS PRU_2602 NC_014033.1 3154458 3154979 D identified by similarity to PIR:T36818; hypothetical protein 3154458..3154979 Prevotella ruminicola 23 9000638 YP_003575852.1 CDS PRU_2603 NC_014033.1 3154983 3156668 D identified by match to protein family HMM PF00485; phosphoribulokinase/uridine kinase family protein 3154983..3156668 Prevotella ruminicola 23 9002704 YP_003575853.1 CDS PRU_2604 NC_014033.1 3157169 3158371 D identified by similarity to GB:AAO75903.1; hypothetical protein 3157169..3158371 Prevotella ruminicola 23 9002033 YP_003575854.1 CDS PRU_2605 NC_014033.1 3158526 3158969 D identified by similarity to GB:AAO79094.1; hypothetical protein 3158526..3158969 Prevotella ruminicola 23 9000205 YP_003575855.1 CDS PRU_2606 NC_014033.1 3159036 3161006 R identified by similarity to SP:P82593; match to protein family HMM PF02018; match to protein family HMM PF06964; alpha-N-arabinofuranosidase complement(3159036..3161006) Prevotella ruminicola 23 9000324 YP_003575856.1 CDS PRU_2607 NC_014033.1 3161063 3163429 R identified by similarity to PIR:E83884; match to protein family HMM PF07944; hypothetical protein complement(3161063..3163429) Prevotella ruminicola 23 9000771 YP_003575857.1 CDS PRU_2608 NC_014033.1 3163487 3164371 R identified by match to protein family HMM PF00294; pfkB family kinase complement(3163487..3164371) Prevotella ruminicola 23 8999983 YP_003575858.1 CDS PRU_2609 NC_014033.1 3164501 3165823 D identified by match to protein family HMM PF00295; polygalacturonase family protein 3164501..3165823 Prevotella ruminicola 23 9002749 YP_003575859.1 CDS PRU_2610 NC_014033.1 3165917 3168886 D identified by similarity to GB:AAA95938.1; match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane receptor (OMR) family transporter 3165917..3168886 Prevotella ruminicola 23 9001948 YP_003575860.1 CDS PRU_2611 NC_014033.1 3168918 3170540 D identified by match to protein family HMM PF07980; lipoprotein 3168918..3170540 Prevotella ruminicola 23 9001727 YP_003575861.1 CDS PRU_2612 NC_014033.1 3170667 3171626 D identified by similarity to GB:CAG36135.1; match to protein family HMM PF09084; hypothetical protein 3170667..3171626 Prevotella ruminicola 23 9001293 YP_003575862.1 CDS PRU_2613 NC_014033.1 3171633 3173555 D identified by match to protein family HMM PF00672; match to protein family HMM PF07228; HAMP/SpoIIE domain-containing protein 3171633..3173555 Prevotella ruminicola 23 9002654 YP_003575863.1 CDS PRU_2614 NC_014033.1 3173641 3174912 D identified by similarity to GB:AAO79849.1; match to protein family HMM PF00328; hypothetical protein 3173641..3174912 Prevotella ruminicola 23 9000134 YP_003575864.1 CDS PRU_2615 NC_014033.1 3174925 3175890 R identified by match to protein family HMM PF03576; T4 family peptidase complement(3174925..3175890) Prevotella ruminicola 23 9000687 YP_003575865.1 CDS ribF NC_014033.1 3176288 3177235 D identified by similarity to SP:P08391; match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; riboflavin biosynthesis protein RibF 3176288..3177235 Prevotella ruminicola 23 9002781 YP_003575866.1 CDS PRU_2618 NC_014033.1 3177244 3178014 D identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein 3177244..3178014 Prevotella ruminicola 23 9001693 YP_003575867.1 CDS PRU_2619 NC_014033.1 3178174 3178668 R identified by similarity to GB:AAO78503.1; hypothetical protein complement(3178174..3178668) Prevotella ruminicola 23 9002296 YP_003575868.1 CDS PRU_2620 NC_014033.1 3178643 3179161 R identified by similarity to SP:Q06198; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; ECF family RNA polymerase sigma-70 factor complement(3178643..3179161) Prevotella ruminicola 23 9001059 YP_003575869.1 CDS argB NC_014033.1 3179220 3179993 R identified by match to protein family HMM PF00696; match to protein family HMM TIGR00761; acetylglutamate kinase complement(3179220..3179993) Prevotella ruminicola 23 9002035 YP_003575870.1 CDS PRU_2622 NC_014033.1 3180017 3181066 R identified by match to protein family HMM PF04607; RelA/SpoT domain-containing protein complement(3180017..3181066) Prevotella ruminicola 23 9000523 YP_003575871.1 CDS PRU_2623 NC_014033.1 3181066 3181368 R identified by similarity to SP:P17903; match to protein family HMM PF01740; anti-anti-sigma factor complement(3181066..3181368) Prevotella ruminicola 23 9000809 YP_003575872.1 CDS PRU_2624 NC_014033.1 3181375 3181794 R identified by similarity to OMNI:NTL01SS01077; serine-protein kinase complement(3181375..3181794) Prevotella ruminicola 23 9000596 YP_003575873.1 CDS speA NC_014033.1 3181867 3183759 R identified by similarity to SP:P21170; match to protein family HMM PF00278; match to protein family HMM PF02784; match to protein family HMM TIGR01273; arginine 2-monooxygenase complement(3181867..3183759) Prevotella ruminicola 23 9002609 YP_003575874.1 CDS aroK NC_014033.1 3183782 3184309 R identified by match to protein family HMM PF01202; shikimate kinase complement(3183782..3184309) Prevotella ruminicola 23 9001808 YP_003575875.1 CDS topA NC_014033.1 3184306 3186708 R identified by match to protein family HMM PF01131; match to protein family HMM PF01751; match to protein family HMM TIGR01051; DNA topoisomerase complement(3184306..3186708) Prevotella ruminicola 23 9000912 YP_003575876.1 CDS PRU_2628 NC_014033.1 3186796 3187329 R identified by match to protein family HMM PF00293; match to protein family HMM PF09297; NUDIX family hydrolase complement(3186796..3187329) Prevotella ruminicola 23 9001742 YP_003575877.1 CDS PRU_2629 NC_014033.1 3187336 3188787 R identified by similarity to GB:AAO78702.1; match to protein family HMM PF03629; sialic acid-specific 9-O-acetylesterase-like protein complement(3187336..3188787) Prevotella ruminicola 23 9002532 YP_003575878.1 CDS PRU_2630 NC_014033.1 3188903 3189751 D identified by similarity to GB:CAD45188.1; pectin acetylesterase 3188903..3189751 Prevotella ruminicola 23 9000531 YP_003575879.1 CDS PRU_2631 NC_014033.1 3189762 3190049 D identified by similarity to GB:AAO78085.1; hypothetical protein 3189762..3190049 Prevotella ruminicola 23 9002178 YP_003575880.1 CDS PRU_2632 NC_014033.1 3190089 3191243 R identified by similarity to GB:AAQ66246.1; match to protein family HMM PF00578; match to protein family HMM PF08534; lipoprotein complement(3190089..3191243) Prevotella ruminicola 23 9001391 YP_003575881.1 CDS pnp NC_014033.1 3191409 3193787 D identified by similarity to SP:P50849; match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; match to protein family HMM TIGR03591; polyribonucleotide nucleotidyltransferase 3191409..3193787 Prevotella ruminicola 23 9002267 YP_003575882.1 CDS rplM NC_014033.1 3194087 3194548 D identified by similarity to SP:Q00990; match to protein family HMM PF00572; match to protein family HMM TIGR01066; 50S ribosomal protein L13 3194087..3194548 Prevotella ruminicola 23 9001184 YP_003575883.1 CDS rpsI NC_014033.1 3194558 3194944 D identified by match to protein family HMM PF00380; 30S ribosomal protein S9 3194558..3194944 Prevotella ruminicola 23 9000338 YP_003575884.1 CDS rpsB NC_014033.1 3195065 3195874 D identified by similarity to SP:Q10796; match to protein family HMM PF00318; match to protein family HMM TIGR01011; 30S ribosomal protein S2 3195065..3195874 Prevotella ruminicola 23 9000538 YP_003575885.1 CDS tsf NC_014033.1 3195914 3196912 D identified by match to protein family HMM PF00627; match to protein family HMM PF00889; match to protein family HMM TIGR00116; translation elongation factor Ts 3195914..3196912 Prevotella ruminicola 23 9002527 YP_003575886.1 CDS PRU_2638 NC_014033.1 3196974 3197933 D identified by match to protein family HMM PF00294; pfkB family kinase 3196974..3197933 Prevotella ruminicola 23 9001474 YP_003575887.1 CDS PRU_2639 NC_014033.1 3197975 3199777 R identified by similarity to SP:P23304; match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF03880; DEAD/DEAH box helicase complement(3197975..3199777) Prevotella ruminicola 23 9001318 YP_003575888.1 CDS PRU_2640 NC_014033.1 3199787 3200512 R identified by similarity to GB:CAF30361.1; hypothetical protein complement(3199787..3200512) Prevotella ruminicola 23 9000861 YP_003575889.1 CDS PRU_2641 NC_014033.1 3200650 3201183 D identified by similarity to OMNI:PINA0857; match to protein family HMM PF03641; match to protein family HMM TIGR00730; hypothetical protein 3200650..3201183 Prevotella ruminicola 23 9000042 YP_003575890.1 CDS PRU_2642 NC_014033.1 3201237 3201341 R lipoprotein complement(3201237..3201341) Prevotella ruminicola 23 9001747 YP_003575891.1 CDS PRU_2643 NC_014033.1 3201443 3201982 R identified by similarity to GB:AAO76747.1; hypothetical protein complement(3201443..3201982) Prevotella ruminicola 23 9000265 YP_003575892.1 CDS PRU_2644 NC_014033.1 3202436 3203416 D identified by glimmer; hypothetical protein 3202436..3203416 Prevotella ruminicola 23 9002450 YP_003575893.1 CDS PRU_2645 NC_014033.1 3203413 3203979 D identified by glimmer; hypothetical protein 3203413..3203979 Prevotella ruminicola 23 9001457 YP_003575894.1 CDS PRU_2646 NC_014033.1 3204544 3204933 D identified by glimmer; hypothetical protein 3204544..3204933 Prevotella ruminicola 23 9000835 YP_003575895.1 CDS PRU_2647 NC_014033.1 3204912 3207176 D identified by glimmer; hypothetical protein 3204912..3207176 Prevotella ruminicola 23 9001260 YP_003575896.1 CDS PRU_2649 NC_014033.1 3207769 3209892 R identified by similarity to GB:AAQ65685.1; hypothetical protein complement(3207769..3209892) Prevotella ruminicola 23 9000616 YP_003575897.1 CDS PRU_2650 NC_014033.1 3209897 3211363 R identified by similarity to GB:AAC69533.1; match to protein family HMM PF01943; polysaccharide biosynthesis protein complement(3209897..3211363) Prevotella ruminicola 23 9001878 YP_003575898.1 CDS PRU_2651 NC_014033.1 3211369 3212601 R identified by similarity to SP:P35157; similarity to SP:P35158; match to protein family HMM PF07670; spore maturation protein AB-like protein complement(3211369..3212601) Prevotella ruminicola 23 9000884 YP_003575899.1 CDS PRU_2652 NC_014033.1 3212920 3215019 R identified by glimmer; hypothetical protein complement(3212920..3215019) Prevotella ruminicola 23 9001833 YP_003575900.1 CDS PRU_2653 NC_014033.1 3215490 3216776 D identified by glimmer; hypothetical protein 3215490..3216776 Prevotella ruminicola 23 9000894 YP_003575901.1 CDS PRU_2654 NC_014033.1 3216869 3219169 R identified by glimmer; hypothetical protein complement(3216869..3219169) Prevotella ruminicola 23 9000289 YP_003575902.1 CDS PRU_2655 NC_014033.1 3219517 3221856 D identified by similarity to GB:AAA86753.2; match to protein family HMM PF00933; match to protein family HMM PF01915; glucan 1,4-beta-glucosidase 3219517..3221856 Prevotella ruminicola 23 9002124 YP_003575903.1 CDS PRU_2656 NC_014033.1 3221869 3223110 D identified by match to protein family HMM PF00756; match to protein family HMM PF02922; isoamylase domain/esterase family protein 3221869..3223110 Prevotella ruminicola 23 9002584 YP_003575904.1 CDS PRU_2657 NC_014033.1 3223150 3223599 R identified by match to protein family HMM PF02308; MgtC family protein complement(3223150..3223599) Prevotella ruminicola 23 9002012 YP_003575905.1 CDS PRU_2658 NC_014033.1 3223602 3224732 R identified by similarity to GB:AAQ65496.1; hypothetical protein complement(3223602..3224732) Prevotella ruminicola 23 9001303 YP_003575906.1 CDS PRU_2659 NC_014033.1 3224785 3226404 R helicase complement(3224785..3226404) Prevotella ruminicola 23 9000489 YP_003575907.1 CDS PRU_2660 NC_014033.1 3226754 3227566 D identified by similarity to GB:AAG01573.1; match to protein family HMM PF08543; pyridoxal kinase-like protein 3226754..3227566 Prevotella ruminicola 23 9002141 YP_003575908.1 CDS rluA NC_014033.1 3227548 3228927 D identified by similarity to SP:P39219; match to protein family HMM PF00849; ribosomal large subunit pseudouridine synthase A 3227548..3228927 Prevotella ruminicola 23 9001692 YP_003575909.1 CDS PRU_2662 NC_014033.1 3228955 3231477 D identified by match to protein family HMM PF01433; M1 family peptidase 3228955..3231477 Prevotella ruminicola 23 9000717 YP_003575910.1 CDS purL NC_014033.1 3231607 3235317 D identified by similarity to SP:P15254; match to protein family HMM PF02769; phosphoribosylformylglycinamidine synthase 3231607..3235317 Prevotella ruminicola 23 9000276 YP_003575911.1 CDS PRU_2664 NC_014033.1 3235296 3235865 D identified by match to protein family HMM PF02417; chromate transport protein 3235296..3235865 Prevotella ruminicola 23 9002275 YP_003575912.1 CDS PRU_2665 NC_014033.1 3235882 3236457 D identified by match to protein family HMM PF02417; chromate transport protein 3235882..3236457 Prevotella ruminicola 23 9001254 YP_003575913.1 CDS PRU_2666 NC_014033.1 3236530 3237555 D identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 3236530..3237555 Prevotella ruminicola 23 9000642 YP_003575914.1 CDS PRU_2667 NC_014033.1 3237579 3238880 D identified by match to protein family HMM PF07690; glycoside-pentoside-hexuronide (GPH):cation symporter family sugar transporter 3237579..3238880 Prevotella ruminicola 23 9002488 YP_003575915.1 CDS PRU_2668 NC_014033.1 3238877 3241798 D identified by match to protein family HMM PF00165; match to protein family HMM PF07494; match to protein family HMM PF07495; AraC family transcriptional regulator 3238877..3241798 Prevotella ruminicola 23 9001546 YP_003575916.1 CDS PRU_2669 NC_014033.1 3242025 3245198 D identified by similarity to GB:CAA10226.1; match to protein family HMM PF00593; match to protein family HMM PF07715; receptor antigen RagA 3242025..3245198 Prevotella ruminicola 23 9000931 YP_003575917.1 CDS PRU_2670 NC_014033.1 3245404 3246984 D identified by similarity to GB:AAO78131.1; match to protein family HMM PF07980; hypothetical protein 3245404..3246984 Prevotella ruminicola 23 9000035 YP_003575918.1 CDS PRU_2671 NC_014033.1 3247217 3248941 D identified by glimmer; hypothetical protein 3247217..3248941 Prevotella ruminicola 23 9000513 YP_003575919.1 CDS PRU_2672 NC_014033.1 3248951 3250726 D identified by similarity to GB:CAA71485.1; arabinan endo-1,5-alpha-L-arabinosidase 3248951..3250726 Prevotella ruminicola 23 8999973 YP_003575920.1 CDS PRU_2673 NC_014033.1 3250731 3251780 D identified by similarity to PDB:1GYD_B; match to protein family HMM PF04616; arabinan endo-1,5-alpha-L-arabinosidase 3250731..3251780 Prevotella ruminicola 23 9000736 YP_003575921.1 CDS PRU_2674 NC_014033.1 3251810 3253936 D identified by match to protein family HMM PF04616; family 43 glycosyl hydrolase 3251810..3253936 Prevotella ruminicola 23 9001160 YP_003575922.1 CDS PRU_2675 NC_014033.1 3253937 3254803 R identified by glimmer; hypothetical protein complement(3253937..3254803) Prevotella ruminicola 23 9002017 YP_003575923.1 CDS PRU_2676 NC_014033.1 3254939 3255961 D identified by similarity to SP:P48842; match to protein family HMM PF07745; family 53 glycosyl hydrolase 3254939..3255961 Prevotella ruminicola 23 9002383 YP_003575924.1 CDS PRU_2677 NC_014033.1 3255954 3257114 D BNR repeat domain-containing protein 3255954..3257114 Prevotella ruminicola 23 9000380 YP_003575925.1 CDS PRU_2678 NC_014033.1 3257174 3258493 D identified by similarity to PDB:1ODS_A; match to protein family HMM PF05448; family 7 carbohydrate esterase 3257174..3258493 Prevotella ruminicola 23 9000738 YP_003575926.1 CDS PRU_2679 NC_014033.1 3258505 3259623 D identified by similarity to GB:CAG76684.1; hypothetical protein 3258505..3259623 Prevotella ruminicola 23 9001533 YP_003575927.1 CDS PRU_2680 NC_014033.1 3259659 3261284 D identified by similarity to GB:BAC87941.1; match to protein family HMM PF04616; xylan 1,4-beta-xylosidase 3259659..3261284 Prevotella ruminicola 23 9001977 YP_003575928.1 CDS PRU_2681 NC_014033.1 3261501 3264536 D identified by similarity to GB:AAA95938.1; match to protein family HMM PF00593; match to protein family HMM PF07715; outer membrane protein SusC 3261501..3264536 Prevotella ruminicola 23 9002736 YP_003575929.1 CDS PRU_2682 NC_014033.1 3264612 3266174 D identified by similarity to GB:AAB42172.1; match to protein family HMM PF07980; outer membrane protein SusD 3264612..3266174 Prevotella ruminicola 23 9001210 YP_003575930.1 CDS PRU_2683 NC_014033.1 3266199 3267305 D lipoprotein 3266199..3267305 Prevotella ruminicola 23 9001452 YP_003575931.1 CDS PRU_2684 NC_014033.1 3267372 3268709 D identified by similarity to GB:AAB42173.1; hypothetical protein 3267372..3268709 Prevotella ruminicola 23 9002220 YP_003575932.1 CDS PRU_2685 NC_014033.1 3268833 3270623 D identified by match to protein family HMM PF00128; alpha-amylase family protein 3268833..3270623 Prevotella ruminicola 23 9001418 YP_003575933.1 CDS PRU_2686 NC_014033.1 3270628 3271431 R identified by match to protein family HMM PF00535; group 2 family glycosyltransferase complement(3270628..3271431) Prevotella ruminicola 23 9002194 YP_003575934.1 CDS PRU_2687 NC_014033.1 3271433 3272011 R bacterial transferase complement(3271433..3272011) Prevotella ruminicola 23 9000187 YP_003575935.1 CDS PRU_2688 NC_014033.1 3272008 3273282 R identified by match to protein family HMM PF00534; group 1 family glycosyltransferase complement(3272008..3273282) Prevotella ruminicola 23 9000962 YP_003575936.1 CDS ispF NC_014033.1 3273693 3274172 R identified by similarity to SP:P36663; match to protein family HMM PF02542; match to protein family HMM TIGR00151; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(3273693..3274172) Prevotella ruminicola 23 9001208 YP_003575937.1 CDS PRU_2690 NC_014033.1 3274212 3275351 R identified by similarity to GB:AAQ65282.1; hypothetical protein complement(3274212..3275351) Prevotella ruminicola 23 9001874 YP_003575938.1 CDS PRU_2691 NC_014033.1 3275443 3278583 R identified by similarity to GB:AAQ65281.1; hypothetical protein complement(3275443..3278583) Prevotella ruminicola 23 9002089 YP_003575939.1 CDS PRU_2692 NC_014033.1 3278620 3279237 R identified by match to protein family HMM PF01557; FAH family protein complement(3278620..3279237) Prevotella ruminicola 23 9000549 YP_003575940.1 CDS PRU_2693 NC_014033.1 3279446 3281809 R identified by similarity to GB:AAA86753.2; match to protein family HMM PF00933; match to protein family HMM PF01915; glucan 1,4-beta-glucosidase complement(3279446..3281809) Prevotella ruminicola 23 9000288 YP_003575941.1 CDS PRU_2694 NC_014033.1 3281813 3283018 R identified by match to protein family HMM PF00756; match to protein family HMM PF02922; isoamylase domain/esterase family protein complement(3281813..3283018) Prevotella ruminicola 23 9001777 YP_003575942.1 CDS PRU_2695 NC_014033.1 3283108 3283998 R identified by similarity to GB:CAE29370.1; hypothetical protein complement(3283108..3283998) Prevotella ruminicola 23 9001512 YP_003575943.1 CDS PRU_2696 NC_014033.1 3284072 3285658 R identified by match to protein family HMM PF07980; lipoprotein complement(3284072..3285658) Prevotella ruminicola 23 9002299 YP_003575944.1 CDS PRU_2697 NC_014033.1 3285699 3288728 R identified by similarity to GB:AAO78416.1; match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein complement(3285699..3288728) Prevotella ruminicola 23 9002047 YP_003575945.1 CDS PRU_2698 NC_014033.1 3288998 3290077 D identified by similarity to GB:AAK39518.1; acid phosphatase 3288998..3290077 Prevotella ruminicola 23 9002451 YP_003575946.1 CDS PRU_2699 NC_014033.1 3290194 3294234 D identified by match to protein family HMM PF00072; match to protein family HMM PF00165; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF07494; match to protein family HMM PF07495; sensor histidine kinase/DNA-binding response regulator 3290194..3294234 Prevotella ruminicola 23 9000128 YP_003575947.1 CDS PRU_2700 NC_014033.1 3294345 3296276 D identified by similarity to GB:AAC44670.1; match to protein family HMM PF00128; match to protein family HMM PF09087; neopullulanase 3294345..3296276 Prevotella ruminicola 23 9001277 YP_003575948.1 CDS PRU_2701 NC_014033.1 3296331 3297782 R identified by match to protein family HMM PF04616; family 43 glycosyl hydrolase complement(3296331..3297782) Prevotella ruminicola 23 9000978 YP_003575949.1 CDS PRU_2702 NC_014033.1 3297784 3299886 R identified by match to protein family HMM PF04616; family 43 glycosyl hydrolase complement(3297784..3299886) Prevotella ruminicola 23 9000996 YP_003575950.1 CDS PRU_2703 NC_014033.1 3300434 3302188 R identified by similarity to GB:AAO78131.1; match to protein family HMM PF07980; hypothetical protein complement(3300434..3302188) Prevotella ruminicola 23 9001645 YP_003575951.1 CDS PRU_2704 NC_014033.1 3302217 3305357 R identified by similarity to GB:AAO78196.1; match to protein family HMM PF07715; TonB dependent receptor complement(3302217..3305357) Prevotella ruminicola 23 9002067 YP_003575952.1 CDS PRU_2705 NC_014033.1 3305654 3307834 R identified by similarity to GB:CAA71065.1; match to protein family HMM PF07228; spoIIE family protein complement(3305654..3307834) Prevotella ruminicola 23 9002685 YP_003575953.1 CDS PRU_2706 NC_014033.1 3308109 3310286 D cellulase 3308109..3310286 Prevotella ruminicola 23 9000609 YP_003575954.1 CDS PRU_2707 NC_014033.1 3310311 3312326 D identified by similarity to SP:P10478; similarity to GB:AAC14690.1; match to protein family HMM PF00756; match to protein family HMM PF03629; acetylxylan esterase/endo-1,4-beta-xylanase 3310311..3312326 Prevotella ruminicola 23 9001175 YP_003575955.1 CDS PRU_2708 NC_014033.1 3312569 3315778 D identified by similarity to GB:CAA10226.1; match to protein family HMM PF00593; match to protein family HMM PF07715; receptor antigen RagA 3312569..3315778 Prevotella ruminicola 23 9001658 YP_003575956.1 CDS PRU_2709 NC_014033.1 3315800 3317413 D identified by match to protein family HMM PF07980; lipoprotein 3315800..3317413 Prevotella ruminicola 23 9002290 YP_003575957.1 CDS PRU_2710 NC_014033.1 3317462 3318919 R identified by similarity to GB:AAO77739.1; match to protein family HMM PF06824; hypothetical protein complement(3317462..3318919) Prevotella ruminicola 23 9000124 YP_003575958.1 CDS PRU_2711 NC_014033.1 3319064 3321244 D identified by match to protein family HMM PF07971; match to protein family HMM TIGR01180; alpha-1,2-mannosidase family protein 3319064..3321244 Prevotella ruminicola 23 9000685 YP_003575959.1 CDS PRU_2712 NC_014033.1 3321402 3324434 D identified by match to protein family HMM PF00593; match to protein family HMM PF07715; hypothetical protein 3321402..3324434 Prevotella ruminicola 23 9002201 YP_003575960.1 CDS PRU_2713 NC_014033.1 3324434 3326071 D identified by match to protein family HMM PF07980; lipoprotein 3324434..3326071 Prevotella ruminicola 23 9001429 YP_003575961.1 CDS PRU_2714 NC_014033.1 3326125 3327249 D lipoprotein 3326125..3327249 Prevotella ruminicola 23 9000922 YP_003575962.1 CDS PRU_2715 NC_014033.1 3327396 3328406 D identified by similarity to PIR:JC7520; match to protein family HMM PF03663; glysosyl hydrolase, family 76 3327396..3328406 Prevotella ruminicola 23 9000173 YP_003575963.1 CDS PRU_2716 NC_014033.1 3328360 3332364 R identified by match to protein family HMM PF00072; match to protein family HMM PF00165; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF07495; DNA-binding sensor histidine kinase/response regulator complement(3328360..3332364) Prevotella ruminicola 23 9000337 YP_003575964.1 CDS PRU_2717 NC_014033.1 3332546 3333670 D identified by match to protein family HMM PF01637; ATPase 3332546..3333670 Prevotella ruminicola 23 9002521 YP_003575965.1 CDS PRU_2718 NC_014033.1 3333719 3335146 R identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein complement(3333719..3335146) Prevotella ruminicola 23 9001470 YP_003575966.1 CDS PRU_2720 NC_014033.1 3336357 3337193 D identified by similarity to GB:AAQ65638.1; match to protein family HMM PF09697; hypothetical protein 3336357..3337193 Prevotella ruminicola 23 9001365 YP_003575967.1 CDS PRU_2721 NC_014033.1 3337391 3338245 D identified by similarity to GB:AAQ65638.1; match to protein family HMM PF09697; hypothetical protein 3337391..3338245 Prevotella ruminicola 23 9002116 YP_003575968.1 CDS PRU_2722 NC_014033.1 3338242 3340806 D identified by similarity to GB:AAQ65640.1; hypothetical protein 3338242..3340806 Prevotella ruminicola 23 9002309 YP_003575969.1 CDS PRU_2723 NC_014033.1 3340990 3341376 D identified by similarity to SP:P18415; match to protein family HMM PF03965; transcriptional regulator 3340990..3341376 Prevotella ruminicola 23 9001618 YP_003575970.1 CDS PRU_2724 NC_014033.1 3341373 3342614 D identified by similarity to GB:AAO79304.1; match to protein family HMM PF05569; hypothetical protein 3341373..3342614 Prevotella ruminicola 23 8999976 YP_003575971.1 CDS PRU_2725 NC_014033.1 3342638 3343726 D identified by similarity to SP:P35160; match to protein family HMM PF00578; match to protein family HMM PF08534; thioredoxin domain-containing protein 3342638..3343726 Prevotella ruminicola 23 9002112 YP_003575972.1 CDS PRU_2727 NC_014033.1 3345848 3346444 R identified by glimmer; hypothetical protein complement(3345848..3346444) Prevotella ruminicola 23 9001979 YP_003575973.1 CDS PRU_2728 NC_014033.1 3346598 3348778 D identified by match to protein family HMM PF00331; match to protein family HMM PF00756; match to protein family HMM PF02922; family 10 glycosyl hydrolase/isoamylase domain/esterase family protein 3346598..3348778 Prevotella ruminicola 23 9000378 YP_003575974.1 CDS PRU_2729 NC_014033.1 3349047 3351512 D identified by similarity to GB:AAO76117.1; hypothetical protein 3349047..3351512 Prevotella ruminicola 23 9002626 YP_003575975.1 CDS PRU_2730 NC_014033.1 3351543 3354128 D identified by similarity to GB:CAD48309.1; match to protein family HMM PF00933; match to protein family HMM PF01915; match to protein family HMM PF07691; 1,4-beta-xylosidase 3351543..3354128 Prevotella ruminicola 23 9001559 YP_003575976.1 CDS PRU_2731 NC_014033.1 3354118 3355410 R identified by similarity to SP:P23861; polyamine ABC transporter periplasmic polyamine-binding protein complement(3354118..3355410) Prevotella ruminicola 23 9001080 YP_003575977.1 CDS PRU_2732 NC_014033.1 3355428 3359432 R identified by match to protein family HMM PF00072; match to protein family HMM PF00165; match to protein family HMM PF00512; match to protein family HMM PF02518; match to protein family HMM PF07494; match to protein family HMM PF07495; sensor histidine kinase/DNA-binding response regulator complement(3355428..3359432) Prevotella ruminicola 23 9001389 YP_003575978.1 CDS PRU_2733 NC_014033.1 3359618 3362110 D identified by similarity to GB:AAM39029.1; hypothetical protein 3359618..3362110 Prevotella ruminicola 23 9001342 YP_003575979.1 CDS PRU_2734 NC_014033.1 3362353 3365487 D identified by similarity to GB:AAO77924.1; match to protein family HMM PF07715; hypothetical protein 3362353..3365487 Prevotella ruminicola 23 9000536 YP_003575980.1 CDS PRU_2735 NC_014033.1 3365524 3367398 D identified by match to protein family HMM PF07980; hypothetical protein 3365524..3367398 Prevotella ruminicola 23 9002534 YP_003575981.1 CDS PRU_2736 NC_014033.1 3367435 3370236 D identified by match to protein family HMM PF00593; hypothetical protein 3367435..3370236 Prevotella ruminicola 23 9001153 YP_003575982.1 CDS PRU_2737 NC_014033.1 3370250 3372019 D identified by match to protein family HMM PF07980; lipoprotein 3370250..3372019 Prevotella ruminicola 23 9000354 YP_003575983.1 CDS PRU_2738 NC_014033.1 3372054 3373088 D lipoprotein 3372054..3373088 Prevotella ruminicola 23 9000171 YP_003575984.1 CDS PRU_2739 NC_014033.1 3373108 3375231 D identified by similarity to GB:AAB81559.1; match to protein family HMM PF00331; endo-1,4-beta-xylanase 3373108..3375231 Prevotella ruminicola 23 9002174 YP_003575985.1 CDS PRU_2740 NC_014033.1 3375588 3377027 D identified by glimmer; hypothetical protein 3375588..3377027 Prevotella ruminicola 23 9000745 YP_003575986.1 CDS PRU_2741 NC_014033.1 3377011 3378495 D identified by glimmer; hypothetical protein 3377011..3378495 Prevotella ruminicola 23 8999966 YP_003575987.1 CDS PRU_2743 NC_014033.1 3379740 3381188 D identified by match to protein family HMM PF07676; lipoprotein 3379740..3381188 Prevotella ruminicola 23 9001526 YP_003575988.1 CDS PRU_2744 NC_014033.1 3381344 3384070 D identified by match to protein family HMM PF03422; match to protein family HMM PF04616; family 43 glycosyl hydrolase/carbohydrate binding family 6 domain-containing protein 3381344..3384070 Prevotella ruminicola 23 8999970 YP_003575989.1 CDS PRU_2745 NC_014033.1 3384080 3386227 D identified by match to protein family HMM PF01055; family 31 glycosyl hydrolase 3384080..3386227 Prevotella ruminicola 23 9000781 YP_003575990.1 CDS PRU_2746 NC_014033.1 3386289 3388175 D identified by similarity to SP:P10478; match to protein family HMM PF00756; xylanase 3386289..3388175 Prevotella ruminicola 23 9001569 YP_003575991.1 CDS PRU_2747 NC_014033.1 3388193 3389377 D hypothetical protein 3388193..3389377 Prevotella ruminicola 23 9002382 YP_003575992.1 CDS PRU_2748 NC_014033.1 3389419 3390318 D identified by similarity to GB:AAL47055.1; triacylglycerol lipase 3389419..3390318 Prevotella ruminicola 23 9002395 YP_003575993.1 CDS pulA NC_014033.1 3390421 3392217 R identified by similarity to GB:AAC44685.1; match to protein family HMM PF00128; match to protein family HMM TIGR02104; pullulanase, type I complement(3390421..3392217) Prevotella ruminicola 23 9001102 YP_003575994.1 CDS susB NC_014033.1 3392329 3394542 R identified by similarity to GB:AAC44671.1; alpha-glucosidase complement(3392329..3394542) Prevotella ruminicola 23 9001890 YP_003575995.1 CDS PRU_2751 NC_014033.1 3394543 3397128 R identified by similarity to GB:AAR99599.1; match to protein family HMM PF02446; 4-alpha-glucanotransferase complement(3394543..3397128) Prevotella ruminicola 23 9002508 YP_003575996.1 CDS PRU_2752 NC_014033.1 3397339 3398991 R identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase complement(3397339..3398991) Prevotella ruminicola 23 9002743 YP_003575997.1 CDS rnr NC_014033.1 3399028 3401169 R identified by match to protein family HMM PF00575; match to protein family HMM PF00773; match to protein family HMM PF08206; match to protein family HMM TIGR00358; match to protein family HMM TIGR02063; ribonuclease R complement(3399028..3401169) Prevotella ruminicola 23 9001965 YP_003575998.1 CDS PRU_2754 NC_014033.1 3401329 3402324 D identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993; NAD-binding domain 4 protein 3401329..3402324 Prevotella ruminicola 23 9001573 YP_003575999.1 CDS PRU_2755 NC_014033.1 3402315 3403271 D identified by match to protein family HMM PF01569; hypothetical protein 3402315..3403271 Prevotella ruminicola 23 9000388 YP_003576000.1 CDS PRU_2756 NC_014033.1 3403416 3403883 D identified by match to protein family HMM PF01272; match to protein family HMM PF03449; match to protein family HMM TIGR01462; transcription elongation factor GreA family protein 3403416..3403883 Prevotella ruminicola 23 9002398 YP_003576001.1 CDS PRU_2757 NC_014033.1 3403915 3404307 D identified by match to protein family HMM PF01230; HIT domain-containing protein 3403915..3404307 Prevotella ruminicola 23 9001593 YP_003576002.1 CDS PRU_2758 NC_014033.1 3404308 3405405 R identified by match to protein family HMM PF00483; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase complement(3404308..3405405) Prevotella ruminicola 23 9001236 YP_003576003.1 CDS PRU_2760 NC_014033.1 3405733 3407175 D identified by similarity to SP:P26509; match to protein family HMM PF00295; endo-polygalacturonase 3405733..3407175 Prevotella ruminicola 23 9002808 YP_003576004.1 CDS hly-III NC_014033.1 3407223 3407870 D identified by similarity to SP:P54176; match to protein family HMM PF03006; hemolysin III 3407223..3407870 Prevotella ruminicola 23 9000458 YP_003576005.1 CDS PRU_2762 NC_014033.1 3407954 3409459 D identified by similarity to SP:P38946; match to protein family HMM PF02550; match to protein family HMM TIGR03458; coenzyme A transferase 3407954..3409459 Prevotella ruminicola 23 9002400 YP_003576006.1 CDS PRU_2763 NC_014033.1 3409484 3411577 D identified by match to protein family HMM PF00515; match to protein family HMM PF07228; TPR/SpoIIE domain-containing protein 3409484..3411577 Prevotella ruminicola 23 9002191 YP_003576007.1 CDS PRU_2764 NC_014033.1 3411919 3412917 D identified by match to protein family HMM PF00532; transcriptional regulator 3411919..3412917 Prevotella ruminicola 23 9002697 YP_003576008.1 CDS PRU_2765 NC_014033.1 3412945 3415848 D identified by similarity to GB:AAO75396.1; hypothetical protein 3412945..3415848 Prevotella ruminicola 23 9000999 YP_003576009.1 CDS PRU_2766 NC_014033.1 3415949 3416839 D identified by match to protein family HMM PF00165; match to protein family HMM PF08543; phosphomethylpyrimidine kinase/AraC family transcriptional regulator 3415949..3416839 Prevotella ruminicola 23 9000091 YP_003576010.1 CDS PRU_2767 NC_014033.1 3416847 3417722 D identified by match to protein family HMM PF01680; match to protein family HMM PF05690; match to protein family HMM TIGR00343; pyridoxine biosynthesis protein 3416847..3417722 Prevotella ruminicola 23 9002550 YP_003576011.1 CDS pdxT NC_014033.1 3417745 3418344 D identified by match to protein family HMM PF01174; match to protein family HMM PF07685; match to protein family HMM TIGR03800; pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 3417745..3418344 Prevotella ruminicola 23 9002556 YP_003576012.1 CDS PRU_2769 NC_014033.1 3418328 3420835 R identified by match to protein family HMM PF00703; match to protein family HMM PF02836; match to protein family HMM PF02837; family 2 glycosyl hydrolase complement(3418328..3420835) Prevotella ruminicola 23 9001773 YP_003576013.1 CDS PRU_2770 NC_014033.1 3420886 3421905 R identified by similarity to GB:AAO76548.1; hypothetical protein complement(3420886..3421905) Prevotella ruminicola 23 9001350 YP_003576014.1 CDS PRU_2772 NC_014033.1 3422874 3423344 D identified by similarity to GB:AAN67722.1; match to protein family HMM PF08291; hypothetical protein 3422874..3423344 Prevotella ruminicola 23 9000477 YP_003576015.1 CDS PRU_2773 NC_014033.1 3423367 3424056 D identified by similarity to GB:AAO76280.1; hypothetical protein 3423367..3424056 Prevotella ruminicola 23 9001259 YP_003576016.1 CDS PRU_2774 NC_014033.1 3424100 3425932 D identified by match to protein family HMM PF01751; Toprim domain-containing protein 3424100..3425932 Prevotella ruminicola 23 9001601 YP_003576017.1 CDS PRU_2775 NC_014033.1 3426364 3426999 D identified by similarity to GB:AAR34743.1; hypothetical protein 3426364..3426999 Prevotella ruminicola 23 9001607 YP_003576018.1 CDS PRU_2776 NC_014033.1 3427004 3427807 D identified by similarity to GB:AAR34744.1; match to protein family HMM PF08843; hypothetical protein 3427004..3427807 Prevotella ruminicola 23 9001716 YP_003576019.1 CDS PRU_2777 NC_014033.1 3428070 3429728 D identified by glimmer; hypothetical protein 3428070..3429728 Prevotella ruminicola 23 9002531 YP_003576020.1 CDS PRU_2778 NC_014033.1 3429906 3430430 D DNA-binding protein 3429906..3430430 Prevotella ruminicola 23 9000328 YP_003576021.1 CDS PRU_2779 NC_014033.1 3430507 3430605 D identified by glimmer; hypothetical protein 3430507..3430605 Prevotella ruminicola 23 9001326 YP_003576022.1 CDS PRU_2780 NC_014033.1 3430679 3432268 R identified by match to protein family HMM PF01120; family 29 glycosyl hydrolase complement(3430679..3432268) Prevotella ruminicola 23 9001950 YP_003576023.1 CDS fucI NC_014033.1 3432328 3434148 R identified by similarity to SP:P11552; match to protein family HMM PF02952; match to protein family HMM PF07881; match to protein family HMM PF07882; match to protein family HMM TIGR01089; arabinose isomerase complement(3432328..3434148) Prevotella ruminicola 23 9001652 YP_003576024.1 CDS PRU_2782 NC_014033.1 3434141 3434536 R identified by similarity to GB:AAO76383.1; match to protein family HMM PF05336; hypothetical protein complement(3434141..3434536) Prevotella ruminicola 23 9002245 YP_003576025.1 CDS PRU_2783 NC_014033.1 3434779 3435648 D identified by match to protein family HMM PF00165; AraC family transcriptional regulator 3434779..3435648 Prevotella ruminicola 23 9001664 YP_003576026.1 CDS hemN NC_014033.1 3435702 3437066 D identified by similarity to SP:P32131; match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00538; coproporphyrinogen dehydrogenase 3435702..3437066 Prevotella ruminicola 23 9002240 YP_003576027.1 CDS hemG NC_014033.1 3437069 3438424 D identified by similarity to SP:P56601; match to protein family HMM PF01266; match to protein family HMM PF01593; match to protein family HMM TIGR00562; protoporphyrinogen oxidase 3437069..3438424 Prevotella ruminicola 23 9000347 YP_003576028.1 CDS PRU_2786 NC_014033.1 3438504 3441131 D identified by match to protein family HMM PF00933; match to protein family HMM PF01915; match to protein family HMM PF07691; family 3 glycosyl hydrolase 3438504..3441131 Prevotella ruminicola 23 9002718 YP_003576029.1 CDS PRU_2787 NC_014033.1 3441174 3441758 D identified by match to protein family HMM PF00881; nitroreductase family protein 3441174..3441758 Prevotella ruminicola 23 9000532 YP_003576030.1 CDS PRU_2788 NC_014033.1 3441888 3442433 D identified by match to protein family HMM PF00255; glutathione peroxidase family protein 3441888..3442433 Prevotella ruminicola 23 9001671 YP_003576031.1 CDS PRU_2789 NC_014033.1 3442456 3442899 D identified by match to protein family HMM PF01047; match to protein family HMM PF03965; MarR family transcriptional regulator 3442456..3442899 Prevotella ruminicola 23 9001446 YP_003576032.1 CDS PRU_2790 NC_014033.1 3442903 3443364 R identified by match to protein family HMM PF01037; AsnC family transcriptional regulator complement(3442903..3443364) Prevotella ruminicola 23 9000850 YP_003576033.1 CDS PRU_2791 NC_014033.1 3443581 3444873 D identified by match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326; O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase family protein 3443581..3444873 Prevotella ruminicola 23 9000521 YP_003576034.1 CDS cysK NC_014033.1 3445050 3445997 D identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; cysteine synthase A 3445050..3445997 Prevotella ruminicola 23 9002214 YP_003576035.1 CDS agp NC_014033.1 3446154 3447563 R identified by similarity to SP:P19926; match to protein family HMM PF00328; glucose-1-phosphatase complement(3446154..3447563) Prevotella ruminicola 23 9001311 YP_003576036.1 CDS PRU_2795 NC_014033.1 3447585 3449339 R identified by match to protein family HMM PF00165; match to protein family HMM PF00515; AraC family transcriptional regulator complement(3447585..3449339) Prevotella ruminicola 23 9001774 YP_003576037.1 CDS PRU_2796 NC_014033.1 3451342 3451836 R identified by match to protein family HMM PF00258; match to protein family HMM TIGR01752; flavodoxin complement(3451342..3451836) Prevotella ruminicola 23 9002120 YP_003576038.1 CDS PRU_2797 NC_014033.1 3451861 3452316 R identified by similarity to GB:AAO75623.1; match to protein family HMM PF09633; hypothetical protein complement(3451861..3452316) Prevotella ruminicola 23 9001466 YP_003576039.1 CDS PRU_2798 NC_014033.1 3452375 3453535 R identified by match to protein family HMM PF01578; cytochrome c assembly family protein complement(3452375..3453535) Prevotella ruminicola 23 9001710 YP_003576040.1 CDS PRU_2799 NC_014033.1 3453566 3455278 R identified by similarity to GB:CAE78545.1; hypothetical protein complement(3453566..3455278) Prevotella ruminicola 23 9000151 YP_003576041.1 CDS PRU_2800 NC_014033.1 3455353 3456687 R identified by similarity to SP:P12608; match to protein family HMM PF09375; lipoprotein complement(3455353..3456687) Prevotella ruminicola 23 9000374 YP_003576042.1 CDS PRU_2801 NC_014033.1 3456721 3457971 R identified by similarity to GB:AAO77587.1; hypothetical protein complement(3456721..3457971) Prevotella ruminicola 23 9001014 YP_003576043.1 CDS PRU_2802 NC_014033.1 3458113 3458832 R identified by match to protein family HMM PF00072; match to protein family HMM PF04397; DNA-binding response regulator complement(3458113..3458832) Prevotella ruminicola 23 9001970 YP_003576044.1 CDS PRU_2803 NC_014033.1 3458829 3459992 R identified by similarity to GB:AAB48182.1; match to protein family HMM PF06580; sensor histidine kinase complement(3458829..3459992) Prevotella ruminicola 23 9000640 YP_003576045.1 CDS PRU_2804 NC_014033.1 3460038 3461804 R identified by similarity to GB:AAO76903.1; lipoprotein complement(3460038..3461804) Prevotella ruminicola 23 9001506 YP_003576046.1 CDS PRU_2805 NC_014033.1 3461908 3462354 R identified by similarity to GB:CAG36739.1; hypothetical protein complement(3461908..3462354) Prevotella ruminicola 23 9002098 YP_003576047.1 CDS PRU_2806 NC_014033.1 3462437 3464743 R identified by glimmer; hypothetical protein complement(3462437..3464743) Prevotella ruminicola 23 9000705 YP_003576048.1 CDS PRU_2808 NC_014033.1 3465612 3466088 R identified by glimmer; hypothetical protein complement(3465612..3466088) Prevotella ruminicola 23 9001974 YP_003576049.1 CDS PRU_2809 NC_014033.1 3466088 3466849 R identified by glimmer; hypothetical protein complement(3466088..3466849) Prevotella ruminicola 23 9000370 YP_003576050.1 CDS PRU_2811 NC_014033.1 3468261 3468353 R identified by glimmer; hypothetical protein complement(3468261..3468353) Prevotella ruminicola 23 9002173 YP_003576051.1 CDS PRU_2812 NC_014033.1 3468669 3469580 D hypothetical protein 3468669..3469580 Prevotella ruminicola 23 9002016 YP_003576052.1 CDS PRU_2813 NC_014033.1 3469577 3470068 D identified by match to protein family HMM PF00929; exonuclease 3469577..3470068 Prevotella ruminicola 23 9000033 YP_003576053.1 CDS PRU_2814 NC_014033.1 3470194 3471165 D death-on-curing family protein 3470194..3471165 Prevotella ruminicola 23 9002019 YP_003576054.1 CDS PRU_2815 NC_014033.1 3471802 3472632 D identified by similarity to PIR:D83933; hypothetical protein 3471802..3472632 Prevotella ruminicola 23 9001437 YP_003576055.1 CDS PRU_2816 NC_014033.1 3473003 3474214 D identified by glimmer; hypothetical protein 3473003..3474214 Prevotella ruminicola 23 9000411 YP_003576056.1 CDS PRU_2817 NC_014033.1 3474309 3474962 D identified by similarity to GB:AAO75732.1; hypothetical protein 3474309..3474962 Prevotella ruminicola 23 9001920 YP_003576057.1 CDS PRU_2818 NC_014033.1 3475083 3475493 D identified by glimmer; hypothetical protein 3475083..3475493 Prevotella ruminicola 23 8999981 YP_003576058.1 CDS PRU_2819 NC_014033.1 3475486 3476532 D identified by glimmer; hypothetical protein 3475486..3476532 Prevotella ruminicola 23 9002659 YP_003576059.1 CDS PRU_2822 NC_014033.1 3478370 3479578 D identified by similarity to GB:AAL29908.1; match to protein family HMM PF06250; hypothetical protein 3478370..3479578 Prevotella ruminicola 23 9001071 YP_003576060.1 CDS PRU_2823 NC_014033.1 3480162 3480707 D identified by similarity to GB:AAO76747.1; hypothetical protein 3480162..3480707 Prevotella ruminicola 23 9000437 YP_003576061.1 CDS PRU_2824 NC_014033.1 3480942 3481583 R identified by match to protein family HMM PF00196; LuxR family transcriptional regulator complement(3480942..3481583) Prevotella ruminicola 23 9000724 YP_003576062.1 CDS PRU_2825 NC_014033.1 3481714 3482523 R identified by match to protein family HMM PF00899; ThiF family protein complement(3481714..3482523) Prevotella ruminicola 23 9001354 YP_003576063.1 CDS PRU_2826 NC_014033.1 3482831 3483709 D identified by glimmer; hypothetical protein 3482831..3483709 Prevotella ruminicola 23 9002274 YP_003576064.1 CDS PRU_2827 NC_014033.1 3483727 3486795 D identified by similarity to GB:CAA10226.1; match to protein family HMM PF00593; match to protein family HMM PF07715; receptor antigen RagA 3483727..3486795 Prevotella ruminicola 23 9000119 YP_003576065.1 CDS PRU_2828 NC_014033.1 3486816 3488447 D identified by match to protein family HMM PF07980; lipoprotein 3486816..3488447 Prevotella ruminicola 23 9001786 YP_003576066.1 CDS PRU_2829 NC_014033.1 3488469 3489737 D identified by glimmer; hypothetical protein 3488469..3489737 Prevotella ruminicola 23 9002385 YP_003576067.1 CDS PRU_2830 NC_014033.1 3489759 3490994 D identified by glimmer; hypothetical protein 3489759..3490994 Prevotella ruminicola 23 9000361 YP_003576068.1 CDS PRU_2831 NC_014033.1 3490997 3491590 D identified by similarity to GB:AAS97225.1; match to protein family HMM PF09719; hypothetical protein 3490997..3491590 Prevotella ruminicola 23 9001083 YP_003576069.1 CDS PRU_2832 NC_014033.1 3491601 3492566 D lipoprotein 3491601..3492566 Prevotella ruminicola 23 9001987 YP_003576070.1 CDS PRU_2833 NC_014033.1 3492523 3494517 D identified by similarity to OMNI:NTL03PA03790; match to protein family HMM PF00593; outer membrane receptor (OMR) family transporter 3492523..3494517 Prevotella ruminicola 23 9002723 YP_003576071.1 CDS PRU_2834 NC_014033.1 3494519 3494896 R identified by match to protein family HMM PF01042; match to protein family HMM TIGR00004; endoribonuclease L-PSP complement(3494519..3494896) Prevotella ruminicola 23 9002182 YP_003576072.1 CDS PRU_2835 NC_014033.1 3494910 3495440 R identified by similarity to SP:P35160; match to protein family HMM PF00578; match to protein family HMM PF08534; thiol-disulfide oxidoreductase complement(3494910..3495440) Prevotella ruminicola 23 9000040 YP_003576073.1 CDS cysS NC_014033.1 3495463 3496953 R identified by match to protein family HMM PF01406; match to protein family HMM PF09190; match to protein family HMM PF09334; match to protein family HMM TIGR00435; cysteine--tRNA ligase complement(3495463..3496953) Prevotella ruminicola 23 9001000 YP_003576074.1 CDS PRU_2838 NC_014033.1 3498300 3500165 R identified by similarity to GB:AAC44671.1; alpha-glucosidase family protein complement(3498300..3500165) Prevotella ruminicola 23 9001436 YP_003576075.1 CDS fucP NC_014033.1 3500171 3501484 R identified by similarity to SP:P11551; match to protein family HMM PF07690; match to protein family HMM TIGR00885; L-fucose permease complement(3500171..3501484) Prevotella ruminicola 23 9000707 YP_003576076.1 CDS PRU_2840 NC_014033.1 3501501 3502517 R identified by match to protein family HMM PF00107; match to protein family HMM PF08240; zinc-binding dehydrogenase family oxidoreductase complement(3501501..3502517) Prevotella ruminicola 23 9000175 YP_003576077.1 CDS PRU_2841 NC_014033.1 3502553 3503464 R identified by match to protein family HMM PF04909; amidohydrolase family protein complement(3502553..3503464) Prevotella ruminicola 23 9001386 YP_003576078.1 CDS PRU_2842 NC_014033.1 3503449 3504399 R identified by match to protein family HMM PF00248; aldo/keto reductase family oxidoreductase complement(3503449..3504399) Prevotella ruminicola 23 9002167 YP_003576079.1 CDS PRU_2843 NC_014033.1 3504415 3505329 R hypothetical protein complement(3504415..3505329) Prevotella ruminicola 23 9000186 YP_003576080.1 CDS PRU_2844 NC_014033.1 3505341 3505955 D identified by similarity to SP:Q59483; similarity to SP:Q59484; match to protein family HMM PF01712; deoxyguanosine kinase/deoxyadenosine kinase subunit 3505341..3505955 Prevotella ruminicola 23 9000991 YP_003576081.1 CDS PRU_2845 NC_014033.1 3505989 3506609 D identified by similarity to SP:Q59483; similarity to SP:Q59484; match to protein family HMM PF01712; deoxyguanosine kinase/deoxyadenosine kinase subunit 3505989..3506609 Prevotella ruminicola 23 9002313 YP_003576082.1 CDS prtC NC_014033.1 3506622 3507869 D identified by similarity to SP:P33437; match to protein family HMM PF01136; collagenase 3506622..3507869 Prevotella ruminicola 23 9001109 YP_003576083.1 CDS PRU_2847 NC_014033.1 3508211 3509170 D identified by similarity to GB:CAG36135.1; match to protein family HMM PF09084; hypothetical protein 3508211..3509170 Prevotella ruminicola 23 9002327 YP_003576084.1 CDS PRU_2848 NC_014033.1 3509183 3511105 D identified by match to protein family HMM PF00672; match to protein family HMM PF02743; match to protein family HMM PF07228; cache/HAMP/SpoIIE domain-containing protein 3509183..3511105 Prevotella ruminicola 23 9001427 YP_003576085.1 CDS PRU_2849 NC_014033.1 3511506 3512102 D identified by similarity to GB:AAO75927.1; hypothetical protein 3511506..3512102 Prevotella ruminicola 23 9000460 YP_003576086.1 CDS PRU_2850 NC_014033.1 3512579 3513004 D identified by match to protein family HMM PF02657; Fe-S metabolism associated family protein 3512579..3513004 Prevotella ruminicola 23 9002623 YP_003576087.1 CDS nrdD_2 NC_014033.1 3513026 3515266 D identified by similarity to SP:P28903; match to protein family HMM PF03477; match to protein family HMM TIGR02487; anaerobic ribonucleoside-triphosphate reductase 3513026..3515266 Prevotella ruminicola 23 9002514 YP_003576088.1 CDS nrdG_2 NC_014033.1 3515263 3515760 D identified by similarity to GB:AAD00216.1; match to protein family HMM TIGR02491; anaerobic ribonucleoside-triphosphate reductase activating protein 3515263..3515760 Prevotella ruminicola 23 9001830 YP_003576089.1 CDS PRU_2853 NC_014033.1 3515750 3517054 R identified by similarity to GB:AAO79849.1; match to protein family HMM PF00328; hypothetical protein complement(3515750..3517054) Prevotella ruminicola 23 9000936 YP_003576090.1 CDS PRU_2854 NC_014033.1 3517174 3517773 D identified by glimmer; hypothetical protein 3517174..3517773 Prevotella ruminicola 23 9001553 YP_003576091.1 CDS rpoN NC_014033.1 3517784 3519298 D identified by match to protein family HMM PF04552; match to protein family HMM PF04963; match to protein family HMM TIGR02395; RNA polymerase sigma-54 factor 3517784..3519298 Prevotella ruminicola 23 9000728 YP_003576092.1 CDS PRU_2856 NC_014033.1 3519331 3519915 D identified by similarity to GB:AAO77627.1; hypothetical protein 3519331..3519915 Prevotella ruminicola 23 9000126 YP_003576093.1 CDS purE NC_014033.1 3519946 3520452 D identified by match to protein family HMM PF00731; match to protein family HMM TIGR01162; phosphoribosylaminoimidazole carboxylase, catalytic subunit 3519946..3520452 Prevotella ruminicola 23 9000504 YP_003576094.1 CDS ispG NC_014033.1 3520480 3521865 D identified by match to protein family HMM PF04551; match to protein family HMM TIGR00612; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 3520480..3521865 Prevotella ruminicola 23 9002673 YP_003576095.1 CDS npdA NC_014033.1 3521985 3522677 R identified by similarity to SP:P97013; match to protein family HMM PF02146; NAD-dependent deacetylase complement(3521985..3522677) Prevotella ruminicola 23 9001617 YP_003576096.1 CDS fklB NC_014033.1 3522825 3523430 D identified by similarity to SP:P39311; match to protein family HMM PF00254; match to protein family HMM PF01346; FKBP family peptidyl-prolyl cis-trans isomerase 3522825..3523430 Prevotella ruminicola 23 9001192 YP_003576097.1 CDS mip NC_014033.1 3523448 3524326 D identified by similarity to SP:P51752; match to protein family HMM PF00254; match to protein family HMM PF01346; peptidyl-prolyl cis-trans isomerase Mip 3523448..3524326 Prevotella ruminicola 23 9000011 YP_003576098.1 CDS PRU_2862 NC_014033.1 3524329 3525288 D identified by similarity to SP:P39311; match to protein family HMM PF00254; FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase 3524329..3525288 Prevotella ruminicola 23 9002346 YP_003576099.1 CDS PRU_2863 NC_014033.1 3525400 3525879 D identified by match to protein family HMM PF01037; AsnC family transcriptional regulator 3525400..3525879 Prevotella ruminicola 23 9002620 YP_003576100.1 CDS PRU_2864 NC_014033.1 3525876 3527591 D identified by match to protein family HMM PF00117; match to protein family HMM PF01244; match to protein family HMM PF07722; amma-glutamyl hydrolase family peptidase 3525876..3527591 Prevotella ruminicola 23 9001390 YP_003576101.1 CDS PRU_2865 NC_014033.1 3527594 3528583 D identified by match to protein family HMM PF04389; M20/M25/M40 family peptidase 3527594..3528583 Prevotella ruminicola 23 9001095 YP_003576102.1 CDS PRU_2866 NC_014033.1 3528610 3529692 R identified by similarity to GB:AAQ67044.1; hypothetical protein complement(3528610..3529692) Prevotella ruminicola 23 9000299 YP_003576103.1 CDS PRU_2867 NC_014033.1 3529689 3531200 R identified by match to protein family HMM PF01256; match to protein family HMM PF03853; match to protein family HMM TIGR00196; match to protein family HMM TIGR00197; carbohydrate kinase family protein complement(3529689..3531200) Prevotella ruminicola 23 9001532 YP_003576104.1 CDS hpt NC_014033.1 3531292 3531828 D identified by similarity to SP:P36766; match to protein family HMM PF00156; match to protein family HMM TIGR01203; hypoxanthine phosphoribosyltransferase 3531292..3531828 Prevotella ruminicola 23 9002354 YP_003576105.1 CDS adk NC_014033.1 3531859 3532431 D identified by similarity to SP:P27142; match to protein family HMM PF00406; match to protein family HMM TIGR01351; adenylate kinase 3531859..3532431 Prevotella ruminicola 23 8999972 YP_003576106.1 CDS PRU_2870 NC_014033.1 3532432 3533601 D identified by match to protein family HMM PF01018; match to protein family HMM PF01926; match to protein family HMM TIGR00231; match to protein family HMM TIGR02729; GTP1/OBG family GTP-binding protein 3532432..3533601 Prevotella ruminicola 23 9000871 YP_003576107.1 CDS PRU_2872 NC_014033.1 3536321 3537034 D hypothetical protein 3536321..3537034 Prevotella ruminicola 23 9002543 YP_003576108.1 CDS PRU_2873 NC_014033.1 3537055 3538569 D identified by match to protein family HMM PF01336; lipoprotein 3537055..3538569 Prevotella ruminicola 23 9002111 YP_003576109.1 CDS PRU_2874 NC_014033.1 3538608 3539594 D identified by match to protein family HMM PF01223; DNA/RNA non-specific endonuclease 3538608..3539594 Prevotella ruminicola 23 9002083 YP_003576110.1 CDS PRU_2875 NC_014033.1 3539672 3543076 D identified by similarity to GB:AAO76292.1; hypothetical protein 3539672..3543076 Prevotella ruminicola 23 9001882 YP_003576111.1 CDS glyS NC_014033.1 3543217 3544758 D identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00389; glycine--tRNA ligase 3543217..3544758 Prevotella ruminicola 23 9001272 YP_003576112.1 CDS PRU_2877 NC_014033.1 3544762 3545403 D identified by similarity to SP:P51752; match to protein family HMM PF00254; FKBP-type 22 kDa peptidyl-prolyl cis-trans isomerase 3544762..3545403 Prevotella ruminicola 23 9000847 YP_003576113.1 CDS PRU_2879 NC_014033.1 3546359 3547357 D hypothetical protein 3546359..3547357 Prevotella ruminicola 23 9002061 YP_003576114.1 CDS manA NC_014033.1 3547447 3548400 R identified by similarity to SP:P39841; match to protein family HMM PF01238; match to protein family HMM TIGR00218; mannose-6-phosphate isomerase, class I complement(3547447..3548400) Prevotella ruminicola 23 9001458 YP_003576115.1 CDS trkH NC_014033.1 3548419 3549876 R identified by similarity to GB:AAR91792.1; match to protein family HMM PF02386; Trk system potassium uptake protein TrkH complement(3548419..3549876) Prevotella ruminicola 23 9001328 YP_003576116.1 CDS trkA NC_014033.1 3549870 3551225 R identified by similarity to GB:AAR91791.1; match to protein family HMM PF02080; match to protein family HMM PF02254; Trk system potassium uptake protein TrkA complement(3549870..3551225) Prevotella ruminicola 23 9000414 YP_003576117.1 CDS dxs NC_014033.1 3551222 3553120 R identified by similarity to SP:P77488; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00204; 1-deoxy-D-xylulose-5-phosphate synthase complement(3551222..3553120) Prevotella ruminicola 23 9002413 YP_003576118.1 CDS PRU_2884 NC_014033.1 3553198 3553734 R identified by similarity to GB:AAO78272.1; hypothetical protein complement(3553198..3553734) Prevotella ruminicola 23 9000988 YP_003576119.1 CDS PRU_2885 NC_014033.1 3553929 3554033 R lipoprotein complement(3553929..3554033) Prevotella ruminicola 23 9001603 YP_003576120.1 CDS PRU_2886 NC_014033.1 3554160 3554702 R identified by match to protein family HMM TIGR01201; DNA-binding protein complement(3554160..3554702) Prevotella ruminicola 23 9002064 YP_003576121.1 CDS PRU_2887 NC_014033.1 3555544 3557073 D identified by match to protein family HMM PF02384; type I restriction-modification system subunit M 3555544..3557073 Prevotella ruminicola 23 9000629 YP_003576122.1 CDS PRU_2888 NC_014033.1 3557111 3558325 D identified by similarity to GB:AAO77246.1; match to protein family HMM PF06250; hypothetical protein 3557111..3558325 Prevotella ruminicola 23 9001251 YP_003576123.1 CDS PRU_2889 NC_014033.1 3558366 3559544 D identified by match to protein family HMM PF01420; type I restriction-modification system subunit S 3558366..3559544 Prevotella ruminicola 23 9001859 YP_003576124.1 CDS PRU_2890 NC_014033.1 3559892 3563284 D identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04313; match to protein family HMM PF04851; type I restriction-modification system, R subunit 3559892..3563284 Prevotella ruminicola 23 9001397 YP_003576125.1 CDS PRU_2891 NC_014033.1 3563720 3564589 D identified by glimmer; hypothetical protein 3563720..3564589 Prevotella ruminicola 23 9000496 YP_003576126.1 CDS PRU_2892 NC_014033.1 3564803 3565285 D identified by glimmer; hypothetical protein 3564803..3565285 Prevotella ruminicola 23 9002512 YP_003576127.1 CDS PRU_2893 NC_014033.1 3565424 3565765 D identified by glimmer; hypothetical protein 3565424..3565765 Prevotella ruminicola 23 9001718 YP_003576128.1 CDS PRU_2894 NC_014033.1 3566007 3566288 D identified by glimmer; hypothetical protein 3566007..3566288 Prevotella ruminicola 23 9000243 YP_003576129.1 CDS PRU_2895 NC_014033.1 3566364 3566888 D identified by glimmer; hypothetical protein 3566364..3566888 Prevotella ruminicola 23 9002215 YP_003576130.1 CDS PRU_2896 NC_014033.1 3566905 3567348 D identified by glimmer; hypothetical protein 3566905..3567348 Prevotella ruminicola 23 9002569 YP_003576131.1 CDS PRU_2897 NC_014033.1 3567345 3569690 D identified by glimmer; hypothetical protein 3567345..3569690 Prevotella ruminicola 23 9001993 YP_003576132.1 CDS PRU_2898 NC_014033.1 3569727 3570209 D identified by similarity to GB:AAN67722.1; match to protein family HMM PF08291; hypothetical protein 3569727..3570209 Prevotella ruminicola 23 9001250 YP_003576133.1 CDS PRU_2899 NC_014033.1 3570364 3572118 D identified by similarity to GB:AAQ66950.1; hypothetical protein 3570364..3572118 Prevotella ruminicola 23 9000038 YP_003576134.1 CDS PRU_2900 NC_014033.1 3572097 3573275 R identified by similarity to GB:BAA07751.1; match to protein family HMM PF00534; mannosyltransferase complement(3572097..3573275) Prevotella ruminicola 23 9000440 YP_003576135.1 CDS PRU_2901 NC_014033.1 3573247 3573630 R identified by similarity to GB:AAO78496.1; match to protein family HMM PF04138; hypothetical protein complement(3573247..3573630) Prevotella ruminicola 23 9000167 YP_003576136.1 CDS PRU_2902 NC_014033.1 3573711 3574487 D identified by match to protein family HMM PF01522; polysaccharide deacetylase domain-containing protein 3573711..3574487 Prevotella ruminicola 23 9002341 YP_003576137.1 CDS PRU_2903 NC_014033.1 3574507 3575454 D identified by similarity to SP:O22007; match to protein family HMM PF00535; group 2 family glycosyltransferase 3574507..3575454 Prevotella ruminicola 23 9001066 YP_003576138.1 CDS PRU_2904 NC_014033.1 3575438 3576565 D identified by similarity to GB:AAO76859.1; hypothetical protein 3575438..3576565 Prevotella ruminicola 23 9001382 YP_003576139.1 CDS PRU_2905 NC_014033.1 3576511 3577716 R identified by similarity to GB:AAO78495.1; hypothetical protein complement(3576511..3577716) Prevotella ruminicola 23 9000210 YP_003576140.1 CDS PRU_2906 NC_014033.1 3577830 3578864 D identified by similarity to SP:P17731; match to protein family HMM PF00155; class I/II aminotransferase 3577830..3578864 Prevotella ruminicola 23 9002404 YP_003576141.1 CDS PRU_2907 NC_014033.1 3578884 3579612 D nucleotidyltransferase family protein 3578884..3579612 Prevotella ruminicola 23 9002010 YP_003576142.1 CDS PRU_2908 NC_014033.1 3579614 3580495 D identified by match to protein family HMM PF00535; group 2 family glycosyltransferase 3579614..3580495 Prevotella ruminicola 23 9002003 YP_003576143.1 CDS PRU_2909 NC_014033.1 3580492 3581325 R identified by similarity to GB:AAD37094.1; match to protein family HMM PF04991; LicD family protein complement(3580492..3581325) Prevotella ruminicola 23 9001218 YP_003576144.1 CDS PRU_2910 NC_014033.1 3581432 3582406 D identified by match to protein family HMM PF03279; lipid A biosynthesis acyltransferase 3581432..3582406 Prevotella ruminicola 23 9000395 YP_003576145.1 CDS PRU_2911 NC_014033.1 3582403 3584283 R identified by match to protein family HMM PF00884; overlaps another CDS with the same product name; sulfatase family protein complement(3582403..3584283) Prevotella ruminicola 23 9002742 YP_003576146.1 CDS PRU_2912 NC_014033.1 3584280 3586091 R identified by match to protein family HMM PF00884; overlaps another CDS with the same product name; sulfatase family protein complement(3584280..3586091) Prevotella ruminicola 23 9001967 YP_003576147.1 CDS msbA NC_014033.1 3586075 3587901 R identified by similarity to SP:P60752; match to protein family HMM PF00005; match to protein family HMM PF00664; lipid A export permease/ATP-binding protein complement(3586075..3587901) Prevotella ruminicola 23 9001832 YP_003576148.1 CDS miaB NC_014033.1 3587921 3589333 R identified by match to protein family HMM PF00919; match to protein family HMM PF01938; match to protein family HMM PF04055; match to protein family HMM TIGR00089; match to protein family HMM TIGR01574; tRNA-i(6)A37 thiotransferase enzyme MiaB complement(3587921..3589333) Prevotella ruminicola 23 9001332 YP_003576149.1 CDS PRU_2915 NC_014033.1 3589275 3590615 R identified by similarity to SP:P15723; match to protein family HMM TIGR01353; deoxyguanosinetriphosphate triphosphohydrolase complement(3589275..3590615) Prevotella ruminicola 23 9000246 YP_003576150.1 CDS dut NC_014033.1 3590764 3591201 D identified by match to protein family HMM PF00692; match to protein family HMM TIGR00576; dUTP diphosphatase 3590764..3591201 Prevotella ruminicola 23 9002269 YP_003576151.1 CDS PRU_2917 NC_014033.1 3591209 3592807 D identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 3591209..3592807 Prevotella ruminicola 23 9000821 YP_003576152.1 CDS PRU_2918 NC_014033.1 3592807 3593670 D lipoprotein 3592807..3593670 Prevotella ruminicola 23 9000039 YP_003576153.1 CDS PRU_2919 NC_014033.1 3593688 3595292 D identified by match to protein family HMM PF01551; match to protein family HMM PF06519; tolA protein 3593688..3595292 Prevotella ruminicola 23 9001725 YP_003576154.1 CDS PRU_2920 NC_014033.1 3595340 3596404 R identified by similarity to SP:P23908; match to protein family HMM PF01546; match to protein family HMM PF07687; acetylornithine deacetylase complement(3595340..3596404) Prevotella ruminicola 23 9001262 YP_003576155.1 CDS PRU_2921 NC_014033.1 3596408 3597403 R identified by match to protein family HMM PF03741; match to protein family HMM TIGR03718; tellurium resistance protein TerC complement(3596408..3597403) Prevotella ruminicola 23 9001809 YP_003576156.1 CDS PRU_2922 NC_014033.1 3597476 3598672 D identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360; ComEC/Rec2-like protein 3597476..3598672 Prevotella ruminicola 23 9002419 YP_003576157.1 CDS PRU_2923 NC_014033.1 3598626 3599537 R identified by match to protein family HMM PF03547; auxin efflux carrier family protein complement(3598626..3599537) Prevotella ruminicola 23 9000239 YP_003576158.1 CDS PRU_2924 NC_014033.1 3599582 3600967 R identified by match to protein family HMM PF02163; membrane-associated zinc metalloprotease complement(3599582..3600967) Prevotella ruminicola 23 9000867 YP_003576159.1 CDS dxr NC_014033.1 3600974 3602131 R identified by match to protein family HMM PF02670; match to protein family HMM PF08436; match to protein family HMM TIGR00243; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(3600974..3602131) Prevotella ruminicola 23 9001284 YP_003576160.1 CDS rimM NC_014033.1 3602128 3602673 R identified by match to protein family HMM PF01782; match to protein family HMM TIGR02273; 16S rRNA processing protein RimM complement(3602128..3602673) Prevotella ruminicola 23 9002071 YP_003576161.1 CDS murA NC_014033.1 3602642 3603946 R identified by similarity to SP:P33986; match to protein family HMM PF00275; match to protein family HMM TIGR01072; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(3602642..3603946) Prevotella ruminicola 23 9001549 YP_003576162.1 CDS PRU_2928 NC_014033.1 3603952 3604542 R identified by similarity to GB:AAO77113.1; hypothetical protein complement(3603952..3604542) Prevotella ruminicola 23 9001947 YP_003576163.1 CDS PRU_2929 NC_014033.1 3604574 3605263 R identified by match to protein family HMM PF00814; match to protein family HMM TIGR03725; M22 family peptidase complement(3604574..3605263) Prevotella ruminicola 23 9001159 YP_003576164.1 CDS PRU_2935 NC_014033.1 3611044 3612159 D identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase 3611044..3612159 Prevotella ruminicola 23 9002763 YP_003576165.1 CDS PRU_2936 NC_014033.1 3612306 3612827 D identified by similarity to GB:BAD50833.1; hypothetical protein 3612306..3612827 Prevotella ruminicola 23 9002298 YP_003576166.1 CDS rpmF NC_014033.1 3612851 3613042 D identified by similarity to SP:P07840; match to protein family HMM PF01783; match to protein family HMM TIGR01031; 50S ribosomal protein L32 3612851..3613042 Prevotella ruminicola 23 9001522 YP_003576167.1 CDS fabH NC_014033.1 3613042 3614046 D identified by match to protein family HMM PF08541; match to protein family HMM PF08545; match to protein family HMM TIGR00747; 3-oxoacyl-(acyl-carrier-protein) synthase III 3613042..3614046 Prevotella ruminicola 23 9000670 YP_003576168.1 CDS era NC_014033.1 3614079 3614966 D identified by similarity to SP:P42182; match to protein family HMM PF01926; match to protein family HMM PF07650; match to protein family HMM TIGR00231; match to protein family HMM TIGR00436; GTP-binding protein Era 3614079..3614966 Prevotella ruminicola 23 9001331 YP_003576169.1 CDS engA NC_014033.1 3615013 3616326 D identified by match to protein family HMM PF01926; match to protein family HMM PF08477; match to protein family HMM TIGR00231; match to protein family HMM TIGR03594; ribosome-associated GTPase EngA 3615013..3616326 Prevotella ruminicola 23 9000508 YP_003576170.1 CDS PRU_2941 NC_014033.1 3616326 3616712 D lipoprotein 3616326..3616712 Prevotella ruminicola 23 9001305 YP_003576171.1 CDS PRU_2942 NC_014033.1 3616835 3617815 D identified by glimmer; hypothetical protein 3616835..3617815 Prevotella ruminicola 23 9000474 YP_003576172.1 CDS PRU_2943 NC_014033.1 3618888 3619151 R identified by similarity to PIR:D83587; hypothetical protein complement(3618888..3619151) Prevotella ruminicola 23 9002428 PRU_0005 tRNA PRU_0005 NC_014033.1 7072 7152 R tRNA-Leu complement(7072..7152) Prevotella ruminicola 23 9000386 PRU_0037 tRNA PRU_0037 NC_014033.1 46619 46696 D tRNA-Val 46619..46696 Prevotella ruminicola 23 9000019 PRU_0042 tRNA PRU_0042 NC_014033.1 51917 51990 R tRNA-Gln complement(51917..51990) Prevotella ruminicola 23 9000501 PRU_0057 tRNA PRU_0057 NC_014033.1 68461 68538 R tRNA-Val complement(68461..68538) Prevotella ruminicola 23 9000442 PRU_0183 tRNA PRU_0183 NC_014033.1 225567 225640 D tRNA-Ile 225567..225640 Prevotella ruminicola 23 9002756 PRU_0184 tRNA PRU_0184 NC_014033.1 225666 225742 D tRNA-Ala 225666..225742 Prevotella ruminicola 23 9002799 PRU_0189 tRNA PRU_0189 NC_014033.1 230778 230851 R tRNA-Thr complement(230778..230851) Prevotella ruminicola 23 8999993 PRU_0289 tRNA PRU_0289 NC_014033.1 350662 350733 R tRNA-Arg complement(350662..350733) Prevotella ruminicola 23 9001108 PRU_0292 tRNA PRU_0292 NC_014033.1 353613 353700 R tRNA-Ser complement(353613..353700) Prevotella ruminicola 23 9000857 PRU_0295 tRNA PRU_0295 NC_014033.1 357217 357292 R tRNA-Met complement(357217..357292) Prevotella ruminicola 23 9002105 PRU_0312 tRNA PRU_0312 NC_014033.1 378974 379046 D tRNA-Phe 378974..379046 Prevotella ruminicola 23 9000326 PRU_0461 tRNA PRU_0461 NC_014033.1 552755 552826 R tRNA-Cys complement(552755..552826) Prevotella ruminicola 23 9001256 PRU_0464 tRNA PRU_0464 NC_014033.1 555675 555750 D tRNA-Pro 555675..555750 Prevotella ruminicola 23 9002414 PRU_0536 tRNA PRU_0536 NC_014033.1 639544 639622 R tRNA-His complement(639544..639622) Prevotella ruminicola 23 9000219 PRU_0640 tRNA PRU_0640 NC_014033.1 752267 752340 D tRNA-Ile 752267..752340 Prevotella ruminicola 23 9002764 PRU_0641 tRNA PRU_0641 NC_014033.1 752389 752465 D tRNA-Ala 752389..752465 Prevotella ruminicola 23 9002806 PRU_0768 tRNA PRU_0768 NC_014033.1 900968 901057 D tRNA-Ser 900968..901057 Prevotella ruminicola 23 9002502 PRU_0769 tRNA PRU_0769 NC_014033.1 901089 901163 D tRNA-Glu 901089..901163 Prevotella ruminicola 23 9002769 PRU_0770 tRNA PRU_0770 NC_014033.1 901199 901273 D tRNA-Glu 901199..901273 Prevotella ruminicola 23 9002815 PRU_0883 tRNA PRU_0883 NC_014033.1 1037559 1037631 R tRNA-Gly complement(1037559..1037631) Prevotella ruminicola 23 9001990 PRU_0884 tRNA PRU_0884 NC_014033.1 1037651 1037737 R tRNA-Leu complement(1037651..1037737) Prevotella ruminicola 23 9002791 PRU_0885 tRNA PRU_0885 NC_014033.1 1037761 1037842 R tRNA-Leu complement(1037761..1037842) Prevotella ruminicola 23 9002809 PRU_0886 tRNA PRU_0886 NC_014033.1 1037893 1037965 R tRNA-Gly complement(1037893..1037965) Prevotella ruminicola 23 9002800 PRU_0892 tRNA PRU_0892 NC_014033.1 1046861 1046934 R tRNA-Asp complement(1046861..1046934) Prevotella ruminicola 23 9001585 PRU_0893 tRNA PRU_0893 NC_014033.1 1046966 1047042 R tRNA-Asp complement(1046966..1047042) Prevotella ruminicola 23 9002816 PRU_0909 tRNA PRU_0909 NC_014033.1 1062935 1063007 D tRNA-Lys 1062935..1063007 Prevotella ruminicola 23 9001172 PRU_0910 tRNA PRU_0910 NC_014033.1 1063050 1063125 D tRNA-Lys 1063050..1063125 Prevotella ruminicola 23 9002817 PRU_0977 tRNA PRU_0977 NC_014033.1 1138631 1138703 D tRNA-Thr 1138631..1138703 Prevotella ruminicola 23 9000530 PRU_0978 tRNA PRU_0978 NC_014033.1 1138738 1138808 D tRNA-Gly 1138738..1138808 Prevotella ruminicola 23 9002787 PRU_1032 tRNA PRU_1032 NC_014033.1 1206874 1206964 D tRNA-Ser 1206874..1206964 Prevotella ruminicola 23 9001174 PRU_1074 tRNA PRU_1074 NC_014033.1 1258114 1258190 D tRNA-Arg 1258114..1258190 Prevotella ruminicola 23 9001412 PRU_1221 tRNA PRU_1221 NC_014033.1 1447003 1447079 R tRNA-Arg complement(1447003..1447079) Prevotella ruminicola 23 9000890 PRU_1222 tRNA PRU_1222 NC_014033.1 1447107 1447183 R tRNA-Arg complement(1447107..1447183) Prevotella ruminicola 23 9002771 PRU_1555 tRNA PRU_1555 NC_014033.1 1854914 1854999 R tRNA-Tyr complement(1854914..1854999) Prevotella ruminicola 23 9000908 PRU_1823 tRNA PRU_1823 NC_014033.1 2200429 2200516 R tRNA-Ser complement(2200429..2200516) Prevotella ruminicola 23 9000678 PRU_1866 tRNA PRU_1866 NC_014033.1 2246260 2246332 R tRNA-Lys complement(2246260..2246332) Prevotella ruminicola 23 9001755 PRU_1904 tRNA PRU_1904 NC_014033.1 2295872 2295944 D tRNA-Pro 2295872..2295944 Prevotella ruminicola 23 9000155 PRU_1910 tRNA PRU_1910 NC_014033.1 2301528 2301604 R tRNA-Met complement(2301528..2301604) Prevotella ruminicola 23 9001347 PRU_2142 tRNA PRU_2142 NC_014033.1 2569250 2569325 R tRNA-Trp complement(2569250..2569325) Prevotella ruminicola 23 9000841 PRU_2144 tRNA PRU_2144 NC_014033.1 2570660 2570731 R tRNA-Thr complement(2570660..2570731) Prevotella ruminicola 23 9000005 PRU_2145 tRNA PRU_2145 NC_014033.1 2570739 2570814 R tRNA-Gly complement(2570739..2570814) Prevotella ruminicola 23 9002797 PRU_2146 tRNA PRU_2146 NC_014033.1 2570827 2570912 R tRNA-Tyr complement(2570827..2570912) Prevotella ruminicola 23 9002811 PRU_2147 tRNA PRU_2147 NC_014033.1 2571005 2571081 R tRNA-Thr complement(2571005..2571081) Prevotella ruminicola 23 9002818 PRU_2193 tRNA PRU_2193 NC_014033.1 2635644 2635720 R tRNA-Ala complement(2635644..2635720) Prevotella ruminicola 23 9002757 PRU_2194 tRNA PRU_2194 NC_014033.1 2635746 2635819 R tRNA-Ile complement(2635746..2635819) Prevotella ruminicola 23 9002807 PRU_2266 tRNA PRU_2266 NC_014033.1 2731196 2731271 D tRNA-Pro 2731196..2731271 Prevotella ruminicola 23 9002690 PRU_2300 tRNA PRU_2300 NC_014033.1 2772360 2772433 D tRNA-Gln 2772360..2772433 Prevotella ruminicola 23 9001844 PRU_2306 tRNA PRU_2306 NC_014033.1 2779099 2779173 R tRNA-OTHER complement(2779099..2779173) Prevotella ruminicola 23 9001968 PRU_2338 tRNA PRU_2338 NC_014033.1 2822106 2822180 D tRNA-OTHER 2822106..2822180 Prevotella ruminicola 23 9001605 PRU_2367 tRNA PRU_2367 NC_014033.1 2860308 2860381 R tRNA-Asn complement(2860308..2860381) Prevotella ruminicola 23 9001636 PRU_2391 tRNA PRU_2391 NC_014033.1 2886493 2886578 R tRNA-Leu complement(2886493..2886578) Prevotella ruminicola 23 9002242 PRU_2616 tRNA PRU_2616 NC_014033.1 3176076 3176152 R tRNA-Met complement(3176076..3176152) Prevotella ruminicola 23 9001673 PRU_2759 tRNA PRU_2759 NC_014033.1 3405562 3405646 D tRNA-Leu 3405562..3405646 Prevotella ruminicola 23 9000034 PRU_2931 tRNA PRU_2931 NC_014033.1 3607480 3607553 D tRNA-Ile 3607480..3607553 Prevotella ruminicola 23 9002758 PRU_2932 tRNA PRU_2932 NC_014033.1 3607602 3607678 D tRNA-Ala 3607602..3607678 Prevotella ruminicola 23 9002814 PRU_0182 rRNA rrsA NC_014033.1 223917 225405 D 16S ribosomal RNA 223917..225405 Prevotella ruminicola 23 9000438 PRU_0185 rRNA rrlA NC_014033.1 225944 228775 D 23S ribosomal RNA 225944..228775 Prevotella ruminicola 23 9002774 PRU_0186 rRNA rrfA NC_014033.1 228912 229022 D 5S ribosomal RNA 228912..229022 Prevotella ruminicola 23 9002767 PRU_0639 rRNA rrsB NC_014033.1 750628 752116 D 16S ribosomal RNA 750628..752116 Prevotella ruminicola 23 9001804 PRU_0642 rRNA rrlB NC_014033.1 752691 755522 D 23S ribosomal RNA 752691..755522 Prevotella ruminicola 23 9002773 PRU_0643 rRNA rrfB NC_014033.1 755722 755832 D 5S ribosomal RNA 755722..755832 Prevotella ruminicola 23 9002762 PRU_2191 rRNA rrfC NC_014033.1 2632363 2632473 R 5S ribosomal RNA complement(2632363..2632473) Prevotella ruminicola 23 9000810 PRU_2192 rRNA rrlC NC_014033.1 2632610 2635441 R 23S ribosomal RNA complement(2632610..2635441) Prevotella ruminicola 23 9002760 PRU_2195 rRNA rrsC NC_014033.1 2635968 2637456 R 16S ribosomal RNA complement(2635968..2637456) Prevotella ruminicola 23 9002802 PRU_2930 rRNA rrsD NC_014033.1 3605770 3607258 D 16S ribosomal RNA 3605770..3607258 Prevotella ruminicola 23 9000268 PRU_2933 rRNA rrlD NC_014033.1 3607904 3610735 D 23S ribosomal RNA 3607904..3610735 Prevotella ruminicola 23 9002789 PRU_2934 rRNA rrfD NC_014033.1 3610872 3610982 D 5S ribosomal RNA 3610872..3610982 Prevotella ruminicola 23 9002765